# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SBP_bac_5 PF00496.22 gi|21226103|ref|NP_632025.1| - 2.1e-80 270.5 6.2 2.9e-80 270.1 6.2 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle SBP_bac_5 PF00496.22 gi|21226104|ref|NP_632026.1| - 2.8e-71 240.5 8.8 3.5e-71 240.2 8.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF3872 PF12988.7 gi|21226104|ref|NP_632026.1| - 0.11 12.3 0.1 0.6 9.9 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3872) BPD_transp_1 PF00528.22 gi|21226106|ref|NP_632028.1| - 1.9e-40 138.5 10.5 3.5e-40 137.7 10.5 1.4 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|21226107|ref|NP_632029.1| - 8.8e-22 77.7 11.7 8.8e-22 77.7 11.7 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|21226108|ref|NP_632030.1| - 4.9e-22 78.9 0.0 7.1e-22 78.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|21226108|ref|NP_632030.1| - 6e-10 39.5 0.0 1.3e-09 38.4 0.0 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|21226108|ref|NP_632030.1| - 3.3e-05 24.2 0.0 0.00011 22.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|21226108|ref|NP_632030.1| - 0.00024 20.6 0.3 0.028 13.8 0.3 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 gi|21226108|ref|NP_632030.1| - 0.00071 19.0 0.2 0.0019 17.6 0.2 1.7 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 gi|21226108|ref|NP_632030.1| - 0.0043 16.8 0.1 0.0079 15.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|21226108|ref|NP_632030.1| - 0.0093 16.4 0.0 0.013 15.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain NB-ARC PF00931.22 gi|21226108|ref|NP_632030.1| - 0.03 13.5 0.1 0.28 10.4 0.1 2.0 2 0 0 2 2 2 0 NB-ARC domain AAA_21 PF13304.6 gi|21226108|ref|NP_632030.1| - 0.041 13.7 0.1 6.5 6.5 0.0 2.2 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_33 PF13671.6 gi|21226108|ref|NP_632030.1| - 0.076 13.2 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|21226108|ref|NP_632030.1| - 0.1 12.5 0.1 0.19 11.6 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 gi|21226109|ref|NP_632031.1| - 2.8e-25 89.4 0.0 3.9e-25 89.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|21226109|ref|NP_632031.1| - 3.6e-05 24.0 0.2 9.7e-05 22.7 0.2 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|21226109|ref|NP_632031.1| - 7.6e-05 22.3 0.6 0.0036 16.8 0.0 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|21226109|ref|NP_632031.1| - 0.0008 19.4 0.8 0.0031 17.4 0.2 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_21 PF13304.6 gi|21226109|ref|NP_632031.1| - 0.0037 17.1 0.0 0.089 12.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21226109|ref|NP_632031.1| - 0.0039 16.9 2.2 0.0052 16.5 0.2 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|21226109|ref|NP_632031.1| - 0.0075 16.8 0.0 0.015 15.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain TniB PF05621.11 gi|21226109|ref|NP_632031.1| - 0.014 14.8 0.1 2.3 7.6 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein PduV-EutP PF10662.9 gi|21226109|ref|NP_632031.1| - 0.021 14.6 0.5 0.047 13.4 0.1 1.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_30 PF13604.6 gi|21226109|ref|NP_632031.1| - 0.026 14.2 0.1 0.098 12.4 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|21226109|ref|NP_632031.1| - 0.033 14.6 0.0 0.04 14.3 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain NTPase_1 PF03266.15 gi|21226109|ref|NP_632031.1| - 0.075 12.9 0.7 8.5 6.3 0.1 2.1 2 0 0 2 2 2 0 NTPase AAA PF00004.29 gi|21226109|ref|NP_632031.1| - 0.076 13.4 0.3 0.19 12.2 0.3 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|21226109|ref|NP_632031.1| - 0.076 13.1 0.2 0.16 12.0 0.2 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase CLP1_P PF16575.5 gi|21226109|ref|NP_632031.1| - 0.079 12.7 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop KAP_NTPase PF07693.14 gi|21226109|ref|NP_632031.1| - 0.09 12.0 0.0 0.12 11.6 0.0 1.4 1 1 0 1 1 1 0 KAP family P-loop domain CoaE PF01121.20 gi|21226109|ref|NP_632031.1| - 0.11 12.2 0.3 1.1 8.9 0.1 2.1 2 0 0 2 2 2 0 Dephospho-CoA kinase DLIC PF05783.11 gi|21226109|ref|NP_632031.1| - 0.11 11.3 0.3 0.52 9.1 0.1 1.8 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) CsiD PF08943.10 gi|21226109|ref|NP_632031.1| - 0.13 11.3 0.1 0.17 10.9 0.1 1.2 1 0 0 1 1 1 0 CsiD AAA_23 PF13476.6 gi|21226109|ref|NP_632031.1| - 0.19 12.2 0.3 0.79 10.2 0.3 2.1 1 1 0 1 1 1 0 AAA domain DUF389 PF04087.14 gi|21226110|ref|NP_632032.1| - 1.6e-36 125.4 17.6 1.6e-36 125.4 17.6 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF389) SCIMP PF15050.6 gi|21226110|ref|NP_632032.1| - 0.046 14.2 0.0 0.11 12.9 0.0 1.6 1 0 0 1 1 1 0 SCIMP protein G0-G1_switch_2 PF15103.6 gi|21226110|ref|NP_632032.1| - 0.097 13.1 0.1 0.19 12.2 0.1 1.5 1 0 0 1 1 1 0 G0/G1 switch protein 2 DUF3157 PF11355.8 gi|21226110|ref|NP_632032.1| - 0.1 12.2 0.1 0.21 11.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3157) DUF4330 PF14221.6 gi|21226110|ref|NP_632032.1| - 0.11 12.7 0.9 0.3 11.3 0.9 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) DUF5429 PF17494.2 gi|21226110|ref|NP_632032.1| - 0.12 12.4 1.3 0.3 11.1 0.4 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5429) DUF389 PF04087.14 gi|21226111|ref|NP_632033.1| - 8.7e-35 119.8 20.5 9.5e-35 119.7 15.9 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF389) DUF5429 PF17494.2 gi|21226111|ref|NP_632033.1| - 0.12 12.4 0.9 0.33 11.0 0.9 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5429) DUF1699 PF08004.11 gi|21226113|ref|NP_632035.1| - 2.8e-62 208.2 0.5 3.1e-62 208.0 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) PAM2 PF07145.15 gi|21226113|ref|NP_632035.1| - 0.13 12.0 0.2 19 5.2 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region DUF4394 PF14339.6 gi|21226113|ref|NP_632035.1| - 0.14 11.5 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) DUF1428 PF07237.11 gi|21226114|ref|NP_632036.1| - 3.3e-37 126.8 1.2 3.9e-37 126.6 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1428) NIPSNAP PF07978.13 gi|21226114|ref|NP_632036.1| - 0.031 14.5 0.0 0.047 13.9 0.0 1.3 1 0 0 1 1 1 0 NIPSNAP Rax2 PF12768.7 gi|21226115|ref|NP_632037.1| - 0.015 14.8 0.1 0.023 14.1 0.1 1.2 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Prenyltransf PF01255.19 gi|21226116|ref|NP_632038.1| - 1.3e-20 73.9 0.0 1.8e-20 73.4 0.0 1.2 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Methyltransf_25 PF13649.6 gi|21226117|ref|NP_632039.1| - 9.5e-22 77.5 0.3 1.5e-21 76.9 0.3 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21226117|ref|NP_632039.1| - 3.9e-20 72.3 0.2 6.1e-20 71.7 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21226117|ref|NP_632039.1| - 1.9e-18 66.7 0.0 2.4e-18 66.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|21226117|ref|NP_632039.1| - 3.6e-18 66.0 0.0 5.2e-18 65.5 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_12 PF08242.12 gi|21226117|ref|NP_632039.1| - 2.4e-16 60.3 0.1 3.4e-16 59.8 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21226117|ref|NP_632039.1| - 1.2e-13 51.3 0.0 1.5e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21226117|ref|NP_632039.1| - 8.4e-10 38.4 0.0 9.7e-10 38.2 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase TehB PF03848.14 gi|21226117|ref|NP_632039.1| - 1.2e-09 37.9 0.0 1.4e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB Ubie_methyltran PF01209.18 gi|21226117|ref|NP_632039.1| - 2.1e-08 33.8 0.1 2.7e-08 33.4 0.1 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|21226117|ref|NP_632039.1| - 3.1e-08 33.3 0.0 4.3e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|21226117|ref|NP_632039.1| - 6.2e-06 25.8 0.0 7.9e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) NodS PF05401.11 gi|21226117|ref|NP_632039.1| - 0.00023 20.9 0.0 0.00029 20.5 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_4 PF02390.17 gi|21226117|ref|NP_632039.1| - 0.00024 20.6 0.3 0.00093 18.7 0.3 1.8 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_15 PF09445.10 gi|21226117|ref|NP_632039.1| - 0.0003 20.4 0.1 0.00055 19.6 0.1 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MetW PF07021.12 gi|21226117|ref|NP_632039.1| - 0.0011 18.6 0.1 0.0015 18.2 0.1 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 gi|21226117|ref|NP_632039.1| - 0.0021 18.0 0.2 0.003 17.5 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|21226117|ref|NP_632039.1| - 0.0051 16.8 0.0 0.0075 16.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21226117|ref|NP_632039.1| - 0.008 15.9 0.2 0.013 15.3 0.1 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AdoMet_MTase PF07757.13 gi|21226117|ref|NP_632039.1| - 0.018 15.4 0.0 0.03 14.7 0.0 1.3 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase UPF0020 PF01170.18 gi|21226117|ref|NP_632039.1| - 0.06 13.0 0.1 0.14 11.8 0.1 1.6 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 CtaG_Cox11 PF04442.14 gi|21226117|ref|NP_632039.1| - 0.13 12.3 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 eIF-1a PF01176.19 gi|21226118|ref|NP_632040.1| - 6.7e-11 41.8 1.0 8.2e-11 41.6 1.0 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DUF1317 PF07026.11 gi|21226118|ref|NP_632040.1| - 0.13 12.1 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1317) Methyltransf_25 PF13649.6 gi|21226119|ref|NP_632041.1| - 9.2e-21 74.4 0.0 9.3e-20 71.1 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21226119|ref|NP_632041.1| - 1.4e-20 73.7 0.0 5.6e-20 71.8 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21226119|ref|NP_632041.1| - 2.3e-18 66.4 0.0 6e-18 65.1 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21226119|ref|NP_632041.1| - 8.5e-18 64.5 0.0 1.6e-17 63.6 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|21226119|ref|NP_632041.1| - 5.4e-14 52.7 0.0 1.6e-13 51.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21226119|ref|NP_632041.1| - 1.3e-13 51.1 0.0 2e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21226119|ref|NP_632041.1| - 1.2e-06 28.4 0.0 2e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 gi|21226119|ref|NP_632041.1| - 0.00016 21.2 0.0 0.00038 20.0 0.0 1.7 1 1 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|21226119|ref|NP_632041.1| - 0.00023 20.8 0.0 0.00073 19.1 0.0 1.8 2 1 1 3 3 3 1 Methyltransferase small domain CMAS PF02353.20 gi|21226119|ref|NP_632041.1| - 0.00027 20.3 0.0 0.00038 19.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase GCD14 PF08704.10 gi|21226119|ref|NP_632041.1| - 0.0068 16.1 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_8 PF05148.15 gi|21226119|ref|NP_632041.1| - 0.0068 16.3 0.0 0.13 12.1 0.0 2.1 2 0 0 2 2 2 1 Hypothetical methyltransferase Methyltransf_3 PF01596.17 gi|21226119|ref|NP_632041.1| - 0.018 14.3 0.0 0.025 13.7 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase PrmA PF06325.13 gi|21226119|ref|NP_632041.1| - 0.1 12.0 0.0 0.21 10.9 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) GidB PF02527.15 gi|21226119|ref|NP_632041.1| - 0.13 11.6 0.0 0.37 10.1 0.0 1.7 2 0 0 2 2 2 0 rRNA small subunit methyltransferase G Fibrillarin PF01269.17 gi|21226119|ref|NP_632041.1| - 0.15 11.2 0.0 0.23 10.5 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin Pox_MCEL PF03291.16 gi|21226119|ref|NP_632041.1| - 0.18 10.9 0.0 2.6 7.1 0.0 2.1 1 1 0 1 1 1 0 mRNA capping enzyme AAA_14 PF13173.6 gi|21226121|ref|NP_632043.1| - 8.8e-39 132.5 0.0 1.7e-38 131.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|21226121|ref|NP_632043.1| - 5.3e-10 39.5 0.1 8.7e-10 38.8 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|21226121|ref|NP_632043.1| - 1e-05 25.6 0.5 0.00085 19.3 0.0 2.4 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|21226121|ref|NP_632043.1| - 0.006 16.9 0.0 0.78 10.0 0.0 2.5 1 1 1 2 2 2 1 AAA domain Beta_protein PF14350.6 gi|21226121|ref|NP_632043.1| - 0.18 11.2 0.0 0.28 10.5 0.0 1.2 1 0 0 1 1 1 0 Beta protein HTH_36 PF13730.6 gi|21226121|ref|NP_632043.1| - 0.37 10.8 2.6 0.25 11.3 0.3 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HEAT_2 PF13646.6 gi|21226122|ref|NP_632044.1| - 8.6e-15 54.9 0.0 8.3e-07 29.3 0.1 3.3 2 1 1 3 3 3 3 HEAT repeats HEAT PF02985.22 gi|21226122|ref|NP_632044.1| - 4.2e-10 39.0 0.0 0.18 12.2 0.0 5.2 5 0 0 5 5 5 3 HEAT repeat Adaptin_N PF01602.20 gi|21226122|ref|NP_632044.1| - 2.7e-06 26.2 0.0 0.00042 19.0 0.0 2.9 1 1 1 2 2 2 2 Adaptin N terminal region Cnd1 PF12717.7 gi|21226122|ref|NP_632044.1| - 3.1e-05 24.1 0.9 2.2 8.3 0.1 3.8 1 1 2 3 3 3 3 non-SMC mitotic condensation complex subunit 1 V-ATPase_H_N PF03224.14 gi|21226122|ref|NP_632044.1| - 0.0046 16.3 0.8 9.9 5.3 0.0 4.0 1 1 2 4 4 4 1 V-ATPase subunit H CLASP_N PF12348.8 gi|21226122|ref|NP_632044.1| - 0.014 15.0 0.0 8.6 5.9 0.0 3.0 2 1 2 4 4 4 0 CLASP N terminal PPP1R35_C PF15503.6 gi|21226122|ref|NP_632044.1| - 0.037 13.8 0.0 1.4 8.8 0.0 2.7 2 1 0 2 2 2 0 Protein phosphatase 1 regulatory subunit 35 C-terminus DNA_alkylation PF08713.11 gi|21226122|ref|NP_632044.1| - 0.055 13.2 4.0 0.24 11.1 0.3 2.5 1 1 1 2 2 2 0 DNA alkylation repair enzyme HEAT_EZ PF13513.6 gi|21226122|ref|NP_632044.1| - 0.082 13.4 0.1 5.4 7.6 0.0 3.4 3 1 1 4 4 4 0 HEAT-like repeat Lebercilin PF15619.6 gi|21226122|ref|NP_632044.1| - 0.15 11.7 0.4 4.2 7.0 0.1 2.6 2 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease zinc_ribbon_6 PF14599.6 gi|21226123|ref|NP_632045.1| - 0.0073 16.3 0.9 0.019 15.0 0.8 1.7 1 1 0 1 1 1 1 Zinc-ribbon Zn_ribbon_SprT PF17283.2 gi|21226123|ref|NP_632045.1| - 0.012 15.5 0.6 0.019 14.9 0.6 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain HicB_lk_antitox PF15919.5 gi|21226124|ref|NP_632046.1| - 1.2e-12 48.1 0.1 1.3e-12 47.9 0.1 1.1 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF1902 PF08972.11 gi|21226124|ref|NP_632046.1| - 0.0073 16.3 0.0 0.0094 15.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) FANCI_S1-cap PF14674.6 gi|21226124|ref|NP_632046.1| - 0.013 15.6 0.0 0.018 15.1 0.0 1.4 1 0 0 1 1 1 0 FANCI solenoid 1 cap HicA_toxin PF07927.12 gi|21226125|ref|NP_632047.1| - 7.7e-16 57.9 0.3 8.9e-16 57.7 0.3 1.1 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, GnsAB_toxin PF08178.11 gi|21226126|ref|NP_632048.1| - 0.064 13.2 0.5 0.12 12.3 0.1 1.6 2 0 0 2 2 2 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system P4Ha_N PF08336.11 gi|21226128|ref|NP_632050.1| - 0.055 13.5 0.2 0.1 12.6 0.2 1.4 1 0 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region PuR_N PF09182.10 gi|21226128|ref|NP_632050.1| - 0.06 13.3 0.1 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 Bacterial purine repressor, N-terminal HTH_5 PF01022.20 gi|21226128|ref|NP_632050.1| - 0.1 12.5 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family KilA-N PF04383.13 gi|21226128|ref|NP_632050.1| - 0.12 12.2 0.2 2.7 7.9 0.2 2.5 2 1 0 2 2 2 0 KilA-N domain UvrD-helicase PF00580.21 gi|21226130|ref|NP_632052.1| - 4e-44 151.4 12.9 4e-44 151.4 12.9 3.0 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|21226130|ref|NP_632052.1| - 1.1e-24 87.4 0.0 5.9e-24 85.1 0.0 2.2 2 1 0 2 2 2 1 AAA domain UvrD_C PF13361.6 gi|21226130|ref|NP_632052.1| - 3.9e-17 62.7 22.1 4.8e-17 62.4 0.0 4.1 2 2 1 3 3 3 2 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 gi|21226130|ref|NP_632052.1| - 6.5e-10 38.7 0.9 0.0013 18.5 0.0 2.8 3 0 0 3 3 3 2 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|21226130|ref|NP_632052.1| - 5.6e-08 32.7 0.0 3.4e-05 23.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain ResIII PF04851.15 gi|21226130|ref|NP_632052.1| - 2.3e-05 24.4 4.2 0.00039 20.5 1.1 2.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_11 PF13086.6 gi|21226130|ref|NP_632052.1| - 0.00029 20.7 2.8 0.0023 17.8 0.6 2.8 2 1 0 2 2 2 1 AAA domain DEAD PF00270.29 gi|21226130|ref|NP_632052.1| - 0.012 15.4 0.6 0.045 13.5 0.1 2.1 2 0 0 2 2 2 0 DEAD/DEAH box helicase Mannitol_dh PF01232.23 gi|21226130|ref|NP_632052.1| - 0.024 14.8 0.7 0.13 12.4 0.0 2.5 3 0 0 3 3 3 0 Mannitol dehydrogenase Rossmann domain Viral_helicase1 PF01443.18 gi|21226130|ref|NP_632052.1| - 0.044 13.5 4.3 1.7 8.3 0.0 4.5 4 1 2 6 6 6 0 Viral (Superfamily 1) RNA helicase BclA_C PF18573.1 gi|21226131|ref|NP_632053.1| - 0.077 12.9 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 BclA C-terminal domain TPR_2 PF07719.17 gi|21226132|ref|NP_632054.1| - 9.3e-09 34.7 17.4 0.011 15.8 0.4 6.9 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226132|ref|NP_632054.1| - 1e-07 31.5 4.2 0.014 15.1 0.0 5.8 3 1 3 6 6 6 1 TPR repeat TPR_14 PF13428.6 gi|21226132|ref|NP_632054.1| - 6.7e-07 29.6 0.0 0.065 14.1 0.0 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21226132|ref|NP_632054.1| - 7.3e-07 29.7 0.0 0.14 12.9 0.0 3.4 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21226132|ref|NP_632054.1| - 4.6e-06 26.6 4.8 0.66 10.5 0.5 5.9 6 0 0 6 6 5 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21226132|ref|NP_632054.1| - 5.1e-06 26.3 18.8 0.03 14.5 0.3 5.2 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21226132|ref|NP_632054.1| - 0.00018 21.7 7.4 0.34 11.2 0.0 5.0 4 1 1 6 6 6 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21226132|ref|NP_632054.1| - 0.00021 21.7 0.1 0.33 11.5 0.0 3.6 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21226132|ref|NP_632054.1| - 0.0021 17.8 2.3 0.044 13.6 0.2 6.4 7 1 0 7 7 7 2 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|21226132|ref|NP_632054.1| - 0.0023 17.4 0.1 0.0066 15.9 0.0 1.8 2 0 0 2 2 2 1 Coatomer epsilon subunit Sel1 PF08238.12 gi|21226132|ref|NP_632054.1| - 0.013 16.1 2.9 0.14 12.9 0.2 3.1 3 0 0 3 3 3 0 Sel1 repeat TPR_7 PF13176.6 gi|21226132|ref|NP_632054.1| - 0.035 14.1 0.0 1.1 9.5 0.0 3.2 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21226132|ref|NP_632054.1| - 0.052 14.2 8.8 0.2 12.3 0.0 4.8 6 0 0 6 6 6 0 Tetratricopeptide repeat HicB_lk_antitox PF15919.5 gi|21226133|ref|NP_632055.1| - 1.2e-12 48.1 0.1 1.3e-12 47.9 0.1 1.1 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF1902 PF08972.11 gi|21226133|ref|NP_632055.1| - 0.0073 16.3 0.0 0.0094 15.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) FANCI_S1-cap PF14674.6 gi|21226133|ref|NP_632055.1| - 0.013 15.6 0.0 0.018 15.1 0.0 1.4 1 0 0 1 1 1 0 FANCI solenoid 1 cap HicA_toxin PF07927.12 gi|21226134|ref|NP_632056.1| - 4e-16 58.8 0.3 5.1e-16 58.5 0.3 1.2 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, LuxE PF04443.12 gi|21226135|ref|NP_632057.1| - 0.091 11.8 0.4 0.14 11.1 0.4 1.5 1 1 0 1 1 1 0 Acyl-protein synthetase, LuxE vATP-synt_AC39 PF01992.16 gi|21226136|ref|NP_632058.1| - 0.00012 21.8 2.4 0.00021 20.9 2.3 1.4 1 1 0 1 1 1 1 ATP synthase (C/AC39) subunit SirB PF04247.12 gi|21226136|ref|NP_632058.1| - 0.58 10.3 6.3 0.84 9.7 0.9 2.3 2 0 0 2 2 2 0 Invasion gene expression up-regulator, SirB Sdh_cyt PF01127.22 gi|21226136|ref|NP_632058.1| - 2.4 8.2 5.8 0.49 10.4 0.9 2.0 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HEAT_2 PF13646.6 gi|21226137|ref|NP_632059.1| - 4.9e-23 81.3 0.0 0.0003 21.1 0.0 6.0 3 2 1 5 5 5 5 HEAT repeats Cnd1 PF12717.7 gi|21226137|ref|NP_632059.1| - 2e-10 40.9 25.2 0.00091 19.3 0.6 7.3 4 2 5 9 9 9 5 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 gi|21226137|ref|NP_632059.1| - 4.9e-09 35.7 0.8 0.9 10.0 0.0 7.7 8 0 0 8 8 8 2 HEAT repeat CLASP_N PF12348.8 gi|21226137|ref|NP_632059.1| - 0.0017 18.0 3.4 0.11 12.0 0.0 4.2 6 0 0 6 6 6 1 CLASP N terminal LepB_N PF18640.1 gi|21226137|ref|NP_632059.1| - 0.012 15.3 1.3 0.12 11.9 0.0 2.6 1 1 0 2 2 2 0 LepB N-terminal domain HEAT_EZ PF13513.6 gi|21226137|ref|NP_632059.1| - 0.016 15.7 2.1 40 4.8 0.1 5.0 5 1 0 5 5 5 0 HEAT-like repeat DUF749 PF05370.11 gi|21226137|ref|NP_632059.1| - 0.26 11.4 3.7 0.91 9.6 0.7 3.1 2 0 0 2 2 2 0 Domain of unknown function (DUF749) HEPN_Apea PF18739.1 gi|21226138|ref|NP_632060.1| - 4.5e-13 49.5 1.7 4.5e-13 49.5 1.7 2.8 1 1 0 2 2 2 1 Apea-like HEPN Tox-URI2 PF15653.6 gi|21226138|ref|NP_632060.1| - 2.5 8.4 4.6 15 5.9 0.1 3.0 3 0 0 3 3 3 0 URI fold toxin 2 Arginosuc_synth PF00764.19 gi|161485685|ref|NP_632061.2| - 1.5e-181 603.9 0.1 1.8e-181 603.6 0.1 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|161485685|ref|NP_632061.2| - 0.00015 21.4 0.0 0.0018 17.8 0.0 2.2 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|161485685|ref|NP_632061.2| - 0.0093 15.1 0.0 0.014 14.5 0.0 1.3 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|161485685|ref|NP_632061.2| - 0.037 12.8 0.0 0.06 12.1 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase CPSase_L_D2 PF02786.17 gi|21226140|ref|NP_632062.1| - 8.2e-106 352.2 0.7 1.8e-70 236.7 0.2 2.4 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|21226140|ref|NP_632062.1| - 2.8e-43 147.1 0.1 1e-42 145.3 0.1 2.1 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 gi|21226140|ref|NP_632062.1| - 2.6e-22 78.8 0.4 6.7e-20 71.1 0.0 3.8 4 0 0 4 4 3 1 MGS-like domain ATP-grasp PF02222.22 gi|21226140|ref|NP_632062.1| - 7.4e-16 58.2 0.1 1.5e-07 31.1 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|21226140|ref|NP_632062.1| - 9.8e-16 57.9 0.1 3.6e-07 29.9 0.0 2.5 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|21226140|ref|NP_632062.1| - 3.4e-14 52.7 0.0 5.3e-06 26.2 0.0 2.7 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|21226140|ref|NP_632062.1| - 3.7e-09 36.8 0.3 0.0024 17.9 0.1 2.6 2 0 0 2 2 2 2 ATP-grasp domain GARS_A PF01071.19 gi|21226140|ref|NP_632062.1| - 6.3e-06 26.1 0.0 0.084 12.6 0.0 2.4 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.6 gi|21226140|ref|NP_632062.1| - 0.00017 21.2 0.0 0.0085 15.6 0.0 3.0 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|21226140|ref|NP_632062.1| - 0.018 14.6 0.0 3.6 7.1 0.0 3.2 4 0 0 4 4 4 0 ATP-grasp domain HTH_23 PF13384.6 gi|21226140|ref|NP_632062.1| - 0.036 13.9 0.0 3 7.8 0.0 3.1 3 0 0 3 3 3 0 Homeodomain-like domain DUF433 PF04255.14 gi|21226140|ref|NP_632062.1| - 0.051 13.4 0.0 5.4 7.0 0.0 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF433) B12-binding PF02310.19 gi|21226140|ref|NP_632062.1| - 0.055 13.5 0.0 2 8.5 0.0 3.0 2 0 0 2 2 2 0 B12 binding domain Rrf2 PF02082.20 gi|21226140|ref|NP_632062.1| - 0.057 13.8 0.1 16 6.0 0.0 3.3 3 0 0 3 3 3 0 Transcriptional regulator Hydrolase_6 PF13344.6 gi|21226140|ref|NP_632062.1| - 0.082 13.0 0.4 6.1 7.0 0.0 4.3 5 0 0 5 5 4 0 Haloacid dehalogenase-like hydrolase MerR_1 PF13411.6 gi|21226140|ref|NP_632062.1| - 0.11 12.7 0.0 3.4 7.8 0.0 3.2 2 0 0 2 2 2 0 MerR HTH family regulatory protein Epimerase PF01370.21 gi|21226140|ref|NP_632062.1| - 0.11 11.9 0.0 0.44 10.0 0.0 2.1 3 0 0 3 3 3 0 NAD dependent epimerase/dehydratase family CPSase_sm_chain PF00988.22 gi|21226141|ref|NP_632063.1| - 9.5e-49 164.5 0.0 1.5e-48 163.9 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|21226141|ref|NP_632063.1| - 2.3e-41 141.6 0.0 3.4e-41 141.1 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|21226141|ref|NP_632063.1| - 6.6e-07 29.3 0.1 0.042 13.6 0.1 2.4 1 1 0 2 2 2 2 Peptidase C26 STb_secrete PF09075.10 gi|21226141|ref|NP_632063.1| - 2.6 8.2 5.3 7.2 6.8 0.8 3.0 3 0 0 3 3 3 0 Heat-stable enterotoxin B, secretory ABC_tran PF00005.27 gi|21226142|ref|NP_632064.1| - 6.5e-36 123.9 0.0 1.5e-35 122.7 0.0 1.6 1 0 0 1 1 1 1 ABC transporter CBS PF00571.28 gi|21226142|ref|NP_632064.1| - 1.5e-13 50.9 0.5 3.1e-05 24.3 0.0 2.7 2 0 0 2 2 2 2 CBS domain AAA_21 PF13304.6 gi|21226142|ref|NP_632064.1| - 8.3e-06 25.8 0.0 0.059 13.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 gi|21226142|ref|NP_632064.1| - 1.7e-05 23.8 0.2 0.099 11.4 0.0 3.2 3 0 0 3 3 3 2 Predicted ATPase of the ABC class AAA_16 PF13191.6 gi|21226142|ref|NP_632064.1| - 0.0005 20.5 0.0 0.0015 19.0 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|21226142|ref|NP_632064.1| - 0.00058 19.5 0.0 0.0012 18.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|21226142|ref|NP_632064.1| - 0.0011 18.9 0.1 0.0022 17.9 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|21226142|ref|NP_632064.1| - 0.0034 17.9 0.2 0.0034 17.9 0.2 2.0 3 1 0 3 3 2 1 AAA domain AAA_15 PF13175.6 gi|21226142|ref|NP_632064.1| - 0.0051 16.6 0.8 0.008 15.9 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|21226142|ref|NP_632064.1| - 0.0068 16.7 1.4 0.057 13.7 0.6 2.7 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|21226142|ref|NP_632064.1| - 0.016 14.6 0.5 0.068 12.6 0.5 1.9 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain DUF1758 PF05585.12 gi|21226142|ref|NP_632064.1| - 0.031 14.0 0.0 0.081 12.7 0.0 1.6 1 0 0 1 1 1 0 Putative peptidase (DUF1758) SbcCD_C PF13558.6 gi|21226142|ref|NP_632064.1| - 0.073 13.3 0.7 0.43 10.8 0.7 2.3 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit G-alpha PF00503.20 gi|21226142|ref|NP_632064.1| - 0.1 11.8 0.0 0.13 11.4 0.0 1.4 1 0 0 1 1 1 0 G-protein alpha subunit AAA_30 PF13604.6 gi|21226142|ref|NP_632064.1| - 0.1 12.3 0.0 0.22 11.2 0.0 1.7 1 1 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 gi|21226143|ref|NP_632065.1| - 8.1e-28 97.4 9.3 8.1e-28 97.4 9.3 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OpuAC PF04069.12 gi|21226144|ref|NP_632066.1| - 1e-69 235.0 1.5 1.2e-69 234.8 1.5 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system NosD PF05048.13 gi|21226145|ref|NP_632067.1| - 5.6e-41 140.4 61.2 1.6e-37 129.1 13.2 4.7 4 1 1 5 5 5 2 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|21226145|ref|NP_632067.1| - 1.3e-19 69.8 8.3 2.2e-09 37.0 2.6 3.1 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.6 gi|21226145|ref|NP_632067.1| - 4.8e-16 59.0 53.6 2.8e-11 43.5 28.8 5.0 3 2 2 5 5 5 2 Right handed beta helix region Lactonase PF10282.9 gi|21226145|ref|NP_632067.1| - 5.9e-12 45.5 4.5 0.00032 20.1 0.1 3.3 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|21226145|ref|NP_632067.1| - 8.6e-12 45.2 6.0 5.4e-05 22.9 1.9 3.7 1 1 3 4 4 4 4 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|21226145|ref|NP_632067.1| - 2.7e-11 42.9 6.4 0.35 11.0 0.0 6.4 5 0 0 5 5 5 4 NHL repeat Cytochrom_D1 PF02239.16 gi|21226145|ref|NP_632067.1| - 1.5e-08 33.6 6.0 2.8e-05 22.8 0.3 3.2 2 1 1 3 3 3 2 Cytochrome D1 heme domain Arylesterase PF01731.20 gi|21226145|ref|NP_632067.1| - 0.0002 21.5 8.2 0.22 11.8 0.2 5.8 3 2 3 6 6 6 1 Arylesterase PD40 PF07676.12 gi|21226145|ref|NP_632067.1| - 0.0037 17.1 0.0 30 4.7 0.0 5.1 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat PKD_3 PF16820.5 gi|21226145|ref|NP_632067.1| - 0.034 13.9 0.5 3.9 7.3 0.1 2.6 2 0 0 2 2 2 0 PKD-like domain SBP56 PF05694.11 gi|21226145|ref|NP_632067.1| - 0.042 12.7 0.1 11 4.7 0.0 3.4 1 1 2 4 4 4 0 56kDa selenium binding protein (SBP56) DUF1513 PF07433.11 gi|21226145|ref|NP_632067.1| - 0.2 10.7 1.7 6.7 5.7 0.1 2.8 2 1 0 3 3 3 0 Protein of unknown function (DUF1513) HIRA_B PF09453.10 gi|21226145|ref|NP_632067.1| - 0.42 10.5 2.1 21 5.1 0.0 3.6 4 0 0 4 4 4 0 HIRA B motif PCC_BT PF18140.1 gi|21226145|ref|NP_632067.1| - 1.3 9.4 12.3 1.4 9.3 1.4 3.4 2 1 2 4 4 4 0 Propionyl-coenzyme A carboxylase BT domain TPR_1 PF00515.28 gi|21226146|ref|NP_632068.1| - 1.2e-42 142.0 2.4 9.9e-09 34.7 0.0 7.2 5 1 2 7 7 7 7 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21226146|ref|NP_632068.1| - 3e-36 120.6 3.9 1.7e-07 30.8 0.0 7.2 6 1 1 7 7 7 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21226146|ref|NP_632068.1| - 1.8e-30 102.6 3.4 3e-05 23.9 0.0 7.2 6 1 1 7 7 7 5 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226146|ref|NP_632068.1| - 9.9e-27 92.4 0.9 2.2e-07 30.4 0.0 7.8 5 2 2 7 7 7 6 TPR repeat TPR_14 PF13428.6 gi|21226146|ref|NP_632068.1| - 5.1e-21 73.6 1.5 0.003 18.2 0.0 6.6 2 2 5 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21226146|ref|NP_632068.1| - 1.8e-20 73.2 1.4 2e-06 28.2 0.0 5.3 4 1 0 5 5 5 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21226146|ref|NP_632068.1| - 1.9e-20 72.7 0.1 5.5e-10 39.3 0.0 4.5 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21226146|ref|NP_632068.1| - 5.3e-20 71.8 0.0 3e-05 24.6 0.0 4.6 3 2 1 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21226146|ref|NP_632068.1| - 4.1e-19 68.6 1.5 5.9e-07 29.7 0.0 6.0 2 1 4 6 6 6 5 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21226146|ref|NP_632068.1| - 4.6e-16 58.0 0.0 0.017 15.5 0.0 6.7 7 1 0 7 7 7 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21226146|ref|NP_632068.1| - 2.4e-14 52.2 0.0 0.14 12.3 0.0 6.6 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21226146|ref|NP_632068.1| - 1e-12 47.8 1.2 0.32 11.7 0.0 6.2 6 0 0 6 6 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21226146|ref|NP_632068.1| - 1.2e-11 44.7 0.7 0.02 15.1 0.0 4.2 3 1 1 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 gi|21226146|ref|NP_632068.1| - 1.2e-09 37.7 0.5 0.055 13.4 0.0 6.2 5 1 1 6 6 6 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|21226146|ref|NP_632068.1| - 3e-09 36.8 0.3 0.057 13.5 0.0 5.0 6 0 0 6 6 5 1 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.8 gi|21226146|ref|NP_632068.1| - 6.1e-07 28.7 0.0 0.057 12.3 0.0 3.8 3 1 1 4 4 4 2 NMDA receptor-regulated protein 1 TPR_15 PF13429.6 gi|21226146|ref|NP_632068.1| - 1.3e-06 27.8 0.1 0.088 12.0 0.0 4.6 2 2 2 5 5 5 2 Tetratricopeptide repeat RPN7 PF10602.9 gi|21226146|ref|NP_632068.1| - 9.3e-05 22.2 0.3 0.89 9.2 0.1 4.0 2 2 2 4 4 4 1 26S proteasome subunit RPN7 TPR_21 PF09976.9 gi|21226146|ref|NP_632068.1| - 0.00072 19.3 0.0 52 3.5 0.0 4.8 3 2 2 5 5 5 0 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 gi|21226146|ref|NP_632068.1| - 0.0026 18.2 0.0 5.4 7.9 0.0 4.7 5 0 0 5 5 5 1 Tetratricopeptide repeat DUF3856 PF12968.7 gi|21226146|ref|NP_632068.1| - 0.0027 17.8 1.2 8.5 6.4 0.5 4.6 3 1 1 4 4 4 0 Domain of Unknown Function (DUF3856) SRP_TPR_like PF17004.5 gi|21226146|ref|NP_632068.1| - 0.0052 16.8 0.0 0.37 10.8 0.0 2.6 2 1 0 2 2 2 1 Putative TPR-like repeat BTAD PF03704.17 gi|21226146|ref|NP_632068.1| - 0.017 15.6 1.0 0.3 11.5 0.2 2.8 2 1 1 3 3 3 0 Bacterial transcriptional activator domain MIT PF04212.18 gi|21226146|ref|NP_632068.1| - 0.039 14.0 6.5 32 4.7 0.1 5.5 5 1 1 6 6 6 0 MIT (microtubule interacting and transport) domain Coatomer_E PF04733.14 gi|21226146|ref|NP_632068.1| - 0.13 11.6 0.0 1.9 7.8 0.0 2.6 3 0 0 3 3 3 0 Coatomer epsilon subunit PPR PF01535.20 gi|21226146|ref|NP_632068.1| - 0.47 10.8 0.0 0.47 10.8 0.0 5.8 7 1 1 8 8 5 0 PPR repeat Ank_2 PF12796.7 gi|21226147|ref|NP_632069.1| - 6e-73 241.5 23.6 1.4e-13 51.2 0.1 5.1 1 1 6 7 7 7 7 Ankyrin repeats (3 copies) Ank_4 PF13637.6 gi|21226147|ref|NP_632069.1| - 3.1e-47 158.3 3.3 1.6e-07 31.7 0.2 8.3 1 1 7 8 8 8 8 Ankyrin repeats (many copies) Ank_5 PF13857.6 gi|21226147|ref|NP_632069.1| - 1.5e-43 146.2 8.0 6.4e-11 42.3 0.4 5.3 4 1 1 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 gi|21226147|ref|NP_632069.1| - 7e-43 143.3 11.1 1.4e-05 25.3 0.3 8.0 8 0 0 8 8 8 7 Ankyrin repeat Ank_3 PF13606.6 gi|21226147|ref|NP_632069.1| - 5.4e-33 109.3 6.4 0.00097 19.4 0.1 9.1 9 0 0 9 9 9 7 Ankyrin repeat DUF3107 PF11305.8 gi|21226147|ref|NP_632069.1| - 1.2e-05 25.4 8.3 2.4 8.5 0.1 6.3 3 2 4 7 7 7 2 Protein of unknown function (DUF3107) T6PP_N PF18572.1 gi|21226147|ref|NP_632069.1| - 0.048 13.5 1.1 20 5.1 0.3 3.5 2 1 2 4 4 4 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain Attacin_C PF03769.15 gi|21226147|ref|NP_632069.1| - 0.15 12.3 4.1 6.7 7.0 0.7 3.3 2 1 2 4 4 4 0 Attacin, C-terminal region Aminotran_3 PF00202.21 gi|21226149|ref|NP_632071.1| - 1.6e-118 395.9 0.0 1.8e-118 395.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aldedh PF00171.22 gi|21226150|ref|NP_632072.1| - 1.7e-181 603.8 0.0 1.9e-181 603.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|21226150|ref|NP_632072.1| - 0.012 14.6 0.0 0.041 12.9 0.0 1.7 2 0 0 2 2 2 0 Acyl-CoA reductase (LuxC) DUF1487 PF07368.11 gi|21226150|ref|NP_632072.1| - 0.066 12.6 0.0 2.4 7.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) Response_reg PF00072.24 gi|21226151|ref|NP_632073.1| - 7.4e-23 80.9 0.1 9.2e-23 80.5 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain ThiG PF05690.14 gi|21226151|ref|NP_632073.1| - 0.043 13.1 0.0 0.06 12.6 0.0 1.2 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG DUF2795 PF11387.8 gi|21226151|ref|NP_632073.1| - 0.086 13.1 0.0 2 8.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2795) GatB_N PF02934.15 gi|21226152|ref|NP_632074.1| - 7e-68 229.0 0.1 9.1e-68 228.6 0.1 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|21226152|ref|NP_632074.1| - 3e-18 66.1 0.1 6.4e-18 65.0 0.1 1.6 1 0 0 1 1 1 1 GatB domain GAD PF02938.14 gi|21226152|ref|NP_632074.1| - 1.7e-15 57.0 0.5 1e-14 54.5 0.1 2.3 2 0 0 2 2 2 1 GAD domain YqeY PF09424.10 gi|21226152|ref|NP_632074.1| - 1.9e-05 24.8 0.1 5.2e-05 23.3 0.1 1.8 1 1 0 1 1 1 1 Yqey-like protein DUF2999 PF11212.8 gi|21226152|ref|NP_632074.1| - 0.09 13.1 0.1 0.58 10.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2999) SnoaL_3 PF13474.6 gi|21226153|ref|NP_632075.1| - 2.5e-21 76.2 0.1 2.8e-21 76.0 0.1 1.0 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|21226153|ref|NP_632075.1| - 2.1e-08 34.5 0.1 2.5e-08 34.3 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 gi|21226153|ref|NP_632075.1| - 2e-07 31.6 0.0 2.5e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain CaMKII_AD PF08332.10 gi|21226153|ref|NP_632075.1| - 6.9e-06 26.2 0.0 9.8e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II association domain DUF3225 PF11533.8 gi|21226153|ref|NP_632075.1| - 0.00097 18.8 0.0 0.0012 18.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3225) Transposase_20 PF02371.16 gi|21226154|ref|NP_632076.1| - 1.4e-28 99.0 0.0 3.6e-28 97.7 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|21226154|ref|NP_632076.1| - 9.1e-20 71.1 0.2 2e-19 70.0 0.2 1.6 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.12 gi|21226154|ref|NP_632076.1| - 0.026 14.8 0.0 0.082 13.2 0.0 1.9 1 0 0 1 1 1 0 Orthopoxvirus F14 protein 5_3_exonuc PF01367.20 gi|21226154|ref|NP_632076.1| - 0.2 12.3 2.6 3.2 8.4 0.7 3.3 2 1 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Usp PF00582.26 gi|21226156|ref|NP_632078.1| - 2.9e-32 112.1 0.2 3.4e-32 111.9 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family PGM_PMM_I PF02878.16 gi|21226156|ref|NP_632078.1| - 0.0023 17.6 0.0 0.0037 17.0 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Fer4_7 PF12838.7 gi|21226157|ref|NP_632079.1| - 1.1e-28 99.5 67.4 8.8e-11 42.2 8.2 5.4 5 1 0 5 5 5 4 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21226157|ref|NP_632079.1| - 9.7e-27 91.7 93.0 3.2e-07 29.9 2.5 9.0 10 0 0 10 10 8 8 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21226157|ref|NP_632079.1| - 3.5e-20 71.9 71.1 3.9e-05 23.7 5.9 7.6 5 2 3 8 8 8 7 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21226157|ref|NP_632079.1| - 5.8e-20 71.2 69.5 1.3e-06 28.5 6.9 6.6 4 3 4 8 8 7 7 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21226157|ref|NP_632079.1| - 7.1e-17 62.1 70.0 0.0011 19.8 1.1 8.4 6 3 2 8 8 8 6 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|21226157|ref|NP_632079.1| - 1.5e-16 60.3 69.5 0.00036 20.6 7.7 7.0 6 1 1 7 7 6 6 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21226157|ref|NP_632079.1| - 3.7e-13 48.9 85.1 5.7e-05 23.0 2.3 9.0 9 1 0 9 9 8 8 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21226157|ref|NP_632079.1| - 2.4e-11 43.0 77.4 0.00026 20.9 1.6 9.2 9 0 0 9 9 9 6 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21226157|ref|NP_632079.1| - 8.3e-09 35.8 70.6 0.0006 20.2 10.2 6.8 3 2 5 8 8 8 7 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21226157|ref|NP_632079.1| - 0.0033 18.1 56.0 0.5 11.1 1.3 8.6 8 0 0 8 8 8 5 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|21226157|ref|NP_632079.1| - 0.052 14.1 80.3 0.1 13.2 11.9 8.5 3 2 6 9 9 8 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21226157|ref|NP_632079.1| - 0.24 12.0 82.7 0.056 14.0 3.9 9.1 9 0 0 9 9 9 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21226157|ref|NP_632079.1| - 0.28 12.1 0.2 0.28 12.1 0.2 8.2 8 1 1 10 10 9 0 4Fe-4S dicluster domain FlpD PF02662.16 gi|21226158|ref|NP_632080.1| - 1.1e-50 170.7 5.4 4.9e-50 168.6 0.1 3.5 4 0 0 4 4 3 1 Methyl-viologen-reducing hydrogenase, delta subunit Pyr_redox_2 PF07992.14 gi|21226158|ref|NP_632080.1| - 3.1e-16 59.5 0.8 1.9e-15 56.8 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_7 PF12838.7 gi|21226158|ref|NP_632080.1| - 1.4e-14 54.4 41.9 0.00016 22.2 7.8 5.4 4 1 2 6 6 5 5 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21226158|ref|NP_632080.1| - 9.2e-14 50.6 57.4 1.1e-06 28.1 3.4 6.2 6 1 0 6 6 5 3 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21226158|ref|NP_632080.1| - 5.4e-13 48.8 36.1 2.6e-05 24.3 0.2 5.3 4 1 1 5 5 5 4 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21226158|ref|NP_632080.1| - 1.1e-12 47.9 51.2 2.7e-08 33.8 12.0 6.0 7 0 0 7 7 6 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21226158|ref|NP_632080.1| - 2.2e-12 46.5 57.5 6.7e-06 25.9 3.5 6.2 7 0 0 7 7 5 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21226158|ref|NP_632080.1| - 4.7e-10 39.0 54.5 6.3e-06 26.0 2.2 6.2 7 0 0 7 7 6 4 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21226158|ref|NP_632080.1| - 4.7e-10 40.3 27.4 0.013 16.5 0.1 5.5 5 0 0 5 5 5 3 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|21226158|ref|NP_632080.1| - 1e-09 38.4 41.1 2.7e-07 30.7 10.8 5.2 4 1 2 6 6 6 4 4Fe-4S dicluster domain Pyr_redox_3 PF13738.6 gi|21226158|ref|NP_632080.1| - 9.5e-08 31.6 0.0 9.1e-07 28.4 0.0 2.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|21226158|ref|NP_632080.1| - 1e-07 31.9 2.1 1.9e-05 24.4 0.7 2.7 2 1 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|21226158|ref|NP_632080.1| - 1e-06 29.2 0.3 2e-05 25.1 0.3 2.6 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|21226158|ref|NP_632080.1| - 2.3e-06 27.3 0.2 3.8e-06 26.5 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|21226158|ref|NP_632080.1| - 2.5e-06 26.8 0.9 5.2e-06 25.8 0.9 1.5 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|21226158|ref|NP_632080.1| - 4e-06 26.2 0.4 1.2e-05 24.6 0.3 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A Fer4_8 PF13183.6 gi|21226158|ref|NP_632080.1| - 6.1e-06 26.6 28.4 0.022 15.2 0.0 5.4 5 1 0 5 5 4 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226158|ref|NP_632080.1| - 1.8e-05 25.1 31.3 0.0059 17.1 4.5 4.4 4 0 0 4 4 3 3 4Fe-4S dicluster domain NAD_binding_8 PF13450.6 gi|21226158|ref|NP_632080.1| - 2.1e-05 24.7 0.0 4.9e-05 23.5 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|21226158|ref|NP_632080.1| - 0.00018 20.9 0.5 0.00028 20.2 0.5 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|21226158|ref|NP_632080.1| - 0.00027 19.8 1.5 0.00061 18.6 1.1 1.7 1 1 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|21226158|ref|NP_632080.1| - 0.0005 19.4 0.0 0.0011 18.3 0.0 1.5 1 0 0 1 1 1 1 Thi4 family Fer4_4 PF12800.7 gi|21226158|ref|NP_632080.1| - 0.00066 20.0 34.7 0.036 14.6 4.0 5.4 4 0 0 4 4 4 2 4Fe-4S binding domain Amino_oxidase PF01593.24 gi|21226158|ref|NP_632080.1| - 0.0021 17.4 0.1 0.021 14.1 0.0 2.1 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase AlaDh_PNT_C PF01262.21 gi|21226158|ref|NP_632080.1| - 0.0034 16.7 0.2 0.0084 15.4 0.1 1.6 2 0 0 2 2 1 1 Alanine dehydrogenase/PNT, C-terminal domain K_oxygenase PF13434.6 gi|21226158|ref|NP_632080.1| - 0.0063 15.7 0.2 2.6 7.1 0.0 2.6 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|21226158|ref|NP_632080.1| - 0.014 15.3 0.1 1.7 8.6 0.0 2.6 2 0 0 2 2 2 0 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 gi|21226158|ref|NP_632080.1| - 0.022 15.2 0.3 0.17 12.3 0.1 2.6 2 1 0 2 2 2 0 Putative NAD(P)-binding Fer4_13 PF13370.6 gi|21226158|ref|NP_632080.1| - 0.087 13.4 32.8 0.58 10.7 4.3 4.7 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I 3HCDH_N PF02737.18 gi|21226158|ref|NP_632080.1| - 0.094 12.6 0.6 0.21 11.5 0.6 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Trp_halogenase PF04820.14 gi|21226158|ref|NP_632080.1| - 0.15 10.9 1.7 0.34 9.7 0.7 1.8 2 0 0 2 2 2 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|21226158|ref|NP_632080.1| - 0.18 10.9 0.9 1.1 8.2 0.4 2.3 3 0 0 3 3 3 0 Lycopene cyclase protein Fer4_15 PF13459.6 gi|21226158|ref|NP_632080.1| - 0.31 11.8 29.3 0.15 12.8 0.7 4.8 3 1 0 3 3 3 0 4Fe-4S single cluster domain FeThRed_B PF02943.15 gi|21226159|ref|NP_632081.1| - 1.3e-26 92.6 1.4 1.5e-26 92.4 1.4 1.0 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain FeS PF04060.13 gi|21226160|ref|NP_632082.1| - 1.4e-13 50.2 3.0 1.4e-13 50.2 3.0 2.3 2 0 0 2 2 2 1 Putative Fe-S cluster Fer4 PF00037.27 gi|21226160|ref|NP_632082.1| - 2.1e-06 27.3 22.2 9e-06 25.3 3.8 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21226160|ref|NP_632082.1| - 6e-05 23.1 14.6 0.00068 19.7 9.5 3.1 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21226160|ref|NP_632082.1| - 0.00018 22.0 17.5 0.0055 17.3 3.2 3.0 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21226160|ref|NP_632082.1| - 0.00024 21.2 12.3 0.0029 17.7 0.6 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21226160|ref|NP_632082.1| - 0.00063 20.4 3.0 0.0077 17.0 0.1 2.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|21226160|ref|NP_632082.1| - 0.0013 19.1 1.2 0.0013 19.1 1.2 3.7 3 1 0 3 3 3 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21226160|ref|NP_632082.1| - 0.0016 18.5 2.6 0.0016 18.5 2.6 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21226160|ref|NP_632082.1| - 0.002 18.1 3.5 0.002 18.1 3.5 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21226160|ref|NP_632082.1| - 0.0028 17.8 17.9 0.0059 16.8 9.0 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain YhfH PF14149.6 gi|21226160|ref|NP_632082.1| - 0.0074 16.2 2.5 0.0074 16.2 2.5 2.2 2 0 0 2 2 1 1 YhfH-like protein Fer4_8 PF13183.6 gi|21226160|ref|NP_632082.1| - 0.021 15.3 13.8 0.039 14.4 6.9 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226160|ref|NP_632082.1| - 0.027 15.0 6.7 0.027 15.0 6.7 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21226160|ref|NP_632082.1| - 0.13 13.3 7.4 0.13 13.3 7.4 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21226160|ref|NP_632082.1| - 0.27 12.2 19.9 0.26 12.3 2.3 3.2 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|21226160|ref|NP_632082.1| - 1.3 9.6 14.8 2.6 8.6 8.3 3.2 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I TPP_enzyme_M PF00205.22 gi|21226161|ref|NP_632083.1| - 1.8e-05 24.5 2.6 0.0043 16.8 0.1 3.3 3 1 0 3 3 3 2 Thiamine pyrophosphate enzyme, central domain Cas_GSU0053 PF09617.10 gi|21226161|ref|NP_632083.1| - 0.0075 16.2 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 CRISPR-associated protein GSU0053 (Cas_GSU0053) CO_dh PF02552.16 gi|21226161|ref|NP_632083.1| - 0.069 12.9 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Molydop_binding PF01568.21 gi|21226162|ref|NP_632084.1| - 5.9e-14 52.0 0.0 9.2e-14 51.4 0.0 1.3 1 1 0 1 1 1 1 Molydopterin dinucleotide binding domain CDC48_N PF02359.18 gi|21226162|ref|NP_632084.1| - 0.03 14.5 0.0 0.051 13.7 0.0 1.4 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Methyltransf_11 PF08241.12 gi|21226164|ref|NP_632086.1| - 1.2e-16 61.2 0.0 2.1e-16 60.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21226164|ref|NP_632086.1| - 4.1e-12 46.6 0.0 7.8e-12 45.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21226164|ref|NP_632086.1| - 3.6e-11 43.2 0.0 5e-11 42.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21226164|ref|NP_632086.1| - 1.1e-08 35.7 0.0 3.1e-08 34.3 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21226164|ref|NP_632086.1| - 1.4e-08 34.7 0.0 1.2e-07 31.6 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21226164|ref|NP_632086.1| - 3.4e-08 33.1 0.0 7.6e-08 32.0 0.0 1.6 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_9 PF08003.11 gi|21226164|ref|NP_632086.1| - 0.0001 21.4 0.0 0.00013 21.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Rotamase_2 PF13145.6 gi|21226164|ref|NP_632086.1| - 0.025 15.4 0.0 0.052 14.4 0.0 1.5 1 0 0 1 1 1 0 PPIC-type PPIASE domain MetW PF07021.12 gi|21226164|ref|NP_632086.1| - 0.031 13.9 0.0 0.043 13.4 0.0 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW DREV PF05219.12 gi|21226164|ref|NP_632086.1| - 0.097 11.7 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 DREV methyltransferase Methyltransf_8 PF05148.15 gi|21226164|ref|NP_632086.1| - 0.19 11.5 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase NosD PF05048.13 gi|21226165|ref|NP_632087.1| - 1e-67 227.9 50.3 1e-48 165.8 26.0 2.3 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21226165|ref|NP_632087.1| - 5.5e-38 130.3 79.7 1.4e-21 77.0 27.8 2.6 1 1 2 3 3 3 3 Right handed beta helix region PKD PF00801.20 gi|21226165|ref|NP_632087.1| - 5.7e-07 29.3 0.4 5.7e-07 29.3 0.4 2.0 2 0 0 2 2 2 1 PKD domain PGF-CTERM PF18204.1 gi|21226165|ref|NP_632087.1| - 0.075 13.0 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 PGF-CTERM motif NosD PF05048.13 gi|21226166|ref|NP_632088.1| - 9.3e-107 355.8 149.3 3e-53 180.6 39.8 4.7 1 1 4 5 5 5 5 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21226166|ref|NP_632088.1| - 5.1e-63 211.6 133.0 1.2e-21 77.2 25.9 4.8 1 1 3 5 5 5 4 Right handed beta helix region Pectate_lyase_3 PF12708.7 gi|21226166|ref|NP_632088.1| - 0.94 9.3 59.9 0.31 10.9 3.7 5.7 2 1 3 5 5 5 0 Pectate lyase superfamily protein NosD PF05048.13 gi|21226168|ref|NP_632090.1| - 1.1e-83 280.2 187.0 4.9e-41 140.6 48.4 6.0 2 1 4 6 6 6 5 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21226168|ref|NP_632090.1| - 2.5e-47 160.7 168.2 1.9e-18 66.8 43.1 5.7 2 2 5 7 7 7 4 Right handed beta helix region PKD PF00801.20 gi|21226168|ref|NP_632090.1| - 6.1e-18 64.4 11.1 5.6e-12 45.3 2.2 2.8 2 0 0 2 2 2 2 PKD domain PKD_3 PF16820.5 gi|21226168|ref|NP_632090.1| - 0.00061 19.5 2.3 0.057 13.2 0.1 3.0 2 0 0 2 2 2 2 PKD-like domain PGF-CTERM PF18204.1 gi|21226168|ref|NP_632090.1| - 0.013 15.5 0.0 0.023 14.7 0.0 1.4 1 0 0 1 1 1 0 PGF-CTERM motif Hist_deacetyl PF00850.19 gi|21226169|ref|NP_632091.1| - 1.7e-63 214.9 0.0 2.7e-63 214.3 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain zf-TFIIB PF13453.6 gi|21226169|ref|NP_632091.1| - 0.32 10.4 1.2 4.9 6.6 0.1 2.4 2 0 0 2 2 2 0 Transcription factor zinc-finger Hydantoinase_A PF01968.18 gi|21226170|ref|NP_632092.1| - 5.1e-50 170.4 5.5 3.8e-45 154.4 2.5 2.3 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|21226170|ref|NP_632092.1| - 3.1e-34 118.2 1.4 4.1e-30 104.8 0.2 3.5 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|21226170|ref|NP_632092.1| - 1.1e-05 24.2 0.2 0.026 13.1 0.0 2.3 2 0 0 2 2 2 2 MutL protein FtsA PF14450.6 gi|21226170|ref|NP_632092.1| - 3.3e-05 24.2 1.6 0.18 12.2 0.0 3.0 2 0 0 2 2 2 2 Cell division protein FtsA BcrAD_BadFG PF01869.20 gi|21226170|ref|NP_632092.1| - 0.00031 20.3 4.3 0.045 13.2 4.3 3.3 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family MreB_Mbl PF06723.13 gi|21226170|ref|NP_632092.1| - 0.00063 18.7 1.9 0.006 15.4 0.3 2.7 2 0 0 2 2 2 1 MreB/Mbl protein EutA PF06277.11 gi|21226170|ref|NP_632092.1| - 0.0065 15.4 2.4 1.8 7.3 0.0 2.8 3 0 0 3 3 3 2 Ethanolamine utilisation protein EutA DDR PF08841.10 gi|21226170|ref|NP_632092.1| - 0.0068 15.4 1.3 0.053 12.5 0.3 2.3 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain Ppx-GppA PF02541.16 gi|21226170|ref|NP_632092.1| - 0.0094 15.4 1.9 0.084 12.3 0.1 2.6 3 0 0 3 3 3 1 Ppx/GppA phosphatase family StbA PF06406.11 gi|21226170|ref|NP_632092.1| - 0.015 14.6 1.3 0.55 9.4 0.0 3.1 3 0 0 3 3 3 0 StbA protein SBF PF01758.16 gi|21226171|ref|NP_632093.1| - 5.7e-42 143.6 17.5 8.9e-42 143.0 17.5 1.3 1 0 0 1 1 1 1 Sodium Bile acid symporter family SBF_like PF13593.6 gi|21226171|ref|NP_632093.1| - 1.7e-18 67.0 19.7 2e-18 66.8 19.7 1.1 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) Mem_trans PF03547.18 gi|21226171|ref|NP_632093.1| - 1 7.7 18.7 0.051 12.0 8.1 2.9 1 1 2 3 3 3 0 Membrane transport protein S4 PF01479.25 gi|21226172|ref|NP_632094.1| - 1.5e-12 47.0 0.1 4.1e-12 45.6 0.1 1.8 1 0 0 1 1 1 1 S4 domain FtsJ PF01728.19 gi|21226172|ref|NP_632094.1| - 4.2e-08 33.5 0.0 7.3e-08 32.7 0.0 1.6 1 1 0 1 1 1 1 FtsJ-like methyltransferase Fibrillarin PF01269.17 gi|21226172|ref|NP_632094.1| - 3.5e-07 29.6 0.0 4.7e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.6 gi|21226172|ref|NP_632094.1| - 1.1e-06 29.3 0.0 1.9e-06 28.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21226172|ref|NP_632094.1| - 1.2e-06 28.4 0.0 2.4e-06 27.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21226172|ref|NP_632094.1| - 4.3e-05 24.1 0.0 0.00011 22.8 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain S4_2 PF13275.6 gi|21226172|ref|NP_632094.1| - 0.00019 21.2 0.0 0.00041 20.1 0.0 1.5 1 0 0 1 1 1 1 S4 domain Methyltransf_23 PF13489.6 gi|21226172|ref|NP_632094.1| - 0.0023 17.8 0.0 0.0034 17.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|21226172|ref|NP_632094.1| - 0.0026 18.7 0.0 0.0046 18.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain DUF2119 PF09892.9 gi|21226173|ref|NP_632095.1| - 6.5e-69 231.1 0.0 7.6e-69 230.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) Cpn60_TCP1 PF00118.24 gi|21226174|ref|NP_632096.1| - 1.7e-157 525.0 16.5 1.9e-157 524.8 16.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GARS_A PF01071.19 gi|21226174|ref|NP_632096.1| - 0.023 14.5 1.0 0.12 12.1 0.4 2.2 1 1 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Alba PF01918.21 gi|21226174|ref|NP_632096.1| - 0.1 12.4 0.6 0.47 10.3 0.1 2.4 2 0 0 2 2 2 0 Alba Rib_5-P_isom_A PF06026.14 gi|21226175|ref|NP_632097.1| - 5.9e-62 208.3 0.1 8.5e-62 207.8 0.1 1.2 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|21226175|ref|NP_632097.1| - 2.4e-06 27.6 0.6 0.00081 19.4 0.0 2.2 1 1 1 2 2 2 2 DeoR C terminal sensor domain Dppa2_A PF14049.6 gi|21226175|ref|NP_632097.1| - 0.044 13.9 0.1 0.17 12.0 0.0 1.9 2 0 0 2 2 2 0 Dppa2/4 conserved region in higher vertebrates Sugar-bind PF04198.13 gi|21226175|ref|NP_632097.1| - 0.089 11.9 0.1 0.14 11.3 0.1 1.3 1 0 0 1 1 1 0 Putative sugar-binding domain DUF2478 PF10649.9 gi|21226175|ref|NP_632097.1| - 0.15 11.7 0.1 0.37 10.4 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2478) tRNA-synt_2 PF00152.20 gi|21226176|ref|NP_632098.1| - 8.5e-90 301.0 0.2 1e-89 300.7 0.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|21226176|ref|NP_632098.1| - 1.2e-14 54.1 0.2 2.2e-14 53.2 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|21226176|ref|NP_632098.1| - 0.00021 20.9 1.0 0.033 13.7 0.0 3.0 3 0 0 3 3 3 1 tRNA synthetases class II core domain (F) Med30 PF11315.8 gi|21226176|ref|NP_632098.1| - 0.069 13.3 0.0 0.15 12.2 0.0 1.6 1 0 0 1 1 1 0 Mediator complex subunit 30 Cupredoxin_1 PF13473.6 gi|21226177|ref|NP_632099.1| - 6e-10 39.2 0.1 7.7e-10 38.8 0.1 1.1 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 gi|21226177|ref|NP_632099.1| - 1.3e-09 38.4 0.8 9.7e-09 35.6 0.8 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Metallophos PF00149.28 gi|21226179|ref|NP_632101.1| - 1.3e-11 45.4 0.8 1.9e-11 44.8 0.8 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|21226179|ref|NP_632101.1| - 1.2e-10 41.9 0.1 2e-10 41.1 0.1 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|21226179|ref|NP_632101.1| - 0.00016 21.1 0.1 0.43 9.9 0.0 2.5 2 1 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily Flavodoxin_1 PF00258.25 gi|21226179|ref|NP_632101.1| - 0.15 12.3 0.0 0.25 11.5 0.0 1.5 1 1 0 1 1 1 0 Flavodoxin Pribosyltran PF00156.27 gi|21226180|ref|NP_632102.1| - 3.3e-10 39.7 0.0 4.9e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Amidohydro_3 PF07969.11 gi|21226181|ref|NP_632103.1| - 0.28 10.6 2.5 0.15 11.5 0.8 1.4 2 0 0 2 2 2 0 Amidohydrolase family DUF711 PF05167.12 gi|21226183|ref|NP_632105.1| - 3.1e-183 609.3 9.3 3.8e-183 609.0 9.3 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) ACT_6 PF13740.6 gi|21226184|ref|NP_632106.1| - 8.7e-17 60.9 0.2 9.9e-17 60.7 0.2 1.0 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|21226184|ref|NP_632106.1| - 3.5e-09 36.3 0.4 4.7e-09 35.9 0.4 1.2 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|21226184|ref|NP_632106.1| - 1.9e-05 25.2 1.0 3e-05 24.5 0.8 1.4 2 0 0 2 2 2 1 ACT domain ACT_7 PF13840.6 gi|21226184|ref|NP_632106.1| - 0.0091 15.8 0.8 0.013 15.2 0.8 1.3 1 0 0 1 1 1 1 ACT domain SKI PF01202.22 gi|21226186|ref|NP_632108.1| - 2.4e-30 105.7 0.0 2.9e-30 105.5 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase Cytidylate_kin2 PF13189.6 gi|21226186|ref|NP_632108.1| - 1.9e-06 28.2 0.2 6.2e-06 26.5 0.2 2.0 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|21226186|ref|NP_632108.1| - 2.8e-06 27.9 0.0 7.1e-06 26.6 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|21226186|ref|NP_632108.1| - 1.4e-05 25.3 0.0 2.1e-05 24.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|21226186|ref|NP_632108.1| - 3.5e-05 23.6 0.3 0.00012 21.9 0.0 1.8 1 1 1 2 2 2 1 Cytidylate kinase dNK PF01712.19 gi|21226186|ref|NP_632108.1| - 0.0013 18.6 0.0 0.24 11.2 0.0 2.1 2 0 0 2 2 2 1 Deoxynucleoside kinase AAA_17 PF13207.6 gi|21226186|ref|NP_632108.1| - 0.0096 16.3 0.1 0.033 14.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|21226186|ref|NP_632108.1| - 0.01 16.2 0.0 0.022 15.2 0.0 1.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ATP_bind_2 PF03668.15 gi|21226186|ref|NP_632108.1| - 0.015 14.6 0.3 0.045 13.0 0.3 1.6 1 1 0 1 1 1 0 P-loop ATPase protein family ABC_tran PF00005.27 gi|21226186|ref|NP_632108.1| - 0.018 15.6 0.0 0.029 14.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_2 PF07724.14 gi|21226186|ref|NP_632108.1| - 0.025 14.7 0.0 0.036 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) APS_kinase PF01583.20 gi|21226186|ref|NP_632108.1| - 0.034 14.0 0.0 0.065 13.1 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_16 PF13191.6 gi|21226186|ref|NP_632108.1| - 0.072 13.5 0.0 0.078 13.4 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|21226186|ref|NP_632108.1| - 0.074 12.2 0.1 0.11 11.7 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_22 PF13401.6 gi|21226186|ref|NP_632108.1| - 0.088 13.1 0.0 0.2 11.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain CoaE PF01121.20 gi|21226186|ref|NP_632108.1| - 0.13 12.0 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Dephospho-CoA kinase AAA_28 PF13521.6 gi|21226186|ref|NP_632108.1| - 0.17 12.2 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain Trm56 PF01994.16 gi|21226188|ref|NP_632110.1| - 4.8e-48 162.0 0.0 5.9e-48 161.7 0.0 1.1 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 Glycos_transf_3 PF00591.21 gi|21226189|ref|NP_632111.1| - 1.4e-15 57.6 0.2 9.3e-15 54.9 0.2 2.0 1 1 0 1 1 1 1 Glycosyl transferase family, a/b domain PYNP_C PF07831.13 gi|21226189|ref|NP_632111.1| - 4.4e-15 55.1 0.1 1.1e-14 53.8 0.1 1.7 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_trans_3N PF02885.17 gi|21226189|ref|NP_632111.1| - 3e-13 49.4 0.0 6.3e-13 48.4 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Molydop_binding PF01568.21 gi|21226189|ref|NP_632111.1| - 0.00079 19.4 0.0 0.0025 17.8 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Biotin_lipoyl PF00364.22 gi|21226189|ref|NP_632111.1| - 0.009 15.8 0.1 0.064 13.1 0.1 2.5 1 0 0 1 1 1 1 Biotin-requiring enzyme DUF2254 PF10011.9 gi|21226189|ref|NP_632111.1| - 0.01 14.7 0.0 0.015 14.1 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) CDC48_N PF02359.18 gi|21226189|ref|NP_632111.1| - 0.024 14.8 0.0 0.063 13.5 0.0 1.7 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Biotin_lipoyl_2 PF13533.6 gi|21226189|ref|NP_632111.1| - 0.035 13.9 0.3 0.12 12.3 0.1 2.0 2 0 0 2 2 2 0 Biotin-lipoyl like Muted PF14942.6 gi|21226189|ref|NP_632111.1| - 0.13 12.6 0.0 0.32 11.3 0.0 1.5 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein EamA PF00892.20 gi|21226190|ref|NP_632112.1| - 2.7e-45 153.9 39.4 2e-26 92.8 16.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|21226190|ref|NP_632112.1| - 1.1e-08 34.8 12.3 1.7e-07 30.9 12.4 2.0 1 1 0 1 1 1 1 Triose-phosphate Transporter family TMEM234 PF10639.9 gi|21226190|ref|NP_632112.1| - 0.064 13.3 8.0 0.91 9.6 0.5 2.6 2 1 0 2 2 2 0 Putative transmembrane family 234 Phage_holin_5_2 PF16079.5 gi|21226191|ref|NP_632113.1| - 0.00045 20.5 2.9 0.00054 20.2 2.9 1.1 1 0 0 1 1 1 1 Phage holin family Hol44, in holin superfamily V Peptidase_A22B PF04258.13 gi|21226191|ref|NP_632113.1| - 0.0025 17.4 1.2 0.0025 17.4 1.2 1.0 1 0 0 1 1 1 1 Signal peptide peptidase Phage_holin_3_6 PF07332.11 gi|21226191|ref|NP_632113.1| - 0.013 15.5 3.4 0.014 15.4 3.4 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Arteri_Gl PF00951.18 gi|21226191|ref|NP_632113.1| - 0.016 15.0 1.7 0.016 15.0 1.7 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF2975 PF11188.8 gi|21226191|ref|NP_632113.1| - 0.036 13.9 5.4 0.043 13.7 5.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF2512 PF10710.9 gi|21226191|ref|NP_632113.1| - 0.04 13.6 4.9 0.047 13.4 4.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2512) MgtE PF01769.16 gi|21226191|ref|NP_632113.1| - 0.041 14.3 3.4 0.041 14.3 3.4 1.0 1 0 0 1 1 1 0 Divalent cation transporter HlyIII PF03006.20 gi|21226191|ref|NP_632113.1| - 0.057 13.1 3.1 0.062 13.0 3.1 1.0 1 0 0 1 1 1 0 Haemolysin-III related DGF-1_5 PF11038.8 gi|21226191|ref|NP_632113.1| - 0.067 12.5 0.3 0.063 12.6 0.3 1.1 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 RseC_MucC PF04246.12 gi|21226191|ref|NP_632113.1| - 0.11 12.5 3.3 0.12 12.3 3.3 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Otopetrin PF03189.13 gi|21226191|ref|NP_632113.1| - 0.12 11.2 3.4 0.12 11.2 3.4 1.0 1 0 0 1 1 1 0 Otopetrin DUF2207 PF09972.9 gi|21226191|ref|NP_632113.1| - 0.37 9.5 3.3 0.4 9.4 3.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 gi|21226191|ref|NP_632113.1| - 1.6 9.1 12.0 30 4.9 12.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) TM_helix PF05552.12 gi|21226191|ref|NP_632113.1| - 8.9 6.4 11.9 0.38 10.8 2.7 2.2 2 0 0 2 2 2 0 Conserved TM helix MacB_PCD PF12704.7 gi|21226193|ref|NP_632115.1| - 6.9e-17 62.4 0.5 6.9e-17 62.4 0.5 1.8 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|21226193|ref|NP_632115.1| - 3.2e-10 40.4 5.9 3.2e-10 40.4 5.9 2.6 3 0 0 3 3 3 1 FtsX-like permease family TcfC PF16967.5 gi|21226194|ref|NP_632116.1| - 0.0025 17.2 0.0 2.6 7.6 0.0 3.7 3 1 1 4 4 4 1 E-set like domain BsuPI PF12690.7 gi|21226194|ref|NP_632116.1| - 0.038 14.0 0.1 4.7 7.3 0.0 2.6 2 0 0 2 2 2 0 Intracellular proteinase inhibitor Glyco_hydro_2 PF00703.21 gi|21226194|ref|NP_632116.1| - 0.042 14.5 0.6 1.2 9.8 0.1 2.7 2 1 0 2 2 2 0 Glycosyl hydrolases family 2 DUF3324 PF11797.8 gi|21226194|ref|NP_632116.1| - 0.067 13.2 0.0 2.4 8.1 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function C-terminal (DUF3324) GATase_3 PF07685.14 gi|21226195|ref|NP_632117.1| - 3e-51 173.8 0.0 5.4e-51 173.0 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|21226195|ref|NP_632117.1| - 3.8e-20 72.2 0.0 6.4e-20 71.5 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|21226195|ref|NP_632117.1| - 3.4e-19 69.4 0.1 3.3e-18 66.2 0.1 2.1 1 1 0 1 1 1 1 AAA domain GATase PF00117.28 gi|21226195|ref|NP_632117.1| - 2.4e-05 24.2 0.0 4.8e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|21226195|ref|NP_632117.1| - 0.0054 16.6 0.0 0.01 15.7 0.0 1.5 1 0 0 1 1 1 1 SNO glutamine amidotransferase family Erythro_esteras PF05139.14 gi|21226196|ref|NP_632118.1| - 0.00015 21.7 0.1 0.0023 17.8 0.0 2.0 2 0 0 2 2 2 2 Erythromycin esterase Big_7 PF17957.1 gi|21226197|ref|NP_632119.1| - 0.003 18.3 2.6 1.2 10.0 0.0 3.1 2 1 1 3 3 3 2 Bacterial Ig domain DUF4879 PF16219.5 gi|21226197|ref|NP_632119.1| - 0.04 14.2 0.3 0.071 13.3 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4879) DUF4528 PF15031.6 gi|21226197|ref|NP_632119.1| - 0.042 13.9 0.2 0.18 11.9 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4528) FlgD_ig PF13860.6 gi|21226197|ref|NP_632119.1| - 0.12 12.3 0.2 9.8 6.1 0.0 2.6 2 1 0 2 2 2 0 FlgD Ig-like domain Transposase_20 PF02371.16 gi|21226198|ref|NP_632120.1| - 1.5e-28 98.9 0.0 3.8e-28 97.6 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|21226198|ref|NP_632120.1| - 2.2e-18 66.6 0.2 4.9e-18 65.5 0.2 1.6 1 0 0 1 1 1 1 Transposase 5_3_exonuc PF01367.20 gi|21226198|ref|NP_632120.1| - 1.9 9.1 5.7 3.3 8.4 0.7 3.3 3 1 0 3 3 3 0 5'-3' exonuclease, C-terminal SAM fold OCD_Mu_crystall PF02423.15 gi|21226199|ref|NP_632121.1| - 6.1e-114 380.2 0.1 7.1e-114 380.0 0.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|21226199|ref|NP_632121.1| - 1e-07 32.1 0.0 2e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|21226199|ref|NP_632121.1| - 0.017 15.7 0.0 0.035 14.7 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent THF_DHG_CYH_C PF02882.19 gi|21226199|ref|NP_632121.1| - 0.054 12.8 0.1 0.1 11.9 0.1 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF5616 PF18481.1 gi|21226200|ref|NP_632122.1| - 2.1e-46 157.7 0.1 2.7e-46 157.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5616) DUF434 PF04256.12 gi|21226200|ref|NP_632122.1| - 9e-17 60.5 0.0 1.8e-16 59.5 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF434) DUF5100 PF17029.5 gi|21226200|ref|NP_632122.1| - 0.15 11.9 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5100) TPR_17 PF13431.6 gi|21226201|ref|NP_632123.1| - 8.6e-31 104.1 0.4 7.2e-05 22.9 0.0 6.1 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21226201|ref|NP_632123.1| - 4.4e-26 88.8 14.6 1e-05 25.3 0.0 6.1 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21226201|ref|NP_632123.1| - 2.8e-22 77.0 5.5 0.00059 19.9 0.0 5.9 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21226201|ref|NP_632123.1| - 1.2e-21 77.1 7.9 1.2e-08 35.4 0.1 3.8 1 1 2 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21226201|ref|NP_632123.1| - 2.3e-20 71.6 10.5 0.00031 21.3 0.1 6.0 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21226201|ref|NP_632123.1| - 6.4e-19 68.2 3.8 6.9e-05 23.3 0.6 4.7 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21226201|ref|NP_632123.1| - 4.8e-18 64.1 7.5 6.5e-05 22.6 0.0 6.1 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226201|ref|NP_632123.1| - 1.6e-17 62.9 7.1 0.00015 21.4 0.0 5.7 4 2 2 6 6 6 5 TPR repeat TPR_12 PF13424.6 gi|21226201|ref|NP_632123.1| - 7e-13 48.7 16.8 3.3e-05 24.1 0.7 4.7 2 2 1 4 4 4 4 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21226201|ref|NP_632123.1| - 1.5e-08 34.7 7.5 0.00066 19.8 0.2 3.8 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21226201|ref|NP_632123.1| - 1.3e-07 31.1 9.7 0.11 12.6 0.1 5.2 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21226201|ref|NP_632123.1| - 2.7e-07 30.2 12.7 0.41 10.6 0.0 5.4 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_15 PF13429.6 gi|21226201|ref|NP_632123.1| - 8.4e-07 28.5 0.2 0.0015 17.8 0.1 2.7 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_3 PF07720.12 gi|21226201|ref|NP_632123.1| - 1.5e-05 24.9 5.7 0.044 13.8 0.0 4.5 5 0 0 5 5 5 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21226201|ref|NP_632123.1| - 6e-05 23.2 6.4 0.53 10.5 0.2 3.3 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 gi|21226201|ref|NP_632123.1| - 0.00028 19.9 0.5 0.063 12.2 0.1 2.8 2 1 1 3 3 3 1 NMDA receptor-regulated protein 1 TPR_6 PF13174.6 gi|21226201|ref|NP_632123.1| - 0.0014 19.1 5.8 24 5.9 0.0 5.2 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_20 PF14561.6 gi|21226201|ref|NP_632123.1| - 0.0035 17.6 0.1 2 8.8 0.0 3.8 1 1 4 5 5 5 1 Tetratricopeptide repeat DUF627 PF04781.12 gi|21226201|ref|NP_632123.1| - 0.014 15.4 1.1 0.36 10.8 0.1 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF627) TPR_MalT PF17874.1 gi|21226201|ref|NP_632123.1| - 0.019 14.3 1.3 6 6.1 0.2 2.8 1 1 0 2 2 2 0 MalT-like TPR region Metallophos_2 PF12850.7 gi|21226201|ref|NP_632123.1| - 0.025 14.8 0.1 0.033 14.4 0.1 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain DUF4192 PF13830.6 gi|21226201|ref|NP_632123.1| - 0.044 13.8 0.2 1.9 8.5 0.0 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4192) Mad3_BUB1_I PF08311.12 gi|21226201|ref|NP_632123.1| - 0.11 12.5 3.3 29 4.7 0.0 4.0 3 1 0 4 4 4 0 Mad3/BUB1 homology region 1 TPR_21 PF09976.9 gi|21226201|ref|NP_632123.1| - 0.14 11.9 2.8 13 5.4 0.8 4.2 2 1 2 4 4 4 0 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 gi|21226201|ref|NP_632123.1| - 1.1 10.1 10.0 10 7.1 0.5 5.2 6 1 0 6 6 6 0 Tetratricopeptide repeat DUF4219 PF13961.6 gi|21226203|ref|NP_632125.1| - 0.00057 19.5 3.7 0.0016 18.1 3.7 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4219) Metallophos PF00149.28 gi|21226204|ref|NP_632126.1| - 1.6e-25 90.8 0.0 2.2e-25 90.4 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|21226204|ref|NP_632126.1| - 2.2e-07 31.2 0.0 3.1e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|21226204|ref|NP_632126.1| - 0.14 11.4 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily TPR_2 PF07719.17 gi|21226205|ref|NP_632127.1| - 6.1e-40 132.1 37.2 2.2e-06 27.4 1.1 9.4 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21226205|ref|NP_632127.1| - 2.9e-37 124.3 19.1 3.7e-05 23.8 0.0 9.2 10 0 0 10 10 9 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21226205|ref|NP_632127.1| - 2.7e-36 120.7 17.5 4.4e-05 23.3 0.6 8.9 9 0 0 9 9 8 7 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226205|ref|NP_632127.1| - 5.6e-32 109.2 25.6 1.6e-06 27.7 0.3 8.7 4 3 5 9 9 9 7 TPR repeat TPR_19 PF14559.6 gi|21226205|ref|NP_632127.1| - 1.3e-27 96.1 19.6 2.4e-07 31.2 1.2 5.8 3 2 3 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21226205|ref|NP_632127.1| - 3.6e-27 94.7 25.7 5.5e-08 33.3 1.5 5.5 5 1 1 6 6 6 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21226205|ref|NP_632127.1| - 1.1e-25 88.1 21.3 0.0017 19.0 0.2 9.0 1 1 8 9 9 9 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21226205|ref|NP_632127.1| - 1.8e-25 87.7 27.1 8.2e-05 22.3 1.0 8.7 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21226205|ref|NP_632127.1| - 1.2e-19 70.3 27.1 1.4e-06 28.5 2.5 6.7 5 3 2 7 7 6 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21226205|ref|NP_632127.1| - 1.5e-11 43.8 29.3 0.032 14.1 0.1 7.7 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_15 PF13429.6 gi|21226205|ref|NP_632127.1| - 3.7e-11 42.8 3.1 5.4e-05 22.5 0.1 3.5 1 1 1 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21226205|ref|NP_632127.1| - 1.4e-10 40.4 22.3 0.22 11.6 0.0 8.7 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_4 PF07721.14 gi|21226205|ref|NP_632127.1| - 1e-09 38.1 6.9 0.37 11.5 0.5 6.9 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21226205|ref|NP_632127.1| - 8.5e-09 35.5 9.1 0.085 13.0 0.2 4.7 1 1 4 6 6 6 3 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|21226205|ref|NP_632127.1| - 4.8e-05 22.7 0.5 0.34 10.4 0.0 3.1 3 0 0 3 3 3 2 SHNi-TPR DUF627 PF04781.12 gi|21226205|ref|NP_632127.1| - 0.0001 22.3 6.3 1 9.4 0.2 4.9 3 2 2 5 5 5 1 Protein of unknown function (DUF627) TPR_20 PF14561.6 gi|21226205|ref|NP_632127.1| - 0.00014 22.1 4.6 0.13 12.6 0.1 3.6 1 1 1 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21226205|ref|NP_632127.1| - 0.00029 21.0 15.4 0.8 10.0 0.6 4.9 1 1 3 5 5 5 2 Anaphase-promoting complex, cyclosome, subunit 3 BTAD PF03704.17 gi|21226205|ref|NP_632127.1| - 0.0043 17.5 15.9 0.8 10.1 2.3 4.2 2 2 2 4 4 4 2 Bacterial transcriptional activator domain Coatomer_E PF04733.14 gi|21226205|ref|NP_632127.1| - 0.0045 16.4 4.7 0.023 14.1 0.0 3.4 4 1 1 5 5 4 1 Coatomer epsilon subunit TPR_21 PF09976.9 gi|21226205|ref|NP_632127.1| - 0.011 15.5 7.2 11 5.7 0.0 5.5 3 1 2 6 6 6 0 Tetratricopeptide repeat-like domain NARP1 PF12569.8 gi|21226205|ref|NP_632127.1| - 0.046 12.6 10.9 1.4 7.7 0.3 4.1 1 1 3 4 4 4 0 NMDA receptor-regulated protein 1 RAM PF15320.6 gi|21226205|ref|NP_632127.1| - 0.05 14.2 0.2 11 6.7 0.0 2.7 2 1 0 2 2 2 0 mRNA cap methylation, RNMT-activating mini protein TPR_6 PF13174.6 gi|21226205|ref|NP_632127.1| - 0.071 13.8 12.3 38 5.2 0.0 6.7 7 0 0 7 7 6 0 Tetratricopeptide repeat SLT_L PF14718.6 gi|21226205|ref|NP_632127.1| - 0.15 12.2 5.0 9.1 6.5 0.0 4.6 5 0 0 5 5 5 0 Soluble lytic murein transglycosylase L domain OB_Dis3 PF17849.1 gi|21226205|ref|NP_632127.1| - 0.18 11.8 0.0 5.9 7.0 0.0 2.8 3 0 0 3 3 3 0 Dis3-like cold-shock domain 2 (CSD2) TPR_3 PF07720.12 gi|21226205|ref|NP_632127.1| - 4.7 7.3 7.4 6.4 6.9 0.0 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat SpoVAC_SpoVAEB PF03862.13 gi|21226207|ref|NP_632129.1| - 0.0028 17.9 4.1 0.0035 17.6 4.1 1.1 1 0 0 1 1 1 1 SpoVAC/SpoVAEB sporulation membrane protein Gly-zipper_YMGG PF13441.6 gi|21226207|ref|NP_632129.1| - 0.0093 15.7 6.1 0.18 11.5 0.2 2.1 2 0 0 2 2 2 2 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 gi|21226207|ref|NP_632129.1| - 0.015 15.3 5.8 0.021 14.8 5.8 1.3 1 1 0 1 1 1 0 Glycine zipper DUF1269 PF06897.12 gi|21226207|ref|NP_632129.1| - 0.57 10.5 6.8 0.84 10.0 6.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1269) Romo1 PF10247.9 gi|21226207|ref|NP_632129.1| - 1.1 9.7 16.8 0.62 10.5 7.4 2.1 1 1 1 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 FxsA PF04186.13 gi|21226208|ref|NP_632130.1| - 4.2e-33 113.7 5.8 5.4e-33 113.4 5.8 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein LrgB PF04172.16 gi|21226209|ref|NP_632131.1| - 1.1e-76 257.1 15.1 1.3e-76 256.9 15.1 1.0 1 0 0 1 1 1 1 LrgB-like family CbtA PF09490.10 gi|21226209|ref|NP_632131.1| - 0.023 14.4 0.5 0.023 14.4 0.5 2.6 4 0 0 4 4 4 0 Probable cobalt transporter subunit (CbtA) Hemocyanin_N PF03722.14 gi|21226209|ref|NP_632131.1| - 0.056 14.0 0.0 0.089 13.3 0.0 1.2 1 0 0 1 1 1 0 Hemocyanin, all-alpha domain Phage_holin_5_2 PF16079.5 gi|21226209|ref|NP_632131.1| - 0.79 10.1 14.0 2 8.8 1.3 3.7 1 1 1 3 3 3 0 Phage holin family Hol44, in holin superfamily V LrgA PF03788.14 gi|21226210|ref|NP_632132.1| - 6.2e-29 99.8 6.9 7.5e-29 99.5 6.9 1.1 1 0 0 1 1 1 1 LrgA family Aminotran_5 PF00266.19 gi|21226211|ref|NP_632133.1| - 1e-81 274.8 0.0 1.4e-81 274.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|21226211|ref|NP_632133.1| - 8.1e-08 31.9 0.0 1.2e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|21226211|ref|NP_632133.1| - 0.00011 21.7 0.0 0.00016 21.2 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pyridoxal_deC PF00282.19 gi|21226211|ref|NP_632133.1| - 0.032 13.0 0.0 0.048 12.4 0.0 1.2 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain NifU_N PF01592.16 gi|21226212|ref|NP_632134.1| - 1.4e-42 144.9 0.0 1.5e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain CO_deh_flav_C PF03450.17 gi|21226212|ref|NP_632134.1| - 0.0082 16.3 0.1 0.013 15.6 0.1 1.4 1 1 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain RimK PF08443.11 gi|21226213|ref|NP_632135.1| - 8.9e-21 74.3 0.0 1.8e-18 66.9 0.0 2.5 2 1 0 2 2 2 2 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|21226213|ref|NP_632135.1| - 6.3e-15 55.0 0.0 1.4e-14 53.9 0.0 1.5 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain Rimk_N PF18030.1 gi|21226213|ref|NP_632135.1| - 1.5e-08 34.9 0.0 2.7e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 RimK PreATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|21226213|ref|NP_632135.1| - 3.4e-08 33.0 0.0 1.4e-07 31.0 0.0 2.0 1 1 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 gi|21226213|ref|NP_632135.1| - 8.9e-06 25.2 0.1 0.00021 20.7 0.0 2.7 2 2 1 3 3 3 1 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|21226213|ref|NP_632135.1| - 6.7e-05 23.0 0.0 0.00011 22.3 0.0 1.4 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 gi|21226213|ref|NP_632135.1| - 0.021 14.4 0.0 0.091 12.3 0.0 1.9 1 1 1 2 2 2 0 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|21226213|ref|NP_632135.1| - 0.029 13.8 0.1 0.11 11.9 0.1 1.9 1 1 0 1 1 1 0 ATP-grasp domain CP_ATPgrasp_2 PF14403.6 gi|21226213|ref|NP_632135.1| - 0.22 10.4 0.0 0.32 9.9 0.0 1.2 1 0 0 1 1 1 0 Circularly permuted ATP-grasp type 2 PTH2 PF01981.16 gi|21226214|ref|NP_632136.1| - 6.9e-40 136.0 0.1 7.9e-40 135.8 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 TP_methylase PF00590.20 gi|21226214|ref|NP_632136.1| - 0.028 14.3 0.1 0.081 12.8 0.0 1.6 2 0 0 2 2 2 0 Tetrapyrrole (Corrin/Porphyrin) Methylases SAP PF02037.27 gi|21226214|ref|NP_632136.1| - 0.035 13.9 0.4 1.9 8.3 0.1 2.6 2 0 0 2 2 2 0 SAP domain Transglut_core PF01841.19 gi|21226215|ref|NP_632137.1| - 2.2e-06 28.1 0.0 4.4e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Transglutaminase-like superfamily FTZ PF03867.14 gi|21226215|ref|NP_632137.1| - 0.041 13.4 0.4 0.066 12.8 0.4 1.2 1 0 0 1 1 1 0 Fushi tarazu (FTZ), N-terminal region TruD PF01142.18 gi|21226216|ref|NP_632138.1| - 5.1e-161 536.1 0.0 5.8e-161 536.0 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) MatE PF01554.18 gi|21226217|ref|NP_632139.1| - 5.2e-33 114.0 42.1 8.6e-21 74.3 15.1 2.7 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|21226217|ref|NP_632139.1| - 1.6e-11 44.5 31.7 1.3e-09 38.3 17.2 4.3 2 1 3 5 5 5 2 Polysaccharide biosynthesis C-terminal domain MarR PF01047.22 gi|21226218|ref|NP_632140.1| - 1.6e-12 47.2 0.0 3.6e-12 46.0 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|21226218|ref|NP_632140.1| - 1.4e-11 44.7 0.0 2.7e-11 43.8 0.0 1.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|21226218|ref|NP_632140.1| - 2.3e-10 40.2 0.0 3.1e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|21226218|ref|NP_632140.1| - 1.5e-08 34.7 0.1 3.1e-08 33.7 0.1 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|21226218|ref|NP_632140.1| - 4.1e-05 23.4 0.1 8.9e-05 22.3 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|21226218|ref|NP_632140.1| - 0.0003 20.5 0.0 0.00051 19.8 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|21226218|ref|NP_632140.1| - 0.0022 18.3 0.0 0.0044 17.3 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_24 PF13412.6 gi|21226218|ref|NP_632140.1| - 0.003 17.1 0.0 0.0061 16.1 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|21226218|ref|NP_632140.1| - 0.0057 16.6 0.2 0.014 15.3 0.0 1.8 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain SMC_ScpB PF04079.16 gi|21226218|ref|NP_632140.1| - 0.008 15.8 0.0 0.018 14.7 0.0 1.5 1 1 0 1 1 1 1 Segregation and condensation complex subunit ScpB HTH_5 PF01022.20 gi|21226218|ref|NP_632140.1| - 0.013 15.3 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_10 PF04967.12 gi|21226218|ref|NP_632140.1| - 0.041 13.7 0.3 0.19 11.5 0.0 2.3 4 0 0 4 4 4 0 HTH DNA binding domain HTH_20 PF12840.7 gi|21226218|ref|NP_632140.1| - 0.081 13.0 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.6 gi|21226218|ref|NP_632140.1| - 0.13 12.3 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4013 PF13197.6 gi|21226219|ref|NP_632141.1| - 1.8e-11 44.1 18.4 7.1e-11 42.2 18.4 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF4013) CTP_synth_N PF06418.14 gi|21226220|ref|NP_632142.1| - 7.7e-126 418.8 1.6 1.1e-125 418.3 1.6 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|21226220|ref|NP_632142.1| - 1.5e-55 187.9 0.0 3.1e-55 186.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|21226220|ref|NP_632142.1| - 4e-05 23.5 0.0 0.00018 21.3 0.0 2.1 2 1 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|21226220|ref|NP_632142.1| - 0.00021 21.4 0.0 0.001 19.1 0.0 2.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MeaB PF03308.16 gi|21226220|ref|NP_632142.1| - 0.028 13.4 0.2 0.062 12.3 0.2 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DJ-1_PfpI PF01965.24 gi|21226220|ref|NP_632142.1| - 0.044 13.6 0.1 0.3 10.9 0.0 2.3 2 1 0 2 2 2 0 DJ-1/PfpI family Trm112p PF03966.16 gi|21226222|ref|NP_632144.1| - 3e-11 43.7 0.9 4.8e-11 43.1 0.9 1.3 1 1 0 1 1 1 1 Trm112p-like protein Elf1 PF05129.13 gi|21226222|ref|NP_632144.1| - 0.0009 19.2 0.0 0.00098 19.1 0.0 1.0 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Cys_rich_KTR PF14205.6 gi|21226222|ref|NP_632144.1| - 0.0033 17.2 1.6 0.0066 16.2 1.6 1.4 1 1 0 1 1 1 1 Cysteine-rich KTR C1_4 PF07975.12 gi|21226222|ref|NP_632144.1| - 0.0078 16.4 0.0 0.011 16.0 0.0 1.2 1 0 0 1 1 1 1 TFIIH C1-like domain Lar_restr_allev PF14354.6 gi|21226222|ref|NP_632144.1| - 0.008 16.5 0.3 0.011 16.1 0.3 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 gi|21226222|ref|NP_632144.1| - 0.011 15.2 1.4 1.5 8.4 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-Di19 PF05605.12 gi|21226222|ref|NP_632144.1| - 0.013 15.7 2.2 0.12 12.7 2.2 2.0 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-RING_UBOX PF13445.6 gi|21226222|ref|NP_632144.1| - 0.018 15.1 2.6 1.2 9.2 0.5 2.1 2 0 0 2 2 2 0 RING-type zinc-finger zf-C3HC4_5 PF17121.5 gi|21226222|ref|NP_632144.1| - 0.02 14.8 0.7 3.3 7.7 0.0 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-WRNIP1_ubi PF18279.1 gi|21226222|ref|NP_632144.1| - 0.028 15.1 0.6 7 7.5 0.0 2.3 2 0 0 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain zf-piccolo PF05715.13 gi|21226222|ref|NP_632144.1| - 0.03 14.5 0.6 1.8 8.8 0.1 2.0 2 0 0 2 2 2 0 Piccolo Zn-finger Zn-C2H2_12 PF18112.1 gi|21226222|ref|NP_632144.1| - 0.074 13.5 6.4 0.28 11.7 0.7 2.2 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain YacG PF03884.14 gi|21226222|ref|NP_632144.1| - 0.079 12.7 0.6 11 5.9 0.1 2.2 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG CoiA PF06054.11 gi|21226222|ref|NP_632144.1| - 0.1 11.7 0.3 0.14 11.2 0.1 1.3 1 1 1 2 2 2 0 Competence protein CoiA-like family zf-RRPl_C4 PF17026.5 gi|21226222|ref|NP_632144.1| - 0.11 12.6 0.4 0.2 11.7 0.4 1.6 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type DpnI PF06044.12 gi|21226222|ref|NP_632144.1| - 0.17 11.5 0.1 0.2 11.3 0.1 1.0 1 0 0 1 1 1 0 Dam-replacing family DUF3797 PF12677.7 gi|21226222|ref|NP_632144.1| - 0.18 11.7 5.5 3 7.8 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) Anti-TRAP PF15777.5 gi|21226222|ref|NP_632144.1| - 0.39 10.7 2.7 12 6.0 2.8 2.1 1 1 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein DNA_ligase_ZBD PF03119.16 gi|21226222|ref|NP_632144.1| - 0.96 9.5 7.3 6.2 6.9 0.3 2.5 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Rad50_zn_hook PF04423.14 gi|21226222|ref|NP_632144.1| - 1 9.2 5.6 1.9 8.4 0.3 2.3 1 1 1 2 2 2 0 Rad50 zinc hook motif Prim_Zn_Ribbon PF08273.12 gi|21226222|ref|NP_632144.1| - 1.4 9.2 5.3 9.4 6.6 5.3 1.9 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase Prismane PF03063.20 gi|21226223|ref|NP_632145.1| - 1.8e-169 564.8 1.7 2.1e-169 564.5 1.7 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family E3_binding PF02817.17 gi|21226223|ref|NP_632145.1| - 0.27 11.6 1.3 1.2 9.6 0.1 2.7 3 0 0 3 3 3 0 e3 binding domain Fer4_11 PF13247.6 gi|21226224|ref|NP_632146.1| - 2.9e-12 46.6 17.4 2e-07 31.1 6.8 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21226224|ref|NP_632146.1| - 1.1e-11 45.1 26.6 1.9e-06 28.4 9.9 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21226224|ref|NP_632146.1| - 3.3e-10 40.0 27.1 0.00012 22.2 9.2 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21226224|ref|NP_632146.1| - 4.8e-10 39.1 31.5 0.0099 15.9 0.7 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21226224|ref|NP_632146.1| - 1.5e-09 37.8 26.6 0.00028 20.9 9.4 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21226224|ref|NP_632146.1| - 1.9e-08 33.9 32.2 0.0031 17.5 2.5 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4 PF00037.27 gi|21226224|ref|NP_632146.1| - 1.3e-07 31.1 37.7 0.0077 16.0 3.8 5.7 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21226224|ref|NP_632146.1| - 6.7e-06 26.5 26.5 7.3e-05 23.1 7.6 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21226224|ref|NP_632146.1| - 0.00084 20.1 16.6 0.0034 18.2 3.5 4.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21226224|ref|NP_632146.1| - 0.0015 19.4 31.5 0.069 14.1 2.3 4.8 1 1 3 4 4 4 3 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|21226224|ref|NP_632146.1| - 0.0021 18.5 22.4 0.35 11.4 0.2 4.2 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21226224|ref|NP_632146.1| - 0.0075 16.7 34.6 0.033 14.7 4.2 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21226224|ref|NP_632146.1| - 1.1 9.4 34.0 3 8.1 12.2 4.0 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|21226224|ref|NP_632146.1| - 1.3 8.9 24.0 1.5 8.7 0.2 3.5 2 1 1 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Usp PF00582.26 gi|21226225|ref|NP_632147.1| - 3.4e-35 121.6 0.7 3.9e-35 121.4 0.7 1.0 1 0 0 1 1 1 1 Universal stress protein family VWA PF00092.28 gi|21226225|ref|NP_632147.1| - 0.075 13.3 0.1 0.36 11.0 0.0 1.9 1 1 1 2 2 2 0 von Willebrand factor type A domain Gate PF07670.14 gi|21226226|ref|NP_632148.1| - 4.6e-09 36.6 18.0 1.2e-05 25.6 2.1 2.9 2 2 0 2 2 2 2 Nucleoside recognition Usp PF00582.26 gi|21226227|ref|NP_632149.1| - 4.5e-38 130.9 1.2 5.1e-38 130.8 1.2 1.0 1 0 0 1 1 1 1 Universal stress protein family GYD PF08734.11 gi|21226227|ref|NP_632149.1| - 0.057 13.4 0.7 0.44 10.5 0.1 2.1 2 0 0 2 2 2 0 GYD domain FR47 PF08445.10 gi|21226227|ref|NP_632149.1| - 0.062 13.3 0.1 0.64 10.0 0.0 2.3 2 1 0 2 2 2 0 FR47-like protein NTP_transferase PF00483.23 gi|21226227|ref|NP_632149.1| - 0.11 12.1 0.1 0.12 12.0 0.1 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase PmbA_TldD PF01523.16 gi|21226228|ref|NP_632150.1| - 6.1e-54 183.7 2.3 9.4e-54 183.1 2.3 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|21226229|ref|NP_632151.1| - 4.4e-66 223.6 0.4 4.4e-66 223.6 0.4 1.4 2 0 0 2 2 2 1 Putative modulator of DNA gyrase Lon_C PF05362.13 gi|21226230|ref|NP_632152.1| - 1.2e-32 113.1 5.9 2.3e-32 112.2 5.9 1.5 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.6 gi|21226230|ref|NP_632152.1| - 1.3e-27 96.8 0.0 3.9e-20 72.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|21226230|ref|NP_632152.1| - 9.9e-17 61.0 0.1 5.6e-10 39.0 0.1 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|21226230|ref|NP_632152.1| - 2.4e-15 56.7 0.0 1.1e-08 35.0 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain ChlI PF13541.6 gi|21226230|ref|NP_632152.1| - 5.5e-11 42.4 0.6 1.1e-10 41.4 0.6 1.5 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.14 gi|21226230|ref|NP_632152.1| - 1.7e-10 41.0 0.0 0.0002 21.4 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|21226230|ref|NP_632152.1| - 1.7e-07 31.7 0.0 0.0035 17.8 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|21226230|ref|NP_632152.1| - 2.1e-06 27.0 2.0 0.029 13.5 0.0 3.3 4 0 0 4 4 4 2 MCM P-loop domain AAA_22 PF13401.6 gi|21226230|ref|NP_632152.1| - 2.7e-05 24.5 0.0 0.0014 18.9 0.0 2.7 3 0 0 3 3 2 1 AAA domain RuvB_N PF05496.12 gi|21226230|ref|NP_632152.1| - 0.00019 21.2 0.0 0.089 12.5 0.0 2.5 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_3 PF07726.11 gi|21226230|ref|NP_632152.1| - 0.00026 20.8 0.0 0.98 9.3 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|21226230|ref|NP_632152.1| - 0.00036 20.9 0.5 0.0088 16.4 0.5 2.6 1 1 0 1 1 1 1 AAA domain AAA_7 PF12775.7 gi|21226230|ref|NP_632152.1| - 0.00044 19.8 0.0 0.0026 17.3 0.0 2.1 2 0 0 2 2 2 1 P-loop containing dynein motor region Sigma54_activ_2 PF14532.6 gi|21226230|ref|NP_632152.1| - 0.00048 20.3 0.0 0.21 11.7 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_16 PF13191.6 gi|21226230|ref|NP_632152.1| - 0.0032 17.9 0.0 0.2 12.0 0.0 2.7 3 0 0 3 3 3 1 AAA ATPase domain TIP49 PF06068.13 gi|21226230|ref|NP_632152.1| - 0.0035 16.6 0.0 1.8 7.7 0.0 2.3 2 0 0 2 2 2 2 TIP49 P-loop domain PhoH PF02562.16 gi|21226230|ref|NP_632152.1| - 0.0047 16.4 0.0 0.014 14.8 0.0 1.7 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.6 gi|21226230|ref|NP_632152.1| - 0.0053 16.5 0.0 0.026 14.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 gi|21226230|ref|NP_632152.1| - 0.01 15.0 0.0 0.039 13.0 0.0 1.9 2 0 0 2 2 2 1 Type II/IV secretion system protein Parvo_NS1 PF01057.17 gi|21226230|ref|NP_632152.1| - 0.011 14.9 0.0 0.019 14.1 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_18 PF13238.6 gi|21226230|ref|NP_632152.1| - 0.018 15.6 0.0 0.065 13.8 0.0 2.0 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|21226230|ref|NP_632152.1| - 0.02 14.6 0.0 0.067 12.9 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_33 PF13671.6 gi|21226230|ref|NP_632152.1| - 0.032 14.4 0.0 0.082 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|21226230|ref|NP_632152.1| - 0.033 13.3 0.0 0.062 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) TrwB_AAD_bind PF10412.9 gi|21226230|ref|NP_632152.1| - 0.055 12.4 0.0 0.097 11.6 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_2 PF07724.14 gi|21226230|ref|NP_632152.1| - 0.069 13.3 0.9 14 5.8 0.0 3.0 3 1 0 3 3 2 0 AAA domain (Cdc48 subfamily) AAA_28 PF13521.6 gi|21226230|ref|NP_632152.1| - 0.075 13.3 0.0 0.28 11.4 0.0 2.1 2 0 0 2 2 1 0 AAA domain ABC_tran PF00005.27 gi|21226230|ref|NP_632152.1| - 0.078 13.5 0.0 0.31 11.6 0.0 2.0 2 0 0 2 2 1 0 ABC transporter ResIII PF04851.15 gi|21226230|ref|NP_632152.1| - 0.092 12.7 0.0 0.47 10.4 0.0 2.0 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit Styelin PF17562.2 gi|21226230|ref|NP_632152.1| - 0.099 13.0 0.0 0.27 11.6 0.0 1.7 1 0 0 1 1 1 0 Styelin TPR_2 PF07719.17 gi|21226231|ref|NP_632153.1| - 7.1e-15 53.9 15.9 4.3e-05 23.3 1.2 6.0 5 1 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21226231|ref|NP_632153.1| - 7.8e-15 54.9 13.1 1.1e-05 25.7 1.4 4.3 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21226231|ref|NP_632153.1| - 1.8e-11 43.3 16.9 4.7e-05 23.0 2.4 5.7 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21226231|ref|NP_632153.1| - 5.3e-10 38.8 11.0 9.6e-05 22.1 0.1 5.2 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|21226231|ref|NP_632153.1| - 1.8e-09 37.5 0.7 0.00061 19.3 0.0 2.6 1 1 1 2 2 2 2 MalT-like TPR region TPR_8 PF13181.6 gi|21226231|ref|NP_632153.1| - 3.3e-09 36.2 21.6 0.0031 17.6 0.4 5.7 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21226231|ref|NP_632153.1| - 9.6e-09 35.4 7.2 0.053 14.4 0.2 5.8 4 2 1 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21226231|ref|NP_632153.1| - 1.5e-07 31.8 18.9 0.16 12.5 0.2 5.8 3 1 2 5 5 5 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21226231|ref|NP_632153.1| - 4.7e-07 30.0 9.4 1.2 9.9 0.5 6.0 5 2 1 6 6 6 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21226231|ref|NP_632153.1| - 5.6e-06 26.9 3.8 0.012 16.3 0.1 4.6 3 1 2 5 5 5 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226231|ref|NP_632153.1| - 5.7e-05 22.7 24.5 0.037 13.7 4.5 6.6 4 2 1 5 5 5 2 TPR repeat SPO22 PF08631.10 gi|21226231|ref|NP_632153.1| - 8.4e-05 22.2 8.4 0.00047 19.7 0.4 2.5 2 1 0 2 2 2 1 Meiosis protein SPO22/ZIP4 like PTS_IIA PF02255.16 gi|21226231|ref|NP_632153.1| - 0.00019 21.4 11.0 0.88 9.7 0.0 4.4 2 1 3 5 5 5 2 PTS system, Lactose/Cellobiose specific IIA subunit TPR_7 PF13176.6 gi|21226231|ref|NP_632153.1| - 0.00026 20.8 7.6 0.46 10.6 0.1 5.3 5 1 0 5 5 5 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|21226231|ref|NP_632153.1| - 0.00048 20.1 7.8 3 8.0 0.1 4.9 4 1 0 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.8 gi|21226231|ref|NP_632153.1| - 0.00061 18.8 14.8 0.08 11.8 1.1 3.1 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 TPR_17 PF13431.6 gi|21226231|ref|NP_632153.1| - 0.0012 19.1 13.1 0.08 13.4 0.2 5.5 5 3 0 5 5 4 2 Tetratricopeptide repeat TPR_21 PF09976.9 gi|21226231|ref|NP_632153.1| - 0.0022 17.7 2.4 0.0022 17.7 2.4 3.3 3 1 1 4 4 3 1 Tetratricopeptide repeat-like domain TOM20_plant PF06552.12 gi|21226231|ref|NP_632153.1| - 0.0023 17.7 8.1 1.8 8.2 0.2 3.8 1 1 2 3 3 3 2 Plant specific mitochondrial import receptor subunit TOM20 Arfaptin PF06456.13 gi|21226231|ref|NP_632153.1| - 0.0024 17.5 2.1 0.022 14.3 0.4 2.2 2 0 0 2 2 2 1 Arfaptin-like domain ANAPC3 PF12895.7 gi|21226231|ref|NP_632153.1| - 0.015 15.5 10.5 0.25 11.6 1.3 4.4 2 1 3 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 MetOD2 PF18548.1 gi|21226231|ref|NP_632153.1| - 0.019 15.1 1.6 0.1 12.7 0.3 2.6 1 1 1 2 2 2 0 Metanogen output domain 2 ArnB_C PF18677.1 gi|21226231|ref|NP_632153.1| - 0.02 15.0 4.1 0.65 10.1 0.2 3.5 3 0 0 3 3 3 0 Archaellum regulatory network B, C-terminal domain YfdX PF10938.8 gi|21226231|ref|NP_632153.1| - 0.056 13.4 11.5 0.25 11.3 0.4 4.0 3 2 1 4 4 4 0 YfdX protein SHNi-TPR PF10516.9 gi|21226231|ref|NP_632153.1| - 0.057 12.9 9.2 3.9 7.0 0.5 3.8 3 0 0 3 3 3 0 SHNi-TPR PUL PF08324.11 gi|21226231|ref|NP_632153.1| - 0.061 12.6 0.3 0.061 12.6 0.3 1.7 2 0 0 2 2 2 0 PUL domain Pkinase_fungal PF17667.1 gi|21226231|ref|NP_632153.1| - 0.12 11.1 0.1 0.24 10.1 0.1 1.6 1 1 0 1 1 1 0 Fungal protein kinase TPR_3 PF07720.12 gi|21226231|ref|NP_632153.1| - 0.15 12.1 10.5 1.3 9.1 0.3 4.6 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_5 PF12688.7 gi|21226231|ref|NP_632153.1| - 0.39 11.0 3.4 0.7 10.2 0.1 2.8 2 2 1 3 3 3 0 Tetratrico peptide repeat DUF445 PF04286.12 gi|21226231|ref|NP_632153.1| - 0.4 10.4 5.1 0.61 9.8 5.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF445) Cytochrom_B562 PF07361.11 gi|21226231|ref|NP_632153.1| - 0.56 10.9 8.5 17 6.1 0.1 3.5 3 1 0 3 3 3 0 Cytochrome b562 Ribosomal_L22 PF00237.19 gi|21226231|ref|NP_632153.1| - 0.64 10.3 4.0 2.8 8.2 4.0 2.2 1 1 0 1 1 1 0 Ribosomal protein L22p/L17e PPR_1 PF12854.7 gi|21226231|ref|NP_632153.1| - 1.8 8.3 4.3 7.2 6.4 0.1 3.1 4 0 0 4 4 3 0 PPR repeat DUF4398 PF14346.6 gi|21226231|ref|NP_632153.1| - 2.8 8.6 15.3 21 5.8 0.1 4.2 4 1 0 4 4 4 0 Domain of unknown function (DUF4398) MIT PF04212.18 gi|21226231|ref|NP_632153.1| - 4.5 7.4 18.3 0.48 10.5 1.4 4.8 4 1 1 5 5 5 0 MIT (microtubule interacting and transport) domain PPR PF01535.20 gi|21226231|ref|NP_632153.1| - 6.3 7.3 8.9 49 4.5 0.0 4.9 6 0 0 6 6 5 0 PPR repeat Peptidase_M3_N PF08439.10 gi|21226231|ref|NP_632153.1| - 7.1 7.0 7.7 0.83 10.0 0.1 3.1 3 1 0 3 3 3 0 Oligopeptidase F RAMP PF04901.13 gi|21226232|ref|NP_632154.1| - 0.024 14.6 0.0 0.041 13.9 0.0 1.4 1 1 0 1 1 1 0 Receptor activity modifying family DUF4191 PF13829.6 gi|21226232|ref|NP_632154.1| - 0.43 9.9 2.1 0.5 9.7 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) TPR_12 PF13424.6 gi|21226233|ref|NP_632155.1| - 7.4e-25 87.1 6.5 5.4e-10 39.4 0.3 4.7 3 2 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21226233|ref|NP_632155.1| - 3.6e-24 83.5 5.7 2.6e-06 27.0 0.2 6.3 5 1 1 6 6 6 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21226233|ref|NP_632155.1| - 3.3e-20 70.5 6.1 6.6e-06 25.8 0.2 6.5 5 2 2 7 7 7 6 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21226233|ref|NP_632155.1| - 5.9e-20 70.5 1.3 4.5e-07 29.5 0.0 5.4 5 1 1 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21226233|ref|NP_632155.1| - 7.7e-15 53.8 13.0 0.00012 22.0 0.3 5.7 6 0 0 6 6 5 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21226233|ref|NP_632155.1| - 6.4e-14 50.9 0.6 0.00093 19.1 0.1 5.2 5 1 0 5 5 5 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21226233|ref|NP_632155.1| - 2.2e-08 34.2 1.7 0.3 12.0 0.0 5.5 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21226233|ref|NP_632155.1| - 3e-08 33.8 3.2 0.00074 20.0 0.2 6.0 5 3 1 6 6 5 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226233|ref|NP_632155.1| - 1.1e-07 31.4 5.2 0.026 14.2 0.4 5.6 5 2 1 6 6 6 2 TPR repeat TPR_MalT PF17874.1 gi|21226233|ref|NP_632155.1| - 4.2e-07 29.7 0.5 0.00081 18.9 0.1 2.4 1 1 2 3 3 3 3 MalT-like TPR region TPR_21 PF09976.9 gi|21226233|ref|NP_632155.1| - 2.9e-05 23.9 2.1 0.058 13.1 0.0 2.9 2 1 1 3 3 3 2 Tetratricopeptide repeat-like domain TetR_C_19 PF17924.1 gi|21226233|ref|NP_632155.1| - 0.00016 22.2 3.0 0.52 10.9 0.6 3.4 3 0 0 3 3 3 1 Tetracyclin repressor-like, C-terminal domain TPR_17 PF13431.6 gi|21226233|ref|NP_632155.1| - 0.00018 21.7 10.5 0.1 13.0 0.0 5.6 4 1 0 4 4 4 1 Tetratricopeptide repeat RPN6_N PF18055.1 gi|21226233|ref|NP_632155.1| - 0.0002 21.7 3.4 0.0002 21.7 3.4 2.6 3 1 1 4 4 4 1 26S proteasome regulatory subunit RPN6 N-terminal domain TPR_16 PF13432.6 gi|21226233|ref|NP_632155.1| - 0.00029 21.4 0.3 0.91 10.2 0.0 4.1 4 1 0 4 4 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21226233|ref|NP_632155.1| - 0.0003 21.3 10.1 1.6 9.3 0.5 4.5 3 1 1 4 4 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21226233|ref|NP_632155.1| - 0.0017 18.5 0.1 4.2 7.6 0.0 3.8 3 2 1 4 4 4 1 Tetratricopeptide repeat Sec16_C PF12931.7 gi|21226233|ref|NP_632155.1| - 0.003 17.3 0.5 0.1 12.3 0.1 2.2 1 1 0 2 2 2 1 Sec23-binding domain of Sec16 Fis1_TPR_C PF14853.6 gi|21226233|ref|NP_632155.1| - 0.0072 16.4 4.1 5.1 7.2 0.0 3.9 4 0 0 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat TOM20_plant PF06552.12 gi|21226233|ref|NP_632155.1| - 0.0098 15.7 3.7 0.49 10.1 0.1 3.9 1 1 4 5 5 5 1 Plant specific mitochondrial import receptor subunit TOM20 TPR_3 PF07720.12 gi|21226233|ref|NP_632155.1| - 0.012 15.6 0.9 5.1 7.2 0.0 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|21226233|ref|NP_632155.1| - 0.014 14.8 6.4 0.16 11.4 0.7 3.7 3 0 0 3 3 3 0 SHNi-TPR YfdX PF10938.8 gi|21226233|ref|NP_632155.1| - 0.014 15.3 7.6 0.16 11.9 0.2 3.1 2 1 0 3 3 3 0 YfdX protein p25-alpha PF05517.12 gi|21226233|ref|NP_632155.1| - 0.015 15.4 1.7 0.031 14.4 1.7 1.5 1 0 0 1 1 1 0 p25-alpha Rubredoxin_C PF18267.1 gi|21226233|ref|NP_632155.1| - 0.02 14.8 0.1 0.29 11.1 0.0 2.5 2 0 0 2 2 2 0 Rubredoxin NAD+ reductase C-terminal domain TPR_4 PF07721.14 gi|21226233|ref|NP_632155.1| - 0.038 14.6 0.0 12 6.9 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat SNAP PF14938.6 gi|21226233|ref|NP_632155.1| - 0.043 13.2 4.3 0.57 9.6 4.6 2.2 1 1 1 2 2 2 0 Soluble NSF attachment protein, SNAP Alkyl_sulf_dimr PF14863.6 gi|21226233|ref|NP_632155.1| - 0.091 13.2 1.6 29 5.1 0.0 3.6 1 1 2 4 4 4 0 Alkyl sulfatase dimerisation MIT PF04212.18 gi|21226233|ref|NP_632155.1| - 0.1 12.7 20.9 1.3 9.2 1.3 4.9 4 2 1 5 5 5 0 MIT (microtubule interacting and transport) domain RPN7 PF10602.9 gi|21226233|ref|NP_632155.1| - 0.18 11.5 5.3 2.7 7.7 0.1 2.9 1 1 2 3 3 3 0 26S proteasome subunit RPN7 ANAPC5 PF12862.7 gi|21226233|ref|NP_632155.1| - 0.44 10.6 3.6 0.99 9.5 0.3 3.0 2 2 2 4 4 4 0 Anaphase-promoting complex subunit 5 FliS PF02561.14 gi|21226233|ref|NP_632155.1| - 0.84 9.9 6.1 2 8.7 0.2 2.7 2 1 0 2 2 2 0 Flagellar protein FliS PTS_IIA PF02255.16 gi|21226233|ref|NP_632155.1| - 1.1 9.3 5.0 10 6.3 0.4 2.7 3 0 0 3 3 2 0 PTS system, Lactose/Cellobiose specific IIA subunit PALP PF00291.25 gi|21226235|ref|NP_632157.1| - 6.7e-40 137.3 0.0 8.6e-40 137.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TPP_enzyme_C PF02775.21 gi|21226236|ref|NP_632158.1| - 2.1e-19 69.8 0.1 7.3e-18 64.8 0.1 2.5 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.18 gi|21226236|ref|NP_632158.1| - 2.5e-11 43.5 0.0 7.2e-11 42.0 0.0 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HcyBio PF01837.16 gi|21226237|ref|NP_632159.1| - 8e-105 350.5 0.0 9.1e-105 350.3 0.0 1.0 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation Fer4 PF00037.27 gi|21226237|ref|NP_632159.1| - 1.2e-05 24.9 14.5 0.0032 17.2 0.6 3.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21226237|ref|NP_632159.1| - 0.00014 22.0 10.2 0.00036 20.6 10.2 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21226237|ref|NP_632159.1| - 0.00038 20.4 12.5 0.014 15.4 3.2 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21226237|ref|NP_632159.1| - 0.00088 19.8 12.2 0.0076 16.8 12.1 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21226237|ref|NP_632159.1| - 0.0016 18.5 12.1 0.0045 17.1 12.1 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21226237|ref|NP_632159.1| - 0.0085 16.1 12.9 0.04 14.0 4.5 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21226237|ref|NP_632159.1| - 0.042 14.1 3.5 0.07 13.3 2.6 1.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21226237|ref|NP_632159.1| - 0.17 12.0 12.7 0.19 11.9 10.1 2.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21226237|ref|NP_632159.1| - 1.2 9.9 12.5 4 8.2 2.0 3.0 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21226237|ref|NP_632159.1| - 2 9.4 11.1 8.2 7.4 2.7 2.5 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|21226237|ref|NP_632159.1| - 7.8 7.0 12.6 4.3 7.9 0.8 2.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain Lactamase_B PF00753.27 gi|21226238|ref|NP_632160.1| - 2.2e-15 57.2 0.1 3.1e-15 56.7 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|21226238|ref|NP_632160.1| - 7.7e-06 25.6 0.1 1.2e-05 24.9 0.1 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain ThiS PF02597.20 gi|21226239|ref|NP_632161.1| - 0.00023 21.7 1.5 0.00033 21.2 1.5 1.3 1 1 0 1 1 1 1 ThiS family HTH_34 PF13601.6 gi|21226240|ref|NP_632162.1| - 0.014 15.6 0.0 0.03 14.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain DSPc PF00782.20 gi|21226240|ref|NP_632162.1| - 0.023 14.5 0.7 0.15 11.8 0.1 2.1 1 1 1 2 2 2 0 Dual specificity phosphatase, catalytic domain TrmB PF01978.19 gi|21226240|ref|NP_632162.1| - 0.054 13.4 0.1 0.13 12.2 0.0 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Cytochrom_C_asm PF01578.20 gi|21226241|ref|NP_632163.1| - 1.9e-25 89.9 28.4 1.9e-25 89.9 28.4 2.5 2 1 1 3 3 3 2 Cytochrome C assembly protein CcmF_C PF16327.5 gi|21226242|ref|NP_632164.1| - 3.8e-14 52.7 3.1 7e-14 51.8 3.1 1.4 1 1 0 1 1 1 1 Cytochrome c-type biogenesis protein CcmF C-terminal ResB PF05140.14 gi|21226242|ref|NP_632164.1| - 6.8e-08 31.7 0.5 0.00055 18.8 0.1 2.1 2 0 0 2 2 2 2 ResB-like family CarS-like PF01864.17 gi|21226243|ref|NP_632165.1| - 1.3e-46 158.7 0.9 1.5e-46 158.6 0.9 1.0 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|21226243|ref|NP_632165.1| - 1.7e-06 28.0 2.9 1.7e-06 28.0 2.9 1.9 1 1 1 2 2 2 1 Cytidylyltransferase family DUF5518 PF17647.1 gi|21226243|ref|NP_632165.1| - 0.8 9.9 9.9 0.76 9.9 1.5 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5518) Pribosyltran PF00156.27 gi|21226244|ref|NP_632166.1| - 9.3e-14 51.2 1.7 1.4e-13 50.6 1.7 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|21226244|ref|NP_632166.1| - 0.11 11.9 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase CMD PF02627.20 gi|21226245|ref|NP_632167.1| - 2.3e-12 46.8 0.1 2.5e-12 46.6 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family 4HPAD_g_N PF18671.1 gi|21226245|ref|NP_632167.1| - 0.061 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal DUF3489 PF11994.8 gi|21226245|ref|NP_632167.1| - 0.074 13.1 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) ATP-sulfurylase PF01747.17 gi|21226245|ref|NP_632167.1| - 0.13 11.7 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 ATP-sulfurylase GARS_A PF01071.19 gi|21226246|ref|NP_632168.1| - 1.5e-56 191.2 0.0 3.1e-56 190.2 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|21226246|ref|NP_632168.1| - 3.2e-26 91.9 0.2 6.2e-26 91.0 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|21226246|ref|NP_632168.1| - 4.7e-15 55.6 1.1 1.1e-14 54.5 0.5 2.0 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_3 PF02655.14 gi|21226246|ref|NP_632168.1| - 0.0025 17.9 0.0 0.0046 17.0 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|21226246|ref|NP_632168.1| - 0.023 14.3 0.0 0.058 13.0 0.0 1.7 1 0 0 1 1 1 0 ATP-grasp domain LpxI_N PF17930.1 gi|21226246|ref|NP_632168.1| - 0.044 13.7 0.1 0.21 11.5 0.1 2.2 2 0 0 2 2 2 0 LpxI N-terminal domain GSH-S_ATP PF02955.16 gi|21226246|ref|NP_632168.1| - 0.067 12.6 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain GFO_IDH_MocA PF01408.22 gi|21226246|ref|NP_632168.1| - 0.089 13.6 0.1 0.37 11.6 0.0 2.1 3 0 0 3 3 3 0 Oxidoreductase family, NAD-binding Rossmann fold QRPTase_N PF02749.16 gi|21226246|ref|NP_632168.1| - 0.089 12.9 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, N-terminal domain CPSase_L_D2 PF02786.17 gi|21226246|ref|NP_632168.1| - 0.1 12.1 0.0 0.24 10.8 0.0 1.7 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain OTCace PF00185.24 gi|161485684|ref|NP_632169.2| - 5.6e-59 198.7 0.0 7.7e-59 198.3 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|161485684|ref|NP_632169.2| - 9.6e-53 178.2 0.0 1.3e-52 177.7 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DUF4107 PF13389.6 gi|161485684|ref|NP_632169.2| - 0.16 12.1 0.0 2.9 8.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4107) TrmB PF01978.19 gi|21226248|ref|NP_632170.1| - 5.3e-18 64.7 0.2 1e-17 63.8 0.2 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|21226248|ref|NP_632170.1| - 0.00021 20.6 0.1 0.00031 20.0 0.1 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB Penicillinase_R PF03965.16 gi|21226248|ref|NP_632170.1| - 0.027 14.8 0.2 0.17 12.3 0.1 2.4 3 1 0 3 3 3 0 Penicillinase repressor PadR PF03551.14 gi|21226248|ref|NP_632170.1| - 0.069 13.1 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family SpoOE-like PF09388.10 gi|21226248|ref|NP_632170.1| - 0.071 13.0 0.9 0.19 11.7 0.9 1.8 1 0 0 1 1 1 0 Spo0E like sporulation regulatory protein PLDc_2 PF13091.6 gi|21226248|ref|NP_632170.1| - 0.087 12.7 0.4 0.15 12.0 0.4 1.5 1 1 0 1 1 1 0 PLD-like domain GntR PF00392.21 gi|21226248|ref|NP_632170.1| - 0.15 11.8 0.0 0.32 10.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family FMN_red PF03358.15 gi|21226249|ref|NP_632171.1| - 2.4e-27 95.6 0.0 3.5e-27 95.0 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21226249|ref|NP_632171.1| - 5.8e-12 45.7 0.0 9.4e-12 45.0 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Benyvirus_P25 PF05744.11 gi|21226249|ref|NP_632171.1| - 0.046 13.0 0.0 0.062 12.6 0.0 1.1 1 0 0 1 1 1 0 Benyvirus P25/P26 protein DUF169 PF02596.15 gi|21226250|ref|NP_632172.1| - 1.8e-39 135.8 0.0 2.1e-39 135.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 adh_short PF00106.25 gi|21226251|ref|NP_632173.1| - 3.7e-15 55.9 0.1 4.3e-15 55.7 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|21226251|ref|NP_632173.1| - 3.9e-08 33.1 0.1 4.9e-08 32.8 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|21226251|ref|NP_632173.1| - 9.8e-08 32.1 0.0 1.2e-07 31.9 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|21226251|ref|NP_632173.1| - 6.9e-05 22.4 0.0 7.8e-05 22.2 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 gi|21226251|ref|NP_632173.1| - 7.2e-05 23.3 0.1 7.8e-05 23.2 0.1 1.1 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Polysacc_synt_2 PF02719.15 gi|21226251|ref|NP_632173.1| - 0.0014 17.9 0.1 0.0014 17.8 0.1 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3HCDH_N PF02737.18 gi|21226251|ref|NP_632173.1| - 0.0025 17.7 0.0 0.0025 17.7 0.0 1.0 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rossmann-like PF10727.9 gi|21226251|ref|NP_632173.1| - 0.003 17.4 0.0 0.0038 17.1 0.0 1.2 1 0 0 1 1 1 1 Rossmann-like domain TrkA_N PF02254.18 gi|21226251|ref|NP_632173.1| - 0.0049 17.1 0.1 0.0051 17.1 0.1 1.1 1 0 0 1 1 1 1 TrkA-N domain RmlD_sub_bind PF04321.17 gi|21226251|ref|NP_632173.1| - 0.0054 15.9 0.0 0.006 15.7 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain GDP_Man_Dehyd PF16363.5 gi|21226251|ref|NP_632173.1| - 0.0058 16.1 0.0 0.0063 15.9 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Pyr_redox PF00070.27 gi|21226251|ref|NP_632173.1| - 0.0079 16.7 0.0 0.0092 16.5 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|21226251|ref|NP_632173.1| - 0.017 15.4 0.1 0.021 15.1 0.1 1.0 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 gi|21226251|ref|NP_632173.1| - 0.031 14.2 0.0 0.034 14.0 0.0 1.0 1 0 0 1 1 1 0 NAD(P)H-binding Helicase_RecD PF05127.14 gi|21226251|ref|NP_632173.1| - 0.034 14.0 0.0 0.035 14.0 0.0 1.0 1 0 0 1 1 1 0 Helicase CbiJ PF02571.14 gi|21226251|ref|NP_632173.1| - 0.041 13.3 0.0 0.048 13.1 0.0 1.0 1 0 0 1 1 1 0 Precorrin-6x reductase CbiJ/CobK NAD_binding_2 PF03446.15 gi|21226251|ref|NP_632173.1| - 0.056 13.6 0.0 0.059 13.5 0.0 1.1 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase 3Beta_HSD PF01073.19 gi|21226251|ref|NP_632173.1| - 0.068 12.2 0.0 0.075 12.0 0.0 1.0 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family 2-Hacid_dh_C PF02826.19 gi|21226251|ref|NP_632173.1| - 0.1 11.9 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DFP PF04127.15 gi|21226251|ref|NP_632173.1| - 0.11 12.3 0.3 0.18 11.6 0.2 1.4 1 1 1 2 2 2 0 DNA / pantothenate metabolism flavoprotein ADH_zinc_N PF00107.26 gi|21226251|ref|NP_632173.1| - 0.12 12.4 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 Zinc-binding dehydrogenase NmrA PF05368.13 gi|21226252|ref|NP_632174.1| - 1.9e-29 102.9 0.0 2.3e-29 102.6 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 gi|21226252|ref|NP_632174.1| - 1.1e-18 67.8 0.0 1.9e-18 67.0 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|21226252|ref|NP_632174.1| - 4.5e-07 29.6 0.0 2.7e-06 27.0 0.0 2.3 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|21226252|ref|NP_632174.1| - 7.4e-06 25.2 0.0 1.9e-05 23.8 0.0 1.7 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|21226252|ref|NP_632174.1| - 0.0016 17.7 0.1 0.0035 16.5 0.0 1.5 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein adh_short PF00106.25 gi|21226252|ref|NP_632174.1| - 0.0041 16.6 0.0 0.0072 15.8 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|21226252|ref|NP_632174.1| - 0.0075 16.3 0.0 0.017 15.1 0.0 1.6 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TrkA_N PF02254.18 gi|21226252|ref|NP_632174.1| - 0.0087 16.3 0.1 0.078 13.2 0.0 2.3 2 2 0 2 2 2 1 TrkA-N domain DapB_N PF01113.20 gi|21226252|ref|NP_632174.1| - 0.013 15.6 0.0 0.024 14.8 0.0 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus RmlD_sub_bind PF04321.17 gi|21226252|ref|NP_632174.1| - 0.02 14.0 0.0 1.9 7.5 0.0 2.3 2 0 0 2 2 2 0 RmlD substrate binding domain adh_short_C2 PF13561.6 gi|21226252|ref|NP_632174.1| - 0.022 14.3 0.0 0.056 13.0 0.0 1.7 2 0 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase DUF3798 PF12683.7 gi|21226252|ref|NP_632174.1| - 0.062 12.7 0.0 0.094 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3798) KR PF08659.10 gi|21226252|ref|NP_632174.1| - 0.2 11.6 0.1 0.42 10.5 0.0 1.6 2 0 0 2 2 2 0 KR domain D5_N PF08706.11 gi|21226253|ref|NP_632175.1| - 4.1e-07 30.4 0.0 1.5e-06 28.6 0.0 2.1 1 0 0 1 1 1 1 D5 N terminal like Pox_D5 PF03288.16 gi|21226253|ref|NP_632175.1| - 0.0045 17.5 0.7 0.012 16.1 0.1 2.0 2 0 0 2 2 2 1 Poxvirus D5 protein-like RFX_DNA_binding PF02257.15 gi|21226253|ref|NP_632175.1| - 0.072 13.7 0.1 3 8.5 0.0 2.5 2 0 0 2 2 2 0 RFX DNA-binding domain PGM_PMM_III PF02880.16 gi|21226253|ref|NP_632175.1| - 0.12 12.6 0.0 0.26 11.5 0.0 1.5 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Phage_integrase PF00589.22 gi|21226254|ref|NP_632176.1| - 1.7e-17 63.7 0.0 3.1e-17 62.9 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|21226254|ref|NP_632176.1| - 1.8e-08 34.7 1.4 3.6e-08 33.8 0.2 1.9 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|21226254|ref|NP_632176.1| - 3.4e-05 24.1 0.0 9.2e-05 22.7 0.0 1.7 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain DZR PF12773.7 gi|21226254|ref|NP_632176.1| - 0.0006 19.8 0.2 0.0011 19.0 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon Cript PF10235.9 gi|21226254|ref|NP_632176.1| - 0.052 14.1 0.2 0.14 12.7 0.2 1.7 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT Phage_int_SAM_5 PF13102.6 gi|21226254|ref|NP_632176.1| - 0.096 13.0 3.6 0.15 12.4 1.4 2.2 2 0 0 2 2 2 0 Phage integrase SAM-like domain zinc_ribbon_2 PF13240.6 gi|21226254|ref|NP_632176.1| - 0.16 11.7 4.6 0.31 10.8 4.6 1.4 1 0 0 1 1 1 0 zinc-ribbon domain DUF1788 PF08747.11 gi|21226255|ref|NP_632177.1| - 1.3e-40 138.2 0.1 1.9e-40 137.7 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1788) KAP_NTPase PF07693.14 gi|21226256|ref|NP_632178.1| - 0.0064 15.8 0.0 0.022 14.0 0.0 2.0 1 1 0 1 1 1 1 KAP family P-loop domain NACHT PF05729.12 gi|21226256|ref|NP_632178.1| - 0.094 12.6 0.0 0.28 11.1 0.0 1.8 1 0 0 1 1 1 0 NACHT domain SMC_N PF02463.19 gi|21226256|ref|NP_632178.1| - 0.2 11.1 7.9 0.013 15.0 0.8 2.8 3 1 0 3 3 3 0 RecF/RecN/SMC N terminal domain TPR_12 PF13424.6 gi|21226257|ref|NP_632179.1| - 5.8e-22 77.8 34.0 0.0025 18.0 1.3 10.4 6 3 2 8 8 8 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21226257|ref|NP_632179.1| - 6.3e-21 72.8 41.5 0.0009 19.3 0.5 11.5 11 0 0 11 11 11 6 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21226257|ref|NP_632179.1| - 3.5e-19 67.7 35.7 0.007 16.1 0.0 10.6 11 1 1 12 12 12 7 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21226257|ref|NP_632179.1| - 2.9e-16 58.2 19.2 0.061 13.4 0.1 10.2 11 0 0 11 11 11 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21226257|ref|NP_632179.1| - 7.2e-16 57.5 5.2 0.025 14.4 0.0 7.9 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21226257|ref|NP_632179.1| - 6.4e-14 50.9 38.3 0.028 14.5 0.6 11.3 11 2 1 12 12 12 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21226257|ref|NP_632179.1| - 2.1e-12 46.7 10.5 1.3 10.1 0.1 10.1 11 1 0 11 11 9 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21226257|ref|NP_632179.1| - 1.5e-08 34.7 24.2 7.4 7.4 0.7 11.3 10 2 0 10 10 10 1 Tetratricopeptide repeat MIT PF04212.18 gi|21226257|ref|NP_632179.1| - 4.6e-06 26.6 20.5 0.0096 16.0 1.1 7.0 7 1 0 7 7 6 2 MIT (microtubule interacting and transport) domain TPR_19 PF14559.6 gi|21226257|ref|NP_632179.1| - 1.7e-05 25.2 21.7 0.25 11.9 0.0 8.2 6 2 1 8 8 8 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|21226257|ref|NP_632179.1| - 4.4e-05 23.0 5.3 0.03 13.7 0.0 4.6 3 2 0 4 4 4 1 MalT-like TPR region DUF2225 PF09986.9 gi|21226257|ref|NP_632179.1| - 0.00057 19.7 16.5 0.12 12.1 0.4 5.0 2 1 2 4 4 4 2 Uncharacterized protein conserved in bacteria (DUF2225) TPR_17 PF13431.6 gi|21226257|ref|NP_632179.1| - 0.017 15.4 11.4 15 6.2 0.1 8.5 10 0 0 10 10 10 0 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21226257|ref|NP_632179.1| - 0.052 14.2 8.8 40 5.0 1.0 6.5 5 2 1 6 6 5 0 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226257|ref|NP_632179.1| - 0.068 12.9 0.2 0.068 12.9 0.2 7.1 8 1 0 8 8 7 0 TPR repeat IPK PF03770.16 gi|21226257|ref|NP_632179.1| - 0.089 12.6 0.8 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 Inositol polyphosphate kinase TPR_21 PF09976.9 gi|21226257|ref|NP_632179.1| - 1.1 9.0 14.9 1.4 8.6 0.3 4.3 4 1 0 4 4 4 0 Tetratricopeptide repeat-like domain DUF4810 PF16068.5 gi|21226257|ref|NP_632179.1| - 3.5 8.2 13.3 27 5.4 0.2 5.6 6 1 1 7 7 7 0 Domain of unknown function (DUF4810) N6_Mtase PF02384.16 gi|21226258|ref|NP_632180.1| - 6.7e-11 42.0 0.0 2e-05 24.0 0.0 2.4 2 0 0 2 2 2 2 N-6 DNA Methylase Eco57I PF07669.11 gi|21226258|ref|NP_632180.1| - 3e-07 30.9 0.0 3e-07 30.9 0.0 2.7 4 0 0 4 4 4 1 Eco57I restriction-modification methylase DUF724 PF05266.14 gi|21226258|ref|NP_632180.1| - 1.4 8.7 7.6 0.084 12.7 1.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF724) HATPase_c_4 PF13749.6 gi|21226259|ref|NP_632181.1| - 1.4e-25 89.2 0.0 2.3e-25 88.5 0.0 1.3 1 0 0 1 1 1 1 Putative ATP-dependent DNA helicase recG C-terminal HTH_45 PF14947.6 gi|21226259|ref|NP_632181.1| - 0.0047 16.9 0.0 0.01 15.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.6 gi|21226259|ref|NP_632181.1| - 0.0065 16.6 0.1 0.012 15.8 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4423 PF14394.6 gi|21226259|ref|NP_632181.1| - 0.017 14.8 0.1 0.025 14.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) PadR PF03551.14 gi|21226259|ref|NP_632181.1| - 0.034 14.1 0.0 0.076 13.0 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_27 PF13463.6 gi|21226259|ref|NP_632181.1| - 0.11 13.1 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|21226260|ref|NP_632182.1| - 0.00046 20.1 0.0 0.00097 19.1 0.0 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix PadR PF03551.14 gi|21226260|ref|NP_632182.1| - 0.013 15.4 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family BsuBI_PstI_RE_N PF17728.1 gi|21226260|ref|NP_632182.1| - 0.065 13.1 0.0 0.085 12.7 0.0 1.2 1 0 0 1 1 1 0 BsuBI/PstI restriction endonuclease HTH domain DUF2513 PF10711.9 gi|21226260|ref|NP_632182.1| - 0.11 12.8 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) HicA_toxin PF07927.12 gi|21226262|ref|NP_632184.1| - 3e-18 65.6 0.1 4.1e-18 65.2 0.1 1.2 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, BRX_N PF13713.6 gi|21226262|ref|NP_632184.1| - 0.082 12.7 0.4 0.25 11.1 0.0 2.0 2 0 0 2 2 2 0 Transcription factor BRX N-terminal domain CBM_19 PF03427.13 gi|21226263|ref|NP_632185.1| - 0.098 12.7 0.1 0.098 12.7 0.1 1.1 1 0 0 1 1 1 0 Carbohydrate binding domain (family 19) ATPase_2 PF01637.18 gi|21226264|ref|NP_632186.1| - 2.1e-19 70.4 4.5 1.2e-18 67.8 0.9 2.9 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea DUF234 PF03008.14 gi|21226264|ref|NP_632186.1| - 5.9e-19 68.4 0.3 5e-18 65.4 0.2 2.4 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.6 gi|21226264|ref|NP_632186.1| - 4.4e-12 46.2 0.4 1.1e-11 44.8 0.2 1.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|21226264|ref|NP_632186.1| - 3.4e-05 24.3 0.2 0.0024 18.2 0.2 2.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|21226264|ref|NP_632186.1| - 4.3e-05 23.8 0.0 0.00011 22.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|21226264|ref|NP_632186.1| - 0.0015 18.7 0.0 0.0037 17.4 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) HTH_5 PF01022.20 gi|21226264|ref|NP_632186.1| - 0.012 15.5 0.1 0.03 14.2 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TniB PF05621.11 gi|21226264|ref|NP_632186.1| - 0.054 12.9 0.0 0.13 11.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial TniB protein HTH_24 PF13412.6 gi|21226264|ref|NP_632186.1| - 0.081 12.5 0.1 0.38 10.4 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding PglZ PF08665.12 gi|21226265|ref|NP_632187.1| - 4e-60 202.9 0.2 1.1e-59 201.5 0.2 1.8 1 0 0 1 1 1 1 PglZ domain Phosphodiest PF01663.22 gi|21226265|ref|NP_632187.1| - 0.03 13.9 0.9 0.088 12.4 0.0 2.1 2 1 0 2 2 2 0 Type I phosphodiesterase / nucleotide pyrophosphatase YafO_toxin PF13957.6 gi|21226265|ref|NP_632187.1| - 0.048 13.7 0.7 0.23 11.5 0.1 2.4 2 0 0 2 2 2 0 Toxin YafO, type II toxin-antitoxin system Lon_2 PF13337.6 gi|21226266|ref|NP_632188.1| - 1.9e-205 682.7 0.5 2.2e-205 682.5 0.5 1.0 1 0 0 1 1 1 1 Putative ATP-dependent Lon protease Lon_C PF05362.13 gi|21226266|ref|NP_632188.1| - 6.8e-07 29.0 0.0 1.4e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain ATP-synt_DE PF00401.20 gi|21226267|ref|NP_632189.1| - 0.034 14.4 0.1 3.4 8.0 0.0 2.3 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Sacchrp_dh_NADP PF03435.18 gi|21226268|ref|NP_632190.1| - 1.5e-25 89.9 0.0 4.2e-25 88.5 0.0 1.8 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Sacchrp_dh_C PF16653.5 gi|21226268|ref|NP_632190.1| - 7.7e-24 85.2 0.0 1.3e-23 84.4 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain Cation_efflux PF01545.21 gi|21226269|ref|NP_632191.1| - 2.8e-38 131.7 11.3 3.5e-38 131.3 11.3 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|21226269|ref|NP_632191.1| - 6.5e-18 64.6 0.2 6.5e-18 64.6 0.2 1.8 2 0 0 2 2 2 1 Dimerisation domain of Zinc Transporter Cation_ATPase_C PF00689.21 gi|21226269|ref|NP_632191.1| - 3.4 7.4 6.2 1.2 8.8 2.3 2.0 1 1 1 2 2 2 0 Cation transporting ATPase, C-terminus PAS_4 PF08448.10 gi|21226270|ref|NP_632192.1| - 1.9e-82 272.7 0.0 1.4e-20 73.6 0.0 8.7 8 0 0 8 8 8 6 PAS fold PAS_9 PF13426.7 gi|21226270|ref|NP_632192.1| - 2.7e-79 262.1 5.2 2.4e-16 59.9 0.0 8.9 9 1 0 9 9 9 7 PAS domain PAS PF00989.25 gi|21226270|ref|NP_632192.1| - 1.7e-75 250.3 0.3 1.3e-16 60.6 0.0 8.9 9 0 0 9 9 9 7 PAS fold PAS_3 PF08447.12 gi|21226270|ref|NP_632192.1| - 1.1e-50 169.8 0.4 4e-16 59.1 0.0 7.9 8 0 0 8 8 7 6 PAS fold GAF_2 PF13185.6 gi|21226270|ref|NP_632192.1| - 2.2e-40 138.2 0.0 4.2e-20 72.5 0.0 3.5 4 0 0 4 4 3 2 GAF domain PAS_8 PF13188.7 gi|21226270|ref|NP_632192.1| - 4.9e-38 128.5 0.0 3.6e-09 36.4 0.0 7.6 7 0 0 7 7 7 6 PAS domain HisKA_2 PF07568.12 gi|21226270|ref|NP_632192.1| - 1e-32 112.1 0.3 5.3e-32 109.7 0.3 2.4 1 0 0 1 1 1 1 Histidine kinase PAS_7 PF12860.7 gi|21226270|ref|NP_632192.1| - 1.4e-15 57.4 8.1 0.032 14.4 0.0 9.3 9 2 0 9 9 9 4 PAS fold PAS_10 PF13596.6 gi|21226270|ref|NP_632192.1| - 1.4e-12 48.1 0.0 2.5e-06 28.0 0.0 5.4 6 0 0 6 6 4 2 PAS domain HATPase_c PF02518.26 gi|21226270|ref|NP_632192.1| - 2.2e-09 37.8 0.1 1.1e-08 35.5 0.1 2.3 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|21226270|ref|NP_632192.1| - 1.2e-05 25.2 0.0 3.3e-05 23.8 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain GAF_3 PF13492.6 gi|21226270|ref|NP_632192.1| - 3.8e-05 24.0 0.0 1.2 9.5 0.0 4.3 4 1 0 4 4 4 2 GAF domain GAF PF01590.26 gi|21226270|ref|NP_632192.1| - 0.00014 22.5 0.0 0.14 12.8 0.0 3.3 3 0 0 3 3 3 1 GAF domain HWE_HK PF07536.14 gi|21226270|ref|NP_632192.1| - 0.00057 20.5 0.0 0.0028 18.3 0.1 2.3 2 0 0 2 2 1 1 HWE histidine kinase MEKHLA PF08670.11 gi|21226270|ref|NP_632192.1| - 0.019 14.9 0.0 0.47 10.3 0.0 2.9 3 0 0 3 3 3 0 MEKHLA domain DUF3932 PF13068.6 gi|21226270|ref|NP_632192.1| - 0.12 12.7 0.0 0.54 10.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3932) PAS_3 PF08447.12 gi|21226271|ref|NP_632193.1| - 2.1e-44 149.7 0.6 2.9e-15 56.3 0.1 5.1 4 1 0 4 4 4 4 PAS fold HisKA_2 PF07568.12 gi|21226271|ref|NP_632193.1| - 1.3e-33 114.9 6.6 1.4e-33 114.8 0.9 3.4 3 0 0 3 3 3 1 Histidine kinase PAS_4 PF08448.10 gi|21226271|ref|NP_632193.1| - 4.7e-27 94.4 0.3 1.9e-10 40.9 0.0 5.1 4 1 0 4 4 4 3 PAS fold PAS PF00989.25 gi|21226271|ref|NP_632193.1| - 6.8e-18 64.7 0.1 0.0029 17.6 0.0 5.7 5 1 0 5 5 5 4 PAS fold PAS_9 PF13426.7 gi|21226271|ref|NP_632193.1| - 1.2e-16 60.8 0.0 2.7e-07 30.8 0.0 5.6 5 1 0 5 5 5 3 PAS domain PAS_7 PF12860.7 gi|21226271|ref|NP_632193.1| - 3.9e-08 33.5 0.2 7.8e-06 26.0 0.0 3.8 3 1 0 3 3 3 1 PAS fold HATPase_c PF02518.26 gi|21226271|ref|NP_632193.1| - 1.1e-06 29.1 0.1 4.3e-06 27.2 0.1 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|21226271|ref|NP_632193.1| - 0.00011 22.8 1.0 0.00082 20.0 0.2 2.7 2 0 0 2 2 2 1 HWE histidine kinase PAS_8 PF13188.7 gi|21226271|ref|NP_632193.1| - 0.0059 16.6 0.1 0.048 13.7 0.0 2.6 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.6 gi|21226271|ref|NP_632193.1| - 0.0084 16.1 0.0 0.023 14.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain NAT PF04768.13 gi|21226271|ref|NP_632193.1| - 0.0096 15.6 0.0 0.05 13.3 0.0 2.2 2 0 0 2 2 2 1 NAT, N-acetyltransferase, of N-acetylglutamate synthase SPOB_a PF14689.6 gi|21226271|ref|NP_632193.1| - 0.08 12.7 0.0 0.38 10.5 0.0 2.2 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain PAS_10 PF13596.6 gi|21226271|ref|NP_632193.1| - 0.082 13.5 0.5 24 5.6 0.0 4.2 4 1 0 4 4 4 0 PAS domain BLYB PF05289.11 gi|21226271|ref|NP_632193.1| - 0.8 9.9 7.7 0.09 13.0 3.0 1.8 2 0 0 2 2 2 0 Borrelia hemolysin accessory protein ATP-synt_DE PF00401.20 gi|21226271|ref|NP_632193.1| - 0.85 9.9 9.5 9.3 6.6 0.7 3.5 3 0 0 3 3 3 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DDE_3 PF13358.6 gi|21226272|ref|NP_632194.1| - 3.7e-28 98.1 0.3 4.8e-28 97.8 0.3 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF287 PF03384.14 gi|21226272|ref|NP_632194.1| - 0.045 14.2 1.9 0.066 13.6 0.5 2.1 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 HTH_32 PF13565.6 gi|21226273|ref|NP_632195.1| - 3.6e-12 46.7 0.2 2.2e-11 44.2 0.0 1.9 1 1 1 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.6 gi|21226273|ref|NP_632195.1| - 7.6e-10 38.3 0.1 1.9e-09 37.0 0.1 1.7 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 gi|21226273|ref|NP_632195.1| - 4.9e-08 32.9 0.0 1e-07 31.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.6 gi|21226273|ref|NP_632195.1| - 3.2e-07 30.4 0.0 7.2e-07 29.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 gi|21226273|ref|NP_632195.1| - 0.00015 21.8 0.4 0.00093 19.2 0.5 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_5 PF01022.20 gi|21226273|ref|NP_632195.1| - 0.0053 16.6 0.2 0.01 15.7 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|21226273|ref|NP_632195.1| - 0.022 14.7 0.0 0.78 9.7 0.0 2.3 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|21226273|ref|NP_632195.1| - 0.041 13.4 0.5 0.089 12.4 0.3 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding PocR PF10114.9 gi|21226274|ref|NP_632196.1| - 3.1e-49 166.9 0.0 5.1e-49 166.2 0.0 1.4 1 0 0 1 1 1 1 Sensory domain found in PocR PAS_9 PF13426.7 gi|21226274|ref|NP_632196.1| - 4.4e-22 78.3 0.0 3.6e-16 59.3 0.0 3.1 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|21226274|ref|NP_632196.1| - 3.4e-21 75.5 0.0 7.7e-12 45.4 0.0 2.7 3 0 0 3 3 3 2 PAS fold PAS PF00989.25 gi|21226274|ref|NP_632196.1| - 1.9e-20 73.0 0.0 1.1e-13 51.1 0.0 3.6 3 0 0 3 3 3 2 PAS fold PAS_3 PF08447.12 gi|21226274|ref|NP_632196.1| - 1.8e-09 37.7 0.0 4.7e-06 26.8 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.7 gi|21226274|ref|NP_632196.1| - 3.4e-08 33.3 0.0 8.4e-07 28.9 0.0 3.1 4 0 0 4 4 4 1 PAS domain CbiZ PF01955.18 gi|21226275|ref|NP_632197.1| - 3e-37 128.6 0.1 3.7e-37 128.3 0.1 1.1 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase B12-binding PF02310.19 gi|21226276|ref|NP_632198.1| - 1.4e-19 70.3 0.5 2.7e-19 69.4 0.5 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|21226276|ref|NP_632198.1| - 2.1e-15 56.9 0.4 9.9e-15 54.7 0.1 2.1 2 1 0 2 2 2 1 B12 binding domain UPF0180 PF03698.13 gi|21226276|ref|NP_632198.1| - 0.008 16.3 0.0 0.23 11.7 0.0 2.8 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0180) Mut7-C PF01927.16 gi|21226276|ref|NP_632198.1| - 0.11 12.7 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 Mut7-C RNAse domain MtaB PF12176.8 gi|21226277|ref|NP_632199.1| - 3.3e-230 764.6 7.4 3.7e-230 764.5 7.4 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit URO-D PF01208.17 gi|21226278|ref|NP_632200.1| - 1.7e-84 283.9 0.0 1.9e-84 283.8 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Macro PF01661.21 gi|21226279|ref|NP_632201.1| - 1.7e-45 153.9 0.0 2.4e-45 153.4 0.0 1.2 1 0 0 1 1 1 1 Macro domain TPR_2 PF07719.17 gi|21226280|ref|NP_632202.1| - 2.3e-245 773.6 145.1 9.6e-07 28.5 0.1 47.9 48 0 0 48 48 48 43 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21226280|ref|NP_632202.1| - 6.7e-240 766.4 123.1 3.7e-08 32.9 0.1 47.6 48 0 0 48 48 48 41 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21226280|ref|NP_632202.1| - 5.1e-184 596.7 61.1 5.8e-10 39.7 0.1 28.1 17 5 15 33 33 32 29 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21226280|ref|NP_632202.1| - 6.5e-161 509.5 115.0 4.6e-05 23.3 0.2 45.9 48 0 0 48 48 47 32 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21226280|ref|NP_632202.1| - 9.3e-146 474.6 92.6 1.2e-08 35.3 0.8 27.0 20 5 6 28 28 28 23 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226280|ref|NP_632202.1| - 4.3e-140 455.2 92.6 4.8e-07 29.3 0.6 42.9 12 8 34 46 46 46 34 TPR repeat TPR_14 PF13428.6 gi|21226280|ref|NP_632202.1| - 1.8e-120 383.2 118.2 0.00037 21.1 0.0 46.4 10 8 38 48 48 48 30 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21226280|ref|NP_632202.1| - 1.2e-115 377.8 55.2 3.7e-09 36.6 1.2 28.8 12 8 16 30 30 29 24 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21226280|ref|NP_632202.1| - 7.2e-113 362.1 96.3 0.00055 20.4 0.1 45.6 48 0 0 48 48 44 19 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21226280|ref|NP_632202.1| - 3.2e-108 354.2 100.0 9.8e-07 29.0 0.0 30.6 17 9 10 29 29 29 24 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21226280|ref|NP_632202.1| - 6e-103 337.2 89.3 2e-08 34.3 0.0 23.0 6 6 20 29 29 29 27 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 gi|21226280|ref|NP_632202.1| - 2.3e-98 315.7 58.5 0.0017 18.6 0.0 38.7 38 2 2 40 40 37 17 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|21226280|ref|NP_632202.1| - 2.1e-67 223.0 80.5 3.5e-05 23.8 0.0 35.0 17 12 20 37 37 37 13 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 gi|21226280|ref|NP_632202.1| - 8.1e-55 178.9 80.2 0.00078 19.3 0.1 37.7 39 5 4 43 43 38 7 Tetratricopeptide repeat NARP1 PF12569.8 gi|21226280|ref|NP_632202.1| - 7.7e-45 153.8 70.0 0.00025 20.1 1.5 18.5 5 5 11 18 18 18 15 NMDA receptor-regulated protein 1 SRP_TPR_like PF17004.5 gi|21226280|ref|NP_632202.1| - 9.6e-42 141.7 59.4 8.5e-05 22.6 0.3 19.1 5 4 12 18 18 18 11 Putative TPR-like repeat TPR_10 PF13374.6 gi|21226280|ref|NP_632202.1| - 7e-31 105.2 88.0 0.75 9.8 0.0 33.0 37 0 0 37 37 35 5 Tetratricopeptide repeat BTAD PF03704.17 gi|21226280|ref|NP_632202.1| - 3.7e-28 98.8 73.2 0.077 13.4 0.0 19.4 8 5 10 19 19 19 9 Bacterial transcriptional activator domain TPR_15 PF13429.6 gi|21226280|ref|NP_632202.1| - 6.3e-28 97.8 54.6 0.015 14.5 0.6 16.6 7 3 8 16 16 16 11 Tetratricopeptide repeat TPR_20 PF14561.6 gi|21226280|ref|NP_632202.1| - 1.4e-26 92.6 59.9 0.03 14.7 0.0 22.8 10 5 15 28 28 28 4 Tetratricopeptide repeat YfiO PF13525.6 gi|21226280|ref|NP_632202.1| - 3.8e-22 79.0 29.5 2.8e-05 23.9 0.6 12.9 7 5 6 13 13 13 5 Outer membrane lipoprotein Coatomer_E PF04733.14 gi|21226280|ref|NP_632202.1| - 7.6e-21 74.8 46.9 0.0062 16.0 0.2 16.4 6 4 10 19 19 19 8 Coatomer epsilon subunit TPR_4 PF07721.14 gi|21226280|ref|NP_632202.1| - 2.9e-18 64.6 25.9 13 6.7 0.5 20.1 25 0 0 25 25 15 0 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 gi|21226280|ref|NP_632202.1| - 4.6e-17 61.8 16.5 0.67 9.6 0.4 15.2 9 5 8 18 18 17 3 Bacterial type III secretion protein (HrpB1_HrpK) PknG_TPR PF16918.5 gi|21226280|ref|NP_632202.1| - 1.1e-15 57.3 31.4 0.0011 17.7 0.1 15.7 8 5 5 17 17 17 2 Protein kinase G tetratricopeptide repeat DUF3856 PF12968.7 gi|21226280|ref|NP_632202.1| - 1.8e-13 50.8 49.1 0.26 11.4 0.1 22.2 10 7 10 21 21 21 2 Domain of Unknown Function (DUF3856) Paf67 PF10255.9 gi|21226280|ref|NP_632202.1| - 1.9e-11 43.6 0.0 3.2 6.7 0.0 12.8 9 4 5 17 17 16 1 RNA polymerase I-associated factor PAF67 RPN7 PF10602.9 gi|21226280|ref|NP_632202.1| - 7.4e-08 32.3 38.5 0.5 10.0 0.4 16.2 9 7 4 14 14 14 2 26S proteasome subunit RPN7 Rapsyn_N PF10579.9 gi|21226280|ref|NP_632202.1| - 4.8e-07 29.8 1.3 81 3.4 0.0 11.6 14 3 3 17 17 11 0 Rapsyn N-terminal myristoylation and linker region PriCT_2 PF08707.11 gi|21226280|ref|NP_632202.1| - 5.1e-06 26.8 1.7 2.7 8.4 0.0 6.4 5 1 1 6 6 5 1 Primase C terminal 2 (PriCT-2) Alkyl_sulf_dimr PF14863.6 gi|21226280|ref|NP_632202.1| - 9.5e-06 26.1 22.2 1 9.8 0.1 10.9 10 4 3 13 13 11 1 Alkyl sulfatase dimerisation TPR_21 PF09976.9 gi|21226280|ref|NP_632202.1| - 2.7e-05 23.9 51.3 0.8 9.4 0.5 14.5 7 5 8 17 17 16 3 Tetratricopeptide repeat-like domain DUF5112 PF17139.4 gi|21226280|ref|NP_632202.1| - 5.3e-05 22.8 3.0 1.3 8.4 0.1 5.1 4 0 0 4 4 4 2 Domain of unknown function (DUF5112) TPR_18 PF13512.6 gi|21226280|ref|NP_632202.1| - 0.0001 22.5 16.7 1.7 8.7 0.2 10.3 9 3 3 12 12 10 1 Tetratricopeptide repeat ChAPs PF09295.10 gi|21226280|ref|NP_632202.1| - 0.0001 21.5 9.3 0.69 8.8 0.0 6.8 6 1 1 8 8 8 1 ChAPs (Chs5p-Arf1p-binding proteins) DUF627 PF04781.12 gi|21226280|ref|NP_632202.1| - 0.0002 21.4 16.3 0.51 10.4 0.0 10.3 15 2 2 17 17 8 1 Protein of unknown function (DUF627) PPR PF01535.20 gi|21226280|ref|NP_632202.1| - 0.00035 20.6 72.8 12 6.4 0.0 24.6 28 0 0 28 28 23 0 PPR repeat DUF4919 PF16266.5 gi|21226280|ref|NP_632202.1| - 0.00037 20.5 13.2 21 5.0 0.0 8.6 9 2 0 10 10 7 0 Domain of unknown function (DUF4919) PPTA PF01239.22 gi|21226280|ref|NP_632202.1| - 0.00087 18.9 9.3 1.5 8.7 0.0 7.3 8 0 0 8 8 6 1 Protein prenyltransferase alpha subunit repeat PSDC PF12588.8 gi|21226280|ref|NP_632202.1| - 0.0017 18.4 0.1 28 4.7 0.0 6.2 6 1 1 7 7 5 0 Phophatidylserine decarboxylase Foie-gras_1 PF11817.8 gi|21226280|ref|NP_632202.1| - 0.0022 17.7 4.7 0.015 14.9 0.2 4.4 2 1 2 4 4 4 1 Foie gras liver health family 1 TPR_3 PF07720.12 gi|21226280|ref|NP_632202.1| - 0.0029 17.5 60.6 5.8 7.0 0.0 19.9 25 0 0 25 25 19 0 Tetratricopeptide repeat DDT PF02791.17 gi|21226280|ref|NP_632202.1| - 0.012 15.9 2.2 32 4.9 0.0 6.9 8 0 0 8 8 4 0 DDT domain TPR_5 PF12688.7 gi|21226280|ref|NP_632202.1| - 0.013 15.7 30.2 12 6.2 0.0 11.8 12 3 2 14 14 11 0 Tetratrico peptide repeat Vps39_1 PF10366.9 gi|21226280|ref|NP_632202.1| - 0.084 13.2 2.1 5.5 7.3 0.1 4.0 3 0 0 3 3 3 0 Vacuolar sorting protein 39 domain 1 TcdB_N PF12918.7 gi|21226280|ref|NP_632202.1| - 0.1 12.9 1.7 29 5.0 0.1 4.1 3 0 0 3 3 3 0 TcdB toxin N-terminal helical domain TOM20_plant PF06552.12 gi|21226280|ref|NP_632202.1| - 0.12 12.2 28.8 3.7 7.3 0.2 11.7 13 3 0 13 13 11 0 Plant specific mitochondrial import receptor subunit TOM20 HTH_Bact PF18768.1 gi|21226280|ref|NP_632202.1| - 0.13 11.9 0.5 77 3.0 0.0 6.1 8 0 0 8 8 2 0 Helix-turn-helix bacterial domain ANAPC5 PF12862.7 gi|21226280|ref|NP_632202.1| - 0.16 12.1 28.1 72 3.5 0.0 14.2 12 4 1 13 13 12 0 Anaphase-promoting complex subunit 5 CCP_MauG PF03150.14 gi|21226280|ref|NP_632202.1| - 0.19 12.4 10.5 62 4.2 0.0 7.3 8 2 2 10 10 7 0 Di-haem cytochrome c peroxidase DUF5113 PF17140.4 gi|21226280|ref|NP_632202.1| - 0.3 10.9 23.0 19 5.0 0.1 10.9 14 2 2 16 16 11 0 Domain of unknown function (DUF5113) SPOB_a PF14689.6 gi|21226280|ref|NP_632202.1| - 2.1 8.1 11.3 60 3.5 0.0 8.6 11 1 1 12 12 7 0 Sensor_kinase_SpoOB-type, alpha-helical domain DUF3303 PF11746.8 gi|21226281|ref|NP_632203.1| - 0.00026 21.2 0.0 0.00043 20.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) GYD PF08734.11 gi|21226281|ref|NP_632203.1| - 0.053 13.5 0.3 0.11 12.4 0.0 1.7 2 0 0 2 2 2 0 GYD domain Acetyltransf_1 PF00583.25 gi|21226282|ref|NP_632204.1| - 3.7e-18 65.8 0.1 4.9e-18 65.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21226282|ref|NP_632204.1| - 3.9e-10 40.0 0.0 6.1e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21226282|ref|NP_632204.1| - 2.9e-09 36.9 0.0 4.2e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21226282|ref|NP_632204.1| - 0.00018 21.6 0.0 0.00031 20.8 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 gi|21226282|ref|NP_632204.1| - 0.019 15.1 0.0 0.026 14.7 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|21226282|ref|NP_632204.1| - 0.023 14.9 0.0 0.03 14.5 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21226282|ref|NP_632204.1| - 0.034 14.1 0.0 0.15 12.0 0.0 1.9 2 0 0 2 2 2 0 FR47-like protein Acetyltransf_15 PF17013.5 gi|21226282|ref|NP_632204.1| - 0.046 13.2 0.0 0.073 12.5 0.0 1.4 1 1 0 1 1 1 0 Putative acetyl-transferase DUF2156 PF09924.9 gi|21226283|ref|NP_632205.1| - 2.1e-56 191.1 0.0 2.4e-56 190.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2156) ThiC_Rad_SAM PF01964.18 gi|161485683|ref|NP_632206.2| - 4.8e-185 615.3 0.1 5.4e-185 615.1 0.1 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family TFX_C PF14601.6 gi|161485683|ref|NP_632206.2| - 0.067 13.2 0.1 1.4 8.9 0.1 2.5 1 1 0 1 1 1 0 DNA_binding protein, TFX, C-term Adhesin_Dr PF04619.12 gi|161485683|ref|NP_632206.2| - 0.073 13.0 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Dr-family adhesin Topoisom_bac PF01131.20 gi|21226285|ref|NP_632207.1| - 8.6e-109 364.3 0.0 1.1e-108 363.9 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|21226285|ref|NP_632207.1| - 7.1e-16 58.3 0.3 1.4e-14 54.1 0.0 2.8 3 0 0 3 3 3 1 Toprim domain zf-C4_Topoisom PF01396.19 gi|21226285|ref|NP_632207.1| - 6.6e-14 51.4 10.8 8.2e-09 35.1 0.4 3.6 3 0 0 3 3 3 2 Topoisomerase DNA binding C4 zinc finger OEP PF02321.18 gi|21226285|ref|NP_632207.1| - 0.0086 15.9 0.0 0.019 14.8 0.0 1.5 1 0 0 1 1 1 1 Outer membrane efflux protein Auto_anti-p27 PF06677.12 gi|21226285|ref|NP_632207.1| - 0.065 13.4 0.1 0.065 13.4 0.1 2.6 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Toprim_2 PF13155.6 gi|21226285|ref|NP_632207.1| - 0.11 13.0 0.1 0.37 11.3 0.1 1.9 1 1 0 1 1 1 0 Toprim-like ABC_tran_CTD PF16326.5 gi|21226285|ref|NP_632207.1| - 0.42 10.9 2.0 1.7 8.9 2.0 2.1 1 0 0 1 1 1 0 ABC transporter C-terminal domain DUF1451 PF07295.11 gi|21226285|ref|NP_632207.1| - 1.3 9.1 8.9 0.22 11.5 0.6 3.1 3 0 0 3 3 3 0 Zinc-ribbon containing domain Ribosomal_S3Ae PF01015.18 gi|21226286|ref|NP_632208.1| - 4.4e-64 215.8 3.7 5.1e-64 215.6 3.7 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family adh_short_C2 PF13561.6 gi|21226287|ref|NP_632209.1| - 6.7e-65 218.9 1.0 7.7e-65 218.7 1.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|21226287|ref|NP_632209.1| - 2.3e-57 193.7 1.7 2.8e-57 193.4 1.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|21226287|ref|NP_632209.1| - 4e-15 56.2 0.3 5.5e-15 55.7 0.3 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 gi|21226287|ref|NP_632209.1| - 1.2e-05 24.6 0.2 1.6e-05 24.2 0.2 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.21 gi|21226287|ref|NP_632209.1| - 2.4e-05 23.9 0.1 3.2e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|21226287|ref|NP_632209.1| - 0.00015 21.7 0.1 0.0002 21.3 0.1 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Glyco_trans_4_2 PF13477.6 gi|21226287|ref|NP_632209.1| - 0.0099 15.9 0.0 0.027 14.5 0.0 1.8 1 1 1 2 2 2 1 Glycosyl transferase 4-like Pyr_redox PF00070.27 gi|21226287|ref|NP_632209.1| - 0.013 16.1 0.1 0.013 16.1 0.1 2.3 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase DFP PF04127.15 gi|21226287|ref|NP_632209.1| - 0.014 15.2 0.1 0.029 14.2 0.1 1.5 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein 3Beta_HSD PF01073.19 gi|21226287|ref|NP_632209.1| - 0.033 13.2 0.2 0.043 12.8 0.2 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family 3HCDH_N PF02737.18 gi|21226287|ref|NP_632209.1| - 0.043 13.7 0.7 0.072 13.0 0.2 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LpxI_N PF17930.1 gi|21226287|ref|NP_632209.1| - 0.054 13.4 0.3 0.2 11.5 0.2 2.0 2 0 0 2 2 2 0 LpxI N-terminal domain Pyr_redox_2 PF07992.14 gi|21226287|ref|NP_632209.1| - 0.064 12.5 1.1 0.091 12.0 0.5 1.5 1 1 1 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase RmlD_sub_bind PF04321.17 gi|21226287|ref|NP_632209.1| - 0.078 12.1 0.1 0.12 11.5 0.1 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Glyco_transf_5 PF08323.11 gi|21226287|ref|NP_632209.1| - 0.16 11.6 0.0 3.1 7.4 0.0 2.1 2 0 0 2 2 2 0 Starch synthase catalytic domain MAM1 PF10434.9 gi|21226287|ref|NP_632209.1| - 0.21 11.2 0.2 0.31 10.6 0.2 1.1 1 0 0 1 1 1 0 Monopolin complex protein MAM1 GYD PF08734.11 gi|21226288|ref|NP_632210.1| - 1.4e-22 79.4 0.0 1.8e-22 79.0 0.0 1.1 1 0 0 1 1 1 1 GYD domain NTP_transf_2 PF01909.23 gi|21226289|ref|NP_632211.1| - 1.9e-13 50.5 0.4 2.2e-13 50.3 0.4 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|21226289|ref|NP_632211.1| - 1.5e-10 41.0 0.0 2.1e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|21226289|ref|NP_632211.1| - 0.0021 18.2 0.0 0.0022 18.2 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm Ribosomal_L12_N PF16320.5 gi|21226289|ref|NP_632211.1| - 0.11 12.2 1.5 0.28 10.9 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain DUF86 PF01934.17 gi|21226290|ref|NP_632212.1| - 4.4e-25 87.9 0.0 5.4e-25 87.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 GYD PF08734.11 gi|21226291|ref|NP_632213.1| - 6.9e-22 77.2 0.0 8.1e-22 77.0 0.0 1.1 1 0 0 1 1 1 1 GYD domain HCV_NS4b PF01001.19 gi|21226291|ref|NP_632213.1| - 0.065 12.8 0.0 0.21 11.2 0.0 1.7 2 0 0 2 2 2 0 Hepatitis C virus non-structural protein NS4b BRCT PF00533.26 gi|21226291|ref|NP_632213.1| - 0.12 12.8 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain PRODH PF18327.1 gi|21226291|ref|NP_632213.1| - 0.12 12.6 0.9 3.7 7.9 0.1 2.7 2 1 0 2 2 2 0 Proline utilization A proline dehydrogenase N-terminal domain UvrD-helicase PF00580.21 gi|21226292|ref|NP_632214.1| - 7e-43 147.3 7.4 4.4e-22 79.0 0.0 3.2 3 1 0 4 4 4 2 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 gi|21226292|ref|NP_632214.1| - 1.3e-38 133.3 0.0 3.1e-23 82.7 0.0 2.8 3 0 0 3 3 3 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 gi|21226292|ref|NP_632214.1| - 1.1e-26 93.9 0.0 1.8e-26 93.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain PDDEXK_1 PF12705.7 gi|21226292|ref|NP_632214.1| - 2.8e-20 73.3 0.1 5.4e-20 72.4 0.1 1.5 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Cas_Cas4 PF01930.17 gi|21226292|ref|NP_632214.1| - 6e-12 46.0 3.2 1.3e-11 44.8 3.2 1.6 1 0 0 1 1 1 1 Domain of unknown function DUF83 UvrD_C_2 PF13538.6 gi|21226292|ref|NP_632214.1| - 2.1e-09 37.0 0.0 6.4e-08 32.3 0.0 2.6 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain DUF2800 PF10926.8 gi|21226292|ref|NP_632214.1| - 3.9e-06 26.4 0.3 7.6e-06 25.4 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2800) Viral_helicase1 PF01443.18 gi|21226292|ref|NP_632214.1| - 5.1e-06 26.4 0.0 0.03 14.1 0.0 3.7 4 0 0 4 4 4 2 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 gi|21226292|ref|NP_632214.1| - 1.7e-05 24.6 0.1 0.0094 15.7 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_12 PF13087.6 gi|21226292|ref|NP_632214.1| - 0.033 13.8 0.2 1.3 8.6 0.0 3.1 3 0 0 3 3 3 0 AAA domain TryThrA_C PF12319.8 gi|21226292|ref|NP_632214.1| - 1.2 8.6 9.2 1.8 8.0 5.1 2.7 2 1 0 2 2 2 0 Tryptophan-Threonine-rich plasmodium antigen C terminal DUF4277 PF14104.6 gi|21226293|ref|NP_632215.1| - 1.8e-38 131.2 0.0 3.6e-38 130.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|21226293|ref|NP_632215.1| - 2.2e-12 47.1 0.4 5.1e-11 42.6 0.4 2.2 1 1 0 1 1 1 1 Transposase DDE domain ArgoMid PF16487.5 gi|21226293|ref|NP_632215.1| - 0.099 12.9 0.3 8 6.8 0.0 3.0 3 0 0 3 3 3 0 Mid domain of argonaute Nmad3 PF18754.1 gi|21226294|ref|NP_632216.1| - 5.6e-07 29.4 0.0 5.9e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 Nucleotide modification associated domain 3 Zn_ribbon_2 PF12674.7 gi|21226294|ref|NP_632216.1| - 0.085 13.5 0.0 0.16 12.7 0.0 1.5 1 0 0 1 1 1 0 Putative zinc ribbon domain N6_N4_Mtase PF01555.18 gi|21226295|ref|NP_632217.1| - 1.1e-33 116.9 1.9 1.1e-33 116.9 1.9 3.0 2 1 0 2 2 2 1 DNA methylase Cons_hypoth95 PF03602.15 gi|21226295|ref|NP_632217.1| - 0.024 14.3 0.0 0.92 9.1 0.0 2.7 2 0 0 2 2 2 0 Conserved hypothetical protein 95 ApoLp-III PF07464.11 gi|21226296|ref|NP_632218.1| - 0.005 16.9 0.0 0.0059 16.7 0.0 1.0 1 0 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) ResIII PF04851.15 gi|21226297|ref|NP_632219.1| - 8.7e-12 45.4 4.1 2.1e-11 44.1 0.4 2.9 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|21226297|ref|NP_632219.1| - 9.4e-05 22.2 0.0 0.00015 21.6 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase SWI2_SNF2 PF18766.1 gi|21226297|ref|NP_632219.1| - 0.0063 16.2 0.0 0.0098 15.6 0.0 1.3 1 0 0 1 1 1 1 SWI2/SNF2 ATPase DUF87 PF01935.17 gi|21226298|ref|NP_632220.1| - 0.021 14.9 0.3 0.021 14.9 0.3 1.9 2 0 0 2 2 2 0 Helicase HerA, central domain NurA PF09376.10 gi|21226299|ref|NP_632221.1| - 3.5e-11 43.2 0.2 5.9e-11 42.5 0.2 1.4 1 1 0 1 1 1 1 NurA domain HATPase_c_4 PF13749.6 gi|21226300|ref|NP_632222.1| - 1.1e-16 60.7 0.0 2.4e-16 59.6 0.0 1.6 1 0 0 1 1 1 1 Putative ATP-dependent DNA helicase recG C-terminal AlbA_2 PF04326.14 gi|21226300|ref|NP_632222.1| - 1.4e-15 57.7 0.1 4e-15 56.2 0.1 1.8 1 0 0 1 1 1 1 Putative DNA-binding domain HTH_24 PF13412.6 gi|21226300|ref|NP_632222.1| - 6.2e-10 38.5 2.4 1.5e-09 37.3 2.2 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|21226300|ref|NP_632222.1| - 1.5e-05 25.4 0.1 3.3e-05 24.3 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_AsnC-type PF13404.6 gi|21226300|ref|NP_632222.1| - 5e-05 23.1 0.3 0.00011 21.9 0.3 1.7 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Rrf2 PF02082.20 gi|21226300|ref|NP_632222.1| - 0.00081 19.7 0.1 0.0024 18.2 0.1 1.8 1 0 0 1 1 1 1 Transcriptional regulator MarR PF01047.22 gi|21226300|ref|NP_632222.1| - 0.00086 19.2 0.4 0.0023 17.8 0.4 1.8 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|21226300|ref|NP_632222.1| - 0.0012 18.7 0.8 0.0042 17.0 0.8 1.9 1 0 0 1 1 1 1 HTH domain LexA_DNA_bind PF01726.16 gi|21226300|ref|NP_632222.1| - 0.0017 18.1 1.5 0.0061 16.3 1.5 2.0 1 1 0 1 1 1 1 LexA DNA binding domain TrmB PF01978.19 gi|21226300|ref|NP_632222.1| - 0.0095 15.8 0.1 0.033 14.1 0.1 1.9 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FaeA PF04703.12 gi|21226300|ref|NP_632222.1| - 0.032 14.6 0.1 0.061 13.7 0.1 1.5 1 0 0 1 1 1 0 FaeA-like protein Fe_dep_repress PF01325.19 gi|21226300|ref|NP_632222.1| - 0.043 14.0 0.3 0.2 11.9 0.1 2.2 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 gi|21226300|ref|NP_632222.1| - 0.044 13.8 0.1 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF4423 PF14394.6 gi|21226300|ref|NP_632222.1| - 0.054 13.2 0.0 0.17 11.6 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) RPA_C PF08784.11 gi|21226300|ref|NP_632222.1| - 0.089 13.5 0.0 0.23 12.2 0.0 1.6 1 0 0 1 1 1 0 Replication protein A C terminal MarR_2 PF12802.7 gi|21226300|ref|NP_632222.1| - 0.09 12.7 0.1 0.2 11.5 0.1 1.6 1 0 0 1 1 1 0 MarR family HTH_10 PF04967.12 gi|21226300|ref|NP_632222.1| - 0.14 11.9 0.7 0.58 10.0 0.2 2.4 2 0 0 2 2 2 0 HTH DNA binding domain YusW PF14039.6 gi|21226301|ref|NP_632223.1| - 0.033 14.7 0.2 0.038 14.5 0.2 1.1 1 0 0 1 1 1 0 YusW-like protein Unstab_antitox PF09720.10 gi|21226301|ref|NP_632223.1| - 0.053 13.6 0.2 0.062 13.4 0.2 1.2 1 0 0 1 1 1 0 Putative addiction module component Rbsn PF11464.8 gi|21226302|ref|NP_632224.1| - 0.0061 16.3 0.1 0.026 14.2 0.0 2.1 2 0 0 2 2 2 1 Rabenosyn Rab binding domain DUF2283 PF10049.9 gi|21226303|ref|NP_632225.1| - 3e-09 37.0 5.9 3.4e-09 36.8 4.8 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2283) HicB_lk_antitox PF15919.5 gi|21226304|ref|NP_632226.1| - 2.2e-06 27.8 0.2 2.3e-06 27.7 0.2 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF1902 PF08972.11 gi|21226304|ref|NP_632226.1| - 0.022 14.7 0.0 0.023 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1902) YhcG_C PF06250.11 gi|21226305|ref|NP_632227.1| - 1.8e-60 203.2 1.0 3.6e-60 202.3 1.0 1.5 1 0 0 1 1 1 1 YhcG PDDEXK nuclease domain DUF1016_N PF17761.1 gi|21226305|ref|NP_632227.1| - 1.3e-47 161.4 1.8 2.2e-47 160.7 1.8 1.4 1 0 0 1 1 1 1 DUF1016 N-terminal domain HATPase_c_4 PF13749.6 gi|21226307|ref|NP_632229.1| - 0.00021 21.4 0.0 0.00032 20.8 0.0 1.2 1 0 0 1 1 1 1 Putative ATP-dependent DNA helicase recG C-terminal HATPase_c_4 PF13749.6 gi|21226308|ref|NP_632230.1| - 1.2e-08 35.0 0.0 2.6e-08 33.9 0.0 1.6 2 0 0 2 2 2 1 Putative ATP-dependent DNA helicase recG C-terminal HTH_24 PF13412.6 gi|21226308|ref|NP_632230.1| - 0.0081 15.7 0.1 0.014 14.9 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_DeoR PF08220.12 gi|21226308|ref|NP_632230.1| - 0.0087 15.8 0.1 0.015 15.1 0.1 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Phage_XkdX PF09693.10 gi|21226308|ref|NP_632230.1| - 0.018 15.0 0.3 0.048 13.7 0.3 1.7 1 0 0 1 1 1 0 Phage uncharacterised protein (Phage_XkdX) TrmB PF01978.19 gi|21226308|ref|NP_632230.1| - 0.11 12.4 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB PIN PF01850.21 gi|21226309|ref|NP_632231.1| - 3.1e-09 37.4 0.0 1.2e-08 35.5 0.0 1.8 1 1 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|21226309|ref|NP_632231.1| - 0.0016 18.9 0.3 0.075 13.5 0.0 2.2 1 1 1 2 2 2 1 PIN domain DUF5615 PF18480.1 gi|21226309|ref|NP_632231.1| - 0.0017 18.0 0.0 0.0036 17.0 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) PIN_3 PF13470.6 gi|21226309|ref|NP_632231.1| - 0.0085 16.8 0.0 0.015 16.0 0.0 1.4 1 1 0 1 1 1 1 PIN domain DUF4325 PF14213.6 gi|21226310|ref|NP_632232.1| - 6e-13 48.3 0.2 6e-13 48.3 0.2 1.5 2 0 0 2 2 2 1 STAS-like domain of unknown function (DUF4325) LigD_N PF13298.6 gi|21226311|ref|NP_632233.1| - 1.4e-37 128.1 0.0 1.8e-37 127.8 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase Ligase (LigD) Rubrerythrin PF02915.17 gi|21226312|ref|NP_632234.1| - 2.1e-06 28.1 0.6 2.3e-06 28.1 0.6 1.1 1 0 0 1 1 1 1 Rubrerythrin COQ7 PF03232.13 gi|21226312|ref|NP_632234.1| - 0.0016 18.2 0.1 0.002 18.0 0.1 1.0 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 Ferritin_2 PF13668.6 gi|21226312|ref|NP_632234.1| - 0.012 15.8 0.2 0.012 15.8 0.2 1.1 1 0 0 1 1 1 0 Ferritin-like domain DUF2383 PF09537.10 gi|21226312|ref|NP_632234.1| - 0.028 14.8 0.1 0.034 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2383) Mn_catalase PF05067.12 gi|21226312|ref|NP_632234.1| - 0.048 12.6 0.3 0.052 12.5 0.3 1.0 1 0 0 1 1 1 0 Manganese containing catalase DUF5617 PF18493.1 gi|21226312|ref|NP_632234.1| - 0.085 13.0 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) Lectin_like PF18560.1 gi|21226313|ref|NP_632235.1| - 9e-59 198.1 1.3 3.3e-58 196.3 1.3 2.0 1 0 0 1 1 1 1 Lectin like domain Peptidase_C1 PF00112.23 gi|21226313|ref|NP_632235.1| - 1.3e-29 103.8 0.0 2.3e-29 103.1 0.0 1.4 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.20 gi|21226313|ref|NP_632235.1| - 6.3e-08 32.3 2.5 6.3e-08 32.3 2.5 3.0 3 0 0 3 3 3 2 PKD domain Peptidase_C1_2 PF03051.15 gi|21226313|ref|NP_632235.1| - 0.0001 21.3 0.3 0.028 13.2 0.1 2.3 2 0 0 2 2 2 2 Peptidase C1-like family Pcc1 PF09341.10 gi|21226314|ref|NP_632236.1| - 0.011 15.9 0.0 0.014 15.5 0.0 1.2 1 0 0 1 1 1 0 Transcription factor Pcc1 DHHA1 PF02272.19 gi|21226315|ref|NP_632237.1| - 1.3e-13 51.5 0.3 4.5e-13 49.8 0.1 2.1 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|21226315|ref|NP_632237.1| - 5.3e-05 23.4 0.3 0.00014 22.0 0.1 1.7 2 0 0 2 2 2 1 DHH family Lactonase PF10282.9 gi|21226316|ref|NP_632238.1| - 1.2e-15 57.7 8.3 6.6e-07 28.9 0.4 4.0 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|21226316|ref|NP_632238.1| - 4.6e-11 41.9 8.1 3e-06 26.0 0.9 3.2 1 1 1 3 3 3 3 Cytochrome D1 heme domain SGL PF08450.12 gi|21226316|ref|NP_632238.1| - 4.7e-08 32.9 10.4 0.0018 17.9 1.0 4.1 1 1 3 4 4 4 4 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 gi|21226316|ref|NP_632238.1| - 8.9e-08 32.2 9.6 5.7 7.2 0.1 6.3 1 1 5 6 6 6 4 Arylesterase PD40 PF07676.12 gi|21226316|ref|NP_632238.1| - 4e-06 26.6 0.1 48 4.0 0.0 6.2 6 0 0 6 6 6 0 WD40-like Beta Propeller Repeat NHL PF01436.21 gi|21226316|ref|NP_632238.1| - 2.2e-05 24.3 20.1 1 9.5 0.1 7.8 7 0 0 7 7 7 1 NHL repeat P_proprotein PF01483.20 gi|21226316|ref|NP_632238.1| - 0.0013 18.7 1.9 21 5.2 0.0 5.3 4 1 2 6 6 6 0 Proprotein convertase P-domain Bac_rhamnosid_C PF17390.2 gi|21226316|ref|NP_632238.1| - 0.011 15.5 0.0 0.041 13.7 0.0 2.0 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase C-terminal domain HSP9_HSP12 PF04119.12 gi|21226316|ref|NP_632238.1| - 0.033 14.6 0.0 2.3 8.7 0.0 3.6 4 0 0 4 4 4 0 Heat shock protein 9/12 PAS_2 PF08446.11 gi|21226316|ref|NP_632238.1| - 0.036 14.8 0.0 4.8 7.9 0.0 3.5 1 1 2 3 3 3 0 PAS fold Arm-DNA-bind_3 PF13356.6 gi|21226316|ref|NP_632238.1| - 0.041 14.3 0.0 70 3.9 0.0 4.8 1 1 1 2 2 2 0 Arm DNA-binding domain DUF1513 PF07433.11 gi|21226316|ref|NP_632238.1| - 0.06 12.4 3.6 24 3.9 0.0 3.4 2 1 0 3 3 3 0 Protein of unknown function (DUF1513) PP2C PF00481.21 gi|21226316|ref|NP_632238.1| - 9.8 5.7 7.0 24 4.5 0.2 3.3 2 2 0 3 3 3 0 Protein phosphatase 2C BatD PF13584.6 gi|21226317|ref|NP_632239.1| - 0.00092 18.1 0.1 0.0013 17.7 0.1 1.2 1 0 0 1 1 1 1 Oxygen tolerance Invasin_D3 PF09134.10 gi|21226318|ref|NP_632240.1| - 1.1e-06 28.8 4.5 7.8e-06 26.1 0.6 3.0 3 0 0 3 3 3 1 Invasin, domain 3 He_PIG PF05345.12 gi|21226318|ref|NP_632240.1| - 0.0021 18.2 0.9 0.011 15.8 0.1 2.5 3 0 0 3 3 3 1 Putative Ig domain Big_1 PF02369.16 gi|21226318|ref|NP_632240.1| - 0.036 14.1 1.0 0.33 11.0 0.2 2.7 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 1) FlgD_ig PF13860.6 gi|21226318|ref|NP_632240.1| - 0.039 13.8 0.2 0.38 10.7 0.0 2.5 2 1 0 2 2 2 0 FlgD Ig-like domain Big_6 PF17936.1 gi|21226318|ref|NP_632240.1| - 0.061 13.6 1.1 0.79 10.0 0.2 2.3 2 0 0 2 2 2 0 Bacterial Ig domain PGF-CTERM PF18204.1 gi|21226319|ref|NP_632241.1| - 0.049 13.6 0.5 0.1 12.6 0.5 1.5 1 0 0 1 1 1 0 PGF-CTERM motif Big_3_4 PF13754.6 gi|21226320|ref|NP_632242.1| - 0.0023 17.6 0.5 1.3 8.7 0.0 3.1 3 0 0 3 3 3 2 Domain of unknown function YbbR PF07949.12 gi|21226320|ref|NP_632242.1| - 0.11 12.9 0.0 0.37 11.2 0.0 1.9 1 0 0 1 1 1 0 YbbR-like protein Big_3_2 PF12245.8 gi|21226320|ref|NP_632242.1| - 0.12 12.7 0.5 31 4.8 0.0 3.8 3 1 1 4 4 4 0 Bacterial Ig-like domain COG2 PF06148.11 gi|21226321|ref|NP_632243.1| - 0.0002 21.4 0.1 0.00045 20.3 0.1 1.6 1 0 0 1 1 1 1 COG (conserved oligomeric Golgi) complex component, COG2 Gla PF00594.20 gi|21226321|ref|NP_632243.1| - 0.053 13.7 3.7 0.33 11.2 0.8 2.7 2 0 0 2 2 2 0 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain DUF2963 PF11178.8 gi|21226321|ref|NP_632243.1| - 0.081 12.6 2.4 0.33 10.7 2.4 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) DUF5418 PF17439.2 gi|21226322|ref|NP_632244.1| - 0.0019 18.3 0.1 0.0024 17.9 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5418) O-antigen_lig PF13425.6 gi|21226322|ref|NP_632244.1| - 0.092 11.5 1.3 0.11 11.3 1.3 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF2101 PF09874.9 gi|21226322|ref|NP_632244.1| - 0.28 10.9 2.7 0.33 10.6 2.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Radical_SAM PF04055.21 gi|21226323|ref|NP_632245.1| - 3.5e-11 43.8 0.0 9.6e-11 42.3 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily HHH_3 PF12836.7 gi|21226323|ref|NP_632245.1| - 0.00029 21.0 0.0 0.00054 20.2 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif Thi4 PF01946.17 gi|21226324|ref|NP_632246.1| - 6.4e-74 248.1 0.2 7.3e-74 247.9 0.2 1.0 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 gi|21226324|ref|NP_632246.1| - 2e-06 27.4 0.4 2.9e-06 26.9 0.4 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|21226324|ref|NP_632246.1| - 3.5e-06 26.5 0.1 4.3e-06 26.2 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|21226324|ref|NP_632246.1| - 1.2e-05 25.5 0.4 3.1e-05 24.1 0.4 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|21226324|ref|NP_632246.1| - 2.1e-05 23.8 2.3 0.00018 20.7 0.9 2.1 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 gi|21226324|ref|NP_632246.1| - 0.00086 18.1 0.8 0.0017 17.1 1.0 1.3 1 1 0 1 1 1 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|21226324|ref|NP_632246.1| - 0.0016 17.7 0.6 0.0023 17.2 0.6 1.2 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|21226324|ref|NP_632246.1| - 0.034 13.2 0.8 0.053 12.6 0.8 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A DAO PF01266.24 gi|21226324|ref|NP_632246.1| - 0.036 13.7 2.1 0.3 10.6 0.8 2.2 1 1 1 2 2 2 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|21226324|ref|NP_632246.1| - 0.11 13.1 0.3 0.29 11.7 0.3 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|21226324|ref|NP_632246.1| - 0.12 11.4 0.5 0.2 10.7 0.5 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein Amino_oxidase PF01593.24 gi|21226324|ref|NP_632246.1| - 0.13 11.5 0.2 0.23 10.7 0.2 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase DUF1482 PF07358.11 gi|21226324|ref|NP_632246.1| - 0.13 12.2 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1482) MCRA PF06100.11 gi|21226324|ref|NP_632246.1| - 0.17 10.7 0.0 0.21 10.4 0.0 1.1 1 0 0 1 1 1 0 MCRA family META PF03724.16 gi|21226325|ref|NP_632247.1| - 1e-14 54.4 0.0 1.6e-14 53.8 0.0 1.3 1 0 0 1 1 1 1 META domain DUF5640 PF18692.1 gi|21226325|ref|NP_632247.1| - 8e-05 22.6 0.0 0.00015 21.7 0.0 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5640) Lipocalin_4 PF13648.6 gi|21226325|ref|NP_632247.1| - 0.021 15.7 0.1 0.037 15.0 0.1 1.4 1 0 0 1 1 1 0 Lipocalin-like domain DUF4923 PF16270.5 gi|21226325|ref|NP_632247.1| - 0.26 11.1 0.0 0.34 10.7 0.0 1.2 1 0 0 1 1 1 0 Lipocalin-like domain (DUF4923) PRCC PF10253.9 gi|21226325|ref|NP_632247.1| - 2.8 8.7 6.1 3.6 8.3 6.1 1.1 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting TOBE PF03459.17 gi|21226326|ref|NP_632248.1| - 1.7e-19 69.9 0.0 1.8e-19 69.8 0.0 1.0 1 0 0 1 1 1 1 TOBE domain TOBE_2 PF08402.10 gi|21226326|ref|NP_632248.1| - 0.074 13.2 0.0 0.081 13.1 0.0 1.1 1 0 0 1 1 1 0 TOBE domain TIR_2 PF13676.6 gi|21226327|ref|NP_632249.1| - 2.3e-11 44.4 0.0 3.7e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 TIR domain CpXC PF14353.6 gi|21226327|ref|NP_632249.1| - 0.0053 16.8 0.7 0.041 13.9 0.8 2.1 1 1 1 2 2 2 2 CpXC protein zf-ribbon_3 PF13248.6 gi|21226327|ref|NP_632249.1| - 0.015 14.7 1.5 0.39 10.2 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Cys_rich_CPXG PF14255.6 gi|21226327|ref|NP_632249.1| - 0.03 14.2 2.5 0.076 12.9 0.2 2.3 2 0 0 2 2 2 0 Cysteine-rich CPXCG DZR PF12773.7 gi|21226327|ref|NP_632249.1| - 0.037 14.0 0.1 0.071 13.1 0.1 1.4 1 0 0 1 1 1 0 Double zinc ribbon PyrI_C PF02748.15 gi|21226327|ref|NP_632249.1| - 0.07 13.0 4.3 0.84 9.6 0.3 2.3 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Mu-like_Com PF10122.9 gi|21226327|ref|NP_632249.1| - 0.074 12.5 0.1 0.19 11.2 0.1 1.7 1 0 0 1 1 1 0 Mu-like prophage protein Com zf-BED PF02892.15 gi|21226327|ref|NP_632249.1| - 0.11 12.5 4.7 1.3 9.1 0.1 2.7 2 1 1 3 3 3 0 BED zinc finger TIR-like PF10137.9 gi|21226327|ref|NP_632249.1| - 0.19 11.7 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 Predicted nucleotide-binding protein containing TIR-like domain TF_Zn_Ribbon PF08271.12 gi|21226327|ref|NP_632249.1| - 0.37 10.3 2.1 1.2 8.7 1.9 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|21226327|ref|NP_632249.1| - 0.96 9.3 3.9 1.5 8.7 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-Di19 PF05605.12 gi|21226327|ref|NP_632249.1| - 1.7 9.0 5.3 3.9 7.9 3.2 2.4 2 1 0 2 2 1 0 Drought induced 19 protein (Di19), zinc-binding Zn_ribbon_SprT PF17283.2 gi|21226329|ref|NP_632251.1| - 0.0011 18.8 1.2 0.0015 18.4 1.2 1.2 1 0 0 1 1 1 1 SprT-like zinc ribbon domain DUF2795 PF11387.8 gi|21226330|ref|NP_632252.1| - 7.6e-19 67.7 0.1 9.5e-19 67.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) DDE_Tnp_2 PF04693.12 gi|21226330|ref|NP_632252.1| - 0.1 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 Na_Ca_ex PF01699.24 gi|21226332|ref|NP_632254.1| - 3.2e-58 196.0 41.2 4.2e-30 104.7 15.2 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Glyoxalase_6 PF18029.1 gi|21226334|ref|NP_632256.1| - 9.8e-08 32.8 0.0 1.2e-07 32.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|21226334|ref|NP_632256.1| - 0.0039 17.4 0.0 0.0065 16.7 0.0 1.7 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily tRNA-synt_2c PF01411.19 gi|21226335|ref|NP_632257.1| - 4.2e-15 55.3 0.0 6.9e-15 54.6 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|21226335|ref|NP_632257.1| - 1.2e-12 47.7 0.4 2.2e-12 46.9 0.4 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Nudix_N PF12535.8 gi|21226335|ref|NP_632257.1| - 0.017 14.7 0.3 0.046 13.3 0.0 1.8 2 0 0 2 2 2 0 Hydrolase of X-linked nucleoside diphosphate N terminal NosD PF05048.13 gi|21226336|ref|NP_632258.1| - 4.1e-26 91.7 8.6 4.1e-26 91.7 8.6 2.0 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21226336|ref|NP_632258.1| - 2.6e-09 37.1 10.1 2.6e-09 37.1 10.1 2.4 2 1 0 2 2 2 1 Right handed beta helix region DUF4407 PF14362.6 gi|21226337|ref|NP_632259.1| - 0.0027 17.1 15.5 0.019 14.3 4.0 2.6 2 1 0 2 2 2 2 Domain of unknown function (DUF4407) GAS PF13851.6 gi|21226337|ref|NP_632259.1| - 0.0055 16.1 4.8 0.0055 16.1 4.8 3.9 3 1 0 3 3 3 1 Growth-arrest specific micro-tubule binding DUF948 PF06103.11 gi|21226337|ref|NP_632259.1| - 0.046 14.0 1.6 0.69 10.2 0.1 3.2 4 1 0 4 4 4 0 Bacterial protein of unknown function (DUF948) DUF2460 PF09343.10 gi|21226337|ref|NP_632259.1| - 0.075 12.5 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 2217 (DUF2460) COMP PF11598.8 gi|21226337|ref|NP_632259.1| - 0.079 13.4 0.6 0.64 10.5 0.1 2.8 3 0 0 3 3 3 0 Cartilage oligomeric matrix protein DUF2730 PF10805.8 gi|21226337|ref|NP_632259.1| - 0.12 12.5 7.6 0.43 10.7 0.0 4.3 3 1 2 5 5 5 0 Protein of unknown function (DUF2730) DUF1664 PF07889.12 gi|21226337|ref|NP_632259.1| - 0.86 9.7 8.1 0.63 10.1 0.1 3.6 3 2 1 4 4 4 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 gi|21226337|ref|NP_632259.1| - 4.3 6.1 34.8 1.2 7.9 10.4 3.1 2 1 1 3 3 3 0 Spc7 kinetochore protein Laminin_II PF06009.12 gi|21226337|ref|NP_632259.1| - 4.5 7.3 15.5 8.1 6.5 2.0 4.1 3 1 1 4 4 4 0 Laminin Domain II MS_channel PF00924.18 gi|21226338|ref|NP_632260.1| - 1e-48 165.7 0.3 1e-48 165.7 0.3 1.4 2 0 0 2 2 2 1 Mechanosensitive ion channel DUF4282 PF14110.6 gi|21226338|ref|NP_632260.1| - 6.3 7.6 8.2 1.3 9.8 4.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4282) DUF498 PF04430.14 gi|21226339|ref|NP_632261.1| - 1.2e-11 44.7 0.0 1.3e-11 44.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) AIM24 PF01987.17 gi|21226340|ref|NP_632262.1| - 3.7e-25 88.9 0.0 4.2e-25 88.7 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DUF166 PF02593.14 gi|21226341|ref|NP_632263.1| - 1.4e-71 240.5 0.0 1.6e-71 240.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function Fer4 PF00037.27 gi|21226342|ref|NP_632264.1| - 1.6e-15 56.2 15.3 2.7e-08 33.3 3.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21226342|ref|NP_632264.1| - 1.6e-10 40.6 14.3 1.4e-05 24.9 2.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21226342|ref|NP_632264.1| - 3.1e-10 39.5 14.0 1.1e-05 25.2 3.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21226342|ref|NP_632264.1| - 1.9e-09 37.5 24.7 1.7e-06 28.1 15.7 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21226342|ref|NP_632264.1| - 3.2e-09 36.8 10.9 8.7e-05 22.6 0.6 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21226342|ref|NP_632264.1| - 1.5e-08 35.1 14.9 4.2e-08 33.6 15.1 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226342|ref|NP_632264.1| - 2.3e-08 34.5 6.1 0.0019 18.7 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21226342|ref|NP_632264.1| - 4.6e-08 33.4 5.2 0.0015 18.9 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21226342|ref|NP_632264.1| - 5.6e-08 33.6 11.8 0.00066 20.6 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|21226342|ref|NP_632264.1| - 1.4e-07 31.5 16.5 3.7e-06 27.0 17.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21226342|ref|NP_632264.1| - 1e-06 29.2 13.7 0.0028 18.1 2.0 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|21226342|ref|NP_632264.1| - 3.4e-05 24.0 17.7 0.0012 19.1 3.9 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21226342|ref|NP_632264.1| - 6.2e-05 23.2 12.4 0.0039 17.4 12.8 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain NIL PF09383.10 gi|21226342|ref|NP_632264.1| - 0.00032 20.5 0.0 0.00045 20.0 0.0 1.1 1 0 0 1 1 1 1 NIL domain Fer4_3 PF12798.7 gi|21226342|ref|NP_632264.1| - 0.0049 17.7 23.0 0.18 12.8 6.0 2.6 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21226342|ref|NP_632264.1| - 0.017 16.0 14.0 0.18 12.7 2.0 2.2 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21226342|ref|NP_632264.1| - 0.2 12.4 13.4 1.6 9.5 2.9 2.7 3 0 0 3 3 3 0 4Fe-4S single cluster domain HcyBio PF01837.16 gi|21226343|ref|NP_632265.1| - 3.4e-143 476.7 0.2 4.5e-143 476.3 0.2 1.1 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation CBS PF00571.28 gi|21226343|ref|NP_632265.1| - 9.7e-24 83.6 2.0 1.7e-10 41.2 0.0 3.2 3 0 0 3 3 3 2 CBS domain CTP_transf_like PF01467.26 gi|21226344|ref|NP_632266.1| - 1.5e-19 70.6 0.0 1.7e-19 70.4 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|21226344|ref|NP_632266.1| - 0.035 14.0 0.1 0.068 13.1 0.1 1.6 1 1 0 1 1 1 0 FAD synthetase Urm1 PF09138.11 gi|21226344|ref|NP_632266.1| - 0.048 14.0 0.0 0.067 13.5 0.0 1.2 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) HIGH_NTase1 PF05636.11 gi|21226344|ref|NP_632266.1| - 0.099 11.8 0.0 2.8 7.1 0.0 2.0 1 1 1 2 2 2 0 HIGH Nucleotidyl Transferase DUF3219 PF11514.8 gi|21226344|ref|NP_632266.1| - 0.15 12.1 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3219) Aminotran_1_2 PF00155.21 gi|21226345|ref|NP_632267.1| - 7.1e-66 222.8 0.0 8.1e-66 222.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|21226345|ref|NP_632267.1| - 0.0094 14.5 0.0 0.015 13.9 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Rsbr_N PF08678.10 gi|21226345|ref|NP_632267.1| - 0.031 14.3 0.0 0.37 10.9 0.0 2.4 2 1 0 2 2 2 0 Rsbr N terminal Aminotran_5 PF00266.19 gi|21226345|ref|NP_632267.1| - 0.042 12.8 0.0 0.067 12.1 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class-V DMRL_synthase PF00885.19 gi|21226346|ref|NP_632268.1| - 1.5e-29 102.6 0.1 1.7e-29 102.5 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DMRL_synthase PF00885.19 gi|21226347|ref|NP_632269.1| - 7.3e-16 58.3 0.1 8.7e-16 58.0 0.1 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Aminotran_5 PF00266.19 gi|21226348|ref|NP_632270.1| - 4.1e-44 151.0 0.0 5e-44 150.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|21226348|ref|NP_632270.1| - 0.0036 16.7 0.1 0.032 13.5 0.0 2.0 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|21226348|ref|NP_632270.1| - 0.098 11.9 0.0 0.18 11.1 0.0 1.5 1 1 0 1 1 1 0 Beta-eliminating lyase CBS PF00571.28 gi|21226349|ref|NP_632271.1| - 7.1e-18 64.8 7.4 1.2e-09 38.5 0.8 2.7 3 0 0 3 3 3 2 CBS domain HTH_3 PF01381.22 gi|21226349|ref|NP_632271.1| - 2.1e-15 56.5 0.4 1.6e-14 53.6 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 gi|21226349|ref|NP_632271.1| - 1.9e-12 47.3 0.1 4.6e-12 46.1 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|21226349|ref|NP_632271.1| - 3e-07 30.4 0.1 7.2e-07 29.1 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|21226349|ref|NP_632271.1| - 0.00012 21.9 0.1 0.00022 21.0 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|21226349|ref|NP_632271.1| - 0.00037 20.9 0.0 0.0012 19.3 0.0 1.8 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 gi|21226349|ref|NP_632271.1| - 0.00042 20.2 0.1 0.0018 18.2 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Pou PF00157.17 gi|21226349|ref|NP_632271.1| - 0.0057 16.6 0.0 0.018 15.0 0.0 1.9 1 1 0 1 1 1 1 Pou domain - N-terminal to homeobox domain MqsA_antitoxin PF15731.5 gi|21226349|ref|NP_632271.1| - 0.027 14.6 0.0 0.046 13.8 0.0 1.3 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_24 PF13412.6 gi|21226349|ref|NP_632271.1| - 0.048 13.2 0.8 0.41 10.3 0.0 2.7 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding LacI PF00356.21 gi|21226349|ref|NP_632271.1| - 0.067 13.0 2.6 4.6 7.1 0.1 2.9 2 1 0 2 2 2 0 Bacterial regulatory proteins, lacI family MarR_2 PF12802.7 gi|21226349|ref|NP_632271.1| - 0.1 12.5 0.0 0.51 10.3 0.0 2.1 2 0 0 2 2 2 0 MarR family HTH_23 PF13384.6 gi|21226349|ref|NP_632271.1| - 0.14 12.0 0.0 8.9 6.3 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain MarR PF01047.22 gi|21226349|ref|NP_632271.1| - 0.16 11.9 0.2 1.1 9.3 0.0 2.3 3 0 0 3 3 3 0 MarR family TetR_N PF00440.23 gi|21226349|ref|NP_632271.1| - 0.22 11.4 0.0 0.46 10.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family AAA PF00004.29 gi|21226350|ref|NP_632272.1| - 2.8e-97 322.2 0.0 7.2e-48 162.4 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|21226350|ref|NP_632272.1| - 2.3e-31 107.3 0.3 1.5e-15 56.7 0.1 2.8 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|21226350|ref|NP_632272.1| - 9e-27 93.1 0.0 5e-26 90.7 0.1 2.3 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_16 PF13191.6 gi|21226350|ref|NP_632272.1| - 5e-17 62.8 0.0 2.9e-08 34.3 0.0 3.0 2 1 0 2 2 2 2 AAA ATPase domain CDC48_2 PF02933.17 gi|21226350|ref|NP_632272.1| - 8e-15 54.4 0.8 5.9e-14 51.6 0.3 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 RuvB_N PF05496.12 gi|21226350|ref|NP_632272.1| - 2.3e-14 53.5 0.0 4.1e-06 26.6 0.0 2.7 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|21226350|ref|NP_632272.1| - 6.1e-14 52.5 0.0 7.6e-08 32.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|21226350|ref|NP_632272.1| - 5.2e-12 45.9 0.8 8.5e-05 22.6 0.0 3.8 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|21226350|ref|NP_632272.1| - 1.7e-11 44.5 0.3 0.00088 19.6 0.0 4.3 2 2 1 4 4 4 2 AAA domain AAA_14 PF13173.6 gi|21226350|ref|NP_632272.1| - 2.6e-11 43.7 0.0 3.1e-06 27.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|21226350|ref|NP_632272.1| - 3.5e-10 39.6 0.0 0.00044 19.6 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|21226350|ref|NP_632272.1| - 1.7e-09 38.0 0.0 0.00013 22.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|21226350|ref|NP_632272.1| - 7.3e-09 35.6 0.0 0.0033 17.2 0.0 2.9 3 0 0 3 3 3 2 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|21226350|ref|NP_632272.1| - 3.8e-08 33.2 0.0 0.0076 16.0 0.0 3.3 3 1 0 3 3 3 2 Sigma-54 interaction domain NACHT PF05729.12 gi|21226350|ref|NP_632272.1| - 8.2e-08 32.3 0.2 0.12 12.3 0.0 4.0 3 1 1 4 4 4 2 NACHT domain Mg_chelatase PF01078.21 gi|21226350|ref|NP_632272.1| - 1.3e-07 31.2 0.5 0.015 14.7 0.1 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI ABC_tran PF00005.27 gi|21226350|ref|NP_632272.1| - 2.5e-07 31.3 0.0 0.009 16.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_18 PF13238.6 gi|21226350|ref|NP_632272.1| - 3.4e-07 30.9 0.0 0.043 14.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|21226350|ref|NP_632272.1| - 6.5e-07 29.7 0.0 0.052 13.9 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_24 PF13479.6 gi|21226350|ref|NP_632272.1| - 9e-07 28.8 0.0 0.024 14.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 gi|21226350|ref|NP_632272.1| - 1.6e-06 27.8 0.0 0.076 12.5 0.0 2.6 2 0 0 2 2 2 2 P-loop containing dynein motor region Parvo_NS1 PF01057.17 gi|21226350|ref|NP_632272.1| - 3e-06 26.5 0.0 0.021 13.9 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_28 PF13521.6 gi|21226350|ref|NP_632272.1| - 3.7e-06 27.3 0.0 0.063 13.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain Zeta_toxin PF06414.12 gi|21226350|ref|NP_632272.1| - 9.9e-06 25.0 0.0 0.14 11.4 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin TsaE PF02367.17 gi|21226350|ref|NP_632272.1| - 1.7e-05 24.8 0.0 0.25 11.4 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Vps4_C PF09336.10 gi|21226350|ref|NP_632272.1| - 1.9e-05 24.6 0.0 0.25 11.4 0.0 2.9 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain PhoH PF02562.16 gi|21226350|ref|NP_632272.1| - 2.3e-05 24.0 0.3 0.45 9.9 0.0 3.6 3 0 0 3 3 3 2 PhoH-like protein ATPase PF06745.13 gi|21226350|ref|NP_632272.1| - 2.8e-05 23.6 0.2 0.71 9.2 0.0 3.3 2 1 0 3 3 3 2 KaiC NB-ARC PF00931.22 gi|21226350|ref|NP_632272.1| - 3.8e-05 23.0 0.0 0.18 11.0 0.0 2.6 2 0 0 2 2 2 2 NB-ARC domain AAA_3 PF07726.11 gi|21226350|ref|NP_632272.1| - 7.5e-05 22.6 0.0 0.45 10.4 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|21226350|ref|NP_632272.1| - 7.6e-05 22.6 0.0 0.25 11.1 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|21226350|ref|NP_632272.1| - 0.00013 21.7 5.8 0.42 10.2 0.2 3.8 2 2 1 3 3 3 2 AAA domain DUF2075 PF09848.9 gi|21226350|ref|NP_632272.1| - 0.00016 21.1 0.0 0.42 9.8 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Sigma54_activ_2 PF14532.6 gi|21226350|ref|NP_632272.1| - 0.00022 21.4 0.0 0.57 10.3 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 gi|21226350|ref|NP_632272.1| - 0.00028 20.7 0.0 0.58 9.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|21226350|ref|NP_632272.1| - 0.00047 20.1 0.0 2.7 7.8 0.0 3.2 2 1 0 2 2 2 2 ATPase domain predominantly from Archaea Guanylate_kin PF00625.21 gi|21226350|ref|NP_632272.1| - 0.00075 19.2 0.2 14 5.3 0.0 4.2 2 2 2 4 4 4 0 Guanylate kinase AAA_19 PF13245.6 gi|21226350|ref|NP_632272.1| - 0.00083 19.7 0.0 1.7 9.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|21226350|ref|NP_632272.1| - 0.001 19.5 0.0 1.2 9.6 0.0 3.0 3 0 0 3 3 2 1 AAA domain DUF815 PF05673.13 gi|21226350|ref|NP_632272.1| - 0.0013 17.9 0.0 1.6 7.8 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Bac_DnaA PF00308.18 gi|21226350|ref|NP_632272.1| - 0.003 17.4 0.1 2.7 7.8 0.0 2.9 2 1 0 2 2 2 1 Bacterial dnaA protein ResIII PF04851.15 gi|21226350|ref|NP_632272.1| - 0.0035 17.4 0.0 1.6 8.7 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit TniB PF05621.11 gi|21226350|ref|NP_632272.1| - 0.0044 16.5 0.0 1.9 7.9 0.0 3.3 4 0 0 4 4 4 1 Bacterial TniB protein AFG1_ATPase PF03969.16 gi|21226350|ref|NP_632272.1| - 0.013 14.4 0.0 2 7.2 0.0 2.3 2 0 0 2 2 2 0 AFG1-like ATPase NTPase_1 PF03266.15 gi|21226350|ref|NP_632272.1| - 0.021 14.7 0.1 9.5 6.1 0.0 3.1 2 1 0 3 3 3 0 NTPase CPT PF07931.12 gi|21226350|ref|NP_632272.1| - 0.021 14.7 0.0 4.3 7.2 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein Cytidylate_kin PF02224.18 gi|21226350|ref|NP_632272.1| - 0.033 13.9 0.1 7.4 6.2 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase Viral_helicase1 PF01443.18 gi|21226350|ref|NP_632272.1| - 0.044 13.5 0.0 3.7 7.2 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase SKI PF01202.22 gi|21226350|ref|NP_632272.1| - 0.053 13.6 0.1 14 5.8 0.0 2.9 3 0 0 3 3 3 0 Shikimate kinase Hydin_ADK PF17213.3 gi|21226350|ref|NP_632272.1| - 0.07 13.4 0.3 2.7 8.2 0.0 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain AAA_29 PF13555.6 gi|21226350|ref|NP_632272.1| - 0.077 12.7 0.0 16 5.3 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain KAP_NTPase PF07693.14 gi|21226350|ref|NP_632272.1| - 0.079 12.2 0.2 11 5.1 0.0 3.0 2 2 0 2 2 2 0 KAP family P-loop domain PduV-EutP PF10662.9 gi|21226350|ref|NP_632272.1| - 0.081 12.7 0.0 12 5.6 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Torsin PF06309.11 gi|21226350|ref|NP_632272.1| - 0.093 12.8 0.0 8.4 6.5 0.0 2.4 2 0 0 2 2 2 0 Torsin T2SSE PF00437.20 gi|21226350|ref|NP_632272.1| - 0.098 11.7 0.0 14 4.6 0.0 2.5 2 0 0 2 2 2 0 Type II/IV secretion system protein IPT PF01745.16 gi|21226350|ref|NP_632272.1| - 0.13 11.6 0.0 19 4.5 0.0 2.7 3 0 0 3 3 3 0 Isopentenyl transferase cobW PF02492.19 gi|21226350|ref|NP_632272.1| - 0.17 11.4 0.1 15 5.1 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain FMN_red PF03358.15 gi|21226351|ref|NP_632273.1| - 2.5e-17 63.0 0.0 3.2e-17 62.7 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21226351|ref|NP_632273.1| - 0.0001 22.1 0.0 0.00027 20.7 0.0 1.7 1 1 0 1 1 1 1 Flavodoxin-like fold DDE_Tnp_IS66 PF03050.14 gi|21226352|ref|NP_632274.1| - 4.4e-73 246.2 0.0 5.1e-73 246.0 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21226352|ref|NP_632274.1| - 4e-09 36.7 4.4 1.3e-08 35.1 4.4 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21226352|ref|NP_632274.1| - 6.8e-06 26.4 2.5 0.12 12.6 0.1 3.0 2 1 0 3 3 3 2 DDE domain DZR PF12773.7 gi|21226352|ref|NP_632274.1| - 0.041 13.9 0.6 0.2 11.7 0.3 2.4 2 1 0 2 2 2 0 Double zinc ribbon zf-RING_5 PF14634.6 gi|21226352|ref|NP_632274.1| - 0.11 12.4 5.5 0.98 9.4 0.0 3.1 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_2 PF13240.6 gi|21226352|ref|NP_632274.1| - 0.13 12.1 6.1 2.6 7.9 0.2 2.8 2 0 0 2 2 2 0 zinc-ribbon domain Thioredoxin_2 PF13098.6 gi|21226352|ref|NP_632274.1| - 0.28 11.7 1.5 0.47 10.9 0.3 2.0 2 0 0 2 2 2 0 Thioredoxin-like domain zf-ribbon_3 PF13248.6 gi|21226352|ref|NP_632274.1| - 0.62 9.5 6.3 1 8.9 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21226352|ref|NP_632274.1| - 0.89 9.7 3.7 5.5 7.2 2.3 2.8 2 1 0 2 2 1 0 Zinc ribbon domain Mut7-C PF01927.16 gi|21226352|ref|NP_632274.1| - 2.7 8.1 4.9 0.88 9.7 1.8 1.7 2 0 0 2 2 2 0 Mut7-C RNAse domain zinc_ribbon_15 PF17032.5 gi|21226352|ref|NP_632274.1| - 3.2 8.6 7.2 0.42 11.4 1.8 2.2 2 1 0 2 2 2 0 zinc-ribbon family Lar_restr_allev PF14354.6 gi|21226352|ref|NP_632274.1| - 5.2 7.5 7.9 0.61 10.5 0.3 2.9 3 0 0 3 3 3 0 Restriction alleviation protein Lar YhfH PF14149.6 gi|21226352|ref|NP_632274.1| - 8.7 6.4 8.7 42 4.2 0.2 3.5 3 0 0 3 3 3 0 YhfH-like protein HTH_45 PF14947.6 gi|21226354|ref|NP_632276.1| - 1.8e-22 79.1 0.9 1.9e-22 79.0 0.9 1.0 1 0 0 1 1 1 1 Winged helix-turn-helix Rrf2 PF02082.20 gi|21226354|ref|NP_632276.1| - 0.01 16.2 0.1 0.016 15.5 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator AAA PF00004.29 gi|21226355|ref|NP_632277.1| - 1e-10 42.2 0.0 2.5e-10 40.9 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|21226355|ref|NP_632277.1| - 3.4e-05 23.7 0.0 6.3e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 gi|21226355|ref|NP_632277.1| - 8.9e-05 22.5 0.0 0.00018 21.5 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_assoc_2 PF16193.5 gi|21226355|ref|NP_632277.1| - 0.00013 22.2 0.2 0.00033 20.9 0.2 1.7 1 0 0 1 1 1 1 AAA C-terminal domain AAA_16 PF13191.6 gi|21226355|ref|NP_632277.1| - 0.00021 21.7 0.0 0.00063 20.2 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|21226355|ref|NP_632277.1| - 0.00022 21.5 1.1 0.51 10.6 0.0 3.4 2 2 1 3 3 3 2 AAA domain AAA_14 PF13173.6 gi|21226355|ref|NP_632277.1| - 0.0054 16.8 0.0 0.013 15.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain DNA_pol3_delta2 PF13177.6 gi|21226355|ref|NP_632277.1| - 0.0066 16.2 0.0 2.2 8.0 0.0 2.8 2 1 1 3 3 3 1 DNA polymerase III, delta subunit AAA_6 PF12774.7 gi|21226355|ref|NP_632277.1| - 0.015 14.3 0.0 0.1 11.5 0.0 2.0 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region IPT PF01745.16 gi|21226355|ref|NP_632277.1| - 0.016 14.6 0.0 0.048 13.0 0.0 1.8 2 0 0 2 2 2 0 Isopentenyl transferase IstB_IS21 PF01695.17 gi|21226355|ref|NP_632277.1| - 0.03 14.1 0.0 0.055 13.2 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_24 PF13479.6 gi|21226355|ref|NP_632277.1| - 0.043 13.5 0.0 0.099 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|21226355|ref|NP_632277.1| - 0.044 13.0 0.0 0.064 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_30 PF13604.6 gi|21226355|ref|NP_632277.1| - 0.074 12.8 0.2 0.15 11.8 0.2 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|21226355|ref|NP_632277.1| - 0.079 12.5 0.1 0.29 10.7 0.1 1.8 1 1 1 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|21226355|ref|NP_632277.1| - 0.11 12.0 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 gi|21226355|ref|NP_632277.1| - 0.12 12.2 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase RNA_helicase PF00910.22 gi|21226355|ref|NP_632277.1| - 0.14 12.6 0.0 0.33 11.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase NACHT PF05729.12 gi|21226355|ref|NP_632277.1| - 0.15 11.9 0.0 0.67 9.8 0.0 2.0 2 0 0 2 2 2 0 NACHT domain DUF3357 PF11837.8 gi|21226355|ref|NP_632277.1| - 0.19 12.2 0.4 0.62 10.5 0.4 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) PTA_PTB PF01515.19 gi|21226356|ref|NP_632278.1| - 7.1e-05 22.3 0.0 0.11 11.7 0.0 2.2 1 1 1 2 2 2 2 Phosphate acetyl/butaryl transferase MtrA PF04208.14 gi|21226357|ref|NP_632279.1| - 3.2e-46 157.1 0.1 4e-46 156.8 0.1 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrH PF02007.18 gi|21226358|ref|NP_632280.1| - 2.7e-120 401.0 0.2 3.1e-120 400.8 0.2 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit DDE_Tnp_1 PF01609.21 gi|21226360|ref|NP_632282.1| - 2.6e-12 46.8 1.1 3.9e-12 46.3 1.1 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.9 gi|21226360|ref|NP_632282.1| - 0.0044 17.1 0.4 0.014 15.4 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) DDE_Tnp_1_4 PF13701.6 gi|21226360|ref|NP_632282.1| - 0.028 12.7 1.9 0.071 11.4 1.9 1.7 1 1 0 1 1 1 0 Transposase DDE domain group 1 ILVD_EDD PF00920.21 gi|21226361|ref|NP_632283.1| - 2.6e-222 739.0 0.4 3e-222 738.8 0.4 1.0 1 0 0 1 1 1 1 Dehydratase family PAS_3 PF08447.12 gi|21226362|ref|NP_632284.1| - 4e-54 180.9 2.5 7.3e-19 67.9 0.0 3.3 3 0 0 3 3 3 3 PAS fold PAS PF00989.25 gi|21226362|ref|NP_632284.1| - 3.3e-12 46.4 0.3 0.00035 20.5 0.0 3.4 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.10 gi|21226362|ref|NP_632284.1| - 9e-09 35.6 0.0 0.066 13.5 0.0 4.0 4 0 0 4 4 4 2 PAS fold PAS_9 PF13426.7 gi|21226362|ref|NP_632284.1| - 2.7e-08 34.0 3.5 0.028 14.7 0.3 3.5 3 0 0 3 3 3 3 PAS domain GAF_2 PF13185.6 gi|21226362|ref|NP_632284.1| - 3.6e-06 27.3 0.0 9.6e-06 25.9 0.0 1.7 2 0 0 2 2 1 1 GAF domain GAF_3 PF13492.6 gi|21226362|ref|NP_632284.1| - 6.8e-05 23.2 0.0 0.00013 22.3 0.0 1.5 1 0 0 1 1 1 1 GAF domain PAS_11 PF14598.6 gi|21226362|ref|NP_632284.1| - 0.00076 19.6 0.0 1.5 8.9 0.0 3.3 3 0 0 3 3 3 1 PAS domain GAF PF01590.26 gi|21226362|ref|NP_632284.1| - 0.0063 17.1 0.0 0.012 16.2 0.0 1.5 1 0 0 1 1 1 1 GAF domain LicD PF04991.13 gi|21226362|ref|NP_632284.1| - 0.0065 16.6 0.8 3.7 7.6 0.0 3.2 3 0 0 3 3 3 1 LicD family VanY PF02557.17 gi|21226362|ref|NP_632284.1| - 0.0071 16.1 0.0 0.85 9.4 0.0 3.0 3 0 0 3 3 3 1 D-alanyl-D-alanine carboxypeptidase R2K_2 PF18299.1 gi|21226362|ref|NP_632284.1| - 0.066 13.1 0.5 54 3.6 0.0 3.5 3 0 0 3 3 3 0 ATP-grasp domain, R2K clade family 2 POT1 PF02765.17 gi|21226362|ref|NP_632284.1| - 0.097 12.5 0.0 11 5.8 0.0 3.0 3 0 0 3 3 3 0 Telomeric single stranded DNA binding POT1/CDC13 Thr_dehydrat_C PF00585.18 gi|21226362|ref|NP_632284.1| - 0.1 12.4 1.1 8.1 6.3 0.0 3.8 3 1 1 4 4 4 0 C-terminal regulatory domain of Threonine dehydratase Holin_SPP1 PF04688.13 gi|21226362|ref|NP_632284.1| - 0.13 12.4 0.2 40 4.5 0.0 3.3 3 0 0 3 3 3 0 SPP1 phage holin Tudor_2 PF18104.1 gi|21226362|ref|NP_632284.1| - 0.15 11.8 0.4 12 5.7 0.0 2.7 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain FAM165 PF14981.6 gi|21226362|ref|NP_632284.1| - 0.28 11.0 1.1 22 4.9 0.1 2.6 2 0 0 2 2 2 0 FAM165 family Myb_CC_LHEQLE PF14379.6 gi|21226362|ref|NP_632284.1| - 0.6 9.9 4.9 4.3 7.1 0.2 3.5 3 0 0 3 3 3 0 MYB-CC type transfactor, LHEQLE motif Flavodoxin_1 PF00258.25 gi|21226363|ref|NP_632285.1| - 4.8e-14 52.8 0.0 8.9e-14 51.9 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.7 gi|21226363|ref|NP_632285.1| - 1.6e-08 34.9 0.0 2.5e-08 34.3 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin domain Flavodoxin_3 PF12641.7 gi|21226363|ref|NP_632285.1| - 6.3e-05 22.7 0.0 8.5e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain DUF1724 PF08350.10 gi|21226364|ref|NP_632286.1| - 2.5e-17 62.8 0.0 5.4e-17 61.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21226364|ref|NP_632286.1| - 0.0051 16.6 0.2 0.01 15.7 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|21226364|ref|NP_632286.1| - 0.019 14.9 0.4 0.048 13.6 0.4 1.7 1 0 0 1 1 1 0 HTH domain DUF1699 PF08004.11 gi|21226365|ref|NP_632287.1| - 6.3e-62 207.0 1.0 7.2e-62 206.8 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|21226365|ref|NP_632287.1| - 0.047 14.0 0.0 0.077 13.3 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) PAM2 PF07145.15 gi|21226365|ref|NP_632287.1| - 0.064 13.0 0.1 8.4 6.3 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region DUF4394 PF14339.6 gi|21226365|ref|NP_632287.1| - 0.2 11.0 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) PKD PF00801.20 gi|21226367|ref|NP_632289.1| - 1.1e-85 281.5 65.5 1.2e-15 57.1 1.7 7.4 7 0 0 7 7 7 7 PKD domain MG2 PF01835.19 gi|21226367|ref|NP_632289.1| - 1.6e-13 50.9 17.0 0.32 11.5 0.1 7.2 4 2 3 7 7 7 7 MG2 domain PKD_3 PF16820.5 gi|21226367|ref|NP_632289.1| - 1.1e-09 37.8 24.3 0.24 11.2 0.2 7.5 7 0 0 7 7 7 7 PKD-like domain DUF1724 PF08350.10 gi|21226368|ref|NP_632290.1| - 7.4e-18 64.4 0.2 1.4e-17 63.5 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) Inhibitor_I42 PF09394.10 gi|21226371|ref|NP_632293.1| - 4.8e-28 97.4 0.7 4.8e-28 97.4 0.7 1.6 2 0 0 2 2 2 1 Chagasin family peptidase inhibitor I42 Inhibitor_I71 PF12628.7 gi|21226371|ref|NP_632293.1| - 0.1 12.4 0.2 0.28 11.0 0.1 1.7 2 0 0 2 2 2 0 Falstatin, cysteine peptidase inhibitor FtsX_ECD PF18075.1 gi|21226373|ref|NP_632295.1| - 0.046 14.4 0.1 0.055 14.1 0.1 1.2 1 0 0 1 1 1 0 FtsX extracellular domain DUF2145 PF09916.9 gi|21226373|ref|NP_632295.1| - 0.15 11.7 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2145) HTH_5 PF01022.20 gi|21226374|ref|NP_632296.1| - 8.5e-07 28.8 0.1 1.5e-06 28.0 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|21226374|ref|NP_632296.1| - 2.8e-05 23.8 0.0 5e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|21226374|ref|NP_632296.1| - 0.00044 20.7 0.0 0.00099 19.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|21226374|ref|NP_632296.1| - 0.00067 19.5 0.0 0.0011 18.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|21226374|ref|NP_632296.1| - 0.0014 18.5 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|21226374|ref|NP_632296.1| - 0.0015 18.3 0.1 0.0029 17.5 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_40 PF14493.6 gi|21226374|ref|NP_632296.1| - 0.0016 18.8 0.4 0.0035 17.8 0.4 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|21226374|ref|NP_632296.1| - 0.0018 17.8 0.0 0.0037 16.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding FUR PF01475.19 gi|21226374|ref|NP_632296.1| - 0.006 16.7 0.2 0.012 15.7 0.2 1.4 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_29 PF13551.6 gi|21226374|ref|NP_632296.1| - 0.019 15.0 0.0 0.034 14.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_7 PF02796.15 gi|21226374|ref|NP_632296.1| - 0.023 14.7 0.0 0.042 13.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_20 PF12840.7 gi|21226374|ref|NP_632296.1| - 0.035 14.2 0.0 0.058 13.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain TetR_N PF00440.23 gi|21226374|ref|NP_632296.1| - 0.044 13.6 0.1 0.15 11.9 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family Phage_rep_O PF04492.13 gi|21226374|ref|NP_632296.1| - 0.044 14.4 0.0 0.091 13.4 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage replication protein O MarR PF01047.22 gi|21226374|ref|NP_632296.1| - 0.057 13.4 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.20 gi|21226374|ref|NP_632296.1| - 0.11 12.9 0.0 0.2 12.0 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.11 gi|21226374|ref|NP_632296.1| - 0.12 12.5 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Ferritin PF00210.24 gi|21226374|ref|NP_632296.1| - 0.15 12.0 1.7 0.41 10.6 0.7 1.9 2 0 0 2 2 2 0 Ferritin-like domain zf-CHY PF05495.12 gi|21226375|ref|NP_632297.1| - 0.2 12.2 1.0 0.48 10.9 1.0 1.5 1 0 0 1 1 1 0 CHY zinc finger Zn_ribbon_SprT PF17283.2 gi|21226375|ref|NP_632297.1| - 0.47 10.4 1.9 1.2 9.1 1.9 1.6 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|21226375|ref|NP_632297.1| - 1.6 8.8 3.2 3.1 7.9 2.0 2.0 2 0 0 2 2 2 0 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|21226375|ref|NP_632297.1| - 1.9 8.0 5.3 2.8 7.5 1.9 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding PLDc_2 PF13091.6 gi|21226376|ref|NP_632298.1| - 9.9e-20 70.8 0.3 1.2e-19 70.5 0.3 1.0 1 0 0 1 1 1 1 PLD-like domain Regulator_TrmB PF11495.8 gi|21226376|ref|NP_632298.1| - 1.8e-06 27.3 0.1 2.1e-06 27.1 0.1 1.0 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB FAM83 PF07894.12 gi|21226376|ref|NP_632298.1| - 8.7e-05 22.2 0.3 0.0012 18.5 0.3 2.0 1 1 0 1 1 1 1 FAM83 A-H PP_kinase_C PF13090.6 gi|21226376|ref|NP_632298.1| - 0.031 13.8 0.0 0.17 11.4 0.0 1.9 1 1 0 1 1 1 0 Polyphosphate kinase C-terminal domain 2 PLDc PF00614.22 gi|21226376|ref|NP_632298.1| - 0.083 13.1 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Phospholipase D Active site motif DUF1998 PF09369.10 gi|21226377|ref|NP_632299.1| - 1.2e-07 32.4 0.3 3e-07 31.1 0.3 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) Helicase_C PF00271.31 gi|21226378|ref|NP_632300.1| - 2.1e-07 31.3 0.1 6.4e-07 29.7 0.1 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HhH-GPD PF00730.25 gi|21226379|ref|NP_632301.1| - 1.3e-06 28.8 0.0 1.8e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein EndIII_4Fe-2S PF10576.9 gi|21226379|ref|NP_632301.1| - 0.0051 17.1 5.4 0.0078 16.5 5.4 1.3 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III TPR_6 PF13174.6 gi|21226379|ref|NP_632301.1| - 0.18 12.5 0.1 0.79 10.5 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat DNA_methylase PF00145.17 gi|21226380|ref|NP_632302.1| - 5.2e-58 197.0 0.6 1.7e-52 178.9 0.1 2.0 2 0 0 2 2 2 2 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.10 gi|21226380|ref|NP_632302.1| - 0.0084 15.7 1.2 0.043 13.4 0.2 2.3 2 1 0 2 2 2 1 RNA cap guanine-N2 methyltransferase Sigma54_activ_2 PF14532.6 gi|21226380|ref|NP_632302.1| - 0.041 14.0 0.0 0.073 13.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain PCMD PF13201.6 gi|21226380|ref|NP_632302.1| - 0.12 12.1 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 Putative carbohydrate metabolism domain DUF3458_C PF17432.2 gi|21226381|ref|NP_632303.1| - 6.2e-34 117.8 2.0 9e-34 117.3 2.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3458_C) ARM repeats Peptidase_M1 PF01433.20 gi|21226381|ref|NP_632303.1| - 4e-27 95.2 0.0 7.9e-27 94.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain DUF3458 PF11940.8 gi|21226381|ref|NP_632303.1| - 7.5e-10 39.1 0.0 1.8e-09 37.9 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Ig-like fold Peptidase_M1_N PF17900.1 gi|21226381|ref|NP_632303.1| - 1e-09 38.9 0.0 2e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain DUF1622 PF07784.11 gi|21226382|ref|NP_632304.1| - 1.2e-20 73.2 0.2 1.9e-20 72.5 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) DUF4271 PF14093.6 gi|21226382|ref|NP_632304.1| - 0.041 13.8 2.6 0.053 13.4 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) Sdh_cyt PF01127.22 gi|21226382|ref|NP_632304.1| - 0.099 12.7 0.4 0.16 12.0 0.4 1.3 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF1622 PF07784.11 gi|21226383|ref|NP_632305.1| - 1.1e-19 70.1 0.5 1.6e-19 69.6 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) AgrB PF04647.15 gi|21226383|ref|NP_632305.1| - 0.028 13.8 0.5 0.036 13.4 0.5 1.1 1 0 0 1 1 1 0 Accessory gene regulator B DUF502 PF04367.13 gi|21226383|ref|NP_632305.1| - 0.11 12.4 0.3 0.23 11.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF502) Bromodomain PF00439.25 gi|21226383|ref|NP_632305.1| - 0.15 12.2 0.4 0.26 11.4 0.1 1.5 2 0 0 2 2 2 0 Bromodomain PALP PF00291.25 gi|21226384|ref|NP_632306.1| - 8.9e-81 271.5 2.7 1e-80 271.3 2.7 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme C1_2 PF03107.16 gi|21226384|ref|NP_632306.1| - 0.15 12.4 2.0 0.35 11.2 2.0 1.6 1 0 0 1 1 1 0 C1 domain zinc-ribbons_6 PF07191.12 gi|21226384|ref|NP_632306.1| - 0.15 12.0 0.5 0.29 11.1 0.5 1.5 1 0 0 1 1 1 0 zinc-ribbons zinc_ribbon_2 PF13240.6 gi|21226384|ref|NP_632306.1| - 0.25 11.1 2.6 0.51 10.1 2.6 1.6 1 0 0 1 1 1 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|21226384|ref|NP_632306.1| - 0.3 10.8 1.6 21 5.0 0.1 2.5 2 0 0 2 2 2 0 A2L zinc ribbon domain tRNA-synt_1 PF00133.22 gi|21226385|ref|NP_632307.1| - 5.4e-56 190.1 0.1 2.4e-40 138.4 0.0 2.8 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|21226385|ref|NP_632307.1| - 2.3e-25 89.2 0.6 1e-11 44.3 0.0 3.2 3 0 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|21226385|ref|NP_632307.1| - 1.1e-21 77.3 0.2 2.1e-21 76.5 0.2 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|21226385|ref|NP_632307.1| - 5.3e-10 39.1 0.1 3e-06 26.8 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|21226385|ref|NP_632307.1| - 6.5e-07 29.0 0.0 1.2e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1d PF00750.19 gi|21226385|ref|NP_632307.1| - 0.0051 15.8 0.0 0.0091 15.0 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (R) tRNA-synt_1f PF01921.18 gi|21226385|ref|NP_632307.1| - 0.0071 15.3 0.0 0.015 14.2 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (K) CN_hydrolase PF00795.22 gi|21226386|ref|NP_632308.1| - 3.9e-49 167.4 0.0 1.3e-46 159.1 0.0 2.0 1 1 0 1 1 1 1 Carbon-nitrogen hydrolase PvlArgDC PF01862.16 gi|21226388|ref|NP_632310.1| - 5.4e-56 188.9 0.0 6e-56 188.7 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) DS PF01916.17 gi|21226389|ref|NP_632311.1| - 2.8e-99 332.0 0.0 3.2e-99 331.8 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase CdAMP_rec PF06153.11 gi|21226389|ref|NP_632311.1| - 0.069 13.4 0.1 0.18 12.0 0.0 1.7 2 0 0 2 2 2 0 Cyclic-di-AMP receptor ArsR PF09824.9 gi|21226390|ref|NP_632312.1| - 2e-66 222.5 0.0 2.2e-66 222.3 0.0 1.0 1 0 0 1 1 1 1 ArsR transcriptional regulator SMC_ScpB PF04079.16 gi|21226390|ref|NP_632312.1| - 0.0071 16.0 0.0 0.18 11.4 0.0 2.1 2 0 0 2 2 2 1 Segregation and condensation complex subunit ScpB HTH_20 PF12840.7 gi|21226390|ref|NP_632312.1| - 0.02 15.0 0.0 0.39 10.8 0.0 2.4 2 1 0 2 2 2 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|21226391|ref|NP_632313.1| - 9.9e-11 41.4 0.1 4.2e-10 39.4 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|21226391|ref|NP_632313.1| - 1.4e-10 40.6 0.3 4.9e-10 38.8 0.0 2.2 3 0 0 3 3 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|21226391|ref|NP_632313.1| - 3.9e-08 33.1 0.3 4.1e-06 26.7 0.0 3.0 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|21226391|ref|NP_632313.1| - 5.4e-07 29.4 0.2 2.8e-06 27.1 0.0 2.2 3 0 0 3 3 3 1 MarR family HTH_3 PF01381.22 gi|21226391|ref|NP_632313.1| - 4.3e-05 23.5 0.1 0.0036 17.3 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix Mnd1 PF03962.15 gi|21226391|ref|NP_632313.1| - 4.8e-05 23.6 0.1 0.0011 19.3 0.0 2.7 3 0 0 3 3 3 1 Mnd1 HTH domain HTH_11 PF08279.12 gi|21226391|ref|NP_632313.1| - 0.00011 22.1 0.1 0.00023 21.0 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_45 PF14947.6 gi|21226391|ref|NP_632313.1| - 0.00011 22.1 0.0 0.00021 21.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix Rrf2 PF02082.20 gi|21226391|ref|NP_632313.1| - 0.00023 21.4 0.0 0.00059 20.1 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator HTH_27 PF13463.6 gi|21226391|ref|NP_632313.1| - 0.00053 20.4 0.0 0.0014 19.1 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|21226391|ref|NP_632313.1| - 0.0011 19.2 0.1 0.0044 17.2 0.0 2.0 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.10 gi|21226391|ref|NP_632313.1| - 0.0024 17.6 0.0 0.0055 16.5 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_28 PF13518.6 gi|21226391|ref|NP_632313.1| - 0.0026 17.8 0.0 0.02 15.0 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_36 PF13730.6 gi|21226391|ref|NP_632313.1| - 0.0065 16.4 0.0 0.017 15.0 0.0 1.7 2 0 0 2 2 1 1 Helix-turn-helix domain DUF4423 PF14394.6 gi|21226391|ref|NP_632313.1| - 0.0086 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_23 PF13384.6 gi|21226391|ref|NP_632313.1| - 0.0088 15.8 0.0 0.024 14.4 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HxlR PF01638.17 gi|21226391|ref|NP_632313.1| - 0.013 15.3 0.1 0.036 13.9 0.1 1.7 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_13 PF11972.8 gi|21226391|ref|NP_632313.1| - 0.018 15.1 0.1 0.11 12.6 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain DUF4364 PF14277.6 gi|21226391|ref|NP_632313.1| - 0.023 14.5 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) GntR PF00392.21 gi|21226391|ref|NP_632313.1| - 0.028 14.1 0.3 0.084 12.5 0.0 2.0 2 0 0 2 2 1 0 Bacterial regulatory proteins, gntR family HTH_10 PF04967.12 gi|21226391|ref|NP_632313.1| - 0.031 14.1 0.0 0.095 12.5 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain HTH_5 PF01022.20 gi|21226391|ref|NP_632313.1| - 0.037 13.9 0.0 0.089 12.7 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Phage_rep_O PF04492.13 gi|21226391|ref|NP_632313.1| - 0.041 14.5 0.0 0.12 13.0 0.0 1.8 1 0 0 1 1 1 0 Bacteriophage replication protein O Mrr_N PF14338.6 gi|21226391|ref|NP_632313.1| - 0.077 13.1 0.1 0.53 10.5 0.0 2.3 2 1 0 2 2 1 0 Mrr N-terminal domain TrmB PF01978.19 gi|21226391|ref|NP_632313.1| - 0.077 12.9 0.1 0.2 11.6 0.1 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB AbiEi_4 PF13338.6 gi|21226391|ref|NP_632313.1| - 0.12 12.6 0.0 0.33 11.1 0.0 1.8 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin YdaS_antitoxin PF15943.5 gi|21226391|ref|NP_632313.1| - 0.12 12.2 0.1 0.49 10.3 0.0 2.1 2 0 0 2 2 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Metallophos_2 PF12850.7 gi|21226392|ref|NP_632314.1| - 2.8e-26 92.7 0.0 3.5e-26 92.3 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|21226392|ref|NP_632314.1| - 0.00031 21.3 0.3 0.043 14.3 0.0 2.2 1 1 0 2 2 2 2 Calcineurin-like phosphoesterase HH_signal PF01085.18 gi|21226395|ref|NP_632317.1| - 0.00013 21.6 0.1 0.39 10.4 0.0 3.1 3 0 0 3 3 3 2 Hedgehog amino-terminal signalling domain tRNA_anti-codon PF01336.25 gi|21226395|ref|NP_632317.1| - 0.0016 18.4 0.1 0.04 13.9 0.0 2.6 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain POT1 PF02765.17 gi|21226395|ref|NP_632317.1| - 0.0028 17.5 0.0 2.5 7.9 0.0 2.4 2 0 0 2 2 2 2 Telomeric single stranded DNA binding POT1/CDC13 Sec-ASP3 PF15432.6 gi|21226395|ref|NP_632317.1| - 0.074 13.2 0.0 3.9 7.6 0.0 2.5 2 0 0 2 2 2 0 Accessory Sec secretory system ASP3 OAR PF03826.17 gi|21226395|ref|NP_632317.1| - 0.14 12.0 1.8 15 5.6 0.3 3.4 3 0 0 3 3 3 0 OAR domain Na_H_Exchanger PF00999.21 gi|21226396|ref|NP_632318.1| - 3.3e-42 144.6 43.0 4.3e-42 144.3 43.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|21226396|ref|NP_632318.1| - 1.6e-25 89.7 0.1 2.9e-25 88.8 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|21226396|ref|NP_632318.1| - 8.4e-12 44.8 0.7 3.9e-11 42.6 0.1 2.3 2 0 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.6 gi|21226396|ref|NP_632318.1| - 5.5e-06 26.8 0.4 1.4e-05 25.5 0.2 1.8 2 0 0 2 2 1 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|21226396|ref|NP_632318.1| - 9.1e-05 22.1 0.6 0.00017 21.2 0.6 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|21226396|ref|NP_632318.1| - 0.0019 18.4 0.2 0.0034 17.7 0.2 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 gi|21226396|ref|NP_632318.1| - 0.0023 17.6 0.1 0.004 16.8 0.1 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA SepA PF17080.5 gi|21226396|ref|NP_632318.1| - 0.0026 18.1 1.1 0.0026 18.1 1.1 2.6 2 1 0 2 2 2 1 Multidrug Resistance efflux pump NAD_binding_2 PF03446.15 gi|21226396|ref|NP_632318.1| - 0.0047 17.1 0.1 0.0097 16.1 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|21226396|ref|NP_632318.1| - 0.005 17.4 1.5 0.0068 17.0 0.3 2.0 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|21226396|ref|NP_632318.1| - 0.012 15.5 0.2 0.021 14.7 0.2 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|21226396|ref|NP_632318.1| - 0.013 14.9 0.1 0.026 13.9 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|21226396|ref|NP_632318.1| - 0.068 12.5 0.3 0.14 11.4 0.3 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 gi|21226396|ref|NP_632318.1| - 0.093 11.9 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain NmrA PF05368.13 gi|21226396|ref|NP_632318.1| - 0.097 12.2 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 NmrA-like family Homoserine_dh PF00742.19 gi|21226396|ref|NP_632318.1| - 0.11 12.4 0.0 3.6 7.5 0.0 2.4 2 0 0 2 2 2 0 Homoserine dehydrogenase Pyr_redox PF00070.27 gi|21226396|ref|NP_632318.1| - 0.13 12.8 0.9 0.29 11.7 0.2 2.0 2 0 0 2 2 1 0 Pyridine nucleotide-disulphide oxidoreductase BPD_transp_1 PF00528.22 gi|21226397|ref|NP_632319.1| - 5.5e-22 78.4 17.9 7.4e-22 78.0 17.7 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|21226398|ref|NP_632320.1| - 1.9e-23 83.2 12.7 2.7e-23 82.7 12.7 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|21226399|ref|NP_632321.1| - 3.4e-31 108.6 0.0 5.6e-31 107.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21226399|ref|NP_632321.1| - 1.2e-09 38.4 0.8 0.00014 21.7 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system CBS PF00571.28 gi|21226399|ref|NP_632321.1| - 4.3e-05 23.9 0.0 0.081 13.4 0.0 2.6 2 0 0 2 2 2 2 CBS domain AAA_16 PF13191.6 gi|21226399|ref|NP_632321.1| - 0.00023 21.6 0.0 0.00036 21.0 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|21226399|ref|NP_632321.1| - 0.0012 18.5 0.0 0.0023 17.7 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|21226399|ref|NP_632321.1| - 0.0029 17.3 0.0 0.0058 16.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|21226399|ref|NP_632321.1| - 0.0041 17.4 0.0 0.011 16.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|21226399|ref|NP_632321.1| - 0.0093 15.3 0.0 0.015 14.6 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_15 PF13175.6 gi|21226399|ref|NP_632321.1| - 0.012 15.4 0.0 0.018 14.7 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 gi|21226399|ref|NP_632321.1| - 0.018 14.7 0.0 0.035 13.7 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SMC_N PF02463.19 gi|21226399|ref|NP_632321.1| - 0.018 14.5 0.0 0.75 9.2 0.0 2.1 1 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 gi|21226399|ref|NP_632321.1| - 0.019 14.3 0.0 0.034 13.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 gi|21226399|ref|NP_632321.1| - 0.059 13.3 0.0 0.094 12.6 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 gi|21226399|ref|NP_632321.1| - 0.1 12.6 0.0 0.35 10.9 0.0 1.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NTPase_1 PF03266.15 gi|21226399|ref|NP_632321.1| - 0.12 12.3 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 NTPase G-alpha PF00503.20 gi|21226399|ref|NP_632321.1| - 0.12 11.5 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_5 PF07728.14 gi|21226399|ref|NP_632321.1| - 0.13 12.3 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|21226399|ref|NP_632321.1| - 0.19 11.9 0.0 0.37 10.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|21226399|ref|NP_632321.1| - 0.19 11.3 0.0 0.31 10.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|21226399|ref|NP_632321.1| - 0.22 12.0 0.3 0.42 11.1 0.3 1.4 1 0 0 1 1 1 0 AAA domain OpuAC PF04069.12 gi|21226400|ref|NP_632322.1| - 2e-63 214.4 0.3 2.6e-63 214.0 0.3 1.1 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system NTP_transferase PF00483.23 gi|21226401|ref|NP_632323.1| - 2.3e-38 132.2 0.0 3e-38 131.8 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|21226401|ref|NP_632323.1| - 6.3e-15 54.2 26.6 9.8e-08 31.4 6.7 5.2 2 1 2 5 5 5 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|21226401|ref|NP_632323.1| - 2.5e-13 50.7 0.0 3.5e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|21226401|ref|NP_632323.1| - 3.1e-06 27.1 0.0 7e-06 25.9 0.0 1.6 1 1 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Hexapep_2 PF14602.6 gi|21226401|ref|NP_632323.1| - 1.7e-05 24.5 24.2 4.9e-05 23.0 4.3 4.4 3 1 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase AroM PF07302.11 gi|21226401|ref|NP_632323.1| - 0.098 12.0 0.0 0.33 10.3 0.0 1.7 1 1 1 2 2 2 0 AroM protein DUF4954 PF16314.5 gi|21226401|ref|NP_632323.1| - 1.2 7.1 7.2 0.9 7.6 1.2 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4954) SIS PF01380.22 gi|21226402|ref|NP_632324.1| - 9.7e-58 193.7 1.4 1.1e-27 96.5 0.1 2.8 3 0 0 3 3 3 2 SIS domain GATase_6 PF13522.6 gi|21226402|ref|NP_632324.1| - 7.7e-21 74.7 0.0 1.8e-20 73.5 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|21226402|ref|NP_632324.1| - 4.5e-16 58.9 0.0 1.3e-15 57.4 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|21226402|ref|NP_632324.1| - 2.8e-05 23.2 0.0 4.5e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF5124 PF17160.4 gi|21226402|ref|NP_632324.1| - 0.087 13.6 0.0 0.21 12.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5124) PGM_PMM_I PF02878.16 gi|21226403|ref|NP_632325.1| - 7.4e-38 129.4 0.0 1.4e-37 128.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|21226403|ref|NP_632325.1| - 3.7e-28 98.1 0.0 9.5e-28 96.8 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|21226403|ref|NP_632325.1| - 5.7e-20 71.6 0.0 9.9e-20 70.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|21226403|ref|NP_632325.1| - 1.6e-10 41.0 0.1 3.9e-10 39.8 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain CinA_KH PF18146.1 gi|21226403|ref|NP_632325.1| - 0.031 14.4 0.2 12 6.2 0.0 2.7 2 0 0 2 2 2 0 Damage-inducible protein CinA KH domain Methyltransf_23 PF13489.6 gi|21226403|ref|NP_632325.1| - 0.19 11.5 0.0 0.54 10.1 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain NTP_transferase PF00483.23 gi|21226404|ref|NP_632326.1| - 2.7e-44 151.6 0.0 3.5e-44 151.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|21226404|ref|NP_632326.1| - 7.9e-15 53.9 23.0 9.6e-09 34.6 0.4 4.9 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|21226404|ref|NP_632326.1| - 1.2e-12 48.4 0.0 1.5e-12 48.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF4954 PF16314.5 gi|21226404|ref|NP_632326.1| - 2.4e-06 26.0 0.1 3.5e-06 25.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Hexapep_2 PF14602.6 gi|21226404|ref|NP_632326.1| - 1.1e-05 25.1 9.9 0.00098 18.8 1.2 4.7 4 1 2 6 6 6 2 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|21226404|ref|NP_632326.1| - 0.00012 21.8 0.0 0.00042 20.1 0.0 1.8 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YfcL PF08891.11 gi|21226404|ref|NP_632326.1| - 0.18 12.2 0.1 3.6 8.0 0.0 2.4 2 0 0 2 2 2 0 YfcL protein AAA PF00004.29 gi|21226406|ref|NP_632328.1| - 2e-36 125.3 0.0 3.3e-36 124.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 gi|21226406|ref|NP_632328.1| - 1.3e-09 38.4 0.0 3.9e-09 36.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_lid_3 PF17862.1 gi|21226406|ref|NP_632328.1| - 9.2e-06 25.4 0.2 1.9e-05 24.3 0.2 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_22 PF13401.6 gi|21226406|ref|NP_632328.1| - 1.6e-05 25.2 0.4 0.0014 18.9 0.0 2.5 1 1 1 2 2 2 1 AAA domain TIP49 PF06068.13 gi|21226406|ref|NP_632328.1| - 2e-05 24.0 0.0 6.2e-05 22.4 0.0 1.7 1 1 1 2 2 2 1 TIP49 P-loop domain AAA_5 PF07728.14 gi|21226406|ref|NP_632328.1| - 0.00012 22.1 0.0 0.00045 20.2 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|21226406|ref|NP_632328.1| - 0.00015 22.2 0.2 0.018 15.4 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_28 PF13521.6 gi|21226406|ref|NP_632328.1| - 0.00044 20.5 0.0 0.0011 19.2 0.0 1.7 2 0 0 2 2 1 1 AAA domain RuvB_N PF05496.12 gi|21226406|ref|NP_632328.1| - 0.00059 19.6 0.0 0.0018 18.0 0.0 1.9 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain IstB_IS21 PF01695.17 gi|21226406|ref|NP_632328.1| - 0.00064 19.5 0.0 0.0011 18.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_18 PF13238.6 gi|21226406|ref|NP_632328.1| - 0.0016 19.0 0.0 0.0037 17.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|21226406|ref|NP_632328.1| - 0.0017 17.7 0.0 0.0034 16.8 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|21226406|ref|NP_632328.1| - 0.0027 17.2 0.1 0.023 14.2 0.0 2.1 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_33 PF13671.6 gi|21226406|ref|NP_632328.1| - 0.0033 17.6 0.0 0.0056 16.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|21226406|ref|NP_632328.1| - 0.0033 16.6 0.0 0.01 15.0 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF815) TsaE PF02367.17 gi|21226406|ref|NP_632328.1| - 0.023 14.7 0.0 0.043 13.8 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 gi|21226406|ref|NP_632328.1| - 0.026 14.2 0.0 0.063 13.0 0.0 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_24 PF13479.6 gi|21226406|ref|NP_632328.1| - 0.028 14.2 0.1 0.065 12.9 0.1 1.5 1 1 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 gi|21226406|ref|NP_632328.1| - 0.029 14.2 0.0 0.066 13.0 0.0 1.5 1 1 0 1 1 1 0 Bacterial dnaA protein RNA_helicase PF00910.22 gi|21226406|ref|NP_632328.1| - 0.033 14.6 0.0 0.078 13.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase TniB PF05621.11 gi|21226406|ref|NP_632328.1| - 0.033 13.6 0.0 0.11 11.9 0.0 1.8 2 0 0 2 2 2 0 Bacterial TniB protein Parvo_NS1 PF01057.17 gi|21226406|ref|NP_632328.1| - 0.035 13.2 0.0 0.063 12.4 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 IPT PF01745.16 gi|21226406|ref|NP_632328.1| - 0.042 13.2 0.0 0.079 12.3 0.0 1.4 1 0 0 1 1 1 0 Isopentenyl transferase PduV-EutP PF10662.9 gi|21226406|ref|NP_632328.1| - 0.044 13.5 0.0 0.087 12.6 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ABC_tran PF00005.27 gi|21226406|ref|NP_632328.1| - 0.077 13.5 0.0 0.21 12.1 0.0 1.7 1 0 0 1 1 1 0 ABC transporter PhoH PF02562.16 gi|21226406|ref|NP_632328.1| - 0.087 12.3 0.0 0.21 11.0 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein Torsin PF06309.11 gi|21226406|ref|NP_632328.1| - 0.088 12.9 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 Torsin NACHT PF05729.12 gi|21226406|ref|NP_632328.1| - 0.15 12.0 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Cytidylate_kin PF02224.18 gi|21226406|ref|NP_632328.1| - 0.17 11.6 0.2 0.68 9.6 0.0 2.0 3 0 0 3 3 3 0 Cytidylate kinase Lactamase_B_2 PF12706.7 gi|21226408|ref|NP_632330.1| - 5e-21 75.1 0.0 3.2e-19 69.2 0.0 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|21226408|ref|NP_632330.1| - 3.3e-08 33.8 0.0 1.1e-07 32.0 0.0 1.9 2 1 1 3 3 3 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|21226408|ref|NP_632330.1| - 6.3e-05 22.6 0.0 0.00011 21.8 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease NAD_binding_10 PF13460.6 gi|21226408|ref|NP_632330.1| - 0.096 12.6 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding TP_methylase PF00590.20 gi|21226409|ref|NP_632331.1| - 3.1e-55 187.4 0.2 3.6e-55 187.2 0.2 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases HEM4 PF02602.15 gi|21226410|ref|NP_632332.1| - 8e-45 153.0 0.0 1e-44 152.7 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Radical_SAM PF04055.21 gi|21226411|ref|NP_632333.1| - 6.1e-24 85.3 0.0 6.5e-23 81.9 0.0 2.1 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|21226411|ref|NP_632333.1| - 1.6e-10 41.4 0.0 3.2e-10 40.4 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|21226411|ref|NP_632333.1| - 5.8e-07 29.6 0.0 1e-06 28.9 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|21226411|ref|NP_632333.1| - 3.3e-05 24.3 0.1 0.0001 22.7 0.1 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain APH PF01636.23 gi|21226412|ref|NP_632334.1| - 1.3e-28 100.6 0.0 1.5e-28 100.4 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Fructosamin_kin PF03881.14 gi|21226412|ref|NP_632334.1| - 3.3e-05 23.2 0.0 4.5e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Fructosamine kinase APH PF01636.23 gi|21226413|ref|NP_632335.1| - 1.4e-05 25.1 0.0 2.2e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 gi|21226413|ref|NP_632335.1| - 0.016 14.8 0.0 4 7.0 0.1 2.3 2 0 0 2 2 2 0 RIO1 family HAD_2 PF13419.6 gi|21226414|ref|NP_632336.1| - 2.6e-14 53.7 0.0 1.2e-13 51.6 0.0 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|21226414|ref|NP_632336.1| - 4.4e-05 23.9 0.0 0.00023 21.5 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|21226414|ref|NP_632336.1| - 0.19 11.8 0.0 0.32 11.1 0.0 1.3 1 0 0 1 1 1 0 HAD-hyrolase-like HAD_2 PF13419.6 gi|21226415|ref|NP_632337.1| - 2.8e-16 60.1 0.0 4.2e-16 59.5 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|21226415|ref|NP_632337.1| - 1.2e-07 32.2 0.0 5.2e-07 30.2 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|21226415|ref|NP_632337.1| - 5.9e-06 26.2 0.0 9.6e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Put_Phosphatase PF06888.12 gi|21226415|ref|NP_632337.1| - 0.17 11.2 0.0 0.63 9.4 0.0 1.8 2 0 0 2 2 2 0 Putative Phosphatase tRNA-synt_1 PF00133.22 gi|21226416|ref|NP_632338.1| - 1e-133 446.7 1.8 1.5e-132 442.9 1.8 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|21226416|ref|NP_632338.1| - 1.4e-35 122.5 0.0 2.9e-35 121.5 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|21226416|ref|NP_632338.1| - 2.3e-22 79.3 0.0 3.3e-13 49.2 0.0 3.1 3 1 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|21226416|ref|NP_632338.1| - 4.9e-06 26.2 0.0 3.6e-05 23.4 0.0 2.2 2 1 1 3 3 3 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|21226416|ref|NP_632338.1| - 5.7e-06 25.9 0.0 0.025 13.9 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|21226416|ref|NP_632338.1| - 0.099 11.5 0.0 1.9 7.3 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class I (K) DUF5640 PF18692.1 gi|21226417|ref|NP_632339.1| - 0.017 15.1 0.1 0.066 13.2 0.1 2.0 1 0 0 1 1 1 0 Family of unknown function (DUF5640) T2SSF PF00482.23 gi|21226418|ref|NP_632340.1| - 5.2e-12 45.8 0.0 3.7e-06 26.9 0.0 3.7 5 0 0 5 5 5 2 Type II secretion system (T2SS), protein F Spore_III_AB PF09548.10 gi|21226418|ref|NP_632340.1| - 0.00022 21.4 0.1 0.21 11.7 0.2 2.3 2 0 0 2 2 2 2 Stage III sporulation protein AB (spore_III_AB) LMF1 PF06762.14 gi|21226418|ref|NP_632340.1| - 0.086 11.9 0.3 0.18 10.9 0.3 1.6 1 0 0 1 1 1 0 Lipase maturation factor T2SSE PF00437.20 gi|21226419|ref|NP_632341.1| - 7.8e-44 149.8 0.0 1.2e-43 149.2 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|21226419|ref|NP_632341.1| - 0.018 15.5 0.1 0.077 13.5 0.1 1.9 2 0 0 2 2 2 0 ABC transporter AAA_23 PF13476.6 gi|21226419|ref|NP_632341.1| - 0.071 13.6 0.1 0.2 12.1 0.1 1.7 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|21226419|ref|NP_632341.1| - 0.088 12.3 0.0 5.2 6.5 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region ATPase PF06745.13 gi|21226420|ref|NP_632342.1| - 2e-25 89.5 0.2 2.3e-25 89.3 0.2 1.0 1 0 0 1 1 1 1 KaiC PAXNEB PF05625.11 gi|21226420|ref|NP_632342.1| - 1.4e-10 40.9 0.9 6.8e-07 28.7 0.1 2.1 2 0 0 2 2 2 2 PAXNEB protein Rad51 PF08423.11 gi|21226420|ref|NP_632342.1| - 5.3e-07 29.2 0.2 1.4e-06 27.7 0.2 1.7 1 1 0 1 1 1 1 Rad51 DUF835 PF05763.12 gi|21226420|ref|NP_632342.1| - 7.3e-05 22.5 0.1 0.00013 21.8 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF835) AAA_25 PF13481.6 gi|21226420|ref|NP_632342.1| - 0.0008 19.0 0.0 0.0045 16.6 0.0 2.1 1 1 0 1 1 1 1 AAA domain Elong_Iki1 PF10483.9 gi|21226420|ref|NP_632342.1| - 0.00086 18.9 0.1 0.00096 18.7 0.1 1.2 1 0 0 1 1 1 1 Elongator subunit Iki1 AAA_22 PF13401.6 gi|21226420|ref|NP_632342.1| - 0.0019 18.5 0.0 0.003 17.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|21226420|ref|NP_632342.1| - 0.01 15.2 0.1 0.17 11.2 0.0 2.3 2 1 1 3 3 3 0 DnaB-like helicase C terminal domain Rsd_AlgQ PF04353.13 gi|21226420|ref|NP_632342.1| - 0.018 15.0 0.2 0.029 14.3 0.2 1.4 1 0 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AAA_24 PF13479.6 gi|21226420|ref|NP_632342.1| - 0.022 14.5 0.1 0.056 13.2 0.0 1.7 1 1 1 2 2 2 0 AAA domain RecA PF00154.21 gi|21226420|ref|NP_632342.1| - 0.024 14.1 0.1 0.11 12.0 0.0 1.8 2 0 0 2 2 2 0 recA bacterial DNA recombination protein AAA_14 PF13173.6 gi|21226420|ref|NP_632342.1| - 0.031 14.3 0.3 0.53 10.3 0.3 2.3 1 1 0 1 1 1 0 AAA domain Arch_flagellin PF01917.16 gi|21226421|ref|NP_632343.1| - 3e-05 24.3 1.9 4.6e-05 23.7 1.9 1.3 1 1 0 1 1 1 1 Archaebacterial flagellin TMEM240 PF15207.6 gi|21226421|ref|NP_632343.1| - 0.07 12.8 0.2 0.089 12.5 0.2 1.2 1 0 0 1 1 1 0 TMEM240 family GDE_N PF12439.8 gi|21226421|ref|NP_632343.1| - 0.11 11.9 0.1 0.16 11.3 0.1 1.2 1 0 0 1 1 1 0 Glycogen debranching enzyme N terminal Arch_flagellin PF01917.16 gi|21226422|ref|NP_632344.1| - 1.2e-06 28.8 0.0 1.5e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin Ribosomal_60s PF00428.19 gi|21226423|ref|NP_632345.1| - 0.022 15.3 1.4 0.061 13.9 1.4 1.7 1 0 0 1 1 1 0 60s Acidic ribosomal protein UCH PF00443.29 gi|21226423|ref|NP_632345.1| - 0.046 13.2 0.0 0.049 13.1 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase CLZ PF16526.5 gi|21226423|ref|NP_632345.1| - 0.81 10.1 0.1 0.81 10.1 0.1 3.0 3 1 1 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Arch_flagellin PF01917.16 gi|21226424|ref|NP_632346.1| - 8.8e-42 143.1 4.4 1e-41 142.9 4.4 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.16 gi|21226425|ref|NP_632347.1| - 4e-41 140.9 4.9 4.7e-41 140.7 4.9 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin CheR PF01739.18 gi|21226427|ref|NP_632349.1| - 1.4e-58 197.6 0.0 1.8e-58 197.3 0.0 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.15 gi|21226427|ref|NP_632349.1| - 1.9e-12 46.7 1.0 3.3e-12 45.9 1.0 1.4 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_25 PF13649.6 gi|21226427|ref|NP_632349.1| - 3.6e-06 27.6 0.0 4.3e-05 24.1 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21226427|ref|NP_632349.1| - 0.00041 21.1 0.0 0.0016 19.1 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21226427|ref|NP_632349.1| - 0.0016 19.1 0.0 0.0059 17.2 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21226427|ref|NP_632349.1| - 0.0023 17.8 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21226427|ref|NP_632349.1| - 0.0051 16.6 0.0 0.013 15.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain CheD PF03975.13 gi|21226428|ref|NP_632350.1| - 3.9e-30 104.2 0.2 5.5e-30 103.7 0.2 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.12 gi|21226429|ref|NP_632351.1| - 7e-24 83.4 0.2 8.5e-13 48.0 0.0 2.6 2 0 0 2 2 2 2 CheC-like family CheX PF13690.6 gi|21226429|ref|NP_632351.1| - 6.2e-13 48.8 0.3 1.9e-07 31.1 0.0 2.3 2 0 0 2 2 2 2 Chemotaxis phosphatase CheX CheW PF01584.19 gi|21226430|ref|NP_632352.1| - 7.9e-27 93.6 1.4 9.2e-26 90.1 0.5 2.6 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.26 gi|21226430|ref|NP_632352.1| - 2.6e-17 63.3 0.4 8.2e-17 61.7 0.2 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P2 PF07194.11 gi|21226430|ref|NP_632352.1| - 8e-16 57.9 0.5 8e-16 57.9 0.5 2.3 2 0 0 2 2 2 1 P2 response regulator binding domain Hpt PF01627.23 gi|21226430|ref|NP_632352.1| - 1.3e-15 57.4 0.0 4.1e-15 55.8 0.0 2.0 1 0 0 1 1 1 1 Hpt domain H-kinase_dim PF02895.14 gi|21226430|ref|NP_632352.1| - 1e-13 51.5 2.4 6e-13 49.0 0.9 2.6 2 0 0 2 2 2 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.6 gi|21226430|ref|NP_632352.1| - 0.0002 21.2 0.2 0.0014 18.5 0.2 2.2 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|21226430|ref|NP_632352.1| - 0.0019 18.0 1.0 0.0065 16.3 0.2 2.3 2 1 0 2 2 2 1 GHKL domain DUF5355 PF17306.2 gi|21226430|ref|NP_632352.1| - 0.02 13.9 0.2 0.044 12.8 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5355) DNA_PPF PF02916.15 gi|21226430|ref|NP_632352.1| - 9.9 6.6 8.8 0.3 11.5 0.3 2.7 3 0 0 3 3 3 0 DNA polymerase processivity factor CheB_methylest PF01339.17 gi|161485682|ref|NP_632353.2| - 1.2e-54 184.6 0.1 1.7e-54 184.1 0.1 1.2 1 0 0 1 1 1 1 CheB methylesterase Response_reg PF00072.24 gi|161485682|ref|NP_632353.2| - 2.2e-23 82.6 0.5 5.2e-23 81.4 0.5 1.6 1 0 0 1 1 1 1 Response regulator receiver domain MTD PF01993.18 gi|161485682|ref|NP_632353.2| - 0.0024 17.2 0.7 0.064 12.6 0.2 2.2 1 1 1 2 2 2 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase Lipase_GDSL PF00657.22 gi|161485682|ref|NP_632353.2| - 0.017 15.1 0.0 0.027 14.5 0.0 1.2 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase Response_reg PF00072.24 gi|21226432|ref|NP_632354.1| - 3e-30 104.7 1.1 3.4e-30 104.5 1.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CheF-arch PF04283.12 gi|21226433|ref|NP_632355.1| - 1.2e-15 57.9 0.1 2e-15 57.2 0.1 1.4 1 0 0 1 1 1 1 Chemotaxis signal transduction system protein F from archaea HTH_45 PF14947.6 gi|21226433|ref|NP_632355.1| - 0.00051 20.0 0.1 0.017 15.1 0.0 2.9 2 2 1 3 3 3 1 Winged helix-turn-helix Flavi_NS5 PF00972.20 gi|21226433|ref|NP_632355.1| - 0.027 12.6 0.0 0.027 12.6 0.0 1.1 1 0 0 1 1 1 0 Flavivirus RNA-directed RNA polymerase DNA_pol3_a_NI PF14480.6 gi|21226433|ref|NP_632355.1| - 0.066 13.2 1.7 0.12 12.3 0.9 1.8 2 0 0 2 2 2 0 DNA polymerase III polC-type N-terminus I CheW PF01584.19 gi|21226434|ref|NP_632356.1| - 3.3e-37 127.2 0.2 3.8e-37 127.0 0.2 1.0 1 0 0 1 1 1 1 CheW-like domain Phage_TAC_3 PF06896.11 gi|21226434|ref|NP_632356.1| - 0.0081 16.7 0.2 0.025 15.2 0.2 1.8 1 1 1 2 2 2 1 Phage tail assembly chaperone proteins, TAC MCPsignal PF00015.21 gi|21226435|ref|NP_632357.1| - 5.4e-42 143.5 42.6 1.7e-40 138.7 17.5 4.7 4 1 1 5 5 5 3 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_3 PF08447.12 gi|21226435|ref|NP_632357.1| - 4.6e-20 71.7 0.0 2.4e-19 69.4 0.0 2.3 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|21226435|ref|NP_632357.1| - 1.1e-15 57.7 0.0 3.1e-06 27.4 0.0 2.8 2 0 0 2 2 2 2 PAS domain PAS PF00989.25 gi|21226435|ref|NP_632357.1| - 9.9e-12 44.9 0.0 4.3e-06 26.7 0.0 3.2 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.10 gi|21226435|ref|NP_632357.1| - 1.2e-11 44.9 0.0 0.00014 22.1 0.0 2.5 2 0 0 2 2 2 2 PAS fold DUF948 PF06103.11 gi|21226435|ref|NP_632357.1| - 0.00039 20.6 35.7 0.21 11.9 5.5 6.1 4 2 2 6 6 5 3 Bacterial protein of unknown function (DUF948) HAMP PF00672.25 gi|21226435|ref|NP_632357.1| - 0.007 16.7 2.6 1.4 9.3 0.0 4.5 5 0 0 5 5 4 1 HAMP domain HisKA_2 PF07568.12 gi|21226435|ref|NP_632357.1| - 0.054 13.6 0.9 9.1 6.4 0.1 3.8 3 2 0 3 3 3 0 Histidine kinase BLOC1_2 PF10046.9 gi|21226435|ref|NP_632357.1| - 0.17 12.2 0.1 0.17 12.2 0.1 5.7 3 2 2 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FUSC PF04632.12 gi|21226435|ref|NP_632357.1| - 0.44 9.0 6.0 3.2 6.2 0.6 2.1 1 1 1 2 2 2 0 Fusaric acid resistance protein family DUF489 PF04356.12 gi|21226435|ref|NP_632357.1| - 0.47 10.5 8.6 0.34 10.9 4.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF489) APG17 PF04108.12 gi|21226435|ref|NP_632357.1| - 0.87 8.6 22.2 0.44 9.6 4.3 3.1 2 2 0 2 2 2 0 Autophagy protein Apg17 CdiA_C PF18451.1 gi|21226435|ref|NP_632357.1| - 1.1 9.5 6.3 1.1 9.5 0.1 3.6 3 0 0 3 3 3 0 Contact-dependent growth inhibition CdiA C-terminal domain Prominin PF05478.11 gi|21226435|ref|NP_632357.1| - 1.2 7.0 22.2 0.17 9.8 5.4 2.3 2 0 0 2 2 2 0 Prominin Laminin_II PF06009.12 gi|21226435|ref|NP_632357.1| - 1.4 9.0 37.5 0.38 10.8 5.9 5.7 3 2 2 5 5 5 0 Laminin Domain II Fib_alpha PF08702.10 gi|21226435|ref|NP_632357.1| - 2.3 8.4 27.3 0.26 11.5 4.6 4.9 3 2 2 5 5 5 0 Fibrinogen alpha/beta chain family Vps53_N PF04100.12 gi|21226435|ref|NP_632357.1| - 2.6 6.9 28.3 1.3 7.9 2.2 4.2 3 2 1 4 4 4 0 Vps53-like, N-terminal ING PF12998.7 gi|21226435|ref|NP_632357.1| - 2.9 8.5 16.0 38 5.0 6.2 4.7 2 2 2 4 4 4 0 Inhibitor of growth proteins N-terminal histone-binding Abi_C PF14355.6 gi|21226435|ref|NP_632357.1| - 3.4 7.8 10.0 1.2 9.3 0.3 4.2 5 0 0 5 5 5 0 Abortive infection C-terminus LOH1CR12 PF10158.9 gi|21226435|ref|NP_632357.1| - 3.9 7.5 14.4 3.6 7.6 1.4 4.0 3 2 2 5 5 5 0 Tumour suppressor protein Med30 PF11315.8 gi|21226435|ref|NP_632357.1| - 6.4 7.0 13.7 28 4.9 0.0 3.8 3 1 0 3 3 3 0 Mediator complex subunit 30 DrsE PF02635.15 gi|21226436|ref|NP_632358.1| - 2e-10 41.1 0.0 2.3e-10 40.9 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|21226436|ref|NP_632358.1| - 6.5e-09 35.9 0.1 6.6e-09 35.8 0.1 1.1 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family HMG-CoA_red PF00368.18 gi|21226437|ref|NP_632359.1| - 3.7e-138 460.5 2.3 4.3e-138 460.3 2.3 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase DUF1330 PF07045.11 gi|21226437|ref|NP_632359.1| - 0.12 12.8 0.0 0.3 11.4 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1330) DUF1699 PF08004.11 gi|21226438|ref|NP_632360.1| - 2.3e-61 205.2 3.0 2.6e-61 205.0 3.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|21226438|ref|NP_632360.1| - 0.03 14.6 0.0 0.045 14.1 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) PALP PF00291.25 gi|161485681|ref|NP_632361.2| - 2.4e-43 148.7 0.0 2.8e-43 148.4 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Phos_pyr_kin PF08543.12 gi|21226440|ref|NP_632362.1| - 5.2e-81 271.6 5.4 7.4e-81 271.1 5.4 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|21226440|ref|NP_632362.1| - 8.3e-63 210.9 0.5 1.4e-62 210.2 0.5 1.4 1 0 0 1 1 1 1 Thiamine-phosphate synthase PfkB PF00294.24 gi|21226440|ref|NP_632362.1| - 2.2e-10 40.3 1.5 3.5e-10 39.7 1.5 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HK PF02110.15 gi|21226440|ref|NP_632362.1| - 3.2e-05 23.4 0.9 6.7e-05 22.4 0.9 1.4 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family LSM PF01423.22 gi|21226441|ref|NP_632363.1| - 3.5e-21 74.7 0.1 3.8e-21 74.6 0.1 1.0 1 0 0 1 1 1 1 LSM domain Ribosomal_L37e PF01907.19 gi|21226442|ref|NP_632364.1| - 2e-20 72.7 15.1 2.2e-20 72.6 15.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e Zn_Tnp_IS91 PF14319.6 gi|21226442|ref|NP_632364.1| - 0.02 14.9 4.5 0.021 14.8 4.5 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain zn-ribbon_14 PF16503.5 gi|21226442|ref|NP_632364.1| - 0.41 10.2 0.2 0.41 10.2 0.2 2.5 3 0 0 3 3 3 0 Zinc-ribbon YhfH PF14149.6 gi|21226442|ref|NP_632364.1| - 0.45 10.5 5.3 0.8 9.7 0.3 2.3 1 1 1 2 2 2 0 YhfH-like protein Med16 PF11635.8 gi|21226442|ref|NP_632364.1| - 2.9 5.7 6.6 2.8 5.8 6.6 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 GATase_7 PF13537.6 gi|21226443|ref|NP_632365.1| - 6.1e-20 71.4 0.0 1e-19 70.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|21226443|ref|NP_632365.1| - 6.8e-18 65.2 0.0 1.9e-17 63.7 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|21226443|ref|NP_632365.1| - 3.3e-08 32.7 0.0 5.9e-08 31.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Pribosyltran PF00156.27 gi|21226443|ref|NP_632365.1| - 9.6e-06 25.2 0.1 1.8e-05 24.3 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPF0047 PF01894.17 gi|21226444|ref|NP_632366.1| - 1.6e-40 137.8 0.0 1.8e-40 137.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF2113 PF09886.9 gi|21226444|ref|NP_632366.1| - 0.076 12.4 0.0 0.092 12.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2113) MatE PF01554.18 gi|21226446|ref|NP_632368.1| - 9.7e-59 197.6 40.1 1.1e-32 112.9 13.8 2.8 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|21226446|ref|NP_632368.1| - 9.9e-12 45.1 30.3 6.6e-11 42.5 15.8 4.6 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain DUF1177 PF06675.11 gi|21226446|ref|NP_632368.1| - 0.091 11.6 0.7 0.14 10.9 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1177) TrmB PF01978.19 gi|21226447|ref|NP_632369.1| - 4.8e-22 77.6 0.1 1.7e-21 75.9 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 gi|21226447|ref|NP_632369.1| - 0.00022 21.5 0.0 0.00027 21.3 0.0 1.1 1 0 0 1 1 1 1 Penicillinase repressor MarR_2 PF12802.7 gi|21226447|ref|NP_632369.1| - 0.0011 18.8 0.0 0.0023 17.8 0.0 1.6 2 0 0 2 2 2 1 MarR family Rrf2 PF02082.20 gi|21226447|ref|NP_632369.1| - 0.0028 18.0 0.0 0.0049 17.2 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_9 PF08221.11 gi|21226447|ref|NP_632369.1| - 0.011 15.8 0.0 0.017 15.2 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain PadR PF03551.14 gi|21226447|ref|NP_632369.1| - 0.022 14.7 0.3 0.21 11.6 0.0 2.4 2 1 1 3 3 3 0 Transcriptional regulator PadR-like family YflT PF11181.8 gi|21226447|ref|NP_632369.1| - 0.068 13.7 0.1 0.53 10.8 0.0 2.1 2 0 0 2 2 2 0 Heat induced stress protein YflT HTH_34 PF13601.6 gi|21226447|ref|NP_632369.1| - 0.092 12.9 0.0 0.21 11.8 0.0 1.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_46 PF15977.5 gi|21226447|ref|NP_632369.1| - 0.1 12.6 0.0 0.24 11.4 0.0 1.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA binding HTH_IclR PF09339.10 gi|21226447|ref|NP_632369.1| - 0.16 11.8 0.0 0.43 10.4 0.0 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain MarR PF01047.22 gi|21226448|ref|NP_632370.1| - 1.1e-10 41.2 0.0 2.2e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21226448|ref|NP_632370.1| - 2.9e-08 34.1 0.5 2.8e-07 30.9 0.1 2.3 2 1 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|21226448|ref|NP_632370.1| - 6.6e-05 22.7 0.0 0.00011 22.0 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|21226448|ref|NP_632370.1| - 0.00067 19.8 0.0 0.0016 18.6 0.0 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain RPAP1_N PF08621.10 gi|21226448|ref|NP_632370.1| - 0.011 15.5 0.7 0.027 14.2 0.7 1.8 1 0 0 1 1 1 0 RPAP1-like, N-terminal Cytochrom_B562 PF07361.11 gi|21226448|ref|NP_632370.1| - 0.015 15.9 0.0 0.024 15.3 0.0 1.5 1 0 0 1 1 1 0 Cytochrome b562 HxlR PF01638.17 gi|21226448|ref|NP_632370.1| - 0.032 14.1 0.1 0.063 13.1 0.1 1.6 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|21226448|ref|NP_632370.1| - 0.046 13.7 0.0 0.11 12.5 0.0 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix Glu-tRNAGln PF02686.15 gi|21226448|ref|NP_632370.1| - 0.064 13.6 0.2 0.14 12.5 0.2 1.6 1 0 0 1 1 1 0 Glu-tRNAGln amidotransferase C subunit MatE PF01554.18 gi|21226450|ref|NP_632372.1| - 1.3e-48 164.7 43.7 1.2e-26 93.3 9.7 3.2 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.6 gi|21226450|ref|NP_632372.1| - 4.6e-11 43.0 28.6 1e-10 41.9 12.6 4.6 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain TraS PF10624.9 gi|21226450|ref|NP_632372.1| - 0.055 13.4 1.9 0.16 11.9 1.9 1.9 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS Rhodanese PF00581.20 gi|21226452|ref|NP_632374.1| - 3.1e-38 130.6 0.0 2.6e-18 66.5 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain DUF442 PF04273.13 gi|21226452|ref|NP_632374.1| - 1.4e-05 25.1 0.0 0.23 11.5 0.0 2.5 2 0 0 2 2 2 2 Putative phosphatase (DUF442) ThiC-associated PF13667.6 gi|21226452|ref|NP_632374.1| - 0.16 11.8 0.0 4.2 7.2 0.0 2.2 2 0 0 2 2 2 0 ThiC-associated domain DSPc PF00782.20 gi|21226452|ref|NP_632374.1| - 0.23 11.3 0.0 14 5.5 0.0 2.2 2 0 0 2 2 2 0 Dual specificity phosphatase, catalytic domain Spore_GerQ PF09671.10 gi|21226455|ref|NP_632377.1| - 0.29 11.2 2.9 9.8 6.3 0.3 2.9 2 1 1 3 3 3 0 Spore coat protein (Spore_GerQ) Y1_Tnp PF01797.16 gi|21226457|ref|NP_632379.1| - 1.1e-35 122.3 1.5 1.4e-35 122.0 1.5 1.1 1 0 0 1 1 1 1 Transposase IS200 like Abhydrolase_6 PF12697.7 gi|21226458|ref|NP_632380.1| - 0.0078 16.8 0.0 0.013 16.1 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|21226458|ref|NP_632380.1| - 0.009 15.3 0.0 0.075 12.3 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 DUF915 PF06028.11 gi|21226458|ref|NP_632380.1| - 0.068 12.5 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) ELFV_dehydrog PF00208.21 gi|21226459|ref|NP_632381.1| - 4.5e-58 196.8 0.0 5.6e-58 196.5 0.0 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|21226459|ref|NP_632381.1| - 5.1e-20 71.7 0.0 8.6e-20 70.9 0.0 1.3 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|21226459|ref|NP_632381.1| - 0.014 14.8 0.1 0.026 13.9 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Bac_GDH PF05088.12 gi|21226459|ref|NP_632381.1| - 0.036 11.6 0.0 0.053 11.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase Gp_dh_N PF00044.24 gi|21226459|ref|NP_632381.1| - 0.05 13.9 0.1 0.21 12.0 0.0 2.0 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|21226459|ref|NP_632381.1| - 0.053 13.6 0.1 0.1 12.7 0.1 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KH_7 PF17214.3 gi|21226459|ref|NP_632381.1| - 0.062 13.3 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 KH domain NAD_binding_7 PF13241.6 gi|21226459|ref|NP_632381.1| - 0.15 12.5 0.1 0.36 11.3 0.1 1.8 1 1 0 1 1 1 0 Putative NAD(P)-binding Succ_CoA_lig PF13607.6 gi|21226460|ref|NP_632382.1| - 8.4e-49 164.9 1.0 4.2e-48 162.6 0.7 2.2 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|21226460|ref|NP_632382.1| - 7.2e-22 78.1 0.0 2.4e-20 73.2 0.0 3.0 3 1 0 3 3 3 1 CoA binding domain CoA_binding PF02629.19 gi|21226460|ref|NP_632382.1| - 4e-11 43.4 0.0 1.8e-09 38.2 0.0 3.2 4 0 0 4 4 4 1 CoA binding domain HEM4 PF02602.15 gi|21226460|ref|NP_632382.1| - 0.016 14.6 0.2 0.24 10.7 0.1 2.7 2 1 1 3 3 3 0 Uroporphyrinogen-III synthase HemD HxlR PF01638.17 gi|21226461|ref|NP_632383.1| - 3.1e-20 71.8 0.3 3.7e-20 71.6 0.3 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|21226461|ref|NP_632383.1| - 0.02 14.8 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DUF2513 PF10711.9 gi|21226461|ref|NP_632383.1| - 0.04 14.2 0.0 0.055 13.8 0.0 1.2 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) DUF4423 PF14394.6 gi|21226461|ref|NP_632383.1| - 0.049 13.3 0.0 0.064 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_45 PF14947.6 gi|21226461|ref|NP_632383.1| - 0.093 12.7 0.1 0.18 11.8 0.1 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix Replic_Relax PF13814.6 gi|21226461|ref|NP_632383.1| - 0.17 11.9 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation NIR_SIR PF01077.22 gi|21226462|ref|NP_632384.1| - 1.9e-28 99.0 0.0 1.1e-27 96.5 0.0 1.9 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|21226462|ref|NP_632384.1| - 8.7e-17 60.7 0.0 1.9e-16 59.7 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain HxlR PF01638.17 gi|21226463|ref|NP_632385.1| - 6e-24 83.7 0.4 7.3e-24 83.4 0.4 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|21226463|ref|NP_632385.1| - 0.00048 20.0 0.0 0.00078 19.3 0.0 1.5 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|21226463|ref|NP_632385.1| - 0.0013 18.9 0.1 0.0017 18.5 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|21226463|ref|NP_632385.1| - 0.005 16.8 0.1 0.0089 16.0 0.1 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DUF4423 PF14394.6 gi|21226463|ref|NP_632385.1| - 0.021 14.5 0.1 0.025 14.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF2513 PF10711.9 gi|21226463|ref|NP_632385.1| - 0.046 14.0 0.2 0.064 13.5 0.2 1.2 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) Rrf2 PF02082.20 gi|21226463|ref|NP_632385.1| - 0.13 12.7 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator DUF438 PF04282.13 gi|21226463|ref|NP_632385.1| - 0.13 12.3 0.6 0.21 11.5 0.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF438) Replic_Relax PF13814.6 gi|21226463|ref|NP_632385.1| - 0.13 12.3 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation NIR_SIR PF01077.22 gi|21226464|ref|NP_632386.1| - 8.8e-31 106.6 0.0 1.7e-30 105.6 0.0 1.5 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|21226464|ref|NP_632386.1| - 1.4e-13 50.5 0.0 2.8e-13 49.5 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Cupin_2 PF07883.11 gi|21226465|ref|NP_632387.1| - 2.9e-14 52.5 0.1 3.9e-14 52.1 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|21226465|ref|NP_632387.1| - 0.017 15.0 0.0 0.023 14.6 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain DUF4585 PF15232.6 gi|21226465|ref|NP_632387.1| - 0.022 14.8 0.0 0.07 13.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4585) MannoseP_isomer PF01050.18 gi|21226465|ref|NP_632387.1| - 0.06 13.2 0.0 0.072 13.0 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Pirin_C PF05726.13 gi|21226465|ref|NP_632387.1| - 0.12 12.7 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Pirin C-terminal cupin domain CGGC PF08821.11 gi|21226466|ref|NP_632388.1| - 6.4e-37 126.0 1.3 7.2e-37 125.8 1.3 1.0 1 0 0 1 1 1 1 CGGC domain Glyco_transf_4 PF13439.6 gi|21226466|ref|NP_632388.1| - 0.069 13.2 0.0 0.069 13.2 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 zf-C2H2 PF00096.26 gi|21226466|ref|NP_632388.1| - 0.46 11.0 3.1 3.7 8.2 0.2 2.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type Fer4_21 PF14697.6 gi|21226468|ref|NP_632390.1| - 7.1e-09 35.7 7.8 7.1e-09 35.7 7.8 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21226468|ref|NP_632390.1| - 6.3e-08 32.4 9.3 4e-06 26.7 4.0 3.6 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4 PF00037.27 gi|21226468|ref|NP_632390.1| - 1e-07 31.4 11.9 1e-05 25.1 5.1 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21226468|ref|NP_632390.1| - 3.2e-07 30.8 11.8 0.0007 20.1 1.0 2.9 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21226468|ref|NP_632390.1| - 3.5e-07 30.3 18.8 1.9e-05 24.7 7.5 3.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21226468|ref|NP_632390.1| - 1.8e-06 28.8 13.9 0.0012 19.7 3.9 2.7 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|21226468|ref|NP_632390.1| - 6.2e-06 26.2 9.1 6.2e-06 26.2 9.1 2.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21226468|ref|NP_632390.1| - 3.4e-05 23.7 13.5 9.9e-05 22.2 2.0 4.0 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_15 PF13459.6 gi|21226468|ref|NP_632390.1| - 0.00031 21.4 11.3 0.0021 18.7 1.6 2.8 1 1 2 3 3 3 2 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|21226468|ref|NP_632390.1| - 0.0042 17.6 10.7 0.12 13.0 0.6 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21226468|ref|NP_632390.1| - 0.051 14.4 1.8 0.051 14.4 1.8 3.2 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21226468|ref|NP_632390.1| - 0.088 13.4 17.6 0.1 13.1 4.2 3.9 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21226468|ref|NP_632390.1| - 4 8.0 18.1 8.6e+02 0.5 18.1 3.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21226468|ref|NP_632390.1| - 4.3 8.0 12.5 0.38 11.3 3.0 2.7 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_19 PF06902.11 gi|21226468|ref|NP_632390.1| - 5.5 7.2 10.3 11 6.2 6.3 3.2 2 1 0 2 2 1 0 Divergent 4Fe-4S mono-cluster Hemerythrin PF01814.23 gi|21226469|ref|NP_632391.1| - 3.8e-23 82.5 0.9 3.8e-23 82.5 0.9 1.9 2 0 0 2 2 2 1 Hemerythrin HHE cation binding domain CMD PF02627.20 gi|21226470|ref|NP_632392.1| - 2.8e-17 62.6 0.1 3.4e-17 62.3 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SapB_1 PF05184.15 gi|21226470|ref|NP_632392.1| - 0.0079 16.2 0.2 0.017 15.2 0.2 1.5 1 0 0 1 1 1 1 Saposin-like type B, region 1 TrmB PF01978.19 gi|21226471|ref|NP_632393.1| - 1.3e-23 82.6 0.3 2.8e-23 81.6 0.3 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|21226471|ref|NP_632393.1| - 2.5e-05 23.6 0.0 3.3e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB PLDc_2 PF13091.6 gi|21226471|ref|NP_632393.1| - 0.0065 16.4 0.0 0.055 13.4 0.0 2.1 1 1 0 1 1 1 1 PLD-like domain PDT PF00800.18 gi|21226472|ref|NP_632394.1| - 3e-54 183.6 0.0 4e-54 183.2 0.0 1.2 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|21226472|ref|NP_632394.1| - 3.7e-11 42.6 0.0 2.1e-10 40.2 0.0 2.1 2 0 0 2 2 2 1 ACT domain AAA_3 PF07726.11 gi|21226474|ref|NP_632396.1| - 7.4e-63 210.2 0.1 1.2e-62 209.5 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|21226474|ref|NP_632396.1| - 3.4e-19 68.5 0.0 5.4e-19 67.8 0.0 1.3 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|21226474|ref|NP_632396.1| - 7.3e-13 48.7 0.0 1.3e-12 47.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|21226474|ref|NP_632396.1| - 1.1e-06 29.2 0.0 1.8e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|21226474|ref|NP_632396.1| - 1.2e-05 24.5 0.0 2.4e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 MCM P-loop domain RuvB_N PF05496.12 gi|21226474|ref|NP_632396.1| - 0.00062 19.6 0.0 0.009 15.8 0.0 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 gi|21226474|ref|NP_632396.1| - 0.00092 18.9 0.0 0.0029 17.3 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.14 gi|21226474|ref|NP_632396.1| - 0.039 14.1 0.0 0.075 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_19 PF13245.6 gi|21226474|ref|NP_632396.1| - 0.064 13.6 0.0 3.9 7.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain DUF58 PF01882.18 gi|21226475|ref|NP_632397.1| - 2.9e-24 85.1 0.1 8.9e-24 83.6 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|21226475|ref|NP_632397.1| - 2.6e-08 34.5 0.1 1.2e-07 32.3 0.0 2.0 1 1 1 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|21226475|ref|NP_632397.1| - 1.5e-05 24.5 0.0 2.8e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.28 gi|21226475|ref|NP_632397.1| - 0.00029 21.1 0.0 0.00058 20.2 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain PaaX PF07848.12 gi|21226475|ref|NP_632397.1| - 0.022 15.0 0.0 0.043 14.1 0.0 1.4 1 0 0 1 1 1 0 PaaX-like protein DBD_HTH PF18430.1 gi|21226475|ref|NP_632397.1| - 0.028 14.2 0.4 1.5 8.6 0.0 2.9 3 0 0 3 3 3 0 Putative DNA-binding domain BatA PF07584.11 gi|21226476|ref|NP_632398.1| - 2.4e-14 53.4 6.4 2.4e-14 53.4 6.4 1.7 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal DUF2194 PF09960.9 gi|21226476|ref|NP_632398.1| - 0.00024 19.6 0.2 0.00043 18.8 0.0 1.3 2 0 0 2 2 2 1 Uncharacterised protein conserved in bacteria (DUF2194) VWA_2 PF13519.6 gi|21226476|ref|NP_632398.1| - 0.001 19.7 0.2 0.0043 17.7 0.2 2.0 1 1 0 1 1 1 1 von Willebrand factor type A domain ThuA PF06283.11 gi|21226476|ref|NP_632398.1| - 0.0038 17.5 0.0 0.008 16.4 0.0 1.4 1 0 0 1 1 1 1 Trehalose utilisation ABC_transp_aux PF09822.9 gi|21226476|ref|NP_632398.1| - 0.0049 16.4 0.0 0.012 15.1 0.0 1.6 1 1 0 1 1 1 1 ABC-type uncharacterized transport system Glyco_hydro_42M PF08532.10 gi|21226476|ref|NP_632398.1| - 0.14 11.7 0.0 0.33 10.4 0.0 1.6 1 0 0 1 1 1 0 Beta-galactosidase trimerisation domain VWA PF00092.28 gi|21226477|ref|NP_632399.1| - 1.5e-10 41.6 4.2 4.6e-06 27.0 0.2 2.9 3 0 0 3 3 3 2 von Willebrand factor type A domain GATase1_like PF07090.11 gi|21226477|ref|NP_632399.1| - 2e-10 40.6 0.0 0.00016 21.2 0.0 2.4 2 0 0 2 2 2 2 Putative glutamine amidotransferase DUF4350 PF14258.6 gi|21226477|ref|NP_632399.1| - 0.003 17.9 0.6 0.92 10.0 0.0 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4350) ABC_transp_aux PF09822.9 gi|21226477|ref|NP_632399.1| - 0.02 14.4 0.6 0.068 12.6 0.3 2.0 2 0 0 2 2 2 0 ABC-type uncharacterized transport system LBP_M PF17385.2 gi|21226477|ref|NP_632399.1| - 0.023 14.2 0.0 5.3 6.5 0.0 3.5 3 1 0 3 3 3 0 Lacto-N-biose phosphorylase central domain Usp PF00582.26 gi|21226477|ref|NP_632399.1| - 0.031 14.8 0.0 0.42 11.1 0.0 2.5 2 0 0 2 2 2 0 Universal stress protein family Cytadhesin_P30 PF07271.11 gi|21226477|ref|NP_632399.1| - 0.06 12.9 0.1 0.6 9.6 0.0 2.1 2 0 0 2 2 2 0 Cytadhesin P30/P32 DUF4159 PF13709.6 gi|21226477|ref|NP_632399.1| - 0.078 12.4 0.0 0.32 10.4 0.0 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4159) SNARE_assoc PF09335.11 gi|21226478|ref|NP_632400.1| - 0.025 15.0 0.8 0.025 15.0 0.8 1.8 2 0 0 2 2 2 0 SNARE associated Golgi protein DUF2061 PF09834.9 gi|21226478|ref|NP_632400.1| - 0.48 11.0 5.8 0.32 11.5 1.3 2.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2061) LPG_synthase_TM PF03706.13 gi|21226479|ref|NP_632401.1| - 5.3e-50 170.7 21.5 6e-50 170.5 21.5 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region NTP_transferase PF00483.23 gi|21226480|ref|NP_632402.1| - 4.9e-49 167.1 0.0 6.6e-49 166.7 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|21226480|ref|NP_632402.1| - 4.4e-20 70.6 26.2 1.8e-08 33.8 1.5 5.2 2 2 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21226480|ref|NP_632402.1| - 1.1e-09 37.8 27.1 0.00067 19.3 8.6 4.6 2 2 2 4 4 4 4 Hexapeptide repeat of succinyl-transferase NTP_transf_3 PF12804.7 gi|21226480|ref|NP_632402.1| - 7.9e-09 36.1 0.0 1.2e-08 35.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 gi|21226480|ref|NP_632402.1| - 0.0057 15.6 2.1 0.019 13.9 0.3 2.0 1 1 1 2 2 2 1 L-fucokinase Bactofilin PF04519.13 gi|21226480|ref|NP_632402.1| - 0.47 10.8 6.3 1 9.7 1.5 2.4 1 1 1 2 2 2 0 Polymer-forming cytoskeletal DUF4954 PF16314.5 gi|21226480|ref|NP_632402.1| - 1.2 7.2 5.1 2.7 6.0 5.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4954) tRNA_anti-codon PF01336.25 gi|21226481|ref|NP_632403.1| - 1.8e-07 31.1 0.0 2.3e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain CsoSCA PF08936.10 gi|21226481|ref|NP_632403.1| - 0.12 11.0 0.0 0.14 10.8 0.0 1.0 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase FKBP_C PF00254.28 gi|21226482|ref|NP_632404.1| - 1.9e-22 79.4 0.0 2.8e-22 78.8 0.0 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.28 gi|21226483|ref|NP_632405.1| - 1e-27 96.3 0.4 1.6e-27 95.7 0.4 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.28 gi|21226484|ref|NP_632406.1| - 1.2e-28 99.2 0.7 1.6e-28 98.8 0.7 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase YajC PF02699.15 gi|21226484|ref|NP_632406.1| - 0.11 12.4 0.3 0.22 11.4 0.3 1.5 1 0 0 1 1 1 0 Preprotein translocase subunit DUF1648 PF07853.11 gi|21226485|ref|NP_632407.1| - 6.8e-20 70.5 0.5 6.8e-20 70.5 0.5 3.5 4 0 0 4 4 4 1 Protein of unknown function (DUF1648) SdpI PF13630.6 gi|21226485|ref|NP_632407.1| - 9.2e-20 70.6 2.0 9.2e-20 70.6 2.0 3.1 2 1 0 2 2 2 1 SdpI/YhfL protein family TMEM18 PF14770.6 gi|21226485|ref|NP_632407.1| - 3.8 7.5 8.7 6.4 6.8 0.2 3.0 3 1 0 3 3 3 0 Transmembrane protein 18 DUF3671 PF12420.8 gi|21226485|ref|NP_632407.1| - 3.9 7.6 12.1 0.6 10.2 0.5 2.7 1 1 2 3 3 3 0 Protein of unknown function DUF2208 PF09973.9 gi|21226485|ref|NP_632407.1| - 4.4 6.9 13.0 1.6 8.3 1.7 2.8 2 1 1 3 3 3 0 Predicted membrane protein (DUF2208) DUF2207 PF09972.9 gi|21226485|ref|NP_632407.1| - 8.3 5.0 12.4 0.91 8.2 0.3 2.4 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) NosD PF05048.13 gi|21226486|ref|NP_632408.1| - 2.2e-41 141.7 29.2 2.2e-41 141.7 29.2 3.4 2 2 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21226486|ref|NP_632408.1| - 1.9e-18 66.8 26.8 1.9e-18 66.8 26.8 2.8 2 0 0 2 2 2 1 Right handed beta helix region PKD PF00801.20 gi|21226486|ref|NP_632408.1| - 4.7e-10 39.2 18.2 2.2e-06 27.4 2.4 3.3 4 0 0 4 4 4 2 PKD domain Pectinesterase PF01095.19 gi|21226486|ref|NP_632408.1| - 0.0012 17.7 0.8 0.0023 16.7 0.2 1.8 2 0 0 2 2 2 1 Pectinesterase PKD_3 PF16820.5 gi|21226486|ref|NP_632408.1| - 0.042 13.6 1.4 0.73 9.6 0.1 2.5 2 0 0 2 2 2 0 PKD-like domain SMC_ScpB PF04079.16 gi|21226487|ref|NP_632409.1| - 0.002 17.8 0.0 0.0024 17.5 0.0 1.2 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB PadR PF03551.14 gi|21226487|ref|NP_632409.1| - 0.13 12.2 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Peptidase_M42 PF05343.14 gi|21226488|ref|NP_632410.1| - 0.023 13.8 0.0 0.027 13.5 0.0 1.0 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase PadR PF03551.14 gi|21226488|ref|NP_632410.1| - 0.034 14.1 0.0 0.067 13.2 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family MRP-L20 PF12824.7 gi|21226488|ref|NP_632410.1| - 0.095 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 Pyr_redox_2 PF07992.14 gi|21226489|ref|NP_632411.1| - 1.8e-15 57.0 0.0 4.3e-08 32.7 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FlpD PF02662.16 gi|21226489|ref|NP_632411.1| - 2.3e-14 53.5 0.9 9.5e-13 48.2 0.0 3.6 4 1 1 5 5 4 1 Methyl-viologen-reducing hydrogenase, delta subunit Fer4 PF00037.27 gi|21226489|ref|NP_632411.1| - 1.7e-12 46.6 35.0 0.00029 20.5 3.9 5.7 5 1 0 5 5 5 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21226489|ref|NP_632411.1| - 5.5e-12 45.0 29.2 0.00093 19.2 3.5 5.0 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21226489|ref|NP_632411.1| - 2.9e-11 43.8 28.5 0.00059 20.4 1.3 5.2 4 1 1 5 5 5 4 4Fe-4S dicluster domain DAO PF01266.24 gi|21226489|ref|NP_632411.1| - 9.2e-10 38.6 0.0 8e-07 29.0 0.0 2.5 2 0 0 2 2 2 2 FAD dependent oxidoreductase Fer4_6 PF12837.7 gi|21226489|ref|NP_632411.1| - 1.8e-09 37.3 38.2 0.00026 20.9 1.3 5.2 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21226489|ref|NP_632411.1| - 5.7e-09 36.0 30.9 3e-05 24.0 6.0 4.3 4 1 1 5 5 4 3 4Fe-4S dicluster domain FAD_oxidored PF12831.7 gi|21226489|ref|NP_632411.1| - 1.5e-08 34.4 0.0 2.2e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|21226489|ref|NP_632411.1| - 5.1e-07 29.1 0.9 9.6e-07 28.2 0.9 1.4 1 0 0 1 1 1 1 FAD binding domain Fer4_16 PF13484.6 gi|21226489|ref|NP_632411.1| - 8.9e-07 29.8 24.3 0.034 15.1 0.1 5.1 5 0 0 5 5 4 3 4Fe-4S double cluster binding domain NAD_binding_8 PF13450.6 gi|21226489|ref|NP_632411.1| - 4.1e-06 26.9 0.1 1e-05 25.7 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|21226489|ref|NP_632411.1| - 1.3e-05 24.5 0.1 2.4e-05 23.6 0.1 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Fer4_9 PF13187.6 gi|21226489|ref|NP_632411.1| - 2.1e-05 24.6 6.2 2.1e-05 24.6 6.2 4.4 3 2 2 5 5 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21226489|ref|NP_632411.1| - 2.7e-05 24.2 36.4 0.0088 16.2 5.4 4.4 4 1 0 4 4 3 3 4Fe-4S dicluster domain Thi4 PF01946.17 gi|21226489|ref|NP_632411.1| - 8e-05 22.0 0.1 0.00015 21.1 0.1 1.4 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 gi|21226489|ref|NP_632411.1| - 0.00032 20.1 0.5 0.00052 19.4 0.5 1.3 1 0 0 1 1 1 1 FAD binding domain Fer4_17 PF13534.6 gi|21226489|ref|NP_632411.1| - 0.00079 19.9 30.7 0.036 14.6 2.9 5.4 5 2 0 5 5 4 3 4Fe-4S dicluster domain HI0933_like PF03486.14 gi|21226489|ref|NP_632411.1| - 0.0019 17.0 0.9 0.0035 16.1 0.9 1.4 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox PF00070.27 gi|21226489|ref|NP_632411.1| - 0.003 18.1 0.3 0.12 13.0 0.1 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase B12-binding PF02310.19 gi|21226489|ref|NP_632411.1| - 0.0037 17.3 0.0 0.43 10.6 0.0 2.7 3 0 0 3 3 2 1 B12 binding domain Pyr_redox_3 PF13738.6 gi|21226489|ref|NP_632411.1| - 0.0044 16.3 0.3 0.06 12.6 0.2 2.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_8 PF13183.6 gi|21226489|ref|NP_632411.1| - 0.026 15.0 2.5 0.026 15.0 2.5 5.1 3 3 3 6 6 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21226489|ref|NP_632411.1| - 0.058 14.2 17.8 0.62 10.9 1.0 4.8 4 0 0 4 4 4 0 4Fe-4S dicluster domain Amino_oxidase PF01593.24 gi|21226489|ref|NP_632411.1| - 0.066 12.5 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase AlaDh_PNT_C PF01262.21 gi|21226489|ref|NP_632411.1| - 0.091 12.0 0.1 0.23 10.8 0.1 1.6 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Fer4_18 PF13746.6 gi|21226489|ref|NP_632411.1| - 5.4 7.2 19.1 0.15 12.3 0.8 3.7 3 1 0 3 3 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21226490|ref|NP_632412.1| - 1.1e-10 41.7 6.8 2.4e-10 40.7 6.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21226490|ref|NP_632412.1| - 1.4e-08 34.7 5.8 2.9e-08 33.7 5.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21226490|ref|NP_632412.1| - 3.7e-08 33.4 8.1 7.8e-08 32.4 8.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226490|ref|NP_632412.1| - 1.1e-07 32.3 9.4 2.3e-07 31.3 9.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21226490|ref|NP_632412.1| - 1.8e-07 31.6 8.4 3.7e-07 30.6 8.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21226490|ref|NP_632412.1| - 2.6e-05 24.4 2.0 2.6e-05 24.4 2.0 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21226490|ref|NP_632412.1| - 0.00018 21.4 3.2 0.00018 21.4 3.2 2.8 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21226490|ref|NP_632412.1| - 0.00046 20.1 2.8 0.00046 20.1 2.8 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4 PF00037.27 gi|21226490|ref|NP_632412.1| - 0.00052 19.7 12.3 0.0014 18.4 3.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21226490|ref|NP_632412.1| - 0.0014 19.5 14.4 0.0024 18.8 11.6 2.6 2 1 0 2 2 1 1 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 gi|21226490|ref|NP_632412.1| - 0.019 15.8 7.1 0.057 14.3 0.5 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21226490|ref|NP_632412.1| - 0.021 14.9 9.6 0.15 12.2 9.6 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21226490|ref|NP_632412.1| - 0.15 12.6 0.7 0.15 12.6 0.7 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Lar_restr_allev PF14354.6 gi|21226490|ref|NP_632412.1| - 3.2 8.2 10.5 7 7.1 0.9 2.9 2 1 1 3 3 3 0 Restriction alleviation protein Lar Fer4_3 PF12798.7 gi|21226490|ref|NP_632412.1| - 4.7 8.4 16.7 0.69 11.0 5.4 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain CCG PF02754.16 gi|21226491|ref|NP_632413.1| - 7.7e-17 61.3 8.9 2.6e-08 33.9 2.8 2.7 3 0 0 3 3 3 2 Cysteine-rich domain Lipocalin PF00061.23 gi|21226491|ref|NP_632413.1| - 0.12 12.6 0.0 0.95 9.7 0.0 2.1 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family Lactonase PF10282.9 gi|21226492|ref|NP_632414.1| - 8.8e-17 61.4 7.3 3.1e-05 23.4 0.2 4.1 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|21226492|ref|NP_632414.1| - 8.5e-13 47.6 8.1 2.4e-06 26.4 1.2 3.1 1 1 1 3 3 3 3 Cytochrome D1 heme domain NHL PF01436.21 gi|21226492|ref|NP_632414.1| - 6.3e-10 38.6 23.9 0.0069 16.4 0.3 8.1 8 0 0 8 8 8 3 NHL repeat SGL PF08450.12 gi|21226492|ref|NP_632414.1| - 1.1e-08 35.0 11.7 0.00064 19.4 6.2 4.2 1 1 3 4 4 4 4 SMP-30/Gluconolactonase/LRE-like region PD40 PF07676.12 gi|21226492|ref|NP_632414.1| - 1.1e-05 25.2 0.1 3.4 7.7 0.0 4.6 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat Arylesterase PF01731.20 gi|21226492|ref|NP_632414.1| - 0.00028 21.0 4.2 0.65 10.2 0.1 4.8 3 3 2 5 5 5 1 Arylesterase SBP56 PF05694.11 gi|21226492|ref|NP_632414.1| - 0.0087 14.9 0.4 9.1 5.0 0.0 3.7 1 1 0 3 3 3 1 56kDa selenium binding protein (SBP56) DUF4915 PF16261.5 gi|21226492|ref|NP_632414.1| - 0.022 14.0 0.1 2.8 7.1 0.0 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4915) Arm-DNA-bind_3 PF13356.6 gi|21226492|ref|NP_632414.1| - 0.03 14.7 0.1 25 5.3 0.0 3.5 2 1 0 2 2 2 0 Arm DNA-binding domain DUF1513 PF07433.11 gi|21226492|ref|NP_632414.1| - 0.083 12.0 2.4 1.5 7.9 0.1 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1513) PQQ PF01011.21 gi|21226492|ref|NP_632414.1| - 0.49 10.4 19.1 1.8 8.7 0.1 5.9 7 0 0 7 7 7 0 PQQ enzyme repeat PCC_BT PF18140.1 gi|21226492|ref|NP_632414.1| - 0.61 10.4 9.6 6.1 7.2 0.3 3.3 1 1 2 3 3 3 0 Propionyl-coenzyme A carboxylase BT domain LVIVD PF08309.11 gi|21226493|ref|NP_632415.1| - 4.5e-255 822.8 122.7 1e-22 79.2 0.4 14.2 12 2 2 14 14 14 14 LVIVD repeat Beta_propel PF09826.9 gi|21226493|ref|NP_632415.1| - 5.4e-18 65.1 13.5 0.0055 15.6 0.3 9.0 1 1 4 6 6 6 5 Beta propeller domain PKD PF00801.20 gi|21226493|ref|NP_632415.1| - 1.2e-10 41.1 1.7 3.3e-10 39.7 1.7 1.7 1 0 0 1 1 1 1 PKD domain PQQ_3 PF13570.6 gi|21226493|ref|NP_632415.1| - 7.5e-07 29.4 81.0 0.43 11.2 2.7 14.0 14 0 0 14 14 14 7 PQQ-like domain DUF4263 PF14082.6 gi|21226493|ref|NP_632415.1| - 0.00024 21.4 0.0 37 4.5 0.0 6.8 1 1 3 5 5 5 0 Domain of unknown function (DUF4263) CPSF_A PF03178.15 gi|21226493|ref|NP_632415.1| - 0.0017 17.7 1.5 0.9 8.8 0.0 4.2 4 1 1 5 5 5 1 CPSF A subunit region DUF1236 PF06823.12 gi|21226493|ref|NP_632415.1| - 0.6 10.0 22.2 2.3 8.1 0.1 6.8 8 0 0 8 8 8 0 Protein of unknown function (DUF1236) DUF1191 PF06697.12 gi|21226493|ref|NP_632415.1| - 7.5 6.3 7.1 18 5.1 0.1 3.7 3 1 1 4 4 4 0 Protein of unknown function (DUF1191) CCG PF02754.16 gi|21226494|ref|NP_632416.1| - 0.0002 21.5 0.0 0.00036 20.7 0.0 1.4 2 0 0 2 2 2 1 Cysteine-rich domain UPF0228 PF05727.11 gi|21226495|ref|NP_632417.1| - 2.8e-46 156.4 7.9 2.8e-46 156.4 5.0 1.9 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0228) VirB8 PF04335.13 gi|21226495|ref|NP_632417.1| - 0.062 13.1 0.0 0.097 12.5 0.0 1.3 1 0 0 1 1 1 0 VirB8 protein YscJ_FliF PF01514.17 gi|21226495|ref|NP_632417.1| - 0.076 12.7 0.1 0.11 12.1 0.1 1.4 1 0 0 1 1 1 0 Secretory protein of YscJ/FliF family Peptidase_C39_2 PF13529.6 gi|21226496|ref|NP_632418.1| - 1.8e-06 28.6 0.9 1.8e-06 28.6 0.9 2.5 3 1 0 3 3 3 1 Peptidase_C39 like family LicD PF04991.13 gi|21226496|ref|NP_632418.1| - 0.011 15.9 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 LicD family Peptidase_C70 PF12385.8 gi|21226496|ref|NP_632418.1| - 0.021 14.8 0.0 0.039 13.9 0.0 1.4 1 0 0 1 1 1 0 Papain-like cysteine protease AvrRpt2 Lactonase PF10282.9 gi|21226497|ref|NP_632419.1| - 4.3e-17 62.4 10.5 6.4e-08 32.2 0.3 3.2 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|21226497|ref|NP_632419.1| - 3.1e-10 40.1 14.5 0.00017 21.2 2.1 3.2 1 1 1 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|21226497|ref|NP_632419.1| - 5.1e-09 35.7 18.2 0.054 13.6 0.4 7.1 8 0 0 8 8 8 4 NHL repeat Cytochrom_D1 PF02239.16 gi|21226497|ref|NP_632419.1| - 7.3e-09 34.6 5.0 7.5e-07 28.0 3.7 2.7 1 1 1 2 2 2 2 Cytochrome D1 heme domain Arylesterase PF01731.20 gi|21226497|ref|NP_632419.1| - 5.1e-05 23.4 4.6 0.071 13.3 0.1 4.2 2 1 2 4 4 4 2 Arylesterase Ldl_recept_b PF00058.17 gi|21226497|ref|NP_632419.1| - 0.021 15.3 0.5 0.17 12.4 0.1 2.8 3 0 0 3 3 3 0 Low-density lipoprotein receptor repeat class B PCC_BT PF18140.1 gi|21226497|ref|NP_632419.1| - 0.022 15.1 9.1 2.7 8.4 4.2 3.2 1 1 2 3 3 3 0 Propionyl-coenzyme A carboxylase BT domain Str_synth PF03088.16 gi|21226497|ref|NP_632419.1| - 0.024 14.7 0.2 13 6.0 0.0 3.5 3 1 0 3 3 3 0 Strictosidine synthase P_proprotein PF01483.20 gi|21226497|ref|NP_632419.1| - 0.11 12.5 0.9 31 4.7 0.0 4.0 3 1 2 5 5 5 0 Proprotein convertase P-domain Arm-DNA-bind_3 PF13356.6 gi|21226497|ref|NP_632419.1| - 0.11 12.8 0.0 22 5.5 0.0 4.2 1 1 0 1 1 1 0 Arm DNA-binding domain Svf1 PF08622.10 gi|21226497|ref|NP_632419.1| - 0.27 11.3 3.1 18 5.3 0.1 3.2 1 1 2 3 3 3 0 Svf1-like N-terminal lipocalin domain Me-amine-dh_H PF06433.11 gi|21226497|ref|NP_632419.1| - 1.1 8.1 10.2 2.3 7.0 0.1 3.9 1 1 3 4 4 4 0 Methylamine dehydrogenase heavy chain (MADH) DDE_Tnp_IS66 PF03050.14 gi|21226498|ref|NP_632420.1| - 1.4e-74 251.1 0.0 1.6e-74 250.9 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21226498|ref|NP_632420.1| - 2.4e-10 40.6 4.9 7e-10 39.2 4.9 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21226498|ref|NP_632420.1| - 1.5e-05 25.2 5.1 0.027 14.7 0.3 3.0 2 1 1 3 3 3 2 DDE domain zf-RING_7 PF02591.15 gi|21226498|ref|NP_632420.1| - 0.031 14.5 0.1 0.031 14.5 0.1 2.0 2 0 0 2 2 1 0 C4-type zinc ribbon domain DZR PF12773.7 gi|21226498|ref|NP_632420.1| - 0.041 13.9 1.7 0.18 11.8 0.9 2.5 2 0 0 2 2 2 0 Double zinc ribbon Lar_restr_allev PF14354.6 gi|21226498|ref|NP_632420.1| - 0.074 13.4 0.2 0.074 13.4 0.2 3.0 3 0 0 3 3 3 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.6 gi|21226498|ref|NP_632420.1| - 0.11 12.2 5.8 2.9 7.7 0.2 2.8 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21226498|ref|NP_632420.1| - 0.12 12.5 3.6 2.1 8.6 3.6 2.8 1 1 0 1 1 1 0 Zinc ribbon domain DUF725 PF05267.12 gi|21226498|ref|NP_632420.1| - 0.16 12.0 2.5 0.47 10.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF725) zf-RING_5 PF14634.6 gi|21226498|ref|NP_632420.1| - 0.98 9.4 0.0 0.98 9.4 0.0 3.3 3 1 0 3 3 3 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21226498|ref|NP_632420.1| - 1 10.1 6.6 0.17 12.7 1.0 2.4 2 1 0 2 2 2 0 zinc-ribbon family Mut7-C PF01927.16 gi|21226498|ref|NP_632420.1| - 1.6 8.8 5.5 0.41 10.8 2.0 1.8 2 0 0 2 2 2 0 Mut7-C RNAse domain zf-ribbon_3 PF13248.6 gi|21226498|ref|NP_632420.1| - 5.9 6.4 8.0 3.9 7.0 0.2 3.0 3 0 0 3 3 3 0 zinc-ribbon domain Peptidase_C39_2 PF13529.6 gi|21226500|ref|NP_632422.1| - 6.3e-08 33.3 2.9 1.2e-07 32.3 0.2 2.7 2 2 1 3 3 3 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|21226500|ref|NP_632422.1| - 9.2e-05 22.5 0.0 0.00024 21.1 0.0 1.7 1 0 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 CCG PF02754.16 gi|21226501|ref|NP_632423.1| - 9.9e-05 22.5 0.0 0.00019 21.6 0.0 1.5 2 0 0 2 2 2 1 Cysteine-rich domain Gmx_para_CXXCG PF09535.10 gi|21226501|ref|NP_632423.1| - 0.063 12.5 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) UPF0228 PF05727.11 gi|21226502|ref|NP_632424.1| - 1.3e-50 170.4 5.6 1.4e-50 170.2 5.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) CBM39 PF15886.5 gi|21226502|ref|NP_632424.1| - 0.055 13.4 0.1 3.1 7.7 0.0 2.3 1 1 1 2 2 2 0 Carbohydrate binding domain (family 32) UPF0228 PF05727.11 gi|21226503|ref|NP_632425.1| - 4.9e-42 142.7 4.6 4.9e-42 142.7 4.6 1.8 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0228) ETRAMP PF09716.10 gi|21226503|ref|NP_632425.1| - 0.088 12.9 1.6 0.19 11.8 1.6 1.8 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) tRNA_anti-like PF12869.7 gi|21226503|ref|NP_632425.1| - 0.19 11.3 2.0 2.8 7.5 0.1 2.5 3 0 0 3 3 3 0 tRNA_anti-like Peptidase_C39_2 PF13529.6 gi|21226504|ref|NP_632426.1| - 1.2e-07 32.4 2.6 2e-07 31.6 0.7 2.4 2 0 0 2 2 2 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|21226504|ref|NP_632426.1| - 0.0019 18.2 0.0 0.0043 17.0 0.0 1.5 1 0 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 CCG PF02754.16 gi|21226505|ref|NP_632427.1| - 7.7e-05 22.8 0.0 0.00016 21.8 0.0 1.5 2 0 0 2 2 2 1 Cysteine-rich domain Gmx_para_CXXCG PF09535.10 gi|21226505|ref|NP_632427.1| - 0.058 12.6 0.0 0.078 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) Lactonase PF10282.9 gi|21226507|ref|NP_632429.1| - 3e-20 72.8 4.7 1.5e-07 31.0 0.2 3.5 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|21226507|ref|NP_632429.1| - 3.5e-11 42.3 7.3 0.00041 19.0 0.2 4.0 1 1 3 4 4 4 3 Cytochrome D1 heme domain SGL PF08450.12 gi|21226507|ref|NP_632429.1| - 8.7e-08 32.0 10.7 0.0037 16.9 0.8 3.8 1 1 1 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|21226507|ref|NP_632429.1| - 8.9e-07 28.7 16.6 0.71 10.0 0.0 7.8 9 0 0 9 9 8 2 NHL repeat PD40 PF07676.12 gi|21226507|ref|NP_632429.1| - 1e-06 28.5 0.0 2.2 8.3 0.0 4.8 5 0 0 5 5 4 1 WD40-like Beta Propeller Repeat Arylesterase PF01731.20 gi|21226507|ref|NP_632429.1| - 6.4e-06 26.3 14.4 0.13 12.5 0.1 6.8 3 2 4 8 8 8 2 Arylesterase Thioredox_DsbH PF03190.15 gi|21226507|ref|NP_632429.1| - 0.00035 20.6 0.1 5.5 6.9 0.0 3.7 3 0 0 3 3 3 2 Protein of unknown function, DUF255 DUF1513 PF07433.11 gi|21226507|ref|NP_632429.1| - 0.0059 15.7 1.6 0.027 13.5 0.1 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF1513) HIRA_B PF09453.10 gi|21226507|ref|NP_632429.1| - 0.0083 15.9 1.7 9 6.3 0.0 3.8 4 0 0 4 4 4 1 HIRA B motif Arm-DNA-bind_3 PF13356.6 gi|21226507|ref|NP_632429.1| - 0.01 16.2 0.0 21 5.6 0.0 4.5 2 1 1 3 3 3 0 Arm DNA-binding domain PBCV_basic_adap PF08789.10 gi|21226507|ref|NP_632429.1| - 0.081 13.1 9.8 18 5.5 0.0 5.5 6 0 0 6 6 6 0 PBCV-specific basic adaptor domain Kelch_6 PF13964.6 gi|21226507|ref|NP_632429.1| - 0.1 12.9 4.3 4.1 7.8 0.0 4.7 6 0 0 6 6 5 0 Kelch motif SspH PF08141.12 gi|21226507|ref|NP_632429.1| - 0.25 11.5 0.2 0.25 11.5 0.2 4.5 4 1 1 5 5 5 0 Small acid-soluble spore protein H family PapD_N PF00345.20 gi|21226507|ref|NP_632429.1| - 3.5 7.5 5.2 1.1 9.2 0.2 2.6 3 0 0 3 3 3 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain Peptidase_C39_2 PF13529.6 gi|21226508|ref|NP_632430.1| - 1.5e-08 35.3 0.7 4.4e-08 33.8 0.0 2.2 3 0 0 3 3 3 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|21226508|ref|NP_632430.1| - 7.4e-05 22.8 0.0 0.00015 21.8 0.0 1.5 1 0 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 Peptidase_C39 PF03412.15 gi|21226508|ref|NP_632430.1| - 0.013 15.4 0.0 0.038 13.8 0.0 1.8 2 0 0 2 2 2 0 Peptidase C39 family CutC PF03932.14 gi|21226508|ref|NP_632430.1| - 0.03 13.8 0.0 0.046 13.2 0.0 1.2 1 0 0 1 1 1 0 CutC family CCG PF02754.16 gi|21226509|ref|NP_632431.1| - 0.0001 22.4 0.0 0.00019 21.6 0.0 1.4 2 0 0 2 2 2 1 Cysteine-rich domain Gmx_para_CXXCG PF09535.10 gi|21226509|ref|NP_632431.1| - 0.073 12.3 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) Putative_PNPOx PF01243.20 gi|21226510|ref|NP_632432.1| - 1.3e-07 31.7 0.0 1.7e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Trehalose_PPase PF02358.16 gi|21226510|ref|NP_632432.1| - 0.024 13.8 0.0 0.032 13.4 0.0 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase Aconitase PF00330.20 gi|21226511|ref|NP_632433.1| - 2.9e-100 336.5 1.3 3.6e-98 329.5 1.3 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|21226511|ref|NP_632433.1| - 0.035 12.8 0.0 0.053 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) SEO_C PF14577.6 gi|21226512|ref|NP_632434.1| - 0.021 14.2 0.1 0.023 14.2 0.1 1.0 1 0 0 1 1 1 0 Sieve element occlusion C-terminus T2SSF PF00482.23 gi|21226514|ref|NP_632436.1| - 2.5e-06 27.5 0.2 5.1e-05 23.2 0.1 3.3 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F AgrB PF04647.15 gi|21226514|ref|NP_632436.1| - 0.00027 20.3 7.7 0.00027 20.3 7.7 2.4 3 0 0 3 3 3 1 Accessory gene regulator B MscS_TM PF12794.7 gi|21226514|ref|NP_632436.1| - 0.0029 16.5 1.6 0.0029 16.5 1.6 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel inner membrane domain 1 Ac76 PF05814.11 gi|21226514|ref|NP_632436.1| - 0.025 14.6 3.4 0.025 14.6 3.4 1.9 2 0 0 2 2 2 0 Orf76 (Ac76) TNFR_16_TM PF18422.1 gi|21226514|ref|NP_632436.1| - 0.2 11.7 7.1 0.71 9.9 0.7 2.9 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain T2SSE PF00437.20 gi|21226515|ref|NP_632437.1| - 1.7e-45 155.2 0.0 2.5e-45 154.7 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|21226515|ref|NP_632437.1| - 0.00014 21.5 0.0 0.00033 20.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|21226515|ref|NP_632437.1| - 0.0058 17.2 0.0 0.023 15.2 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_7 PF12775.7 gi|21226515|ref|NP_632437.1| - 0.02 14.4 0.0 0.062 12.8 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_16 PF13191.6 gi|21226515|ref|NP_632437.1| - 0.051 13.9 0.0 0.12 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain DLIC PF05783.11 gi|21226515|ref|NP_632437.1| - 0.11 11.3 1.9 4.1 6.1 1.1 2.2 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) ATPase PF06745.13 gi|21226516|ref|NP_632438.1| - 8.9e-22 77.6 0.0 1.1e-21 77.3 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|21226516|ref|NP_632438.1| - 7.3e-07 29.0 0.0 1.2e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|21226516|ref|NP_632438.1| - 7.4e-05 22.1 0.1 0.00011 21.5 0.1 1.2 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|21226516|ref|NP_632438.1| - 0.00044 19.8 0.0 0.00084 18.9 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein PAXNEB PF05625.11 gi|21226516|ref|NP_632438.1| - 0.0023 17.2 0.3 0.0084 15.3 0.0 1.8 2 0 0 2 2 2 1 PAXNEB protein DnaB_C PF03796.15 gi|21226516|ref|NP_632438.1| - 0.006 16.0 0.0 0.011 15.1 0.0 1.4 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_14 PF13173.6 gi|21226516|ref|NP_632438.1| - 0.0079 16.2 0.1 0.081 13.0 0.0 2.2 1 1 1 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|21226516|ref|NP_632438.1| - 0.019 14.9 0.0 0.028 14.3 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DAP3 PF10236.9 gi|21226516|ref|NP_632438.1| - 0.036 13.2 0.0 0.063 12.4 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_35 PF14516.6 gi|21226516|ref|NP_632438.1| - 0.052 12.4 0.0 0.089 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain Elong_Iki1 PF10483.9 gi|21226516|ref|NP_632438.1| - 0.15 11.5 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Elongator subunit Iki1 FtsK_SpoIIIE PF01580.18 gi|21226516|ref|NP_632438.1| - 0.18 11.1 0.0 0.42 9.9 0.0 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family Arch_flagellin PF01917.16 gi|21226517|ref|NP_632439.1| - 5.5e-06 26.7 0.1 6.6e-06 26.4 0.1 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.16 gi|21226518|ref|NP_632440.1| - 5.9e-06 26.6 0.0 9.4e-06 25.9 0.0 1.3 1 1 0 1 1 1 1 Archaebacterial flagellin Bac_export_2 PF01312.19 gi|21226518|ref|NP_632440.1| - 0.28 10.3 0.0 0.34 10.1 0.0 1.1 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family Arch_fla_DE PF04659.13 gi|21226519|ref|NP_632441.1| - 0.0012 18.6 0.1 0.0094 15.8 0.0 2.1 1 1 1 2 2 2 1 Archaeal flagella protein YabA PF06156.13 gi|21226519|ref|NP_632441.1| - 7.8 7.2 6.3 6.3 7.5 0.1 3.0 3 1 0 3 3 3 0 Initiation control protein YabA Arch_flagellin PF01917.16 gi|21226520|ref|NP_632442.1| - 1.3e-27 97.0 7.6 1.6e-27 96.7 7.6 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin TPP_enzyme_C PF02775.21 gi|21226521|ref|NP_632443.1| - 4.6e-29 101.2 0.0 7e-29 100.6 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|21226521|ref|NP_632443.1| - 1.1e-28 99.1 1.7 1.4e-28 98.8 0.9 1.6 2 0 0 2 2 2 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal POR_N PF01855.19 gi|21226522|ref|NP_632444.1| - 9.6e-55 185.8 0.0 1.4e-54 185.3 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|21226522|ref|NP_632444.1| - 1.7e-39 135.7 0.0 3.1e-39 134.9 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|21226522|ref|NP_632444.1| - 3e-06 27.5 0.0 6.6e-06 26.4 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II OrfB_IS605 PF01385.19 gi|21226523|ref|NP_632445.1| - 2.1e-27 95.7 2.2 2.8e-27 95.3 1.4 1.5 2 0 0 2 2 2 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|21226523|ref|NP_632445.1| - 1.1e-23 83.0 0.3 2.2e-23 81.9 0.3 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|21226523|ref|NP_632445.1| - 9.5e-21 73.0 0.3 1.8e-20 72.2 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|21226523|ref|NP_632445.1| - 0.005 17.0 2.4 0.0089 16.2 1.0 2.0 2 0 0 2 2 2 1 Piccolo Zn-finger DZR PF12773.7 gi|21226523|ref|NP_632445.1| - 0.075 13.1 0.6 0.14 12.2 0.6 1.4 1 0 0 1 1 1 0 Double zinc ribbon A2L_zn_ribbon PF08792.10 gi|21226523|ref|NP_632445.1| - 0.076 12.7 1.6 0.16 11.7 1.6 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain HypA PF01155.19 gi|21226523|ref|NP_632445.1| - 0.1 12.6 0.1 0.24 11.4 0.0 1.8 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RanBP PF00641.18 gi|21226523|ref|NP_632445.1| - 1.5 8.2 6.8 9.2 5.7 0.2 2.6 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Y1_Tnp PF01797.16 gi|21226524|ref|NP_632446.1| - 3.8e-36 123.9 2.4 4.4e-36 123.6 2.4 1.0 1 0 0 1 1 1 1 Transposase IS200 like DUF1699 PF08004.11 gi|21226525|ref|NP_632447.1| - 1.9e-62 208.7 1.5 2.1e-62 208.5 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) MA3 PF02847.17 gi|21226525|ref|NP_632447.1| - 0.11 12.5 0.9 3.3 7.7 0.1 2.1 2 0 0 2 2 2 0 MA3 domain Histidinol_dh PF00815.20 gi|21226526|ref|NP_632448.1| - 7.1e-170 565.4 4.5 8.4e-170 565.2 4.5 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase DEAD PF00270.29 gi|21226527|ref|NP_632449.1| - 9e-25 87.4 0.0 2.4e-24 86.1 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|21226527|ref|NP_632449.1| - 1.3e-08 35.2 0.0 5.2e-07 30.0 0.0 2.9 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|21226527|ref|NP_632449.1| - 3.4e-08 33.7 0.0 5.6e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HHH_5 PF14520.6 gi|21226527|ref|NP_632449.1| - 4.2e-08 33.7 0.1 1.8e-07 31.6 0.1 2.2 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|21226527|ref|NP_632449.1| - 0.012 15.7 0.0 0.042 14.0 0.0 2.0 1 0 0 1 1 1 0 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|21226527|ref|NP_632449.1| - 0.025 14.4 0.0 0.061 13.2 0.0 1.7 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|21226527|ref|NP_632449.1| - 0.11 12.7 0.0 0.24 11.7 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus ABC_tran PF00005.27 gi|21226528|ref|NP_632450.1| - 2.6e-38 131.6 0.0 5.7e-19 69.0 0.1 2.9 2 1 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|21226528|ref|NP_632450.1| - 2.1e-15 56.8 8.3 1.9e-05 24.2 0.0 4.1 4 0 0 4 4 4 3 RecF/RecN/SMC N terminal domain RLI PF04068.15 gi|21226528|ref|NP_632450.1| - 5.8e-12 45.2 3.9 1.1e-11 44.3 3.9 1.5 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI AAA_21 PF13304.6 gi|21226528|ref|NP_632450.1| - 2.3e-08 34.2 6.5 0.052 13.4 0.2 4.3 2 2 2 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system Fer4 PF00037.27 gi|21226528|ref|NP_632450.1| - 4.6e-08 32.5 4.5 4.6e-08 32.5 4.5 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_16 PF13191.6 gi|21226528|ref|NP_632450.1| - 2e-06 28.3 0.3 0.0057 17.1 0.0 2.9 2 1 0 3 3 3 1 AAA ATPase domain Rad17 PF03215.15 gi|21226528|ref|NP_632450.1| - 4.8e-06 26.6 0.2 0.083 12.8 0.0 2.4 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_23 PF13476.6 gi|21226528|ref|NP_632450.1| - 1.2e-05 25.9 1.2 0.045 14.2 0.0 2.4 2 0 0 2 2 2 2 AAA domain Fer4_6 PF12837.7 gi|21226528|ref|NP_632450.1| - 1.9e-05 24.5 13.4 1.9e-05 24.5 3.2 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_22 PF13401.6 gi|21226528|ref|NP_632450.1| - 9.5e-05 22.7 0.0 0.043 14.1 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|21226528|ref|NP_632450.1| - 0.00017 21.4 0.1 0.31 10.7 0.0 2.3 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|21226528|ref|NP_632450.1| - 0.00021 21.7 0.0 0.51 10.8 0.0 2.5 2 0 0 2 2 2 2 RNA helicase Fer4_21 PF14697.6 gi|21226528|ref|NP_632450.1| - 0.00022 21.3 7.4 0.00038 20.5 7.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_29 PF13555.6 gi|21226528|ref|NP_632450.1| - 0.00029 20.5 2.8 0.29 10.9 0.2 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain Fer4_2 PF12797.7 gi|21226528|ref|NP_632450.1| - 0.00038 20.4 1.8 0.00038 20.4 1.8 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain RsgA_GTPase PF03193.16 gi|21226528|ref|NP_632450.1| - 0.0004 20.3 1.3 0.13 12.1 0.1 2.3 2 0 0 2 2 2 1 RsgA GTPase Fer4_9 PF13187.6 gi|21226528|ref|NP_632450.1| - 0.00054 20.1 8.6 0.00098 19.2 8.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21226528|ref|NP_632450.1| - 0.00078 20.0 8.5 0.0019 18.8 8.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_15 PF13175.6 gi|21226528|ref|NP_632450.1| - 0.001 18.9 3.4 0.82 9.3 0.0 3.2 3 0 0 3 3 3 1 AAA ATPase domain Fer4_10 PF13237.6 gi|21226528|ref|NP_632450.1| - 0.0024 17.9 11.3 0.0048 17.0 1.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA PF00004.29 gi|21226528|ref|NP_632450.1| - 0.0033 17.9 0.1 0.4 11.1 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|21226528|ref|NP_632450.1| - 0.0045 16.9 0.1 0.36 10.7 0.0 2.4 2 0 0 2 2 2 1 NACHT domain AAA_14 PF13173.6 gi|21226528|ref|NP_632450.1| - 0.031 14.3 2.9 3.3 7.7 0.1 3.6 3 1 0 3 3 3 0 AAA domain AAA_5 PF07728.14 gi|21226528|ref|NP_632450.1| - 0.036 14.1 1.2 17 5.4 0.0 3.2 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) DUF87 PF01935.17 gi|21226528|ref|NP_632450.1| - 0.038 14.1 2.6 1.7 8.7 0.0 2.7 3 0 0 3 3 3 0 Helicase HerA, central domain AAA_33 PF13671.6 gi|21226528|ref|NP_632450.1| - 0.053 13.7 0.9 1.6 8.9 0.0 2.9 3 0 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 gi|21226528|ref|NP_632450.1| - 0.053 13.4 1.8 3.8 7.4 0.0 3.3 3 0 0 3 3 3 0 NTPase AAA_18 PF13238.6 gi|21226528|ref|NP_632450.1| - 0.055 14.0 1.1 57 4.3 0.0 3.4 3 0 0 3 3 3 0 AAA domain AAA_25 PF13481.6 gi|21226528|ref|NP_632450.1| - 0.11 12.0 2.3 1.5 8.3 0.0 3.1 4 0 0 4 4 4 0 AAA domain Fer4_4 PF12800.7 gi|21226528|ref|NP_632450.1| - 0.12 13.0 14.3 0.081 13.5 3.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain MeaB PF03308.16 gi|21226528|ref|NP_632450.1| - 0.17 10.8 2.5 3.2 6.7 0.1 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SbcCD_C PF13558.6 gi|21226528|ref|NP_632450.1| - 0.17 12.1 0.0 35 4.7 0.0 2.8 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 gi|21226528|ref|NP_632450.1| - 0.2 11.8 2.5 1.8 8.7 0.2 2.8 2 2 0 2 2 2 0 50S ribosome-binding GTPase SRP54 PF00448.22 gi|21226528|ref|NP_632450.1| - 0.34 10.5 1.2 15 5.1 0.0 2.8 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|21226528|ref|NP_632450.1| - 1.6 8.4 4.4 18 5.0 0.1 3.2 4 0 0 4 4 4 0 AAA domain Rab5ip PF07019.12 gi|21226529|ref|NP_632451.1| - 0.095 13.3 5.4 0.15 12.6 5.4 1.3 1 0 0 1 1 1 0 Rab5-interacting protein (Rab5ip) DUF2964 PF11177.8 gi|21226529|ref|NP_632451.1| - 0.47 10.7 2.1 1.3 9.2 2.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2964) Lactamase_B_2 PF12706.7 gi|21226530|ref|NP_632452.1| - 2.1e-06 27.4 0.9 9.7e-06 25.2 0.3 2.0 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|21226530|ref|NP_632452.1| - 0.016 15.1 0.3 0.11 12.3 0.2 2.2 2 1 0 2 2 2 0 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|21226530|ref|NP_632452.1| - 0.24 11.4 5.8 2.1 8.3 5.7 2.2 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily N6_Mtase PF02384.16 gi|21226531|ref|NP_632453.1| - 6.3e-119 396.9 0.0 8.9e-119 396.4 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|21226531|ref|NP_632453.1| - 5.4e-22 78.9 3.2 5.4e-22 78.9 3.2 2.0 2 0 0 2 2 2 1 HsdM N-terminal domain DUF2040 PF09745.9 gi|21226531|ref|NP_632453.1| - 0.0015 18.6 0.2 0.014 15.5 0.0 2.4 2 0 0 2 2 2 1 Coiled-coil domain-containing protein 55 (DUF2040) Eco57I PF07669.11 gi|21226531|ref|NP_632453.1| - 0.088 13.3 0.0 0.46 11.0 0.0 2.3 1 1 0 1 1 1 0 Eco57I restriction-modification methylase MTS PF05175.14 gi|21226531|ref|NP_632453.1| - 0.12 12.0 0.0 0.26 10.8 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Methylase_S PF01420.19 gi|21226532|ref|NP_632454.1| - 2.9e-23 82.9 4.5 9.3e-14 52.0 2.2 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain DUF3387 PF11867.8 gi|21226533|ref|NP_632455.1| - 3.9e-124 414.3 9.6 6.3e-124 413.7 9.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3387) SWI2_SNF2 PF18766.1 gi|21226533|ref|NP_632455.1| - 8.2e-80 267.7 1.6 9.8e-80 267.4 0.0 1.9 2 0 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|21226533|ref|NP_632455.1| - 2.9e-46 157.9 0.3 2.9e-46 157.9 0.3 3.0 3 0 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|21226533|ref|NP_632455.1| - 1.1e-15 58.0 0.6 4.4e-15 56.1 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Thr_synth_N PF14821.6 gi|21226533|ref|NP_632455.1| - 0.0033 17.6 0.0 0.31 11.3 0.0 2.8 2 0 0 2 2 2 1 Threonine synthase N terminus Helicase_C PF00271.31 gi|21226533|ref|NP_632455.1| - 0.0083 16.5 0.1 0.074 13.4 0.0 2.7 3 0 0 3 3 3 1 Helicase conserved C-terminal domain MSA-2c PF12238.8 gi|21226533|ref|NP_632455.1| - 0.058 13.4 0.5 0.12 12.4 0.5 1.5 1 0 0 1 1 1 0 Merozoite surface antigen 2c THP2 PF09432.10 gi|21226533|ref|NP_632455.1| - 0.14 12.2 3.3 0.67 10.0 1.3 3.0 3 0 0 3 3 3 0 Tho complex subunit THP2 ApoLp-III PF07464.11 gi|21226533|ref|NP_632455.1| - 0.6 10.2 5.9 5.6 7.1 2.2 2.9 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) TetR_N PF00440.23 gi|21226534|ref|NP_632456.1| - 1.1e-08 34.8 0.0 2.3e-08 33.7 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Sigma70_r4_2 PF08281.12 gi|21226534|ref|NP_632456.1| - 0.0019 17.9 0.0 0.0054 16.4 0.0 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 Terminase_5 PF06056.12 gi|21226534|ref|NP_632456.1| - 0.0029 17.5 0.0 0.0058 16.5 0.0 1.6 1 1 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HDC PF02329.16 gi|21226534|ref|NP_632456.1| - 0.06 12.4 0.0 0.081 11.9 0.0 1.1 1 0 0 1 1 1 0 Histidine carboxylase PI chain TetR_C_27 PF17935.1 gi|21226534|ref|NP_632456.1| - 0.2 11.7 0.0 2.2 8.4 0.0 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF1638 PF07796.11 gi|21226535|ref|NP_632457.1| - 8.7e-36 123.4 0.0 1.1e-35 123.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF1638 PF07796.11 gi|21226536|ref|NP_632458.1| - 9.7e-31 107.0 0.1 1.7e-30 106.2 0.0 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1638) Curlin_rpt PF07012.12 gi|21226536|ref|NP_632458.1| - 0.31 11.1 1.7 0.55 10.3 1.7 1.4 1 0 0 1 1 1 0 Curlin associated repeat DUF1699 PF08004.11 gi|21226537|ref|NP_632459.1| - 8.1e-63 209.9 1.9 9.1e-63 209.7 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) PAM2 PF07145.15 gi|21226537|ref|NP_632459.1| - 0.057 13.1 0.1 8 6.4 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region DUF4394 PF14339.6 gi|21226537|ref|NP_632459.1| - 0.1 11.9 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) Thioredoxin PF00085.20 gi|21226538|ref|NP_632460.1| - 2.1e-24 85.5 0.0 2.3e-24 85.3 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|21226538|ref|NP_632460.1| - 4.9e-09 36.6 0.1 2.5e-08 34.3 0.1 1.8 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|21226538|ref|NP_632460.1| - 4.9e-09 36.4 0.0 6e-06 26.5 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like Glutaredoxin PF00462.24 gi|21226538|ref|NP_632460.1| - 4.7e-07 29.9 0.0 8e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin TraF PF13728.6 gi|21226538|ref|NP_632460.1| - 6.2e-07 29.5 0.0 7.3e-07 29.2 0.0 1.0 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_9 PF14595.6 gi|21226538|ref|NP_632460.1| - 6.5e-07 29.2 0.0 8e-07 28.9 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.6 gi|21226538|ref|NP_632460.1| - 3.8e-06 26.8 0.0 4.5e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin domain KaiB PF07689.12 gi|21226538|ref|NP_632460.1| - 5.9e-06 25.9 0.0 6.9e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 KaiB domain Redoxin PF08534.10 gi|21226538|ref|NP_632460.1| - 6.5e-06 25.9 0.1 0.004 16.9 0.0 2.0 1 1 1 2 2 2 2 Redoxin Thioredoxin_7 PF13899.6 gi|21226538|ref|NP_632460.1| - 6.7e-05 23.0 0.0 9.8e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like DUF836 PF05768.14 gi|21226538|ref|NP_632460.1| - 0.00012 22.4 0.0 0.00014 22.2 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) HyaE PF07449.11 gi|21226538|ref|NP_632460.1| - 0.00037 20.4 0.0 0.00045 20.2 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE ABC_transp_aux PF09822.9 gi|21226538|ref|NP_632460.1| - 0.00088 18.8 0.0 0.001 18.6 0.0 1.0 1 0 0 1 1 1 1 ABC-type uncharacterized transport system DSBA PF01323.20 gi|21226538|ref|NP_632460.1| - 0.002 17.9 0.1 0.1 12.4 0.0 2.0 1 1 1 2 2 2 1 DSBA-like thioredoxin domain AhpC-TSA PF00578.21 gi|21226538|ref|NP_632460.1| - 0.0038 17.1 0.1 0.35 10.8 0.0 2.0 1 1 1 2 2 2 1 AhpC/TSA family Thioredoxin_6 PF13848.6 gi|21226538|ref|NP_632460.1| - 0.0052 16.7 0.0 0.0052 16.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 gi|21226538|ref|NP_632460.1| - 0.007 15.8 0.0 0.0073 15.7 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_5 PF13743.6 gi|21226538|ref|NP_632460.1| - 0.012 15.4 0.1 4.3 7.0 0.0 2.0 1 1 1 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 gi|21226538|ref|NP_632460.1| - 0.039 14.1 0.1 0.6 10.3 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin DUF953 PF06110.11 gi|21226538|ref|NP_632460.1| - 0.14 11.8 0.1 0.65 9.6 0.1 1.8 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) F420_ligase PF01996.16 gi|21226539|ref|NP_632461.1| - 3.8e-56 190.2 0.0 4.4e-56 190.0 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase MTHFR PF02219.17 gi|21226540|ref|NP_632462.1| - 1.8e-37 129.2 0.0 2.1e-37 129.0 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase MTHFR_C PF12225.8 gi|21226541|ref|NP_632463.1| - 3.5e-31 106.7 1.4 3.5e-31 106.7 1.4 1.8 2 1 1 3 3 3 1 Methylene-tetrahydrofolate reductase C terminal DUF707 PF05212.12 gi|21226541|ref|NP_632463.1| - 0.058 12.6 0.0 0.08 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF707) PrmA PF06325.13 gi|21226541|ref|NP_632463.1| - 0.21 11.0 0.1 0.29 10.5 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Pterin_bind PF00809.22 gi|21226542|ref|NP_632464.1| - 2.5e-59 200.9 0.0 3.4e-59 200.5 0.0 1.2 1 0 0 1 1 1 1 Pterin binding enzyme THF_DHG_CYH_C PF02882.19 gi|21226543|ref|NP_632465.1| - 7.8e-65 217.1 2.6 1e-64 216.7 2.6 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|21226543|ref|NP_632465.1| - 3.3e-39 133.7 0.0 4.6e-39 133.3 0.0 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AdoHcyase_NAD PF00670.21 gi|21226543|ref|NP_632465.1| - 0.042 13.9 1.1 2.2 8.3 1.0 2.3 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SHMT PF00464.19 gi|21226544|ref|NP_632466.1| - 5.1e-177 588.4 0.2 6e-177 588.2 0.2 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|21226544|ref|NP_632466.1| - 1.2e-09 37.8 0.0 1.7e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|21226544|ref|NP_632466.1| - 6.8e-06 25.6 0.0 1.2e-05 24.7 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|21226544|ref|NP_632466.1| - 0.009 15.4 0.0 0.012 14.9 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 gi|21226544|ref|NP_632466.1| - 0.014 14.1 0.0 0.032 13.0 0.0 1.5 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Formyl_trans_N PF00551.19 gi|21226545|ref|NP_632467.1| - 2e-59 200.4 0.0 2.3e-59 200.2 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase HTH_3 PF01381.22 gi|21226546|ref|NP_632468.1| - 2.2e-08 34.0 0.1 6.9e-08 32.4 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|21226546|ref|NP_632468.1| - 1.4e-06 28.2 0.1 1.6e-05 24.8 0.0 2.7 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|21226546|ref|NP_632468.1| - 0.00013 22.2 0.0 0.00024 21.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.23 gi|21226546|ref|NP_632468.1| - 0.0042 16.8 0.1 0.013 15.3 0.1 1.9 1 0 0 1 1 1 1 MerR family regulatory protein HTH_11 PF08279.12 gi|21226546|ref|NP_632468.1| - 0.0059 16.5 0.3 0.024 14.6 0.1 2.1 2 0 0 2 2 2 1 HTH domain MerR_1 PF13411.6 gi|21226546|ref|NP_632468.1| - 0.033 14.3 0.0 0.078 13.1 0.0 1.6 1 0 0 1 1 1 0 MerR HTH family regulatory protein DUF1743 PF08489.11 gi|21226547|ref|NP_632469.1| - 8.5e-45 151.6 0.0 2.8e-44 149.9 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.25 gi|21226547|ref|NP_632469.1| - 0.00017 21.5 0.0 0.0004 20.3 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain OrfB_Zn_ribbon PF07282.11 gi|21226547|ref|NP_632469.1| - 0.009 15.9 2.7 0.026 14.5 2.7 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain DZR PF12773.7 gi|21226547|ref|NP_632469.1| - 0.015 15.3 1.8 0.021 14.8 0.8 1.7 2 0 0 2 2 1 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.7 gi|21226547|ref|NP_632469.1| - 0.018 15.0 2.3 0.047 13.7 2.3 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|21226547|ref|NP_632469.1| - 0.019 14.8 1.2 0.06 13.2 1.2 1.8 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit Zn_ribbon_SprT PF17283.2 gi|21226547|ref|NP_632469.1| - 0.025 14.5 2.4 0.15 12.0 1.6 2.3 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|21226547|ref|NP_632469.1| - 0.029 14.4 0.6 0.074 13.0 0.6 1.7 1 0 0 1 1 1 0 zinc-ribbons Zn-ribbon_8 PF09723.10 gi|21226547|ref|NP_632469.1| - 0.03 14.5 0.8 4.9 7.4 0.1 2.8 2 0 0 2 2 2 0 Zinc ribbon domain C1_1 PF00130.22 gi|21226547|ref|NP_632469.1| - 0.091 12.7 1.6 0.19 11.7 1.6 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zinc_ribbon_2 PF13240.6 gi|21226547|ref|NP_632469.1| - 0.15 11.9 4.5 7.9 6.3 0.2 2.9 3 0 0 3 3 3 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|21226547|ref|NP_632469.1| - 0.2 11.3 2.2 2 8.1 0.2 2.6 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger DNA_RNApol_7kD PF03604.13 gi|21226547|ref|NP_632469.1| - 0.27 11.0 3.8 0.86 9.3 3.8 1.9 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Rubredoxin_2 PF18073.1 gi|21226547|ref|NP_632469.1| - 1.1 9.0 3.5 3 7.6 0.1 2.6 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-ribbon_3 PF13248.6 gi|21226547|ref|NP_632469.1| - 1.1 8.7 4.3 3.9 7.0 0.1 2.9 3 0 0 3 3 3 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|21226547|ref|NP_632469.1| - 6.7 6.3 6.0 71 3.0 5.3 2.9 2 1 0 2 2 2 0 TFIIB zinc-binding NAD_synthase PF02540.17 gi|21226548|ref|NP_632470.1| - 3.8e-86 288.1 0.0 4.4e-86 287.9 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|21226548|ref|NP_632470.1| - 5.2e-05 22.2 0.0 0.00013 20.9 0.0 1.6 2 0 0 2 2 2 1 tRNA methyl transferase Asn_synthase PF00733.21 gi|21226548|ref|NP_632470.1| - 0.027 14.1 0.1 0.035 13.8 0.1 1.2 1 0 0 1 1 1 0 Asparagine synthase QueC PF06508.13 gi|21226548|ref|NP_632470.1| - 0.032 13.7 0.0 0.095 12.2 0.0 1.7 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC AAA PF00004.29 gi|21226549|ref|NP_632471.1| - 3.4e-97 322.0 0.0 2.4e-47 160.7 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|21226549|ref|NP_632471.1| - 3e-32 110.2 0.7 3.8e-18 65.0 0.4 2.7 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|21226549|ref|NP_632471.1| - 5.4e-31 106.6 0.2 2.1e-30 104.7 0.2 2.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain CDC48_2 PF02933.17 gi|21226549|ref|NP_632471.1| - 3e-16 58.9 0.3 4.6e-15 55.2 0.4 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 RuvB_N PF05496.12 gi|21226549|ref|NP_632471.1| - 2e-15 56.9 0.0 1.1e-07 31.8 0.0 2.9 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|21226549|ref|NP_632471.1| - 5.3e-14 52.4 0.2 2.1e-05 24.6 0.0 3.4 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 gi|21226549|ref|NP_632471.1| - 5.7e-13 49.3 0.1 6.9e-05 23.0 0.0 3.1 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|21226549|ref|NP_632471.1| - 6.9e-13 49.3 0.2 0.00016 22.1 0.0 3.8 2 2 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|21226549|ref|NP_632471.1| - 1.7e-11 44.5 1.0 0.0069 16.7 0.1 4.2 3 2 0 3 3 2 2 AAA domain AAA_14 PF13173.6 gi|21226549|ref|NP_632471.1| - 1.2e-10 41.5 0.0 0.00014 21.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|21226549|ref|NP_632471.1| - 1.8e-10 40.6 2.7 5.2e-06 25.9 0.0 3.1 3 1 1 4 4 3 2 TIP49 P-loop domain IstB_IS21 PF01695.17 gi|21226549|ref|NP_632471.1| - 5.7e-09 36.0 0.0 0.0016 18.2 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_33 PF13671.6 gi|21226549|ref|NP_632471.1| - 1.9e-08 34.6 0.0 0.0073 16.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|21226549|ref|NP_632471.1| - 4.4e-08 33.7 0.0 0.019 15.5 0.0 2.9 2 1 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|21226549|ref|NP_632471.1| - 5.6e-08 32.6 0.6 0.11 12.1 0.0 4.1 4 0 0 4 4 4 3 AAA domain AAA_7 PF12775.7 gi|21226549|ref|NP_632471.1| - 2.7e-07 30.3 0.0 0.0073 15.8 0.0 2.8 3 0 0 3 3 2 2 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|21226549|ref|NP_632471.1| - 5.4e-07 29.5 0.1 0.019 14.7 0.0 3.6 3 1 0 3 3 3 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|21226549|ref|NP_632471.1| - 1.2e-06 28.1 0.3 0.035 13.5 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|21226549|ref|NP_632471.1| - 2.3e-06 27.9 0.0 0.094 13.1 0.0 2.6 2 0 0 2 2 2 2 RNA helicase ATPase PF06745.13 gi|21226549|ref|NP_632471.1| - 4.5e-06 26.2 1.1 0.035 13.5 0.1 4.0 3 1 1 4 4 4 1 KaiC AAA_28 PF13521.6 gi|21226549|ref|NP_632471.1| - 5e-06 26.8 0.0 0.1 12.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|21226549|ref|NP_632471.1| - 8.1e-06 25.7 0.0 0.17 11.6 0.0 2.6 2 0 0 2 2 2 2 AAA domain Parvo_NS1 PF01057.17 gi|21226549|ref|NP_632471.1| - 1.3e-05 24.4 0.1 0.12 11.5 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 Zeta_toxin PF06414.12 gi|21226549|ref|NP_632471.1| - 1.7e-05 24.2 0.2 0.043 13.1 0.1 2.6 2 0 0 2 2 2 2 Zeta toxin PhoH PF02562.16 gi|21226549|ref|NP_632471.1| - 3e-05 23.6 0.0 0.37 10.2 0.0 2.9 2 0 0 2 2 2 2 PhoH-like protein ABC_tran PF00005.27 gi|21226549|ref|NP_632471.1| - 4.3e-05 24.0 0.1 0.37 11.3 0.0 3.0 3 0 0 3 3 2 2 ABC transporter TsaE PF02367.17 gi|21226549|ref|NP_632471.1| - 5.7e-05 23.1 0.0 0.34 10.9 0.0 2.6 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_17 PF13207.6 gi|21226549|ref|NP_632471.1| - 7.9e-05 23.1 0.3 0.41 11.1 0.0 3.6 4 0 0 4 4 2 1 AAA domain AAA_3 PF07726.11 gi|21226549|ref|NP_632471.1| - 9.3e-05 22.3 0.0 0.76 9.6 0.0 3.0 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 gi|21226549|ref|NP_632471.1| - 0.00015 21.2 0.0 0.35 10.1 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) ATPase_2 PF01637.18 gi|21226549|ref|NP_632471.1| - 0.00019 21.5 0.5 0.32 10.9 0.0 3.7 3 1 0 3 3 2 1 ATPase domain predominantly from Archaea Vps4_C PF09336.10 gi|21226549|ref|NP_632471.1| - 0.00024 21.0 0.1 0.085 12.9 0.0 2.7 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain DUF815 PF05673.13 gi|21226549|ref|NP_632471.1| - 0.00031 20.0 0.0 0.26 10.4 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) NB-ARC PF00931.22 gi|21226549|ref|NP_632471.1| - 0.00043 19.6 0.0 0.95 8.6 0.0 2.6 2 0 0 2 2 2 2 NB-ARC domain AAA_11 PF13086.6 gi|21226549|ref|NP_632471.1| - 0.00044 20.1 0.1 0.68 9.7 0.0 2.9 3 0 0 3 3 3 1 AAA domain AAA_19 PF13245.6 gi|21226549|ref|NP_632471.1| - 0.001 19.4 2.6 1.9 8.8 0.0 3.5 3 1 1 4 4 3 2 AAA domain Bac_DnaA PF00308.18 gi|21226549|ref|NP_632471.1| - 0.0025 17.7 0.0 1.2 9.0 0.0 2.5 2 0 0 2 2 2 1 Bacterial dnaA protein Rad17 PF03215.15 gi|21226549|ref|NP_632471.1| - 0.003 17.5 0.1 0.81 9.6 0.0 3.1 2 1 1 3 3 3 1 Rad17 P-loop domain Cytidylate_kin2 PF13189.6 gi|21226549|ref|NP_632471.1| - 0.003 17.7 0.0 0.27 11.3 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase-like family Sigma54_activ_2 PF14532.6 gi|21226549|ref|NP_632471.1| - 0.003 17.7 0.0 3.1 7.9 0.0 2.6 2 0 0 2 2 2 1 Sigma-54 interaction domain NACHT PF05729.12 gi|21226549|ref|NP_632471.1| - 0.003 17.5 0.3 5.8 6.8 0.0 3.4 4 0 0 4 4 3 0 NACHT domain Guanylate_kin PF00625.21 gi|21226549|ref|NP_632471.1| - 0.0031 17.2 0.2 5.9 6.5 0.0 4.0 2 2 2 4 4 4 0 Guanylate kinase ResIII PF04851.15 gi|21226549|ref|NP_632471.1| - 0.0039 17.2 0.1 1.5 8.8 0.0 3.0 3 1 0 3 3 2 1 Type III restriction enzyme, res subunit TniB PF05621.11 gi|21226549|ref|NP_632471.1| - 0.0043 16.5 0.2 8.2 5.8 0.0 3.5 4 0 0 4 4 4 0 Bacterial TniB protein IPT PF01745.16 gi|21226549|ref|NP_632471.1| - 0.0047 16.4 0.1 1.4 8.3 0.0 2.7 2 0 0 2 2 2 1 Isopentenyl transferase NTPase_1 PF03266.15 gi|21226549|ref|NP_632471.1| - 0.0082 16.1 1.5 8.2 6.3 0.0 3.6 2 1 1 3 3 3 0 NTPase AAA_30 PF13604.6 gi|21226549|ref|NP_632471.1| - 0.011 15.5 5.4 0.81 9.4 0.3 3.1 3 1 0 3 3 2 0 AAA domain T2SSE PF00437.20 gi|21226549|ref|NP_632471.1| - 0.013 14.5 0.0 0.54 9.3 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein ATP-synt_ab PF00006.25 gi|21226549|ref|NP_632471.1| - 0.015 15.0 0.0 1.5 8.4 0.0 2.5 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Cytidylate_kin PF02224.18 gi|21226549|ref|NP_632471.1| - 0.019 14.7 0.3 4.8 6.9 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase Viral_helicase1 PF01443.18 gi|21226549|ref|NP_632471.1| - 0.022 14.5 0.0 0.16 11.7 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Hydin_ADK PF17213.3 gi|21226549|ref|NP_632471.1| - 0.074 13.3 1.4 3 8.1 0.1 2.4 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain SKI PF01202.22 gi|21226549|ref|NP_632471.1| - 0.08 13.1 0.8 12 6.0 0.0 3.0 3 0 0 3 3 2 0 Shikimate kinase Zot PF05707.12 gi|21226549|ref|NP_632471.1| - 0.15 11.7 0.0 4.3 6.9 0.0 2.7 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) KAP_NTPase PF07693.14 gi|21226549|ref|NP_632471.1| - 0.2 10.9 0.1 7.3 5.7 0.0 3.0 3 1 1 4 4 4 0 KAP family P-loop domain PRC PF05239.16 gi|21226550|ref|NP_632472.1| - 1.4e-16 60.4 0.1 1.5e-16 60.3 0.1 1.0 1 0 0 1 1 1 1 PRC-barrel domain DUF2171 PF09939.9 gi|21226550|ref|NP_632472.1| - 0.11 12.8 0.0 0.22 11.8 0.0 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2171) Methyltransf_25 PF13649.6 gi|21226551|ref|NP_632473.1| - 9.9e-13 48.6 0.0 2e-12 47.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21226551|ref|NP_632473.1| - 2.7e-11 43.3 0.0 3.8e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 gi|21226551|ref|NP_632473.1| - 3.1e-11 43.8 0.0 6.4e-11 42.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21226551|ref|NP_632473.1| - 1.5e-08 34.7 0.0 2.1e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21226551|ref|NP_632473.1| - 1.2e-06 28.4 0.0 3.8e-06 26.8 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|21226551|ref|NP_632473.1| - 3.2e-05 23.4 0.0 4.6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|21226551|ref|NP_632473.1| - 0.0002 20.9 0.0 0.00029 20.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|21226551|ref|NP_632473.1| - 0.00024 21.8 0.0 0.00042 21.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|21226551|ref|NP_632473.1| - 0.00053 20.0 0.0 0.00084 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21226551|ref|NP_632473.1| - 0.00065 19.5 0.0 0.0012 18.7 0.0 1.5 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 gi|21226551|ref|NP_632473.1| - 0.0028 17.1 0.0 0.0064 15.9 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.20 gi|21226551|ref|NP_632473.1| - 0.0076 15.4 0.0 0.0099 15.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.6 gi|21226551|ref|NP_632473.1| - 0.01 16.9 0.0 0.037 15.1 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21226551|ref|NP_632473.1| - 0.022 14.1 0.0 0.033 13.5 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_16 PF10294.9 gi|21226551|ref|NP_632473.1| - 0.062 13.0 0.1 0.1 12.4 0.1 1.5 1 1 0 1 1 1 0 Lysine methyltransferase TPMT PF05724.11 gi|21226551|ref|NP_632473.1| - 0.066 12.9 0.0 0.083 12.5 0.0 1.4 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) MetW PF07021.12 gi|21226551|ref|NP_632473.1| - 0.099 12.2 0.2 0.17 11.5 0.0 1.5 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 gi|21226551|ref|NP_632473.1| - 0.11 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain FtsJ PF01728.19 gi|21226551|ref|NP_632473.1| - 0.16 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase GrpB PF04229.14 gi|21226552|ref|NP_632474.1| - 1.6e-45 155.2 0.0 1.8e-45 155.0 0.0 1.0 1 0 0 1 1 1 1 GrpB protein MHB PF16525.5 gi|21226552|ref|NP_632474.1| - 0.00033 20.8 0.0 0.00066 19.9 0.0 1.5 1 0 0 1 1 1 1 Haemophore, haem-binding Cupin_2 PF07883.11 gi|21226553|ref|NP_632475.1| - 1.9e-06 27.5 0.0 3.4e-06 26.7 0.0 1.5 1 1 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|21226553|ref|NP_632475.1| - 2.6e-05 24.1 0.0 4.1e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|21226553|ref|NP_632475.1| - 0.056 13.3 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Crisp PF08562.10 gi|21226554|ref|NP_632476.1| - 0.041 14.5 2.7 0.042 14.4 1.3 1.7 2 0 0 2 2 2 0 Crisp BHD_1 PF10403.9 gi|21226554|ref|NP_632476.1| - 0.14 12.1 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Rad4 beta-hairpin domain 1 DUF2795 PF11387.8 gi|21226555|ref|NP_632477.1| - 5.4e-12 45.7 0.0 7.6e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) DUF3593 PF12159.8 gi|21226556|ref|NP_632478.1| - 0.011 15.8 1.0 0.011 15.8 1.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3593) 7TMR-DISM_7TM PF07695.11 gi|21226556|ref|NP_632478.1| - 0.033 14.1 14.7 0.4 10.5 5.1 2.1 2 0 0 2 2 2 0 7TM diverse intracellular signalling MerC PF03203.14 gi|21226556|ref|NP_632478.1| - 0.052 14.0 2.7 0.052 14.0 2.7 2.2 2 0 0 2 2 2 0 MerC mercury resistance protein E1-E2_ATPase PF00122.20 gi|21226556|ref|NP_632478.1| - 0.35 10.4 3.0 1.4 8.4 0.1 2.1 2 0 0 2 2 2 0 E1-E2 ATPase DUF2207 PF09972.9 gi|21226556|ref|NP_632478.1| - 0.84 8.3 10.2 0.091 11.5 0.6 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) Transglut_core PF01841.19 gi|21226557|ref|NP_632479.1| - 2.5e-13 50.5 0.0 3.6e-13 49.9 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF4731 PF15875.5 gi|21226557|ref|NP_632479.1| - 0.12 12.6 0.0 0.3 11.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) TauD PF02668.16 gi|21226557|ref|NP_632479.1| - 0.18 11.5 0.1 11 5.8 0.0 2.0 2 0 0 2 2 2 0 Taurine catabolism dioxygenase TauD, TfdA family Hydrolase_3 PF08282.12 gi|21226558|ref|NP_632480.1| - 2.5e-29 102.8 3.3 2.2e-21 76.7 0.8 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|21226558|ref|NP_632480.1| - 3e-08 33.5 0.0 1.6e-06 27.9 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 gi|21226558|ref|NP_632480.1| - 4e-07 30.5 3.7 0.00097 19.5 0.3 2.7 1 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.16 gi|21226558|ref|NP_632480.1| - 0.00026 20.2 0.0 0.00044 19.5 0.0 1.4 1 0 0 1 1 1 1 Trehalose-phosphatase HAD PF12710.7 gi|21226558|ref|NP_632480.1| - 0.002 18.6 0.4 8.4 6.7 0.0 3.3 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Rad51 PF08423.11 gi|21226559|ref|NP_632481.1| - 1.7e-85 286.4 0.0 2.2e-85 286.0 0.0 1.1 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|21226559|ref|NP_632481.1| - 3.9e-13 49.8 0.6 1.1e-12 48.4 0.6 1.8 2 0 0 2 2 1 1 Helix-hairpin-helix domain RecA PF00154.21 gi|21226559|ref|NP_632481.1| - 5.9e-09 35.8 0.1 1.9e-07 30.8 0.1 2.2 1 1 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|21226559|ref|NP_632481.1| - 2.6e-07 30.4 0.0 4.2e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain HHH PF00633.23 gi|21226559|ref|NP_632481.1| - 1.6e-06 27.7 2.5 0.0036 17.1 0.1 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif ATPase PF06745.13 gi|21226559|ref|NP_632481.1| - 2.7e-06 26.9 0.6 5.4e-06 25.9 0.6 1.5 1 1 0 1 1 1 1 KaiC HHH_2 PF12826.7 gi|21226559|ref|NP_632481.1| - 3.5e-06 27.0 0.2 7.4e-06 26.0 0.2 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif Cdd1 PF11731.8 gi|21226559|ref|NP_632481.1| - 0.00016 21.8 0.0 0.00043 20.5 0.0 1.7 1 1 0 1 1 1 1 Pathogenicity locus DNA_pol_lambd_f PF10391.9 gi|21226559|ref|NP_632481.1| - 0.00086 19.1 0.0 0.0033 17.2 0.0 2.0 1 1 1 2 2 2 1 Fingers domain of DNA polymerase lambda IMS_HHH PF11798.8 gi|21226559|ref|NP_632481.1| - 0.0018 18.5 0.0 0.0085 16.4 0.0 2.2 2 0 0 2 2 2 1 IMS family HHH motif AAA_22 PF13401.6 gi|21226559|ref|NP_632481.1| - 0.0027 18.0 0.0 0.0059 16.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain BAF PF02961.14 gi|21226559|ref|NP_632481.1| - 0.0041 17.5 0.0 0.034 14.6 0.0 2.2 2 0 0 2 2 2 1 Barrier to autointegration factor AAA_24 PF13479.6 gi|21226559|ref|NP_632481.1| - 0.0042 16.8 0.0 0.0081 15.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain HHH_8 PF14716.6 gi|21226559|ref|NP_632481.1| - 0.0056 17.0 0.2 0.36 11.2 0.0 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_3 PF12836.7 gi|21226559|ref|NP_632481.1| - 0.0084 16.4 0.2 2.9 8.2 0.1 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif LytR_C PF13399.6 gi|21226559|ref|NP_632481.1| - 0.053 14.5 0.2 0.88 10.6 0.2 2.4 3 0 0 3 3 2 0 LytR cell envelope-related transcriptional attenuator DUF4332 PF14229.6 gi|21226559|ref|NP_632481.1| - 0.085 13.1 0.0 0.23 11.7 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) AAA_18 PF13238.6 gi|21226559|ref|NP_632481.1| - 0.1 13.1 0.0 0.43 11.1 0.0 2.0 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|21226559|ref|NP_632481.1| - 0.13 12.2 0.0 0.27 11.1 0.0 1.5 1 1 0 1 1 1 0 NACHT domain ATPase_2 PF01637.18 gi|21226559|ref|NP_632481.1| - 0.14 12.0 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea CTP_transf_like PF01467.26 gi|21226560|ref|NP_632482.1| - 2.7e-12 47.1 0.0 3.2e-12 46.9 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|21226560|ref|NP_632482.1| - 0.12 12.2 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 FAD synthetase DUF3775 PF12616.8 gi|21226561|ref|NP_632483.1| - 0.081 13.0 0.4 0.13 12.3 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3775) AP_endonuc_2 PF01261.24 gi|21226562|ref|NP_632484.1| - 9.2e-20 71.0 0.0 1.1e-19 70.7 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF739 PF05339.11 gi|21226563|ref|NP_632485.1| - 0.051 13.7 0.5 0.52 10.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF739) AAA PF00004.29 gi|21226563|ref|NP_632485.1| - 0.23 11.9 0.2 0.23 11.9 0.2 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|21226564|ref|NP_632486.1| - 2.7e-32 112.2 0.0 4.2e-32 111.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21226564|ref|NP_632486.1| - 2.4e-12 47.3 0.6 2.8e-07 30.6 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21226564|ref|NP_632486.1| - 3.3e-07 30.0 0.0 6.2e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|21226564|ref|NP_632486.1| - 0.001 18.7 0.1 0.0021 17.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|21226564|ref|NP_632486.1| - 0.0035 17.3 0.0 0.0087 16.0 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 gi|21226564|ref|NP_632486.1| - 0.0041 16.9 0.3 0.012 15.3 0.1 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|21226564|ref|NP_632486.1| - 0.017 15.6 0.1 0.032 14.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|21226564|ref|NP_632486.1| - 0.047 13.2 0.0 0.12 11.9 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region Pr_beta_C PF12465.8 gi|21226564|ref|NP_632486.1| - 0.13 11.7 0.0 0.29 10.6 0.0 1.6 1 0 0 1 1 1 0 Proteasome beta subunits C terminal CbiQ PF02361.16 gi|21226565|ref|NP_632487.1| - 3.8e-44 150.9 10.8 3.8e-44 150.9 10.8 1.7 1 1 1 2 2 2 1 Cobalt transport protein OstA_2 PF13100.6 gi|21226565|ref|NP_632487.1| - 0.23 11.0 0.0 0.42 10.2 0.0 1.4 1 1 0 1 1 1 0 OstA-like protein CbiN PF02553.15 gi|21226566|ref|NP_632488.1| - 1.6e-24 85.7 0.2 1.9e-24 85.4 0.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN CbiM PF01891.16 gi|21226567|ref|NP_632489.1| - 6.4e-54 182.9 20.6 7.3e-54 182.7 20.6 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region SNARE_assoc PF09335.11 gi|21226568|ref|NP_632490.1| - 2e-16 60.5 5.4 2e-16 60.5 5.4 1.6 2 0 0 2 2 2 1 SNARE associated Golgi protein Sm_multidrug_ex PF06695.11 gi|21226568|ref|NP_632490.1| - 0.0012 19.4 0.6 0.0019 18.8 0.4 1.4 1 1 0 1 1 1 1 Putative small multi-drug export protein DUF4112 PF13430.6 gi|21226568|ref|NP_632490.1| - 0.12 12.6 1.2 0.25 11.6 0.3 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4112) S-layer PF07752.11 gi|21226569|ref|NP_632491.1| - 1.3e-200 663.5 18.3 4.9e-103 343.7 6.6 2.4 2 0 0 2 2 2 2 S-layer protein CARDB PF07705.11 gi|21226569|ref|NP_632491.1| - 6.7e-10 39.2 1.4 3.5e-09 36.8 1.4 2.3 1 0 0 1 1 1 1 CARDB CarboxypepD_reg PF13620.6 gi|21226569|ref|NP_632491.1| - 1.8e-07 31.3 12.4 3.8e-06 27.1 1.8 4.5 4 0 0 4 4 4 2 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|21226569|ref|NP_632491.1| - 1.1e-06 28.5 5.5 1.2e-05 25.2 0.2 4.1 4 1 0 4 4 4 1 CarboxypepD_reg-like domain YtkA PF13115.6 gi|21226569|ref|NP_632491.1| - 0.00054 20.5 6.2 0.092 13.4 0.0 3.9 4 1 0 4 4 4 1 YtkA-like tRNA-synt_1c_C PF03950.18 gi|21226569|ref|NP_632491.1| - 0.0053 16.7 0.1 1.6 8.6 0.0 3.6 4 0 0 4 4 4 1 tRNA synthetases class I (E and Q), anti-codon binding domain Big_7 PF17957.1 gi|21226569|ref|NP_632491.1| - 0.0059 17.4 24.3 0.053 14.3 3.1 5.7 6 0 0 6 6 5 2 Bacterial Ig domain Big_4 PF07532.11 gi|21226569|ref|NP_632491.1| - 0.0091 15.7 0.7 3.5 7.4 0.0 3.2 2 0 0 2 2 2 1 Bacterial Ig-like domain (group 4) DUF4198 PF10670.9 gi|21226569|ref|NP_632491.1| - 0.016 15.6 3.8 0.88 9.9 0.2 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4198) A2M PF00207.22 gi|21226569|ref|NP_632491.1| - 0.019 14.8 0.1 3.6 7.5 0.0 3.4 3 0 0 3 3 3 0 Alpha-2-macroglobulin family Cupredoxin_1 PF13473.6 gi|21226569|ref|NP_632491.1| - 0.021 14.9 1.8 0.45 10.6 0.2 3.4 4 1 1 5 5 4 0 Cupredoxin-like domain Gram_pos_anchor PF00746.21 gi|21226569|ref|NP_632491.1| - 0.056 13.4 0.1 0.14 12.1 0.1 1.7 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Y_Y_Y PF07495.13 gi|21226569|ref|NP_632491.1| - 0.081 12.9 0.6 6.1 6.9 0.0 3.4 3 0 0 3 3 3 0 Y_Y_Y domain ASH PF15780.5 gi|21226569|ref|NP_632491.1| - 0.41 10.9 1.8 3.4 7.9 0.8 2.9 3 0 0 3 3 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Fn3-like PF14310.6 gi|21226569|ref|NP_632491.1| - 0.44 10.7 3.0 3 8.0 0.2 3.1 3 1 1 4 4 3 0 Fibronectin type III-like domain Big_3_5 PF16640.5 gi|21226569|ref|NP_632491.1| - 1.4 9.1 17.3 0.12 12.5 5.3 3.7 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) CBM60 PF16841.5 gi|21226569|ref|NP_632491.1| - 4.4 7.8 6.9 1.3 9.5 0.2 3.5 5 0 0 5 5 4 0 Ca-dependent carbohydrate-binding module xylan-binding Vut_1 PF02592.15 gi|21226570|ref|NP_632492.1| - 1.7e-35 122.5 7.6 1.7e-35 122.5 7.6 2.0 2 0 0 2 2 2 1 Putative vitamin uptake transporter Tmpp129 PF10272.9 gi|21226570|ref|NP_632492.1| - 0.021 14.2 0.2 0.034 13.5 0.2 1.4 1 0 0 1 1 1 0 Putative transmembrane protein precursor DDDD PF10161.9 gi|21226570|ref|NP_632492.1| - 0.083 12.7 0.2 0.74 9.6 0.0 2.4 2 0 0 2 2 2 0 Putative mitochondrial precursor protein tRNA_NucTransf2 PF09249.11 gi|21226571|ref|NP_632493.1| - 1.6e-44 150.8 0.0 3.6e-44 149.6 0.0 1.6 2 0 0 2 2 2 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|21226571|ref|NP_632493.1| - 4.2e-11 43.0 0.0 2.3e-10 40.6 0.0 2.4 1 1 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|21226571|ref|NP_632493.1| - 0.019 15.1 0.0 0.056 13.6 0.0 1.7 1 1 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain DNA_pol_B_palm PF14792.6 gi|21226571|ref|NP_632493.1| - 0.052 13.7 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 DNA polymerase beta palm ETRAMP PF09716.10 gi|21226572|ref|NP_632494.1| - 0.55 10.3 3.2 0.5 10.5 1.2 2.1 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) OGG_N PF07934.12 gi|21226573|ref|NP_632495.1| - 8.6e-21 74.3 0.8 9.7e-20 70.9 0.8 2.3 1 1 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.25 gi|21226573|ref|NP_632495.1| - 2.7e-07 31.0 0.0 6.7e-07 29.7 0.0 1.6 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|21226573|ref|NP_632495.1| - 0.0088 15.9 0.0 0.02 14.8 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif ADP_PFK_GK PF04587.15 gi|21226574|ref|NP_632496.1| - 5.1e-82 275.7 0.0 6.4e-81 272.1 0.0 2.3 1 1 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region ADP_PFK_GK PF04587.15 gi|21226575|ref|NP_632497.1| - 8.1e-111 370.6 0.0 9.2e-111 370.4 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region ArgJ PF01960.18 gi|21226576|ref|NP_632498.1| - 5.5e-136 453.2 2.6 6.4e-136 453.0 2.6 1.0 1 0 0 1 1 1 1 ArgJ family CBS PF00571.28 gi|21226577|ref|NP_632499.1| - 1.2e-34 118.5 2.4 1e-16 61.1 0.1 2.2 2 0 0 2 2 2 2 CBS domain Peptidase_S55 PF05580.12 gi|21226577|ref|NP_632499.1| - 0.021 14.8 0.1 0.41 10.6 0.0 2.2 2 0 0 2 2 2 0 SpoIVB peptidase S55 Semialdhyde_dh PF01118.24 gi|21226578|ref|NP_632500.1| - 2.3e-31 108.7 0.0 3.6e-31 108.1 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|21226578|ref|NP_632500.1| - 1.7e-24 86.9 0.0 2.2e-24 86.5 0.0 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.22 gi|21226578|ref|NP_632500.1| - 0.023 15.5 0.0 0.089 13.6 0.0 1.9 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Pilin_N PF07790.11 gi|21226579|ref|NP_632501.1| - 3.9e-08 34.1 0.1 7.5e-08 33.2 0.1 1.5 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Nuc_deoxyrib_tr PF05014.15 gi|21226580|ref|NP_632502.1| - 1.6e-29 102.6 0.1 1.8e-29 102.4 0.1 1.0 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase Nuc_deoxyri_tr2 PF15891.5 gi|21226580|ref|NP_632502.1| - 1e-19 70.9 0.0 1.4e-19 70.4 0.0 1.2 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase like LDcluster4 PF18306.1 gi|21226580|ref|NP_632502.1| - 0.0016 18.1 0.0 0.0025 17.4 0.0 1.3 1 0 0 1 1 1 1 SLOG cluster4 family TIR_2 PF13676.6 gi|21226580|ref|NP_632502.1| - 0.0085 16.7 0.0 0.02 15.5 0.0 1.6 1 1 0 1 1 1 1 TIR domain Nuc_deoxyri_tr3 PF11071.8 gi|21226580|ref|NP_632502.1| - 0.036 14.1 0.0 0.045 13.8 0.0 1.3 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase YtoQ DUF4406 PF14359.6 gi|21226580|ref|NP_632502.1| - 0.044 14.3 0.0 0.073 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4406) Transferrin PF00405.17 gi|21226580|ref|NP_632502.1| - 0.086 12.0 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Transferrin Mn_catalase PF05067.12 gi|21226580|ref|NP_632502.1| - 0.1 11.6 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Manganese containing catalase Acetyltransf_7 PF13508.7 gi|21226583|ref|NP_632505.1| - 2.8e-13 50.1 0.2 4.5e-13 49.4 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21226583|ref|NP_632505.1| - 9.3e-13 48.2 0.1 1.9e-12 47.2 0.1 1.4 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21226583|ref|NP_632505.1| - 2.7e-11 43.7 0.1 4e-11 43.2 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|21226583|ref|NP_632505.1| - 0.0083 16.8 0.0 0.012 16.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21226583|ref|NP_632505.1| - 0.0087 16.0 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|21226583|ref|NP_632505.1| - 0.01 15.9 0.0 0.23 11.5 0.0 2.2 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain HSP20 PF00011.21 gi|21226585|ref|NP_632507.1| - 5.7e-22 77.8 0.9 7.2e-22 77.5 0.9 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|21226585|ref|NP_632507.1| - 3.2e-12 45.8 0.0 4.4e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|21226585|ref|NP_632507.1| - 0.00042 21.3 0.0 0.00068 20.6 0.0 1.3 1 0 0 1 1 1 1 CS domain FKBP26_C PF18046.1 gi|21226585|ref|NP_632507.1| - 0.062 13.4 0.6 8.9 6.5 0.1 2.4 2 0 0 2 2 2 0 FKBP26_C-terminal AMMECR1 PF01871.17 gi|21226586|ref|NP_632508.1| - 1.2e-48 164.9 0.0 1.3e-48 164.7 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 PGK PF00162.19 gi|21226587|ref|NP_632509.1| - 2.9e-110 368.8 1.1 3.3e-110 368.6 1.1 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase UDG PF03167.19 gi|21226588|ref|NP_632510.1| - 1.5e-38 132.2 0.0 1.9e-38 131.9 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily HSP20 PF00011.21 gi|21226589|ref|NP_632511.1| - 3.3e-06 27.2 0.7 3.5e-05 23.9 0.7 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family Fer4 PF00037.27 gi|21226590|ref|NP_632512.1| - 8.8e-12 44.3 14.7 4.7e-07 29.4 6.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21226590|ref|NP_632512.1| - 1.2e-10 41.3 8.4 1.6e-10 41.0 8.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21226590|ref|NP_632512.1| - 3.9e-10 39.4 13.7 3.8e-05 23.6 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21226590|ref|NP_632512.1| - 1.4e-09 38.4 8.3 1.9e-09 38.0 8.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21226590|ref|NP_632512.1| - 2.1e-09 37.4 8.2 2.5e-09 37.1 8.2 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21226590|ref|NP_632512.1| - 7.3e-09 35.2 11.4 0.00025 20.9 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21226590|ref|NP_632512.1| - 3.3e-07 30.3 10.1 6.4e-07 29.4 10.1 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21226590|ref|NP_632512.1| - 2.3e-06 28.4 8.2 0.00036 21.4 3.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|21226590|ref|NP_632512.1| - 8.5e-06 25.9 7.4 0.00029 21.1 2.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21226590|ref|NP_632512.1| - 1.2e-05 25.9 12.1 0.00037 21.2 3.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain ETF_QO PF05187.13 gi|21226590|ref|NP_632512.1| - 0.00048 20.2 3.4 0.00055 20.0 3.4 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_13 PF13370.6 gi|21226590|ref|NP_632512.1| - 0.00052 20.5 13.3 0.017 15.7 13.3 2.1 1 1 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|21226590|ref|NP_632512.1| - 0.0006 20.2 11.0 0.082 13.4 4.6 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226590|ref|NP_632512.1| - 0.00086 19.8 11.3 0.01 16.4 3.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21226590|ref|NP_632512.1| - 0.0028 18.4 11.4 0.027 15.2 0.2 2.5 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|21226590|ref|NP_632512.1| - 0.013 15.7 9.3 0.048 13.8 4.3 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21226591|ref|NP_632513.1| - 1.8e-10 40.2 10.3 2.2e-08 33.5 5.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21226591|ref|NP_632513.1| - 1.7e-09 38.1 10.1 2e-09 37.9 10.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21226591|ref|NP_632513.1| - 9.9e-09 35.2 8.2 1.1e-08 35.1 8.2 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21226591|ref|NP_632513.1| - 1.4e-07 32.4 7.2 2.5e-05 25.1 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|21226591|ref|NP_632513.1| - 3.6e-07 30.2 8.1 4.3e-07 30.0 8.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21226591|ref|NP_632513.1| - 7.9e-07 29.1 9.9 1.3e-06 28.4 10.0 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21226591|ref|NP_632513.1| - 1.5e-06 28.7 11.8 8.5e-05 23.2 4.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21226591|ref|NP_632513.1| - 3.1e-06 27.0 13.0 8.5e-05 22.5 6.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21226591|ref|NP_632513.1| - 7.2e-05 23.0 11.2 0.0041 17.5 5.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21226591|ref|NP_632513.1| - 0.00038 20.4 12.5 0.00087 19.2 4.9 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21226591|ref|NP_632513.1| - 0.00041 20.5 4.2 0.00041 20.5 4.2 1.8 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226591|ref|NP_632513.1| - 0.0013 19.3 2.9 0.0013 19.3 2.9 2.0 1 1 1 2 2 2 1 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|21226591|ref|NP_632513.1| - 0.011 15.9 3.0 0.012 15.7 3.0 1.1 1 0 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_13 PF13370.6 gi|21226591|ref|NP_632513.1| - 0.012 16.2 11.5 0.36 11.4 11.5 2.3 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|21226591|ref|NP_632513.1| - 0.03 14.8 11.1 0.33 11.4 11.1 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21226591|ref|NP_632513.1| - 0.16 12.8 5.0 0.17 12.8 1.3 2.0 2 0 0 2 2 2 0 4Fe-4S dicluster domain PAR1 PF06521.11 gi|21226591|ref|NP_632513.1| - 0.48 10.1 7.9 2.1 8.0 1.7 2.0 1 1 1 2 2 2 0 PAR1 protein HEAT_2 PF13646.6 gi|21226592|ref|NP_632514.1| - 5.2e-103 337.6 32.2 8.1e-23 80.6 0.8 6.7 1 1 7 8 8 8 8 HEAT repeats HEAT_PBS PF03130.16 gi|21226592|ref|NP_632514.1| - 6.1e-54 175.2 17.5 0.0001 22.7 0.2 12.3 12 0 0 12 12 12 10 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|21226592|ref|NP_632514.1| - 2.9e-46 151.5 0.3 0.00021 21.3 0.0 11.9 12 0 0 12 12 12 7 HEAT repeat HEAT_EZ PF13513.6 gi|21226592|ref|NP_632514.1| - 3.9e-37 126.2 11.9 9.9e-05 22.8 0.1 10.9 8 4 4 12 12 12 7 HEAT-like repeat Arm PF00514.23 gi|21226592|ref|NP_632514.1| - 4.6e-22 77.3 0.1 0.0033 17.4 0.0 9.8 7 4 4 11 11 11 5 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|21226592|ref|NP_632514.1| - 8.8e-16 58.4 0.0 0.0025 17.9 0.0 6.2 2 2 4 7 7 7 4 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|21226592|ref|NP_632514.1| - 3e-10 39.3 0.0 4.7e-05 22.2 0.0 2.9 2 1 0 2 2 2 2 Adaptin N terminal region ERAP1_C PF11838.8 gi|21226592|ref|NP_632514.1| - 9.9e-07 28.6 0.0 0.00093 18.8 0.0 3.4 1 1 2 3 3 3 2 ERAP1-like C-terminal domain Aconitase_B_N PF11791.8 gi|21226592|ref|NP_632514.1| - 6e-06 26.4 0.0 6.2 6.9 0.0 6.2 4 2 3 7 7 7 1 Aconitate B N-terminal domain Vitellogenin_N PF01347.22 gi|21226592|ref|NP_632514.1| - 0.00012 20.6 0.0 0.52 8.6 0.0 3.9 3 1 1 4 4 4 1 Lipoprotein amino terminal region ALF PF03752.13 gi|21226592|ref|NP_632514.1| - 0.00014 21.7 0.2 4.1 7.4 0.0 5.1 5 0 0 5 5 5 1 Short repeats of unknown function CLASP_N PF12348.8 gi|21226592|ref|NP_632514.1| - 0.00031 20.4 0.0 6.9 6.2 0.0 4.4 4 1 0 4 4 4 1 CLASP N terminal RasGEF_N_2 PF14663.6 gi|21226592|ref|NP_632514.1| - 0.00034 21.0 0.1 72 3.8 0.0 5.9 4 3 3 7 7 7 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain IFRD PF05004.13 gi|21226592|ref|NP_632514.1| - 0.0016 17.6 0.8 2.1 7.4 0.0 5.1 2 2 4 7 7 7 1 Interferon-related developmental regulator (IFRD) UPF0147 PF03685.13 gi|21226592|ref|NP_632514.1| - 0.0059 16.6 0.2 0.28 11.3 0.0 3.8 4 0 0 4 4 4 1 Uncharacterised protein family (UPF0147) V-ATPase_H_C PF11698.8 gi|21226592|ref|NP_632514.1| - 0.016 15.3 0.0 14 5.9 0.0 3.9 2 1 1 3 3 3 0 V-ATPase subunit H DNA_alkylation PF08713.11 gi|21226592|ref|NP_632514.1| - 0.055 13.2 0.0 0.72 9.5 0.0 2.9 1 1 0 2 2 2 0 DNA alkylation repair enzyme Gp49 PF05973.14 gi|21226592|ref|NP_632514.1| - 0.13 12.4 0.0 4.5 7.5 0.0 3.1 3 0 0 3 3 3 0 Phage derived protein Gp49-like (DUF891) AFOR_N PF02730.15 gi|21226592|ref|NP_632514.1| - 0.13 12.1 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, N-terminal domain API5 PF05918.11 gi|21226592|ref|NP_632514.1| - 0.39 9.5 0.7 53 2.4 0.1 3.6 4 1 1 5 5 5 0 Apoptosis inhibitory protein 5 (API5) MarR_2 PF12802.7 gi|21226594|ref|NP_632516.1| - 0.0033 17.3 0.0 0.0069 16.3 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|21226594|ref|NP_632516.1| - 0.0054 16.5 0.0 0.05 13.4 0.0 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR PF01047.22 gi|21226594|ref|NP_632516.1| - 0.0086 16.0 0.1 0.015 15.2 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|21226594|ref|NP_632516.1| - 0.011 15.7 0.1 0.019 14.9 0.1 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|21226594|ref|NP_632516.1| - 0.019 14.8 0.0 0.04 13.8 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|21226594|ref|NP_632516.1| - 0.019 14.5 0.3 0.051 13.1 0.3 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding B-block_TFIIIC PF04182.12 gi|21226594|ref|NP_632516.1| - 0.051 13.7 0.1 0.094 12.9 0.1 1.5 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC GntR PF00392.21 gi|21226594|ref|NP_632516.1| - 0.073 12.7 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_53 PF18606.1 gi|21226594|ref|NP_632516.1| - 0.087 12.5 0.0 0.2 11.3 0.0 1.6 1 0 0 1 1 1 0 Zap helix turn helix N-terminal domain ATP-grasp_5 PF13549.6 gi|21226595|ref|NP_632517.1| - 2.9e-81 272.2 0.2 3.4e-81 271.9 0.2 1.0 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|21226595|ref|NP_632517.1| - 0.00074 19.1 0.5 0.0022 17.6 0.5 1.8 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|21226595|ref|NP_632517.1| - 0.011 15.3 0.1 0.019 14.5 0.1 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain zf-CCCH_2 PF14608.6 gi|21226596|ref|NP_632518.1| - 0.043 14.3 0.7 0.064 13.8 0.7 1.3 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Acetate_kinase PF00871.17 gi|21226597|ref|NP_632519.1| - 2.7e-160 533.4 0.9 3e-160 533.2 0.9 1.0 1 0 0 1 1 1 1 Acetokinase family ROK PF00480.20 gi|21226597|ref|NP_632519.1| - 0.038 13.5 0.3 0.08 12.4 0.3 1.6 1 1 0 1 1 1 0 ROK family DUF211 PF02680.14 gi|21226597|ref|NP_632519.1| - 0.11 12.7 2.6 1.6 9.0 0.3 2.8 2 1 0 2 2 2 0 Uncharacterized ArCR, COG1888 PTA_PTB PF01515.19 gi|21226598|ref|NP_632520.1| - 2e-129 431.5 4.7 2.3e-129 431.3 4.7 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase DUF3663 PF12404.8 gi|21226598|ref|NP_632520.1| - 0.049 13.7 0.2 0.12 12.4 0.1 1.7 2 0 0 2 2 2 0 Peptidase LpxI_N PF17930.1 gi|21226598|ref|NP_632520.1| - 0.055 13.4 0.1 0.1 12.5 0.1 1.5 1 0 0 1 1 1 0 LpxI N-terminal domain Rotavirus_VP3 PF06929.11 gi|21226598|ref|NP_632520.1| - 0.15 10.3 0.0 0.2 9.9 0.0 1.1 1 0 0 1 1 1 0 Rotavirus VP3 protein FMN_red PF03358.15 gi|21226599|ref|NP_632521.1| - 3.6e-39 134.0 0.0 4.4e-39 133.7 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21226599|ref|NP_632521.1| - 3.1e-13 49.9 0.0 4.2e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|21226599|ref|NP_632521.1| - 0.013 15.8 0.0 0.018 15.3 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|21226599|ref|NP_632521.1| - 0.096 12.9 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin Voltage_CLC PF00654.20 gi|21226600|ref|NP_632522.1| - 2e-85 287.1 40.2 2.2e-84 283.7 33.2 2.0 1 1 1 2 2 2 2 Voltage gated chloride channel CBS PF00571.28 gi|21226600|ref|NP_632522.1| - 2.2e-22 79.3 0.5 2.6e-10 40.6 0.1 2.6 2 0 0 2 2 2 2 CBS domain CMD PF02627.20 gi|21226601|ref|NP_632523.1| - 3.5e-15 55.8 0.0 4.4e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Pinin_SDK_memA PF04696.13 gi|21226601|ref|NP_632523.1| - 0.035 14.2 0.0 0.044 13.8 0.0 1.1 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region AHSA1 PF08327.11 gi|21226602|ref|NP_632524.1| - 6.5e-25 87.8 0.0 7.9e-25 87.5 0.0 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 gi|21226602|ref|NP_632524.1| - 0.018 15.3 0.0 0.033 14.5 0.0 1.5 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport 3-dmu-9_3-mt PF06983.13 gi|21226603|ref|NP_632525.1| - 1.4e-47 161.0 0.1 1.8e-47 160.7 0.1 1.1 1 0 0 1 1 1 1 3-demethylubiquinone-9 3-methyltransferase Ribonuc_L-PSP PF01042.21 gi|21226604|ref|NP_632526.1| - 2.1e-17 63.3 0.1 2.8e-17 62.9 0.1 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP CPBP PF02517.16 gi|21226605|ref|NP_632527.1| - 4.2e-09 36.6 8.8 4.2e-09 36.6 8.8 2.2 3 0 0 3 3 3 1 CPBP intramembrane metalloprotease DUF4260 PF14079.6 gi|21226605|ref|NP_632527.1| - 0.074 13.0 0.4 0.074 13.0 0.4 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4260) DUF2953 PF11167.8 gi|21226605|ref|NP_632527.1| - 0.64 10.1 0.1 0.64 10.1 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2953) HEAT_2 PF13646.6 gi|21226606|ref|NP_632528.1| - 3e-126 412.1 65.8 3.1e-18 66.0 0.2 9.5 1 1 11 12 12 12 12 HEAT repeats HEAT PF02985.22 gi|21226606|ref|NP_632528.1| - 4.8e-59 191.3 10.7 7.2e-06 25.8 0.0 17.2 17 0 0 17 17 17 11 HEAT repeat HEAT_PBS PF03130.16 gi|21226606|ref|NP_632528.1| - 7.8e-59 190.4 50.1 0.0011 19.4 0.1 18.1 18 0 0 18 18 18 14 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 gi|21226606|ref|NP_632528.1| - 1.2e-31 108.7 31.8 0.00024 21.5 0.0 15.1 12 4 4 16 16 16 8 HEAT-like repeat Cnd1 PF12717.7 gi|21226606|ref|NP_632528.1| - 2.1e-20 73.4 8.2 0.0044 17.1 0.0 8.9 3 1 6 9 9 9 5 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|21226606|ref|NP_632528.1| - 4.3e-17 61.9 2.8 0.00084 18.0 0.0 6.4 1 1 3 6 6 6 4 Adaptin N terminal region Arm PF00514.23 gi|21226606|ref|NP_632528.1| - 4.2e-13 48.8 3.9 1.3 9.2 0.0 12.8 12 3 4 16 16 14 2 Armadillo/beta-catenin-like repeat RTP1_C1 PF10363.9 gi|21226606|ref|NP_632528.1| - 8.6e-13 48.5 0.0 0.95 9.7 0.0 8.4 2 2 5 7 7 7 2 Required for nuclear transport of RNA pol II C-terminus 1 Vac14_Fab1_bd PF12755.7 gi|21226606|ref|NP_632528.1| - 3e-12 47.0 0.0 0.3 11.7 0.0 8.9 4 2 4 10 10 10 1 Vacuolar 14 Fab1-binding region Aconitase_B_N PF11791.8 gi|21226606|ref|NP_632528.1| - 1.6e-08 34.8 9.3 2.6 8.1 0.2 7.4 4 2 3 8 8 7 3 Aconitate B N-terminal domain NACHT PF05729.12 gi|21226606|ref|NP_632528.1| - 4.1e-08 33.3 0.0 1.6e-07 31.4 0.0 2.0 2 0 0 2 2 2 1 NACHT domain CLASP_N PF12348.8 gi|21226606|ref|NP_632528.1| - 1.5e-05 24.7 0.1 0.12 11.9 0.0 3.6 2 1 1 3 3 3 2 CLASP N terminal RasGEF_N_2 PF14663.6 gi|21226606|ref|NP_632528.1| - 0.00014 22.2 6.7 0.67 10.4 0.1 6.6 5 2 3 8 8 7 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain DNA_alkylation PF08713.11 gi|21226606|ref|NP_632528.1| - 0.00021 21.1 5.6 0.16 11.7 0.2 3.7 3 0 0 3 3 3 1 DNA alkylation repair enzyme AAA_22 PF13401.6 gi|21226606|ref|NP_632528.1| - 0.00045 20.5 0.0 0.0022 18.3 0.0 2.2 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 gi|21226606|ref|NP_632528.1| - 0.0013 18.3 0.0 0.0027 17.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region API5 PF05918.11 gi|21226606|ref|NP_632528.1| - 0.0019 17.1 4.5 3.2 6.4 0.2 3.9 3 1 1 4 4 4 2 Apoptosis inhibitory protein 5 (API5) Mlh1_C PF16413.5 gi|21226606|ref|NP_632528.1| - 0.034 13.5 0.0 0.072 12.5 0.0 1.4 1 0 0 1 1 1 0 DNA mismatch repair protein Mlh1 C-terminus AAA_19 PF13245.6 gi|21226606|ref|NP_632528.1| - 0.047 14.0 0.0 2.2 8.6 0.0 2.7 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|21226606|ref|NP_632528.1| - 0.048 13.0 0.0 0.13 11.6 0.0 1.7 1 0 0 1 1 1 0 FtsK/SpoIIIE family Microtub_bd PF16796.5 gi|21226606|ref|NP_632528.1| - 0.1 12.5 0.0 0.53 10.2 0.0 2.2 2 0 0 2 2 2 0 Microtubule binding AAA_16 PF13191.6 gi|21226606|ref|NP_632528.1| - 0.73 10.2 6.8 1.3 9.4 0.0 3.9 3 1 1 4 4 3 0 AAA ATPase domain DUF2019 PF09450.10 gi|21226606|ref|NP_632528.1| - 2.8 7.9 7.7 15 5.6 0.1 5.1 3 2 1 5 5 5 0 Domain of unknown function (DUF2019) URO-D PF01208.17 gi|21226607|ref|NP_632529.1| - 4.6e-82 275.9 0.0 5.2e-82 275.8 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Cupin_2 PF07883.11 gi|21226608|ref|NP_632530.1| - 2.4e-15 56.0 0.0 3.7e-15 55.4 0.0 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|21226608|ref|NP_632530.1| - 4.1e-07 29.7 0.0 5e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.19 gi|21226608|ref|NP_632530.1| - 1.1e-06 28.6 0.0 1.4e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|21226608|ref|NP_632530.1| - 2.7e-05 24.1 0.0 3.2e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Ectoine_synth PF06339.12 gi|21226608|ref|NP_632530.1| - 0.00023 21.4 0.1 0.0003 21.0 0.1 1.1 1 0 0 1 1 1 1 Ectoine synthase Cupin_3 PF05899.12 gi|21226608|ref|NP_632530.1| - 0.00051 19.7 0.0 0.00074 19.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Auxin_BP PF02041.16 gi|21226608|ref|NP_632530.1| - 0.012 15.3 0.0 0.026 14.2 0.0 1.5 1 1 0 1 1 1 0 Auxin binding protein GPI PF06560.11 gi|21226608|ref|NP_632530.1| - 0.022 14.0 0.0 0.033 13.4 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) PHP_C PF13263.6 gi|21226610|ref|NP_632532.1| - 8.7e-23 79.8 0.1 3.5e-22 77.9 0.1 1.9 2 0 0 2 2 2 1 PHP-associated PHP PF02811.19 gi|21226610|ref|NP_632532.1| - 3.4e-08 34.0 0.0 2.7e-07 31.0 0.0 2.0 1 1 0 1 1 1 1 PHP domain Milton PF12448.8 gi|21226610|ref|NP_632532.1| - 0.15 12.1 0.0 15 5.6 0.0 2.2 2 0 0 2 2 2 0 Kinesin associated protein DUF4277 PF14104.6 gi|21226611|ref|NP_632533.1| - 1.8e-38 131.2 0.0 3.6e-38 130.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|21226611|ref|NP_632533.1| - 2.2e-12 47.1 0.4 5.1e-11 42.6 0.4 2.2 1 1 0 1 1 1 1 Transposase DDE domain ArgoMid PF16487.5 gi|21226611|ref|NP_632533.1| - 0.099 12.9 0.3 8 6.8 0.0 3.0 3 0 0 3 3 3 0 Mid domain of argonaute MMR_HSR1 PF01926.23 gi|21226612|ref|NP_632534.1| - 9.7e-21 74.0 0.0 1.9e-20 73.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|21226612|ref|NP_632534.1| - 1.2e-13 51.4 1.6 2.3e-13 50.5 1.6 1.5 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region GTP-bdg_N PF13167.6 gi|21226612|ref|NP_632534.1| - 3.4e-09 37.2 0.1 8.4e-09 36.0 0.1 1.7 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal RsgA_GTPase PF03193.16 gi|21226612|ref|NP_632534.1| - 4.2e-09 36.5 0.1 0.0003 20.7 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1_Xtn PF16897.5 gi|21226612|ref|NP_632534.1| - 4.4e-09 36.3 0.0 8.1e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain GTP_EFTU PF00009.27 gi|21226612|ref|NP_632534.1| - 5.2e-08 32.7 0.0 1.7e-05 24.4 0.0 2.6 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 gi|21226612|ref|NP_632534.1| - 7.7e-08 32.0 0.4 3.3e-07 30.0 0.4 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B cobW PF02492.19 gi|21226612|ref|NP_632534.1| - 0.00017 21.2 0.4 0.041 13.5 0.0 2.7 2 1 1 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 gi|21226612|ref|NP_632534.1| - 0.0021 18.1 0.1 0.0079 16.3 0.0 1.9 1 1 1 2 2 2 1 Dynamin family PduV-EutP PF10662.9 gi|21226612|ref|NP_632534.1| - 0.0067 16.2 0.0 0.53 10.0 0.0 2.3 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Arf PF00025.21 gi|21226612|ref|NP_632534.1| - 0.0092 15.4 0.1 0.03 13.8 0.1 1.9 1 1 0 1 1 1 1 ADP-ribosylation factor family MnmE_helical PF12631.7 gi|21226612|ref|NP_632534.1| - 0.022 15.0 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 MnmE helical domain ABC_tran PF00005.27 gi|21226612|ref|NP_632534.1| - 0.03 14.8 0.1 0.093 13.2 0.0 2.1 1 1 1 2 2 2 0 ABC transporter NOG1 PF06858.14 gi|21226612|ref|NP_632534.1| - 0.034 13.9 0.3 0.38 10.6 0.0 2.5 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) AAA_29 PF13555.6 gi|21226612|ref|NP_632534.1| - 0.12 12.1 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Roc PF08477.13 gi|21226612|ref|NP_632534.1| - 0.13 12.5 0.0 9.1 6.5 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Fzo_mitofusin PF04799.13 gi|21226612|ref|NP_632534.1| - 0.16 11.5 0.1 9.5 5.7 0.0 2.2 1 1 1 2 2 2 0 fzo-like conserved region AAA_23 PF13476.6 gi|21226612|ref|NP_632534.1| - 0.33 11.4 3.9 0.47 10.9 0.2 2.3 1 1 1 2 2 2 0 AAA domain DUF2209 PF09974.9 gi|21226613|ref|NP_632535.1| - 5.8e-52 175.1 0.0 6.7e-52 174.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2209) tRNA_int_endo PF01974.17 gi|21226614|ref|NP_632536.1| - 1.4e-49 166.0 3.3 4.4e-26 90.8 0.6 2.3 2 0 0 2 2 2 2 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|21226614|ref|NP_632536.1| - 2.7e-42 142.3 2.2 2e-21 75.4 0.0 2.6 2 0 0 2 2 2 2 tRNA intron endonuclease, N-terminal domain tRNA_int_end_N2 PF12928.7 gi|21226614|ref|NP_632536.1| - 0.023 14.9 0.3 2.7 8.2 0.0 2.6 2 1 0 2 2 2 0 tRNA-splicing endonuclease subunit sen54 N-term Sen15 PF09631.10 gi|21226614|ref|NP_632536.1| - 0.06 13.6 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Sen15 protein Nmad4 PF18756.1 gi|21226614|ref|NP_632536.1| - 0.14 12.5 0.1 3 8.3 0.0 2.4 1 1 1 2 2 2 0 Nucleotide modification associated domain 4 GATase_3 PF07685.14 gi|21226615|ref|NP_632537.1| - 4.8e-44 150.3 0.0 8e-44 149.6 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|21226615|ref|NP_632537.1| - 7.4e-19 68.3 0.1 3.6e-12 46.5 0.0 2.3 1 1 1 2 2 2 2 AAA domain CbiA PF01656.23 gi|21226615|ref|NP_632537.1| - 1.1e-18 67.5 0.0 2e-18 66.7 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF2620 PF10941.8 gi|21226615|ref|NP_632537.1| - 0.013 15.6 0.1 0.026 14.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF2620 MobB PF03205.14 gi|21226615|ref|NP_632537.1| - 0.038 13.9 0.0 0.083 12.8 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B MipZ PF09140.11 gi|21226615|ref|NP_632537.1| - 0.17 11.2 0.0 0.24 10.6 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ Fer4_NifH PF00142.18 gi|21226616|ref|NP_632538.1| - 1.2e-88 297.1 1.4 1.4e-88 296.9 1.4 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|21226616|ref|NP_632538.1| - 9.8e-12 45.0 0.0 1.8e-11 44.2 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|21226616|ref|NP_632538.1| - 9.5e-11 41.6 0.2 5.3e-10 39.2 0.2 2.0 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|21226616|ref|NP_632538.1| - 6.8e-10 39.1 0.2 2.6e-09 37.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|21226616|ref|NP_632538.1| - 7e-09 35.3 0.8 1.5e-07 30.9 0.5 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 gi|21226616|ref|NP_632538.1| - 4.8e-05 22.8 0.1 0.0045 16.3 0.0 2.2 2 0 0 2 2 2 1 ATPase MipZ AAA_24 PF13479.6 gi|21226616|ref|NP_632538.1| - 6e-05 22.9 0.0 9.3e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|21226616|ref|NP_632538.1| - 0.00021 20.4 0.1 0.00033 19.7 0.1 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|21226616|ref|NP_632538.1| - 0.0013 18.4 0.1 0.0024 17.5 0.1 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_25 PF13481.6 gi|21226616|ref|NP_632538.1| - 0.0078 15.8 0.1 0.016 14.8 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|21226616|ref|NP_632538.1| - 0.014 15.6 0.1 0.047 14.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|21226616|ref|NP_632538.1| - 0.021 15.2 0.1 0.041 14.3 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain ATP_bind_1 PF03029.17 gi|21226616|ref|NP_632538.1| - 0.027 14.3 0.3 0.33 10.7 0.3 2.3 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 gi|21226616|ref|NP_632538.1| - 0.034 13.9 0.1 0.58 9.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|21226616|ref|NP_632538.1| - 0.08 12.1 0.2 0.13 11.4 0.2 1.3 1 0 0 1 1 1 0 NB-ARC domain ATPase PF06745.13 gi|21226616|ref|NP_632538.1| - 0.13 11.6 0.1 0.66 9.3 0.1 1.9 2 0 0 2 2 2 0 KaiC RNA_helicase PF00910.22 gi|21226616|ref|NP_632538.1| - 0.16 12.4 0.0 0.37 11.2 0.0 1.7 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 gi|21226616|ref|NP_632538.1| - 0.2 11.3 0.3 0.32 10.7 0.3 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein Oxidored_nitro PF00148.19 gi|21226617|ref|NP_632539.1| - 5.7e-18 64.8 0.1 7.3e-18 64.5 0.1 1.3 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase GvpG PF05120.12 gi|21226617|ref|NP_632539.1| - 0.0028 17.6 0.1 0.0056 16.7 0.1 1.5 1 0 0 1 1 1 1 Gas vesicle protein G Mur_ligase_M PF08245.12 gi|21226618|ref|NP_632540.1| - 2.2e-05 24.5 0.0 7.6e-05 22.8 0.0 1.9 1 1 0 1 1 1 1 Mur ligase middle domain CbiX PF01903.17 gi|21226619|ref|NP_632541.1| - 8.3e-29 100.1 0.0 9.5e-29 99.9 0.0 1.0 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|21226619|ref|NP_632541.1| - 1e-07 31.6 0.0 1.2e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|21226619|ref|NP_632541.1| - 0.013 14.6 0.0 0.017 14.2 0.0 1.1 1 0 0 1 1 1 0 Ferrochelatase PAS_9 PF13426.7 gi|21226620|ref|NP_632542.1| - 3.1e-40 136.6 3.7 3.4e-16 59.4 0.0 4.6 5 1 0 5 5 5 3 PAS domain PAS_3 PF08447.12 gi|21226620|ref|NP_632542.1| - 4.8e-39 132.5 0.1 5.5e-19 68.3 0.0 3.7 3 0 0 3 3 3 3 PAS fold PAS PF00989.25 gi|21226620|ref|NP_632542.1| - 1.5e-38 131.2 0.0 2.3e-16 59.8 0.0 4.6 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.10 gi|21226620|ref|NP_632542.1| - 1.4e-34 118.6 0.0 5.8e-16 58.7 0.0 3.6 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.12 gi|21226620|ref|NP_632542.1| - 9.7e-29 99.3 1.0 9.7e-29 99.3 1.0 2.8 4 0 0 4 4 3 1 Histidine kinase GAF_3 PF13492.6 gi|21226620|ref|NP_632542.1| - 9.2e-19 68.1 0.0 2e-18 67.0 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_8 PF13188.7 gi|21226620|ref|NP_632542.1| - 6.6e-16 57.9 0.0 7.7e-10 38.6 0.0 3.2 3 0 0 3 3 3 2 PAS domain GAF PF01590.26 gi|21226620|ref|NP_632542.1| - 2.9e-11 44.1 0.0 8.9e-11 42.6 0.0 1.9 2 0 0 2 2 2 1 GAF domain GAF_2 PF13185.6 gi|21226620|ref|NP_632542.1| - 4.7e-11 43.1 0.0 1.7e-10 41.4 0.0 2.0 2 1 0 2 2 2 1 GAF domain HATPase_c PF02518.26 gi|21226620|ref|NP_632542.1| - 1.2e-09 38.6 0.7 7.8e-09 36.0 0.2 2.6 2 1 0 2 2 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.7 gi|21226620|ref|NP_632542.1| - 1.5e-08 34.8 2.1 0.0015 18.7 0.0 4.7 5 0 0 5 5 5 2 PAS fold PAS_10 PF13596.6 gi|21226620|ref|NP_632542.1| - 0.00019 22.0 0.8 0.47 11.1 0.1 3.3 4 0 0 4 4 2 2 PAS domain HWE_HK PF07536.14 gi|21226620|ref|NP_632542.1| - 0.019 15.7 0.6 0.048 14.4 0.1 2.0 2 0 0 2 2 1 0 HWE histidine kinase ZT_dimer PF16916.5 gi|21226620|ref|NP_632542.1| - 0.026 14.7 3.0 0.042 14.0 0.1 3.0 3 0 0 3 3 3 0 Dimerisation domain of Zinc Transporter HATPase_c_2 PF13581.6 gi|21226620|ref|NP_632542.1| - 0.034 14.1 0.0 0.094 12.7 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain PAS_12 PF18095.1 gi|21226620|ref|NP_632542.1| - 0.036 13.7 0.2 0.19 11.3 0.1 2.3 2 0 0 2 2 2 0 UPF0242 C-terminal PAS-like domain Tocopherol_cycl PF14249.6 gi|21226621|ref|NP_632543.1| - 8.5e-23 81.0 0.1 3.8e-19 69.0 0.0 2.0 1 1 0 2 2 2 2 Tocopherol cyclase DUF4349 PF14257.6 gi|21226622|ref|NP_632544.1| - 0.33 10.4 1.9 11 5.3 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4349) DnaG_DnaB_bind PF08278.11 gi|21226622|ref|NP_632544.1| - 1 10.0 3.6 0.63 10.7 0.2 2.4 3 0 0 3 3 3 0 DNA primase DnaG DnaB-binding DUF4140 PF13600.6 gi|21226622|ref|NP_632544.1| - 1.6 9.2 3.5 8 7.0 0.1 3.3 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) DivIC PF04977.15 gi|21226622|ref|NP_632544.1| - 1.9 8.3 14.1 1 9.2 0.1 4.5 4 0 0 4 4 4 0 Septum formation initiator Syntaxin-6_N PF09177.11 gi|21226622|ref|NP_632544.1| - 5 7.7 11.4 22 5.7 0.8 4.2 3 1 0 3 3 3 0 Syntaxin 6, N-terminal Transposase_20 PF02371.16 gi|21226624|ref|NP_632546.1| - 1.4e-28 99.0 0.0 3.6e-28 97.7 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|21226624|ref|NP_632546.1| - 9.1e-20 71.1 0.2 2e-19 70.0 0.2 1.6 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.12 gi|21226624|ref|NP_632546.1| - 0.027 14.8 0.0 0.082 13.2 0.0 1.8 1 0 0 1 1 1 0 Orthopoxvirus F14 protein 5_3_exonuc PF01367.20 gi|21226624|ref|NP_632546.1| - 0.21 12.2 2.7 3.3 8.4 0.7 3.3 2 1 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold DUF389 PF04087.14 gi|21226626|ref|NP_632548.1| - 9.9e-34 116.4 16.0 9.9e-34 116.4 16.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF389) UPF0114 PF03350.16 gi|21226626|ref|NP_632548.1| - 0.035 14.3 1.3 0.035 14.3 1.3 2.3 2 1 0 2 2 2 0 Uncharacterized protein family, UPF0114 Peptidase_M48_N PF16491.5 gi|21226626|ref|NP_632548.1| - 1.2 9.0 5.8 0.13 12.2 0.9 1.9 2 0 0 2 2 2 0 CAAX prenyl protease N-terminal, five membrane helices DUF2892 PF11127.8 gi|21226627|ref|NP_632549.1| - 3.6e-06 26.9 0.0 5.5e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) DUF2892 PF11127.8 gi|21226628|ref|NP_632550.1| - 0.16 12.0 0.2 0.25 11.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) Transglut_core PF01841.19 gi|21226629|ref|NP_632551.1| - 1.2e-09 38.6 0.2 2.9e-09 37.4 0.2 1.7 1 1 0 1 1 1 1 Transglutaminase-like superfamily DUF553 PF04473.12 gi|21226629|ref|NP_632551.1| - 0.0095 15.5 0.3 0.021 14.3 0.3 1.6 1 1 0 1 1 1 1 Transglutaminase-like domain Peptidase_C71 PF12386.8 gi|21226629|ref|NP_632551.1| - 0.013 15.2 0.6 0.019 14.6 0.6 1.2 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei Peptidase_C93 PF06035.11 gi|21226629|ref|NP_632551.1| - 0.12 12.2 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP Abhydrolase_1 PF00561.20 gi|21226631|ref|NP_632553.1| - 1.6e-21 77.1 0.0 1.9e-16 60.5 0.0 2.0 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|21226631|ref|NP_632553.1| - 2.5e-16 61.0 0.0 2.9e-16 60.7 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|21226631|ref|NP_632553.1| - 6.2e-08 32.2 0.2 4.4e-07 29.4 0.2 2.1 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|21226631|ref|NP_632553.1| - 0.002 16.9 0.0 0.012 14.3 0.0 1.9 1 1 0 1 1 1 1 Ndr family Esterase PF00756.20 gi|21226631|ref|NP_632553.1| - 0.15 11.6 0.0 0.46 10.1 0.0 1.9 3 0 0 3 3 3 0 Putative esterase AA_permease PF00324.21 gi|21226632|ref|NP_632554.1| - 1.9e-41 142.2 39.1 3e-41 141.5 39.1 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|21226632|ref|NP_632554.1| - 5.5e-41 140.8 48.0 7.3e-41 140.4 48.0 1.1 1 0 0 1 1 1 1 Amino acid permease Usp PF00582.26 gi|21226632|ref|NP_632554.1| - 6.4e-20 72.1 0.0 1.1e-08 35.6 0.0 3.2 2 1 0 2 2 2 2 Universal stress protein family Spore_permease PF03845.13 gi|21226632|ref|NP_632554.1| - 4.2e-12 45.6 15.8 4.2e-12 45.6 15.8 2.0 2 0 0 2 2 2 1 Spore germination protein ABC_sub_bind PF04392.12 gi|21226632|ref|NP_632554.1| - 0.026 13.8 0.0 0.041 13.1 0.0 1.2 1 0 0 1 1 1 0 ABC transporter substrate binding protein Ribosomal_L22e PF01776.17 gi|21226632|ref|NP_632554.1| - 0.51 10.7 2.4 0.39 11.1 0.5 1.7 2 0 0 2 2 2 0 Ribosomal L22e protein family DUF573 PF04504.14 gi|21226633|ref|NP_632555.1| - 0.0086 16.7 1.4 0.014 16.0 0.1 1.8 1 1 1 2 2 2 1 Protein of unknown function, DUF573 FANCI_S3 PF14677.6 gi|21226633|ref|NP_632555.1| - 0.056 13.1 0.1 0.1 12.3 0.0 1.4 1 1 0 1 1 1 0 FANCI solenoid 3 DUF2408 PF10303.9 gi|21226633|ref|NP_632555.1| - 0.083 13.5 0.6 0.11 13.1 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Acyl_transf_3 PF01757.22 gi|21226636|ref|NP_632558.1| - 7e-29 101.0 45.3 3.7e-28 98.6 45.3 1.8 1 1 0 1 1 1 1 Acyltransferase family CxxCxxCC PF03692.15 gi|21226637|ref|NP_632559.1| - 0.095 13.4 0.1 0.12 13.1 0.1 1.3 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain NosD PF05048.13 gi|21226638|ref|NP_632560.1| - 2.5e-11 43.3 13.5 3.1e-11 43.0 13.5 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21226638|ref|NP_632560.1| - 1.7e-08 34.5 20.7 3.3e-08 33.5 20.6 1.6 1 1 0 1 1 1 1 Right handed beta helix region DUF1565 PF07602.11 gi|21226638|ref|NP_632560.1| - 0.00013 21.4 14.1 0.00068 19.0 14.1 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1565) Cupin_2 PF07883.11 gi|21226639|ref|NP_632561.1| - 7.3e-18 64.0 0.1 9.8e-18 63.6 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|21226639|ref|NP_632561.1| - 0.00024 21.0 0.0 0.00033 20.6 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain CENP-C_C PF11699.8 gi|21226639|ref|NP_632561.1| - 0.00085 19.5 0.0 0.0011 19.1 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like MannoseP_isomer PF01050.18 gi|21226639|ref|NP_632561.1| - 0.0013 18.7 0.0 0.0015 18.4 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_3 PF05899.12 gi|21226639|ref|NP_632561.1| - 0.036 13.7 0.0 0.054 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Cupin_1 PF00190.22 gi|21226639|ref|NP_632561.1| - 0.062 12.9 0.0 0.062 12.9 0.0 1.2 1 0 0 1 1 1 0 Cupin DUF3763 PF12592.8 gi|21226640|ref|NP_632562.1| - 0.026 14.6 0.1 0.041 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3763) Cep3 PF16846.5 gi|21226641|ref|NP_632563.1| - 0.63 8.5 4.6 0.66 8.4 4.6 1.0 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit B SHR3_chaperone PF08229.11 gi|21226641|ref|NP_632563.1| - 9.7 5.1 6.7 11 4.9 6.7 1.1 1 0 0 1 1 1 0 ER membrane protein SH3 Metallophos PF00149.28 gi|21226642|ref|NP_632564.1| - 6e-15 56.3 1.3 8.8e-15 55.7 1.3 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|21226642|ref|NP_632564.1| - 2e-09 37.9 0.1 1e-08 35.6 0.1 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF4227 PF14004.6 gi|21226642|ref|NP_632564.1| - 0.012 15.6 1.0 0.077 13.0 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) Metallophos_3 PF14582.6 gi|21226642|ref|NP_632564.1| - 0.048 13.0 0.0 0.092 12.0 0.0 1.4 1 0 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily KRTAP PF11759.8 gi|21226644|ref|NP_632566.1| - 2.7 8.6 130.3 1.8e+04 -79.9 130.3 5.2 1 1 0 1 1 1 0 Keratin-associated matrix RNB PF00773.19 gi|21226646|ref|NP_632568.1| - 5.5e-64 216.5 0.0 1e-63 215.7 0.0 1.4 1 0 0 1 1 1 1 RNB domain dsrm PF00035.26 gi|21226646|ref|NP_632568.1| - 1.3e-12 48.3 0.1 5.4e-09 36.6 0.1 2.4 2 0 0 2 2 2 2 Double-stranded RNA binding motif DND1_DSRM PF14709.7 gi|21226646|ref|NP_632568.1| - 0.00031 20.9 0.6 0.13 12.5 0.6 3.2 2 1 0 2 2 2 1 double strand RNA binding domain from DEAD END PROTEIN 1 EFF-AFF PF14884.6 gi|21226646|ref|NP_632568.1| - 0.2 9.8 0.0 0.3 9.1 0.0 1.1 1 0 0 1 1 1 0 Type I membrane glycoproteins cell-cell fusogen PI-TkoII_IV PF18714.1 gi|21226647|ref|NP_632569.1| - 0.057 12.9 0.0 0.071 12.6 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase II intein Domain IV DUF4358 PF14270.6 gi|21226648|ref|NP_632570.1| - 0.0021 18.3 0.8 0.0024 18.1 0.1 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4358) ParE_toxin PF05016.15 gi|21226648|ref|NP_632570.1| - 0.0024 18.4 0.0 0.0033 18.0 0.0 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE DUF4748 PF15932.5 gi|21226649|ref|NP_632571.1| - 0.017 14.9 0.0 0.017 14.9 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4748) NVEALA PF14055.6 gi|21226649|ref|NP_632571.1| - 0.23 11.5 0.1 0.23 11.5 0.1 3.1 3 1 1 4 4 4 0 NVEALA protein DUF5336 PF17270.2 gi|21226649|ref|NP_632571.1| - 2.9 7.5 13.7 0.11 12.1 6.7 2.0 1 1 0 2 2 2 0 Family of unknown function (DUF5336) Fic PF02661.18 gi|21226651|ref|NP_632573.1| - 5.7e-11 43.2 0.0 1e-10 42.3 0.0 1.5 1 0 0 1 1 1 1 Fic/DOC family Cyto_heme_lyase PF01265.17 gi|21226651|ref|NP_632573.1| - 0.068 12.7 0.1 0.097 12.3 0.1 1.3 1 0 0 1 1 1 0 Cytochrome c/c1 heme lyase VAPB_antitox PF02697.14 gi|21226652|ref|NP_632574.1| - 3.9e-06 27.5 1.5 5.1e-06 27.2 0.9 1.6 1 1 0 1 1 1 1 Putative antitoxin DbpA PF03880.15 gi|21226653|ref|NP_632575.1| - 0.076 13.0 0.2 4.3 7.4 0.1 2.2 1 1 1 2 2 2 0 DbpA RNA binding domain PH_15 PF17339.2 gi|21226653|ref|NP_632575.1| - 0.14 12.1 0.1 2.5 8.0 0.1 2.0 1 1 1 2 2 2 0 PH domain Fam20C PF06702.12 gi|21226655|ref|NP_632577.1| - 0.054 13.3 1.1 5.6 6.7 0.1 2.2 2 0 0 2 2 2 0 Golgi casein kinase, C-terminal, Fam20 Cas_Cas4 PF01930.17 gi|21226659|ref|NP_632581.1| - 1.7e-15 57.5 6.9 2.1e-15 57.2 6.9 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|21226659|ref|NP_632581.1| - 3.8e-08 33.6 2.0 5e-08 33.2 2.0 1.2 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily CRISPR_Cas2 PF09827.9 gi|21226660|ref|NP_632582.1| - 7.2e-22 77.4 0.5 8.6e-22 77.1 0.5 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 F-box_5 PF18511.1 gi|21226660|ref|NP_632582.1| - 0.1 12.2 2.4 8 6.1 0.2 2.3 2 0 0 2 2 2 0 F-box Cas_Cas2CT1978 PF09707.10 gi|21226660|ref|NP_632582.1| - 0.12 12.5 0.0 0.14 12.2 0.0 1.3 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_Cas2CT1978) Cas_Cas1 PF01867.16 gi|21226661|ref|NP_632583.1| - 1.8e-79 266.8 0.0 2.1e-79 266.6 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 YojJ PF10372.9 gi|21226661|ref|NP_632583.1| - 0.047 13.8 0.0 0.38 10.9 0.0 2.2 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Cas6b_C PF17262.2 gi|21226662|ref|NP_632584.1| - 1.7e-42 144.1 0.2 2.4e-42 143.7 0.2 1.2 1 0 0 1 1 1 1 Cas6b C-terminal domain Cas6b_N PF17955.1 gi|21226662|ref|NP_632584.1| - 8.3e-31 106.1 0.0 2e-30 104.9 0.0 1.7 2 0 0 2 2 2 1 Cas6b N-terminal domain DEAD PF00270.29 gi|21226663|ref|NP_632585.1| - 8.7e-09 35.4 0.0 3.7e-08 33.3 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|21226663|ref|NP_632585.1| - 3.1e-07 30.7 0.9 1.5e-06 28.5 0.1 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain HD_6 PF18019.1 gi|21226663|ref|NP_632585.1| - 1.3e-05 25.4 0.1 2.3e-05 24.6 0.1 1.3 1 0 0 1 1 1 1 HD domain ResIII PF04851.15 gi|21226663|ref|NP_632585.1| - 0.00025 21.1 3.1 0.00025 21.1 3.1 3.0 2 1 2 4 4 4 1 Type III restriction enzyme, res subunit HD PF01966.22 gi|21226663|ref|NP_632585.1| - 0.00033 20.9 0.9 0.00094 19.4 0.1 2.2 2 0 0 2 2 2 1 HD domain AAA_22 PF13401.6 gi|21226663|ref|NP_632585.1| - 0.0045 17.3 0.6 0.17 12.2 0.2 3.2 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|21226663|ref|NP_632585.1| - 0.006 16.3 0.0 0.12 12.1 0.1 2.4 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_16 PF13191.6 gi|21226663|ref|NP_632585.1| - 0.0065 16.9 0.0 0.018 15.4 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain PhoH PF02562.16 gi|21226663|ref|NP_632585.1| - 0.018 14.5 0.0 0.57 9.6 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein DUF4093 PF13331.6 gi|21226663|ref|NP_632585.1| - 0.02 15.3 1.0 0.25 11.8 0.2 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4093) AAA PF00004.29 gi|21226663|ref|NP_632585.1| - 0.15 12.5 1.3 1.1 9.6 0.1 2.9 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) EF-hand_4 PF12763.7 gi|21226663|ref|NP_632585.1| - 0.19 11.7 3.3 0.23 11.4 0.2 2.6 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Cas_Cas5d PF09704.10 gi|21226664|ref|NP_632586.1| - 5.4e-08 33.0 0.0 6.9e-08 32.6 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) Inos-1-P_synth PF01658.17 gi|21226664|ref|NP_632586.1| - 0.064 13.5 0.1 0.1 12.8 0.1 1.3 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase Cas_Cas7 PF05107.12 gi|21226665|ref|NP_632587.1| - 6.5e-50 170.0 0.2 7.6e-50 169.8 0.2 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Cas7 Cas_TM1802 PF09484.10 gi|21226666|ref|NP_632588.1| - 3e-35 122.1 28.0 3.6e-33 115.2 24.8 2.0 1 1 1 2 2 2 2 CRISPR-associated protein TM1802 (cas_TM1802) HTH_24 PF13412.6 gi|21226667|ref|NP_632589.1| - 7.1e-07 28.7 0.1 1.3e-06 27.9 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|21226667|ref|NP_632589.1| - 2.3e-06 27.4 0.1 5.1e-06 26.3 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Cas_APE2256 PF09651.10 gi|21226667|ref|NP_632589.1| - 3.3e-06 27.0 0.2 6.9e-06 26.0 0.0 1.6 2 0 0 2 2 2 1 CRISPR-associated protein (Cas_APE2256) HTH_45 PF14947.6 gi|21226667|ref|NP_632589.1| - 4.9e-06 26.4 0.1 1e-05 25.4 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1887 PF09002.11 gi|21226667|ref|NP_632589.1| - 6e-05 21.9 0.2 7.6e-05 21.6 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1887) TrmB PF01978.19 gi|21226667|ref|NP_632589.1| - 0.00051 19.9 0.1 0.0018 18.2 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Cas_Cas02710 PF09670.10 gi|21226667|ref|NP_632589.1| - 0.0046 15.8 0.1 0.0062 15.4 0.1 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) HTH_20 PF12840.7 gi|21226667|ref|NP_632589.1| - 0.0059 16.6 0.0 0.012 15.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|21226667|ref|NP_632589.1| - 0.012 15.4 0.0 0.022 14.6 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain Cas_NE0113 PF09623.10 gi|21226667|ref|NP_632589.1| - 0.031 14.0 0.0 0.037 13.7 0.0 1.4 1 0 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) MarR PF01047.22 gi|21226667|ref|NP_632589.1| - 0.04 13.8 0.3 0.1 12.5 0.1 1.8 2 0 0 2 2 2 0 MarR family ATP-synt_F PF01990.17 gi|21226667|ref|NP_632589.1| - 0.052 13.9 0.6 0.12 12.7 0.3 1.8 1 1 1 2 2 2 0 ATP synthase (F/14-kDa) subunit HTH_11 PF08279.12 gi|21226667|ref|NP_632589.1| - 0.075 13.0 0.1 0.19 11.7 0.1 1.7 1 0 0 1 1 1 0 HTH domain DNA_alkylation PF08713.11 gi|21226668|ref|NP_632590.1| - 1.6e-69 233.9 1.5 1.8e-69 233.7 1.5 1.0 1 0 0 1 1 1 1 DNA alkylation repair enzyme YvbH_ext PF11724.8 gi|21226668|ref|NP_632590.1| - 0.0012 19.1 0.4 0.0045 17.3 0.4 2.1 1 0 0 1 1 1 1 YvbH-like oligomerisation region HEAT_2 PF13646.6 gi|21226668|ref|NP_632590.1| - 0.018 15.4 0.0 0.93 9.9 0.0 2.3 1 1 0 2 2 2 0 HEAT repeats Acetyltransf_3 PF13302.7 gi|21226669|ref|NP_632591.1| - 1.5e-19 71.0 0.0 1.8e-19 70.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21226669|ref|NP_632591.1| - 4.7e-13 49.4 0.1 6.3e-13 49.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|21226669|ref|NP_632591.1| - 5.7e-09 36.3 0.5 6.3e-09 36.2 0.5 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|21226669|ref|NP_632591.1| - 9.1e-05 22.8 0.7 0.0017 18.7 0.3 2.3 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21226669|ref|NP_632591.1| - 0.0013 18.7 0.1 0.0077 16.2 0.1 2.0 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|21226669|ref|NP_632591.1| - 0.01 15.5 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain ABC_tran PF00005.27 gi|21226672|ref|NP_632594.1| - 1.9e-24 86.7 0.0 3.3e-24 85.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21226672|ref|NP_632594.1| - 7e-11 42.5 1.8 7.8e-05 22.6 0.4 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|21226672|ref|NP_632594.1| - 2.2e-05 24.8 0.1 0.00012 22.4 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|21226672|ref|NP_632594.1| - 0.00013 21.9 0.0 0.026 14.2 0.1 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|21226672|ref|NP_632594.1| - 0.00031 20.4 1.0 0.0011 18.7 0.3 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|21226672|ref|NP_632594.1| - 0.00059 19.3 0.6 0.0021 17.5 0.2 1.9 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|21226672|ref|NP_632594.1| - 0.00084 19.8 0.1 0.0018 18.7 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 gi|21226672|ref|NP_632594.1| - 0.0022 17.8 0.1 0.047 13.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 gi|21226672|ref|NP_632594.1| - 0.0037 16.8 0.0 0.0062 16.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF815 PF05673.13 gi|21226672|ref|NP_632594.1| - 0.0075 15.5 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_23 PF13476.6 gi|21226672|ref|NP_632594.1| - 0.0078 16.7 0.1 0.014 15.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|21226672|ref|NP_632594.1| - 0.008 16.1 0.2 3.2 7.6 0.0 2.3 2 0 0 2 2 2 2 NTPase MMR_HSR1 PF01926.23 gi|21226672|ref|NP_632594.1| - 0.013 15.5 0.0 0.031 14.4 0.0 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|21226672|ref|NP_632594.1| - 0.038 13.9 0.1 0.068 13.1 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase DUF87 PF01935.17 gi|21226672|ref|NP_632594.1| - 0.046 13.8 0.3 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 Helicase HerA, central domain Rad17 PF03215.15 gi|21226672|ref|NP_632594.1| - 0.066 13.1 0.0 0.56 10.1 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_14 PF13173.6 gi|21226672|ref|NP_632594.1| - 0.067 13.2 0.0 0.69 9.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|21226672|ref|NP_632594.1| - 0.085 12.2 0.1 0.19 11.1 0.1 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family Roc PF08477.13 gi|21226672|ref|NP_632594.1| - 0.11 12.8 0.0 0.26 11.5 0.0 1.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 gi|21226672|ref|NP_632594.1| - 0.15 11.4 0.0 0.32 10.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein AAA_30 PF13604.6 gi|21226672|ref|NP_632594.1| - 0.16 11.7 0.1 2.5 7.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain Metallophos PF00149.28 gi|21226673|ref|NP_632595.1| - 2.6e-18 67.3 1.4 3.3e-18 66.9 1.4 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|21226673|ref|NP_632595.1| - 2.7e-12 47.2 0.0 4.4e-12 46.5 0.0 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|21226673|ref|NP_632595.1| - 0.00082 18.8 0.0 0.0015 17.9 0.0 1.4 1 0 0 1 1 1 1 Metallophosphoesterase, calcineurin superfamily BtpA PF03437.15 gi|21226673|ref|NP_632595.1| - 0.1 12.0 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 BtpA family ROK PF00480.20 gi|21226673|ref|NP_632595.1| - 0.1 12.0 0.1 0.13 11.7 0.1 1.1 1 0 0 1 1 1 0 ROK family MutL PF13941.6 gi|21226673|ref|NP_632595.1| - 0.16 10.6 0.0 0.22 10.1 0.0 1.1 1 0 0 1 1 1 0 MutL protein DNA_pol_E_B PF04042.16 gi|21226673|ref|NP_632595.1| - 0.2 11.0 0.0 0.36 10.1 0.0 1.5 1 1 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B Alk_phosphatase PF00245.20 gi|21226674|ref|NP_632596.1| - 2.1e-88 297.1 0.1 3e-88 296.5 0.1 1.2 1 0 0 1 1 1 1 Alkaline phosphatase Metalloenzyme PF01676.18 gi|21226674|ref|NP_632596.1| - 3.2e-05 23.4 0.0 0.00016 21.1 0.0 1.9 2 0 0 2 2 2 1 Metalloenzyme superfamily Urocanase_N PF17391.2 gi|21226674|ref|NP_632596.1| - 0.13 12.0 0.0 0.28 10.9 0.0 1.6 1 0 0 1 1 1 0 Urocanase N-terminal domain PsiE PF06146.12 gi|21226675|ref|NP_632597.1| - 7.9e-10 39.0 4.5 7.9e-10 39.0 4.5 2.1 2 1 0 2 2 2 1 Phosphate-starvation-inducible E Phage_Coat_Gp8 PF05371.12 gi|21226675|ref|NP_632597.1| - 0.052 13.3 1.5 1.2 9.0 0.4 2.4 2 0 0 2 2 2 0 Phage major coat protein, Gp8 DUF3397 PF11877.8 gi|21226675|ref|NP_632597.1| - 0.38 11.0 8.9 0.25 11.6 1.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3397) LMWPc PF01451.21 gi|21226676|ref|NP_632598.1| - 7.5e-18 65.3 0.0 9.3e-18 65.0 0.0 1.1 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase PhoU PF01895.19 gi|21226677|ref|NP_632599.1| - 2e-20 73.1 13.9 1.2e-18 67.3 1.4 3.2 3 1 0 3 3 3 2 PhoU domain MazE_antitoxin PF04014.18 gi|21226677|ref|NP_632599.1| - 2.3e-09 37.0 0.0 5.1e-09 35.9 0.0 1.6 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PhoU PF01895.19 gi|21226678|ref|NP_632600.1| - 4.6e-35 120.0 9.5 4.4e-21 75.1 1.4 2.1 2 0 0 2 2 2 2 PhoU domain PH_16 PF17838.1 gi|21226678|ref|NP_632600.1| - 0.00045 20.1 0.6 0.14 12.0 0.1 2.3 2 0 0 2 2 2 2 PH domain ABC_tran PF00005.27 gi|21226679|ref|NP_632601.1| - 0.0007 20.1 0.0 0.00097 19.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|21226679|ref|NP_632601.1| - 0.0027 18.0 0.0 0.0035 17.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|21226679|ref|NP_632601.1| - 0.0049 16.8 0.0 0.0074 16.2 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain Viral_helicase1 PF01443.18 gi|21226679|ref|NP_632601.1| - 0.026 14.3 0.0 0.035 13.8 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase DUF4227 PF14004.6 gi|21226679|ref|NP_632601.1| - 0.034 14.1 2.2 0.081 12.9 2.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) AAA_16 PF13191.6 gi|21226679|ref|NP_632601.1| - 0.053 13.9 0.0 0.073 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain PBP_like_2 PF12849.7 gi|21226680|ref|NP_632602.1| - 5.6e-46 157.5 1.9 1e-45 156.6 1.9 1.4 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|21226680|ref|NP_632602.1| - 2.3e-22 79.1 0.1 3.2e-22 78.6 0.1 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|21226680|ref|NP_632602.1| - 6.5e-08 32.6 0.0 1.1e-07 31.8 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|21226680|ref|NP_632602.1| - 0.045 13.7 0.6 0.14 12.1 0.6 1.8 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein OrfB_Zn_ribbon PF07282.11 gi|21226681|ref|NP_632603.1| - 5.2e-26 90.4 0.5 1.1e-25 89.4 0.5 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HypA PF01155.19 gi|21226681|ref|NP_632603.1| - 0.0063 16.5 2.6 0.0099 15.9 0.7 2.1 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HAD_2 PF13419.6 gi|21226682|ref|NP_632604.1| - 1e-15 58.2 0.0 1.3e-15 57.9 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|21226682|ref|NP_632604.1| - 1.9e-06 28.3 0.0 6.7e-06 26.5 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|21226682|ref|NP_632604.1| - 5.1e-05 23.3 0.0 8.2e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like DUF3206 PF11472.8 gi|21226682|ref|NP_632604.1| - 0.055 13.5 0.0 0.086 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3206) PHP PF02811.19 gi|21226683|ref|NP_632605.1| - 1e-05 25.9 0.0 2e-05 24.9 0.0 1.5 1 1 0 1 1 1 1 PHP domain Glyco_tran_28_C PF04101.16 gi|21226684|ref|NP_632606.1| - 3e-15 56.6 0.0 4.7e-15 56.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 gi|21226684|ref|NP_632606.1| - 8.8e-14 51.5 0.0 8.8e-13 48.2 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferase family 1 Glyco_transf_4 PF13439.6 gi|21226684|ref|NP_632606.1| - 5.6e-07 29.7 0.0 1e-06 28.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_transf_28 PF03033.20 gi|21226684|ref|NP_632606.1| - 7e-05 22.9 0.0 0.00012 22.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Glyco_trans_1_4 PF13692.6 gi|21226684|ref|NP_632606.1| - 0.0001 22.7 0.0 0.00018 21.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 UDPGT PF00201.18 gi|21226684|ref|NP_632606.1| - 0.014 14.2 0.0 0.023 13.5 0.0 1.3 1 0 0 1 1 1 0 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_4_2 PF13477.6 gi|21226684|ref|NP_632606.1| - 0.03 14.3 0.0 0.057 13.4 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase 4-like DUF1638 PF07796.11 gi|21226685|ref|NP_632607.1| - 1.1e-34 119.8 0.0 1.4e-34 119.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF1638 PF07796.11 gi|21226686|ref|NP_632608.1| - 9.7e-40 136.3 0.1 1.9e-39 135.3 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1638) CRM1_repeat_2 PF18784.1 gi|21226686|ref|NP_632608.1| - 0.52 10.0 2.6 2.7 7.7 0.4 2.4 2 0 0 2 2 2 0 CRM1 / Exportin repeat 2 Glycogen_syn PF05693.13 gi|21226687|ref|NP_632609.1| - 1.6e-15 56.8 0.0 4.2e-09 35.5 0.0 3.3 3 1 0 3 3 3 2 Glycogen synthase Glyco_transf_4 PF13439.6 gi|21226687|ref|NP_632609.1| - 2.1e-07 31.1 0.0 3.6e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_transf_5 PF08323.11 gi|21226687|ref|NP_632609.1| - 0.0012 18.6 0.0 0.0065 16.2 0.0 2.0 2 0 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 gi|21226687|ref|NP_632609.1| - 0.022 14.3 0.0 0.052 13.1 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21226687|ref|NP_632609.1| - 0.028 14.8 0.0 0.065 13.7 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF4921 PF16268.5 gi|21226688|ref|NP_632610.1| - 2.2e-15 56.4 0.0 1.3e-06 27.5 0.0 3.1 3 0 0 3 3 3 3 Domain of unknown function (DUF4921) GalP_UDP_transf PF01087.22 gi|21226688|ref|NP_632610.1| - 1.1e-09 39.0 0.0 3e-08 34.3 0.0 2.6 1 1 1 2 2 2 1 Galactose-1-phosphate uridyl transferase, N-terminal domain DUF4931 PF16285.5 gi|21226688|ref|NP_632610.1| - 0.00026 20.4 0.6 0.0015 17.9 0.6 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4931) GalP_UDP_tr_C PF02744.17 gi|21226688|ref|NP_632610.1| - 0.061 13.0 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain HIT PF01230.23 gi|21226688|ref|NP_632610.1| - 0.21 12.3 0.0 3.7 8.3 0.0 2.2 2 0 0 2 2 2 0 HIT domain Glycos_transf_1 PF00534.20 gi|21226689|ref|NP_632611.1| - 3.3e-31 108.1 0.0 9.9e-31 106.6 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21226689|ref|NP_632611.1| - 4.6e-25 88.6 0.0 9.3e-25 87.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21226689|ref|NP_632611.1| - 4.8e-23 82.0 0.6 1.2e-22 80.7 0.4 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|21226689|ref|NP_632611.1| - 1.2e-19 71.4 0.0 1.9e-19 70.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|21226689|ref|NP_632611.1| - 4e-14 52.9 0.1 2.9e-06 27.2 0.0 2.2 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_trans_4_2 PF13477.6 gi|21226689|ref|NP_632611.1| - 2e-08 34.3 0.0 4.2e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|21226689|ref|NP_632611.1| - 0.0028 18.0 0.0 0.0076 16.6 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF2150 PF09920.9 gi|21226690|ref|NP_632612.1| - 2.4e-70 236.4 5.3 2.9e-70 236.1 5.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) UPF0179 PF03684.13 gi|21226691|ref|NP_632613.1| - 5.7e-53 178.6 4.5 6.4e-53 178.4 4.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) GCSF PF16647.5 gi|21226691|ref|NP_632613.1| - 0.15 11.9 0.2 0.22 11.4 0.2 1.2 1 0 0 1 1 1 0 Granulocyte colony-stimulating factor Fe-ADH_2 PF13685.6 gi|21226692|ref|NP_632614.1| - 6.8e-78 261.8 1.8 8.4e-78 261.5 1.8 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|21226692|ref|NP_632614.1| - 1.9e-26 92.7 5.5 4.3e-25 88.3 5.5 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|21226692|ref|NP_632614.1| - 7.8e-09 35.1 0.2 3.9e-08 32.8 0.2 1.9 1 1 0 1 1 1 1 3-dehydroquinate synthase AIRC PF00731.20 gi|21226692|ref|NP_632614.1| - 0.0025 17.4 0.3 0.0062 16.1 0.3 1.7 1 1 0 1 1 1 1 AIR carboxylase DUF63 PF01889.17 gi|21226693|ref|NP_632615.1| - 7.3e-102 341.2 12.5 8.1e-102 341.0 12.5 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 SpoIIM PF01944.17 gi|21226694|ref|NP_632616.1| - 1.6e-33 116.0 19.6 2e-33 115.7 19.6 1.1 1 0 0 1 1 1 1 Stage II sporulation protein M DUF1297 PF06973.12 gi|21226695|ref|NP_632617.1| - 6.4e-77 257.3 0.0 8.6e-77 256.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|21226695|ref|NP_632617.1| - 1.8e-44 150.6 0.0 2.8e-44 150.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) GTP_EFTU PF00009.27 gi|21226696|ref|NP_632618.1| - 3.2e-32 111.7 1.3 1.5e-31 109.5 1.3 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|21226696|ref|NP_632618.1| - 4.4e-31 107.0 0.8 1.1e-30 105.8 0.8 1.7 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 gi|21226696|ref|NP_632618.1| - 4.6e-08 33.3 0.4 1.6e-07 31.6 0.4 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RsgA_GTPase PF03193.16 gi|21226696|ref|NP_632618.1| - 9.6e-06 25.6 0.9 0.00015 21.7 0.2 2.3 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|21226696|ref|NP_632618.1| - 0.00037 20.5 0.0 0.0027 17.8 0.0 2.3 2 1 0 2 2 2 1 50S ribosome-binding GTPase Nop10p PF04135.12 gi|21226696|ref|NP_632618.1| - 0.0027 17.7 2.9 0.0057 16.7 2.9 1.4 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family MMR_HSR1_Xtn PF16897.5 gi|21226696|ref|NP_632618.1| - 0.0034 17.4 0.1 0.0082 16.1 0.1 1.7 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain PduV-EutP PF10662.9 gi|21226696|ref|NP_632618.1| - 0.004 16.9 2.9 1.8 8.3 0.7 2.8 3 0 0 3 3 3 2 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 gi|21226696|ref|NP_632618.1| - 0.0068 16.0 1.8 0.99 8.9 0.7 2.9 2 1 0 2 2 2 1 Ferrous iron transport protein B PolC_DP2 PF03833.13 gi|21226696|ref|NP_632618.1| - 0.031 12.1 0.2 0.043 11.7 0.2 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 TF_Zn_Ribbon PF08271.12 gi|21226696|ref|NP_632618.1| - 3.4 7.3 8.7 9.1 5.9 8.7 1.7 1 1 0 1 1 1 0 TFIIB zinc-binding PIN_9 PF18477.1 gi|21226697|ref|NP_632619.1| - 3.7e-43 146.5 0.0 4.1e-43 146.4 0.0 1.0 1 0 0 1 1 1 1 PIN like domain PIN_5 PF08745.11 gi|21226697|ref|NP_632619.1| - 3.6e-06 26.5 0.1 0.0037 16.7 0.0 2.1 2 0 0 2 2 2 2 PINc domain ribonuclease PIN PF01850.21 gi|21226697|ref|NP_632619.1| - 0.00062 20.3 0.1 0.54 10.8 0.0 2.1 1 1 1 2 2 2 2 PIN domain PIN_4 PF13638.6 gi|21226697|ref|NP_632619.1| - 0.014 15.6 0.1 0.18 12.1 0.0 2.0 1 1 1 2 2 2 0 PIN domain DUF5615 PF18480.1 gi|21226697|ref|NP_632619.1| - 0.067 13.0 0.0 0.28 11.0 0.0 2.1 2 2 0 2 2 2 0 Domain of unknown function (DUF5615) DUF188 PF02639.14 gi|21226697|ref|NP_632619.1| - 0.086 12.5 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 PIN_10 PF18478.1 gi|21226697|ref|NP_632619.1| - 0.14 12.4 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 PIN like domain MA3 PF02847.17 gi|21226697|ref|NP_632619.1| - 0.15 12.1 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 MA3 domain SHS2_Rpb7-N PF03876.17 gi|21226698|ref|NP_632620.1| - 1.6e-19 70.1 0.2 4e-19 68.8 0.1 1.7 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|21226698|ref|NP_632620.1| - 1.8e-10 41.0 0.2 2.9e-10 40.3 0.2 1.4 1 0 0 1 1 1 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.12 gi|21226698|ref|NP_632620.1| - 0.027 14.7 0.0 0.057 13.6 0.0 1.5 2 0 0 2 2 2 0 RNA polymerase III subunit Rpc25 RNase_II_C_S1 PF18614.1 gi|21226698|ref|NP_632620.1| - 0.09 12.7 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain Spt4 PF06093.13 gi|21226699|ref|NP_632621.1| - 2.7e-13 49.8 0.0 3.2e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger Prok-RING_4 PF14447.6 gi|21226699|ref|NP_632621.1| - 0.0019 18.0 0.8 0.0025 17.6 0.8 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 TF_Zn_Ribbon PF08271.12 gi|21226699|ref|NP_632621.1| - 0.031 13.8 0.5 0.089 12.3 0.0 1.9 2 0 0 2 2 2 0 TFIIB zinc-binding DZR PF12773.7 gi|21226699|ref|NP_632621.1| - 0.039 14.0 0.6 0.052 13.6 0.6 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-C3HC4_3 PF13920.6 gi|21226699|ref|NP_632621.1| - 0.049 13.5 2.0 0.073 13.0 2.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.6 gi|21226699|ref|NP_632621.1| - 0.088 12.2 2.5 0.42 10.1 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-RING_5 PF14634.6 gi|21226699|ref|NP_632621.1| - 0.092 12.7 2.1 0.12 12.4 2.1 1.2 1 0 0 1 1 1 0 zinc-RING finger domain NHL PF01436.21 gi|21226699|ref|NP_632621.1| - 0.11 12.6 0.0 1.3 9.2 0.0 2.2 2 0 0 2 2 2 0 NHL repeat DUF35_N PF12172.8 gi|21226699|ref|NP_632621.1| - 0.12 12.3 5.1 0.49 10.3 0.2 2.2 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) YhfH PF14149.6 gi|21226699|ref|NP_632621.1| - 1.3 9.0 5.0 8.7 6.4 0.6 2.3 1 1 1 2 2 2 0 YhfH-like protein Prim_Zn_Ribbon PF08273.12 gi|21226699|ref|NP_632621.1| - 1.7 9.0 6.6 1.2 9.5 0.8 2.2 1 1 1 2 2 2 0 Zinc-binding domain of primase-helicase DUF2256 PF10013.9 gi|21226699|ref|NP_632621.1| - 4.3 7.5 6.4 3.8 7.7 0.4 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF359 PF04019.12 gi|21226700|ref|NP_632622.1| - 1.1e-43 147.9 0.0 1.4e-43 147.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Ribosomal_S24e PF01282.19 gi|21226701|ref|NP_632623.1| - 1.1e-25 89.4 0.1 1.3e-25 89.1 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e Ribosomal_S4 PF00163.19 gi|21226701|ref|NP_632623.1| - 0.091 13.7 0.3 0.17 12.9 0.3 1.4 1 0 0 1 1 1 0 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S27 PF01599.19 gi|21226702|ref|NP_632624.1| - 1.6e-21 76.2 2.7 1.8e-21 76.0 2.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S27a Nudix_N_2 PF14803.6 gi|21226702|ref|NP_632624.1| - 0.00016 21.5 4.4 0.0019 18.1 4.5 2.3 2 1 0 2 2 2 1 Nudix N-terminal Ribosomal_L37e PF01907.19 gi|21226702|ref|NP_632624.1| - 0.0016 18.6 1.0 0.0018 18.4 1.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e GFA PF04828.14 gi|21226702|ref|NP_632624.1| - 0.019 15.3 0.9 0.13 12.6 0.0 1.9 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme RNA_POL_M_15KD PF02150.16 gi|21226702|ref|NP_632624.1| - 0.023 14.6 6.2 0.3 11.0 6.2 2.0 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit zf-ribbon_3 PF13248.6 gi|21226702|ref|NP_632624.1| - 0.024 14.0 2.0 0.76 9.3 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DUF1451 PF07295.11 gi|21226702|ref|NP_632624.1| - 0.039 14.0 0.4 0.041 13.9 0.4 1.0 1 0 0 1 1 1 0 Zinc-ribbon containing domain TF_Zn_Ribbon PF08271.12 gi|21226702|ref|NP_632624.1| - 0.064 12.8 1.3 0.1 12.2 1.3 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding MqsA_antitoxin PF15731.5 gi|21226702|ref|NP_632624.1| - 0.068 13.3 0.1 0.077 13.1 0.1 1.2 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA DZR PF12773.7 gi|21226702|ref|NP_632624.1| - 0.069 13.2 2.4 0.14 12.2 2.4 1.5 1 1 0 1 1 1 0 Double zinc ribbon NOB1_Zn_bind PF08772.11 gi|21226702|ref|NP_632624.1| - 0.17 12.1 5.5 0.4 10.9 0.5 2.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 gi|21226702|ref|NP_632624.1| - 0.27 11.0 7.5 1.4 8.7 1.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|21226702|ref|NP_632624.1| - 0.32 10.7 9.2 3.7 7.3 9.2 2.1 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain TPR_1 PF00515.28 gi|21226703|ref|NP_632625.1| - 5e-93 301.5 63.3 7.6e-08 31.9 0.2 21.1 22 0 0 22 22 22 15 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21226703|ref|NP_632625.1| - 6.1e-91 291.4 71.6 1e-07 31.5 0.2 21.9 21 1 0 21 21 21 16 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21226703|ref|NP_632625.1| - 1.3e-59 198.6 38.6 9.8e-10 38.9 0.2 14.4 9 3 5 16 16 16 12 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226703|ref|NP_632625.1| - 3.3e-55 183.5 51.8 7.9e-09 35.1 0.1 18.8 11 4 9 20 20 19 11 TPR repeat TPR_8 PF13181.6 gi|21226703|ref|NP_632625.1| - 1.1e-51 168.7 62.4 7.1e-05 22.7 0.1 21.0 21 1 1 22 22 21 11 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21226703|ref|NP_632625.1| - 1.5e-50 169.4 45.2 2.7e-09 37.2 0.8 14.2 7 2 8 15 15 15 12 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21226703|ref|NP_632625.1| - 4.5e-50 168.0 33.6 2.9e-09 37.3 0.1 12.8 10 3 0 12 12 11 8 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21226703|ref|NP_632625.1| - 2.3e-49 161.8 47.4 4.5e-05 23.9 0.0 19.4 7 5 12 20 20 19 10 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21226703|ref|NP_632625.1| - 8.1e-44 144.9 29.1 0.0012 19.1 0.1 19.6 19 1 1 20 20 20 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21226703|ref|NP_632625.1| - 2.7e-36 123.5 17.5 3.3e-06 27.1 0.0 11.8 8 2 1 12 12 12 8 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21226703|ref|NP_632625.1| - 4.9e-32 107.6 36.7 0.0021 17.9 0.1 18.0 20 0 0 20 20 19 8 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21226703|ref|NP_632625.1| - 5.8e-30 103.4 35.1 3.7e-06 27.1 0.0 11.2 5 3 8 13 13 13 11 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|21226703|ref|NP_632625.1| - 2e-22 78.3 47.1 0.057 14.1 0.0 16.6 20 0 0 20 20 13 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21226703|ref|NP_632625.1| - 2e-18 65.6 39.1 0.054 13.4 0.0 15.6 17 0 0 17 17 16 5 Tetratricopeptide repeat NARP1 PF12569.8 gi|21226703|ref|NP_632625.1| - 4.2e-16 59.0 5.8 0.16 10.8 0.5 8.4 5 3 3 9 9 9 4 NMDA receptor-regulated protein 1 TPR_15 PF13429.6 gi|21226703|ref|NP_632625.1| - 4.3e-15 55.7 9.7 0.0033 16.7 0.0 6.9 2 2 4 6 6 6 4 Tetratricopeptide repeat BTAD PF03704.17 gi|21226703|ref|NP_632625.1| - 4.6e-10 40.1 21.0 0.03 14.8 0.2 9.0 5 3 4 10 10 10 3 Bacterial transcriptional activator domain TPR_20 PF14561.6 gi|21226703|ref|NP_632625.1| - 4.3e-09 36.6 10.4 0.14 12.5 0.0 7.9 5 3 3 9 9 7 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|21226703|ref|NP_632625.1| - 2.3e-08 34.0 37.7 0.2 11.8 0.0 13.4 13 2 3 16 16 15 1 Fis1 C-terminal tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|21226703|ref|NP_632625.1| - 8.2e-08 32.3 19.2 0.74 9.8 0.4 9.1 4 2 5 9 9 9 2 Putative TPR-like repeat PPTA PF01239.22 gi|21226703|ref|NP_632625.1| - 2.9e-07 30.0 3.4 0.097 12.4 0.0 6.1 6 0 0 6 6 5 1 Protein prenyltransferase alpha subunit repeat DUF3856 PF12968.7 gi|21226703|ref|NP_632625.1| - 3.4e-07 30.4 22.6 1.5 8.9 0.2 11.2 5 1 2 10 10 10 2 Domain of Unknown Function (DUF3856) TPR_MalT PF17874.1 gi|21226703|ref|NP_632625.1| - 6e-07 29.1 4.7 0.0032 16.9 0.1 5.1 3 2 0 4 4 4 1 MalT-like TPR region RPN7 PF10602.9 gi|21226703|ref|NP_632625.1| - 6.7e-07 29.2 22.0 1.1 8.9 0.2 10.4 5 3 5 10 10 10 1 26S proteasome subunit RPN7 TPR_21 PF09976.9 gi|21226703|ref|NP_632625.1| - 0.00012 21.9 22.7 0.12 12.1 0.3 7.6 7 4 1 8 8 6 3 Tetratricopeptide repeat-like domain Alkyl_sulf_dimr PF14863.6 gi|21226703|ref|NP_632625.1| - 0.00066 20.1 0.3 47 4.4 0.0 6.3 6 1 1 7 7 7 0 Alkyl sulfatase dimerisation Rapsyn_N PF10579.9 gi|21226703|ref|NP_632625.1| - 0.00098 19.2 0.3 1.9 8.6 0.0 5.3 6 0 0 6 6 4 1 Rapsyn N-terminal myristoylation and linker region DUF627 PF04781.12 gi|21226703|ref|NP_632625.1| - 0.0026 17.8 5.7 59 3.7 0.0 7.5 7 3 2 9 9 8 0 Protein of unknown function (DUF627) HrpB1_HrpK PF09613.10 gi|21226703|ref|NP_632625.1| - 0.013 15.1 0.1 15 5.3 0.0 4.2 4 0 0 4 4 4 0 Bacterial type III secretion protein (HrpB1_HrpK) PknG_TPR PF16918.5 gi|21226703|ref|NP_632625.1| - 0.045 12.5 0.6 53 2.4 0.0 4.5 5 1 0 5 5 4 0 Protein kinase G tetratricopeptide repeat PPR PF01535.20 gi|21226703|ref|NP_632625.1| - 0.054 13.8 30.6 1.9 8.9 0.1 12.0 14 0 0 14 14 11 0 PPR repeat TPR_3 PF07720.12 gi|21226703|ref|NP_632625.1| - 0.057 13.4 29.6 6.6 6.8 0.0 9.9 11 0 0 11 11 9 0 Tetratricopeptide repeat TPR_4 PF07721.14 gi|21226703|ref|NP_632625.1| - 0.091 13.4 21.2 44 5.1 0.0 9.6 12 0 0 12 12 7 0 Tetratricopeptide repeat FAT PF02259.23 gi|21226703|ref|NP_632625.1| - 0.13 11.4 0.1 8.1 5.5 0.0 3.4 2 1 0 2 2 2 0 FAT domain Phage-MuB_C PF09077.11 gi|21226703|ref|NP_632625.1| - 0.14 12.1 2.6 44 4.1 0.0 4.6 4 1 2 6 6 4 0 Mu B transposition protein, C terminal Paf67 PF10255.9 gi|21226703|ref|NP_632625.1| - 0.2 10.6 0.1 8.2 5.3 0.0 3.5 3 1 0 3 3 3 0 RNA polymerase I-associated factor PAF67 Coatomer_E PF04733.14 gi|21226703|ref|NP_632625.1| - 0.42 10.0 2.4 86 2.4 0.0 4.5 4 2 1 6 6 6 0 Coatomer epsilon subunit NRBF2_MIT PF17169.4 gi|21226703|ref|NP_632625.1| - 0.86 9.9 14.0 58 4.0 0.0 6.8 7 1 1 8 8 6 0 MIT domain of nuclear receptor-binding factor 2 MIT PF04212.18 gi|21226703|ref|NP_632625.1| - 0.91 9.6 39.4 1.8 8.7 0.0 11.3 13 1 0 13 13 10 0 MIT (microtubule interacting and transport) domain Peptidase_M22 PF00814.25 gi|21226704|ref|NP_632626.1| - 2.7e-89 299.5 0.1 3.4e-89 299.1 0.1 1.1 1 0 0 1 1 1 1 Glycoprotease family RIO1 PF01163.22 gi|21226704|ref|NP_632626.1| - 2.6e-08 33.7 0.0 4.8e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|21226704|ref|NP_632626.1| - 1.4e-07 31.7 0.3 0.0011 19.0 0.0 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 gi|21226704|ref|NP_632626.1| - 1.9e-06 27.4 0.0 0.0001 21.7 0.0 2.3 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 gi|21226704|ref|NP_632626.1| - 4.7e-05 22.9 0.0 9.1e-05 21.9 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Carbam_trans_N PF02543.15 gi|21226704|ref|NP_632626.1| - 0.0013 18.5 0.0 0.023 14.4 0.0 2.2 2 0 0 2 2 2 1 Carbamoyltransferase N-terminus Pkinase_Tyr PF07714.17 gi|21226704|ref|NP_632626.1| - 0.047 13.0 0.0 0.078 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase Thioredoxin_6 PF13848.6 gi|21226704|ref|NP_632626.1| - 0.084 12.8 0.0 0.5 10.3 0.0 2.1 2 0 0 2 2 2 0 Thioredoxin-like domain B12-binding PF02310.19 gi|21226704|ref|NP_632626.1| - 0.091 12.8 0.1 3.9 7.5 0.0 3.0 3 0 0 3 3 3 0 B12 binding domain Ham1p_like PF01725.16 gi|21226705|ref|NP_632627.1| - 3.2e-54 183.7 0.0 3.5e-54 183.6 0.0 1.0 1 0 0 1 1 1 1 Ham1 family DUF4224 PF13986.6 gi|21226705|ref|NP_632627.1| - 0.11 12.3 0.0 0.65 9.9 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) TatC PF00902.18 gi|21226707|ref|NP_632629.1| - 0.007 16.2 0.1 0.0095 15.8 0.1 1.2 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) Cyclase PF04199.13 gi|21226708|ref|NP_632630.1| - 8.5e-23 81.1 0.0 1.1e-22 80.7 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase Fer4 PF00037.27 gi|21226709|ref|NP_632631.1| - 7.2e-11 41.4 15.5 8.6e-06 25.4 5.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21226709|ref|NP_632631.1| - 1.2e-07 31.7 12.0 1.8e-07 31.2 12.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21226709|ref|NP_632631.1| - 2.2e-07 30.6 14.1 0.00074 19.5 1.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21226709|ref|NP_632631.1| - 3e-07 31.3 11.6 6e-06 27.1 3.8 2.0 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|21226709|ref|NP_632631.1| - 1.9e-06 27.7 15.7 0.00054 19.9 2.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21226709|ref|NP_632631.1| - 6.7e-06 26.2 12.8 1.3e-05 25.3 12.8 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21226709|ref|NP_632631.1| - 8.2e-06 26.3 12.4 2e-05 25.1 12.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21226709|ref|NP_632631.1| - 0.00013 22.2 17.2 0.025 15.1 5.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21226709|ref|NP_632631.1| - 0.00031 20.8 12.7 0.05 13.7 1.7 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21226709|ref|NP_632631.1| - 0.00057 20.3 14.7 0.014 15.9 2.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226709|ref|NP_632631.1| - 0.0024 18.4 14.1 0.0029 18.1 1.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21226709|ref|NP_632631.1| - 0.0061 17.4 16.0 0.015 16.2 5.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21226709|ref|NP_632631.1| - 0.03 14.5 8.3 0.044 14.0 8.3 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21226709|ref|NP_632631.1| - 0.22 12.1 11.3 0.34 11.5 0.7 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|21226709|ref|NP_632631.1| - 2 9.2 12.2 0.55 11.0 1.8 2.5 2 1 0 2 2 2 0 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|21226710|ref|NP_632632.1| - 1.3e-08 35.4 0.1 8e-08 32.8 0.0 2.2 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|21226710|ref|NP_632632.1| - 7.3e-05 22.9 0.0 0.00015 21.9 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|21226710|ref|NP_632632.1| - 0.0026 18.0 0.1 0.0059 16.9 0.1 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain YdjM PF04307.14 gi|21226711|ref|NP_632633.1| - 5.9e-10 38.7 9.1 8.4e-10 38.2 9.1 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Form-deh_trans PF09163.11 gi|21226711|ref|NP_632633.1| - 2.9 7.7 5.3 0.45 10.3 0.2 2.3 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Man-6-P_recep PF02157.15 gi|21226711|ref|NP_632633.1| - 6.4 5.8 6.7 8.3 5.4 0.3 2.3 2 1 0 2 2 2 0 Mannose-6-phosphate receptor Hexapep PF00132.24 gi|21226712|ref|NP_632634.1| - 5.8e-08 32.2 12.8 2.7e-05 23.7 7.5 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21226712|ref|NP_632634.1| - 0.00015 21.4 17.5 0.02 14.6 10.4 3.8 3 1 1 4 4 4 4 Hexapeptide repeat of succinyl-transferase DUF362 PF04015.12 gi|21226713|ref|NP_632635.1| - 1.6e-52 178.7 0.0 2e-52 178.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|21226713|ref|NP_632635.1| - 9e-09 34.8 14.4 4.3e-05 23.2 6.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21226713|ref|NP_632635.1| - 7.6e-06 25.7 14.8 0.011 15.8 5.1 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21226713|ref|NP_632635.1| - 0.00015 22.3 15.3 0.00035 21.1 15.3 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21226713|ref|NP_632635.1| - 0.00017 21.7 16.2 0.00031 20.9 16.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21226713|ref|NP_632635.1| - 0.00023 21.1 14.8 0.00056 19.9 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21226713|ref|NP_632635.1| - 0.00035 20.6 14.8 0.00072 19.6 14.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21226713|ref|NP_632635.1| - 0.00063 19.8 14.8 0.0012 18.9 14.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Lar_N PF09861.9 gi|21226713|ref|NP_632635.1| - 0.074 12.2 0.0 0.16 11.2 0.0 1.5 1 0 0 1 1 1 0 Lactate racemase N-terminal domain Fer4_16 PF13484.6 gi|21226713|ref|NP_632635.1| - 0.17 12.8 15.3 0.77 10.7 2.4 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|21226713|ref|NP_632635.1| - 1.1 9.9 16.4 2.7 8.7 6.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21226713|ref|NP_632635.1| - 3.6 7.8 12.1 0.45 10.7 2.2 2.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226713|ref|NP_632635.1| - 4.2 8.0 18.4 11 6.6 7.9 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|21226713|ref|NP_632635.1| - 5.6 7.2 10.9 16 5.7 10.9 1.7 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_8 PF13183.6 gi|21226713|ref|NP_632635.1| - 8 7.0 18.1 8.7 6.9 6.4 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain NAD_synthase PF02540.17 gi|21226714|ref|NP_632636.1| - 1.2e-55 188.2 0.1 2.7e-33 115.1 0.0 2.1 2 0 0 2 2 2 2 NAD synthase QueC PF06508.13 gi|21226714|ref|NP_632636.1| - 0.0031 17.1 0.0 0.12 11.8 0.0 2.2 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|21226714|ref|NP_632636.1| - 0.0063 15.3 0.0 0.017 13.9 0.0 1.6 2 0 0 2 2 2 1 tRNA methyl transferase tRNA_Me_trans PF03054.16 gi|21226715|ref|NP_632637.1| - 0.00064 18.6 0.1 0.0015 17.4 0.1 1.6 1 1 1 2 2 2 1 tRNA methyl transferase QueC PF06508.13 gi|21226715|ref|NP_632637.1| - 0.016 14.7 0.0 0.035 13.6 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|21226715|ref|NP_632637.1| - 0.032 13.9 0.0 0.047 13.4 0.0 1.1 1 0 0 1 1 1 0 Asparagine synthase Diphthami_syn_2 PF01902.17 gi|21226715|ref|NP_632637.1| - 0.064 12.7 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 Diphthamide synthase NAD_synthase PF02540.17 gi|21226715|ref|NP_632637.1| - 0.086 11.9 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 NAD synthase AMP-binding PF00501.28 gi|21226716|ref|NP_632638.1| - 1.5e-74 251.1 0.0 1.8e-74 250.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|21226716|ref|NP_632638.1| - 4.9e-10 40.2 0.0 9.5e-10 39.3 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain PP-binding PF00550.25 gi|21226717|ref|NP_632639.1| - 2.4e-06 27.8 0.2 2.8e-06 27.6 0.2 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site ACPS PF01648.20 gi|21226718|ref|NP_632640.1| - 0.0026 17.9 0.2 0.016 15.3 0.1 2.3 2 1 0 2 2 2 1 4'-phosphopantetheinyl transferase superfamily DUF2551 PF10826.8 gi|21226719|ref|NP_632641.1| - 5.5e-31 106.6 0.5 6.2e-31 106.5 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) FUR PF01475.19 gi|21226719|ref|NP_632641.1| - 0.049 13.8 0.0 0.06 13.5 0.0 1.0 1 0 0 1 1 1 0 Ferric uptake regulator family Prenyltransf PF01255.19 gi|21226720|ref|NP_632642.1| - 6.8e-72 241.6 0.0 8.5e-72 241.3 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase DUF881 PF05949.12 gi|21226720|ref|NP_632642.1| - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF881) Thioredox_DsbH PF03190.15 gi|21226721|ref|NP_632643.1| - 2.2e-76 255.4 0.1 3.8e-76 254.6 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|21226721|ref|NP_632643.1| - 1.8e-10 40.8 0.0 3.5e-10 39.9 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like C5-epim_C PF06662.13 gi|21226721|ref|NP_632643.1| - 1.8e-05 24.4 0.6 0.012 15.1 0.0 2.7 2 0 0 2 2 2 2 D-glucuronyl C5-epimerase C-terminus GlcNAc_2-epim PF07221.11 gi|21226721|ref|NP_632643.1| - 0.00016 21.0 0.0 0.026 13.8 0.0 2.7 3 0 0 3 3 3 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) LANC_like PF05147.13 gi|21226721|ref|NP_632643.1| - 0.0069 15.0 0.0 0.24 9.9 0.0 2.6 2 0 0 2 2 2 1 Lanthionine synthetase C-like protein Glyco_hydro_76 PF03663.14 gi|21226721|ref|NP_632643.1| - 0.0097 15.5 0.1 2.5 7.5 0.0 2.8 2 1 0 2 2 2 1 Glycosyl hydrolase family 76 Pec_lyase PF09492.10 gi|21226721|ref|NP_632643.1| - 0.02 14.2 0.4 0.25 10.7 0.0 2.3 2 0 0 2 2 2 0 Pectic acid lyase Glyco_hydro_88 PF07470.13 gi|21226721|ref|NP_632643.1| - 0.022 13.8 0.8 3.4 6.6 0.1 2.8 3 0 0 3 3 3 0 Glycosyl Hydrolase Family 88 Thioredoxin_2 PF13098.6 gi|21226721|ref|NP_632643.1| - 0.048 14.1 0.0 0.17 12.3 0.0 2.0 2 0 0 2 2 2 0 Thioredoxin-like domain cwf21 PF08312.12 gi|21226721|ref|NP_632643.1| - 0.099 12.8 0.1 0.099 12.8 0.1 2.1 2 0 0 2 2 2 0 cwf21 domain Cyt-b5 PF00173.28 gi|21226722|ref|NP_632644.1| - 1e-11 44.8 0.3 1.3e-11 44.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Putative_PNPOx PF01243.20 gi|21226723|ref|NP_632645.1| - 2.4e-14 53.3 0.0 1.2e-13 51.0 0.0 1.8 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Pyrid_oxidase_2 PF13883.6 gi|21226723|ref|NP_632645.1| - 8.1e-08 32.4 0.0 9.6e-08 32.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|21226723|ref|NP_632645.1| - 0.00095 19.2 0.0 0.0012 18.8 0.0 1.3 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HTH_32 PF13565.6 gi|21226724|ref|NP_632646.1| - 2.8e-12 47.1 0.0 5.1e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_33 PF13592.6 gi|21226724|ref|NP_632646.1| - 1.1e-09 37.7 0.0 2.7e-09 36.5 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 gi|21226724|ref|NP_632646.1| - 3e-07 30.4 0.7 6.7e-07 29.3 0.7 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|21226724|ref|NP_632646.1| - 1e-06 28.3 0.1 1.9e-06 27.5 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 gi|21226724|ref|NP_632646.1| - 6.1e-06 26.2 0.0 1.1e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix LZ_Tnp_IS481 PF13011.6 gi|21226724|ref|NP_632646.1| - 0.00021 21.8 0.0 0.00032 21.2 0.0 1.3 1 0 0 1 1 1 1 leucine-zipper of insertion element IS481 DDE_3 PF13358.6 gi|21226725|ref|NP_632647.1| - 1.2e-20 73.8 0.1 1.5e-20 73.5 0.1 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_1 PF03184.19 gi|21226725|ref|NP_632647.1| - 2.1e-05 24.3 0.7 6.9e-05 22.6 0.6 1.7 1 1 0 1 1 1 1 DDE superfamily endonuclease SIP1 PF04938.12 gi|21226725|ref|NP_632647.1| - 0.011 15.5 0.0 0.014 15.1 0.0 1.0 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) DUF1462 PF07315.11 gi|21226725|ref|NP_632647.1| - 0.036 14.4 0.1 0.077 13.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1462) rve PF00665.26 gi|21226725|ref|NP_632647.1| - 0.076 13.2 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Integrase core domain DUF2500 PF10694.9 gi|21226726|ref|NP_632648.1| - 0.069 13.7 0.1 0.18 12.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) AAA_18 PF13238.6 gi|21226727|ref|NP_632649.1| - 9.8e-26 90.8 1.5 1.5e-25 90.2 1.5 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|21226727|ref|NP_632649.1| - 8.7e-07 29.4 0.6 1.3e-06 28.8 0.6 1.3 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 gi|21226727|ref|NP_632649.1| - 3e-05 24.0 1.4 0.075 12.9 0.2 2.2 1 1 0 2 2 2 2 Deoxynucleoside kinase AAA_28 PF13521.6 gi|21226727|ref|NP_632649.1| - 3.4e-05 24.1 0.2 6.9e-05 23.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|21226727|ref|NP_632649.1| - 0.00021 21.5 0.0 0.0019 18.3 0.0 2.1 1 1 0 1 1 1 1 AAA domain CoaE PF01121.20 gi|21226727|ref|NP_632649.1| - 0.0004 20.1 0.0 0.04 13.6 0.0 2.2 2 0 0 2 2 2 1 Dephospho-CoA kinase AAA_5 PF07728.14 gi|21226727|ref|NP_632649.1| - 0.0049 16.9 0.2 0.02 14.9 0.1 1.9 1 1 0 2 2 2 1 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 gi|21226727|ref|NP_632649.1| - 0.011 15.0 0.0 0.022 14.1 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin UPF0180 PF03698.13 gi|21226727|ref|NP_632649.1| - 0.011 15.8 0.6 0.78 10.0 0.1 3.2 2 2 0 2 2 2 0 Uncharacterised protein family (UPF0180) AAA PF00004.29 gi|21226727|ref|NP_632649.1| - 0.021 15.2 0.1 0.045 14.2 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 gi|21226727|ref|NP_632649.1| - 0.026 14.2 0.1 0.1 12.3 0.1 2.1 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_22 PF13401.6 gi|21226727|ref|NP_632649.1| - 0.08 13.2 0.5 0.18 12.1 0.5 1.9 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|21226727|ref|NP_632649.1| - 0.09 13.1 0.2 0.13 12.6 0.2 1.5 1 1 0 1 1 1 0 AAA ATPase domain KTI12 PF08433.10 gi|21226727|ref|NP_632649.1| - 0.1 12.0 0.1 0.19 11.2 0.0 1.4 1 1 0 1 1 1 0 Chromatin associated protein KTI12 MeaB PF03308.16 gi|21226727|ref|NP_632649.1| - 0.12 11.3 0.4 0.25 10.3 0.1 1.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ADK PF00406.22 gi|21226727|ref|NP_632649.1| - 0.13 12.3 0.1 0.4 10.8 0.1 1.9 1 1 0 1 1 1 0 Adenylate kinase CTP_transf_like PF01467.26 gi|21226728|ref|NP_632650.1| - 3.8e-14 53.1 0.2 1.3e-13 51.4 0.2 1.8 1 1 0 1 1 1 1 Cytidylyltransferase-like ATP-sulfurylase PF01747.17 gi|21226728|ref|NP_632650.1| - 0.032 13.7 0.5 1.9 7.9 0.0 2.3 1 1 1 2 2 2 0 ATP-sulfurylase FrhB_FdhB_C PF04432.13 gi|21226729|ref|NP_632651.1| - 1.2e-37 129.2 0.1 2e-37 128.4 0.1 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|21226729|ref|NP_632651.1| - 2.4e-16 59.6 0.0 4.1e-16 58.9 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_9 PF13187.6 gi|21226729|ref|NP_632651.1| - 1.4e-05 25.1 8.1 1.4e-05 25.1 8.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21226729|ref|NP_632651.1| - 1.5e-05 24.6 17.8 0.00042 20.0 6.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21226729|ref|NP_632651.1| - 2e-05 24.9 5.0 5.7e-05 23.5 5.0 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21226729|ref|NP_632651.1| - 4.5e-05 24.0 9.5 4.5e-05 24.0 9.5 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21226729|ref|NP_632651.1| - 0.00066 19.8 17.8 0.03 14.4 3.8 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226729|ref|NP_632651.1| - 0.00086 19.8 5.2 0.00086 19.8 5.2 2.0 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21226729|ref|NP_632651.1| - 0.0028 17.8 18.6 0.0067 16.5 13.5 2.7 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21226729|ref|NP_632651.1| - 0.0079 17.1 10.9 0.0079 17.1 10.9 2.6 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|21226729|ref|NP_632651.1| - 0.008 16.2 15.0 0.094 12.9 3.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21226729|ref|NP_632651.1| - 0.025 15.1 1.5 0.025 15.1 1.5 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21226729|ref|NP_632651.1| - 0.027 14.6 5.3 0.027 14.6 5.3 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain CTP_transf_like PF01467.26 gi|21226729|ref|NP_632651.1| - 0.042 14.0 0.0 0.071 13.3 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase-like Bac_luciferase PF00296.20 gi|21226730|ref|NP_632652.1| - 2e-63 214.7 0.0 2.5e-63 214.4 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase DUF2180 PF09947.9 gi|21226731|ref|NP_632653.1| - 1e-33 115.1 7.0 1.2e-33 114.9 7.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) DZR PF12773.7 gi|21226731|ref|NP_632653.1| - 0.23 11.5 5.6 2.4 8.2 5.6 2.1 1 1 0 1 1 1 0 Double zinc ribbon DUF2180 PF09947.9 gi|21226732|ref|NP_632654.1| - 1.3e-28 98.7 5.7 1.6e-28 98.5 5.7 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) Tnp_zf-ribbon_2 PF13842.6 gi|21226732|ref|NP_632654.1| - 0.00028 21.6 5.1 0.0021 18.8 1.3 2.2 2 0 0 2 2 2 1 DDE_Tnp_1-like zinc-ribbon zf-UBP_var PF17807.1 gi|21226732|ref|NP_632654.1| - 0.012 15.4 1.3 0.02 14.6 1.3 1.3 1 0 0 1 1 1 0 Variant UBP zinc finger FYVE PF01363.21 gi|21226732|ref|NP_632654.1| - 0.045 13.9 2.4 0.097 12.8 2.4 1.6 1 1 0 1 1 1 0 FYVE zinc finger CMD PF02627.20 gi|21226733|ref|NP_632655.1| - 5.2e-17 61.7 0.1 6.3e-17 61.4 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Desulfoferrodox PF01880.18 gi|21226734|ref|NP_632656.1| - 5.2e-29 100.7 2.0 1.7e-28 99.1 2.0 1.7 1 1 0 1 1 1 1 Desulfoferrodoxin Cytochrome_C554 PF13435.6 gi|21226735|ref|NP_632657.1| - 1.8e-09 38.4 4.0 3.8e-06 27.7 0.1 2.9 2 0 0 2 2 2 2 Cytochrome c554 and c-prime Cytochrome_C7 PF14522.6 gi|21226735|ref|NP_632657.1| - 5.9e-07 29.4 8.4 0.0045 17.0 1.7 3.2 1 1 2 3 3 3 3 Cytochrome c7 and related cytochrome c C1_1 PF00130.22 gi|21226735|ref|NP_632657.1| - 3.7e-05 23.5 4.7 0.056 13.3 0.1 3.6 3 1 0 3 3 3 2 Phorbol esters/diacylglycerol binding domain (C1 domain) Cytochrom_c3_2 PF14537.6 gi|21226735|ref|NP_632657.1| - 0.0012 19.2 11.4 1.4 9.4 1.5 4.0 1 1 2 3 3 3 3 Cytochrome c3 Cytochrome_CBB3 PF13442.6 gi|21226735|ref|NP_632657.1| - 0.0082 16.4 14.6 2.7 8.4 0.0 5.0 3 2 2 5 5 5 1 Cytochrome C oxidase, cbb3-type, subunit III GFA PF04828.14 gi|21226735|ref|NP_632657.1| - 0.046 14.1 0.5 0.31 11.4 0.0 2.5 3 0 0 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_10 PF10058.9 gi|21226735|ref|NP_632657.1| - 0.059 13.1 0.3 46 3.9 0.0 3.4 3 0 0 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein DZR PF12773.7 gi|21226735|ref|NP_632657.1| - 0.16 12.0 5.5 5.5 7.1 0.1 3.1 3 0 0 3 3 3 0 Double zinc ribbon Paired_CXXCH_1 PF09699.10 gi|21226735|ref|NP_632657.1| - 0.17 11.7 15.5 26 4.7 0.2 4.8 3 2 2 5 5 5 0 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_NNT PF03264.14 gi|21226735|ref|NP_632657.1| - 0.24 11.1 12.8 1.3 8.7 0.3 3.4 2 2 1 3 3 3 0 NapC/NirT cytochrome c family, N-terminal region FMN_red PF03358.15 gi|21226736|ref|NP_632658.1| - 2.3e-32 111.9 0.0 3.2e-32 111.4 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21226736|ref|NP_632658.1| - 2.4e-05 24.1 0.0 4.2e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin-like fold Flavoprotein PF02441.19 gi|21226737|ref|NP_632659.1| - 1.3e-18 67.3 0.0 2.3e-18 66.4 0.0 1.4 1 1 0 1 1 1 1 Flavoprotein Rubrerythrin PF02915.17 gi|21226738|ref|NP_632660.1| - 9.6e-12 45.5 9.6 1.6e-11 44.8 9.6 1.4 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|21226738|ref|NP_632660.1| - 6.9e-05 22.8 5.2 0.00015 21.7 5.2 1.6 1 1 0 1 1 1 1 Ferritin-like domain Ferritin_2 PF13668.6 gi|21226738|ref|NP_632660.1| - 0.0001 22.5 1.3 0.27 11.4 0.1 2.1 2 0 0 2 2 2 2 Ferritin-like domain DUF2383 PF09537.10 gi|21226738|ref|NP_632660.1| - 0.00018 21.8 4.6 0.14 12.5 0.3 2.2 1 1 0 2 2 2 2 Domain of unknown function (DUF2383) COQ7 PF03232.13 gi|21226738|ref|NP_632660.1| - 0.011 15.5 1.6 0.14 12.0 0.2 2.1 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 DUF2777 PF10949.8 gi|21226738|ref|NP_632660.1| - 0.02 14.6 1.1 0.063 12.9 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2777) AAL_decarboxy PF03306.13 gi|21226741|ref|NP_632663.1| - 9.1e-85 283.4 0.0 1.1e-84 283.2 0.0 1.0 1 0 0 1 1 1 1 Alpha-acetolactate decarboxylase ANTH PF07651.16 gi|21226742|ref|NP_632664.1| - 0.05 12.6 0.1 0.05 12.6 0.1 1.1 1 0 0 1 1 1 0 ANTH domain Iso_dh PF00180.20 gi|21226744|ref|NP_632666.1| - 1e-94 317.6 0.0 1.2e-94 317.4 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Mntp PF02659.15 gi|21226745|ref|NP_632667.1| - 9.9e-51 171.5 8.6 9.9e-51 171.5 8.6 2.0 2 0 0 2 2 2 1 Putative manganese efflux pump DUF373 PF04123.13 gi|21226745|ref|NP_632667.1| - 0.011 15.2 0.9 0.012 15.1 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF373) Aconitase_C PF00694.19 gi|21226747|ref|NP_632669.1| - 6.2e-20 71.9 0.0 8.9e-20 71.3 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|21226747|ref|NP_632669.1| - 6.2e-05 22.7 0.0 0.0055 16.4 0.0 2.2 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus STT3 PF02516.14 gi|21226748|ref|NP_632670.1| - 1.8e-33 116.3 31.8 3.9e-33 115.1 31.8 1.5 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit AglB_L1 PF18079.1 gi|21226748|ref|NP_632670.1| - 2.5e-28 98.2 1.4 3.9e-27 94.4 3.9 1.8 2 0 0 2 2 2 1 Archaeal glycosylation protein B long peripheral domain STT3 PF02516.14 gi|21226749|ref|NP_632671.1| - 5.2e-32 111.4 27.4 2.1e-31 109.4 27.3 2.0 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit AglB_L1 PF18079.1 gi|21226749|ref|NP_632671.1| - 1.5e-27 95.7 2.7 2.8e-27 94.9 2.7 1.5 1 0 0 1 1 1 1 Archaeal glycosylation protein B long peripheral domain YwiC PF14256.6 gi|21226749|ref|NP_632671.1| - 1.6 9.1 15.1 0.31 11.4 1.5 3.4 3 1 1 4 4 4 0 YwiC-like protein Glycos_transf_1 PF00534.20 gi|21226750|ref|NP_632672.1| - 3.4e-20 72.3 0.0 5.4e-20 71.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21226750|ref|NP_632672.1| - 1.3e-16 61.2 0.0 2.1e-16 60.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21226750|ref|NP_632672.1| - 1.1e-14 54.8 0.0 1.9e-14 54.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|21226750|ref|NP_632672.1| - 5.8e-09 36.6 0.0 2.6e-08 34.5 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|21226750|ref|NP_632672.1| - 0.00014 21.9 0.0 0.00025 21.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|21226751|ref|NP_632673.1| - 3.2e-35 121.6 0.4 9.3e-35 120.1 0.5 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|21226751|ref|NP_632673.1| - 2.6e-31 108.5 1.1 3.7e-31 108.0 0.4 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21226751|ref|NP_632673.1| - 1.5e-23 83.7 0.0 2.8e-23 82.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21226751|ref|NP_632673.1| - 4.7e-21 75.9 0.0 1.1e-20 74.7 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|21226751|ref|NP_632673.1| - 8.4e-11 42.1 0.1 1.5e-10 41.2 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.11 gi|21226751|ref|NP_632673.1| - 7.9e-05 22.5 0.5 0.027 14.1 0.0 2.4 1 1 1 2 2 2 2 Starch synthase catalytic domain DUF2325 PF10087.9 gi|21226751|ref|NP_632673.1| - 0.0012 18.9 0.0 0.39 10.9 0.0 3.1 3 0 0 3 3 3 1 Uncharacterized protein conserved in bacteria (DUF2325) Glyco_trans_1_2 PF13524.6 gi|21226751|ref|NP_632673.1| - 0.089 13.2 0.0 0.22 11.9 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|21226752|ref|NP_632674.1| - 2.4e-41 141.2 0.2 4e-41 140.4 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21226752|ref|NP_632674.1| - 7.1e-31 107.4 0.0 1e-30 106.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|21226752|ref|NP_632674.1| - 1.6e-10 41.2 0.0 4.4e-10 39.8 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21226752|ref|NP_632674.1| - 1.7e-10 41.2 0.2 5.1e-10 39.6 0.1 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_transf_20 PF00982.21 gi|21226752|ref|NP_632674.1| - 2.4e-05 23.2 0.1 5.7e-05 22.0 0.1 1.7 1 1 0 1 1 1 1 Glycosyltransferase family 20 Glycogen_syn PF05693.13 gi|21226752|ref|NP_632674.1| - 0.043 12.4 0.0 0.079 11.5 0.0 1.4 1 0 0 1 1 1 0 Glycogen synthase HD_2 PF12917.7 gi|21226752|ref|NP_632674.1| - 0.064 13.0 0.1 0.099 12.4 0.1 1.3 1 0 0 1 1 1 0 HD containing hydrolase-like enzyme Glycos_transf_2 PF00535.26 gi|21226753|ref|NP_632675.1| - 6.8e-20 71.6 0.4 8.6e-09 35.4 0.0 2.8 2 1 1 3 3 3 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21226753|ref|NP_632675.1| - 7.2e-09 35.9 0.0 0.0025 17.7 0.0 2.3 2 1 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|21226753|ref|NP_632675.1| - 0.00088 19.2 0.0 0.0026 17.7 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase family group 2 DUF4199 PF13858.6 gi|21226753|ref|NP_632675.1| - 0.11 12.9 2.2 0.21 12.0 2.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) Glycos_transf_2 PF00535.26 gi|21226754|ref|NP_632676.1| - 2.3e-41 141.4 0.1 3.3e-41 140.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|21226754|ref|NP_632676.1| - 1.9e-17 63.6 0.1 2.7e-17 63.1 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|21226754|ref|NP_632676.1| - 8e-17 61.9 0.0 1e-16 61.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|21226754|ref|NP_632676.1| - 2e-06 28.2 0.2 3.7e-06 27.4 0.2 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 GNT-I PF03071.15 gi|21226754|ref|NP_632676.1| - 0.028 13.2 0.0 0.037 12.8 0.0 1.2 1 0 0 1 1 1 0 GNT-I family Glycos_transf_2 PF00535.26 gi|21226755|ref|NP_632677.1| - 1.5e-26 93.3 1.4 2.1e-26 92.8 1.2 1.3 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21226755|ref|NP_632677.1| - 8.7e-09 35.6 0.0 1.2e-08 35.1 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|21226755|ref|NP_632677.1| - 2.2e-07 30.6 2.1 2.2e-07 30.6 2.1 1.5 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.6 gi|21226755|ref|NP_632677.1| - 0.00033 20.4 2.0 0.0011 18.7 2.0 1.9 1 1 0 1 1 1 1 Glycosyltransferase like family Glyco_tranf_2_4 PF13704.6 gi|21226755|ref|NP_632677.1| - 0.064 13.8 0.0 0.12 12.9 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.20 gi|21226756|ref|NP_632678.1| - 2.8e-27 95.4 0.0 4.9e-27 94.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21226756|ref|NP_632678.1| - 1.3e-19 70.9 0.0 1.9e-19 70.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21226756|ref|NP_632678.1| - 1.5e-12 47.9 0.3 4.5e-12 46.3 0.3 1.9 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|21226756|ref|NP_632678.1| - 1.9e-06 28.2 0.0 3.6e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21226756|ref|NP_632678.1| - 0.00029 21.3 0.0 0.0007 20.1 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Phage_portal PF04860.12 gi|21226756|ref|NP_632678.1| - 0.016 14.4 0.0 0.03 13.5 0.0 1.4 1 0 0 1 1 1 0 Phage portal protein ABC_tran PF00005.27 gi|21226758|ref|NP_632680.1| - 3.2e-22 79.5 0.0 6.5e-22 78.5 0.0 1.5 1 0 0 1 1 1 1 ABC transporter Wzt_C PF14524.6 gi|21226758|ref|NP_632680.1| - 2.1e-11 44.0 0.7 4.7e-11 42.9 0.7 1.6 1 0 0 1 1 1 1 Wzt C-terminal domain AAA_21 PF13304.6 gi|21226758|ref|NP_632680.1| - 1e-05 25.5 0.7 5.7e-05 23.1 0.3 2.3 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21226758|ref|NP_632680.1| - 0.0011 18.7 0.0 0.0028 17.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|21226758|ref|NP_632680.1| - 0.0018 18.8 1.4 0.0055 17.2 0.1 2.4 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|21226758|ref|NP_632680.1| - 0.0078 16.0 0.2 0.0078 16.0 0.2 3.1 2 1 2 4 4 4 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|21226758|ref|NP_632680.1| - 0.014 15.3 0.1 0.049 13.5 0.1 1.9 1 1 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 gi|21226758|ref|NP_632680.1| - 0.084 13.0 1.5 0.15 12.1 0.2 2.1 3 0 0 3 3 3 0 50S ribosome-binding GTPase AAA_30 PF13604.6 gi|21226758|ref|NP_632680.1| - 0.15 11.8 0.1 0.54 9.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ABC2_membrane PF01061.24 gi|21226759|ref|NP_632681.1| - 3.7e-24 85.3 26.3 6e-24 84.6 22.9 2.0 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|21226759|ref|NP_632681.1| - 0.00089 18.5 21.7 0.00089 18.5 21.7 2.0 2 0 0 2 2 2 1 ABC-2 family transporter protein RseC_MucC PF04246.12 gi|21226759|ref|NP_632681.1| - 0.98 9.4 10.5 1.6 8.7 0.1 3.2 3 0 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC Epimerase PF01370.21 gi|21226760|ref|NP_632682.1| - 1.9e-82 276.4 0.0 2.2e-82 276.2 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|21226760|ref|NP_632682.1| - 3.5e-22 79.2 0.0 1.3e-21 77.4 0.0 1.9 1 1 1 2 2 2 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|21226760|ref|NP_632682.1| - 1.8e-07 30.6 0.0 3.6e-07 29.6 0.0 1.8 1 1 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|21226760|ref|NP_632682.1| - 7.6e-07 28.5 0.0 4.7e-05 22.7 0.0 2.3 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 gi|21226761|ref|NP_632683.1| - 1.8e-165 550.2 0.0 2.1e-165 550.1 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|21226761|ref|NP_632683.1| - 1.3e-76 257.3 0.1 1.6e-76 257.0 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|21226761|ref|NP_632683.1| - 1.8e-06 27.3 0.0 2.8e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|21226761|ref|NP_632683.1| - 0.00012 21.3 0.0 0.00019 20.7 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3383 PF11863.8 gi|21226761|ref|NP_632683.1| - 0.18 10.8 0.0 0.29 10.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3383) MannoseP_isomer PF01050.18 gi|21226762|ref|NP_632684.1| - 3.7e-54 182.7 0.0 5.7e-54 182.1 0.0 1.3 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase NTP_transferase PF00483.23 gi|21226762|ref|NP_632684.1| - 5.2e-40 137.6 0.0 9.1e-40 136.8 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyl transferase Cupin_2 PF07883.11 gi|21226762|ref|NP_632684.1| - 7.2e-11 41.6 0.0 1.3e-10 40.8 0.0 1.4 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|21226762|ref|NP_632684.1| - 0.016 15.1 0.0 0.03 14.2 0.0 1.4 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|21226762|ref|NP_632684.1| - 0.049 13.3 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Methyltransf_31 PF13847.6 gi|21226763|ref|NP_632685.1| - 1.2e-39 135.5 0.0 1.7e-39 135.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21226763|ref|NP_632685.1| - 2e-24 86.1 0.0 4.4e-24 85.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21226763|ref|NP_632685.1| - 3.3e-23 82.2 0.0 8e-23 80.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21226763|ref|NP_632685.1| - 8.5e-21 74.4 0.0 1.4e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|21226763|ref|NP_632685.1| - 1.2e-12 48.0 0.0 1.7e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21226763|ref|NP_632685.1| - 3e-12 46.8 0.0 4.6e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|21226763|ref|NP_632685.1| - 3e-11 43.9 0.0 5.3e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|21226763|ref|NP_632685.1| - 7.9e-08 32.4 0.3 3.5e-07 30.3 0.3 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase UPF0020 PF01170.18 gi|21226763|ref|NP_632685.1| - 1.4e-07 31.4 0.0 2.5e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|21226763|ref|NP_632685.1| - 3.6e-07 29.9 0.0 6.1e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|21226763|ref|NP_632685.1| - 4.8e-06 26.2 0.0 6.8e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 gi|21226763|ref|NP_632685.1| - 1.4e-05 25.1 0.0 2.2e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|21226763|ref|NP_632685.1| - 0.00015 21.4 0.0 0.00022 20.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase FtsJ PF01728.19 gi|21226763|ref|NP_632685.1| - 0.00028 21.0 0.0 0.00035 20.7 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase CMAS PF02353.20 gi|21226763|ref|NP_632685.1| - 0.00064 19.1 0.0 0.00093 18.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|21226763|ref|NP_632685.1| - 0.00067 19.2 0.0 0.0017 17.8 0.0 1.7 1 1 0 2 2 2 1 Putative methyltransferase Met_10 PF02475.16 gi|21226763|ref|NP_632685.1| - 0.0058 16.4 0.1 0.0087 15.8 0.1 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltr_RsmB-F PF01189.17 gi|21226763|ref|NP_632685.1| - 0.006 16.2 0.0 0.014 15.1 0.0 1.6 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_18 PF12847.7 gi|21226763|ref|NP_632685.1| - 0.017 15.0 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_3 PF01596.17 gi|21226763|ref|NP_632685.1| - 0.031 13.5 0.0 0.047 12.9 0.0 1.4 1 0 0 1 1 1 0 O-methyltransferase DOT1 PF08123.13 gi|21226763|ref|NP_632685.1| - 0.065 12.8 0.1 0.1 12.1 0.1 1.4 1 1 0 1 1 1 0 Histone methylation protein DOT1 Fibrillarin PF01269.17 gi|21226763|ref|NP_632685.1| - 0.085 12.0 0.0 0.56 9.3 0.0 1.9 2 0 0 2 2 2 0 Fibrillarin Methyltransf_24 PF13578.6 gi|21226763|ref|NP_632685.1| - 0.12 13.4 0.0 0.18 12.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain GidB PF02527.15 gi|21226763|ref|NP_632685.1| - 0.13 11.5 0.1 0.3 10.4 0.1 1.6 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G N6_N4_Mtase PF01555.18 gi|21226763|ref|NP_632685.1| - 0.22 11.2 0.0 16 5.1 0.0 2.1 2 0 0 2 2 2 0 DNA methylase HTH_5 PF01022.20 gi|21226764|ref|NP_632686.1| - 3.4e-13 49.2 0.2 6e-13 48.4 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21226764|ref|NP_632686.1| - 7.1e-10 38.8 0.0 1e-09 38.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|21226764|ref|NP_632686.1| - 0.0035 17.7 0.2 0.0066 16.8 0.2 1.5 1 1 0 1 1 1 1 Penicillinase repressor HTH_24 PF13412.6 gi|21226764|ref|NP_632686.1| - 0.037 13.6 0.0 2.5 7.7 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DHODB_Fe-S_bind PF10418.9 gi|21226765|ref|NP_632687.1| - 4.4e-13 48.8 4.0 9.2e-13 47.8 4.0 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|21226765|ref|NP_632687.1| - 6.5e-08 33.2 0.0 1.7e-07 31.9 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|21226765|ref|NP_632687.1| - 0.0022 18.3 0.0 0.0038 17.5 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Cpn10 PF00166.21 gi|21226765|ref|NP_632687.1| - 0.0099 15.9 0.6 0.044 13.9 0.0 2.3 1 1 1 2 2 2 1 Chaperonin 10 Kd subunit Pept_tRNA_hydro PF01195.19 gi|21226765|ref|NP_632687.1| - 0.049 13.6 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase NAD_binding_6 PF08030.12 gi|21226765|ref|NP_632687.1| - 0.09 12.9 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Fer4_20 PF14691.6 gi|21226766|ref|NP_632688.1| - 1e-44 150.9 6.0 1.6e-44 150.3 6.0 1.3 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.14 gi|21226766|ref|NP_632688.1| - 2.6e-37 128.6 1.8 3.6e-37 128.2 1.8 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|21226766|ref|NP_632688.1| - 1e-17 64.5 3.6 1.1e-08 35.5 0.2 3.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|21226766|ref|NP_632688.1| - 1.5e-11 44.1 0.8 2.5e-06 27.0 0.1 3.3 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|21226766|ref|NP_632688.1| - 1.2e-08 35.1 1.2 2.5e-08 34.0 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 gi|21226766|ref|NP_632688.1| - 3.7e-08 33.7 0.6 0.0026 18.2 0.2 2.8 2 1 0 2 2 2 2 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|21226766|ref|NP_632688.1| - 1e-07 31.5 5.6 0.0021 17.4 0.9 2.7 2 1 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 gi|21226766|ref|NP_632688.1| - 1.1e-07 31.6 3.2 3.6e-05 23.3 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|21226766|ref|NP_632688.1| - 5.7e-06 25.7 0.2 4.7e-05 22.8 0.0 2.1 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 gi|21226766|ref|NP_632688.1| - 1.3e-05 24.5 1.2 1.3e-05 24.5 1.2 2.8 3 0 0 3 3 3 1 FAD binding domain HI0933_like PF03486.14 gi|21226766|ref|NP_632688.1| - 3.2e-05 22.8 0.4 3.2e-05 22.8 0.4 2.0 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 gi|21226766|ref|NP_632688.1| - 3.3e-05 23.2 3.2 0.00048 19.3 0.0 2.8 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|21226766|ref|NP_632688.1| - 0.00019 20.8 0.6 0.00071 18.9 0.1 1.9 2 0 0 2 2 2 1 FAD binding domain ELFV_dehydrog PF00208.21 gi|21226766|ref|NP_632688.1| - 0.00044 20.0 0.1 0.22 11.2 0.0 2.2 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 2-Hacid_dh_C PF02826.19 gi|21226766|ref|NP_632688.1| - 0.0006 19.2 0.0 0.84 9.0 0.0 2.5 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FMO-like PF00743.19 gi|21226766|ref|NP_632688.1| - 0.0013 17.2 0.0 0.36 9.2 0.0 2.3 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Shikimate_DH PF01488.20 gi|21226766|ref|NP_632688.1| - 0.0016 18.5 0.0 3.3 7.8 0.1 4.0 4 0 0 4 4 4 1 Shikimate / quinate 5-dehydrogenase PALP PF00291.25 gi|21226766|ref|NP_632688.1| - 0.0019 17.7 0.0 1.9 7.8 0.0 2.7 2 1 1 3 3 3 2 Pyridoxal-phosphate dependent enzyme DAO PF01266.24 gi|21226766|ref|NP_632688.1| - 0.0025 17.5 0.5 0.0025 17.5 0.5 2.6 1 1 0 2 2 2 1 FAD dependent oxidoreductase F420_oxidored PF03807.17 gi|21226766|ref|NP_632688.1| - 0.0034 17.9 0.4 1.7 9.3 0.0 3.3 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent Amino_oxidase PF01593.24 gi|21226766|ref|NP_632688.1| - 0.0066 15.8 0.1 0.0066 15.8 0.1 1.7 2 0 0 2 2 1 1 Flavin containing amine oxidoreductase Fer4_18 PF13746.6 gi|21226766|ref|NP_632688.1| - 0.0093 16.2 1.7 0.012 15.8 0.7 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain K_oxygenase PF13434.6 gi|21226766|ref|NP_632688.1| - 0.011 14.9 0.1 1.7 7.7 0.0 2.7 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|21226766|ref|NP_632688.1| - 0.034 14.1 0.2 0.15 12.1 0.1 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|21226766|ref|NP_632688.1| - 0.037 13.6 0.1 0.17 11.4 0.0 2.1 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Oxidored_nitro PF00148.19 gi|21226766|ref|NP_632688.1| - 0.049 12.3 1.4 3.6 6.2 0.1 2.5 2 1 1 3 3 3 0 Nitrogenase component 1 type Oxidoreductase YjeF_N PF03853.15 gi|21226766|ref|NP_632688.1| - 0.054 13.4 0.0 4.2 7.2 0.0 2.3 2 0 0 2 2 2 0 YjeF-related protein N-terminus TrkA_N PF02254.18 gi|21226766|ref|NP_632688.1| - 0.11 12.8 0.2 11 6.4 0.0 2.6 2 0 0 2 2 2 0 TrkA-N domain 3HCDH_N PF02737.18 gi|21226766|ref|NP_632688.1| - 0.11 12.3 0.2 0.82 9.5 0.0 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 gi|21226766|ref|NP_632688.1| - 0.12 11.4 0.2 0.12 11.4 0.2 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|21226766|ref|NP_632688.1| - 0.42 9.4 3.6 0.2 10.5 0.3 1.8 2 0 0 2 2 2 0 Tryptophan halogenase AdoHcyase_NAD PF00670.21 gi|21226766|ref|NP_632688.1| - 0.89 9.6 5.4 12 5.9 0.0 3.0 3 0 0 3 3 3 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Fer4_7 PF12838.7 gi|21226766|ref|NP_632688.1| - 7 7.3 10.1 0.14 12.8 0.7 2.6 2 1 1 3 3 2 0 4Fe-4S dicluster domain DUF5618 PF18498.1 gi|21226767|ref|NP_632689.1| - 0.007 16.6 0.9 0.015 15.5 0.9 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5618) FTHFS PF01268.19 gi|21226767|ref|NP_632689.1| - 0.084 11.1 0.5 0.11 10.6 0.5 1.2 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase NikR_C PF08753.11 gi|21226768|ref|NP_632690.1| - 1e-28 99.3 1.4 1.5e-28 98.8 1.4 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|21226768|ref|NP_632690.1| - 8.6e-10 38.2 0.9 1.5e-09 37.4 0.1 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|21226768|ref|NP_632690.1| - 0.012 15.7 0.0 0.028 14.5 0.0 1.6 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system RHH_8 PF17723.1 gi|21226768|ref|NP_632690.1| - 0.031 14.4 0.0 0.044 14.0 0.0 1.4 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family Nitroreductase PF00881.24 gi|21226769|ref|NP_632691.1| - 2.9e-33 115.3 0.3 4.1e-19 69.3 0.0 2.0 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|21226769|ref|NP_632691.1| - 6e-17 61.9 0.1 5e-06 26.3 0.0 3.0 1 1 2 3 3 3 3 Putative TM nitroreductase IlvN PF07991.12 gi|21226770|ref|NP_632692.1| - 2e-80 268.2 0.5 3.1e-80 267.6 0.5 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|21226770|ref|NP_632692.1| - 2.2e-60 203.1 0.7 3.2e-60 202.6 0.7 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 gi|21226770|ref|NP_632692.1| - 2.5e-07 30.2 0.0 4.8e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|21226770|ref|NP_632692.1| - 6.7e-07 29.6 0.0 1.2e-06 28.8 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|21226770|ref|NP_632692.1| - 2e-06 28.3 0.0 4.6e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 gi|21226770|ref|NP_632692.1| - 0.0014 18.8 0.0 0.0024 17.9 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CoA_binding PF02629.19 gi|21226770|ref|NP_632692.1| - 0.015 15.9 0.0 0.038 14.7 0.0 1.7 1 0 0 1 1 1 0 CoA binding domain Nitro_FeMo-Co PF02579.17 gi|21226770|ref|NP_632692.1| - 0.02 15.2 0.0 0.052 13.9 0.0 1.7 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor ApbA PF02558.16 gi|21226770|ref|NP_632692.1| - 0.032 13.9 0.1 0.072 12.7 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Mur_ligase PF01225.25 gi|21226770|ref|NP_632692.1| - 0.083 13.2 0.2 0.6 10.5 0.2 2.4 1 1 0 1 1 1 0 Mur ligase family, catalytic domain ALS_ss_C PF10369.9 gi|21226771|ref|NP_632693.1| - 1.7e-31 108.2 6.3 2.6e-31 107.6 2.3 2.1 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|21226771|ref|NP_632693.1| - 4.5e-19 68.0 0.4 1.7e-17 63.0 0.2 2.4 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 gi|21226771|ref|NP_632693.1| - 1.4e-17 63.1 1.2 1.7e-16 59.7 0.3 2.4 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|21226771|ref|NP_632693.1| - 7.5e-06 26.4 1.3 7.5e-06 26.4 1.3 1.7 2 1 0 2 2 2 1 ACT domain SLS PF14611.6 gi|21226771|ref|NP_632693.1| - 0.028 14.3 0.7 1.8 8.3 0.3 2.0 1 1 1 2 2 2 0 Mitochondrial inner-membrane-bound regulator YbbR PF07949.12 gi|21226771|ref|NP_632693.1| - 0.12 12.8 4.3 4.1 7.8 0.0 2.4 2 0 0 2 2 2 0 YbbR-like protein TPP_enzyme_N PF02776.18 gi|21226772|ref|NP_632694.1| - 1.8e-60 203.5 0.1 2.4e-59 199.8 0.0 2.6 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|21226772|ref|NP_632694.1| - 5e-56 188.7 0.0 4.6e-55 185.6 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|21226772|ref|NP_632694.1| - 6.5e-53 178.1 0.1 1.5e-52 177.0 0.1 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 gi|21226772|ref|NP_632694.1| - 0.024 14.4 0.0 0.048 13.4 0.0 1.5 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HMGL-like PF00682.19 gi|21226773|ref|NP_632695.1| - 9.2e-75 251.6 1.2 9.2e-75 251.6 1.2 1.6 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 gi|21226773|ref|NP_632695.1| - 1.4e-36 125.4 1.9 2.5e-36 124.5 1.9 1.4 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain Acetyltransf_6 PF13480.7 gi|21226774|ref|NP_632696.1| - 3.7e-09 36.9 0.0 4.6e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|21226774|ref|NP_632696.1| - 2.3e-06 26.8 8.1 7.7e-06 25.0 1.2 2.1 1 1 1 2 2 2 2 FemAB family RB_A PF01858.17 gi|21226774|ref|NP_632696.1| - 0.12 12.2 0.2 0.16 11.8 0.2 1.2 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain Peptidase_M42 PF05343.14 gi|21226775|ref|NP_632697.1| - 6.1e-116 386.5 0.9 7.1e-116 386.3 0.9 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|21226775|ref|NP_632697.1| - 1.7e-08 34.4 0.2 6e-08 32.6 0.2 1.8 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|21226775|ref|NP_632697.1| - 0.0052 16.5 0.0 0.59 9.8 0.0 2.8 2 1 0 2 2 2 1 Peptidase family M28 Peptidase_M18 PF02127.15 gi|21226775|ref|NP_632697.1| - 0.06 12.1 0.0 0.1 11.4 0.0 1.3 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) Prefoldin_2 PF01920.20 gi|21226776|ref|NP_632698.1| - 1.2e-24 86.3 17.4 1.3e-24 86.2 17.4 1.0 1 0 0 1 1 1 1 Prefoldin subunit IMS PF00817.20 gi|21226776|ref|NP_632698.1| - 0.0081 16.2 1.2 0.011 15.8 1.2 1.1 1 0 0 1 1 1 1 impB/mucB/samB family Snf7 PF03357.21 gi|21226776|ref|NP_632698.1| - 0.012 15.2 14.2 0.21 11.2 5.0 2.2 2 0 0 2 2 2 0 Snf7 PI_PP_I PF18363.1 gi|21226776|ref|NP_632698.1| - 0.053 13.7 1.7 0.78 10.0 0.1 2.1 2 0 0 2 2 2 0 Phosphoinositide phosphatase insertion domain Cep57_MT_bd PF06657.13 gi|21226776|ref|NP_632698.1| - 0.065 13.7 12.0 0.63 10.5 2.4 2.4 2 1 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 GAS PF13851.6 gi|21226776|ref|NP_632698.1| - 0.23 10.8 17.7 0.099 12.0 4.1 2.0 1 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding DHR10 PF18595.1 gi|21226776|ref|NP_632698.1| - 0.34 11.0 19.0 1.4 9.0 4.1 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF3450 PF11932.8 gi|21226776|ref|NP_632698.1| - 0.51 9.6 21.9 1.1 8.5 4.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) ZapB PF06005.12 gi|21226776|ref|NP_632698.1| - 0.53 10.8 17.2 2.7 8.5 5.5 2.2 2 0 0 2 2 2 0 Cell division protein ZapB DUF1664 PF07889.12 gi|21226776|ref|NP_632698.1| - 0.57 10.2 7.2 5.8 7.0 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DivIC PF04977.15 gi|21226776|ref|NP_632698.1| - 0.85 9.4 16.9 0.12 12.1 4.1 2.9 2 1 0 2 2 2 0 Septum formation initiator Nup54 PF13874.6 gi|21226776|ref|NP_632698.1| - 1.2 9.2 16.4 12 6.0 16.4 2.1 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 TSNAXIP1_N PF15739.5 gi|21226776|ref|NP_632698.1| - 1.7 9.1 13.1 0.76 10.2 4.6 2.1 2 0 0 2 2 2 0 Translin-associated factor X-interacting N-terminus CENP-F_leu_zip PF10473.9 gi|21226776|ref|NP_632698.1| - 2 8.4 20.1 59 3.7 20.6 2.0 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 NBD_C PF17042.5 gi|21226776|ref|NP_632698.1| - 2 8.9 7.5 3 8.3 7.5 1.2 1 0 0 1 1 1 0 Nucleotide-binding C-terminal domain V_ATPase_I PF01496.19 gi|21226776|ref|NP_632698.1| - 2.6 5.9 7.6 3.2 5.5 7.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3552 PF12072.8 gi|21226776|ref|NP_632698.1| - 2.6 7.4 20.9 0.33 10.3 6.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) YojJ PF10372.9 gi|21226776|ref|NP_632698.1| - 3 8.0 9.0 0.58 10.3 0.4 2.4 2 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Com_YlbF PF06133.11 gi|21226776|ref|NP_632698.1| - 3.1 8.5 19.1 1.2 9.7 12.1 2.3 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA APG6_N PF17675.1 gi|21226776|ref|NP_632698.1| - 3.6 8.1 22.3 98 3.5 22.1 2.2 1 1 0 1 1 1 0 Apg6 coiled-coil region Spc24 PF08286.11 gi|21226776|ref|NP_632698.1| - 4.6 7.5 14.7 6 7.2 5.9 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 LPP PF04728.13 gi|21226776|ref|NP_632698.1| - 5.3 7.5 14.6 24 5.4 7.3 2.9 2 2 1 3 3 3 0 Lipoprotein leucine-zipper FlxA PF14282.6 gi|21226776|ref|NP_632698.1| - 8.6 6.4 29.2 4.1 7.4 4.4 2.4 2 1 0 2 2 2 0 FlxA-like protein DHHA1 PF02272.19 gi|21226777|ref|NP_632699.1| - 1.2e-12 48.4 1.3 2.2e-12 47.6 1.3 1.5 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.20 gi|21226777|ref|NP_632699.1| - 6.3e-12 45.6 0.1 1.3e-11 44.6 0.1 1.5 1 0 0 1 1 1 1 DHH family AMP-binding_C_2 PF14535.6 gi|21226778|ref|NP_632700.1| - 6.5e-32 109.7 0.1 1.7e-31 108.4 0.0 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|21226778|ref|NP_632700.1| - 2.6e-21 75.7 0.1 8e-21 74.1 0.0 1.7 2 0 0 2 2 2 1 AMP-binding enzyme GH3 PF03321.13 gi|21226778|ref|NP_632700.1| - 0.0064 15.4 0.0 0.056 12.3 0.0 2.0 2 0 0 2 2 2 1 GH3 auxin-responsive promoter ACT PF01842.25 gi|21226779|ref|NP_632701.1| - 3.2e-19 68.4 0.2 3.8e-09 36.2 0.0 2.3 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 gi|21226779|ref|NP_632701.1| - 1.7e-07 30.9 0.1 0.019 14.7 0.0 2.6 2 1 0 2 2 2 2 ACT domain ACT_4 PF13291.6 gi|21226779|ref|NP_632701.1| - 2.7e-07 31.1 0.3 0.0039 17.8 0.0 2.2 2 0 0 2 2 2 2 ACT domain TxDE PF18711.1 gi|21226779|ref|NP_632701.1| - 0.075 13.2 0.7 7.6 6.7 0.2 2.8 3 0 0 3 3 3 0 Toxoflavin-degrading enzyme MtrB PF05440.12 gi|21226779|ref|NP_632701.1| - 0.11 12.9 0.1 0.2 12.1 0.1 1.4 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B DUF2103 PF09876.9 gi|21226780|ref|NP_632702.1| - 3.7e-37 126.2 0.9 4.5e-37 126.0 0.9 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2103) Semialdhyde_dh PF01118.24 gi|21226780|ref|NP_632702.1| - 0.028 14.9 0.1 0.036 14.5 0.1 1.3 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NYN PF01936.18 gi|21226782|ref|NP_632704.1| - 1.5e-23 83.9 0.0 2e-23 83.5 0.0 1.1 1 0 0 1 1 1 1 NYN domain DUF460 PF04312.13 gi|21226782|ref|NP_632704.1| - 0.11 12.2 0.0 3 7.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF460) Rhomboid PF01694.22 gi|21226784|ref|NP_632706.1| - 5.6e-34 117.3 13.3 1.1e-33 116.4 13.3 1.3 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 gi|21226784|ref|NP_632706.1| - 5e-05 23.8 0.6 5e-05 23.8 0.6 2.2 2 1 1 3 3 3 1 Eukaryotic integral membrane protein (DUF1751) Prismane PF03063.20 gi|21226786|ref|NP_632708.1| - 1.9e-108 363.4 4.4 2.3e-90 303.8 0.0 2.1 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_7 PF12838.7 gi|21226786|ref|NP_632708.1| - 1.9e-05 25.2 6.7 1.9e-05 25.2 6.7 2.5 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21226786|ref|NP_632708.1| - 3.4e-05 23.9 6.3 3.4e-05 23.9 6.3 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21226786|ref|NP_632708.1| - 0.00053 20.1 22.7 0.0011 19.0 13.1 3.5 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21226786|ref|NP_632708.1| - 0.0024 18.0 14.3 0.065 13.3 0.2 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21226786|ref|NP_632708.1| - 0.032 14.8 1.3 0.032 14.8 1.3 3.7 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21226786|ref|NP_632708.1| - 0.034 14.3 25.1 0.054 13.6 1.6 4.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21226786|ref|NP_632708.1| - 0.059 13.6 8.1 8.4 6.6 7.8 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain VRR_NUC PF08774.11 gi|21226786|ref|NP_632708.1| - 0.099 12.7 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 VRR-NUC domain Glyco_transf_28 PF03033.20 gi|21226786|ref|NP_632708.1| - 0.18 11.9 0.0 0.37 10.8 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain Fer4 PF00037.27 gi|21226786|ref|NP_632708.1| - 0.26 11.2 26.4 0.056 13.3 3.5 3.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21226786|ref|NP_632708.1| - 0.45 10.7 28.3 0.026 14.6 3.9 3.4 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21226786|ref|NP_632708.1| - 2.2 9.2 13.2 0.2 12.5 0.7 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain CO_dh PF02552.16 gi|21226787|ref|NP_632709.1| - 4.5e-31 107.9 0.0 5.3e-31 107.6 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.22 gi|21226787|ref|NP_632709.1| - 4.8e-08 32.8 0.0 7.6e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Mfa2 PF08842.10 gi|21226787|ref|NP_632709.1| - 0.11 12.1 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 CdhC PF03598.15 gi|21226788|ref|NP_632710.1| - 2.3e-61 206.2 0.0 3.6e-61 205.6 0.0 1.3 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit HP0268 PF18618.1 gi|21226788|ref|NP_632710.1| - 0.01 16.3 1.8 0.26 11.7 0.4 2.7 2 1 0 2 2 2 1 HP0268 CbiA PF01656.23 gi|21226789|ref|NP_632711.1| - 1.1e-17 64.2 0.0 1.9e-17 63.5 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|21226789|ref|NP_632711.1| - 1.9e-15 57.3 0.1 3.6e-15 56.3 0.1 1.4 1 1 0 1 1 1 1 AAA domain ParA PF10609.9 gi|21226789|ref|NP_632711.1| - 4.2e-11 42.8 0.8 0.00013 21.5 0.1 2.5 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|21226789|ref|NP_632711.1| - 1.2e-09 38.1 2.4 4.4e-09 36.2 2.4 1.8 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|21226789|ref|NP_632711.1| - 3.3e-07 30.0 0.1 0.0013 18.3 0.0 2.4 2 1 0 2 2 2 2 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|21226789|ref|NP_632711.1| - 1.3e-06 27.9 3.1 2.7e-05 23.5 3.0 2.3 1 1 1 2 2 2 1 Anion-transporting ATPase NTPase_1 PF03266.15 gi|21226789|ref|NP_632711.1| - 2.3e-05 24.4 0.6 0.18 11.7 0.2 2.2 2 0 0 2 2 2 2 NTPase MipZ PF09140.11 gi|21226789|ref|NP_632711.1| - 0.00019 20.8 0.2 0.02 14.2 0.0 2.4 2 1 0 2 2 2 1 ATPase MipZ AAA_16 PF13191.6 gi|21226789|ref|NP_632711.1| - 0.00041 20.8 0.1 0.00057 20.3 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_26 PF13500.6 gi|21226789|ref|NP_632711.1| - 0.00079 19.3 4.9 0.06 13.2 0.5 2.5 2 1 0 2 2 2 2 AAA domain Toprim PF01751.22 gi|21226789|ref|NP_632711.1| - 0.0013 18.9 0.1 0.027 14.7 0.0 2.3 2 0 0 2 2 2 1 Toprim domain AAA_24 PF13479.6 gi|21226789|ref|NP_632711.1| - 0.0016 18.2 0.1 0.0046 16.7 0.1 1.8 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.17 gi|21226789|ref|NP_632711.1| - 0.0037 17.4 3.7 0.0074 16.4 0.7 2.3 2 1 0 2 2 2 1 Helicase HerA, central domain AAA_30 PF13604.6 gi|21226789|ref|NP_632711.1| - 0.0038 17.0 0.3 0.0091 15.7 0.3 1.8 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 gi|21226789|ref|NP_632711.1| - 0.0074 16.0 0.2 0.08 12.7 0.0 2.1 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 gi|21226789|ref|NP_632711.1| - 0.0075 16.2 0.1 0.015 15.2 0.1 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase PEPcase_2 PF14010.6 gi|21226789|ref|NP_632711.1| - 0.014 13.9 0.7 0.019 13.5 0.7 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase AAA_22 PF13401.6 gi|21226789|ref|NP_632711.1| - 0.015 15.6 0.3 0.033 14.5 0.3 1.9 1 1 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|21226789|ref|NP_632711.1| - 0.016 15.2 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Toprim_2 PF13155.6 gi|21226789|ref|NP_632711.1| - 0.027 14.9 0.1 2.8 8.4 0.1 2.3 2 0 0 2 2 2 0 Toprim-like BLYB PF05289.11 gi|21226789|ref|NP_632711.1| - 0.037 14.3 0.5 0.51 10.6 0.0 2.6 3 0 0 3 3 3 0 Borrelia hemolysin accessory protein Zeta_toxin PF06414.12 gi|21226789|ref|NP_632711.1| - 0.04 13.2 0.1 0.071 12.4 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 gi|21226789|ref|NP_632711.1| - 0.041 14.4 0.3 0.053 14.0 0.3 1.6 1 1 0 1 1 1 0 ABC transporter Toprim_4 PF13662.6 gi|21226789|ref|NP_632711.1| - 0.047 14.2 0.1 0.31 11.5 0.0 2.1 2 0 0 2 2 2 0 Toprim domain AAA_18 PF13238.6 gi|21226789|ref|NP_632711.1| - 0.049 14.2 0.3 0.089 13.3 0.2 1.8 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|21226789|ref|NP_632711.1| - 0.051 12.5 0.5 0.081 11.8 0.5 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DUF2075 PF09848.9 gi|21226789|ref|NP_632711.1| - 0.053 12.7 0.0 0.08 12.2 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) SRP54 PF00448.22 gi|21226789|ref|NP_632711.1| - 0.059 13.0 3.2 0.48 10.0 0.9 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MobB PF03205.14 gi|21226789|ref|NP_632711.1| - 0.061 13.2 0.1 0.14 12.0 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B DUF853 PF05872.12 gi|21226789|ref|NP_632711.1| - 0.063 11.9 0.1 0.091 11.3 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) BORCS6 PF10157.9 gi|21226789|ref|NP_632711.1| - 0.067 13.4 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 ATPase PF06745.13 gi|21226789|ref|NP_632711.1| - 0.074 12.4 0.4 0.43 9.9 0.0 2.2 2 1 0 2 2 2 0 KaiC Helicase_RecD PF05127.14 gi|21226789|ref|NP_632711.1| - 0.075 12.9 0.0 0.15 11.9 0.0 1.6 2 0 0 2 2 1 0 Helicase HTH_19 PF12844.7 gi|21226789|ref|NP_632711.1| - 0.08 13.0 0.5 0.26 11.3 0.2 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain PIF1 PF05970.14 gi|21226789|ref|NP_632711.1| - 0.084 12.0 0.1 0.14 11.3 0.1 1.3 1 0 0 1 1 1 0 PIF1-like helicase RecA PF00154.21 gi|21226789|ref|NP_632711.1| - 0.087 12.3 0.2 2 7.8 0.1 2.2 2 0 0 2 2 2 0 recA bacterial DNA recombination protein AAA_19 PF13245.6 gi|21226789|ref|NP_632711.1| - 0.097 13.0 3.8 0.36 11.2 1.4 2.4 1 1 1 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|21226789|ref|NP_632711.1| - 0.11 11.9 0.1 0.26 10.8 0.1 1.6 2 0 0 2 2 1 0 P-loop containing dynein motor region NACHT PF05729.12 gi|21226789|ref|NP_632711.1| - 0.12 12.3 0.2 0.21 11.5 0.2 1.5 1 1 0 1 1 1 0 NACHT domain Sigma54_activat PF00158.26 gi|21226789|ref|NP_632711.1| - 0.12 12.1 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Pox_A32 PF04665.12 gi|21226789|ref|NP_632711.1| - 0.12 11.8 0.0 3.1 7.2 0.0 2.2 2 0 0 2 2 2 0 Poxvirus A32 protein TIP49 PF06068.13 gi|21226789|ref|NP_632711.1| - 0.12 11.5 0.3 0.12 11.5 0.3 1.8 2 1 0 2 2 2 0 TIP49 P-loop domain MeaB PF03308.16 gi|21226789|ref|NP_632711.1| - 0.14 11.1 1.6 0.51 9.3 0.1 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RNA_helicase PF00910.22 gi|21226789|ref|NP_632711.1| - 0.15 12.5 0.0 1.1 9.7 0.0 2.3 3 0 0 3 3 2 0 RNA helicase VirC1 PF07015.11 gi|21226789|ref|NP_632711.1| - 0.17 11.2 0.7 3.3 7.0 0.1 2.7 3 0 0 3 3 3 0 VirC1 protein AAA_25 PF13481.6 gi|21226789|ref|NP_632711.1| - 1 8.9 5.1 0.58 9.7 1.1 2.5 2 2 0 2 2 2 0 AAA domain CdhD PF03599.16 gi|21226790|ref|NP_632712.1| - 1.5e-92 310.3 2.1 6.1e-85 285.3 0.1 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit CdhD PF03599.16 gi|21226791|ref|NP_632713.1| - 1.6e-158 527.4 0.3 1.9e-158 527.2 0.3 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.13 gi|21226791|ref|NP_632713.1| - 6.6e-14 51.3 2.4 1.9e-13 49.8 2.4 1.8 1 0 0 1 1 1 1 Putative Fe-S cluster Pterin_bind PF00809.22 gi|21226791|ref|NP_632713.1| - 0.0043 16.8 0.0 0.1 12.3 0.0 2.2 1 1 0 1 1 1 1 Pterin binding enzyme MOFRL PF05161.13 gi|21226791|ref|NP_632713.1| - 0.12 12.6 0.2 0.23 11.7 0.2 1.4 1 0 0 1 1 1 0 MOFRL family NMD3 PF04981.13 gi|21226792|ref|NP_632714.1| - 3e-54 184.1 0.2 3.9e-54 183.7 0.2 1.1 1 0 0 1 1 1 1 NMD3 family zf-tcix PF14952.6 gi|21226792|ref|NP_632714.1| - 0.007 16.0 3.2 3.5 7.3 0.0 2.6 2 0 0 2 2 2 2 Putative treble-clef, zinc-finger, Zn-binding Prok-RING_1 PF14446.6 gi|21226792|ref|NP_632714.1| - 0.11 12.5 0.0 0.11 12.5 0.0 2.8 3 1 0 3 3 3 0 Prokaryotic RING finger family 1 CoatB PF10389.9 gi|21226792|ref|NP_632714.1| - 0.14 12.0 0.1 0.27 11.1 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage coat protein B zinc_ribbon_2 PF13240.6 gi|21226792|ref|NP_632714.1| - 0.57 10.0 7.1 10 6.0 4.2 2.7 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|21226792|ref|NP_632714.1| - 4.4 6.8 10.5 11 5.6 0.1 3.0 2 1 0 2 2 2 0 zinc-ribbon domain ATP-grasp_3 PF02655.14 gi|21226793|ref|NP_632715.1| - 1e-46 158.9 0.0 1.6e-46 158.3 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|21226793|ref|NP_632715.1| - 1.7e-13 50.6 0.0 1.1e-12 47.9 0.0 2.1 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.6 gi|21226793|ref|NP_632715.1| - 2.3e-10 40.3 0.0 9.7e-10 38.3 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon RimK PF08443.11 gi|21226793|ref|NP_632715.1| - 3.1e-08 33.4 0.0 1e-07 31.7 0.0 1.7 1 1 0 1 1 1 1 RimK-like ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|21226793|ref|NP_632715.1| - 4.3e-07 29.7 0.0 3.2e-06 26.8 0.0 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_4 PF13535.6 gi|21226793|ref|NP_632715.1| - 0.00013 21.6 0.0 0.00027 20.6 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|21226793|ref|NP_632715.1| - 0.00072 18.9 0.0 0.002 17.4 0.0 1.6 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp GARS_A PF01071.19 gi|21226793|ref|NP_632715.1| - 0.0013 18.6 0.1 0.43 10.3 0.0 2.4 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp PF02222.22 gi|21226793|ref|NP_632715.1| - 0.0028 17.3 0.0 0.01 15.4 0.0 1.8 1 1 0 1 1 1 1 ATP-grasp domain TFIIE_alpha PF02002.17 gi|21226794|ref|NP_632716.1| - 1.9e-16 59.8 0.5 3e-16 59.2 0.5 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit RepL PF05732.11 gi|21226794|ref|NP_632716.1| - 0.028 13.8 0.0 0.043 13.3 0.0 1.2 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) Mab-21 PF03281.14 gi|21226794|ref|NP_632716.1| - 0.033 13.5 0.1 0.043 13.1 0.1 1.2 1 0 0 1 1 1 0 Mab-21 protein TF_Zn_Ribbon PF08271.12 gi|21226794|ref|NP_632716.1| - 0.039 13.5 2.9 0.088 12.3 2.4 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding DUF1610 PF07754.11 gi|21226794|ref|NP_632716.1| - 0.079 12.9 0.3 0.079 12.9 0.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) HD PF01966.22 gi|21226795|ref|NP_632717.1| - 1.7e-15 57.3 1.7 2.6e-15 56.7 1.7 1.3 1 0 0 1 1 1 1 HD domain HD_2 PF12917.7 gi|21226795|ref|NP_632717.1| - 0.0004 20.2 0.4 0.00064 19.5 0.4 1.5 1 1 0 1 1 1 1 HD containing hydrolase-like enzyme DUF4033 PF13225.6 gi|21226795|ref|NP_632717.1| - 0.15 12.1 0.0 0.3 11.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) Proteasome PF00227.26 gi|21226796|ref|NP_632718.1| - 5.8e-56 189.0 1.3 6.6e-56 188.8 1.3 1.0 1 0 0 1 1 1 1 Proteasome subunit DUF4191 PF13829.6 gi|21226796|ref|NP_632718.1| - 0.093 12.1 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) KH_7 PF17214.3 gi|21226797|ref|NP_632719.1| - 1.1e-28 99.0 1.3 1.7e-27 95.1 0.1 2.9 2 0 0 2 2 2 1 KH domain Beta-Casp PF10996.8 gi|21226797|ref|NP_632719.1| - 3.2e-26 91.8 0.0 9.3e-26 90.3 0.0 1.8 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.27 gi|21226797|ref|NP_632719.1| - 5.1e-15 56.0 0.4 2.4e-13 50.5 0.4 3.0 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|21226797|ref|NP_632719.1| - 1.1e-14 54.0 0.0 2.8e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|21226797|ref|NP_632719.1| - 1.7e-13 50.5 0.0 2.8e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|21226797|ref|NP_632719.1| - 1.4e-10 41.0 0.1 3e-10 39.9 0.1 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|21226797|ref|NP_632719.1| - 1e-05 25.2 0.6 8.9e-05 22.2 0.2 2.8 3 0 0 3 3 3 1 KH domain Lactamase_B_3 PF13483.6 gi|21226797|ref|NP_632719.1| - 3.9e-05 23.6 0.0 0.00012 22.0 0.0 1.8 2 0 0 2 2 2 1 Beta-lactamase superfamily domain KH_1 PF00013.29 gi|21226797|ref|NP_632719.1| - 0.0068 16.2 2.2 0.071 12.9 0.4 2.7 2 0 0 2 2 2 1 KH domain KH_4 PF13083.6 gi|21226797|ref|NP_632719.1| - 0.013 15.3 0.0 0.033 14.0 0.0 1.7 1 0 0 1 1 1 0 KH domain DUF3489 PF11994.8 gi|21226797|ref|NP_632719.1| - 0.12 12.5 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) HAD_2 PF13419.6 gi|21226798|ref|NP_632720.1| - 3.9e-30 105.2 0.0 4.7e-30 105.0 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|21226798|ref|NP_632720.1| - 2.9e-15 57.1 0.0 1.8e-14 54.6 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|21226798|ref|NP_632720.1| - 0.0014 19.0 0.0 0.0019 18.6 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|21226798|ref|NP_632720.1| - 0.048 13.7 0.0 0.097 12.7 0.0 1.4 1 0 0 1 1 1 0 HAD-hyrolase-like Tubulin PF00091.25 gi|21226799|ref|NP_632721.1| - 1e-37 130.3 0.1 1.8e-37 129.5 0.1 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|21226799|ref|NP_632721.1| - 3.9e-34 116.8 2.4 7.8e-34 115.9 0.2 2.6 3 1 0 3 3 3 1 FtsZ family, C-terminal domain Tubulin_2 PF13809.6 gi|21226799|ref|NP_632721.1| - 2.1 7.5 6.8 3.8 6.6 2.5 2.3 1 1 0 2 2 2 0 Tubulin like DUF4346 PF14251.6 gi|21226800|ref|NP_632722.1| - 8e-10 38.8 0.0 2.1e-09 37.5 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) Pterin_bind PF00809.22 gi|21226800|ref|NP_632722.1| - 2.6e-09 37.1 0.9 2.1e-08 34.2 0.9 2.6 1 1 0 1 1 1 1 Pterin binding enzyme CdhD PF03599.16 gi|21226800|ref|NP_632722.1| - 3e-05 22.9 0.0 0.00013 20.8 0.0 1.8 2 0 0 2 2 2 1 CO dehydrogenase/acetyl-CoA synthase delta subunit DUF561 PF04481.12 gi|21226800|ref|NP_632722.1| - 0.047 12.8 0.1 0.077 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) PBECR5 PF18814.1 gi|21226801|ref|NP_632723.1| - 0.081 12.9 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5 H_PPase PF03030.16 gi|21226802|ref|NP_632724.1| - 2.9e-270 898.5 56.5 3.3e-270 898.3 56.5 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase DUF1980 PF09323.10 gi|21226802|ref|NP_632724.1| - 0.033 14.1 1.4 3.7 7.4 0.2 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1980) UPF0139 PF03669.13 gi|21226802|ref|NP_632724.1| - 0.084 12.8 0.1 0.7 9.8 0.0 2.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) H_PPase PF03030.16 gi|21226803|ref|NP_632725.1| - 1.8e-264 879.3 46.0 2.1e-264 879.1 46.0 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase TMEM208_SND2 PF05620.11 gi|21226803|ref|NP_632725.1| - 0.27 11.0 3.2 4 7.2 0.5 3.1 3 0 0 3 3 3 0 SRP-independent targeting protein 2/TMEM208 MFS_1 PF07690.16 gi|21226804|ref|NP_632726.1| - 3.4e-35 121.6 43.7 2.3e-28 99.1 28.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|21226804|ref|NP_632726.1| - 1.2e-06 27.6 5.7 1.2e-06 27.6 5.7 3.6 2 2 1 3 3 3 2 Sugar (and other) transporter MFS_3 PF05977.13 gi|21226804|ref|NP_632726.1| - 0.0006 18.3 0.7 0.0006 18.3 0.7 2.1 2 0 0 2 2 2 1 Transmembrane secretion effector MFS_1 PF07690.16 gi|21226805|ref|NP_632727.1| - 6.1e-34 117.5 40.3 1.5e-25 89.9 9.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|21226805|ref|NP_632727.1| - 5.4e-08 32.5 0.8 5.4e-08 32.5 0.8 2.6 2 1 1 3 3 3 1 Uncharacterised MFS-type transporter YbfB PUA PF01472.20 gi|21226806|ref|NP_632728.1| - 4.1e-20 71.5 0.9 6.3e-20 70.9 0.9 1.3 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|21226806|ref|NP_632728.1| - 0.00022 21.4 0.0 0.00036 20.7 0.0 1.3 1 0 0 1 1 1 1 UPF0113 PUA domain Pre-PUA PF17832.1 gi|21226806|ref|NP_632728.1| - 0.00062 20.4 0.2 0.0017 19.0 0.2 1.7 1 1 0 1 1 1 1 Pre-PUA-like domain KH_2 PF07650.17 gi|21226806|ref|NP_632728.1| - 0.0022 17.8 1.1 1.9 8.4 0.1 2.6 3 0 0 3 3 3 2 KH domain DUF1947 PF09183.10 gi|21226806|ref|NP_632728.1| - 0.0027 18.0 0.1 0.0062 16.8 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) SepF PF04472.12 gi|21226807|ref|NP_632729.1| - 3.9e-13 49.5 1.7 5.9e-13 48.9 1.7 1.3 1 0 0 1 1 1 1 Cell division protein SepF Transposase_31 PF04754.12 gi|21226807|ref|NP_632729.1| - 0.018 14.7 0.1 0.026 14.1 0.1 1.3 1 1 0 1 1 1 0 Putative transposase, YhgA-like zf-ZPR1 PF03367.13 gi|21226808|ref|NP_632730.1| - 5.2e-37 127.1 0.0 6.7e-37 126.8 0.0 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Prok-RING_4 PF14447.6 gi|21226808|ref|NP_632730.1| - 0.0042 16.9 0.4 0.0088 15.9 0.4 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Nse4-Nse3_bdg PF15412.6 gi|21226808|ref|NP_632730.1| - 0.034 14.2 0.1 0.073 13.2 0.1 1.6 1 0 0 1 1 1 0 Binding domain of Nse4/EID3 to Nse3-MAGE tRNA-synt_2b PF00587.25 gi|21226809|ref|NP_632731.1| - 1.3e-27 96.9 0.0 2e-27 96.3 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|21226809|ref|NP_632731.1| - 9e-21 73.8 0.9 1.4e-20 73.3 0.2 1.7 2 0 0 2 2 2 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|21226809|ref|NP_632731.1| - 3.7e-16 59.1 0.6 1.4e-15 57.3 0.1 2.1 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal TIR_2 PF13676.6 gi|21226809|ref|NP_632731.1| - 0.066 13.8 0.0 0.27 11.8 0.0 2.1 1 0 0 1 1 1 0 TIR domain DUF4145 PF13643.6 gi|21226809|ref|NP_632731.1| - 0.15 12.2 0.0 0.34 11.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) DBI_PRT PF02277.17 gi|21226810|ref|NP_632732.1| - 0.00095 18.5 1.7 0.0014 17.9 1.7 1.2 1 0 0 1 1 1 1 Phosphoribosyltransferase DZR PF12773.7 gi|21226811|ref|NP_632733.1| - 0.00057 19.9 1.3 0.00086 19.3 1.3 1.3 1 0 0 1 1 1 1 Double zinc ribbon C1_1 PF00130.22 gi|21226811|ref|NP_632733.1| - 0.0017 18.2 2.0 0.0021 17.9 2.0 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) RNA_POL_M_15KD PF02150.16 gi|21226811|ref|NP_632733.1| - 0.0078 16.1 1.9 0.018 14.9 1.9 1.5 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit zinc-ribbons_6 PF07191.12 gi|21226811|ref|NP_632733.1| - 0.011 15.7 2.7 0.015 15.3 2.7 1.2 1 0 0 1 1 1 0 zinc-ribbons FYVE PF01363.21 gi|21226811|ref|NP_632733.1| - 0.02 15.0 4.8 0.032 14.4 4.8 1.4 1 1 0 1 1 1 0 FYVE zinc finger Zf_RING PF16744.5 gi|21226811|ref|NP_632733.1| - 0.025 14.7 1.2 0.035 14.2 1.2 1.3 1 1 0 1 1 1 0 KIAA1045 RING finger Nudix_N_2 PF14803.6 gi|21226811|ref|NP_632733.1| - 0.027 14.4 4.3 0.19 11.7 4.3 2.1 1 1 0 1 1 1 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|21226811|ref|NP_632733.1| - 0.041 13.6 1.9 3.9 7.3 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21226811|ref|NP_632733.1| - 0.074 13.2 3.2 6.3 7.0 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-RRN7 PF11781.8 gi|21226811|ref|NP_632733.1| - 0.092 12.5 4.0 0.35 10.6 1.2 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DDE_Tnp_1 PF01609.21 gi|21226813|ref|NP_632735.1| - 3.3e-10 40.0 2.4 7.1e-10 38.9 2.4 1.5 1 1 0 1 1 1 1 Transposase DDE domain Tn7_Tnp_TnsA_N PF08722.11 gi|21226813|ref|NP_632735.1| - 0.46 10.7 3.3 16 5.8 0.0 2.8 2 1 0 2 2 2 0 TnsA endonuclease N terminal DUF1670 PF07900.11 gi|21226814|ref|NP_632736.1| - 2.4e-57 193.8 0.2 3e-57 193.5 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) HTH_29 PF13551.6 gi|21226814|ref|NP_632736.1| - 3.7e-05 23.7 0.0 1.6 8.8 0.0 3.2 1 1 2 3 3 3 2 Winged helix-turn helix HTH_DeoR PF08220.12 gi|21226814|ref|NP_632736.1| - 0.0014 18.3 0.1 0.0032 17.2 0.1 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_23 PF13384.6 gi|21226814|ref|NP_632736.1| - 0.0018 18.0 0.9 0.34 10.8 0.1 2.7 2 1 1 3 3 3 2 Homeodomain-like domain AbiEi_4 PF13338.6 gi|21226814|ref|NP_632736.1| - 0.037 14.2 0.0 0.081 13.1 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin HTH_Crp_2 PF13545.6 gi|21226814|ref|NP_632736.1| - 0.081 12.9 1.0 0.27 11.2 0.1 2.1 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|21226814|ref|NP_632736.1| - 0.13 12.2 2.0 0.22 11.5 0.2 2.1 2 0 0 2 2 2 0 HTH domain DUF1670 PF07900.11 gi|21226815|ref|NP_632737.1| - 5.5e-50 169.8 0.4 6.5e-50 169.5 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) DeoC PF01791.9 gi|21226816|ref|NP_632738.1| - 3.1e-60 203.7 0.0 3.8e-60 203.4 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PK PF00224.21 gi|21226817|ref|NP_632739.1| - 1e-123 412.7 1.4 1.4e-123 412.3 1.4 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|21226817|ref|NP_632739.1| - 1.8e-24 86.2 0.0 6.7e-24 84.4 0.0 2.0 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 gi|21226817|ref|NP_632739.1| - 3.5e-05 23.1 1.0 8.4e-05 21.8 0.8 1.7 1 1 1 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family TPR_1 PF00515.28 gi|21226819|ref|NP_632741.1| - 5.2e-13 48.2 0.2 3.8e-09 36.0 0.0 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21226819|ref|NP_632741.1| - 1.9e-09 37.0 0.8 1.9e-06 27.4 0.3 2.3 1 1 1 2 2 2 2 TPR repeat TPR_8 PF13181.6 gi|21226819|ref|NP_632741.1| - 9.1e-09 34.9 1.4 4.4e-06 26.5 0.0 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21226819|ref|NP_632741.1| - 1e-08 34.7 3.6 6.7e-07 28.9 0.0 3.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21226819|ref|NP_632741.1| - 3.9e-05 24.1 0.1 0.12 13.2 0.0 2.7 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21226819|ref|NP_632741.1| - 0.00014 21.9 0.0 0.00018 21.6 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21226819|ref|NP_632741.1| - 0.00022 21.8 0.0 0.00051 20.6 0.0 1.6 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21226819|ref|NP_632741.1| - 0.0021 18.5 0.4 0.1 13.1 0.2 2.4 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21226819|ref|NP_632741.1| - 0.005 17.1 1.2 0.59 10.6 0.0 2.7 3 0 0 3 3 2 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|21226819|ref|NP_632741.1| - 0.0065 15.9 0.0 0.011 15.1 0.0 1.4 1 0 0 1 1 1 1 SHNi-TPR TPR_12 PF13424.6 gi|21226819|ref|NP_632741.1| - 0.0075 16.5 0.0 0.02 15.2 0.0 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21226819|ref|NP_632741.1| - 0.033 14.8 0.1 2.6 8.9 0.0 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21226819|ref|NP_632741.1| - 0.13 12.3 0.2 4.2 7.6 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat DAO PF01266.24 gi|21226820|ref|NP_632742.1| - 5.9e-15 55.7 2.8 1.5e-06 28.1 0.3 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|21226820|ref|NP_632742.1| - 2.1e-12 47.0 3.3 1.9e-06 27.4 0.0 2.5 3 0 0 3 3 3 2 FAD binding domain FAD_oxidored PF12831.7 gi|21226820|ref|NP_632742.1| - 1e-10 41.5 0.2 2.4e-10 40.4 0.2 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|21226820|ref|NP_632742.1| - 6e-09 35.1 1.4 3.2e-08 32.7 0.2 2.0 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|21226820|ref|NP_632742.1| - 2e-07 30.6 1.8 2.5e-06 26.9 0.2 2.3 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|21226820|ref|NP_632742.1| - 2e-07 30.5 2.9 9e-07 28.3 2.9 1.9 1 1 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|21226820|ref|NP_632742.1| - 2e-07 30.5 1.0 3.7e-07 29.6 0.2 1.8 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 gi|21226820|ref|NP_632742.1| - 3e-07 29.8 1.4 0.0043 16.1 0.1 2.3 2 1 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|21226820|ref|NP_632742.1| - 5.3e-07 29.8 0.3 1.6e-06 28.2 0.1 1.9 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|21226820|ref|NP_632742.1| - 2e-05 24.0 0.0 6.3e-05 22.3 0.0 1.8 2 0 0 2 2 2 1 Thi4 family Pyr_redox_3 PF13738.6 gi|21226820|ref|NP_632742.1| - 2.1e-05 23.9 0.7 0.0046 16.3 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|21226820|ref|NP_632742.1| - 0.00035 19.5 0.8 0.048 12.5 0.3 2.3 1 1 1 2 2 2 2 Tryptophan halogenase Pyr_redox PF00070.27 gi|21226820|ref|NP_632742.1| - 0.0013 19.2 0.7 0.26 11.9 0.0 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|21226820|ref|NP_632742.1| - 0.0031 16.8 0.2 0.014 14.7 0.1 2.1 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_9 PF13454.6 gi|21226820|ref|NP_632742.1| - 0.012 15.6 0.1 1.5 8.8 0.0 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding 3HCDH_N PF02737.18 gi|21226820|ref|NP_632742.1| - 0.014 15.3 0.0 0.12 12.2 0.1 2.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Fer4_NifH PF00142.18 gi|21226821|ref|NP_632743.1| - 1.6e-126 421.3 1.3 1.8e-126 421.1 1.3 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|21226821|ref|NP_632743.1| - 1.3e-13 51.1 0.0 7e-13 48.8 0.0 2.0 1 1 1 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|21226821|ref|NP_632743.1| - 7.4e-11 42.3 1.0 7.3e-10 39.0 0.3 2.3 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|21226821|ref|NP_632743.1| - 5.9e-08 32.5 0.4 2.3e-06 27.2 0.3 2.2 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|21226821|ref|NP_632743.1| - 3.3e-06 26.5 0.3 6.2e-06 25.6 0.3 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase MeaB PF03308.16 gi|21226821|ref|NP_632743.1| - 0.00063 18.8 0.3 0.00086 18.4 0.3 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CBP_BcsQ PF06564.12 gi|21226821|ref|NP_632743.1| - 0.0022 17.5 0.2 0.14 11.6 0.2 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ AAA_24 PF13479.6 gi|21226821|ref|NP_632743.1| - 0.0033 17.2 0.1 0.0061 16.3 0.1 1.4 1 0 0 1 1 1 1 AAA domain MipZ PF09140.11 gi|21226821|ref|NP_632743.1| - 0.0054 16.1 0.3 0.035 13.4 0.1 2.0 2 0 0 2 2 2 1 ATPase MipZ SRP54 PF00448.22 gi|21226821|ref|NP_632743.1| - 0.0086 15.7 0.4 0.017 14.8 0.4 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain RNA_helicase PF00910.22 gi|21226821|ref|NP_632743.1| - 0.012 16.0 0.2 0.038 14.4 0.1 1.9 2 0 0 2 2 2 0 RNA helicase DUF87 PF01935.17 gi|21226821|ref|NP_632743.1| - 0.055 13.6 0.3 0.11 12.6 0.1 1.5 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_10 PF12846.7 gi|21226821|ref|NP_632743.1| - 0.068 12.1 0.1 0.1 11.5 0.1 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_22 PF13401.6 gi|21226821|ref|NP_632743.1| - 0.076 13.3 0.1 0.22 11.8 0.1 1.7 2 0 0 2 2 2 0 AAA domain CLP1_P PF16575.5 gi|21226821|ref|NP_632743.1| - 0.14 11.9 0.1 0.3 10.8 0.1 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop ABC_tran PF00005.27 gi|21226821|ref|NP_632743.1| - 0.17 12.4 0.5 0.28 11.7 0.2 1.5 2 0 0 2 2 1 0 ABC transporter AAA_25 PF13481.6 gi|21226821|ref|NP_632743.1| - 0.18 11.3 0.1 0.31 10.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain P-II PF00543.22 gi|21226822|ref|NP_632744.1| - 1.5e-30 105.8 0.8 1.7e-30 105.7 0.8 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II MEKHLA PF08670.11 gi|21226822|ref|NP_632744.1| - 0.049 13.5 0.0 0.064 13.2 0.0 1.1 1 0 0 1 1 1 0 MEKHLA domain P-II PF00543.22 gi|21226823|ref|NP_632745.1| - 2.8e-32 111.3 0.0 4e-32 110.8 0.0 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Oxidored_nitro PF00148.19 gi|21226824|ref|NP_632746.1| - 3.8e-137 457.3 0.2 5.4e-137 456.8 0.2 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Thioredoxin_6 PF13848.6 gi|21226824|ref|NP_632746.1| - 0.048 13.6 0.1 0.12 12.2 0.1 1.7 1 0 0 1 1 1 0 Thioredoxin-like domain Oxidored_nitro PF00148.19 gi|21226825|ref|NP_632747.1| - 1.8e-126 422.1 0.0 2.1e-126 421.9 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 gi|21226826|ref|NP_632748.1| - 7.3e-115 383.9 0.2 8.4e-115 383.7 0.2 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 gi|21226827|ref|NP_632749.1| - 9.1e-141 469.2 0.0 1.1e-140 468.9 0.0 1.1 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase SBP_bac_11 PF13531.6 gi|21226828|ref|NP_632750.1| - 6.4e-52 176.6 0.0 7.4e-52 176.4 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|21226828|ref|NP_632750.1| - 2.7e-17 63.7 0.1 8.6e-16 58.8 0.1 2.1 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like_2 PF12849.7 gi|21226828|ref|NP_632750.1| - 3.9e-07 30.0 0.1 5.5e-07 29.5 0.1 1.3 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_6 PF13343.6 gi|21226828|ref|NP_632750.1| - 6.8e-06 25.7 0.0 1.4e-05 24.6 0.0 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|21226828|ref|NP_632750.1| - 1.9e-05 24.6 0.0 0.013 15.3 0.0 2.2 1 1 0 2 2 2 2 Bacterial extracellular solute-binding protein LysR_substrate PF03466.20 gi|21226828|ref|NP_632750.1| - 0.0016 17.8 0.0 0.0078 15.6 0.0 2.1 2 1 0 2 2 2 1 LysR substrate binding domain BPD_transp_1 PF00528.22 gi|21226829|ref|NP_632751.1| - 2.1e-20 73.3 12.6 2.7e-20 72.9 12.6 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|21226830|ref|NP_632752.1| - 5.9e-28 98.1 0.0 1e-27 97.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21226830|ref|NP_632752.1| - 4.5e-10 39.8 0.2 1.7e-05 24.8 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 gi|21226830|ref|NP_632752.1| - 2.6e-06 27.5 0.0 6.2e-06 26.3 0.0 1.7 2 0 0 2 2 2 1 TOBE domain SMC_N PF02463.19 gi|21226830|ref|NP_632752.1| - 0.0015 18.0 0.1 0.39 10.1 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|21226830|ref|NP_632752.1| - 0.004 17.7 0.0 0.0064 17.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|21226830|ref|NP_632752.1| - 0.0045 17.3 0.1 0.019 15.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain PEPCK_ATP PF01293.20 gi|21226830|ref|NP_632752.1| - 0.033 12.9 0.4 0.053 12.2 0.4 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase OB_MalK PF17912.1 gi|21226830|ref|NP_632752.1| - 0.085 13.7 0.0 0.54 11.1 0.0 2.5 2 0 0 2 2 2 0 MalK OB fold domain AAA_18 PF13238.6 gi|21226830|ref|NP_632752.1| - 0.089 13.3 0.3 2.9 8.4 0.4 2.5 2 1 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|21226830|ref|NP_632752.1| - 0.1 12.8 0.4 0.97 9.7 0.4 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|21226830|ref|NP_632752.1| - 0.14 11.9 0.1 0.28 11.0 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain sCache_2 PF17200.4 gi|21226831|ref|NP_632753.1| - 1.5e-52 177.6 6.9 7.1e-23 81.2 0.1 3.5 3 0 0 3 3 3 3 Single Cache domain 2 SBP_bac_3 PF00497.20 gi|21226831|ref|NP_632753.1| - 4.5e-47 160.4 1.9 3.6e-25 88.7 0.5 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 dCache_2 PF08269.11 gi|21226831|ref|NP_632753.1| - 1.3e-44 152.6 7.0 8.9e-18 64.5 0.1 4.0 3 1 1 4 4 4 3 Cache domain sCache_3_2 PF17203.4 gi|21226831|ref|NP_632753.1| - 0.0013 18.9 0.0 2.4 8.3 0.0 3.6 3 0 0 3 3 3 1 Single cache domain 3 Cache_3-Cache_2 PF17201.4 gi|21226831|ref|NP_632753.1| - 0.0014 18.0 0.3 0.2 10.9 0.0 3.0 3 0 0 3 3 3 1 Cache 3/Cache 2 fusion domain DctP PF03480.13 gi|21226831|ref|NP_632753.1| - 0.005 16.2 0.1 0.52 9.6 0.0 2.8 3 0 0 3 3 3 1 Bacterial extracellular solute-binding protein, family 7 Methyltransf_11 PF08241.12 gi|21226832|ref|NP_632754.1| - 2.9e-23 82.3 0.0 5.9e-23 81.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21226832|ref|NP_632754.1| - 9e-23 80.8 0.0 2e-22 79.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21226832|ref|NP_632754.1| - 2.2e-22 79.5 0.0 3.1e-22 79.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21226832|ref|NP_632754.1| - 1.9e-17 63.4 0.0 6.5e-17 61.6 0.0 1.8 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|21226832|ref|NP_632754.1| - 3.9e-16 59.6 0.0 6.1e-16 59.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21226832|ref|NP_632754.1| - 1.2e-12 48.0 0.0 6.5e-12 45.6 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|21226832|ref|NP_632754.1| - 6.4e-10 38.8 0.0 3.7e-09 36.3 0.0 1.9 2 0 0 2 2 2 1 Putative methyltransferase MTS PF05175.14 gi|21226832|ref|NP_632754.1| - 1.7e-08 34.2 0.0 3.1e-08 33.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.18 gi|21226832|ref|NP_632754.1| - 2.7e-06 26.8 0.1 5.2e-05 22.6 0.0 2.2 1 1 1 2 2 2 1 O-methyltransferase domain Methyltransf_18 PF12847.7 gi|21226832|ref|NP_632754.1| - 6.1e-06 26.2 0.0 1.1e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|21226832|ref|NP_632754.1| - 1.4e-05 25.1 0.0 1.8e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21226832|ref|NP_632754.1| - 1.4e-05 24.5 0.0 2e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_8 PF05148.15 gi|21226832|ref|NP_632754.1| - 7.9e-05 22.6 0.0 0.00053 19.9 0.0 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_9 PF08003.11 gi|21226832|ref|NP_632754.1| - 0.00025 20.1 0.0 0.00033 19.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) PrmA PF06325.13 gi|21226832|ref|NP_632754.1| - 0.00069 19.1 0.0 0.00096 18.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_29 PF03141.16 gi|21226832|ref|NP_632754.1| - 0.0007 18.3 0.0 0.00091 17.9 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase PCMT PF01135.19 gi|21226832|ref|NP_632754.1| - 0.0011 18.8 0.0 0.0017 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 gi|21226832|ref|NP_632754.1| - 0.024 14.3 0.1 0.12 12.0 0.1 2.0 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 DUF938 PF06080.12 gi|21226832|ref|NP_632754.1| - 0.1 12.3 0.0 0.28 10.9 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_15 PF09445.10 gi|21226832|ref|NP_632754.1| - 0.16 11.5 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase MetW PF07021.12 gi|21226832|ref|NP_632754.1| - 0.17 11.4 0.0 0.25 10.9 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW P-II PF00543.22 gi|21226834|ref|NP_632756.1| - 1.3e-31 109.3 0.1 1.4e-31 109.1 0.1 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Ammonium_transp PF00909.21 gi|21226835|ref|NP_632757.1| - 2.3e-118 395.4 39.9 2.6e-118 395.2 39.9 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family CD99L2 PF12301.8 gi|21226835|ref|NP_632757.1| - 0.045 14.0 0.4 0.09 13.1 0.4 1.4 1 0 0 1 1 1 0 CD99 antigen like protein 2 Wyosine_form PF08608.12 gi|21226836|ref|NP_632758.1| - 0.026 14.9 0.0 0.042 14.2 0.0 1.3 1 0 0 1 1 1 0 Wyosine base formation SipA_VBS PF17985.1 gi|21226836|ref|NP_632758.1| - 0.12 12.3 0.0 0.35 10.9 0.0 1.8 1 0 0 1 1 1 0 SipA vinculin binding site UPF0060 PF02694.15 gi|21226837|ref|NP_632759.1| - 1.4e-12 47.7 0.8 1.7e-12 47.5 0.8 1.2 1 0 0 1 1 1 1 Uncharacterised BCR, YnfA/UPF0060 family ArsP_1 PF03773.13 gi|21226838|ref|NP_632760.1| - 3e-84 282.7 27.4 3.6e-84 282.4 27.4 1.0 1 0 0 1 1 1 1 Predicted permease UPF0542 PF15086.6 gi|21226838|ref|NP_632760.1| - 0.47 10.4 6.8 37 4.4 0.3 3.6 3 0 0 3 3 3 0 Uncharacterised protein family UPF0542 Thioredoxin_3 PF13192.6 gi|21226839|ref|NP_632761.1| - 6e-30 103.1 1.4 6.6e-30 103.0 1.4 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|21226839|ref|NP_632761.1| - 6.6e-05 23.0 0.3 0.00013 22.1 0.3 1.5 1 1 0 1 1 1 1 Glutaredoxin Thioredoxin_4 PF13462.6 gi|21226839|ref|NP_632761.1| - 0.017 15.3 1.0 0.13 12.4 0.1 1.9 1 1 1 2 2 2 0 Thioredoxin DUF1611 PF07755.11 gi|21226839|ref|NP_632761.1| - 0.028 13.7 0.2 0.029 13.6 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain Thioredoxin PF00085.20 gi|21226839|ref|NP_632761.1| - 0.069 13.1 0.2 0.073 13.1 0.2 1.2 1 0 0 1 1 1 0 Thioredoxin ArsD PF06953.11 gi|21226839|ref|NP_632761.1| - 0.081 13.3 0.0 0.14 12.5 0.0 1.4 1 1 0 1 1 1 0 Arsenical resistance operon trans-acting repressor ArsD DGC PF08859.11 gi|21226840|ref|NP_632762.1| - 2.5e-35 120.8 0.5 3e-35 120.5 0.5 1.1 1 0 0 1 1 1 1 DGC domain SAM_LFY PF01698.16 gi|21226840|ref|NP_632762.1| - 0.041 13.8 0.0 3.3 7.7 0.0 2.1 2 0 0 2 2 2 0 Floricaula / Leafy protein SAM domain DDE_Tnp_IS66 PF03050.14 gi|21226841|ref|NP_632763.1| - 2.5e-73 247.0 0.0 2.9e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21226841|ref|NP_632763.1| - 4.8e-10 39.7 6.7 1.3e-09 38.2 6.7 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21226841|ref|NP_632763.1| - 0.00015 22.0 1.1 0.62 10.3 0.0 3.0 2 1 1 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|21226841|ref|NP_632763.1| - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) zf-RING_5 PF14634.6 gi|21226841|ref|NP_632763.1| - 0.34 10.9 7.9 1 9.4 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21226841|ref|NP_632763.1| - 1.2 10.0 7.5 0.17 12.6 2.9 2.0 2 0 0 2 2 2 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|21226841|ref|NP_632763.1| - 1.3 9.7 5.2 31 5.3 0.5 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DASH_Spc19 PF08287.11 gi|21226842|ref|NP_632764.1| - 0.025 14.5 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Spc19 SlyX PF04102.12 gi|21226842|ref|NP_632764.1| - 0.036 14.7 0.1 0.054 14.1 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.11 gi|21226842|ref|NP_632764.1| - 0.22 11.3 0.4 0.22 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) Usp PF00582.26 gi|21226843|ref|NP_632765.1| - 7.7e-40 136.7 0.2 1.7e-20 74.0 0.0 2.3 2 0 0 2 2 2 2 Universal stress protein family SBF PF01758.16 gi|21226844|ref|NP_632766.1| - 6.2e-46 156.5 23.4 6.2e-46 156.5 23.4 2.4 2 1 0 2 2 2 1 Sodium Bile acid symporter family DUF4179 PF13786.6 gi|21226844|ref|NP_632766.1| - 1 9.9 5.0 11 6.6 0.6 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4179) CMD PF02627.20 gi|21226845|ref|NP_632767.1| - 8.5e-24 83.4 0.1 1.1e-23 83.1 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Methyltransf_25 PF13649.6 gi|21226847|ref|NP_632769.1| - 9.5e-16 58.3 0.0 2.1e-15 57.2 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21226847|ref|NP_632769.1| - 3e-15 56.6 0.0 6.2e-15 55.6 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21226847|ref|NP_632769.1| - 2.8e-14 53.6 0.0 5.3e-14 52.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21226847|ref|NP_632769.1| - 2.4e-12 46.7 0.1 8.2e-12 45.0 0.0 1.7 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.6 gi|21226847|ref|NP_632769.1| - 1.7e-11 44.2 0.0 2.4e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21226847|ref|NP_632769.1| - 4.1e-11 43.0 0.0 5.3e-11 42.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21226847|ref|NP_632769.1| - 3e-10 39.9 0.0 4.3e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TehB PF03848.14 gi|21226847|ref|NP_632769.1| - 1.2e-05 24.8 0.0 1.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|21226847|ref|NP_632769.1| - 2.1e-05 24.1 0.0 3.8e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|21226847|ref|NP_632769.1| - 0.0018 17.9 0.0 0.0025 17.5 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) PCMT PF01135.19 gi|21226847|ref|NP_632769.1| - 0.0019 18.0 0.0 0.0026 17.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_PK PF05891.12 gi|21226847|ref|NP_632769.1| - 0.0049 16.4 0.0 0.0072 15.9 0.0 1.1 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Pox_MCEL PF03291.16 gi|21226847|ref|NP_632769.1| - 0.0055 15.9 0.0 0.024 13.8 0.0 1.9 1 1 0 1 1 1 1 mRNA capping enzyme Methyltransf_2 PF00891.18 gi|21226847|ref|NP_632769.1| - 0.013 14.8 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 O-methyltransferase domain PrmA PF06325.13 gi|21226847|ref|NP_632769.1| - 0.014 14.8 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 gi|21226847|ref|NP_632769.1| - 0.015 14.8 0.0 0.058 12.9 0.0 1.8 1 1 1 2 2 2 0 Putative methyltransferase TPMT PF05724.11 gi|21226847|ref|NP_632769.1| - 0.067 12.8 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DEAD PF00270.29 gi|21226849|ref|NP_632771.1| - 2.3e-49 167.5 0.2 7e-49 166.0 0.0 1.9 2 1 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|21226849|ref|NP_632771.1| - 2.3e-31 108.4 1.6 9.9e-30 103.1 0.1 3.4 4 0 0 4 4 4 1 Helicase conserved C-terminal domain DbpA PF03880.15 gi|21226849|ref|NP_632771.1| - 3e-11 43.2 0.1 2.5e-10 40.2 0.0 2.6 2 0 0 2 2 2 1 DbpA RNA binding domain ResIII PF04851.15 gi|21226849|ref|NP_632771.1| - 2.2e-09 37.5 0.0 6.1e-09 36.1 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 gi|21226849|ref|NP_632771.1| - 0.0012 18.2 0.1 0.0039 16.6 0.1 1.9 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit ERCC3_RAD25_C PF16203.5 gi|21226849|ref|NP_632771.1| - 0.0019 17.5 0.0 0.0032 16.7 0.0 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_30 PF13604.6 gi|21226849|ref|NP_632771.1| - 0.0079 15.9 0.0 0.019 14.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain Methyltransf_12 PF08242.12 gi|21226850|ref|NP_632772.1| - 1.3e-17 64.4 0.0 2e-17 63.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21226850|ref|NP_632772.1| - 9.3e-14 51.9 0.0 1.6e-13 51.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21226850|ref|NP_632772.1| - 1.1e-10 42.0 0.0 1.7e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21226850|ref|NP_632772.1| - 2.4e-08 33.9 0.0 2.9e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21226850|ref|NP_632772.1| - 1.8e-07 31.1 0.0 2.4e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21226850|ref|NP_632772.1| - 3.6e-07 29.8 0.0 5.3e-07 29.2 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family ResIII PF04851.15 gi|21226850|ref|NP_632772.1| - 0.0061 16.6 0.0 0.007 16.4 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Methyltransf_5 PF01795.19 gi|21226850|ref|NP_632772.1| - 0.023 14.2 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family Methyltransf_2 PF00891.18 gi|21226850|ref|NP_632772.1| - 0.028 13.7 0.0 0.035 13.4 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain CMAS PF02353.20 gi|21226850|ref|NP_632772.1| - 0.09 12.0 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase ADH_N PF08240.12 gi|21226851|ref|NP_632773.1| - 3.9e-27 94.3 0.2 6.1e-27 93.6 0.2 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.6 gi|21226851|ref|NP_632773.1| - 4.7e-12 45.6 0.4 2.8e-11 43.1 0.9 2.1 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-associated ADH_zinc_N PF00107.26 gi|21226851|ref|NP_632773.1| - 2.8e-05 24.1 0.0 0.0013 18.7 0.0 3.0 2 1 1 3 3 3 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|21226851|ref|NP_632773.1| - 0.009 15.3 0.0 0.015 14.6 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Glu_dehyd_C PF16912.5 gi|21226851|ref|NP_632773.1| - 0.056 12.9 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus Fer4_24 PF18109.1 gi|21226851|ref|NP_632773.1| - 0.19 12.0 0.1 5.2 7.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain Hydantoinase_A PF01968.18 gi|21226852|ref|NP_632774.1| - 6.4e-32 111.0 3.2 4.3e-31 108.3 0.3 2.9 3 1 0 3 3 3 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|21226852|ref|NP_632774.1| - 1.8e-30 106.0 0.8 5.3e-27 94.7 0.0 3.5 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|21226852|ref|NP_632774.1| - 8.2e-06 24.7 0.8 0.041 12.5 0.1 2.2 2 0 0 2 2 2 2 MutL protein ROK PF00480.20 gi|21226852|ref|NP_632774.1| - 0.11 12.0 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 ROK family BcrAD_BadFG PF01869.20 gi|21226852|ref|NP_632774.1| - 0.29 10.6 1.8 0.51 9.8 0.0 2.3 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family Metallophos_2 PF12850.7 gi|21226853|ref|NP_632775.1| - 5.2e-29 101.6 0.0 6.8e-29 101.2 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|21226853|ref|NP_632775.1| - 2.3e-13 51.1 0.0 2.6e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase FBPase_2 PF06874.11 gi|21226853|ref|NP_632775.1| - 0.0003 19.2 0.4 0.016 13.5 0.1 2.1 1 1 1 2 2 2 2 Firmicute fructose-1,6-bisphosphatase Metallophos_2 PF12850.7 gi|21226854|ref|NP_632776.1| - 5.4e-29 101.5 0.1 6.7e-29 101.2 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|21226854|ref|NP_632776.1| - 1.5e-09 38.7 0.6 4.6e-06 27.3 0.1 2.1 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|21226854|ref|NP_632776.1| - 0.0053 16.1 0.5 0.39 10.0 0.1 2.2 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily QueC PF06508.13 gi|21226855|ref|NP_632777.1| - 8e-60 201.9 0.0 9.2e-60 201.7 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|21226855|ref|NP_632777.1| - 7.7e-06 25.8 0.0 1.1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.20 gi|21226855|ref|NP_632777.1| - 0.001 18.9 0.0 0.0029 17.4 0.0 1.7 2 0 0 2 2 2 1 PP-loop family ThiI PF02568.14 gi|21226855|ref|NP_632777.1| - 0.0014 18.2 0.0 0.076 12.6 0.0 2.3 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Fer2 PF00111.27 gi|21226855|ref|NP_632777.1| - 0.081 12.9 0.2 0.15 12.1 0.2 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain tRNA_Me_trans PF03054.16 gi|21226855|ref|NP_632777.1| - 0.12 11.2 0.1 0.37 9.5 0.0 1.7 2 0 0 2 2 2 0 tRNA methyl transferase NAD_synthase PF02540.17 gi|21226855|ref|NP_632777.1| - 0.14 11.2 0.1 0.24 10.5 0.0 1.4 2 0 0 2 2 2 0 NAD synthase DUF366 PF04017.12 gi|21226856|ref|NP_632778.1| - 2.8e-72 242.1 0.9 3.1e-72 241.9 0.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) Radical_SAM PF04055.21 gi|21226857|ref|NP_632779.1| - 6.4e-13 49.4 0.1 9.8e-13 48.8 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|21226857|ref|NP_632779.1| - 1.5e-08 34.8 0.0 2.7e-08 33.9 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|21226857|ref|NP_632779.1| - 4.5e-07 30.2 0.0 6.5e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain PTPS PF01242.19 gi|21226858|ref|NP_632780.1| - 4.3e-27 94.5 0.0 5.3e-27 94.2 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Radical_SAM PF04055.21 gi|21226859|ref|NP_632781.1| - 5e-27 95.3 0.1 7.6e-27 94.7 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|21226859|ref|NP_632781.1| - 4e-06 27.0 0.2 1.1e-05 25.6 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|21226859|ref|NP_632781.1| - 0.0008 19.7 0.0 0.0016 18.7 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain DRY_EERY PF09750.9 gi|21226859|ref|NP_632781.1| - 0.15 12.4 1.7 0.22 11.8 1.7 1.3 1 0 0 1 1 1 0 Alternative splicing regulator Radical_SAM PF04055.21 gi|21226861|ref|NP_632783.1| - 1.8e-24 87.0 0.1 2.7e-24 86.4 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|21226861|ref|NP_632783.1| - 0.00013 22.1 0.1 0.00033 20.8 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|21226861|ref|NP_632783.1| - 0.0016 18.7 0.0 0.0045 17.3 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Poty_PP PF08440.10 gi|21226861|ref|NP_632783.1| - 0.069 12.2 0.1 0.1 11.7 0.1 1.2 1 0 0 1 1 1 0 Potyviridae polyprotein Fer4 PF00037.27 gi|21226862|ref|NP_632784.1| - 8.2e-19 66.6 19.7 9.1e-10 37.9 6.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21226862|ref|NP_632784.1| - 1.4e-14 53.4 19.9 1.3e-07 31.4 5.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21226862|ref|NP_632784.1| - 1.1e-13 51.0 24.9 3.8e-10 39.7 14.1 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21226862|ref|NP_632784.1| - 3.1e-13 48.9 15.7 9.5e-07 28.6 3.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21226862|ref|NP_632784.1| - 4.5e-12 45.9 10.4 5.9e-12 45.6 10.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21226862|ref|NP_632784.1| - 2.3e-11 44.1 12.2 4.7e-11 43.1 12.3 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21226862|ref|NP_632784.1| - 1.8e-10 40.5 11.9 5.6e-05 23.3 1.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21226862|ref|NP_632784.1| - 3.5e-10 39.8 12.7 4.4e-10 39.5 12.7 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21226862|ref|NP_632784.1| - 6.7e-10 39.8 11.1 6.2e-05 23.8 2.6 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|21226862|ref|NP_632784.1| - 7.9e-07 29.5 21.5 0.0049 17.4 2.2 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21226862|ref|NP_632784.1| - 1.4e-06 28.7 12.1 0.0003 21.2 12.1 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21226862|ref|NP_632784.1| - 1.9e-06 28.5 17.8 2.7e-05 24.8 4.6 2.4 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|21226862|ref|NP_632784.1| - 2.4e-06 28.0 17.4 0.0021 18.5 5.2 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|21226862|ref|NP_632784.1| - 7.8e-06 26.5 19.5 0.0025 18.6 6.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21226862|ref|NP_632784.1| - 2e-05 25.3 7.5 0.0087 16.9 1.6 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|21226862|ref|NP_632784.1| - 0.0011 19.0 5.1 0.0011 19.0 5.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21226862|ref|NP_632784.1| - 0.0054 16.9 13.8 0.033 14.4 13.9 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_19 PF06902.11 gi|21226862|ref|NP_632784.1| - 0.073 13.2 5.7 0.099 12.7 5.7 1.3 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Me-amine-dh_L PF02975.14 gi|21226862|ref|NP_632784.1| - 3.6 8.1 11.7 7.3 7.1 2.8 2.0 1 1 1 2 2 2 0 Methylamine dehydrogenase, L chain AIRS PF00586.24 gi|21226863|ref|NP_632785.1| - 1.1e-18 67.6 0.3 4e-18 65.8 0.9 1.6 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|21226863|ref|NP_632785.1| - 4.5e-16 59.4 0.0 8.1e-16 58.5 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain DUF1297 PF06973.12 gi|21226863|ref|NP_632785.1| - 0.063 12.8 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1297) SH3_3 PF08239.11 gi|21226863|ref|NP_632785.1| - 0.065 13.5 0.0 14 6.0 0.0 2.6 2 0 0 2 2 2 0 Bacterial SH3 domain DUF5611 PF18446.1 gi|21226865|ref|NP_632787.1| - 2.1e-34 118.5 0.7 2.3e-34 118.3 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5611) Imm6 PF14434.6 gi|21226865|ref|NP_632787.1| - 0.077 12.9 0.1 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 Immunity protein Imm6 Urease_alpha PF00449.20 gi|21226865|ref|NP_632787.1| - 0.093 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Urease alpha-subunit, N-terminal domain DUF2553 PF10830.8 gi|21226865|ref|NP_632787.1| - 0.11 13.3 0.2 0.28 12.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2553) DUF98 PF01947.16 gi|21226866|ref|NP_632788.1| - 1.7e-16 60.5 0.0 2.2e-16 60.2 0.0 1.1 1 0 0 1 1 1 1 p-hydroxybenzoic acid synthase UTRA PF07702.13 gi|21226866|ref|NP_632788.1| - 5.6e-06 26.3 0.1 7.4e-06 25.9 0.1 1.2 1 0 0 1 1 1 1 UTRA domain Chor_lyase PF04345.13 gi|21226866|ref|NP_632788.1| - 0.012 15.2 0.0 0.014 15.0 0.0 1.1 1 0 0 1 1 1 0 Chorismate lyase TPR_2 PF07719.17 gi|21226867|ref|NP_632789.1| - 1.1e-06 28.2 0.0 2.3e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21226867|ref|NP_632789.1| - 2.1e-05 24.1 0.0 4.3e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|21226867|ref|NP_632789.1| - 0.00099 18.5 0.0 0.0018 17.7 0.0 1.4 1 0 0 1 1 1 1 SHNi-TPR TPR_11 PF13414.6 gi|21226867|ref|NP_632789.1| - 0.0052 16.5 0.0 0.0098 15.6 0.0 1.5 1 0 0 1 1 1 1 TPR repeat TPR_8 PF13181.6 gi|21226867|ref|NP_632789.1| - 0.0069 16.5 0.0 0.022 15.0 0.0 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21226867|ref|NP_632789.1| - 0.045 14.1 0.0 0.088 13.1 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21226867|ref|NP_632789.1| - 0.11 13.4 0.0 0.27 12.2 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat OrfB_Zn_ribbon PF07282.11 gi|21226868|ref|NP_632790.1| - 8.7e-24 83.2 0.4 1.8e-23 82.2 0.4 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|21226868|ref|NP_632790.1| - 3.1e-12 46.8 0.0 6.9e-12 45.6 0.0 1.5 1 0 0 1 1 1 1 Probable transposase C1_2 PF03107.16 gi|21226868|ref|NP_632790.1| - 0.00039 20.7 1.1 0.0008 19.7 1.1 1.5 1 0 0 1 1 1 1 C1 domain C1_1 PF00130.22 gi|21226868|ref|NP_632790.1| - 0.008 16.0 1.1 0.019 14.8 1.1 1.5 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2175 PF09943.9 gi|21226869|ref|NP_632791.1| - 0.003 17.8 2.2 0.025 14.9 0.4 2.4 2 1 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2175) DZR PF12773.7 gi|21226869|ref|NP_632791.1| - 0.037 14.0 8.5 4.7 7.3 8.5 2.9 1 1 0 1 1 1 0 Double zinc ribbon Nudix_N_2 PF14803.6 gi|21226869|ref|NP_632791.1| - 0.056 13.4 3.2 3.1 7.8 0.2 3.0 3 0 0 3 3 3 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|21226869|ref|NP_632791.1| - 0.068 12.9 4.8 5.1 7.0 0.1 2.9 2 1 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|21226869|ref|NP_632791.1| - 0.17 11.6 2.3 0.25 11.0 0.2 2.1 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF2039 PF10217.9 gi|21226869|ref|NP_632791.1| - 0.17 12.2 2.4 0.41 11.0 0.0 2.3 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2039) A2L_zn_ribbon PF08792.10 gi|21226869|ref|NP_632791.1| - 0.38 10.5 11.1 3.5 7.5 0.1 3.8 4 0 0 4 4 4 0 A2L zinc ribbon domain zf_UBZ PF18439.1 gi|21226869|ref|NP_632791.1| - 0.42 10.3 0.1 0.42 10.3 0.1 2.8 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger NOB1_Zn_bind PF08772.11 gi|21226869|ref|NP_632791.1| - 5.9 7.1 8.8 2.8 8.2 0.1 2.8 2 1 1 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like ATPgrasp_TupA PF14305.6 gi|21226870|ref|NP_632792.1| - 8.6e-80 268.0 0.6 1e-79 267.7 0.6 1.1 1 0 0 1 1 1 1 TupA-like ATPgrasp Metallophos_2 PF12850.7 gi|21226871|ref|NP_632793.1| - 9.3e-05 22.7 0.0 0.00012 22.3 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DHHA1 PF02272.19 gi|21226872|ref|NP_632794.1| - 6.5e-06 26.6 0.0 1e-05 25.9 0.0 1.4 1 0 0 1 1 1 1 DHHA1 domain DDE_Tnp_1 PF01609.21 gi|21226873|ref|NP_632795.1| - 3.3e-10 40.0 2.4 7.1e-10 38.9 2.4 1.5 1 1 0 1 1 1 1 Transposase DDE domain Tn7_Tnp_TnsA_N PF08722.11 gi|21226873|ref|NP_632795.1| - 0.46 10.7 3.3 16 5.8 0.0 2.8 2 1 0 2 2 2 0 TnsA endonuclease N terminal DUF1699 PF08004.11 gi|21226874|ref|NP_632796.1| - 1.2e-61 206.1 0.9 1.4e-61 205.9 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) DUF4394 PF14339.6 gi|21226874|ref|NP_632796.1| - 0.035 13.5 0.0 0.049 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) Img2 PF05046.14 gi|21226874|ref|NP_632796.1| - 0.058 13.7 0.1 0.084 13.2 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) PAM2 PF07145.15 gi|21226874|ref|NP_632796.1| - 0.13 12.0 0.2 19 5.2 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region ChaB PF06150.12 gi|21226875|ref|NP_632797.1| - 2.7e-27 95.1 2.9 3.2e-27 94.9 2.9 1.1 1 0 0 1 1 1 1 ChaB Chorismate_synt PF01264.21 gi|21226875|ref|NP_632797.1| - 0.11 11.2 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Chorismate synthase DUF1699 PF08004.11 gi|21226876|ref|NP_632798.1| - 1.2e-62 209.3 2.6 1.3e-62 209.2 2.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|21226876|ref|NP_632798.1| - 0.0088 16.3 0.1 0.014 15.7 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) PAM2 PF07145.15 gi|21226876|ref|NP_632798.1| - 0.095 12.4 0.3 12 5.8 0.1 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region SlyX PF04102.12 gi|21226877|ref|NP_632799.1| - 4.5e-08 33.6 46.1 0.0035 17.9 0.8 6.9 2 2 5 8 8 8 5 SlyX PKcGMP_CC PF16808.5 gi|21226877|ref|NP_632799.1| - 6.8e-06 25.8 86.3 0.00078 19.2 0.8 10.9 7 3 6 13 13 13 5 Coiled-coil N-terminus of cGMP-dependent protein kinase ATG16 PF08614.11 gi|21226877|ref|NP_632799.1| - 8.1e-06 26.2 65.6 0.062 13.5 14.7 4.7 1 1 4 5 5 5 3 Autophagy protein 16 (ATG16) Fez1 PF06818.15 gi|21226877|ref|NP_632799.1| - 1.7e-05 25.4 64.8 0.22 12.0 17.1 4.7 1 1 4 5 5 5 4 Fez1 ERM PF00769.19 gi|21226877|ref|NP_632799.1| - 1.7e-05 24.8 73.0 0.0033 17.3 22.0 4.1 1 1 3 4 4 4 3 Ezrin/radixin/moesin family Fib_alpha PF08702.10 gi|21226877|ref|NP_632799.1| - 7.3e-05 23.0 47.4 0.023 14.9 6.4 6.0 1 1 5 6 6 6 4 Fibrinogen alpha/beta chain family DUF16 PF01519.16 gi|21226877|ref|NP_632799.1| - 0.00012 22.5 57.1 0.03 14.8 5.4 6.5 1 1 4 5 5 4 2 Protein of unknown function DUF16 HOOK PF05622.12 gi|21226877|ref|NP_632799.1| - 0.00022 19.5 68.2 0.0091 14.2 27.8 3.6 1 1 3 4 4 4 3 HOOK protein Cast PF10174.9 gi|21226877|ref|NP_632799.1| - 0.00023 19.6 68.0 0.0061 14.9 41.4 2.4 1 1 1 2 2 2 2 RIM-binding protein of the cytomatrix active zone AAA_13 PF13166.6 gi|21226877|ref|NP_632799.1| - 0.00025 19.8 26.8 0.00025 19.8 26.8 3.0 1 1 2 3 3 3 2 AAA domain TPR_7 PF13176.6 gi|21226877|ref|NP_632799.1| - 0.0042 17.0 0.4 0.21 11.7 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat Tropomyosin_1 PF12718.7 gi|21226877|ref|NP_632799.1| - 0.0088 16.2 80.8 0.13 12.4 13.7 5.7 1 1 4 5 5 5 3 Tropomyosin like MscS_porin PF12795.7 gi|21226877|ref|NP_632799.1| - 0.012 15.2 5.1 0.012 15.2 5.1 4.5 1 1 3 5 5 5 0 Mechanosensitive ion channel porin domain Spc7 PF08317.11 gi|21226877|ref|NP_632799.1| - 0.091 11.6 74.2 0.14 11.1 18.1 4.6 1 1 4 5 5 5 0 Spc7 kinetochore protein HIP1_clath_bdg PF16515.5 gi|21226877|ref|NP_632799.1| - 0.19 12.4 60.7 0.15 12.7 6.9 5.8 1 1 4 5 5 5 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4201 PF13870.6 gi|21226877|ref|NP_632799.1| - 0.39 10.4 66.4 0.05 13.3 11.5 5.2 1 1 4 5 5 5 0 Domain of unknown function (DUF4201) Phage_tail_NK PF16532.5 gi|21226877|ref|NP_632799.1| - 0.62 9.7 3.6 29 4.2 0.0 3.6 4 0 0 4 4 4 0 Sf6-type phage tail needle knob or tip of some Caudovirales Phage_int_SAM_2 PF12834.7 gi|21226877|ref|NP_632799.1| - 0.68 10.7 5.0 7 7.4 0.3 4.0 3 1 1 4 4 4 0 Phage integrase, N-terminal Lebercilin PF15619.6 gi|21226877|ref|NP_632799.1| - 0.95 9.1 68.7 0.062 13.0 14.2 4.1 1 1 3 4 4 4 0 Ciliary protein causing Leber congenital amaurosis disease HemX PF04375.14 gi|21226877|ref|NP_632799.1| - 0.96 8.7 33.8 0.65 9.2 3.2 4.3 1 1 3 4 4 4 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF4200 PF13863.6 gi|21226877|ref|NP_632799.1| - 1.2 9.5 76.2 3 8.3 6.4 5.2 1 1 4 5 5 5 0 Domain of unknown function (DUF4200) DUF641 PF04859.12 gi|21226877|ref|NP_632799.1| - 1.3 9.4 60.3 4.1 7.8 0.2 7.9 1 1 8 9 9 9 0 Plant protein of unknown function (DUF641) BLOC1_2 PF10046.9 gi|21226877|ref|NP_632799.1| - 1.6 9.1 51.0 2.9 8.3 0.9 6.1 1 1 5 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Nsp1_C PF05064.13 gi|21226877|ref|NP_632799.1| - 1.7 8.5 45.9 0.48 10.2 3.5 5.3 1 1 4 5 5 5 0 Nsp1-like C-terminal region CENP-F_leu_zip PF10473.9 gi|21226877|ref|NP_632799.1| - 2.7 8.0 84.0 2.5 8.1 20.0 5.1 1 1 4 5 5 5 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HMMR_N PF15905.5 gi|21226877|ref|NP_632799.1| - 3.7 6.9 78.2 1.1 8.7 30.5 4.0 1 1 3 4 4 4 0 Hyaluronan mediated motility receptor N-terminal DUF3552 PF12072.8 gi|21226877|ref|NP_632799.1| - 5.4 6.4 84.4 0.78 9.1 12.2 5.6 1 1 4 5 5 4 0 Domain of unknown function (DUF3552) Tropomyosin PF00261.20 gi|21226877|ref|NP_632799.1| - 6.3 6.1 80.8 4.8 6.5 19.6 3.5 1 1 2 3 3 3 0 Tropomyosin FPP PF05911.11 gi|21226877|ref|NP_632799.1| - 6.6 4.8 69.0 0.066 11.4 12.0 3.9 1 1 3 4 4 4 0 Filament-like plant protein, long coiled-coil NPV_P10 PF05531.12 gi|21226877|ref|NP_632799.1| - 7.2 7.2 20.5 13 6.3 1.2 5.6 3 2 3 6 6 5 0 Nucleopolyhedrovirus P10 protein HrpB7 PF09486.10 gi|21226877|ref|NP_632799.1| - 9.7 6.6 34.5 2.6 8.4 0.3 5.5 1 1 3 5 5 5 0 Bacterial type III secretion protein (HrpB7) Mod_r PF07200.13 gi|21226877|ref|NP_632799.1| - 9.7 6.3 56.6 7.7 6.6 8.5 5.2 1 1 4 5 5 5 0 Modifier of rudimentary (Mod(r)) protein DUF1699 PF08004.11 gi|21226878|ref|NP_632800.1| - 1.7e-48 163.6 0.1 1.9e-48 163.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Sua5_yciO_yrdC PF01300.18 gi|21226879|ref|NP_632801.1| - 7.3e-44 149.4 0.0 1.3e-43 148.6 0.0 1.4 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.12 gi|21226879|ref|NP_632801.1| - 2.9e-32 110.1 17.8 1.1e-16 60.3 5.7 2.5 2 0 0 2 2 2 2 HypF finger HypF_C PF17788.1 gi|21226879|ref|NP_632801.1| - 3.1e-24 85.6 0.5 6e-24 84.7 0.5 1.5 1 0 0 1 1 1 1 HypF Kae1-like domain Acylphosphatase PF00708.18 gi|21226879|ref|NP_632801.1| - 2.3e-21 76.0 0.0 7.9e-21 74.3 0.0 1.9 2 0 0 2 2 2 1 Acylphosphatase Peptidase_M22 PF00814.25 gi|21226879|ref|NP_632801.1| - 0.014 15.2 0.0 0.023 14.4 0.0 1.3 1 0 0 1 1 1 0 Glycoprotease family DZR PF12773.7 gi|21226879|ref|NP_632801.1| - 0.021 14.8 7.6 0.35 10.9 0.4 2.4 2 0 0 2 2 2 0 Double zinc ribbon Cys_rich_KTR PF14205.6 gi|21226879|ref|NP_632801.1| - 1.5 8.7 5.3 7.2 6.5 1.5 2.5 2 0 0 2 2 2 0 Cysteine-rich KTR LIM PF00412.22 gi|21226879|ref|NP_632801.1| - 1.8 8.8 5.2 24 5.2 1.4 2.5 1 1 1 2 2 2 0 LIM domain Zn-ribbon_8 PF09723.10 gi|21226879|ref|NP_632801.1| - 4.6 7.5 14.6 74 3.6 0.1 3.4 2 1 0 2 2 2 0 Zinc ribbon domain NMD3 PF04981.13 gi|21226879|ref|NP_632801.1| - 4.9 6.5 7.4 3.1 7.2 0.4 2.2 1 1 1 2 2 2 0 NMD3 family FYDLN_acid PF09538.10 gi|21226879|ref|NP_632801.1| - 5.4 7.7 5.4 0.47 11.2 0.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) ATP-synt_D PF01813.17 gi|21226880|ref|NP_632802.1| - 7.9e-57 192.3 7.5 8.9e-57 192.1 7.5 1.0 1 0 0 1 1 1 1 ATP synthase subunit D ATP-synt_ab PF00006.25 gi|21226881|ref|NP_632803.1| - 3.2e-65 219.8 0.0 4.2e-65 219.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|21226881|ref|NP_632803.1| - 1.4e-13 51.2 2.1 1.4e-13 51.2 2.1 1.8 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|21226881|ref|NP_632803.1| - 0.0013 18.9 0.5 0.0036 17.4 0.5 1.8 1 0 0 1 1 1 1 HAS barrel domain DUF561 PF04481.12 gi|21226881|ref|NP_632803.1| - 0.018 14.2 0.0 0.03 13.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) ATP-synt_ab PF00006.25 gi|21226882|ref|NP_632804.1| - 3e-95 317.9 0.0 4.5e-95 317.3 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|21226882|ref|NP_632804.1| - 7.2e-42 142.1 0.1 1.4e-41 141.1 0.1 1.5 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|21226882|ref|NP_632804.1| - 3.8e-11 43.3 2.3 1.7e-10 41.2 2.0 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain RnfC_N PF13375.6 gi|21226882|ref|NP_632804.1| - 0.004 17.1 0.2 0.012 15.6 0.2 1.7 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain AAA_22 PF13401.6 gi|21226882|ref|NP_632804.1| - 0.094 13.0 0.0 0.22 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATP-synt_F PF01990.17 gi|21226883|ref|NP_632805.1| - 3.4e-14 52.9 0.0 3.8e-14 52.8 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit vATP-synt_AC39 PF01992.16 gi|21226884|ref|NP_632806.1| - 2.8e-71 240.7 7.2 3.2e-71 240.6 7.2 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit vATP-synt_E PF01991.18 gi|21226885|ref|NP_632807.1| - 3.7e-18 65.7 14.9 2.3e-09 36.9 13.2 2.0 1 1 1 2 2 2 2 ATP synthase (E/31 kDa) subunit DUF4047 PF13256.6 gi|21226885|ref|NP_632807.1| - 0.09 13.0 3.1 0.14 12.3 3.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4047) OmpH PF03938.14 gi|21226885|ref|NP_632807.1| - 0.13 12.5 9.6 0.25 11.7 9.6 1.5 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) V-ATPase_G PF03179.15 gi|21226885|ref|NP_632807.1| - 0.17 12.5 8.0 0.15 12.6 6.2 1.9 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF1104 PF06518.11 gi|21226885|ref|NP_632807.1| - 0.42 11.0 6.6 0.5 10.8 3.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1104) EF-G-binding_N PF07299.11 gi|21226885|ref|NP_632807.1| - 0.47 11.0 5.0 0.92 10.1 0.3 2.8 2 2 0 2 2 2 0 Elongation factor G-binding protein, N-terminal RNase_J_C PF17770.1 gi|21226885|ref|NP_632807.1| - 0.72 10.9 5.4 0.61 11.2 0.9 2.8 1 1 1 3 3 3 0 Ribonuclease J C-terminal domain ATP-synt_C PF00137.21 gi|21226886|ref|NP_632808.1| - 2.4e-14 53.4 11.4 3.2e-14 53.0 11.4 1.2 1 0 0 1 1 1 1 ATP synthase subunit C CinA PF02464.17 gi|21226886|ref|NP_632808.1| - 0.017 14.7 0.6 0.018 14.6 0.6 1.1 1 0 0 1 1 1 0 Competence-damaged protein V_ATPase_I PF01496.19 gi|21226887|ref|NP_632809.1| - 1.2e-27 96.3 7.4 1.8e-17 62.6 0.3 3.6 2 1 0 3 3 3 2 V-type ATPase 116kDa subunit family Vps51 PF08700.11 gi|21226887|ref|NP_632809.1| - 0.029 14.5 1.5 1.6 8.9 0.1 2.7 2 1 0 2 2 2 0 Vps51/Vps67 MPS2 PF17060.5 gi|21226887|ref|NP_632809.1| - 0.031 13.5 1.4 0.065 12.5 0.5 1.9 2 0 0 2 2 2 0 Monopolar spindle protein 2 MerR-DNA-bind PF09278.11 gi|21226887|ref|NP_632809.1| - 0.035 14.7 0.7 19 5.9 0.1 3.5 3 0 0 3 3 3 0 MerR, DNA binding TOM13 PF08219.11 gi|21226887|ref|NP_632809.1| - 0.035 14.1 0.0 0.13 12.3 0.0 1.9 1 0 0 1 1 1 0 Outer membrane protein TOM13 DUF5082 PF16888.5 gi|21226887|ref|NP_632809.1| - 0.043 14.1 2.1 0.13 12.6 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) DivIC PF04977.15 gi|21226887|ref|NP_632809.1| - 0.14 11.9 4.6 5.2 6.9 1.7 2.7 2 0 0 2 2 2 0 Septum formation initiator SKA1 PF07160.12 gi|21226887|ref|NP_632809.1| - 0.17 11.7 0.8 0.29 10.9 0.2 1.7 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 DUF3450 PF11932.8 gi|21226887|ref|NP_632809.1| - 0.23 10.7 1.5 0.49 9.7 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF1351 PF07083.11 gi|21226887|ref|NP_632809.1| - 0.25 11.1 5.8 0.38 10.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1351) Atg14 PF10186.9 gi|21226887|ref|NP_632809.1| - 0.36 9.9 1.7 0.28 10.2 0.2 1.5 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 CENP-F_leu_zip PF10473.9 gi|21226887|ref|NP_632809.1| - 0.36 10.8 4.1 9.4 6.3 0.5 2.4 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BLOC1_2 PF10046.9 gi|21226887|ref|NP_632809.1| - 0.39 11.0 4.2 10 6.5 0.9 2.6 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4200 PF13863.6 gi|21226887|ref|NP_632809.1| - 1.1 9.6 3.9 2 8.8 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) UPF0242 PF06785.11 gi|21226887|ref|NP_632809.1| - 1.2 9.2 4.9 0.57 10.3 0.3 2.5 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 gi|21226887|ref|NP_632809.1| - 1.3 9.6 7.9 2.1 8.9 2.4 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region ATG16 PF08614.11 gi|21226887|ref|NP_632809.1| - 1.9 8.7 6.0 2 8.6 3.1 2.0 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 gi|21226887|ref|NP_632809.1| - 2.3 8.3 7.7 2.4 8.2 3.5 2.7 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF4164 PF13747.6 gi|21226887|ref|NP_632809.1| - 3.7 7.9 5.8 1.9 8.8 1.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) 4HB_MCP_1 PF12729.7 gi|21226887|ref|NP_632809.1| - 4.4 6.8 6.7 19 4.7 0.1 3.4 3 0 0 3 3 3 0 Four helix bundle sensory module for signal transduction ZapB PF06005.12 gi|21226887|ref|NP_632809.1| - 5.6 7.5 7.8 10 6.6 1.1 2.3 2 0 0 2 2 2 0 Cell division protein ZapB ABC_tran_CTD PF16326.5 gi|21226887|ref|NP_632809.1| - 7.2 6.9 8.2 16 5.9 0.7 2.8 2 1 0 2 2 2 0 ABC transporter C-terminal domain V-ATPase_G_2 PF16999.5 gi|21226888|ref|NP_632810.1| - 2.1e-06 28.1 10.8 2.5e-06 27.9 10.8 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit V-ATPase_G PF03179.15 gi|21226888|ref|NP_632810.1| - 0.011 16.3 8.8 0.015 15.9 8.8 1.3 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 gi|21226888|ref|NP_632810.1| - 0.025 14.6 15.2 0.18 11.9 7.3 2.0 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) LsmAD PF06741.13 gi|21226888|ref|NP_632810.1| - 4.2 8.0 6.7 4.4 7.9 5.8 1.6 1 1 0 1 1 1 0 LsmAD domain Y1_Tnp PF01797.16 gi|21226889|ref|NP_632811.1| - 1.3e-34 118.8 0.9 1.6e-34 118.6 0.9 1.1 1 0 0 1 1 1 1 Transposase IS200 like Radical_SAM PF04055.21 gi|21226890|ref|NP_632812.1| - 4e-15 56.6 0.0 6e-15 56.0 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|21226890|ref|NP_632812.1| - 1.7e-09 38.1 0.1 4.6e-09 36.6 0.1 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain polyprenyl_synt PF00348.17 gi|21226891|ref|NP_632813.1| - 1e-47 162.3 0.0 1.3e-47 162.0 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase CcmE PF03100.15 gi|21226892|ref|NP_632814.1| - 1.6e-19 70.1 0.0 1.8e-19 70.0 0.0 1.0 1 0 0 1 1 1 1 CcmE ACT PF01842.25 gi|21226894|ref|NP_632816.1| - 3.6e-08 33.0 0.0 4.7e-07 29.5 0.0 2.5 2 0 0 2 2 2 1 ACT domain Lactamase_B PF00753.27 gi|21226894|ref|NP_632816.1| - 2.2e-06 27.8 0.0 5e-06 26.7 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Thr_dehydrat_C PF00585.18 gi|21226894|ref|NP_632816.1| - 0.0001 22.0 0.0 0.34 10.7 0.0 2.6 1 1 1 2 2 2 2 C-terminal regulatory domain of Threonine dehydratase ACT_4 PF13291.6 gi|21226894|ref|NP_632816.1| - 0.013 16.1 0.0 8.7 7.0 0.0 2.5 2 0 0 2 2 2 0 ACT domain TetR_C_5 PF08360.11 gi|21226894|ref|NP_632816.1| - 0.021 15.0 0.1 0.046 13.9 0.1 1.5 1 0 0 1 1 1 0 QacR-like protein, C-terminal region Lactamase_B_2 PF12706.7 gi|21226894|ref|NP_632816.1| - 0.045 13.3 0.0 0.075 12.5 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF123 PF01986.16 gi|21226895|ref|NP_632817.1| - 3.8e-29 101.1 0.0 4.7e-29 100.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF123 ADP_ribosyl_GH PF03747.14 gi|21226896|ref|NP_632818.1| - 3.3e-66 224.0 0.2 3.9e-66 223.7 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Inhibitor_I42 PF09394.10 gi|21226897|ref|NP_632819.1| - 1.9e-12 47.4 0.0 3.4e-12 46.6 0.0 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 Inhibitor_I71 PF12628.7 gi|21226897|ref|NP_632819.1| - 0.025 14.5 2.6 0.56 10.0 0.4 2.7 1 1 2 3 3 3 0 Falstatin, cysteine peptidase inhibitor Hexapep_2 PF14602.6 gi|21226897|ref|NP_632819.1| - 0.12 12.2 0.9 0.21 11.3 0.2 1.8 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase AAA PF00004.29 gi|21226900|ref|NP_632822.1| - 4e-43 147.0 0.0 1e-42 145.7 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|21226900|ref|NP_632822.1| - 3.3e-12 46.0 0.0 1.1e-11 44.3 0.1 1.9 2 0 0 2 2 2 1 AAA+ lid domain AAA_16 PF13191.6 gi|21226900|ref|NP_632822.1| - 4.1e-06 27.3 0.1 0.00048 20.6 0.1 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 gi|21226900|ref|NP_632822.1| - 5.6e-05 23.2 0.1 0.00019 21.5 0.1 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|21226900|ref|NP_632822.1| - 7.1e-05 22.6 0.0 0.00024 20.9 0.0 1.9 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|21226900|ref|NP_632822.1| - 0.00019 21.7 0.1 0.01 16.1 0.1 2.5 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.14 gi|21226900|ref|NP_632822.1| - 0.00019 21.6 0.0 0.00044 20.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_14 PF13173.6 gi|21226900|ref|NP_632822.1| - 0.0028 17.7 0.0 0.0092 16.0 0.0 1.8 2 0 0 2 2 1 1 AAA domain AAA_33 PF13671.6 gi|21226900|ref|NP_632822.1| - 0.0049 17.0 0.0 0.0097 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|21226900|ref|NP_632822.1| - 0.0065 15.8 0.0 0.035 13.4 0.0 2.1 1 1 1 2 2 2 1 KaiC Torsin PF06309.11 gi|21226900|ref|NP_632822.1| - 0.0066 16.5 0.0 0.015 15.4 0.0 1.5 1 0 0 1 1 1 1 Torsin RNA_helicase PF00910.22 gi|21226900|ref|NP_632822.1| - 0.007 16.7 0.0 0.013 15.9 0.0 1.4 1 0 0 1 1 1 1 RNA helicase CPT PF07931.12 gi|21226900|ref|NP_632822.1| - 0.0071 16.2 0.0 0.013 15.3 0.0 1.4 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein AAA_3 PF07726.11 gi|21226900|ref|NP_632822.1| - 0.0075 16.1 0.0 0.017 15.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|21226900|ref|NP_632822.1| - 0.0092 15.7 0.1 0.047 13.4 0.0 2.2 3 0 0 3 3 3 1 Sigma-54 interaction domain TIP49 PF06068.13 gi|21226900|ref|NP_632822.1| - 0.0095 15.2 0.0 0.018 14.2 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain Sigma54_activ_2 PF14532.6 gi|21226900|ref|NP_632822.1| - 0.011 15.8 0.0 0.078 13.1 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|21226900|ref|NP_632822.1| - 0.013 15.2 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 gi|21226900|ref|NP_632822.1| - 0.019 14.2 0.0 0.03 13.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_17 PF13207.6 gi|21226900|ref|NP_632822.1| - 0.033 14.6 0.2 0.52 10.7 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|21226900|ref|NP_632822.1| - 0.047 14.2 0.0 0.13 12.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|21226900|ref|NP_632822.1| - 0.049 13.0 0.1 0.11 11.8 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Viral_helicase1 PF01443.18 gi|21226900|ref|NP_632822.1| - 0.052 13.3 0.0 0.088 12.5 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_28 PF13521.6 gi|21226900|ref|NP_632822.1| - 0.062 13.5 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|21226900|ref|NP_632822.1| - 0.075 12.2 0.0 0.14 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) YabA PF06156.13 gi|21226900|ref|NP_632822.1| - 0.085 13.5 0.3 0.19 12.4 0.3 1.5 1 0 0 1 1 1 0 Initiation control protein YabA NACHT PF05729.12 gi|21226900|ref|NP_632822.1| - 0.089 12.7 0.3 0.25 11.2 0.2 1.8 1 1 1 2 2 2 0 NACHT domain NB-ARC PF00931.22 gi|21226900|ref|NP_632822.1| - 0.1 11.7 0.0 0.5 9.5 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain Zeta_toxin PF06414.12 gi|21226900|ref|NP_632822.1| - 0.13 11.5 0.0 0.28 10.5 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin TsaE PF02367.17 gi|21226900|ref|NP_632822.1| - 0.17 11.9 0.0 0.33 11.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 gi|21226900|ref|NP_632822.1| - 0.22 10.6 0.0 0.38 9.8 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF131 PF01998.17 gi|21226901|ref|NP_632823.1| - 2.9e-12 46.1 3.5 2.9e-12 46.1 3.5 2.0 1 1 1 2 2 2 1 Protein of unknown function DUF131 HRG PF16954.5 gi|21226901|ref|NP_632823.1| - 0.017 15.5 2.4 2.4 8.6 0.5 2.1 2 0 0 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene TMEM174 PF15029.6 gi|21226901|ref|NP_632823.1| - 0.25 11.0 0.4 0.28 10.9 0.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 174 DUF131 PF01998.17 gi|21226902|ref|NP_632824.1| - 6.5e-24 83.4 0.1 7.6e-24 83.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF131 Adenylsucc_synt PF00709.21 gi|21226903|ref|NP_632825.1| - 2.3e-132 441.9 0.4 2.8e-132 441.6 0.4 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Ribosomal_S19e PF01090.19 gi|21226904|ref|NP_632826.1| - 4e-54 182.0 0.0 4.5e-54 181.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.13 gi|21226904|ref|NP_632826.1| - 0.051 13.5 0.0 17 5.4 0.0 2.7 3 0 0 3 3 3 0 RuvB C-terminal winged helix domain dsDNA_bind PF01984.20 gi|21226905|ref|NP_632827.1| - 9.1e-29 100.0 18.4 1e-28 99.8 18.4 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain cwf18 PF08315.12 gi|21226905|ref|NP_632827.1| - 0.021 15.5 8.6 0.025 15.2 8.6 1.0 1 0 0 1 1 1 0 cwf18 pre-mRNA splicing factor DUF4355 PF14265.6 gi|21226905|ref|NP_632827.1| - 0.34 11.2 14.2 0.053 13.8 10.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4355) Asn_synthase PF00733.21 gi|21226906|ref|NP_632828.1| - 0.0016 18.2 0.0 0.0028 17.4 0.0 1.4 2 0 0 2 2 2 1 Asparagine synthase QueC PF06508.13 gi|21226906|ref|NP_632828.1| - 0.017 14.6 0.0 0.025 14.1 0.0 1.2 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 gi|21226906|ref|NP_632828.1| - 0.045 13.3 0.0 0.16 11.4 0.0 1.8 2 0 0 2 2 2 0 Diphthamide synthase tRNA_Me_trans PF03054.16 gi|21226906|ref|NP_632828.1| - 0.06 12.1 0.0 0.11 11.3 0.0 1.6 2 0 0 2 2 2 0 tRNA methyl transferase Ribosomal_L39 PF00832.20 gi|161485680|ref|NP_632829.2| - 6.8e-20 70.4 7.9 7.7e-20 70.2 7.9 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein FTA2 PF13095.6 gi|161485680|ref|NP_632829.2| - 0.11 12.1 0.1 0.11 12.1 0.1 1.0 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Ribosomal_L31e PF01198.19 gi|21226908|ref|NP_632830.1| - 1.9e-12 47.3 0.1 2.3e-12 47.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e eIF-6 PF01912.18 gi|21226909|ref|NP_632831.1| - 4.8e-67 225.2 1.2 5.7e-67 224.9 1.2 1.0 1 0 0 1 1 1 1 eIF-6 family Ribosomal_L18A PF01775.17 gi|21226910|ref|NP_632832.1| - 1.9e-12 47.3 0.5 2.1e-12 47.2 0.5 1.0 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A DUF5035 PF16438.5 gi|21226910|ref|NP_632832.1| - 0.017 15.0 0.3 0.018 14.9 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5035) Prefoldin PF02996.17 gi|21226911|ref|NP_632833.1| - 2.9e-30 104.7 2.8 2.9e-30 104.7 2.8 1.3 1 1 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|21226911|ref|NP_632833.1| - 6.8e-06 26.0 5.9 0.00058 19.8 0.5 2.3 2 0 0 2 2 2 2 Prefoldin subunit CENP-F_leu_zip PF10473.9 gi|21226911|ref|NP_632833.1| - 0.00037 20.5 6.6 0.017 15.1 0.8 2.1 2 0 0 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 XRCC4 PF06632.12 gi|21226911|ref|NP_632833.1| - 0.0011 18.0 0.9 0.12 11.2 0.0 2.0 2 0 0 2 2 2 1 DNA double-strand break repair and V(D)J recombination protein XRCC4 IES5 PF17335.2 gi|21226911|ref|NP_632833.1| - 0.0015 18.7 0.3 0.11 12.8 0.0 2.1 2 0 0 2 2 2 1 Ino80 complex subunit 5 DUF3138 PF11336.8 gi|21226911|ref|NP_632833.1| - 0.0023 16.6 2.6 0.0023 16.6 2.6 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3138) RasGAP_C PF03836.15 gi|21226911|ref|NP_632833.1| - 0.0027 17.9 0.5 2.5 8.2 0.1 2.1 2 0 0 2 2 2 0 RasGAP C-terminus DUF3450 PF11932.8 gi|21226911|ref|NP_632833.1| - 0.0028 17.0 10.2 0.1 11.9 1.2 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF3450) DUF948 PF06103.11 gi|21226911|ref|NP_632833.1| - 0.003 17.8 2.7 0.073 13.3 0.2 2.2 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) TACC_C PF05010.14 gi|21226911|ref|NP_632833.1| - 0.0035 17.1 2.3 0.0046 16.8 2.3 1.1 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Peptidase_M13_N PF05649.13 gi|21226911|ref|NP_632833.1| - 0.0043 16.8 0.2 0.0058 16.4 0.2 1.3 1 1 0 1 1 1 1 Peptidase family M13 FapA PF03961.13 gi|21226911|ref|NP_632833.1| - 0.0054 15.4 1.3 0.72 8.4 0.1 2.0 2 0 0 2 2 2 1 Flagellar Assembly Protein A CdvA PF18822.1 gi|21226911|ref|NP_632833.1| - 0.0069 16.2 5.3 0.36 10.6 0.9 2.3 2 1 0 2 2 2 1 CdvA-like coiled-coil domain PI3K_P85_iSH2 PF16454.5 gi|21226911|ref|NP_632833.1| - 0.0082 15.8 3.5 0.7 9.5 0.3 2.2 2 0 0 2 2 2 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF1664 PF07889.12 gi|21226911|ref|NP_632833.1| - 0.01 15.9 4.1 1.5 8.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 gi|21226911|ref|NP_632833.1| - 0.011 14.6 11.9 0.13 11.1 3.2 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein Seryl_tRNA_N PF02403.22 gi|21226911|ref|NP_632833.1| - 0.013 15.8 6.5 0.26 11.6 1.1 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain JIP_LZII PF16471.5 gi|21226911|ref|NP_632833.1| - 0.014 15.5 6.6 0.39 10.9 0.6 2.2 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II APG17 PF04108.12 gi|21226911|ref|NP_632833.1| - 0.017 14.2 4.0 0.33 10.0 1.2 2.0 2 0 0 2 2 2 0 Autophagy protein Apg17 Sec3_C_2 PF15278.6 gi|21226911|ref|NP_632833.1| - 0.019 15.3 0.6 7.7 6.9 0.1 2.2 2 0 0 2 2 2 0 Sec3 exocyst complex subunit TMPIT PF07851.13 gi|21226911|ref|NP_632833.1| - 0.02 14.1 3.8 0.038 13.2 3.3 1.6 1 1 0 1 1 1 0 TMPIT-like protein DUF148 PF02520.17 gi|21226911|ref|NP_632833.1| - 0.021 14.9 7.0 0.23 11.6 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF148 Rx_N PF18052.1 gi|21226911|ref|NP_632833.1| - 0.027 14.7 2.3 0.49 10.7 0.3 2.2 2 0 0 2 2 2 0 Rx N-terminal domain KxDL PF10241.9 gi|21226911|ref|NP_632833.1| - 0.028 14.7 4.7 0.14 12.4 0.4 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein Baculo_PEP_C PF04513.12 gi|21226911|ref|NP_632833.1| - 0.032 14.3 1.6 2.5 8.1 0.2 2.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus SIKE PF05769.11 gi|21226911|ref|NP_632833.1| - 0.033 14.1 5.0 0.056 13.4 0.9 2.0 2 0 0 2 2 2 0 SIKE family HAUS-augmin3 PF14932.6 gi|21226911|ref|NP_632833.1| - 0.034 13.7 7.0 0.25 10.9 0.3 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 AIP3 PF03915.13 gi|21226911|ref|NP_632833.1| - 0.037 13.1 1.9 0.039 13.1 1.9 1.0 1 0 0 1 1 1 0 Actin interacting protein 3 UPF0242 PF06785.11 gi|21226911|ref|NP_632833.1| - 0.037 14.1 3.8 1.9 8.5 0.2 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF4795 PF16043.5 gi|21226911|ref|NP_632833.1| - 0.038 13.6 3.9 1 8.9 0.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) WXG100 PF06013.12 gi|21226911|ref|NP_632833.1| - 0.038 14.2 7.4 0.54 10.5 0.2 2.5 2 1 0 2 2 2 0 Proteins of 100 residues with WXG MCU PF04678.13 gi|21226911|ref|NP_632833.1| - 0.044 13.9 6.2 0.098 12.8 0.5 2.1 1 1 1 2 2 2 0 Mitochondrial calcium uniporter DHR10 PF18595.1 gi|21226911|ref|NP_632833.1| - 0.045 13.8 10.6 0.2 11.7 0.6 2.5 2 1 0 2 2 2 0 Designed helical repeat protein 10 domain DUF1043 PF06295.12 gi|21226911|ref|NP_632833.1| - 0.047 13.7 3.7 0.061 13.3 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) Laminin_I PF06008.14 gi|21226911|ref|NP_632833.1| - 0.053 13.2 8.8 0.41 10.3 1.7 2.1 2 0 0 2 2 2 0 Laminin Domain I Rho_Binding PF08912.11 gi|21226911|ref|NP_632833.1| - 0.056 14.3 5.7 1.9 9.4 0.5 2.4 2 0 0 2 2 2 0 Rho Binding YqjK PF13997.6 gi|21226911|ref|NP_632833.1| - 0.064 13.5 0.5 0.3 11.4 0.1 2.2 2 1 0 2 2 2 0 YqjK-like protein Med10 PF09748.9 gi|21226911|ref|NP_632833.1| - 0.07 13.1 1.0 0.71 9.9 0.0 2.1 1 1 1 2 2 2 0 Transcription factor subunit Med10 of Mediator complex Med30 PF11315.8 gi|21226911|ref|NP_632833.1| - 0.077 13.2 3.8 0.82 9.9 0.1 2.1 2 0 0 2 2 2 0 Mediator complex subunit 30 NPV_P10 PF05531.12 gi|21226911|ref|NP_632833.1| - 0.081 13.4 1.1 8.1 7.0 0.1 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Tektin PF03148.14 gi|21226911|ref|NP_632833.1| - 0.081 11.7 9.0 0.89 8.2 1.3 2.0 2 0 0 2 2 2 0 Tektin family DegS PF05384.11 gi|21226911|ref|NP_632833.1| - 0.084 12.4 5.2 1.8 8.0 1.7 2.2 2 0 0 2 2 2 0 Sensor protein DegS DUF5320 PF17253.2 gi|21226911|ref|NP_632833.1| - 0.098 13.7 3.0 2.1 9.5 0.1 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5320) OmpH PF03938.14 gi|21226911|ref|NP_632833.1| - 0.098 13.0 9.7 0.35 11.2 0.8 2.2 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) GAS PF13851.6 gi|21226911|ref|NP_632833.1| - 0.11 11.9 9.3 0.17 11.2 1.1 2.1 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding Laminin_II PF06009.12 gi|21226911|ref|NP_632833.1| - 0.12 12.3 4.8 2 8.4 0.6 2.2 2 0 0 2 2 2 0 Laminin Domain II Effector_1 PF04518.12 gi|21226911|ref|NP_632833.1| - 0.13 11.3 5.4 1.4 7.9 0.9 2.1 2 0 0 2 2 2 0 Effector from type III secretion system Synaptobrevin PF00957.21 gi|21226911|ref|NP_632833.1| - 0.14 12.0 3.3 0.46 10.3 0.2 2.2 2 0 0 2 2 2 0 Synaptobrevin Sec34 PF04136.15 gi|21226911|ref|NP_632833.1| - 0.15 12.0 2.3 8.8 6.2 0.2 2.1 2 0 0 2 2 2 0 Sec34-like family Ribosomal_L5 PF00281.19 gi|21226911|ref|NP_632833.1| - 0.15 12.4 1.7 1.5 9.2 1.7 2.3 1 1 0 1 1 1 0 Ribosomal protein L5 DUF2730 PF10805.8 gi|21226911|ref|NP_632833.1| - 0.16 12.1 2.0 8.2 6.6 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) TolA_bind_tri PF16331.5 gi|21226911|ref|NP_632833.1| - 0.17 12.0 7.4 1.8 8.7 1.3 2.3 2 0 0 2 2 2 0 TolA binding protein trimerisation DUF812 PF05667.11 gi|21226911|ref|NP_632833.1| - 0.18 10.7 7.8 0.47 9.3 1.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF812) USP8_interact PF08941.10 gi|21226911|ref|NP_632833.1| - 0.2 11.4 3.3 0.43 10.4 0.8 2.0 2 0 0 2 2 2 0 USP8 interacting YabA PF06156.13 gi|21226911|ref|NP_632833.1| - 0.24 12.0 5.1 6 7.6 0.2 2.2 2 0 0 2 2 2 0 Initiation control protein YabA EMP24_GP25L PF01105.24 gi|21226911|ref|NP_632833.1| - 0.24 11.3 3.2 0.73 9.8 0.1 2.0 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD IFT57 PF10498.9 gi|21226911|ref|NP_632833.1| - 0.29 10.1 4.0 4.6 6.1 0.1 2.0 2 0 0 2 2 2 0 Intra-flagellar transport protein 57 Cep57_MT_bd PF06657.13 gi|21226911|ref|NP_632833.1| - 0.29 11.6 3.7 1.2 9.6 0.3 2.4 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Fib_alpha PF08702.10 gi|21226911|ref|NP_632833.1| - 0.38 10.9 3.1 8.3 6.6 0.2 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family APG6_N PF17675.1 gi|21226911|ref|NP_632833.1| - 0.39 11.3 14.6 1.9 9.0 4.1 2.1 1 1 0 2 2 2 0 Apg6 coiled-coil region ADIP PF11559.8 gi|21226911|ref|NP_632833.1| - 0.4 10.8 9.2 0.99 9.5 1.4 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Ax_dynein_light PF10211.9 gi|21226911|ref|NP_632833.1| - 0.4 10.6 6.9 2.3 8.1 0.8 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain YkyA PF10368.9 gi|21226911|ref|NP_632833.1| - 0.42 10.3 6.8 0.76 9.4 0.4 2.2 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein COG2 PF06148.11 gi|21226911|ref|NP_632833.1| - 0.44 10.6 3.7 2.1 8.5 0.5 2.1 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 BST2 PF16716.5 gi|21226911|ref|NP_632833.1| - 0.45 11.1 7.9 3.8 8.2 0.7 2.5 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 GIT_CC PF16559.5 gi|21226911|ref|NP_632833.1| - 0.5 10.3 7.6 2.4 8.1 1.2 2.3 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor CC2-LZ PF16516.5 gi|21226911|ref|NP_632833.1| - 0.55 10.6 9.8 1.5 9.2 3.0 2.2 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Sulfatase_C PF14707.6 gi|21226911|ref|NP_632833.1| - 0.67 10.7 2.6 7.8 7.2 0.4 2.1 2 0 0 2 2 2 0 C-terminal region of aryl-sulfatase LXG PF04740.12 gi|21226911|ref|NP_632833.1| - 0.73 9.5 7.8 3.7 7.2 1.8 2.1 2 0 0 2 2 2 0 LXG domain of WXG superfamily ZapB PF06005.12 gi|21226911|ref|NP_632833.1| - 0.79 10.2 10.8 1.3 9.5 1.5 3.0 2 1 1 3 3 3 0 Cell division protein ZapB CENP-Q PF13094.6 gi|21226911|ref|NP_632833.1| - 0.87 9.8 11.2 26 5.0 11.4 2.0 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit CLZ PF16526.5 gi|21226911|ref|NP_632833.1| - 0.93 9.9 5.9 1.4 9.4 0.7 2.2 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels AAA_13 PF13166.6 gi|21226911|ref|NP_632833.1| - 0.96 8.0 7.7 1.4 7.5 1.9 2.0 2 0 0 2 2 2 0 AAA domain DUF16 PF01519.16 gi|21226911|ref|NP_632833.1| - 0.98 9.9 4.3 15 6.1 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function DUF16 FlaC_arch PF05377.11 gi|21226911|ref|NP_632833.1| - 1 9.8 4.4 12 6.3 0.2 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF4200 PF13863.6 gi|21226911|ref|NP_632833.1| - 1 9.8 12.2 2.9 8.3 1.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) TRPM_tetra PF16519.5 gi|21226911|ref|NP_632833.1| - 1.2 9.3 4.5 2.2 8.5 0.4 2.3 2 1 0 2 2 2 0 Tetramerisation domain of TRPM DUF724 PF05266.14 gi|21226911|ref|NP_632833.1| - 1.2 8.9 7.2 1.8 8.4 2.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF724) EAP30 PF04157.16 gi|21226911|ref|NP_632833.1| - 2 7.7 6.3 9.7 5.4 0.1 2.1 2 0 0 2 2 2 0 EAP30/Vps36 family Nup54 PF13874.6 gi|21226911|ref|NP_632833.1| - 2.2 8.4 9.4 6.4 6.9 1.2 2.3 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 TPR_MLP1_2 PF07926.12 gi|21226911|ref|NP_632833.1| - 2.6 8.1 13.9 1.9 8.6 3.5 2.5 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF5339 PF17274.2 gi|21226911|ref|NP_632833.1| - 3.2 8.7 12.0 0.96 10.4 2.8 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5339) Vir_act_alpha_C PF10400.9 gi|21226911|ref|NP_632833.1| - 4.4 8.1 6.6 8.9 7.1 0.3 2.6 2 1 0 2 2 2 0 Virulence activator alpha C-term DUF4140 PF13600.6 gi|21226911|ref|NP_632833.1| - 5.6 7.5 10.7 1.4e+03 -0.2 10.7 2.6 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) SRP54 PF00448.22 gi|21226912|ref|NP_632834.1| - 1.2e-71 240.4 0.2 2e-71 239.7 0.2 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|21226912|ref|NP_632834.1| - 2.2e-10 40.6 0.5 2.2e-10 40.6 0.5 3.2 4 0 0 4 4 3 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.6 gi|21226912|ref|NP_632834.1| - 0.00023 21.0 0.4 0.00054 19.7 0.4 1.6 1 1 0 1 1 1 1 AAA domain APS_kinase PF01583.20 gi|21226912|ref|NP_632834.1| - 0.0005 20.0 0.0 0.0011 18.9 0.0 1.6 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_17 PF13207.6 gi|21226912|ref|NP_632834.1| - 0.00056 20.3 0.0 0.00056 20.3 0.0 2.5 2 1 1 3 3 3 1 AAA domain Zeta_toxin PF06414.12 gi|21226912|ref|NP_632834.1| - 0.0029 16.9 0.0 0.0061 15.9 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_28 PF13521.6 gi|21226912|ref|NP_632834.1| - 0.0034 17.6 0.9 0.0071 16.6 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|21226912|ref|NP_632834.1| - 0.018 15.2 0.0 0.046 13.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 gi|21226912|ref|NP_632834.1| - 0.023 14.3 0.1 0.061 12.9 0.1 1.7 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 gi|21226912|ref|NP_632834.1| - 0.027 14.8 0.2 0.12 12.6 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|21226912|ref|NP_632834.1| - 0.033 14.6 0.2 0.14 12.5 0.0 2.1 2 1 0 2 2 2 0 AAA ATPase domain AAA_7 PF12775.7 gi|21226912|ref|NP_632834.1| - 0.065 12.7 0.0 0.13 11.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region Thymidylate_kin PF02223.17 gi|21226912|ref|NP_632834.1| - 0.066 12.9 4.0 0.29 10.8 0.1 3.2 3 0 0 3 3 3 0 Thymidylate kinase AAA PF00004.29 gi|21226912|ref|NP_632834.1| - 0.07 13.6 0.1 0.4 11.1 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 gi|21226912|ref|NP_632834.1| - 0.11 11.4 1.3 0.13 11.3 0.1 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 gi|21226912|ref|NP_632834.1| - 0.2 11.7 3.7 0.28 11.3 0.6 2.6 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 gi|21226912|ref|NP_632834.1| - 0.93 10.0 13.2 8 6.9 0.1 2.5 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 gi|21226912|ref|NP_632834.1| - 2.1 8.3 6.4 0.18 11.7 1.1 2.1 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B MAS20 PF02064.15 gi|21226912|ref|NP_632834.1| - 5.2 7.2 9.9 0.37 10.9 4.2 1.9 2 0 0 2 2 2 0 MAS20 protein import receptor PspC PF04024.12 gi|21226913|ref|NP_632835.1| - 2.1e-26 91.5 1.6 2.3e-26 91.3 1.6 1.0 1 0 0 1 1 1 1 PspC domain NqrM PF04400.13 gi|21226913|ref|NP_632835.1| - 0.088 12.6 0.1 0.13 12.0 0.1 1.3 1 0 0 1 1 1 0 (Na+)-NQR maturation NqrM DUF1722 PF08349.11 gi|21226915|ref|NP_632837.1| - 3.2e-37 127.4 0.0 7.4e-37 126.2 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1722) DUF523 PF04463.12 gi|21226915|ref|NP_632837.1| - 7.8e-33 113.4 0.0 1.2e-32 112.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF523) AhpC-TSA PF00578.21 gi|21226916|ref|NP_632838.1| - 2.8e-33 114.5 0.1 3.8e-33 114.0 0.1 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|21226916|ref|NP_632838.1| - 8.3e-15 54.8 0.0 1.1e-14 54.4 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|21226916|ref|NP_632838.1| - 1.4e-14 53.6 1.1 1.8e-13 50.1 0.5 2.3 2 0 0 2 2 2 1 C-terminal domain of 1-Cys peroxiredoxin P_C10 PF14974.6 gi|21226916|ref|NP_632838.1| - 0.0084 16.2 0.1 0.019 15.0 0.1 1.7 1 0 0 1 1 1 1 Protein C10 DASH_Spc19 PF08287.11 gi|21226917|ref|NP_632839.1| - 0.0056 16.6 0.0 0.0062 16.4 0.0 1.1 1 0 0 1 1 1 1 Spc19 SlyX PF04102.12 gi|21226917|ref|NP_632839.1| - 0.019 15.6 0.1 0.026 15.1 0.1 1.2 1 0 0 1 1 1 0 SlyX DDE_Tnp_IS66 PF03050.14 gi|21226918|ref|NP_632840.1| - 1.3e-72 244.6 0.0 1.5e-72 244.4 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21226918|ref|NP_632840.1| - 4.2e-09 36.6 4.4 1.3e-08 35.1 4.4 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21226918|ref|NP_632840.1| - 7.7e-06 26.2 1.4 0.12 12.6 0.1 3.0 2 1 0 3 3 3 2 DDE domain DZR PF12773.7 gi|21226918|ref|NP_632840.1| - 0.041 13.9 0.6 0.2 11.7 0.3 2.4 2 1 0 2 2 2 0 Double zinc ribbon zf-RING_5 PF14634.6 gi|21226918|ref|NP_632840.1| - 0.12 12.4 5.5 0.98 9.4 0.0 3.1 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_2 PF13240.6 gi|21226918|ref|NP_632840.1| - 0.12 12.1 6.1 2.6 7.9 0.2 2.8 2 0 0 2 2 2 0 zinc-ribbon domain Thioredoxin_2 PF13098.6 gi|21226918|ref|NP_632840.1| - 0.27 11.7 1.5 0.47 10.9 0.3 2.0 2 0 0 2 2 2 0 Thioredoxin-like domain zf-ribbon_3 PF13248.6 gi|21226918|ref|NP_632840.1| - 0.62 9.5 6.3 1 8.9 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21226918|ref|NP_632840.1| - 0.89 9.7 3.7 5.5 7.2 2.3 2.8 2 1 0 2 2 1 0 Zinc ribbon domain Lar_restr_allev PF14354.6 gi|21226918|ref|NP_632840.1| - 2 8.9 6.5 0.61 10.5 0.3 2.9 3 0 0 3 3 3 0 Restriction alleviation protein Lar Mut7-C PF01927.16 gi|21226918|ref|NP_632840.1| - 2.8 8.0 4.9 0.88 9.7 1.8 1.7 2 0 0 2 2 2 0 Mut7-C RNAse domain zinc_ribbon_15 PF17032.5 gi|21226918|ref|NP_632840.1| - 2.8 8.7 7.0 0.37 11.6 1.6 2.2 2 1 0 2 2 2 0 zinc-ribbon family YhfH PF14149.6 gi|21226918|ref|NP_632840.1| - 8.8 6.4 8.7 42 4.2 0.2 3.5 3 0 0 3 3 3 0 YhfH-like protein P5CR_dimer PF14748.6 gi|21226919|ref|NP_632841.1| - 3e-39 133.4 2.9 3e-39 133.4 2.9 1.8 2 0 0 2 2 2 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 gi|21226919|ref|NP_632841.1| - 3.2e-21 75.7 1.4 8.1e-21 74.4 0.5 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|21226919|ref|NP_632841.1| - 5.9e-06 26.5 0.5 1.4e-05 25.3 0.5 1.8 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|21226919|ref|NP_632841.1| - 3.5e-05 23.8 3.2 0.00025 21.1 3.2 2.1 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Sacchrp_dh_C PF16653.5 gi|21226919|ref|NP_632841.1| - 0.0061 16.7 1.5 0.024 14.8 0.0 2.2 2 0 0 2 2 2 1 Saccharopine dehydrogenase C-terminal domain Rossmann-like PF10727.9 gi|21226919|ref|NP_632841.1| - 0.019 14.8 0.2 0.068 13.0 0.2 1.9 1 1 0 1 1 1 0 Rossmann-like domain PDH PF02153.17 gi|21226919|ref|NP_632841.1| - 0.022 13.8 0.0 0.042 12.8 0.0 1.4 2 0 0 2 2 2 0 Prephenate dehydrogenase DUF1547 PF07577.11 gi|21226919|ref|NP_632841.1| - 0.04 14.3 0.0 0.079 13.3 0.0 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1547) DapB_N PF01113.20 gi|21226919|ref|NP_632841.1| - 0.085 13.0 0.1 0.24 11.5 0.1 1.8 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ApbA PF02558.16 gi|21226919|ref|NP_632841.1| - 0.58 9.8 3.0 2 8.0 3.0 1.9 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA AA_kinase PF00696.28 gi|21226920|ref|NP_632842.1| - 1.1e-40 139.8 0.1 1.4e-40 139.4 0.1 1.2 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 gi|21226920|ref|NP_632842.1| - 4.2e-18 65.1 0.6 4.2e-18 65.1 0.6 1.8 2 0 0 2 2 2 1 PUA domain Aldedh PF00171.22 gi|21226921|ref|NP_632843.1| - 6.9e-16 57.8 0.1 5.8e-12 44.9 0.0 2.2 2 0 0 2 2 2 2 Aldehyde dehydrogenase family FlgN PF05130.12 gi|21226921|ref|NP_632843.1| - 0.051 14.1 1.2 0.097 13.2 1.2 1.4 1 0 0 1 1 1 0 FlgN protein DUF356 PF04009.12 gi|21226922|ref|NP_632844.1| - 3.9e-43 146.0 0.1 4.7e-43 145.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF356) Toprim_4 PF13662.6 gi|21226923|ref|NP_632845.1| - 9.8e-07 29.2 0.0 4.7e-06 27.0 0.0 2.0 1 1 0 1 1 1 1 Toprim domain Toprim PF01751.22 gi|21226923|ref|NP_632845.1| - 2.5e-05 24.4 0.1 0.00067 19.8 0.1 2.4 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|21226923|ref|NP_632845.1| - 0.014 15.8 0.0 0.036 14.5 0.0 1.7 1 1 0 1 1 1 0 Toprim-like HAD_SAK_2 PF18143.1 gi|21226923|ref|NP_632845.1| - 0.11 12.8 0.0 0.15 12.3 0.0 1.3 1 1 0 1 1 1 0 HAD domain in Swiss Army Knife RNA repair proteins DUF167 PF02594.16 gi|21226924|ref|NP_632846.1| - 5.5e-20 71.3 0.0 6.8e-20 71.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Amidohydro_1 PF01979.20 gi|21226925|ref|NP_632847.1| - 1.1e-23 84.1 0.1 1.1e-22 80.8 0.1 1.9 1 1 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.22 gi|21226925|ref|NP_632847.1| - 2e-08 33.9 0.0 2.9e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.11 gi|21226925|ref|NP_632847.1| - 2.3e-05 24.1 0.0 0.00031 20.4 0.0 2.2 2 1 0 2 2 2 1 Amidohydrolase family Peripla_BP_2 PF01497.18 gi|21226925|ref|NP_632847.1| - 0.026 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein CRM1_repeat PF18777.1 gi|21226925|ref|NP_632847.1| - 0.071 12.6 0.2 0.14 11.7 0.2 1.4 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat Usp PF00582.26 gi|21226926|ref|NP_632848.1| - 4.9e-38 130.8 0.1 5.6e-38 130.6 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family NTP_transf_7 PF07984.12 gi|21226926|ref|NP_632848.1| - 0.11 11.7 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Nucleotidyltransferase CBS PF00571.28 gi|21226927|ref|NP_632849.1| - 5.3e-45 151.7 12.2 7.2e-15 55.2 0.1 4.2 4 0 0 4 4 4 4 CBS domain GAF PF01590.26 gi|21226927|ref|NP_632849.1| - 0.0041 17.8 0.1 0.32 11.6 0.0 2.6 1 1 1 2 2 2 1 GAF domain Peptidase_S55 PF05580.12 gi|21226927|ref|NP_632849.1| - 0.019 14.9 0.2 1.4 8.8 0.0 2.3 2 0 0 2 2 2 0 SpoIVB peptidase S55 H_kinase_N PF12282.8 gi|21226927|ref|NP_632849.1| - 0.034 14.1 0.6 8.6 6.3 0.1 2.4 2 0 0 2 2 2 0 Signal transduction histidine kinase CAAD PF14159.6 gi|21226927|ref|NP_632849.1| - 0.051 13.4 0.4 1.7 8.5 0.2 3.0 3 0 0 3 3 3 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase RibD_C PF01872.17 gi|21226928|ref|NP_632850.1| - 1.1e-56 191.8 0.0 1.3e-56 191.6 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain zf-HC2 PF13490.6 gi|21226928|ref|NP_632850.1| - 0.097 12.9 0.0 4.6 7.6 0.1 2.5 2 0 0 2 2 2 0 Putative zinc-finger CxxCxxCC PF03692.15 gi|21226929|ref|NP_632851.1| - 8e-12 45.7 2.1 2.2e-11 44.3 2.1 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain CRCB PF02537.15 gi|21226930|ref|NP_632852.1| - 3.3e-22 78.6 6.0 4e-22 78.4 6.0 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) CRCB PF02537.15 gi|21226931|ref|NP_632853.1| - 8.8e-18 64.4 10.3 1.1e-17 64.1 10.3 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) Phage_holin_3_6 PF07332.11 gi|21226931|ref|NP_632853.1| - 7.3 6.7 7.6 0.49 10.5 1.4 1.9 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III MoeA_N PF03453.17 gi|21226932|ref|NP_632854.1| - 1.5e-42 145.0 0.1 2.6e-42 144.2 0.1 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|21226932|ref|NP_632854.1| - 3.4e-25 88.4 0.0 5.9e-25 87.6 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|21226932|ref|NP_632854.1| - 4.6e-14 52.4 2.6 3.7e-13 49.4 0.0 2.8 3 0 0 3 3 3 1 MoeA C-terminal region (domain IV) MutL PF13941.6 gi|21226932|ref|NP_632854.1| - 0.085 11.4 0.0 0.13 10.8 0.0 1.2 1 0 0 1 1 1 0 MutL protein ThiS PF02597.20 gi|21226933|ref|NP_632855.1| - 5.4e-20 71.8 0.1 6.4e-20 71.6 0.1 1.1 1 0 0 1 1 1 1 ThiS family Colicin_Pyocin PF01320.18 gi|21226933|ref|NP_632855.1| - 0.02 15.0 0.0 0.025 14.7 0.0 1.2 1 0 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein PMT_2 PF13231.6 gi|21226934|ref|NP_632856.1| - 3.3e-12 46.9 8.2 3.3e-12 46.9 8.2 4.0 4 1 1 5 5 5 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.18 gi|21226934|ref|NP_632856.1| - 3.9e-10 39.7 12.4 3.9e-10 39.7 12.4 2.3 1 1 1 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase CitMHS PF03600.16 gi|21226934|ref|NP_632856.1| - 0.038 13.2 3.8 0.072 12.3 3.3 1.8 1 1 0 1 1 1 0 Citrate transporter CBS PF00571.28 gi|21226935|ref|NP_632857.1| - 2e-27 95.4 3.0 9.5e-13 48.4 0.2 2.1 2 0 0 2 2 2 2 CBS domain Na_H_Exchanger PF00999.21 gi|21226936|ref|NP_632858.1| - 5.2e-52 176.9 51.3 5.7e-52 176.8 51.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family E1-E2_ATPase PF00122.20 gi|21226937|ref|NP_632859.1| - 1.4e-55 187.6 0.2 1.4e-55 187.6 0.2 3.5 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|21226937|ref|NP_632859.1| - 1.3e-47 161.9 10.6 1.3e-47 161.9 10.6 2.8 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|21226937|ref|NP_632859.1| - 1.4e-25 90.8 1.1 3.4e-25 89.6 0.2 2.2 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|21226937|ref|NP_632859.1| - 1.3e-22 79.6 0.0 3.7e-22 78.2 0.0 1.8 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|21226937|ref|NP_632859.1| - 6.9e-20 70.5 0.0 1.6e-19 69.4 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|21226937|ref|NP_632859.1| - 2.1e-05 24.4 1.4 0.0055 16.5 1.0 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|21226937|ref|NP_632859.1| - 7.9e-05 23.1 0.0 0.00019 21.9 0.0 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Radical_SAM PF04055.21 gi|21226937|ref|NP_632859.1| - 0.1 12.9 0.2 0.9 9.9 0.1 2.3 1 1 0 1 1 1 0 Radical SAM superfamily Amino_oxidase PF01593.24 gi|21226938|ref|NP_632860.1| - 6.7e-32 111.3 0.0 8.2e-32 111.1 0.0 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DAO PF01266.24 gi|21226938|ref|NP_632860.1| - 8.5e-16 58.5 0.0 4.1e-08 33.2 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|21226938|ref|NP_632860.1| - 2.5e-10 40.4 0.2 7.9e-10 38.8 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|21226938|ref|NP_632860.1| - 9.8e-07 28.2 0.0 0.00029 20.0 0.0 2.6 3 0 0 3 3 3 2 FAD binding domain HI0933_like PF03486.14 gi|21226938|ref|NP_632860.1| - 0.00059 18.7 0.1 0.51 9.0 0.0 2.2 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_2 PF07992.14 gi|21226938|ref|NP_632860.1| - 0.0041 16.4 0.0 0.03 13.5 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|21226938|ref|NP_632860.1| - 0.0046 16.2 0.9 0.0082 15.4 0.1 1.8 2 0 0 2 2 2 1 Thi4 family GIDA PF01134.22 gi|21226938|ref|NP_632860.1| - 0.033 13.3 0.0 0.14 11.2 0.0 1.8 2 0 0 2 2 2 0 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|21226938|ref|NP_632860.1| - 0.036 14.6 0.2 17 6.0 0.0 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|21226938|ref|NP_632860.1| - 0.081 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|21226938|ref|NP_632860.1| - 0.18 11.8 0.1 0.81 9.7 0.0 2.1 3 0 0 3 3 3 0 FAD-NAD(P)-binding DUF3303 PF11746.8 gi|21226939|ref|NP_632861.1| - 1.4e-06 28.4 0.0 1.8e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) tify PF06200.14 gi|21226939|ref|NP_632861.1| - 0.18 11.1 0.2 0.3 10.5 0.2 1.2 1 0 0 1 1 1 0 tify domain Aldedh PF00171.22 gi|21226940|ref|NP_632862.1| - 6.7e-165 549.1 0.0 8.1e-165 548.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|21226940|ref|NP_632862.1| - 0.016 14.3 0.0 0.032 13.3 0.0 1.5 2 0 0 2 2 2 0 Acyl-CoA reductase (LuxC) DUF2298 PF10060.9 gi|21226941|ref|NP_632863.1| - 2.1e-109 366.5 40.1 2.8e-109 366.1 40.1 1.1 1 0 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) LPG_synthase_TM PF03706.13 gi|21226942|ref|NP_632864.1| - 7e-46 157.1 19.2 9.2e-46 156.7 19.2 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Glycos_transf_2 PF00535.26 gi|21226942|ref|NP_632864.1| - 0.087 12.6 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 HTH_5 PF01022.20 gi|21226943|ref|NP_632865.1| - 5.6e-16 58.1 0.8 1e-15 57.3 0.8 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21226943|ref|NP_632865.1| - 1.2e-13 50.9 0.6 2.6e-13 49.8 0.6 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|21226943|ref|NP_632865.1| - 0.004 17.0 0.6 0.0079 16.1 0.2 1.8 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|21226943|ref|NP_632865.1| - 0.0046 17.4 0.0 0.012 16.1 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain ArsR PF09824.9 gi|21226943|ref|NP_632865.1| - 0.0051 16.4 0.0 0.007 16.0 0.0 1.3 1 0 0 1 1 1 1 ArsR transcriptional regulator DUF2513 PF10711.9 gi|21226943|ref|NP_632865.1| - 0.0081 16.4 0.1 0.011 16.0 0.1 1.4 1 1 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_45 PF14947.6 gi|21226943|ref|NP_632865.1| - 0.015 15.3 0.0 0.026 14.5 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DUF505 PF04458.12 gi|21226943|ref|NP_632865.1| - 0.045 12.1 0.2 0.094 11.1 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF505) HTH_24 PF13412.6 gi|21226943|ref|NP_632865.1| - 0.065 12.8 0.1 0.87 9.2 0.1 2.3 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding PadR PF03551.14 gi|21226943|ref|NP_632865.1| - 0.11 12.5 0.1 0.26 11.3 0.1 1.7 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|21226943|ref|NP_632865.1| - 0.12 12.6 0.1 0.18 12.0 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain NikR_C PF08753.11 gi|21226944|ref|NP_632866.1| - 1.9e-33 114.4 2.8 2.8e-33 113.9 2.8 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|21226944|ref|NP_632866.1| - 4.1e-09 36.1 0.1 4.1e-09 36.1 0.1 1.9 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|21226944|ref|NP_632866.1| - 0.001 19.2 0.0 0.0061 16.7 0.0 2.1 2 0 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system AMP-binding PF00501.28 gi|21226945|ref|NP_632867.1| - 2.9e-17 62.4 0.0 4e-17 61.9 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme SIS_2 PF13580.6 gi|21226945|ref|NP_632867.1| - 0.0067 16.5 0.0 0.019 15.0 0.0 1.8 1 1 0 1 1 1 1 SIS domain LIM PF00412.22 gi|21226946|ref|NP_632868.1| - 0.0013 18.9 1.4 0.0022 18.2 1.4 1.4 1 0 0 1 1 1 1 LIM domain TrmB PF01978.19 gi|21226946|ref|NP_632868.1| - 0.0062 16.4 0.0 0.011 15.6 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FaeA PF04703.12 gi|21226946|ref|NP_632868.1| - 0.066 13.6 0.0 0.1 13.0 0.0 1.3 1 0 0 1 1 1 0 FaeA-like protein Sigma70_ECF PF07638.11 gi|21226946|ref|NP_632868.1| - 0.094 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 ECF sigma factor HTH_23 PF13384.6 gi|21226946|ref|NP_632868.1| - 0.1 12.4 0.4 0.7 9.8 0.0 2.4 3 0 0 3 3 3 0 Homeodomain-like domain TF_Zn_Ribbon PF08271.12 gi|21226946|ref|NP_632868.1| - 2.1 8.0 7.8 1.6 8.3 0.7 2.3 1 1 1 2 2 2 0 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|21226946|ref|NP_632868.1| - 2.1 8.3 5.6 1.4 8.9 3.8 1.6 2 0 0 2 2 2 0 Putative transposase DNA-binding domain CMD PF02627.20 gi|21226947|ref|NP_632869.1| - 1.3e-18 66.8 0.0 1.7e-18 66.5 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family AlaE PF06610.13 gi|21226947|ref|NP_632869.1| - 0.055 13.5 0.4 0.29 11.2 0.2 1.9 1 1 1 2 2 2 0 L-alanine exporter TrmB PF01978.19 gi|21226948|ref|NP_632870.1| - 0.00035 20.4 0.0 1.1 9.2 0.0 2.2 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB LIM PF00412.22 gi|21226948|ref|NP_632870.1| - 0.00079 19.6 1.2 0.0015 18.7 1.2 1.5 1 0 0 1 1 1 1 LIM domain HTH_IclR PF09339.10 gi|21226948|ref|NP_632870.1| - 0.0075 16.0 0.0 0.022 14.6 0.0 1.9 1 1 0 1 1 1 1 IclR helix-turn-helix domain Penicillinase_R PF03965.16 gi|21226948|ref|NP_632870.1| - 0.012 15.9 0.0 0.042 14.2 0.0 1.8 2 0 0 2 2 2 0 Penicillinase repressor HTH_9 PF08221.11 gi|21226948|ref|NP_632870.1| - 0.018 15.2 0.0 0.046 13.8 0.0 1.6 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain PadR PF03551.14 gi|21226948|ref|NP_632870.1| - 0.019 14.9 0.1 0.041 13.8 0.0 1.6 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family VATC PF18716.1 gi|21226948|ref|NP_632870.1| - 0.053 13.4 0.7 0.099 12.5 0.7 1.4 1 0 0 1 1 1 0 Vms1-associating treble clef domain Prot_inhib_II PF02428.15 gi|21226948|ref|NP_632870.1| - 0.06 13.8 0.4 0.11 13.0 0.4 1.4 1 0 0 1 1 1 0 Potato type II proteinase inhibitor family zf-FCS PF06467.14 gi|21226948|ref|NP_632870.1| - 0.062 13.3 0.2 0.15 12.0 0.2 1.6 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif NMD3 PF04981.13 gi|21226948|ref|NP_632870.1| - 0.089 12.2 0.3 0.14 11.6 0.3 1.3 1 0 0 1 1 1 0 NMD3 family HTH_20 PF12840.7 gi|21226948|ref|NP_632870.1| - 0.18 11.9 0.0 1.9 8.6 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Pyr_excise PF03013.14 gi|21226949|ref|NP_632871.1| - 4.7e-13 49.2 0.9 8.3e-13 48.5 0.9 1.4 1 1 0 1 1 1 1 Pyrimidine dimer DNA glycosylase PPC PF04151.15 gi|21226950|ref|NP_632872.1| - 0.02 16.0 0.1 0.8 10.8 0.1 2.5 2 0 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain DUF1129 PF06570.11 gi|21226950|ref|NP_632872.1| - 0.045 13.2 0.5 0.071 12.6 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) SLAC1 PF03595.17 gi|21226950|ref|NP_632872.1| - 0.073 12.3 7.5 0.15 11.3 7.5 1.5 1 0 0 1 1 1 0 Voltage-dependent anion channel AhpC-TSA PF00578.21 gi|21226951|ref|NP_632873.1| - 3.1e-37 127.3 0.0 3.6e-37 127.0 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|21226951|ref|NP_632873.1| - 4.6e-19 68.6 0.0 5.6e-19 68.3 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|21226951|ref|NP_632873.1| - 7.7e-05 22.6 0.0 0.00012 22.0 0.0 1.3 1 1 0 1 1 1 1 SCO1/SenC AhpC-TSA_2 PF13911.6 gi|21226951|ref|NP_632873.1| - 0.024 14.8 0.0 0.032 14.3 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 gi|21226951|ref|NP_632873.1| - 0.044 13.3 0.0 0.049 13.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) DUF378 PF04070.12 gi|21226952|ref|NP_632874.1| - 1.3e-25 89.0 10.4 1.5e-25 88.8 10.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF378) TssN PF17555.2 gi|21226952|ref|NP_632874.1| - 0.21 11.0 1.7 0.24 10.8 1.7 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF751 PF05421.11 gi|21226952|ref|NP_632874.1| - 0.22 12.3 3.4 2.9 8.7 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF751) PsbT PF01405.17 gi|21226952|ref|NP_632874.1| - 2.3 8.1 7.3 0.26 11.1 1.9 2.1 2 0 0 2 2 2 0 Photosystem II reaction centre T protein DNA_photolyase PF00875.18 gi|21226954|ref|NP_632876.1| - 1.5e-31 109.7 0.0 2.9e-31 108.7 0.0 1.5 1 0 0 1 1 1 1 DNA photolyase FAD_binding_7 PF03441.14 gi|21226954|ref|NP_632876.1| - 0.0032 17.0 0.0 0.0058 16.1 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase Lactamase_B_2 PF12706.7 gi|21226955|ref|NP_632877.1| - 3.7e-30 104.9 0.2 4.9e-30 104.6 0.2 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|21226955|ref|NP_632877.1| - 6.8e-21 75.2 0.5 1.1e-20 74.5 0.5 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|21226955|ref|NP_632877.1| - 2.6e-08 33.9 0.8 5.5e-08 32.9 0.8 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain AAA PF00004.29 gi|21226956|ref|NP_632878.1| - 5e-38 130.5 0.2 3.7e-37 127.7 0.0 2.3 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|21226956|ref|NP_632878.1| - 1e-11 44.4 0.3 3.1e-11 42.9 0.3 1.8 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 gi|21226956|ref|NP_632878.1| - 6.3e-06 26.2 0.0 3.2e-05 24.0 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|21226956|ref|NP_632878.1| - 7.9e-06 26.4 0.0 3.6e-05 24.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|21226956|ref|NP_632878.1| - 5.8e-05 23.5 0.1 0.0015 18.9 0.1 2.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|21226956|ref|NP_632878.1| - 0.00014 22.1 0.5 0.0094 16.2 0.0 3.1 3 1 1 4 4 3 1 AAA domain AAA_2 PF07724.14 gi|21226956|ref|NP_632878.1| - 0.00018 21.6 1.3 0.00076 19.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|21226956|ref|NP_632878.1| - 0.00021 21.1 0.1 0.00041 20.1 0.1 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 gi|21226956|ref|NP_632878.1| - 0.00029 21.0 0.0 0.00061 20.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|21226956|ref|NP_632878.1| - 0.00063 20.2 0.9 0.073 13.5 0.0 2.8 2 1 0 2 2 2 1 AAA domain AAA_7 PF12775.7 gi|21226956|ref|NP_632878.1| - 0.00074 19.1 0.0 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region TIP49 PF06068.13 gi|21226956|ref|NP_632878.1| - 0.00086 18.6 0.3 0.0045 16.3 0.0 2.3 2 1 1 3 3 3 1 TIP49 P-loop domain DUF815 PF05673.13 gi|21226956|ref|NP_632878.1| - 0.0012 18.1 0.1 0.0022 17.2 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_28 PF13521.6 gi|21226956|ref|NP_632878.1| - 0.0014 18.9 0.0 0.0038 17.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|21226956|ref|NP_632878.1| - 0.004 16.6 0.0 0.011 15.1 0.0 1.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_11 PF13086.6 gi|21226956|ref|NP_632878.1| - 0.0046 16.8 0.3 0.031 14.1 0.1 2.0 1 1 1 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|21226956|ref|NP_632878.1| - 0.0074 15.9 1.9 0.13 11.9 0.0 2.7 2 1 1 3 3 3 1 AAA domain IstB_IS21 PF01695.17 gi|21226956|ref|NP_632878.1| - 0.0081 15.9 0.0 0.021 14.6 0.0 1.7 1 1 0 1 1 1 1 IstB-like ATP binding protein SKI PF01202.22 gi|21226956|ref|NP_632878.1| - 0.011 15.9 0.0 0.027 14.6 0.0 1.7 1 0 0 1 1 1 0 Shikimate kinase ResIII PF04851.15 gi|21226956|ref|NP_632878.1| - 0.012 15.6 0.0 0.029 14.4 0.0 1.7 2 0 0 2 2 1 0 Type III restriction enzyme, res subunit Cytidylate_kin PF02224.18 gi|21226956|ref|NP_632878.1| - 0.012 15.3 0.2 0.054 13.2 0.0 2.1 2 0 0 2 2 2 0 Cytidylate kinase AAA_14 PF13173.6 gi|21226956|ref|NP_632878.1| - 0.029 14.4 0.1 0.15 12.1 0.0 2.2 2 2 0 2 2 2 0 AAA domain CPT PF07931.12 gi|21226956|ref|NP_632878.1| - 0.079 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein MMR_HSR1 PF01926.23 gi|21226956|ref|NP_632878.1| - 0.098 12.7 0.1 0.42 10.7 0.0 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|21226956|ref|NP_632878.1| - 0.099 12.4 0.0 0.24 11.1 0.0 1.8 1 1 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 gi|21226956|ref|NP_632878.1| - 0.12 12.5 0.0 0.28 11.3 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|21226956|ref|NP_632878.1| - 0.13 12.6 0.0 0.26 11.7 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 gi|21226956|ref|NP_632878.1| - 0.14 11.8 0.0 0.38 10.5 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_tran PF00005.27 gi|21226956|ref|NP_632878.1| - 0.17 12.4 0.1 0.63 10.6 0.0 2.1 2 0 0 2 2 2 0 ABC transporter AAA_23 PF13476.6 gi|21226956|ref|NP_632878.1| - 7.3 7.0 9.6 11 6.5 0.0 2.8 2 1 1 3 3 3 0 AAA domain SAICAR_synt PF01259.18 gi|21226957|ref|NP_632879.1| - 3.2e-60 203.9 0.1 3.8e-60 203.6 0.1 1.1 1 0 0 1 1 1 1 SAICAR synthetase Nre_N PF04894.12 gi|21226958|ref|NP_632880.1| - 5e-104 347.9 0.0 6e-104 347.6 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|21226958|ref|NP_632880.1| - 8.2e-40 135.1 0.0 1.3e-39 134.5 0.0 1.3 1 0 0 1 1 1 1 Archaeal Nre, C-terminal Sigma70_r4 PF04545.16 gi|21226959|ref|NP_632881.1| - 0.00094 18.6 0.0 0.0022 17.5 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|21226959|ref|NP_632881.1| - 0.0013 18.8 0.0 0.0022 18.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix Sigma70_r4_2 PF08281.12 gi|21226959|ref|NP_632881.1| - 0.0035 17.0 0.0 0.011 15.4 0.0 1.8 1 1 1 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|21226959|ref|NP_632881.1| - 0.0052 16.3 0.0 0.0095 15.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_40 PF14493.6 gi|21226959|ref|NP_632881.1| - 0.017 15.6 0.0 0.022 15.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|21226959|ref|NP_632881.1| - 0.041 13.8 0.0 0.075 12.9 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|21226959|ref|NP_632881.1| - 0.072 13.1 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_26 PF13443.6 gi|21226959|ref|NP_632881.1| - 0.11 12.9 0.0 0.17 12.3 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain SUI1 PF01253.22 gi|21226960|ref|NP_632882.1| - 1e-20 74.0 0.1 1.3e-20 73.7 0.1 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.15 gi|21226960|ref|NP_632882.1| - 0.016 15.0 0.7 0.021 14.5 0.7 1.2 1 0 0 1 1 1 0 DTW domain Img2 PF05046.14 gi|21226960|ref|NP_632882.1| - 0.032 14.5 0.2 0.079 13.3 0.2 1.7 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) TrmB PF01978.19 gi|21226961|ref|NP_632883.1| - 6.6e-06 25.9 0.5 8.2e-06 25.6 0.5 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|21226961|ref|NP_632883.1| - 8.9e-06 25.6 0.9 1e-05 25.4 0.9 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix MarR PF01047.22 gi|21226961|ref|NP_632883.1| - 0.00014 21.7 0.2 0.00019 21.3 0.2 1.2 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|21226961|ref|NP_632883.1| - 0.00032 20.5 0.3 0.00036 20.4 0.3 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit DUF4364 PF14277.6 gi|21226961|ref|NP_632883.1| - 0.0028 17.4 0.4 0.0037 17.0 0.3 1.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_34 PF13601.6 gi|21226961|ref|NP_632883.1| - 0.0036 17.4 0.2 0.0054 16.9 0.2 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|21226961|ref|NP_632883.1| - 0.0044 17.2 0.6 0.0097 16.1 0.2 1.7 1 1 1 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.7 gi|21226961|ref|NP_632883.1| - 0.0054 16.8 0.0 0.0073 16.4 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain DDE_Tnp_2 PF04693.12 gi|21226961|ref|NP_632883.1| - 0.012 14.9 0.1 0.013 14.7 0.1 1.1 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 HTH_27 PF13463.6 gi|21226961|ref|NP_632883.1| - 0.016 15.7 0.1 0.021 15.3 0.1 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain TBPIP PF07106.13 gi|21226961|ref|NP_632883.1| - 0.018 15.0 2.1 0.37 10.8 0.7 2.3 1 1 1 2 2 2 0 TBPIP/Hop2 winged helix domain DUF2089 PF09862.9 gi|21226961|ref|NP_632883.1| - 0.024 14.7 0.3 0.026 14.5 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) Penicillinase_R PF03965.16 gi|21226961|ref|NP_632883.1| - 0.025 14.9 0.2 0.034 14.5 0.2 1.2 1 0 0 1 1 1 0 Penicillinase repressor DUF4423 PF14394.6 gi|21226961|ref|NP_632883.1| - 0.026 14.2 0.5 0.029 14.1 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_DeoR PF08220.12 gi|21226961|ref|NP_632883.1| - 0.027 14.2 0.1 0.048 13.4 0.1 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HxlR PF01638.17 gi|21226961|ref|NP_632883.1| - 0.032 14.1 0.7 0.088 12.7 0.7 1.8 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_24 PF13412.6 gi|21226961|ref|NP_632883.1| - 0.035 13.7 0.2 0.048 13.2 0.2 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 gi|21226961|ref|NP_632883.1| - 0.045 13.8 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix HTH_5 PF01022.20 gi|21226961|ref|NP_632883.1| - 0.047 13.6 0.3 0.06 13.2 0.3 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|21226961|ref|NP_632883.1| - 0.074 13.0 0.4 0.16 11.9 0.4 1.7 1 1 0 1 1 1 0 HTH domain HTH_Crp_2 PF13545.6 gi|21226961|ref|NP_632883.1| - 0.092 12.7 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain AIRS PF00586.24 gi|21226962|ref|NP_632884.1| - 3.2e-48 162.3 1.7 7.6e-25 87.4 0.0 3.6 4 0 0 4 4 4 2 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|21226962|ref|NP_632884.1| - 5.6e-45 153.3 7.7 2.9e-32 112.0 0.3 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain Glyco_hydro_57 PF03065.15 gi|21226963|ref|NP_632885.1| - 1.6e-48 165.6 0.0 2.4e-48 165.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Glyco_hydro_57 PF03065.15 gi|21226964|ref|NP_632886.1| - 1.1e-71 241.8 0.1 1.5e-71 241.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.21 gi|21226964|ref|NP_632886.1| - 3.4e-05 23.7 0.0 5.6e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase V4R PF02830.18 gi|21226965|ref|NP_632887.1| - 3.1e-19 68.7 0.0 7.4e-19 67.5 0.0 1.7 1 0 0 1 1 1 1 V4R domain Glyco_hydro_15 PF00723.21 gi|21226966|ref|NP_632888.1| - 1.3e-13 50.5 0.0 7e-07 28.4 0.2 3.4 2 1 1 3 3 3 3 Glycosyl hydrolases family 15 Glucodextran_N PF09137.11 gi|21226966|ref|NP_632888.1| - 0.00074 19.2 0.0 0.0011 18.6 0.0 1.1 1 0 0 1 1 1 1 Glucodextranase, domain N tRNA-synt_2b PF00587.25 gi|21226967|ref|NP_632889.1| - 1.9e-31 109.4 0.0 5.6e-31 107.9 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|21226967|ref|NP_632889.1| - 3.1e-28 98.2 2.2 5.2e-28 97.4 2.2 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain MIP-T3_C PF17749.1 gi|21226967|ref|NP_632889.1| - 0.048 13.6 1.5 0.081 12.9 1.5 1.3 1 0 0 1 1 1 0 Microtubule-binding protein MIP-T3 C-terminal region Laminin_I PF06008.14 gi|21226967|ref|NP_632889.1| - 0.054 13.2 0.1 0.087 12.5 0.1 1.3 1 0 0 1 1 1 0 Laminin Domain I DUF5082 PF16888.5 gi|21226967|ref|NP_632889.1| - 0.073 13.4 1.7 0.11 12.7 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) GldM_N PF12081.8 gi|21226967|ref|NP_632889.1| - 0.12 12.4 0.1 0.27 11.3 0.1 1.5 1 0 0 1 1 1 0 GldM N-terminal domain DivIC PF04977.15 gi|21226967|ref|NP_632889.1| - 0.61 9.9 3.9 2.9 7.7 3.9 2.0 1 1 0 1 1 1 0 Septum formation initiator Peptidase_S49 PF01343.18 gi|21226968|ref|NP_632890.1| - 5.3e-45 153.1 0.1 9.6e-45 152.3 0.1 1.4 1 0 0 1 1 1 1 Peptidase family S49 Zip PF02535.22 gi|21226968|ref|NP_632890.1| - 0.0015 17.8 0.1 0.0021 17.3 0.1 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter CLP_protease PF00574.23 gi|21226968|ref|NP_632890.1| - 0.0029 17.5 0.7 0.021 14.7 0.2 2.1 2 0 0 2 2 2 1 Clp protease Ligase_CoA PF00549.19 gi|21226968|ref|NP_632890.1| - 0.012 15.4 0.1 0.027 14.3 0.1 1.5 1 0 0 1 1 1 0 CoA-ligase p25-alpha PF05517.12 gi|21226968|ref|NP_632890.1| - 0.025 14.7 0.6 2.5 8.3 0.1 2.3 2 0 0 2 2 2 0 p25-alpha Asparaginase_C PF17763.1 gi|21226968|ref|NP_632890.1| - 0.12 12.6 0.2 0.27 11.5 0.2 1.6 1 0 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain DUF3568 PF12092.8 gi|21226968|ref|NP_632890.1| - 3.8 7.6 6.7 0.69 10.0 1.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3568) tRNA-synt_1g PF09334.11 gi|161485679|ref|NP_632891.2| - 1.1e-154 514.9 0.0 1.4e-154 514.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|161485679|ref|NP_632891.2| - 6.3e-27 93.5 2.9 6.3e-27 93.5 0.4 2.3 2 0 0 2 2 2 1 Putative tRNA binding domain Anticodon_1 PF08264.13 gi|161485679|ref|NP_632891.2| - 4.2e-22 78.8 0.1 6.8e-22 78.1 0.1 1.3 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1 PF00133.22 gi|161485679|ref|NP_632891.2| - 3.4e-18 65.2 0.0 6.6e-10 37.9 0.0 3.9 3 1 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 gi|161485679|ref|NP_632891.2| - 1.4e-16 60.7 0.0 1.8e-10 40.7 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|161485679|ref|NP_632891.2| - 0.0064 15.4 0.0 0.091 11.7 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (K) TackOD1 PF18551.1 gi|161485679|ref|NP_632891.2| - 0.073 12.7 0.2 0.14 11.8 0.2 1.3 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 zf-RING_7 PF02591.15 gi|161485679|ref|NP_632891.2| - 1.4 9.2 3.8 3 8.1 0.1 3.0 2 0 0 2 2 2 0 C4-type zinc ribbon domain DZR PF12773.7 gi|161485679|ref|NP_632891.2| - 1.9 8.6 8.7 9.4 6.3 8.7 2.1 1 1 0 1 1 1 0 Double zinc ribbon CYTH PF01928.21 gi|21226970|ref|NP_632892.1| - 9.5e-40 136.4 0.1 1.1e-39 136.3 0.1 1.0 1 0 0 1 1 1 1 CYTH domain DUF3954 PF13128.6 gi|21226970|ref|NP_632892.1| - 0.12 12.2 0.2 1.5 8.7 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3954) OB_aCoA_assoc PF01796.17 gi|21226971|ref|NP_632893.1| - 1.3e-18 66.7 0.0 2e-18 66.1 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|21226971|ref|NP_632893.1| - 1e-10 41.3 0.7 1.4e-10 40.8 0.7 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Thiolase_N PF00108.23 gi|21226972|ref|NP_632894.1| - 2.3e-24 86.2 2.2 6e-24 84.8 2.2 1.7 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|21226972|ref|NP_632894.1| - 2.2e-12 46.7 2.5 1.4e-11 44.1 1.7 2.8 2 1 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|21226972|ref|NP_632894.1| - 1.9e-06 27.6 4.6 7.1e-06 25.8 4.3 1.9 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|21226972|ref|NP_632894.1| - 0.038 14.0 0.1 0.038 14.0 0.1 3.1 4 0 0 4 4 4 0 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III PF08545.10 gi|21226972|ref|NP_632894.1| - 0.55 10.1 5.7 0.44 10.4 1.0 2.5 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACP_syn_III_C PF08541.10 gi|21226973|ref|NP_632895.1| - 6.3e-11 42.3 0.0 1.3e-10 41.3 0.0 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.10 gi|21226973|ref|NP_632895.1| - 3.8e-06 26.7 0.0 0.00024 20.9 0.0 2.3 1 1 1 2 2 2 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thiolase_N PF00108.23 gi|21226973|ref|NP_632895.1| - 0.00016 21.1 0.6 0.00039 19.9 0.6 1.5 2 0 0 2 2 2 1 Thiolase, N-terminal domain HMG_CoA_synt_N PF01154.17 gi|21226973|ref|NP_632895.1| - 0.00096 19.1 0.2 0.0013 18.6 0.2 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ACP_syn_III PF08545.10 gi|21226973|ref|NP_632895.1| - 1.6 8.6 6.2 0.91 9.4 2.5 2.3 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HTH_3 PF01381.22 gi|21226974|ref|NP_632896.1| - 4.3e-08 33.1 0.0 1.9e-07 31.0 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|21226974|ref|NP_632896.1| - 8.9e-07 28.8 0.0 2.7e-06 27.3 0.0 1.9 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|21226974|ref|NP_632896.1| - 0.0011 19.2 0.0 0.0042 17.4 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21226974|ref|NP_632896.1| - 0.095 12.7 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_38 PF13936.6 gi|21226974|ref|NP_632896.1| - 0.11 12.3 0.0 0.35 10.7 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Cas_Cas4 PF01930.17 gi|21226975|ref|NP_632897.1| - 7.1e-11 42.5 0.1 1.3e-08 35.1 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|21226975|ref|NP_632897.1| - 0.007 16.3 0.2 2.2 8.1 0.0 2.3 2 1 0 2 2 2 2 PD-(D/E)XK nuclease superfamily DUF3869 PF12985.7 gi|21226976|ref|NP_632898.1| - 3.6 8.0 7.7 2.8 8.4 4.5 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF3869) DDE_Tnp_1 PF01609.21 gi|21226979|ref|NP_632901.1| - 6.6e-06 25.9 0.0 9.5e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Transposase DDE domain DUF2149 PF09919.9 gi|21226979|ref|NP_632901.1| - 0.068 13.4 0.2 0.19 12.0 0.1 1.7 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2149) Plasmid_parti PF01672.16 gi|21226980|ref|NP_632902.1| - 0.026 15.2 0.1 0.026 15.2 0.1 1.0 1 0 0 1 1 1 0 Putative plasmid partition protein RVT_3 PF13456.6 gi|21226980|ref|NP_632902.1| - 0.098 12.5 0.0 0.1 12.4 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase-like FtsX PF02687.21 gi|21226981|ref|NP_632903.1| - 0.034 14.6 3.1 0.05 14.1 3.1 1.4 1 1 0 1 1 1 0 FtsX-like permease family RseC_MucC PF04246.12 gi|21226981|ref|NP_632903.1| - 0.18 11.8 1.2 0.23 11.4 1.2 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC LolA_like PF17131.4 gi|21226982|ref|NP_632904.1| - 2.7e-12 46.8 0.6 2.4e-11 43.7 0.1 2.6 1 1 1 2 2 2 1 Outer membrane lipoprotein-sorting protein DUF1571 PF07608.11 gi|21226982|ref|NP_632904.1| - 2.5e-08 33.6 0.0 7.3e-08 32.1 0.0 1.7 2 1 1 3 3 3 1 Protein of unknown function (DUF1571) MucB_RseB PF03888.14 gi|21226982|ref|NP_632904.1| - 1.1e-05 25.1 0.0 1.5e-05 24.6 0.0 1.5 1 1 0 1 1 1 1 MucB/RseB N-terminal domain LolA PF03548.15 gi|21226982|ref|NP_632904.1| - 5.1e-05 23.0 0.0 0.00014 21.6 0.0 1.7 1 1 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA DUF2092 PF09865.9 gi|21226982|ref|NP_632904.1| - 0.0015 17.9 0.0 0.018 14.4 0.0 2.2 2 1 0 2 2 2 1 Predicted periplasmic protein (DUF2092) DUF1329 PF07044.11 gi|21226982|ref|NP_632904.1| - 0.0034 16.7 0.3 0.0054 16.1 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1329) MULE PF10551.9 gi|21226983|ref|NP_632905.1| - 0.00039 20.8 0.0 0.00093 19.6 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|21226983|ref|NP_632905.1| - 0.00062 19.3 0.2 0.0064 16.0 0.2 2.0 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.18 gi|21226983|ref|NP_632905.1| - 0.031 14.0 1.5 0.045 13.5 0.7 1.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family GUN4_N PF16416.5 gi|21226984|ref|NP_632906.1| - 0.0075 16.2 0.4 1.6 8.8 0.1 2.5 2 0 0 2 2 2 2 ARM-like repeat domain, GUN4-N terminal DUF883 PF05957.13 gi|21226984|ref|NP_632906.1| - 0.083 13.5 5.9 2.2 8.9 0.4 2.7 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF883) Receptor_IA-2 PF11548.8 gi|21226984|ref|NP_632906.1| - 0.11 12.5 0.1 7.8 6.6 0.0 2.6 2 0 0 2 2 2 0 Protein-tyrosine phosphatase receptor IA-2 AAA_15 PF13175.6 gi|21226984|ref|NP_632906.1| - 0.24 11.1 14.0 0.024 14.4 3.7 2.0 1 1 0 2 2 2 0 AAA ATPase domain Cyclin_C_2 PF16899.5 gi|21226984|ref|NP_632906.1| - 0.45 10.9 3.1 7.1 7.1 1.4 2.6 1 1 1 2 2 2 0 Cyclin C-terminal domain Scm3 PF10384.9 gi|21226984|ref|NP_632906.1| - 1 9.1 6.1 3.3 7.5 1.3 2.6 2 0 0 2 2 2 0 Centromere protein Scm3 DUF1018 PF06252.12 gi|21226984|ref|NP_632906.1| - 1.5 9.8 5.6 0.74 10.8 0.5 2.7 2 2 1 3 3 3 0 Protein of unknown function (DUF1018) DUF3038 PF11237.8 gi|21226984|ref|NP_632906.1| - 3.7 7.5 5.2 12 5.9 0.2 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF3038) PAPS_reduct PF01507.19 gi|21226985|ref|NP_632907.1| - 4.7e-40 137.5 0.0 7.8e-40 136.7 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.20 gi|21226985|ref|NP_632907.1| - 3.5e-18 65.3 0.1 8.1e-18 64.2 0.1 1.6 1 0 0 1 1 1 1 PUA domain Fer4 PF00037.27 gi|21226985|ref|NP_632907.1| - 1.5e-08 34.1 15.3 6.5e-05 22.6 2.9 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21226985|ref|NP_632907.1| - 4.4e-07 29.7 11.7 0.0003 20.7 2.2 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21226985|ref|NP_632907.1| - 1.1e-06 29.1 11.0 6.1e-06 26.7 11.0 2.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21226985|ref|NP_632907.1| - 3.4e-05 23.9 22.5 5.6e-05 23.2 12.9 2.6 3 1 1 4 4 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21226985|ref|NP_632907.1| - 3.4e-05 23.9 9.9 3.4e-05 23.9 9.9 2.0 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21226985|ref|NP_632907.1| - 6.3e-05 23.0 11.3 0.00023 21.2 11.3 2.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21226985|ref|NP_632907.1| - 0.00063 19.7 1.8 0.00063 19.7 1.8 3.4 4 0 0 4 4 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21226985|ref|NP_632907.1| - 0.0012 19.7 13.2 0.19 12.7 3.4 3.3 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|21226985|ref|NP_632907.1| - 0.01 16.3 3.0 0.01 16.3 3.0 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21226985|ref|NP_632907.1| - 0.014 16.3 5.3 0.014 16.3 5.3 3.6 4 0 0 4 4 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21226985|ref|NP_632907.1| - 0.021 15.4 11.4 1.2 9.7 3.2 2.9 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21226985|ref|NP_632907.1| - 0.041 14.7 8.0 0.64 10.9 1.1 2.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain S19 PF06756.11 gi|21226985|ref|NP_632907.1| - 0.044 13.7 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Chorion protein S19 C-terminal UPF0113 PF03657.13 gi|21226985|ref|NP_632907.1| - 0.12 12.6 0.0 0.28 11.5 0.0 1.5 1 0 0 1 1 1 0 UPF0113 PUA domain Fer4_18 PF13746.6 gi|21226985|ref|NP_632907.1| - 0.75 10.0 8.8 5.1 7.3 8.8 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Ezh2_MCSS PF18600.1 gi|21226985|ref|NP_632907.1| - 1.6 8.4 7.5 3.5 7.3 4.2 2.4 2 0 0 2 2 2 0 MCSS domain Fer4_8 PF13183.6 gi|21226985|ref|NP_632907.1| - 3.4 8.2 19.1 52 4.4 2.7 3.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21226985|ref|NP_632907.1| - 3.9 8.3 10.0 18 6.2 1.7 3.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Inhibitor_I42 PF09394.10 gi|21226986|ref|NP_632908.1| - 5.8e-14 52.3 0.0 6.5e-14 52.1 0.0 1.0 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 IMS PF00817.20 gi|21226988|ref|NP_632910.1| - 1.1e-39 135.8 0.0 1.9e-39 135.0 0.0 1.4 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 gi|21226988|ref|NP_632910.1| - 3.1e-12 47.2 0.2 9.6e-12 45.6 0.2 1.8 2 1 0 2 2 2 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|21226988|ref|NP_632910.1| - 2.3e-11 43.3 0.1 8.1e-11 41.6 0.1 2.0 1 0 0 1 1 1 1 IMS family HHH motif DNA_pol_lambd_f PF10391.9 gi|21226988|ref|NP_632910.1| - 0.00057 19.7 0.0 0.0013 18.5 0.0 1.5 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH_5 PF14520.6 gi|21226988|ref|NP_632910.1| - 0.0055 17.3 0.9 0.017 15.8 0.1 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|21226988|ref|NP_632910.1| - 0.013 15.8 0.0 0.027 14.7 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus DUF1805 PF08827.11 gi|21226988|ref|NP_632910.1| - 0.18 12.2 0.0 8.7 6.8 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) ABC_tran PF00005.27 gi|21226989|ref|NP_632911.1| - 3.3e-32 111.9 0.0 4.8e-32 111.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21226989|ref|NP_632911.1| - 9.4e-16 58.5 1.5 4e-11 43.3 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21226989|ref|NP_632911.1| - 8.1e-09 35.2 0.0 2e-08 34.0 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|21226989|ref|NP_632911.1| - 0.013 15.3 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|21226989|ref|NP_632911.1| - 0.023 14.8 0.1 0.085 12.9 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase BCA_ABC_TP_C PF12399.8 gi|21226989|ref|NP_632911.1| - 0.033 14.1 0.0 0.09 12.7 0.0 1.8 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter SbcCD_C PF13558.6 gi|21226989|ref|NP_632911.1| - 0.046 14.0 0.0 0.73 10.1 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 gi|21226989|ref|NP_632911.1| - 0.063 13.2 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase Mg_chelatase PF01078.21 gi|21226989|ref|NP_632911.1| - 0.077 12.4 0.1 0.19 11.1 0.1 1.6 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|21226989|ref|NP_632911.1| - 0.077 13.2 0.0 0.17 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|21226989|ref|NP_632911.1| - 0.096 13.2 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain CbiQ PF02361.16 gi|21226990|ref|NP_632912.1| - 3.1e-36 125.1 6.9 3.8e-36 124.7 6.9 1.1 1 0 0 1 1 1 1 Cobalt transport protein PAS_3 PF08447.12 gi|21226991|ref|NP_632913.1| - 7.1e-43 144.8 0.4 1.1e-21 76.9 0.0 2.8 2 0 0 2 2 2 2 PAS fold HisKA_2 PF07568.12 gi|21226991|ref|NP_632913.1| - 6.9e-30 103.0 1.5 6.9e-30 103.0 1.5 2.2 2 0 0 2 2 2 1 Histidine kinase HATPase_c PF02518.26 gi|21226991|ref|NP_632913.1| - 5.5e-10 39.8 3.0 2.7e-09 37.5 1.3 2.7 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|21226991|ref|NP_632913.1| - 2.1e-09 37.3 0.2 0.00034 20.6 0.0 3.0 3 0 0 3 3 3 2 PAS fold PAS_9 PF13426.7 gi|21226991|ref|NP_632913.1| - 7.4e-08 32.6 0.4 0.03 14.6 0.0 3.2 3 0 0 3 3 3 2 PAS domain HATPase_c_2 PF13581.6 gi|21226991|ref|NP_632913.1| - 2.6e-07 30.6 0.0 5.8e-07 29.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.10 gi|21226991|ref|NP_632913.1| - 0.00024 21.3 0.0 0.019 15.2 0.0 2.5 2 0 0 2 2 2 1 PAS fold HWE_HK PF07536.14 gi|21226991|ref|NP_632913.1| - 0.00054 20.6 2.1 0.00069 20.3 0.5 2.1 2 0 0 2 2 2 1 HWE histidine kinase HATPase_c_3 PF13589.6 gi|21226991|ref|NP_632913.1| - 0.0078 16.1 0.1 0.019 14.8 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.6 gi|21226991|ref|NP_632913.1| - 0.081 13.1 0.0 0.55 10.4 0.0 2.4 2 0 0 2 2 2 0 PAS domain AROS PF15684.5 gi|21226991|ref|NP_632913.1| - 4.5 7.9 7.1 0.51 10.9 0.5 2.4 3 0 0 3 3 3 0 Active regulator of SIRT1, or 40S ribosomal protein S19-binding 1 NAS PF03059.16 gi|21226992|ref|NP_632914.1| - 1.2e-32 113.4 0.0 1.5e-32 113.1 0.0 1.1 1 0 0 1 1 1 1 Nicotianamine synthase protein DUF2113 PF09886.9 gi|21226992|ref|NP_632914.1| - 0.04 13.3 0.1 0.097 12.0 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2113) NAS PF03059.16 gi|21226993|ref|NP_632915.1| - 1.5e-18 67.2 0.0 1.8e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 Nicotianamine synthase protein Methyltransf_31 PF13847.6 gi|21226993|ref|NP_632915.1| - 2.4e-05 24.2 0.0 4e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21226993|ref|NP_632915.1| - 0.0016 19.1 0.0 0.0035 18.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|21226993|ref|NP_632915.1| - 0.012 15.5 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_3 PF01596.17 gi|21226993|ref|NP_632915.1| - 0.014 14.6 0.0 0.021 14.0 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_11 PF08241.12 gi|21226993|ref|NP_632915.1| - 0.042 14.5 0.0 0.079 13.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Vel1p PF10339.9 gi|21226993|ref|NP_632915.1| - 0.14 11.5 0.1 0.24 10.8 0.1 1.5 1 0 0 1 1 1 0 Yeast-specific zinc responsive Met_10 PF02475.16 gi|21226993|ref|NP_632915.1| - 0.15 11.8 0.0 0.22 11.3 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_11 PF08241.12 gi|21226994|ref|NP_632916.1| - 2.2e-26 92.3 0.0 3.2e-26 91.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21226994|ref|NP_632916.1| - 1.3e-24 86.7 0.0 2.1e-24 86.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21226994|ref|NP_632916.1| - 2.7e-23 82.4 0.0 3.6e-23 82.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21226994|ref|NP_632916.1| - 2.3e-17 63.1 0.0 3e-17 62.7 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|21226994|ref|NP_632916.1| - 7.7e-14 51.9 0.0 1.1e-13 51.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21226994|ref|NP_632916.1| - 5.5e-12 46.3 0.0 8.9e-12 45.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|21226994|ref|NP_632916.1| - 4.1e-07 29.7 0.0 9.4e-07 28.5 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|21226994|ref|NP_632916.1| - 1.3e-06 28.1 0.0 1.8e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 gi|21226994|ref|NP_632916.1| - 1.7e-05 24.7 0.0 2.6e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 gi|21226994|ref|NP_632916.1| - 2e-05 24.6 0.0 3.1e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 gi|21226994|ref|NP_632916.1| - 2.8e-05 23.8 0.0 4.3e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) MetW PF07021.12 gi|21226994|ref|NP_632916.1| - 3.3e-05 23.6 0.0 5.5e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TPMT PF05724.11 gi|21226994|ref|NP_632916.1| - 0.0011 18.6 0.0 0.0025 17.5 0.0 1.6 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_15 PF09445.10 gi|21226994|ref|NP_632916.1| - 0.0021 17.7 0.0 0.0031 17.1 0.0 1.4 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_8 PF05148.15 gi|21226994|ref|NP_632916.1| - 0.006 16.5 0.0 0.011 15.6 0.0 1.5 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_18 PF12847.7 gi|21226994|ref|NP_632916.1| - 0.0064 16.4 0.0 0.0097 15.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21226994|ref|NP_632916.1| - 0.0085 15.4 0.0 0.012 14.9 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase RrnaAD PF00398.20 gi|21226994|ref|NP_632916.1| - 0.0096 15.0 0.0 0.015 14.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Mur_ligase PF01225.25 gi|21226994|ref|NP_632916.1| - 0.014 15.7 0.0 0.027 14.8 0.0 1.4 1 0 0 1 1 1 0 Mur ligase family, catalytic domain TehB PF03848.14 gi|21226994|ref|NP_632916.1| - 0.016 14.6 0.0 0.029 13.8 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB UPF0020 PF01170.18 gi|21226994|ref|NP_632916.1| - 0.028 14.1 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 GidB PF02527.15 gi|21226994|ref|NP_632916.1| - 0.031 13.6 0.0 0.066 12.5 0.0 1.5 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G Sec15 PF04091.12 gi|21226994|ref|NP_632916.1| - 0.091 12.2 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Exocyst complex subunit Sec15-like CbiM PF01891.16 gi|21226995|ref|NP_632917.1| - 5.2e-55 186.5 22.7 5.8e-55 186.3 22.7 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region EbsA PF17255.2 gi|21226995|ref|NP_632917.1| - 0.033 14.5 1.3 0.068 13.5 1.3 1.5 1 0 0 1 1 1 0 EbsA-like protein PDGLE PF13190.6 gi|21226996|ref|NP_632918.1| - 1.9e-15 56.5 1.1 2.4e-15 56.2 1.1 1.1 1 0 0 1 1 1 1 PDGLE domain HhH-GPD PF00730.25 gi|21226997|ref|NP_632919.1| - 1.9e-21 76.5 0.0 2.6e-21 76.1 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|21226997|ref|NP_632919.1| - 4.4e-09 35.7 0.0 1.2e-08 34.3 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|21226997|ref|NP_632919.1| - 0.00012 22.3 3.8 0.00022 21.5 3.8 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|21226997|ref|NP_632919.1| - 0.035 14.7 0.1 0.97 10.1 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix domain 5_3_exonuc PF01367.20 gi|21226997|ref|NP_632919.1| - 0.047 14.3 0.0 0.15 12.7 0.0 1.8 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Urocanase_N PF17391.2 gi|21226997|ref|NP_632919.1| - 0.15 11.8 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Urocanase N-terminal domain Pyr_redox_dim PF02852.22 gi|21226998|ref|NP_632920.1| - 3.6e-16 59.4 0.0 5.1e-16 58.9 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_2 PF07992.14 gi|21226999|ref|NP_632921.1| - 1.4e-53 182.1 0.0 1.5e-53 181.9 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|21226999|ref|NP_632921.1| - 6.6e-16 58.6 0.3 8.5e-14 51.9 0.0 3.1 3 1 1 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|21226999|ref|NP_632921.1| - 2.3e-11 43.5 0.4 6.1e-09 35.6 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|21226999|ref|NP_632921.1| - 0.00011 21.1 0.1 0.35 9.5 0.0 2.4 2 0 0 2 2 2 2 HI0933-like protein DAO PF01266.24 gi|21226999|ref|NP_632921.1| - 0.00063 19.4 2.2 0.008 15.8 1.9 2.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|21226999|ref|NP_632921.1| - 0.0055 16.1 0.1 2.3 7.5 0.0 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|21226999|ref|NP_632921.1| - 0.0086 15.2 0.8 0.044 12.9 0.1 2.2 2 1 1 3 3 3 1 FAD binding domain GDI PF00996.18 gi|21226999|ref|NP_632921.1| - 0.011 14.3 0.0 0.017 13.6 0.0 1.2 1 0 0 1 1 1 0 GDP dissociation inhibitor 2-Hacid_dh_C PF02826.19 gi|21226999|ref|NP_632921.1| - 0.02 14.3 0.0 0.15 11.4 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 gi|21226999|ref|NP_632921.1| - 0.039 14.2 1.5 0.66 10.3 0.2 2.6 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|21226999|ref|NP_632921.1| - 0.068 12.4 0.0 3.5 6.8 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain TrkA_N PF02254.18 gi|21226999|ref|NP_632921.1| - 0.085 13.1 0.1 0.3 11.4 0.1 2.0 2 0 0 2 2 1 0 TrkA-N domain Thi4 PF01946.17 gi|21226999|ref|NP_632921.1| - 0.1 11.8 0.2 0.31 10.2 0.1 1.8 2 0 0 2 2 2 0 Thi4 family F420_oxidored PF03807.17 gi|21226999|ref|NP_632921.1| - 0.12 12.9 0.2 1.1 9.8 0.1 2.5 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Lycopene_cycl PF05834.12 gi|21226999|ref|NP_632921.1| - 0.14 11.1 0.0 0.24 10.4 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein AICARFT_IMPCHas PF01808.18 gi|21227000|ref|NP_632922.1| - 5e-100 334.8 0.0 6.4e-100 334.4 0.0 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 gi|21227000|ref|NP_632922.1| - 2.7e-26 91.6 0.1 4.9e-26 90.8 0.1 1.4 1 0 0 1 1 1 1 MGS-like domain MgsA_C PF12002.8 gi|21227000|ref|NP_632922.1| - 0.0076 16.2 0.0 0.021 14.8 0.0 1.7 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal DNA_topoisoIV PF00521.20 gi|21227000|ref|NP_632922.1| - 0.18 10.7 0.0 0.27 10.1 0.0 1.2 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A DUF1724 PF08350.10 gi|21227001|ref|NP_632923.1| - 2e-22 79.1 0.5 5.1e-22 77.8 0.5 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21227001|ref|NP_632923.1| - 0.0018 18.1 0.0 0.0034 17.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family JIP_LZII PF16471.5 gi|21227001|ref|NP_632923.1| - 0.016 15.4 0.2 0.84 9.9 0.0 2.3 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II HTH_20 PF12840.7 gi|21227001|ref|NP_632923.1| - 0.11 12.5 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|21227001|ref|NP_632923.1| - 0.17 11.5 0.8 2.2 7.9 0.0 2.6 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding UbiA PF01040.18 gi|21227002|ref|NP_632924.1| - 2.2e-15 56.7 2.4 2.2e-15 56.7 2.4 2.0 2 0 0 2 2 2 2 UbiA prenyltransferase family E1-E2_ATPase PF00122.20 gi|21227003|ref|NP_632925.1| - 1.5e-48 164.7 6.0 1.5e-48 164.7 6.0 2.4 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|21227003|ref|NP_632925.1| - 1.3e-42 145.6 9.6 3.3e-42 144.2 9.6 1.8 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Cation_ATPase_N PF00690.26 gi|21227003|ref|NP_632925.1| - 5.2e-19 67.7 0.1 1.6e-18 66.1 0.0 2.0 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase PF00702.26 gi|21227003|ref|NP_632925.1| - 5.4e-19 69.3 3.8 1.1e-17 65.1 3.8 2.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|21227003|ref|NP_632925.1| - 5.6e-18 64.8 0.0 1.3e-17 63.6 0.0 1.7 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|21227003|ref|NP_632925.1| - 3.5e-07 30.2 0.3 0.00017 21.4 0.2 2.6 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|21227003|ref|NP_632925.1| - 0.14 12.5 0.0 0.52 10.7 0.0 2.0 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Methyltransf_25 PF13649.6 gi|21227004|ref|NP_632926.1| - 6.3e-11 42.8 0.0 1.2e-10 42.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|21227004|ref|NP_632926.1| - 7.8e-09 35.0 0.0 1.1e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.19 gi|21227004|ref|NP_632926.1| - 5.9e-07 29.4 0.0 9.4e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|21227004|ref|NP_632926.1| - 9.9e-07 29.4 0.0 2.1e-06 28.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21227004|ref|NP_632926.1| - 3.2e-06 27.1 0.0 5.2e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21227004|ref|NP_632926.1| - 7.5e-06 26.5 0.0 1.4e-05 25.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|21227004|ref|NP_632926.1| - 1.4e-05 24.7 0.0 2.5e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_31 PF13847.6 gi|21227004|ref|NP_632926.1| - 1.6e-05 24.8 0.0 2.7e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|21227004|ref|NP_632926.1| - 0.00011 21.5 0.0 0.00028 20.2 0.0 1.6 2 0 0 2 2 2 1 rRNA small subunit methyltransferase G Methyltr_RsmB-F PF01189.17 gi|21227004|ref|NP_632926.1| - 0.00016 21.4 0.0 0.00033 20.4 0.0 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F MTS PF05175.14 gi|21227004|ref|NP_632926.1| - 0.00088 18.9 0.0 0.0019 17.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_16 PF10294.9 gi|21227004|ref|NP_632926.1| - 0.0015 18.3 0.0 0.0023 17.7 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase DREV PF05219.12 gi|21227004|ref|NP_632926.1| - 0.0017 17.5 0.0 0.0026 16.9 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase CMAS PF02353.20 gi|21227004|ref|NP_632926.1| - 0.0017 17.7 0.0 0.0025 17.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Cons_hypoth95 PF03602.15 gi|21227004|ref|NP_632926.1| - 0.0033 17.1 0.0 0.0053 16.4 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 gi|21227004|ref|NP_632926.1| - 0.0036 17.2 0.0 0.0098 15.8 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21227004|ref|NP_632926.1| - 0.0089 15.4 0.0 0.012 14.9 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.17 gi|21227004|ref|NP_632926.1| - 0.026 14.0 0.5 0.086 12.3 0.0 1.9 2 0 0 2 2 2 0 Putative methyltransferase PrmA PF06325.13 gi|21227004|ref|NP_632926.1| - 0.035 13.5 0.0 0.082 12.3 0.0 1.6 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DUF938 PF06080.12 gi|21227004|ref|NP_632926.1| - 0.037 13.8 0.0 0.053 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) P21-Arc PF04062.14 gi|21227004|ref|NP_632926.1| - 0.07 13.2 0.1 6.5 6.8 0.0 2.8 2 1 1 3 3 3 0 ARP2/3 complex ARPC3 (21 kDa) subunit Phage_Coat_A PF05357.13 gi|21227004|ref|NP_632926.1| - 0.11 12.3 0.4 18 5.2 0.0 2.5 2 0 0 2 2 2 0 Phage Coat Protein A Met_10 PF02475.16 gi|21227004|ref|NP_632926.1| - 0.17 11.7 0.0 0.32 10.7 0.0 1.4 1 1 0 1 1 1 0 Met-10+ like-protein Gpr1_Fun34_YaaH PF01184.19 gi|21227005|ref|NP_632927.1| - 7.6e-42 143.3 17.9 9.3e-42 143.0 17.9 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family iPGM_N PF06415.13 gi|21227006|ref|NP_632928.1| - 5.4e-86 287.5 0.0 7.5e-86 287.0 0.0 1.2 1 0 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Metalloenzyme PF01676.18 gi|21227006|ref|NP_632928.1| - 3.8e-82 275.4 0.0 4.4e-82 275.2 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|21227006|ref|NP_632928.1| - 4.8e-05 23.1 0.0 7.9e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 gi|21227006|ref|NP_632928.1| - 0.0024 18.0 0.1 0.0048 17.0 0.1 1.5 1 0 0 1 1 1 1 PglZ domain Sulfatase PF00884.23 gi|21227006|ref|NP_632928.1| - 0.0028 17.1 0.0 0.0067 15.9 0.0 1.7 1 0 0 1 1 1 1 Sulfatase GHMP_kinases_N PF00288.26 gi|21227007|ref|NP_632929.1| - 5.2e-06 26.6 0.5 1.1e-05 25.6 0.5 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|21227007|ref|NP_632929.1| - 3e-05 24.3 0.0 7.1e-05 23.1 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal Terminase_3 PF04466.13 gi|21227007|ref|NP_632929.1| - 0.009 15.6 0.3 0.14 11.7 0.0 2.1 2 0 0 2 2 2 1 Phage terminase large subunit XPG_I PF00867.18 gi|21227008|ref|NP_632930.1| - 2.2e-28 98.4 0.2 1e-27 96.3 0.0 2.1 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 gi|21227008|ref|NP_632930.1| - 3.2e-20 72.5 0.0 6.4e-20 71.5 0.0 1.5 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|21227008|ref|NP_632930.1| - 0.00017 22.2 1.2 0.00034 21.1 0.1 2.1 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 gi|21227008|ref|NP_632930.1| - 0.014 16.0 0.0 0.043 14.4 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|21227008|ref|NP_632930.1| - 0.065 13.3 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF4919 PF16266.5 gi|21227009|ref|NP_632931.1| - 0.017 15.1 0.2 0.019 14.9 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4919) MEDS PF14417.6 gi|21227009|ref|NP_632931.1| - 0.033 14.0 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain DUF1664 PF07889.12 gi|21227010|ref|NP_632932.1| - 0.054 13.5 0.3 0.069 13.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) MtrG PF04210.13 gi|21227010|ref|NP_632932.1| - 0.16 11.9 1.6 2.3 8.1 0.2 2.3 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G COX16 PF14138.6 gi|21227010|ref|NP_632932.1| - 0.87 10.1 5.2 28 5.3 5.2 2.1 1 1 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 SPP PF06550.11 gi|21227011|ref|NP_632933.1| - 5.9e-124 413.1 26.2 7e-124 412.9 26.2 1.0 1 0 0 1 1 1 1 Signal-peptide peptidase, presenilin aspartyl protease Peptidase_A22B PF04258.13 gi|21227011|ref|NP_632933.1| - 1.1e-09 38.2 16.8 2e-09 37.4 16.8 1.4 1 1 0 1 1 1 1 Signal peptide peptidase Hydrolase PF00702.26 gi|21227012|ref|NP_632934.1| - 2.4e-17 63.9 0.1 1.1e-16 61.7 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|21227012|ref|NP_632934.1| - 3.2e-05 23.9 0.0 7.6e-05 22.7 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_3 PF08282.12 gi|21227012|ref|NP_632934.1| - 0.00024 20.9 0.6 0.12 12.1 0.0 2.9 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|21227012|ref|NP_632934.1| - 0.022 14.8 0.0 0.041 14.0 0.0 1.6 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase ABC_tran PF00005.27 gi|21227013|ref|NP_632935.1| - 5.3e-51 172.7 0.0 3.2e-25 89.2 0.0 2.6 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|21227013|ref|NP_632935.1| - 3.6e-05 23.3 1.2 0.74 9.2 0.0 3.3 2 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|21227013|ref|NP_632935.1| - 6.1e-05 23.0 0.5 0.34 10.8 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 gi|21227013|ref|NP_632935.1| - 0.00075 19.9 0.0 0.11 12.9 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 gi|21227013|ref|NP_632935.1| - 0.0013 18.6 3.4 3.3 7.4 0.0 3.8 3 1 1 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|21227013|ref|NP_632935.1| - 0.0014 18.4 0.1 1.5 8.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|21227013|ref|NP_632935.1| - 0.0017 18.0 1.0 0.87 9.4 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain PRK PF00485.18 gi|21227013|ref|NP_632935.1| - 0.0037 17.0 0.1 2.9 7.6 0.0 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 gi|21227013|ref|NP_632935.1| - 0.004 17.7 3.8 1.6 9.2 0.1 3.4 4 0 0 4 4 4 2 AAA domain AAA_33 PF13671.6 gi|21227013|ref|NP_632935.1| - 0.0061 16.7 0.1 0.95 9.6 0.1 2.6 2 0 0 2 2 2 1 AAA domain MobB PF03205.14 gi|21227013|ref|NP_632935.1| - 0.0086 16.0 0.5 2.7 7.9 0.1 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.6 gi|21227013|ref|NP_632935.1| - 0.02 15.4 2.1 2.1 8.8 0.2 2.5 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|21227013|ref|NP_632935.1| - 0.026 13.9 0.2 0.59 9.5 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ATPase PF06745.13 gi|21227013|ref|NP_632935.1| - 0.027 13.8 1.0 1.1 8.5 0.1 2.7 2 0 0 2 2 2 0 KaiC AAA_22 PF13401.6 gi|21227013|ref|NP_632935.1| - 0.043 14.1 0.6 15 5.8 0.2 2.7 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|21227013|ref|NP_632935.1| - 0.06 12.5 3.7 1.2 8.2 0.2 2.8 3 0 0 3 3 3 0 NB-ARC domain DUF4796 PF16044.5 gi|21227013|ref|NP_632935.1| - 0.067 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4796) SbcCD_C PF13558.6 gi|21227013|ref|NP_632935.1| - 0.071 13.4 0.0 25 5.2 0.0 3.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit PhoH PF02562.16 gi|21227013|ref|NP_632935.1| - 0.075 12.5 0.4 2 7.8 0.0 3.0 3 0 0 3 3 3 0 PhoH-like protein IstB_IS21 PF01695.17 gi|21227013|ref|NP_632935.1| - 0.084 12.6 0.6 41 3.8 0.0 3.2 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA PF00004.29 gi|21227013|ref|NP_632935.1| - 0.15 12.5 0.8 29 5.1 0.1 3.3 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) zf-C3HC4_3 PF13920.6 gi|21227013|ref|NP_632935.1| - 0.18 11.7 0.4 0.3 11.0 0.4 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) AAA_24 PF13479.6 gi|21227013|ref|NP_632935.1| - 0.37 10.5 2.6 15 5.2 0.4 2.5 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 gi|21227013|ref|NP_632935.1| - 1.3 9.0 9.0 1.3 9.1 0.3 2.8 3 0 0 3 3 2 0 Helicase HerA, central domain NACHT PF05729.12 gi|21227013|ref|NP_632935.1| - 2.4 8.0 5.5 1.1 9.1 0.4 2.4 2 0 0 2 2 2 0 NACHT domain Cut12 PF11500.8 gi|21227014|ref|NP_632936.1| - 0.0055 16.7 0.1 0.013 15.4 0.1 1.6 1 0 0 1 1 1 1 Spindle pole body formation-associated protein DUF2102 PF09875.9 gi|21227015|ref|NP_632937.1| - 6.8e-43 144.6 0.0 9.6e-43 144.1 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) DUF2112 PF09885.9 gi|21227016|ref|NP_632938.1| - 3.9e-66 221.5 0.1 4.6e-66 221.3 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) Oxidored_nitro PF00148.19 gi|21227016|ref|NP_632938.1| - 0.058 12.1 0.0 0.065 12.0 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase BcrAD_BadFG PF01869.20 gi|21227017|ref|NP_632939.1| - 2.1e-56 191.4 4.1 2.8e-56 191.0 4.1 1.1 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.6 gi|21227017|ref|NP_632939.1| - 0.0038 17.6 0.7 0.054 13.9 0.7 2.4 1 1 0 1 1 1 1 Cell division protein FtsA Hydant_A_N PF05378.13 gi|21227017|ref|NP_632939.1| - 0.007 16.1 0.6 0.021 14.6 0.6 1.8 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region DUF2113 PF09886.9 gi|21227018|ref|NP_632940.1| - 6.6e-67 224.4 0.8 7.4e-67 224.3 0.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) MCR_C PF04609.12 gi|21227019|ref|NP_632941.1| - 2.1e-124 414.0 0.3 2.4e-124 413.8 0.3 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C DUF4899 PF16240.5 gi|21227019|ref|NP_632941.1| - 0.046 12.9 0.5 0.94 8.6 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4899) CMD PF02627.20 gi|21227020|ref|NP_632942.1| - 2e-14 53.4 0.0 3.5e-14 52.6 0.0 1.4 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family DUF4599 PF15371.6 gi|21227020|ref|NP_632942.1| - 0.0045 17.5 0.1 0.0082 16.7 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4599) Peptidase_M10 PF00413.24 gi|21227021|ref|NP_632943.1| - 4e-15 56.0 0.0 7.5e-15 55.1 0.0 1.4 1 1 0 1 1 1 1 Matrixin Peptidase_M66 PF10462.9 gi|21227021|ref|NP_632943.1| - 0.0021 17.1 0.1 0.003 16.5 0.1 1.2 1 0 0 1 1 1 1 Peptidase M66 Reprolysin_3 PF13582.6 gi|21227021|ref|NP_632943.1| - 0.0028 18.2 0.0 0.0037 17.8 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.8 gi|21227021|ref|NP_632943.1| - 0.017 13.7 0.0 0.023 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative peptidase family Peptidase_M57 PF12388.8 gi|21227021|ref|NP_632943.1| - 0.027 14.1 0.0 0.03 13.9 0.0 1.2 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Astacin PF01400.24 gi|21227021|ref|NP_632943.1| - 0.1 12.2 0.1 0.28 10.8 0.0 1.7 2 0 0 2 2 2 0 Astacin (Peptidase family M12A) Peptidase_M54 PF07998.11 gi|21227021|ref|NP_632943.1| - 0.11 12.5 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M54 Reprolysin_5 PF13688.6 gi|21227021|ref|NP_632943.1| - 0.18 12.0 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 NUDIX PF00293.28 gi|21227022|ref|NP_632944.1| - 1.2e-20 73.9 0.0 1.4e-20 73.6 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|21227022|ref|NP_632944.1| - 1.9e-07 31.0 0.0 2.2e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain AFOR_C PF01314.18 gi|21227023|ref|NP_632945.1| - 2.1e-90 303.5 0.0 4.8e-90 302.3 0.0 1.6 1 1 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|21227023|ref|NP_632945.1| - 1.7e-62 210.8 2.2 2.4e-62 210.3 2.2 1.2 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain eIF-5a PF01287.20 gi|21227024|ref|NP_632946.1| - 7.4e-07 29.2 0.3 7.4e-07 29.2 0.3 1.6 2 0 0 2 2 2 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|21227024|ref|NP_632946.1| - 7.7e-05 22.6 0.1 0.00015 21.7 0.1 1.5 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain Arginase PF00491.21 gi|21227025|ref|NP_632947.1| - 5.9e-78 262.2 0.0 6.7e-78 262.0 0.0 1.0 1 0 0 1 1 1 1 Arginase family DUF150_C PF17384.2 gi|21227027|ref|NP_632949.1| - 0.048 13.8 0.0 0.053 13.6 0.0 1.1 1 0 0 1 1 1 0 RimP C-terminal SH3 domain DUF4277 PF14104.6 gi|21227028|ref|NP_632950.1| - 2.4e-38 130.8 0.0 5.2e-38 129.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|21227028|ref|NP_632950.1| - 2.4e-11 43.7 0.3 1.5e-10 41.1 0.3 2.0 1 1 0 1 1 1 1 Transposase DDE domain ArgoMid PF16487.5 gi|21227028|ref|NP_632950.1| - 0.13 12.5 0.2 7.5 6.9 0.0 2.9 3 0 0 3 3 3 0 Mid domain of argonaute HTH_3 PF01381.22 gi|21227029|ref|NP_632951.1| - 5.3e-15 55.2 0.0 5.9e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|21227029|ref|NP_632951.1| - 2.4e-09 37.0 0.1 2.7e-09 36.9 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|21227029|ref|NP_632951.1| - 3.8e-09 36.7 0.0 4.4e-09 36.6 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|21227029|ref|NP_632951.1| - 4.3e-06 27.1 0.0 4.7e-06 26.9 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.16 gi|21227029|ref|NP_632951.1| - 0.00027 20.4 0.0 0.0004 19.8 0.0 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|21227029|ref|NP_632951.1| - 0.0017 18.3 0.0 0.0028 17.6 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|21227029|ref|NP_632951.1| - 0.0038 17.1 0.0 0.0061 16.5 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_25 PF13413.6 gi|21227029|ref|NP_632951.1| - 0.0062 16.4 0.0 0.0081 16.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|21227029|ref|NP_632951.1| - 0.034 13.7 0.0 0.054 13.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding YdaS_antitoxin PF15943.5 gi|21227029|ref|NP_632951.1| - 0.059 13.2 0.0 0.071 13.0 0.0 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT MarR_2 PF12802.7 gi|21227029|ref|NP_632951.1| - 0.067 13.1 0.0 0.093 12.6 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_CodY PF08222.11 gi|21227029|ref|NP_632951.1| - 0.13 11.8 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 CodY helix-turn-helix domain DUF2178 PF09946.9 gi|21227030|ref|NP_632952.1| - 9.7e-30 102.9 3.7 1.1e-29 102.7 3.7 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) RseC_MucC PF04246.12 gi|21227030|ref|NP_632952.1| - 0.046 13.7 0.6 0.046 13.7 0.6 1.9 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC RII_binding_1 PF10522.9 gi|21227030|ref|NP_632952.1| - 0.58 10.5 2.2 16 6.0 0.3 2.4 2 0 0 2 2 2 0 RII binding domain UbiA PF01040.18 gi|21227030|ref|NP_632952.1| - 4 6.6 14.1 31 3.8 5.9 2.0 1 1 0 1 1 1 0 UbiA prenyltransferase family DUF2244 PF10003.9 gi|21227030|ref|NP_632952.1| - 4.1 7.1 10.7 1.1 8.9 2.0 2.6 1 1 1 2 2 2 0 Integral membrane protein (DUF2244) Na_H_Exchanger PF00999.21 gi|21227031|ref|NP_632953.1| - 8.6e-64 215.7 53.5 1.3e-63 215.1 53.5 1.2 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|21227031|ref|NP_632953.1| - 1.9e-18 66.8 0.2 3.5e-18 65.9 0.2 1.5 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|21227031|ref|NP_632953.1| - 3e-12 46.2 0.0 8.6e-12 44.7 0.0 1.9 1 0 0 1 1 1 1 TrkA-C domain P-II PF00543.22 gi|21227032|ref|NP_632954.1| - 0.00015 22.3 0.4 0.0002 21.9 0.4 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF1538 PF07556.11 gi|21227033|ref|NP_632955.1| - 4.2e-69 232.1 21.1 4.9e-69 231.8 21.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1538) DUF4153 PF13687.6 gi|21227033|ref|NP_632955.1| - 0.0078 15.9 2.3 0.0078 15.9 2.3 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4153) COX7a PF02238.15 gi|21227033|ref|NP_632955.1| - 0.15 12.5 0.6 0.15 12.5 0.6 3.2 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VII Ribophorin_II PF05817.14 gi|21227033|ref|NP_632955.1| - 0.19 10.2 4.8 0.29 9.7 4.8 1.1 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II DUF1538 PF07556.11 gi|21227034|ref|NP_632956.1| - 1.7e-68 230.1 26.1 1.9e-68 229.9 26.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1538) Na_H_Exchanger PF00999.21 gi|21227035|ref|NP_632957.1| - 4.1e-58 197.0 60.9 5.9e-58 196.5 60.9 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|21227035|ref|NP_632957.1| - 2.9e-23 82.3 2.3 3.4e-23 82.1 1.0 1.8 2 0 0 2 2 2 1 TrkA-N domain TrkA_C PF02080.21 gi|21227035|ref|NP_632957.1| - 1.3e-14 53.7 0.6 3.4e-14 52.4 0.2 2.0 2 0 0 2 2 2 1 TrkA-C domain AlaDh_PNT_C PF01262.21 gi|21227035|ref|NP_632957.1| - 0.0074 15.6 0.5 0.039 13.2 0.8 1.9 1 1 1 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|21227035|ref|NP_632957.1| - 0.036 14.0 0.4 0.06 13.2 0.4 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF4147 PF13660.6 gi|21227035|ref|NP_632957.1| - 0.06 12.9 0.1 0.12 11.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4147) LAM_C PF12544.8 gi|21227036|ref|NP_632958.1| - 2.2e-35 121.6 0.0 3.7e-35 120.9 0.0 1.4 1 0 0 1 1 1 1 Lysine-2,3-aminomutase Radical_SAM PF04055.21 gi|21227036|ref|NP_632958.1| - 1.6e-07 31.9 0.6 9.5e-07 29.3 0.1 2.3 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|21227036|ref|NP_632958.1| - 8.5e-05 22.7 1.8 0.028 14.5 0.0 3.0 3 1 1 4 4 4 2 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|21227036|ref|NP_632958.1| - 0.00028 21.2 0.9 0.0013 19.0 0.0 2.3 3 0 0 3 3 3 1 4Fe-4S single cluster domain DUF5561 PF17716.1 gi|21227036|ref|NP_632958.1| - 0.043 13.1 0.0 0.082 12.2 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5561) Acetyltransf_1 PF00583.25 gi|21227037|ref|NP_632959.1| - 4.1e-05 23.8 0.0 7.9e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|21227037|ref|NP_632959.1| - 0.0013 18.7 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|21227037|ref|NP_632959.1| - 0.0046 17.1 0.0 0.008 16.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|21227037|ref|NP_632959.1| - 0.011 15.8 0.0 0.074 13.1 0.0 2.1 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|21227037|ref|NP_632959.1| - 0.12 13.0 0.0 0.25 12.0 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain ADH_zinc_N_2 PF13602.6 gi|21227037|ref|NP_632959.1| - 0.19 12.8 0.1 30 5.6 0.1 2.9 3 0 0 3 3 3 0 Zinc-binding dehydrogenase T2SSF PF00482.23 gi|21227039|ref|NP_632961.1| - 2.3e-36 124.5 6.3 6.3e-20 71.4 0.0 3.0 3 0 0 3 3 3 2 Type II secretion system (T2SS), protein F Orf78 PF06024.12 gi|21227039|ref|NP_632961.1| - 0.037 14.3 2.8 0.068 13.5 0.1 2.6 2 0 0 2 2 2 0 Orf78 (ac78) TRAP-gamma PF07074.12 gi|21227039|ref|NP_632961.1| - 0.41 10.2 3.7 0.46 10.0 0.2 2.7 3 0 0 3 3 3 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DUF1129 PF06570.11 gi|21227039|ref|NP_632961.1| - 0.86 9.0 5.4 3 7.3 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1129) Sigma_reg_N PF13800.6 gi|21227039|ref|NP_632961.1| - 4.1 7.8 8.3 0.34 11.2 0.2 3.2 3 0 0 3 3 3 0 Sigma factor regulator N-terminal Baculo_11_kDa PF06143.11 gi|21227039|ref|NP_632961.1| - 7.1 6.3 7.9 11 5.7 0.5 3.5 3 0 0 3 3 3 0 Baculovirus 11 kDa family T2SSE PF00437.20 gi|21227040|ref|NP_632962.1| - 1.4e-42 145.7 0.0 2.1e-42 145.0 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_23 PF13476.6 gi|21227040|ref|NP_632962.1| - 0.076 13.5 0.9 0.32 11.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain PP2C_C PF07830.13 gi|21227040|ref|NP_632962.1| - 0.12 12.9 0.3 0.42 11.1 0.1 2.1 2 0 0 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain AAA_29 PF13555.6 gi|21227040|ref|NP_632962.1| - 0.14 11.9 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATPase PF06745.13 gi|21227041|ref|NP_632963.1| - 1.4e-46 158.7 0.0 1.6e-46 158.5 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|21227041|ref|NP_632963.1| - 8.1e-06 25.5 0.2 3.2e-05 23.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain RecA PF00154.21 gi|21227041|ref|NP_632963.1| - 8.3e-06 25.4 0.1 1.7e-05 24.4 0.0 1.5 2 0 0 2 2 2 1 recA bacterial DNA recombination protein NTPase_1 PF03266.15 gi|21227041|ref|NP_632963.1| - 3.6e-05 23.7 0.4 0.00012 22.0 0.4 1.7 1 1 0 1 1 1 1 NTPase GvpD PF07088.11 gi|21227041|ref|NP_632963.1| - 3.7e-05 22.5 0.0 0.00071 18.3 0.0 2.1 2 0 0 2 2 2 1 GvpD gas vesicle protein IstB_IS21 PF01695.17 gi|21227041|ref|NP_632963.1| - 0.001 18.9 0.2 0.0034 17.2 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein DnaB_C PF03796.15 gi|21227041|ref|NP_632963.1| - 0.0013 18.1 0.0 0.0016 17.8 0.0 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain PAXNEB PF05625.11 gi|21227041|ref|NP_632963.1| - 0.0018 17.5 0.0 0.0028 16.9 0.0 1.2 1 0 0 1 1 1 1 PAXNEB protein MORN_2 PF07661.13 gi|21227041|ref|NP_632963.1| - 0.0041 17.2 0.1 0.0099 16.0 0.1 1.6 1 0 0 1 1 1 1 MORN repeat variant AAA_24 PF13479.6 gi|21227041|ref|NP_632963.1| - 0.0049 16.6 0.8 0.022 14.5 0.8 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|21227041|ref|NP_632963.1| - 0.0056 17.1 0.0 0.0064 16.9 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|21227041|ref|NP_632963.1| - 0.0059 16.9 0.4 0.016 15.5 0.4 1.8 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|21227041|ref|NP_632963.1| - 0.0085 15.4 0.1 0.013 14.7 0.1 1.4 1 0 0 1 1 1 1 Rad51 T2SSE PF00437.20 gi|21227041|ref|NP_632963.1| - 0.0091 15.1 0.0 0.014 14.5 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein TsaE PF02367.17 gi|21227041|ref|NP_632963.1| - 0.015 15.3 0.3 0.03 14.3 0.2 1.5 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 gi|21227041|ref|NP_632963.1| - 0.015 15.0 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain SRP54 PF00448.22 gi|21227041|ref|NP_632963.1| - 0.022 14.4 0.4 0.062 12.9 0.2 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain TIP49 PF06068.13 gi|21227041|ref|NP_632963.1| - 0.031 13.5 0.0 0.043 13.0 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_19 PF13245.6 gi|21227041|ref|NP_632963.1| - 0.034 14.5 0.1 0.067 13.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|21227041|ref|NP_632963.1| - 0.038 13.2 0.0 0.044 13.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 gi|21227041|ref|NP_632963.1| - 0.041 13.9 0.0 0.056 13.4 0.0 1.2 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_29 PF13555.6 gi|21227041|ref|NP_632963.1| - 0.045 13.5 0.1 0.11 12.2 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|21227041|ref|NP_632963.1| - 0.064 13.7 0.4 0.17 12.4 0.2 1.6 2 0 0 2 2 2 0 AAA domain DEAD PF00270.29 gi|21227041|ref|NP_632963.1| - 0.068 12.9 0.0 0.094 12.5 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase TBSV_P22 PF03558.13 gi|21227041|ref|NP_632963.1| - 0.13 11.7 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 TBSV core protein P21/P22 AAA_7 PF12775.7 gi|21227041|ref|NP_632963.1| - 0.15 11.6 0.1 0.25 10.8 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_14 PF13173.6 gi|21227041|ref|NP_632963.1| - 0.15 12.1 0.1 0.55 10.3 0.1 2.1 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|21227041|ref|NP_632963.1| - 0.18 10.7 0.1 0.31 9.9 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain CbiA PF01656.23 gi|21227041|ref|NP_632963.1| - 0.23 11.5 0.4 0.62 10.1 0.4 1.7 1 1 1 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.6 gi|21227041|ref|NP_632963.1| - 0.25 11.0 0.1 0.39 10.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain RACo_C_ter PF14574.6 gi|21227042|ref|NP_632964.1| - 1.1e-73 247.5 0.8 1.3e-72 244.0 1.5 2.1 2 0 0 2 2 2 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|21227042|ref|NP_632964.1| - 6.3e-10 39.0 0.1 1.8e-09 37.5 0.0 1.8 2 0 0 2 2 2 1 RACo middle region Fer4_9 PF13187.6 gi|21227042|ref|NP_632964.1| - 1.8e-05 24.8 11.2 3.3e-05 24.0 11.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227042|ref|NP_632964.1| - 3.5e-05 24.3 11.6 7.5e-05 23.2 11.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227042|ref|NP_632964.1| - 0.00012 22.9 12.2 0.002 19.0 3.6 2.7 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|21227042|ref|NP_632964.1| - 0.00014 21.9 11.4 0.00028 20.9 11.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21227042|ref|NP_632964.1| - 0.00086 19.0 3.2 0.00086 19.0 3.2 2.6 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21227042|ref|NP_632964.1| - 0.0034 17.4 13.8 0.046 13.8 4.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|21227042|ref|NP_632964.1| - 0.0036 17.4 5.7 0.0068 16.5 5.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21227042|ref|NP_632964.1| - 0.004 17.2 14.6 0.017 15.2 14.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227042|ref|NP_632964.1| - 0.0044 17.0 12.8 0.12 12.5 3.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21227042|ref|NP_632964.1| - 0.045 14.2 3.9 0.23 11.9 0.1 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227042|ref|NP_632964.1| - 0.099 13.2 11.0 0.64 10.7 1.2 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21227042|ref|NP_632964.1| - 0.63 11.1 16.1 4.8 8.4 3.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21227042|ref|NP_632964.1| - 3.9 7.7 11.6 19 5.5 11.6 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21227042|ref|NP_632964.1| - 4.2 8.0 13.8 0.5 11.0 2.5 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Lyase_1 PF00206.20 gi|21227043|ref|NP_632965.1| - 9.8e-55 186.1 1.0 1.3e-54 185.7 1.0 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|21227043|ref|NP_632965.1| - 1.4e-19 70.4 0.1 4.9e-19 68.7 0.0 2.0 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus Ribosomal_L40e PF01020.17 gi|298205308|ref|YP_003717786.1| - 1.1e-06 28.4 6.9 1.2e-06 28.2 6.9 1.1 1 0 0 1 1 1 1 Ribosomal L40e family zinc_ribbon_2 PF13240.6 gi|298205308|ref|YP_003717786.1| - 0.00077 19.1 1.4 0.0011 18.6 1.4 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|298205308|ref|YP_003717786.1| - 0.0015 18.5 0.9 0.0016 18.4 0.9 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-RanBP PF00641.18 gi|298205308|ref|YP_003717786.1| - 0.0053 16.0 4.4 0.0074 15.6 4.4 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others zf-ribbon_3 PF13248.6 gi|298205308|ref|YP_003717786.1| - 0.016 14.6 2.5 0.02 14.3 2.5 1.2 1 0 0 1 1 1 0 zinc-ribbon domain HypA PF01155.19 gi|298205308|ref|YP_003717786.1| - 0.026 14.5 2.0 0.028 14.4 2.0 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_RNApol_7kD PF03604.13 gi|298205308|ref|YP_003717786.1| - 0.061 13.0 6.7 0.11 12.1 6.7 1.5 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.10 gi|298205308|ref|YP_003717786.1| - 0.22 11.7 3.7 13 5.9 0.2 2.1 1 1 1 2 2 2 0 Zinc ribbon domain PcrB PF01884.17 gi|21227045|ref|NP_632967.1| - 4.1e-66 222.7 1.1 4.8e-66 222.5 1.1 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|21227045|ref|NP_632967.1| - 3.5e-06 26.7 0.2 5.5e-06 26.0 0.2 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein NanE PF04131.14 gi|21227045|ref|NP_632967.1| - 0.04 13.1 1.2 0.19 10.9 0.3 2.0 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase CsgG PF03783.14 gi|21227045|ref|NP_632967.1| - 0.071 12.4 0.1 0.12 11.6 0.1 1.3 1 0 0 1 1 1 0 Curli production assembly/transport component CsgG ThiG PF05690.14 gi|21227045|ref|NP_632967.1| - 0.083 12.2 4.0 1.3 8.3 1.5 2.1 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG Ribul_P_3_epim PF00834.19 gi|21227045|ref|NP_632967.1| - 0.096 12.1 0.3 0.19 11.1 0.3 1.5 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family ABC_tran PF00005.27 gi|21227046|ref|NP_632968.1| - 5.6e-52 175.9 0.0 2e-26 93.2 0.0 2.5 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|21227046|ref|NP_632968.1| - 3.2e-09 37.0 3.0 0.0068 16.3 0.1 4.2 3 1 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21227046|ref|NP_632968.1| - 3.9e-08 32.9 0.4 0.0041 16.8 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|21227046|ref|NP_632968.1| - 9.7e-08 32.1 0.2 0.0098 15.8 0.0 2.6 2 1 0 2 2 2 2 RsgA GTPase AAA_23 PF13476.6 gi|21227046|ref|NP_632968.1| - 3.8e-07 30.8 1.4 0.03 14.8 0.0 2.8 2 1 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|21227046|ref|NP_632968.1| - 2e-06 28.1 2.7 0.086 13.1 0.0 3.8 4 0 0 4 4 4 2 AAA domain TniB PF05621.11 gi|21227046|ref|NP_632968.1| - 2.2e-06 27.2 0.6 0.00074 19.0 0.0 3.7 4 0 0 4 4 4 1 Bacterial TniB protein AAA_30 PF13604.6 gi|21227046|ref|NP_632968.1| - 7.6e-06 25.8 0.6 0.13 12.0 0.1 3.1 4 0 0 4 4 3 2 AAA domain AAA_16 PF13191.6 gi|21227046|ref|NP_632968.1| - 1.5e-05 25.4 0.1 0.15 12.5 0.1 2.6 2 0 0 2 2 2 2 AAA ATPase domain PRK PF00485.18 gi|21227046|ref|NP_632968.1| - 5.8e-05 22.9 0.1 0.28 10.9 0.0 2.4 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family SMC_N PF02463.19 gi|21227046|ref|NP_632968.1| - 0.00011 21.7 0.0 4.1 6.8 0.0 4.0 3 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|21227046|ref|NP_632968.1| - 0.00019 21.2 0.7 0.028 14.1 0.0 2.8 2 1 0 3 3 3 1 AAA ATPase domain NB-ARC PF00931.22 gi|21227046|ref|NP_632968.1| - 0.00022 20.5 0.1 0.35 10.0 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain Rad17 PF03215.15 gi|21227046|ref|NP_632968.1| - 0.0005 20.0 0.0 0.55 10.1 0.0 2.7 3 0 0 3 3 2 1 Rad17 P-loop domain SbcCD_C PF13558.6 gi|21227046|ref|NP_632968.1| - 0.00094 19.4 0.2 0.46 10.7 0.0 3.1 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA PF00004.29 gi|21227046|ref|NP_632968.1| - 0.0035 17.8 0.8 4.3 7.8 0.0 3.5 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|21227046|ref|NP_632968.1| - 0.0037 17.8 0.4 3.9 8.0 0.1 3.0 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 gi|21227046|ref|NP_632968.1| - 0.0039 17.2 0.4 1.1 9.3 0.1 3.0 3 0 0 3 3 2 1 50S ribosome-binding GTPase ATPase_2 PF01637.18 gi|21227046|ref|NP_632968.1| - 0.0045 16.9 1.4 1.7 8.5 0.0 3.2 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea AAA_33 PF13671.6 gi|21227046|ref|NP_632968.1| - 0.0045 17.1 0.1 0.94 9.6 0.0 2.7 3 0 0 3 3 2 1 AAA domain MobB PF03205.14 gi|21227046|ref|NP_632968.1| - 0.0097 15.8 0.4 5.5 6.9 0.1 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_25 PF13481.6 gi|21227046|ref|NP_632968.1| - 0.012 15.2 0.2 20 4.7 0.1 3.6 4 0 0 4 4 4 0 AAA domain AAA_24 PF13479.6 gi|21227046|ref|NP_632968.1| - 0.013 15.2 1.4 1.3 8.7 0.2 2.6 2 0 0 2 2 2 0 AAA domain APS_kinase PF01583.20 gi|21227046|ref|NP_632968.1| - 0.016 15.1 0.1 4.5 7.2 0.0 2.6 2 0 0 2 2 2 0 Adenylylsulphate kinase NTPase_1 PF03266.15 gi|21227046|ref|NP_632968.1| - 0.022 14.6 1.2 1.5 8.7 0.1 2.6 2 0 0 2 2 2 0 NTPase Mg_chelatase PF01078.21 gi|21227046|ref|NP_632968.1| - 0.024 14.0 0.2 0.78 9.1 0.0 2.7 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|21227046|ref|NP_632968.1| - 0.029 14.6 1.1 3.4 7.9 0.1 3.1 3 1 0 3 3 3 0 AAA domain G-alpha PF00503.20 gi|21227046|ref|NP_632968.1| - 0.03 13.5 0.3 2.8 7.0 0.0 2.5 2 1 0 2 2 2 0 G-protein alpha subunit AAA_14 PF13173.6 gi|21227046|ref|NP_632968.1| - 0.038 14.0 1.1 27 4.8 0.1 3.5 3 0 0 3 3 3 0 AAA domain cobW PF02492.19 gi|21227046|ref|NP_632968.1| - 0.05 13.2 0.9 2.8 7.5 0.1 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 gi|21227046|ref|NP_632968.1| - 0.058 13.4 0.7 2.2 8.3 0.0 2.8 2 1 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 gi|21227046|ref|NP_632968.1| - 0.06 13.7 0.4 7.4 7.0 0.1 2.5 2 0 0 2 2 2 0 RNA helicase PduV-EutP PF10662.9 gi|21227046|ref|NP_632968.1| - 0.064 13.0 0.1 3.7 7.3 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation IstB_IS21 PF01695.17 gi|21227046|ref|NP_632968.1| - 0.068 12.9 0.1 16 5.2 0.0 3.1 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_5 PF07728.14 gi|21227046|ref|NP_632968.1| - 0.099 12.6 0.8 5 7.1 0.1 3.0 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|21227046|ref|NP_632968.1| - 0.1 12.1 0.1 4.5 6.8 0.1 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region PhoH PF02562.16 gi|21227046|ref|NP_632968.1| - 0.12 11.8 0.0 21 4.5 0.0 2.6 2 0 0 2 2 2 0 PhoH-like protein MeaB PF03308.16 gi|21227046|ref|NP_632968.1| - 0.13 11.2 0.3 0.31 10.0 0.0 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 gi|21227046|ref|NP_632968.1| - 0.13 12.2 4.1 2.7 7.9 0.2 3.1 4 0 0 4 4 2 0 NACHT domain DUF87 PF01935.17 gi|21227046|ref|NP_632968.1| - 0.14 12.3 2.7 5.3 7.1 0.1 2.9 2 1 0 2 2 2 0 Helicase HerA, central domain CheB_methylest PF01339.17 gi|21227046|ref|NP_632968.1| - 0.17 11.6 0.1 1 9.1 0.0 2.1 2 0 0 2 2 2 0 CheB methylesterase FMN_red PF03358.15 gi|21227047|ref|NP_632969.1| - 4.4e-15 55.7 0.0 7.2e-15 55.1 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21227047|ref|NP_632969.1| - 2.9e-07 30.4 0.0 3.5e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavin_Reduct PF01613.18 gi|21227048|ref|NP_632970.1| - 4.2e-18 65.9 0.0 5.5e-18 65.5 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain MacB_PCD PF12704.7 gi|21227049|ref|NP_632971.1| - 1.5e-22 80.9 4.0 3.6e-22 79.7 4.0 1.6 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|21227049|ref|NP_632971.1| - 3.2e-11 43.5 5.7 3.2e-11 43.5 5.7 3.2 3 0 0 3 3 3 2 FtsX-like permease family TMEM141 PF15110.6 gi|21227049|ref|NP_632971.1| - 0.12 13.0 0.1 0.34 11.5 0.1 1.7 1 0 0 1 1 1 0 TMEM141 protein family LptF_LptG PF03739.14 gi|21227049|ref|NP_632971.1| - 1.5 7.6 8.0 0.51 9.1 4.4 2.0 2 0 0 2 2 2 0 Lipopolysaccharide export system permease LptF/LptG HATPase_c PF02518.26 gi|21227050|ref|NP_632972.1| - 1.8e-32 112.1 0.1 7.3e-32 110.2 0.0 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|21227050|ref|NP_632972.1| - 1.1e-17 63.8 0.1 2.7e-16 59.3 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 gi|21227050|ref|NP_632972.1| - 5.5e-05 23.0 0.0 0.00011 22.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MEDS PF14417.6 gi|21227050|ref|NP_632972.1| - 0.00041 20.2 0.0 0.00093 19.1 0.0 1.6 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HATPase_c_2 PF13581.6 gi|21227050|ref|NP_632972.1| - 0.00069 19.6 0.0 0.0015 18.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain NPCBM_assoc PF10633.9 gi|21227051|ref|NP_632973.1| - 6.5e-08 32.7 0.0 0.14 12.5 0.0 3.9 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|21227051|ref|NP_632973.1| - 2.9e-06 27.4 0.9 0.00047 20.4 0.0 3.3 3 2 0 3 3 3 1 CARDB DUF11 PF01345.18 gi|21227051|ref|NP_632973.1| - 0.0003 21.0 2.3 1.6 9.1 0.1 4.2 3 2 0 3 3 3 2 Domain of unknown function DUF11 HERV-K_REC PF15695.5 gi|21227051|ref|NP_632973.1| - 0.17 12.0 0.6 18 5.4 0.2 2.3 2 0 0 2 2 2 0 Rec (regulator of expression encoded by corf) of HERV-K-113 ABC_tran PF00005.27 gi|21227052|ref|NP_632974.1| - 3.9e-35 121.4 0.1 1.6e-34 119.3 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|21227052|ref|NP_632974.1| - 6.8e-07 29.4 0.1 0.035 13.9 0.0 2.4 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21227052|ref|NP_632974.1| - 1.4e-06 27.9 0.2 2.3e-05 24.0 0.0 2.5 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|21227052|ref|NP_632974.1| - 0.00035 20.3 1.0 0.0018 18.0 0.0 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|21227052|ref|NP_632974.1| - 0.0031 17.4 0.0 0.006 16.5 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|21227052|ref|NP_632974.1| - 0.014 15.7 0.0 0.034 14.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|21227052|ref|NP_632974.1| - 0.025 14.7 0.2 0.12 12.4 0.2 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.6 gi|21227052|ref|NP_632974.1| - 0.033 14.6 0.0 0.044 14.2 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 gi|21227052|ref|NP_632974.1| - 0.051 14.1 0.1 0.051 14.1 0.1 1.8 2 0 0 2 2 1 0 AAA domain DUF3987 PF13148.6 gi|21227052|ref|NP_632974.1| - 0.12 11.4 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) RNA_helicase PF00910.22 gi|21227052|ref|NP_632974.1| - 0.17 12.3 0.4 0.8 10.1 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_24 PF13479.6 gi|21227052|ref|NP_632974.1| - 0.18 11.5 0.0 0.44 10.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain MacB_PCD PF12704.7 gi|21227053|ref|NP_632975.1| - 1.4e-25 90.8 1.5 2.5e-25 90.0 1.5 1.4 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|21227053|ref|NP_632975.1| - 5.5e-11 42.8 2.0 5.5e-11 42.8 2.0 3.2 3 0 0 3 3 3 2 FtsX-like permease family DUF4118 PF13493.6 gi|21227053|ref|NP_632975.1| - 5.7 6.8 11.7 15 5.4 6.9 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4118) DUF11 PF01345.18 gi|21227054|ref|NP_632976.1| - 1.5e-07 31.6 1.8 0.0018 18.6 0.1 4.2 3 2 0 3 3 3 2 Domain of unknown function DUF11 CARDB PF07705.11 gi|21227054|ref|NP_632976.1| - 3.4e-07 30.4 3.1 7.8e-05 22.9 0.1 3.1 3 1 0 3 3 3 2 CARDB NPCBM_assoc PF10633.9 gi|21227054|ref|NP_632976.1| - 7.6e-07 29.3 0.0 0.33 11.2 0.0 4.0 3 0 0 3 3 3 3 NPCBM-associated, NEW3 domain of alpha-galactosidase Phage_tube PF04985.14 gi|21227054|ref|NP_632976.1| - 0.13 12.0 0.0 0.38 10.4 0.0 1.7 2 0 0 2 2 2 0 Phage tail tube protein FII PCC_BT PF18140.1 gi|21227054|ref|NP_632976.1| - 0.2 12.0 0.2 0.73 10.2 0.1 2.1 2 1 0 2 2 2 0 Propionyl-coenzyme A carboxylase BT domain WTF PF03303.13 gi|21227054|ref|NP_632976.1| - 0.26 11.0 0.5 0.44 10.2 0.5 1.3 1 0 0 1 1 1 0 WTF protein Pilin PF00114.19 gi|21227054|ref|NP_632976.1| - 0.44 11.5 2.0 0.76 10.7 0.3 2.3 2 0 0 2 2 2 0 Pilin (bacterial filament) Cadherin-like PF12733.7 gi|21227054|ref|NP_632976.1| - 0.51 10.9 6.4 18 6.0 3.0 4.0 1 1 1 3 3 3 0 Cadherin-like beta sandwich domain ABC_tran PF00005.27 gi|21227055|ref|NP_632977.1| - 3.9e-35 121.4 0.0 5e-35 121.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21227055|ref|NP_632977.1| - 1e-07 32.1 0.1 0.005 16.7 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|21227055|ref|NP_632977.1| - 9.8e-06 25.9 0.1 0.00015 22.0 0.1 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|21227055|ref|NP_632977.1| - 1.8e-05 24.3 0.1 0.068 12.6 0.1 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|21227055|ref|NP_632977.1| - 0.00016 21.3 0.0 0.00033 20.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|21227055|ref|NP_632977.1| - 0.00083 19.8 0.0 0.0015 19.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|21227055|ref|NP_632977.1| - 0.0018 18.2 0.1 0.0029 17.5 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 gi|21227055|ref|NP_632977.1| - 0.005 16.6 0.0 0.12 12.1 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|21227055|ref|NP_632977.1| - 0.0077 16.8 0.2 0.015 15.8 0.2 1.4 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|21227055|ref|NP_632977.1| - 0.034 14.2 0.0 0.078 13.1 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_25 PF13481.6 gi|21227055|ref|NP_632977.1| - 0.072 12.7 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|21227055|ref|NP_632977.1| - 0.072 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 gi|21227055|ref|NP_632977.1| - 0.084 12.0 0.0 0.087 12.0 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit ATPase_2 PF01637.18 gi|21227055|ref|NP_632977.1| - 0.088 12.7 0.1 0.6 10.0 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea DUF87 PF01935.17 gi|21227055|ref|NP_632977.1| - 0.1 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain NB-ARC PF00931.22 gi|21227055|ref|NP_632977.1| - 0.1 11.7 0.1 0.19 10.9 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain IstB_IS21 PF01695.17 gi|21227055|ref|NP_632977.1| - 0.13 12.0 0.0 0.27 10.9 0.0 1.5 2 0 0 2 2 2 0 IstB-like ATP binding protein ABC_ATPase PF09818.9 gi|21227055|ref|NP_632977.1| - 0.19 10.4 0.2 7.7 5.2 0.1 2.6 3 0 0 3 3 3 0 Predicted ATPase of the ABC class DUF3987 PF13148.6 gi|21227055|ref|NP_632977.1| - 0.21 10.6 0.0 0.3 10.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) ABC2_membrane PF01061.24 gi|21227057|ref|NP_632979.1| - 1.7e-23 83.2 23.1 1.7e-23 83.2 23.1 2.0 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|21227057|ref|NP_632979.1| - 2.2e-10 40.2 27.7 2.2e-10 40.2 27.7 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|21227058|ref|NP_632980.1| - 7.2e-35 120.5 0.1 1.6e-34 119.3 0.0 1.6 2 0 0 2 2 2 1 ABC transporter DUF4162 PF13732.6 gi|21227058|ref|NP_632980.1| - 6e-14 52.5 0.7 1.9e-13 50.9 0.3 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|21227058|ref|NP_632980.1| - 7.7e-12 45.6 0.5 3.3e-06 27.1 0.0 2.4 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|21227058|ref|NP_632980.1| - 7e-06 26.0 1.1 0.035 13.8 0.2 3.0 2 1 1 3 3 3 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|21227058|ref|NP_632980.1| - 7.6e-05 22.7 0.4 0.00028 20.8 0.1 2.0 2 1 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 gi|21227058|ref|NP_632980.1| - 0.0014 18.3 0.0 0.0027 17.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|21227058|ref|NP_632980.1| - 0.0035 17.9 5.1 0.015 15.8 5.1 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|21227058|ref|NP_632980.1| - 0.0036 16.8 0.4 0.025 14.0 0.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|21227058|ref|NP_632980.1| - 0.012 15.9 0.5 0.062 13.6 0.3 2.2 1 1 1 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|21227058|ref|NP_632980.1| - 0.02 15.4 0.4 0.45 11.1 0.4 2.5 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|21227058|ref|NP_632980.1| - 0.037 13.9 0.0 0.067 13.1 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_16 PF13191.6 gi|21227058|ref|NP_632980.1| - 0.042 14.2 0.0 0.35 11.2 0.0 2.2 2 1 0 2 2 2 0 AAA ATPase domain ACT_4 PF13291.6 gi|21227058|ref|NP_632980.1| - 0.063 13.9 0.4 1.3 9.7 0.0 2.6 2 0 0 2 2 2 0 ACT domain AAA_30 PF13604.6 gi|21227058|ref|NP_632980.1| - 0.082 12.6 0.0 0.2 11.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|21227058|ref|NP_632980.1| - 0.091 12.8 1.7 0.38 10.8 0.1 2.3 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_27 PF13514.6 gi|21227058|ref|NP_632980.1| - 0.13 11.9 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain ILEI PF15711.5 gi|21227058|ref|NP_632980.1| - 0.13 12.7 0.0 0.79 10.2 0.0 2.4 1 1 0 1 1 1 0 Interleukin-like EMT inducer Ammonium_transp PF00909.21 gi|21227059|ref|NP_632981.1| - 9.2e-123 409.8 37.3 1.1e-122 409.6 37.3 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DPM3 PF08285.11 gi|21227059|ref|NP_632981.1| - 0.8 9.9 4.4 5.6 7.2 2.3 3.0 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) P-II PF00543.22 gi|21227060|ref|NP_632982.1| - 4.6e-40 136.3 2.4 5.2e-40 136.2 2.4 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II PBP5_C PF07943.13 gi|21227060|ref|NP_632982.1| - 0.0074 16.5 0.4 0.011 15.9 0.4 1.2 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain OSTbeta PF15048.6 gi|21227061|ref|NP_632983.1| - 0.23 11.6 0.6 3.7 7.7 0.1 2.2 2 0 0 2 2 2 0 Organic solute transporter subunit beta protein HSP20 PF00011.21 gi|21227062|ref|NP_632984.1| - 1.9e-06 28.0 0.3 0.00019 21.5 0.3 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|21227062|ref|NP_632984.1| - 0.0049 16.4 0.0 0.027 14.0 0.0 1.9 1 1 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|21227062|ref|NP_632984.1| - 0.006 17.6 0.2 0.011 16.7 0.1 1.4 1 1 0 1 1 1 1 CS domain HSP20 PF00011.21 gi|21227063|ref|NP_632985.1| - 5.7e-06 26.4 0.2 0.00032 20.8 0.2 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.16 gi|21227063|ref|NP_632985.1| - 0.0056 17.7 0.0 0.0069 17.4 0.0 1.2 1 0 0 1 1 1 1 CS domain RIP PF00161.19 gi|21227063|ref|NP_632985.1| - 0.024 14.2 0.0 0.025 14.2 0.0 1.1 1 0 0 1 1 1 0 Ribosome inactivating protein DUF1059 PF06348.11 gi|21227064|ref|NP_632986.1| - 1.1e-10 41.6 2.6 1.4e-10 41.2 2.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) DUF832 PF05734.11 gi|21227064|ref|NP_632986.1| - 0.0098 15.4 0.2 0.011 15.3 0.2 1.0 1 0 0 1 1 1 1 Herpesvirus protein of unknown function (DUF832) PhosphMutase PF10143.9 gi|21227064|ref|NP_632986.1| - 0.013 15.4 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TspO_MBR PF03073.15 gi|21227065|ref|NP_632987.1| - 1.6e-46 157.8 21.3 1.8e-46 157.5 21.3 1.0 1 0 0 1 1 1 1 TspO/MBR family Voltage_CLC PF00654.20 gi|21227065|ref|NP_632987.1| - 0.44 9.7 7.2 0.53 9.5 7.2 1.2 1 0 0 1 1 1 0 Voltage gated chloride channel TctB PF07331.11 gi|21227065|ref|NP_632987.1| - 1 9.6 13.2 1.4 9.2 13.2 1.2 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Gln-synt_C PF00120.24 gi|21227066|ref|NP_632988.1| - 7.5e-139 462.5 0.0 8.8e-139 462.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|21227066|ref|NP_632988.1| - 1e-28 98.9 0.0 2.2e-28 97.8 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 gi|21227066|ref|NP_632988.1| - 6.2e-06 26.0 0.0 3.6e-05 23.5 0.0 2.1 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain Bmp PF02608.14 gi|21227066|ref|NP_632988.1| - 0.2 10.6 0.0 0.34 9.8 0.0 1.3 1 0 0 1 1 1 0 ABC transporter substrate-binding protein PnrA-like GATase_6 PF13522.6 gi|21227068|ref|NP_632990.1| - 2e-11 44.2 0.0 2.6e-09 37.4 0.0 2.2 2 0 0 2 2 2 2 Glutamine amidotransferase domain GATase_2 PF00310.21 gi|21227068|ref|NP_632990.1| - 5.6e-08 31.9 0.5 2.5e-06 26.5 0.3 2.2 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_7 PF13537.6 gi|21227068|ref|NP_632990.1| - 7.7e-06 25.8 0.0 0.16 11.9 0.0 2.2 2 0 0 2 2 2 2 Glutamine amidotransferase domain Glu_synthase PF01645.17 gi|21227069|ref|NP_632991.1| - 2.1e-136 454.9 0.0 2.8e-136 454.5 0.0 1.1 1 0 0 1 1 1 1 Conserved region in glutamate synthase Glu_syn_central PF04898.14 gi|21227069|ref|NP_632991.1| - 4e-14 52.8 0.0 1.5e-06 27.9 0.0 2.3 2 0 0 2 2 2 2 Glutamate synthase central domain FMN_dh PF01070.18 gi|21227069|ref|NP_632991.1| - 8e-10 38.3 6.6 1.4e-07 30.9 3.4 3.0 3 0 0 3 3 3 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|21227069|ref|NP_632991.1| - 1.1e-09 37.8 5.9 3e-07 29.8 5.9 2.9 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Fer4_10 PF13237.6 gi|21227069|ref|NP_632991.1| - 3.9e-09 36.5 15.3 7.7e-06 25.9 12.3 2.8 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227069|ref|NP_632991.1| - 4.5e-08 33.5 15.6 0.00017 22.1 13.3 3.3 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227069|ref|NP_632991.1| - 5.1e-08 33.0 15.2 5.6e-07 29.6 10.7 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21227069|ref|NP_632991.1| - 8.4e-08 32.0 21.6 3.3e-05 23.8 2.3 3.3 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4 PF00037.27 gi|21227069|ref|NP_632991.1| - 2.1e-07 30.4 21.9 1.3e-05 24.8 1.0 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain NMO PF03060.15 gi|21227069|ref|NP_632991.1| - 1.1e-06 28.2 7.9 3.4e-06 26.7 7.9 1.8 1 1 0 1 1 1 1 Nitronate monooxygenase Fer4_16 PF13484.6 gi|21227069|ref|NP_632991.1| - 3.2e-06 28.0 10.6 0.0011 19.9 0.3 3.3 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|21227069|ref|NP_632991.1| - 3.3e-06 27.1 9.3 3.3e-06 27.1 9.3 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227069|ref|NP_632991.1| - 8.6e-06 25.5 20.5 0.0082 16.2 1.6 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain DHO_dh PF01180.21 gi|21227069|ref|NP_632991.1| - 1.1e-05 24.8 0.5 0.00021 20.6 0.4 2.2 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Fer4_8 PF13183.6 gi|21227069|ref|NP_632991.1| - 9.5e-05 22.8 13.3 0.18 12.3 1.4 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain His_biosynth PF00977.21 gi|21227069|ref|NP_632991.1| - 0.002 17.6 0.3 0.0038 16.7 0.3 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein Fer4_17 PF13534.6 gi|21227069|ref|NP_632991.1| - 0.0075 16.8 15.8 0.82 10.3 1.9 3.3 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21227069|ref|NP_632991.1| - 0.017 15.3 5.7 0.017 15.3 5.7 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21227069|ref|NP_632991.1| - 0.63 10.9 15.2 0.22 12.4 1.0 3.1 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21227069|ref|NP_632991.1| - 1.3 9.6 20.6 0.14 12.7 1.1 3.2 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I GXGXG PF01493.19 gi|21227070|ref|NP_632992.1| - 1.4e-34 119.3 10.2 1.7e-34 119.1 10.2 1.1 1 0 0 1 1 1 1 GXGXG motif FrhB_FdhB_C PF04432.13 gi|21227071|ref|NP_632993.1| - 1.2e-34 119.4 0.0 1.9e-34 118.7 0.0 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|21227071|ref|NP_632993.1| - 6.6e-19 67.8 0.0 1.2e-18 67.0 0.0 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_6 PF12837.7 gi|21227071|ref|NP_632993.1| - 3.8e-08 33.1 11.7 4.6e-06 26.5 1.8 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|21227071|ref|NP_632993.1| - 1.3e-07 31.2 2.8 1.3e-07 31.2 2.8 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21227071|ref|NP_632993.1| - 1.8e-06 28.0 8.6 1.8e-06 28.0 8.6 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227071|ref|NP_632993.1| - 4.3e-05 24.0 9.0 4.3e-05 24.0 9.0 1.9 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227071|ref|NP_632993.1| - 0.00016 21.8 19.7 0.00086 19.4 10.1 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227071|ref|NP_632993.1| - 0.00033 20.6 2.0 0.00033 20.6 2.0 3.3 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21227071|ref|NP_632993.1| - 0.00098 19.6 4.4 0.074 13.6 0.1 2.7 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227071|ref|NP_632993.1| - 0.001 19.4 13.6 0.005 17.2 0.9 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21227071|ref|NP_632993.1| - 0.0034 18.3 14.1 0.29 12.1 12.2 3.0 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|21227071|ref|NP_632993.1| - 0.018 15.5 8.5 0.47 10.9 2.2 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain DUF1344 PF07076.11 gi|21227071|ref|NP_632993.1| - 0.021 14.7 0.0 0.048 13.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1344) Fer4_18 PF13746.6 gi|21227071|ref|NP_632993.1| - 0.057 13.6 3.3 1.8 8.8 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21227071|ref|NP_632993.1| - 0.083 13.6 1.1 1.3 9.8 0.3 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|21227071|ref|NP_632993.1| - 0.15 12.9 5.5 0.18 12.7 0.2 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21227071|ref|NP_632993.1| - 0.21 12.1 7.2 1.3 9.6 1.1 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_21 PF14697.6 gi|21227071|ref|NP_632993.1| - 1.1 9.4 16.5 0.11 12.7 2.7 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21227071|ref|NP_632993.1| - 1.7 9.7 24.3 0.28 12.2 6.4 3.2 4 0 0 4 4 2 0 4Fe-4S binding domain Zn_dep_PLPC PF00882.18 gi|21227073|ref|NP_632995.1| - 0.014 15.4 3.8 0.021 14.8 3.8 1.3 1 0 0 1 1 1 0 Zinc dependent phospholipase C ANAPC3 PF12895.7 gi|21227073|ref|NP_632995.1| - 0.094 13.0 0.7 0.33 11.2 0.7 2.0 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 VSG_B PF13206.6 gi|21227075|ref|NP_632997.1| - 0.0041 16.4 0.1 0.33 10.1 0.0 2.2 2 0 0 2 2 2 2 Trypanosomal VSG domain GST_N_2 PF13409.6 gi|21227075|ref|NP_632997.1| - 0.057 13.7 0.0 0.43 10.9 0.0 2.3 3 0 0 3 3 3 0 Glutathione S-transferase, N-terminal domain Unstab_antitox PF09720.10 gi|21227075|ref|NP_632997.1| - 0.074 13.1 0.1 0.31 11.1 0.0 2.0 2 0 0 2 2 2 0 Putative addiction module component Peptidase_M24 PF00557.24 gi|21227076|ref|NP_632998.1| - 6.7e-40 137.0 0.0 9e-40 136.6 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|21227076|ref|NP_632998.1| - 4e-10 40.4 0.0 6.5e-10 39.8 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain CNP_C_terminal PF17839.1 gi|21227076|ref|NP_632998.1| - 0.1 13.3 0.0 0.2 12.4 0.0 1.4 1 0 0 1 1 1 0 C-terminal domain of cyclic nucleotide phosphodiesterase DUF2284 PF10050.9 gi|21227077|ref|NP_632999.1| - 9.2e-45 152.3 0.3 1.1e-44 152.1 0.3 1.0 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) Peptidase_S8 PF00082.22 gi|21227078|ref|NP_633000.1| - 1.5e-18 67.1 3.0 7.8e-14 51.6 0.0 2.4 3 0 0 3 3 3 2 Subtilase family F420_oxidored PF03807.17 gi|21227079|ref|NP_633001.1| - 2.1e-17 63.5 0.2 4.5e-17 62.4 0.2 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DUF5633 PF18656.1 gi|21227079|ref|NP_633001.1| - 0.0033 17.3 0.9 0.076 12.9 0.1 2.5 2 0 0 2 2 2 1 Family of unknown function (DUF5633) Sacchrp_dh_NADP PF03435.18 gi|21227079|ref|NP_633001.1| - 0.0089 16.3 0.1 0.016 15.4 0.1 1.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Ldh_1_N PF00056.23 gi|21227079|ref|NP_633001.1| - 0.018 15.2 0.1 0.035 14.2 0.1 1.4 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|21227079|ref|NP_633001.1| - 0.033 14.2 0.8 0.077 13.1 0.1 1.8 2 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DXP_reductoisom PF02670.16 gi|21227079|ref|NP_633001.1| - 0.15 12.7 2.3 5.4 7.8 0.0 2.5 2 1 0 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase DUF4329 PF14220.6 gi|21227079|ref|NP_633001.1| - 0.17 11.9 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4329) KR PF08659.10 gi|21227079|ref|NP_633001.1| - 0.25 11.2 1.2 0.26 11.2 0.2 1.5 2 0 0 2 2 2 0 KR domain Fer4_8 PF13183.6 gi|21227081|ref|NP_633003.1| - 4.2e-13 49.5 7.2 8.4e-13 48.6 7.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21227081|ref|NP_633003.1| - 1.9e-09 37.9 7.1 3e-09 37.3 7.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227081|ref|NP_633003.1| - 3.1e-09 36.9 8.0 5.9e-09 35.9 8.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21227081|ref|NP_633003.1| - 3e-08 33.7 8.6 7.2e-08 32.4 8.6 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227081|ref|NP_633003.1| - 7.4e-07 29.7 9.5 3e-06 27.7 9.7 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21227081|ref|NP_633003.1| - 1.3e-05 25.2 4.6 2.3e-05 24.4 4.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227081|ref|NP_633003.1| - 3.4e-05 23.7 10.7 0.00089 19.2 1.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|21227081|ref|NP_633003.1| - 0.00029 20.5 12.4 0.025 14.4 2.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21227081|ref|NP_633003.1| - 0.00069 19.9 9.5 0.0074 16.7 2.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21227081|ref|NP_633003.1| - 0.0047 17.8 17.9 0.15 13.1 3.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21227081|ref|NP_633003.1| - 0.042 14.8 12.7 0.53 11.3 12.8 2.3 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|21227081|ref|NP_633003.1| - 0.33 11.2 7.7 0.56 10.4 0.4 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21227081|ref|NP_633003.1| - 0.55 10.4 10.9 0.7 10.1 1.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain CCG PF02754.16 gi|21227082|ref|NP_633004.1| - 8.4e-32 109.2 5.0 1e-18 67.3 1.3 2.3 2 0 0 2 2 2 2 Cysteine-rich domain DUF1284 PF06935.11 gi|21227083|ref|NP_633005.1| - 3e-24 85.4 0.3 3.9e-24 85.0 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1284) Whib PF02467.16 gi|21227083|ref|NP_633005.1| - 0.0014 19.2 1.3 1.9 9.1 0.0 2.3 2 0 0 2 2 2 2 Transcription factor WhiB DUF5318 PF17249.2 gi|21227083|ref|NP_633005.1| - 0.086 12.6 0.3 0.12 12.1 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5318) DASH_Spc19 PF08287.11 gi|21227084|ref|NP_633006.1| - 0.0056 16.6 0.0 0.0062 16.4 0.0 1.1 1 0 0 1 1 1 1 Spc19 SlyX PF04102.12 gi|21227084|ref|NP_633006.1| - 0.019 15.6 0.1 0.026 15.1 0.1 1.2 1 0 0 1 1 1 0 SlyX DUF1847 PF08901.11 gi|21227085|ref|NP_633007.1| - 7.9e-40 136.1 0.0 1e-39 135.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1847) HCV_NS1 PF01560.17 gi|21227085|ref|NP_633007.1| - 0.088 11.5 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein E2/NS1 zf-LSD1 PF06943.12 gi|21227085|ref|NP_633007.1| - 4.7 7.1 10.0 0.73 9.7 0.4 2.5 2 0 0 2 2 2 0 LSD1 zinc finger DUF169 PF02596.15 gi|21227086|ref|NP_633008.1| - 5.7e-59 199.5 0.0 6.4e-59 199.3 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 CbiA PF01656.23 gi|21227087|ref|NP_633009.1| - 1.2e-13 51.3 0.0 1.6e-13 50.9 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4 PF00037.27 gi|21227087|ref|NP_633009.1| - 1.2e-11 43.9 13.2 6.4e-07 28.9 2.1 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain ParA PF10609.9 gi|21227087|ref|NP_633009.1| - 3.6e-09 36.4 0.5 0.0023 17.4 0.1 2.5 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_6 PF12837.7 gi|21227087|ref|NP_633009.1| - 3.8e-08 33.1 11.8 0.00044 20.2 1.1 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21227087|ref|NP_633009.1| - 2.1e-07 31.4 8.1 0.0039 17.8 1.7 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227087|ref|NP_633009.1| - 1.4e-06 28.0 12.8 0.0034 17.4 1.6 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain AAA_31 PF13614.6 gi|21227087|ref|NP_633009.1| - 1.8e-06 28.0 0.1 0.059 13.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain Fer4_10 PF13237.6 gi|21227087|ref|NP_633009.1| - 8.4e-06 25.8 10.4 0.00024 21.2 11.6 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227087|ref|NP_633009.1| - 2.9e-05 24.9 7.7 0.022 15.7 0.5 3.2 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_NifH PF00142.18 gi|21227087|ref|NP_633009.1| - 4.9e-05 22.9 0.1 0.0087 15.5 0.0 2.4 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Fer4_9 PF13187.6 gi|21227087|ref|NP_633009.1| - 0.00018 21.6 12.3 0.0011 19.0 12.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_16 PF13191.6 gi|21227087|ref|NP_633009.1| - 0.00042 20.7 0.0 0.0019 18.6 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain Fer4_21 PF14697.6 gi|21227087|ref|NP_633009.1| - 0.0011 19.0 11.0 0.0011 19.0 11.0 3.3 2 2 2 4 4 4 3 4Fe-4S dicluster domain Herpeto_peptide PF14409.6 gi|21227087|ref|NP_633009.1| - 0.0013 19.0 0.1 0.0035 17.5 0.1 1.7 1 0 0 1 1 1 1 Ribosomally synthesized peptide in Herpetosiphon FTHFS PF01268.19 gi|21227087|ref|NP_633009.1| - 0.0018 16.6 0.0 0.0026 16.0 0.0 1.2 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase Fer4_17 PF13534.6 gi|21227087|ref|NP_633009.1| - 0.0034 17.9 10.0 0.25 11.9 1.5 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain RsgA_GTPase PF03193.16 gi|21227087|ref|NP_633009.1| - 0.0077 16.2 0.1 3.2 7.6 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase ArsA_ATPase PF02374.15 gi|21227087|ref|NP_633009.1| - 0.018 14.2 0.4 0.035 13.3 0.4 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|21227087|ref|NP_633009.1| - 0.027 14.0 0.0 2.7 7.4 0.0 2.3 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ Fer4_3 PF12798.7 gi|21227087|ref|NP_633009.1| - 0.046 14.7 18.5 0.43 11.6 3.5 3.1 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_25 PF13481.6 gi|21227087|ref|NP_633009.1| - 0.053 13.1 0.7 0.66 9.5 0.6 2.1 2 0 0 2 2 2 0 AAA domain Fer4_15 PF13459.6 gi|21227087|ref|NP_633009.1| - 0.055 14.2 13.2 0.38 11.5 2.5 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain ABC_tran PF00005.27 gi|21227087|ref|NP_633009.1| - 0.058 13.9 0.0 0.14 12.7 0.0 1.6 1 0 0 1 1 1 0 ABC transporter NACHT PF05729.12 gi|21227087|ref|NP_633009.1| - 0.083 12.8 0.1 0.2 11.6 0.0 1.7 2 0 0 2 2 1 0 NACHT domain NB-ARC PF00931.22 gi|21227087|ref|NP_633009.1| - 0.17 11.0 0.1 0.46 9.6 0.1 1.6 2 0 0 2 2 2 0 NB-ARC domain Fer4_8 PF13183.6 gi|21227087|ref|NP_633009.1| - 0.18 12.3 14.2 1.1e+03 0.1 14.2 2.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain PhoH PF02562.16 gi|21227087|ref|NP_633009.1| - 0.22 11.0 0.3 8.8 5.7 0.2 2.2 2 0 0 2 2 2 0 PhoH-like protein Fer4_4 PF12800.7 gi|21227087|ref|NP_633009.1| - 0.3 11.7 14.2 0.17 12.5 1.7 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|21227087|ref|NP_633009.1| - 1.1 9.8 11.9 1.2 9.7 1.3 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I CbiA PF01656.23 gi|21227088|ref|NP_633010.1| - 2.3e-18 66.5 0.0 3e-18 66.1 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|21227088|ref|NP_633010.1| - 2.8e-15 56.4 0.0 3.9e-09 36.3 0.0 3.0 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4 PF00037.27 gi|21227088|ref|NP_633010.1| - 9.9e-11 41.0 14.2 9.9e-06 25.2 2.1 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21227088|ref|NP_633010.1| - 4.4e-09 36.0 12.7 4e-05 23.5 0.8 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain AAA_31 PF13614.6 gi|21227088|ref|NP_633010.1| - 1.5e-06 28.2 0.0 7.1e-05 22.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain Fer4_21 PF14697.6 gi|21227088|ref|NP_633010.1| - 5.4e-06 26.4 5.0 1.3e-05 25.2 5.0 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227088|ref|NP_633010.1| - 1.1e-05 26.2 6.8 0.00025 21.9 0.4 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|21227088|ref|NP_633010.1| - 0.00011 22.3 8.7 0.0025 18.0 9.3 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227088|ref|NP_633010.1| - 0.00012 22.6 11.4 0.012 16.1 0.3 2.7 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21227088|ref|NP_633010.1| - 0.00012 22.2 19.9 0.0021 18.1 11.3 2.6 2 1 1 3 3 2 2 4Fe-4S dicluster domain AAA_25 PF13481.6 gi|21227088|ref|NP_633010.1| - 0.0018 17.9 0.0 0.0034 17.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_26 PF13500.6 gi|21227088|ref|NP_633010.1| - 0.0019 18.0 0.1 0.046 13.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain Fer4_NifH PF00142.18 gi|21227088|ref|NP_633010.1| - 0.0046 16.4 0.0 0.26 10.7 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|21227088|ref|NP_633010.1| - 0.0046 16.2 0.3 0.0083 15.3 0.3 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase Fer4_8 PF13183.6 gi|21227088|ref|NP_633010.1| - 0.0049 17.3 7.5 0.38 11.2 0.9 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227088|ref|NP_633010.1| - 0.02 15.0 2.0 0.02 15.0 2.0 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain MipZ PF09140.11 gi|21227088|ref|NP_633010.1| - 0.035 13.4 0.0 0.047 13.0 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ Fer4_17 PF13534.6 gi|21227088|ref|NP_633010.1| - 0.058 14.0 12.6 0.16 12.6 2.1 2.5 1 1 0 2 2 2 0 4Fe-4S dicluster domain PhoH PF02562.16 gi|21227088|ref|NP_633010.1| - 0.078 12.4 0.2 0.12 11.8 0.2 1.2 1 0 0 1 1 1 0 PhoH-like protein SKI PF01202.22 gi|21227088|ref|NP_633010.1| - 0.11 12.6 0.0 3.6 7.7 0.0 2.1 2 0 0 2 2 2 0 Shikimate kinase DUF2075 PF09848.9 gi|21227088|ref|NP_633010.1| - 0.18 11.0 0.0 0.24 10.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Fer4_3 PF12798.7 gi|21227088|ref|NP_633010.1| - 2.8 9.1 20.9 4.2 8.5 1.9 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Nitro_FeMo-Co PF02579.17 gi|21227089|ref|NP_633011.1| - 7.5e-20 71.1 0.0 1.1e-19 70.6 0.0 1.2 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor Nitro_FeMo-Co PF02579.17 gi|21227090|ref|NP_633012.1| - 2.3e-21 75.9 0.0 2.7e-21 75.7 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF134 PF02001.16 gi|21227091|ref|NP_633013.1| - 9.9e-27 93.4 0.1 1.2e-26 93.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF134 HTH_23 PF13384.6 gi|21227091|ref|NP_633013.1| - 0.00076 19.2 0.2 0.0013 18.4 0.1 1.4 1 1 0 1 1 1 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|21227091|ref|NP_633013.1| - 0.0028 17.3 0.1 0.0043 16.7 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|21227091|ref|NP_633013.1| - 0.0063 16.4 1.1 0.0082 16.1 0.3 1.5 2 0 0 2 2 2 1 ECF sigma factor HTH_31 PF13560.6 gi|21227091|ref|NP_633013.1| - 0.03 14.7 0.6 0.042 14.2 0.6 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain KORA PF16509.5 gi|21227091|ref|NP_633013.1| - 0.052 13.8 0.1 0.074 13.3 0.1 1.3 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor Sigma70_r4 PF04545.16 gi|21227091|ref|NP_633013.1| - 0.083 12.4 0.3 0.15 11.6 0.3 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 ParA PF10609.9 gi|21227092|ref|NP_633014.1| - 3.2e-94 315.0 0.0 3.9e-94 314.7 0.0 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|21227092|ref|NP_633014.1| - 3.5e-15 56.2 0.0 1.2e-14 54.4 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|21227092|ref|NP_633014.1| - 4.5e-09 36.5 0.3 1.4e-07 31.6 0.3 2.2 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 gi|21227092|ref|NP_633014.1| - 3.8e-07 29.6 0.0 7.7e-07 28.6 0.0 1.5 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.11 gi|21227092|ref|NP_633014.1| - 9.7e-07 28.3 0.0 1.7e-06 27.6 0.0 1.5 1 1 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.18 gi|21227092|ref|NP_633014.1| - 1.6e-06 27.8 0.0 2.9e-05 23.7 0.1 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.6 gi|21227092|ref|NP_633014.1| - 7.7e-05 22.4 0.0 0.00014 21.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain CBP_BcsQ PF06564.12 gi|21227092|ref|NP_633014.1| - 0.0009 18.8 0.0 0.48 9.9 0.2 2.2 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ MeaB PF03308.16 gi|21227092|ref|NP_633014.1| - 0.00096 18.2 0.2 0.0017 17.4 0.2 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 gi|21227092|ref|NP_633014.1| - 0.0072 16.1 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop RsgA_GTPase PF03193.16 gi|21227092|ref|NP_633014.1| - 0.011 15.6 0.3 0.02 14.8 0.1 1.5 2 0 0 2 2 1 0 RsgA GTPase SRP54 PF00448.22 gi|21227092|ref|NP_633014.1| - 0.021 14.5 0.1 0.038 13.6 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain APS_kinase PF01583.20 gi|21227092|ref|NP_633014.1| - 0.03 14.2 0.1 0.053 13.4 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase VirC1 PF07015.11 gi|21227092|ref|NP_633014.1| - 0.03 13.6 0.1 0.053 12.8 0.1 1.2 1 0 0 1 1 1 0 VirC1 protein NB-ARC PF00931.22 gi|21227092|ref|NP_633014.1| - 0.034 13.3 0.6 0.055 12.6 0.2 1.5 2 0 0 2 2 2 0 NB-ARC domain AAA_26 PF13500.6 gi|21227092|ref|NP_633014.1| - 0.043 13.6 0.8 2.8 7.7 0.2 2.3 2 1 0 2 2 2 0 AAA domain Cytochrom_B559 PF00283.19 gi|21227092|ref|NP_633014.1| - 0.048 13.1 0.3 0.086 12.3 0.3 1.4 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Zeta_toxin PF06414.12 gi|21227092|ref|NP_633014.1| - 0.23 10.7 0.0 0.34 10.2 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin zf-ribbon_3 PF13248.6 gi|21227092|ref|NP_633014.1| - 0.32 10.5 1.9 0.55 9.7 0.5 2.0 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|21227092|ref|NP_633014.1| - 0.33 11.0 0.5 4.8 7.2 0.2 2.4 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Thioredoxin PF00085.20 gi|21227093|ref|NP_633015.1| - 5.9e-14 51.9 0.0 8e-14 51.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 gi|21227093|ref|NP_633015.1| - 0.00048 20.3 0.0 0.0011 19.1 0.0 1.6 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.6 gi|21227093|ref|NP_633015.1| - 0.0014 18.9 0.0 0.0025 18.1 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like TraF PF13728.6 gi|21227093|ref|NP_633015.1| - 0.0061 16.4 0.0 0.0094 15.8 0.0 1.3 1 0 0 1 1 1 1 F plasmid transfer operon protein AhpC-TSA PF00578.21 gi|21227093|ref|NP_633015.1| - 0.0072 16.2 0.0 0.0097 15.8 0.0 1.4 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_2 PF13098.6 gi|21227093|ref|NP_633015.1| - 0.0082 16.6 0.0 0.013 15.9 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Redoxin PF08534.10 gi|21227093|ref|NP_633015.1| - 0.029 14.1 0.0 0.037 13.7 0.0 1.3 1 0 0 1 1 1 0 Redoxin DIM1 PF02966.16 gi|21227093|ref|NP_633015.1| - 0.034 13.9 0.0 0.046 13.5 0.0 1.2 1 0 0 1 1 1 0 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 gi|21227093|ref|NP_633015.1| - 0.035 13.9 0.0 0.051 13.3 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin DUF4972 PF16342.5 gi|21227093|ref|NP_633015.1| - 0.041 13.6 0.0 0.057 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) DUF836 PF05768.14 gi|21227093|ref|NP_633015.1| - 0.057 13.8 0.0 0.092 13.2 0.0 1.5 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DsbD PF02683.15 gi|21227094|ref|NP_633016.1| - 1.6e-33 116.4 25.1 3.8e-33 115.2 25.1 1.5 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|21227094|ref|NP_633016.1| - 4.7e-13 49.5 19.5 7.9e-13 48.8 19.5 1.4 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region MerE PF05052.12 gi|21227094|ref|NP_633016.1| - 0.0038 17.1 8.8 0.31 11.0 1.4 2.9 2 1 1 3 3 3 2 MerE protein DUF3169 PF11368.8 gi|21227094|ref|NP_633016.1| - 0.064 12.8 5.5 0.49 9.9 1.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) Colicin PF01024.19 gi|21227094|ref|NP_633016.1| - 0.54 10.1 4.4 1 9.2 4.4 1.4 1 0 0 1 1 1 0 Colicin pore forming domain CbiC PF02570.15 gi|21227096|ref|NP_633018.1| - 2e-61 207.1 0.6 2.4e-61 206.8 0.6 1.1 1 0 0 1 1 1 1 Precorrin-8X methylmutase PglD_N PF17836.1 gi|21227096|ref|NP_633018.1| - 0.088 13.5 0.0 0.2 12.3 0.0 1.5 1 0 0 1 1 1 0 PglD N-terminal domain TP_methylase PF00590.20 gi|21227097|ref|NP_633019.1| - 4.5e-36 124.8 0.6 5.4e-36 124.5 0.6 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiG_C PF01890.16 gi|21227098|ref|NP_633020.1| - 4.9e-29 101.3 0.0 5.5e-29 101.1 0.0 1.0 1 0 0 1 1 1 1 Cobalamin synthesis G C-terminus CbiG_N PF11760.8 gi|21227099|ref|NP_633021.1| - 3.4e-24 84.7 2.6 7.7e-24 83.5 0.1 2.2 2 0 0 2 2 2 1 Cobalamin synthesis G N-terminal TP_methylase PF00590.20 gi|21227100|ref|NP_633022.1| - 3e-45 154.8 0.4 3.5e-45 154.6 0.4 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|21227100|ref|NP_633022.1| - 0.0097 16.3 0.1 0.02 15.3 0.1 1.6 1 1 0 1 1 1 1 Radical SAM superfamily TP_methylase PF00590.20 gi|21227101|ref|NP_633023.1| - 3.9e-34 118.4 0.0 1.4e-33 116.6 0.0 1.7 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Methyltransf_18 PF12847.7 gi|21227102|ref|NP_633024.1| - 2.6e-10 40.4 0.3 4.4e-10 39.7 0.2 1.3 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227102|ref|NP_633024.1| - 3.7e-10 39.8 0.2 4.4e-10 39.5 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21227102|ref|NP_633024.1| - 9.6e-08 32.6 0.1 4.6e-07 30.4 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|21227102|ref|NP_633024.1| - 1.2e-07 31.5 0.1 1.4e-07 31.2 0.1 1.2 1 1 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.18 gi|21227102|ref|NP_633024.1| - 3.9e-06 26.7 0.0 6.4e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.13 gi|21227102|ref|NP_633024.1| - 1.8e-05 24.3 0.7 2.1e-05 24.1 0.7 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 gi|21227102|ref|NP_633024.1| - 2.7e-05 24.0 0.2 0.00012 22.0 0.0 1.8 1 1 1 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|21227102|ref|NP_633024.1| - 4e-05 23.1 0.3 6.6e-05 22.4 0.2 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|21227102|ref|NP_633024.1| - 5.8e-05 23.8 0.1 8.1e-05 23.3 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21227102|ref|NP_633024.1| - 0.0001 21.7 0.0 0.00011 21.6 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|21227102|ref|NP_633024.1| - 0.00016 21.2 0.0 0.00022 20.7 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_11 PF08241.12 gi|21227102|ref|NP_633024.1| - 0.00037 21.1 0.1 0.00087 19.9 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|21227102|ref|NP_633024.1| - 0.00057 19.6 0.2 0.0008 19.1 0.2 1.3 1 1 0 1 1 1 1 Conserved hypothetical protein 95 GCD14 PF08704.10 gi|21227102|ref|NP_633024.1| - 0.001 18.8 0.0 0.0013 18.5 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit GidB PF02527.15 gi|21227102|ref|NP_633024.1| - 0.0028 17.0 0.2 0.0044 16.3 0.2 1.3 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G DOT1 PF08123.13 gi|21227102|ref|NP_633024.1| - 0.0033 17.0 0.0 0.0057 16.2 0.0 1.4 1 0 0 1 1 1 1 Histone methylation protein DOT1 Methyltr_RsmB-F PF01189.17 gi|21227102|ref|NP_633024.1| - 0.0073 16.0 0.1 0.021 14.5 0.0 1.6 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F Met_10 PF02475.16 gi|21227102|ref|NP_633024.1| - 0.028 14.1 0.3 0.15 11.8 0.3 1.9 1 1 1 2 2 2 0 Met-10+ like-protein FtsJ PF01728.19 gi|21227102|ref|NP_633024.1| - 0.03 14.5 0.0 0.041 14.0 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_15 PF09445.10 gi|21227102|ref|NP_633024.1| - 0.037 13.6 0.1 0.071 12.7 0.0 1.4 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_23 PF13489.6 gi|21227102|ref|NP_633024.1| - 0.08 12.8 0.0 0.087 12.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.6 gi|21227102|ref|NP_633024.1| - 0.09 12.8 0.0 0.15 12.1 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain HMGL-like PF00682.19 gi|21227104|ref|NP_633026.1| - 1.2e-34 120.0 0.0 1.6e-34 119.6 0.0 1.1 1 0 0 1 1 1 1 HMGL-like Iso_dh PF00180.20 gi|21227105|ref|NP_633027.1| - 3.2e-84 283.1 0.0 3.9e-84 282.8 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Acetyltransf_CG PF14542.6 gi|21227105|ref|NP_633027.1| - 0.026 14.6 0.0 0.61 10.3 0.0 2.4 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase TatD_DNase PF01026.21 gi|21227106|ref|NP_633028.1| - 2.7e-24 85.9 0.0 3.5e-24 85.6 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase Amidohydro_1 PF01979.20 gi|21227106|ref|NP_633028.1| - 0.05 12.9 0.1 4.2 6.6 0.1 2.3 1 1 1 2 2 2 0 Amidohydrolase family HTH_3 PF01381.22 gi|21227107|ref|NP_633029.1| - 8.5e-10 38.5 1.1 1.3e-09 38.0 1.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|21227107|ref|NP_633029.1| - 1.7e-08 34.4 0.6 1.7e-08 34.4 0.6 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|21227107|ref|NP_633029.1| - 1.1e-07 32.1 0.0 1.6e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|21227107|ref|NP_633029.1| - 3.9e-05 23.4 0.9 6.3e-05 22.7 0.9 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|21227107|ref|NP_633029.1| - 0.093 12.7 0.2 0.16 12.0 0.2 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain AAA PF00004.29 gi|21227108|ref|NP_633030.1| - 4.6e-44 150.0 0.1 2.3e-43 147.8 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|21227108|ref|NP_633030.1| - 2.9e-16 59.0 0.8 7.5e-16 57.7 0.8 1.7 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 gi|21227108|ref|NP_633030.1| - 1.3e-10 41.1 0.0 2.7e-10 40.1 0.0 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 gi|21227108|ref|NP_633030.1| - 3e-08 33.8 0.6 1.1e-07 31.9 0.2 2.2 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|21227108|ref|NP_633030.1| - 6.5e-07 29.9 0.5 0.00027 21.4 0.1 3.0 2 1 1 3 3 3 1 AAA ATPase domain DUF815 PF05673.13 gi|21227108|ref|NP_633030.1| - 1.7e-06 27.4 0.0 3.5e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_2 PF07724.14 gi|21227108|ref|NP_633030.1| - 1.1e-05 25.6 0.5 2.8e-05 24.3 0.0 1.9 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) Prot_ATP_OB_N PF17758.1 gi|21227108|ref|NP_633030.1| - 7e-05 22.4 0.0 0.00018 21.0 0.0 1.8 1 0 0 1 1 1 1 Proteasomal ATPase OB N-terminal domain Filament PF00038.21 gi|21227108|ref|NP_633030.1| - 0.00014 21.6 1.3 0.00014 21.6 1.3 1.8 2 0 0 2 2 2 1 Intermediate filament protein RuvB_N PF05496.12 gi|21227108|ref|NP_633030.1| - 0.00033 20.4 0.0 0.00094 19.0 0.0 1.7 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|21227108|ref|NP_633030.1| - 0.00037 21.0 0.6 0.0037 17.8 0.0 2.6 3 0 0 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|21227108|ref|NP_633030.1| - 0.00076 19.8 3.5 0.051 13.9 0.1 3.0 2 1 1 3 3 3 1 AAA domain ATPase PF06745.13 gi|21227108|ref|NP_633030.1| - 0.0012 18.2 2.8 0.14 11.4 0.0 3.2 2 1 1 3 3 3 1 KaiC APG6_N PF17675.1 gi|21227108|ref|NP_633030.1| - 0.0019 18.8 2.5 0.0019 18.8 2.5 2.1 3 0 0 3 3 1 1 Apg6 coiled-coil region AAA_28 PF13521.6 gi|21227108|ref|NP_633030.1| - 0.0026 18.0 0.0 0.0057 16.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|21227108|ref|NP_633030.1| - 0.0032 17.6 0.0 0.0081 16.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain Rab5-bind PF09311.11 gi|21227108|ref|NP_633030.1| - 0.0051 16.2 1.5 0.011 15.2 1.5 1.5 1 0 0 1 1 1 1 Rabaptin-like protein AAA_3 PF07726.11 gi|21227108|ref|NP_633030.1| - 0.0064 16.3 0.0 0.014 15.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|21227108|ref|NP_633030.1| - 0.011 15.8 0.0 0.036 14.1 0.0 1.9 1 0 0 1 1 1 0 AAA domain CEP63 PF17045.5 gi|21227108|ref|NP_633030.1| - 0.014 15.3 2.2 0.036 14.0 2.2 1.6 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa Phage_GP20 PF06810.11 gi|21227108|ref|NP_633030.1| - 0.018 14.9 2.0 0.54 10.1 0.0 2.6 2 0 0 2 2 2 0 Phage minor structural protein GP20 AAA_13 PF13166.6 gi|21227108|ref|NP_633030.1| - 0.018 13.7 2.6 0.12 10.9 0.6 2.4 3 0 0 3 3 3 0 AAA domain Sigma54_activat PF00158.26 gi|21227108|ref|NP_633030.1| - 0.023 14.4 0.1 0.47 10.1 0.0 2.5 2 1 0 2 2 2 0 Sigma-54 interaction domain ATPase_2 PF01637.18 gi|21227108|ref|NP_633030.1| - 0.024 14.5 1.6 7.7 6.3 0.0 3.1 2 1 1 3 3 3 0 ATPase domain predominantly from Archaea TIP49 PF06068.13 gi|21227108|ref|NP_633030.1| - 0.025 13.8 0.0 0.047 12.9 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain IstB_IS21 PF01695.17 gi|21227108|ref|NP_633030.1| - 0.026 14.3 0.1 0.12 12.1 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_17 PF13207.6 gi|21227108|ref|NP_633030.1| - 0.026 14.9 0.7 0.16 12.4 0.1 2.6 2 2 0 2 2 2 0 AAA domain Spc7 PF08317.11 gi|21227108|ref|NP_633030.1| - 0.031 13.2 3.7 0.036 12.9 1.2 2.2 3 0 0 3 3 3 0 Spc7 kinetochore protein ADIP PF11559.8 gi|21227108|ref|NP_633030.1| - 0.043 13.9 2.5 0.11 12.5 2.5 1.7 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding bZIP_2 PF07716.15 gi|21227108|ref|NP_633030.1| - 0.046 13.8 0.5 0.046 13.8 0.5 3.1 2 1 1 3 3 2 0 Basic region leucine zipper Mg_chelatase PF01078.21 gi|21227108|ref|NP_633030.1| - 0.069 12.5 0.0 0.19 11.1 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ABC_tran PF00005.27 gi|21227108|ref|NP_633030.1| - 0.096 13.2 0.1 4.3 7.9 0.0 2.9 3 0 0 3 3 3 0 ABC transporter DUF3450 PF11932.8 gi|21227108|ref|NP_633030.1| - 0.12 11.6 3.3 0.37 10.1 3.3 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF5082 PF16888.5 gi|21227108|ref|NP_633030.1| - 0.6 10.4 5.6 5.5 7.3 2.9 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) Tektin PF03148.14 gi|21227108|ref|NP_633030.1| - 0.68 8.6 9.8 0.037 12.8 1.8 2.5 3 0 0 3 3 3 0 Tektin family TMF_TATA_bd PF12325.8 gi|21227108|ref|NP_633030.1| - 1.2 9.4 10.5 0.55 10.5 3.8 3.0 3 0 0 3 3 2 0 TATA element modulatory factor 1 TATA binding ZapB PF06005.12 gi|21227108|ref|NP_633030.1| - 2.4 8.7 11.7 3.4 8.2 6.8 3.1 3 0 0 3 3 3 0 Cell division protein ZapB TSC22 PF01166.18 gi|21227108|ref|NP_633030.1| - 7.7 6.9 7.0 8.9 6.7 0.4 3.1 3 1 0 3 3 2 0 TSC-22/dip/bun family DUF99 PF01949.16 gi|21227109|ref|NP_633031.1| - 1.6e-66 223.3 0.1 1.7e-66 223.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 CutC PF03932.14 gi|21227109|ref|NP_633031.1| - 0.037 13.5 0.2 0.82 9.1 0.0 2.1 2 0 0 2 2 2 0 CutC family Tubulin PF00091.25 gi|21227110|ref|NP_633032.1| - 1.5e-41 142.8 0.9 2.7e-41 142.0 0.9 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|21227110|ref|NP_633032.1| - 7.2e-35 119.2 0.9 2.3e-34 117.6 0.9 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain DUF3602 PF12223.8 gi|21227110|ref|NP_633032.1| - 0.03 14.9 0.3 0.075 13.6 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3602) NAD_binding_10 PF13460.6 gi|21227110|ref|NP_633032.1| - 0.051 13.5 0.1 0.15 12.0 0.1 1.8 1 0 0 1 1 1 0 NAD(P)H-binding CENP-X PF09415.10 gi|21227110|ref|NP_633032.1| - 0.12 12.7 0.1 0.47 10.8 0.1 2.0 1 0 0 1 1 1 0 CENP-S associating Centromere protein X SecE PF00584.20 gi|21227111|ref|NP_633033.1| - 1.1e-05 25.2 0.2 1.3e-05 25.0 0.2 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Spt5-NGN PF03439.13 gi|21227112|ref|NP_633034.1| - 8.9e-25 86.4 0.1 1.3e-24 85.9 0.1 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|21227112|ref|NP_633034.1| - 1.2e-06 28.3 1.1 8.3e-06 25.6 0.3 2.3 2 0 0 2 2 2 1 KOW motif Ribosomal_L11_N PF03946.14 gi|21227113|ref|NP_633035.1| - 1.2e-24 85.9 1.0 1.2e-24 85.9 1.0 1.8 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|21227113|ref|NP_633035.1| - 3.6e-22 78.6 0.5 3.6e-22 78.6 0.5 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain Ribosomal_L1 PF00687.21 gi|21227114|ref|NP_633036.1| - 1.5e-44 152.2 0.1 1.8e-44 152.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L10 PF00466.20 gi|21227115|ref|NP_633037.1| - 9.8e-24 83.4 0.3 2.4e-23 82.2 0.3 1.6 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|21227115|ref|NP_633037.1| - 6.1e-20 71.0 0.2 1.5e-19 69.8 0.1 1.6 2 0 0 2 2 2 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|21227115|ref|NP_633037.1| - 0.00025 21.6 28.0 0.00025 21.6 28.0 3.0 3 1 0 3 3 3 1 60s Acidic ribosomal protein Rab5-bind PF09311.11 gi|21227115|ref|NP_633037.1| - 0.024 14.0 1.3 0.041 13.3 1.3 1.3 1 0 0 1 1 1 0 Rabaptin-like protein WRNPLPNID PF15017.6 gi|21227115|ref|NP_633037.1| - 0.096 13.6 2.2 0.21 12.5 2.2 1.6 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box DUF3824 PF12868.7 gi|21227115|ref|NP_633037.1| - 2.2 8.9 5.7 4.8 7.8 5.7 1.5 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) FSAP_sig_propep PF03032.15 gi|21227115|ref|NP_633037.1| - 4.5 7.4 7.5 10 6.3 7.5 1.5 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide Ribosomal_60s PF00428.19 gi|21227116|ref|NP_633038.1| - 2e-20 73.2 23.6 2.3e-20 73.0 23.6 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein TetR_C_31 PF17940.1 gi|21227116|ref|NP_633038.1| - 0.0032 17.6 5.3 0.0046 17.1 5.3 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain CAP_N PF01213.19 gi|21227116|ref|NP_633038.1| - 0.021 14.3 1.3 0.023 14.2 1.3 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal LD_cluster3 PF18180.1 gi|21227116|ref|NP_633038.1| - 0.2 11.3 0.8 0.23 11.0 0.8 1.1 1 0 0 1 1 1 0 SLOG cluster3 family Radical_SAM PF04055.21 gi|21227117|ref|NP_633039.1| - 2.6e-14 53.9 0.1 5.3e-14 52.9 0.1 1.5 1 1 0 1 1 1 1 Radical SAM superfamily DUF3463 PF11946.8 gi|21227117|ref|NP_633039.1| - 6.1e-08 32.5 0.2 1.3e-07 31.5 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3463) SPASM PF13186.6 gi|21227117|ref|NP_633039.1| - 0.0014 19.1 0.6 0.0014 19.1 0.6 2.3 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain HicB_lk_antitox PF15919.5 gi|21227117|ref|NP_633039.1| - 0.0025 17.9 0.0 0.0067 16.5 0.0 1.7 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system Fer4_12 PF13353.6 gi|21227117|ref|NP_633039.1| - 0.0087 16.3 0.0 0.025 14.9 0.0 1.8 1 1 0 1 1 1 1 4Fe-4S single cluster domain ChuX_HutX PF06228.13 gi|21227117|ref|NP_633039.1| - 0.15 11.8 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 Haem utilisation ChuX/HutX Acetyltransf_7 PF13508.7 gi|21227118|ref|NP_633040.1| - 1.6e-12 47.7 0.0 2.2e-12 47.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21227118|ref|NP_633040.1| - 6.2e-08 32.6 0.0 7.1e-08 32.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21227118|ref|NP_633040.1| - 2.2e-06 27.9 0.0 2.8e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family MOZ_SAS PF01853.18 gi|21227118|ref|NP_633040.1| - 0.003 17.3 0.0 0.0033 17.1 0.0 1.2 1 0 0 1 1 1 1 MOZ/SAS family Acetyltransf_CG PF14542.6 gi|21227118|ref|NP_633040.1| - 0.0074 16.4 0.0 0.012 15.8 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 gi|21227118|ref|NP_633040.1| - 0.01 15.8 0.0 0.043 13.8 0.0 1.9 1 1 0 1 1 1 0 FR47-like protein GNAT_acetyltr_2 PF13718.6 gi|21227118|ref|NP_633040.1| - 0.032 13.6 0.0 0.044 13.2 0.0 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase 2 Acetyltransf_9 PF13527.7 gi|21227118|ref|NP_633040.1| - 0.13 12.4 0.0 0.64 10.1 0.0 2.0 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain SAM_adeno_trans PF01887.16 gi|21227119|ref|NP_633041.1| - 1.2e-80 270.4 0.1 1.3e-80 270.2 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase DUF1616 PF07760.11 gi|21227120|ref|NP_633042.1| - 2.3e-25 89.6 0.0 2.9e-25 89.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) DUF4969 PF16339.5 gi|21227120|ref|NP_633042.1| - 0.011 16.0 0.1 0.023 15.0 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4969) Fer4 PF00037.27 gi|21227121|ref|NP_633043.1| - 0.04 13.7 1.9 0.04 13.7 1.9 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21227121|ref|NP_633043.1| - 0.047 14.6 4.7 0.15 13.1 4.7 1.8 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|21227121|ref|NP_633043.1| - 0.26 11.5 4.8 0.53 10.5 4.8 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227121|ref|NP_633043.1| - 0.58 10.8 5.1 1.5 9.5 5.1 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Mss4 PF04421.13 gi|21227121|ref|NP_633043.1| - 1 9.5 3.8 9.5 6.4 0.1 2.4 1 1 1 2 2 2 0 Mss4 protein DNA_binding_1 PF01035.20 gi|21227122|ref|NP_633044.1| - 4.8e-33 113.1 0.0 6.9e-33 112.6 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 gi|21227122|ref|NP_633044.1| - 9.2e-08 32.8 0.0 1.6e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LolA_like PF17131.4 gi|21227124|ref|NP_633046.1| - 9.2e-17 61.4 0.1 2.6e-16 59.9 0.0 1.7 1 1 1 2 2 2 1 Outer membrane lipoprotein-sorting protein DUF2092 PF09865.9 gi|21227124|ref|NP_633046.1| - 1.4e-07 31.1 0.0 2.7e-05 23.6 0.0 2.1 1 1 0 1 1 1 1 Predicted periplasmic protein (DUF2092) MucB_RseB PF03888.14 gi|21227124|ref|NP_633046.1| - 1e-06 28.4 0.0 2.4e-06 27.2 0.0 1.5 1 1 0 1 1 1 1 MucB/RseB N-terminal domain DUF1571 PF07608.11 gi|21227124|ref|NP_633046.1| - 6.5e-05 22.5 0.0 0.00019 20.9 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1571) LolA PF03548.15 gi|21227124|ref|NP_633046.1| - 0.00099 18.8 0.0 0.0048 16.6 0.0 2.0 1 1 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA Sec62 PF03839.16 gi|21227124|ref|NP_633046.1| - 0.019 14.5 0.7 0.027 14.0 0.7 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 DUF1329 PF07044.11 gi|21227124|ref|NP_633046.1| - 0.091 12.0 0.1 0.27 10.5 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1329) RTP PF02334.16 gi|21227124|ref|NP_633046.1| - 0.11 13.1 0.2 0.32 11.6 0.0 1.7 2 0 0 2 2 2 0 Replication terminator protein LolA_like PF17131.4 gi|21227126|ref|NP_633048.1| - 1.3e-10 41.3 0.7 5.4e-10 39.3 0.7 2.0 1 1 0 1 1 1 1 Outer membrane lipoprotein-sorting protein DUF4367 PF14285.6 gi|21227126|ref|NP_633048.1| - 2.6e-09 37.5 2.6 2.6e-09 37.5 2.6 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4367) DUF1571 PF07608.11 gi|21227126|ref|NP_633048.1| - 1.4e-06 27.9 0.2 4.9e-06 26.1 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1571) DUF2092 PF09865.9 gi|21227126|ref|NP_633048.1| - 0.0014 18.1 0.1 0.035 13.4 0.0 2.6 2 1 0 2 2 2 1 Predicted periplasmic protein (DUF2092) MucB_RseB PF03888.14 gi|21227126|ref|NP_633048.1| - 0.0023 17.5 0.0 0.0042 16.6 0.0 1.4 1 0 0 1 1 1 1 MucB/RseB N-terminal domain DUF1329 PF07044.11 gi|21227126|ref|NP_633048.1| - 0.018 14.3 0.0 0.032 13.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1329) ThiC_Rad_SAM PF01964.18 gi|161485678|ref|NP_633049.2| - 3.1e-175 583.0 0.2 3.5e-175 582.8 0.2 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family Glycos_transf_2 PF00535.26 gi|21227128|ref|NP_633050.1| - 7.8e-15 55.1 0.0 1.1e-14 54.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227128|ref|NP_633050.1| - 5.9e-06 26.3 0.0 9.3e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|21227128|ref|NP_633050.1| - 0.0031 18.0 0.0 0.0053 17.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 DsbD PF02683.15 gi|21227128|ref|NP_633050.1| - 0.029 14.3 3.4 0.044 13.7 3.4 1.2 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region ArAE_2_N PF10337.9 gi|21227128|ref|NP_633050.1| - 1.2 8.1 4.2 1.7 7.6 4.2 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal TBP PF00352.21 gi|21227129|ref|NP_633051.1| - 1.7e-53 178.5 0.2 6.1e-26 90.2 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|21227129|ref|NP_633051.1| - 4.8e-08 33.0 0.0 0.0045 17.1 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NdhS PF11623.8 gi|21227129|ref|NP_633051.1| - 0.0056 16.3 0.0 1.1 8.9 0.0 2.4 2 0 0 2 2 2 2 NAD(P)H dehydrogenase subunit S RTT107_BRCT_5 PF16770.5 gi|21227129|ref|NP_633051.1| - 0.021 14.7 0.1 0.037 13.9 0.1 1.3 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain TBP PF00352.21 gi|21227130|ref|NP_633052.1| - 5.2e-55 183.4 0.2 1e-26 92.7 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|21227130|ref|NP_633052.1| - 4.2e-08 33.2 0.0 0.0045 17.1 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NdhS PF11623.8 gi|21227130|ref|NP_633052.1| - 0.0054 16.4 0.0 1.1 8.9 0.0 2.5 2 0 0 2 2 2 2 NAD(P)H dehydrogenase subunit S RTT107_BRCT_5 PF16770.5 gi|21227130|ref|NP_633052.1| - 0.025 14.5 0.1 0.049 13.5 0.1 1.4 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain DUF218 PF02698.17 gi|21227130|ref|NP_633052.1| - 0.081 12.9 0.0 13 5.8 0.0 2.2 1 1 1 2 2 2 0 DUF218 domain SMC_ScpB PF04079.16 gi|21227131|ref|NP_633053.1| - 5.8e-38 130.0 0.0 1.5e-37 128.7 0.0 1.7 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB HTH_20 PF12840.7 gi|21227131|ref|NP_633053.1| - 0.04 14.0 0.0 2.2 8.4 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain NitrOD5 PF11537.8 gi|21227131|ref|NP_633053.1| - 0.084 13.0 0.1 0.5 10.5 0.0 2.2 2 0 0 2 2 2 0 Nitrosopumilus output domain 5 EnY2 PF10163.9 gi|21227131|ref|NP_633053.1| - 0.11 12.9 2.3 0.6 10.5 0.0 3.2 4 1 1 5 5 5 0 Transcription factor e(y)2 SMC_ScpA PF02616.14 gi|21227132|ref|NP_633054.1| - 6.9e-16 58.9 0.2 1.1e-13 51.7 0.2 2.2 1 1 0 1 1 1 1 Segregation and condensation protein ScpA CbbQ_C PF08406.10 gi|21227132|ref|NP_633054.1| - 0.078 13.2 0.3 7.7 6.8 0.0 2.4 2 0 0 2 2 2 0 CbbQ/NirQ/NorQ C-terminal SMC_N PF02463.19 gi|21227133|ref|NP_633055.1| - 5.8e-71 238.4 0.0 1.2e-70 237.4 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|21227133|ref|NP_633055.1| - 2.1e-34 118.3 0.0 8.9e-34 116.3 0.0 2.2 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_23 PF13476.6 gi|21227133|ref|NP_633055.1| - 8.5e-10 39.5 31.3 8.5e-10 39.5 31.3 6.7 2 2 2 4 4 1 1 AAA domain AAA_15 PF13175.6 gi|21227133|ref|NP_633055.1| - 2.7e-09 37.2 15.9 2.7e-09 37.2 15.9 4.0 2 2 0 2 2 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|21227133|ref|NP_633055.1| - 2.8e-09 37.2 12.4 6.4e-05 22.9 0.1 4.1 3 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21227133|ref|NP_633055.1| - 9.4e-07 28.5 0.0 2.2e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain TolA_bind_tri PF16331.5 gi|21227133|ref|NP_633055.1| - 0.0022 18.0 0.9 0.0022 18.0 0.9 8.4 6 1 2 8 8 8 3 TolA binding protein trimerisation APG6_N PF17675.1 gi|21227133|ref|NP_633055.1| - 0.009 16.5 10.8 0.009 16.5 10.8 9.3 2 2 5 7 7 5 1 Apg6 coiled-coil region GIT_CC PF16559.5 gi|21227133|ref|NP_633055.1| - 2 8.4 12.7 0.25 11.2 3.4 4.0 3 1 0 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor ABC_tran PF00005.27 gi|21227133|ref|NP_633055.1| - 2.3 8.7 0.0 2.3 8.7 0.0 5.2 3 2 0 3 3 3 0 ABC transporter Urocanase PF01175.18 gi|21227133|ref|NP_633055.1| - 2.6 7.6 4.8 7.7 6.1 1.3 3.2 2 1 0 2 2 2 0 Urocanase Rossmann-like domain Tektin PF03148.14 gi|21227134|ref|NP_633056.1| - 0.00026 19.9 0.5 0.00037 19.4 0.5 1.2 1 0 0 1 1 1 1 Tektin family VASP_tetra PF08776.11 gi|21227134|ref|NP_633056.1| - 0.0017 17.9 0.2 0.11 12.0 0.0 3.4 3 0 0 3 3 3 1 VASP tetramerisation domain Helo_like_N PF17111.5 gi|21227134|ref|NP_633056.1| - 0.089 12.2 1.0 0.11 11.8 0.1 1.6 2 0 0 2 2 2 0 Fungal N-terminal domain of STAND proteins FeoB_N PF02421.18 gi|21227135|ref|NP_633057.1| - 1.9e-55 186.7 0.3 3.1e-55 186.0 0.3 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|21227135|ref|NP_633057.1| - 3.8e-25 88.3 25.3 1e-13 51.5 7.4 2.9 3 0 0 3 3 3 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|21227135|ref|NP_633057.1| - 1.6e-19 70.1 0.1 2.9e-19 69.2 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|21227135|ref|NP_633057.1| - 6.1e-16 57.9 0.5 6.1e-16 57.9 0.5 3.4 4 0 0 4 4 4 1 Ferrous iron transport protein B C terminus AIG1 PF04548.16 gi|21227135|ref|NP_633057.1| - 0.00014 21.3 0.0 0.00022 20.6 0.0 1.2 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 gi|21227135|ref|NP_633057.1| - 0.0048 17.0 1.5 0.046 13.8 0.1 2.2 1 1 1 2 2 2 1 Dynamin family ATP_bind_1 PF03029.17 gi|21227135|ref|NP_633057.1| - 0.021 14.6 0.4 0.056 13.2 0.1 1.8 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein SRPRB PF09439.10 gi|21227135|ref|NP_633057.1| - 0.13 11.6 0.0 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Fe_dep_repr_C PF02742.15 gi|21227136|ref|NP_633058.1| - 1.6e-28 98.6 0.3 5.7e-28 96.8 0.3 1.9 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|21227136|ref|NP_633058.1| - 1.1e-22 80.0 0.8 4.8e-22 77.9 0.5 2.2 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.14 gi|21227136|ref|NP_633058.1| - 2.2e-16 59.9 0.7 1.3e-14 54.2 0.3 2.4 2 1 0 2 2 2 1 FeoA domain HTH_24 PF13412.6 gi|21227136|ref|NP_633058.1| - 1.1e-07 31.2 0.0 7.6e-07 28.6 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|21227136|ref|NP_633058.1| - 2.3e-07 30.7 0.0 6.6e-07 29.2 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|21227136|ref|NP_633058.1| - 1.3e-06 28.2 0.0 4.1e-06 26.6 0.0 1.8 2 0 0 2 2 1 1 HTH domain TrmB PF01978.19 gi|21227136|ref|NP_633058.1| - 2.4e-06 27.3 0.1 4.7e-06 26.4 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_12 PF08461.10 gi|21227136|ref|NP_633058.1| - 4.4e-06 26.5 0.0 1.2e-05 25.1 0.0 1.8 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain MarR_2 PF12802.7 gi|21227136|ref|NP_633058.1| - 5e-06 26.3 0.0 1.1e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21227136|ref|NP_633058.1| - 1.1e-05 25.9 0.0 2.3e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|21227136|ref|NP_633058.1| - 3.1e-05 23.8 0.0 5.4e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HrcA_DNA-bdg PF03444.15 gi|21227136|ref|NP_633058.1| - 0.00015 21.4 0.1 0.00031 20.3 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Rrf2 PF02082.20 gi|21227136|ref|NP_633058.1| - 0.00016 21.9 0.1 0.00069 19.9 0.1 2.1 1 1 0 2 2 2 1 Transcriptional regulator LexA_DNA_bind PF01726.16 gi|21227136|ref|NP_633058.1| - 0.00017 21.3 0.0 0.00041 20.1 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain HTH_6 PF01418.17 gi|21227136|ref|NP_633058.1| - 0.00033 20.6 0.0 0.00073 19.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family DUF2250 PF10007.9 gi|21227136|ref|NP_633058.1| - 0.00052 20.1 0.8 0.00094 19.3 0.8 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_IclR PF09339.10 gi|21227136|ref|NP_633058.1| - 0.00057 19.6 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain GntR PF00392.21 gi|21227136|ref|NP_633058.1| - 0.0031 17.1 0.0 0.0086 15.7 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 gi|21227136|ref|NP_633058.1| - 0.0051 16.7 0.1 0.019 14.9 0.0 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_micro PF17007.5 gi|21227136|ref|NP_633058.1| - 0.015 14.1 0.1 0.02 13.8 0.1 1.1 1 0 0 1 1 1 0 HTH-like HTH_45 PF14947.6 gi|21227136|ref|NP_633058.1| - 0.016 15.2 0.2 0.026 14.5 0.2 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DUF4423 PF14394.6 gi|21227136|ref|NP_633058.1| - 0.025 14.3 0.1 0.04 13.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_AsnC-type PF13404.6 gi|21227136|ref|NP_633058.1| - 0.032 14.1 0.0 0.079 12.8 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain IF2_N PF04760.15 gi|21227136|ref|NP_633058.1| - 0.039 13.8 0.1 0.14 12.0 0.1 2.0 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region FaeA PF04703.12 gi|21227136|ref|NP_633058.1| - 0.059 13.8 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein TFIIE_alpha PF02002.17 gi|21227136|ref|NP_633058.1| - 0.072 13.0 0.0 0.15 11.9 0.0 1.6 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_10 PF04967.12 gi|21227136|ref|NP_633058.1| - 0.076 12.8 0.0 0.21 11.4 0.0 1.7 2 0 0 2 2 1 0 HTH DNA binding domain DUF4093 PF13331.6 gi|21227136|ref|NP_633058.1| - 0.092 13.2 0.1 5.8 7.4 0.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4093) Sigma70_r3 PF04539.16 gi|21227136|ref|NP_633058.1| - 0.095 12.8 0.1 0.39 10.8 0.0 1.9 2 0 0 2 2 2 0 Sigma-70 region 3 AAA_assoc_C PF09821.9 gi|21227136|ref|NP_633058.1| - 0.11 13.1 0.0 0.18 12.4 0.0 1.5 1 0 0 1 1 1 0 C-terminal AAA-associated domain FeoC PF09012.10 gi|21227136|ref|NP_633058.1| - 0.15 12.2 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator Acetyltransf_1 PF00583.25 gi|21227137|ref|NP_633059.1| - 2.9e-14 53.3 0.0 3.8e-14 52.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21227137|ref|NP_633059.1| - 1.2e-11 44.9 0.0 2.1e-11 44.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21227137|ref|NP_633059.1| - 5.8e-11 42.4 0.0 7.5e-11 42.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|21227137|ref|NP_633059.1| - 1.5e-05 25.1 0.0 0.00032 20.8 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|21227137|ref|NP_633059.1| - 4e-05 23.8 0.0 7.3e-05 23.0 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21227137|ref|NP_633059.1| - 0.00017 21.7 0.0 0.00025 21.1 0.0 1.2 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 gi|21227137|ref|NP_633059.1| - 0.00078 20.1 0.0 0.0012 19.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21227137|ref|NP_633059.1| - 0.0031 17.5 0.0 0.0095 15.9 0.0 1.9 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.7 gi|21227137|ref|NP_633059.1| - 0.072 13.2 0.0 0.096 12.8 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain BioY PF02632.14 gi|21227138|ref|NP_633060.1| - 4.1e-41 140.2 18.0 6.7e-41 139.5 18.0 1.3 1 0 0 1 1 1 1 BioY family DUF2269 PF10027.9 gi|21227138|ref|NP_633060.1| - 0.058 13.4 3.3 0.093 12.8 1.7 2.1 2 1 0 2 2 2 0 Predicted integral membrane protein (DUF2269) ABC_tran PF00005.27 gi|21227139|ref|NP_633061.1| - 6.7e-28 97.9 0.0 1.1e-27 97.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21227139|ref|NP_633061.1| - 2e-10 41.0 0.1 3.7e-05 23.7 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21227139|ref|NP_633061.1| - 9.9e-10 38.2 0.3 1.6e-08 34.3 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|21227139|ref|NP_633061.1| - 0.0033 17.7 0.2 0.11 12.8 0.1 2.7 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|21227139|ref|NP_633061.1| - 0.01 15.6 0.2 0.021 14.6 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|21227139|ref|NP_633061.1| - 0.017 14.8 0.2 0.2 11.3 0.1 2.1 2 0 0 2 2 2 0 AAA ATPase domain RecA PF00154.21 gi|21227139|ref|NP_633061.1| - 0.019 14.4 0.3 4.2 6.8 0.0 2.4 1 1 1 2 2 2 0 recA bacterial DNA recombination protein DUF126 PF01989.16 gi|21227139|ref|NP_633061.1| - 0.029 14.1 0.0 0.22 11.4 0.0 2.3 2 0 0 2 2 2 0 Aconitase X swivel domain AAA_24 PF13479.6 gi|21227139|ref|NP_633061.1| - 0.056 13.2 0.3 0.25 11.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|21227139|ref|NP_633061.1| - 0.14 11.7 0.0 0.91 9.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|21227139|ref|NP_633061.1| - 0.14 11.8 0.0 15 5.3 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_23 PF13476.6 gi|21227139|ref|NP_633061.1| - 0.14 12.6 0.1 0.32 11.5 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|21227139|ref|NP_633061.1| - 0.17 12.4 0.5 6.9 7.2 0.1 2.7 2 1 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|21227140|ref|NP_633062.1| - 1e-30 107.0 0.0 2.1e-30 106.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21227140|ref|NP_633062.1| - 2.2e-07 31.0 0.0 0.00033 20.6 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|21227140|ref|NP_633062.1| - 1.1e-05 26.1 0.1 0.00016 22.2 0.1 2.1 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|21227140|ref|NP_633062.1| - 5.2e-05 22.4 0.0 0.0001 21.4 0.0 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 gi|21227140|ref|NP_633062.1| - 0.0019 17.9 0.1 0.0039 16.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|21227140|ref|NP_633062.1| - 0.0028 18.1 0.0 0.0047 17.3 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|21227140|ref|NP_633062.1| - 0.0033 17.7 0.0 0.0082 16.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|21227140|ref|NP_633062.1| - 0.011 15.2 0.0 0.11 11.9 0.0 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|21227140|ref|NP_633062.1| - 0.086 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase DUF5321 PF17254.2 gi|21227140|ref|NP_633062.1| - 0.2 11.1 3.8 1 8.8 0.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5321) CbiQ PF02361.16 gi|21227141|ref|NP_633063.1| - 2.3e-35 122.2 9.8 3e-35 121.8 9.8 1.1 1 0 0 1 1 1 1 Cobalt transport protein HTH_5 PF01022.20 gi|21227142|ref|NP_633064.1| - 8.2e-17 60.8 1.4 1.4e-16 60.1 1.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21227142|ref|NP_633064.1| - 1.8e-11 43.9 1.2 3.3e-11 43.1 1.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Arg_repressor PF01316.21 gi|21227142|ref|NP_633064.1| - 0.00015 21.5 0.1 0.00031 20.4 0.1 1.5 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain MarR_2 PF12802.7 gi|21227142|ref|NP_633064.1| - 0.00036 20.3 0.5 0.00069 19.5 0.5 1.5 1 1 0 1 1 1 1 MarR family TrmB PF01978.19 gi|21227142|ref|NP_633064.1| - 0.00037 20.3 0.0 0.00064 19.6 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_WhiA PF02650.14 gi|21227142|ref|NP_633064.1| - 0.0073 16.6 0.4 0.012 16.0 0.4 1.3 1 0 0 1 1 1 1 WhiA C-terminal HTH domain HTH_34 PF13601.6 gi|21227142|ref|NP_633064.1| - 0.016 15.3 0.1 0.042 14.0 0.0 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_1 PF00126.27 gi|21227142|ref|NP_633064.1| - 0.035 14.1 0.1 0.1 12.5 0.1 1.8 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF4423 PF14394.6 gi|21227142|ref|NP_633064.1| - 0.061 13.0 0.3 0.24 11.1 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) HTH_11 PF08279.12 gi|21227142|ref|NP_633064.1| - 0.065 13.2 0.1 0.18 11.8 0.1 1.9 1 1 0 1 1 1 0 HTH domain MarR PF01047.22 gi|21227142|ref|NP_633064.1| - 0.09 12.7 0.3 0.09 12.7 0.3 1.7 2 0 0 2 2 2 0 MarR family ArsP_1 PF03773.13 gi|21227143|ref|NP_633065.1| - 2.7e-52 177.8 2.8 3.6e-52 177.3 2.8 1.1 1 0 0 1 1 1 1 Predicted permease PspC PF04024.12 gi|21227144|ref|NP_633066.1| - 1.3e-22 79.3 0.8 1.7e-22 79.0 0.8 1.1 1 0 0 1 1 1 1 PspC domain HTH_32 PF13565.6 gi|21227145|ref|NP_633067.1| - 7.4e-16 58.5 0.1 2.4e-13 50.5 0.0 2.1 2 0 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 gi|21227145|ref|NP_633067.1| - 1.2e-12 47.7 0.1 9.7e-12 44.7 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|21227145|ref|NP_633067.1| - 7e-08 32.0 0.1 5.3e-06 26.1 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|21227145|ref|NP_633067.1| - 0.0089 16.1 0.0 0.2 11.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21227145|ref|NP_633067.1| - 0.048 13.6 0.2 0.45 10.5 0.0 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain DDE_3 PF13358.6 gi|21227146|ref|NP_633068.1| - 1.9e-28 99.0 0.0 2.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease Aminotran_4 PF01063.19 gi|21227147|ref|NP_633069.1| - 3.1e-57 194.0 0.0 3.6e-57 193.8 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV Ig_J_chain PF15097.6 gi|21227147|ref|NP_633069.1| - 0.033 14.1 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin J chain PBP_like PF12727.7 gi|21227148|ref|NP_633070.1| - 2e-49 167.4 0.4 4.8e-49 166.1 0.0 1.8 2 0 0 2 2 2 1 PBP superfamily domain MoeA_N PF03453.17 gi|21227148|ref|NP_633070.1| - 6.7e-46 155.9 0.8 1.1e-45 155.2 0.8 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|21227148|ref|NP_633070.1| - 7.5e-25 87.3 0.1 1.7e-24 86.1 0.0 1.7 2 0 0 2 2 2 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|21227148|ref|NP_633070.1| - 2e-14 53.5 0.0 1.2e-13 51.0 0.0 2.4 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) T2SSE PF00437.20 gi|21227148|ref|NP_633070.1| - 0.015 14.4 0.0 0.026 13.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Phosphonate-bd PF12974.7 gi|21227148|ref|NP_633070.1| - 0.023 14.3 0.0 0.044 13.4 0.0 1.5 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein MMR_HSR1_Xtn PF16897.5 gi|21227149|ref|NP_633071.1| - 1.1e-34 118.6 0.3 2e-34 117.8 0.3 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|21227149|ref|NP_633071.1| - 2.5e-20 72.6 0.1 4.7e-20 71.8 0.1 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 gi|21227149|ref|NP_633071.1| - 6.3e-17 61.4 0.0 1.3e-16 60.3 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|21227149|ref|NP_633071.1| - 1e-11 44.6 0.1 3.1e-11 43.0 0.1 1.8 2 1 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|21227149|ref|NP_633071.1| - 8.8e-05 22.5 0.6 0.085 12.8 0.2 2.6 2 0 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 gi|21227149|ref|NP_633071.1| - 0.0038 17.3 3.1 0.59 10.2 0.3 3.1 2 1 1 3 3 3 2 Dynamin family Phage_B PF02304.15 gi|21227149|ref|NP_633071.1| - 0.0051 17.2 0.0 0.014 15.8 0.0 1.7 1 0 0 1 1 1 1 Scaffold protein B AIG1 PF04548.16 gi|21227149|ref|NP_633071.1| - 0.033 13.5 0.6 0.051 12.9 0.0 1.6 2 0 0 2 2 2 0 AIG1 family MeaB PF03308.16 gi|21227149|ref|NP_633071.1| - 0.083 11.9 0.4 0.54 9.2 0.5 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SRPRB PF09439.10 gi|21227149|ref|NP_633071.1| - 0.13 11.7 0.0 0.31 10.5 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 gi|21227149|ref|NP_633071.1| - 0.21 12.0 0.2 0.53 10.6 0.2 1.6 1 0 0 1 1 1 0 AAA ATPase domain FlxA PF14282.6 gi|21227149|ref|NP_633071.1| - 0.49 10.4 4.1 3.5 7.7 4.7 1.9 1 1 1 2 2 2 0 FlxA-like protein DUF1192 PF06698.11 gi|21227149|ref|NP_633071.1| - 0.59 10.2 4.6 0.24 11.5 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) Dala_Dala_lig_C PF07478.13 gi|21227150|ref|NP_633072.1| - 5.6e-25 88.1 0.0 9e-25 87.4 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Methyltransf_25 PF13649.6 gi|21227150|ref|NP_633072.1| - 5.3e-23 81.6 0.0 5.2e-22 78.4 0.0 2.5 3 0 0 3 3 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21227150|ref|NP_633072.1| - 1.6e-18 67.1 0.0 4.1e-18 65.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227150|ref|NP_633072.1| - 2.7e-17 63.0 0.0 4.6e-17 62.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21227150|ref|NP_633072.1| - 2.4e-14 53.3 0.0 3.7e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|21227150|ref|NP_633072.1| - 9.1e-11 41.9 0.0 2.4e-10 40.5 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21227150|ref|NP_633072.1| - 1.3e-07 32.2 0.0 2.2e-06 28.3 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain TehB PF03848.14 gi|21227150|ref|NP_633072.1| - 1.7e-05 24.3 0.0 2.8e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_2 PF00891.18 gi|21227150|ref|NP_633072.1| - 0.00024 20.5 0.0 0.00041 19.7 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain MTS PF05175.14 gi|21227150|ref|NP_633072.1| - 0.00062 19.4 0.0 0.0011 18.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|21227150|ref|NP_633072.1| - 0.0015 17.9 0.0 0.0024 17.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase ATPgrasp_Ter PF15632.6 gi|21227150|ref|NP_633072.1| - 0.0035 17.1 0.0 0.65 9.7 0.0 2.6 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon Pox_MCEL PF03291.16 gi|21227150|ref|NP_633072.1| - 0.0083 15.3 0.0 0.074 12.1 0.0 2.0 1 1 0 1 1 1 1 mRNA capping enzyme ATP-grasp_4 PF13535.6 gi|21227150|ref|NP_633072.1| - 0.018 14.7 0.0 0.21 11.2 0.0 2.2 2 0 0 2 2 2 0 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|21227150|ref|NP_633072.1| - 0.023 14.7 0.0 0.055 13.5 0.0 1.6 1 1 0 1 1 1 0 ATP-grasp domain Methyltransf_4 PF02390.17 gi|21227150|ref|NP_633072.1| - 0.09 12.2 0.0 0.54 9.7 0.0 2.1 2 0 0 2 2 2 0 Putative methyltransferase CheR PF01739.18 gi|21227150|ref|NP_633072.1| - 0.17 11.3 0.0 0.34 10.4 0.0 1.4 1 0 0 1 1 1 0 CheR methyltransferase, SAM binding domain CitMHS PF03600.16 gi|21227151|ref|NP_633073.1| - 1e-32 113.5 24.2 1e-32 113.5 24.2 2.0 1 1 1 2 2 2 1 Citrate transporter MC1 PF05854.11 gi|21227153|ref|NP_633075.1| - 2.7e-39 133.3 1.1 3.1e-39 133.2 1.1 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 HicB_lk_antitox PF15919.5 gi|21227154|ref|NP_633076.1| - 0.0027 17.8 0.0 0.0034 17.5 0.0 1.2 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system PHD_like PF12910.7 gi|21227154|ref|NP_633076.1| - 0.018 15.0 0.1 0.024 14.6 0.1 1.2 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system Humanin PF15040.6 gi|21227154|ref|NP_633076.1| - 0.11 12.0 0.8 0.29 10.6 0.0 1.9 2 0 0 2 2 2 0 Humanin family PAS_3 PF08447.12 gi|21227155|ref|NP_633077.1| - 5.5e-39 132.4 2.5 6.5e-18 64.8 0.2 3.2 3 0 0 3 3 3 2 PAS fold DUF2111 PF09884.9 gi|21227155|ref|NP_633077.1| - 5.9e-32 109.6 0.3 4.3e-31 106.8 0.2 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2111) PAS_9 PF13426.7 gi|21227155|ref|NP_633077.1| - 1.3e-12 47.8 2.4 2.5e-05 24.5 0.1 3.3 3 0 0 3 3 3 3 PAS domain GAF_2 PF13185.6 gi|21227155|ref|NP_633077.1| - 1.4e-11 44.8 0.0 3.1e-09 37.3 0.0 2.6 2 0 0 2 2 2 1 GAF domain PAS PF00989.25 gi|21227155|ref|NP_633077.1| - 1.1e-10 41.5 2.0 0.00026 21.0 0.1 3.0 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.10 gi|21227155|ref|NP_633077.1| - 2.8e-09 37.2 0.1 0.0013 19.0 0.0 3.4 3 0 0 3 3 3 2 PAS fold PAS_11 PF14598.6 gi|21227155|ref|NP_633077.1| - 4.5e-05 23.5 0.0 0.091 12.9 0.0 2.5 2 0 0 2 2 2 2 PAS domain GAF_3 PF13492.6 gi|21227155|ref|NP_633077.1| - 0.00017 21.9 0.0 0.00039 20.8 0.0 1.6 1 0 0 1 1 1 1 GAF domain VanY PF02557.17 gi|21227155|ref|NP_633077.1| - 0.0007 19.4 0.1 0.18 11.6 0.0 2.8 3 0 0 3 3 3 1 D-alanyl-D-alanine carboxypeptidase GAF PF01590.26 gi|21227155|ref|NP_633077.1| - 0.0012 19.5 0.0 0.0073 16.9 0.0 2.2 2 0 0 2 2 2 1 GAF domain Melibiase_2_C PF17450.2 gi|21227155|ref|NP_633077.1| - 0.035 14.3 0.0 11 6.3 0.0 2.7 2 0 0 2 2 2 0 Alpha galactosidase A C-terminal beta sandwich domain DUF3654 PF12376.8 gi|21227155|ref|NP_633077.1| - 0.037 14.2 0.3 0.19 11.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3654) DUF3155 PF11352.8 gi|21227155|ref|NP_633077.1| - 0.044 14.2 0.2 16 6.0 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3155) NosD PF05048.13 gi|21227156|ref|NP_633078.1| - 1.1e-79 267.1 86.9 1.7e-34 119.2 29.1 4.1 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21227156|ref|NP_633078.1| - 9.9e-51 171.7 90.7 1.4e-18 67.2 17.3 4.2 1 1 3 4 4 4 4 Right handed beta helix region Pectinesterase PF01095.19 gi|21227156|ref|NP_633078.1| - 0.0015 17.3 0.2 0.005 15.6 0.1 1.9 2 0 0 2 2 2 1 Pectinesterase B12-binding PF02310.19 gi|21227157|ref|NP_633079.1| - 5.1e-20 71.7 0.2 6.3e-20 71.4 0.2 1.1 1 0 0 1 1 1 1 B12 binding domain Peripla_BP_6 PF13458.6 gi|21227157|ref|NP_633079.1| - 0.00063 19.5 0.1 0.00083 19.1 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein PTS_IIB PF02302.17 gi|21227157|ref|NP_633079.1| - 0.03 15.0 0.8 1.2 9.8 0.1 2.3 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit ABC2_membrane_3 PF12698.7 gi|21227158|ref|NP_633080.1| - 2.6e-45 155.0 16.6 3e-45 154.8 16.6 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|21227158|ref|NP_633080.1| - 8.4e-15 54.8 16.2 2.3e-14 53.4 16.2 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|21227158|ref|NP_633080.1| - 6.5e-07 29.0 19.5 6.5e-07 29.0 19.5 2.7 2 1 1 3 3 3 1 ABC-2 type transporter Git3 PF11710.8 gi|21227158|ref|NP_633080.1| - 0.00059 19.7 6.0 0.088 12.6 4.2 2.3 2 0 0 2 2 2 2 G protein-coupled glucose receptor regulating Gpa2 ABC_tran PF00005.27 gi|21227159|ref|NP_633081.1| - 3.2e-28 98.9 0.0 6e-28 98.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.6 gi|21227159|ref|NP_633081.1| - 2e-15 57.3 0.2 6.3e-15 55.7 0.2 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|21227159|ref|NP_633081.1| - 1.7e-12 47.8 2.9 7.1e-07 29.3 0.2 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|21227159|ref|NP_633081.1| - 0.00048 20.5 0.0 0.0011 19.4 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|21227159|ref|NP_633081.1| - 0.00073 20.1 0.2 0.00073 20.1 0.2 2.4 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|21227159|ref|NP_633081.1| - 0.0024 17.6 0.0 0.012 15.4 0.0 2.0 1 1 1 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|21227159|ref|NP_633081.1| - 0.0026 18.0 0.3 0.011 16.1 0.2 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|21227159|ref|NP_633081.1| - 0.003 17.5 1.6 0.018 14.9 0.0 2.6 3 0 0 3 3 3 1 RsgA GTPase AAA_13 PF13166.6 gi|21227159|ref|NP_633081.1| - 0.0047 15.7 1.1 0.74 8.4 0.0 2.5 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.19 gi|21227159|ref|NP_633081.1| - 0.0096 15.4 0.2 1.2 8.5 0.0 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain ATPase_2 PF01637.18 gi|21227159|ref|NP_633081.1| - 0.013 15.5 0.1 0.025 14.5 0.1 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 gi|21227159|ref|NP_633081.1| - 0.016 15.1 0.4 0.26 11.2 0.0 2.4 2 1 1 3 3 3 0 NTPase AAA_29 PF13555.6 gi|21227159|ref|NP_633081.1| - 0.027 14.2 0.0 0.053 13.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|21227159|ref|NP_633081.1| - 0.044 14.2 0.5 0.18 12.2 0.4 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 gi|21227159|ref|NP_633081.1| - 0.064 13.5 0.0 0.14 12.4 0.0 1.6 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PIF1 PF05970.14 gi|21227159|ref|NP_633081.1| - 0.065 12.4 0.1 0.28 10.3 0.0 1.9 2 0 0 2 2 2 0 PIF1-like helicase TsaE PF02367.17 gi|21227159|ref|NP_633081.1| - 0.11 12.5 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_5 PF07728.14 gi|21227159|ref|NP_633081.1| - 0.11 12.5 0.1 0.57 10.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) cobW PF02492.19 gi|21227159|ref|NP_633081.1| - 0.14 11.8 0.7 0.36 10.4 0.1 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF2205 PF10224.9 gi|21227159|ref|NP_633081.1| - 5.7 7.0 6.6 3.1 7.8 0.1 2.8 3 0 0 3 3 3 0 Short coiled-coil protein RibD_C PF01872.17 gi|21227160|ref|NP_633082.1| - 1.2e-13 51.3 0.0 1.5e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 RibD C-terminal domain Proton_antipo_M PF00361.20 gi|21227161|ref|NP_633083.1| - 1.6e-61 208.1 22.0 1.6e-61 208.1 22.0 2.7 2 2 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|21227161|ref|NP_633083.1| - 0.0098 16.0 0.9 0.076 13.1 0.0 2.8 1 1 1 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF4267 PF14087.6 gi|21227161|ref|NP_633083.1| - 0.37 10.9 5.5 0.26 11.3 0.1 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4267) NADHdh PF00146.21 gi|21227162|ref|NP_633084.1| - 3.4e-35 121.8 20.0 4.5e-35 121.4 20.0 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Proton_antipo_M PF00361.20 gi|21227164|ref|NP_633086.1| - 7e-49 166.6 27.5 7e-49 166.6 27.5 2.3 3 0 0 3 3 3 1 Proton-conducting membrane transporter Complex1_49kDa PF00346.19 gi|21227165|ref|NP_633087.1| - 4.8e-41 140.6 0.0 7.6e-40 136.7 0.0 2.1 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 gi|21227165|ref|NP_633087.1| - 7.6e-18 65.3 0.0 1.3e-17 64.5 0.0 1.3 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NiFeSe_Hases PF00374.19 gi|21227165|ref|NP_633087.1| - 6.5e-08 31.9 0.1 0.0011 17.9 0.1 2.1 2 0 0 2 2 2 2 Nickel-dependent hydrogenase Oxidored_q6 PF01058.22 gi|21227166|ref|NP_633088.1| - 1.5e-22 79.8 0.0 2e-22 79.4 0.0 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1724 PF08350.10 gi|21227169|ref|NP_633091.1| - 2e-22 79.0 0.5 4e-22 78.1 0.5 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_11 PF08279.12 gi|21227169|ref|NP_633091.1| - 0.0014 18.5 0.1 0.0034 17.3 0.1 1.7 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|21227169|ref|NP_633091.1| - 0.0095 15.8 0.1 0.019 14.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|21227169|ref|NP_633091.1| - 0.025 14.6 0.1 0.058 13.4 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix JIP_LZII PF16471.5 gi|21227169|ref|NP_633091.1| - 0.028 14.6 0.1 5.6 7.2 0.0 2.5 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II TrmB PF01978.19 gi|21227169|ref|NP_633091.1| - 0.032 14.1 0.1 0.073 13.0 0.1 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|21227169|ref|NP_633091.1| - 0.042 14.3 0.0 0.086 13.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|21227169|ref|NP_633091.1| - 0.11 12.6 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Response_reg PF00072.24 gi|21227170|ref|NP_633092.1| - 1.7e-30 105.5 0.3 1.9e-30 105.3 0.3 1.0 1 0 0 1 1 1 1 Response regulator receiver domain NCD1 PF04904.13 gi|21227170|ref|NP_633092.1| - 0.13 12.3 0.1 8.1 6.5 0.0 2.2 2 0 0 2 2 2 0 NAB conserved region 1 (NCD1) E1-E2_ATPase PF00122.20 gi|21227171|ref|NP_633093.1| - 2.7e-50 170.4 0.1 2.7e-50 170.4 0.1 2.9 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|21227171|ref|NP_633093.1| - 1.6e-43 148.5 1.3 1.6e-43 148.5 1.3 2.3 2 1 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|21227171|ref|NP_633093.1| - 2.9e-23 83.3 0.8 2.2e-22 80.4 0.8 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|21227171|ref|NP_633093.1| - 9.6e-19 67.3 0.0 1.9e-18 66.3 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|21227171|ref|NP_633093.1| - 1.9e-18 65.9 0.5 5e-18 64.6 0.1 2.0 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|21227171|ref|NP_633093.1| - 1.3e-09 38.2 1.7 1.2e-05 25.2 1.6 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|21227171|ref|NP_633093.1| - 1.8e-05 25.2 0.0 3.6e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase URO-D PF01208.17 gi|21227172|ref|NP_633094.1| - 5.6e-87 292.1 0.0 6.2e-87 292.0 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) RACo_C_ter PF14574.6 gi|21227173|ref|NP_633095.1| - 2.3e-69 233.3 5.1 2.9e-68 229.8 5.3 2.1 2 0 0 2 2 2 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|21227173|ref|NP_633095.1| - 2.2e-09 37.2 0.0 6.6e-09 35.7 0.0 1.8 1 0 0 1 1 1 1 RACo middle region Fer4_7 PF12838.7 gi|21227173|ref|NP_633095.1| - 4.9e-06 27.0 22.9 0.00026 21.5 11.8 2.0 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227173|ref|NP_633095.1| - 2.8e-05 25.0 10.0 0.00053 20.9 2.4 2.8 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|21227173|ref|NP_633095.1| - 4e-05 23.7 10.5 8.5e-05 22.6 10.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21227173|ref|NP_633095.1| - 5.7e-05 22.8 3.9 5.7e-05 22.8 3.9 2.7 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21227173|ref|NP_633095.1| - 7e-05 22.9 22.0 0.00041 20.4 2.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21227173|ref|NP_633095.1| - 0.00011 22.1 12.2 0.017 15.2 3.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21227173|ref|NP_633095.1| - 0.00033 21.0 2.7 0.0063 16.9 0.1 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21227173|ref|NP_633095.1| - 0.00036 21.0 4.9 0.0063 17.0 0.2 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227173|ref|NP_633095.1| - 0.0039 17.2 11.9 0.24 11.6 3.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21227173|ref|NP_633095.1| - 0.0047 17.0 13.2 0.022 14.9 13.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|21227173|ref|NP_633095.1| - 0.0066 16.5 3.6 0.015 15.4 3.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain KH_7 PF17214.3 gi|21227173|ref|NP_633095.1| - 0.076 13.0 0.0 0.3 11.1 0.0 1.9 2 0 0 2 2 2 0 KH domain Fer4_4 PF12800.7 gi|21227173|ref|NP_633095.1| - 0.11 13.1 12.0 0.062 13.8 2.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain POTRA PF07244.15 gi|21227173|ref|NP_633095.1| - 0.12 13.0 0.0 0.54 10.9 0.0 2.1 2 0 0 2 2 2 0 Surface antigen variable number repeat Fer4_3 PF12798.7 gi|21227173|ref|NP_633095.1| - 0.28 12.2 18.4 0.59 11.2 7.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21227173|ref|NP_633095.1| - 6.6 7.0 9.7 26 5.0 9.7 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain cobW PF02492.19 gi|21227174|ref|NP_633096.1| - 3.9e-37 127.5 1.2 5.5e-37 127.0 1.2 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.22 gi|21227174|ref|NP_633096.1| - 0.00025 20.7 2.5 0.00075 19.2 0.5 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain CbiA PF01656.23 gi|21227174|ref|NP_633096.1| - 0.00051 20.1 2.8 0.0012 18.9 2.8 2.1 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|21227174|ref|NP_633096.1| - 0.0014 18.6 1.2 0.0026 17.7 1.2 1.6 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|21227174|ref|NP_633096.1| - 0.0022 17.0 0.4 0.0045 16.0 0.4 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB KTI12 PF08433.10 gi|21227174|ref|NP_633096.1| - 0.074 12.5 0.0 0.18 11.2 0.0 1.6 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DUF2922 PF11148.8 gi|21227174|ref|NP_633096.1| - 0.11 12.2 1.6 0.39 10.5 0.1 2.7 3 1 0 3 3 3 0 Protein of unknown function (DUF2922) Tim44 PF04280.15 gi|21227174|ref|NP_633096.1| - 0.13 12.4 0.0 11 6.2 0.0 2.3 2 0 0 2 2 2 0 Tim44-like domain LpxK PF02606.14 gi|21227174|ref|NP_633096.1| - 0.14 11.2 1.3 0.27 10.3 1.3 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase B12-binding PF02310.19 gi|21227175|ref|NP_633097.1| - 3.6e-16 59.3 0.1 5.4e-16 58.7 0.1 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|21227175|ref|NP_633097.1| - 1.3e-14 54.4 0.1 4.2e-14 52.7 0.1 1.9 1 0 0 1 1 1 1 B12 binding domain MtaB PF12176.8 gi|21227176|ref|NP_633098.1| - 1.4e-232 772.4 5.0 1.6e-232 772.2 5.0 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit Gpr1_Fun34_YaaH PF01184.19 gi|21227177|ref|NP_633099.1| - 8.4e-32 110.5 28.1 1.1e-31 110.1 28.1 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Cation_efflux PF01545.21 gi|21227178|ref|NP_633100.1| - 2e-21 76.6 5.6 2.5e-21 76.3 5.6 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|21227178|ref|NP_633100.1| - 9.7e-16 57.7 0.1 1.6e-15 57.0 0.1 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Cas_Cas4 PF01930.17 gi|21227178|ref|NP_633100.1| - 0.14 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF83 Hydantoinase_A PF01968.18 gi|21227179|ref|NP_633101.1| - 2.1e-33 115.8 0.7 2.7e-31 108.9 0.1 3.0 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|21227179|ref|NP_633101.1| - 1.1e-31 109.9 1.4 5.5e-27 94.6 0.2 3.5 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|21227179|ref|NP_633101.1| - 4.7e-06 25.5 0.9 0.035 12.7 0.0 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|21227179|ref|NP_633101.1| - 0.0012 18.4 0.3 0.31 10.5 0.0 3.1 4 0 0 4 4 4 2 BadF/BadG/BcrA/BcrD ATPase family ROK PF00480.20 gi|21227179|ref|NP_633101.1| - 0.034 13.6 0.2 0.12 11.8 0.0 2.1 3 0 0 3 3 3 0 ROK family FtsA PF14450.6 gi|21227179|ref|NP_633101.1| - 0.069 13.6 0.3 3.6 8.0 0.1 2.8 2 0 0 2 2 2 0 Cell division protein FtsA StbA PF06406.11 gi|21227179|ref|NP_633101.1| - 0.14 11.4 0.1 0.29 10.3 0.1 1.4 1 0 0 1 1 1 0 StbA protein Hydant_A_N PF05378.13 gi|21227180|ref|NP_633102.1| - 1.7e-33 115.8 4.6 5.2e-29 101.2 0.4 3.9 3 1 0 3 3 3 2 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|21227180|ref|NP_633102.1| - 1e-31 110.3 4.3 2.7e-31 108.9 0.7 2.8 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|21227180|ref|NP_633102.1| - 3.4e-07 29.2 1.0 0.00023 19.9 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|21227180|ref|NP_633102.1| - 0.0027 17.3 2.4 0.024 14.2 0.7 2.7 2 1 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family ROK PF00480.20 gi|21227180|ref|NP_633102.1| - 0.0032 17.0 0.0 0.0081 15.7 0.0 1.7 1 0 0 1 1 1 1 ROK family FtsA PF14450.6 gi|21227180|ref|NP_633102.1| - 0.019 15.4 3.7 1.5 9.3 0.3 3.1 2 1 1 3 3 3 0 Cell division protein FtsA DprA_WH PF17782.1 gi|21227180|ref|NP_633102.1| - 0.032 14.4 0.1 0.24 11.6 0.1 2.2 1 1 1 2 2 2 0 DprA winged helix domain DUF1724 PF08350.10 gi|21227181|ref|NP_633103.1| - 5.5e-21 74.5 0.0 9.9e-21 73.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_45 PF14947.6 gi|21227181|ref|NP_633103.1| - 0.0022 18.0 0.6 0.011 15.8 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix SurA_N_3 PF13624.6 gi|21227181|ref|NP_633103.1| - 0.0066 16.3 0.3 0.023 14.5 0.1 1.8 2 0 0 2 2 2 1 SurA N-terminal domain MarR PF01047.22 gi|21227181|ref|NP_633103.1| - 0.0096 15.8 0.4 0.089 12.7 0.1 2.3 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|21227181|ref|NP_633103.1| - 0.0098 15.8 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|21227181|ref|NP_633103.1| - 0.076 13.0 1.6 0.2 11.6 0.6 2.2 2 0 0 2 2 2 0 HTH domain HTH_5 PF01022.20 gi|21227181|ref|NP_633103.1| - 0.12 12.3 0.1 0.27 11.1 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HemN_C PF06969.16 gi|21227181|ref|NP_633103.1| - 0.14 12.3 0.0 5 7.3 0.0 2.6 2 0 0 2 2 2 0 HemN C-terminal domain DUF1724 PF08350.10 gi|21227182|ref|NP_633104.1| - 4.8e-24 84.3 0.9 2.1e-23 82.2 0.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21227182|ref|NP_633104.1| - 0.00078 19.3 0.4 0.0015 18.3 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21227182|ref|NP_633104.1| - 0.025 14.6 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|21227182|ref|NP_633104.1| - 0.084 13.4 0.1 0.15 12.6 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Cupredoxin_1 PF13473.6 gi|21227183|ref|NP_633105.1| - 0.054 13.6 0.0 0.069 13.3 0.0 1.2 1 0 0 1 1 1 0 Cupredoxin-like domain MMR_HSR1_C PF08438.10 gi|21227184|ref|NP_633106.1| - 8.7e-34 116.5 0.0 1.5e-33 115.7 0.0 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|21227184|ref|NP_633106.1| - 3e-19 69.2 0.1 2.9e-18 66.0 0.0 2.4 2 1 0 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.21 gi|21227184|ref|NP_633106.1| - 1.2e-13 50.9 0.0 2.7e-13 49.7 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|21227184|ref|NP_633106.1| - 4.9e-09 35.9 0.9 5.2e-07 29.3 0.1 2.8 3 0 0 3 3 3 2 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 gi|21227184|ref|NP_633106.1| - 0.037 14.0 0.0 0.073 13.1 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Prenyltransf PF01255.19 gi|21227185|ref|NP_633107.1| - 7.4e-27 94.3 0.0 3.1e-26 92.3 0.0 1.8 1 1 1 2 2 2 1 Putative undecaprenyl diphosphate synthase DUF1922 PF09082.10 gi|21227186|ref|NP_633108.1| - 0.0019 18.5 0.6 0.0057 16.9 0.3 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1922) TF_Zn_Ribbon PF08271.12 gi|21227186|ref|NP_633108.1| - 0.0038 16.7 0.0 0.0099 15.4 0.0 1.7 1 0 0 1 1 1 1 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|21227186|ref|NP_633108.1| - 0.02 14.9 2.7 0.041 13.9 2.7 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Ogr_Delta PF04606.12 gi|21227186|ref|NP_633108.1| - 0.041 13.9 1.0 4.3 7.4 0.2 2.4 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-C4_Topoisom PF01396.19 gi|21227186|ref|NP_633108.1| - 0.074 12.8 1.4 5.3 6.9 0.1 2.4 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.6 gi|21227186|ref|NP_633108.1| - 0.082 12.3 1.4 20 4.8 0.0 3.1 3 0 0 3 3 3 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|21227186|ref|NP_633108.1| - 0.11 12.4 1.5 0.28 11.1 1.5 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF655 PF04919.12 gi|21227186|ref|NP_633108.1| - 0.11 12.4 0.0 1.7 8.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF655) C1_1 PF00130.22 gi|21227186|ref|NP_633108.1| - 0.12 12.3 2.5 0.21 11.5 2.5 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Lar_restr_allev PF14354.6 gi|21227186|ref|NP_633108.1| - 0.14 12.5 0.4 0.35 11.3 0.2 1.7 2 0 0 2 2 2 0 Restriction alleviation protein Lar zf_UBZ PF18439.1 gi|21227186|ref|NP_633108.1| - 0.16 11.6 0.7 9.8 5.9 0.1 2.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Ribosomal_S27e PF01667.17 gi|21227186|ref|NP_633108.1| - 0.17 11.6 3.8 0.091 12.5 1.6 1.6 2 0 0 2 2 2 0 Ribosomal protein S27 zinc_ribbon_10 PF10058.9 gi|21227186|ref|NP_633108.1| - 0.19 11.5 0.8 0.36 10.6 0.8 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-RING_9 PF13901.6 gi|21227186|ref|NP_633108.1| - 0.21 11.5 1.6 0.33 10.9 0.9 1.6 2 0 0 2 2 2 0 Putative zinc-RING and/or ribbon DNA_RNApol_7kD PF03604.13 gi|21227186|ref|NP_633108.1| - 0.3 10.8 2.4 0.65 9.7 2.4 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_4 PF13717.6 gi|21227186|ref|NP_633108.1| - 0.55 10.2 6.4 3 7.8 6.4 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|21227186|ref|NP_633108.1| - 0.73 9.2 3.4 1.5 8.2 3.4 1.5 1 0 0 1 1 1 0 Transcription factor zinc-finger zf-ACC PF17848.1 gi|21227186|ref|NP_633108.1| - 1.1 9.4 0.1 1.1 9.4 0.1 2.8 3 0 0 3 3 2 0 Acetyl-coA carboxylase zinc finger domain Zn-ribbon_8 PF09723.10 gi|21227186|ref|NP_633108.1| - 2.9 8.1 4.8 36 4.6 4.8 2.6 1 1 0 1 1 1 0 Zinc ribbon domain eIF-5_eIF-2B PF01873.17 gi|21227186|ref|NP_633108.1| - 5.5 6.9 6.1 2.1 8.2 2.2 2.0 2 0 0 2 2 2 0 Domain found in IF2B/IF5 NRD1_2 PF01995.16 gi|21227187|ref|NP_633109.1| - 2.1e-94 315.2 0.5 2.8e-94 314.8 0.5 1.2 1 0 0 1 1 1 1 NrpR regulatory domains NRD1 and 2 HTH_12 PF08461.10 gi|21227187|ref|NP_633109.1| - 4.1e-32 109.9 0.8 9e-32 108.8 0.8 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_21 PF13276.6 gi|21227187|ref|NP_633109.1| - 0.014 15.5 0.6 0.024 14.7 0.6 1.4 1 0 0 1 1 1 0 HTH-like domain HTH_20 PF12840.7 gi|21227187|ref|NP_633109.1| - 0.13 12.4 0.0 0.35 11.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Lactamase_B PF00753.27 gi|21227188|ref|NP_633110.1| - 2.4e-13 50.5 0.0 3.6e-13 50.0 0.0 1.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|21227188|ref|NP_633110.1| - 8e-09 35.3 0.0 9.2e-09 35.1 0.0 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|21227188|ref|NP_633110.1| - 0.0074 15.7 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain ABC_tran PF00005.27 gi|21227189|ref|NP_633111.1| - 2.6e-21 76.6 0.0 6.7e-21 75.2 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|21227189|ref|NP_633111.1| - 9e-08 32.3 0.0 0.00056 19.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21227189|ref|NP_633111.1| - 1.9e-05 24.2 0.1 0.0024 17.4 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|21227189|ref|NP_633111.1| - 0.0015 19.1 0.1 0.0032 18.0 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_27 PF13514.6 gi|21227189|ref|NP_633111.1| - 0.004 16.8 0.0 0.0063 16.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|21227189|ref|NP_633111.1| - 0.011 15.5 0.4 0.023 14.4 0.0 1.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|21227189|ref|NP_633111.1| - 0.019 14.9 0.0 0.035 14.0 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_13 PF13166.6 gi|21227189|ref|NP_633111.1| - 0.038 12.6 0.1 0.051 12.2 0.1 1.1 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|21227189|ref|NP_633111.1| - 0.068 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_15 PF13175.6 gi|21227189|ref|NP_633111.1| - 0.083 12.6 0.0 0.18 11.5 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain EF-hand_10 PF14788.6 gi|21227189|ref|NP_633111.1| - 0.16 11.9 0.0 0.72 9.8 0.0 2.0 2 0 0 2 2 2 0 EF hand UPF0051 PF01458.17 gi|21227190|ref|NP_633112.1| - 1.4e-54 185.1 0.0 2.1e-54 184.5 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ATPase PF06745.13 gi|21227191|ref|NP_633113.1| - 2.4e-30 105.6 0.1 2.7e-30 105.4 0.1 1.0 1 0 0 1 1 1 1 KaiC RecA PF00154.21 gi|21227191|ref|NP_633113.1| - 6.6e-06 25.8 0.0 7.6e-06 25.6 0.0 1.0 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|21227191|ref|NP_633113.1| - 0.0004 20.0 0.0 0.00042 19.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|21227191|ref|NP_633113.1| - 0.0018 17.6 0.1 0.0021 17.3 0.1 1.1 1 0 0 1 1 1 1 Rad51 DnaB_C PF03796.15 gi|21227191|ref|NP_633113.1| - 0.0022 17.4 0.0 0.0026 17.1 0.0 1.0 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain ATPase PF06745.13 gi|21227192|ref|NP_633114.1| - 7e-76 254.6 2.8 2.1e-41 141.8 0.0 2.6 3 0 0 3 3 3 2 KaiC AAA_25 PF13481.6 gi|21227192|ref|NP_633114.1| - 2.5e-07 30.5 0.0 1.1e-06 28.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain DnaB_C PF03796.15 gi|21227192|ref|NP_633114.1| - 3.7e-07 29.7 0.2 1.3e-06 28.0 0.0 2.0 3 0 0 3 3 2 1 DnaB-like helicase C terminal domain AAA_16 PF13191.6 gi|21227192|ref|NP_633114.1| - 3.9e-05 24.1 0.3 0.00084 19.8 0.0 2.8 3 0 0 3 3 3 1 AAA ATPase domain MEDS PF14417.6 gi|21227192|ref|NP_633114.1| - 5.1e-05 23.2 0.0 0.00015 21.7 0.0 1.7 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain GvpD PF07088.11 gi|21227192|ref|NP_633114.1| - 7.6e-05 21.5 0.0 0.19 10.3 0.0 2.2 2 0 0 2 2 2 2 GvpD gas vesicle protein RecA PF00154.21 gi|21227192|ref|NP_633114.1| - 0.00013 21.5 0.0 0.00022 20.8 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein NACHT PF05729.12 gi|21227192|ref|NP_633114.1| - 0.0018 18.2 0.0 0.0037 17.2 0.0 1.7 1 0 0 1 1 1 1 NACHT domain PAXNEB PF05625.11 gi|21227192|ref|NP_633114.1| - 0.0022 17.2 0.2 0.018 14.2 0.0 2.4 3 0 0 3 3 3 1 PAXNEB protein IstB_IS21 PF01695.17 gi|21227192|ref|NP_633114.1| - 0.0024 17.6 0.0 0.0059 16.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein GAS PF13851.6 gi|21227192|ref|NP_633114.1| - 0.0034 16.8 5.1 0.0055 16.1 5.1 1.2 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding AAA_14 PF13173.6 gi|21227192|ref|NP_633114.1| - 0.0053 16.8 0.0 0.026 14.6 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|21227192|ref|NP_633114.1| - 0.0055 16.4 0.2 0.019 14.7 0.0 2.1 2 1 0 2 2 1 1 AAA domain CobU PF02283.16 gi|21227192|ref|NP_633114.1| - 0.016 14.8 0.0 0.14 11.8 0.0 2.4 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase CLZ PF16526.5 gi|21227192|ref|NP_633114.1| - 0.017 15.5 4.9 0.041 14.2 4.9 1.6 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Phage_GPO PF05929.11 gi|21227192|ref|NP_633114.1| - 0.021 14.5 2.4 0.032 13.9 2.4 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase FliD_C PF07195.12 gi|21227192|ref|NP_633114.1| - 0.031 13.7 1.9 0.19 11.1 1.9 2.0 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus FlaC_arch PF05377.11 gi|21227192|ref|NP_633114.1| - 0.034 14.5 1.0 0.087 13.2 1.0 1.7 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) APG6_N PF17675.1 gi|21227192|ref|NP_633114.1| - 0.036 14.6 4.0 0.063 13.8 4.0 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Rad51 PF08423.11 gi|21227192|ref|NP_633114.1| - 0.04 13.2 0.1 0.088 12.1 0.1 1.5 1 0 0 1 1 1 0 Rad51 AAA_22 PF13401.6 gi|21227192|ref|NP_633114.1| - 0.04 14.2 0.1 0.2 11.9 0.0 2.3 2 1 0 2 2 2 0 AAA domain FrhB_FdhB_N PF04422.13 gi|21227192|ref|NP_633114.1| - 0.05 13.8 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term DUF3450 PF11932.8 gi|21227192|ref|NP_633114.1| - 0.05 12.9 6.3 0.074 12.4 6.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TrwB_AAD_bind PF10412.9 gi|21227192|ref|NP_633114.1| - 0.066 12.1 0.0 0.17 10.8 0.0 1.6 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Helo_like_N PF17111.5 gi|21227192|ref|NP_633114.1| - 0.067 12.6 0.6 0.14 11.5 0.6 1.4 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins AAA PF00004.29 gi|21227192|ref|NP_633114.1| - 0.067 13.6 0.1 0.37 11.2 0.0 2.4 2 2 1 3 3 1 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 gi|21227192|ref|NP_633114.1| - 0.086 12.0 0.0 0.17 11.0 0.0 1.5 1 1 0 1 1 1 0 G-protein alpha subunit Sigma54_activat PF00158.26 gi|21227192|ref|NP_633114.1| - 0.091 12.5 0.0 0.31 10.7 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain CbiA PF01656.23 gi|21227192|ref|NP_633114.1| - 0.1 12.6 0.1 1.2 9.2 0.0 2.6 3 1 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain bZIP_1 PF00170.21 gi|21227192|ref|NP_633114.1| - 0.11 12.6 4.1 0.26 11.4 4.1 1.7 1 0 0 1 1 1 0 bZIP transcription factor TsaE PF02367.17 gi|21227192|ref|NP_633114.1| - 0.11 12.5 0.0 0.35 10.9 0.0 1.8 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATP-synt_ab PF00006.25 gi|21227192|ref|NP_633114.1| - 0.14 11.8 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain YabA PF06156.13 gi|21227192|ref|NP_633114.1| - 0.16 12.6 0.9 0.34 11.6 0.9 1.6 1 0 0 1 1 1 0 Initiation control protein YabA Spc24 PF08286.11 gi|21227192|ref|NP_633114.1| - 0.22 11.8 2.8 0.47 10.7 2.8 1.6 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 V_ATPase_I PF01496.19 gi|21227192|ref|NP_633114.1| - 0.24 9.3 0.4 0.33 8.8 0.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family AAA_23 PF13476.6 gi|21227192|ref|NP_633114.1| - 0.25 11.8 3.6 4.6 7.7 0.6 2.3 2 0 0 2 2 2 0 AAA domain DUF4407 PF14362.6 gi|21227192|ref|NP_633114.1| - 0.45 9.8 4.5 0.66 9.3 4.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GrpE PF01025.19 gi|21227192|ref|NP_633114.1| - 0.86 9.2 4.5 1.6 8.3 3.4 2.0 2 1 0 2 2 2 0 GrpE KaiB PF07689.12 gi|21227193|ref|NP_633115.1| - 6.1e-26 90.0 0.0 9.5e-26 89.4 0.0 1.3 1 0 0 1 1 1 1 KaiB domain KaiB PF07689.12 gi|21227194|ref|NP_633116.1| - 1.7e-21 75.7 0.0 2.2e-21 75.4 0.0 1.2 1 0 0 1 1 1 1 KaiB domain PAS_9 PF13426.7 gi|21227195|ref|NP_633117.1| - 4.7e-46 155.3 0.3 7e-19 68.0 0.0 4.8 4 0 0 4 4 4 4 PAS domain PAS PF00989.25 gi|21227195|ref|NP_633117.1| - 5.2e-38 129.5 0.1 4.7e-15 55.6 0.0 5.4 5 0 0 5 5 5 5 PAS fold PAS_3 PF08447.12 gi|21227195|ref|NP_633117.1| - 3.7e-34 116.9 0.0 2e-19 69.7 0.0 3.7 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.12 gi|21227195|ref|NP_633117.1| - 6e-32 109.6 0.7 2.5e-31 107.6 0.7 2.2 1 0 0 1 1 1 1 Histidine kinase PAS_4 PF08448.10 gi|21227195|ref|NP_633117.1| - 6.4e-32 110.1 0.0 2.3e-11 43.9 0.0 5.5 4 1 0 4 4 4 4 PAS fold PAS_8 PF13188.7 gi|21227195|ref|NP_633117.1| - 1.4e-22 79.2 0.0 8.1e-12 44.9 0.0 4.3 4 0 0 4 4 4 3 PAS domain PAS_7 PF12860.7 gi|21227195|ref|NP_633117.1| - 5.2e-12 45.9 0.0 0.008 16.3 0.0 5.7 6 1 0 6 6 6 3 PAS fold PAS_10 PF13596.6 gi|21227195|ref|NP_633117.1| - 1.9e-08 34.8 0.0 0.0043 17.6 0.0 4.4 5 0 0 5 5 3 2 PAS domain HATPase_c PF02518.26 gi|21227195|ref|NP_633117.1| - 2.9e-07 31.0 0.1 1.1e-06 29.2 0.1 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.6 gi|21227195|ref|NP_633117.1| - 2.3e-06 27.7 0.0 0.18 11.9 0.0 3.7 3 0 0 3 3 3 2 PAS domain RolB_RolC PF02027.17 gi|21227195|ref|NP_633117.1| - 0.00047 19.9 0.4 0.8 9.3 0.0 2.6 2 0 0 2 2 2 2 RolB/RolC glucosidase family HWE_HK PF07536.14 gi|21227195|ref|NP_633117.1| - 0.00068 20.3 0.1 0.0026 18.4 0.1 2.1 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|21227195|ref|NP_633117.1| - 0.00089 19.2 0.0 0.003 17.5 0.0 1.9 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_12 PF18095.1 gi|21227195|ref|NP_633117.1| - 0.0067 16.1 0.0 0.03 14.0 0.0 2.1 2 0 0 2 2 2 1 UPF0242 C-terminal PAS-like domain COP23 PF14218.6 gi|21227195|ref|NP_633117.1| - 0.05 13.4 0.1 1.1 9.0 0.0 2.9 3 0 0 3 3 3 0 Circadian oscillating protein COP23 DUF5344 PF17279.2 gi|21227195|ref|NP_633117.1| - 9.1 6.9 8.8 0.43 11.2 0.6 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5344) TrmB PF01978.19 gi|21227196|ref|NP_633118.1| - 6.5e-05 22.7 0.0 0.0001 22.1 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 gi|21227196|ref|NP_633118.1| - 0.00083 19.3 0.6 0.0048 16.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.22 gi|21227196|ref|NP_633118.1| - 0.0012 18.7 0.3 0.0019 18.1 0.1 1.6 2 0 0 2 2 2 1 MarR family Fe_dep_repress PF01325.19 gi|21227196|ref|NP_633118.1| - 0.0014 18.8 0.5 0.003 17.7 0.1 1.8 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 gi|21227196|ref|NP_633118.1| - 0.0031 17.0 0.0 0.0048 16.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Penicillinase_R PF03965.16 gi|21227196|ref|NP_633118.1| - 0.0036 17.6 0.2 0.0057 17.0 0.2 1.4 1 1 0 1 1 1 1 Penicillinase repressor MarR_2 PF12802.7 gi|21227196|ref|NP_633118.1| - 0.0049 16.7 0.0 0.0074 16.2 0.0 1.3 1 0 0 1 1 1 1 MarR family DUF1122 PF06557.11 gi|21227196|ref|NP_633118.1| - 0.0057 16.1 0.1 0.0065 15.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1122) Rio2_N PF09202.11 gi|21227196|ref|NP_633118.1| - 0.0097 16.1 0.1 0.014 15.6 0.1 1.4 1 0 0 1 1 1 1 Rio2, N-terminal CmlA_N PF18456.1 gi|21227196|ref|NP_633118.1| - 0.03 13.6 0.0 2 7.7 0.0 2.0 1 1 0 2 2 2 0 Diiron non-heme beta-hydroxylase N-terminal domain Cullin_Nedd8 PF10557.9 gi|21227196|ref|NP_633118.1| - 0.038 14.0 1.1 0.065 13.3 0.2 1.8 2 0 0 2 2 2 0 Cullin protein neddylation domain TFIIE_alpha PF02002.17 gi|21227196|ref|NP_633118.1| - 0.041 13.7 2.4 0.057 13.3 1.6 1.5 1 1 1 2 2 2 0 TFIIE alpha subunit HTH_27 PF13463.6 gi|21227196|ref|NP_633118.1| - 0.14 12.6 0.0 0.21 12.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Fer4_5 PF12801.7 gi|21227197|ref|NP_633119.1| - 7.1e-15 54.7 9.4 7.6e-11 41.8 0.8 3.5 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4 PF00037.27 gi|21227197|ref|NP_633119.1| - 3.8e-09 36.0 13.0 5.2e-06 26.0 2.7 3.8 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21227197|ref|NP_633119.1| - 2.8e-08 33.8 17.5 0.00016 21.8 4.2 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227197|ref|NP_633119.1| - 5e-08 33.4 15.2 0.0026 18.3 1.8 3.3 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21227197|ref|NP_633119.1| - 5.1e-07 29.5 22.1 0.00044 20.2 5.2 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21227197|ref|NP_633119.1| - 3.2e-06 27.2 17.6 7.8e-05 22.7 3.3 2.6 2 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21227197|ref|NP_633119.1| - 3.5e-06 27.2 10.3 7.2e-06 26.2 10.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227197|ref|NP_633119.1| - 1.3e-05 25.0 12.5 0.00012 22.0 1.0 3.2 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21227197|ref|NP_633119.1| - 7.3e-05 22.8 23.8 0.00015 21.8 19.7 3.0 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227197|ref|NP_633119.1| - 8e-05 22.9 26.9 0.0024 18.2 5.8 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21227197|ref|NP_633119.1| - 0.00014 22.3 17.7 0.04 14.4 7.2 3.1 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227197|ref|NP_633119.1| - 0.00026 21.9 18.9 0.0057 17.6 2.0 3.1 3 1 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|21227197|ref|NP_633119.1| - 0.0015 18.9 16.0 0.076 13.5 4.2 2.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21227197|ref|NP_633119.1| - 0.0084 16.9 11.6 0.21 12.4 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21227197|ref|NP_633119.1| - 0.0097 16.8 3.2 0.0097 16.8 3.2 4.3 5 0 0 5 5 4 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|21227197|ref|NP_633119.1| - 0.079 13.5 17.7 0.28 11.7 2.6 2.8 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Cpn60_TCP1 PF00118.24 gi|21227198|ref|NP_633120.1| - 1.9e-178 594.1 19.8 2.3e-178 593.8 19.8 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF473 PF04322.12 gi|21227199|ref|NP_633121.1| - 7.5e-42 141.9 0.3 8.4e-42 141.7 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF473) PAC2 PF09754.9 gi|21227200|ref|NP_633122.1| - 3.6e-51 174.2 0.2 4.1e-51 174.0 0.2 1.0 1 0 0 1 1 1 1 PAC2 family DUF2536 PF10750.9 gi|21227200|ref|NP_633122.1| - 0.094 12.6 0.2 7.4 6.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2536) PK_C PF02887.16 gi|21227202|ref|NP_633124.1| - 2e-17 63.5 0.4 2.5e-17 63.2 0.4 1.1 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Asp_Glu_race PF01177.22 gi|21227202|ref|NP_633124.1| - 0.011 15.6 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 0 Asp/Glu/Hydantoin racemase TGT PF01702.18 gi|21227203|ref|NP_633125.1| - 2.6e-89 299.8 0.0 3.5e-89 299.4 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase DUF5591 PF17884.1 gi|21227203|ref|NP_633125.1| - 0.078 12.8 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5591) UbiA PF01040.18 gi|21227205|ref|NP_633127.1| - 4.1e-20 72.1 19.6 4.9e-20 71.9 19.6 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family FAD_binding_3 PF01494.19 gi|21227206|ref|NP_633128.1| - 3.4e-09 36.4 0.0 1.5e-05 24.5 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 gi|21227206|ref|NP_633128.1| - 4.6e-09 35.5 0.2 4.1e-07 29.1 0.1 2.2 2 0 0 2 2 2 1 HI0933-like protein DAO PF01266.24 gi|21227206|ref|NP_633128.1| - 5.4e-09 36.1 0.1 0.00017 21.3 0.0 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|21227206|ref|NP_633128.1| - 1.2e-08 34.6 0.1 2.2e-07 30.4 0.1 2.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|21227206|ref|NP_633128.1| - 2.3e-08 33.6 0.5 0.00022 20.6 0.0 2.7 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|21227206|ref|NP_633128.1| - 4.2e-07 29.3 0.0 6.2e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_oxidored PF12831.7 gi|21227206|ref|NP_633128.1| - 3.2e-06 26.8 0.1 7.2e-06 25.6 0.1 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|21227206|ref|NP_633128.1| - 0.00013 21.3 0.4 0.00023 20.5 0.0 1.7 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 gi|21227206|ref|NP_633128.1| - 0.00029 20.1 0.0 0.00073 18.7 0.0 1.7 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|21227206|ref|NP_633128.1| - 0.0011 19.2 0.0 0.0035 17.5 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|21227206|ref|NP_633128.1| - 0.0021 18.6 0.1 0.048 14.2 0.0 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|21227206|ref|NP_633128.1| - 0.0037 16.4 0.0 0.01 14.9 0.0 1.9 2 0 0 2 2 2 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|21227206|ref|NP_633128.1| - 0.051 12.4 0.0 3.1 6.5 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase AlaDh_PNT_C PF01262.21 gi|21227206|ref|NP_633128.1| - 0.093 12.0 0.3 0.44 9.8 0.0 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Radical_SAM PF04055.21 gi|21227207|ref|NP_633129.1| - 6.6e-20 72.2 0.0 9.4e-20 71.6 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|21227207|ref|NP_633129.1| - 1.5e-06 28.6 0.3 4.1e-06 27.2 0.3 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|21227207|ref|NP_633129.1| - 0.00091 19.5 0.0 0.0017 18.6 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|21227207|ref|NP_633129.1| - 0.0018 18.4 0.0 0.0039 17.3 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF3577 PF12101.8 gi|21227208|ref|NP_633130.1| - 0.0068 16.2 1.1 0.0068 16.2 1.1 2.6 1 1 1 3 3 3 1 Protein of unknown function (DUF3577) Sec34 PF04136.15 gi|21227208|ref|NP_633130.1| - 0.016 15.1 6.2 0.016 15.1 6.2 2.9 1 1 2 3 3 3 0 Sec34-like family MAD PF05557.13 gi|21227208|ref|NP_633130.1| - 1.6 7.0 40.6 4 5.7 10.4 2.0 1 1 1 2 2 2 0 Mitotic checkpoint protein CALCOCO1 PF07888.11 gi|21227208|ref|NP_633130.1| - 3.7 6.3 39.3 0.75 8.6 34.8 1.7 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Fez1 PF06818.15 gi|21227208|ref|NP_633130.1| - 3.7 7.9 36.3 4.5 7.7 15.3 2.5 1 1 1 2 2 2 0 Fez1 HAD PF12710.7 gi|21227209|ref|NP_633131.1| - 6.5e-22 78.8 0.0 8.1e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|21227209|ref|NP_633131.1| - 1.6e-19 71.1 0.4 2.3e-19 70.5 0.4 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|21227209|ref|NP_633131.1| - 4.6e-11 42.9 0.1 4.9e-09 36.3 0.0 2.7 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|21227209|ref|NP_633131.1| - 4.8e-07 30.0 0.2 2.8e-05 24.3 0.2 2.8 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|21227209|ref|NP_633131.1| - 4.1e-06 26.4 0.0 0.012 15.0 0.0 2.1 2 0 0 2 2 2 2 Putative Phosphatase S6PP PF05116.13 gi|21227209|ref|NP_633131.1| - 0.00066 19.3 0.1 0.069 12.7 0.0 2.1 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase DUF373 PF04123.13 gi|21227209|ref|NP_633131.1| - 0.035 13.5 0.0 0.055 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF705 PF05152.12 gi|21227209|ref|NP_633131.1| - 0.094 12.2 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF705) Ribosomal_S24e PF01282.19 gi|21227209|ref|NP_633131.1| - 0.13 12.3 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S24e MTD PF01993.18 gi|21227210|ref|NP_633132.1| - 5.5e-126 419.5 2.1 6.2e-126 419.3 2.1 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase CheD PF03975.13 gi|21227210|ref|NP_633132.1| - 0.088 12.9 0.1 0.18 11.9 0.1 1.5 1 0 0 1 1 1 0 CheD chemotactic sensory transduction DUF2111 PF09884.9 gi|21227211|ref|NP_633133.1| - 5.1e-34 116.2 0.2 7.6e-34 115.7 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) DUF166 PF02593.14 gi|21227212|ref|NP_633134.1| - 5e-61 206.1 0.0 5.7e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DapB_N PF01113.20 gi|21227212|ref|NP_633134.1| - 0.0046 17.1 0.0 0.017 15.2 0.0 1.9 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Thymidylate_kin PF02223.17 gi|21227213|ref|NP_633135.1| - 8.9e-45 152.6 0.0 1e-44 152.4 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_33 PF13671.6 gi|21227213|ref|NP_633135.1| - 3.6e-05 23.9 0.0 7.4e-05 22.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|21227213|ref|NP_633135.1| - 6.8e-05 23.4 0.0 0.00021 21.9 0.0 1.9 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|21227213|ref|NP_633135.1| - 0.00028 20.8 0.0 0.0015 18.4 0.0 1.9 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_28 PF13521.6 gi|21227213|ref|NP_633135.1| - 0.0003 21.1 0.0 0.00069 19.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|21227213|ref|NP_633135.1| - 0.00041 20.8 0.1 0.0074 16.7 0.0 2.5 2 1 0 2 2 2 1 AAA domain CPT PF07931.12 gi|21227213|ref|NP_633135.1| - 0.018 14.9 0.1 0.14 12.0 0.1 2.3 2 1 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_22 PF13401.6 gi|21227213|ref|NP_633135.1| - 0.029 14.7 0.0 0.054 13.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain CKS PF01111.19 gi|21227213|ref|NP_633135.1| - 0.089 13.1 0.0 0.18 12.1 0.0 1.5 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit NB-ARC PF00931.22 gi|21227213|ref|NP_633135.1| - 0.098 11.8 0.0 0.15 11.2 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain Zeta_toxin PF06414.12 gi|21227213|ref|NP_633135.1| - 0.12 11.6 0.1 1.3 8.3 0.0 2.3 3 0 0 3 3 3 0 Zeta toxin Cytidylate_kin PF02224.18 gi|21227213|ref|NP_633135.1| - 0.13 11.9 0.0 0.21 11.3 0.0 1.5 1 1 0 1 1 1 0 Cytidylate kinase AAA_24 PF13479.6 gi|21227213|ref|NP_633135.1| - 0.17 11.6 0.1 0.54 9.9 0.1 2.0 2 1 0 2 2 2 0 AAA domain His_biosynth PF00977.21 gi|21227215|ref|NP_633137.1| - 2.1e-31 109.1 0.0 2.5e-31 108.9 0.0 1.1 1 0 0 1 1 1 1 Histidine biosynthesis protein PRAI PF00697.22 gi|21227215|ref|NP_633137.1| - 0.022 14.5 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FMN_dh PF01070.18 gi|21227215|ref|NP_633137.1| - 0.15 11.1 2.3 0.52 9.3 0.1 2.0 2 0 0 2 2 2 0 FMN-dependent dehydrogenase 4HFCP_synth PF04476.13 gi|21227216|ref|NP_633138.1| - 2.4e-91 305.5 0.0 2.7e-91 305.3 0.0 1.0 1 0 0 1 1 1 1 4-HFC-P synthase YdjM PF04307.14 gi|21227217|ref|NP_633139.1| - 1.2e-17 63.7 1.9 1.3e-17 63.6 1.9 1.1 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Polysacc_deac_1 PF01522.21 gi|21227219|ref|NP_633141.1| - 7.9e-20 71.0 0.0 1.1e-19 70.6 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF3473 PF11959.8 gi|21227219|ref|NP_633141.1| - 8.4e-09 35.5 0.0 2.1e-08 34.2 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) DUF2334 PF10096.9 gi|21227219|ref|NP_633141.1| - 0.0026 17.5 0.0 0.0044 16.7 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Disaggr_repeat PF06848.11 gi|21227220|ref|NP_633142.1| - 1.5e-88 295.1 2.9 3.1e-88 294.1 2.9 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Pectate_lyase_3 PF12708.7 gi|21227220|ref|NP_633142.1| - 7.7e-14 52.0 8.4 7.7e-14 52.0 8.4 2.7 1 1 2 3 3 3 2 Pectate lyase superfamily protein Beta_helix PF13229.6 gi|21227220|ref|NP_633142.1| - 8e-10 38.8 21.7 8e-10 38.8 21.7 2.8 2 1 0 2 2 2 1 Right handed beta helix region Phage_integrase PF00589.22 gi|21227220|ref|NP_633142.1| - 0.064 13.0 0.0 11 5.8 0.0 2.3 2 0 0 2 2 2 0 Phage integrase family DUF966 PF06136.13 gi|21227220|ref|NP_633142.1| - 6.6 6.3 10.6 9.9 5.8 10.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Disaggr_assoc PF08480.10 gi|21227221|ref|NP_633143.1| - 6e-83 277.4 13.8 6e-83 277.4 13.8 2.6 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|21227221|ref|NP_633143.1| - 1e-16 61.2 40.2 1.9e-14 53.8 17.0 2.7 1 1 1 2 2 2 2 Right handed beta helix region Disaggr_repeat PF06848.11 gi|21227222|ref|NP_633144.1| - 5.2e-82 273.9 1.7 1e-81 272.9 1.7 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|21227222|ref|NP_633144.1| - 2.9e-77 258.9 5.5 2.9e-77 258.9 5.5 2.5 2 0 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.6 gi|21227222|ref|NP_633144.1| - 7.5e-15 55.1 35.5 1.1e-10 41.5 19.0 3.2 1 1 1 2 2 2 2 Right handed beta helix region CarboxypepD_reg PF13620.6 gi|21227222|ref|NP_633144.1| - 0.023 15.0 0.1 0.052 13.8 0.1 1.6 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain DUF5123 PF17161.4 gi|21227222|ref|NP_633144.1| - 1.5 9.9 11.4 1.7 9.7 3.6 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF5123) Glycos_transf_2 PF00535.26 gi|21227223|ref|NP_633145.1| - 1.6e-28 99.7 0.0 1.8e-23 83.2 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|21227223|ref|NP_633145.1| - 4.4e-08 33.5 0.0 3.5e-05 24.2 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227223|ref|NP_633145.1| - 4.1e-05 23.6 0.0 0.00054 19.9 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|21227223|ref|NP_633145.1| - 0.00032 20.2 0.0 0.88 9.0 0.0 2.3 2 0 0 2 2 2 2 Glycosyltransferase like family 2 GFO_IDH_MocA PF01408.22 gi|21227224|ref|NP_633146.1| - 6.5e-29 101.2 0.0 1e-28 100.6 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|21227224|ref|NP_633146.1| - 2.7e-05 24.1 0.4 8.5e-05 22.5 0.1 2.0 2 0 0 2 2 2 1 Oxidoreductase family, C-terminal alpha/beta domain Semialdhyde_dh PF01118.24 gi|21227224|ref|NP_633146.1| - 0.00012 22.5 0.0 0.00023 21.6 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|21227224|ref|NP_633146.1| - 0.05 13.7 0.1 0.13 12.4 0.1 1.8 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus F420_oxidored PF03807.17 gi|21227224|ref|NP_633146.1| - 0.087 13.4 0.0 0.25 11.9 0.0 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 gi|21227224|ref|NP_633146.1| - 0.091 12.3 0.0 0.19 11.3 0.0 1.5 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Polysacc_synt_3 PF13440.6 gi|21227226|ref|NP_633148.1| - 8.8e-26 90.8 12.7 8.8e-26 90.8 12.7 2.2 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|21227226|ref|NP_633148.1| - 2.6e-16 59.8 20.6 2.6e-16 59.8 20.6 3.1 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Acetyltransf_6 PF13480.7 gi|21227227|ref|NP_633149.1| - 2.3e-13 50.5 0.0 1.3e-12 48.1 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|21227227|ref|NP_633149.1| - 0.02 13.8 0.0 5.8 5.7 0.0 2.5 2 1 1 3 3 3 0 FemAB family FemAB_like PF04339.12 gi|21227227|ref|NP_633149.1| - 0.049 12.8 0.0 0.089 11.9 0.0 1.3 1 0 0 1 1 1 0 Peptidogalycan biosysnthesis/recognition DUF4301 PF14134.6 gi|21227227|ref|NP_633149.1| - 0.21 10.4 0.0 0.31 9.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) Glycos_transf_1 PF00534.20 gi|21227228|ref|NP_633150.1| - 1.5e-34 119.0 0.0 3.6e-34 117.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227228|ref|NP_633150.1| - 1.5e-30 106.4 0.0 2.3e-30 105.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227228|ref|NP_633150.1| - 1.6e-18 67.3 0.0 2.3e-18 66.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|21227228|ref|NP_633150.1| - 8e-11 42.2 0.0 1.5e-10 41.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21227228|ref|NP_633150.1| - 1.9e-08 34.9 0.0 2.8e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|21227228|ref|NP_633150.1| - 9.4e-06 25.7 0.0 3.1e-05 24.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.26 gi|21227229|ref|NP_633151.1| - 2.8e-15 56.5 0.0 1.4e-14 54.3 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227229|ref|NP_633151.1| - 1.3e-06 28.5 0.0 5e-05 23.3 0.0 2.1 1 1 1 2 2 2 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|21227229|ref|NP_633151.1| - 0.0026 17.7 0.0 0.01 15.8 0.0 1.8 1 1 1 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.6 gi|21227229|ref|NP_633151.1| - 0.0058 17.1 0.0 0.039 14.5 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase family 2 Polysacc_deac_1 PF01522.21 gi|21227230|ref|NP_633152.1| - 0.03 14.2 0.0 0.15 12.0 0.0 2.0 1 1 0 1 1 1 0 Polysaccharide deacetylase DUF354 PF04007.12 gi|21227231|ref|NP_633153.1| - 8.7e-29 100.6 0.0 9.9e-29 100.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|21227231|ref|NP_633153.1| - 0.0016 18.4 0.3 0.0032 17.5 0.3 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|21227231|ref|NP_633153.1| - 0.029 14.4 0.0 0.055 13.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 HTH_psq PF05225.16 gi|21227231|ref|NP_633153.1| - 0.058 13.1 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 helix-turn-helix, Psq domain UDPG_MGDP_dh_N PF03721.14 gi|21227234|ref|NP_633156.1| - 1.6e-56 190.9 0.4 2.3e-56 190.3 0.4 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|21227234|ref|NP_633156.1| - 7.1e-38 128.7 0.3 1.6e-37 127.6 0.1 1.7 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|21227234|ref|NP_633156.1| - 9.7e-31 106.3 0.1 2.6e-30 104.9 0.1 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.17 gi|21227234|ref|NP_633156.1| - 0.00079 20.0 0.3 2.3 8.9 0.0 3.8 3 1 1 4 4 4 2 NADP oxidoreductase coenzyme F420-dependent NAD_binding_11 PF14833.6 gi|21227234|ref|NP_633156.1| - 0.005 17.1 0.1 0.013 15.7 0.1 1.8 1 1 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DpaA_N PF16924.5 gi|21227234|ref|NP_633156.1| - 0.012 15.7 0.1 0.076 13.1 0.0 2.4 3 0 0 3 3 3 0 Dipicolinate synthase subunit A N-terminal domain NAD_binding_2 PF03446.15 gi|21227234|ref|NP_633156.1| - 0.013 15.7 0.1 1.6 8.9 0.0 2.5 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase NTP_transferase PF00483.23 gi|21227235|ref|NP_633157.1| - 1.7e-30 106.4 0.0 2.1e-30 106.1 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|21227235|ref|NP_633157.1| - 7.3e-09 36.2 0.0 1.4e-08 35.3 0.0 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain Smr PF01713.21 gi|21227235|ref|NP_633157.1| - 0.0055 17.0 0.0 0.2 12.0 0.0 2.8 3 0 0 3 3 3 1 Smr domain IspD PF01128.19 gi|21227235|ref|NP_633157.1| - 0.013 15.3 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.26 gi|21227235|ref|NP_633157.1| - 0.013 15.3 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 CTP_transf_3 PF02348.19 gi|21227235|ref|NP_633157.1| - 0.16 11.9 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase Epimerase PF01370.21 gi|21227236|ref|NP_633158.1| - 2.3e-52 177.9 0.0 2.8e-52 177.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|21227236|ref|NP_633158.1| - 7.1e-51 173.6 0.0 1.6e-50 172.4 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|21227236|ref|NP_633158.1| - 1.2e-21 77.0 0.0 1.5e-21 76.6 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|21227236|ref|NP_633158.1| - 4.8e-20 71.9 0.0 7e-19 68.1 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|21227236|ref|NP_633158.1| - 4e-17 62.2 0.0 5.3e-17 61.8 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|21227236|ref|NP_633158.1| - 2.2e-15 56.5 0.1 6.8e-13 48.4 0.1 2.8 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 gi|21227236|ref|NP_633158.1| - 6.1e-11 42.6 0.0 1e-10 41.8 0.0 1.4 1 1 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|21227236|ref|NP_633158.1| - 1e-07 31.6 0.0 2.4e-06 27.1 0.0 2.4 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 gi|21227236|ref|NP_633158.1| - 0.00046 19.8 0.0 0.0082 15.7 0.0 2.3 2 1 1 3 3 3 1 NmrA-like family Sacchrp_dh_NADP PF03435.18 gi|21227236|ref|NP_633158.1| - 0.0045 17.2 0.0 0.008 16.4 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 gi|21227236|ref|NP_633158.1| - 0.025 14.8 0.0 0.052 13.8 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_7 PF13241.6 gi|21227236|ref|NP_633158.1| - 0.061 13.8 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding KR PF08659.10 gi|21227236|ref|NP_633158.1| - 0.098 12.6 0.0 0.24 11.3 0.0 1.7 1 1 0 1 1 1 0 KR domain Polysacc_synt_3 PF13440.6 gi|21227237|ref|NP_633159.1| - 4.5e-22 78.6 19.7 4.5e-22 78.6 19.7 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|21227237|ref|NP_633159.1| - 5.3e-22 78.5 31.3 5.3e-22 78.5 31.3 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|21227237|ref|NP_633159.1| - 2e-17 63.6 22.0 2e-17 63.6 22.0 3.5 3 1 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|21227237|ref|NP_633159.1| - 2.5e-09 36.3 42.1 4.5e-09 35.4 42.1 1.4 1 1 0 1 1 1 1 Lipid II flippase MurJ MatE PF01554.18 gi|21227237|ref|NP_633159.1| - 3.2e-05 23.6 9.6 3.2e-05 23.6 9.6 4.6 2 2 1 4 4 4 2 MatE Disaggr_repeat PF06848.11 gi|21227238|ref|NP_633160.1| - 2.8e-261 857.9 34.4 5.5e-90 299.8 6.5 3.3 3 0 0 3 3 3 3 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|21227238|ref|NP_633160.1| - 2.6e-72 242.7 12.1 2.6e-72 242.7 12.1 3.0 2 0 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.6 gi|21227238|ref|NP_633160.1| - 4.9e-13 49.2 44.6 8.7e-13 48.4 19.8 3.5 2 1 1 3 3 3 2 Right handed beta helix region TGFb_propeptide PF00688.18 gi|21227238|ref|NP_633160.1| - 8.9e-07 28.9 0.0 6.8 6.4 0.0 5.8 6 0 0 6 6 6 2 TGF-beta propeptide Glycos_transf_1 PF00534.20 gi|21227239|ref|NP_633161.1| - 4.1e-28 98.1 0.0 1.6e-27 96.1 0.0 2.1 2 1 1 3 3 3 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227239|ref|NP_633161.1| - 8.1e-28 97.5 0.0 2.4e-27 96.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227239|ref|NP_633161.1| - 1.3e-13 51.3 0.0 2.3e-13 50.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|21227239|ref|NP_633161.1| - 2.4e-10 40.6 0.0 8e-10 39.0 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21227239|ref|NP_633161.1| - 9.5e-08 32.6 0.0 1.3e-07 32.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|21227240|ref|NP_633162.1| - 8.4e-43 145.9 0.0 1.3e-42 145.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227240|ref|NP_633162.1| - 2.5e-34 118.6 0.0 6e-34 117.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227240|ref|NP_633162.1| - 2.4e-18 66.7 0.0 4.5e-18 65.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|21227240|ref|NP_633162.1| - 5e-11 42.8 0.0 9.7e-11 41.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21227240|ref|NP_633162.1| - 1.1e-09 38.9 0.0 1.8e-09 38.2 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|21227240|ref|NP_633162.1| - 0.067 13.2 0.0 1.7 8.7 0.0 2.4 2 0 0 2 2 2 0 Glycosyl transferase 4-like Nudc_N PF14050.6 gi|21227240|ref|NP_633162.1| - 0.14 12.1 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. Glycos_transf_2 PF00535.26 gi|21227241|ref|NP_633163.1| - 4.1e-28 98.3 0.0 5.8e-28 97.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227241|ref|NP_633163.1| - 1e-14 55.0 0.0 2e-14 54.0 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|21227241|ref|NP_633163.1| - 8.4e-13 48.4 0.1 2.1e-12 47.1 0.1 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|21227241|ref|NP_633163.1| - 4.1e-06 26.8 0.1 7e-06 26.1 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.6 gi|21227241|ref|NP_633163.1| - 0.0001 22.7 0.0 0.00026 21.5 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family 2 Anp1 PF03452.14 gi|21227241|ref|NP_633163.1| - 0.0029 17.1 0.0 0.21 11.0 0.0 2.1 1 1 1 2 2 2 1 Anp1 GNT-I PF03071.15 gi|21227241|ref|NP_633163.1| - 0.089 11.5 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 GNT-I family NTP_transf_3 PF12804.7 gi|21227241|ref|NP_633163.1| - 0.13 12.6 0.0 0.27 11.6 0.0 1.5 2 0 0 2 2 2 0 MobA-like NTP transferase domain Glycos_transf_2 PF00535.26 gi|21227242|ref|NP_633164.1| - 5.8e-26 91.3 0.0 8.7e-26 90.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|21227242|ref|NP_633164.1| - 1.7e-05 25.2 0.0 0.00037 21.0 0.0 2.2 1 1 1 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227242|ref|NP_633164.1| - 2e-05 24.6 0.0 3.1e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|21227242|ref|NP_633164.1| - 0.08 12.4 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF373 PF04123.13 gi|21227242|ref|NP_633164.1| - 2 7.8 9.4 0.75 9.2 2.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF373) Glycos_transf_2 PF00535.26 gi|21227243|ref|NP_633165.1| - 6e-34 117.3 0.1 8.5e-34 116.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|21227243|ref|NP_633165.1| - 5e-21 75.4 1.1 7e-21 74.9 1.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|21227243|ref|NP_633165.1| - 8.3e-10 38.9 0.0 1.3e-09 38.3 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 V-set PF07686.17 gi|21227243|ref|NP_633165.1| - 0.056 13.6 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Immunoglobulin V-set domain Glyco_tranf_2_4 PF13704.6 gi|21227243|ref|NP_633165.1| - 0.12 12.9 0.1 0.34 11.5 0.1 1.8 1 1 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.20 gi|21227244|ref|NP_633166.1| - 1.7e-47 161.2 0.0 3.6e-47 160.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227244|ref|NP_633166.1| - 3.9e-36 124.4 0.0 2.2e-35 122.0 0.0 2.1 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227244|ref|NP_633166.1| - 2.3e-29 102.6 0.0 4.1e-29 101.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|21227244|ref|NP_633166.1| - 5.8e-17 62.6 0.0 7.7e-17 62.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|21227244|ref|NP_633166.1| - 2.2e-15 56.8 0.0 4.3e-15 55.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|21227244|ref|NP_633166.1| - 1.8e-09 37.8 0.6 4.9e-09 36.3 0.2 1.9 3 0 0 3 3 3 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.11 gi|21227244|ref|NP_633166.1| - 1.7e-07 31.2 0.0 7.2e-07 29.1 0.0 2.0 1 1 0 1 1 1 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 gi|21227245|ref|NP_633167.1| - 1.3e-32 112.7 0.0 2.9e-32 111.6 0.0 1.6 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227245|ref|NP_633167.1| - 2.8e-29 102.2 0.0 6.8e-29 101.0 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227245|ref|NP_633167.1| - 2.1e-15 57.2 0.0 3e-15 56.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|21227245|ref|NP_633167.1| - 5.1e-12 46.0 0.0 1.2e-11 44.8 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|21227245|ref|NP_633167.1| - 0.00057 19.9 0.1 0.00098 19.2 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.6 gi|21227245|ref|NP_633167.1| - 0.0015 19.0 0.0 0.0031 18.0 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain DUF3107 PF11305.8 gi|21227245|ref|NP_633167.1| - 0.054 13.8 0.0 0.17 12.1 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3107) Disaggr_repeat PF06848.11 gi|21227246|ref|NP_633168.1| - 7.8e-258 846.7 36.4 6.7e-87 289.8 6.6 3.3 3 0 0 3 3 3 3 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|21227246|ref|NP_633168.1| - 6.2e-66 221.9 11.9 6.2e-66 221.9 11.9 3.0 3 0 0 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|21227246|ref|NP_633168.1| - 1.1e-13 51.4 15.4 1.1e-13 51.4 15.4 4.7 4 1 1 5 5 5 2 Right handed beta helix region TGFb_propeptide PF00688.18 gi|21227246|ref|NP_633168.1| - 7.1e-09 35.8 0.0 1.1 8.9 0.0 6.0 6 0 0 6 6 6 3 TGF-beta propeptide DUF5123 PF17161.4 gi|21227246|ref|NP_633168.1| - 1.7e-07 32.3 0.6 1.7e-07 32.3 0.6 4.2 5 0 0 5 5 5 1 Domain of unknown function (DUF5123) DUF295 PF03478.18 gi|21227246|ref|NP_633168.1| - 1.6 8.4 4.5 2 8.0 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF295) Disaggr_assoc PF08480.10 gi|21227247|ref|NP_633169.1| - 1.1e-84 283.1 7.8 1.1e-84 283.1 7.8 2.9 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|21227247|ref|NP_633169.1| - 1.1e-18 67.6 43.8 2.1e-14 53.7 26.6 3.3 1 1 1 2 2 2 2 Right handed beta helix region DUF5123 PF17161.4 gi|21227247|ref|NP_633169.1| - 0.0074 17.4 0.2 0.0074 17.4 0.2 3.5 2 1 1 3 3 3 1 Domain of unknown function (DUF5123) Imm58 PF15581.6 gi|21227248|ref|NP_633170.1| - 0.13 12.4 0.2 0.13 12.4 0.2 3.6 3 1 0 3 3 3 0 Immunity protein 58 Glycos_transf_2 PF00535.26 gi|21227249|ref|NP_633171.1| - 5.8e-26 91.3 0.0 8.6e-26 90.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|21227249|ref|NP_633171.1| - 1.7e-05 25.2 0.0 0.00036 21.0 0.0 2.2 1 1 1 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227249|ref|NP_633171.1| - 1.8e-05 24.8 0.0 3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|21227249|ref|NP_633171.1| - 0.08 12.4 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF373 PF04123.13 gi|21227249|ref|NP_633171.1| - 1.4 8.3 9.7 0.51 9.7 2.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF373) DUF1616 PF07760.11 gi|21227250|ref|NP_633172.1| - 1.3e-88 297.2 0.3 1.5e-88 297.0 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) CopD PF05425.13 gi|21227250|ref|NP_633172.1| - 0.021 15.2 4.7 2.2 8.7 1.8 2.4 1 1 1 2 2 2 0 Copper resistance protein D DUF4131 PF13567.6 gi|21227250|ref|NP_633172.1| - 7.2 6.2 6.6 6.6 6.3 0.0 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4131) CPBP PF02517.16 gi|21227251|ref|NP_633173.1| - 6.9e-17 61.6 8.9 6.9e-17 61.6 8.9 2.7 2 1 0 2 2 2 2 CPBP intramembrane metalloprotease Vma12 PF11712.8 gi|21227251|ref|NP_633173.1| - 2 8.5 4.2 3 7.9 0.0 3.0 3 1 1 4 4 4 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF3675 PF12428.8 gi|21227252|ref|NP_633174.1| - 0.043 14.4 1.3 0.048 14.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) Hexapep PF00132.24 gi|21227253|ref|NP_633175.1| - 1.3e-31 107.1 24.5 4.9e-08 32.4 2.2 5.3 4 1 0 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21227253|ref|NP_633175.1| - 5.2e-14 51.7 25.9 3.4e-06 26.7 6.3 5.3 5 0 0 5 5 5 4 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.13 gi|21227253|ref|NP_633175.1| - 0.49 10.7 6.6 0.32 11.3 3.0 2.4 2 1 0 2 2 2 0 Polymer-forming cytoskeletal DegT_DnrJ_EryC1 PF01041.17 gi|21227254|ref|NP_633176.1| - 5.7e-138 460.1 0.1 6.4e-138 460.0 0.1 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|21227254|ref|NP_633176.1| - 1.4e-08 34.4 0.4 5e-08 32.6 0.4 1.8 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|21227254|ref|NP_633176.1| - 1.7e-06 26.9 0.1 4.8e-06 25.4 0.1 1.8 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|21227254|ref|NP_633176.1| - 1.3e-05 24.4 0.1 0.0011 18.1 0.1 2.1 2 0 0 2 2 2 2 Aminotransferase class-V GFO_IDH_MocA PF01408.22 gi|21227255|ref|NP_633177.1| - 9.8e-32 110.3 1.3 1.7e-31 109.6 1.3 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|21227255|ref|NP_633177.1| - 3.2e-05 23.9 0.0 9.6e-05 22.4 0.0 1.8 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_2 PF03446.15 gi|21227255|ref|NP_633177.1| - 4e-05 23.8 1.0 7.2e-05 23.0 1.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|21227255|ref|NP_633177.1| - 0.0016 19.0 1.2 0.0038 17.8 0.4 2.0 1 1 1 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.24 gi|21227255|ref|NP_633177.1| - 0.003 18.0 0.7 0.0058 17.1 0.5 1.5 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain OCD_Mu_crystall PF02423.15 gi|21227255|ref|NP_633177.1| - 0.0037 16.2 1.1 0.0078 15.2 1.1 1.5 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family DapB_N PF01113.20 gi|21227255|ref|NP_633177.1| - 0.0038 17.4 3.1 0.11 12.6 3.1 2.4 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 2-Hacid_dh_C PF02826.19 gi|21227255|ref|NP_633177.1| - 0.0058 16.0 0.5 0.013 14.9 0.1 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|21227255|ref|NP_633177.1| - 0.01 15.9 1.2 0.19 11.8 0.2 2.5 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_3 PF03447.16 gi|21227255|ref|NP_633177.1| - 0.022 15.4 1.4 0.042 14.5 1.4 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain CoA_binding PF02629.19 gi|21227255|ref|NP_633177.1| - 0.034 14.8 0.8 0.093 13.4 0.8 1.8 1 0 0 1 1 1 0 CoA binding domain IlvN PF07991.12 gi|21227255|ref|NP_633177.1| - 0.049 13.2 1.0 0.12 11.9 1.0 1.7 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain UDPG_MGDP_dh_N PF03721.14 gi|21227256|ref|NP_633178.1| - 3.3e-37 127.9 0.0 5.3e-37 127.2 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|21227256|ref|NP_633178.1| - 2.1e-21 75.9 0.0 7.9e-20 70.9 0.0 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|21227256|ref|NP_633178.1| - 2.5e-20 72.9 0.1 7.1e-20 71.4 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 2-Hacid_dh_C PF02826.19 gi|21227256|ref|NP_633178.1| - 0.04 13.3 0.1 9.7 5.5 0.0 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 gi|21227256|ref|NP_633178.1| - 0.043 13.1 1.0 3 7.1 0.1 2.8 3 1 0 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Polysacc_deac_1 PF01522.21 gi|21227257|ref|NP_633179.1| - 0.00074 19.4 0.0 0.0029 17.5 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 gi|21227257|ref|NP_633179.1| - 0.018 14.3 0.5 0.046 12.9 0.1 1.7 2 0 0 2 2 2 0 Glycosyl hydrolase family 57 Polysacc_synt_3 PF13440.6 gi|21227258|ref|NP_633180.1| - 9.5e-20 71.0 8.3 9.5e-20 71.0 8.3 2.0 2 2 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|21227258|ref|NP_633180.1| - 3.3e-09 36.5 10.7 3.3e-09 36.5 10.7 3.7 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein Y_Y_Y PF07495.13 gi|21227259|ref|NP_633181.1| - 0.00042 20.2 1.4 0.024 14.6 0.0 3.0 3 0 0 3 3 3 1 Y_Y_Y domain DUF1842 PF08896.10 gi|21227259|ref|NP_633181.1| - 0.016 15.4 0.0 0.079 13.2 0.1 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF1842) TcfC PF16967.5 gi|21227259|ref|NP_633181.1| - 0.018 14.5 0.1 0.089 12.3 0.0 2.1 1 1 1 2 2 2 0 E-set like domain Ribosomal_L31 PF01197.18 gi|21227260|ref|NP_633182.1| - 0.021 15.1 0.2 0.059 13.6 0.0 1.8 2 0 0 2 2 2 0 Ribosomal protein L31 Big_3_5 PF16640.5 gi|21227260|ref|NP_633182.1| - 0.35 11.1 3.0 0.4 10.9 0.2 2.6 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) Acylphosphatase PF00708.18 gi|21227261|ref|NP_633183.1| - 1.3e-22 80.0 0.1 2.2e-22 79.3 0.1 1.3 1 0 0 1 1 1 1 Acylphosphatase HSBP1 PF06825.12 gi|21227261|ref|NP_633183.1| - 0.0002 21.2 0.9 1.1 9.2 0.1 4.3 1 1 2 3 3 3 2 Heat shock factor binding protein 1 DUF16 PF01519.16 gi|21227261|ref|NP_633183.1| - 0.035 14.6 0.0 0.62 10.6 0.0 2.6 1 1 0 1 1 1 0 Protein of unknown function DUF16 Collagen_mid PF15984.5 gi|21227261|ref|NP_633183.1| - 0.044 13.5 0.0 0.076 12.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial collagen, middle region DUF2884 PF11101.8 gi|21227261|ref|NP_633183.1| - 0.095 12.2 0.1 2.5 7.6 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2884) Fer4_24 PF18109.1 gi|21227261|ref|NP_633183.1| - 0.14 12.4 0.6 24 5.3 0.0 3.6 1 1 1 3 3 3 0 Ferredoxin I 4Fe-4S cluster domain Polbeta PF18765.1 gi|21227262|ref|NP_633184.1| - 3.9e-22 78.2 0.1 5.8e-22 77.6 0.1 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|21227262|ref|NP_633184.1| - 2.2e-09 37.5 0.3 4.5e-09 36.5 0.3 1.7 1 1 0 1 1 1 1 Nucleotidyltransferase domain DUF294 PF03445.13 gi|21227262|ref|NP_633184.1| - 0.044 13.6 0.0 0.059 13.2 0.0 1.3 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 INCENP_N PF12178.8 gi|21227262|ref|NP_633184.1| - 0.094 12.7 0.1 0.43 10.6 0.0 1.9 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal DUF86 PF01934.17 gi|21227263|ref|NP_633185.1| - 4.5e-25 87.8 0.1 5.2e-25 87.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF86 Epimerase PF01370.21 gi|21227264|ref|NP_633186.1| - 1.8e-63 214.2 0.0 5.1e-63 212.7 0.1 1.6 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|21227264|ref|NP_633186.1| - 2.8e-59 201.2 0.0 3.4e-59 200.9 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|21227264|ref|NP_633186.1| - 1.3e-24 86.7 0.0 1.7e-24 86.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|21227264|ref|NP_633186.1| - 1.2e-18 67.3 0.0 5.8e-18 65.0 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|21227264|ref|NP_633186.1| - 1.6e-15 57.0 0.0 2.2e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|21227264|ref|NP_633186.1| - 4.2e-08 32.7 0.1 0.0003 20.0 0.0 2.6 2 1 0 2 2 2 2 Male sterility protein adh_short PF00106.25 gi|21227264|ref|NP_633186.1| - 1.6e-07 31.0 0.4 5.2e-07 29.3 0.4 1.9 1 1 0 1 1 1 1 short chain dehydrogenase NAD_binding_10 PF13460.6 gi|21227264|ref|NP_633186.1| - 2.3e-07 30.9 0.0 4.7e-07 29.9 0.0 1.5 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|21227264|ref|NP_633186.1| - 7.5e-06 25.7 0.0 1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family adh_short_C2 PF13561.6 gi|21227264|ref|NP_633186.1| - 7.4e-05 22.4 0.0 0.00013 21.6 0.0 1.4 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|21227264|ref|NP_633186.1| - 0.00089 19.2 0.1 0.002 18.1 0.1 1.6 1 1 0 1 1 1 1 KR domain ApbA PF02558.16 gi|21227264|ref|NP_633186.1| - 0.0014 18.3 0.0 0.0021 17.7 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|21227264|ref|NP_633186.1| - 0.014 16.0 0.0 0.026 15.1 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|21227264|ref|NP_633186.1| - 0.016 15.1 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|21227264|ref|NP_633186.1| - 0.018 14.6 0.6 0.047 13.3 0.3 1.8 2 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|21227264|ref|NP_633186.1| - 0.02 15.2 0.1 0.046 14.0 0.1 1.7 1 1 0 1 1 1 0 TrkA-N domain DUF1188 PF06690.11 gi|21227264|ref|NP_633186.1| - 0.037 13.6 0.4 0.05 13.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Sacchrp_dh_NADP PF03435.18 gi|21227264|ref|NP_633186.1| - 0.07 13.4 0.2 0.16 12.2 0.1 1.7 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox PF00070.27 gi|21227264|ref|NP_633186.1| - 0.11 13.0 0.0 0.36 11.4 0.0 2.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DapB_N PF01113.20 gi|21227264|ref|NP_633186.1| - 0.13 12.4 0.2 0.29 11.3 0.1 1.6 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus NAD_binding_8 PF13450.6 gi|21227264|ref|NP_633186.1| - 0.13 12.5 0.0 0.31 11.3 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Polbeta PF18765.1 gi|21227265|ref|NP_633187.1| - 1.6e-12 47.3 0.0 1.9e-12 47.1 0.0 1.1 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|21227265|ref|NP_633187.1| - 2e-12 47.2 0.1 2.4e-12 47.0 0.1 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.6 gi|21227265|ref|NP_633187.1| - 0.044 14.0 0.0 0.052 13.7 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase beta palm DUF86 PF01934.17 gi|21227266|ref|NP_633188.1| - 6.8e-26 90.5 0.2 8e-26 90.2 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Glycos_transf_2 PF00535.26 gi|21227267|ref|NP_633189.1| - 5.6e-19 68.6 0.1 8.7e-19 67.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227267|ref|NP_633189.1| - 4.7e-06 26.6 0.1 6.3e-06 26.2 0.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|21227267|ref|NP_633189.1| - 0.023 15.2 0.0 0.056 14.0 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|21227267|ref|NP_633189.1| - 0.081 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 TMEM70 PF06979.12 gi|21227267|ref|NP_633189.1| - 0.34 11.3 1.5 16 5.9 0.8 2.3 2 0 0 2 2 2 0 Assembly, mitochondrial proton-transport ATP synth complex dTDP_sugar_isom PF00908.17 gi|21227268|ref|NP_633190.1| - 1.8e-71 239.3 0.0 2e-71 239.1 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase GDP_Man_Dehyd PF16363.5 gi|21227269|ref|NP_633191.1| - 1.2e-82 278.0 0.0 1.4e-82 277.8 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|21227269|ref|NP_633191.1| - 1.4e-64 217.9 0.0 1.8e-64 217.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|21227269|ref|NP_633191.1| - 3.5e-24 85.3 0.0 4.7e-24 84.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|21227269|ref|NP_633191.1| - 2.9e-23 82.4 0.0 4.9e-22 78.4 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|21227269|ref|NP_633191.1| - 6.8e-16 58.2 0.0 3.4e-14 52.6 0.1 2.4 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 gi|21227269|ref|NP_633191.1| - 4.4e-15 55.5 0.0 7.2e-15 54.8 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|21227269|ref|NP_633191.1| - 3.1e-08 33.7 0.0 4.2e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|21227269|ref|NP_633191.1| - 0.0012 18.4 0.0 0.0018 17.9 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|21227269|ref|NP_633191.1| - 0.055 12.9 0.0 2.5 7.5 0.0 2.2 2 0 0 2 2 2 0 short chain dehydrogenase KR PF08659.10 gi|21227269|ref|NP_633191.1| - 0.21 11.5 0.0 0.32 10.9 0.0 1.4 1 0 0 1 1 1 0 KR domain RmlD_sub_bind PF04321.17 gi|21227270|ref|NP_633192.1| - 1.3e-88 296.8 0.0 1.7e-88 296.5 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|21227270|ref|NP_633192.1| - 2.8e-18 66.3 0.0 6.6e-18 65.0 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|21227270|ref|NP_633192.1| - 2e-12 47.2 0.0 2.7e-12 46.7 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|21227270|ref|NP_633192.1| - 1.7e-10 40.5 0.5 3e-09 36.4 0.0 2.9 1 1 1 3 3 3 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|21227270|ref|NP_633192.1| - 1.4e-05 24.3 0.3 8.6e-05 21.7 0.1 2.0 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|21227270|ref|NP_633192.1| - 1.6e-05 24.2 0.0 5.3e-05 22.5 0.0 1.8 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 gi|21227270|ref|NP_633192.1| - 0.095 12.6 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding NTP_transferase PF00483.23 gi|21227271|ref|NP_633193.1| - 2e-23 83.3 0.0 2.2e-23 83.2 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|21227271|ref|NP_633193.1| - 7.5e-10 39.4 0.0 8e-10 39.3 0.0 1.0 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|21227271|ref|NP_633193.1| - 0.028 14.4 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 Cytidylyltransferase IspD PF01128.19 gi|21227271|ref|NP_633193.1| - 0.043 13.5 0.0 0.044 13.5 0.0 1.0 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Epimerase_2 PF02350.19 gi|21227272|ref|NP_633194.1| - 1.7e-113 379.0 0.0 1.9e-113 378.9 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_4 PF13439.6 gi|21227272|ref|NP_633194.1| - 0.0008 19.4 0.0 0.0017 18.4 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|21227272|ref|NP_633194.1| - 0.01 15.9 0.0 0.015 15.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.6 gi|21227272|ref|NP_633194.1| - 0.036 14.5 0.0 0.098 13.1 0.0 1.7 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain MGDG_synth PF06925.11 gi|21227272|ref|NP_633194.1| - 0.17 12.0 0.0 1.4 9.0 0.0 2.2 2 0 0 2 2 2 0 Monogalactosyldiacylglycerol (MGDG) synthase Acyl_transf_3 PF01757.22 gi|21227273|ref|NP_633195.1| - 2.6e-27 95.8 43.6 3.1e-27 95.6 43.6 1.0 1 0 0 1 1 1 1 Acyltransferase family ETRAMP PF09716.10 gi|21227273|ref|NP_633195.1| - 1.1 9.4 0.0 1.1 9.4 0.0 3.1 3 0 0 3 3 3 0 Malarial early transcribed membrane protein (ETRAMP) UDPG_MGDP_dh_N PF03721.14 gi|21227274|ref|NP_633196.1| - 1.5e-56 191.0 0.1 2.8e-56 190.0 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|21227274|ref|NP_633196.1| - 1.3e-26 92.6 0.0 2.9e-26 91.5 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|21227274|ref|NP_633196.1| - 1e-23 83.7 0.1 4e-23 81.8 0.0 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|21227274|ref|NP_633196.1| - 2.8e-08 34.1 0.0 7.5e-08 32.7 0.0 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|21227274|ref|NP_633196.1| - 0.00038 20.5 0.0 0.0035 17.3 0.0 2.7 2 1 1 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.19 gi|21227274|ref|NP_633196.1| - 0.00058 19.3 0.1 0.49 9.7 0.0 2.9 3 0 0 3 3 3 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|21227274|ref|NP_633196.1| - 0.00071 19.5 0.0 0.0015 18.4 0.0 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|21227274|ref|NP_633196.1| - 0.0051 17.1 0.0 0.019 15.2 0.0 2.0 2 0 0 2 2 2 1 TrkA-N domain ApbA PF02558.16 gi|21227274|ref|NP_633196.1| - 0.0063 16.2 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|21227274|ref|NP_633196.1| - 0.028 15.0 0.0 0.17 12.5 0.0 2.4 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Pyr_redox PF00070.27 gi|21227274|ref|NP_633196.1| - 0.043 14.4 0.9 0.41 11.2 0.0 3.1 4 1 0 4 4 4 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|21227274|ref|NP_633196.1| - 0.051 12.8 0.0 0.1 11.8 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|21227274|ref|NP_633196.1| - 0.11 11.7 0.0 0.2 11.0 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DDE_Tnp_IS66 PF03050.14 gi|21227275|ref|NP_633197.1| - 0.051 13.0 0.0 0.064 12.7 0.0 1.1 1 0 0 1 1 1 0 Transposase IS66 family DUF4096 PF13340.6 gi|21227276|ref|NP_633198.1| - 0.001 19.2 0.0 0.0012 19.1 0.0 1.2 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) Polysacc_synt_3 PF13440.6 gi|21227277|ref|NP_633199.1| - 5.2e-30 104.7 21.0 5.2e-30 104.7 21.0 2.3 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|21227277|ref|NP_633199.1| - 2.2e-29 102.7 27.4 2.2e-29 102.7 27.4 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|21227277|ref|NP_633199.1| - 2.7e-18 66.4 46.7 1.6e-14 54.2 26.3 4.0 4 2 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|21227277|ref|NP_633199.1| - 1.3e-08 33.9 42.8 1.3e-08 33.9 42.8 1.9 1 1 0 1 1 1 1 Lipid II flippase MurJ DUF2206 PF09971.9 gi|21227278|ref|NP_633200.1| - 6.6e-25 87.6 32.2 1.3e-24 86.7 32.2 1.4 1 0 0 1 1 1 1 Predicted membrane protein (DUF2206) Glycos_transf_1 PF00534.20 gi|21227279|ref|NP_633201.1| - 7e-16 58.2 0.0 1.3e-15 57.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227279|ref|NP_633201.1| - 2e-09 38.0 0.0 3.2e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227279|ref|NP_633201.1| - 4.2e-09 36.6 0.0 6.7e-09 36.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|21227279|ref|NP_633201.1| - 3.3e-06 27.4 0.0 5.9e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|21227279|ref|NP_633201.1| - 3.5e-05 23.8 0.3 7.3e-05 22.8 0.3 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.6 gi|21227279|ref|NP_633201.1| - 0.035 14.5 0.0 0.052 14.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain DUF3949 PF13133.6 gi|21227279|ref|NP_633201.1| - 0.047 14.1 0.1 0.13 12.7 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3949) Glycos_transf_1 PF00534.20 gi|21227280|ref|NP_633202.1| - 9e-23 80.7 0.0 2.3e-22 79.3 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227280|ref|NP_633202.1| - 3.6e-18 66.3 0.0 6.1e-18 65.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227280|ref|NP_633202.1| - 1.7e-14 54.2 0.0 3.1e-14 53.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|21227280|ref|NP_633202.1| - 1.5e-05 25.5 0.0 2.3e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|21227280|ref|NP_633202.1| - 5.4e-05 23.2 0.2 0.0018 18.3 0.2 2.8 3 0 0 3 3 3 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|21227280|ref|NP_633202.1| - 0.0001 22.6 0.0 0.00017 21.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227281|ref|NP_633203.1| - 7.8e-26 91.1 0.0 1.4e-24 87.0 0.0 2.0 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|21227281|ref|NP_633203.1| - 2.2e-24 85.9 0.0 3.8e-24 85.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227281|ref|NP_633203.1| - 3.1e-21 76.2 0.0 4.8e-21 75.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21227281|ref|NP_633203.1| - 1.7e-16 61.0 0.0 2.4e-16 60.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|21227281|ref|NP_633203.1| - 9.5e-05 22.2 0.1 0.021 14.5 0.1 2.2 1 1 0 1 1 1 1 Starch synthase catalytic domain Syntaxin-18_N PF10496.9 gi|21227281|ref|NP_633203.1| - 0.00065 19.9 0.2 0.002 18.4 0.1 1.8 2 0 0 2 2 2 1 SNARE-complex protein Syntaxin-18 N-terminus Glyco_transf_41 PF13844.6 gi|21227281|ref|NP_633203.1| - 0.00065 18.3 0.0 0.00087 17.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 41 Glyco_trans_4_2 PF13477.6 gi|21227281|ref|NP_633203.1| - 0.0011 19.1 0.6 0.0071 16.4 0.6 2.2 1 1 0 1 1 1 1 Glycosyl transferase 4-like GFO_IDH_MocA PF01408.22 gi|21227282|ref|NP_633204.1| - 3.6e-22 79.4 0.1 1.9e-21 77.1 0.0 2.2 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold ADH_zinc_N PF00107.26 gi|21227282|ref|NP_633204.1| - 7.5e-19 68.0 0.0 5.2e-18 65.3 0.0 2.3 2 0 0 2 2 2 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|21227282|ref|NP_633204.1| - 1.8e-05 24.4 0.6 3.4e-05 23.5 0.1 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFO_IDH_MocA_C PF02894.17 gi|21227282|ref|NP_633204.1| - 0.0014 18.6 0.0 0.0032 17.5 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Glu_dehyd_C PF16912.5 gi|21227282|ref|NP_633204.1| - 0.002 17.7 0.0 0.0059 16.1 0.0 1.8 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus 2-Hacid_dh_C PF02826.19 gi|21227282|ref|NP_633204.1| - 0.0044 16.4 0.1 0.0088 15.4 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|21227282|ref|NP_633204.1| - 0.0044 16.3 0.7 0.0044 16.3 0.7 1.8 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|21227282|ref|NP_633204.1| - 0.0047 17.2 0.1 0.012 15.9 0.1 1.7 1 0 0 1 1 1 1 TrkA-N domain BCDHK_Adom3 PF10436.9 gi|21227282|ref|NP_633204.1| - 0.11 12.3 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase ADH_zinc_N_2 PF13602.6 gi|21227282|ref|NP_633204.1| - 0.16 13.1 0.0 1.3 10.1 0.0 2.6 2 1 0 2 2 2 0 Zinc-binding dehydrogenase 3HCDH_N PF02737.18 gi|21227282|ref|NP_633204.1| - 0.44 10.4 3.6 0.44 10.4 0.1 2.7 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ADH_N PF08240.12 gi|21227282|ref|NP_633204.1| - 1.2 9.1 4.9 0.97 9.3 0.1 2.7 2 1 0 3 3 3 0 Alcohol dehydrogenase GroES-like domain Pec_lyase PF09492.10 gi|21227283|ref|NP_633205.1| - 0.00058 19.3 0.5 2.4 7.4 0.1 2.9 1 1 1 3 3 3 2 Pectic acid lyase Glyco_hydro_88 PF07470.13 gi|21227283|ref|NP_633205.1| - 0.0049 16.0 0.0 0.0099 15.0 0.0 1.4 2 0 0 2 2 2 1 Glycosyl Hydrolase Family 88 Glycos_transf_1 PF00534.20 gi|21227284|ref|NP_633206.1| - 7.6e-20 71.1 0.0 1.1e-19 70.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227284|ref|NP_633206.1| - 3.6e-19 69.5 0.0 6.3e-19 68.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227284|ref|NP_633206.1| - 7.1e-14 52.2 0.0 1.1e-13 51.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|21227284|ref|NP_633206.1| - 3.6e-10 40.1 0.0 7.4e-10 39.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21227284|ref|NP_633206.1| - 9.6e-08 32.6 0.0 1.2e-07 32.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|21227284|ref|NP_633206.1| - 0.041 13.9 0.1 0.12 12.4 0.1 1.8 1 1 0 1 1 1 0 Glycosyl transferase 4-like Glycos_transf_2 PF00535.26 gi|21227285|ref|NP_633207.1| - 1.8e-23 83.2 0.0 2.7e-23 82.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227285|ref|NP_633207.1| - 5.8e-10 39.4 0.0 7.9e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|21227285|ref|NP_633207.1| - 0.0044 17.5 0.0 0.0082 16.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 NTP_transf_3 PF12804.7 gi|21227285|ref|NP_633207.1| - 0.062 13.7 0.1 0.095 13.1 0.1 1.3 1 0 0 1 1 1 0 MobA-like NTP transferase domain Glycos_transf_2 PF00535.26 gi|21227286|ref|NP_633208.1| - 6.9e-18 65.0 0.0 1e-17 64.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227286|ref|NP_633208.1| - 2.4e-05 24.3 0.0 3.1e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|21227286|ref|NP_633208.1| - 0.038 14.5 0.0 0.071 13.6 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF1616 PF07760.11 gi|21227287|ref|NP_633209.1| - 1.2e-108 362.9 0.1 1.4e-108 362.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) DUF872 PF05915.12 gi|21227287|ref|NP_633209.1| - 0.17 12.0 2.4 4.3 7.5 0.5 2.3 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) CPBP PF02517.16 gi|21227288|ref|NP_633210.1| - 8.9e-17 61.3 5.7 8.9e-17 61.3 5.7 3.1 2 1 1 3 3 3 1 CPBP intramembrane metalloprotease DUF3236 PF11576.8 gi|21227288|ref|NP_633210.1| - 0.008 15.9 0.7 0.013 15.2 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3236) OCIA PF07051.11 gi|21227288|ref|NP_633210.1| - 0.097 12.7 2.2 0.49 10.5 0.1 2.7 2 1 1 3 3 3 0 Ovarian carcinoma immunoreactive antigen (OCIA) DUF2207 PF09972.9 gi|21227288|ref|NP_633210.1| - 5.7 5.6 6.1 11 4.7 5.9 1.8 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) AglB_L1 PF18079.1 gi|21227291|ref|NP_633213.1| - 4.7e-05 23.6 0.9 0.014 15.6 0.2 2.5 1 1 1 2 2 2 2 Archaeal glycosylation protein B long peripheral domain Y_Y_Y PF07495.13 gi|21227291|ref|NP_633213.1| - 0.0051 16.8 1.1 0.11 12.5 0.0 2.8 3 1 0 3 3 3 1 Y_Y_Y domain DUF2271 PF10029.9 gi|21227291|ref|NP_633213.1| - 0.019 14.6 0.0 0.054 13.1 0.0 1.9 2 0 0 2 2 2 0 Predicted periplasmic protein (DUF2271) FlgD_ig PF13860.6 gi|21227291|ref|NP_633213.1| - 0.083 12.8 0.6 3.1 7.7 0.1 2.9 2 1 1 3 3 3 0 FlgD Ig-like domain Polysacc_synt_2 PF02719.15 gi|21227293|ref|NP_633215.1| - 0.024 13.8 0.0 0.024 13.8 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF4277 PF14104.6 gi|21227294|ref|NP_633216.1| - 4.8e-44 149.2 0.0 9.4e-44 148.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|21227294|ref|NP_633216.1| - 3e-18 66.3 3.5 2.6e-17 63.2 3.5 2.0 1 1 0 1 1 1 1 Transposase DDE domain DUF2887 PF11103.8 gi|21227294|ref|NP_633216.1| - 0.02 14.9 2.6 0.049 13.6 2.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2887) Ntox15 PF15604.6 gi|21227294|ref|NP_633216.1| - 3.2 7.9 5.9 1.2 9.2 2.8 1.9 1 1 1 2 2 2 0 Novel toxin 15 Epimerase PF01370.21 gi|21227295|ref|NP_633217.1| - 1e-63 215.0 0.0 1.2e-63 214.8 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|21227295|ref|NP_633217.1| - 1.3e-53 182.6 0.0 1.5e-53 182.3 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|21227295|ref|NP_633217.1| - 4e-28 98.2 0.0 5.2e-28 97.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|21227295|ref|NP_633217.1| - 1.3e-18 67.2 0.0 9.4e-18 64.4 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|21227295|ref|NP_633217.1| - 2e-15 57.2 0.0 6.5e-15 55.5 0.0 1.7 1 1 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|21227295|ref|NP_633217.1| - 3.3e-14 52.7 0.0 3.5e-14 52.6 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|21227295|ref|NP_633217.1| - 2.3e-09 36.8 0.0 4.7e-07 29.2 0.0 2.6 1 1 0 1 1 1 1 Male sterility protein NmrA PF05368.13 gi|21227295|ref|NP_633217.1| - 4e-09 36.4 0.0 7.4e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|21227295|ref|NP_633217.1| - 1.7e-07 30.9 0.0 2.8e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|21227295|ref|NP_633217.1| - 8.7e-05 22.5 0.3 0.003 17.5 0.3 2.7 1 1 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 gi|21227295|ref|NP_633217.1| - 0.0008 19.3 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain adh_short_C2 PF13561.6 gi|21227295|ref|NP_633217.1| - 0.008 15.8 0.0 0.015 14.9 0.0 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase TrkA_N PF02254.18 gi|21227295|ref|NP_633217.1| - 0.014 15.6 0.0 0.026 14.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Sacchrp_dh_NADP PF03435.18 gi|21227295|ref|NP_633217.1| - 0.022 15.0 0.0 0.49 10.7 0.0 2.2 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain NAD_Gly3P_dh_N PF01210.23 gi|21227295|ref|NP_633217.1| - 0.076 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|21227295|ref|NP_633217.1| - 0.12 13.0 0.1 0.22 12.1 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF1616 PF07760.11 gi|21227296|ref|NP_633218.1| - 7.7e-95 317.6 0.1 9.2e-95 317.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) CPBP PF02517.16 gi|21227297|ref|NP_633219.1| - 5.2e-17 62.0 8.0 5.2e-17 62.0 8.0 2.3 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease Y_Y_Y PF07495.13 gi|21227298|ref|NP_633220.1| - 0.0096 15.9 0.1 0.044 13.8 0.0 2.2 2 0 0 2 2 2 1 Y_Y_Y domain AglB_L1 PF18079.1 gi|21227298|ref|NP_633220.1| - 0.035 14.4 0.2 0.16 12.3 0.1 2.1 2 1 0 2 2 2 0 Archaeal glycosylation protein B long peripheral domain DUF2271 PF10029.9 gi|21227298|ref|NP_633220.1| - 0.045 13.4 0.1 0.098 12.3 0.1 1.6 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) bMG6 PF17962.1 gi|21227298|ref|NP_633220.1| - 0.046 13.9 0.2 0.14 12.3 0.1 1.8 2 0 0 2 2 2 0 Bacterial macroglobulin domain 6 Filamin PF00630.19 gi|21227298|ref|NP_633220.1| - 0.061 14.1 0.4 0.75 10.7 0.0 2.4 1 1 2 3 3 3 0 Filamin/ABP280 repeat SdrD_B PF17210.3 gi|21227298|ref|NP_633220.1| - 0.11 12.8 0.2 0.39 11.0 0.2 1.9 1 1 1 2 2 2 0 SdrD B-like domain DUF1624 PF07786.12 gi|21227299|ref|NP_633221.1| - 5.5e-78 261.6 9.4 6.3e-78 261.4 9.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.22 gi|21227299|ref|NP_633221.1| - 1.5e-09 37.4 25.5 1.3e-05 24.4 12.0 2.4 1 1 1 2 2 2 2 Acyltransferase family OpgC_C PF10129.9 gi|21227299|ref|NP_633221.1| - 0.00063 18.7 2.6 0.00063 18.7 2.6 2.5 1 1 2 3 3 3 2 OpgC protein MULE PF10551.9 gi|21227300|ref|NP_633222.1| - 0.00043 20.7 0.0 0.00093 19.6 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|21227300|ref|NP_633222.1| - 0.00065 19.3 0.1 0.0077 15.7 0.1 2.0 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.18 gi|21227300|ref|NP_633222.1| - 0.037 13.8 1.2 0.071 12.8 0.6 1.8 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family zf-3CxxC_2 PF17180.4 gi|21227300|ref|NP_633222.1| - 0.12 13.2 0.6 0.53 11.1 0.6 2.1 1 0 0 1 1 1 0 Zinc-binding domain Sgf11 PF08209.11 gi|21227300|ref|NP_633222.1| - 0.88 9.2 3.3 19 4.9 0.7 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-C2HC_2 PF13913.6 gi|21227300|ref|NP_633222.1| - 1.3 9.0 3.4 0.47 10.4 0.2 2.0 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Ribosomal_S17e PF00833.18 gi|21227302|ref|NP_633224.1| - 3.7e-15 55.9 2.5 4.2e-15 55.7 2.5 1.0 1 0 0 1 1 1 1 Ribosomal S17 DHDPS PF00701.22 gi|21227303|ref|NP_633225.1| - 6.5e-98 327.0 0.0 7.2e-98 326.8 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family ThiG PF05690.14 gi|21227303|ref|NP_633225.1| - 0.035 13.4 0.1 0.062 12.6 0.1 1.4 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG THF_DHG_CYH PF00763.23 gi|21227303|ref|NP_633225.1| - 0.14 12.4 0.0 18 5.7 0.0 3.0 2 1 1 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DapB_C PF05173.14 gi|21227304|ref|NP_633226.1| - 9.7e-47 158.0 0.1 1.4e-46 157.5 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 gi|21227304|ref|NP_633226.1| - 6.3e-33 113.5 1.9 9.8e-33 112.9 1.9 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 3Beta_HSD PF01073.19 gi|21227304|ref|NP_633226.1| - 0.0085 15.1 0.8 0.012 14.7 0.8 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GFO_IDH_MocA PF01408.22 gi|21227304|ref|NP_633226.1| - 0.077 13.8 0.3 2.4 9.0 0.1 2.3 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold OppC_N PF12911.7 gi|21227305|ref|NP_633227.1| - 0.043 13.8 0.5 0.063 13.3 0.5 1.3 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C HTH_29 PF13551.6 gi|21227306|ref|NP_633228.1| - 0.01 15.8 0.0 0.017 15.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix HTH_1 PF00126.27 gi|21227306|ref|NP_633228.1| - 0.052 13.5 0.2 0.085 12.8 0.2 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family NADH-G_4Fe-4S_3 PF10588.9 gi|21227306|ref|NP_633228.1| - 0.055 13.0 0.0 0.15 11.7 0.0 1.7 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HTH_23 PF13384.6 gi|21227306|ref|NP_633228.1| - 0.07 13.0 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_Tnp_4 PF13613.6 gi|21227306|ref|NP_633228.1| - 0.072 12.8 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_7 PF02796.15 gi|21227306|ref|NP_633228.1| - 0.12 12.5 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF1673 PF07895.11 gi|21227307|ref|NP_633229.1| - 2.5e-60 204.1 10.4 2.8e-60 203.9 10.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) Phage_holin_2_3 PF16080.5 gi|21227307|ref|NP_633229.1| - 0.11 12.3 3.6 1.2 9.0 0.4 2.6 2 0 0 2 2 2 0 Bacteriophage holin family HP1 DUF2061 PF09834.9 gi|21227307|ref|NP_633229.1| - 0.15 12.6 11.1 1.2 9.7 1.6 2.5 1 1 1 2 2 2 0 Predicted membrane protein (DUF2061) DUF1673 PF07895.11 gi|21227308|ref|NP_633230.1| - 1e-52 179.1 8.9 4.5e-52 177.1 8.9 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) DUF5373 PF17343.2 gi|21227308|ref|NP_633230.1| - 0.4 10.5 7.7 0.67 9.8 7.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5373) DUF1673 PF07895.11 gi|21227309|ref|NP_633231.1| - 1.6e-43 149.1 6.4 4.4e-43 147.6 6.4 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) UbiA PF01040.18 gi|21227309|ref|NP_633231.1| - 0.0062 15.9 1.7 0.0085 15.4 1.7 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF872 PF05915.12 gi|21227309|ref|NP_633231.1| - 0.0074 16.4 0.8 0.013 15.7 0.8 1.4 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) OppC_N PF12911.7 gi|21227309|ref|NP_633231.1| - 0.018 15.0 6.0 0.07 13.1 6.0 2.0 1 1 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C DUF2678 PF10856.8 gi|21227309|ref|NP_633231.1| - 0.025 14.5 0.3 0.039 13.9 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) DUF3488 PF11992.8 gi|21227309|ref|NP_633231.1| - 0.084 11.8 2.3 0.11 11.4 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF2070 PF09843.9 gi|21227309|ref|NP_633231.1| - 0.11 10.8 1.0 0.14 10.5 1.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3899 PF13038.6 gi|21227309|ref|NP_633231.1| - 2.1 8.9 7.0 2.4 8.7 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF3899) DUF1673 PF07895.11 gi|21227310|ref|NP_633232.1| - 2.4e-37 128.9 3.6 3.6e-37 128.3 3.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) NMN_transporter PF04973.12 gi|21227310|ref|NP_633232.1| - 0.027 14.4 7.5 0.035 14.1 7.5 1.1 1 0 0 1 1 1 0 Nicotinamide mononucleotide transporter CPP1-like PF11833.8 gi|21227310|ref|NP_633232.1| - 0.037 13.7 2.0 0.048 13.3 2.0 1.2 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF872 PF05915.12 gi|21227310|ref|NP_633232.1| - 2.1 8.5 6.9 0.55 10.4 2.3 1.9 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF2985 PF11204.8 gi|21227310|ref|NP_633232.1| - 7.7 6.7 10.1 1.7 8.9 5.1 2.4 2 2 0 2 2 2 0 Protein of unknown function (DUF2985) DUF1673 PF07895.11 gi|21227311|ref|NP_633233.1| - 4.7e-65 219.5 4.1 6.8e-64 215.7 4.1 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) TMEM190 PF15431.6 gi|21227311|ref|NP_633233.1| - 0.48 10.6 2.5 0.98 9.6 0.2 2.2 1 1 1 2 2 2 0 Transmembrane protein 190 RseC_MucC PF04246.12 gi|21227311|ref|NP_633233.1| - 4.4 7.3 4.4 2.3 8.2 0.2 2.0 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF1673 PF07895.11 gi|21227312|ref|NP_633234.1| - 4.4e-09 36.4 2.2 4.4e-09 36.4 2.2 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF1673) PyrI PF01948.18 gi|21227314|ref|NP_633236.1| - 3.4e-29 100.9 1.6 4.6e-29 100.5 1.6 1.2 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|21227314|ref|NP_633236.1| - 6e-16 58.1 5.7 6.8e-16 57.9 3.6 1.9 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.21 gi|21227315|ref|NP_633237.1| - 6.3e-49 165.8 0.0 2.9e-48 163.6 0.0 1.8 1 1 1 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|21227315|ref|NP_633237.1| - 1.9e-30 106.0 0.0 2.6e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AraC_binding_2 PF14525.6 gi|21227315|ref|NP_633237.1| - 0.11 12.2 0.1 0.16 11.6 0.1 1.2 1 0 0 1 1 1 0 AraC-binding-like domain UCH PF00443.29 gi|21227316|ref|NP_633238.1| - 0.13 11.8 0.2 0.16 11.4 0.2 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase RraA-like PF03737.15 gi|21227317|ref|NP_633239.1| - 6.9e-43 146.4 0.6 6.9e-43 146.4 0.6 2.2 2 1 1 3 3 3 1 Aldolase/RraA OMPdecase PF00215.24 gi|21227317|ref|NP_633239.1| - 2e-15 57.0 5.3 7e-15 55.2 5.3 2.0 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family NanE PF04131.14 gi|21227317|ref|NP_633239.1| - 6.1e-07 28.8 1.9 6.1e-07 28.8 1.9 1.9 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 gi|21227317|ref|NP_633239.1| - 7.3e-06 25.6 2.4 4.9e-05 22.9 1.1 2.3 1 1 1 2 2 2 1 Histidine biosynthesis protein ADH_zinc_N PF00107.26 gi|21227317|ref|NP_633239.1| - 0.00096 19.1 2.3 0.22 11.5 2.3 2.5 1 1 0 1 1 1 1 Zinc-binding dehydrogenase PdxJ PF03740.13 gi|21227317|ref|NP_633239.1| - 0.01 15.0 0.2 0.029 13.5 0.0 1.8 2 0 0 2 2 2 0 Pyridoxal phosphate biosynthesis protein PdxJ Peripla_BP_4 PF13407.6 gi|21227317|ref|NP_633239.1| - 0.022 14.3 1.6 0.035 13.7 1.6 1.3 1 0 0 1 1 1 0 Periplasmic binding protein domain IGPS PF00218.21 gi|21227317|ref|NP_633239.1| - 0.043 13.0 0.6 0.063 12.4 0.6 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase TPP_enzyme_M PF00205.22 gi|21227317|ref|NP_633239.1| - 0.073 12.8 1.0 3.4 7.4 0.0 3.2 2 2 1 3 3 3 0 Thiamine pyrophosphate enzyme, central domain Ribul_P_3_epim PF00834.19 gi|21227317|ref|NP_633239.1| - 0.095 12.1 1.9 1.1 8.6 0.3 2.4 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family DUF561 PF04481.12 gi|21227317|ref|NP_633239.1| - 0.28 10.3 2.2 1.2 8.3 0.6 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF561) Pilin_N PF07790.11 gi|21227318|ref|NP_633240.1| - 0.087 13.8 0.4 0.17 12.8 0.2 1.7 2 1 0 2 2 2 0 Archaeal Type IV pilin, N-terminal RQC PF09382.10 gi|21227319|ref|NP_633241.1| - 3.3e-35 120.3 0.0 7.7e-35 119.1 0.0 1.6 1 0 0 1 1 1 1 RQC domain Helicase_C PF00271.31 gi|21227319|ref|NP_633241.1| - 5.1e-21 75.1 0.1 3e-18 66.2 0.0 3.2 3 0 0 3 3 3 1 Helicase conserved C-terminal domain HRDC PF00570.23 gi|21227319|ref|NP_633241.1| - 5.3e-20 71.2 0.0 1.3e-19 70.0 0.0 1.6 1 0 0 1 1 1 1 HRDC domain DEAD PF00270.29 gi|21227319|ref|NP_633241.1| - 4.5e-19 68.9 0.0 1.9e-18 66.8 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase RecQ_Zn_bind PF16124.5 gi|21227319|ref|NP_633241.1| - 2.9e-17 63.1 2.6 9.8e-17 61.4 2.6 2.0 1 0 0 1 1 1 1 RecQ zinc-binding HTH_40 PF14493.6 gi|21227319|ref|NP_633241.1| - 1.2e-10 41.7 0.7 3.9e-10 40.0 0.7 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain Helicase_Sgs1 PF11408.8 gi|21227319|ref|NP_633241.1| - 1.3e-06 28.3 0.0 3.2e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Sgs1 RecQ helicase ResIII PF04851.15 gi|21227319|ref|NP_633241.1| - 0.029 14.4 0.0 0.17 11.9 0.0 2.3 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit Sigma70_r4_2 PF08281.12 gi|21227319|ref|NP_633241.1| - 0.096 12.4 0.0 0.3 10.8 0.0 1.8 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_24 PF13412.6 gi|21227319|ref|NP_633241.1| - 0.11 12.0 0.0 0.31 10.6 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|21227319|ref|NP_633241.1| - 0.14 12.0 0.1 0.4 10.6 0.1 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB GMP_synt_C PF00958.22 gi|21227320|ref|NP_633242.1| - 1.5e-30 105.1 0.0 3e-30 104.1 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|21227320|ref|NP_633242.1| - 7e-09 35.2 0.0 0.00029 20.0 0.0 2.1 2 0 0 2 2 2 2 NAD synthase QueC PF06508.13 gi|21227320|ref|NP_633242.1| - 0.00062 19.3 0.0 0.0014 18.2 0.0 1.6 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|21227320|ref|NP_633242.1| - 0.0017 17.2 0.0 0.052 12.3 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase PAPS_reduct PF01507.19 gi|21227320|ref|NP_633242.1| - 0.007 16.4 0.0 0.011 15.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ThiI PF02568.14 gi|21227320|ref|NP_633242.1| - 0.13 11.9 0.1 0.23 11.0 0.0 1.6 2 1 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 gi|21227320|ref|NP_633242.1| - 0.13 11.9 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase Radical_SAM PF04055.21 gi|21227321|ref|NP_633243.1| - 1.1e-05 25.9 0.0 2e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Pox_A3L PF05288.11 gi|21227321|ref|NP_633243.1| - 0.062 13.3 0.3 1 9.4 0.0 2.4 2 0 0 2 2 2 0 Poxvirus A3L Protein Radical_SAM_C PF16199.5 gi|21227321|ref|NP_633243.1| - 0.11 12.5 0.0 0.34 11.0 0.0 1.8 1 0 0 1 1 1 0 Radical_SAM C-terminal domain AA_kinase PF00696.28 gi|21227322|ref|NP_633244.1| - 1.5e-43 149.2 5.6 1.7e-43 149.0 5.6 1.0 1 0 0 1 1 1 1 Amino acid kinase family MC1 PF05854.11 gi|21227323|ref|NP_633245.1| - 2.7e-40 136.6 1.2 3.2e-40 136.3 1.2 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 GCHY-1 PF02649.14 gi|21227324|ref|NP_633246.1| - 2.5e-84 282.8 2.8 2.8e-84 282.7 2.8 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 FolB PF02152.18 gi|21227324|ref|NP_633246.1| - 0.00069 20.1 0.3 0.089 13.3 0.0 2.9 2 1 0 2 2 2 1 Dihydroneopterin aldolase DUF2098 PF09871.9 gi|21227325|ref|NP_633247.1| - 3.3e-23 81.8 1.3 3.8e-23 81.6 1.3 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) DUF2114 PF09887.9 gi|21227326|ref|NP_633248.1| - 1.8e-232 771.6 6.1 2.1e-232 771.5 6.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) FrhB_FdhB_C PF04432.13 gi|21227327|ref|NP_633249.1| - 1.9e-40 138.2 0.0 1.9e-40 138.2 0.0 1.8 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|21227327|ref|NP_633249.1| - 2.4e-26 91.7 0.3 2.9e-25 88.2 0.1 2.5 3 0 0 3 3 3 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term YHS PF04945.13 gi|21227327|ref|NP_633249.1| - 2.2e-11 43.7 3.2 4e-11 42.8 2.4 1.9 2 0 0 2 2 2 1 YHS domain Fer4_10 PF13237.6 gi|21227327|ref|NP_633249.1| - 0.00038 20.5 13.2 0.00038 20.5 10.9 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227327|ref|NP_633249.1| - 0.0021 18.4 14.1 0.072 13.6 1.0 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21227327|ref|NP_633249.1| - 0.018 15.2 15.2 0.033 14.4 12.3 2.8 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21227327|ref|NP_633249.1| - 0.074 12.9 18.0 0.17 11.8 3.7 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21227327|ref|NP_633249.1| - 0.2 12.2 16.2 1 9.9 1.4 3.1 2 1 3 5 5 5 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227327|ref|NP_633249.1| - 0.21 12.2 14.5 0.46 11.1 2.1 3.2 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21227327|ref|NP_633249.1| - 0.32 11.5 14.0 1.8 9.1 1.9 2.9 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227327|ref|NP_633249.1| - 0.71 10.9 13.0 2.2 9.2 0.8 3.2 3 1 1 4 4 4 0 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|21227327|ref|NP_633249.1| - 0.79 9.9 17.4 0.098 12.8 2.2 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21227327|ref|NP_633249.1| - 0.95 9.7 18.3 0.59 10.4 2.0 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain zf-FLZ PF04570.14 gi|21227327|ref|NP_633249.1| - 1.4 8.5 7.3 0.7 9.4 1.6 3.2 3 0 0 3 3 3 0 zinc-finger of the FCS-type, C2-C2 Fer4_21 PF14697.6 gi|21227327|ref|NP_633249.1| - 2.3 8.4 12.0 8.8 6.5 12.0 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21227327|ref|NP_633249.1| - 2.4 9.0 8.2 13 6.6 1.4 3.0 2 1 1 3 3 2 0 4Fe-4S single cluster domain Glu-tRNAGln PF02686.15 gi|21227328|ref|NP_633250.1| - 4.3e-17 62.2 0.7 5.6e-17 61.8 0.7 1.2 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Amidase PF01425.21 gi|21227329|ref|NP_633251.1| - 2.1e-163 544.5 0.0 2.4e-163 544.3 0.0 1.0 1 0 0 1 1 1 1 Amidase PSII_BNR PF14870.6 gi|21227329|ref|NP_633251.1| - 0.075 12.3 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Photosynthesis system II assembly factor YCF48 GatB_N PF02934.15 gi|21227330|ref|NP_633252.1| - 7.5e-103 343.6 0.0 1e-102 343.2 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|21227330|ref|NP_633252.1| - 6e-49 165.7 0.2 9.1e-49 165.1 0.2 1.3 1 0 0 1 1 1 1 GatB domain CN_hydrolase PF00795.22 gi|21227331|ref|NP_633253.1| - 3.2e-45 154.5 0.0 3.7e-45 154.3 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF1056 PF06341.11 gi|21227332|ref|NP_633254.1| - 5.9 7.3 12.0 0.43 10.9 3.1 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1056) Methyltransf_31 PF13847.6 gi|21227333|ref|NP_633255.1| - 8.2e-20 71.1 0.0 9.7e-20 70.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21227333|ref|NP_633255.1| - 1.4e-17 64.2 0.0 1.8e-17 63.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21227333|ref|NP_633255.1| - 5.1e-14 52.8 0.0 7.1e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21227333|ref|NP_633255.1| - 3.2e-12 46.6 0.0 4e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21227333|ref|NP_633255.1| - 1.9e-11 44.6 0.0 2.6e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21227333|ref|NP_633255.1| - 1.2e-08 34.6 0.0 1.4e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|21227333|ref|NP_633255.1| - 8.7e-07 28.7 0.0 1.2e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Fibrillarin PF01269.17 gi|21227333|ref|NP_633255.1| - 3.5e-06 26.3 0.0 4.2e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin MTS PF05175.14 gi|21227333|ref|NP_633255.1| - 2.1e-05 24.2 0.0 2.3e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|21227333|ref|NP_633255.1| - 0.00012 21.5 0.0 0.00014 21.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 gi|21227333|ref|NP_633255.1| - 0.00014 21.3 0.0 0.00019 20.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB FtsJ PF01728.19 gi|21227333|ref|NP_633255.1| - 0.00027 21.1 0.0 0.00033 20.8 0.0 1.3 1 1 0 1 1 1 1 FtsJ-like methyltransferase PCMT PF01135.19 gi|21227333|ref|NP_633255.1| - 0.00047 20.0 0.0 0.00054 19.8 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|21227333|ref|NP_633255.1| - 0.0011 18.4 0.0 0.0014 18.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase FmrO PF07091.11 gi|21227333|ref|NP_633255.1| - 0.0089 15.6 0.0 0.0096 15.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) TPMT PF05724.11 gi|21227333|ref|NP_633255.1| - 0.018 14.7 0.0 0.022 14.4 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_29 PF03141.16 gi|21227333|ref|NP_633255.1| - 0.023 13.2 0.0 0.049 12.2 0.0 1.5 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Met_10 PF02475.16 gi|21227333|ref|NP_633255.1| - 0.024 14.4 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein GCD14 PF08704.10 gi|21227333|ref|NP_633255.1| - 0.05 13.3 0.0 0.081 12.6 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_24 PF13578.6 gi|21227333|ref|NP_633255.1| - 0.11 13.6 0.0 0.15 13.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain VKOR PF07884.14 gi|21227335|ref|NP_633257.1| - 0.012 15.8 2.4 0.021 15.0 2.4 1.3 1 0 0 1 1 1 0 Vitamin K epoxide reductase family C1_1 PF00130.22 gi|21227335|ref|NP_633257.1| - 0.018 14.9 3.7 0.84 9.6 0.8 2.7 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Ammonium_transp PF00909.21 gi|21227335|ref|NP_633257.1| - 0.041 12.6 1.0 0.057 12.1 1.0 1.2 1 0 0 1 1 1 0 Ammonium Transporter Family Zn_Tnp_IS1595 PF12760.7 gi|21227335|ref|NP_633257.1| - 0.042 13.8 2.0 0.042 13.8 2.0 3.1 2 1 0 2 2 2 0 Transposase zinc-ribbon domain zf-RanBP PF00641.18 gi|21227335|ref|NP_633257.1| - 0.078 12.3 0.2 0.078 12.3 0.2 2.9 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others Rubredoxin_2 PF18073.1 gi|21227335|ref|NP_633257.1| - 0.1 12.4 13.7 2.4 7.9 0.3 4.3 4 0 0 4 4 4 0 Rubredoxin metal binding domain HypA PF01155.19 gi|21227335|ref|NP_633257.1| - 0.2 11.7 8.8 2.6 8.1 1.2 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rpr2 PF04032.16 gi|21227335|ref|NP_633257.1| - 2.3 8.5 13.4 44 4.4 7.9 2.7 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain MCM_OB PF17207.3 gi|21227335|ref|NP_633257.1| - 6.3 6.7 10.2 0.32 10.8 1.8 2.5 1 1 1 2 2 2 0 MCM OB domain FYVE PF01363.21 gi|21227335|ref|NP_633257.1| - 6.4 7.0 12.1 1e+02 3.1 12.1 2.6 1 1 0 1 1 1 0 FYVE zinc finger Zn-ribbon_8 PF09723.10 gi|21227335|ref|NP_633257.1| - 6.7 6.9 13.7 14 5.8 0.3 3.9 3 1 0 3 3 3 0 Zinc ribbon domain RibD_C PF01872.17 gi|21227336|ref|NP_633258.1| - 1.6e-16 60.8 0.0 1.8e-16 60.6 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain DHFR_1 PF00186.19 gi|21227336|ref|NP_633258.1| - 4.5e-06 26.5 0.0 4.8e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Dihydrofolate reductase NTS PF15447.6 gi|21227336|ref|NP_633258.1| - 0.019 15.5 0.0 0.044 14.3 0.0 1.5 1 0 0 1 1 1 0 N-terminal segments of PfEMP1 Mrr_cat PF04471.12 gi|21227337|ref|NP_633259.1| - 3.5e-36 123.7 0.0 5.6e-36 123.1 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease Mrr_N PF14338.6 gi|21227337|ref|NP_633259.1| - 5.2e-33 113.0 0.1 8.7e-33 112.3 0.1 1.4 1 0 0 1 1 1 1 Mrr N-terminal domain Mrr_cat_2 PF13156.6 gi|21227337|ref|NP_633259.1| - 6.1e-11 42.3 0.0 1.7e-10 40.8 0.0 1.7 2 0 0 2 2 2 1 Restriction endonuclease Peptidase_M48 PF01435.18 gi|21227338|ref|NP_633260.1| - 1.5e-35 122.8 0.1 2.2e-35 122.2 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|21227338|ref|NP_633260.1| - 0.00013 21.3 0.0 0.00022 20.6 0.0 1.4 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF4118 PF13493.6 gi|21227338|ref|NP_633260.1| - 6.1 6.7 9.0 3.8 7.4 2.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4118) Thymidylat_synt PF00303.19 gi|21227339|ref|NP_633261.1| - 9e-22 77.5 0.0 1.3e-21 77.0 0.0 1.2 1 1 0 1 1 1 1 Thymidylate synthase BNR_6 PF15899.5 gi|21227339|ref|NP_633261.1| - 0.056 13.5 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 BNR-Asp box repeat EPSP_synthase PF00275.20 gi|21227340|ref|NP_633262.1| - 5.8e-111 371.1 1.0 6.9e-111 370.9 1.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PrmA PF06325.13 gi|21227341|ref|NP_633263.1| - 1.3e-05 24.7 0.0 3.5e-05 23.3 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|21227341|ref|NP_633263.1| - 2.9e-05 23.7 0.0 5.1e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|21227341|ref|NP_633263.1| - 9e-05 23.1 0.0 0.0013 19.4 0.0 2.7 3 1 0 3 3 3 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|21227341|ref|NP_633263.1| - 0.0039 16.9 0.0 0.0069 16.0 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 AAA_31 PF13614.6 gi|21227341|ref|NP_633263.1| - 0.057 13.3 0.0 0.17 11.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain Methyltransf_31 PF13847.6 gi|21227341|ref|NP_633263.1| - 0.13 12.1 0.1 0.78 9.5 0.0 2.2 2 1 0 2 2 2 0 Methyltransferase domain MCR_alpha_N PF02745.15 gi|21227342|ref|NP_633264.1| - 8.9e-145 481.1 1.7 1.2e-144 480.7 1.7 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.17 gi|21227342|ref|NP_633264.1| - 2e-66 222.2 4.7 2e-66 222.2 4.7 2.1 2 0 0 2 2 2 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_gamma PF02240.16 gi|21227343|ref|NP_633265.1| - 8e-117 388.8 0.2 9.1e-117 388.6 0.2 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_C PF04609.12 gi|21227344|ref|NP_633266.1| - 6.1e-07 28.8 0.6 7.8e-07 28.4 0.6 1.3 1 1 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C MCR_D PF02505.14 gi|21227345|ref|NP_633267.1| - 4.8e-57 191.8 0.1 5.6e-57 191.6 0.1 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D DUF4426 PF14467.6 gi|21227345|ref|NP_633267.1| - 0.12 12.4 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4426) MCR_beta PF02241.18 gi|21227346|ref|NP_633268.1| - 1.9e-137 456.8 7.5 3.2e-137 456.1 7.5 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.15 gi|21227346|ref|NP_633268.1| - 5.7e-80 267.2 2.3 5.7e-80 267.2 2.3 2.0 2 0 0 2 2 2 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain Radical_SAM PF04055.21 gi|21227347|ref|NP_633269.1| - 6.9e-11 42.8 5.6 4.6e-09 36.9 5.6 2.7 1 1 0 1 1 1 1 Radical SAM superfamily LSM PF01423.22 gi|21227347|ref|NP_633269.1| - 0.059 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 LSM domain PolC_DP2 PF03833.13 gi|21227348|ref|NP_633270.1| - 0 1297.1 0.0 0 1296.3 0.0 1.4 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 zinc-ribbons_6 PF07191.12 gi|21227348|ref|NP_633270.1| - 0.0032 17.4 9.7 1.1 9.3 7.1 2.6 2 0 0 2 2 2 2 zinc-ribbons HTH_3 PF01381.22 gi|21227348|ref|NP_633270.1| - 0.041 13.9 1.4 1.2 9.2 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix HypA PF01155.19 gi|21227348|ref|NP_633270.1| - 0.21 11.6 12.8 0.46 10.5 0.1 3.3 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TerY_C PF15616.6 gi|21227348|ref|NP_633270.1| - 2 8.5 14.6 0.46 10.6 8.7 2.6 2 1 0 2 2 2 0 TerY-C metal binding domain DZR PF12773.7 gi|21227348|ref|NP_633270.1| - 3.7 7.7 20.5 0.68 10.0 0.5 3.1 3 1 0 3 3 3 0 Double zinc ribbon MarC PF01914.17 gi|21227349|ref|NP_633271.1| - 0.0066 15.9 0.5 0.0072 15.7 0.5 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein Sua5_yciO_yrdC PF01300.18 gi|21227350|ref|NP_633272.1| - 3e-55 186.5 0.0 4.2e-55 186.0 0.0 1.2 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 gi|21227350|ref|NP_633272.1| - 2.5e-25 89.6 0.0 4.4e-25 88.8 0.0 1.4 1 0 0 1 1 1 1 Putative GTP-binding controlling metal-binding DUF613 PF04764.12 gi|21227350|ref|NP_633272.1| - 0.18 11.9 0.0 0.34 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF613) MAP2_projctn PF08377.10 gi|21227350|ref|NP_633272.1| - 0.2 9.6 0.0 0.27 9.2 0.0 1.0 1 0 0 1 1 1 0 MAP2/Tau projection domain RuBisCO_large PF00016.20 gi|21227351|ref|NP_633273.1| - 2.1e-104 348.9 0.1 2.6e-104 348.6 0.1 1.1 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 gi|21227351|ref|NP_633273.1| - 2e-41 140.9 0.0 5.6e-41 139.5 0.0 1.8 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain DUF1646 PF07854.12 gi|21227352|ref|NP_633274.1| - 8.3e-132 439.8 29.7 9.8e-132 439.5 29.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DHHC PF01529.20 gi|21227352|ref|NP_633274.1| - 8.4 6.5 6.6 25 5.0 0.1 3.2 1 1 2 3 3 3 0 DHHC palmitoyltransferase DUF1646 PF07854.12 gi|21227353|ref|NP_633275.1| - 4.9e-132 440.5 24.7 5.7e-132 440.3 24.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DUF1646 PF07854.12 gi|21227354|ref|NP_633276.1| - 7.7e-132 439.9 26.3 8.9e-132 439.7 26.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DUF1646 PF07854.12 gi|21227355|ref|NP_633277.1| - 2.1e-130 435.1 27.0 2.5e-130 434.9 27.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) AmoC PF04896.12 gi|21227355|ref|NP_633277.1| - 0.015 14.6 1.0 0.038 13.2 1.0 1.7 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C DHHC PF01529.20 gi|21227355|ref|NP_633277.1| - 0.96 9.6 3.9 38 4.4 2.0 3.1 2 1 0 2 2 2 0 DHHC palmitoyltransferase ArsA_HSP20 PF17886.1 gi|21227356|ref|NP_633278.1| - 9.5e-06 25.1 0.0 1.3e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|21227356|ref|NP_633278.1| - 1.7e-05 24.9 0.5 0.00017 21.7 0.1 2.0 1 1 1 2 2 2 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|21227357|ref|NP_633279.1| - 3e-08 33.1 0.0 4.5e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|21227357|ref|NP_633279.1| - 3.5e-08 33.5 0.5 4.9e-06 26.6 0.5 2.2 1 1 0 1 1 1 1 Hsp20/alpha crystallin family AAA PF00004.29 gi|21227358|ref|NP_633280.1| - 2.6e-100 332.0 0.1 1.9e-49 167.5 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|21227358|ref|NP_633280.1| - 1.3e-32 111.3 1.0 9.6e-16 57.3 0.2 3.0 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|21227358|ref|NP_633280.1| - 2.1e-29 101.5 0.7 7.4e-28 96.6 1.2 2.7 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.14 gi|21227358|ref|NP_633280.1| - 6.1e-17 62.3 0.0 6.3e-07 29.7 0.0 3.2 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|21227358|ref|NP_633280.1| - 2.1e-16 60.1 0.0 5.8e-08 32.6 0.0 3.1 2 2 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|21227358|ref|NP_633280.1| - 1.7e-15 57.8 0.1 2.2e-06 28.1 0.0 3.5 2 1 1 3 3 3 2 AAA ATPase domain CDC48_2 PF02933.17 gi|21227358|ref|NP_633280.1| - 4.6e-15 55.2 0.5 1.5e-14 53.5 0.3 2.0 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 AAA_5 PF07728.14 gi|21227358|ref|NP_633280.1| - 1e-12 48.3 1.3 6.7e-05 22.9 0.1 4.0 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) TIP49 PF06068.13 gi|21227358|ref|NP_633280.1| - 9.9e-12 44.7 0.0 5.3e-05 22.6 0.0 2.5 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|21227358|ref|NP_633280.1| - 2.2e-11 44.1 0.0 5.6e-05 23.3 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|21227358|ref|NP_633280.1| - 4.2e-11 43.3 2.8 0.00079 19.7 0.0 4.5 3 2 1 4 4 3 2 AAA domain AAA_14 PF13173.6 gi|21227358|ref|NP_633280.1| - 4.5e-11 42.9 0.0 0.00015 21.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 gi|21227358|ref|NP_633280.1| - 2.1e-08 34.0 0.1 0.013 15.3 0.0 3.9 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_18 PF13238.6 gi|21227358|ref|NP_633280.1| - 1.1e-07 32.4 0.0 0.016 15.8 0.0 2.9 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|21227358|ref|NP_633280.1| - 1.7e-07 30.9 0.0 0.015 14.7 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|21227358|ref|NP_633280.1| - 2.4e-07 30.6 0.0 0.014 15.2 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_28 PF13521.6 gi|21227358|ref|NP_633280.1| - 3.5e-07 30.6 0.8 0.026 14.7 0.0 3.1 3 0 0 3 3 3 2 AAA domain AAA_3 PF07726.11 gi|21227358|ref|NP_633280.1| - 4e-07 30.0 0.0 0.018 14.9 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|21227358|ref|NP_633280.1| - 4.4e-07 29.6 0.0 0.018 14.6 0.0 2.8 3 0 0 3 3 2 2 P-loop containing dynein motor region ABC_tran PF00005.27 gi|21227358|ref|NP_633280.1| - 5.1e-07 30.3 0.0 0.054 14.0 0.0 2.8 2 0 0 2 2 2 2 ABC transporter RNA_helicase PF00910.22 gi|21227358|ref|NP_633280.1| - 4.1e-06 27.1 0.0 0.092 13.1 0.0 2.6 2 0 0 2 2 2 2 RNA helicase Vps4_C PF09336.10 gi|21227358|ref|NP_633280.1| - 4.3e-06 26.6 1.4 0.0021 18.0 0.0 3.5 3 0 0 3 3 3 1 Vps4 C terminal oligomerisation domain TsaE PF02367.17 gi|21227358|ref|NP_633280.1| - 7.7e-06 25.9 0.0 0.13 12.3 0.0 2.9 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 gi|21227358|ref|NP_633280.1| - 8.1e-06 25.2 2.5 0.029 13.6 0.0 3.0 3 0 0 3 3 3 2 Zeta toxin DUF815 PF05673.13 gi|21227358|ref|NP_633280.1| - 8.9e-06 25.0 0.0 0.09 11.9 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF815) NACHT PF05729.12 gi|21227358|ref|NP_633280.1| - 9e-06 25.7 0.3 0.42 10.5 0.0 3.9 2 2 1 3 3 3 2 NACHT domain AAA_24 PF13479.6 gi|21227358|ref|NP_633280.1| - 1.5e-05 24.8 0.0 0.16 11.7 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|21227358|ref|NP_633280.1| - 2.6e-05 23.9 1.0 1.8 8.1 0.0 4.1 4 0 0 4 4 4 2 AAA domain AAA_17 PF13207.6 gi|21227358|ref|NP_633280.1| - 2.9e-05 24.5 0.0 0.061 13.7 0.0 3.0 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|21227358|ref|NP_633280.1| - 4.4e-05 22.8 0.0 0.41 9.8 0.0 2.8 2 1 0 2 2 2 2 NB-ARC domain AAA_30 PF13604.6 gi|21227358|ref|NP_633280.1| - 6.5e-05 22.7 0.1 0.32 10.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|21227358|ref|NP_633280.1| - 8.1e-05 22.2 0.1 0.25 10.7 0.0 2.7 2 0 0 2 2 2 2 PhoH-like protein AAA_19 PF13245.6 gi|21227358|ref|NP_633280.1| - 0.0001 22.6 0.7 0.52 10.6 0.0 3.0 2 1 1 3 3 2 2 AAA domain AAA_11 PF13086.6 gi|21227358|ref|NP_633280.1| - 0.00014 21.7 2.0 0.28 10.9 0.0 3.1 3 0 0 3 3 3 1 AAA domain Sigma54_activ_2 PF14532.6 gi|21227358|ref|NP_633280.1| - 0.00019 21.6 0.0 0.64 10.1 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain Parvo_NS1 PF01057.17 gi|21227358|ref|NP_633280.1| - 0.00039 19.6 0.0 0.91 8.6 0.0 2.4 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 DUF2075 PF09848.9 gi|21227358|ref|NP_633280.1| - 0.00059 19.2 0.0 0.59 9.3 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) TniB PF05621.11 gi|21227358|ref|NP_633280.1| - 0.00099 18.6 0.0 0.77 9.1 0.0 3.4 3 1 1 4 4 3 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|21227358|ref|NP_633280.1| - 0.0014 18.6 3.5 1.4 8.7 0.0 3.8 3 2 1 4 4 3 1 ATPase domain predominantly from Archaea AFG1_ATPase PF03969.16 gi|21227358|ref|NP_633280.1| - 0.0014 17.6 0.0 0.57 9.0 0.0 2.5 2 0 0 2 2 2 1 AFG1-like ATPase Bac_DnaA PF00308.18 gi|21227358|ref|NP_633280.1| - 0.0019 18.1 0.0 3.2 7.5 0.0 2.8 2 1 0 2 2 2 0 Bacterial dnaA protein Guanylate_kin PF00625.21 gi|21227358|ref|NP_633280.1| - 0.003 17.3 0.7 5.7 6.6 0.0 4.3 2 2 1 3 3 3 0 Guanylate kinase ATP-synt_ab PF00006.25 gi|21227358|ref|NP_633280.1| - 0.0033 17.1 0.0 2.8 7.5 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain Viral_helicase1 PF01443.18 gi|21227358|ref|NP_633280.1| - 0.0046 16.7 0.0 1.8 8.3 0.0 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase Cytidylate_kin PF02224.18 gi|21227358|ref|NP_633280.1| - 0.0051 16.6 0.1 1.6 8.4 0.0 2.7 2 0 0 2 2 2 1 Cytidylate kinase NTPase_1 PF03266.15 gi|21227358|ref|NP_633280.1| - 0.0067 16.4 6.0 5.2 6.9 0.0 4.6 3 2 1 4 4 4 0 NTPase ATPase PF06745.13 gi|21227358|ref|NP_633280.1| - 0.0079 15.6 8.7 1.9 7.8 0.0 4.6 4 2 2 6 6 5 1 KaiC DUF1677 PF07911.13 gi|21227358|ref|NP_633280.1| - 0.0087 16.4 0.0 0.87 10.0 0.0 2.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1677) CPT PF07931.12 gi|21227358|ref|NP_633280.1| - 0.0089 15.9 0.0 1.3 8.8 0.0 2.9 3 0 0 3 3 3 1 Chloramphenicol phosphotransferase-like protein ResIII PF04851.15 gi|21227358|ref|NP_633280.1| - 0.01 15.8 0.7 3.6 7.6 0.0 3.3 3 2 1 4 4 3 0 Type III restriction enzyme, res subunit Rad17 PF03215.15 gi|21227358|ref|NP_633280.1| - 0.044 13.7 0.0 17 5.3 0.0 2.8 2 1 0 2 2 2 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|21227358|ref|NP_633280.1| - 0.044 13.5 0.0 11 5.9 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain Hydin_ADK PF17213.3 gi|21227358|ref|NP_633280.1| - 0.045 14.0 4.3 0.79 10.0 0.0 3.3 4 0 0 4 4 3 0 Hydin Adenylate kinase-like domain SKI PF01202.22 gi|21227358|ref|NP_633280.1| - 0.049 13.8 3.8 4.5 7.4 0.0 3.4 3 0 0 3 3 3 0 Shikimate kinase IPT PF01745.16 gi|21227358|ref|NP_633280.1| - 0.053 12.9 0.1 11 5.3 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase MCM PF00493.23 gi|21227358|ref|NP_633280.1| - 0.065 12.3 0.0 9.3 5.3 0.0 3.0 2 1 0 2 2 2 0 MCM P-loop domain Torsin PF06309.11 gi|21227358|ref|NP_633280.1| - 0.083 13.0 0.0 5.3 7.2 0.0 2.5 2 0 0 2 2 2 0 Torsin Cytidylate_kin2 PF13189.6 gi|21227358|ref|NP_633280.1| - 0.14 12.3 6.2 4.6 7.3 0.0 3.4 4 0 0 4 4 3 0 Cytidylate kinase-like family Zot PF05707.12 gi|21227358|ref|NP_633280.1| - 0.16 11.6 0.1 28 4.3 0.0 3.5 2 2 1 3 3 3 0 Zonular occludens toxin (Zot) HTH_5 PF01022.20 gi|21227359|ref|NP_633281.1| - 3e-16 59.0 0.2 1.3e-11 44.1 0.1 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21227359|ref|NP_633281.1| - 2.2e-11 43.6 0.1 9e-08 32.1 0.0 2.5 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.7 gi|21227359|ref|NP_633281.1| - 1.2e-07 31.5 0.0 0.016 15.1 0.0 2.4 2 0 0 2 2 2 2 MarR family TrmB PF01978.19 gi|21227359|ref|NP_633281.1| - 0.00011 22.0 0.0 0.11 12.4 0.0 2.4 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB DprA_WH PF17782.1 gi|21227359|ref|NP_633281.1| - 0.00021 21.4 0.0 0.00046 20.2 0.0 1.6 1 0 0 1 1 1 1 DprA winged helix domain HTH_34 PF13601.6 gi|21227359|ref|NP_633281.1| - 0.0005 20.2 0.0 0.05 13.8 0.0 2.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain LexA_DNA_bind PF01726.16 gi|21227359|ref|NP_633281.1| - 0.00055 19.6 0.0 0.21 11.4 0.0 2.6 2 0 0 2 2 2 1 LexA DNA binding domain HTH_Crp_2 PF13545.6 gi|21227359|ref|NP_633281.1| - 0.0013 18.7 0.3 0.69 9.9 0.0 2.8 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain DUF4527 PF15030.6 gi|21227359|ref|NP_633281.1| - 0.0015 18.0 1.3 0.0021 17.6 1.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4527) HTH_27 PF13463.6 gi|21227359|ref|NP_633281.1| - 0.0026 18.2 0.1 0.58 10.7 0.0 2.7 3 0 0 3 3 3 1 Winged helix DNA-binding domain DUF2513 PF10711.9 gi|21227359|ref|NP_633281.1| - 0.007 16.6 0.1 0.062 13.6 0.0 2.4 2 1 0 2 2 2 1 Hypothetical protein (DUF2513) MarR PF01047.22 gi|21227359|ref|NP_633281.1| - 0.013 15.4 0.0 0.13 12.2 0.0 2.3 2 0 0 2 2 2 0 MarR family PadR PF03551.14 gi|21227359|ref|NP_633281.1| - 0.014 15.4 0.0 2.3 8.2 0.0 3.2 3 1 0 3 3 3 0 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|21227359|ref|NP_633281.1| - 0.015 14.9 4.1 0.019 14.5 0.5 3.1 3 1 0 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|21227359|ref|NP_633281.1| - 0.025 14.5 0.8 0.067 13.1 0.0 2.1 3 0 0 3 3 3 0 HTH domain OmpH PF03938.14 gi|21227359|ref|NP_633281.1| - 0.026 14.9 0.6 0.037 14.4 0.6 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF742 PF05331.11 gi|21227359|ref|NP_633281.1| - 0.034 14.0 0.0 2.5 7.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF742) HTH_36 PF13730.6 gi|21227359|ref|NP_633281.1| - 0.05 13.6 0.0 0.14 12.1 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|21227359|ref|NP_633281.1| - 0.068 13.5 0.1 0.64 10.4 0.0 2.4 3 0 0 3 3 3 0 Transcriptional regulator HTH_45 PF14947.6 gi|21227359|ref|NP_633281.1| - 0.092 12.7 0.0 0.91 9.5 0.0 2.5 2 1 1 3 3 3 0 Winged helix-turn-helix CBM_4_9 PF02018.17 gi|21227360|ref|NP_633282.1| - 0.021 15.1 0.4 0.036 14.3 0.4 1.4 1 0 0 1 1 1 0 Carbohydrate binding domain DASH_Spc19 PF08287.11 gi|21227361|ref|NP_633283.1| - 0.025 14.5 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Spc19 SlyX PF04102.12 gi|21227361|ref|NP_633283.1| - 0.036 14.7 0.1 0.054 14.1 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.11 gi|21227361|ref|NP_633283.1| - 0.22 11.3 0.4 0.22 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.14 gi|21227362|ref|NP_633284.1| - 2.5e-73 247.0 0.0 2.9e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21227362|ref|NP_633284.1| - 4.8e-10 39.7 6.7 1.3e-09 38.2 6.7 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21227362|ref|NP_633284.1| - 0.00015 22.0 1.1 0.62 10.3 0.0 3.0 2 1 1 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|21227362|ref|NP_633284.1| - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) zf-RING_5 PF14634.6 gi|21227362|ref|NP_633284.1| - 0.34 10.9 7.9 1 9.4 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21227362|ref|NP_633284.1| - 1.2 10.0 7.5 0.17 12.6 2.9 2.0 2 0 0 2 2 2 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|21227362|ref|NP_633284.1| - 1.3 9.7 5.2 31 5.3 0.5 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF2072 PF09845.9 gi|21227363|ref|NP_633285.1| - 7.8e-46 155.6 0.1 9.5e-46 155.4 0.1 1.1 1 0 0 1 1 1 1 Zn-ribbon containing protein Zn-ribbon_8 PF09723.10 gi|21227363|ref|NP_633285.1| - 0.0052 16.9 0.7 0.012 15.8 0.7 1.5 1 0 0 1 1 1 1 Zinc ribbon domain AnfO_nitrog PF09582.10 gi|21227363|ref|NP_633285.1| - 0.023 14.0 0.8 0.062 12.6 0.8 1.7 1 1 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) Prok-RING_1 PF14446.6 gi|21227363|ref|NP_633285.1| - 0.082 12.8 0.6 0.16 11.9 0.6 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.6 gi|21227363|ref|NP_633285.1| - 0.088 12.2 2.8 3.1 7.3 0.7 2.2 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|21227363|ref|NP_633285.1| - 0.095 12.2 1.1 1.6 8.3 0.1 2.6 2 0 0 2 2 2 0 TFIIB zinc-binding Nudix_N_2 PF14803.6 gi|21227363|ref|NP_633285.1| - 1.1 9.3 4.1 6.4 6.8 0.4 2.4 1 1 0 1 1 1 0 Nudix N-terminal zinc_ribbon_4 PF13717.6 gi|21227363|ref|NP_633285.1| - 3.7 7.6 5.4 2.4 8.1 0.7 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Pribosyltran PF00156.27 gi|21227364|ref|NP_633286.1| - 5.4e-19 68.3 0.0 7.7e-19 67.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|21227364|ref|NP_633286.1| - 0.11 12.0 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase DUF1724 PF08350.10 gi|21227365|ref|NP_633287.1| - 7.4e-16 58.0 0.1 1.8e-15 56.8 0.1 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_11 PF08279.12 gi|21227365|ref|NP_633287.1| - 0.025 14.5 0.1 0.077 13.0 0.1 1.8 1 0 0 1 1 1 0 HTH domain HEPN-like_int PF18867.1 gi|21227365|ref|NP_633287.1| - 0.028 14.3 0.3 0.072 13.0 0.2 1.8 1 1 0 1 1 1 0 HEPN-like integron domain HTH_45 PF14947.6 gi|21227365|ref|NP_633287.1| - 0.041 13.9 0.3 0.091 12.8 0.3 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_27 PF13463.6 gi|21227365|ref|NP_633287.1| - 0.049 14.1 0.0 0.13 12.8 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|21227365|ref|NP_633287.1| - 0.1 12.7 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Inhibitor_I42 PF09394.10 gi|21227367|ref|NP_633289.1| - 3.4e-14 53.0 0.1 3.7e-14 52.9 0.1 1.0 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 Big_3_5 PF16640.5 gi|21227367|ref|NP_633289.1| - 0.13 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) zf-FCS PF06467.14 gi|21227368|ref|NP_633290.1| - 0.023 14.6 3.3 0.023 14.6 3.3 1.8 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif zf-C4_ClpX PF06689.13 gi|21227368|ref|NP_633290.1| - 0.083 12.8 6.3 0.21 11.5 0.2 2.4 2 0 0 2 2 2 0 ClpX C4-type zinc finger SRP54 PF00448.22 gi|21227369|ref|NP_633291.1| - 5.3e-71 238.3 0.4 8.4e-71 237.7 0.4 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|21227369|ref|NP_633291.1| - 2.1e-29 102.1 3.3 8e-29 100.2 2.5 2.3 2 0 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|21227369|ref|NP_633291.1| - 1.5e-23 82.8 0.3 1.7e-20 73.0 0.0 2.8 2 0 0 2 2 2 2 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|21227369|ref|NP_633291.1| - 1.2e-06 28.5 0.0 3e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain APS_kinase PF01583.20 gi|21227369|ref|NP_633291.1| - 0.00029 20.8 0.0 0.00093 19.1 0.0 1.9 1 0 0 1 1 1 1 Adenylylsulphate kinase Zeta_toxin PF06414.12 gi|21227369|ref|NP_633291.1| - 0.00047 19.5 0.1 0.00093 18.5 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 gi|21227369|ref|NP_633291.1| - 0.00071 19.8 0.0 0.0015 18.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain 6PF2K PF01591.18 gi|21227369|ref|NP_633291.1| - 0.00073 18.9 0.0 0.0016 17.8 0.0 1.5 1 0 0 1 1 1 1 6-phosphofructo-2-kinase AAA_17 PF13207.6 gi|21227369|ref|NP_633291.1| - 0.0014 19.0 0.9 0.081 13.4 0.1 2.8 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 gi|21227369|ref|NP_633291.1| - 0.006 16.2 0.5 0.036 13.7 0.4 2.2 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 gi|21227369|ref|NP_633291.1| - 0.0075 16.7 0.0 0.015 15.7 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain MeaB PF03308.16 gi|21227369|ref|NP_633291.1| - 0.009 15.0 0.0 0.025 13.6 0.0 1.7 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 gi|21227369|ref|NP_633291.1| - 0.011 15.6 0.1 0.024 14.5 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B KTI12 PF08433.10 gi|21227369|ref|NP_633291.1| - 0.012 15.0 0.0 0.027 13.9 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Thymidylate_kin PF02223.17 gi|21227369|ref|NP_633291.1| - 0.013 15.2 0.2 0.053 13.2 0.1 2.1 2 0 0 2 2 2 0 Thymidylate kinase ParA PF10609.9 gi|21227369|ref|NP_633291.1| - 0.036 13.5 0.0 0.066 12.6 0.0 1.5 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase AAA_22 PF13401.6 gi|21227369|ref|NP_633291.1| - 0.049 13.9 0.0 0.14 12.4 0.0 1.9 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|21227369|ref|NP_633291.1| - 0.053 12.7 0.8 6.4 5.9 0.1 2.4 2 0 0 2 2 2 0 NB-ARC domain MMR_HSR1 PF01926.23 gi|21227369|ref|NP_633291.1| - 0.056 13.5 0.1 0.21 11.7 0.1 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 gi|21227369|ref|NP_633291.1| - 0.07 12.9 0.4 0.33 10.7 0.0 2.2 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein Spectrin PF00435.21 gi|21227369|ref|NP_633291.1| - 0.077 13.5 0.6 18 5.9 0.0 2.9 3 0 0 3 3 2 0 Spectrin repeat PFOR_II PF17147.4 gi|21227369|ref|NP_633291.1| - 0.09 13.1 0.1 0.97 9.8 0.0 2.6 2 0 0 2 2 2 0 Pyruvate:ferredoxin oxidoreductase core domain II NTPase_1 PF03266.15 gi|21227369|ref|NP_633291.1| - 0.11 12.5 0.3 0.54 10.2 0.1 2.2 1 1 1 2 2 2 0 NTPase NACHT PF05729.12 gi|21227369|ref|NP_633291.1| - 0.18 11.7 0.1 0.32 10.9 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_28 PF13521.6 gi|21227369|ref|NP_633291.1| - 0.21 11.8 0.4 0.63 10.3 0.2 1.9 1 1 1 2 2 2 0 AAA domain VESA1_N PF12785.7 gi|21227370|ref|NP_633292.1| - 0.0031 16.6 0.2 1.1 8.1 0.0 2.0 1 1 1 2 2 2 2 Variant erythrocyte surface antigen-1 GATase PF00117.28 gi|21227372|ref|NP_633294.1| - 2.4e-41 141.6 0.0 2.7e-41 141.4 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|21227372|ref|NP_633294.1| - 2.7e-13 50.2 1.3 7.9e-12 45.4 0.6 2.7 1 1 1 2 2 2 1 Peptidase C26 DeoC PF01791.9 gi|21227373|ref|NP_633295.1| - 7.1e-64 215.6 0.1 8.2e-64 215.4 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase OMPdecase PF00215.24 gi|21227373|ref|NP_633295.1| - 0.1 12.2 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family DHQS PF01959.16 gi|21227374|ref|NP_633296.1| - 4.7e-146 486.2 0.5 5.4e-146 486.0 0.5 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II Peripla_BP_4 PF13407.6 gi|21227374|ref|NP_633296.1| - 0.013 15.1 0.6 2.4 7.6 0.0 2.7 3 0 0 3 3 3 0 Periplasmic binding protein domain QRPTase_C PF01729.19 gi|21227374|ref|NP_633296.1| - 0.046 13.5 0.2 0.11 12.2 0.1 1.6 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain DHquinase_I PF01487.15 gi|21227375|ref|NP_633297.1| - 4.7e-55 187.3 0.1 5.3e-55 187.1 0.1 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase HMGL-like PF00682.19 gi|21227375|ref|NP_633297.1| - 0.0037 16.9 0.1 1 8.8 0.0 2.3 2 0 0 2 2 2 2 HMGL-like dCache_3 PF14827.6 gi|21227375|ref|NP_633297.1| - 0.015 15.0 0.0 0.31 10.6 0.0 2.1 1 1 0 2 2 2 0 Double sensory domain of two-component sensor kinase Shikimate_dh_N PF08501.11 gi|21227376|ref|NP_633298.1| - 9.7e-25 86.6 0.0 2.1e-24 85.5 0.0 1.6 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|21227376|ref|NP_633298.1| - 1.2e-14 53.8 0.4 2.6e-14 52.7 0.4 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|21227376|ref|NP_633298.1| - 2e-10 40.8 0.0 3.4e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|21227376|ref|NP_633298.1| - 0.00019 21.9 0.2 0.00037 21.0 0.2 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|21227376|ref|NP_633298.1| - 0.00029 20.2 0.3 0.0017 17.7 0.2 2.2 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|21227376|ref|NP_633298.1| - 0.0061 17.0 0.1 0.0092 16.4 0.1 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding adh_short PF00106.25 gi|21227376|ref|NP_633298.1| - 0.0067 15.9 1.5 0.014 14.9 1.5 1.6 1 1 0 1 1 1 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|21227376|ref|NP_633298.1| - 0.019 15.3 0.4 0.044 14.1 0.4 1.6 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 gi|21227376|ref|NP_633298.1| - 0.02 14.5 0.2 0.049 13.3 0.2 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Pyr_redox_3 PF13738.6 gi|21227376|ref|NP_633298.1| - 0.031 13.5 0.0 0.042 13.1 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|21227376|ref|NP_633298.1| - 0.034 14.4 0.5 0.089 13.1 0.5 1.7 1 1 0 1 1 1 0 TrkA-N domain Ldh_1_N PF00056.23 gi|21227376|ref|NP_633298.1| - 0.053 13.6 0.1 0.1 12.7 0.1 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain PDH PF02153.17 gi|21227377|ref|NP_633299.1| - 3.4e-54 183.6 0.0 4.4e-54 183.2 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.15 gi|21227377|ref|NP_633299.1| - 1.3e-09 38.4 0.0 2.5e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|21227377|ref|NP_633299.1| - 4.1e-07 30.5 0.0 1.2e-06 29.0 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|21227377|ref|NP_633299.1| - 1.1e-06 28.2 0.1 2.7e-06 26.8 0.0 1.6 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|21227377|ref|NP_633299.1| - 0.012 15.6 1.8 0.42 10.6 1.8 2.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CoA_binding PF02629.19 gi|21227377|ref|NP_633299.1| - 0.022 15.4 0.2 0.11 13.2 0.1 2.2 2 0 0 2 2 2 0 CoA binding domain ApbA PF02558.16 gi|21227377|ref|NP_633299.1| - 0.034 13.8 0.1 0.18 11.5 0.1 2.1 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Epimerase PF01370.21 gi|21227377|ref|NP_633299.1| - 0.04 13.4 0.0 0.069 12.6 0.0 1.5 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family FDX-ACB PF03147.14 gi|21227377|ref|NP_633299.1| - 0.041 14.3 0.0 0.092 13.2 0.0 1.5 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain NAD_binding_7 PF13241.6 gi|21227377|ref|NP_633299.1| - 0.059 13.8 0.0 1.9 9.0 0.0 2.9 3 1 0 3 3 3 0 Putative NAD(P)-binding NmrA PF05368.13 gi|21227377|ref|NP_633299.1| - 0.12 11.9 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 NmrA-like family HEAT_2 PF13646.6 gi|21227378|ref|NP_633300.1| - 2e-47 159.5 4.4 7e-13 48.8 0.0 6.9 3 2 4 7 7 7 6 HEAT repeats HEAT_PBS PF03130.16 gi|21227378|ref|NP_633300.1| - 7.6e-39 128.4 1.0 0.0011 19.4 0.0 10.8 10 0 0 10 10 10 7 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|21227378|ref|NP_633300.1| - 2.8e-12 45.8 0.0 0.022 15.0 0.0 7.1 9 0 0 9 9 9 3 HEAT repeat HEAT_EZ PF13513.6 gi|21227378|ref|NP_633300.1| - 1.4e-07 31.9 6.1 0.01 16.3 0.1 6.7 7 1 0 7 7 7 1 HEAT-like repeat Vitellogenin_N PF01347.22 gi|21227378|ref|NP_633300.1| - 5.8e-07 28.3 0.0 0.0004 18.9 0.0 2.5 1 1 1 2 2 2 2 Lipoprotein amino terminal region Cnd1 PF12717.7 gi|21227378|ref|NP_633300.1| - 8e-05 22.7 0.1 0.65 10.0 0.0 4.5 3 1 1 4 4 4 1 non-SMC mitotic condensation complex subunit 1 Telomere_reg-2 PF10193.9 gi|21227378|ref|NP_633300.1| - 0.095 13.1 0.0 8.3 6.9 0.0 3.1 3 0 0 3 3 3 0 Telomere length regulation protein Arm PF00514.23 gi|21227378|ref|NP_633300.1| - 0.12 12.5 0.0 78 3.5 0.0 4.6 7 0 0 7 7 7 0 Armadillo/beta-catenin-like repeat ATP-synt_8 PF00895.20 gi|21227378|ref|NP_633300.1| - 0.33 11.4 1.5 0.7 10.4 1.5 1.5 1 0 0 1 1 1 0 ATP synthase protein 8 Methyltransf_11 PF08241.12 gi|21227379|ref|NP_633301.1| - 1.5e-25 89.7 0.0 2.8e-25 88.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21227379|ref|NP_633301.1| - 6.1e-24 84.6 0.0 9.8e-24 83.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227379|ref|NP_633301.1| - 4.7e-21 75.2 0.0 6.9e-21 74.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21227379|ref|NP_633301.1| - 2.9e-16 59.5 0.0 6.1e-16 58.5 0.0 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|21227379|ref|NP_633301.1| - 1.5e-14 54.1 0.0 1.8e-14 53.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21227379|ref|NP_633301.1| - 1.3e-13 51.6 0.0 2.1e-13 50.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|21227379|ref|NP_633301.1| - 2.8e-08 33.5 0.0 4.2e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|21227379|ref|NP_633301.1| - 2e-06 27.5 0.0 3.5e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.13 gi|21227379|ref|NP_633301.1| - 0.00014 21.4 0.0 0.00019 21.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.12 gi|21227379|ref|NP_633301.1| - 0.00049 19.3 0.0 0.00075 18.7 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase RrnaAD PF00398.20 gi|21227379|ref|NP_633301.1| - 0.00077 18.6 0.0 0.0011 18.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_2 PF00891.18 gi|21227379|ref|NP_633301.1| - 0.0013 18.1 0.0 0.0018 17.6 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_32 PF13679.6 gi|21227379|ref|NP_633301.1| - 0.0029 17.6 0.0 0.004 17.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21227379|ref|NP_633301.1| - 0.0048 16.7 0.0 0.013 15.3 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.12 gi|21227379|ref|NP_633301.1| - 0.005 16.4 0.0 0.022 14.4 0.0 1.8 1 1 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 gi|21227379|ref|NP_633301.1| - 0.011 15.7 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_9 PF08003.11 gi|21227379|ref|NP_633301.1| - 0.014 14.4 0.0 0.02 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_15 PF09445.10 gi|21227379|ref|NP_633301.1| - 0.022 14.3 0.0 0.031 13.9 0.0 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase UPF0020 PF01170.18 gi|21227379|ref|NP_633301.1| - 0.023 14.4 0.0 0.039 13.6 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 DUF5644 PF18712.1 gi|21227379|ref|NP_633301.1| - 0.055 13.5 0.0 0.099 12.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5644) GidB PF02527.15 gi|21227379|ref|NP_633301.1| - 0.069 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G TehB PF03848.14 gi|21227379|ref|NP_633301.1| - 0.079 12.4 0.0 0.15 11.4 0.0 1.4 1 0 0 1 1 1 0 Tellurite resistance protein TehB TIM PF00121.18 gi|21227380|ref|NP_633302.1| - 5.8e-12 45.5 0.0 8e-12 45.0 0.0 1.2 1 0 0 1 1 1 1 Triosephosphate isomerase ThiG PF05690.14 gi|21227380|ref|NP_633302.1| - 0.00011 21.7 0.3 0.00023 20.5 0.2 1.6 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|21227380|ref|NP_633302.1| - 0.003 17.0 0.7 0.0045 16.4 0.7 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|21227380|ref|NP_633302.1| - 0.024 13.6 1.3 0.03 13.3 0.3 1.6 2 0 0 2 2 2 0 FMN-dependent dehydrogenase Hydrolase_like PF13242.6 gi|21227380|ref|NP_633302.1| - 0.045 13.8 0.1 4.5 7.4 0.0 2.3 2 0 0 2 2 2 0 HAD-hyrolase-like His_biosynth PF00977.21 gi|21227380|ref|NP_633302.1| - 0.045 13.2 0.1 0.16 11.4 0.0 1.8 2 0 0 2 2 2 0 Histidine biosynthesis protein IGPS PF00218.21 gi|21227380|ref|NP_633302.1| - 0.048 12.8 0.0 0.094 11.9 0.0 1.6 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase Fae PF08714.11 gi|21227381|ref|NP_633303.1| - 4.9e-72 241.1 0.1 9.8e-72 240.1 0.1 1.5 1 0 0 1 1 1 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.24 gi|21227381|ref|NP_633303.1| - 2.8e-20 72.9 2.5 3.8e-19 69.2 2.5 2.3 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Ribul_P_3_epim PF00834.19 gi|21227381|ref|NP_633303.1| - 0.0026 17.2 3.0 0.0032 16.9 1.3 2.2 2 1 0 2 2 2 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 gi|21227381|ref|NP_633303.1| - 0.011 15.5 0.2 0.023 14.5 0.2 1.6 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain Cas_csx3 PF09620.10 gi|21227381|ref|NP_633303.1| - 0.067 13.1 0.1 12 5.8 0.1 2.8 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_csx3) HhH-GPD PF00730.25 gi|21227382|ref|NP_633304.1| - 1.9e-23 83.0 0.0 2.5e-23 82.6 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|21227382|ref|NP_633304.1| - 9e-11 41.1 0.0 9.1e-10 37.9 0.0 2.5 2 1 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|21227382|ref|NP_633304.1| - 0.00013 22.5 0.1 0.23 12.1 0.0 2.4 1 1 2 3 3 3 3 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.9 gi|21227382|ref|NP_633304.1| - 0.00042 20.6 4.1 0.00042 20.6 4.1 1.8 2 0 0 2 2 2 1 Iron-sulfur binding domain of endonuclease III HHH_2 PF12826.7 gi|21227382|ref|NP_633304.1| - 0.00055 20.0 0.0 0.38 10.9 0.0 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif Yip1 PF04893.17 gi|21227383|ref|NP_633305.1| - 2.8e-24 85.7 19.1 2.8e-24 85.7 19.1 1.3 1 1 0 1 1 1 1 Yip1 domain DUF1282 PF06930.12 gi|21227383|ref|NP_633305.1| - 0.0048 16.7 12.9 0.027 14.3 12.8 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) FeoB_associated PF12669.7 gi|21227383|ref|NP_633305.1| - 5.9 7.4 9.4 11 6.5 1.6 2.7 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein B12D PF06522.11 gi|21227383|ref|NP_633305.1| - 7.3 6.5 10.3 12 5.8 2.3 2.6 2 0 0 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Sdh5 PF03937.16 gi|21227384|ref|NP_633306.1| - 0.032 14.2 0.3 0.12 12.4 0.2 1.8 1 1 1 2 2 2 0 Flavinator of succinate dehydrogenase Ferritin PF00210.24 gi|21227385|ref|NP_633307.1| - 3e-37 127.7 2.6 3.4e-37 127.5 2.6 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|21227385|ref|NP_633307.1| - 2.5e-05 24.7 3.5 3.3e-05 24.3 3.5 1.2 1 0 0 1 1 1 1 Rubrerythrin DUF892 PF05974.12 gi|21227385|ref|NP_633307.1| - 0.0001 22.3 1.0 0.00015 21.8 0.1 1.7 2 1 0 1 1 1 1 Domain of unknown function (DUF892) INTS5_N PF14837.6 gi|21227385|ref|NP_633307.1| - 0.013 15.1 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Integrator complex subunit 5 N-terminus COQ7 PF03232.13 gi|21227385|ref|NP_633307.1| - 0.038 13.8 1.9 0.3 10.8 0.1 2.1 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 HMGL-like PF00682.19 gi|21227386|ref|NP_633308.1| - 2.7e-87 292.7 1.9 4.8e-87 291.9 1.9 1.4 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|21227386|ref|NP_633308.1| - 9.9e-36 122.6 1.2 2.6e-35 121.2 1.2 1.7 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain TatD_DNase PF01026.21 gi|21227387|ref|NP_633309.1| - 1.5e-65 221.2 0.0 1.7e-65 221.0 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.14 gi|21227387|ref|NP_633309.1| - 1.3e-06 28.4 0.2 2.7e-06 27.4 0.2 1.7 1 1 0 1 1 1 1 Amidohydrolase Lactamase_B PF00753.27 gi|21227388|ref|NP_633310.1| - 2.6e-25 89.6 0.1 3.3e-25 89.2 0.1 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|21227388|ref|NP_633310.1| - 7.6e-07 28.8 0.0 1.1e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|21227388|ref|NP_633310.1| - 0.005 16.3 0.1 0.0071 15.8 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain RMMBL PF07521.12 gi|21227388|ref|NP_633310.1| - 0.037 14.0 0.1 0.083 12.8 0.1 1.6 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain Radical_SAM_N PF08497.10 gi|21227389|ref|NP_633311.1| - 6.8e-127 422.8 0.0 9.2e-127 422.4 0.0 1.2 1 0 0 1 1 1 1 Radical SAM N-terminal DUF3362 PF11842.8 gi|21227389|ref|NP_633311.1| - 3.5e-31 108.6 0.2 3.5e-31 108.6 0.2 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF3362) Radical_SAM PF04055.21 gi|21227389|ref|NP_633311.1| - 4.4e-17 63.0 3.6 9.8e-17 61.8 0.3 2.8 4 0 0 4 4 4 1 Radical SAM superfamily B12-binding PF02310.19 gi|21227389|ref|NP_633311.1| - 9.3e-05 22.5 0.0 0.84 9.7 0.0 3.7 4 1 0 4 4 4 2 B12 binding domain CCG PF02754.16 gi|21227392|ref|NP_633314.1| - 4e-34 116.7 1.2 1e-15 57.7 0.1 2.7 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|21227392|ref|NP_633314.1| - 3.1e-10 40.4 3.1 3.1e-10 40.4 3.1 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21227392|ref|NP_633314.1| - 1e-09 38.8 3.4 1e-09 38.8 3.4 3.1 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227392|ref|NP_633314.1| - 8.1e-08 32.7 5.9 8.1e-08 32.7 5.9 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21227392|ref|NP_633314.1| - 9.5e-07 28.8 8.2 9.5e-07 28.8 8.2 2.9 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227392|ref|NP_633314.1| - 1.2e-06 28.6 18.3 7.2e-06 26.1 9.2 3.3 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227392|ref|NP_633314.1| - 7.4e-06 26.8 12.7 0.0078 17.1 0.2 3.5 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|21227392|ref|NP_633314.1| - 0.00026 20.9 2.6 0.00026 20.9 2.6 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21227392|ref|NP_633314.1| - 0.00041 20.5 10.4 0.062 13.5 1.8 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21227392|ref|NP_633314.1| - 0.00084 19.1 24.6 0.0031 17.3 3.7 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain UPF0004 PF00919.20 gi|21227392|ref|NP_633314.1| - 0.0018 18.3 0.0 1.4 9.0 0.0 3.1 2 1 1 3 3 3 2 Uncharacterized protein family UPF0004 Fer4_4 PF12800.7 gi|21227392|ref|NP_633314.1| - 0.005 17.3 2.2 0.005 17.3 2.2 4.0 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21227392|ref|NP_633314.1| - 0.0073 16.4 15.9 0.013 15.7 0.9 3.6 4 0 0 4 4 4 2 4Fe-4S dicluster domain Tetraspanin PF00335.20 gi|21227392|ref|NP_633314.1| - 0.089 12.5 0.1 10 5.8 0.1 2.4 2 0 0 2 2 2 0 Tetraspanin family Eapp_C PF10238.9 gi|21227392|ref|NP_633314.1| - 1 9.5 6.0 0.3 11.1 1.4 2.4 3 0 0 3 3 3 0 E2F-associated phosphoprotein FAD-oxidase_C PF02913.19 gi|21227393|ref|NP_633315.1| - 5.1e-58 196.6 0.0 6.5e-58 196.3 0.0 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|21227393|ref|NP_633315.1| - 5.1e-46 155.9 0.1 9e-46 155.1 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain DUF5591 PF17884.1 gi|21227394|ref|NP_633316.1| - 1.8e-61 206.5 0.2 5.9e-61 204.8 0.1 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF5591) TGT PF01702.18 gi|21227394|ref|NP_633316.1| - 8.1e-17 61.4 0.0 8.1e-16 58.1 0.0 2.3 3 0 0 3 3 3 1 Queuine tRNA-ribosyltransferase PUA PF01472.20 gi|21227394|ref|NP_633316.1| - 9.8e-13 47.9 0.3 2.1e-12 46.8 0.3 1.5 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.6 gi|21227394|ref|NP_633316.1| - 9.1e-11 41.7 0.0 2e-10 40.6 0.0 1.6 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase Acetyltransf_1 PF00583.25 gi|21227395|ref|NP_633317.1| - 1.4e-19 70.5 0.5 1.9e-19 70.0 0.5 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|21227395|ref|NP_633317.1| - 1.5e-16 60.5 0.4 2.1e-16 60.0 0.4 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|21227395|ref|NP_633317.1| - 9.8e-15 54.8 1.5 1.3e-14 54.3 1.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21227395|ref|NP_633317.1| - 2.2e-09 37.2 0.1 3.3e-09 36.6 0.1 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|21227395|ref|NP_633317.1| - 2.7e-09 37.8 0.2 4.3e-09 37.2 0.2 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|21227395|ref|NP_633317.1| - 9.8e-08 32.3 0.3 1.9e-07 31.3 0.3 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|21227395|ref|NP_633317.1| - 1.2e-07 31.8 0.1 2.2e-06 27.8 0.1 2.3 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21227395|ref|NP_633317.1| - 2.4e-05 24.3 0.1 4.3e-05 23.6 0.1 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase GNAT_acetyltran PF12746.7 gi|21227395|ref|NP_633317.1| - 0.0029 17.2 0.1 0.0033 17.0 0.1 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_8 PF13523.6 gi|21227395|ref|NP_633317.1| - 0.0039 16.9 0.0 0.0099 15.6 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|21227395|ref|NP_633317.1| - 0.03 14.5 0.0 0.048 13.8 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|21227395|ref|NP_633317.1| - 0.036 13.5 0.0 0.067 12.7 0.0 1.6 1 1 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_18 PF18014.1 gi|21227395|ref|NP_633317.1| - 0.11 12.4 0.0 13 5.7 0.0 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain UPF0058 PF01893.16 gi|21227396|ref|NP_633318.1| - 2.7e-30 104.5 1.2 3e-30 104.3 1.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 TRP_2 PF08344.11 gi|21227396|ref|NP_633318.1| - 0.15 12.3 0.0 0.35 11.1 0.0 1.7 2 1 0 2 2 2 0 Transient receptor ion channel II Toprim_4 PF13662.6 gi|21227397|ref|NP_633319.1| - 1.9e-11 44.3 0.1 6.3e-11 42.6 0.1 2.0 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|21227397|ref|NP_633319.1| - 7.3e-05 23.1 0.0 0.00019 21.8 0.0 1.7 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|21227397|ref|NP_633319.1| - 0.059 13.6 0.1 0.23 11.7 0.1 2.1 1 1 0 1 1 1 0 Toprim domain Pyr_redox_2 PF07992.14 gi|21227398|ref|NP_633320.1| - 9.8e-48 162.9 0.1 1.2e-47 162.5 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|21227398|ref|NP_633320.1| - 6.4e-21 74.7 8.8 1.9e-17 63.6 0.1 3.9 2 1 2 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|21227398|ref|NP_633320.1| - 1.9e-13 50.3 0.0 4.3e-09 36.1 0.0 2.5 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|21227398|ref|NP_633320.1| - 3e-12 46.8 0.0 7.6e-12 45.5 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DAO PF01266.24 gi|21227398|ref|NP_633320.1| - 3.6e-10 39.9 2.3 0.0092 15.6 1.7 4.0 3 1 1 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|21227398|ref|NP_633320.1| - 5.1e-09 36.2 0.2 0.0019 18.4 0.0 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|21227398|ref|NP_633320.1| - 7.4e-09 35.2 0.5 0.009 15.1 0.0 3.2 3 0 0 3 3 3 3 FAD binding domain HI0933_like PF03486.14 gi|21227398|ref|NP_633320.1| - 2.6e-08 33.0 0.1 0.078 11.7 0.0 3.6 4 0 0 4 4 4 3 HI0933-like protein GIDA PF01134.22 gi|21227398|ref|NP_633320.1| - 7.3e-07 28.6 0.1 0.00044 19.5 0.0 3.1 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|21227398|ref|NP_633320.1| - 5.1e-06 26.0 0.3 0.0014 17.9 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_7 PF13241.6 gi|21227398|ref|NP_633320.1| - 5.4e-05 23.6 0.1 0.12 12.8 0.0 2.4 2 0 0 2 2 2 2 Putative NAD(P)-binding Thi4 PF01946.17 gi|21227398|ref|NP_633320.1| - 0.00011 21.5 0.1 0.087 12.0 0.0 2.5 2 0 0 2 2 2 2 Thi4 family NAD_binding_9 PF13454.6 gi|21227398|ref|NP_633320.1| - 0.00041 20.4 0.8 6.9 6.6 0.0 4.0 3 1 1 4 4 4 0 FAD-NAD(P)-binding K_oxygenase PF13434.6 gi|21227398|ref|NP_633320.1| - 0.0012 18.1 0.0 0.026 13.7 0.0 2.3 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) ApbA PF02558.16 gi|21227398|ref|NP_633320.1| - 0.0019 17.8 0.1 0.047 13.3 0.0 2.3 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Trp_halogenase PF04820.14 gi|21227398|ref|NP_633320.1| - 0.0023 16.8 0.3 0.24 10.2 0.0 2.2 2 0 0 2 2 2 1 Tryptophan halogenase 3HCDH_N PF02737.18 gi|21227398|ref|NP_633320.1| - 0.0027 17.6 0.0 0.034 14.0 0.0 2.4 3 0 0 3 3 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|21227398|ref|NP_633320.1| - 0.0032 16.8 0.0 1.1 8.6 0.0 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|21227398|ref|NP_633320.1| - 0.0044 17.3 0.6 0.1 12.9 0.0 2.3 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|21227398|ref|NP_633320.1| - 0.0086 15.4 1.1 3.3 7.0 0.3 2.5 2 1 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|21227398|ref|NP_633320.1| - 0.011 15.9 0.1 1.7 9.0 0.0 2.4 2 0 0 2 2 2 0 TrkA-N domain Shikimate_DH PF01488.20 gi|21227398|ref|NP_633320.1| - 0.018 15.1 0.0 2.5 8.1 0.0 2.4 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Lycopene_cycl PF05834.12 gi|21227398|ref|NP_633320.1| - 0.025 13.6 0.1 5.3 6.0 0.0 2.3 2 0 0 2 2 2 0 Lycopene cyclase protein NAD_Gly3P_dh_N PF01210.23 gi|21227398|ref|NP_633320.1| - 0.044 13.8 0.1 7.3 6.5 0.0 2.5 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_oxidored PF12831.7 gi|21227398|ref|NP_633320.1| - 0.072 12.4 3.2 0.49 9.7 0.2 2.3 2 0 0 2 2 2 0 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|21227398|ref|NP_633320.1| - 0.079 12.5 0.8 0.64 9.6 0.1 2.2 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RTC PF01137.21 gi|21227399|ref|NP_633321.1| - 1e-84 283.2 0.0 1.1e-84 283.0 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|21227399|ref|NP_633321.1| - 1.2e-14 54.7 0.1 2.3e-14 53.8 0.1 1.5 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain Trm5_N PF18093.1 gi|21227399|ref|NP_633321.1| - 0.13 12.2 0.0 24 4.9 0.0 3.0 3 0 0 3 3 3 0 tRNA methyltransferase 5 N-terminal domain PTS_2-RNA PF01885.16 gi|21227400|ref|NP_633322.1| - 1.1e-21 77.7 0.0 1.4e-21 77.4 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Phlebovirus_G1 PF07243.11 gi|21227400|ref|NP_633322.1| - 0.0043 15.5 0.0 0.0053 15.2 0.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 tRNA_anti-codon PF01336.25 gi|21227401|ref|NP_633323.1| - 6.7e-31 106.1 12.3 4.4e-07 29.8 0.1 4.4 4 0 0 4 4 4 4 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 gi|21227401|ref|NP_633323.1| - 1.9e-20 73.6 4.4 0.00018 21.3 0.1 4.1 4 0 0 4 4 4 4 Cell division control protein 24, OB domain 3 REPA_OB_2 PF16900.5 gi|21227401|ref|NP_633323.1| - 8.9e-13 48.0 6.3 0.0085 16.0 0.0 4.4 4 0 0 4 4 4 4 Replication protein A OB domain DUF3127 PF11325.8 gi|21227401|ref|NP_633323.1| - 3.5e-05 23.9 6.0 0.64 10.3 0.1 4.9 4 1 0 4 4 4 2 Domain of unknown function (DUF3127) Rep_fac-A_C PF08646.10 gi|21227401|ref|NP_633323.1| - 0.00076 19.3 1.3 22 4.8 0.0 4.1 4 0 0 4 4 4 1 Replication factor-A C terminal domain tRNA_anti_2 PF13742.6 gi|21227401|ref|NP_633323.1| - 0.0071 16.5 0.2 32 4.8 0.0 3.9 4 0 0 4 4 4 0 OB-fold nucleic acid binding domain RecG_wedge PF17191.4 gi|21227401|ref|NP_633323.1| - 0.036 13.7 5.8 0.15 11.6 0.2 3.6 3 2 1 4 4 4 0 RecG wedge domain T2SS-T3SS_pil_N PF13629.6 gi|21227401|ref|NP_633323.1| - 3.5 7.4 5.8 28 4.5 0.0 3.9 5 0 0 5 5 5 0 Pilus formation protein N terminal region DUF4277 PF14104.6 gi|21227402|ref|NP_633324.1| - 2.4e-38 130.8 0.0 5.2e-38 129.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|21227402|ref|NP_633324.1| - 2.4e-11 43.7 0.3 1.5e-10 41.1 0.3 2.0 1 1 0 1 1 1 1 Transposase DDE domain ArgoMid PF16487.5 gi|21227402|ref|NP_633324.1| - 0.13 12.5 0.2 7.5 6.9 0.0 2.9 3 0 0 3 3 3 0 Mid domain of argonaute CBS PF00571.28 gi|21227403|ref|NP_633325.1| - 1.8e-21 76.3 6.7 9.4e-13 48.4 0.4 2.3 2 0 0 2 2 2 2 CBS domain CBS PF00571.28 gi|21227404|ref|NP_633326.1| - 6.2e-44 148.3 11.0 4.2e-12 46.3 0.1 4.1 4 0 0 4 4 4 4 CBS domain IF3_N PF05198.16 gi|21227404|ref|NP_633326.1| - 4.5 7.6 7.1 7.1 7.0 0.1 3.9 4 1 0 4 4 4 0 Translation initiation factor IF-3, N-terminal domain CBS PF00571.28 gi|21227405|ref|NP_633327.1| - 1.5e-48 163.0 4.6 4.6e-13 49.4 0.1 4.2 4 0 0 4 4 4 4 CBS domain Tis11B_N PF04553.12 gi|21227405|ref|NP_633327.1| - 0.021 15.4 0.1 0.061 13.9 0.0 1.8 2 0 0 2 2 2 0 Tis11B like protein, N terminus TMEM237 PF15383.6 gi|21227405|ref|NP_633327.1| - 0.032 13.3 0.3 0.069 12.2 0.3 1.6 1 1 0 1 1 1 0 Transmembrane protein 237 CBS PF00571.28 gi|21227406|ref|NP_633328.1| - 1.4e-48 163.1 18.5 1e-14 54.7 0.6 4.1 4 0 0 4 4 4 4 CBS domain CBS PF00571.28 gi|21227407|ref|NP_633329.1| - 1.3e-42 144.0 10.1 3.9e-13 49.6 0.2 4.1 4 0 0 4 4 4 4 CBS domain Ribosomal_S7 PF00177.21 gi|21227407|ref|NP_633329.1| - 0.18 11.5 0.5 1 9.0 0.1 2.3 2 1 0 2 2 2 0 Ribosomal protein S7p/S5e AIM24 PF01987.17 gi|21227408|ref|NP_633330.1| - 3.6e-64 216.3 0.2 4.2e-64 216.1 0.2 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Lig_C PF18330.1 gi|21227409|ref|NP_633331.1| - 5.1e-48 162.2 0.3 1.3e-47 160.9 0.2 1.8 2 0 0 2 2 2 1 Ligase Pab1020 C-terminal region RNA_ligase PF09414.10 gi|21227409|ref|NP_633331.1| - 3e-19 69.9 0.1 4.8e-19 69.2 0.1 1.3 1 0 0 1 1 1 1 RNA ligase DNA_ligase_A_M PF01068.21 gi|21227409|ref|NP_633331.1| - 1.7e-08 34.3 0.1 3e-06 27.0 0.1 2.4 1 1 0 1 1 1 1 ATP dependent DNA ligase domain TusA PF01206.17 gi|21227409|ref|NP_633331.1| - 0.0093 15.8 0.0 0.91 9.4 0.0 2.9 2 0 0 2 2 2 1 Sulfurtransferase TusA DDE_Tnp_1_6 PF13751.6 gi|21227410|ref|NP_633332.1| - 4.9e-29 101.1 1.8 3e-28 98.6 1.4 2.3 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 gi|21227410|ref|NP_633332.1| - 2.6e-19 69.7 1.7 8e-19 68.1 1.7 1.9 1 1 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.11 gi|21227410|ref|NP_633332.1| - 3e-16 59.2 0.0 1.1e-15 57.3 0.0 2.0 2 0 0 2 2 2 1 Transposase domain (DUF772) DDE_Tnp_1_2 PF13586.6 gi|21227410|ref|NP_633332.1| - 0.014 15.7 0.0 1.6 9.1 0.0 2.9 2 0 0 2 2 2 0 Transposase DDE domain RE_XamI PF09572.10 gi|21227410|ref|NP_633332.1| - 0.03 14.0 0.1 0.14 11.8 0.0 2.1 2 1 0 2 2 2 0 XamI restriction endonuclease F420_oxidored PF03807.17 gi|21227411|ref|NP_633333.1| - 0.028 15.0 0.0 0.092 13.3 0.0 1.9 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent GGACT PF06094.12 gi|21227412|ref|NP_633334.1| - 8.7e-14 52.2 0.2 1.2e-13 51.8 0.2 1.2 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like DUF1947 PF09183.10 gi|21227412|ref|NP_633334.1| - 0.044 14.1 0.2 13 6.2 0.8 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1947) AP_endonuc_2 PF01261.24 gi|21227413|ref|NP_633335.1| - 1.4e-32 112.8 0.0 1.8e-32 112.5 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel RNA_binding PF01877.17 gi|21227414|ref|NP_633336.1| - 1.1e-16 61.1 0.0 1.5e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 RNA binding Aldo_ket_red PF00248.21 gi|21227414|ref|NP_633336.1| - 0.21 10.7 0.0 0.27 10.4 0.0 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family AAA_17 PF13207.6 gi|161485677|ref|NP_633337.2| - 2.8e-16 60.2 0.2 4.2e-16 59.6 0.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|161485677|ref|NP_633337.2| - 4.6e-12 46.6 0.0 6.7e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|161485677|ref|NP_633337.2| - 2.1e-05 24.7 0.0 2.9e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain ADK PF00406.22 gi|161485677|ref|NP_633337.2| - 0.006 16.7 0.1 0.0079 16.3 0.1 1.3 1 1 0 1 1 1 1 Adenylate kinase Zeta_toxin PF06414.12 gi|161485677|ref|NP_633337.2| - 0.091 12.0 0.0 0.15 11.3 0.0 1.2 1 1 0 1 1 1 0 Zeta toxin KTI12 PF08433.10 gi|161485677|ref|NP_633337.2| - 0.1 12.0 0.0 0.27 10.7 0.0 1.9 1 1 0 1 1 1 0 Chromatin associated protein KTI12 PEP-utilizers PF00391.23 gi|161485677|ref|NP_633337.2| - 0.17 11.6 1.2 0.43 10.3 1.2 1.7 1 1 0 1 1 1 0 PEP-utilising enzyme, mobile domain Cdc6_C PF09079.11 gi|21227416|ref|NP_633338.1| - 2.3e-23 81.9 0.4 5.5e-23 80.7 0.4 1.7 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|21227416|ref|NP_633338.1| - 7.4e-12 45.7 0.1 3.2e-11 43.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|21227416|ref|NP_633338.1| - 2.4e-09 37.8 0.4 5.6e-08 33.3 0.1 2.5 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|21227416|ref|NP_633338.1| - 3e-09 37.4 0.0 7.7e-09 36.1 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|21227416|ref|NP_633338.1| - 2.7e-08 33.4 0.7 1.4e-06 27.8 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|21227416|ref|NP_633338.1| - 1.1e-06 28.7 1.3 3.8e-06 27.0 1.3 1.8 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea DEAD PF00270.29 gi|21227416|ref|NP_633338.1| - 0.0001 22.1 0.5 0.98 9.2 0.0 3.2 3 0 0 3 3 3 2 DEAD/DEAH box helicase KAP_NTPase PF07693.14 gi|21227416|ref|NP_633338.1| - 0.00012 21.5 1.0 0.033 13.5 0.0 2.2 1 1 1 2 2 2 2 KAP family P-loop domain NACHT PF05729.12 gi|21227416|ref|NP_633338.1| - 0.00023 21.1 0.0 0.0005 20.0 0.0 1.6 1 0 0 1 1 1 1 NACHT domain Sigma54_activat PF00158.26 gi|21227416|ref|NP_633338.1| - 0.00052 19.8 0.0 0.0011 18.6 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|21227416|ref|NP_633338.1| - 0.0009 19.0 0.2 0.05 13.3 0.0 2.7 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 gi|21227416|ref|NP_633338.1| - 0.00095 18.4 0.2 0.0061 15.7 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 gi|21227416|ref|NP_633338.1| - 0.0016 19.0 0.0 0.0041 17.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 gi|21227416|ref|NP_633338.1| - 0.012 15.6 0.1 0.038 14.0 0.0 1.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Bac_DnaA PF00308.18 gi|21227416|ref|NP_633338.1| - 0.013 15.4 0.4 0.095 12.5 0.4 2.1 1 1 0 1 1 1 0 Bacterial dnaA protein DUF2075 PF09848.9 gi|21227416|ref|NP_633338.1| - 0.014 14.7 0.0 0.02 14.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_2 PF07724.14 gi|21227416|ref|NP_633338.1| - 0.02 15.0 0.8 0.12 12.5 0.8 2.1 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 gi|21227416|ref|NP_633338.1| - 0.023 14.2 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Zeta_toxin PF06414.12 gi|21227416|ref|NP_633338.1| - 0.055 12.7 0.7 0.18 11.1 0.0 2.1 3 0 0 3 3 3 0 Zeta toxin RNA_helicase PF00910.22 gi|21227416|ref|NP_633338.1| - 0.064 13.7 0.0 0.15 12.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase DUF1202 PF06717.11 gi|21227416|ref|NP_633338.1| - 0.1 12.0 0.0 0.6 9.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1202) AAA_19 PF13245.6 gi|21227416|ref|NP_633338.1| - 0.12 12.7 0.2 0.28 11.5 0.2 1.7 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|21227416|ref|NP_633338.1| - 0.13 12.0 0.3 0.79 9.4 0.0 2.2 2 1 0 2 2 2 0 IstB-like ATP binding protein AAA_5 PF07728.14 gi|21227416|ref|NP_633338.1| - 0.15 12.1 0.5 0.73 9.8 0.5 2.3 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) ResIII PF04851.15 gi|21227416|ref|NP_633338.1| - 0.15 12.1 0.1 0.34 10.9 0.1 1.5 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit FtsK_SpoIIIE PF01580.18 gi|21227416|ref|NP_633338.1| - 0.25 10.7 1.3 0.8 9.0 0.0 2.3 3 0 0 3 3 3 0 FtsK/SpoIIIE family SSF PF00474.17 gi|21227417|ref|NP_633339.1| - 7e-07 28.4 0.1 7e-07 28.4 0.1 1.5 2 0 0 2 2 2 1 Sodium:solute symporter family SSF PF00474.17 gi|21227418|ref|NP_633340.1| - 4.4e-87 292.6 23.8 5.7e-87 292.2 23.8 1.1 1 0 0 1 1 1 1 Sodium:solute symporter family Pyridoxal_deC PF00282.19 gi|21227419|ref|NP_633341.1| - 5.2e-32 111.0 0.0 7.7e-32 110.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|21227419|ref|NP_633341.1| - 1.6e-08 33.9 0.1 4.4e-08 32.5 0.1 1.8 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|21227419|ref|NP_633341.1| - 1.2e-07 31.3 0.0 1.5e-06 27.7 0.0 2.1 1 1 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|21227419|ref|NP_633341.1| - 0.14 11.4 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family CBS PF00571.28 gi|21227420|ref|NP_633342.1| - 2.1e-27 95.3 5.3 5.5e-13 49.1 0.1 2.3 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.22 gi|21227420|ref|NP_633342.1| - 1.1e-13 51.1 6.1 9.5e-08 31.6 0.2 3.3 1 1 2 3 3 3 2 Peptidase family M50 Peptidase_M50B PF13398.6 gi|21227420|ref|NP_633342.1| - 0.00033 20.3 0.4 0.00033 20.3 0.4 2.1 1 1 0 2 2 2 1 Peptidase M50B-like TraB PF01963.17 gi|21227421|ref|NP_633343.1| - 1.6e-32 113.4 0.0 2.4e-32 112.9 0.0 1.2 1 0 0 1 1 1 1 TraB family ABC2_membrane_3 PF12698.7 gi|21227421|ref|NP_633343.1| - 0.19 10.8 8.6 0.36 9.9 8.6 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4405 PF14358.6 gi|21227422|ref|NP_633344.1| - 1.6e-07 31.7 6.4 2e-07 31.4 6.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4405) Ferric_reduct PF01794.19 gi|21227422|ref|NP_633344.1| - 3.2e-05 24.1 0.1 3.2e-05 24.0 0.1 1.1 1 0 0 1 1 1 1 Ferric reductase like transmembrane component PspB PF06667.12 gi|21227422|ref|NP_633344.1| - 0.41 10.7 5.8 0.89 9.7 0.5 2.2 1 1 1 2 2 2 0 Phage shock protein B FTR_C PF02741.15 gi|21227423|ref|NP_633345.1| - 2.2e-67 225.7 3.0 3.4e-67 225.1 3.0 1.3 1 0 0 1 1 1 1 FTR, proximal lobe FTR PF01913.18 gi|21227423|ref|NP_633345.1| - 9.8e-65 216.8 1.6 1.5e-64 216.2 0.1 2.0 2 1 0 2 2 2 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase GPAT_N PF14829.6 gi|21227423|ref|NP_633345.1| - 0.043 13.8 0.0 0.083 12.9 0.0 1.5 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase N-terminal PAS_4 PF08448.10 gi|21227423|ref|NP_633345.1| - 0.064 13.5 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 PAS fold CheD PF03975.13 gi|21227424|ref|NP_633346.1| - 1.8e-31 108.4 0.1 2.4e-31 108.0 0.1 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.12 gi|21227425|ref|NP_633347.1| - 4.3e-09 36.1 0.4 0.00099 19.0 0.2 2.5 2 0 0 2 2 2 2 CheC-like family CheX PF13690.6 gi|21227425|ref|NP_633347.1| - 0.0019 18.3 0.2 0.021 15.0 0.0 2.2 2 0 0 2 2 2 1 Chemotaxis phosphatase CheX CheR PF01739.18 gi|21227426|ref|NP_633348.1| - 4.3e-57 192.8 0.2 6.7e-57 192.1 0.2 1.3 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.15 gi|21227426|ref|NP_633348.1| - 3.4e-13 49.1 0.3 7.3e-13 48.0 0.3 1.6 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_31 PF13847.6 gi|21227426|ref|NP_633348.1| - 4.6e-06 26.5 0.1 0.074 12.9 0.1 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21227426|ref|NP_633348.1| - 2.7e-05 24.8 0.1 9.2e-05 23.1 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21227426|ref|NP_633348.1| - 8.6e-05 23.2 0.1 0.11 13.2 0.1 3.3 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21227426|ref|NP_633348.1| - 0.0028 17.5 0.0 0.0042 16.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21227426|ref|NP_633348.1| - 0.022 15.4 0.1 0.64 10.7 0.1 2.6 1 1 0 1 1 1 0 Methyltransferase domain NodS PF05401.11 gi|21227426|ref|NP_633348.1| - 0.13 11.9 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 Nodulation protein S (NodS) CheW PF01584.19 gi|21227427|ref|NP_633349.1| - 3.6e-24 85.0 0.9 7.3e-24 84.0 0.6 1.7 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.26 gi|21227427|ref|NP_633349.1| - 8.2e-20 71.4 0.2 1.8e-19 70.3 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Hpt PF01627.23 gi|21227427|ref|NP_633349.1| - 1.3e-16 60.6 0.1 4.1e-16 59.0 0.1 2.0 1 0 0 1 1 1 1 Hpt domain H-kinase_dim PF02895.14 gi|21227427|ref|NP_633349.1| - 4e-12 46.4 1.4 4e-12 46.4 1.4 2.6 2 0 0 2 2 2 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.6 gi|21227427|ref|NP_633349.1| - 4.8e-05 23.2 0.0 0.00019 21.3 0.0 2.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF966 PF06136.13 gi|21227427|ref|NP_633349.1| - 1.6 8.4 30.6 2.6 7.7 30.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Borrelia_P83 PF05262.11 gi|21227427|ref|NP_633349.1| - 4.3 5.7 30.5 6 5.2 30.5 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein CheB_methylest PF01339.17 gi|21227428|ref|NP_633350.1| - 7e-62 208.1 0.0 1.6e-60 203.7 0.0 2.3 2 0 0 2 2 2 1 CheB methylesterase Response_reg PF00072.24 gi|21227428|ref|NP_633350.1| - 2.5e-22 79.1 0.8 7.6e-22 77.6 0.4 2.0 2 0 0 2 2 2 1 Response regulator receiver domain Eno-Rase_NADH_b PF12242.8 gi|21227428|ref|NP_633350.1| - 0.0058 16.4 0.1 0.014 15.2 0.1 1.6 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Response_reg PF00072.24 gi|21227429|ref|NP_633351.1| - 1e-27 96.5 2.0 1.2e-27 96.3 2.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Peptidase_M29 PF02073.15 gi|21227429|ref|NP_633351.1| - 0.078 11.7 0.1 8.6 5.0 0.0 2.0 1 1 0 2 2 2 0 Thermophilic metalloprotease (M29) Response_reg PF00072.24 gi|21227430|ref|NP_633352.1| - 3.6e-23 81.9 0.0 4e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain MCPsignal PF00015.21 gi|21227431|ref|NP_633353.1| - 2.1e-48 164.4 19.6 2.1e-48 164.4 19.6 5.3 4 3 2 6 6 6 3 Methyl-accepting chemotaxis protein (MCP) signalling domain HAMP PF00672.25 gi|21227431|ref|NP_633353.1| - 1.2e-10 41.6 2.1 1.3e-08 35.1 0.0 4.8 4 2 0 4 4 4 1 HAMP domain DUF948 PF06103.11 gi|21227431|ref|NP_633353.1| - 0.0043 17.3 28.7 0.63 10.3 1.6 6.1 3 2 2 5 5 5 3 Bacterial protein of unknown function (DUF948) cwf21 PF08312.12 gi|21227431|ref|NP_633353.1| - 0.043 14.0 2.6 1.6 9.0 0.0 3.8 3 0 0 3 3 3 0 cwf21 domain DUF2675 PF11247.8 gi|21227431|ref|NP_633353.1| - 0.049 13.8 0.1 1.6 8.9 0.1 3.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2675) Baculo_11_kDa PF06143.11 gi|21227431|ref|NP_633353.1| - 0.12 12.0 1.6 0.31 10.6 0.1 2.5 2 0 0 2 2 2 0 Baculovirus 11 kDa family T7SS_ESX_EspC PF10824.8 gi|21227431|ref|NP_633353.1| - 0.93 10.0 0.0 0.93 10.0 0.0 4.6 4 1 0 4 4 4 0 Excreted virulence factor EspC, type VII ESX diderm DUF3450 PF11932.8 gi|21227431|ref|NP_633353.1| - 2.2 7.5 19.2 0.2 10.9 5.8 3.6 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) DUF1664 PF07889.12 gi|21227431|ref|NP_633353.1| - 4.9 7.2 30.2 0.59 10.2 3.1 5.1 3 2 3 6 6 6 0 Protein of unknown function (DUF1664) CheW PF01584.19 gi|21227432|ref|NP_633354.1| - 1.2e-34 118.9 0.3 1.5e-34 118.6 0.3 1.1 1 0 0 1 1 1 1 CheW-like domain Herpes_pp85 PF04637.12 gi|21227432|ref|NP_633354.1| - 0.13 10.7 6.1 0.15 10.4 6.1 1.2 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) GntP_permease PF02447.16 gi|21227433|ref|NP_633355.1| - 5.3e-66 223.1 19.5 7.5e-66 222.6 19.5 1.1 1 0 0 1 1 1 1 GntP family permease Fe_dep_repr_C PF02742.15 gi|21227434|ref|NP_633356.1| - 8.8e-16 57.8 0.0 1.3e-15 57.2 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|21227434|ref|NP_633356.1| - 1.6e-13 50.6 0.0 2.4e-13 50.0 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 gi|21227434|ref|NP_633356.1| - 2.4e-05 24.1 0.0 5.8e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|21227434|ref|NP_633356.1| - 0.00035 20.4 0.0 0.00084 19.2 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 gi|21227434|ref|NP_633356.1| - 0.00049 20.0 0.0 0.0024 17.8 0.0 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_27 PF13463.6 gi|21227434|ref|NP_633356.1| - 0.00079 19.9 0.0 0.0011 19.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|21227434|ref|NP_633356.1| - 0.0025 17.7 0.0 0.0084 16.0 0.0 1.9 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|21227434|ref|NP_633356.1| - 0.0027 17.7 0.0 0.087 12.9 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|21227434|ref|NP_633356.1| - 0.0043 16.8 0.0 0.4 10.5 0.0 2.2 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain Rrf2 PF02082.20 gi|21227434|ref|NP_633356.1| - 0.008 16.5 0.0 0.015 15.7 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.10 gi|21227434|ref|NP_633356.1| - 0.049 13.4 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|21227434|ref|NP_633356.1| - 0.05 13.5 0.0 0.21 11.5 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_36 PF13730.6 gi|21227434|ref|NP_633356.1| - 0.087 12.8 0.2 0.38 10.8 0.0 2.1 2 1 0 2 2 2 0 Helix-turn-helix domain Topoisom_bac PF01131.20 gi|21227434|ref|NP_633356.1| - 0.091 11.8 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase HTH_23 PF13384.6 gi|21227434|ref|NP_633356.1| - 0.18 11.6 0.0 11 6.0 0.0 2.4 3 0 0 3 3 3 0 Homeodomain-like domain ZnuA PF01297.17 gi|21227435|ref|NP_633357.1| - 4.4e-66 222.9 0.2 5.2e-66 222.7 0.2 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Aminotran_MocR PF12897.7 gi|21227435|ref|NP_633357.1| - 0.022 13.5 0.0 0.035 12.9 0.0 1.3 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Glyco_tran_WecB PF03808.13 gi|21227435|ref|NP_633357.1| - 0.052 13.5 0.0 0.12 12.4 0.0 1.6 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family FtsH_ext PF06480.15 gi|21227435|ref|NP_633357.1| - 0.086 13.2 0.2 0.51 10.7 0.1 2.2 2 1 0 2 2 2 0 FtsH Extracellular ABC_tran PF00005.27 gi|21227436|ref|NP_633358.1| - 3.1e-29 102.2 0.0 4.5e-29 101.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21227436|ref|NP_633358.1| - 9.5e-17 61.7 1.4 1.3e-09 38.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21227436|ref|NP_633358.1| - 8.5e-08 31.9 0.0 2e-07 30.7 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|21227436|ref|NP_633358.1| - 2.5e-06 27.5 0.1 0.012 15.3 0.0 2.2 1 1 1 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|21227436|ref|NP_633358.1| - 0.0015 19.0 1.8 0.0025 18.3 1.8 1.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|21227436|ref|NP_633358.1| - 0.0029 17.9 0.1 0.0084 16.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 gi|21227436|ref|NP_633358.1| - 0.004 17.4 0.0 0.16 12.2 0.0 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA PF00004.29 gi|21227436|ref|NP_633358.1| - 0.0045 17.4 1.2 0.052 14.0 1.2 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|21227436|ref|NP_633358.1| - 0.015 15.2 0.0 0.036 14.0 0.0 1.6 1 1 1 2 2 2 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|21227436|ref|NP_633358.1| - 0.024 14.4 0.1 0.048 13.4 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|21227436|ref|NP_633358.1| - 0.032 13.9 0.0 0.082 12.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|21227436|ref|NP_633358.1| - 0.063 13.7 0.0 0.13 12.7 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain T2SSE PF00437.20 gi|21227436|ref|NP_633358.1| - 0.087 11.9 0.0 0.16 11.0 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein ABC_ATPase PF09818.9 gi|21227436|ref|NP_633358.1| - 0.12 11.1 0.8 10 4.8 1.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_19 PF13245.6 gi|21227436|ref|NP_633358.1| - 0.12 12.7 0.3 1.2 9.5 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|21227436|ref|NP_633358.1| - 0.15 12.1 0.4 4 7.4 0.2 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) MobB PF03205.14 gi|21227436|ref|NP_633358.1| - 0.19 11.6 0.2 0.39 10.6 0.2 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ABC-3 PF00950.17 gi|21227437|ref|NP_633359.1| - 2.8e-82 276.1 28.1 3.3e-82 275.8 28.1 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|21227437|ref|NP_633359.1| - 8.8e-09 34.8 17.7 8.8e-09 34.8 17.7 1.9 1 1 1 2 2 2 1 FecCD transport family Consortin_C PF15281.6 gi|21227437|ref|NP_633359.1| - 0.17 11.9 0.6 0.37 10.8 0.6 1.6 1 0 0 1 1 1 0 Consortin C-terminus DUF3302 PF11742.8 gi|21227437|ref|NP_633359.1| - 6.9 6.9 14.5 0.089 12.9 3.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3302) MAT1 PF06391.13 gi|21227438|ref|NP_633360.1| - 0.45 10.3 1.9 9 6.1 0.6 2.1 2 0 0 2 2 2 0 CDK-activating kinase assembly factor MAT1 Met_asp_mut_E PF06368.11 gi|21227439|ref|NP_633361.1| - 0.14 10.6 0.0 0.23 9.9 0.0 1.2 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) DUF11 PF01345.18 gi|21227440|ref|NP_633362.1| - 1.5e-40 137.4 60.5 3.1e-05 24.2 1.0 9.4 9 0 0 9 9 9 8 Domain of unknown function DUF11 ATP-synt_ab_Xtn PF16886.5 gi|21227440|ref|NP_633362.1| - 0.0018 18.1 9.1 0.89 9.4 0.1 5.7 5 0 0 5 5 5 1 ATPsynthase alpha/beta subunit N-term extension AbrB-like PF14250.6 gi|21227440|ref|NP_633362.1| - 0.014 15.4 4.7 9.2 6.4 0.1 5.1 5 0 0 5 5 5 0 AbrB-like transcriptional regulator Integrase_DNA PF02920.15 gi|21227440|ref|NP_633362.1| - 0.076 12.7 0.0 69 3.3 0.0 4.2 6 0 0 6 6 6 0 DNA binding domain of tn916 integrase DUF2393 PF09624.10 gi|21227440|ref|NP_633362.1| - 1.7 8.6 21.5 7.5 6.5 0.2 6.9 8 0 0 8 8 8 0 Protein of unknown function (DUF2393) TPP_enzyme_C PF02775.21 gi|21227441|ref|NP_633363.1| - 8.7e-28 97.0 0.0 1.5e-27 96.3 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|21227442|ref|NP_633364.1| - 5.3e-67 225.9 0.1 7.3e-67 225.5 0.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|21227442|ref|NP_633364.1| - 8.9e-34 115.9 0.2 1.9e-33 114.8 0.2 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|21227442|ref|NP_633364.1| - 1.9e-07 31.0 0.1 4e-07 29.9 0.1 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fer4 PF00037.27 gi|21227443|ref|NP_633365.1| - 5.7e-13 48.1 22.8 6.5e-08 32.1 4.6 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21227443|ref|NP_633365.1| - 1.2e-09 37.8 19.6 1.4e-05 25.0 3.2 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21227443|ref|NP_633365.1| - 5.3e-09 35.6 17.1 0.00011 22.1 2.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21227443|ref|NP_633365.1| - 1.3e-07 31.7 10.6 1.3e-07 31.7 10.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21227443|ref|NP_633365.1| - 2.2e-07 30.9 10.6 2.2e-07 30.9 10.6 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227443|ref|NP_633365.1| - 5.2e-07 30.2 18.0 8.9e-07 29.4 13.8 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21227443|ref|NP_633365.1| - 1.2e-06 28.5 15.3 0.00035 20.6 0.5 2.9 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227443|ref|NP_633365.1| - 3.4e-06 27.9 17.3 0.0019 19.1 2.0 3.0 2 1 1 3 3 3 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|21227443|ref|NP_633365.1| - 3.6e-05 23.9 19.7 0.0067 16.9 2.4 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|21227443|ref|NP_633365.1| - 0.0016 19.0 10.0 0.051 14.1 0.8 2.7 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|21227443|ref|NP_633365.1| - 0.0027 18.2 19.4 0.45 11.1 3.1 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21227443|ref|NP_633365.1| - 0.0033 17.8 18.6 0.34 11.4 3.7 2.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21227443|ref|NP_633365.1| - 0.021 15.5 11.2 0.17 12.6 3.4 2.8 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|21227443|ref|NP_633365.1| - 0.12 13.2 15.5 0.31 11.9 1.7 2.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain POR PF01558.18 gi|21227444|ref|NP_633366.1| - 5e-41 140.7 1.2 5.8e-41 140.5 1.2 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Dus PF01207.17 gi|21227445|ref|NP_633367.1| - 2e-79 266.9 0.0 2.4e-79 266.7 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|21227445|ref|NP_633367.1| - 7.9e-05 22.2 0.0 0.00013 21.5 0.0 1.2 1 0 0 1 1 1 1 Histidine biosynthesis protein Oxidored_FMN PF00724.20 gi|21227445|ref|NP_633367.1| - 0.0058 15.9 0.0 0.0085 15.4 0.0 1.2 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family ThiG PF05690.14 gi|21227445|ref|NP_633367.1| - 0.01 15.2 0.1 0.019 14.3 0.1 1.4 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG SOR_SNZ PF01680.17 gi|21227445|ref|NP_633367.1| - 0.018 14.9 0.2 0.079 12.7 0.1 1.9 1 1 1 2 2 2 0 SOR/SNZ family BtpA PF03437.15 gi|21227445|ref|NP_633367.1| - 0.056 12.9 0.1 0.085 12.3 0.1 1.2 1 0 0 1 1 1 0 BtpA family Peptidase_S24 PF00717.23 gi|21227446|ref|NP_633368.1| - 3.5e-05 23.7 0.2 6.1e-05 22.9 0.2 1.4 1 0 0 1 1 1 1 Peptidase S24-like DNA_pol_E_B PF04042.16 gi|21227447|ref|NP_633369.1| - 1.2e-15 57.5 0.0 1.9e-15 56.8 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos PF00149.28 gi|21227447|ref|NP_633369.1| - 4.1e-13 50.3 0.2 8.3e-13 49.3 0.1 1.6 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|21227447|ref|NP_633369.1| - 2.7e-09 37.4 0.3 7e-09 36.1 0.3 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain tRNA_anti-codon PF01336.25 gi|21227447|ref|NP_633369.1| - 4.7e-05 23.3 0.0 0.00011 22.1 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Wyosine_form PF08608.12 gi|21227448|ref|NP_633370.1| - 1.1e-23 83.4 0.0 1.9e-23 82.6 0.0 1.5 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 gi|21227448|ref|NP_633370.1| - 1.3e-20 74.4 0.2 2.2e-19 70.5 0.1 2.5 2 1 0 2 2 2 1 Radical SAM superfamily eRF1_2 PF03464.15 gi|21227449|ref|NP_633371.1| - 7.6e-42 142.8 0.0 1.3e-41 142.1 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|21227449|ref|NP_633371.1| - 1.3e-30 106.1 0.0 5.9e-30 104.1 0.0 2.0 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_1 PF03463.15 gi|21227449|ref|NP_633371.1| - 2.2e-14 53.6 0.0 4e-14 52.7 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 baeRF_family10 PF18854.1 gi|21227449|ref|NP_633371.1| - 1.8e-10 41.2 0.0 3.5e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 acVLRF1 PF18859.1 gi|21227449|ref|NP_633371.1| - 2e-10 41.1 0.0 4e-10 40.1 0.0 1.5 1 1 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor HypA PF01155.19 gi|21227449|ref|NP_633371.1| - 0.012 15.6 0.0 0.023 14.7 0.0 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RNA_POL_M_15KD PF02150.16 gi|21227449|ref|NP_633371.1| - 0.042 13.7 0.9 12 5.9 0.1 2.8 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit Zn-ribbon_8 PF09723.10 gi|21227449|ref|NP_633371.1| - 0.11 12.6 2.8 0.65 10.2 0.6 2.6 2 0 0 2 2 2 0 Zinc ribbon domain zf-TFIIB PF13453.6 gi|21227449|ref|NP_633371.1| - 0.12 11.7 0.1 0.31 10.4 0.1 1.7 1 0 0 1 1 1 0 Transcription factor zinc-finger DUF1759 PF03564.15 gi|21227449|ref|NP_633371.1| - 0.13 12.2 0.0 0.5 10.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) RE_LlaMI PF09562.10 gi|21227449|ref|NP_633371.1| - 0.15 11.6 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 LlaMI restriction endonuclease zf-ribbon_3 PF13248.6 gi|21227449|ref|NP_633371.1| - 0.22 11.0 3.0 0.93 9.0 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|21227449|ref|NP_633371.1| - 0.24 11.3 0.8 0.71 9.8 0.8 1.8 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.6 gi|21227449|ref|NP_633371.1| - 0.28 11.0 3.9 5.2 6.9 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|21227449|ref|NP_633371.1| - 0.36 10.8 3.0 0.37 10.8 0.3 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain tRNA-synt_1d PF00750.19 gi|21227450|ref|NP_633372.1| - 1.2e-38 133.0 0.1 2.1e-38 132.2 0.1 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|21227450|ref|NP_633372.1| - 6e-33 113.5 0.1 1.3e-32 112.5 0.1 1.6 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|21227450|ref|NP_633372.1| - 5e-14 52.7 0.1 1.4e-13 51.2 0.1 1.8 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1g PF09334.11 gi|21227450|ref|NP_633372.1| - 4.7e-07 28.9 0.0 0.0012 17.7 0.0 3.2 2 1 1 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 gi|21227450|ref|NP_633372.1| - 1.5e-06 27.4 0.0 0.026 13.4 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 gi|21227450|ref|NP_633372.1| - 9.3e-05 21.9 0.1 0.00016 21.1 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 gi|21227450|ref|NP_633372.1| - 0.0065 14.8 0.0 0.0096 14.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Phage_int_SAM_4 PF13495.6 gi|21227451|ref|NP_633373.1| - 0.00093 19.6 0.0 0.0018 18.7 0.0 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain COX4_pro PF03626.14 gi|21227452|ref|NP_633374.1| - 0.21 12.0 0.0 0.29 11.6 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic Cytochrome C oxidase subunit IV Asn_synthase PF00733.21 gi|21227453|ref|NP_633375.1| - 9.7e-16 58.4 0.0 5.1e-07 29.7 0.0 2.2 2 0 0 2 2 2 2 Asparagine synthase GATase_7 PF13537.6 gi|21227453|ref|NP_633375.1| - 7.1e-05 22.7 0.0 0.0002 21.2 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain QueC PF06508.13 gi|21227453|ref|NP_633375.1| - 0.00013 21.6 0.0 0.00054 19.5 0.0 1.9 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|21227453|ref|NP_633375.1| - 0.022 13.9 0.0 0.048 12.8 0.0 1.7 1 0 0 1 1 1 0 NAD synthase AARP2CN PF08142.12 gi|21227453|ref|NP_633375.1| - 0.07 13.2 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 AARP2CN (NUC121) domain RHH_1 PF01402.21 gi|21227456|ref|NP_633378.1| - 0.0012 18.6 0.1 0.0057 16.5 0.0 1.9 1 1 1 2 2 2 1 Ribbon-helix-helix protein, copG family Latarcin PF10279.9 gi|21227456|ref|NP_633378.1| - 0.0088 16.4 0.2 0.01 16.2 0.2 1.1 1 0 0 1 1 1 1 Latarcin precursor Tho1_MOS11_C PF18592.1 gi|21227456|ref|NP_633378.1| - 0.017 14.9 0.0 0.022 14.5 0.0 1.2 1 0 0 1 1 1 0 Tho1/MOS11 C-terminal domain BLOC1_2 PF10046.9 gi|21227456|ref|NP_633378.1| - 0.041 14.2 0.1 0.042 14.1 0.1 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4113 PF13438.6 gi|21227456|ref|NP_633378.1| - 0.31 11.2 1.5 8.3 6.6 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4113) TRAM PF01938.20 gi|21227457|ref|NP_633379.1| - 2.2e-17 62.8 0.9 2.5e-17 62.6 0.9 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|21227457|ref|NP_633379.1| - 0.11 12.3 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) TRAM PF01938.20 gi|21227458|ref|NP_633380.1| - 5.5e-17 61.5 1.2 6.1e-17 61.4 1.2 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|21227458|ref|NP_633380.1| - 0.11 12.3 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) TRAM PF01938.20 gi|21227459|ref|NP_633381.1| - 1.2e-16 60.4 1.3 1.4e-16 60.2 1.3 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|21227459|ref|NP_633381.1| - 0.049 13.4 0.1 0.09 12.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) S1 PF00575.23 gi|21227459|ref|NP_633381.1| - 0.42 11.0 4.7 8 6.9 0.4 2.3 1 1 1 2 2 2 0 S1 RNA binding domain TRAM PF01938.20 gi|21227460|ref|NP_633382.1| - 2.1e-17 62.8 0.6 2.4e-17 62.7 0.6 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|21227460|ref|NP_633382.1| - 0.051 13.3 0.1 0.09 12.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) Bactofilin PF04519.13 gi|21227461|ref|NP_633383.1| - 3.4e-06 27.3 7.8 0.0015 18.7 0.2 2.1 1 1 1 2 2 2 2 Polymer-forming cytoskeletal Phage_spike PF18715.1 gi|21227461|ref|NP_633383.1| - 0.0048 16.9 0.1 0.043 13.9 0.0 2.3 2 0 0 2 2 2 1 Phage spike trimer ABC_tran PF00005.27 gi|21227462|ref|NP_633384.1| - 1.2e-32 113.3 0.0 1.9e-32 112.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21227462|ref|NP_633384.1| - 1.3e-07 31.7 0.2 0.002 18.0 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 gi|21227462|ref|NP_633384.1| - 2.2e-06 28.2 0.6 2.1e-05 24.9 0.6 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|21227462|ref|NP_633384.1| - 0.00067 19.6 0.0 0.0012 18.7 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|21227462|ref|NP_633384.1| - 0.00076 19.8 0.6 0.006 16.8 0.6 2.2 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|21227462|ref|NP_633384.1| - 0.0015 18.7 0.0 0.0048 17.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|21227462|ref|NP_633384.1| - 0.0015 18.9 0.3 0.0074 16.7 0.2 2.1 1 1 1 2 2 2 1 AAA ATPase domain Rad17 PF03215.15 gi|21227462|ref|NP_633384.1| - 0.0043 17.0 0.0 0.0091 15.9 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain IstB_IS21 PF01695.17 gi|21227462|ref|NP_633384.1| - 0.0073 16.1 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.6 gi|21227462|ref|NP_633384.1| - 0.0082 16.4 0.1 0.037 14.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|21227462|ref|NP_633384.1| - 0.016 14.9 0.1 0.033 13.9 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|21227462|ref|NP_633384.1| - 0.019 15.5 0.2 0.027 15.0 0.2 1.4 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|21227462|ref|NP_633384.1| - 0.02 14.3 0.0 1.6 8.1 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain ATPase_2 PF01637.18 gi|21227462|ref|NP_633384.1| - 0.021 14.7 0.0 0.33 10.8 0.0 2.1 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 gi|21227462|ref|NP_633384.1| - 0.031 14.3 0.4 0.11 12.5 0.1 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) NACHT PF05729.12 gi|21227462|ref|NP_633384.1| - 0.047 13.6 0.6 0.11 12.4 0.1 1.8 2 1 0 2 2 2 0 NACHT domain NTPase_1 PF03266.15 gi|21227462|ref|NP_633384.1| - 0.058 13.3 1.2 4.6 7.1 0.1 2.4 2 0 0 2 2 2 0 NTPase AAA_18 PF13238.6 gi|21227462|ref|NP_633384.1| - 0.067 13.7 0.4 0.21 12.1 0.2 1.9 2 0 0 2 2 2 0 AAA domain SCAN PF02023.17 gi|21227462|ref|NP_633384.1| - 0.095 12.5 0.0 0.28 11.0 0.0 1.8 1 0 0 1 1 1 0 SCAN domain AAA_25 PF13481.6 gi|21227462|ref|NP_633384.1| - 0.097 12.2 0.2 0.26 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 gi|21227462|ref|NP_633384.1| - 0.15 12.0 0.1 0.27 11.2 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_ATPase PF09818.9 gi|21227462|ref|NP_633384.1| - 0.16 10.7 0.3 0.47 9.2 0.1 1.9 2 1 0 2 2 2 0 Predicted ATPase of the ABC class BPD_transp_1 PF00528.22 gi|21227463|ref|NP_633385.1| - 8e-23 81.1 11.6 8e-23 81.1 11.6 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component NMT1_2 PF13379.6 gi|21227464|ref|NP_633386.1| - 1.6e-38 132.8 0.1 2.3e-38 132.3 0.1 1.2 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 gi|21227464|ref|NP_633386.1| - 7e-17 62.1 0.0 9.3e-17 61.7 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|21227464|ref|NP_633386.1| - 1.1e-07 31.7 0.0 1.8e-07 31.0 0.0 1.3 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1_3 PF16868.5 gi|21227464|ref|NP_633386.1| - 6e-05 22.6 0.0 0.0013 18.2 0.0 2.3 1 1 1 2 2 2 1 NMT1-like family DctP PF03480.13 gi|21227464|ref|NP_633386.1| - 0.0019 17.6 0.0 0.0032 16.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein, family 7 LysR_substrate PF03466.20 gi|21227464|ref|NP_633386.1| - 0.01 15.2 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 0 LysR substrate binding domain Ppnp PF06865.11 gi|21227464|ref|NP_633386.1| - 0.081 13.4 0.0 0.19 12.1 0.0 1.6 1 0 0 1 1 1 0 Pyrimidine/purine nucleoside phosphorylase HTH_3 PF01381.22 gi|21227465|ref|NP_633387.1| - 1.7e-08 34.4 0.1 5.5e-08 32.7 0.0 1.9 2 1 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|21227465|ref|NP_633387.1| - 0.0013 18.7 0.0 0.0033 17.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain PrpR_N PF06506.11 gi|21227465|ref|NP_633387.1| - 0.0016 18.0 0.5 0.0029 17.2 0.5 1.4 1 0 0 1 1 1 1 Propionate catabolism activator CENP-B_N PF04218.13 gi|21227465|ref|NP_633387.1| - 0.014 15.0 1.3 0.63 9.7 0.0 3.4 4 0 0 4 4 4 0 CENP-B N-terminal DNA-binding domain HTH_31 PF13560.6 gi|21227465|ref|NP_633387.1| - 0.07 13.5 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_26 PF13443.6 gi|21227465|ref|NP_633387.1| - 0.12 12.8 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain S-layer PF07752.11 gi|21227466|ref|NP_633388.1| - 8.7e-192 634.5 29.4 5.4e-96 320.6 13.5 3.1 3 0 0 3 3 3 2 S-layer protein CarboxypepD_reg PF13620.6 gi|21227466|ref|NP_633388.1| - 1.3e-09 38.2 24.7 0.00018 21.7 0.2 6.5 5 1 1 6 6 6 2 Carboxypeptidase regulatory-like domain Ig_3 PF13927.6 gi|21227466|ref|NP_633388.1| - 1.1e-06 29.1 16.7 0.075 13.6 0.9 6.7 5 1 2 7 7 7 2 Immunoglobulin domain CarbopepD_reg_2 PF13715.6 gi|21227466|ref|NP_633388.1| - 1.3e-05 25.1 16.9 0.0025 17.8 0.2 4.9 5 0 0 5 5 4 2 CarboxypepD_reg-like domain I-set PF07679.16 gi|21227466|ref|NP_633388.1| - 8.1e-05 22.6 12.3 0.0093 16.0 0.9 5.7 6 1 0 6 6 5 1 Immunoglobulin I-set domain SH3_16 PF18348.1 gi|21227466|ref|NP_633388.1| - 0.00015 21.5 1.0 0.3 10.9 0.0 2.9 3 0 0 3 3 3 2 Bacterial dipeptidyl-peptidase Sh3 domain Y_Y_Y PF07495.13 gi|21227466|ref|NP_633388.1| - 0.00022 21.1 10.6 0.021 14.7 1.2 4.3 4 1 0 4 4 4 2 Y_Y_Y domain PEGA PF08308.11 gi|21227466|ref|NP_633388.1| - 0.00023 21.0 4.9 0.0017 18.2 0.8 4.1 3 0 0 3 3 2 1 PEGA domain DUF4198 PF10670.9 gi|21227466|ref|NP_633388.1| - 0.0015 18.9 9.0 0.09 13.1 0.2 4.0 4 0 0 4 4 3 1 Domain of unknown function (DUF4198) Transthyretin PF00576.21 gi|21227466|ref|NP_633388.1| - 0.011 16.4 2.5 21 5.8 0.0 4.9 4 1 1 5 5 5 0 HIUase/Transthyretin family PA-IIL PF07472.11 gi|21227466|ref|NP_633388.1| - 0.018 15.3 1.7 0.43 10.9 0.4 3.3 2 0 0 2 2 2 0 Fucose-binding lectin II (PA-IIL) PapC_N PF13954.6 gi|21227466|ref|NP_633388.1| - 0.023 14.7 0.4 0.16 12.0 0.0 2.5 2 0 0 2 2 2 0 PapC N-terminal domain PKD_3 PF16820.5 gi|21227466|ref|NP_633388.1| - 0.03 14.0 11.6 0.051 13.3 0.1 5.9 5 1 0 5 5 5 0 PKD-like domain ig PF00047.25 gi|21227466|ref|NP_633388.1| - 0.039 14.1 1.7 11 6.3 0.0 3.4 3 0 0 3 3 3 0 Immunoglobulin domain SRTM1 PF15872.5 gi|21227466|ref|NP_633388.1| - 0.056 13.6 0.6 13 5.9 0.0 3.0 2 0 0 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 YtkA PF13115.6 gi|21227466|ref|NP_633388.1| - 0.06 14.0 4.1 15 6.2 0.1 4.1 3 1 0 3 3 3 0 YtkA-like Fn3-like PF14310.6 gi|21227466|ref|NP_633388.1| - 0.08 13.1 1.9 12 6.0 0.0 4.2 4 0 0 4 4 3 0 Fibronectin type III-like domain DUF3324 PF11797.8 gi|21227466|ref|NP_633388.1| - 0.092 12.7 0.6 5.5 7.0 0.0 3.8 4 0 0 4 4 4 0 Protein of unknown function C-terminal (DUF3324) DUF4982 PF16355.5 gi|21227466|ref|NP_633388.1| - 0.1 12.6 0.3 2 8.4 0.0 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4982) Cupredoxin_1 PF13473.6 gi|21227466|ref|NP_633388.1| - 0.11 12.7 5.2 0.28 11.3 0.2 4.0 3 1 1 4 4 3 0 Cupredoxin-like domain PrcB_C PF14343.6 gi|21227466|ref|NP_633388.1| - 0.25 11.5 2.1 16 5.7 0.0 3.5 3 0 0 3 3 2 0 PrcB C-terminal GBS_Bsp-like PF08481.10 gi|21227466|ref|NP_633388.1| - 0.32 11.2 0.0 0.32 11.2 0.0 4.7 6 0 0 6 6 5 0 GBS Bsp-like repeat DUF1616 PF07760.11 gi|21227466|ref|NP_633388.1| - 0.47 9.8 3.3 0.5 9.7 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1616) TTR-52 PF01060.23 gi|21227466|ref|NP_633388.1| - 0.94 10.2 4.4 9.5 7.0 0.1 4.4 4 0 0 4 4 4 0 Transthyretin-like family tRNA-synt_1c_C PF03950.18 gi|21227466|ref|NP_633388.1| - 1 9.2 7.6 4 7.3 0.1 4.1 4 1 1 5 5 5 0 tRNA synthetases class I (E and Q), anti-codon binding domain EMP24_GP25L PF01105.24 gi|21227466|ref|NP_633388.1| - 1.6 8.6 7.6 16 5.4 0.1 4.3 2 1 0 3 3 3 0 emp24/gp25L/p24 family/GOLD PKD PF00801.20 gi|21227466|ref|NP_633388.1| - 2.6 7.9 30.2 0.015 15.1 3.7 5.9 5 1 1 6 6 6 0 PKD domain MetallophosN PF16371.5 gi|21227466|ref|NP_633388.1| - 5.9 7.2 9.4 8 6.8 0.2 4.7 5 0 0 5 5 3 0 N terminal of Calcineurin-like phosphoesterase AIRS PF00586.24 gi|21227467|ref|NP_633389.1| - 3.8e-21 75.5 1.8 7.2e-21 74.7 1.8 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|21227467|ref|NP_633389.1| - 3.2e-07 30.6 0.0 5.5e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Radical_SAM PF04055.21 gi|21227468|ref|NP_633390.1| - 3e-17 63.5 0.0 4.7e-17 62.9 0.0 1.5 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|21227468|ref|NP_633390.1| - 7.2e-09 36.0 0.0 1.4e-08 35.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|21227468|ref|NP_633390.1| - 2.2e-06 27.8 0.0 7.4e-06 26.1 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain ATPgrasp_YheCD PF14398.6 gi|21227468|ref|NP_633390.1| - 0.0064 15.8 0.1 0.021 14.1 0.0 1.7 1 1 1 2 2 2 1 YheC/D like ATP-grasp DUF3381 PF11861.8 gi|21227468|ref|NP_633390.1| - 0.039 13.8 0.1 0.066 13.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) CinA_KH PF18146.1 gi|21227468|ref|NP_633390.1| - 0.068 13.3 0.1 2.4 8.4 0.1 2.4 2 0 0 2 2 2 0 Damage-inducible protein CinA KH domain NRDD PF13597.6 gi|21227469|ref|NP_633391.1| - 1.6e-156 522.4 0.0 1.9e-156 522.1 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Glutaredoxin PF00462.24 gi|21227470|ref|NP_633392.1| - 2.6e-08 34.0 0.1 3.5e-08 33.6 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 gi|21227470|ref|NP_633392.1| - 0.00061 20.2 0.0 0.00074 19.9 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) GST_N_3 PF13417.6 gi|21227470|ref|NP_633392.1| - 0.0077 16.6 0.0 0.01 16.3 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.6 gi|21227470|ref|NP_633392.1| - 0.11 12.9 0.2 0.12 12.9 0.2 1.2 1 1 0 1 1 1 0 Thioredoxin-like domain Rad51 PF08423.11 gi|21227471|ref|NP_633393.1| - 3.1e-32 111.8 0.1 3.8e-32 111.5 0.1 1.1 1 0 0 1 1 1 1 Rad51 ATPase PF06745.13 gi|21227471|ref|NP_633393.1| - 7.4e-15 54.9 0.4 1.3e-13 50.8 0.4 2.1 1 1 0 1 1 1 1 KaiC RecA PF00154.21 gi|21227471|ref|NP_633393.1| - 1.1e-10 41.5 0.0 1.3e-10 41.3 0.0 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|21227471|ref|NP_633393.1| - 1.6e-08 34.3 0.0 3.3e-08 33.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain Zot PF05707.12 gi|21227471|ref|NP_633393.1| - 1.7e-06 27.8 0.0 2.1e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_24 PF13479.6 gi|21227471|ref|NP_633393.1| - 3.3e-05 23.7 0.0 4.6e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|21227471|ref|NP_633393.1| - 0.00018 21.3 0.0 0.00029 20.6 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein TrwB_AAD_bind PF10412.9 gi|21227471|ref|NP_633393.1| - 0.00046 19.2 0.1 0.0011 17.9 0.0 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain DUF815 PF05673.13 gi|21227471|ref|NP_633393.1| - 0.00097 18.4 0.0 0.0015 17.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) PhoH PF02562.16 gi|21227471|ref|NP_633393.1| - 0.001 18.6 0.2 0.0018 17.7 0.2 1.3 1 0 0 1 1 1 1 PhoH-like protein CbiA PF01656.23 gi|21227471|ref|NP_633393.1| - 0.0022 18.0 0.0 0.003 17.6 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain SRP54 PF00448.22 gi|21227471|ref|NP_633393.1| - 0.003 17.2 0.0 0.0046 16.6 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain DUF2075 PF09848.9 gi|21227471|ref|NP_633393.1| - 0.0041 16.4 0.0 0.0051 16.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_31 PF13614.6 gi|21227471|ref|NP_633393.1| - 0.0086 16.0 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|21227471|ref|NP_633393.1| - 0.0099 15.2 0.0 0.018 14.4 0.0 1.5 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain UvrD-helicase PF00580.21 gi|21227471|ref|NP_633393.1| - 0.019 14.5 0.0 0.021 14.3 0.0 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain AAA_18 PF13238.6 gi|21227471|ref|NP_633393.1| - 0.052 14.1 0.0 0.089 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain CLP1_P PF16575.5 gi|21227471|ref|NP_633393.1| - 0.064 13.0 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA PF00004.29 gi|21227471|ref|NP_633393.1| - 0.096 13.1 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.17 gi|21227471|ref|NP_633393.1| - 0.097 12.8 0.1 0.19 11.8 0.1 1.5 1 1 0 1 1 1 0 Helicase HerA, central domain AAA_30 PF13604.6 gi|21227471|ref|NP_633393.1| - 0.1 12.3 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain MipZ PF09140.11 gi|21227471|ref|NP_633393.1| - 0.15 11.3 0.0 0.22 10.8 0.0 1.3 1 0 0 1 1 1 0 ATPase MipZ ResIII PF04851.15 gi|21227471|ref|NP_633393.1| - 0.17 11.8 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Inos-1-P_synth PF01658.17 gi|21227472|ref|NP_633394.1| - 1.5e-32 112.1 0.0 2.6e-32 111.3 0.0 1.4 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase NAD_binding_5 PF07994.12 gi|21227472|ref|NP_633394.1| - 0.0043 16.5 0.0 0.011 15.2 0.0 1.7 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase DUF1611_N PF17396.2 gi|21227472|ref|NP_633394.1| - 0.15 12.3 0.0 0.33 11.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_N) Rossmann-like domain IF-2B PF01008.17 gi|21227473|ref|NP_633395.1| - 2.6e-79 266.4 0.0 3.1e-79 266.1 0.0 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family Peroxin-22 PF12827.7 gi|21227473|ref|NP_633395.1| - 0.059 13.3 0.0 0.3 11.0 0.0 2.0 2 0 0 2 2 2 0 Peroxisomal biogenesis protein family Sec61_beta PF03911.16 gi|21227474|ref|NP_633396.1| - 1.7e-15 56.7 0.1 2e-15 56.5 0.1 1.1 1 0 0 1 1 1 1 Sec61beta family AXE1 PF05448.12 gi|21227475|ref|NP_633397.1| - 9.7e-10 37.6 0.0 4.4e-09 35.4 0.0 1.8 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 gi|21227475|ref|NP_633397.1| - 7.5e-07 28.8 0.0 2.8e-05 23.7 0.0 2.1 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|21227475|ref|NP_633397.1| - 7.7e-05 22.1 0.0 0.00023 20.5 0.0 1.7 1 1 1 2 2 2 1 Serine aminopeptidase, S33 DLH PF01738.18 gi|21227475|ref|NP_633397.1| - 0.0017 17.9 0.0 0.002 17.7 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.13 gi|21227475|ref|NP_633397.1| - 0.0064 16.4 0.0 0.0083 16.0 0.0 1.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_1 PF00561.20 gi|21227475|ref|NP_633397.1| - 0.092 12.4 0.0 0.22 11.1 0.0 1.6 1 1 0 1 1 1 0 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|21227475|ref|NP_633397.1| - 0.1 12.5 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal UBM PF14377.6 gi|21227475|ref|NP_633397.1| - 0.23 11.0 0.7 0.86 9.1 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin binding region MutS_V PF00488.21 gi|21227476|ref|NP_633398.1| - 1.4e-07 31.7 0.0 2.4e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 MutS domain V HHH_5 PF14520.6 gi|21227476|ref|NP_633398.1| - 1.9e-05 25.2 0.2 0.0008 20.0 0.0 3.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain AAA_23 PF13476.6 gi|21227476|ref|NP_633398.1| - 0.078 13.5 3.0 1.5 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain HHH_2 PF12826.7 gi|21227476|ref|NP_633398.1| - 0.11 12.6 3.8 0.16 12.1 0.1 2.9 3 0 0 3 3 3 0 Helix-hairpin-helix motif PP_kinase_C_1 PF17941.1 gi|21227477|ref|NP_633399.1| - 1.5e-72 242.6 0.0 2.4e-72 241.9 0.0 1.3 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain 1 PP_kinase_C PF13090.6 gi|21227477|ref|NP_633399.1| - 8.2e-65 217.5 0.0 2.7e-64 215.8 0.0 1.8 2 0 0 2 2 2 1 Polyphosphate kinase C-terminal domain 2 PP_kinase PF02503.17 gi|21227477|ref|NP_633399.1| - 1.7e-63 213.9 0.1 7.4e-63 211.8 0.0 2.0 2 0 0 2 2 2 1 Polyphosphate kinase middle domain PP_kinase_N PF13089.6 gi|21227477|ref|NP_633399.1| - 3.3e-34 117.4 0.1 8.4e-34 116.1 0.1 1.7 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PLDc_2 PF13091.6 gi|21227477|ref|NP_633399.1| - 4.3e-09 36.3 0.0 8.4e-05 22.5 0.0 3.1 2 2 0 2 2 2 2 PLD-like domain MR_MLE_C PF13378.6 gi|21227477|ref|NP_633399.1| - 0.3 10.6 0.7 0.6 9.6 0.7 1.4 1 0 0 1 1 1 0 Enolase C-terminal domain-like Ppx-GppA PF02541.16 gi|21227478|ref|NP_633400.1| - 2e-64 217.8 0.9 3.9e-64 216.8 0.9 1.4 1 0 0 1 1 1 1 Ppx/GppA phosphatase family HD PF01966.22 gi|21227478|ref|NP_633400.1| - 2.3e-10 40.7 2.2 3.5e-10 40.2 1.0 1.9 2 0 0 2 2 2 1 HD domain FtsA PF14450.6 gi|21227478|ref|NP_633400.1| - 0.00077 19.9 0.0 0.015 15.7 0.0 2.6 2 1 0 2 2 2 1 Cell division protein FtsA Hydantoinase_A PF01968.18 gi|21227478|ref|NP_633400.1| - 0.089 12.0 0.1 0.22 10.8 0.0 1.5 1 1 0 1 1 1 0 Hydantoinase/oxoprolinase CHAD PF05235.14 gi|21227479|ref|NP_633401.1| - 2.7e-54 184.5 0.2 2.7e-54 184.5 0.2 2.0 2 0 0 2 2 2 1 CHAD domain CYTH PF01928.21 gi|21227479|ref|NP_633401.1| - 2e-23 83.2 1.5 3.5e-23 82.4 0.4 2.0 2 0 0 2 2 2 1 CYTH domain AAA_16 PF13191.6 gi|21227480|ref|NP_633402.1| - 1.9e-12 47.9 0.0 3.2e-10 40.6 0.0 3.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_7 PF12775.7 gi|21227480|ref|NP_633402.1| - 8.3e-06 25.4 0.0 0.00034 20.2 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA PF00004.29 gi|21227480|ref|NP_633402.1| - 9.7e-06 26.0 0.0 2.1e-05 24.9 0.0 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Cdc6_C PF09079.11 gi|21227480|ref|NP_633402.1| - 1.8e-05 24.6 0.1 5.3e-05 23.1 0.1 1.8 1 1 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_11 PF13086.6 gi|21227480|ref|NP_633402.1| - 0.00023 21.1 0.0 0.00037 20.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|21227480|ref|NP_633402.1| - 0.00031 21.0 0.0 0.00059 20.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|21227480|ref|NP_633402.1| - 0.015 14.4 0.0 0.075 12.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TniB PF05621.11 gi|21227480|ref|NP_633402.1| - 0.03 13.7 0.0 0.048 13.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein AAA_30 PF13604.6 gi|21227480|ref|NP_633402.1| - 0.033 13.9 0.0 0.057 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|21227480|ref|NP_633402.1| - 0.033 13.9 0.0 2.6 7.7 0.0 2.5 2 0 0 2 2 2 0 IstB-like ATP binding protein Zeta_toxin PF06414.12 gi|21227480|ref|NP_633402.1| - 0.035 13.4 0.0 0.074 12.3 0.0 1.5 1 1 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 gi|21227480|ref|NP_633402.1| - 0.037 14.4 0.0 0.094 13.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|21227480|ref|NP_633402.1| - 0.054 13.5 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TIP49_C PF17856.1 gi|21227480|ref|NP_633402.1| - 0.055 13.6 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 TIP49 AAA-lid domain DUF835 PF05763.12 gi|21227480|ref|NP_633402.1| - 0.055 13.2 0.0 0.093 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF835) AAA_24 PF13479.6 gi|21227480|ref|NP_633402.1| - 0.067 12.9 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_32 PF13654.6 gi|21227480|ref|NP_633402.1| - 0.074 11.8 0.0 1.4 7.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|21227480|ref|NP_633402.1| - 0.11 11.7 0.0 0.19 10.9 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain RuvB_N PF05496.12 gi|21227480|ref|NP_633402.1| - 0.14 11.8 0.0 0.26 11.0 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Cpn60_TCP1 PF00118.24 gi|21227481|ref|NP_633403.1| - 1.9e-182 607.3 20.7 2.2e-182 607.1 20.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family HSP70 PF00012.20 gi|21227482|ref|NP_633404.1| - 2.4e-176 587.5 3.9 7.2e-174 579.3 3.9 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|21227482|ref|NP_633404.1| - 7.2e-14 51.3 0.6 1.3e-13 50.5 0.6 1.4 1 0 0 1 1 1 1 MreB/Mbl protein DnaJ PF00226.31 gi|21227483|ref|NP_633405.1| - 1.4e-18 66.8 6.5 2.3e-18 66.1 6.5 1.4 1 0 0 1 1 1 1 DnaJ domain DUF169 PF02596.15 gi|21227484|ref|NP_633406.1| - 1.8e-26 93.4 0.0 2.3e-26 93.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 DUF3721 PF12518.8 gi|21227484|ref|NP_633406.1| - 0.35 10.7 1.3 5.1 7.0 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function tRNA-synt_2d PF01409.20 gi|21227485|ref|NP_633407.1| - 1.6e-54 185.0 0.0 2.2e-49 168.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) SepRS_C PF18006.1 gi|21227485|ref|NP_633407.1| - 2.7e-13 49.7 0.0 7.3e-13 48.4 0.0 1.8 1 0 0 1 1 1 1 O-phosphoseryl-tRNA synthetase C-terminal domain tRNA_synthFbeta PF17759.1 gi|21227485|ref|NP_633407.1| - 3.8e-10 39.6 0.0 2.9e-06 26.9 0.0 2.2 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain Lambda_Bor PF06291.11 gi|21227485|ref|NP_633407.1| - 0.067 13.2 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Bor protein Styelin PF17562.2 gi|21227485|ref|NP_633407.1| - 0.074 13.4 0.0 0.36 11.2 0.0 2.1 2 0 0 2 2 2 0 Styelin Translin PF01997.16 gi|21227486|ref|NP_633408.1| - 9e-07 29.1 0.0 7e-06 26.2 0.0 2.0 1 1 0 1 1 1 1 Translin family UPF0147 PF03685.13 gi|21227487|ref|NP_633409.1| - 1.8e-34 117.6 1.9 2.1e-34 117.4 1.9 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.12 gi|21227487|ref|NP_633409.1| - 0.13 12.6 0.0 3 8.2 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) Auto_anti-p27 PF06677.12 gi|21227488|ref|NP_633410.1| - 6e-12 45.5 0.3 9e-12 45.0 0.3 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) NusG PF02357.19 gi|21227488|ref|NP_633410.1| - 0.095 13.2 0.0 0.29 11.7 0.0 1.8 2 0 0 2 2 2 0 Transcription termination factor nusG Pox_Ag35 PF03286.14 gi|21227488|ref|NP_633410.1| - 1.2 8.9 7.4 1.5 8.6 7.4 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein PGBA_C PF15437.6 gi|21227488|ref|NP_633410.1| - 3.6 8.0 12.6 4.1 7.8 10.8 1.9 2 0 0 2 2 2 0 Plasminogen-binding protein pgbA C-terminal ERCC4 PF02732.15 gi|21227489|ref|NP_633411.1| - 1.2e-25 90.6 0.0 4.9e-25 88.6 0.0 2.2 2 0 0 2 2 2 1 ERCC4 domain Helicase_C PF00271.31 gi|21227489|ref|NP_633411.1| - 6.4e-25 87.7 0.0 5.9e-21 74.9 0.0 2.6 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD PF00270.29 gi|21227489|ref|NP_633411.1| - 1.7e-17 63.8 0.0 5.1e-17 62.2 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|21227489|ref|NP_633411.1| - 3.1e-15 56.6 0.1 1e-14 54.9 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_5 PF14520.6 gi|21227489|ref|NP_633411.1| - 5.2e-15 55.8 0.0 5.6e-14 52.5 0.1 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|21227489|ref|NP_633411.1| - 4.8e-12 45.8 0.0 1.4e-11 44.3 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|21227489|ref|NP_633411.1| - 1.2e-06 28.1 0.1 3.6e-05 23.4 0.1 2.8 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|21227489|ref|NP_633411.1| - 0.00061 20.0 0.1 0.0057 16.9 0.1 2.8 3 1 0 3 3 3 1 Helix-hairpin-helix motif HHH_8 PF14716.6 gi|21227489|ref|NP_633411.1| - 0.00088 19.6 0.1 0.0041 17.5 0.1 2.3 1 1 0 1 1 1 1 Helix-hairpin-helix domain 5_3_exonuc PF01367.20 gi|21227489|ref|NP_633411.1| - 0.0038 17.8 5.0 0.012 16.1 0.0 3.7 3 1 0 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold HGTP_anticodon PF03129.20 gi|21227490|ref|NP_633412.1| - 3.7e-22 78.3 1.8 4.3e-21 74.9 0.0 2.9 3 0 0 3 3 3 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|21227490|ref|NP_633412.1| - 9e-09 35.5 0.0 1.8e-08 34.6 0.0 1.6 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Zn-ribbon_8 PF09723.10 gi|21227490|ref|NP_633412.1| - 9 6.5 8.6 11 6.3 4.5 2.7 2 1 1 3 3 3 0 Zinc ribbon domain CPBP PF02517.16 gi|21227491|ref|NP_633413.1| - 4.8e-09 36.5 19.1 3.1e-08 33.9 17.0 2.9 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease Choline_transpo PF04515.12 gi|21227491|ref|NP_633413.1| - 8.6 5.5 13.8 1.6 7.9 3.6 2.3 2 0 0 2 2 2 0 Plasma-membrane choline transporter Gpr1_Fun34_YaaH PF01184.19 gi|21227492|ref|NP_633414.1| - 5.7e-33 114.3 21.0 7.9e-33 113.8 21.0 1.1 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DUF2583 PF10762.9 gi|21227492|ref|NP_633414.1| - 0.053 13.9 0.9 0.053 13.9 0.9 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2583) SLATT_fungal PF18142.1 gi|21227492|ref|NP_633414.1| - 0.59 10.1 3.0 1.6 8.7 0.2 2.3 2 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain FixP_N PF14715.6 gi|21227492|ref|NP_633414.1| - 1.1 9.1 0.0 1.1 9.1 0.0 3.6 4 0 0 4 4 4 0 N-terminal domain of cytochrome oxidase-cbb3, FixP SurE PF01975.17 gi|21227493|ref|NP_633415.1| - 3.3e-51 173.9 0.0 3.9e-51 173.6 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE WW PF00397.26 gi|21227493|ref|NP_633415.1| - 0.26 11.4 0.5 0.43 10.7 0.5 1.4 1 0 0 1 1 1 0 WW domain Radical_SAM PF04055.21 gi|21227495|ref|NP_633417.1| - 5.4e-32 111.5 1.8 1.5e-31 110.0 0.2 2.1 2 1 0 2 2 2 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|21227495|ref|NP_633417.1| - 2.7e-19 69.3 0.0 4.2e-19 68.7 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|21227495|ref|NP_633417.1| - 1.6e-08 34.9 0.2 3.4e-08 33.8 0.2 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|21227495|ref|NP_633417.1| - 5e-05 23.4 0.3 0.00011 22.3 0.3 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain CdhD PF03599.16 gi|21227495|ref|NP_633417.1| - 0.034 12.9 0.0 0.049 12.3 0.0 1.2 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit GATase_3 PF07685.14 gi|21227496|ref|NP_633418.1| - 3.4e-32 111.7 0.0 4.6e-32 111.2 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|21227496|ref|NP_633418.1| - 8.6e-23 81.2 2.8 6.5e-15 55.5 0.1 2.2 1 1 0 2 2 2 2 AAA domain CbiA PF01656.23 gi|21227496|ref|NP_633418.1| - 6.5e-20 71.5 0.0 1.1e-19 70.7 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain NTPase_1 PF03266.15 gi|21227496|ref|NP_633418.1| - 0.044 13.7 0.1 1.7 8.6 0.1 2.4 2 0 0 2 2 2 0 NTPase YHYH PF14240.6 gi|21227496|ref|NP_633418.1| - 0.052 13.5 0.1 1.5 8.8 0.0 2.3 2 0 0 2 2 2 0 YHYH protein DUF1611 PF07755.11 gi|21227496|ref|NP_633418.1| - 0.058 12.7 0.6 0.16 11.2 0.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain ParA PF10609.9 gi|21227496|ref|NP_633418.1| - 0.13 11.7 0.3 0.28 10.6 0.3 1.5 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase FTHFS PF01268.19 gi|21227496|ref|NP_633418.1| - 0.14 10.4 0.1 0.21 9.8 0.1 1.1 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase AAA_31 PF13614.6 gi|21227496|ref|NP_633418.1| - 0.16 11.9 0.4 0.3 11.0 0.4 1.4 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 gi|21227496|ref|NP_633418.1| - 0.19 10.9 0.1 0.29 10.3 0.1 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain Glyoxalase_2 PF12681.7 gi|21227497|ref|NP_633419.1| - 3.3e-53 178.6 1.8 3.9e-53 178.4 1.8 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|21227497|ref|NP_633419.1| - 5.7e-06 26.6 0.2 0.00031 20.9 0.2 2.4 2 1 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DUF2172 PF09940.9 gi|21227497|ref|NP_633419.1| - 0.022 15.1 0.1 2.9 8.4 0.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF2172) DNA_primase_lrg PF04104.14 gi|21227498|ref|NP_633420.1| - 2.8e-30 105.6 0.0 5.8e-30 104.6 0.0 1.4 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Skp1 PF01466.19 gi|21227498|ref|NP_633420.1| - 0.056 13.6 0.0 0.23 11.6 0.0 2.0 1 0 0 1 1 1 0 Skp1 family, dimerisation domain PCNA_N PF00705.18 gi|21227499|ref|NP_633421.1| - 3.9e-12 46.0 0.7 8.2e-12 44.9 0.2 1.7 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|21227499|ref|NP_633421.1| - 2.2e-10 40.8 0.0 6.4e-10 39.3 0.0 1.8 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|21227499|ref|NP_633421.1| - 0.00013 21.5 0.0 0.00035 20.1 0.0 1.6 2 0 0 2 2 2 1 Rad9 TFIIS_C PF01096.18 gi|21227500|ref|NP_633422.1| - 1.4e-18 66.4 4.1 1.4e-18 66.4 4.1 3.0 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|21227500|ref|NP_633422.1| - 3.1e-09 36.5 18.7 2.3e-08 33.8 2.8 3.2 3 0 0 3 3 3 2 RNA polymerases M/15 Kd subunit TF_Zn_Ribbon PF08271.12 gi|21227500|ref|NP_633422.1| - 1.1e-05 24.9 5.5 0.0091 15.5 0.4 2.7 2 1 0 2 2 2 2 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|21227500|ref|NP_633422.1| - 0.00021 21.2 8.5 0.00098 19.0 0.8 2.4 2 0 0 2 2 2 1 Transposase zinc-ribbon domain Nudix_N_2 PF14803.6 gi|21227500|ref|NP_633422.1| - 0.0011 18.9 6.6 0.098 12.6 0.1 3.5 3 1 0 3 3 3 1 Nudix N-terminal Ogr_Delta PF04606.12 gi|21227500|ref|NP_633422.1| - 0.0018 18.2 0.9 0.0018 18.2 0.9 2.4 3 0 0 3 3 2 1 Ogr/Delta-like zinc finger OrfB_Zn_ribbon PF07282.11 gi|21227500|ref|NP_633422.1| - 0.0028 17.5 9.3 0.02 14.8 1.7 2.5 2 1 0 2 2 2 1 Putative transposase DNA-binding domain C1_1 PF00130.22 gi|21227500|ref|NP_633422.1| - 0.003 17.4 5.0 0.55 10.2 1.3 2.5 2 1 0 2 2 2 2 Phorbol esters/diacylglycerol binding domain (C1 domain) TackOD1 PF18551.1 gi|21227500|ref|NP_633422.1| - 0.0038 16.9 6.7 0.03 14.0 0.6 2.7 2 1 0 2 2 2 1 Thaumarchaeal output domain 1 zinc_ribbon_2 PF13240.6 gi|21227500|ref|NP_633422.1| - 0.0042 16.8 17.1 2.1 8.2 0.5 4.4 4 0 0 4 4 4 1 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21227500|ref|NP_633422.1| - 0.0044 17.1 9.8 1.6 8.9 0.1 4.0 4 0 0 4 4 4 1 Zinc ribbon domain zf_UBZ PF18439.1 gi|21227500|ref|NP_633422.1| - 0.0049 16.4 10.6 0.6 9.8 0.1 4.2 4 0 0 4 4 4 1 Ubiquitin-Binding Zinc Finger zinc-ribbons_6 PF07191.12 gi|21227500|ref|NP_633422.1| - 0.0064 16.5 9.1 0.015 15.3 0.7 2.7 2 1 1 3 3 3 1 zinc-ribbons DZR PF12773.7 gi|21227500|ref|NP_633422.1| - 0.013 15.6 13.7 15 5.7 13.9 2.8 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|21227500|ref|NP_633422.1| - 0.014 14.8 18.2 0.17 11.4 3.1 3.6 3 1 1 4 4 4 0 zinc-ribbon domain zf-ACC PF17848.1 gi|21227500|ref|NP_633422.1| - 0.014 15.4 14.9 3.3 7.9 0.4 4.2 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain FdhE PF04216.12 gi|21227500|ref|NP_633422.1| - 0.034 14.0 0.5 0.034 14.0 0.5 1.5 1 1 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 gi|21227500|ref|NP_633422.1| - 0.054 13.5 9.1 1 9.4 4.9 2.8 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_15 PF17032.5 gi|21227500|ref|NP_633422.1| - 0.06 14.1 0.4 0.06 14.1 0.4 2.9 1 1 0 3 3 3 0 zinc-ribbon family zinc_ribbon_4 PF13717.6 gi|21227500|ref|NP_633422.1| - 0.068 13.1 13.7 0.45 10.5 0.5 4.1 3 1 1 4 4 4 0 zinc-ribbon domain FYVE PF01363.21 gi|21227500|ref|NP_633422.1| - 0.079 13.1 8.4 0.73 10.0 8.4 2.3 1 1 0 1 1 1 0 FYVE zinc finger zinc-ribbon_6 PF10005.9 gi|21227500|ref|NP_633422.1| - 0.085 13.5 5.1 0.38 11.4 5.1 2.0 1 1 0 1 1 1 0 zinc-ribbon domain zf-ZPR1 PF03367.13 gi|21227500|ref|NP_633422.1| - 0.094 12.6 0.0 0.094 12.6 0.0 2.0 3 0 0 3 3 2 0 ZPR1 zinc-finger domain GFA PF04828.14 gi|21227500|ref|NP_633422.1| - 0.15 12.5 11.5 0.29 11.5 0.6 3.7 1 1 2 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme DUF2387 PF09526.10 gi|21227500|ref|NP_633422.1| - 0.16 12.1 4.4 0.19 11.9 0.5 2.2 2 0 0 2 2 2 0 Probable metal-binding protein (DUF2387) Terminase_GpA PF05876.12 gi|21227500|ref|NP_633422.1| - 0.17 10.4 4.6 0.25 9.8 1.4 2.1 2 0 0 2 2 2 0 Phage terminase large subunit (GpA) Rubredoxin_2 PF18073.1 gi|21227500|ref|NP_633422.1| - 0.22 11.3 16.7 2.8 7.7 0.8 3.8 4 0 0 4 4 4 0 Rubredoxin metal binding domain DUF3268 PF11672.8 gi|21227500|ref|NP_633422.1| - 0.27 11.6 4.4 1.5 9.2 0.3 2.3 2 1 0 2 2 2 0 zinc-finger-containing domain zf-SNAP50_C PF12251.8 gi|21227500|ref|NP_633422.1| - 0.27 10.9 4.8 0.8 9.3 0.3 2.2 2 0 0 2 2 2 0 snRNA-activating protein of 50kDa MW C terminal Baculo_LEF5_C PF11792.8 gi|21227500|ref|NP_633422.1| - 0.37 10.5 0.1 0.37 10.5 0.1 3.7 5 0 0 5 5 4 0 Baculoviridae late expression factor 5 C-terminal domain zf-3CxxC_2 PF17180.4 gi|21227500|ref|NP_633422.1| - 0.5 11.1 17.9 10 7.0 0.0 4.1 2 2 2 4 4 4 0 Zinc-binding domain DUF35_N PF12172.8 gi|21227500|ref|NP_633422.1| - 0.5 10.3 10.2 7.4 6.6 1.9 3.6 3 1 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) UPF0547 PF10571.9 gi|21227500|ref|NP_633422.1| - 0.56 10.3 14.0 5.4 7.2 0.2 4.0 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 DUF2752 PF10825.8 gi|21227500|ref|NP_633422.1| - 0.88 9.7 3.6 1.6 8.8 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2752) DNA_RNApol_7kD PF03604.13 gi|21227500|ref|NP_633422.1| - 0.92 9.2 11.2 8.3 6.2 0.3 3.7 3 1 1 4 4 4 0 DNA directed RNA polymerase, 7 kDa subunit A2L_zn_ribbon PF08792.10 gi|21227500|ref|NP_633422.1| - 1.1 9.0 15.0 0.33 10.7 2.3 3.4 3 1 0 3 3 3 0 A2L zinc ribbon domain YhfH PF14149.6 gi|21227500|ref|NP_633422.1| - 1.6 8.8 12.2 9.2 6.3 0.1 3.9 3 1 1 4 4 3 0 YhfH-like protein Zn_ribbon_SprT PF17283.2 gi|21227500|ref|NP_633422.1| - 1.7 8.6 16.0 22 5.1 0.1 3.9 3 1 0 3 3 3 0 SprT-like zinc ribbon domain zf-IS66 PF13005.7 gi|21227500|ref|NP_633422.1| - 1.8 9.0 6.4 26 5.3 0.0 3.5 4 0 0 4 4 4 0 zinc-finger binding domain of transposase IS66 zf-Mss51 PF13824.6 gi|21227500|ref|NP_633422.1| - 3.2 7.9 14.8 6.4 7.0 1.7 3.4 2 2 1 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 DiS_P_DiS PF06750.13 gi|21227500|ref|NP_633422.1| - 3.7 7.7 5.9 21 5.3 0.0 3.2 3 1 1 4 4 4 0 Bacterial Peptidase A24 N-terminal domain C1_2 PF03107.16 gi|21227500|ref|NP_633422.1| - 3.9 7.9 12.6 0.64 10.4 1.4 2.8 2 1 0 2 2 2 0 C1 domain NUDIX PF00293.28 gi|21227501|ref|NP_633423.1| - 6.2e-20 71.6 0.0 7.5e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 gi|21227501|ref|NP_633423.1| - 0.011 15.3 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) z-alpha PF02295.17 gi|21227501|ref|NP_633423.1| - 0.14 12.2 0.0 0.31 11.1 0.0 1.5 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain Exosortase_EpsH PF09721.10 gi|21227503|ref|NP_633425.1| - 2.4e-11 43.7 13.6 5.6e-11 42.5 13.6 1.6 1 1 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) PS_Dcarbxylase PF02666.15 gi|21227504|ref|NP_633426.1| - 7.8e-29 100.6 1.8 2.9e-24 85.8 0.4 2.1 1 1 1 2 2 2 2 Phosphatidylserine decarboxylase RnfC_N PF13375.6 gi|21227504|ref|NP_633426.1| - 0.0042 17.0 0.9 7.6 6.6 0.0 3.8 1 1 3 4 4 4 1 RnfC Barrel sandwich hybrid domain Peptidase_M23 PF01551.22 gi|21227504|ref|NP_633426.1| - 0.018 15.3 0.8 6.6 7.0 0.2 3.3 1 1 1 2 2 2 0 Peptidase family M23 HlyD_3 PF13437.6 gi|21227504|ref|NP_633426.1| - 0.24 12.1 1.0 9.9 6.9 0.0 3.1 3 1 1 4 4 4 0 HlyD family secretion protein CDP-OH_P_transf PF01066.21 gi|21227505|ref|NP_633427.1| - 3.2e-13 50.2 0.7 3.2e-13 50.2 0.7 3.0 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DHNA PF04038.12 gi|21227506|ref|NP_633428.1| - 1.3e-45 154.4 0.0 1.5e-45 154.2 0.0 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase Aminotran_1_2 PF00155.21 gi|21227507|ref|NP_633429.1| - 4.3e-62 210.4 0.0 4.8e-62 210.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|21227507|ref|NP_633429.1| - 2.2e-11 43.7 0.0 3e-11 43.2 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|21227507|ref|NP_633429.1| - 5.1e-07 29.0 0.0 2.8e-06 26.5 0.0 1.9 2 0 0 2 2 2 1 Aminotransferase class-V Alliinase_C PF04864.13 gi|21227507|ref|NP_633429.1| - 0.00037 19.5 0.0 0.00065 18.7 0.0 1.3 1 0 0 1 1 1 1 Allinase Cys_Met_Meta_PP PF01053.20 gi|21227507|ref|NP_633429.1| - 0.0033 16.0 0.0 0.0052 15.4 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_3 PF00202.21 gi|21227508|ref|NP_633430.1| - 8.6e-120 400.1 0.4 1e-119 399.9 0.4 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|21227508|ref|NP_633430.1| - 3.6e-06 26.4 0.0 5.9e-06 25.7 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|21227508|ref|NP_633430.1| - 4.7e-05 22.8 0.1 0.00012 21.5 0.1 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|21227508|ref|NP_633430.1| - 0.00018 20.9 1.8 0.00024 20.5 1.1 1.6 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|21227508|ref|NP_633430.1| - 0.0022 16.6 0.0 0.0033 16.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DUF3109 PF11307.8 gi|21227508|ref|NP_633430.1| - 0.094 12.5 0.3 0.17 11.7 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3109) Bactofilin PF04519.13 gi|21227509|ref|NP_633431.1| - 1.1e-06 28.9 18.1 2.1e-05 24.7 4.5 3.6 2 2 0 2 2 2 2 Polymer-forming cytoskeletal Hexapep PF00132.24 gi|21227509|ref|NP_633431.1| - 3.6e-06 26.5 0.0 3.6e-06 26.5 0.0 6.5 7 2 1 8 8 8 2 Bacterial transferase hexapeptide (six repeats) Phage_spike PF18715.1 gi|21227509|ref|NP_633431.1| - 0.27 11.3 4.4 11 6.2 0.0 3.2 3 1 0 3 3 3 0 Phage spike trimer MinC_C PF03775.16 gi|21227509|ref|NP_633431.1| - 2.7 8.0 7.2 1.3 9.1 0.7 2.9 3 0 0 3 3 3 0 Septum formation inhibitor MinC, C-terminal domain TGT_C2 PF14810.6 gi|21227510|ref|NP_633432.1| - 2.3e-28 98.1 0.1 4.5e-28 97.2 0.1 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|21227510|ref|NP_633432.1| - 3.9e-14 52.4 0.2 9e-14 51.2 0.1 1.7 2 0 0 2 2 2 1 PUA domain UPF0113 PF03657.13 gi|21227510|ref|NP_633432.1| - 0.0088 16.3 0.0 0.014 15.6 0.0 1.4 1 0 0 1 1 1 1 UPF0113 PUA domain AbrB_C PF18277.1 gi|21227510|ref|NP_633432.1| - 0.067 12.8 0.1 8.8 6.1 0.0 2.9 2 1 1 3 3 3 0 AbrB C-terminal domain SUKH_5 PF14567.6 gi|21227513|ref|NP_633435.1| - 0.074 12.8 0.2 0.41 10.4 0.1 2.0 2 0 0 2 2 2 0 SMI1-KNR4 cell-wall BPL_N PF09825.9 gi|21227514|ref|NP_633436.1| - 0.032 13.3 0.0 0.049 12.7 0.0 1.2 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF1894 PF08979.11 gi|21227515|ref|NP_633437.1| - 1.3e-27 96.0 0.1 1.5e-27 95.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) DUF1890 PF09001.11 gi|21227516|ref|NP_633438.1| - 3.8e-56 189.3 0.2 4.3e-56 189.2 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1890) B12-binding PF02310.19 gi|21227516|ref|NP_633438.1| - 0.14 12.2 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain DUF1894 PF08979.11 gi|21227517|ref|NP_633439.1| - 7.2e-35 119.2 0.2 8.6e-35 119.0 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) AIRS_C PF02769.22 gi|21227518|ref|NP_633440.1| - 6.4e-19 68.6 0.0 1.4e-18 67.5 0.0 1.6 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|21227518|ref|NP_633440.1| - 7.1e-15 55.4 0.2 1.2e-14 54.7 0.2 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain S4 PF01479.25 gi|21227518|ref|NP_633440.1| - 0.046 13.4 0.4 0.12 12.1 0.4 1.7 1 0 0 1 1 1 0 S4 domain Copper-fist PF00649.18 gi|21227518|ref|NP_633440.1| - 0.08 12.4 0.4 0.16 11.5 0.4 1.4 1 0 0 1 1 1 0 Copper fist DNA binding domain AA_kinase PF00696.28 gi|21227519|ref|NP_633441.1| - 1.6e-50 171.9 1.9 2.1e-50 171.6 0.1 1.9 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.6 gi|21227519|ref|NP_633441.1| - 4.2e-25 87.3 3.2 3.5e-12 45.9 0.1 2.5 2 0 0 2 2 2 2 ACT domain ACT PF01842.25 gi|21227519|ref|NP_633441.1| - 2e-22 78.6 0.7 1e-10 41.2 0.1 2.5 2 0 0 2 2 2 2 ACT domain ACT_6 PF13740.6 gi|21227519|ref|NP_633441.1| - 0.00038 20.4 1.7 0.03 14.3 0.1 3.4 3 0 0 3 3 3 1 ACT domain PPK2 PF03976.14 gi|21227519|ref|NP_633441.1| - 0.017 14.6 0.1 3.8 7.0 0.0 2.4 1 1 1 2 2 2 0 Polyphosphate kinase 2 (PPK2) PhosphMutase PF10143.9 gi|161485676|ref|NP_633442.2| - 3.7e-59 199.4 0.0 5.4e-59 198.9 0.0 1.2 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|161485676|ref|NP_633442.2| - 2.4e-37 128.6 0.0 2.7e-37 128.5 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Alk_phosphatase PF00245.20 gi|161485676|ref|NP_633442.2| - 0.016 14.2 0.1 0.044 12.7 0.0 1.6 2 0 0 2 2 2 0 Alkaline phosphatase Oxidored_FMN PF00724.20 gi|161485676|ref|NP_633442.2| - 0.19 11.0 0.2 0.33 10.2 0.2 1.3 1 0 0 1 1 1 0 NADH:flavin oxidoreductase / NADH oxidase family HSP20 PF00011.21 gi|21227521|ref|NP_633443.1| - 6.8e-21 74.3 0.7 8.3e-21 74.1 0.7 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|21227521|ref|NP_633443.1| - 4.9e-10 38.8 0.0 6.9e-10 38.3 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|21227521|ref|NP_633443.1| - 0.00028 21.8 0.0 0.00042 21.3 0.0 1.3 1 0 0 1 1 1 1 CS domain GvpH PF05455.11 gi|21227521|ref|NP_633443.1| - 0.031 14.3 0.0 0.045 13.8 0.0 1.4 1 0 0 1 1 1 0 GvpH Peripla_BP_2 PF01497.18 gi|21227522|ref|NP_633444.1| - 0.019 14.6 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein DUF3775 PF12616.8 gi|21227522|ref|NP_633444.1| - 0.1 12.6 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3775) F420_ligase PF01996.16 gi|21227523|ref|NP_633445.1| - 3.2e-62 210.1 0.0 3.9e-62 209.8 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Cupin_2 PF07883.11 gi|21227524|ref|NP_633446.1| - 2.3e-07 30.4 0.0 3.3e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Cupin domain EutQ PF06249.12 gi|21227524|ref|NP_633446.1| - 0.0021 17.8 0.1 0.0024 17.6 0.1 1.3 1 1 0 1 1 1 1 Ethanolamine utilisation protein EutQ AraC_binding PF02311.19 gi|21227524|ref|NP_633446.1| - 0.034 14.1 0.0 0.043 13.7 0.0 1.1 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_6 PF12852.7 gi|21227524|ref|NP_633446.1| - 0.11 12.2 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Cupin Ppnp PF06865.11 gi|21227524|ref|NP_633446.1| - 0.12 12.8 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Pyrimidine/purine nucleoside phosphorylase DUF1796 PF08795.10 gi|21227524|ref|NP_633446.1| - 0.21 11.5 0.0 0.3 11.0 0.0 1.2 1 0 0 1 1 1 0 Putative papain-like cysteine peptidase (DUF1796) dCMP_cyt_deam_1 PF00383.23 gi|21227525|ref|NP_633447.1| - 6.1e-30 103.1 1.4 7.5e-30 102.8 1.4 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|21227525|ref|NP_633447.1| - 1e-19 70.6 0.1 1.3e-19 70.3 0.1 1.0 1 0 0 1 1 1 1 MafB19-like deaminase Bd3614-deam PF14439.6 gi|21227525|ref|NP_633447.1| - 0.0014 18.7 0.6 0.0033 17.5 0.6 1.6 1 1 1 2 2 2 1 Bd3614-like deaminase APOBEC_N PF08210.11 gi|21227525|ref|NP_633447.1| - 0.006 16.5 0.7 0.01 15.8 0.8 1.4 1 1 0 1 1 1 1 APOBEC-like N-terminal domain OTT_1508_deam PF14441.6 gi|21227525|ref|NP_633447.1| - 0.047 13.7 0.2 0.075 13.1 0.2 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase zf-C3HC4 PF00097.25 gi|21227525|ref|NP_633447.1| - 0.077 12.9 3.5 0.23 11.3 3.5 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) XOO_2897-deam PF14440.6 gi|21227525|ref|NP_633447.1| - 0.082 13.0 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase APOBEC3 PF18771.1 gi|21227525|ref|NP_633447.1| - 0.13 12.4 0.2 0.17 12.0 0.2 1.2 1 0 0 1 1 1 0 APOBEC3 SNAD4 PF18750.1 gi|21227525|ref|NP_633447.1| - 0.15 12.2 0.2 0.22 11.7 0.2 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 NAD1 PF18778.1 gi|21227525|ref|NP_633447.1| - 0.2 11.7 0.5 0.28 11.3 0.5 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 SecD_SecF PF02355.16 gi|21227526|ref|NP_633448.1| - 2.9e-34 118.1 11.8 4.3e-34 117.5 11.8 1.2 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|21227526|ref|NP_633448.1| - 0.0015 18.0 0.4 0.0037 16.7 0.1 1.9 2 0 0 2 2 2 1 SecD/SecF GG Motif Patched PF02460.18 gi|21227526|ref|NP_633448.1| - 0.041 12.0 14.2 0.064 11.3 14.2 1.2 1 0 0 1 1 1 0 Patched family SecD_SecF PF02355.16 gi|21227527|ref|NP_633449.1| - 3.6e-14 52.6 7.6 6.2e-14 51.8 7.6 1.2 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|21227527|ref|NP_633449.1| - 0.053 13.0 0.5 0.34 10.5 0.2 2.5 2 0 0 2 2 2 0 SecD/SecF GG Motif DNA_pol3_delta2 PF13177.6 gi|21227528|ref|NP_633450.1| - 5.4e-15 55.6 0.0 7.5e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 gi|21227528|ref|NP_633450.1| - 1.1e-13 51.3 0.1 3.7e-13 49.7 0.1 1.9 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|21227528|ref|NP_633450.1| - 7.8e-11 42.5 0.0 1.7e-10 41.5 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|21227528|ref|NP_633450.1| - 6.8e-05 22.9 0.1 0.00035 20.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|21227528|ref|NP_633450.1| - 0.00033 21.0 0.0 0.0011 19.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|21227528|ref|NP_633450.1| - 0.00051 19.8 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 gi|21227528|ref|NP_633450.1| - 0.0013 19.0 1.7 0.0082 16.5 0.2 2.5 2 0 0 2 2 2 1 AAA C-terminal domain DNA_pol3_delta PF06144.13 gi|21227528|ref|NP_633450.1| - 0.0014 18.5 0.0 0.0072 16.1 0.0 2.0 2 0 0 2 2 2 1 DNA polymerase III, delta subunit ATPase_2 PF01637.18 gi|21227528|ref|NP_633450.1| - 0.0014 18.6 0.0 0.004 17.1 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|21227528|ref|NP_633450.1| - 0.002 18.5 0.5 0.014 15.8 0.5 2.4 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 gi|21227528|ref|NP_633450.1| - 0.0043 16.8 0.2 0.25 11.1 0.0 3.1 2 1 1 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 gi|21227528|ref|NP_633450.1| - 0.0066 15.7 0.0 0.015 14.6 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain Rad17 PF03215.15 gi|21227528|ref|NP_633450.1| - 0.0081 16.1 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_25 PF13481.6 gi|21227528|ref|NP_633450.1| - 0.022 14.4 0.0 0.12 12.0 0.0 2.3 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|21227528|ref|NP_633450.1| - 0.036 14.5 0.0 0.068 13.6 0.0 1.5 1 0 0 1 1 1 0 RNA helicase CLP1_P PF16575.5 gi|21227528|ref|NP_633450.1| - 0.04 13.7 0.0 4.7 6.9 0.0 2.2 1 1 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_23 PF13476.6 gi|21227528|ref|NP_633450.1| - 0.053 14.0 0.4 0.092 13.2 0.4 1.8 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|21227528|ref|NP_633450.1| - 0.1 13.1 0.0 0.27 11.8 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|21227528|ref|NP_633450.1| - 0.12 12.5 0.0 0.31 11.2 0.0 1.7 1 1 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 gi|21227528|ref|NP_633450.1| - 0.14 12.3 0.0 0.68 10.0 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain Peptidase_C39_2 PF13529.6 gi|21227529|ref|NP_633451.1| - 0.007 16.9 0.7 0.027 15.0 0.7 1.9 1 1 0 1 1 1 1 Peptidase_C39 like family UPF0228 PF05727.11 gi|21227530|ref|NP_633452.1| - 3.1e-39 133.6 6.1 3.7e-39 133.4 4.2 1.8 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0228) DIX PF00778.17 gi|21227530|ref|NP_633452.1| - 0.013 15.3 0.2 0.032 14.0 0.2 1.7 1 0 0 1 1 1 0 DIX domain RE_LlaMI PF09562.10 gi|21227530|ref|NP_633452.1| - 0.017 14.7 2.3 0.042 13.4 2.0 1.8 1 1 0 1 1 1 0 LlaMI restriction endonuclease HTH_19 PF12844.7 gi|21227530|ref|NP_633452.1| - 0.048 13.7 0.1 1.6 8.8 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain DDE_Tnp_1 PF01609.21 gi|21227531|ref|NP_633453.1| - 5.3e-09 36.0 5.2 6.5e-09 35.7 5.2 1.0 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.6 gi|21227531|ref|NP_633453.1| - 0.041 14.2 2.4 0.074 13.4 2.4 1.5 1 1 0 1 1 1 0 Transposase DDE domain Transposase_20 PF02371.16 gi|21227532|ref|NP_633454.1| - 5.8e-29 100.2 0.0 8.4e-29 99.7 0.0 1.2 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family 5_3_exonuc PF01367.20 gi|21227532|ref|NP_633454.1| - 0.027 15.1 0.9 0.96 10.1 0.9 2.4 1 1 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold DEDD_Tnp_IS110 PF01548.17 gi|21227533|ref|NP_633455.1| - 2.6e-20 72.9 0.2 4.3e-20 72.2 0.2 1.3 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.12 gi|21227533|ref|NP_633455.1| - 0.011 16.0 0.0 0.029 14.7 0.0 1.7 1 0 0 1 1 1 0 Orthopoxvirus F14 protein DUF2583 PF10762.9 gi|21227536|ref|NP_633458.1| - 0.0026 18.1 0.7 0.0034 17.8 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2583) AA_permease PF00324.21 gi|21227537|ref|NP_633459.1| - 4.4e-39 134.4 44.9 5.6e-39 134.0 44.9 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|21227537|ref|NP_633459.1| - 4.8e-21 75.1 47.3 1.6e-20 73.4 47.2 1.7 1 1 1 2 2 2 1 Amino acid permease Herpes_LMP1 PF05297.11 gi|21227537|ref|NP_633459.1| - 0.24 10.5 13.3 0.032 13.5 3.7 3.0 3 0 0 3 3 3 0 Herpesvirus latent membrane protein 1 (LMP1) MtmB PF05369.12 gi|21227538|ref|NP_633460.1| - 4.7e-129 431.1 2.5 5.2e-129 431.0 2.5 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB MtmB PF05369.12 gi|21227539|ref|NP_633461.1| - 5.2e-89 299.1 0.0 5.8e-89 298.9 0.0 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB B12-binding_2 PF02607.17 gi|21227540|ref|NP_633462.1| - 2.4e-21 75.9 0.0 5.7e-21 74.7 0.0 1.7 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.19 gi|21227540|ref|NP_633462.1| - 7.2e-15 55.1 0.2 1.4e-14 54.2 0.2 1.4 1 0 0 1 1 1 1 B12 binding domain RsbU_N PF08673.10 gi|21227540|ref|NP_633462.1| - 0.072 13.2 0.0 0.2 11.8 0.0 1.9 1 0 0 1 1 1 0 Phosphoserine phosphatase RsbU, N-terminal domain URO-D PF01208.17 gi|21227541|ref|NP_633463.1| - 6.5e-81 272.2 0.1 7.3e-81 272.0 0.1 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Flot PF15975.5 gi|21227541|ref|NP_633463.1| - 0.0064 16.7 1.0 0.021 15.0 0.1 2.2 2 1 0 2 2 2 1 Flotillin RACo_C_ter PF14574.6 gi|21227542|ref|NP_633464.1| - 3.2e-72 242.7 2.2 9.6e-72 241.1 2.2 1.7 1 1 0 1 1 1 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|21227542|ref|NP_633464.1| - 1.4e-10 41.1 0.0 3e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 RACo middle region Fer4 PF00037.27 gi|21227542|ref|NP_633464.1| - 3e-10 39.5 9.6 1.4e-05 24.7 2.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21227542|ref|NP_633464.1| - 1.5e-08 34.3 11.7 1.9e-06 27.7 1.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21227542|ref|NP_633464.1| - 1.5e-08 34.6 10.6 2.8e-08 33.7 10.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227542|ref|NP_633464.1| - 5.2e-08 33.4 11.6 1e-07 32.5 11.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227542|ref|NP_633464.1| - 3.9e-07 30.1 11.8 6.5e-07 29.4 11.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227542|ref|NP_633464.1| - 2.4e-06 28.4 12.4 0.013 16.4 4.2 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|21227542|ref|NP_633464.1| - 5.5e-06 26.4 12.8 2.4e-05 24.3 13.2 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227542|ref|NP_633464.1| - 7.9e-06 25.7 10.9 0.0012 18.9 2.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21227542|ref|NP_633464.1| - 0.0047 17.8 15.4 0.3 12.1 3.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21227542|ref|NP_633464.1| - 0.044 14.2 13.8 0.25 11.8 13.9 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227542|ref|NP_633464.1| - 0.12 12.9 13.8 0.46 11.1 4.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21227542|ref|NP_633464.1| - 1 9.9 15.6 2.6 8.6 5.3 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21227542|ref|NP_633464.1| - 3.3 7.9 11.3 2.7 8.2 1.9 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21227542|ref|NP_633464.1| - 6.1 7.5 12.8 35 5.0 12.8 2.1 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Pyrophosphatase PF00719.19 gi|161485675|ref|NP_633465.2| - 3.1e-55 186.4 0.1 3.5e-55 186.2 0.1 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase NAD_binding_2 PF03446.15 gi|21227544|ref|NP_633466.1| - 0.0021 18.2 0.0 0.0049 17.0 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|21227544|ref|NP_633466.1| - 0.056 13.0 0.0 0.097 12.2 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Mur_ligase PF01225.25 gi|21227544|ref|NP_633466.1| - 0.074 13.4 0.3 2.9 8.3 0.0 2.3 1 1 1 2 2 2 0 Mur ligase family, catalytic domain ATP-grasp_3 PF02655.14 gi|21227545|ref|NP_633467.1| - 2.4e-08 34.2 0.0 4.4e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|21227545|ref|NP_633467.1| - 0.00032 20.3 0.0 0.00058 19.5 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|21227545|ref|NP_633467.1| - 0.0015 18.3 0.0 0.0054 16.5 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_4 PF13535.6 gi|21227545|ref|NP_633467.1| - 0.055 13.1 1.1 7.2 6.2 0.4 2.4 1 1 1 2 2 2 0 ATP-grasp domain GIDA PF01134.22 gi|21227545|ref|NP_633467.1| - 0.11 11.6 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|21227545|ref|NP_633467.1| - 0.18 12.1 0.0 0.44 10.8 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Radical_SAM PF04055.21 gi|21227546|ref|NP_633468.1| - 1.9e-09 38.1 0.5 6.8e-09 36.3 0.2 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|21227546|ref|NP_633468.1| - 0.00042 20.4 0.2 0.00077 19.6 0.2 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|21227546|ref|NP_633468.1| - 0.004 17.4 0.2 0.0071 16.6 0.2 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain BATS PF06968.13 gi|21227546|ref|NP_633468.1| - 0.031 14.4 0.2 0.14 12.3 0.0 2.1 3 0 0 3 3 3 0 Biotin and Thiamin Synthesis associated domain tRNA-synt_2d PF01409.20 gi|21227547|ref|NP_633469.1| - 3.3e-11 43.1 0.0 8.6e-10 38.5 0.0 2.4 1 1 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 gi|21227547|ref|NP_633469.1| - 1.5e-07 30.9 0.2 7.7e-07 28.5 0.0 2.2 3 0 0 3 3 3 1 tRNA synthetases class II (D, K and N) tRNA_synthFbeta PF17759.1 gi|21227547|ref|NP_633469.1| - 1.2e-06 28.1 0.0 4.5e-06 26.2 0.0 1.8 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2b PF00587.25 gi|21227547|ref|NP_633469.1| - 2.2e-05 24.5 0.0 6.9e-05 22.9 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) SQHop_cyclase_C PF13243.6 gi|21227549|ref|NP_633471.1| - 1.7e-05 24.1 1.4 0.00082 18.6 0.2 2.6 1 1 1 2 2 2 2 Squalene-hopene cyclase C-terminal domain Prenyltrans PF00432.21 gi|21227549|ref|NP_633471.1| - 0.042 13.6 6.4 5.3 6.9 1.8 4.6 3 1 0 3 3 3 0 Prenyltransferase and squalene oxidase repeat GARP PF16731.5 gi|21227549|ref|NP_633471.1| - 0.21 11.3 0.0 0.37 10.5 0.0 1.4 1 0 0 1 1 1 0 Glutamic acid/alanine-rich protein of Trypanosoma DUF134 PF02001.16 gi|21227550|ref|NP_633472.1| - 6.2e-20 71.6 0.0 8.2e-20 71.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4_2 PF08281.12 gi|21227550|ref|NP_633472.1| - 1.4e-05 24.7 0.4 2.5e-05 23.8 0.4 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|21227550|ref|NP_633472.1| - 0.00038 19.9 0.2 0.00057 19.3 0.2 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_37 PF13744.6 gi|21227550|ref|NP_633472.1| - 0.00064 19.6 0.1 0.00097 19.0 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|21227550|ref|NP_633472.1| - 0.0097 15.7 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_30 PF13556.6 gi|21227550|ref|NP_633472.1| - 0.02 14.7 0.1 0.032 14.0 0.1 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_28 PF13518.6 gi|21227550|ref|NP_633472.1| - 0.024 14.7 0.0 0.045 13.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF5320 PF17253.2 gi|21227550|ref|NP_633472.1| - 0.027 15.5 13.3 0.027 15.5 13.3 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5320) DUF2857 PF11198.8 gi|21227550|ref|NP_633472.1| - 0.038 13.8 0.1 0.051 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) MarR_2 PF12802.7 gi|21227550|ref|NP_633472.1| - 0.045 13.7 0.1 0.074 13.0 0.1 1.3 1 0 0 1 1 1 0 MarR family HTH_29 PF13551.6 gi|21227550|ref|NP_633472.1| - 0.052 13.6 0.0 0.052 13.6 0.0 1.9 2 0 0 2 2 1 0 Winged helix-turn helix Sigma70_ECF PF07638.11 gi|21227550|ref|NP_633472.1| - 0.073 13.0 0.2 0.098 12.5 0.2 1.2 1 0 0 1 1 1 0 ECF sigma factor HTH_1 PF00126.27 gi|21227550|ref|NP_633472.1| - 0.086 12.8 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_10 PF04967.12 gi|21227550|ref|NP_633472.1| - 0.16 11.8 0.1 0.29 11.0 0.1 1.4 1 0 0 1 1 1 0 HTH DNA binding domain HypA PF01155.19 gi|21227550|ref|NP_633472.1| - 2.5 8.2 6.5 1.5 8.9 4.3 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF5320 PF17253.2 gi|21227551|ref|NP_633473.1| - 3.6e-23 82.5 24.5 2.1e-22 80.0 24.5 1.8 1 1 0 1 1 1 1 Family of unknown function (DUF5320) Radical_SAM PF04055.21 gi|21227552|ref|NP_633474.1| - 1e-12 48.8 0.1 2.2e-12 47.6 0.1 1.6 1 0 0 1 1 1 1 Radical SAM superfamily FliG_N PF14842.6 gi|21227552|ref|NP_633474.1| - 0.0025 18.3 0.1 0.16 12.5 0.0 2.9 3 0 0 3 3 3 1 FliG N-terminal domain Usp PF00582.26 gi|21227553|ref|NP_633475.1| - 1.5e-28 100.1 0.0 1.9e-28 99.7 0.0 1.2 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.26 gi|21227554|ref|NP_633476.1| - 1.4e-73 246.0 6.1 9.4e-37 126.7 0.5 2.0 2 0 0 2 2 2 2 Universal stress protein family Toprim_4 PF13662.6 gi|21227554|ref|NP_633476.1| - 0.00012 22.5 0.6 0.36 11.3 0.0 2.9 3 0 0 3 3 3 2 Toprim domain GARS_N PF02844.15 gi|21227554|ref|NP_633476.1| - 0.00014 22.6 0.2 1.2 9.9 0.0 2.6 2 1 0 2 2 2 2 Phosphoribosylglycinamide synthetase, N domain B12-binding PF02310.19 gi|21227554|ref|NP_633476.1| - 0.0011 19.0 0.3 1.9 8.5 0.0 2.4 2 0 0 2 2 2 2 B12 binding domain Nitro_FeMo-Co PF02579.17 gi|21227554|ref|NP_633476.1| - 0.0033 17.7 2.9 1.2 9.5 0.1 3.7 2 2 0 2 2 2 1 Dinitrogenase iron-molybdenum cofactor DAGK_cat PF00781.24 gi|21227554|ref|NP_633476.1| - 0.0034 17.0 0.6 0.89 9.2 0.1 2.3 2 0 0 2 2 2 2 Diacylglycerol kinase catalytic domain HGD-D PF06050.13 gi|21227554|ref|NP_633476.1| - 0.0037 17.1 0.0 1.9 8.1 0.0 2.2 1 1 0 2 2 2 2 2-hydroxyglutaryl-CoA dehydratase, D-component PGM_PMM_I PF02878.16 gi|21227554|ref|NP_633476.1| - 0.0072 16.0 0.1 5.1 6.8 0.0 2.8 2 0 0 2 2 2 2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PAC2 PF09754.9 gi|21227554|ref|NP_633476.1| - 0.037 14.0 0.1 7.9 6.4 0.0 2.3 2 0 0 2 2 2 0 PAC2 family NIF3 PF01784.18 gi|21227554|ref|NP_633476.1| - 0.049 13.2 0.4 9 5.8 0.0 2.5 2 0 0 2 2 2 0 NIF3 (NGG1p interacting factor 3) CoA_binding_3 PF13727.6 gi|21227554|ref|NP_633476.1| - 0.071 13.1 0.4 13 5.8 0.0 2.3 2 0 0 2 2 2 0 CoA-binding domain DUF3090 PF11290.8 gi|21227554|ref|NP_633476.1| - 0.096 12.5 0.1 6.3 6.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3090) Usp PF00582.26 gi|21227555|ref|NP_633477.1| - 1.1e-35 123.2 0.1 1.2e-35 123.0 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|21227555|ref|NP_633477.1| - 0.021 14.8 0.0 0.025 14.6 0.0 1.1 1 0 0 1 1 1 0 DNA photolyase Nitro_FeMo-Co PF02579.17 gi|21227555|ref|NP_633477.1| - 0.083 13.2 0.1 0.25 11.7 0.1 1.9 1 1 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor Usp PF00582.26 gi|21227556|ref|NP_633478.1| - 1.1e-35 123.2 0.0 1.3e-35 122.9 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF4975 PF16346.5 gi|21227556|ref|NP_633478.1| - 0.12 12.4 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4975) Usp PF00582.26 gi|21227557|ref|NP_633479.1| - 1.9e-35 122.4 0.2 2.2e-35 122.2 0.2 1.1 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|21227557|ref|NP_633479.1| - 0.025 14.6 0.0 0.031 14.3 0.0 1.2 1 0 0 1 1 1 0 DNA photolyase Usp PF00582.26 gi|21227558|ref|NP_633480.1| - 3e-35 121.8 0.1 3.4e-35 121.6 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family Nitro_FeMo-Co PF02579.17 gi|21227558|ref|NP_633480.1| - 0.049 14.0 0.1 0.25 11.7 0.0 2.0 1 1 1 2 2 2 0 Dinitrogenase iron-molybdenum cofactor TfuA PF07812.12 gi|21227559|ref|NP_633481.1| - 7.3e-46 154.8 0.0 1.6e-45 153.6 0.0 1.6 1 0 0 1 1 1 1 TfuA-like protein SHOCT PF09851.9 gi|21227559|ref|NP_633481.1| - 0.25 11.1 2.4 1.9 8.3 1.1 2.7 2 0 0 2 2 2 0 Short C-terminal domain YcaO PF02624.16 gi|21227560|ref|NP_633482.1| - 7.3e-83 278.5 0.0 8.8e-83 278.2 0.0 1.1 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding DUF2892 PF11127.8 gi|21227561|ref|NP_633483.1| - 4.5e-12 45.8 0.1 5.4e-12 45.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Glucos_trans_II PF14264.6 gi|21227561|ref|NP_633483.1| - 0.013 14.9 1.2 0.013 14.9 1.2 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII Terminase_GpA PF05876.12 gi|21227562|ref|NP_633484.1| - 0.0042 15.7 0.9 0.0042 15.7 0.9 1.0 1 0 0 1 1 1 1 Phage terminase large subunit (GpA) zf-C2H2_4 PF13894.6 gi|21227562|ref|NP_633484.1| - 0.0072 17.1 1.9 0.5 11.3 0.2 2.6 2 0 0 2 2 2 1 C2H2-type zinc finger zf-ribbon_3 PF13248.6 gi|21227562|ref|NP_633484.1| - 0.011 15.1 2.9 2.5 7.7 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-RING_4 PF14570.6 gi|21227562|ref|NP_633484.1| - 0.011 15.5 4.2 0.49 10.2 0.5 2.8 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain zf-Di19 PF05605.12 gi|21227562|ref|NP_633484.1| - 0.014 15.7 1.9 0.39 11.1 0.1 2.2 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zinc_ribbon_2 PF13240.6 gi|21227562|ref|NP_633484.1| - 0.037 13.7 4.1 1.1 9.1 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DUF4451 PF14616.6 gi|21227562|ref|NP_633484.1| - 0.038 14.2 2.4 3.4 7.9 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4451) zf-H2C2_2 PF13465.6 gi|21227562|ref|NP_633484.1| - 0.055 13.9 3.0 0.37 11.3 0.5 2.4 2 0 0 2 2 2 0 Zinc-finger double domain Thioredoxin_4 PF13462.6 gi|21227562|ref|NP_633484.1| - 0.071 13.3 3.0 3.4 7.8 0.5 2.1 1 1 0 2 2 2 0 Thioredoxin Pox_F17 PF04767.12 gi|21227562|ref|NP_633484.1| - 0.072 13.6 0.6 0.077 13.5 0.6 1.1 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein zf-C2H2_jaz PF12171.8 gi|21227562|ref|NP_633484.1| - 0.11 12.8 3.0 0.56 10.6 0.1 2.9 2 1 1 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-UDP PF14569.6 gi|21227562|ref|NP_633484.1| - 0.18 11.9 3.8 1.4 9.0 3.8 2.1 1 1 0 1 1 1 0 Zinc-binding RING-finger Zn_Tnp_IS1595 PF12760.7 gi|21227562|ref|NP_633484.1| - 0.25 11.4 4.6 2.1 8.4 0.1 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DZR PF12773.7 gi|21227562|ref|NP_633484.1| - 0.27 11.3 4.8 1.2 9.2 3.2 2.1 1 1 1 2 2 2 0 Double zinc ribbon zinc_ribbon_5 PF13719.6 gi|21227562|ref|NP_633484.1| - 1.4 8.7 5.7 4.1 7.2 0.5 2.6 2 1 0 2 2 2 0 zinc-ribbon domain Thioredoxin_3 PF13192.6 gi|21227562|ref|NP_633484.1| - 2.3 8.3 4.5 17 5.5 1.0 2.2 1 1 1 2 2 2 0 Thioredoxin domain Cation_ATPase_C PF00689.21 gi|21227563|ref|NP_633485.1| - 3.8e-53 179.9 5.3 3.8e-53 179.9 5.3 2.4 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus E1-E2_ATPase PF00122.20 gi|21227563|ref|NP_633485.1| - 1.8e-52 177.5 7.4 1.8e-52 177.5 7.4 3.1 3 0 0 3 3 3 2 E1-E2 ATPase Hydrolase PF00702.26 gi|21227563|ref|NP_633485.1| - 3.3e-25 89.6 2.3 8.1e-25 88.3 2.3 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|21227563|ref|NP_633485.1| - 4.6e-22 77.9 0.0 9e-22 77.0 0.0 1.4 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|21227563|ref|NP_633485.1| - 2.8e-21 75.0 0.0 5.9e-21 73.9 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus HAD PF12710.7 gi|21227563|ref|NP_633485.1| - 4.1e-05 24.1 0.2 0.00023 21.6 0.1 2.4 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|21227563|ref|NP_633485.1| - 6.8e-05 22.7 0.4 0.0034 17.2 0.5 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase LPG_synthase_TM PF03706.13 gi|21227564|ref|NP_633486.1| - 0.0048 16.5 2.4 0.0056 16.2 2.4 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region PhoR PF11808.8 gi|21227564|ref|NP_633486.1| - 0.085 13.3 0.0 0.085 13.3 0.0 2.0 3 0 0 3 3 3 0 Phosphate regulon sensor protein PhoR TspO_MBR PF03073.15 gi|21227564|ref|NP_633486.1| - 0.47 10.5 6.5 0.32 11.0 0.6 2.1 2 0 0 2 2 2 0 TspO/MBR family DUF2207 PF09972.9 gi|21227564|ref|NP_633486.1| - 7.9 5.1 12.6 2.2e+02 0.4 12.6 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) E1-E2_ATPase PF00122.20 gi|21227565|ref|NP_633487.1| - 2.5e-51 173.8 5.2 2.5e-51 173.8 5.2 1.9 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|21227565|ref|NP_633487.1| - 2.4e-38 132.6 0.4 4.7e-38 131.6 0.4 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|21227565|ref|NP_633487.1| - 0.0004 20.2 0.1 0.0018 18.1 0.2 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase FlbD PF06289.11 gi|21227565|ref|NP_633487.1| - 0.019 14.6 0.1 0.085 12.5 0.0 2.1 2 0 0 2 2 2 0 Flagellar and Swarming motility proteins HAD PF12710.7 gi|21227565|ref|NP_633487.1| - 0.12 12.8 0.0 0.27 11.6 0.0 1.6 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase ProQ_C PF17516.2 gi|21227565|ref|NP_633487.1| - 1.4 8.4 5.1 0.3 10.5 0.4 2.2 3 0 0 3 3 3 0 ProQ C-terminal domain Oxidored_q2 PF00420.24 gi|21227565|ref|NP_633487.1| - 6.6 6.4 12.5 5.9 6.6 0.1 3.7 3 1 1 4 4 4 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PLDc_N PF13396.6 gi|21227566|ref|NP_633488.1| - 8e-12 44.9 2.7 8e-12 44.9 2.7 1.8 2 0 0 2 2 2 1 Phospholipase_D-nuclease N-terminal HlyIII PF03006.20 gi|21227566|ref|NP_633488.1| - 0.00074 19.3 0.9 0.00091 19.0 0.9 1.1 1 0 0 1 1 1 1 Haemolysin-III related Phage_holin_3_6 PF07332.11 gi|21227566|ref|NP_633488.1| - 0.0032 17.5 0.6 0.0035 17.4 0.6 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III CPP1-like PF11833.8 gi|21227566|ref|NP_633488.1| - 0.087 12.5 0.2 0.093 12.4 0.2 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF4131 PF13567.6 gi|21227566|ref|NP_633488.1| - 0.099 12.3 0.8 0.12 12.0 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) TMEM252 PF15664.5 gi|21227566|ref|NP_633488.1| - 0.16 11.7 0.9 0.19 11.4 0.9 1.2 1 0 0 1 1 1 0 Transmembrane protein 252 family DUF2207 PF09972.9 gi|21227566|ref|NP_633488.1| - 0.21 10.3 3.0 0.27 9.9 3.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Tmemb_9 PF05434.11 gi|21227566|ref|NP_633488.1| - 0.29 11.0 3.5 0.15 11.9 2.0 1.3 1 1 0 1 1 1 0 TMEM9 TMEM43 PF07787.12 gi|21227566|ref|NP_633488.1| - 3.2 7.1 4.8 3.3 7.0 4.8 1.0 1 0 0 1 1 1 0 Transmembrane protein 43 MFS_1 PF07690.16 gi|21227567|ref|NP_633489.1| - 3e-53 181.0 59.1 9.2e-45 153.1 27.5 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|21227567|ref|NP_633489.1| - 5.6e-14 51.8 14.7 7.6e-14 51.4 14.7 1.1 1 0 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 gi|21227567|ref|NP_633489.1| - 2.5e-10 39.8 0.9 2.5e-10 39.8 0.9 1.9 2 0 0 2 2 2 1 Sugar (and other) transporter MFS_2 PF13347.6 gi|21227567|ref|NP_633489.1| - 0.053 12.1 21.7 0.042 12.4 4.6 2.9 2 1 0 2 2 2 0 MFS/sugar transport protein Sigma70_r4_2 PF08281.12 gi|21227568|ref|NP_633490.1| - 1.4e-05 24.7 0.1 4.6e-05 23.0 0.0 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|21227568|ref|NP_633490.1| - 0.00026 20.7 0.0 0.00056 19.6 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_40 PF14493.6 gi|21227568|ref|NP_633490.1| - 0.00031 21.1 0.1 0.00044 20.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2197 PF09963.9 gi|21227568|ref|NP_633490.1| - 0.012 15.9 0.2 0.025 14.8 0.2 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) NMD3 PF04981.13 gi|21227568|ref|NP_633490.1| - 0.013 15.0 0.3 0.02 14.4 0.3 1.4 1 1 0 1 1 1 0 NMD3 family GerE PF00196.19 gi|21227568|ref|NP_633490.1| - 0.042 13.4 0.0 0.077 12.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family ADK_lid PF05191.14 gi|21227568|ref|NP_633490.1| - 0.054 13.5 0.0 0.35 10.9 0.0 2.1 2 0 0 2 2 2 0 Adenylate kinase, active site lid HTH_Tnp_IS630 PF01710.16 gi|21227568|ref|NP_633490.1| - 0.057 13.5 0.4 0.088 12.9 0.1 1.5 2 0 0 2 2 2 0 Transposase HTH_29 PF13551.6 gi|21227568|ref|NP_633490.1| - 0.091 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_38 PF13936.6 gi|21227568|ref|NP_633490.1| - 0.091 12.5 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|21227568|ref|NP_633490.1| - 0.11 12.6 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DDE_Tnp_IS1 PF03400.13 gi|21227569|ref|NP_633491.1| - 7.6e-05 23.1 0.2 0.00011 22.6 0.2 1.3 1 0 0 1 1 1 1 IS1 transposase Zn_Tnp_IS1595 PF12760.7 gi|21227570|ref|NP_633492.1| - 0.00022 21.1 0.2 0.00032 20.6 0.2 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21227570|ref|NP_633492.1| - 0.0017 18.4 0.6 0.0041 17.2 0.6 1.6 1 1 0 1 1 1 1 Zinc ribbon domain zf-H2C2_2 PF13465.6 gi|21227570|ref|NP_633492.1| - 0.0067 16.8 0.8 0.3 11.6 0.1 2.3 2 0 0 2 2 2 1 Zinc-finger double domain zf_UBZ PF18439.1 gi|21227570|ref|NP_633492.1| - 0.012 15.2 0.9 0.71 9.5 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zinc_ribbon_15 PF17032.5 gi|21227570|ref|NP_633492.1| - 0.018 15.8 0.1 0.033 14.9 0.0 1.4 2 0 0 2 2 1 0 zinc-ribbon family zinc_ribbon_4 PF13717.6 gi|21227570|ref|NP_633492.1| - 0.018 15.0 2.0 0.06 13.3 2.0 1.8 1 1 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|21227570|ref|NP_633492.1| - 0.032 13.8 0.2 1.1 8.8 0.0 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding DUF3797 PF12677.7 gi|21227570|ref|NP_633492.1| - 0.054 13.4 0.3 3.3 7.7 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) FA_desaturase PF00487.24 gi|21227570|ref|NP_633492.1| - 0.071 12.9 1.3 0.076 12.8 1.3 1.1 1 0 0 1 1 1 0 Fatty acid desaturase A2L_zn_ribbon PF08792.10 gi|21227570|ref|NP_633492.1| - 0.085 12.6 0.5 0.5 10.2 0.0 2.0 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-LITAF-like PF10601.9 gi|21227570|ref|NP_633492.1| - 0.096 13.0 8.2 12 6.2 6.3 2.9 2 1 0 2 2 2 0 LITAF-like zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|21227570|ref|NP_633492.1| - 0.12 12.1 2.9 1.6 8.5 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.19 gi|21227570|ref|NP_633492.1| - 0.13 12.3 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-Di19 PF05605.12 gi|21227570|ref|NP_633492.1| - 0.13 12.6 0.1 0.22 11.8 0.1 1.4 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-FPG_IleRS PF06827.14 gi|21227570|ref|NP_633492.1| - 0.14 12.0 4.8 4.3 7.3 2.8 2.3 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS DUF4337 PF14235.6 gi|21227570|ref|NP_633492.1| - 0.19 11.8 1.2 0.22 11.6 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) zf-HIT PF04438.16 gi|21227570|ref|NP_633492.1| - 0.24 11.3 4.7 3.9 7.4 0.1 2.2 2 0 0 2 2 2 0 HIT zinc finger DUF1610 PF07754.11 gi|21227570|ref|NP_633492.1| - 0.24 11.4 0.6 0.24 11.4 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Zn_ribbon_SprT PF17283.2 gi|21227570|ref|NP_633492.1| - 0.26 11.2 6.0 4 7.4 6.0 2.1 1 1 0 1 1 1 0 SprT-like zinc ribbon domain zinc_ribbon_5 PF13719.6 gi|21227570|ref|NP_633492.1| - 0.38 10.6 2.5 2.6 7.9 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf_C2H2_10 PF18414.1 gi|21227570|ref|NP_633492.1| - 0.39 10.3 3.8 0.93 9.1 0.3 2.4 2 0 0 2 2 2 0 C2H2 type zinc-finger 2TM PF13239.6 gi|21227570|ref|NP_633492.1| - 0.51 10.7 3.9 0.72 10.2 3.9 1.3 1 0 0 1 1 1 0 2TM domain zf-C2HC_2 PF13913.6 gi|21227570|ref|NP_633492.1| - 0.51 10.3 0.1 0.51 10.3 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type DUF4191 PF13829.6 gi|21227570|ref|NP_633492.1| - 0.57 9.5 3.0 0.71 9.2 3.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) zf-CCHC_5 PF14787.6 gi|21227570|ref|NP_633492.1| - 1.7 8.4 7.7 9.1 6.1 2.2 2.3 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger Cys_rich_KTR PF14205.6 gi|21227570|ref|NP_633492.1| - 1.8 8.5 6.8 8.5 6.3 1.1 2.5 1 1 1 2 2 2 0 Cysteine-rich KTR LCM PF04072.14 gi|21227571|ref|NP_633493.1| - 2.2e-40 138.6 0.0 3.2e-40 138.1 0.0 1.1 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase tRNA-synt_2d PF01409.20 gi|21227572|ref|NP_633494.1| - 1e-89 300.3 0.0 1.4e-89 299.8 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|21227572|ref|NP_633494.1| - 1.5e-08 34.3 0.0 2e-06 27.4 0.0 2.4 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 gi|21227572|ref|NP_633494.1| - 0.00058 19.0 1.0 0.028 13.5 0.0 2.9 4 0 0 4 4 4 2 tRNA synthetases class II (D, K and N) tRNA-synt_1b PF00579.25 gi|21227573|ref|NP_633495.1| - 4e-33 115.0 0.0 4.6e-18 65.6 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) Polbeta PF18765.1 gi|21227574|ref|NP_633496.1| - 9.9e-19 67.2 0.8 1.4e-18 66.8 0.8 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|21227574|ref|NP_633496.1| - 0.051 13.9 1.0 0.07 13.4 1.0 1.5 1 1 0 1 1 1 0 Nucleotidyltransferase domain DUF86 PF01934.17 gi|21227575|ref|NP_633497.1| - 1.8e-29 102.0 0.1 2.3e-29 101.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Radical_SAM PF04055.21 gi|21227576|ref|NP_633498.1| - 2e-10 41.3 0.0 3.6e-10 40.5 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|21227576|ref|NP_633498.1| - 8.7e-06 26.2 0.0 1.7e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain NAD_binding_2 PF03446.15 gi|21227576|ref|NP_633498.1| - 0.0008 19.6 0.0 0.0015 18.7 0.0 1.4 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase eIF-5_eIF-2B PF01873.17 gi|21227577|ref|NP_633499.1| - 4.2e-38 129.8 0.0 6.1e-38 129.3 0.0 1.2 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.20 gi|21227577|ref|NP_633499.1| - 7.4e-12 45.1 0.6 2e-11 43.7 0.6 1.7 1 0 0 1 1 1 1 TRAM domain DUF4265 PF14085.6 gi|21227577|ref|NP_633499.1| - 0.038 13.9 0.1 0.17 11.9 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4265) NMD3 PF04981.13 gi|21227577|ref|NP_633499.1| - 0.057 12.9 0.0 0.074 12.5 0.0 1.2 1 0 0 1 1 1 0 NMD3 family Zn-ribbon_8 PF09723.10 gi|21227577|ref|NP_633499.1| - 0.069 13.3 0.4 0.15 12.2 0.4 1.6 1 0 0 1 1 1 0 Zinc ribbon domain ZF-HD_dimer PF04770.12 gi|21227577|ref|NP_633499.1| - 0.096 13.0 0.3 0.21 11.9 0.0 1.7 2 0 0 2 2 2 0 ZF-HD protein dimerisation region zf-ribbon_3 PF13248.6 gi|21227577|ref|NP_633499.1| - 0.25 10.8 1.4 8.8 5.9 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-RanBP PF00641.18 gi|21227577|ref|NP_633499.1| - 0.43 9.9 0.1 0.43 9.9 0.1 1.7 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others DUF35_N PF12172.8 gi|21227577|ref|NP_633499.1| - 2.7 8.0 4.4 2.2 8.3 0.4 2.3 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Ribosomal_L16 PF00252.18 gi|21227578|ref|NP_633500.1| - 1.4e-31 109.2 0.7 1.7e-31 108.9 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DUF1786 PF08735.10 gi|21227579|ref|NP_633501.1| - 7.6e-91 303.9 0.0 9.3e-91 303.6 0.0 1.1 1 0 0 1 1 1 1 Putative pyruvate format-lyase activating enzyme (DUF1786) DDR PF08841.10 gi|21227579|ref|NP_633501.1| - 0.0021 17.1 0.1 0.0047 16.0 0.1 1.5 1 0 0 1 1 1 1 Diol dehydratase reactivase ATPase-like domain MoCF_biosynth PF00994.24 gi|21227580|ref|NP_633502.1| - 7.5e-34 116.5 0.0 8.7e-34 116.3 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain SNF2_N PF00176.23 gi|21227581|ref|NP_633503.1| - 1.5e-62 211.4 0.0 2e-62 211.0 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF3670 PF12419.8 gi|21227581|ref|NP_633503.1| - 2.2e-41 140.9 0.6 5.2e-41 139.7 0.6 1.7 1 0 0 1 1 1 1 SNF2 Helicase protein Helicase_C PF00271.31 gi|21227581|ref|NP_633503.1| - 7.2e-18 65.0 0.0 2.1e-17 63.5 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|21227581|ref|NP_633503.1| - 5.6e-05 23.2 0.0 9.9e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 gi|21227581|ref|NP_633503.1| - 0.2 10.9 0.0 0.38 9.9 0.0 1.4 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase SWIM PF04434.17 gi|21227582|ref|NP_633504.1| - 4.9e-07 29.3 0.1 9.2e-07 28.4 0.1 1.4 1 0 0 1 1 1 1 SWIM zinc finger FeoA PF04023.14 gi|21227583|ref|NP_633505.1| - 8e-07 29.2 0.0 8.1e-07 29.2 0.0 1.0 1 0 0 1 1 1 1 FeoA domain UPF0182 PF03699.13 gi|21227584|ref|NP_633506.1| - 1.2 7.2 3.4 1.5 6.9 3.4 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) Gate PF07670.14 gi|21227585|ref|NP_633507.1| - 0.028 14.7 0.2 0.028 14.7 0.2 1.1 1 0 0 1 1 1 0 Nucleoside recognition DUF1724 PF08350.10 gi|21227586|ref|NP_633508.1| - 4.8e-20 71.5 0.0 8.6e-20 70.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21227586|ref|NP_633508.1| - 3.1e-05 23.7 0.1 5.1e-05 23.0 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|21227586|ref|NP_633508.1| - 5.4e-05 23.0 0.1 0.00011 22.0 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|21227586|ref|NP_633508.1| - 0.017 15.2 0.0 0.035 14.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HemN_C PF06969.16 gi|21227586|ref|NP_633508.1| - 0.025 14.6 0.3 3.3 7.9 0.0 2.4 2 0 0 2 2 2 0 HemN C-terminal domain HTH_11 PF08279.12 gi|21227586|ref|NP_633508.1| - 0.092 12.7 0.1 0.22 11.5 0.1 1.6 1 0 0 1 1 1 0 HTH domain Rrf2 PF02082.20 gi|21227586|ref|NP_633508.1| - 0.17 12.3 0.0 0.57 10.6 0.0 1.9 1 0 0 1 1 1 0 Transcriptional regulator CRS1_YhbY PF01985.21 gi|21227587|ref|NP_633509.1| - 2.7e-21 75.5 1.6 2.9e-21 75.4 1.6 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain CelTOS PF18659.1 gi|21227587|ref|NP_633509.1| - 0.014 15.8 0.9 0.016 15.6 0.9 1.1 1 0 0 1 1 1 0 Cell-traversal protein for ookinetes and sporozoites tRNA-synt_2c PF01411.19 gi|21227588|ref|NP_633510.1| - 1.6e-132 442.9 0.0 2e-132 442.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|21227588|ref|NP_633510.1| - 5.5e-24 85.2 1.3 5.5e-24 85.2 1.3 1.8 2 0 0 2 2 2 1 DHHA1 domain tRNA_SAD PF07973.14 gi|21227588|ref|NP_633510.1| - 3.6e-14 52.6 2.2 1e-13 51.1 2.2 1.9 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Methyltransf_15 PF09445.10 gi|21227589|ref|NP_633511.1| - 2.1e-12 46.9 0.0 3.7e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|21227589|ref|NP_633511.1| - 2.5e-08 34.5 0.0 4.8e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227589|ref|NP_633511.1| - 4.3e-08 33.1 0.0 7.2e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|21227589|ref|NP_633511.1| - 3.1e-07 30.0 0.0 6.1e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_11 PF08241.12 gi|21227589|ref|NP_633511.1| - 1.6e-06 28.6 0.0 3.5e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|21227589|ref|NP_633511.1| - 0.00032 20.7 0.0 0.00072 19.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|21227589|ref|NP_633511.1| - 0.0005 19.2 0.0 0.00079 18.5 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Met_10 PF02475.16 gi|21227589|ref|NP_633511.1| - 0.00075 19.3 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein MTS PF05175.14 gi|21227589|ref|NP_633511.1| - 0.0017 17.9 0.0 0.0027 17.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Peptidase_A25 PF03418.14 gi|21227589|ref|NP_633511.1| - 0.021 13.7 0.0 0.037 12.9 0.0 1.3 1 0 0 1 1 1 0 Germination protease Methyltr_RsmB-F PF01189.17 gi|21227589|ref|NP_633511.1| - 0.029 14.0 0.0 0.048 13.3 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 gi|21227589|ref|NP_633511.1| - 0.037 14.1 0.0 0.079 13.1 0.0 1.5 2 0 0 2 2 1 0 FtsJ-like methyltransferase Cons_hypoth95 PF03602.15 gi|21227589|ref|NP_633511.1| - 0.064 12.9 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 PCMT PF01135.19 gi|21227589|ref|NP_633511.1| - 0.068 12.9 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CmcI PF04989.12 gi|21227589|ref|NP_633511.1| - 0.096 12.4 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Cephalosporin hydroxylase UPF0020 PF01170.18 gi|21227589|ref|NP_633511.1| - 0.13 12.0 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Thump_like PF18096.1 gi|21227589|ref|NP_633511.1| - 0.14 12.1 0.0 0.31 11.0 0.0 1.6 1 0 0 1 1 1 0 THUMP domain-like Methyltransf_30 PF05430.11 gi|21227589|ref|NP_633511.1| - 0.14 12.0 0.0 0.92 9.4 0.0 2.0 2 0 0 2 2 2 0 S-adenosyl-L-methionine-dependent methyltransferase RrnaAD PF00398.20 gi|21227589|ref|NP_633511.1| - 0.15 11.1 0.0 0.23 10.5 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Acetyltransf_1 PF00583.25 gi|21227590|ref|NP_633512.1| - 7.3e-19 68.1 0.2 5e-18 65.4 0.1 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|21227590|ref|NP_633512.1| - 3.7e-11 43.1 0.0 9.6e-11 41.7 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|21227590|ref|NP_633512.1| - 6.4e-11 42.5 0.1 1.7e-10 41.2 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21227590|ref|NP_633512.1| - 3.7e-07 30.0 0.0 1.6e-06 28.0 0.0 1.9 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|21227590|ref|NP_633512.1| - 4.4e-07 30.0 0.2 2.6e-06 27.5 0.1 2.4 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|21227590|ref|NP_633512.1| - 5.8e-06 27.0 0.0 1.7e-05 25.5 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21227590|ref|NP_633512.1| - 0.00086 19.4 0.1 0.0019 18.3 0.1 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 gi|21227590|ref|NP_633512.1| - 0.0033 17.6 0.3 0.0069 16.5 0.3 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|21227590|ref|NP_633512.1| - 0.02 14.4 0.1 0.11 12.0 0.1 2.1 1 1 0 1 1 1 0 Putative acetyl-transferase Iso_dh PF00180.20 gi|21227591|ref|NP_633513.1| - 3.2e-93 312.6 0.0 3.6e-93 312.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Aconitase_C PF00694.19 gi|21227592|ref|NP_633514.1| - 8e-18 65.0 0.0 1.1e-17 64.5 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|21227592|ref|NP_633514.1| - 0.0055 16.4 0.2 0.043 13.5 0.2 2.0 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus DUF87 PF01935.17 gi|21227593|ref|NP_633515.1| - 3.2e-09 37.2 0.0 5.9e-09 36.4 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 gi|21227593|ref|NP_633515.1| - 0.00012 21.5 0.1 0.45 9.8 0.0 2.4 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA_10 PF12846.7 gi|21227593|ref|NP_633515.1| - 0.0079 15.2 0.0 2.3 7.0 0.0 2.4 2 1 0 2 2 2 2 AAA-like domain DUF853 PF05872.12 gi|21227593|ref|NP_633515.1| - 0.0089 14.7 0.0 0.023 13.3 0.0 1.6 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) Zot PF05707.12 gi|21227593|ref|NP_633515.1| - 0.015 14.9 0.0 0.036 13.7 0.0 1.6 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) AAA_22 PF13401.6 gi|21227593|ref|NP_633515.1| - 0.023 15.0 0.1 6.3 7.1 0.0 2.5 3 0 0 3 3 3 0 AAA domain AAA PF00004.29 gi|21227593|ref|NP_633515.1| - 0.034 14.6 0.0 0.81 10.1 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) TFIIE_beta PF02186.15 gi|21227593|ref|NP_633515.1| - 0.19 12.0 0.0 0.41 11.0 0.0 1.5 1 0 0 1 1 1 0 TFIIE beta subunit core domain DUF1724 PF08350.10 gi|21227594|ref|NP_633516.1| - 7.1e-22 77.3 0.2 1.6e-21 76.2 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21227594|ref|NP_633516.1| - 1.7e-06 27.8 0.1 3.3e-06 26.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF1495 PF07381.11 gi|21227594|ref|NP_633516.1| - 0.0017 18.2 0.2 0.1 12.5 0.2 2.5 1 1 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_20 PF12840.7 gi|21227594|ref|NP_633516.1| - 0.013 15.6 0.0 0.023 14.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 gi|21227594|ref|NP_633516.1| - 0.014 15.3 0.0 0.033 14.1 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|21227594|ref|NP_633516.1| - 0.033 14.1 0.1 0.098 12.6 0.0 1.8 2 0 0 2 2 2 0 MarR family HTH_24 PF13412.6 gi|21227594|ref|NP_633516.1| - 0.062 12.9 0.2 0.13 11.9 0.2 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HemN_C PF06969.16 gi|21227594|ref|NP_633516.1| - 0.12 12.5 0.0 0.33 11.1 0.0 1.8 1 0 0 1 1 1 0 HemN C-terminal domain DUF1297 PF06973.12 gi|21227595|ref|NP_633517.1| - 1.9e-56 190.6 0.1 2.6e-56 190.1 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|21227595|ref|NP_633517.1| - 9.2e-45 151.6 0.0 1.9e-44 150.5 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) CPSase_L_D2 PF02786.17 gi|21227595|ref|NP_633517.1| - 0.0032 17.0 0.0 0.0058 16.2 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|21227595|ref|NP_633517.1| - 0.0034 17.5 0.0 0.014 15.4 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain DUF4895 PF16236.5 gi|21227595|ref|NP_633517.1| - 0.03 14.1 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4895) HTH_20 PF12840.7 gi|21227596|ref|NP_633518.1| - 1.2e-09 38.1 0.0 2.1e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|21227596|ref|NP_633518.1| - 2.7e-06 26.8 0.2 5.7e-06 25.8 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF742 PF05331.11 gi|21227596|ref|NP_633518.1| - 3e-05 23.8 0.0 5.6e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF742) HTH_5 PF01022.20 gi|21227596|ref|NP_633518.1| - 0.00014 21.7 0.2 0.00028 20.7 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|21227596|ref|NP_633518.1| - 0.00033 20.5 0.2 0.00095 19.0 0.2 1.8 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Dimerisation2 PF16864.5 gi|21227596|ref|NP_633518.1| - 0.025 14.6 0.0 0.049 13.6 0.0 1.4 1 0 0 1 1 1 0 Dimerisation domain TFIIE_alpha PF02002.17 gi|21227596|ref|NP_633518.1| - 0.035 14.0 0.7 0.061 13.2 0.7 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_45 PF14947.6 gi|21227596|ref|NP_633518.1| - 0.049 13.6 0.9 0.1 12.6 0.9 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix MarR_2 PF12802.7 gi|21227596|ref|NP_633518.1| - 0.053 13.4 0.0 0.098 12.6 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_IclR PF09339.10 gi|21227596|ref|NP_633518.1| - 0.09 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain PseudoU_synth_1 PF01416.20 gi|21227597|ref|NP_633519.1| - 9.4e-28 96.8 0.0 1e-21 77.4 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase UPF0020 PF01170.18 gi|21227598|ref|NP_633520.1| - 3.5e-28 98.7 0.0 1.8e-27 96.3 0.0 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|21227598|ref|NP_633520.1| - 2e-15 57.1 1.0 6.1e-15 55.6 1.4 1.6 2 0 0 2 2 2 1 THUMP domain Methyltransf_11 PF08241.12 gi|21227598|ref|NP_633520.1| - 1.8e-08 34.9 0.0 7.6e-08 32.9 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|21227598|ref|NP_633520.1| - 2e-08 34.3 0.0 0.0018 18.0 0.0 2.2 2 0 0 2 2 2 2 DNA methylase Methyltransf_25 PF13649.6 gi|21227598|ref|NP_633520.1| - 4.2e-08 33.8 0.0 1.3e-07 32.3 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227598|ref|NP_633520.1| - 3.4e-07 30.2 0.0 5.8e-07 29.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain AviRa PF11599.8 gi|21227598|ref|NP_633520.1| - 0.00028 20.4 0.0 0.016 14.7 0.0 2.2 1 1 1 2 2 2 1 RRNA methyltransferase AviRa Cons_hypoth95 PF03602.15 gi|21227598|ref|NP_633520.1| - 0.00028 20.6 0.0 0.00045 19.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 gi|21227598|ref|NP_633520.1| - 0.00073 19.1 0.0 0.0015 18.1 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Ubie_methyltran PF01209.18 gi|21227598|ref|NP_633520.1| - 0.0033 16.8 0.0 0.0081 15.5 0.0 1.6 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|21227598|ref|NP_633520.1| - 0.0083 15.7 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain N6_Mtase PF02384.16 gi|21227598|ref|NP_633520.1| - 0.016 14.5 0.0 0.038 13.3 0.0 1.5 1 1 0 1 1 1 0 N-6 DNA Methylase Mtf2_C PF14061.6 gi|21227598|ref|NP_633520.1| - 0.021 15.0 0.0 0.042 14.0 0.0 1.4 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 Methyltransf_8 PF05148.15 gi|21227598|ref|NP_633520.1| - 0.16 11.8 0.0 0.39 10.5 0.0 1.7 2 0 0 2 2 2 0 Hypothetical methyltransferase DUF1805 PF08827.11 gi|21227599|ref|NP_633521.1| - 1.1e-24 86.5 2.5 1.5e-24 86.1 2.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1805) IMS PF00817.20 gi|21227599|ref|NP_633521.1| - 0.059 13.4 0.0 0.07 13.1 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family CsgA PF17334.2 gi|21227600|ref|NP_633522.1| - 0.51 11.1 4.1 4.2 8.2 0.1 2.3 2 0 0 2 2 2 0 Minor curli fiber component A Peptidase_M24 PF00557.24 gi|21227601|ref|NP_633523.1| - 9.6e-43 146.3 0.0 1.1e-42 146.1 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 Peptidase_M24 PF00557.24 gi|21227602|ref|NP_633524.1| - 3.7e-45 154.2 0.7 5.3e-45 153.7 0.7 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF2452 PF10504.9 gi|21227602|ref|NP_633524.1| - 0.057 12.9 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2452) AdoMet_Synthase PF01941.19 gi|21227604|ref|NP_633526.1| - 7.9e-180 597.8 0.7 8.9e-180 597.7 0.7 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) HisG PF01634.18 gi|21227605|ref|NP_633527.1| - 2.1e-50 170.8 0.2 3.1e-50 170.3 0.2 1.3 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|21227605|ref|NP_633527.1| - 1.5e-26 92.3 0.3 3.5e-26 91.2 0.3 1.6 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.11 gi|21227605|ref|NP_633527.1| - 1.2e-06 28.6 0.0 3.9e-05 23.7 0.0 2.4 1 1 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.20 gi|21227605|ref|NP_633527.1| - 0.0031 17.0 0.0 0.007 15.8 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 gi|21227605|ref|NP_633527.1| - 0.057 13.0 0.0 0.1 12.2 0.0 1.5 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein DUF111 PF01969.17 gi|21227605|ref|NP_633527.1| - 0.1 11.7 1.3 6.7 5.7 0.1 2.2 1 1 0 2 2 2 0 Protein of unknown function DUF111 DUF881 PF05949.12 gi|21227605|ref|NP_633527.1| - 0.14 12.0 0.2 8.3 6.3 0.0 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF881) LysR_substrate PF03466.20 gi|21227605|ref|NP_633527.1| - 0.18 11.1 0.0 0.28 10.5 0.0 1.3 1 0 0 1 1 1 0 LysR substrate binding domain His_biosynth PF00977.21 gi|21227606|ref|NP_633528.1| - 4.4e-77 258.6 0.5 5e-77 258.4 0.5 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|21227606|ref|NP_633528.1| - 2e-10 40.3 0.1 6.5e-05 22.2 0.0 2.1 1 1 0 2 2 2 2 Dihydrouridine synthase (Dus) DHO_dh PF01180.21 gi|21227606|ref|NP_633528.1| - 6.1e-08 32.2 0.4 0.00039 19.7 0.1 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase NMO PF03060.15 gi|21227606|ref|NP_633528.1| - 7.2e-08 32.2 2.4 3.9e-07 29.8 0.4 2.0 1 1 0 2 2 2 1 Nitronate monooxygenase NanE PF04131.14 gi|21227606|ref|NP_633528.1| - 2.9e-07 29.9 0.2 0.021 14.0 0.1 2.2 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase IMPDH PF00478.25 gi|21227606|ref|NP_633528.1| - 6.6e-06 25.4 0.2 0.019 14.0 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain TMP-TENI PF02581.17 gi|21227606|ref|NP_633528.1| - 8.5e-06 25.2 1.4 5e-05 22.7 0.1 2.3 2 1 0 2 2 2 1 Thiamine monophosphate synthase ThiG PF05690.14 gi|21227606|ref|NP_633528.1| - 1.4e-05 24.5 0.6 0.043 13.1 0.2 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG IGPS PF00218.21 gi|21227606|ref|NP_633528.1| - 2.3e-05 23.7 0.2 0.0013 18.0 0.0 2.1 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase PcrB PF01884.17 gi|21227606|ref|NP_633528.1| - 5.3e-05 22.8 0.3 0.0062 16.0 0.0 2.1 2 0 0 2 2 2 1 PcrB family G3P_antiterm PF04309.12 gi|21227606|ref|NP_633528.1| - 0.00021 20.7 1.7 0.0031 17.0 0.1 2.2 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator Trp_syntA PF00290.20 gi|21227606|ref|NP_633528.1| - 0.00037 19.4 1.4 0.0067 15.3 0.1 2.1 2 0 0 2 2 2 1 Tryptophan synthase alpha chain FMN_dh PF01070.18 gi|21227606|ref|NP_633528.1| - 0.0011 18.1 0.2 0.31 10.0 0.1 2.2 2 0 0 2 2 2 2 FMN-dependent dehydrogenase DUF561 PF04481.12 gi|21227606|ref|NP_633528.1| - 0.026 13.7 0.2 0.047 12.9 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF561) DNA_pol_lambd_f PF10391.9 gi|21227606|ref|NP_633528.1| - 0.058 13.2 0.0 26 4.8 0.0 3.2 3 0 0 3 3 3 0 Fingers domain of DNA polymerase lambda Ribul_P_3_epim PF00834.19 gi|21227606|ref|NP_633528.1| - 0.066 12.6 0.5 3.7 6.9 0.0 2.2 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family IGPD PF00475.18 gi|21227607|ref|NP_633529.1| - 1.2e-62 210.4 2.3 1.6e-62 210.1 2.3 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase FdhD-NarQ PF02634.15 gi|21227608|ref|NP_633530.1| - 2.3e-51 174.8 0.0 5.5e-51 173.5 0.0 1.5 1 1 0 1 1 1 1 FdhD/NarQ family GATase1_like PF07090.11 gi|21227610|ref|NP_633532.1| - 0.11 11.9 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Putative glutamine amidotransferase Pilin_N PF07790.11 gi|21227610|ref|NP_633532.1| - 1 10.3 8.2 5.3 8.0 7.2 2.8 2 1 0 2 2 2 0 Archaeal Type IV pilin, N-terminal Pilin_N PF07790.11 gi|21227611|ref|NP_633533.1| - 1.7e-16 60.9 0.2 4.3e-16 59.6 0.2 1.7 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal PKD_channel PF08016.12 gi|21227611|ref|NP_633533.1| - 0.06 12.0 0.2 0.17 10.5 0.2 1.6 2 0 0 2 2 2 0 Polycystin cation channel Pilin_N PF07790.11 gi|21227612|ref|NP_633534.1| - 5.6e-17 62.4 2.3 6.9e-17 62.1 1.5 1.6 1 1 1 2 2 2 1 Archaeal Type IV pilin, N-terminal LTD PF00932.19 gi|21227612|ref|NP_633534.1| - 0.11 12.9 0.1 0.17 12.2 0.1 1.3 1 0 0 1 1 1 0 Lamin Tail Domain Pilin_N PF07790.11 gi|21227613|ref|NP_633535.1| - 1e-23 84.0 1.0 1e-23 84.0 1.0 1.6 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal PrgU PF09627.10 gi|21227614|ref|NP_633536.1| - 0.0016 18.4 0.9 0.0036 17.2 0.9 1.6 1 0 0 1 1 1 1 PrgU-like protein Pilin_N PF07790.11 gi|21227615|ref|NP_633537.1| - 2.8e-19 69.8 0.5 4e-19 69.3 0.5 1.2 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal Pilin_N PF07790.11 gi|21227616|ref|NP_633538.1| - 6e-17 62.3 1.7 2e-16 60.7 1.1 2.2 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Arch_flagellin PF01917.16 gi|21227616|ref|NP_633538.1| - 0.012 15.8 0.5 0.028 14.6 0.5 1.6 1 0 0 1 1 1 0 Archaebacterial flagellin T2SSF PF00482.23 gi|21227617|ref|NP_633539.1| - 1.1e-38 132.0 3.1 1.1e-21 77.1 0.0 4.2 6 0 0 6 6 6 2 Type II secretion system (T2SS), protein F DUF2207 PF09972.9 gi|21227617|ref|NP_633539.1| - 0.081 11.7 15.6 2 7.1 1.8 3.9 3 1 0 3 3 3 0 Predicted membrane protein (DUF2207) 7tm_1 PF00001.21 gi|21227617|ref|NP_633539.1| - 1.5 8.1 8.0 45 3.2 8.0 3.1 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) T2SSE PF00437.20 gi|21227618|ref|NP_633540.1| - 2.3e-44 151.5 0.0 3.5e-44 150.9 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|21227618|ref|NP_633540.1| - 0.025 14.3 0.1 0.062 13.0 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 gi|21227618|ref|NP_633540.1| - 0.069 12.7 0.0 0.17 11.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region Aminotran_5 PF00266.19 gi|21227619|ref|NP_633541.1| - 3.4e-131 437.6 0.0 3.9e-131 437.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|21227619|ref|NP_633541.1| - 3.1e-10 39.9 0.0 4.4e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|21227619|ref|NP_633541.1| - 1.7e-07 30.7 0.1 6.6e-06 25.5 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|21227619|ref|NP_633541.1| - 2e-07 29.9 0.0 3.5e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|21227619|ref|NP_633541.1| - 2.6e-06 27.0 0.0 4.5e-06 26.2 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase SHMT PF00464.19 gi|21227619|ref|NP_633541.1| - 0.0045 15.6 0.0 0.0069 15.0 0.0 1.2 1 0 0 1 1 1 1 Serine hydroxymethyltransferase OKR_DC_1 PF01276.20 gi|21227619|ref|NP_633541.1| - 0.035 12.8 0.1 0.17 10.6 0.1 2.0 2 1 0 2 2 2 0 Orn/Lys/Arg decarboxylase, major domain S_100 PF01023.19 gi|21227619|ref|NP_633541.1| - 0.1 12.3 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain DUF531 PF04407.12 gi|21227620|ref|NP_633542.1| - 7.4e-81 270.3 0.0 9e-81 270.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF531) Acetyltransf_1 PF00583.25 gi|21227621|ref|NP_633543.1| - 3.5e-13 49.8 0.0 4.4e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21227621|ref|NP_633543.1| - 1.3e-12 48.0 0.0 1.8e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21227621|ref|NP_633543.1| - 1.5e-10 41.1 0.0 2.4e-10 40.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21227621|ref|NP_633543.1| - 2.3e-05 24.5 0.0 3.6e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 gi|21227621|ref|NP_633543.1| - 2.4e-05 23.9 0.0 2.5e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Putative acetyl-transferase FR47 PF08445.10 gi|21227621|ref|NP_633543.1| - 8.9e-05 22.4 0.0 0.00015 21.6 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|21227621|ref|NP_633543.1| - 0.00031 20.8 0.0 0.0021 18.1 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 gi|21227621|ref|NP_633543.1| - 0.011 15.7 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_4 PF13420.7 gi|21227621|ref|NP_633543.1| - 0.076 13.1 0.0 0.85 9.7 0.0 2.0 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain QueC PF06508.13 gi|21227622|ref|NP_633544.1| - 2.8e-06 27.0 0.0 8.4e-05 22.2 0.0 2.7 1 1 1 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|21227622|ref|NP_633544.1| - 8e-06 25.1 0.0 1.3e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.21 gi|21227622|ref|NP_633544.1| - 0.00018 21.3 0.0 0.00024 20.9 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.20 gi|21227622|ref|NP_633544.1| - 0.00047 20.0 0.0 0.0045 16.8 0.0 2.2 1 1 0 1 1 1 1 PP-loop family ThiI PF02568.14 gi|21227622|ref|NP_633544.1| - 0.00092 18.8 0.0 0.0027 17.3 0.0 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|21227622|ref|NP_633544.1| - 0.022 13.5 0.0 1.6 7.4 0.0 2.4 2 0 0 2 2 2 0 tRNA methyl transferase PAPS_reduct PF01507.19 gi|21227622|ref|NP_633544.1| - 0.031 14.3 0.0 0.52 10.3 0.0 2.2 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family Spore_III_AB PF09548.10 gi|21227622|ref|NP_633544.1| - 0.28 11.3 2.3 3.8 7.6 1.3 2.8 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) PGM_PMM_I PF02878.16 gi|21227623|ref|NP_633545.1| - 1.3e-41 141.5 0.1 3.4e-41 140.2 0.1 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|21227623|ref|NP_633545.1| - 1.5e-27 96.3 0.0 2.5e-27 95.5 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|21227623|ref|NP_633545.1| - 7e-27 93.9 0.1 1.4e-26 92.9 0.1 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|21227623|ref|NP_633545.1| - 1e-11 44.9 0.1 4e-11 42.9 0.0 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Methyltransf_29 PF03141.16 gi|21227623|ref|NP_633545.1| - 0.26 9.8 0.0 0.38 9.2 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Radical_SAM PF04055.21 gi|21227624|ref|NP_633546.1| - 1.2e-25 90.8 0.1 6e-24 85.3 0.0 2.3 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|21227624|ref|NP_633546.1| - 1.1e-10 41.6 0.0 4.6e-10 39.6 0.0 2.0 2 0 0 2 2 2 1 B12 binding domain Peptidase_M50 PF02163.22 gi|21227625|ref|NP_633547.1| - 2.1e-12 46.9 10.1 4e-08 32.8 0.5 2.4 1 1 1 2 2 2 2 Peptidase family M50 DUF126 PF01989.16 gi|21227626|ref|NP_633548.1| - 9.8e-36 121.4 0.4 1.6e-35 120.7 0.4 1.3 1 0 0 1 1 1 1 Aconitase X swivel domain DUF521 PF04412.13 gi|21227627|ref|NP_633549.1| - 6.3e-157 522.4 0.2 7.1e-157 522.2 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) zinc_ribbon_4 PF13717.6 gi|21227627|ref|NP_633549.1| - 2.4 8.1 5.8 93 3.1 0.4 3.6 4 0 0 4 4 4 0 zinc-ribbon domain UbiD PF01977.16 gi|21227628|ref|NP_633550.1| - 1e-115 386.9 0.8 1.2e-115 386.7 0.8 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Gln-synt_N_2 PF16952.5 gi|21227628|ref|NP_633550.1| - 0.12 12.3 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 Glutamine synthetase N-terminal domain Citrate_synt PF00285.21 gi|21227629|ref|NP_633551.1| - 4.1e-115 384.7 0.0 4.5e-115 384.6 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Aconitase PF00330.20 gi|161485674|ref|NP_633552.2| - 3.1e-178 593.5 0.0 4.2e-178 593.1 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|161485674|ref|NP_633552.2| - 1.9e-40 138.2 0.0 4.8e-40 136.9 0.0 1.7 1 0 0 1 1 1 1 Aconitase C-terminal domain DUF5069 PF16798.5 gi|21227631|ref|NP_633553.1| - 0.0055 16.9 0.0 0.013 15.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5069) DUF496 PF04363.12 gi|21227631|ref|NP_633553.1| - 0.02 14.9 0.0 0.043 13.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF496) Phage_int_SAM_5 PF13102.6 gi|21227631|ref|NP_633553.1| - 0.079 13.3 0.0 0.15 12.4 0.0 1.6 1 0 0 1 1 1 0 Phage integrase SAM-like domain Arg_decarb_HB PF17810.1 gi|21227631|ref|NP_633553.1| - 0.14 12.4 0.1 0.26 11.6 0.1 1.4 1 0 0 1 1 1 0 Arginine decarboxylase helical bundle domain VWA_2 PF13519.6 gi|21227632|ref|NP_633554.1| - 1.4e-12 48.2 0.1 5.4e-12 46.3 0.0 2.0 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA PF00092.28 gi|21227632|ref|NP_633554.1| - 6e-09 36.4 0.1 1.9e-08 34.7 0.1 1.9 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|21227632|ref|NP_633554.1| - 1e-07 31.6 0.0 1.7e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_3 PF13768.6 gi|21227632|ref|NP_633554.1| - 3.5e-07 30.3 0.0 6.6e-07 29.4 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF2201 PF09967.9 gi|21227632|ref|NP_633554.1| - 0.011 15.8 0.0 0.025 14.7 0.0 1.6 1 0 0 1 1 1 0 VWA-like domain (DUF2201) CobT_C PF11775.8 gi|21227632|ref|NP_633554.1| - 0.03 14.0 0.1 0.29 10.7 0.0 2.3 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT VWA domain ALMT PF11744.8 gi|21227632|ref|NP_633554.1| - 0.56 9.0 2.4 0.84 8.4 2.4 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter AAA_5 PF07728.14 gi|21227633|ref|NP_633555.1| - 5.2e-28 97.8 0.0 9.4e-28 96.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_8 PF17868.1 gi|21227633|ref|NP_633555.1| - 4.1e-20 71.4 2.4 7.9e-20 70.5 1.4 2.1 2 0 0 2 2 2 1 AAA lid domain AAA_3 PF07726.11 gi|21227633|ref|NP_633555.1| - 8.6e-07 28.9 0.0 1.4e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 gi|21227633|ref|NP_633555.1| - 1.1e-06 29.1 0.0 3.7e-06 27.4 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 gi|21227633|ref|NP_633555.1| - 0.00034 20.1 0.6 0.56 9.5 0.1 2.7 2 1 0 2 2 2 2 KaiC AAA_16 PF13191.6 gi|21227633|ref|NP_633555.1| - 0.0033 17.8 0.0 0.02 15.3 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain Mg_chelatase PF01078.21 gi|21227633|ref|NP_633555.1| - 0.0076 15.7 0.1 0.025 14.0 0.0 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI DASH_Spc34 PF08657.10 gi|21227633|ref|NP_633555.1| - 0.01 15.7 2.0 0.027 14.3 2.0 1.7 1 0 0 1 1 1 0 DASH complex subunit Spc34 Sigma54_activat PF00158.26 gi|21227633|ref|NP_633555.1| - 0.047 13.4 0.0 0.49 10.1 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 gi|21227633|ref|NP_633555.1| - 0.053 13.0 0.0 0.17 11.4 0.0 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region RuvB_N PF05496.12 gi|21227633|ref|NP_633555.1| - 0.069 12.9 0.1 0.18 11.5 0.1 1.6 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain UPF0270 PF06794.12 gi|21227633|ref|NP_633555.1| - 0.13 12.3 0.9 13 6.0 0.1 2.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0270) zf-UBR PF02207.20 gi|21227633|ref|NP_633555.1| - 0.15 12.2 0.1 0.28 11.4 0.1 1.3 1 0 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) Wtap PF17098.5 gi|21227633|ref|NP_633555.1| - 0.65 9.9 3.5 8.8 6.2 0.1 3.1 3 0 0 3 3 3 0 WTAP/Mum2p family YusW PF14039.6 gi|21227633|ref|NP_633555.1| - 2.4 8.7 6.1 5.3 7.6 2.6 2.7 2 0 0 2 2 2 0 YusW-like protein DUF5485 PF17586.2 gi|21227634|ref|NP_633556.1| - 0.1 12.9 7.5 1.9 8.9 0.8 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5485) DUF2909 PF11137.8 gi|21227634|ref|NP_633556.1| - 0.13 12.2 0.3 0.13 12.2 0.3 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2909) DUF2070 PF09843.9 gi|21227634|ref|NP_633556.1| - 0.17 10.2 2.1 0.19 10.0 2.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ThiF PF00899.21 gi|21227635|ref|NP_633557.1| - 8.6e-66 221.8 0.0 1e-65 221.5 0.0 1.0 1 0 0 1 1 1 1 ThiF family Shikimate_DH PF01488.20 gi|21227635|ref|NP_633557.1| - 0.07 13.2 0.1 0.43 10.7 0.0 2.0 1 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Aldolase_II PF00596.21 gi|21227637|ref|NP_633559.1| - 2.5e-34 118.8 0.1 2.8e-34 118.7 0.1 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain CDP-OH_P_transf PF01066.21 gi|21227638|ref|NP_633560.1| - 7.3e-13 49.1 0.2 7.3e-13 49.1 0.2 2.7 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Archease PF01951.16 gi|21227639|ref|NP_633561.1| - 2.1e-48 164.1 1.0 2.3e-48 163.9 1.0 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) RtcB PF01139.17 gi|21227640|ref|NP_633562.1| - 9.3e-172 571.8 0.3 1.1e-171 571.6 0.3 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB MtrH PF02007.18 gi|21227642|ref|NP_633564.1| - 1.3e-148 494.1 0.5 1.4e-148 493.9 0.5 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit MtrG PF04210.13 gi|21227643|ref|NP_633565.1| - 1.9e-31 107.7 0.8 2.1e-31 107.5 0.8 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G TIM PF00121.18 gi|21227643|ref|NP_633565.1| - 0.0031 16.9 0.0 0.0037 16.7 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase MtrF PF09472.10 gi|21227644|ref|NP_633566.1| - 7.7e-30 102.1 1.7 8.7e-30 101.9 1.7 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrA PF04208.14 gi|21227645|ref|NP_633567.1| - 1e-83 279.2 0.3 1.3e-83 278.8 0.3 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.10 gi|21227645|ref|NP_633567.1| - 0.0095 15.3 0.3 0.024 14.0 0.3 1.7 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrB PF05440.12 gi|21227646|ref|NP_633568.1| - 8.5e-38 128.7 0.0 1e-37 128.4 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrC PF04211.13 gi|21227647|ref|NP_633569.1| - 4.2e-109 363.8 30.8 4.8e-109 363.6 30.8 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C ACT_7 PF13840.6 gi|21227647|ref|NP_633569.1| - 0.82 9.5 3.4 1.6 8.6 0.1 2.6 2 0 0 2 2 2 0 ACT domain MtrD PF04207.12 gi|21227648|ref|NP_633570.1| - 1.5e-101 338.6 28.3 1.8e-101 338.4 28.3 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D MtrE PF04206.12 gi|21227649|ref|NP_633571.1| - 2.9e-136 453.1 11.9 3.3e-136 452.9 11.9 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E DUF1673 PF07895.11 gi|21227649|ref|NP_633571.1| - 0.019 14.7 2.2 1.6 8.4 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1673) DUF3611 PF12263.8 gi|21227649|ref|NP_633571.1| - 0.12 12.3 0.1 0.12 12.3 0.1 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF3611) AP_endonuc_2 PF01261.24 gi|21227650|ref|NP_633572.1| - 9.2e-24 84.0 0.0 1.1e-23 83.8 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel SSF PF00474.17 gi|21227651|ref|NP_633573.1| - 5.9e-36 124.2 30.8 1.5e-35 122.9 30.2 1.8 2 0 0 2 2 2 1 Sodium:solute symporter family Nramp PF01566.18 gi|21227651|ref|NP_633573.1| - 0.13 11.3 32.0 0.0069 15.4 12.6 2.9 3 1 0 3 3 3 0 Natural resistance-associated macrophage protein TOBE PF03459.17 gi|21227652|ref|NP_633574.1| - 2.5e-16 59.7 0.2 4.3e-16 59.0 0.2 1.4 1 0 0 1 1 1 1 TOBE domain HTH_1 PF00126.27 gi|21227652|ref|NP_633574.1| - 2e-11 43.7 0.0 3.3e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LZ_Tnp_IS481 PF13011.6 gi|21227652|ref|NP_633574.1| - 0.06 13.9 0.0 1 9.9 0.0 2.2 2 0 0 2 2 2 0 leucine-zipper of insertion element IS481 TOBE_2 PF08402.10 gi|21227652|ref|NP_633574.1| - 0.063 13.5 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 TOBE domain TUG-UBL1 PF11470.8 gi|21227652|ref|NP_633574.1| - 0.09 13.0 0.0 8.1 6.8 0.0 2.3 2 0 0 2 2 2 0 TUG ubiquitin-like domain ENT PF03735.14 gi|21227652|ref|NP_633574.1| - 0.14 12.2 0.0 0.44 10.6 0.0 1.8 1 0 0 1 1 1 0 ENT domain NPCBM_assoc PF10633.9 gi|21227653|ref|NP_633575.1| - 6.4e-09 35.9 0.1 0.011 16.0 0.0 3.3 3 0 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|21227653|ref|NP_633575.1| - 0.021 15.0 0.7 0.27 11.5 0.0 2.8 3 1 0 3 3 3 0 CARDB NPCBM_assoc PF10633.9 gi|21227654|ref|NP_633576.1| - 0.00031 20.9 0.1 0.17 12.2 0.0 3.1 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4832 PF16116.5 gi|21227654|ref|NP_633576.1| - 0.027 14.3 1.4 0.16 11.8 0.9 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4832) Gryzun PF07919.12 gi|21227654|ref|NP_633576.1| - 0.27 9.9 4.9 0.33 9.7 1.7 2.0 1 1 1 2 2 2 0 Gryzun, putative trafficking through Golgi LRRC37AB_C PF14914.6 gi|21227654|ref|NP_633576.1| - 0.37 10.7 0.1 0.37 10.7 0.1 2.0 3 0 0 3 3 3 0 LRRC37A/B like protein 1 C-terminal domain MMPL PF03176.15 gi|21227655|ref|NP_633577.1| - 2.8e-55 187.6 15.1 3e-27 95.5 0.2 2.1 2 0 0 2 2 2 2 MMPL family Sterol-sensing PF12349.8 gi|21227655|ref|NP_633577.1| - 9.1e-16 58.1 6.6 7.9e-08 32.3 0.4 2.6 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation Patched PF02460.18 gi|21227655|ref|NP_633577.1| - 7.3e-11 40.9 17.4 4.9e-05 21.6 0.2 3.1 3 0 0 3 3 3 3 Patched family SecD_SecF PF02355.16 gi|21227655|ref|NP_633577.1| - 1.1e-09 37.9 7.7 1.1e-09 37.9 7.7 2.5 2 0 0 2 2 2 1 Protein export membrane protein ACR_tran PF00873.19 gi|21227655|ref|NP_633577.1| - 2.6e-07 28.7 26.4 5e-05 21.2 9.2 2.2 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family QCR10 PF09796.9 gi|21227655|ref|NP_633577.1| - 0.062 13.4 1.4 0.19 11.8 0.1 2.5 2 0 0 2 2 2 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) TrmB PF01978.19 gi|21227656|ref|NP_633578.1| - 7.4e-24 83.4 0.4 1.2e-23 82.8 0.4 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|21227656|ref|NP_633578.1| - 2.2e-05 23.7 0.0 3.1e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_27 PF13463.6 gi|21227656|ref|NP_633578.1| - 0.0012 19.2 0.1 0.0099 16.4 0.1 2.2 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|21227656|ref|NP_633578.1| - 0.002 17.9 0.1 0.0038 17.0 0.1 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_34 PF13601.6 gi|21227656|ref|NP_633578.1| - 0.0049 17.0 0.0 0.021 15.0 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain GntR PF00392.21 gi|21227656|ref|NP_633578.1| - 0.007 16.0 0.0 0.023 14.3 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 gi|21227656|ref|NP_633578.1| - 0.041 14.2 0.0 0.084 13.2 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator Helicase_C_2 PF13307.6 gi|21227656|ref|NP_633578.1| - 0.082 13.1 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Helicase C-terminal domain HTH_20 PF12840.7 gi|21227656|ref|NP_633578.1| - 0.11 12.6 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Lactamase_B_3 PF13483.6 gi|21227657|ref|NP_633579.1| - 1.3e-36 125.9 0.0 1.6e-36 125.7 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|21227657|ref|NP_633579.1| - 1.8e-14 53.7 0.0 2.8e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|21227657|ref|NP_633579.1| - 0.0016 18.5 0.6 0.22 11.5 0.2 2.3 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Rpr2 PF04032.16 gi|21227658|ref|NP_633580.1| - 5.3e-16 58.7 0.1 8.3e-16 58.1 0.1 1.3 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF4674 PF15719.5 gi|21227658|ref|NP_633580.1| - 4.2e-05 23.7 1.3 0.052 13.6 0.1 2.4 1 1 1 2 2 2 2 Domain of unknown function (DUF4674) DZR PF12773.7 gi|21227658|ref|NP_633580.1| - 0.041 13.9 0.2 0.07 13.2 0.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon TraT PF05818.12 gi|21227658|ref|NP_633580.1| - 0.11 12.2 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein CpXC PF14353.6 gi|21227658|ref|NP_633580.1| - 0.17 12.0 0.9 0.66 10.0 0.1 2.0 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_6 PF14599.6 gi|21227658|ref|NP_633580.1| - 0.27 11.3 2.6 7.2 6.7 0.0 2.8 2 1 0 2 2 2 0 Zinc-ribbon ADD_ATRX PF17981.1 gi|21227658|ref|NP_633580.1| - 0.49 10.3 3.5 3.6 7.5 0.6 2.4 1 1 1 2 2 2 0 Cysteine Rich ADD domain SRP19 PF01922.17 gi|21227659|ref|NP_633581.1| - 1.4e-22 80.5 0.1 1.8e-22 80.1 0.1 1.2 1 0 0 1 1 1 1 SRP19 protein Pilin_N PF07790.11 gi|21227662|ref|NP_633584.1| - 6.1e-12 46.3 0.2 2.6e-11 44.3 0.0 2.0 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Arch_flagellin PF01917.16 gi|21227662|ref|NP_633584.1| - 0.0088 16.2 3.2 0.31 11.2 1.1 2.2 2 0 0 2 2 2 2 Archaebacterial flagellin PBP_like_2 PF12849.7 gi|21227663|ref|NP_633585.1| - 1.3e-28 100.5 0.7 1.7e-28 100.1 0.7 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|21227663|ref|NP_633585.1| - 7.7e-13 48.7 0.0 3.9e-12 46.4 0.0 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|21227663|ref|NP_633585.1| - 0.00063 19.8 0.1 0.84 9.5 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|21227664|ref|NP_633586.1| - 2.2e-14 53.6 22.8 2.9e-14 53.2 22.8 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|21227665|ref|NP_633587.1| - 4e-33 114.8 0.0 9.2e-33 113.7 0.0 1.6 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 gi|21227665|ref|NP_633587.1| - 6.9e-12 45.5 0.0 1.7e-11 44.3 0.0 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 gi|21227665|ref|NP_633587.1| - 3.1e-11 43.6 0.4 6.1e-06 26.2 0.1 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 gi|21227665|ref|NP_633587.1| - 6.1e-09 35.9 0.0 1.3e-08 34.9 0.0 1.6 1 0 0 1 1 1 1 TOBE domain AAA_15 PF13175.6 gi|21227665|ref|NP_633587.1| - 9.8e-09 35.4 4.0 1.8e-05 24.6 0.1 2.5 3 0 0 3 3 3 2 AAA ATPase domain AAA_22 PF13401.6 gi|21227665|ref|NP_633587.1| - 3e-06 27.5 0.2 3.5e-05 24.1 0.2 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|21227665|ref|NP_633587.1| - 2.3e-05 24.0 2.0 0.00096 18.6 0.3 2.9 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|21227665|ref|NP_633587.1| - 0.026 14.9 0.0 0.048 14.0 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|21227665|ref|NP_633587.1| - 0.026 14.2 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 gi|21227665|ref|NP_633587.1| - 0.036 13.6 0.0 0.064 12.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_23 PF13476.6 gi|21227665|ref|NP_633587.1| - 0.059 13.9 3.4 0.049 14.1 0.7 2.3 2 1 0 2 2 2 0 AAA domain ResIII PF04851.15 gi|21227665|ref|NP_633587.1| - 0.073 13.1 0.2 0.26 11.3 0.0 1.9 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit CheB_methylest PF01339.17 gi|21227665|ref|NP_633587.1| - 0.078 12.7 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 CheB methylesterase DEAD PF00270.29 gi|21227665|ref|NP_633587.1| - 0.097 12.4 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase SbcCD_C PF13558.6 gi|21227665|ref|NP_633587.1| - 0.12 12.7 0.0 1.4 9.2 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 gi|21227665|ref|NP_633587.1| - 0.15 11.7 0.1 0.31 10.7 0.1 1.7 1 1 0 1 1 1 0 AAA domain FmdE PF02663.14 gi|21227666|ref|NP_633588.1| - 3.3e-26 91.9 0.0 4.6e-26 91.4 0.0 1.2 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Fer4 PF00037.27 gi|21227667|ref|NP_633589.1| - 6.6e-52 171.4 84.0 2.4e-08 33.5 1.7 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21227667|ref|NP_633589.1| - 1.4e-40 137.7 109.6 7.7e-10 39.2 12.6 5.8 3 2 4 7 7 7 7 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227667|ref|NP_633589.1| - 8.2e-33 113.2 53.6 3.4e-10 40.7 5.9 7.2 7 0 0 7 7 7 7 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|21227667|ref|NP_633589.1| - 1.4e-32 110.4 82.8 2.2e-06 27.5 3.2 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21227667|ref|NP_633589.1| - 6e-31 106.4 61.2 4.2e-09 36.4 5.4 6.3 5 1 2 7 7 7 7 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227667|ref|NP_633589.1| - 9.4e-31 105.7 55.3 4.9e-10 39.4 6.5 5.9 5 2 1 6 6 6 6 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21227667|ref|NP_633589.1| - 1.3e-29 102.1 63.2 5.1e-09 36.1 9.5 6.6 4 2 3 7 7 7 6 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227667|ref|NP_633589.1| - 1.6e-20 71.9 79.7 1e-05 25.3 2.3 8.3 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21227667|ref|NP_633589.1| - 8.8e-20 70.9 51.3 3.3e-08 33.9 3.1 6.0 5 1 0 5 5 5 4 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21227667|ref|NP_633589.1| - 1.6e-19 70.2 50.6 2.5e-05 24.7 9.5 5.9 5 1 0 5 5 5 5 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227667|ref|NP_633589.1| - 4.5e-16 58.0 74.7 0.00045 20.5 2.3 8.3 8 0 0 8 8 8 6 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21227667|ref|NP_633589.1| - 2.5e-12 46.8 102.6 0.0017 19.1 5.8 8.3 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21227667|ref|NP_633589.1| - 5.6e-09 36.2 57.6 0.037 14.2 1.2 7.7 4 1 4 8 8 8 5 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21227667|ref|NP_633589.1| - 1.2e-05 26.0 67.8 0.02 15.7 0.9 8.1 5 2 3 9 9 9 4 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21227667|ref|NP_633589.1| - 0.0016 18.9 79.3 0.055 14.0 2.8 8.2 7 1 0 7 7 7 3 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|21227667|ref|NP_633589.1| - 0.012 16.4 5.4 0.11 13.3 0.5 9.0 7 3 1 8 8 7 0 4Fe-4S single cluster domain ETF_QO PF05187.13 gi|21227667|ref|NP_633589.1| - 2.4 8.3 37.1 4.5 7.4 1.5 5.8 3 2 3 6 6 6 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Amidohydro_3 PF07969.11 gi|21227668|ref|NP_633590.1| - 3.7e-102 343.2 0.2 4.3e-102 343.0 0.2 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|21227668|ref|NP_633590.1| - 8.4e-07 28.6 0.1 0.0033 16.8 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase family DUF1996 PF09362.10 gi|21227668|ref|NP_633590.1| - 0.11 12.5 0.3 0.96 9.4 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1996) GXGXG PF01493.19 gi|21227669|ref|NP_633591.1| - 6.1e-07 29.2 23.0 2e-06 27.6 21.2 2.3 1 1 0 1 1 1 1 GXGXG motif Molydop_binding PF01568.21 gi|21227670|ref|NP_633592.1| - 6e-11 42.4 0.0 8.8e-11 41.8 0.0 1.3 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdopterin PF00384.22 gi|21227671|ref|NP_633593.1| - 1.8e-15 56.8 0.0 6.7e-15 55.0 0.0 1.8 1 1 0 1 1 1 1 Molybdopterin oxidoreductase TPP_enzyme_M PF00205.22 gi|21227671|ref|NP_633593.1| - 0.098 12.4 0.0 0.24 11.1 0.0 1.7 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Cyt-b5 PF00173.28 gi|21227672|ref|NP_633594.1| - 5.7e-10 39.2 0.1 8.7e-10 38.6 0.1 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DUF4969 PF16339.5 gi|21227672|ref|NP_633594.1| - 0.15 12.4 0.2 0.89 9.9 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4969) OAD_gamma PF04277.13 gi|21227672|ref|NP_633594.1| - 0.19 12.3 0.0 0.31 11.7 0.0 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain SIMPL PF04402.14 gi|21227673|ref|NP_633595.1| - 3.3e-48 164.8 11.2 3.9e-48 164.6 11.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) YbaB_DNA_bd PF02575.16 gi|21227673|ref|NP_633595.1| - 0.11 12.8 5.1 0.065 13.5 1.0 2.6 2 1 0 2 2 2 0 YbaB/EbfC DNA-binding family DUF4448 PF14610.6 gi|21227673|ref|NP_633595.1| - 0.36 10.6 3.4 0.5 10.1 0.1 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF4448) Amnionless PF14828.6 gi|21227673|ref|NP_633595.1| - 6.3 5.5 5.5 1.4 7.7 1.1 1.9 1 1 1 2 2 2 0 Amnionless Acetyltransf_6 PF13480.7 gi|21227674|ref|NP_633596.1| - 6.1e-10 39.4 0.0 6.1e-09 36.2 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|21227674|ref|NP_633596.1| - 0.019 13.8 0.0 0.52 9.1 0.0 2.6 3 0 0 3 3 3 0 FemAB family Acetyltransf_9 PF13527.7 gi|21227674|ref|NP_633596.1| - 0.056 13.5 0.0 0.16 12.0 0.0 1.8 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DUF4301 PF14134.6 gi|21227674|ref|NP_633596.1| - 0.15 10.8 0.0 0.22 10.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) MULE PF10551.9 gi|21227675|ref|NP_633597.1| - 0.00039 20.8 0.0 0.00093 19.6 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|21227675|ref|NP_633597.1| - 0.00062 19.3 0.2 0.0064 16.0 0.2 2.0 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.18 gi|21227675|ref|NP_633597.1| - 0.031 14.0 1.5 0.045 13.5 0.7 1.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Methyltransf_25 PF13649.6 gi|21227676|ref|NP_633598.1| - 1.9e-13 50.9 0.0 3e-13 50.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21227676|ref|NP_633598.1| - 1e-11 44.6 0.0 2.9e-11 43.2 0.0 1.6 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_12 PF08242.12 gi|21227676|ref|NP_633598.1| - 8.5e-11 42.5 0.0 1.3e-10 41.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21227676|ref|NP_633598.1| - 4.8e-10 40.0 0.0 7.5e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227676|ref|NP_633598.1| - 9.2e-10 38.5 0.0 1.1e-09 38.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21227676|ref|NP_633598.1| - 2.1e-09 37.4 0.0 3.5e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21227676|ref|NP_633598.1| - 4.9e-06 26.4 0.0 7e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|21227676|ref|NP_633598.1| - 0.00025 20.4 0.0 0.00039 19.8 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.17 gi|21227676|ref|NP_633598.1| - 0.0015 18.1 0.0 0.0025 17.3 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|21227676|ref|NP_633598.1| - 0.003 17.1 0.0 0.0074 15.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|21227676|ref|NP_633598.1| - 0.0037 17.2 0.0 0.011 15.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain NodS PF05401.11 gi|21227676|ref|NP_633598.1| - 0.0082 15.8 0.0 0.018 14.6 0.0 1.6 2 0 0 2 2 2 1 Nodulation protein S (NodS) PrmA PF06325.13 gi|21227676|ref|NP_633598.1| - 0.016 14.6 0.0 0.021 14.2 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) HMW1C_N PF18071.1 gi|21227676|ref|NP_633598.1| - 0.022 14.5 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 HMW1C N-terminal TPMT PF05724.11 gi|21227676|ref|NP_633598.1| - 0.034 13.8 0.0 0.042 13.5 0.0 1.1 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_15 PF09445.10 gi|21227676|ref|NP_633598.1| - 0.047 13.3 0.0 0.068 12.7 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase DUF364 PF04016.12 gi|21227678|ref|NP_633600.1| - 3.1e-42 143.6 0.0 4.4e-42 143.1 0.0 1.2 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF4213 PF13938.6 gi|21227678|ref|NP_633600.1| - 4.6e-19 68.4 0.0 7.3e-19 67.8 0.0 1.3 1 0 0 1 1 1 1 Putative heavy-metal chelation QRPTase_C PF01729.19 gi|21227679|ref|NP_633601.1| - 1.8e-27 96.2 0.0 3.2e-27 95.4 0.0 1.4 1 1 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|21227679|ref|NP_633601.1| - 1.3e-11 44.4 0.0 2.4e-11 43.5 0.0 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain B12-binding PF02310.19 gi|21227679|ref|NP_633601.1| - 0.14 12.2 0.0 5.2 7.1 0.0 2.2 2 0 0 2 2 2 0 B12 binding domain Tropomodulin PF03250.14 gi|21227679|ref|NP_633601.1| - 0.21 11.6 0.7 0.33 11.0 0.1 1.6 2 0 0 2 2 2 0 Tropomodulin ABC_tran PF00005.27 gi|21227680|ref|NP_633602.1| - 3e-31 108.8 0.0 4.9e-31 108.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 gi|21227680|ref|NP_633602.1| - 3.2e-16 59.4 0.2 2.3e-14 53.4 0.1 3.0 2 1 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 gi|21227680|ref|NP_633602.1| - 6.9e-08 32.6 0.2 0.0076 16.1 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21227680|ref|NP_633602.1| - 8.7e-06 25.3 0.1 0.00028 20.4 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|21227680|ref|NP_633602.1| - 0.0002 21.5 0.2 0.0053 17.0 0.2 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 gi|21227680|ref|NP_633602.1| - 0.0016 18.7 0.0 0.0042 17.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain TOBE_2 PF08402.10 gi|21227680|ref|NP_633602.1| - 0.0079 16.3 0.1 0.022 14.9 0.1 1.8 1 1 0 1 1 1 1 TOBE domain AAA_16 PF13191.6 gi|21227680|ref|NP_633602.1| - 0.013 15.9 0.0 0.023 15.1 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain T2SSE PF00437.20 gi|21227680|ref|NP_633602.1| - 0.028 13.5 0.0 0.065 12.3 0.0 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_29 PF13555.6 gi|21227680|ref|NP_633602.1| - 0.035 13.8 0.1 0.071 12.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Mg_chelatase PF01078.21 gi|21227680|ref|NP_633602.1| - 0.092 12.1 0.0 0.33 10.3 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI NACHT PF05729.12 gi|21227680|ref|NP_633602.1| - 0.16 11.9 0.3 1.3 8.9 0.0 2.1 2 0 0 2 2 2 0 NACHT domain IstB_IS21 PF01695.17 gi|21227680|ref|NP_633602.1| - 0.16 11.7 0.1 4.8 6.9 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein BPD_transp_1 PF00528.22 gi|21227681|ref|NP_633603.1| - 1.9e-17 63.6 12.9 1.9e-17 63.6 12.9 1.8 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component K1 PF02960.14 gi|21227681|ref|NP_633603.1| - 2.9 8.0 5.5 20 5.3 0.5 2.2 1 1 1 2 2 2 0 K1 glycoprotein SBP_bac_11 PF13531.6 gi|21227682|ref|NP_633604.1| - 1.4e-43 149.3 0.0 1.6e-43 149.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.20 gi|21227682|ref|NP_633604.1| - 0.00017 21.1 0.0 0.00033 20.1 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 gi|21227682|ref|NP_633604.1| - 0.0016 18.1 0.0 0.0045 16.6 0.0 1.7 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_8 PF13416.6 gi|21227682|ref|NP_633604.1| - 0.045 13.6 0.5 1.1 9.0 0.2 2.1 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein YhfZ_C PF14503.6 gi|21227682|ref|NP_633604.1| - 0.049 13.2 0.4 0.071 12.7 0.4 1.2 1 0 0 1 1 1 0 YhfZ C-terminal domain Flavodoxin_2 PF02525.17 gi|21227683|ref|NP_633605.1| - 1.4e-55 188.1 0.1 1.8e-55 187.8 0.1 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 gi|21227683|ref|NP_633605.1| - 1.7e-15 57.1 0.0 3.6e-14 52.8 0.0 2.3 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Pox_A_type_inc PF04508.12 gi|21227683|ref|NP_633605.1| - 0.27 11.2 1.2 0.54 10.2 1.2 1.5 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat FMN_red PF03358.15 gi|21227684|ref|NP_633606.1| - 2.1e-32 112.0 0.0 2.7e-32 111.6 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21227684|ref|NP_633606.1| - 9.4e-10 38.5 0.0 1.1e-09 38.3 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold DUF2284 PF10050.9 gi|21227684|ref|NP_633606.1| - 0.012 15.4 0.2 0.018 14.8 0.2 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Rossmann-like PF10727.9 gi|21227684|ref|NP_633606.1| - 0.098 12.5 0.0 0.18 11.7 0.0 1.5 1 1 0 1 1 1 0 Rossmann-like domain Rep_1B PF17873.1 gi|21227684|ref|NP_633606.1| - 0.2 11.5 1.6 2.5 8.0 0.1 2.3 2 0 0 2 2 2 0 Replicase polyprotein 1ab ABM PF03992.16 gi|21227685|ref|NP_633607.1| - 3.3e-19 68.8 0.0 4.2e-19 68.4 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Xpo1 PF08389.12 gi|21227685|ref|NP_633607.1| - 0.018 15.1 0.2 0.14 12.2 0.2 1.9 1 1 0 1 1 1 0 Exportin 1-like protein Nitroreductase PF00881.24 gi|21227686|ref|NP_633608.1| - 3.8e-32 111.7 0.6 1.3e-16 61.1 0.2 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|21227686|ref|NP_633608.1| - 1.7e-13 50.7 0.1 1.4e-05 24.8 0.1 3.1 1 1 2 3 3 3 3 Putative TM nitroreductase FMN_red PF03358.15 gi|21227687|ref|NP_633609.1| - 2.6e-25 89.0 0.0 3e-25 88.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21227687|ref|NP_633609.1| - 1.1e-13 51.3 0.0 1.3e-13 51.1 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|21227687|ref|NP_633609.1| - 0.0042 17.3 0.0 0.0067 16.7 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain HxlR PF01638.17 gi|21227688|ref|NP_633610.1| - 1.3e-33 114.7 0.1 1.6e-33 114.4 0.1 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR PF01047.22 gi|21227688|ref|NP_633610.1| - 0.0033 17.3 0.0 0.0048 16.8 0.0 1.3 1 0 0 1 1 1 1 MarR family PadR PF03551.14 gi|21227688|ref|NP_633610.1| - 0.012 15.6 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family B-block_TFIIIC PF04182.12 gi|21227688|ref|NP_633610.1| - 0.038 14.1 0.0 0.058 13.6 0.0 1.4 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_24 PF13412.6 gi|21227688|ref|NP_633610.1| - 0.054 13.1 0.0 0.096 12.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|21227688|ref|NP_633610.1| - 0.061 13.5 0.0 0.092 12.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|21227688|ref|NP_633610.1| - 0.1 12.7 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21227688|ref|NP_633610.1| - 0.14 12.1 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|21227688|ref|NP_633610.1| - 0.19 12.1 0.0 0.26 11.6 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Helicase_C_2 PF13307.6 gi|21227689|ref|NP_633611.1| - 8.5e-29 100.9 0.0 2e-28 99.7 0.0 1.6 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|21227689|ref|NP_633611.1| - 2.5e-15 56.6 1.8 1.6e-14 53.9 1.8 2.0 1 1 0 1 1 1 1 DEAD_2 ResIII PF04851.15 gi|21227689|ref|NP_633611.1| - 7.3e-08 32.6 1.5 4.8e-06 26.7 1.5 2.3 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit PhoH PF02562.16 gi|21227689|ref|NP_633611.1| - 8.7e-05 22.1 0.1 0.00034 20.1 0.0 1.9 2 0 0 2 2 2 1 PhoH-like protein DEAD PF00270.29 gi|21227689|ref|NP_633611.1| - 0.00019 21.3 0.1 0.0049 16.6 0.0 2.6 3 0 0 3 3 3 1 DEAD/DEAH box helicase Zot PF05707.12 gi|21227689|ref|NP_633611.1| - 0.00024 20.8 0.1 0.42 10.2 0.0 2.4 2 0 0 2 2 2 2 Zonular occludens toxin (Zot) HBB PF06777.11 gi|21227689|ref|NP_633611.1| - 0.0007 19.3 0.5 0.004 16.9 0.0 2.3 2 0 0 2 2 2 1 Helical and beta-bridge domain DUF2075 PF09848.9 gi|21227689|ref|NP_633611.1| - 0.021 14.1 0.0 1.1 8.4 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ATPase PF06745.13 gi|21227689|ref|NP_633611.1| - 0.031 13.6 0.0 0.057 12.8 0.0 1.3 1 0 0 1 1 1 0 KaiC Sigma54_activat PF00158.26 gi|21227689|ref|NP_633611.1| - 0.041 13.6 0.1 0.12 12.1 0.1 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain HTH_56 PF18662.1 gi|21227689|ref|NP_633611.1| - 0.042 13.9 2.7 3.1 7.9 0.0 2.9 3 0 0 3 3 3 0 Cch helix turn helix domain AAA_34 PF13872.6 gi|21227689|ref|NP_633611.1| - 0.12 11.2 0.0 0.25 10.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 AAA_30 PF13604.6 gi|21227689|ref|NP_633611.1| - 0.18 11.5 0.0 0.39 10.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|21227689|ref|NP_633611.1| - 0.57 10.6 6.7 12 6.3 3.4 3.2 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|21227689|ref|NP_633611.1| - 0.91 9.2 4.0 12 5.6 4.0 2.1 1 1 0 1 1 1 0 AAA domain PKD PF00801.20 gi|21227690|ref|NP_633612.1| - 6.7e-59 195.7 43.0 1.5e-16 60.0 8.4 4.5 4 0 0 4 4 4 4 PKD domain NosD PF05048.13 gi|21227690|ref|NP_633612.1| - 3.2e-51 173.9 32.8 3.2e-51 173.9 32.8 2.0 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21227690|ref|NP_633612.1| - 1.7e-31 109.2 73.6 1.1e-17 64.4 28.3 3.2 2 1 1 3 3 3 2 Right handed beta helix region PKD_3 PF16820.5 gi|21227690|ref|NP_633612.1| - 4.3e-07 29.6 10.0 0.033 13.9 0.3 4.6 4 0 0 4 4 4 2 PKD-like domain DUF5360 PF17314.2 gi|21227690|ref|NP_633612.1| - 1e-05 25.6 0.0 1.4 9.0 0.0 4.0 4 0 0 4 4 4 2 Family of unknown function (DUF5360) DUF5013 PF16405.5 gi|21227690|ref|NP_633612.1| - 8e-05 23.0 13.5 0.43 10.8 0.1 5.4 5 0 0 5 5 5 2 Domain of unknown function (DUF5013) MG2 PF01835.19 gi|21227690|ref|NP_633612.1| - 0.00012 22.5 9.9 3.4 8.2 0.1 4.7 3 1 1 4 4 4 3 MG2 domain ThiC-associated PF13667.6 gi|21227690|ref|NP_633612.1| - 0.15 11.9 1.5 20 5.1 0.1 2.6 2 0 0 2 2 2 0 ThiC-associated domain KfrB PF18790.1 gi|21227690|ref|NP_633612.1| - 0.17 12.1 4.2 28 5.1 0.0 3.7 4 0 0 4 4 4 0 KfrB protein Cadherin PF00028.17 gi|21227690|ref|NP_633612.1| - 0.27 11.7 8.8 19 5.8 0.1 5.4 7 0 0 7 7 7 0 Cadherin domain DUF5011 PF16403.5 gi|21227690|ref|NP_633612.1| - 1.7 8.8 22.0 0.85 9.8 1.6 5.2 5 0 0 5 5 5 0 Domain of unknown function (DUF5011) NosD PF05048.13 gi|21227691|ref|NP_633613.1| - 1.3e-56 191.6 29.3 2.4e-56 190.7 27.3 2.4 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|21227691|ref|NP_633613.1| - 6.2e-32 109.3 26.7 2.3e-13 49.8 1.6 4.5 4 0 0 4 4 4 4 PKD domain Beta_helix PF13229.6 gi|21227691|ref|NP_633613.1| - 4.1e-17 62.5 27.9 4.1e-17 62.5 27.9 2.8 2 0 0 2 2 2 1 Right handed beta helix region Y_Y_Y PF07495.13 gi|21227691|ref|NP_633613.1| - 0.0017 18.3 12.9 1.8 8.6 0.4 5.1 4 0 0 4 4 4 2 Y_Y_Y domain DUF5305 PF17231.2 gi|21227691|ref|NP_633613.1| - 0.0092 15.4 0.3 0.0092 15.4 0.3 2.9 3 0 0 3 3 3 1 Family of unknown function (DUF5305) DUF3324 PF11797.8 gi|21227691|ref|NP_633613.1| - 0.033 14.2 4.0 25 4.8 0.1 4.8 5 0 0 5 5 5 0 Protein of unknown function C-terminal (DUF3324) MPDZ_u10 PF16667.5 gi|21227691|ref|NP_633613.1| - 0.086 13.7 0.1 0.55 11.2 0.2 2.4 2 0 0 2 2 2 0 Unstructured region 10 on multiple PDZ protein PKD_3 PF16820.5 gi|21227691|ref|NP_633613.1| - 0.27 11.0 9.5 9.7 6.0 0.1 4.5 4 0 0 4 4 4 0 PKD-like domain MG2 PF01835.19 gi|21227691|ref|NP_633613.1| - 0.39 11.2 5.0 7.6 7.1 0.1 4.3 4 1 0 5 5 5 0 MG2 domain Spore_YtfJ PF09579.10 gi|21227692|ref|NP_633614.1| - 1e-19 70.4 3.2 1.6e-19 69.8 3.2 1.3 1 0 0 1 1 1 1 Sporulation protein YtfJ (Spore_YtfJ) DUF2953 PF11167.8 gi|21227693|ref|NP_633615.1| - 1.1e-14 54.2 0.0 2.4e-14 53.1 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2953) Tetraspanin PF00335.20 gi|21227693|ref|NP_633615.1| - 0.081 12.6 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Tetraspanin family Srg PF02118.21 gi|21227693|ref|NP_633615.1| - 4.1 7.0 11.9 0.2 11.3 5.8 1.7 2 0 0 2 2 2 0 Srg family chemoreceptor Sigma_reg_N PF13800.6 gi|21227693|ref|NP_633615.1| - 8.9 6.7 7.7 1.6 9.0 3.8 1.8 2 0 0 2 2 2 0 Sigma factor regulator N-terminal GHMP_kinases_N PF00288.26 gi|21227694|ref|NP_633616.1| - 5.3e-10 39.4 1.3 1.3e-09 38.2 1.3 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|21227694|ref|NP_633616.1| - 3.8e-07 30.4 0.0 7e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal Nop PF01798.18 gi|21227695|ref|NP_633617.1| - 1.5e-53 181.7 0.0 9.2e-53 179.1 0.0 2.0 1 1 0 1 1 1 1 snoRNA binding domain, fibrillarin Fibrillarin PF01269.17 gi|21227696|ref|NP_633618.1| - 4.9e-89 297.3 0.0 5.7e-89 297.1 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin HTH_5 PF01022.20 gi|21227697|ref|NP_633619.1| - 4.9e-10 39.1 0.3 7.8e-10 38.5 0.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21227697|ref|NP_633619.1| - 3.6e-09 36.6 0.2 6.1e-09 35.8 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|21227697|ref|NP_633619.1| - 1.3e-05 24.7 0.0 6.2e-05 22.5 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|21227697|ref|NP_633619.1| - 6.7e-05 22.7 0.0 0.00016 21.5 0.0 1.6 2 0 0 2 2 2 1 MarR family DUF4430 PF14478.6 gi|21227697|ref|NP_633619.1| - 0.00034 21.1 1.0 0.0013 19.3 1.0 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4430) MarR_2 PF12802.7 gi|21227697|ref|NP_633619.1| - 0.00074 19.4 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|21227697|ref|NP_633619.1| - 0.0039 17.0 0.2 0.047 13.6 0.2 2.3 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 gi|21227697|ref|NP_633619.1| - 0.0071 16.1 0.1 0.013 15.2 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HxlR PF01638.17 gi|21227697|ref|NP_633619.1| - 0.0098 15.7 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|21227697|ref|NP_633619.1| - 0.051 13.6 0.0 0.16 12.0 0.0 1.8 1 1 1 2 2 2 0 Winged helix-turn-helix Rrf2 PF02082.20 gi|21227697|ref|NP_633619.1| - 0.072 13.5 0.1 0.19 12.1 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_IclR PF09339.10 gi|21227697|ref|NP_633619.1| - 0.091 12.6 0.0 0.3 10.9 0.0 1.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain Fe_dep_repress PF01325.19 gi|21227697|ref|NP_633619.1| - 0.11 12.6 0.4 0.31 11.3 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Terminase_5 PF06056.12 gi|21227697|ref|NP_633619.1| - 0.14 12.1 0.0 0.69 9.8 0.0 2.0 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) DUF2162 PF09930.9 gi|21227698|ref|NP_633620.1| - 8e-69 231.5 21.1 9e-69 231.3 21.1 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) DUF3180 PF11377.8 gi|21227698|ref|NP_633620.1| - 0.61 10.2 6.1 1.9 8.7 0.2 3.1 2 1 2 4 4 3 0 Protein of unknown function (DUF3180) ABC2_membrane_5 PF13346.6 gi|21227698|ref|NP_633620.1| - 1.3 8.6 22.0 0.79 9.2 5.8 2.3 1 1 1 2 2 2 0 ABC-2 family transporter protein MotA_ExbB PF01618.16 gi|21227699|ref|NP_633621.1| - 1.3e-11 44.3 0.0 1.8e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family VIT1 PF01988.19 gi|21227699|ref|NP_633621.1| - 0.00067 19.6 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 VIT family Spore_III_AB PF09548.10 gi|21227699|ref|NP_633621.1| - 0.034 14.3 1.1 3.2 7.8 0.1 2.6 2 1 1 3 3 3 0 Stage III sporulation protein AB (spore_III_AB) DUF2149 PF09919.9 gi|21227700|ref|NP_633622.1| - 2.4e-32 111.0 0.1 3e-32 110.7 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) Zip PF02535.22 gi|21227701|ref|NP_633623.1| - 2.4e-22 79.6 22.4 2.8e-18 66.2 4.4 2.1 2 0 0 2 2 2 2 ZIP Zinc transporter DUF1453 PF07301.11 gi|21227701|ref|NP_633623.1| - 0.027 14.5 0.6 0.027 14.5 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1453) SnoaL_2 PF12680.7 gi|21227702|ref|NP_633624.1| - 8e-10 39.3 0.0 9.1e-10 39.1 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 gi|21227702|ref|NP_633624.1| - 6.5e-06 26.0 0.0 7.2e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_3 PF13474.6 gi|21227702|ref|NP_633624.1| - 0.00086 19.6 0.1 0.0017 18.6 0.1 1.4 1 1 0 1 1 1 1 SnoaL-like domain Lumazine_bd_2 PF12893.7 gi|21227702|ref|NP_633624.1| - 0.02 15.5 0.2 0.027 15.2 0.2 1.1 1 0 0 1 1 1 0 Putative lumazine-binding CobN-Mg_chel PF02514.16 gi|21227703|ref|NP_633625.1| - 1.3e-300 1000.1 0.0 1.7e-300 999.7 0.0 1.1 1 0 0 1 1 1 1 CobN/Magnesium Chelatase SMI1_KNR4 PF09346.10 gi|21227703|ref|NP_633625.1| - 0.066 13.6 0.1 0.37 11.2 0.1 2.3 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) PAP1 PF08601.10 gi|21227703|ref|NP_633625.1| - 2 8.1 8.8 3.1 7.4 8.8 1.2 1 0 0 1 1 1 0 Transcription factor PAP1 CobN-Mg_chel PF02514.16 gi|21227704|ref|NP_633626.1| - 0 1116.1 0.0 0 1115.4 0.0 1.4 2 0 0 2 2 2 1 CobN/Magnesium Chelatase CarboxypepD_reg PF13620.6 gi|21227704|ref|NP_633626.1| - 3.2e-05 24.1 0.2 0.00013 22.1 0.2 2.0 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|21227704|ref|NP_633626.1| - 0.0026 17.7 0.0 0.0096 15.9 0.0 2.0 1 0 0 1 1 1 1 CarboxypepD_reg-like domain DUF1233 PF06806.12 gi|21227704|ref|NP_633626.1| - 0.035 13.7 0.0 0.11 12.2 0.0 1.8 1 0 0 1 1 1 0 Putative excisionase (DUF1233) SdrD_B PF17210.3 gi|21227704|ref|NP_633626.1| - 0.053 13.7 0.1 0.17 12.1 0.1 1.8 1 0 0 1 1 1 0 SdrD B-like domain Spore_coat_CotO PF14153.6 gi|21227704|ref|NP_633626.1| - 1.3 8.9 7.2 2.3 8.1 7.2 1.3 1 0 0 1 1 1 0 Spore coat protein CotO TrmO PF01980.16 gi|21227705|ref|NP_633627.1| - 1.9e-29 102.3 0.0 2.3e-29 102.0 0.0 1.1 1 0 0 1 1 1 1 tRNA-methyltransferase O FmdE PF02663.14 gi|21227706|ref|NP_633628.1| - 1e-31 109.7 0.0 1.3e-31 109.4 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.17 gi|21227706|ref|NP_633628.1| - 1.4e-07 31.3 0.9 2.9e-07 30.3 0.9 1.6 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger zinc_ribbon_9 PF14369.6 gi|21227706|ref|NP_633628.1| - 0.072 13.4 0.3 0.51 10.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon DUF4880 PF16220.5 gi|21227706|ref|NP_633628.1| - 0.11 12.3 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4880) DUF1936 PF09151.10 gi|21227706|ref|NP_633628.1| - 3.4 7.7 7.3 0.33 10.9 2.6 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) DUF1724 PF08350.10 gi|21227707|ref|NP_633629.1| - 9.3e-24 83.3 0.1 2.2e-23 82.1 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21227707|ref|NP_633629.1| - 0.038 13.9 0.0 0.067 13.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|21227707|ref|NP_633629.1| - 0.1 12.5 0.1 1 9.4 0.1 2.1 2 0 0 2 2 2 0 HTH domain Beta_lactamase3 PF17030.5 gi|21227707|ref|NP_633629.1| - 0.12 11.6 0.0 0.19 10.9 0.0 1.3 1 0 0 1 1 1 0 Putative beta-lactamase-like family IF-2B PF01008.17 gi|21227708|ref|NP_633630.1| - 1.1e-81 274.2 0.6 1.2e-81 274.0 0.6 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family Acetyltransf_1 PF00583.25 gi|21227709|ref|NP_633631.1| - 2e-15 57.0 0.0 2.3e-15 56.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|21227709|ref|NP_633631.1| - 1.1e-11 44.8 0.2 1.4e-11 44.4 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|21227709|ref|NP_633631.1| - 3.2e-11 43.5 0.1 4e-11 43.2 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21227709|ref|NP_633631.1| - 1.6e-05 24.8 0.0 2.3e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 gi|21227709|ref|NP_633631.1| - 5.4e-05 23.2 0.0 9.3e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 gi|21227709|ref|NP_633631.1| - 0.00073 20.2 0.0 0.00084 20.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|21227709|ref|NP_633631.1| - 0.0013 18.9 0.5 0.0016 18.6 0.5 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|21227709|ref|NP_633631.1| - 0.0016 18.0 0.3 0.0018 17.8 0.3 1.3 1 0 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_6 PF13480.7 gi|21227709|ref|NP_633631.1| - 0.0024 18.0 0.0 0.0028 17.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|21227709|ref|NP_633631.1| - 0.0032 17.5 0.0 0.0069 16.5 0.0 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 gi|21227709|ref|NP_633631.1| - 0.0078 15.9 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_8 PF13523.6 gi|21227709|ref|NP_633631.1| - 0.015 14.9 0.0 0.03 14.0 0.0 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 gi|21227709|ref|NP_633631.1| - 0.017 15.1 0.0 0.033 14.2 0.0 1.6 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_16 PF05301.11 gi|21227709|ref|NP_633631.1| - 0.047 13.4 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 ABC_tran PF00005.27 gi|21227710|ref|NP_633632.1| - 6e-34 117.5 0.2 1.3e-33 116.5 0.0 1.6 2 0 0 2 2 1 1 ABC transporter SMC_N PF02463.19 gi|21227710|ref|NP_633632.1| - 3.4e-09 36.5 0.2 5.3e-06 26.0 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|21227710|ref|NP_633632.1| - 5e-07 29.8 0.8 0.0063 16.4 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|21227710|ref|NP_633632.1| - 1.6e-05 25.4 0.2 2.8e-05 24.6 0.2 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|21227710|ref|NP_633632.1| - 0.00023 20.9 0.1 0.00045 19.9 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain NB-ARC PF00931.22 gi|21227710|ref|NP_633632.1| - 0.00031 20.0 0.1 0.0036 16.5 0.1 2.0 1 1 0 1 1 1 1 NB-ARC domain AAA_33 PF13671.6 gi|21227710|ref|NP_633632.1| - 0.0011 19.2 0.3 0.004 17.3 0.3 1.9 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|21227710|ref|NP_633632.1| - 0.0049 16.8 0.0 0.012 15.5 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|21227710|ref|NP_633632.1| - 0.0052 17.1 0.4 0.015 15.5 0.3 1.9 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|21227710|ref|NP_633632.1| - 0.009 15.8 0.3 0.059 13.1 0.1 2.0 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|21227710|ref|NP_633632.1| - 0.011 15.5 0.1 0.2 11.4 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_25 PF13481.6 gi|21227710|ref|NP_633632.1| - 0.02 14.5 0.2 0.17 11.4 0.3 2.1 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|21227710|ref|NP_633632.1| - 0.021 14.2 0.8 1.2 8.4 0.0 2.4 2 0 0 2 2 2 0 KaiC AAA_18 PF13238.6 gi|21227710|ref|NP_633632.1| - 0.021 15.4 0.8 0.59 10.7 0.8 2.6 1 1 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|21227710|ref|NP_633632.1| - 0.023 14.0 0.3 4.8 6.5 0.1 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family Rad17 PF03215.15 gi|21227710|ref|NP_633632.1| - 0.024 14.6 0.1 0.044 13.7 0.1 1.6 1 1 0 1 1 1 0 Rad17 P-loop domain ATP_bind_1 PF03029.17 gi|21227710|ref|NP_633632.1| - 0.027 14.2 0.1 3.2 7.5 0.1 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein SbcCD_C PF13558.6 gi|21227710|ref|NP_633632.1| - 0.04 14.2 0.1 0.81 10.0 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit T2SSE PF00437.20 gi|21227710|ref|NP_633632.1| - 0.046 12.8 0.1 0.1 11.6 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_15 PF13175.6 gi|21227710|ref|NP_633632.1| - 0.046 13.4 0.0 2.9 7.5 0.0 2.1 1 1 0 2 2 2 0 AAA ATPase domain AAA_23 PF13476.6 gi|21227710|ref|NP_633632.1| - 0.05 14.1 4.0 0.51 10.8 4.0 2.2 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|21227710|ref|NP_633632.1| - 0.17 11.6 0.3 0.38 10.4 0.2 1.7 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|21227710|ref|NP_633632.1| - 0.21 11.5 1.6 0.32 10.9 0.2 2.0 2 1 0 2 2 2 0 NACHT domain DUF87 PF01935.17 gi|21227710|ref|NP_633632.1| - 0.24 11.5 1.6 0.52 10.4 0.3 2.0 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_17 PF13207.6 gi|21227710|ref|NP_633632.1| - 0.62 10.5 2.9 20 5.6 0.3 3.0 1 1 1 3 3 3 0 AAA domain MacB_PCD PF12704.7 gi|21227711|ref|NP_633633.1| - 1e-22 81.4 0.6 1e-22 81.4 0.6 2.4 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|21227711|ref|NP_633633.1| - 3.4e-15 56.3 8.8 3.4e-15 56.3 8.8 3.3 4 0 0 4 4 4 1 FtsX-like permease family DUF2613 PF11021.8 gi|21227711|ref|NP_633633.1| - 0.16 12.1 4.3 0.5 10.5 0.1 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) DUF4849 PF16141.5 gi|21227711|ref|NP_633633.1| - 0.17 11.1 0.0 0.26 10.5 0.0 1.1 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 HRG PF16954.5 gi|21227711|ref|NP_633633.1| - 0.45 10.9 0.1 0.45 10.9 0.1 2.9 3 0 0 3 3 3 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene TcfC PF16967.5 gi|21227712|ref|NP_633634.1| - 0.0089 15.5 0.3 1.4 8.5 0.0 2.7 2 1 0 2 2 2 2 E-set like domain AA_kinase PF00696.28 gi|21227713|ref|NP_633635.1| - 2.3e-24 86.3 0.7 7.4e-24 84.7 0.7 1.7 1 1 0 1 1 1 1 Amino acid kinase family VAPB_antitox PF02697.14 gi|21227714|ref|NP_633636.1| - 0.074 13.8 0.1 0.33 11.7 0.2 2.0 2 0 0 2 2 2 0 Putative antitoxin DUF3862 PF12978.7 gi|21227714|ref|NP_633636.1| - 0.12 12.1 0.0 6.4 6.6 0.0 2.3 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3862) DUF111 PF01969.17 gi|21227715|ref|NP_633637.1| - 3.1e-20 72.6 0.0 3.9e-20 72.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF111 RMMBL PF07521.12 gi|21227715|ref|NP_633637.1| - 0.079 12.9 0.0 1 9.4 0.0 2.3 2 0 0 2 2 2 0 Zn-dependent metallo-hydrolase RNA specificity domain DUF695 PF05117.12 gi|21227715|ref|NP_633637.1| - 0.12 12.5 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF695) TetR_N PF00440.23 gi|21227716|ref|NP_633638.1| - 8e-17 60.8 0.0 1.3e-16 60.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_10 PF16295.5 gi|21227716|ref|NP_633638.1| - 1.6e-09 38.2 0.0 2.1e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 gi|21227716|ref|NP_633638.1| - 0.091 12.9 0.0 0.35 11.0 0.0 1.9 2 1 1 3 3 3 0 Helix-turn-helix of insertion element transposase Aldo_ket_red PF00248.21 gi|21227717|ref|NP_633639.1| - 3.5e-39 134.8 0.0 1.1e-37 129.8 0.0 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|21227717|ref|NP_633639.1| - 2.4e-12 47.2 6.5 5.3e-12 46.1 6.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227717|ref|NP_633639.1| - 3.8e-09 36.6 6.5 7e-09 35.7 6.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21227717|ref|NP_633639.1| - 2.2e-05 24.5 5.2 0.0037 17.4 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21227717|ref|NP_633639.1| - 0.0001 22.7 6.2 0.00022 21.6 6.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21227717|ref|NP_633639.1| - 0.00026 21.2 2.8 0.11 12.7 0.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21227717|ref|NP_633639.1| - 0.00028 21.0 5.8 0.054 13.6 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21227717|ref|NP_633639.1| - 0.0023 17.7 10.2 0.0047 16.7 1.8 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21227717|ref|NP_633639.1| - 0.0031 18.4 4.6 0.094 13.7 0.3 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 gi|21227717|ref|NP_633639.1| - 0.0042 17.9 2.6 2.1 9.3 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|21227717|ref|NP_633639.1| - 0.0069 16.2 3.7 0.0092 15.7 0.2 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_6 PF12837.7 gi|21227717|ref|NP_633639.1| - 0.023 14.8 1.1 0.023 14.8 1.1 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain AP_endonuc_2 PF01261.24 gi|21227717|ref|NP_633639.1| - 0.095 12.1 0.3 3.7 6.9 0.3 3.3 3 1 0 3 3 3 0 Xylose isomerase-like TIM barrel Fer4_2 PF12797.7 gi|21227717|ref|NP_633639.1| - 1.3 9.2 14.7 0.61 10.3 2.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21227717|ref|NP_633639.1| - 2.3 8.9 14.2 27 5.4 14.3 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227717|ref|NP_633639.1| - 5.4 7.8 13.6 1.7 9.3 2.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain AIRC PF00731.20 gi|21227718|ref|NP_633640.1| - 3.1e-17 62.5 2.8 3.1e-17 62.5 2.8 1.7 2 0 0 2 2 2 1 AIR carboxylase RRF PF01765.19 gi|21227718|ref|NP_633640.1| - 0.026 14.5 0.0 0.048 13.6 0.0 1.4 1 0 0 1 1 1 0 Ribosome recycling factor PhnJ PF06007.11 gi|21227718|ref|NP_633640.1| - 0.16 11.0 0.1 0.38 9.7 0.1 1.6 1 1 0 1 1 1 0 Phosphonate metabolism protein PhnJ DUF111 PF01969.17 gi|21227719|ref|NP_633641.1| - 3.4e-121 404.8 0.1 3.9e-121 404.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 Semialdhyde_dhC PF02774.18 gi|21227720|ref|NP_633642.1| - 5.5e-37 127.6 0.0 9.1e-37 126.9 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|21227720|ref|NP_633642.1| - 1.3e-34 119.2 0.0 2.2e-34 118.5 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|21227720|ref|NP_633642.1| - 0.0012 19.7 0.0 0.002 19.0 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_10 PF13460.6 gi|21227720|ref|NP_633642.1| - 0.0014 18.5 0.1 0.0023 17.9 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding DXP_reductoisom PF02670.16 gi|21227720|ref|NP_633642.1| - 0.0026 18.5 0.0 0.0051 17.5 0.0 1.6 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase Sacchrp_dh_NADP PF03435.18 gi|21227720|ref|NP_633642.1| - 0.016 15.4 0.0 0.03 14.6 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 gi|21227720|ref|NP_633642.1| - 0.021 15.0 0.0 0.04 14.0 0.0 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Fer4 PF00037.27 gi|21227721|ref|NP_633643.1| - 5e-18 64.1 18.2 2.3e-09 36.7 5.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21227721|ref|NP_633643.1| - 1.1e-12 47.9 26.0 2e-09 37.4 14.1 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227721|ref|NP_633643.1| - 2.9e-12 46.5 12.5 3.4e-12 46.3 12.5 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227721|ref|NP_633643.1| - 1.4e-11 44.8 12.0 1.9e-11 44.4 12.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227721|ref|NP_633643.1| - 1e-10 41.0 15.0 1.8e-05 24.6 3.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21227721|ref|NP_633643.1| - 1.2e-10 41.0 18.2 5.6e-06 26.2 5.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21227721|ref|NP_633643.1| - 7.1e-10 39.7 12.6 5.1e-05 24.1 1.1 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|21227721|ref|NP_633643.1| - 2.1e-09 37.4 14.1 3.8e-09 36.5 14.1 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227721|ref|NP_633643.1| - 1.7e-08 34.3 14.8 0.00043 20.6 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21227721|ref|NP_633643.1| - 1e-07 32.4 12.7 0.00015 22.2 0.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21227721|ref|NP_633643.1| - 6.7e-07 29.8 14.2 0.003 18.1 4.5 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_11 PF13247.6 gi|21227721|ref|NP_633643.1| - 1.2e-06 28.6 6.3 1.2e-06 28.6 6.3 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21227721|ref|NP_633643.1| - 7.5e-06 26.3 14.6 0.0075 16.7 2.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21227721|ref|NP_633643.1| - 3.4e-05 24.6 8.0 0.041 14.7 0.8 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21227721|ref|NP_633643.1| - 3.6e-05 24.4 18.9 0.013 16.4 6.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|21227721|ref|NP_633643.1| - 0.00011 22.9 16.9 0.00089 19.9 3.1 2.8 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|21227721|ref|NP_633643.1| - 0.009 16.2 11.6 0.015 15.5 11.6 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|21227721|ref|NP_633643.1| - 0.25 11.5 7.4 0.62 10.2 1.0 2.0 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S HTH_45 PF14947.6 gi|21227722|ref|NP_633644.1| - 0.01 15.8 0.1 0.016 15.2 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix HemN_C PF06969.16 gi|21227722|ref|NP_633644.1| - 0.011 15.8 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 0 HemN C-terminal domain Scaffolding_pro PF11418.8 gi|21227722|ref|NP_633644.1| - 0.062 13.9 0.0 0.07 13.7 0.0 1.2 1 0 0 1 1 1 0 Phi29 scaffolding protein cobW PF02492.19 gi|21227723|ref|NP_633645.1| - 2.2e-38 131.6 0.1 2.9e-38 131.2 0.1 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|21227723|ref|NP_633645.1| - 0.00028 20.0 0.4 0.0025 16.9 0.4 2.2 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB GTP_EFTU PF00009.27 gi|21227723|ref|NP_633645.1| - 0.0056 16.2 0.3 3.5 7.1 0.0 3.1 3 0 0 3 3 3 1 Elongation factor Tu GTP binding domain Viral_helicase1 PF01443.18 gi|21227723|ref|NP_633645.1| - 0.0095 15.7 0.1 0.018 14.8 0.1 1.5 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase Zeta_toxin PF06414.12 gi|21227723|ref|NP_633645.1| - 0.022 14.0 0.0 0.05 12.9 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin ATP_bind_1 PF03029.17 gi|21227723|ref|NP_633645.1| - 0.03 14.1 0.1 0.4 10.4 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein SRP54 PF00448.22 gi|21227723|ref|NP_633645.1| - 0.039 13.6 0.1 0.073 12.7 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 gi|21227723|ref|NP_633645.1| - 0.041 13.8 0.9 0.15 12.0 0.2 2.3 2 1 0 2 2 2 0 NTPase TrwB_AAD_bind PF10412.9 gi|21227723|ref|NP_633645.1| - 0.046 12.6 0.3 0.084 11.8 0.3 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_30 PF13604.6 gi|21227723|ref|NP_633645.1| - 0.057 13.1 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|21227723|ref|NP_633645.1| - 0.086 13.1 0.0 0.18 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 gi|21227723|ref|NP_633645.1| - 0.091 12.5 2.1 3.6 7.3 0.1 2.7 3 0 0 3 3 3 0 AAA domain Thymidylate_kin PF02223.17 gi|21227723|ref|NP_633645.1| - 0.11 12.1 0.7 1 9.0 0.0 2.6 3 0 0 3 3 3 0 Thymidylate kinase LpxK PF02606.14 gi|21227723|ref|NP_633645.1| - 0.13 11.3 0.0 0.23 10.5 0.0 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase NACHT PF05729.12 gi|21227723|ref|NP_633645.1| - 0.26 11.2 1.3 0.79 9.6 0.2 2.1 2 0 0 2 2 2 0 NACHT domain HTH_45 PF14947.6 gi|21227724|ref|NP_633646.1| - 2.4e-05 24.2 0.1 3.9e-05 23.6 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix Mrr_N PF14338.6 gi|21227724|ref|NP_633646.1| - 0.031 14.4 0.0 0.047 13.8 0.0 1.4 1 1 0 1 1 1 0 Mrr N-terminal domain HTH_12 PF08461.10 gi|21227724|ref|NP_633646.1| - 0.031 14.2 0.1 0.064 13.2 0.1 1.5 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_5 PF01022.20 gi|21227724|ref|NP_633646.1| - 0.1 12.5 0.0 0.18 11.7 0.0 1.5 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family DASH_Spc19 PF08287.11 gi|21227725|ref|NP_633647.1| - 0.025 14.5 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Spc19 SlyX PF04102.12 gi|21227725|ref|NP_633647.1| - 0.036 14.7 0.1 0.054 14.1 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.11 gi|21227725|ref|NP_633647.1| - 0.22 11.3 0.4 0.22 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.14 gi|21227726|ref|NP_633648.1| - 2.5e-73 247.0 0.0 2.9e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21227726|ref|NP_633648.1| - 4.8e-10 39.7 6.7 1.3e-09 38.2 6.7 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21227726|ref|NP_633648.1| - 0.00015 22.0 1.1 0.62 10.3 0.0 3.0 2 1 1 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|21227726|ref|NP_633648.1| - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) zf-RING_5 PF14634.6 gi|21227726|ref|NP_633648.1| - 0.34 10.9 7.9 1 9.4 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21227726|ref|NP_633648.1| - 1.2 10.0 7.5 0.17 12.6 2.9 2.0 2 0 0 2 2 2 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|21227726|ref|NP_633648.1| - 1.3 9.7 5.2 31 5.3 0.5 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 MORN_2 PF07661.13 gi|21227727|ref|NP_633649.1| - 0.0088 16.2 0.4 5.9 7.4 0.0 3.2 2 1 1 3 3 3 2 MORN repeat variant Pput2613-deam PF14427.6 gi|21227727|ref|NP_633649.1| - 0.034 14.0 1.2 0.079 12.9 0.4 1.9 1 1 1 2 2 2 0 Pput_2613-like deaminase Radical_SAM PF04055.21 gi|21227728|ref|NP_633650.1| - 3.9e-09 37.1 0.2 6.9e-09 36.3 0.2 1.4 1 0 0 1 1 1 1 Radical SAM superfamily DeoC PF01791.9 gi|21227729|ref|NP_633651.1| - 8.4e-60 202.3 0.0 1e-59 202.0 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase OMPdecase PF00215.24 gi|21227729|ref|NP_633651.1| - 5.1e-06 26.2 0.0 7.5e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family ThiG PF05690.14 gi|21227729|ref|NP_633651.1| - 0.029 13.7 1.2 0.069 12.5 0.3 1.9 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG dUTPase PF00692.19 gi|21227730|ref|NP_633652.1| - 3.5e-11 42.9 0.0 5e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|21227730|ref|NP_633652.1| - 0.021 13.6 0.0 0.073 11.8 0.0 1.8 1 1 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DUF2341 PF10102.9 gi|21227731|ref|NP_633653.1| - 8.2e-26 90.4 0.0 2.6e-25 88.8 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF2341) Peripla_BP_6 PF13458.6 gi|21227731|ref|NP_633653.1| - 0.089 12.4 0.0 0.5 10.0 0.0 2.1 3 0 0 3 3 3 0 Periplasmic binding protein DUF4969 PF16339.5 gi|21227732|ref|NP_633654.1| - 0.026 14.9 0.9 0.3 11.4 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4969) PPP4R2 PF09184.11 gi|21227732|ref|NP_633654.1| - 3.5 7.1 8.4 4.3 6.8 8.4 1.1 1 0 0 1 1 1 0 PPP4R2 FMN_red PF03358.15 gi|21227733|ref|NP_633655.1| - 1.1e-27 96.7 0.0 1.4e-27 96.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21227733|ref|NP_633655.1| - 3.5e-20 72.6 0.0 4.3e-20 72.3 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|21227733|ref|NP_633655.1| - 0.00035 20.8 0.0 0.011 16.0 0.0 2.2 2 0 0 2 2 2 1 Flavodoxin domain Peptidase_Mx1 PF15890.5 gi|21227733|ref|NP_633655.1| - 0.12 11.8 0.0 0.17 11.3 0.0 1.2 1 0 0 1 1 1 0 Putative zinc-binding metallo-peptidase FMN_red PF03358.15 gi|21227734|ref|NP_633656.1| - 4.2e-27 94.8 0.0 5.1e-27 94.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21227734|ref|NP_633656.1| - 9.3e-20 71.2 0.0 1.1e-19 71.0 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|21227734|ref|NP_633656.1| - 0.022 15.0 0.0 0.23 11.7 0.0 2.0 2 0 0 2 2 2 0 Flavodoxin domain Glyco_trans_4_5 PF16994.5 gi|21227734|ref|NP_633656.1| - 0.16 11.6 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl-transferase family 4 MacB_PCD PF12704.7 gi|21227735|ref|NP_633657.1| - 6e-26 92.0 4.0 1.2e-25 91.0 4.0 1.5 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|21227735|ref|NP_633657.1| - 1.5e-11 44.6 6.3 1.5e-11 44.6 6.3 3.1 3 0 0 3 3 3 1 FtsX-like permease family SelR PF01641.18 gi|21227736|ref|NP_633658.1| - 4.2e-56 188.2 0.2 4.9e-56 188.0 0.2 1.0 1 0 0 1 1 1 1 SelR domain TF_Zn_Ribbon PF08271.12 gi|21227736|ref|NP_633658.1| - 0.00085 18.8 0.3 1.5 8.4 0.0 2.6 2 0 0 2 2 2 2 TFIIB zinc-binding zinc_ribbon_10 PF10058.9 gi|21227736|ref|NP_633658.1| - 0.0011 18.7 1.2 0.043 13.5 0.1 2.2 2 0 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein ADD_ATRX PF17981.1 gi|21227736|ref|NP_633658.1| - 0.0062 16.4 0.1 1.3 9.0 0.0 2.3 2 0 0 2 2 2 1 Cysteine Rich ADD domain Yippee-Mis18 PF03226.14 gi|21227736|ref|NP_633658.1| - 0.0096 16.1 0.3 0.027 14.7 0.3 1.7 1 1 1 2 2 2 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF2318 PF10080.9 gi|21227736|ref|NP_633658.1| - 0.017 15.2 0.9 4.9 7.3 0.1 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) zf_UBZ PF18439.1 gi|21227736|ref|NP_633658.1| - 0.017 14.7 0.5 5.1 6.8 0.1 2.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 gi|21227736|ref|NP_633658.1| - 0.03 13.7 0.7 3.3 7.2 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain HNH_5 PF14279.6 gi|21227736|ref|NP_633658.1| - 0.033 14.0 0.3 0.7 9.8 0.0 2.2 2 0 0 2 2 2 0 HNH endonuclease C1_2 PF03107.16 gi|21227736|ref|NP_633658.1| - 0.055 13.8 0.2 0.83 10.0 0.0 2.2 2 0 0 2 2 2 0 C1 domain HECT_2 PF09814.9 gi|21227736|ref|NP_633658.1| - 0.067 12.0 0.2 0.35 9.7 0.3 1.8 1 1 1 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding GFA PF04828.14 gi|21227736|ref|NP_633658.1| - 0.07 13.5 1.0 7.1 7.0 0.1 2.2 1 1 0 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_2 PF13240.6 gi|21227736|ref|NP_633658.1| - 0.077 12.7 1.0 6.5 6.6 0.0 2.8 3 0 0 3 3 3 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|21227736|ref|NP_633658.1| - 0.078 12.7 2.4 0.8 9.5 0.3 2.4 2 0 0 2 2 2 0 A2L zinc ribbon domain DZR PF12773.7 gi|21227736|ref|NP_633658.1| - 0.082 12.9 0.7 0.46 10.5 0.7 2.1 1 1 0 1 1 1 0 Double zinc ribbon DUF678 PF05077.12 gi|21227736|ref|NP_633658.1| - 0.1 12.8 0.1 16 5.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF678) HAD_2 PF13419.6 gi|21227737|ref|NP_633659.1| - 3.1e-34 118.6 0.0 3.7e-34 118.3 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|21227737|ref|NP_633659.1| - 1.4e-18 68.0 0.0 6.4e-17 62.5 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|21227737|ref|NP_633659.1| - 3.7e-05 24.2 0.0 4.8e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|21227737|ref|NP_633659.1| - 0.00013 21.9 0.0 0.00039 20.4 0.0 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like NIF PF03031.18 gi|21227737|ref|NP_633659.1| - 0.0081 15.9 0.0 0.075 12.8 0.0 2.4 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase NT5C PF06941.12 gi|21227737|ref|NP_633659.1| - 0.011 15.6 0.1 0.046 13.6 0.1 1.9 1 1 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Hydrolase_6 PF13344.6 gi|21227737|ref|NP_633659.1| - 0.1 12.7 0.0 1.5 9.0 0.0 2.7 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Glyco_trans_1_3 PF13528.6 gi|21227738|ref|NP_633660.1| - 4.9e-20 72.0 0.0 1e-10 41.4 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.16 gi|21227738|ref|NP_633660.1| - 1.9e-13 50.8 0.0 3e-13 50.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_4 PF13439.6 gi|21227738|ref|NP_633660.1| - 1.2e-06 28.7 0.0 3.1e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 UDPGT PF00201.18 gi|21227738|ref|NP_633660.1| - 3.8e-06 26.0 0.0 0.00034 19.5 0.0 2.0 2 0 0 2 2 2 2 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_transf_28 PF03033.20 gi|21227738|ref|NP_633660.1| - 4.9e-06 26.6 0.0 2.1e-05 24.6 0.0 2.1 2 1 1 3 3 3 1 Glycosyltransferase family 28 N-terminal domain Glyco_trans_4_2 PF13477.6 gi|21227738|ref|NP_633660.1| - 1.7e-05 24.9 0.0 2.9e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_4 PF13692.6 gi|21227738|ref|NP_633660.1| - 0.00078 19.9 0.0 0.0016 18.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21227738|ref|NP_633660.1| - 0.0011 19.5 0.0 0.0017 18.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|21227738|ref|NP_633660.1| - 0.0019 17.8 0.0 0.0035 16.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 YdjM PF04307.14 gi|21227739|ref|NP_633661.1| - 2.1e-08 33.7 6.2 4.1e-08 32.7 6.2 1.4 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase CPP1-like PF11833.8 gi|21227739|ref|NP_633661.1| - 1.6 8.4 6.2 8.8 5.9 0.4 2.3 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Glycos_transf_2 PF00535.26 gi|21227740|ref|NP_633662.1| - 9.3e-25 87.4 0.0 1.4e-24 86.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227740|ref|NP_633662.1| - 9.6e-06 25.6 0.0 1.1e-05 25.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|21227740|ref|NP_633662.1| - 0.00013 22.4 0.0 0.00027 21.4 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|21227740|ref|NP_633662.1| - 0.0046 16.5 0.0 0.0072 15.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|21227740|ref|NP_633662.1| - 0.03 13.8 0.0 0.047 13.2 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 21 RseC_MucC PF04246.12 gi|21227740|ref|NP_633662.1| - 0.049 13.6 1.2 0.087 12.8 1.2 1.4 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC PGM_PMM_II PF02879.16 gi|21227740|ref|NP_633662.1| - 0.12 13.1 0.0 0.32 11.6 0.0 1.8 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Hexapep PF00132.24 gi|21227741|ref|NP_633663.1| - 1.1e-09 37.6 7.3 2e-07 30.4 0.5 3.6 4 0 0 4 4 4 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21227741|ref|NP_633663.1| - 8.8e-06 25.4 5.3 0.0053 16.5 1.0 3.0 2 2 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase DUF3473 PF11959.8 gi|21227742|ref|NP_633664.1| - 2.9e-33 114.7 0.1 4.4e-33 114.1 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) Polysacc_deac_1 PF01522.21 gi|21227742|ref|NP_633664.1| - 2.1e-25 89.0 0.0 3.7e-25 88.2 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 gi|21227742|ref|NP_633664.1| - 3e-06 26.7 0.1 5e-06 25.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 DUF2334 PF10096.9 gi|21227742|ref|NP_633664.1| - 0.00055 19.6 0.1 0.0014 18.3 0.1 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Glycos_transf_1 PF00534.20 gi|21227743|ref|NP_633665.1| - 1.9e-28 99.2 0.2 2.8e-28 98.6 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21227743|ref|NP_633665.1| - 2.9e-22 79.5 0.0 1e-21 77.8 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21227743|ref|NP_633665.1| - 1.2e-09 38.4 0.0 1.9e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|21227743|ref|NP_633665.1| - 0.00061 20.1 0.0 0.0015 18.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21227743|ref|NP_633665.1| - 0.013 15.9 0.0 0.022 15.2 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|21227743|ref|NP_633665.1| - 0.025 14.6 0.1 0.056 13.5 0.1 1.6 1 0 0 1 1 1 0 Glycosyl transferase 4-like DUF2206 PF09971.9 gi|21227744|ref|NP_633666.1| - 1.2e-42 146.0 38.2 1.2e-42 146.0 38.2 4.3 2 2 1 3 3 3 1 Predicted membrane protein (DUF2206) DUF1616 PF07760.11 gi|21227744|ref|NP_633666.1| - 0.0006 19.3 8.1 0.0006 19.3 8.1 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1616) Polysacc_synt PF01943.17 gi|21227745|ref|NP_633667.1| - 8.5e-09 35.2 36.8 8.5e-09 35.2 36.8 2.9 1 1 2 3 3 3 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|21227745|ref|NP_633667.1| - 1.6e-07 31.5 10.7 1.6e-07 31.5 10.7 4.7 2 1 3 6 6 6 1 Polysaccharide biosynthesis C-terminal domain Methyltransf_11 PF08241.12 gi|21227746|ref|NP_633668.1| - 3.6e-21 75.6 0.0 6.4e-21 74.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21227746|ref|NP_633668.1| - 6.1e-14 52.5 0.0 1.1e-13 51.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21227746|ref|NP_633668.1| - 2.4e-13 50.3 0.0 3.5e-13 49.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227746|ref|NP_633668.1| - 2.8e-12 46.7 0.2 7.1e-12 45.4 0.0 1.7 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21227746|ref|NP_633668.1| - 9.6e-11 42.3 0.0 2.6e-10 40.9 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain DREV PF05219.12 gi|21227746|ref|NP_633668.1| - 3e-06 26.5 0.0 4.1e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase MetW PF07021.12 gi|21227746|ref|NP_633668.1| - 1.5e-05 24.7 0.0 2.4e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_29 PF03141.16 gi|21227746|ref|NP_633668.1| - 0.00013 20.7 0.2 0.00025 19.8 0.1 1.6 1 1 1 2 2 2 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Ubie_methyltran PF01209.18 gi|21227746|ref|NP_633668.1| - 0.00013 21.4 0.0 0.00018 20.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|21227746|ref|NP_633668.1| - 0.08 12.5 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain UPF0146 PF03686.13 gi|21227746|ref|NP_633668.1| - 0.084 12.7 0.1 0.77 9.6 0.0 2.4 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0146) NodS PF05401.11 gi|21227746|ref|NP_633668.1| - 0.096 12.3 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) DUF362 PF04015.12 gi|21227747|ref|NP_633669.1| - 5.6e-21 75.7 0.0 7.7e-21 75.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF362) MtaB PF12176.8 gi|21227749|ref|NP_633671.1| - 2.5e-233 774.9 4.2 2.9e-233 774.7 4.2 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit B12-binding PF02310.19 gi|21227750|ref|NP_633672.1| - 8.6e-18 64.5 0.2 1.4e-17 63.8 0.2 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|21227750|ref|NP_633672.1| - 3e-14 53.2 0.7 1.2e-13 51.2 0.1 2.3 2 1 0 2 2 2 1 B12 binding domain Ocnus PF05005.15 gi|21227750|ref|NP_633672.1| - 0.16 12.1 0.0 0.29 11.3 0.0 1.3 1 0 0 1 1 1 0 Janus/Ocnus family (Ocnus) DUF1724 PF08350.10 gi|21227751|ref|NP_633673.1| - 5.9e-19 68.0 0.1 1.5e-18 66.6 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_45 PF14947.6 gi|21227751|ref|NP_633673.1| - 0.0028 17.6 0.0 0.007 16.3 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1724 PF08350.10 gi|21227752|ref|NP_633674.1| - 5.2e-23 81.0 0.8 9.7e-23 80.1 0.8 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21227752|ref|NP_633674.1| - 4.1e-05 23.4 0.4 7.2e-05 22.6 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|21227752|ref|NP_633674.1| - 0.0056 16.5 0.1 0.011 15.6 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|21227752|ref|NP_633674.1| - 0.012 16.1 0.0 0.022 15.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|21227752|ref|NP_633674.1| - 0.021 14.4 0.3 0.043 13.4 0.3 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|21227752|ref|NP_633674.1| - 0.023 14.6 0.2 0.04 13.9 0.2 1.4 1 0 0 1 1 1 0 HTH domain HTH_20 PF12840.7 gi|21227752|ref|NP_633674.1| - 0.06 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|21227752|ref|NP_633674.1| - 0.067 13.2 0.1 0.14 12.2 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix MarR PF01047.22 gi|21227752|ref|NP_633674.1| - 0.13 12.2 0.1 0.31 11.0 0.1 1.6 1 0 0 1 1 1 0 MarR family UDG PF03167.19 gi|21227753|ref|NP_633675.1| - 2.1e-11 44.0 0.0 2.6e-11 43.8 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Fer4 PF00037.27 gi|21227754|ref|NP_633676.1| - 3.4e-18 64.6 23.5 3.6e-09 36.1 6.1 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21227754|ref|NP_633676.1| - 4.6e-11 42.3 22.3 1.7e-05 24.7 4.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21227754|ref|NP_633676.1| - 2.2e-10 40.5 19.0 8.2e-10 38.7 18.9 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227754|ref|NP_633676.1| - 2.3e-10 40.4 14.4 2.8e-10 40.2 14.4 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227754|ref|NP_633676.1| - 6.2e-10 39.5 15.8 1.2e-09 38.6 15.8 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227754|ref|NP_633676.1| - 1.9e-09 37.1 20.1 2.6e-05 24.0 3.4 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21227754|ref|NP_633676.1| - 2e-09 37.4 29.8 5.1e-07 29.7 17.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227754|ref|NP_633676.1| - 3.5e-09 36.5 15.6 5.6e-05 23.3 2.2 2.3 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21227754|ref|NP_633676.1| - 2.4e-08 34.8 14.0 0.00058 20.7 3.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|21227754|ref|NP_633676.1| - 1.9e-05 25.0 15.9 0.017 15.6 3.9 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21227754|ref|NP_633676.1| - 2.3e-05 25.0 22.1 0.0042 17.9 4.7 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|21227754|ref|NP_633676.1| - 3e-05 24.5 20.1 0.012 16.1 4.9 2.8 2 1 1 3 3 3 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|21227754|ref|NP_633676.1| - 3.4e-05 24.3 14.1 0.0076 16.8 2.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|21227754|ref|NP_633676.1| - 0.00011 22.2 8.2 0.00011 22.2 8.2 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21227754|ref|NP_633676.1| - 0.00014 22.6 12.7 0.0082 17.0 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21227754|ref|NP_633676.1| - 0.0041 17.3 17.0 0.14 12.4 5.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21227754|ref|NP_633676.1| - 0.12 13.1 25.0 0.12 13.2 8.2 3.4 1 1 1 2 2 2 0 4Fe-4S single cluster domain Glycos_transf_2 PF00535.26 gi|21227756|ref|NP_633678.1| - 1.3e-33 116.2 0.0 3.3e-33 114.9 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21227756|ref|NP_633678.1| - 1.7e-24 87.0 0.0 2.7e-24 86.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|21227756|ref|NP_633678.1| - 8.9e-21 74.7 0.1 1.8e-20 73.7 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family group 2 DUF2334 PF10096.9 gi|21227756|ref|NP_633678.1| - 6.7e-13 48.8 0.0 3.7e-09 36.5 0.0 2.6 2 0 0 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2334) Glyco_tranf_2_2 PF10111.9 gi|21227756|ref|NP_633678.1| - 6.9e-08 32.3 0.1 1.2e-07 31.6 0.1 1.5 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|21227756|ref|NP_633678.1| - 4e-07 29.7 0.0 7.8e-07 28.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Polysacc_deac_1 PF01522.21 gi|21227756|ref|NP_633678.1| - 0.00063 19.6 0.0 0.0026 17.7 0.0 2.1 3 0 0 3 3 3 1 Polysaccharide deacetylase Glyco_tranf_2_4 PF13704.6 gi|21227756|ref|NP_633678.1| - 0.0012 19.3 0.0 0.0051 17.3 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase family 2 DUF2207 PF09972.9 gi|21227756|ref|NP_633678.1| - 0.84 8.3 4.4 3.2 6.4 2.7 2.5 3 0 0 3 3 3 0 Predicted membrane protein (DUF2207) SWIM PF04434.17 gi|21227757|ref|NP_633679.1| - 0.0056 16.3 0.4 0.011 15.4 0.4 1.4 1 0 0 1 1 1 1 SWIM zinc finger FANCI_S1-cap PF14674.6 gi|21227757|ref|NP_633679.1| - 0.0095 16.0 0.1 0.051 13.7 0.1 2.3 1 0 0 1 1 1 1 FANCI solenoid 1 cap PUA PF01472.20 gi|21227757|ref|NP_633679.1| - 0.035 14.1 0.1 0.096 12.7 0.1 1.7 1 0 0 1 1 1 0 PUA domain 4HB_MCP_1 PF12729.7 gi|21227757|ref|NP_633679.1| - 0.25 10.9 6.1 0.21 11.1 3.2 2.4 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction DAO PF01266.24 gi|21227758|ref|NP_633680.1| - 1.5e-43 149.7 0.0 1.9e-43 149.4 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Rieske PF00355.26 gi|21227758|ref|NP_633680.1| - 1.9e-13 50.2 0.1 4.7e-13 48.9 0.1 1.6 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain NAD_binding_8 PF13450.6 gi|21227758|ref|NP_633680.1| - 9.7e-07 28.9 0.6 2.7e-06 27.5 0.6 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|21227758|ref|NP_633680.1| - 3.1e-06 26.7 2.1 0.001 18.4 0.6 2.5 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|21227758|ref|NP_633680.1| - 0.00017 20.8 3.0 0.00027 20.1 2.9 1.5 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|21227758|ref|NP_633680.1| - 0.00043 19.6 0.3 0.0082 15.4 0.1 2.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|21227758|ref|NP_633680.1| - 0.00078 18.8 0.0 0.0012 18.2 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|21227758|ref|NP_633680.1| - 0.00093 18.0 0.1 0.045 12.5 0.1 2.1 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|21227758|ref|NP_633680.1| - 0.0056 16.0 0.1 0.0093 15.2 0.1 1.3 1 0 0 1 1 1 1 Thi4 family Trp_halogenase PF04820.14 gi|21227758|ref|NP_633680.1| - 0.0074 15.2 0.5 0.011 14.6 0.5 1.3 1 0 0 1 1 1 1 Tryptophan halogenase Pyr_redox PF00070.27 gi|21227758|ref|NP_633680.1| - 0.0078 16.8 0.5 0.077 13.6 0.3 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|21227758|ref|NP_633680.1| - 0.075 12.3 0.1 2.3 7.4 0.2 2.2 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|21227758|ref|NP_633680.1| - 0.18 10.8 0.0 0.55 9.2 0.0 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein AAA_33 PF13671.6 gi|21227759|ref|NP_633681.1| - 2.3e-13 50.5 0.0 7.3e-13 48.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain Metallophos PF00149.28 gi|21227759|ref|NP_633681.1| - 7.3e-08 33.1 0.1 1.1e-07 32.6 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase KTI12 PF08433.10 gi|21227759|ref|NP_633681.1| - 0.0014 18.1 0.0 0.0027 17.2 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 PCC_BT PF18140.1 gi|21227759|ref|NP_633681.1| - 0.073 13.4 0.0 0.31 11.4 0.0 2.0 2 0 0 2 2 2 0 Propionyl-coenzyme A carboxylase BT domain MCPsignal PF00015.21 gi|21227760|ref|NP_633682.1| - 7.3e-40 136.6 43.9 1.2e-38 132.6 19.0 4.2 2 1 2 4 4 4 3 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_3 PF08447.12 gi|21227760|ref|NP_633682.1| - 9.7e-19 67.5 0.0 5.5e-18 65.1 0.0 2.4 2 0 0 2 2 1 1 PAS fold PAS_9 PF13426.7 gi|21227760|ref|NP_633682.1| - 1.5e-16 60.5 0.0 1e-06 28.9 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|21227760|ref|NP_633682.1| - 1.4e-14 54.3 0.0 3.1e-08 33.8 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 gi|21227760|ref|NP_633682.1| - 5.3e-13 48.9 0.0 2.4e-07 30.7 0.0 2.7 2 0 0 2 2 2 2 PAS fold DUF948 PF06103.11 gi|21227760|ref|NP_633682.1| - 4.9e-06 26.7 30.4 0.027 14.7 1.9 5.3 3 2 2 5 5 5 3 Bacterial protein of unknown function (DUF948) HAMP PF00672.25 gi|21227760|ref|NP_633682.1| - 0.0029 17.9 0.7 2.4 8.6 0.0 4.6 5 0 0 5 5 4 1 HAMP domain PAS_10 PF13596.6 gi|21227760|ref|NP_633682.1| - 0.021 15.4 0.6 1.3 9.7 0.0 3.4 3 0 0 3 3 3 0 PAS domain ENTH PF01417.20 gi|21227760|ref|NP_633682.1| - 0.035 14.1 0.0 0.67 10.0 0.0 2.8 2 2 0 2 2 2 0 ENTH domain Sigma70_ner PF04546.13 gi|21227760|ref|NP_633682.1| - 0.056 13.3 18.9 1 9.2 8.9 3.0 2 2 1 3 3 3 0 Sigma-70, non-essential region DUF1776 PF08643.10 gi|21227760|ref|NP_633682.1| - 0.056 12.8 0.4 0.12 11.7 0.4 1.5 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) PAS_8 PF13188.7 gi|21227760|ref|NP_633682.1| - 0.057 13.5 0.0 1.8 8.7 0.0 2.6 2 0 0 2 2 2 0 PAS domain Vps53_N PF04100.12 gi|21227760|ref|NP_633682.1| - 0.11 11.5 27.9 0.81 8.6 6.0 3.9 4 1 1 5 5 5 0 Vps53-like, N-terminal Abi_C PF14355.6 gi|21227760|ref|NP_633682.1| - 0.21 11.7 8.1 1.1 9.4 0.3 4.7 4 1 1 5 5 5 0 Abortive infection C-terminus Spike_torovirin PF17072.5 gi|21227760|ref|NP_633682.1| - 0.24 8.5 1.6 0.32 8.1 1.6 1.1 1 0 0 1 1 1 0 Torovirinae spike glycoprotein BSP PF04450.12 gi|21227760|ref|NP_633682.1| - 0.28 10.9 4.7 2.4 7.9 0.1 2.6 2 0 0 2 2 2 0 Peptidase of plants and bacteria DUF1664 PF07889.12 gi|21227760|ref|NP_633682.1| - 0.49 10.4 27.3 0.92 9.6 0.1 5.1 2 2 2 5 5 5 0 Protein of unknown function (DUF1664) Imm7 PF15585.6 gi|21227760|ref|NP_633682.1| - 1.1 9.5 5.6 7.2 6.9 0.9 3.6 2 2 1 3 3 3 0 Immunity protein 7 Laminin_II PF06009.12 gi|21227760|ref|NP_633682.1| - 1.2 9.2 32.8 0.49 10.4 4.1 4.7 2 2 2 4 4 4 0 Laminin Domain II FUSC PF04632.12 gi|21227760|ref|NP_633682.1| - 2.4 6.6 6.3 0.89 8.0 0.9 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein family Prominin PF05478.11 gi|21227760|ref|NP_633682.1| - 2.7 5.9 20.3 0.31 8.9 5.4 2.2 2 0 0 2 2 2 0 Prominin CorA PF01544.18 gi|21227760|ref|NP_633682.1| - 2.9 7.1 12.6 2.4 7.4 0.2 3.5 2 1 1 3 3 3 0 CorA-like Mg2+ transporter protein Spc7 PF08317.11 gi|21227760|ref|NP_633682.1| - 2.9 6.7 26.1 0.59 9.0 4.5 2.6 1 1 1 3 3 3 0 Spc7 kinetochore protein Ufd2P_core PF10408.9 gi|21227760|ref|NP_633682.1| - 4.5 5.7 13.7 1.6 7.2 2.9 2.5 2 1 0 2 2 2 0 Ubiquitin elongating factor core DUF489 PF04356.12 gi|21227760|ref|NP_633682.1| - 9.3 6.2 11.3 1.2 9.1 3.6 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF489) MgtE PF01769.16 gi|21227762|ref|NP_633684.1| - 6.8e-26 91.1 7.6 6.8e-26 91.1 7.6 1.7 2 0 0 2 2 2 1 Divalent cation transporter MgtE_N PF03448.17 gi|21227762|ref|NP_633684.1| - 3.8e-23 82.0 1.2 1.6e-22 80.0 0.3 2.2 2 0 0 2 2 2 1 MgtE intracellular N domain CBS PF00571.28 gi|21227762|ref|NP_633684.1| - 8.8e-05 22.9 0.1 0.086 13.3 0.2 2.8 2 0 0 2 2 2 2 CBS domain IncE PF17627.2 gi|21227762|ref|NP_633684.1| - 0.38 10.8 3.2 0.73 9.9 3.2 1.4 1 0 0 1 1 1 0 Inclusion membrane protein E EcoEI_R_C PF08463.10 gi|21227763|ref|NP_633685.1| - 7.2e-49 166.1 0.9 7.2e-49 166.1 0.9 2.9 3 0 0 3 3 3 1 EcoEI R protein C-terminal ResIII PF04851.15 gi|21227763|ref|NP_633685.1| - 2.6e-42 144.8 0.0 9.5e-42 142.9 0.0 2.0 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 gi|21227763|ref|NP_633685.1| - 2.9e-19 69.6 0.7 9.2e-19 68.0 0.0 2.1 2 0 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|21227763|ref|NP_633685.1| - 6.5e-09 36.0 3.6 2.2e-06 27.7 0.1 3.8 2 2 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.29 gi|21227763|ref|NP_633685.1| - 9.7e-09 35.2 0.0 3.4e-08 33.5 0.0 2.0 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|21227763|ref|NP_633685.1| - 6.8e-05 23.2 0.0 0.0018 18.6 0.0 2.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Zot PF05707.12 gi|21227763|ref|NP_633685.1| - 0.028 14.0 1.5 23 4.6 0.0 3.3 3 0 0 3 3 3 0 Zonular occludens toxin (Zot) DUF4854 PF16146.5 gi|21227763|ref|NP_633685.1| - 0.058 13.7 0.1 0.19 12.1 0.1 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4854) HTH_24 PF13412.6 gi|21227764|ref|NP_633686.1| - 1.4e-08 34.1 0.9 1.9e-08 33.8 0.9 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|21227764|ref|NP_633686.1| - 1.4e-06 28.2 0.1 1.7e-06 27.9 0.1 1.2 1 0 0 1 1 1 1 HTH domain HTH_DeoR PF08220.12 gi|21227764|ref|NP_633686.1| - 0.00032 20.4 0.0 0.0004 20.1 0.0 1.1 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|21227764|ref|NP_633686.1| - 0.0013 18.5 0.0 0.0018 18.0 0.0 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR PF01047.22 gi|21227764|ref|NP_633686.1| - 0.0015 18.4 0.0 0.0021 17.9 0.0 1.1 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|21227764|ref|NP_633686.1| - 0.0026 17.6 0.0 0.0033 17.3 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_Mga PF08280.11 gi|21227764|ref|NP_633686.1| - 0.0051 16.8 0.1 0.0073 16.3 0.1 1.1 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain Mga PF05043.13 gi|21227764|ref|NP_633686.1| - 0.0068 17.0 0.0 0.0089 16.6 0.0 1.2 1 0 0 1 1 1 1 Mga helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|21227764|ref|NP_633686.1| - 0.012 15.4 0.1 0.016 15.0 0.1 1.2 1 0 0 1 1 1 0 LexA DNA binding domain Rrf2 PF02082.20 gi|21227764|ref|NP_633686.1| - 0.014 15.8 0.0 0.017 15.4 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator DUF746 PF05344.11 gi|21227764|ref|NP_633686.1| - 0.064 13.1 0.0 0.094 12.6 0.0 1.4 1 1 0 1 1 1 0 Domain of Unknown Function (DUF746) HTH_10 PF04967.12 gi|21227764|ref|NP_633686.1| - 0.075 12.9 0.2 0.14 12.0 0.0 1.5 2 0 0 2 2 2 0 HTH DNA binding domain DDRGK PF09756.9 gi|21227764|ref|NP_633686.1| - 0.077 12.6 0.1 0.091 12.3 0.1 1.1 1 0 0 1 1 1 0 DDRGK domain FeoC PF09012.10 gi|21227764|ref|NP_633686.1| - 0.082 13.0 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_23 PF13384.6 gi|21227764|ref|NP_633686.1| - 0.084 12.7 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.6 gi|21227764|ref|NP_633686.1| - 0.1 12.7 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Crp_2 PF13545.6 gi|21227764|ref|NP_633686.1| - 0.11 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_26 PF13443.6 gi|21227764|ref|NP_633686.1| - 0.16 12.4 0.0 0.22 12.0 0.0 1.2 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain MDH PF02315.16 gi|21227765|ref|NP_633687.1| - 0.15 12.2 0.3 4.4 7.4 0.0 2.6 2 0 0 2 2 2 0 Methanol dehydrogenase beta subunit DUF3368 PF11848.8 gi|21227766|ref|NP_633688.1| - 0.0036 17.0 0.0 0.0095 15.7 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF3368) UPF0175 PF03683.13 gi|21227767|ref|NP_633689.1| - 1.9e-05 24.2 0.2 6.9e-05 22.5 0.0 2.0 2 1 1 3 3 3 1 Uncharacterised protein family (UPF0175) DUF4393 PF14337.6 gi|21227767|ref|NP_633689.1| - 0.00048 20.0 1.8 0.0089 15.9 1.9 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4393) DUF1495 PF07381.11 gi|21227767|ref|NP_633689.1| - 0.0027 17.5 1.2 0.033 14.0 0.0 2.6 2 1 0 2 2 2 1 Winged helix DNA-binding domain (DUF1495) DUF4364 PF14277.6 gi|21227767|ref|NP_633689.1| - 0.0068 16.2 0.3 0.014 15.1 0.1 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_45 PF14947.6 gi|21227767|ref|NP_633689.1| - 0.0091 16.0 0.2 0.054 13.5 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix Mrr_N PF14338.6 gi|21227767|ref|NP_633689.1| - 0.064 13.4 0.0 0.49 10.6 0.0 2.1 2 0 0 2 2 2 0 Mrr N-terminal domain DUF2250 PF10007.9 gi|21227767|ref|NP_633689.1| - 0.081 13.0 0.0 0.23 11.6 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) SIS PF01380.22 gi|21227767|ref|NP_633689.1| - 0.11 12.4 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 SIS domain SMC_N PF02463.19 gi|21227768|ref|NP_633690.1| - 1.5e-05 24.6 9.7 0.021 14.3 2.9 2.8 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|21227768|ref|NP_633690.1| - 0.0004 20.1 0.1 0.0011 18.7 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain PMBR PF09373.10 gi|21227768|ref|NP_633690.1| - 0.002 18.2 1.2 0.11 12.7 0.0 3.3 3 0 0 3 3 3 1 Pseudomurein-binding repeat AAA_16 PF13191.6 gi|21227768|ref|NP_633690.1| - 0.0096 16.3 0.0 0.031 14.7 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|21227768|ref|NP_633690.1| - 0.042 14.3 2.1 1.9 8.9 0.0 4.2 4 1 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) Ploopntkinase3 PF18751.1 gi|21227768|ref|NP_633690.1| - 0.084 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_33 PF13671.6 gi|21227768|ref|NP_633690.1| - 0.17 12.0 0.0 0.66 10.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|21227768|ref|NP_633690.1| - 0.2 11.4 0.0 0.38 10.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain Laminin_II PF06009.12 gi|21227768|ref|NP_633690.1| - 0.46 10.5 7.2 1 9.4 0.7 2.6 1 1 1 2 2 2 0 Laminin Domain II AAA_14 PF13173.6 gi|21227768|ref|NP_633690.1| - 5.7 7.0 10.3 0.26 11.3 1.8 3.3 3 1 0 3 3 3 0 AAA domain Methylase_S PF01420.19 gi|21227769|ref|NP_633691.1| - 4.4e-31 108.4 4.0 5.3e-17 62.5 0.2 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain DUF501 PF04417.12 gi|21227769|ref|NP_633691.1| - 0.091 12.6 2.5 1.5 8.6 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF501) AlbA_2 PF04326.14 gi|21227770|ref|NP_633692.1| - 4.9e-14 52.7 0.0 1.2e-13 51.5 0.0 1.6 1 0 0 1 1 1 1 Putative DNA-binding domain HATPase_c_4 PF13749.6 gi|21227770|ref|NP_633692.1| - 0.00076 19.6 0.0 0.0023 18.0 0.0 1.8 1 0 0 1 1 1 1 Putative ATP-dependent DNA helicase recG C-terminal HTH_5 PF01022.20 gi|21227770|ref|NP_633692.1| - 0.0042 16.9 0.0 0.009 15.9 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family N6_Mtase PF02384.16 gi|21227771|ref|NP_633693.1| - 7.6e-70 235.6 0.0 1.1e-69 235.1 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|21227771|ref|NP_633693.1| - 2.1e-14 54.3 0.1 1.7e-13 51.4 0.0 2.5 2 1 0 2 2 2 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|21227771|ref|NP_633693.1| - 7.6e-05 22.5 0.1 0.0014 18.3 0.1 2.7 2 1 0 2 2 2 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|21227771|ref|NP_633693.1| - 0.013 15.0 0.0 0.46 10.0 0.0 2.6 2 1 1 3 3 3 0 Methyltransferase small domain PocR PF10114.9 gi|21227773|ref|NP_633695.1| - 4.8e-46 156.5 0.0 1.6e-45 154.8 0.0 2.0 2 0 0 2 2 2 1 Sensory domain found in PocR HisKA_2 PF07568.12 gi|21227773|ref|NP_633695.1| - 1.1e-31 108.8 1.3 1.1e-31 108.8 1.3 2.3 2 0 0 2 2 2 1 Histidine kinase PAS_3 PF08447.12 gi|21227773|ref|NP_633695.1| - 3.2e-30 104.3 2.9 1.1e-15 57.6 0.1 3.9 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.7 gi|21227773|ref|NP_633695.1| - 1.7e-19 70.0 1.3 9.2e-15 54.8 0.0 4.0 3 1 1 4 4 4 2 PAS domain PAS PF00989.25 gi|21227773|ref|NP_633695.1| - 8.6e-19 67.6 0.0 1e-14 54.5 0.0 3.4 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.10 gi|21227773|ref|NP_633695.1| - 1.4e-17 63.9 0.0 4.2e-12 46.3 0.0 3.4 3 0 0 3 3 3 2 PAS fold HATPase_c PF02518.26 gi|21227773|ref|NP_633695.1| - 3.1e-10 40.5 0.0 8.9e-10 39.1 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|21227773|ref|NP_633695.1| - 4.1e-07 29.9 0.0 1.1e-06 28.5 0.0 1.8 1 0 0 1 1 1 1 PAS domain HWE_HK PF07536.14 gi|21227773|ref|NP_633695.1| - 0.0012 19.5 0.2 0.0043 17.7 0.2 1.9 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|21227773|ref|NP_633695.1| - 0.046 13.7 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Pro_Al_protease PF02983.14 gi|21227773|ref|NP_633695.1| - 0.17 12.0 2.9 0.2 11.7 0.0 2.5 3 0 0 3 3 3 0 Alpha-lytic protease prodomain DUF2564 PF10819.8 gi|21227773|ref|NP_633695.1| - 0.18 12.2 1.6 0.82 10.1 1.6 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2564) RRF PF01765.19 gi|21227773|ref|NP_633695.1| - 0.54 10.2 7.1 5.7 6.9 1.3 2.4 2 0 0 2 2 2 0 Ribosome recycling factor OmpH PF03938.14 gi|21227773|ref|NP_633695.1| - 1.4 9.3 6.4 6 7.2 0.4 3.0 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) RPN7 PF10602.9 gi|21227773|ref|NP_633695.1| - 4.3 7.0 5.8 47 3.6 0.9 3.0 3 0 0 3 3 3 0 26S proteasome subunit RPN7 FAM25 PF15825.5 gi|21227773|ref|NP_633695.1| - 4.4 7.7 5.9 2 8.8 0.6 2.9 3 0 0 3 3 3 0 FAM25 family Methyltransf_11 PF08241.12 gi|21227774|ref|NP_633696.1| - 1.3e-15 57.8 0.0 2.4e-15 57.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21227774|ref|NP_633696.1| - 8.3e-09 36.0 0.0 2.1e-08 34.7 0.0 1.8 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227774|ref|NP_633696.1| - 0.0004 20.2 0.0 0.00062 19.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21227774|ref|NP_633696.1| - 0.0016 17.8 0.0 0.002 17.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|21227774|ref|NP_633696.1| - 0.0029 18.3 0.0 0.0069 17.1 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21227774|ref|NP_633696.1| - 0.0095 15.8 0.0 0.036 13.9 0.0 1.8 1 1 0 2 2 2 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|21227774|ref|NP_633696.1| - 0.088 12.6 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase CMAS PF02353.20 gi|21227774|ref|NP_633696.1| - 0.13 11.5 0.1 0.26 10.5 0.0 1.5 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase Mac PF12464.8 gi|21227775|ref|NP_633697.1| - 3e-16 59.4 0.2 5.7e-16 58.5 0.2 1.4 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep PF00132.24 gi|21227775|ref|NP_633697.1| - 6.4e-13 47.9 13.5 2.2e-10 39.8 5.4 3.1 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21227775|ref|NP_633697.1| - 7.1e-10 38.5 4.0 7.1e-10 38.5 4.0 2.6 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Ala_racemase_N PF01168.20 gi|21227777|ref|NP_633699.1| - 1.6e-26 93.3 0.0 1.9e-26 93.1 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Uteroglobin PF01099.17 gi|21227777|ref|NP_633699.1| - 0.089 13.1 0.0 0.23 11.8 0.0 1.7 1 0 0 1 1 1 0 Uteroglobin family Mito_fiss_Elm1 PF06258.11 gi|21227777|ref|NP_633699.1| - 0.14 11.3 0.0 0.18 10.9 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial fission ELM1 Lactamase_B PF00753.27 gi|21227778|ref|NP_633700.1| - 3.8e-12 46.6 1.7 1.4e-11 44.8 1.7 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|21227778|ref|NP_633700.1| - 0.0002 20.9 0.8 0.00033 20.2 0.0 1.7 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Trypan_PARP PF05887.11 gi|21227778|ref|NP_633700.1| - 0.0039 17.2 20.4 0.0039 17.2 20.4 2.7 3 0 0 3 3 3 1 Procyclic acidic repetitive protein (PARP) Lactamase_B_6 PF16661.5 gi|21227778|ref|NP_633700.1| - 0.011 15.2 0.0 0.019 14.4 0.0 1.4 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain NdhS PF11623.8 gi|21227778|ref|NP_633700.1| - 0.085 12.5 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S DNA_pol3_delta PF06144.13 gi|21227778|ref|NP_633700.1| - 0.19 11.5 0.1 0.34 10.7 0.1 1.3 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Lactonase PF10282.9 gi|21227779|ref|NP_633701.1| - 1.4e-16 60.7 9.9 2.4e-06 27.0 0.7 4.4 2 1 1 4 4 4 3 Lactonase, 7-bladed beta-propeller PKD PF00801.20 gi|21227779|ref|NP_633701.1| - 1.5e-10 40.8 1.8 6.6e-10 38.7 1.8 2.2 1 0 0 1 1 1 1 PKD domain Cytochrom_D1 PF02239.16 gi|21227779|ref|NP_633701.1| - 6.6e-10 38.1 12.6 2.6e-05 23.0 0.4 4.1 3 2 1 4 4 4 3 Cytochrome D1 heme domain NHL PF01436.21 gi|21227779|ref|NP_633701.1| - 1.5e-09 37.4 18.6 0.32 11.1 0.0 6.9 6 0 0 6 6 6 5 NHL repeat Inhibitor_I42 PF09394.10 gi|21227779|ref|NP_633701.1| - 2.3e-09 37.5 0.0 1.1e-08 35.3 0.0 2.3 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 PD40 PF07676.12 gi|21227779|ref|NP_633701.1| - 1.9e-07 30.8 15.7 2.5 8.2 0.0 9.2 8 1 0 8 8 8 3 WD40-like Beta Propeller Repeat SGL PF08450.12 gi|21227779|ref|NP_633701.1| - 6.3e-06 26.0 20.9 0.00079 19.1 2.1 5.1 3 2 1 4 4 4 2 SMP-30/Gluconolactonase/LRE-like region PGF-CTERM PF18204.1 gi|21227779|ref|NP_633701.1| - 4e-05 23.4 0.3 7.1e-05 22.6 0.3 1.4 1 0 0 1 1 1 1 PGF-CTERM motif Arylesterase PF01731.20 gi|21227779|ref|NP_633701.1| - 0.00061 19.9 21.7 1.3 9.2 0.1 7.5 3 2 5 8 8 8 2 Arylesterase Arm-DNA-bind_3 PF13356.6 gi|21227779|ref|NP_633701.1| - 0.00066 20.0 0.0 6.9 7.1 0.0 4.4 1 1 0 2 2 2 1 Arm DNA-binding domain ANAPC4_WD40 PF12894.7 gi|21227779|ref|NP_633701.1| - 0.034 14.4 2.6 8.9 6.7 0.0 4.6 3 2 3 6 6 6 0 Anaphase-promoting complex subunit 4 WD40 domain Arc_PepC_II PF06847.11 gi|21227780|ref|NP_633702.1| - 1.9e-30 105.2 0.0 1.9e-30 105.2 0.0 2.0 2 1 0 2 2 2 1 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.18 gi|21227780|ref|NP_633702.1| - 1.1e-16 61.2 6.3 1.1e-16 61.2 6.3 2.2 2 1 1 3 3 3 1 Type IV leader peptidase family DUF1056 PF06341.11 gi|21227780|ref|NP_633702.1| - 0.29 11.5 6.5 0.21 11.9 1.6 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1056) Transposase_20 PF02371.16 gi|21227781|ref|NP_633703.1| - 1.4e-28 99.0 0.0 3.6e-28 97.7 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|21227781|ref|NP_633703.1| - 9.1e-20 71.1 0.2 2e-19 70.0 0.2 1.6 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.12 gi|21227781|ref|NP_633703.1| - 0.026 14.8 0.0 0.082 13.2 0.0 1.9 1 0 0 1 1 1 0 Orthopoxvirus F14 protein 5_3_exonuc PF01367.20 gi|21227781|ref|NP_633703.1| - 0.2 12.3 2.6 3.2 8.4 0.7 3.3 2 1 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold TP_methylase PF00590.20 gi|21227782|ref|NP_633704.1| - 1.6e-21 77.2 0.1 2.8e-20 73.2 0.1 2.0 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiD PF01888.17 gi|21227783|ref|NP_633705.1| - 1.1e-51 175.6 0.4 1.9e-51 174.8 0.4 1.4 1 0 0 1 1 1 1 CbiD sCache_like PF16736.5 gi|21227783|ref|NP_633705.1| - 0.1 12.7 0.1 0.37 10.9 0.0 2.0 3 0 0 3 3 3 0 Single Cache-like DNA_mis_repair PF01119.19 gi|21227784|ref|NP_633706.1| - 1.4e-37 128.0 0.0 2.6e-37 127.1 0.0 1.5 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.11 gi|21227784|ref|NP_633706.1| - 9.4e-34 116.3 0.0 2.1e-33 115.2 0.0 1.6 1 0 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.6 gi|21227784|ref|NP_633706.1| - 1.1e-13 51.1 0.1 2.9e-13 49.8 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|21227784|ref|NP_633706.1| - 6.6e-08 33.0 0.1 1.4e-07 32.0 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP2C_C PF07830.13 gi|21227784|ref|NP_633706.1| - 0.071 13.6 4.9 0.26 11.8 4.9 1.9 1 0 0 1 1 1 0 Protein serine/threonine phosphatase 2C, C-terminal domain DUF1476 PF07345.11 gi|21227784|ref|NP_633706.1| - 0.074 13.4 0.4 0.36 11.2 0.0 2.3 3 0 0 3 3 3 0 ATPase inhibitor subunit zeta MutS_V PF00488.21 gi|21227785|ref|NP_633707.1| - 2.3e-85 285.4 0.6 4.5e-85 284.4 0.1 1.8 2 0 0 2 2 2 1 MutS domain V MutS_I PF01624.20 gi|21227785|ref|NP_633707.1| - 1.9e-44 150.5 0.0 5.8e-44 148.9 0.0 1.9 2 0 0 2 2 2 1 MutS domain I MutS_III PF05192.18 gi|21227785|ref|NP_633707.1| - 5.8e-43 147.4 0.2 1.3e-42 146.2 0.2 1.6 1 0 0 1 1 1 1 MutS domain III MutS_IV PF05190.18 gi|21227785|ref|NP_633707.1| - 3.9e-32 110.5 0.4 1.2e-31 108.9 0.4 1.9 1 0 0 1 1 1 1 MutS family domain IV MutS_II PF05188.17 gi|21227785|ref|NP_633707.1| - 1.1e-22 80.8 0.0 4.7e-22 78.8 0.0 2.2 2 0 0 2 2 2 1 MutS domain II AAA_27 PF13514.6 gi|21227785|ref|NP_633707.1| - 0.0044 16.6 0.0 0.027 14.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|21227785|ref|NP_633707.1| - 0.063 13.0 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 gi|21227785|ref|NP_633707.1| - 0.11 12.5 0.0 0.37 10.8 0.0 2.0 1 0 0 1 1 1 0 AAA domain Acyl_transf_3 PF01757.22 gi|21227786|ref|NP_633708.1| - 6e-26 91.3 33.6 1e-25 90.5 33.6 1.4 1 1 0 1 1 1 1 Acyltransferase family SCFA_trans PF02667.14 gi|21227786|ref|NP_633708.1| - 0.028 13.4 6.9 0.14 11.1 2.3 2.2 2 0 0 2 2 2 0 Short chain fatty acid transporter CDP-OH_P_transf PF01066.21 gi|21227787|ref|NP_633709.1| - 7.1e-08 33.1 0.3 7.1e-08 33.1 0.3 2.3 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase GerA PF03323.13 gi|21227787|ref|NP_633709.1| - 0.27 9.6 1.0 0.36 9.2 1.0 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein CCG PF02754.16 gi|21227788|ref|NP_633710.1| - 5.6e-30 103.4 4.7 2.7e-14 53.1 0.2 2.4 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_10 PF13237.6 gi|21227788|ref|NP_633710.1| - 2.8e-06 27.3 17.4 2.8e-05 24.1 9.5 3.6 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21227788|ref|NP_633710.1| - 1.2e-05 25.6 5.9 1.2e-05 25.6 5.9 2.6 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21227788|ref|NP_633710.1| - 3.7e-05 24.2 7.8 3.7e-05 24.2 7.8 3.1 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21227788|ref|NP_633710.1| - 0.00023 20.8 11.2 0.004 16.9 3.2 3.7 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21227788|ref|NP_633710.1| - 0.00098 19.2 19.6 0.0017 18.5 11.9 3.9 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227788|ref|NP_633710.1| - 0.0016 18.4 11.0 0.0056 16.7 1.4 3.8 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21227788|ref|NP_633710.1| - 0.0017 19.2 12.9 0.013 16.4 0.2 3.2 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|21227788|ref|NP_633710.1| - 0.0022 18.0 9.6 0.011 15.8 1.2 4.0 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21227788|ref|NP_633710.1| - 0.0076 16.8 12.1 0.0076 16.8 12.1 3.3 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227788|ref|NP_633710.1| - 0.0091 16.4 0.5 0.0091 16.4 0.5 3.8 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|21227788|ref|NP_633710.1| - 0.039 14.5 9.2 0.4 11.3 0.1 3.0 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I AroM PF07302.11 gi|21227788|ref|NP_633710.1| - 0.18 11.2 0.0 9.7 5.5 0.0 2.5 3 0 0 3 3 3 0 AroM protein Fer4_15 PF13459.6 gi|21227788|ref|NP_633710.1| - 0.2 12.4 10.3 0.74 10.6 0.8 3.5 4 0 0 4 4 3 0 4Fe-4S single cluster domain SpoOE-like PF09388.10 gi|21227788|ref|NP_633710.1| - 0.37 10.7 1.6 0.42 10.5 0.1 1.9 2 0 0 2 2 2 0 Spo0E like sporulation regulatory protein Fer4_18 PF13746.6 gi|21227788|ref|NP_633710.1| - 1.2 9.4 11.9 0.9 9.8 0.2 2.9 4 0 0 4 4 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21227788|ref|NP_633710.1| - 2 8.6 21.7 0.89 9.7 12.9 3.7 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21227788|ref|NP_633710.1| - 6.4 8.0 29.4 0.29 12.2 3.7 4.3 4 0 0 4 4 4 0 4Fe-4S binding domain B12-binding PF02310.19 gi|21227789|ref|NP_633711.1| - 3.8e-26 91.5 0.3 5.5e-26 91.0 0.3 1.2 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|21227789|ref|NP_633711.1| - 6.6e-10 39.3 0.5 1.9e-09 37.8 0.2 2.0 2 0 0 2 2 2 1 B12 binding domain SpoVAD PF07451.11 gi|21227789|ref|NP_633711.1| - 0.054 12.2 0.1 0.06 12.0 0.1 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) MTTB PF06253.11 gi|21227790|ref|NP_633712.1| - 7.5e-58 195.7 0.0 8.8e-58 195.5 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) MTTB PF06253.11 gi|21227791|ref|NP_633713.1| - 2.6e-27 95.0 0.0 3e-27 94.8 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) B12-binding PF02310.19 gi|21227792|ref|NP_633714.1| - 7.8e-23 80.8 0.5 1.4e-22 80.0 0.5 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|21227792|ref|NP_633714.1| - 1.6e-19 70.1 2.2 1.6e-19 70.1 2.2 2.2 3 0 0 3 3 3 1 B12 binding domain EamA PF00892.20 gi|21227793|ref|NP_633715.1| - 8.6e-14 51.9 47.1 1e-06 28.9 17.8 3.3 3 1 0 3 3 3 3 EamA-like transporter family SepZ PF06066.11 gi|21227793|ref|NP_633715.1| - 8.4 6.7 9.3 12 6.2 2.2 3.0 2 2 1 3 3 3 0 SepZ Dimeth_Pyl PF09505.10 gi|21227795|ref|NP_633717.1| - 8.5e-198 657.6 2.7 9.6e-198 657.4 2.7 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) XFP_C PF09363.10 gi|21227795|ref|NP_633717.1| - 0.21 11.0 0.1 0.34 10.4 0.1 1.2 1 0 0 1 1 1 0 XFP C-terminal domain Dimeth_Pyl PF09505.10 gi|21227796|ref|NP_633718.1| - 1.1e-54 185.7 2.5 1.2e-54 185.6 2.5 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) FERM_f0 PF16511.5 gi|21227796|ref|NP_633718.1| - 0.012 15.9 0.1 0.025 14.9 0.0 1.5 2 0 0 2 2 2 0 N-terminal or F0 domain of Talin-head FERM PepSY PF03413.19 gi|21227797|ref|NP_633719.1| - 6e-25 87.6 5.9 1.3e-13 51.3 0.3 2.3 2 0 0 2 2 2 2 Peptidase propeptide and YPEB domain DUF5006 PF16397.5 gi|21227797|ref|NP_633719.1| - 0.0037 16.5 0.0 0.0082 15.4 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF5006) PepSY_2 PF13670.6 gi|21227797|ref|NP_633719.1| - 0.016 15.2 3.6 1.2 9.2 0.6 3.3 2 2 1 3 3 3 0 Peptidase propeptide and YPEB domain tRNA-synt_1f PF01921.18 gi|21227798|ref|NP_633720.1| - 2.8e-131 437.7 0.0 3.6e-131 437.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|21227798|ref|NP_633720.1| - 1.5e-09 37.1 0.0 0.00036 19.4 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|21227798|ref|NP_633720.1| - 1.4e-05 24.6 0.0 0.12 11.7 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain HypA PF01155.19 gi|21227798|ref|NP_633720.1| - 0.097 12.7 0.0 0.53 10.3 0.0 2.2 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Methyltransf_11 PF08241.12 gi|21227799|ref|NP_633721.1| - 1.7e-16 60.6 0.0 2.9e-16 59.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21227799|ref|NP_633721.1| - 6.5e-15 55.6 0.0 1.4e-14 54.5 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21227799|ref|NP_633721.1| - 1.4e-11 44.5 0.0 1.9e-11 44.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21227799|ref|NP_633721.1| - 5.5e-08 33.5 0.0 1e-07 32.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227799|ref|NP_633721.1| - 2.8e-06 27.2 0.0 3.5e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21227799|ref|NP_633721.1| - 0.00056 19.3 0.0 0.0014 18.1 0.0 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|21227799|ref|NP_633721.1| - 0.12 12.0 0.0 0.16 11.5 0.0 1.4 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW MTS PF05175.14 gi|21227799|ref|NP_633721.1| - 0.18 11.3 0.0 0.27 10.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain BofA PF07441.11 gi|21227800|ref|NP_633722.1| - 1.1e-10 41.5 14.8 1.3e-10 41.4 14.8 1.0 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA ABC2_membrane PF01061.24 gi|21227800|ref|NP_633722.1| - 0.65 9.4 10.2 0.69 9.3 10.2 1.0 1 0 0 1 1 1 0 ABC-2 type transporter Nuc_deoxyrib_tr PF05014.15 gi|21227801|ref|NP_633723.1| - 5.1e-07 29.8 0.0 6.2e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase BKACE PF05853.12 gi|21227801|ref|NP_633723.1| - 0.051 12.9 0.0 0.061 12.6 0.0 1.1 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme Nuc_deoxyri_tr2 PF15891.5 gi|21227801|ref|NP_633723.1| - 0.16 12.3 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase like Peptidase_U32 PF01136.19 gi|21227802|ref|NP_633724.1| - 5.6e-126 418.4 0.0 1.8e-84 282.5 0.0 2.2 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.8 gi|21227802|ref|NP_633724.1| - 6.8e-28 97.4 0.2 2.4e-26 92.5 0.4 2.4 2 0 0 2 2 2 1 Collagenase Dus PF01207.17 gi|21227802|ref|NP_633724.1| - 0.038 13.1 0.0 5.9 5.9 0.0 3.6 4 0 0 4 4 4 0 Dihydrouridine synthase (Dus) NAD_binding_10 PF13460.6 gi|21227803|ref|NP_633725.1| - 4.8e-17 62.5 0.0 8.3e-17 61.7 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding NmrA PF05368.13 gi|21227803|ref|NP_633725.1| - 4.9e-16 59.0 0.0 7.7e-16 58.4 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 gi|21227803|ref|NP_633725.1| - 2.6e-07 30.4 0.0 4.4e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family TrkA_N PF02254.18 gi|21227803|ref|NP_633725.1| - 3.6e-05 24.0 0.0 6.7e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain GDP_Man_Dehyd PF16363.5 gi|21227803|ref|NP_633725.1| - 0.0037 16.7 0.0 0.0056 16.1 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|21227803|ref|NP_633725.1| - 0.013 14.6 0.0 0.019 14.0 0.0 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family ApbA PF02558.16 gi|21227803|ref|NP_633725.1| - 0.021 14.5 0.0 0.035 13.7 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA GPAT_N PF14829.6 gi|21227803|ref|NP_633725.1| - 0.028 14.4 0.0 0.086 12.8 0.0 1.8 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase N-terminal PAC2 PF09754.9 gi|21227803|ref|NP_633725.1| - 0.11 12.5 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 PAC2 family RmlD_sub_bind PF04321.17 gi|21227803|ref|NP_633725.1| - 0.14 11.2 0.0 0.71 8.9 0.1 1.9 2 0 0 2 2 2 0 RmlD substrate binding domain AtuA PF07287.11 gi|21227803|ref|NP_633725.1| - 0.16 10.6 0.0 0.26 10.0 0.0 1.4 1 0 0 1 1 1 0 Acyclic terpene utilisation family protein AtuA MazG PF03819.17 gi|21227805|ref|NP_633727.1| - 1.6e-15 57.0 0.0 1.9e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 gi|21227805|ref|NP_633727.1| - 0.00054 20.3 0.7 0.00065 20.1 0.7 1.2 1 1 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG-like PF12643.7 gi|21227805|ref|NP_633727.1| - 0.0028 17.9 0.0 0.0045 17.2 0.0 1.2 1 0 0 1 1 1 1 MazG-like family DUF3782 PF12644.7 gi|21227805|ref|NP_633727.1| - 0.015 15.5 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3782) His_biosynth PF00977.21 gi|21227806|ref|NP_633728.1| - 1.2e-90 303.0 0.2 1.4e-90 302.8 0.2 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 gi|21227806|ref|NP_633728.1| - 7.2e-06 25.5 0.3 0.0041 16.6 0.2 2.2 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator ThiG PF05690.14 gi|21227806|ref|NP_633728.1| - 1.3e-05 24.7 0.2 0.097 12.0 0.1 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|21227806|ref|NP_633728.1| - 5.2e-05 22.8 0.1 0.09 12.1 0.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase Dus PF01207.17 gi|21227806|ref|NP_633728.1| - 7e-05 22.1 0.0 0.0025 16.9 0.0 2.1 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) TMP-TENI PF02581.17 gi|21227806|ref|NP_633728.1| - 0.00018 20.9 0.1 0.16 11.3 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase IMPDH PF00478.25 gi|21227806|ref|NP_633728.1| - 0.00025 20.2 0.2 0.12 11.4 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 gi|21227806|ref|NP_633728.1| - 0.00078 18.7 0.1 1 8.5 0.0 2.2 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase PcrB PF01884.17 gi|21227806|ref|NP_633728.1| - 0.02 14.4 0.3 0.053 13.0 0.1 1.8 3 0 0 3 3 3 0 PcrB family DNase-RNase PF02577.14 gi|21227807|ref|NP_633729.1| - 2.2e-37 127.6 0.1 2.5e-37 127.4 0.1 1.1 1 0 0 1 1 1 1 Bifunctional nuclease BRE PF06113.12 gi|21227807|ref|NP_633729.1| - 0.024 13.5 0.0 0.029 13.2 0.0 1.1 1 0 0 1 1 1 0 Brain and reproductive organ-expressed protein (BRE) PCMT PF01135.19 gi|21227808|ref|NP_633730.1| - 2.2e-71 240.0 0.1 2.7e-71 239.7 0.1 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|21227808|ref|NP_633730.1| - 3.6e-08 33.3 0.0 7.8e-08 32.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|21227808|ref|NP_633730.1| - 1.8e-07 31.1 0.0 3.1e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Fibrillarin PF01269.17 gi|21227808|ref|NP_633730.1| - 8.9e-06 25.0 0.0 1.6e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Fibrillarin Ubie_methyltran PF01209.18 gi|21227808|ref|NP_633730.1| - 1.3e-05 24.7 0.0 1.9e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_3 PF01596.17 gi|21227808|ref|NP_633730.1| - 0.00018 20.8 0.1 0.0012 18.1 0.0 2.0 2 0 0 2 2 2 1 O-methyltransferase Methyltransf_25 PF13649.6 gi|21227808|ref|NP_633730.1| - 0.0004 21.0 0.0 0.00074 20.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|21227808|ref|NP_633730.1| - 0.0012 18.6 0.0 0.0028 17.3 0.0 1.6 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_23 PF13489.6 gi|21227808|ref|NP_633730.1| - 0.0014 18.4 0.0 0.0054 16.6 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|21227808|ref|NP_633730.1| - 0.0051 15.9 0.0 0.0076 15.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|21227808|ref|NP_633730.1| - 0.0075 16.9 0.1 0.034 14.8 0.1 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|21227808|ref|NP_633730.1| - 0.013 16.5 0.0 0.096 13.7 0.0 2.3 1 1 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 gi|21227808|ref|NP_633730.1| - 0.029 13.9 0.0 0.045 13.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain CMAS PF02353.20 gi|21227808|ref|NP_633730.1| - 0.042 13.1 0.0 0.062 12.6 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase ACP_syn_III_C PF08541.10 gi|21227808|ref|NP_633730.1| - 0.13 12.4 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Elf1 PF05129.13 gi|21227809|ref|NP_633731.1| - 0.032 14.3 0.4 0.069 13.2 0.4 1.5 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like DUF4625 PF15418.6 gi|21227809|ref|NP_633731.1| - 0.042 14.1 0.1 0.081 13.2 0.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4625) DUF2387 PF09526.10 gi|21227809|ref|NP_633731.1| - 0.096 12.8 0.6 0.25 11.5 0.6 1.7 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) zinc_ribbon_4 PF13717.6 gi|21227809|ref|NP_633731.1| - 0.12 12.4 0.4 0.29 11.1 0.4 1.7 1 0 0 1 1 1 0 zinc-ribbon domain CTP-dep_RFKase PF01982.16 gi|21227811|ref|NP_633733.1| - 6.9e-47 158.5 0.0 1e-46 157.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 HxlR PF01638.17 gi|21227811|ref|NP_633733.1| - 0.07 13.0 0.1 0.16 11.8 0.1 1.7 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DHBP_synthase PF00926.19 gi|21227812|ref|NP_633734.1| - 6.5e-60 202.0 0.0 7.9e-60 201.7 0.0 1.1 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PEP-utilizers PF00391.23 gi|21227812|ref|NP_633734.1| - 0.088 12.5 0.0 0.41 10.4 0.0 2.0 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain Cation_efflux PF01545.21 gi|21227813|ref|NP_633735.1| - 2.1e-45 154.9 11.6 2.5e-45 154.6 11.6 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|21227813|ref|NP_633735.1| - 2.7e-21 75.5 0.6 4.7e-21 74.7 0.6 1.4 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Intg_mem_TP0381 PF09529.10 gi|21227813|ref|NP_633735.1| - 0.0072 15.9 0.7 0.0072 15.9 0.7 2.0 1 1 1 2 2 2 1 Integral membrane protein (intg_mem_TP0381) MLANA PF14991.6 gi|21227813|ref|NP_633735.1| - 0.1 12.9 0.0 0.36 11.1 0.0 1.9 1 1 0 1 1 1 0 Protein melan-A Chorismate_synt PF01264.21 gi|21227814|ref|NP_633736.1| - 6e-147 488.6 0.1 6.8e-147 488.4 0.1 1.0 1 0 0 1 1 1 1 Chorismate synthase DUF3160 PF11369.8 gi|21227815|ref|NP_633737.1| - 6.6e-234 778.1 5.7 7.8e-234 777.8 5.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) DUF4494 PF14902.6 gi|21227815|ref|NP_633737.1| - 0.3 10.9 2.5 1.1 9.0 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4494) ID PF18543.1 gi|21227816|ref|NP_633738.1| - 0.035 14.1 0.5 2.7 8.1 0.0 2.7 2 1 1 3 3 3 0 Intracellular delivery domain DUF1724 PF08350.10 gi|21227818|ref|NP_633740.1| - 6.9e-18 64.6 1.2 1.7e-17 63.3 0.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HxlR PF01638.17 gi|21227818|ref|NP_633740.1| - 0.0004 20.2 0.0 0.00098 18.9 0.0 1.6 1 0 0 1 1 1 1 HxlR-like helix-turn-helix LolA_like PF17131.4 gi|21227819|ref|NP_633741.1| - 2.3e-13 50.3 0.4 5.6e-13 49.0 0.4 1.6 1 1 0 1 1 1 1 Outer membrane lipoprotein-sorting protein DUF2092 PF09865.9 gi|21227819|ref|NP_633741.1| - 2.6e-08 33.5 0.2 1.4e-06 27.8 0.2 2.1 1 1 0 1 1 1 1 Predicted periplasmic protein (DUF2092) MucB_RseB PF03888.14 gi|21227819|ref|NP_633741.1| - 2.4e-06 27.2 0.0 1.2e-05 24.9 0.0 2.0 2 0 0 2 2 2 1 MucB/RseB N-terminal domain DUF4367 PF14285.6 gi|21227819|ref|NP_633741.1| - 2.2e-05 24.9 12.3 0.00015 22.2 8.7 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4367) LolA PF03548.15 gi|21227819|ref|NP_633741.1| - 4.4e-05 23.2 0.6 0.049 13.3 0.0 2.6 3 0 0 3 3 3 2 Outer membrane lipoprotein carrier protein LolA DUF1571 PF07608.11 gi|21227819|ref|NP_633741.1| - 0.00022 20.7 0.0 0.00048 19.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1571) DUF1329 PF07044.11 gi|21227819|ref|NP_633741.1| - 0.00086 18.7 0.0 0.0013 18.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1329) FSAP_sig_propep PF03032.15 gi|21227819|ref|NP_633741.1| - 0.18 11.8 0.1 0.18 11.8 0.1 1.7 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide DUF4781 PF16013.5 gi|21227820|ref|NP_633742.1| - 0.022 13.6 0.2 0.044 12.6 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) RRG8 PF17068.5 gi|21227820|ref|NP_633742.1| - 0.026 13.9 2.1 0.03 13.7 1.4 1.4 1 1 0 1 1 1 0 Required for respiratory growth protein 8 mitochondrial SHS2_FTSA PF02491.20 gi|21227820|ref|NP_633742.1| - 0.17 12.3 0.8 0.32 11.4 0.4 1.6 2 0 0 2 2 2 0 SHS2 domain inserted in FTSA DUF3852 PF12963.7 gi|21227820|ref|NP_633742.1| - 0.23 11.8 0.1 0.23 11.8 0.1 1.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3852) DUF1724 PF08350.10 gi|21227823|ref|NP_633745.1| - 5.8e-18 64.8 1.0 1.7e-17 63.3 0.4 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HxlR PF01638.17 gi|21227823|ref|NP_633745.1| - 0.00018 21.3 0.1 0.00055 19.7 0.1 1.8 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_27 PF13463.6 gi|21227823|ref|NP_633745.1| - 0.0096 16.4 0.1 0.02 15.4 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_47 PF16221.5 gi|21227823|ref|NP_633745.1| - 0.097 12.2 0.1 0.21 11.2 0.1 1.6 1 0 0 1 1 1 0 winged helix-turn-helix HTH_5 PF01022.20 gi|21227823|ref|NP_633745.1| - 0.34 10.8 1.8 0.42 10.5 0.3 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family DUF4375 PF14300.6 gi|21227824|ref|NP_633746.1| - 0.14 12.4 0.2 0.26 11.6 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4375) Radical_SAM PF04055.21 gi|21227828|ref|NP_633750.1| - 1.2e-25 90.8 0.1 5.1e-25 88.8 0.0 2.1 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|21227828|ref|NP_633750.1| - 3.5e-09 37.0 0.0 7.2e-09 36.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|21227828|ref|NP_633750.1| - 4.5e-08 33.5 1.3 9.1e-08 32.5 1.3 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.6 gi|21227828|ref|NP_633750.1| - 6.1e-06 26.4 0.0 1.5e-05 25.1 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain AsnC_trans_reg2 PF17805.1 gi|21227829|ref|NP_633751.1| - 5.8e-23 80.8 0.0 1.1e-22 80.0 0.0 1.4 1 0 0 1 1 1 1 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|21227829|ref|NP_633751.1| - 3.5e-07 29.9 0.1 8e-07 28.8 0.1 1.7 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|21227829|ref|NP_633751.1| - 0.0065 16.0 5.6 0.059 12.9 1.9 3.0 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|21227829|ref|NP_633751.1| - 0.026 14.6 0.0 0.051 13.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain 3H PF02829.14 gi|21227829|ref|NP_633751.1| - 0.16 12.3 0.0 0.42 10.9 0.0 1.7 2 0 0 2 2 2 0 3H domain AsnC_trans_reg2 PF17805.1 gi|21227830|ref|NP_633752.1| - 7.1e-34 115.8 0.1 1.5e-33 114.8 0.0 1.5 2 0 0 2 2 2 1 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|21227830|ref|NP_633752.1| - 2.8e-05 23.9 0.0 5.7e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|21227830|ref|NP_633752.1| - 0.0032 17.0 0.3 0.24 11.0 0.1 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding FERM_f0 PF16511.5 gi|21227830|ref|NP_633752.1| - 0.0068 16.7 0.0 0.011 16.0 0.0 1.4 1 0 0 1 1 1 1 N-terminal or F0 domain of Talin-head FERM AsnC_trans_reg PF01037.21 gi|21227830|ref|NP_633752.1| - 0.015 15.2 0.0 0.28 11.2 0.0 2.2 2 0 0 2 2 2 0 Lrp/AsnC ligand binding domain DegV PF02645.16 gi|21227830|ref|NP_633752.1| - 0.05 12.9 0.0 0.078 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 DDRGK PF09756.9 gi|21227830|ref|NP_633752.1| - 0.056 13.0 0.0 0.093 12.3 0.0 1.2 1 0 0 1 1 1 0 DDRGK domain MarR_2 PF12802.7 gi|21227830|ref|NP_633752.1| - 0.065 13.1 0.0 0.099 12.5 0.0 1.3 1 0 0 1 1 1 0 MarR family FaeA PF04703.12 gi|21227830|ref|NP_633752.1| - 0.092 13.1 0.0 0.62 10.5 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein IF2_N PF04760.15 gi|21227830|ref|NP_633752.1| - 0.12 12.2 0.2 0.42 10.5 0.0 2.1 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HTH_Tnp_ISL3 PF13542.6 gi|21227830|ref|NP_633752.1| - 0.16 11.4 0.0 0.46 9.9 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_36 PF13730.6 gi|21227830|ref|NP_633752.1| - 0.17 11.9 0.0 0.38 10.7 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain Y1_Tnp PF01797.16 gi|21227831|ref|NP_633753.1| - 9.4e-39 132.3 0.8 1.1e-38 132.1 0.8 1.0 1 0 0 1 1 1 1 Transposase IS200 like Cactin_mid PF10312.9 gi|21227831|ref|NP_633753.1| - 0.033 13.9 0.0 2.8 7.6 0.0 2.2 2 0 0 2 2 2 0 Conserved mid region of cactin OrfB_Zn_ribbon PF07282.11 gi|21227832|ref|NP_633754.1| - 9.6e-24 83.1 0.4 1.9e-23 82.2 0.4 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|21227832|ref|NP_633754.1| - 1.9e-22 79.8 0.0 4.2e-22 78.6 0.0 1.6 1 0 0 1 1 1 1 Probable transposase HTH_OrfB_IS605 PF12323.8 gi|21227832|ref|NP_633754.1| - 9.5e-15 53.8 1.6 1.9e-14 52.9 1.6 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-C3HC4_3 PF13920.6 gi|21227832|ref|NP_633754.1| - 0.02 14.7 1.3 0.035 14.0 1.3 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_SprT PF17283.2 gi|21227832|ref|NP_633754.1| - 0.029 14.3 0.3 0.06 13.3 0.3 1.5 1 0 0 1 1 1 0 SprT-like zinc ribbon domain DZR PF12773.7 gi|21227832|ref|NP_633754.1| - 0.034 14.2 1.1 0.067 13.2 1.1 1.4 1 0 0 1 1 1 0 Double zinc ribbon Rad50_zn_hook PF04423.14 gi|21227832|ref|NP_633754.1| - 0.46 10.4 2.3 0.7 9.8 0.0 2.4 3 0 0 3 3 3 0 Rad50 zinc hook motif DUF1451 PF07295.11 gi|21227832|ref|NP_633754.1| - 2.6 8.1 4.7 9.6 6.2 4.7 2.1 1 1 0 1 1 1 0 Zinc-ribbon containing domain DUF1724 PF08350.10 gi|21227834|ref|NP_633756.1| - 5.9e-18 64.8 1.1 1.7e-17 63.3 0.4 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HxlR PF01638.17 gi|21227834|ref|NP_633756.1| - 0.001 18.9 0.2 0.0033 17.2 0.2 1.8 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 gi|21227834|ref|NP_633756.1| - 0.44 10.4 1.9 0.52 10.2 0.3 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Peptidase_M10 PF00413.24 gi|21227835|ref|NP_633757.1| - 3.9e-15 56.0 0.1 5.3e-15 55.6 0.1 1.3 1 1 0 1 1 1 1 Matrixin Peptidase_M43 PF05572.13 gi|21227835|ref|NP_633757.1| - 0.01 15.8 1.8 0.01 15.7 0.8 1.7 1 1 1 2 2 2 0 Pregnancy-associated plasma protein-A Reprolysin_3 PF13582.6 gi|21227835|ref|NP_633757.1| - 0.037 14.6 0.3 0.06 13.9 0.3 1.6 1 1 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like MRVI1 PF05781.12 gi|21227835|ref|NP_633757.1| - 0.15 10.7 0.1 0.2 10.3 0.1 1.1 1 0 0 1 1 1 0 MRVI1 protein DASH_Spc19 PF08287.11 gi|21227837|ref|NP_633759.1| - 0.0056 16.6 0.0 0.0062 16.4 0.0 1.1 1 0 0 1 1 1 1 Spc19 SlyX PF04102.12 gi|21227837|ref|NP_633759.1| - 0.019 15.6 0.1 0.026 15.1 0.1 1.2 1 0 0 1 1 1 0 SlyX DDE_Tnp_IS66 PF03050.14 gi|21227838|ref|NP_633760.1| - 1.5e-73 247.7 0.0 1.8e-73 247.5 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21227838|ref|NP_633760.1| - 4.2e-09 36.7 4.4 1.3e-08 35.1 4.4 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21227838|ref|NP_633760.1| - 3.7e-05 24.0 1.6 0.12 12.6 0.1 3.0 2 1 0 3 3 3 2 DDE domain DZR PF12773.7 gi|21227838|ref|NP_633760.1| - 0.041 13.9 0.6 0.2 11.7 0.3 2.4 2 1 0 2 2 2 0 Double zinc ribbon zf-RING_5 PF14634.6 gi|21227838|ref|NP_633760.1| - 0.12 12.4 5.5 0.98 9.4 0.0 3.1 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_2 PF13240.6 gi|21227838|ref|NP_633760.1| - 0.13 12.1 6.1 2.6 7.9 0.2 2.8 2 0 0 2 2 2 0 zinc-ribbon domain Thioredoxin_2 PF13098.6 gi|21227838|ref|NP_633760.1| - 0.27 11.7 1.5 0.47 10.9 0.3 2.0 2 0 0 2 2 2 0 Thioredoxin-like domain zf-ribbon_3 PF13248.6 gi|21227838|ref|NP_633760.1| - 0.62 9.5 6.3 1 8.9 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21227838|ref|NP_633760.1| - 0.89 9.7 3.7 5.5 7.2 2.3 2.8 2 1 0 2 2 1 0 Zinc ribbon domain Mut7-C PF01927.16 gi|21227838|ref|NP_633760.1| - 2.8 8.1 4.9 0.88 9.7 1.8 1.7 2 0 0 2 2 2 0 Mut7-C RNAse domain zinc_ribbon_15 PF17032.5 gi|21227838|ref|NP_633760.1| - 2.8 8.7 7.0 0.37 11.6 1.6 2.2 2 1 0 2 2 2 0 zinc-ribbon family Lar_restr_allev PF14354.6 gi|21227838|ref|NP_633760.1| - 5 7.6 7.8 0.61 10.5 0.3 2.9 3 0 0 3 3 3 0 Restriction alleviation protein Lar YhfH PF14149.6 gi|21227838|ref|NP_633760.1| - 8.9 6.4 8.7 42 4.2 0.2 3.5 3 0 0 3 3 3 0 YhfH-like protein Radical_SAM PF04055.21 gi|21227839|ref|NP_633761.1| - 1e-25 91.1 0.2 6.5e-25 88.4 0.0 2.3 1 1 2 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|21227839|ref|NP_633761.1| - 2.2e-09 37.7 0.0 4.2e-09 36.8 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|21227839|ref|NP_633761.1| - 4.5e-08 33.5 1.2 8.7e-08 32.6 1.2 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.6 gi|21227839|ref|NP_633761.1| - 3.2e-06 27.3 0.0 6.6e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Glycos_trans_3N PF02885.17 gi|21227839|ref|NP_633761.1| - 0.15 11.9 0.5 0.86 9.5 0.2 2.5 2 1 0 2 2 2 0 Glycosyl transferase family, helical bundle domain HTH_AsnC-type PF13404.6 gi|21227840|ref|NP_633762.1| - 1.1e-09 37.9 0.1 2.1e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|21227840|ref|NP_633762.1| - 5.7e-05 22.6 0.7 0.1 12.2 0.1 2.3 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|21227840|ref|NP_633762.1| - 0.02 14.9 0.1 0.033 14.2 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain AsnC_trans_reg2 PF17805.1 gi|21227840|ref|NP_633762.1| - 0.031 14.4 0.0 0.078 13.1 0.0 1.7 2 0 0 2 2 2 0 AsnC-like ligand binding domain LexA_DNA_bind PF01726.16 gi|21227840|ref|NP_633762.1| - 0.031 14.0 0.2 0.071 12.9 0.2 1.6 1 1 0 1 1 1 0 LexA DNA binding domain TrmB PF01978.19 gi|21227840|ref|NP_633762.1| - 0.037 13.9 0.2 0.095 12.6 0.1 1.8 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB AsnC_trans_reg2 PF17805.1 gi|21227841|ref|NP_633763.1| - 7.1e-34 115.8 0.1 1.5e-33 114.8 0.0 1.5 2 0 0 2 2 2 1 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|21227841|ref|NP_633763.1| - 2.8e-05 23.9 0.0 5.7e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|21227841|ref|NP_633763.1| - 0.0032 17.0 0.3 0.24 11.0 0.1 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding FERM_f0 PF16511.5 gi|21227841|ref|NP_633763.1| - 0.0068 16.7 0.0 0.011 16.0 0.0 1.4 1 0 0 1 1 1 1 N-terminal or F0 domain of Talin-head FERM AsnC_trans_reg PF01037.21 gi|21227841|ref|NP_633763.1| - 0.015 15.2 0.0 0.28 11.2 0.0 2.2 2 0 0 2 2 2 0 Lrp/AsnC ligand binding domain DegV PF02645.16 gi|21227841|ref|NP_633763.1| - 0.05 12.9 0.0 0.078 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 DDRGK PF09756.9 gi|21227841|ref|NP_633763.1| - 0.056 13.0 0.0 0.093 12.3 0.0 1.2 1 0 0 1 1 1 0 DDRGK domain MarR_2 PF12802.7 gi|21227841|ref|NP_633763.1| - 0.065 13.1 0.0 0.099 12.5 0.0 1.3 1 0 0 1 1 1 0 MarR family FaeA PF04703.12 gi|21227841|ref|NP_633763.1| - 0.092 13.1 0.0 0.62 10.5 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein IF2_N PF04760.15 gi|21227841|ref|NP_633763.1| - 0.12 12.2 0.2 0.42 10.5 0.0 2.1 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HTH_Tnp_ISL3 PF13542.6 gi|21227841|ref|NP_633763.1| - 0.16 11.4 0.0 0.46 9.9 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_36 PF13730.6 gi|21227841|ref|NP_633763.1| - 0.17 11.9 0.0 0.38 10.7 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain NAD_binding_7 PF13241.6 gi|21227842|ref|NP_633764.1| - 7.5e-19 68.1 0.0 1.4e-18 67.3 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|21227842|ref|NP_633764.1| - 0.00038 20.7 0.0 0.019 15.2 0.1 2.2 1 1 1 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Sirohm_synth_M PF14824.6 gi|21227842|ref|NP_633764.1| - 0.0005 19.4 0.0 0.0011 18.4 0.0 1.6 1 0 0 1 1 1 1 Sirohaem biosynthesis protein central AlaDh_PNT_C PF01262.21 gi|21227842|ref|NP_633764.1| - 0.066 12.5 0.1 0.11 11.7 0.1 1.4 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Shikimate_DH PF01488.20 gi|21227843|ref|NP_633765.1| - 1.1e-42 145.3 0.1 1.1e-42 145.3 0.1 1.7 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GlutR_N PF05201.15 gi|21227843|ref|NP_633765.1| - 1.3e-37 128.8 0.0 2.7e-37 127.8 0.0 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.20 gi|21227843|ref|NP_633765.1| - 8.3e-20 71.0 0.6 2e-19 69.8 0.6 1.7 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain Sacchrp_dh_NADP PF03435.18 gi|21227843|ref|NP_633765.1| - 4.1e-06 27.1 2.3 7.3e-06 26.3 0.7 2.4 2 1 0 2 2 1 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|21227843|ref|NP_633765.1| - 8.3e-06 26.3 0.1 2.8e-05 24.6 0.1 2.0 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|21227843|ref|NP_633765.1| - 2.7e-05 23.6 0.0 5e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Glu_dehyd_C PF16912.5 gi|21227843|ref|NP_633765.1| - 4.5e-05 23.0 0.2 9.3e-05 22.0 0.2 1.5 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus NAD_binding_7 PF13241.6 gi|21227843|ref|NP_633765.1| - 6.4e-05 23.4 0.1 0.00023 21.6 0.0 2.0 2 0 0 2 2 1 1 Putative NAD(P)-binding OCD_Mu_crystall PF02423.15 gi|21227843|ref|NP_633765.1| - 0.0013 17.8 0.1 0.0023 16.9 0.1 1.4 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family THF_DHG_CYH_C PF02882.19 gi|21227843|ref|NP_633765.1| - 0.0053 16.1 0.1 3 7.1 0.0 2.9 3 0 0 3 3 3 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_10 PF13460.6 gi|21227843|ref|NP_633765.1| - 0.021 14.7 0.1 0.051 13.5 0.1 1.7 1 0 0 1 1 1 0 NAD(P)H-binding Pyr_redox_2 PF07992.14 gi|21227843|ref|NP_633765.1| - 0.023 14.0 0.3 0.043 13.0 0.3 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|21227843|ref|NP_633765.1| - 0.026 14.8 0.3 0.13 12.5 0.3 2.2 1 0 0 1 1 1 0 TrkA-N domain IlvN PF07991.12 gi|21227843|ref|NP_633765.1| - 0.044 13.4 0.1 0.19 11.3 0.0 2.0 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain ThiF PF00899.21 gi|21227843|ref|NP_633765.1| - 0.046 13.1 0.4 0.11 11.9 0.4 1.6 1 0 0 1 1 1 0 ThiF family adh_short PF00106.25 gi|21227843|ref|NP_633765.1| - 0.052 13.0 0.2 0.12 11.8 0.2 1.6 1 0 0 1 1 1 0 short chain dehydrogenase ocr PF08684.10 gi|21227843|ref|NP_633765.1| - 0.082 13.4 0.0 1.6 9.3 0.0 2.5 2 0 0 2 2 2 0 DNA mimic ocr ApbA PF02558.16 gi|21227843|ref|NP_633765.1| - 0.13 11.9 0.2 0.39 10.3 0.1 1.9 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA SmpA_OmlA PF04355.13 gi|21227843|ref|NP_633765.1| - 0.16 11.8 0.0 4.9 7.0 0.0 2.5 2 0 0 2 2 2 0 SmpA / OmlA family DUF724 PF05266.14 gi|21227843|ref|NP_633765.1| - 0.25 11.2 3.1 0.51 10.1 3.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ALAD PF00490.21 gi|21227844|ref|NP_633766.1| - 1.4e-145 484.4 0.1 1.5e-145 484.3 0.1 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Aminotran_3 PF00202.21 gi|21227845|ref|NP_633767.1| - 6.9e-68 229.2 0.0 8.2e-68 228.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Porphobil_deam PF01379.20 gi|21227846|ref|NP_633768.1| - 1.3e-68 230.5 0.0 1.7e-68 230.2 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|21227846|ref|NP_633768.1| - 9.8e-13 48.3 0.1 2.6e-12 46.9 0.1 1.7 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain DHO_dh PF01180.21 gi|161485673|ref|NP_633769.2| - 6.9e-64 215.9 0.3 7.8e-64 215.7 0.3 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|161485673|ref|NP_633769.2| - 4.8e-12 45.6 0.2 7.1e-11 41.7 0.2 2.0 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|161485673|ref|NP_633769.2| - 0.00016 21.2 4.9 0.00016 21.2 4.9 1.7 2 1 0 2 2 2 1 Nitronate monooxygenase His_biosynth PF00977.21 gi|161485673|ref|NP_633769.2| - 0.00073 19.1 1.2 0.001 18.6 0.2 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 gi|161485673|ref|NP_633769.2| - 0.11 11.9 0.5 2 7.8 0.1 2.3 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator DUF561 PF04481.12 gi|161485673|ref|NP_633769.2| - 0.16 11.1 1.3 0.18 10.9 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF561) IMPDH PF00478.25 gi|161485673|ref|NP_633769.2| - 1.3 8.0 8.3 0.29 10.1 5.0 1.6 2 1 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain DHODB_Fe-S_bind PF10418.9 gi|21227848|ref|NP_633770.1| - 7.7e-12 44.8 4.7 1.6e-11 43.8 4.4 1.7 2 0 0 2 2 2 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|21227848|ref|NP_633770.1| - 4.7e-08 33.6 0.0 1.1e-07 32.5 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain LAMTOR5 PF16672.5 gi|21227848|ref|NP_633770.1| - 0.049 13.6 0.2 0.1 12.6 0.2 1.5 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 FAD_binding_6 PF00970.24 gi|21227848|ref|NP_633770.1| - 0.13 12.6 0.0 1.1 9.7 0.0 2.2 1 1 0 1 1 1 0 Oxidoreductase FAD-binding domain FAA_hydrolase PF01557.18 gi|21227849|ref|NP_633771.1| - 1.6e-71 240.4 0.0 2e-71 240.1 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.9 gi|21227849|ref|NP_633771.1| - 0.0096 16.8 0.0 0.022 15.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF2437) HTH_5 PF01022.20 gi|21227850|ref|NP_633772.1| - 0.0084 16.0 0.2 0.019 14.8 0.2 1.6 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family RepL PF05732.11 gi|21227850|ref|NP_633772.1| - 0.0097 15.4 0.1 0.024 14.1 0.1 1.8 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) TrmB PF01978.19 gi|21227850|ref|NP_633772.1| - 0.011 15.6 0.1 0.02 14.8 0.1 1.5 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MAT1-1-2 PF17043.5 gi|21227850|ref|NP_633772.1| - 0.028 14.3 0.0 0.036 13.9 0.0 1.2 1 1 0 1 1 1 0 Mating type protein 1-1-2 of unknown function Rrf2 PF02082.20 gi|21227850|ref|NP_633772.1| - 0.045 14.1 0.1 0.064 13.6 0.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator MarR PF01047.22 gi|21227850|ref|NP_633772.1| - 0.068 13.1 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 MarR family Nbl1_Borealin_N PF10444.9 gi|21227850|ref|NP_633772.1| - 0.084 12.5 1.0 0.14 11.8 0.2 1.8 2 0 0 2 2 2 0 Nbl1 / Borealin N terminal HTH_24 PF13412.6 gi|21227850|ref|NP_633772.1| - 0.085 12.4 0.1 0.15 11.6 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|21227850|ref|NP_633772.1| - 0.12 12.4 0.1 0.2 11.8 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain tRNA-synt_1c PF00749.21 gi|21227851|ref|NP_633773.1| - 1e-66 225.0 0.0 1.3e-66 224.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|21227851|ref|NP_633773.1| - 8.9e-29 100.6 0.0 1.8e-28 99.6 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain NosD PF05048.13 gi|21227852|ref|NP_633774.1| - 3.2e-45 154.3 13.6 4.9e-45 153.7 13.6 1.3 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21227852|ref|NP_633774.1| - 1.8e-14 53.9 14.2 2.8e-14 53.2 13.4 1.7 1 1 0 1 1 1 1 Right handed beta helix region DUF1565 PF07602.11 gi|21227852|ref|NP_633774.1| - 4e-05 23.1 10.7 0.1 11.9 6.9 3.0 1 1 1 3 3 3 3 Protein of unknown function (DUF1565) Pectate_lyase_3 PF12708.7 gi|21227852|ref|NP_633774.1| - 0.00018 21.5 2.9 0.00033 20.6 2.9 1.4 1 0 0 1 1 1 1 Pectate lyase superfamily protein Gram_pos_anchor PF00746.21 gi|21227852|ref|NP_633774.1| - 0.29 11.1 0.1 0.29 11.1 0.1 1.8 2 0 0 2 2 2 0 LPXTG cell wall anchor motif tRNA_anti-codon PF01336.25 gi|21227853|ref|NP_633775.1| - 4.6e-09 36.1 0.1 0.052 13.5 0.0 3.8 3 1 0 3 3 3 3 OB-fold nucleic acid binding domain RHH_6 PF16762.5 gi|21227854|ref|NP_633776.1| - 0.13 12.9 0.8 0.55 10.9 0.1 2.3 2 1 1 3 3 3 0 Ribbon-helix-helix domain 2-Hacid_dh_C PF02826.19 gi|21227855|ref|NP_633777.1| - 2.8e-61 206.0 0.0 4.8e-61 205.2 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|21227855|ref|NP_633777.1| - 2.5e-41 140.5 2.1 5.7e-41 139.3 0.6 2.2 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 gi|21227855|ref|NP_633777.1| - 2.5e-06 27.1 0.0 6.7e-06 25.8 0.0 1.8 1 0 0 1 1 1 1 ACT domain IlvN PF07991.12 gi|21227855|ref|NP_633777.1| - 1.9e-05 24.3 0.1 7.8e-05 22.3 0.0 2.0 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 gi|21227855|ref|NP_633777.1| - 0.0012 19.1 0.2 0.0012 19.1 0.2 2.4 3 0 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|21227855|ref|NP_633777.1| - 0.058 14.0 1.7 1.6 9.4 0.0 3.3 3 1 1 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent DUF2240 PF09999.9 gi|21227856|ref|NP_633778.1| - 4e-52 175.7 0.2 4.5e-52 175.5 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) Ribosomal_L18 PF17135.4 gi|21227857|ref|NP_633779.1| - 3.1e-10 39.8 0.1 3.6e-10 39.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|21227857|ref|NP_633779.1| - 6.2e-09 36.6 0.1 1.1e-08 35.8 0.1 1.5 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Trp_Tyr_perm PF03222.13 gi|21227857|ref|NP_633779.1| - 0.076 12.0 0.0 0.092 11.8 0.0 1.1 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family Ribosomal_L13 PF00572.18 gi|161485672|ref|NP_633780.2| - 2.7e-12 47.1 0.0 1.8e-10 41.1 0.0 2.1 1 1 0 1 1 1 1 Ribosomal protein L13 Acyl-CoA_dh_M PF02770.19 gi|161485672|ref|NP_633780.2| - 0.13 12.5 0.0 0.32 11.2 0.0 1.6 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, middle domain Ribosomal_S9 PF00380.19 gi|21227859|ref|NP_633781.1| - 4e-32 111.3 0.1 4.5e-32 111.1 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 RNA_pol_N PF01194.17 gi|21227860|ref|NP_633782.1| - 3.9e-30 103.9 0.4 4.2e-30 103.8 0.4 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit RNA_pol_Rpb6 PF01192.22 gi|21227861|ref|NP_633783.1| - 4.5e-13 48.9 0.0 5.6e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 Ribosomal_S2 PF00318.20 gi|21227862|ref|NP_633784.1| - 2.8e-24 85.5 0.0 1.7e-14 53.5 0.1 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 DUF3131 PF11329.8 gi|21227862|ref|NP_633784.1| - 0.044 12.9 0.0 0.058 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3131) Peripla_BP_4 PF13407.6 gi|21227862|ref|NP_633784.1| - 0.14 11.7 0.1 0.25 10.9 0.1 1.4 1 0 0 1 1 1 0 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 gi|21227862|ref|NP_633784.1| - 0.19 11.1 0.2 0.34 10.3 0.1 1.4 2 0 0 2 2 2 0 Periplasmic binding proteins and sugar binding domain of LacI family Memo PF01875.17 gi|21227863|ref|NP_633785.1| - 8.5e-82 274.3 0.0 9.6e-82 274.2 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.18 gi|21227863|ref|NP_633785.1| - 0.0065 15.6 0.0 0.008 15.3 0.0 1.2 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase GHMP_kinases_N PF00288.26 gi|21227864|ref|NP_633786.1| - 5.7e-17 61.7 0.7 5.7e-17 61.7 0.7 2.0 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|21227864|ref|NP_633786.1| - 1.5e-13 50.9 0.8 1.5e-13 50.9 0.8 2.4 3 1 0 3 3 3 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.9 gi|21227864|ref|NP_633786.1| - 0.0096 15.5 0.0 0.025 14.1 0.0 1.7 1 0 0 1 1 1 1 Galactokinase galactose-binding signature AA_kinase PF00696.28 gi|21227865|ref|NP_633787.1| - 2.9e-40 138.4 0.1 3.3e-40 138.2 0.1 1.0 1 0 0 1 1 1 1 Amino acid kinase family NADH-G_4Fe-4S_3 PF10588.9 gi|21227865|ref|NP_633787.1| - 0.17 11.4 0.2 0.53 9.9 0.1 1.9 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FMN_dh PF01070.18 gi|21227866|ref|NP_633788.1| - 4.4e-34 118.0 0.9 1.4e-23 83.5 0.4 2.4 1 1 1 3 3 3 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|21227866|ref|NP_633788.1| - 5.8e-05 22.2 9.4 0.0033 16.5 0.1 3.7 2 2 1 3 3 3 2 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 gi|21227866|ref|NP_633788.1| - 0.00011 21.7 0.9 0.00019 20.9 0.9 1.6 1 1 0 1 1 1 1 Nitronate monooxygenase DHO_dh PF01180.21 gi|21227866|ref|NP_633788.1| - 0.0012 18.1 1.8 0.023 13.9 0.0 2.4 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Glu_synthase PF01645.17 gi|21227866|ref|NP_633788.1| - 0.0027 16.9 0.2 0.0049 16.1 0.2 1.4 1 0 0 1 1 1 1 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|21227866|ref|NP_633788.1| - 0.021 14.3 0.5 1 8.8 0.1 2.6 3 0 0 3 3 3 0 Histidine biosynthesis protein G3P_antiterm PF04309.12 gi|21227866|ref|NP_633788.1| - 0.16 11.4 0.3 1.2 8.6 0.0 2.2 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator ORC4_C PF14629.6 gi|21227867|ref|NP_633789.1| - 0.016 14.5 0.8 0.019 14.3 0.8 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus Lactamase_B_2 PF12706.7 gi|21227868|ref|NP_633790.1| - 9.4e-10 38.3 2.1 4e-09 36.3 0.1 2.4 3 0 0 3 3 3 1 Beta-lactamase superfamily domain RMMBL PF07521.12 gi|21227868|ref|NP_633790.1| - 1.7e-08 34.3 1.0 4.4e-08 32.9 0.2 2.1 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|21227868|ref|NP_633790.1| - 5e-08 33.2 0.1 1.2e-07 32.0 0.1 1.7 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily polyprenyl_synt PF00348.17 gi|21227869|ref|NP_633791.1| - 2.1e-71 240.0 0.0 2.6e-71 239.7 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase FtsH_ext PF06480.15 gi|21227870|ref|NP_633792.1| - 4.8 7.6 9.5 1.1 9.7 2.2 2.8 3 1 0 3 3 3 0 FtsH Extracellular Y1_Tnp PF01797.16 gi|21227871|ref|NP_633793.1| - 3.8e-35 120.6 1.6 4.7e-35 120.3 1.6 1.1 1 0 0 1 1 1 1 Transposase IS200 like PEP-utilizers_C PF02896.18 gi|21227872|ref|NP_633794.1| - 7.5e-94 314.1 0.1 1.4e-93 313.2 0.1 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 gi|21227872|ref|NP_633794.1| - 2.6e-65 220.9 0.0 4.1e-48 164.3 0.0 3.2 1 1 1 2 2 2 2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|21227872|ref|NP_633794.1| - 4.2e-28 96.9 0.9 1.1e-27 95.5 0.9 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PEP-utilisers_N PF05524.13 gi|21227872|ref|NP_633794.1| - 0.079 13.1 0.6 1.9 8.7 0.1 3.0 3 0 0 3 3 3 0 PEP-utilising enzyme, N-terminal Gar1 PF04410.14 gi|21227873|ref|NP_633795.1| - 3.1e-09 36.8 0.0 3.6e-09 36.6 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region TFIIB PF00382.19 gi|21227874|ref|NP_633796.1| - 1.5e-44 149.9 2.0 3.1e-21 75.2 0.4 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|21227874|ref|NP_633796.1| - 1.5e-18 66.0 0.9 1.5e-18 66.0 0.9 1.8 2 0 0 2 2 2 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|21227874|ref|NP_633796.1| - 0.00026 20.8 0.4 0.00065 19.6 0.4 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Sigma70_r4 PF04545.16 gi|21227874|ref|NP_633796.1| - 0.0035 16.8 0.5 0.019 14.4 0.1 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 Lar_restr_allev PF14354.6 gi|21227874|ref|NP_633796.1| - 0.005 17.2 1.4 0.049 14.0 0.3 2.7 3 0 0 3 3 3 1 Restriction alleviation protein Lar Cyclin_C PF02984.19 gi|21227874|ref|NP_633796.1| - 0.0062 16.6 0.0 5.3 7.2 0.0 2.6 3 0 0 3 3 2 2 Cyclin, C-terminal domain RPA_interact_C PF14768.6 gi|21227874|ref|NP_633796.1| - 0.0081 16.7 0.0 0.6 10.7 0.0 2.5 2 0 0 2 2 2 1 Replication protein A interacting C-terminal HTH_AsnC-type PF13404.6 gi|21227874|ref|NP_633796.1| - 0.015 15.1 0.4 0.057 13.3 0.2 2.2 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DZR PF12773.7 gi|21227874|ref|NP_633796.1| - 0.047 13.7 1.2 0.25 11.4 0.4 2.3 2 0 0 2 2 2 0 Double zinc ribbon A2L_zn_ribbon PF08792.10 gi|21227874|ref|NP_633796.1| - 0.13 12.1 1.5 0.49 10.2 1.5 2.0 1 1 0 1 1 1 0 A2L zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|21227874|ref|NP_633796.1| - 0.17 11.8 0.3 0.17 11.8 0.3 1.9 2 0 0 2 2 1 0 Transposase zinc-ribbon domain HTH_31 PF13560.6 gi|21227874|ref|NP_633796.1| - 0.2 12.0 3.7 7.7 6.9 0.1 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain Ribosomal_S27e PF01667.17 gi|21227874|ref|NP_633796.1| - 0.5 10.1 1.8 0.5 10.1 0.2 1.8 2 0 0 2 2 2 0 Ribosomal protein S27 Zn-ribbon_8 PF09723.10 gi|21227874|ref|NP_633796.1| - 0.65 10.2 6.3 0.46 10.7 0.6 3.1 2 1 1 3 3 3 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|21227874|ref|NP_633796.1| - 1.2 8.6 4.6 18 4.9 4.6 2.4 1 1 0 1 1 1 0 zinc-ribbon domain Methyltransf_13 PF08421.11 gi|21227874|ref|NP_633796.1| - 1.7 9.0 5.9 2.1 8.7 0.2 2.8 2 1 1 3 3 3 0 Putative zinc binding domain Nudix_N_2 PF14803.6 gi|21227874|ref|NP_633796.1| - 2.9 7.9 5.9 3.9 7.5 2.5 3.0 2 1 1 3 3 3 0 Nudix N-terminal LysE PF01810.18 gi|21227875|ref|NP_633797.1| - 2.8e-30 105.2 14.4 3.3e-30 105.0 14.4 1.0 1 0 0 1 1 1 1 LysE type translocator Sigma54_activ_2 PF14532.6 gi|21227876|ref|NP_633798.1| - 0.029 14.5 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain Met_10 PF02475.16 gi|21227877|ref|NP_633799.1| - 8.1e-64 215.0 0.0 1e-63 214.7 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|21227877|ref|NP_633799.1| - 4.5e-16 58.5 0.1 1e-15 57.3 0.1 1.6 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain MTS PF05175.14 gi|21227877|ref|NP_633799.1| - 7.4e-09 35.4 0.0 2.8e-08 33.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|21227877|ref|NP_633799.1| - 5.9e-08 33.3 0.0 5.4e-07 30.2 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227877|ref|NP_633799.1| - 1.5e-07 31.3 0.0 2.7e-07 30.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|21227877|ref|NP_633799.1| - 5e-07 29.5 0.0 7.5e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|21227877|ref|NP_633799.1| - 7e-07 28.9 0.0 1.2e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltr_RsmB-F PF01189.17 gi|21227877|ref|NP_633799.1| - 5.8e-06 26.1 0.0 0.00011 22.0 0.0 2.1 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F TRM PF02005.16 gi|21227877|ref|NP_633799.1| - 4.1e-05 22.9 0.0 5.1e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.10 gi|21227877|ref|NP_633799.1| - 0.00016 21.3 0.0 0.00026 20.6 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_24 PF13578.6 gi|21227877|ref|NP_633799.1| - 0.00038 21.4 0.0 0.00086 20.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|21227877|ref|NP_633799.1| - 0.00074 19.5 0.0 0.0015 18.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|21227877|ref|NP_633799.1| - 0.0014 18.0 0.0 0.0021 17.4 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_11 PF08241.12 gi|21227877|ref|NP_633799.1| - 0.0032 18.1 0.0 0.0085 16.7 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain ADH_zinc_N PF00107.26 gi|21227877|ref|NP_633799.1| - 0.0034 17.3 0.0 0.006 16.6 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_4 PF02390.17 gi|21227877|ref|NP_633799.1| - 0.004 16.6 0.0 0.007 15.8 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase RrnaAD PF00398.20 gi|21227877|ref|NP_633799.1| - 0.008 15.3 0.0 0.013 14.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PRMT5 PF05185.16 gi|21227877|ref|NP_633799.1| - 0.0085 16.0 0.1 0.019 14.9 0.0 1.5 2 0 0 2 2 1 1 PRMT5 arginine-N-methyltransferase Methyltransf_12 PF08242.12 gi|21227877|ref|NP_633799.1| - 0.0097 16.6 0.0 0.021 15.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21227877|ref|NP_633799.1| - 0.018 14.8 0.1 0.037 13.8 0.0 1.5 2 0 0 2 2 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|21227877|ref|NP_633799.1| - 0.02 15.0 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase N6_N4_Mtase PF01555.18 gi|21227877|ref|NP_633799.1| - 0.024 14.4 0.0 0.041 13.6 0.0 1.3 1 0 0 1 1 1 0 DNA methylase DUF43 PF01861.16 gi|21227877|ref|NP_633799.1| - 0.043 13.0 0.0 0.11 11.7 0.0 1.7 1 1 1 2 2 2 0 Branched-chain polyamine synthase A C-terminal domain DNA_methylase PF00145.17 gi|21227877|ref|NP_633799.1| - 0.13 11.6 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Ubie_methyltran PF01209.18 gi|21227877|ref|NP_633799.1| - 0.17 11.2 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family AhpC-TSA PF00578.21 gi|21227878|ref|NP_633800.1| - 2.7e-27 95.1 0.0 3.2e-27 94.9 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|21227878|ref|NP_633800.1| - 1e-15 57.8 0.0 1.2e-15 57.5 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|21227878|ref|NP_633800.1| - 0.0012 18.8 0.0 0.0017 18.3 0.0 1.2 1 0 0 1 1 1 1 SCO1/SenC MASE3 PF17159.4 gi|21227879|ref|NP_633801.1| - 2.4e-81 272.7 21.5 3.1e-81 272.3 21.5 1.1 1 0 0 1 1 1 1 Membrane-associated sensor domain HisKA_2 PF07568.12 gi|21227879|ref|NP_633801.1| - 9.7e-33 112.1 1.2 3.3e-32 110.4 1.2 2.0 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.12 gi|21227879|ref|NP_633801.1| - 2.8e-22 78.8 0.2 9.2e-21 73.9 0.1 2.3 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.26 gi|21227879|ref|NP_633801.1| - 3.5e-09 37.2 0.0 9e-09 35.8 0.0 1.7 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|21227879|ref|NP_633801.1| - 9e-06 25.9 0.4 4.9e-05 23.5 0.1 2.4 2 1 1 3 3 3 1 PAS domain HWE_HK PF07536.14 gi|21227879|ref|NP_633801.1| - 0.00012 22.7 0.3 0.00032 21.4 0.3 1.8 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|21227879|ref|NP_633801.1| - 0.0029 17.5 0.0 0.0055 16.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS PF00989.25 gi|21227879|ref|NP_633801.1| - 0.057 13.4 0.1 0.15 12.0 0.1 1.8 1 0 0 1 1 1 0 PAS fold DUF4482 PF14818.6 gi|21227879|ref|NP_633801.1| - 2.2 9.2 4.5 0.38 11.6 0.4 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4482) Cation_efflux PF01545.21 gi|21227880|ref|NP_633802.1| - 3.6e-44 150.9 12.2 4.4e-44 150.6 12.2 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|21227880|ref|NP_633802.1| - 4.2e-23 81.3 0.3 6.6e-23 80.6 0.3 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Lipoprotein_19 PF13617.6 gi|21227880|ref|NP_633802.1| - 0.47 10.3 2.2 0.96 9.3 2.2 1.5 1 0 0 1 1 1 0 YnbE-like lipoprotein Hydrolase_4 PF12146.8 gi|21227881|ref|NP_633803.1| - 9.7e-09 34.8 0.2 0.0025 17.1 0.1 2.8 1 1 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 gi|21227881|ref|NP_633803.1| - 1.9e-06 27.6 0.0 2.2e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 gi|21227881|ref|NP_633803.1| - 0.00026 21.0 0.0 0.0017 18.3 0.0 1.9 1 1 1 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_1 PF00561.20 gi|21227881|ref|NP_633803.1| - 0.00038 20.2 0.7 0.048 13.3 0.4 2.9 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|21227881|ref|NP_633803.1| - 0.0011 19.6 0.1 1.1 9.8 0.0 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 gi|21227881|ref|NP_633803.1| - 0.048 13.2 0.1 0.073 12.7 0.1 1.3 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_2 PF02230.16 gi|21227881|ref|NP_633803.1| - 0.055 13.3 0.0 5.7 6.7 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.21 gi|21227881|ref|NP_633803.1| - 0.056 12.9 0.1 7.4 6.0 0.0 2.4 1 1 1 2 2 2 0 Prolyl oligopeptidase family Glyoxalase_5 PF14696.6 gi|21227881|ref|NP_633803.1| - 0.15 12.2 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Pribosyltran PF00156.27 gi|21227882|ref|NP_633804.1| - 1.9e-25 89.3 0.1 2.5e-25 88.8 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|21227882|ref|NP_633804.1| - 0.0011 18.5 0.0 0.0022 17.5 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase PALP PF00291.25 gi|21227882|ref|NP_633804.1| - 0.0023 17.4 0.0 0.015 14.8 0.0 1.9 2 0 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme UPRTase PF14681.6 gi|21227882|ref|NP_633804.1| - 0.0025 17.3 0.1 0.0039 16.7 0.1 1.6 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase MASE3 PF17159.4 gi|21227883|ref|NP_633805.1| - 3.9e-86 288.3 20.2 5e-86 288.0 20.2 1.1 1 0 0 1 1 1 1 Membrane-associated sensor domain HisKA_2 PF07568.12 gi|21227883|ref|NP_633805.1| - 1.1e-31 108.7 0.2 2.1e-31 107.8 0.2 1.5 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.12 gi|21227883|ref|NP_633805.1| - 8.3e-13 48.4 0.0 1.9e-12 47.3 0.0 1.6 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|21227883|ref|NP_633805.1| - 5.2e-08 33.4 0.0 1.2e-07 32.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|21227883|ref|NP_633805.1| - 2.3e-05 24.6 0.2 0.0001 22.5 0.0 2.2 3 0 0 3 3 3 1 PAS domain HWE_HK PF07536.14 gi|21227883|ref|NP_633805.1| - 0.00083 20.0 0.1 0.0016 19.1 0.1 1.5 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|21227883|ref|NP_633805.1| - 0.002 18.1 0.0 0.0042 17.0 0.0 1.5 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain SPOB_a PF14689.6 gi|21227883|ref|NP_633805.1| - 0.1 12.3 0.0 0.22 11.2 0.0 1.6 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain Glt_symporter PF03616.14 gi|21227884|ref|NP_633806.1| - 3.1e-09 36.0 15.0 6.7e-07 28.3 7.7 2.4 2 1 0 2 2 2 2 Sodium/glutamate symporter DUF2795 PF11387.8 gi|21227885|ref|NP_633807.1| - 1.4e-12 47.6 0.3 2.5e-12 46.8 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2795) OKR_DC_1_N PF03709.15 gi|21227885|ref|NP_633807.1| - 0.037 14.3 0.0 0.054 13.8 0.0 1.3 1 1 1 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain DUF4396 PF14342.6 gi|21227886|ref|NP_633808.1| - 1.4e-14 54.6 24.1 1.4e-14 54.6 24.1 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4396) CW_binding_2 PF04122.12 gi|21227887|ref|NP_633809.1| - 0.022 15.4 0.0 0.092 13.4 0.0 2.1 3 0 0 3 3 3 0 Putative cell wall binding repeat 2 DDE_Tnp_IS66 PF03050.14 gi|21227889|ref|NP_633811.1| - 1.4e-74 251.1 0.0 1.6e-74 250.9 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21227889|ref|NP_633811.1| - 2.4e-10 40.6 4.9 7e-10 39.2 4.9 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21227889|ref|NP_633811.1| - 1.5e-05 25.2 5.1 0.027 14.7 0.3 3.0 2 1 1 3 3 3 2 DDE domain zf-RING_7 PF02591.15 gi|21227889|ref|NP_633811.1| - 0.031 14.5 0.1 0.031 14.5 0.1 2.0 2 0 0 2 2 1 0 C4-type zinc ribbon domain DZR PF12773.7 gi|21227889|ref|NP_633811.1| - 0.041 13.9 1.7 0.18 11.8 0.9 2.5 2 0 0 2 2 2 0 Double zinc ribbon Lar_restr_allev PF14354.6 gi|21227889|ref|NP_633811.1| - 0.074 13.4 0.2 0.074 13.4 0.2 3.0 3 0 0 3 3 3 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.6 gi|21227889|ref|NP_633811.1| - 0.11 12.2 5.8 2.9 7.7 0.2 2.8 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21227889|ref|NP_633811.1| - 0.12 12.5 3.6 2.1 8.6 3.6 2.8 1 1 0 1 1 1 0 Zinc ribbon domain DUF725 PF05267.12 gi|21227889|ref|NP_633811.1| - 0.16 12.0 2.5 0.47 10.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF725) zf-RING_5 PF14634.6 gi|21227889|ref|NP_633811.1| - 0.98 9.4 0.0 0.98 9.4 0.0 3.3 3 1 0 3 3 3 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21227889|ref|NP_633811.1| - 1 10.1 6.6 0.17 12.7 1.0 2.4 2 1 0 2 2 2 0 zinc-ribbon family Mut7-C PF01927.16 gi|21227889|ref|NP_633811.1| - 1.6 8.8 5.5 0.41 10.8 2.0 1.8 2 0 0 2 2 2 0 Mut7-C RNAse domain zf-ribbon_3 PF13248.6 gi|21227889|ref|NP_633811.1| - 5.9 6.4 8.0 3.9 7.0 0.2 3.0 3 0 0 3 3 3 0 zinc-ribbon domain AIM24 PF01987.17 gi|21227890|ref|NP_633812.1| - 5.7e-33 114.4 0.4 6.7e-33 114.2 0.4 1.1 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DUF1724 PF08350.10 gi|21227892|ref|NP_633814.1| - 4e-18 65.3 0.0 8.5e-18 64.2 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21227892|ref|NP_633814.1| - 6.2e-05 22.8 1.2 0.00013 21.7 1.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21227892|ref|NP_633814.1| - 0.0043 17.1 0.1 0.0074 16.3 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|21227892|ref|NP_633814.1| - 0.017 15.0 0.2 0.043 13.8 0.2 1.7 1 0 0 1 1 1 0 HTH domain TackOD1 PF18551.1 gi|21227893|ref|NP_633815.1| - 0.0044 16.7 5.8 0.0086 15.8 5.6 1.6 1 1 0 1 1 1 1 Thaumarchaeal output domain 1 RecR PF02132.15 gi|21227893|ref|NP_633815.1| - 0.019 14.5 0.9 3 7.5 0.7 2.4 2 0 0 2 2 2 0 RecR protein zf-RING_4 PF14570.6 gi|21227893|ref|NP_633815.1| - 0.25 11.2 9.1 0.098 12.5 2.4 3.0 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain zf-UDP PF14569.6 gi|21227893|ref|NP_633815.1| - 2.6 8.2 8.3 0.16 12.1 2.2 2.0 2 0 0 2 2 2 0 Zinc-binding RING-finger DnaJ_CXXCXGXG PF00684.19 gi|21227894|ref|NP_633816.1| - 7.6e-07 29.4 15.8 1.8e-06 28.2 15.9 1.6 1 1 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|21227894|ref|NP_633816.1| - 0.00011 22.0 17.3 0.017 15.0 5.8 2.2 1 1 1 2 2 2 2 Tryptophan RNA-binding attenuator protein inhibitory protein DZR PF12773.7 gi|21227894|ref|NP_633816.1| - 0.0028 17.7 9.5 0.0066 16.4 9.6 1.5 1 1 1 2 2 2 2 Double zinc ribbon DUF5351 PF17302.2 gi|21227894|ref|NP_633816.1| - 0.0035 17.5 19.6 0.76 10.0 0.1 4.1 4 0 0 4 4 4 3 Family of unknown function (DUF5351) Zn-ribbon_8 PF09723.10 gi|21227894|ref|NP_633816.1| - 0.026 14.6 0.6 0.026 14.6 0.6 2.8 2 1 1 3 3 3 0 Zinc ribbon domain HypA PF01155.19 gi|21227894|ref|NP_633816.1| - 0.88 9.6 7.7 1.6 8.8 0.6 2.1 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-H2C2_2 PF13465.6 gi|21227894|ref|NP_633816.1| - 4 8.0 7.2 15 6.2 0.0 3.5 4 0 0 4 4 4 0 Zinc-finger double domain PhnA_Zn_Ribbon PF08274.12 gi|21227894|ref|NP_633816.1| - 5.7 7.0 10.7 2.6 8.1 1.3 3.1 3 1 0 3 3 3 0 PhnA Zinc-Ribbon PRC PF05239.16 gi|21227895|ref|NP_633817.1| - 5.6e-20 71.2 0.0 6.8e-20 70.9 0.0 1.1 1 0 0 1 1 1 1 PRC-barrel domain PRC PF05239.16 gi|21227896|ref|NP_633818.1| - 1.7e-78 258.7 3.6 1.1e-18 67.0 0.0 4.3 4 0 0 4 4 4 4 PRC-barrel domain DUF362 PF04015.12 gi|21227897|ref|NP_633819.1| - 3e-51 174.6 0.0 4e-51 174.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|21227897|ref|NP_633819.1| - 5.5e-08 32.3 12.4 6.6e-05 22.5 4.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21227897|ref|NP_633819.1| - 1.5e-05 24.7 15.3 0.0061 16.6 3.4 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21227897|ref|NP_633819.1| - 2.6e-05 24.3 11.6 5.2e-05 23.3 11.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227897|ref|NP_633819.1| - 0.00016 22.2 13.1 0.00038 21.0 13.1 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227897|ref|NP_633819.1| - 0.00077 19.6 14.1 0.0015 18.7 14.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21227897|ref|NP_633819.1| - 0.0062 17.3 4.0 0.29 11.9 0.3 2.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_10 PF13237.6 gi|21227897|ref|NP_633819.1| - 0.009 16.1 18.9 0.019 15.1 17.1 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21227897|ref|NP_633819.1| - 0.0092 16.0 14.9 0.015 15.3 2.2 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Lar_N PF09861.9 gi|21227897|ref|NP_633819.1| - 0.13 11.4 0.0 0.24 10.5 0.0 1.3 1 0 0 1 1 1 0 Lactate racemase N-terminal domain Fer4_13 PF13370.6 gi|21227897|ref|NP_633819.1| - 0.71 10.5 14.2 1.5 9.5 4.4 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|21227897|ref|NP_633819.1| - 1.2 9.8 16.6 5.5 7.8 3.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21227897|ref|NP_633819.1| - 1.9 9.0 20.7 22 5.6 6.1 2.6 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227897|ref|NP_633819.1| - 4.3 8.4 15.2 11 7.0 2.6 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain HTH_5 PF01022.20 gi|21227898|ref|NP_633820.1| - 2.9e-07 30.2 0.1 5.7e-07 29.3 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21227898|ref|NP_633820.1| - 8.9e-05 22.5 0.1 0.00018 21.5 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|21227898|ref|NP_633820.1| - 9.8e-05 21.8 1.2 0.0003 20.3 0.3 2.3 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|21227898|ref|NP_633820.1| - 0.0021 17.9 0.2 0.0052 16.7 0.2 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|21227898|ref|NP_633820.1| - 0.0057 16.5 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|21227898|ref|NP_633820.1| - 0.0079 16.0 0.4 0.019 14.8 0.4 1.6 1 0 0 1 1 1 1 TFIIE alpha subunit z-alpha PF02295.17 gi|21227898|ref|NP_633820.1| - 0.011 15.7 2.9 0.055 13.5 0.5 2.3 2 0 0 2 2 2 0 Adenosine deaminase z-alpha domain RP-C PF03428.13 gi|21227898|ref|NP_633820.1| - 0.014 15.1 0.1 0.032 13.9 0.1 1.5 1 1 0 1 1 1 0 Replication protein C N-terminal domain DUF2250 PF10007.9 gi|21227898|ref|NP_633820.1| - 0.031 14.4 0.3 0.055 13.6 0.3 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Mga PF05043.13 gi|21227898|ref|NP_633820.1| - 0.038 14.6 0.0 0.076 13.6 0.0 1.6 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21227898|ref|NP_633820.1| - 0.044 13.8 0.1 0.08 12.9 0.1 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|21227898|ref|NP_633820.1| - 0.081 13.3 0.1 0.14 12.5 0.1 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_36 PF13730.6 gi|21227898|ref|NP_633820.1| - 0.11 12.5 0.1 0.25 11.3 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain BST2 PF16716.5 gi|21227898|ref|NP_633820.1| - 0.11 13.1 0.1 0.72 10.5 0.0 2.0 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 MarR_2 PF12802.7 gi|21227898|ref|NP_633820.1| - 0.13 12.2 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 MarR family Cpn10 PF00166.21 gi|21227899|ref|NP_633821.1| - 2.4e-26 91.6 1.3 2.7e-26 91.5 1.3 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Cpn60_TCP1 PF00118.24 gi|21227900|ref|NP_633822.1| - 4.9e-101 338.8 19.9 1e-100 337.7 19.9 1.5 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family GTP-bdg_M PF16360.5 gi|21227900|ref|NP_633822.1| - 0.029 15.0 0.2 0.066 13.8 0.2 1.5 1 0 0 1 1 1 0 GTP-binding GTPase Middle Region ImmE5 PF11480.8 gi|21227900|ref|NP_633822.1| - 0.031 14.7 0.1 0.1 13.1 0.1 1.9 1 0 0 1 1 1 0 Colicin-E5 Imm protein RNase_H PF00075.24 gi|21227901|ref|NP_633823.1| - 0.00023 21.4 0.0 0.00034 20.8 0.0 1.3 1 0 0 1 1 1 1 RNase H Vut_1 PF02592.15 gi|21227902|ref|NP_633824.1| - 8.7e-49 165.7 5.0 1.1e-48 165.3 5.0 1.1 1 0 0 1 1 1 1 Putative vitamin uptake transporter MAS20 PF02064.15 gi|21227903|ref|NP_633825.1| - 0.023 14.8 0.9 0.053 13.6 0.9 1.5 1 0 0 1 1 1 0 MAS20 protein import receptor BCS1_N PF08740.11 gi|21227903|ref|NP_633825.1| - 0.19 11.7 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 BCS1 N terminal Aminotran_1_2 PF00155.21 gi|21227904|ref|NP_633826.1| - 1.2e-62 212.2 0.0 1.3e-62 212.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|21227904|ref|NP_633826.1| - 9.7e-11 41.6 0.0 1.5e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|21227904|ref|NP_633826.1| - 1.1e-07 30.7 0.0 1.7e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|21227904|ref|NP_633826.1| - 1.1e-06 28.2 0.0 1.6e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|21227904|ref|NP_633826.1| - 7.3e-06 25.2 0.0 1.3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_3 PF00202.21 gi|21227904|ref|NP_633826.1| - 0.0023 16.6 0.0 0.0033 16.1 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-III OKR_DC_1 PF01276.20 gi|21227904|ref|NP_633826.1| - 0.014 14.1 0.0 0.02 13.7 0.0 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Aminotran_MocR PF12897.7 gi|21227904|ref|NP_633826.1| - 0.075 11.8 0.0 0.28 9.9 0.0 1.8 1 1 0 1 1 1 0 Alanine-glyoxylate amino-transferase Rubrerythrin PF02915.17 gi|21227906|ref|NP_633828.1| - 3.7e-23 82.5 11.4 1.2e-21 77.6 11.4 2.1 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|21227906|ref|NP_633828.1| - 0.0024 17.8 4.6 0.0067 16.4 2.4 2.4 1 1 1 2 2 2 1 Ferritin-like domain Zn-ribbon_8 PF09723.10 gi|21227906|ref|NP_633828.1| - 0.012 15.7 1.4 0.038 14.1 1.4 1.8 1 0 0 1 1 1 0 Zinc ribbon domain zf-RING_4 PF14570.6 gi|21227906|ref|NP_633828.1| - 0.058 13.2 0.9 0.11 12.3 0.9 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Ogr_Delta PF04606.12 gi|21227906|ref|NP_633828.1| - 0.062 13.3 1.6 6.5 6.8 0.2 2.5 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger DZR PF12773.7 gi|21227906|ref|NP_633828.1| - 0.078 13.0 0.4 0.12 12.4 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|21227906|ref|NP_633828.1| - 0.087 13.6 0.3 0.14 12.9 0.3 1.4 1 0 0 1 1 1 0 zinc-ribbon family zf-C3HC4_3 PF13920.6 gi|21227906|ref|NP_633828.1| - 0.11 12.3 0.2 0.18 11.7 0.2 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RecR PF02132.15 gi|21227906|ref|NP_633828.1| - 0.2 11.2 1.0 0.47 10.1 1.0 1.6 1 0 0 1 1 1 0 RecR protein Rubredoxin_2 PF18073.1 gi|21227906|ref|NP_633828.1| - 0.34 10.7 2.0 0.85 9.4 2.0 1.6 1 1 0 1 1 1 0 Rubredoxin metal binding domain PHP_C PF13263.6 gi|21227907|ref|NP_633829.1| - 0.0022 17.7 0.0 0.0058 16.4 0.0 1.7 1 0 0 1 1 1 1 PHP-associated PHP PF02811.19 gi|21227907|ref|NP_633829.1| - 0.014 15.7 0.1 0.032 14.5 0.0 1.6 2 0 0 2 2 2 0 PHP domain zinc_ribbon_4 PF13717.6 gi|21227907|ref|NP_633829.1| - 0.087 12.8 1.2 0.23 11.4 1.2 1.8 1 0 0 1 1 1 0 zinc-ribbon domain PAC2 PF09754.9 gi|21227908|ref|NP_633830.1| - 2.6e-51 174.7 0.0 2.9e-51 174.5 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Nop10p PF04135.12 gi|298205309|ref|YP_003717787.1| - 1.1e-24 86.2 1.2 1.2e-24 86.1 1.2 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|298205309|ref|YP_003717787.1| - 2.8e-05 23.6 0.9 3.7e-05 23.2 0.9 1.2 1 0 0 1 1 1 1 RecR protein PolC_DP2 PF03833.13 gi|298205309|ref|YP_003717787.1| - 0.00092 17.2 0.2 0.00092 17.2 0.2 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 DUF35_N PF12172.8 gi|298205309|ref|YP_003717787.1| - 0.0044 16.9 3.9 0.045 13.6 3.9 2.1 1 1 1 2 2 2 2 Rubredoxin-like zinc ribbon domain (DUF35_N) NRDD PF13597.6 gi|298205309|ref|YP_003717787.1| - 0.0061 15.4 0.6 0.0061 15.4 0.6 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Ribosomal_L32p PF01783.23 gi|298205309|ref|YP_003717787.1| - 0.013 15.7 2.3 2.3 8.5 0.1 2.2 1 1 1 2 2 2 0 Ribosomal L32p protein family zf-ribbon_3 PF13248.6 gi|298205309|ref|YP_003717787.1| - 0.036 13.5 3.8 1 8.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-FPG_IleRS PF06827.14 gi|298205309|ref|YP_003717787.1| - 0.072 13.0 7.3 0.85 9.5 0.9 2.2 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS HalOD2 PF18547.1 gi|298205309|ref|YP_003717787.1| - 0.12 12.4 1.1 8.9 6.3 0.0 2.1 1 1 1 2 2 2 0 Halobacterial output domain 2 TF_Zn_Ribbon PF08271.12 gi|298205309|ref|YP_003717787.1| - 0.12 11.9 6.7 3.2 7.3 0.9 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding HypA PF01155.19 gi|298205309|ref|YP_003717787.1| - 0.18 11.8 1.0 0.2 11.7 1.0 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|298205309|ref|YP_003717787.1| - 0.3 11.3 4.6 2.2 8.5 4.6 2.0 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|298205309|ref|YP_003717787.1| - 1 9.2 7.8 8.1 6.3 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-RRN7 PF11781.8 gi|298205309|ref|YP_003717787.1| - 1.2 8.9 5.8 0.7 9.6 0.6 2.1 1 1 1 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 EIF_2_alpha PF07541.12 gi|21227909|ref|NP_633831.1| - 1.9e-23 82.8 0.0 3.1e-23 82.1 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|21227909|ref|NP_633831.1| - 6.7e-14 52.0 0.3 1.8e-13 50.6 0.3 1.7 1 0 0 1 1 1 1 S1 RNA binding domain Ribosomal_S27e PF01667.17 gi|21227910|ref|NP_633832.1| - 4.8e-25 87.0 1.0 5.3e-25 86.9 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 zf-C2H2_12 PF18658.1 gi|21227910|ref|NP_633832.1| - 0.0019 17.7 0.2 0.0035 16.9 0.0 1.5 1 1 1 2 2 2 1 Zinc-finger C2H2-type Zn_Tnp_IS91 PF14319.6 gi|21227910|ref|NP_633832.1| - 0.0079 16.2 0.2 0.0083 16.1 0.2 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain zf-RING_10 PF16685.5 gi|21227910|ref|NP_633832.1| - 0.018 15.2 0.2 0.17 12.0 0.0 2.0 2 0 0 2 2 2 0 zinc RING finger of MSL2 HypA PF01155.19 gi|21227910|ref|NP_633832.1| - 0.023 14.7 0.3 0.026 14.5 0.3 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FYVE PF01363.21 gi|21227910|ref|NP_633832.1| - 0.026 14.6 0.3 0.029 14.5 0.3 1.2 1 0 0 1 1 1 0 FYVE zinc finger zf-BED PF02892.15 gi|21227910|ref|NP_633832.1| - 0.034 14.2 0.6 1.2 9.2 0.0 2.1 2 0 0 2 2 2 0 BED zinc finger zinc_ribbon_6 PF14599.6 gi|21227910|ref|NP_633832.1| - 0.099 12.7 3.0 0.37 10.8 2.9 2.0 2 1 1 3 3 3 0 Zinc-ribbon Ribosomal_L44 PF00935.19 gi|21227911|ref|NP_633833.1| - 1.5e-25 89.5 7.8 1.9e-25 89.1 7.8 1.1 1 0 0 1 1 1 1 Ribosomal protein L44 CENP-T_C PF15511.6 gi|21227912|ref|NP_633834.1| - 0.07 13.2 0.0 7.1 6.8 0.0 2.6 2 1 0 2 2 2 0 Centromere kinetochore component CENP-T histone fold Phasin PF05597.11 gi|21227912|ref|NP_633834.1| - 0.087 12.8 0.2 0.15 12.1 0.2 1.4 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DNA_primase_S PF01896.19 gi|21227913|ref|NP_633835.1| - 5e-21 75.5 0.0 1e-20 74.5 0.0 1.5 1 0 0 1 1 1 1 DNA primase small subunit FGE-sulfatase PF03781.16 gi|21227914|ref|NP_633836.1| - 2.3e-54 184.7 10.5 2.5e-53 181.3 10.5 1.9 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 FbpA PF05833.11 gi|21227915|ref|NP_633837.1| - 1.3e-101 340.6 0.1 1.6e-101 340.3 0.1 1.0 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|21227916|ref|NP_633838.1| - 2.7e-26 92.3 0.0 5.1e-26 91.5 0.0 1.5 1 0 0 1 1 1 1 NFACT protein RNA binding domain FbpA PF05833.11 gi|21227916|ref|NP_633838.1| - 8e-05 21.6 5.8 0.00011 21.1 5.8 1.2 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_2 PF18297.1 gi|21227916|ref|NP_633838.1| - 0.00042 20.5 0.2 0.0027 17.9 0.0 2.3 3 0 0 3 3 3 1 NFACT protein RNA binding domain eRF1_1 PF03463.15 gi|21227917|ref|NP_633839.1| - 1.3e-28 99.6 0.6 1.9e-28 99.0 0.6 1.3 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|21227917|ref|NP_633839.1| - 9.9e-24 84.0 0.8 3e-23 82.5 0.3 2.1 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|21227917|ref|NP_633839.1| - 6.8e-11 42.6 0.0 3.4e-10 40.4 0.0 2.0 1 1 0 1 1 1 1 eRF1 domain 2 S-layer PF07752.11 gi|21227918|ref|NP_633840.1| - 1.7e-62 210.8 5.7 2.1e-62 210.5 5.7 1.1 1 0 0 1 1 1 1 S-layer protein PGF-CTERM PF18204.1 gi|21227918|ref|NP_633840.1| - 0.95 9.5 2.6 0.42 10.6 0.2 1.7 2 0 0 2 2 2 0 PGF-CTERM motif DUF1614 PF07758.11 gi|21227919|ref|NP_633841.1| - 2e-57 193.9 12.9 3.2e-57 193.2 12.9 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1614) DisA_N PF02457.16 gi|21227920|ref|NP_633842.1| - 6.7e-21 74.1 4.5 3.1e-20 71.9 0.3 2.8 3 0 0 3 3 3 2 DisA bacterial checkpoint controller nucleotide-binding MULE PF10551.9 gi|21227921|ref|NP_633843.1| - 0.00039 20.8 0.0 0.00093 19.6 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|21227921|ref|NP_633843.1| - 0.00062 19.3 0.2 0.0064 16.0 0.2 2.0 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.18 gi|21227921|ref|NP_633843.1| - 0.031 14.0 1.5 0.045 13.5 0.7 1.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family LigT_PEase PF02834.16 gi|21227922|ref|NP_633844.1| - 4e-30 103.9 0.0 3.8e-16 59.0 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|21227922|ref|NP_633844.1| - 5e-13 49.2 0.0 6e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|21227922|ref|NP_633844.1| - 6.7e-09 35.9 0.0 9.3e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain Corona_NS2A PF05213.12 gi|21227922|ref|NP_633844.1| - 0.0067 15.8 0.0 0.0085 15.5 0.0 1.1 1 0 0 1 1 1 1 Coronavirus NS2A protein AAA_25 PF13481.6 gi|21227922|ref|NP_633844.1| - 0.057 13.0 0.0 0.08 12.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain B PF02216.16 gi|21227922|ref|NP_633844.1| - 0.063 13.3 0.2 0.13 12.3 0.2 1.5 1 0 0 1 1 1 0 B domain Rep_fac_C PF08542.11 gi|21227923|ref|NP_633845.1| - 5e-24 84.5 0.1 1.2e-23 83.3 0.1 1.7 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|21227923|ref|NP_633845.1| - 3.4e-18 66.3 0.0 7.1e-18 65.3 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|21227923|ref|NP_633845.1| - 1.5e-15 57.4 0.0 9e-11 41.8 0.0 2.2 1 1 1 2 2 2 2 DNA polymerase III, delta subunit AAA_16 PF13191.6 gi|21227923|ref|NP_633845.1| - 1.4e-07 32.1 0.0 0.00021 21.7 0.0 2.5 1 1 1 2 2 2 2 AAA ATPase domain RuvB_N PF05496.12 gi|21227923|ref|NP_633845.1| - 4.1e-07 29.9 0.0 1.1e-05 25.2 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 gi|21227923|ref|NP_633845.1| - 7e-06 26.1 0.0 1.4e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_3 PF07726.11 gi|21227923|ref|NP_633845.1| - 3e-05 23.9 0.0 7.9e-05 22.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_assoc_2 PF16193.5 gi|21227923|ref|NP_633845.1| - 9.6e-05 22.7 0.0 0.00019 21.7 0.0 1.6 1 0 0 1 1 1 1 AAA C-terminal domain Mg_chelatase PF01078.21 gi|21227923|ref|NP_633845.1| - 0.00011 21.7 0.0 0.015 14.7 0.0 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 gi|21227923|ref|NP_633845.1| - 0.00029 20.9 0.0 0.00056 19.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|21227923|ref|NP_633845.1| - 0.00059 20.1 0.1 2.3 8.5 0.0 2.9 2 1 0 3 3 3 2 AAA domain TIP49 PF06068.13 gi|21227923|ref|NP_633845.1| - 0.0012 18.2 0.0 0.0054 16.0 0.0 1.9 1 1 1 2 2 2 1 TIP49 P-loop domain DNA_pol3_delta PF06144.13 gi|21227923|ref|NP_633845.1| - 0.0013 18.6 0.0 0.0054 16.5 0.0 1.9 2 0 0 2 2 2 1 DNA polymerase III, delta subunit AAA_5 PF07728.14 gi|21227923|ref|NP_633845.1| - 0.0038 17.2 0.0 0.017 15.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) ResIII PF04851.15 gi|21227923|ref|NP_633845.1| - 0.0041 17.1 0.0 0.1 12.6 0.0 2.2 1 1 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_2 PF07724.14 gi|21227923|ref|NP_633845.1| - 0.018 15.2 0.0 0.045 13.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_24 PF13479.6 gi|21227923|ref|NP_633845.1| - 0.028 14.1 0.0 0.073 12.8 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|21227923|ref|NP_633845.1| - 0.031 13.8 0.0 0.051 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 gi|21227923|ref|NP_633845.1| - 0.045 13.5 0.0 5.6 6.7 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|21227923|ref|NP_633845.1| - 0.054 13.2 0.0 0.13 12.0 0.0 1.8 1 0 0 1 1 1 0 IstB-like ATP binding protein SNF2_N PF00176.23 gi|21227923|ref|NP_633845.1| - 0.067 11.9 0.0 0.16 10.7 0.0 1.6 1 1 1 2 2 2 0 SNF2 family N-terminal domain AAA_18 PF13238.6 gi|21227923|ref|NP_633845.1| - 0.07 13.7 0.0 0.21 12.1 0.0 1.9 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 gi|21227923|ref|NP_633845.1| - 0.11 11.9 0.0 0.28 10.5 0.0 1.6 2 0 0 2 2 2 0 Bacterial TniB protein Viral_helicase1 PF01443.18 gi|21227923|ref|NP_633845.1| - 0.15 11.7 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Sm_multidrug_ex PF06695.11 gi|21227925|ref|NP_633847.1| - 9.7e-41 139.2 1.9 1.6e-40 138.5 1.9 1.3 1 0 0 1 1 1 1 Putative small multi-drug export protein Fer4 PF00037.27 gi|21227926|ref|NP_633848.1| - 1.8e-15 56.0 15.0 7.5e-09 35.0 3.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21227926|ref|NP_633848.1| - 7.2e-13 48.4 7.7 4.1e-06 26.8 1.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21227926|ref|NP_633848.1| - 1.3e-12 47.2 13.5 6.6e-07 29.1 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21227926|ref|NP_633848.1| - 3.4e-12 45.7 10.8 4.3e-06 26.5 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21227926|ref|NP_633848.1| - 5.3e-12 45.7 12.0 3.5e-07 30.3 1.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227926|ref|NP_633848.1| - 6.6e-12 45.8 20.2 1.1e-09 38.8 9.7 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227926|ref|NP_633848.1| - 2.5e-10 40.4 19.5 3.7e-07 30.2 10.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21227926|ref|NP_633848.1| - 1.6e-09 38.1 5.7 0.00021 21.6 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227926|ref|NP_633848.1| - 4.6e-08 33.9 8.7 7.5e-05 23.6 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|21227926|ref|NP_633848.1| - 7.8e-07 29.1 13.6 5.8e-05 23.3 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21227926|ref|NP_633848.1| - 2e-06 28.6 4.8 0.0044 17.8 1.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21227926|ref|NP_633848.1| - 1.3e-05 25.6 21.4 0.00037 21.0 11.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21227926|ref|NP_633848.1| - 6.1e-05 23.7 16.9 0.012 16.5 5.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|21227926|ref|NP_633848.1| - 0.00014 22.3 13.3 0.011 16.2 2.4 2.5 2 1 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|21227926|ref|NP_633848.1| - 0.00041 21.0 6.6 0.12 13.1 0.4 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|21227926|ref|NP_633848.1| - 0.0097 16.1 11.1 0.022 15.0 1.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain zf-C2H2_11 PF16622.5 gi|21227926|ref|NP_633848.1| - 4.9 7.0 11.2 0.78 9.6 2.7 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type CBFD_NFYB_HMF PF00808.23 gi|21227927|ref|NP_633849.1| - 7.7e-16 58.1 0.2 9.2e-16 57.9 0.2 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|21227927|ref|NP_633849.1| - 8.5e-10 39.1 0.1 1e-09 38.8 0.1 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 gi|21227927|ref|NP_633849.1| - 5.5e-07 29.7 0.0 6.4e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold Bromo_TP PF07524.13 gi|21227927|ref|NP_633849.1| - 7.1e-06 25.9 0.0 8.5e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Bromodomain associated TFIID-31kDa PF02291.15 gi|21227927|ref|NP_633849.1| - 1.4e-05 25.2 0.0 1.6e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit CENP-S PF15630.6 gi|21227927|ref|NP_633849.1| - 3.4e-05 24.1 0.0 4e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 CENP-S protein TAF PF02969.17 gi|21227927|ref|NP_633849.1| - 0.0086 16.2 0.1 0.0096 16.1 0.1 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID-18kDa PF02269.16 gi|21227927|ref|NP_633849.1| - 0.029 14.4 0.0 0.031 14.3 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit Peptidase_C39 PF03412.15 gi|21227927|ref|NP_633849.1| - 0.063 13.1 0.1 0.069 13.0 0.1 1.1 1 0 0 1 1 1 0 Peptidase C39 family TFIID_20kDa PF03847.13 gi|21227927|ref|NP_633849.1| - 0.073 13.6 0.0 0.082 13.4 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A PCP_red PF08369.10 gi|21227927|ref|NP_633849.1| - 0.22 11.8 1.9 0.89 9.8 0.5 2.1 2 0 0 2 2 2 0 Proto-chlorophyllide reductase 57 kD subunit Methyltransf_25 PF13649.6 gi|21227928|ref|NP_633850.1| - 7.4e-06 26.6 0.0 1.9e-05 25.3 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21227928|ref|NP_633850.1| - 0.00077 20.1 0.1 0.0024 18.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|21227928|ref|NP_633850.1| - 0.035 13.1 0.0 0.066 12.2 0.0 1.4 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_23 PF13489.6 gi|21227928|ref|NP_633850.1| - 0.04 13.7 0.0 0.073 12.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PYC_OADA PF02436.18 gi|21227929|ref|NP_633851.1| - 1.9e-58 197.5 0.1 3.2e-58 196.8 0.1 1.3 1 0 0 1 1 1 1 Conserved carboxylase domain HMGL-like PF00682.19 gi|21227929|ref|NP_633851.1| - 4.2e-48 164.2 0.0 6.1e-48 163.7 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.22 gi|21227929|ref|NP_633851.1| - 6.1e-17 61.2 2.7 6.1e-17 61.2 2.7 2.1 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|21227929|ref|NP_633851.1| - 1.7e-09 37.4 0.1 6.1e-05 22.8 0.0 2.6 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|21227929|ref|NP_633851.1| - 1.6e-05 25.5 1.8 0.059 14.1 0.1 2.8 3 0 0 3 3 3 2 HlyD family secretion protein RnfC_N PF13375.6 gi|21227929|ref|NP_633851.1| - 0.00011 22.1 0.8 0.00065 19.6 0.4 2.5 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain HlyD_D23 PF16576.5 gi|21227929|ref|NP_633851.1| - 0.00011 21.5 0.3 0.026 13.8 0.0 2.4 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCV_H PF01597.19 gi|21227929|ref|NP_633851.1| - 0.024 14.5 0.6 0.079 12.9 0.6 2.0 1 0 0 1 1 1 0 Glycine cleavage H-protein NQRA PF05896.11 gi|21227929|ref|NP_633851.1| - 0.045 13.2 0.4 0.079 12.4 0.4 1.4 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CPSase_L_D2 PF02786.17 gi|161485671|ref|NP_633852.2| - 3.1e-82 275.1 0.1 5.1e-82 274.5 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|161485671|ref|NP_633852.2| - 1.2e-48 164.3 0.1 1.4e-47 160.8 0.1 2.6 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|161485671|ref|NP_633852.2| - 2.2e-44 150.0 0.0 4e-44 149.1 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 gi|161485671|ref|NP_633852.2| - 5.2e-15 55.5 0.1 1.4e-14 54.1 0.1 1.7 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.11 gi|161485671|ref|NP_633852.2| - 2.3e-09 37.1 0.0 1.9e-08 34.1 0.0 2.1 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp PF02222.22 gi|161485671|ref|NP_633852.2| - 1.3e-08 34.6 0.1 2.5e-08 33.7 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|161485671|ref|NP_633852.2| - 1.5e-07 31.6 0.2 3e-07 30.6 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp domain GARS_A PF01071.19 gi|161485671|ref|NP_633852.2| - 1.2e-05 25.2 0.4 2.5e-05 24.1 0.1 1.8 2 1 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.6 gi|161485671|ref|NP_633852.2| - 0.00043 19.8 0.0 0.0011 18.5 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|161485671|ref|NP_633852.2| - 0.0012 18.6 0.0 0.0041 16.9 0.0 1.9 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Oxidored_nitro PF00148.19 gi|161485671|ref|NP_633852.2| - 0.011 14.5 0.1 0.032 12.9 0.0 1.7 1 1 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase ATP-grasp_4 PF13535.6 gi|161485671|ref|NP_633852.2| - 0.017 14.7 0.0 0.035 13.7 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain PK_C PF02887.16 gi|161485671|ref|NP_633852.2| - 0.032 14.4 2.4 0.91 9.8 0.1 3.4 2 1 1 3 3 3 0 Pyruvate kinase, alpha/beta domain OAD_gamma PF04277.13 gi|161485671|ref|NP_633852.2| - 0.13 12.9 3.1 0.28 11.8 3.1 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Radical_SAM PF04055.21 gi|161485671|ref|NP_633852.2| - 0.16 12.3 0.1 0.75 10.1 0.0 2.2 3 1 0 3 3 2 0 Radical SAM superfamily BPL_LplA_LipB PF03099.19 gi|21227931|ref|NP_633853.1| - 2.7e-19 69.4 0.0 5.7e-19 68.3 0.0 1.5 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.12 gi|21227931|ref|NP_633853.1| - 4.1e-17 61.9 0.6 1.2e-16 60.4 0.1 2.0 2 0 0 2 2 2 1 HTH domain BPL_C PF02237.17 gi|21227931|ref|NP_633853.1| - 5e-10 39.1 0.1 1.5e-09 37.6 0.1 1.8 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain BPL_LplA_LipB_2 PF16917.5 gi|21227931|ref|NP_633853.1| - 2.7e-05 23.8 0.0 3.4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_24 PF13412.6 gi|21227931|ref|NP_633853.1| - 0.00044 19.7 0.0 0.001 18.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding S-layer PF07752.11 gi|21227932|ref|NP_633854.1| - 7.6e-13 48.1 0.0 1e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 S-layer protein TMEM252 PF15664.5 gi|21227932|ref|NP_633854.1| - 0.024 14.4 0.0 0.037 13.7 0.0 1.4 1 0 0 1 1 1 0 Transmembrane protein 252 family DASH_Spc19 PF08287.11 gi|21227933|ref|NP_633855.1| - 0.025 14.5 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Spc19 SlyX PF04102.12 gi|21227933|ref|NP_633855.1| - 0.036 14.7 0.1 0.054 14.1 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.11 gi|21227933|ref|NP_633855.1| - 0.22 11.3 0.4 0.22 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.14 gi|21227934|ref|NP_633856.1| - 2.5e-73 247.0 0.0 2.9e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21227934|ref|NP_633856.1| - 4.8e-10 39.7 6.7 1.3e-09 38.2 6.7 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21227934|ref|NP_633856.1| - 0.00015 22.0 1.1 0.62 10.3 0.0 3.0 2 1 1 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|21227934|ref|NP_633856.1| - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) zf-RING_5 PF14634.6 gi|21227934|ref|NP_633856.1| - 0.34 10.9 7.9 1 9.4 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21227934|ref|NP_633856.1| - 1.2 10.0 7.5 0.17 12.6 2.9 2.0 2 0 0 2 2 2 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|21227934|ref|NP_633856.1| - 1.3 9.7 5.2 31 5.3 0.5 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CENP-F_leu_zip PF10473.9 gi|21227935|ref|NP_633857.1| - 0.00035 20.6 13.0 0.00035 20.6 13.0 2.9 2 1 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Laminin_I PF06008.14 gi|21227935|ref|NP_633857.1| - 0.00039 20.2 31.5 0.047 13.4 8.5 2.3 1 1 1 2 2 2 2 Laminin Domain I DUF3450 PF11932.8 gi|21227935|ref|NP_633857.1| - 0.0012 18.2 4.0 0.0012 18.2 4.0 3.4 1 1 2 3 3 3 1 Protein of unknown function (DUF3450) GAS PF13851.6 gi|21227935|ref|NP_633857.1| - 0.0015 17.9 12.1 0.0015 17.9 12.1 3.3 1 1 2 3 3 3 1 Growth-arrest specific micro-tubule binding Seryl_tRNA_N PF02403.22 gi|21227935|ref|NP_633857.1| - 0.016 15.4 35.0 0.043 14.0 8.3 4.5 1 1 4 5 5 5 0 Seryl-tRNA synthetase N-terminal domain HSBP1 PF06825.12 gi|21227935|ref|NP_633857.1| - 0.017 15.0 6.8 0.96 9.4 0.0 4.5 4 1 0 4 4 4 0 Heat shock factor binding protein 1 DUF1664 PF07889.12 gi|21227935|ref|NP_633857.1| - 0.043 13.9 22.4 3.4 7.7 5.3 4.2 1 1 3 5 5 5 0 Protein of unknown function (DUF1664) DUF948 PF06103.11 gi|21227935|ref|NP_633857.1| - 0.06 13.6 7.9 26 5.2 1.0 4.5 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF1854 PF08909.11 gi|21227935|ref|NP_633857.1| - 0.11 12.3 3.2 0.12 12.2 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1854) Spc7 PF08317.11 gi|21227935|ref|NP_633857.1| - 0.15 10.9 38.1 0.013 14.4 13.6 2.9 1 1 0 2 2 2 0 Spc7 kinetochore protein DUF1192 PF06698.11 gi|21227935|ref|NP_633857.1| - 0.26 11.4 0.2 0.26 11.4 0.2 4.3 6 0 0 6 6 6 0 Protein of unknown function (DUF1192) MAD PF05557.13 gi|21227935|ref|NP_633857.1| - 0.3 9.4 38.9 0.074 11.4 14.4 2.0 1 1 1 2 2 2 0 Mitotic checkpoint protein Sec34 PF04136.15 gi|21227935|ref|NP_633857.1| - 0.31 10.9 22.5 0.16 11.8 0.6 4.0 2 2 2 4 4 4 0 Sec34-like family Atg14 PF10186.9 gi|21227935|ref|NP_633857.1| - 0.35 9.9 40.4 0.35 9.9 15.3 3.0 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 FUSC PF04632.12 gi|21227935|ref|NP_633857.1| - 0.36 9.3 5.3 0.55 8.7 0.4 2.2 1 1 0 2 2 2 0 Fusaric acid resistance protein family HsbA PF12296.8 gi|21227935|ref|NP_633857.1| - 0.39 11.2 5.5 1.1 9.8 0.1 3.5 3 1 0 3 3 3 0 Hydrophobic surface binding protein A FAM76 PF16046.5 gi|21227935|ref|NP_633857.1| - 0.45 9.8 35.2 0.35 10.2 16.2 2.6 1 1 2 3 3 3 0 FAM76 protein Fez1 PF06818.15 gi|21227935|ref|NP_633857.1| - 0.5 10.8 32.8 1.3 9.4 13.2 2.5 1 1 1 2 2 2 0 Fez1 IL5 PF02025.15 gi|21227935|ref|NP_633857.1| - 0.5 10.7 6.8 0.4 11.0 0.6 3.0 2 1 0 3 3 3 0 Interleukin 5 NPV_P10 PF05531.12 gi|21227935|ref|NP_633857.1| - 0.64 10.5 14.5 1 9.8 1.4 4.7 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Filament PF00038.21 gi|21227935|ref|NP_633857.1| - 0.92 9.0 33.3 6.2 6.3 33.1 2.2 1 1 0 1 1 1 0 Intermediate filament protein DUF3037 PF11236.8 gi|21227935|ref|NP_633857.1| - 1.1 9.8 6.5 1.2 9.6 1.0 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF3037) ERM PF00769.19 gi|21227935|ref|NP_633857.1| - 3.6 7.3 34.0 0.29 10.9 9.8 2.1 1 1 1 2 2 2 0 Ezrin/radixin/moesin family YabA PF06156.13 gi|21227935|ref|NP_633857.1| - 3.8 8.2 29.9 4.7 7.9 2.1 4.2 2 2 1 3 3 3 0 Initiation control protein YabA Cep57_CLD_2 PF14197.6 gi|21227935|ref|NP_633857.1| - 4.2 7.5 35.1 0.48 10.6 0.2 6.4 2 2 3 5 5 5 0 Centrosome localisation domain of PPC89 KASH_CCD PF14662.6 gi|21227935|ref|NP_633857.1| - 5.8 6.7 35.4 0.1 12.4 13.0 2.6 1 1 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF4446 PF14584.6 gi|21227935|ref|NP_633857.1| - 6.6 6.7 22.7 0.58 10.1 1.1 4.4 2 2 3 5 5 5 0 Protein of unknown function (DUF4446) V_ATPase_I PF01496.19 gi|21227935|ref|NP_633857.1| - 7.8 4.3 19.0 11 3.8 19.0 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family COG2 PF06148.11 gi|21227935|ref|NP_633857.1| - 9.2 6.4 20.8 3.1 7.9 2.9 4.3 1 1 3 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4201 PF13870.6 gi|21227935|ref|NP_633857.1| - 9.7 5.9 37.7 3.1 7.5 16.1 4.0 1 1 3 4 4 4 0 Domain of unknown function (DUF4201) Spc7 PF08317.11 gi|21227936|ref|NP_633858.1| - 0.023 13.6 22.9 0.32 9.8 9.7 2.1 1 1 0 2 2 2 0 Spc7 kinetochore protein Peptidase_M75 PF09375.10 gi|21227936|ref|NP_633858.1| - 0.044 13.3 3.2 0.31 10.5 0.6 2.0 1 1 0 2 2 2 0 Imelysin IZUMO PF15005.6 gi|21227936|ref|NP_633858.1| - 1.6 9.2 7.9 3.2 8.3 0.6 2.2 1 1 1 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated V_ATPase_I PF01496.19 gi|21227936|ref|NP_633858.1| - 8 4.2 17.7 0.12 10.3 2.9 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family DUF424 PF04242.13 gi|21227937|ref|NP_633859.1| - 4.5e-32 110.2 0.2 5.1e-32 110.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) RNase_PH_C PF03725.15 gi|21227937|ref|NP_633859.1| - 0.54 10.3 3.2 2 8.5 0.3 2.4 2 1 0 2 2 2 0 3' exoribonuclease family, domain 2 MCM PF00493.23 gi|21227938|ref|NP_633860.1| - 5.8e-96 319.9 0.0 8.6e-96 319.4 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|21227938|ref|NP_633860.1| - 7.8e-36 122.7 0.1 1.3e-35 122.0 0.1 1.3 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|21227938|ref|NP_633860.1| - 3.1e-27 94.8 0.9 6.2e-27 93.8 0.2 2.0 2 0 0 2 2 2 1 MCM AAA-lid domain MCM_N PF14551.6 gi|21227938|ref|NP_633860.1| - 7.9e-08 32.8 0.1 3e-07 31.0 0.1 2.0 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 gi|21227938|ref|NP_633860.1| - 2.3e-06 27.2 0.1 0.00018 20.9 0.0 2.3 1 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|21227938|ref|NP_633860.1| - 1.7e-05 24.8 0.0 4.6e-05 23.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|21227938|ref|NP_633860.1| - 0.003 17.4 0.1 0.014 15.2 0.0 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 gi|21227938|ref|NP_633860.1| - 0.11 12.9 0.0 0.37 11.2 0.0 1.9 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|21227938|ref|NP_633860.1| - 0.16 12.2 0.0 10 6.3 0.0 2.9 3 1 0 3 3 3 0 AAA domain tRNA_anti-codon PF01336.25 gi|21227938|ref|NP_633860.1| - 0.17 11.9 0.1 0.79 9.8 0.0 2.1 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain SpoU_methylase PF00588.19 gi|21227939|ref|NP_633861.1| - 1.9e-31 109.1 0.0 2.7e-31 108.7 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family AdoHcyase_NAD PF00670.21 gi|21227939|ref|NP_633861.1| - 0.14 12.2 0.0 0.37 10.8 0.0 1.7 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Fer4 PF00037.27 gi|21227940|ref|NP_633862.1| - 2e-13 49.5 14.3 9.9e-09 34.7 4.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21227940|ref|NP_633862.1| - 5.8e-13 49.2 28.0 1.5e-08 35.1 17.0 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21227940|ref|NP_633862.1| - 2.9e-12 46.1 15.8 1.9e-07 30.9 2.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21227940|ref|NP_633862.1| - 9e-10 38.1 15.1 4.8e-07 29.5 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21227940|ref|NP_633862.1| - 3.6e-09 36.6 15.1 8.8e-08 32.2 15.3 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21227940|ref|NP_633862.1| - 7.3e-09 35.6 11.5 8.9e-09 35.4 11.5 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227940|ref|NP_633862.1| - 1.8e-08 34.4 29.2 4.5e-06 26.7 16.9 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227940|ref|NP_633862.1| - 3.2e-06 27.2 18.2 6.8e-05 23.1 3.8 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|21227940|ref|NP_633862.1| - 3.7e-05 24.4 1.2 3.7e-05 24.4 1.2 2.2 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|21227940|ref|NP_633862.1| - 3.8e-05 24.1 2.8 3.8e-05 24.1 2.8 2.4 1 1 1 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|21227940|ref|NP_633862.1| - 0.00014 22.2 17.1 0.00062 20.2 17.1 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227940|ref|NP_633862.1| - 0.0027 18.6 17.2 0.14 13.1 5.0 2.3 1 1 3 4 4 4 4 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|21227940|ref|NP_633862.1| - 0.0039 17.7 17.3 0.034 14.7 4.6 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21227940|ref|NP_633862.1| - 0.013 16.4 5.9 0.013 16.4 5.9 2.6 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21227940|ref|NP_633862.1| - 0.061 14.2 17.8 0.079 13.8 3.7 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain SPATIAL PF15256.6 gi|21227940|ref|NP_633862.1| - 0.17 12.2 0.0 0.19 12.1 0.0 1.1 1 0 0 1 1 1 0 SPATIAL ETF_QO PF05187.13 gi|21227940|ref|NP_633862.1| - 1.3 9.2 6.5 2.9 8.1 6.4 1.6 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Peptidase_C39_2 PF13529.6 gi|21227941|ref|NP_633863.1| - 1.2e-10 42.1 1.9 1.2e-10 42.1 1.9 1.8 1 1 0 1 1 1 1 Peptidase_C39 like family Peptidase_C1 PF00112.23 gi|21227941|ref|NP_633863.1| - 0.34 11.0 9.8 0.096 12.8 0.9 2.3 2 1 0 2 2 2 0 Papain family cysteine protease Beta_helix PF13229.6 gi|21227942|ref|NP_633864.1| - 3.2e-27 95.3 116.2 1.1e-16 61.1 49.0 3.1 2 1 2 4 4 4 3 Right handed beta helix region NosD PF05048.13 gi|21227942|ref|NP_633864.1| - 8.8e-14 51.3 63.9 8.2e-08 31.8 23.9 2.5 2 1 0 2 2 2 2 Periplasmic copper-binding protein (NosD) NIR_SIR PF01077.22 gi|21227944|ref|NP_633866.1| - 9.3e-30 103.2 0.0 1.4e-29 102.7 0.0 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|21227944|ref|NP_633866.1| - 2e-15 56.4 0.0 3.2e-15 55.7 0.0 1.4 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain PMBR PF09373.10 gi|21227944|ref|NP_633866.1| - 0.014 15.5 0.1 0.038 14.1 0.0 1.8 2 0 0 2 2 2 0 Pseudomurein-binding repeat Nitrate_red_gam PF02665.14 gi|21227945|ref|NP_633867.1| - 8.3e-06 25.5 12.0 2e-05 24.2 1.1 2.5 3 0 0 3 3 3 2 Nitrate reductase gamma subunit CCG PF02754.16 gi|21227946|ref|NP_633868.1| - 1.3e-29 102.2 2.4 5.9e-15 55.2 0.1 3.0 4 0 0 4 4 3 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|21227946|ref|NP_633868.1| - 3.7e-10 40.1 2.8 3.7e-10 40.1 2.8 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21227946|ref|NP_633868.1| - 3.5e-07 30.7 3.3 3.5e-07 30.7 3.3 2.9 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227946|ref|NP_633868.1| - 5.6e-07 29.6 17.7 2.9e-06 27.4 7.5 3.2 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21227946|ref|NP_633868.1| - 5.1e-06 27.0 7.7 5.1e-06 27.0 7.7 2.9 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21227946|ref|NP_633868.1| - 9.8e-06 25.8 3.1 0.018 15.2 0.3 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227946|ref|NP_633868.1| - 1.6e-05 25.8 6.5 1.6e-05 25.8 6.5 2.7 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|21227946|ref|NP_633868.1| - 7.1e-05 22.8 11.6 7.1e-05 22.8 11.6 3.5 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21227946|ref|NP_633868.1| - 0.0001 21.9 13.1 0.0074 16.1 1.7 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21227946|ref|NP_633868.1| - 0.00092 19.2 16.4 0.0034 17.4 1.7 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21227946|ref|NP_633868.1| - 0.0012 18.9 7.9 0.19 11.9 0.5 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21227946|ref|NP_633868.1| - 0.0065 16.5 1.8 0.0065 16.5 1.8 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21227946|ref|NP_633868.1| - 0.016 16.1 15.6 0.03 15.2 3.7 3.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21227946|ref|NP_633868.1| - 0.017 15.9 11.4 0.24 12.3 0.3 3.7 4 0 0 4 4 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21227946|ref|NP_633868.1| - 0.055 14.0 2.4 0.055 14.0 2.4 3.5 4 0 0 4 4 2 0 4Fe-4S binding domain DUF116 PF01976.17 gi|21227947|ref|NP_633869.1| - 1.1e-43 148.4 7.0 1.3e-43 148.2 7.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 ABC2_membrane PF01061.24 gi|21227947|ref|NP_633869.1| - 0.016 14.6 3.6 0.023 14.1 3.6 1.1 1 0 0 1 1 1 0 ABC-2 type transporter EGL-1 PF11430.8 gi|21227947|ref|NP_633869.1| - 0.037 13.9 2.9 0.35 10.8 0.3 2.6 2 0 0 2 2 2 0 Programmed cell death activator EGL-1 HIG_1_N PF04588.13 gi|21227947|ref|NP_633869.1| - 0.12 12.6 0.4 0.28 11.4 0.4 1.6 1 1 0 1 1 1 0 Hypoxia induced protein conserved region ABC2_membrane_3 PF12698.7 gi|21227947|ref|NP_633869.1| - 0.24 10.5 6.1 0.32 10.0 6.1 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF116 PF01976.17 gi|21227948|ref|NP_633870.1| - 3e-42 143.8 0.5 3.7e-42 143.5 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 DUF2897 PF11446.8 gi|21227948|ref|NP_633870.1| - 7.1 6.6 6.1 13 5.7 6.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) NAD_binding_8 PF13450.6 gi|21227949|ref|NP_633871.1| - 1.4e-09 38.0 0.3 5.2e-08 33.0 0.1 3.0 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|21227949|ref|NP_633871.1| - 7.9e-05 21.5 0.5 0.00014 20.7 0.0 1.7 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.27 gi|21227949|ref|NP_633871.1| - 0.00034 21.1 0.0 0.0069 16.9 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|21227949|ref|NP_633871.1| - 0.0004 20.1 1.5 0.019 14.6 0.3 2.6 1 1 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|21227949|ref|NP_633871.1| - 0.00052 19.4 0.0 0.00068 18.9 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|21227949|ref|NP_633871.1| - 0.00086 18.5 0.0 0.0059 15.7 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|21227949|ref|NP_633871.1| - 0.0098 15.2 0.1 0.038 13.2 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|21227949|ref|NP_633871.1| - 0.041 13.2 0.0 0.14 11.4 0.0 1.9 1 1 1 2 2 2 0 Flavin containing amine oxidoreductase GIDA PF01134.22 gi|21227949|ref|NP_633871.1| - 0.052 12.6 0.0 0.086 11.9 0.0 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A SE PF08491.10 gi|21227949|ref|NP_633871.1| - 0.064 12.3 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 Squalene epoxidase AlaDh_PNT_C PF01262.21 gi|21227949|ref|NP_633871.1| - 0.069 12.4 0.0 1.2 8.3 0.0 2.6 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|21227949|ref|NP_633871.1| - 0.083 12.1 0.0 0.14 11.4 0.0 1.4 1 0 0 1 1 1 0 Thi4 family NAD_Gly3P_dh_N PF01210.23 gi|21227949|ref|NP_633871.1| - 0.092 12.7 0.1 0.24 11.4 0.1 1.7 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_oxidored PF12831.7 gi|21227949|ref|NP_633871.1| - 0.14 11.5 0.0 0.25 10.6 0.0 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|21227951|ref|NP_633873.1| - 2.5e-11 43.1 0.0 7.3e-08 31.7 0.0 2.0 1 1 1 2 2 2 2 Tryptophan halogenase FAD_binding_3 PF01494.19 gi|21227951|ref|NP_633873.1| - 2.6e-11 43.4 0.0 6.9e-10 38.7 0.0 2.6 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|21227951|ref|NP_633873.1| - 2.8e-09 36.7 0.8 0.00076 18.8 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|21227951|ref|NP_633873.1| - 1.8e-07 30.8 0.0 2.7e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|21227951|ref|NP_633873.1| - 7.8e-07 28.6 0.0 2.2e-06 27.2 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|21227951|ref|NP_633873.1| - 2.2e-06 26.6 0.1 0.0058 15.4 0.0 2.7 3 0 0 3 3 3 2 HI0933-like protein DAO PF01266.24 gi|21227951|ref|NP_633873.1| - 5.5e-05 22.9 0.1 0.13 11.8 0.1 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|21227951|ref|NP_633873.1| - 0.00034 20.8 0.2 0.012 15.9 0.1 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain PCNA_N PF00705.18 gi|21227951|ref|NP_633873.1| - 0.00038 20.2 0.1 0.0007 19.3 0.1 1.4 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Thi4 PF01946.17 gi|21227951|ref|NP_633873.1| - 0.0018 17.5 0.1 0.0044 16.3 0.1 1.6 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 gi|21227951|ref|NP_633873.1| - 0.002 17.3 0.0 0.062 12.3 0.0 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein GIDA PF01134.22 gi|21227951|ref|NP_633873.1| - 0.0058 15.8 0.0 0.011 14.9 0.0 1.4 1 1 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|21227951|ref|NP_633873.1| - 0.011 14.9 0.1 0.02 14.0 0.1 1.4 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.27 gi|21227951|ref|NP_633873.1| - 0.021 15.4 0.1 5 7.8 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Dus PF01207.17 gi|21227953|ref|NP_633875.1| - 7.1e-15 54.9 0.1 1.5e-14 53.8 0.1 1.5 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|21227953|ref|NP_633875.1| - 2.5e-07 30.4 0.2 6.6e-07 29.0 0.1 1.7 1 1 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.25 gi|21227953|ref|NP_633875.1| - 0.001 18.1 0.4 0.0015 17.6 0.4 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain GST_C_2 PF13410.6 gi|21227953|ref|NP_633875.1| - 0.14 12.2 0.8 11 6.1 0.1 2.7 3 0 0 3 3 3 0 Glutathione S-transferase, C-terminal domain Hydrolase_like PF13242.6 gi|21227953|ref|NP_633875.1| - 0.15 12.1 0.1 0.4 10.8 0.1 1.7 1 0 0 1 1 1 0 HAD-hyrolase-like CitG PF01874.16 gi|21227954|ref|NP_633876.1| - 1.4e-78 264.4 0.0 1.6e-78 264.2 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase DUF447 PF04289.12 gi|21227955|ref|NP_633877.1| - 2.1e-50 170.9 0.0 2.4e-50 170.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Flavoprotein PF02441.19 gi|21227956|ref|NP_633878.1| - 7.8e-16 58.2 0.0 1.3e-15 57.5 0.0 1.3 1 0 0 1 1 1 1 Flavoprotein Fer4 PF00037.27 gi|21227956|ref|NP_633878.1| - 3.8e-08 32.8 12.3 2.2e-07 30.4 2.1 3.2 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21227956|ref|NP_633878.1| - 1.2e-06 29.0 4.3 0.00032 21.2 0.5 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21227956|ref|NP_633878.1| - 4.4e-06 27.5 8.2 0.0008 20.3 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|21227956|ref|NP_633878.1| - 4.3e-05 24.0 2.4 0.013 16.0 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21227956|ref|NP_633878.1| - 0.00015 21.9 11.1 0.00062 19.9 11.7 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21227956|ref|NP_633878.1| - 0.00015 21.8 9.7 0.00024 21.2 9.7 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21227956|ref|NP_633878.1| - 0.00022 21.1 11.2 0.0042 17.1 0.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|21227956|ref|NP_633878.1| - 0.00065 19.8 3.1 0.001 19.1 3.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21227956|ref|NP_633878.1| - 0.00068 19.7 22.8 0.0043 17.1 1.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21227956|ref|NP_633878.1| - 0.0012 18.8 13.6 0.0037 17.3 1.9 2.5 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|21227956|ref|NP_633878.1| - 1.1 10.0 9.9 1.3 9.8 0.2 3.4 3 1 1 4 4 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|21227956|ref|NP_633878.1| - 3.6 8.2 12.4 0.98 10.0 0.6 3.1 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|21227956|ref|NP_633878.1| - 6.3 7.3 12.9 0.24 11.9 0.9 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain ABC_tran PF00005.27 gi|21227957|ref|NP_633879.1| - 3.3e-28 98.9 0.0 4.4e-28 98.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|21227957|ref|NP_633879.1| - 0.00015 21.3 0.0 0.00035 20.1 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|21227957|ref|NP_633879.1| - 0.00028 20.8 1.3 0.0013 18.6 0.2 2.0 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system GW PF13457.6 gi|21227957|ref|NP_633879.1| - 0.016 15.8 0.0 3.3 8.4 0.0 2.2 2 0 0 2 2 2 0 GW (Gly-Tryp) dipeptide domain AAA_29 PF13555.6 gi|21227957|ref|NP_633879.1| - 0.03 14.1 0.1 0.056 13.2 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|21227957|ref|NP_633879.1| - 0.083 12.8 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 gi|21227958|ref|NP_633880.1| - 7.5e-22 78.3 0.0 9.8e-22 77.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|21227958|ref|NP_633880.1| - 4.8e-15 55.8 0.3 1e-14 54.7 0.3 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_29 PF13555.6 gi|21227958|ref|NP_633880.1| - 0.012 15.3 0.0 0.027 14.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|21227958|ref|NP_633880.1| - 0.018 15.3 0.0 0.073 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|21227958|ref|NP_633880.1| - 0.018 14.5 0.0 0.028 13.9 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Mg_chelatase PF01078.21 gi|21227958|ref|NP_633880.1| - 0.023 14.1 0.1 0.037 13.4 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|21227958|ref|NP_633880.1| - 0.027 14.2 0.0 0.069 12.9 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 gi|21227958|ref|NP_633880.1| - 0.057 13.8 0.1 0.069 13.5 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|21227958|ref|NP_633880.1| - 0.098 13.1 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|21227958|ref|NP_633880.1| - 0.13 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 NACHT domain SMC_N PF02463.19 gi|21227958|ref|NP_633880.1| - 0.19 11.1 0.0 0.63 9.4 0.0 1.7 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain BPD_transp_1 PF00528.22 gi|21227959|ref|NP_633881.1| - 2.2e-18 66.6 8.8 2.2e-18 66.6 8.8 1.7 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|21227959|ref|NP_633881.1| - 0.062 13.3 0.3 0.062 13.3 0.3 2.6 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C DUF3169 PF11368.8 gi|21227959|ref|NP_633881.1| - 0.094 12.2 2.1 0.1 12.1 0.6 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) BPD_transp_1 PF00528.22 gi|21227960|ref|NP_633882.1| - 8.4e-38 130.0 7.2 1.4e-37 129.2 7.2 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Gly-zipper_YMGG PF13441.6 gi|21227960|ref|NP_633882.1| - 0.047 13.4 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 YMGG-like Gly-zipper SBP_bac_5 PF00496.22 gi|21227961|ref|NP_633883.1| - 1.8e-65 221.3 2.3 2.6e-65 220.9 2.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle PHP PF02811.19 gi|21227962|ref|NP_633884.1| - 0.00055 20.3 0.1 0.0014 19.0 0.1 1.8 1 1 0 1 1 1 1 PHP domain Seipin PF06775.14 gi|21227962|ref|NP_633884.1| - 0.0014 18.8 0.1 0.0022 18.1 0.1 1.3 1 0 0 1 1 1 1 Putative adipose-regulatory protein (Seipin) EFhand_Ca_insen PF08726.10 gi|21227962|ref|NP_633884.1| - 0.027 14.6 0.0 0.063 13.4 0.0 1.6 1 0 0 1 1 1 0 Ca2+ insensitive EF hand PHP_C PF13263.6 gi|21227962|ref|NP_633884.1| - 0.093 12.5 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 PHP-associated Mrr_cat_2 PF13156.6 gi|21227963|ref|NP_633885.1| - 0.00064 19.6 0.0 0.00096 19.0 0.0 1.2 1 0 0 1 1 1 1 Restriction endonuclease Mrr_cat PF04471.12 gi|21227963|ref|NP_633885.1| - 0.003 17.6 0.0 0.0045 17.0 0.0 1.2 1 0 0 1 1 1 1 Restriction endonuclease MFS_1 PF07690.16 gi|21227964|ref|NP_633886.1| - 7.2e-50 169.9 31.8 7.2e-50 169.9 31.8 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|21227964|ref|NP_633886.1| - 2.8e-10 39.2 15.4 3.4e-10 38.9 15.4 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector OATP PF03137.20 gi|21227964|ref|NP_633886.1| - 2.4e-05 22.9 1.0 2.4e-05 22.9 1.0 3.2 2 1 1 3 3 3 1 Organic Anion Transporter Polypeptide (OATP) family MFS_1_like PF12832.7 gi|21227964|ref|NP_633886.1| - 1.3 7.8 24.7 19 3.9 24.7 2.1 1 1 0 1 1 1 0 MFS_1 like family MarR PF01047.22 gi|21227965|ref|NP_633887.1| - 9.1e-13 47.9 0.0 1.8e-12 47.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21227965|ref|NP_633887.1| - 1.2e-11 45.0 0.0 1.9e-11 44.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|21227965|ref|NP_633887.1| - 9.5e-10 38.2 0.0 1.4e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|21227965|ref|NP_633887.1| - 5.5e-05 22.6 0.0 0.00011 21.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding B-block_TFIIIC PF04182.12 gi|21227965|ref|NP_633887.1| - 0.00025 21.1 0.0 0.00044 20.4 0.0 1.4 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_34 PF13601.6 gi|21227965|ref|NP_633887.1| - 0.00072 19.7 0.0 0.0016 18.6 0.0 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|21227965|ref|NP_633887.1| - 0.0009 19.1 0.0 0.0016 18.3 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 gi|21227965|ref|NP_633887.1| - 0.002 18.1 0.0 0.0082 16.1 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain RPA_C PF08784.11 gi|21227965|ref|NP_633887.1| - 0.0023 18.6 0.1 0.019 15.6 0.0 2.1 2 0 0 2 2 2 1 Replication protein A C terminal Replic_Relax PF13814.6 gi|21227965|ref|NP_633887.1| - 0.013 15.5 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation HTH_54 PF18607.1 gi|21227965|ref|NP_633887.1| - 0.015 15.3 0.0 0.033 14.2 0.0 1.5 2 0 0 2 2 2 0 ParA helix turn helix domain HTH_Crp_2 PF13545.6 gi|21227965|ref|NP_633887.1| - 0.018 15.0 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PadR PF03551.14 gi|21227965|ref|NP_633887.1| - 0.035 14.1 0.2 0.08 12.9 0.2 1.6 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|21227965|ref|NP_633887.1| - 0.039 13.9 0.1 0.09 12.8 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix GntR PF00392.21 gi|21227965|ref|NP_633887.1| - 0.056 13.1 0.0 0.098 12.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.10 gi|21227965|ref|NP_633887.1| - 0.065 13.0 0.0 0.098 12.5 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain TFIIE_alpha PF02002.17 gi|21227965|ref|NP_633887.1| - 0.066 13.1 0.1 0.14 12.1 0.1 1.5 1 1 0 1 1 1 0 TFIIE alpha subunit HxlR PF01638.17 gi|21227965|ref|NP_633887.1| - 0.095 12.6 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Fe_dep_repress PF01325.19 gi|21227965|ref|NP_633887.1| - 0.1 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF3116 PF11313.8 gi|21227965|ref|NP_633887.1| - 0.12 12.3 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) RNA_pol_Rpc34 PF05158.12 gi|21227965|ref|NP_633887.1| - 0.16 11.4 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit Mrr_cat PF04471.12 gi|21227966|ref|NP_633888.1| - 0.046 13.7 0.0 0.064 13.3 0.0 1.3 1 0 0 1 1 1 0 Restriction endonuclease Prefoldin_2 PF01920.20 gi|21227967|ref|NP_633889.1| - 9.3e-05 22.3 8.5 0.002 18.1 0.7 2.6 1 1 2 3 3 3 2 Prefoldin subunit ZapB PF06005.12 gi|21227967|ref|NP_633889.1| - 0.00019 21.8 8.2 0.013 15.9 0.3 2.6 1 1 1 2 2 2 1 Cell division protein ZapB DUF4795 PF16043.5 gi|21227967|ref|NP_633889.1| - 0.00031 20.4 8.1 0.00047 19.8 8.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) DUF2730 PF10805.8 gi|21227967|ref|NP_633889.1| - 0.00079 19.5 4.9 0.023 14.8 0.5 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF2730) TolA_bind_tri PF16331.5 gi|21227967|ref|NP_633889.1| - 0.0015 18.6 5.7 0.43 10.7 0.2 2.4 1 1 1 2 2 2 2 TolA binding protein trimerisation bZIP_1 PF00170.21 gi|21227967|ref|NP_633889.1| - 0.0024 17.9 8.8 0.18 11.9 0.9 2.9 2 1 1 3 3 3 2 bZIP transcription factor Baculo_PEP_C PF04513.12 gi|21227967|ref|NP_633889.1| - 0.0025 17.9 4.6 3.3 7.8 0.1 2.2 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Snapin_Pallidin PF14712.6 gi|21227967|ref|NP_633889.1| - 0.0035 17.7 4.6 0.33 11.4 2.4 2.5 1 1 1 2 2 2 1 Snapin/Pallidin FlaC_arch PF05377.11 gi|21227967|ref|NP_633889.1| - 0.0038 17.6 11.1 0.32 11.4 4.0 3.1 1 1 1 2 2 2 2 Flagella accessory protein C (FlaC) Fib_alpha PF08702.10 gi|21227967|ref|NP_633889.1| - 0.0041 17.3 8.2 0.031 14.5 8.2 1.9 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family GAS PF13851.6 gi|21227967|ref|NP_633889.1| - 0.0048 16.3 6.4 0.023 14.0 1.5 2.0 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding Cluap1 PF10234.9 gi|21227967|ref|NP_633889.1| - 0.0049 16.3 7.7 0.0072 15.8 7.7 1.2 1 0 0 1 1 1 1 Clusterin-associated protein-1 Spc24 PF08286.11 gi|21227967|ref|NP_633889.1| - 0.0058 16.9 9.8 0.22 11.8 3.9 2.2 1 1 0 2 2 2 2 Spc24 subunit of Ndc80 DUF3829 PF12889.7 gi|21227967|ref|NP_633889.1| - 0.013 15.0 4.9 0.24 10.8 0.3 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF3829) Herpes_UL6 PF01763.16 gi|21227967|ref|NP_633889.1| - 0.02 13.4 1.9 0.023 13.2 1.9 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like Atg14 PF10186.9 gi|21227967|ref|NP_633889.1| - 0.02 14.0 7.1 0.069 12.2 7.1 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5082 PF16888.5 gi|21227967|ref|NP_633889.1| - 0.022 15.0 8.4 0.26 11.6 8.4 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Cep57_MT_bd PF06657.13 gi|21227967|ref|NP_633889.1| - 0.025 15.0 2.7 0.074 13.5 0.1 2.5 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Cob_adeno_trans PF01923.18 gi|21227967|ref|NP_633889.1| - 0.025 14.7 0.9 0.034 14.3 0.8 1.3 1 1 0 1 1 1 0 Cobalamin adenosyltransferase BLOC1_2 PF10046.9 gi|21227967|ref|NP_633889.1| - 0.025 14.9 5.9 0.87 9.9 1.9 2.2 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Fez1 PF06818.15 gi|21227967|ref|NP_633889.1| - 0.028 14.9 7.1 0.031 14.7 7.1 1.1 1 0 0 1 1 1 0 Fez1 YabA PF06156.13 gi|21227967|ref|NP_633889.1| - 0.03 14.9 8.3 1.7 9.4 5.7 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Spc7 PF08317.11 gi|21227967|ref|NP_633889.1| - 0.03 13.2 10.1 0.092 11.6 9.2 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein Swi5 PF07061.11 gi|21227967|ref|NP_633889.1| - 0.033 14.3 4.2 1.7 8.8 0.8 2.4 1 1 0 2 2 2 0 Swi5 NPV_P10 PF05531.12 gi|21227967|ref|NP_633889.1| - 0.038 14.4 5.8 0.75 10.3 4.4 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.12 gi|21227967|ref|NP_633889.1| - 0.045 13.8 4.9 1.1 9.4 4.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 gi|21227967|ref|NP_633889.1| - 0.049 13.6 6.9 4.7 7.2 0.1 2.8 1 1 0 2 2 2 0 Laminin Domain II DUF1843 PF08898.10 gi|21227967|ref|NP_633889.1| - 0.054 14.0 0.2 1.7 9.2 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1843) EMC3_TMCO1 PF01956.16 gi|21227967|ref|NP_633889.1| - 0.055 13.2 0.4 0.082 12.6 0.3 1.3 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Vps51 PF08700.11 gi|21227967|ref|NP_633889.1| - 0.057 13.5 3.9 0.85 9.7 0.3 2.8 1 1 1 2 2 2 0 Vps51/Vps67 SlyX PF04102.12 gi|21227967|ref|NP_633889.1| - 0.059 14.0 3.6 2.6 8.8 1.4 2.6 1 1 0 2 2 2 0 SlyX CLZ PF16526.5 gi|21227967|ref|NP_633889.1| - 0.059 13.7 7.5 0.66 10.4 1.0 2.9 1 1 2 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4200 PF13863.6 gi|21227967|ref|NP_633889.1| - 0.072 13.5 5.7 0.12 12.8 5.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Bacillus_HBL PF05791.11 gi|21227967|ref|NP_633889.1| - 0.089 12.6 6.9 0.68 9.7 0.9 2.0 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) PCRF PF03462.18 gi|21227967|ref|NP_633889.1| - 0.091 12.6 3.6 0.11 12.3 3.6 1.2 1 0 0 1 1 1 0 PCRF domain Hemerythrin PF01814.23 gi|21227967|ref|NP_633889.1| - 0.092 13.4 0.4 0.43 11.2 0.4 1.9 1 1 0 1 1 1 0 Hemerythrin HHE cation binding domain ABC_tran_CTD PF16326.5 gi|21227967|ref|NP_633889.1| - 0.098 12.9 6.1 4.2 7.7 1.2 2.7 1 1 1 2 2 2 0 ABC transporter C-terminal domain ADIP PF11559.8 gi|21227967|ref|NP_633889.1| - 0.1 12.7 9.3 0.038 14.1 2.2 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DUF848 PF05852.11 gi|21227967|ref|NP_633889.1| - 0.11 12.6 8.1 0.23 11.6 6.1 2.0 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) Occludin_ELL PF07303.13 gi|21227967|ref|NP_633889.1| - 0.14 12.9 4.4 1.1 10.0 1.1 2.1 1 1 1 2 2 2 0 Occludin homology domain Prefoldin PF02996.17 gi|21227967|ref|NP_633889.1| - 0.14 12.0 7.8 48 3.9 7.8 2.9 1 1 0 1 1 1 0 Prefoldin subunit NleF_casp_inhib PF16809.5 gi|21227967|ref|NP_633889.1| - 0.16 11.8 7.6 1 9.2 4.6 2.2 1 1 1 2 2 2 0 NleF caspase inhibitor XhlA PF10779.9 gi|21227967|ref|NP_633889.1| - 0.17 12.1 10.3 1.1 9.5 0.5 3.0 1 1 0 2 2 2 0 Haemolysin XhlA YojJ PF10372.9 gi|21227967|ref|NP_633889.1| - 0.18 11.9 5.4 3.6 7.7 0.4 2.7 1 1 1 2 2 2 0 Bacterial membrane-spanning protein N-terminus GIT_CC PF16559.5 gi|21227967|ref|NP_633889.1| - 0.19 11.6 6.4 0.25 11.2 1.7 2.5 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor APG6_N PF17675.1 gi|21227967|ref|NP_633889.1| - 0.23 12.0 10.4 2.1 8.9 2.2 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF2203 PF09969.9 gi|21227967|ref|NP_633889.1| - 0.24 12.1 2.4 6.2 7.6 2.4 2.1 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF4407 PF14362.6 gi|21227967|ref|NP_633889.1| - 0.25 10.7 3.4 1 8.7 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) RPW8 PF05659.11 gi|21227967|ref|NP_633889.1| - 0.28 10.9 5.7 0.84 9.3 0.9 2.3 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 TPR_MLP1_2 PF07926.12 gi|21227967|ref|NP_633889.1| - 0.29 11.2 8.2 2.4 8.2 0.6 2.6 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF4140 PF13600.6 gi|21227967|ref|NP_633889.1| - 0.31 11.5 4.7 3.3 8.2 0.4 2.2 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Csm2_III-A PF03750.13 gi|21227967|ref|NP_633889.1| - 0.34 11.7 3.6 6.1 7.7 3.2 2.2 1 1 1 2 2 2 0 Csm2 Type III-A GTP-bdg_M PF16360.5 gi|21227967|ref|NP_633889.1| - 0.41 11.3 3.8 2.5 8.8 2.1 2.8 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region Prominin PF05478.11 gi|21227967|ref|NP_633889.1| - 0.44 8.4 6.1 1.1 7.1 5.1 1.7 1 1 0 1 1 1 0 Prominin Ax_dynein_light PF10211.9 gi|21227967|ref|NP_633889.1| - 0.44 10.5 9.0 0.5 10.3 2.1 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain CorA PF01544.18 gi|21227967|ref|NP_633889.1| - 0.47 9.7 7.7 4.2 6.6 7.7 2.2 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein DASH_Dad3 PF08656.10 gi|21227967|ref|NP_633889.1| - 0.5 10.5 8.7 38 4.4 8.7 2.9 1 1 0 1 1 1 0 DASH complex subunit Dad3 DASH_Dam1 PF08653.10 gi|21227967|ref|NP_633889.1| - 0.53 10.1 5.1 17 5.3 0.5 3.6 2 2 2 4 4 4 0 DASH complex subunit Dam1 Med4 PF10018.9 gi|21227967|ref|NP_633889.1| - 0.63 9.7 6.9 5 6.8 0.8 2.3 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Rho_Binding PF08912.11 gi|21227967|ref|NP_633889.1| - 0.64 10.9 10.3 0.7 10.8 0.2 3.1 1 1 1 2 2 2 0 Rho Binding FliD_N PF02465.18 gi|21227967|ref|NP_633889.1| - 0.67 10.7 3.8 6.8 7.5 0.1 2.3 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus HalX PF08663.10 gi|21227967|ref|NP_633889.1| - 1.1 9.7 5.7 2.9 8.3 0.1 3.2 1 1 2 3 3 3 0 HalX domain DivIVA PF05103.13 gi|21227967|ref|NP_633889.1| - 1.7 8.7 8.3 2.6 8.1 0.2 2.8 1 1 2 3 3 3 0 DivIVA protein UPF0184 PF03670.13 gi|21227967|ref|NP_633889.1| - 2.1 8.8 7.7 1.9 8.9 3.1 2.6 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0184) GrpE PF01025.19 gi|21227967|ref|NP_633889.1| - 2.8 7.6 9.6 6.1 6.5 1.4 2.1 1 1 1 2 2 2 0 GrpE YgaB PF14182.6 gi|21227967|ref|NP_633889.1| - 2.9 8.3 8.4 3.5 8.1 1.6 2.8 1 1 2 3 3 3 0 YgaB-like protein LMBR1 PF04791.16 gi|21227967|ref|NP_633889.1| - 6.1 5.6 5.4 7.1 5.4 5.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein MH1 PF03165.16 gi|21227969|ref|NP_633891.1| - 0.013 15.7 1.0 0.027 14.7 1.0 1.6 1 1 0 1 1 1 0 MH1 domain ParE_toxin PF05016.15 gi|21227969|ref|NP_633891.1| - 0.14 12.8 0.0 0.16 12.6 0.0 1.1 1 0 0 1 1 1 0 ParE toxin of type II toxin-antitoxin system, parDE DUF2683 PF10884.8 gi|21227970|ref|NP_633892.1| - 1.4e-22 79.8 1.3 1.6e-22 79.6 1.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) XH PF03469.14 gi|21227970|ref|NP_633892.1| - 0.046 13.6 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 XH domain NurA PF09376.10 gi|21227971|ref|NP_633893.1| - 2.4e-07 30.7 0.0 4.1e-07 29.9 0.0 1.5 1 1 0 1 1 1 1 NurA domain DUF87 PF01935.17 gi|21227972|ref|NP_633894.1| - 7.1e-11 42.6 0.0 1.6e-10 41.5 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|21227972|ref|NP_633894.1| - 7e-07 28.2 0.0 0.0013 17.4 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_10 PF12846.7 gi|21227972|ref|NP_633894.1| - 5.4e-06 25.6 0.0 0.0055 15.7 0.0 2.4 2 0 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 gi|21227972|ref|NP_633894.1| - 2.7e-05 24.5 0.0 0.0033 17.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain DEAD PF00270.29 gi|21227972|ref|NP_633894.1| - 0.00013 21.8 0.0 0.6 9.9 0.0 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase ResIII PF04851.15 gi|21227972|ref|NP_633894.1| - 0.0006 19.9 0.0 0.059 13.4 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA PF00004.29 gi|21227972|ref|NP_633894.1| - 0.0008 19.8 1.7 0.62 10.5 0.0 2.8 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|21227972|ref|NP_633894.1| - 0.0033 17.0 0.0 0.0058 16.2 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|21227972|ref|NP_633894.1| - 0.0084 16.5 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 RNA helicase TrwB_AAD_bind PF10412.9 gi|21227972|ref|NP_633894.1| - 0.0088 15.0 0.0 0.015 14.2 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_16 PF13191.6 gi|21227972|ref|NP_633894.1| - 0.02 15.3 0.0 0.23 11.8 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain HAS-barrel PF09378.10 gi|21227972|ref|NP_633894.1| - 0.022 14.9 0.0 0.062 13.5 0.0 1.7 1 0 0 1 1 1 0 HAS barrel domain AAA_33 PF13671.6 gi|21227972|ref|NP_633894.1| - 0.062 13.5 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain FidL_like PF15941.5 gi|21227972|ref|NP_633894.1| - 0.094 13.2 0.3 0.27 11.7 0.3 1.8 1 0 0 1 1 1 0 FidL-like putative membrane protein AAA_18 PF13238.6 gi|21227972|ref|NP_633894.1| - 0.12 12.9 0.0 0.35 11.4 0.0 1.8 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|21227972|ref|NP_633894.1| - 0.14 11.4 0.0 0.53 9.6 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family Sigma54_activat PF00158.26 gi|21227972|ref|NP_633894.1| - 0.16 11.6 0.0 0.3 10.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain SopD PF11047.8 gi|21227972|ref|NP_633894.1| - 0.17 11.1 0.1 0.47 9.6 0.0 1.7 2 0 0 2 2 2 0 Salmonella outer protein D Flavoprotein PF02441.19 gi|21227973|ref|NP_633895.1| - 2.3e-27 95.7 0.0 2.7e-27 95.5 0.0 1.1 1 0 0 1 1 1 1 Flavoprotein DUF1652 PF07865.11 gi|21227974|ref|NP_633896.1| - 0.025 14.4 0.1 2.2 8.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1652) HD PF01966.22 gi|21227975|ref|NP_633897.1| - 1e-14 54.8 2.9 6.4e-13 49.0 0.9 2.8 2 1 0 2 2 2 2 HD domain UPF0052 PF01933.18 gi|21227976|ref|NP_633898.1| - 2.4e-48 164.9 0.0 2.8e-48 164.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 FmdE PF02663.14 gi|21227977|ref|NP_633899.1| - 4.1e-21 75.4 0.0 5.5e-09 36.2 0.0 3.0 3 0 0 3 3 3 2 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Pribosyltran PF00156.27 gi|21227978|ref|NP_633900.1| - 2.1e-20 72.8 0.5 2.7e-20 72.5 0.5 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|21227978|ref|NP_633900.1| - 0.00012 21.7 0.0 0.00018 21.1 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|21227978|ref|NP_633900.1| - 0.00047 19.7 0.1 0.0007 19.2 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase Diphthamide_syn PF01866.17 gi|21227979|ref|NP_633901.1| - 2.1e-87 293.4 0.0 2.6e-87 293.1 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein MTS PF05175.14 gi|21227980|ref|NP_633902.1| - 1.9e-14 53.5 0.0 2.6e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|21227980|ref|NP_633902.1| - 2.9e-14 53.2 0.1 3.8e-14 52.8 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|21227980|ref|NP_633902.1| - 2.2e-10 41.1 0.0 4e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21227980|ref|NP_633902.1| - 3.2e-10 40.0 0.0 4.7e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|21227980|ref|NP_633902.1| - 4.1e-07 29.9 0.2 1.8e-06 27.8 0.2 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 gi|21227980|ref|NP_633902.1| - 5.3e-07 30.2 0.0 1.1e-06 29.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|21227980|ref|NP_633902.1| - 0.00015 21.6 0.0 0.00017 21.4 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.6 gi|21227980|ref|NP_633902.1| - 0.00033 20.5 0.0 0.00041 20.2 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|21227980|ref|NP_633902.1| - 0.0015 18.6 0.0 0.0016 18.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|21227980|ref|NP_633902.1| - 0.0024 17.5 0.0 0.0032 17.1 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PCMT PF01135.19 gi|21227980|ref|NP_633902.1| - 0.0032 17.2 0.0 0.0044 16.8 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|21227980|ref|NP_633902.1| - 0.0044 16.4 0.0 0.006 16.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 gi|21227980|ref|NP_633902.1| - 0.021 14.8 0.1 0.031 14.2 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_15 PF09445.10 gi|21227980|ref|NP_633902.1| - 0.023 14.3 0.0 0.032 13.8 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_12 PF08242.12 gi|21227980|ref|NP_633902.1| - 0.026 15.3 0.1 0.093 13.5 0.1 1.9 2 1 0 2 2 1 0 Methyltransferase domain ADH_zinc_N PF00107.26 gi|21227980|ref|NP_633902.1| - 0.026 14.5 0.0 0.046 13.7 0.0 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase DUF43 PF01861.16 gi|21227980|ref|NP_633902.1| - 0.063 12.5 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain Hema_stalk PF08720.10 gi|21227980|ref|NP_633902.1| - 0.081 12.6 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Influenza C hemagglutinin stalk AviRa PF11599.8 gi|21227980|ref|NP_633902.1| - 0.12 11.9 0.0 0.17 11.3 0.0 1.4 1 0 0 1 1 1 0 RRNA methyltransferase AviRa ECR1_N PF14382.6 gi|21227981|ref|NP_633903.1| - 1.3e-08 34.5 0.2 2.7e-08 33.4 0.2 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.9 gi|21227981|ref|NP_633903.1| - 2.6e-06 28.0 1.7 0.00021 21.8 0.4 2.6 1 1 1 2 2 2 2 Exosome component EXOSC1/CSL4 S1 PF00575.23 gi|21227981|ref|NP_633903.1| - 0.015 15.6 6.2 0.81 10.1 0.8 2.7 2 0 0 2 2 2 0 S1 RNA binding domain ALS_ss_C PF10369.9 gi|21227981|ref|NP_633903.1| - 0.017 15.3 0.4 2.9 8.2 0.0 2.8 1 1 1 2 2 2 0 Small subunit of acetolactate synthase HypA PF01155.19 gi|21227981|ref|NP_633903.1| - 0.038 14.0 0.1 0.061 13.4 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-LITAF-like PF10601.9 gi|21227981|ref|NP_633903.1| - 0.16 12.3 0.7 20 5.5 0.1 2.5 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain DUF4362 PF14275.6 gi|21227981|ref|NP_633903.1| - 7 7.0 5.7 17 5.8 0.9 2.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4362) RNA_pol_L_2 PF13656.6 gi|21227982|ref|NP_633904.1| - 6.5e-16 57.9 0.0 7.9e-16 57.6 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|21227982|ref|NP_633904.1| - 0.0042 16.5 0.1 0.014 14.8 0.1 1.8 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain CRM1_C PF08767.11 gi|21227982|ref|NP_633904.1| - 0.078 12.1 0.0 0.087 12.0 0.0 1.1 1 0 0 1 1 1 0 CRM1 C terminal SepSecS PF05889.13 gi|21227983|ref|NP_633905.1| - 2.4e-56 191.1 0.0 4.6e-56 190.2 0.0 1.4 1 1 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_5 PF00266.19 gi|21227983|ref|NP_633905.1| - 1.4e-15 57.2 0.0 1.9e-15 56.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|21227983|ref|NP_633905.1| - 1.1e-09 38.0 0.0 1.4e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II OKR_DC_1 PF01276.20 gi|21227983|ref|NP_633905.1| - 0.0022 16.8 0.0 0.0076 15.0 0.0 1.7 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Pyridoxal_deC PF00282.19 gi|21227983|ref|NP_633905.1| - 0.011 14.5 0.0 0.018 13.8 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain Rib PF08428.10 gi|21227983|ref|NP_633905.1| - 0.093 12.7 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 Rib/alpha-like repeat PspC PF04024.12 gi|21227983|ref|NP_633905.1| - 0.094 12.6 0.0 0.38 10.6 0.0 1.9 2 0 0 2 2 2 0 PspC domain DegT_DnrJ_EryC1 PF01041.17 gi|21227983|ref|NP_633905.1| - 0.095 12.0 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family HTH_20 PF12840.7 gi|21227984|ref|NP_633906.1| - 1.9e-05 24.6 0.0 2.9e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|21227984|ref|NP_633906.1| - 0.00013 22.1 0.0 0.00019 21.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|21227984|ref|NP_633906.1| - 0.0002 21.2 0.0 0.0003 20.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|21227984|ref|NP_633906.1| - 0.0043 17.0 0.1 0.0068 16.4 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.19 gi|21227984|ref|NP_633906.1| - 0.047 13.6 0.0 0.1 12.5 0.0 1.7 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF2148 PF09918.9 gi|21227985|ref|NP_633907.1| - 6.7e-30 102.9 1.3 1.4e-29 101.9 1.3 1.6 1 0 0 1 1 1 1 Uncharacterized protein containing a ferredoxin domain (DUF2148) FeS PF04060.13 gi|21227985|ref|NP_633907.1| - 0.00061 19.4 1.9 0.0014 18.3 1.9 1.6 1 0 0 1 1 1 1 Putative Fe-S cluster zf-C2H2_2 PF12756.7 gi|21227985|ref|NP_633907.1| - 0.13 12.7 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Y1_Tnp PF01797.16 gi|21227986|ref|NP_633908.1| - 1.1e-35 122.3 1.5 1.4e-35 122.0 1.5 1.1 1 0 0 1 1 1 1 Transposase IS200 like Orn_Arg_deC_N PF02784.16 gi|21227987|ref|NP_633909.1| - 2.4e-31 109.0 0.0 3e-31 108.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|21227987|ref|NP_633909.1| - 2.7e-20 72.4 0.0 2.7e-20 72.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HAD PF12710.7 gi|21227988|ref|NP_633910.1| - 5.7e-17 62.7 0.0 8e-17 62.3 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|21227988|ref|NP_633910.1| - 0.004 17.5 0.0 0.016 15.5 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|21227988|ref|NP_633910.1| - 0.048 13.4 0.5 0.18 11.5 0.1 2.0 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase 2_5_RNA_ligase2 PF13563.6 gi|21227989|ref|NP_633911.1| - 6.4e-05 22.9 0.0 0.00014 21.8 0.0 1.5 1 1 0 1 1 1 1 2'-5' RNA ligase superfamily LigT_PEase PF02834.16 gi|21227989|ref|NP_633911.1| - 0.0018 18.4 0.1 0.054 13.7 0.0 2.3 2 0 0 2 2 2 1 LigT like Phosphoesterase INTS2 PF14750.6 gi|21227989|ref|NP_633911.1| - 0.15 9.6 0.0 0.19 9.3 0.0 1.0 1 0 0 1 1 1 0 Integrator complex subunit 2 DUF4277 PF14104.6 gi|21227990|ref|NP_633912.1| - 2.4e-38 130.8 0.0 5.2e-38 129.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|21227990|ref|NP_633912.1| - 2.4e-11 43.7 0.3 1.5e-10 41.1 0.3 2.0 1 1 0 1 1 1 1 Transposase DDE domain ArgoMid PF16487.5 gi|21227990|ref|NP_633912.1| - 0.13 12.5 0.2 7.5 6.9 0.0 2.9 3 0 0 3 3 3 0 Mid domain of argonaute DUF308 PF03729.13 gi|21227991|ref|NP_633913.1| - 9.5e-05 22.7 20.3 0.049 14.0 8.2 3.3 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) DUF5392 PF17370.2 gi|21227991|ref|NP_633913.1| - 0.059 13.5 0.0 0.16 12.1 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5392) 7TMR-DISM_7TM PF07695.11 gi|21227991|ref|NP_633913.1| - 2.1 8.2 19.0 1.5 8.7 11.8 2.2 1 1 1 2 2 2 0 7TM diverse intracellular signalling MS_channel PF00924.18 gi|21227992|ref|NP_633914.1| - 2.4e-43 148.1 1.8 4.5e-43 147.2 1.8 1.5 1 0 0 1 1 1 1 Mechanosensitive ion channel Myco_arth_vir_N PF09610.10 gi|21227992|ref|NP_633914.1| - 0.98 9.6 3.8 2.2 8.4 3.8 1.6 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) Na_H_Exchanger PF00999.21 gi|21227993|ref|NP_633915.1| - 1.5e-30 106.3 49.7 1.8e-30 106.0 49.7 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF4904 PF16247.5 gi|21227993|ref|NP_633915.1| - 0.00026 20.8 0.0 0.00052 19.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4904) Form-deh_trans PF09163.11 gi|21227993|ref|NP_633915.1| - 4.2 7.2 9.1 0.2 11.5 0.7 3.1 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Sulfatase PF00884.23 gi|21227994|ref|NP_633916.1| - 5.6e-63 213.2 0.0 8.9e-63 212.5 0.0 1.3 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 gi|21227994|ref|NP_633916.1| - 8e-07 29.8 0.0 1.6e-06 28.9 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of aryl-sulfatase Phosphodiest PF01663.22 gi|21227994|ref|NP_633916.1| - 0.00084 19.0 0.0 0.2 11.2 0.0 2.2 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF5040 PF16443.5 gi|21227994|ref|NP_633916.1| - 0.19 11.1 0.0 0.32 10.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5040) Radical_SAM PF04055.21 gi|21227995|ref|NP_633917.1| - 3.9e-15 56.6 0.0 6e-15 56.0 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SEC-C PF02810.15 gi|21227995|ref|NP_633917.1| - 8.6e-11 41.5 5.7 2e-10 40.4 5.7 1.7 1 0 0 1 1 1 1 SEC-C motif SPASM PF13186.6 gi|21227995|ref|NP_633917.1| - 5.4e-08 33.2 0.1 1.6e-07 31.7 0.1 1.9 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|21227995|ref|NP_633917.1| - 6e-05 23.3 0.0 6e-05 23.3 0.0 1.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|21227995|ref|NP_633917.1| - 0.026 14.7 0.0 0.045 13.9 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain DNA_pol_B_thumb PF14791.6 gi|21227996|ref|NP_633918.1| - 2.6e-22 78.7 0.4 7.2e-22 77.3 0.1 2.0 2 0 0 2 2 1 1 DNA polymerase beta thumb HHH_8 PF14716.6 gi|21227996|ref|NP_633918.1| - 5.1e-20 71.6 6.4 9.6e-20 70.7 0.4 3.8 3 1 1 4 4 4 1 Helix-hairpin-helix domain PHP PF02811.19 gi|21227996|ref|NP_633918.1| - 1e-11 45.4 0.0 2.5e-11 44.2 0.0 1.7 1 0 0 1 1 1 1 PHP domain HHH_5 PF14520.6 gi|21227996|ref|NP_633918.1| - 1.8e-08 34.9 5.3 1.8e-05 25.2 0.4 3.6 3 0 0 3 3 3 2 Helix-hairpin-helix domain HHH_3 PF12836.7 gi|21227996|ref|NP_633918.1| - 0.00015 21.9 0.5 0.48 10.7 0.0 3.1 3 0 0 3 3 3 2 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|21227996|ref|NP_633918.1| - 0.00038 20.5 0.6 0.02 15.0 0.0 2.9 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH PF00633.23 gi|21227996|ref|NP_633918.1| - 0.00048 19.8 0.8 0.018 14.9 0.1 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif DNA_pol_B_palm PF14792.6 gi|21227996|ref|NP_633918.1| - 0.0019 18.4 0.0 0.0059 16.8 0.0 1.8 1 0 0 1 1 1 1 DNA polymerase beta palm RNase_P_p30 PF01876.16 gi|21227996|ref|NP_633918.1| - 0.0087 15.6 0.0 0.022 14.2 0.0 1.7 1 1 0 1 1 1 1 RNase P subunit p30 DUF3701 PF12482.8 gi|21227996|ref|NP_633918.1| - 0.012 15.7 0.0 2.6 8.2 0.0 2.6 2 0 0 2 2 2 0 Phage integrase protein DNA_pol_lambd_f PF10391.9 gi|21227996|ref|NP_633918.1| - 0.04 13.8 0.0 1.3 8.9 0.0 2.7 2 0 0 2 2 2 0 Fingers domain of DNA polymerase lambda IMS_HHH PF11798.8 gi|21227996|ref|NP_633918.1| - 0.061 13.7 0.3 12 6.5 0.0 3.4 3 0 0 3 3 3 0 IMS family HHH motif Cdd1 PF11731.8 gi|21227996|ref|NP_633918.1| - 0.14 12.4 0.1 3.8 7.8 0.0 2.6 1 1 1 2 2 2 0 Pathogenicity locus DUF1700 PF08006.11 gi|21227996|ref|NP_633918.1| - 0.23 11.0 0.3 2 8.0 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) RNA_pol_A_CTD PF03118.15 gi|21227996|ref|NP_633918.1| - 2.4 8.0 4.8 13 5.7 0.3 3.5 3 1 1 4 4 4 0 Bacterial RNA polymerase, alpha chain C terminal domain DNA_ligase_A_M PF01068.21 gi|21227997|ref|NP_633919.1| - 1.9e-55 187.7 1.1 3.2e-55 187.0 1.1 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|21227997|ref|NP_633919.1| - 7.3e-40 137.1 0.4 1.2e-38 133.1 0.3 2.4 2 0 0 2 2 2 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|21227997|ref|NP_633919.1| - 8e-22 77.7 0.0 2.9e-21 75.9 0.0 2.0 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|21227997|ref|NP_633919.1| - 1.9e-07 31.5 0.7 3.7e-07 30.6 0.7 1.4 1 0 0 1 1 1 1 RNA ligase DNA_ligase_OB_2 PF14743.6 gi|21227997|ref|NP_633919.1| - 1.6e-05 24.8 0.4 0.0069 16.4 0.0 2.6 2 0 0 2 2 2 2 DNA ligase OB-like domain Vps5 PF09325.10 gi|21227997|ref|NP_633919.1| - 0.028 14.0 0.5 0.12 11.9 0.1 2.0 2 0 0 2 2 2 0 Vps5 C terminal like 4HBT PF03061.22 gi|21227998|ref|NP_633920.1| - 2.7e-10 40.5 0.0 3.9e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|21227998|ref|NP_633920.1| - 9.1e-05 22.6 0.2 0.00017 21.7 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4442) FCH PF00611.23 gi|21227998|ref|NP_633920.1| - 0.098 13.0 0.0 0.28 11.5 0.0 1.7 1 1 1 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain DUF4430 PF14478.6 gi|21227999|ref|NP_633921.1| - 2.1e-06 28.2 1.2 2.1e-06 28.2 1.2 2.7 3 0 0 3 3 3 1 Domain of unknown function (DUF4430) ApoO PF09769.9 gi|21227999|ref|NP_633921.1| - 0.087 12.8 0.2 0.31 11.0 0.2 1.9 1 0 0 1 1 1 0 Apolipoprotein O GARP PF16731.5 gi|21227999|ref|NP_633921.1| - 0.098 12.3 3.0 0.41 10.3 0.8 2.4 2 0 0 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma Alanine_zipper PF11839.8 gi|21227999|ref|NP_633921.1| - 1.1 9.7 4.0 2.9 8.3 4.0 1.7 1 0 0 1 1 1 0 Alanine-zipper, major outer membrane lipoprotein I_LWEQ PF01608.17 gi|21227999|ref|NP_633921.1| - 1.3 9.2 5.2 0.58 10.4 1.2 2.4 2 0 0 2 2 2 0 I/LWEQ domain Ion_trans_2 PF07885.16 gi|21228000|ref|NP_633922.1| - 1.4e-06 28.2 8.3 1.4e-06 28.2 8.3 1.8 2 0 0 2 2 2 1 Ion channel Lig_chan PF00060.26 gi|21228000|ref|NP_633922.1| - 4.9e-05 23.2 0.3 9.2e-05 22.3 0.3 1.6 1 0 0 1 1 1 1 Ligand-gated ion channel HDOD PF08668.12 gi|21228000|ref|NP_633922.1| - 0.058 12.9 0.0 0.098 12.1 0.0 1.3 1 0 0 1 1 1 0 HDOD domain 7tm_7 PF08395.12 gi|21228000|ref|NP_633922.1| - 0.13 11.4 7.7 0.58 9.3 1.4 2.7 2 1 0 2 2 2 0 7tm Chemosensory receptor ASFV_J13L PF05568.11 gi|21228000|ref|NP_633922.1| - 0.15 11.8 0.7 0.22 11.3 0.7 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Class_IIIsignal PF04021.12 gi|21228000|ref|NP_633922.1| - 0.24 11.4 0.2 0.24 11.4 0.2 2.5 2 0 0 2 2 2 0 Class III signal peptide RPAP1_N PF08621.10 gi|21228000|ref|NP_633922.1| - 0.43 10.4 5.5 0.083 12.7 1.4 1.9 2 0 0 2 2 2 0 RPAP1-like, N-terminal Ferric_reduct PF01794.19 gi|21228002|ref|NP_633924.1| - 1.9e-06 28.0 8.5 1.9e-06 28.0 8.5 2.0 2 0 0 2 2 2 1 Ferric reductase like transmembrane component DUF4231 PF14015.6 gi|21228002|ref|NP_633924.1| - 0.21 12.1 1.3 1.2 9.6 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) Acetyltransf_4 PF13420.7 gi|21228004|ref|NP_633926.1| - 1.1e-17 64.5 0.0 1.3e-17 64.3 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21228004|ref|NP_633926.1| - 5.3e-14 52.5 0.0 6.6e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|21228004|ref|NP_633926.1| - 1.1e-11 45.5 0.0 1.3e-11 45.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|21228004|ref|NP_633926.1| - 1.3e-06 28.8 0.0 1.7e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21228004|ref|NP_633926.1| - 9.5e-06 25.6 0.0 1.1e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21228004|ref|NP_633926.1| - 0.03 14.3 0.0 0.04 13.9 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_CG PF14542.6 gi|21228004|ref|NP_633926.1| - 0.058 13.5 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase MarR PF01047.22 gi|21228005|ref|NP_633927.1| - 4.1e-12 45.8 0.0 7.6e-12 45.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21228005|ref|NP_633927.1| - 2.1e-08 34.6 0.0 3.9e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|21228005|ref|NP_633927.1| - 4.6e-08 32.8 0.0 7.5e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|21228005|ref|NP_633927.1| - 1e-07 32.0 0.0 1.7e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|21228005|ref|NP_633927.1| - 9.7e-07 28.3 0.0 1.8e-06 27.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|21228005|ref|NP_633927.1| - 1.8e-06 28.0 0.5 3.3e-06 27.2 0.1 1.7 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|21228005|ref|NP_633927.1| - 3.6e-05 23.6 0.2 0.00011 22.0 0.1 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|21228005|ref|NP_633927.1| - 0.00083 19.2 0.0 0.0016 18.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HxlR PF01638.17 gi|21228005|ref|NP_633927.1| - 0.0028 17.5 0.0 0.0043 16.9 0.0 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_Crp_2 PF13545.6 gi|21228005|ref|NP_633927.1| - 0.004 17.1 0.1 0.013 15.5 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain FeoC PF09012.10 gi|21228005|ref|NP_633927.1| - 0.0063 16.6 0.2 0.015 15.3 0.0 1.7 2 0 0 2 2 2 1 FeoC like transcriptional regulator Rrf2 PF02082.20 gi|21228005|ref|NP_633927.1| - 0.0064 16.8 0.1 0.01 16.1 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.10 gi|21228005|ref|NP_633927.1| - 0.0073 16.1 0.0 0.014 15.2 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|21228005|ref|NP_633927.1| - 0.0086 16.1 0.0 0.057 13.5 0.0 2.1 2 1 0 2 2 2 1 Helix-turn-helix domain KORA PF16509.5 gi|21228005|ref|NP_633927.1| - 0.011 16.1 0.1 0.022 15.0 0.1 1.5 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor PadR PF03551.14 gi|21228005|ref|NP_633927.1| - 0.012 15.6 0.0 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|21228005|ref|NP_633927.1| - 0.032 14.2 0.1 0.069 13.2 0.0 1.6 2 0 0 2 2 1 0 Winged helix-turn-helix HTH_11 PF08279.12 gi|21228005|ref|NP_633927.1| - 0.047 13.6 0.1 0.11 12.5 0.0 1.6 2 0 0 2 2 1 0 HTH domain HTH_1 PF00126.27 gi|21228005|ref|NP_633927.1| - 0.063 13.2 0.0 0.13 12.2 0.0 1.6 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_36 PF13730.6 gi|21228005|ref|NP_633927.1| - 0.064 13.2 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2250 PF10007.9 gi|21228005|ref|NP_633927.1| - 0.08 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF4423 PF14394.6 gi|21228005|ref|NP_633927.1| - 0.12 12.1 0.1 0.22 11.2 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) Rhodanese PF00581.20 gi|21228006|ref|NP_633928.1| - 1.2e-20 74.0 0.0 1.5e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF2238 PF09997.9 gi|21228007|ref|NP_633929.1| - 0.0014 18.4 3.9 0.0014 18.4 3.9 1.9 1 1 0 1 1 1 1 Predicted membrane protein (DUF2238) DUF3180 PF11377.8 gi|21228007|ref|NP_633929.1| - 0.053 13.7 1.1 0.17 12.0 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3180) DUF2769 PF10967.8 gi|21228008|ref|NP_633930.1| - 3e-08 34.2 15.7 8.6e-07 29.5 15.4 2.6 1 1 2 3 3 3 2 Protein of unknown function (DUF2769) Whib PF02467.16 gi|21228008|ref|NP_633930.1| - 0.0088 16.6 0.7 0.0088 16.6 0.7 2.4 2 1 0 2 2 2 1 Transcription factor WhiB Isochorismatase PF00857.20 gi|21228009|ref|NP_633931.1| - 9.9e-42 143.1 0.0 1.1e-41 142.9 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family ICMT PF04140.14 gi|21228010|ref|NP_633932.1| - 2.1e-20 72.9 0.2 2.8e-20 72.5 0.2 1.1 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 gi|21228010|ref|NP_633932.1| - 2.5e-15 56.7 0.2 3e-15 56.5 0.2 1.1 1 0 0 1 1 1 1 Phospholipid methyltransferase DUF1295 PF06966.12 gi|21228010|ref|NP_633932.1| - 0.00021 20.9 0.1 0.00026 20.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Na_H_Exchanger PF00999.21 gi|21228011|ref|NP_633933.1| - 8.9e-59 199.2 49.0 1.3e-58 198.7 49.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|21228011|ref|NP_633933.1| - 6.6e-20 71.5 0.2 1.1e-19 70.8 0.2 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|21228011|ref|NP_633933.1| - 1.7e-10 40.6 0.0 6.2e-10 38.8 0.0 2.1 2 0 0 2 2 2 1 TrkA-C domain Maf PF02545.14 gi|21228012|ref|NP_633934.1| - 1.8e-49 167.8 0.0 2.1e-49 167.6 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein tRNA-synt_1e PF01406.19 gi|21228013|ref|NP_633935.1| - 8.1e-106 353.7 0.0 1.1e-105 353.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|21228013|ref|NP_633935.1| - 4.1e-15 55.4 0.1 5.8e-07 28.6 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.11 gi|21228013|ref|NP_633935.1| - 1.5e-14 54.2 0.0 3.2e-14 53.1 0.0 1.6 1 0 0 1 1 1 1 DALR domain tRNA-synt_1f PF01921.18 gi|21228013|ref|NP_633935.1| - 3.5e-12 45.9 0.0 6.6e-06 25.3 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 gi|21228013|ref|NP_633935.1| - 3.7e-09 35.4 0.1 2.1e-06 26.3 0.0 2.5 3 0 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1c PF00749.21 gi|21228013|ref|NP_633935.1| - 0.0051 15.7 0.0 0.014 14.3 0.0 1.7 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1d PF00750.19 gi|21228013|ref|NP_633935.1| - 0.013 14.5 0.2 0.3 10.0 0.0 2.5 2 0 0 2 2 2 0 tRNA synthetases class I (R) Lon_C PF05362.13 gi|21228015|ref|NP_633937.1| - 1.4e-09 37.8 3.9 1.6e-08 34.3 3.9 2.1 1 1 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain DUF4763 PF15960.5 gi|21228015|ref|NP_633937.1| - 0.0023 17.3 0.4 0.0032 16.8 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) MscS_porin PF12795.7 gi|21228015|ref|NP_633937.1| - 0.0029 17.2 5.9 0.004 16.7 5.9 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel porin domain HrpB7 PF09486.10 gi|21228015|ref|NP_633937.1| - 0.0038 17.6 0.1 0.0063 16.9 0.1 1.2 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) KASH_CCD PF14662.6 gi|21228015|ref|NP_633937.1| - 0.04 13.7 2.5 0.061 13.1 2.5 1.2 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH HemX PF04375.14 gi|21228015|ref|NP_633937.1| - 0.042 13.1 0.5 0.056 12.7 0.5 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3139 PF11337.8 gi|21228015|ref|NP_633937.1| - 0.068 13.8 0.2 0.18 12.5 0.1 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF3139) Pox_A_type_inc PF04508.12 gi|21228015|ref|NP_633937.1| - 0.09 12.7 0.1 0.8 9.7 0.0 2.2 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat FPP PF05911.11 gi|21228015|ref|NP_633937.1| - 0.11 10.6 0.9 0.15 10.2 0.9 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil Med4 PF10018.9 gi|21228015|ref|NP_633937.1| - 0.18 11.4 1.1 0.29 10.8 1.1 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DivIC PF04977.15 gi|21228015|ref|NP_633937.1| - 0.2 11.5 1.8 0.43 10.4 1.8 1.5 1 0 0 1 1 1 0 Septum formation initiator TSC22 PF01166.18 gi|21228015|ref|NP_633937.1| - 0.45 10.9 4.9 0.47 10.8 3.4 1.8 1 1 0 1 1 1 0 TSC-22/dip/bun family bZIP_2 PF07716.15 gi|21228015|ref|NP_633937.1| - 1.4 9.0 4.9 3.1 7.9 4.9 1.6 1 0 0 1 1 1 0 Basic region leucine zipper Metallophos_2 PF12850.7 gi|21228016|ref|NP_633938.1| - 1.3e-06 28.8 0.0 1.8e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|21228016|ref|NP_633938.1| - 4.3e-06 27.4 0.2 5.9e-06 26.9 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Tubulin-binding PF00418.19 gi|21228016|ref|NP_633938.1| - 0.0069 16.4 0.0 0.013 15.6 0.0 1.5 1 0 0 1 1 1 1 Tau and MAP protein, tubulin-binding repeat DNA_pol_E_B PF04042.16 gi|21228016|ref|NP_633938.1| - 0.058 12.7 0.0 0.22 10.8 0.0 1.8 1 1 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B PocR PF10114.9 gi|21228017|ref|NP_633939.1| - 1.7e-47 161.2 0.3 5.8e-47 159.5 0.0 1.9 2 0 0 2 2 2 1 Sensory domain found in PocR HisKA_2 PF07568.12 gi|21228017|ref|NP_633939.1| - 1.6e-30 105.0 0.9 1.6e-30 105.0 0.9 2.2 2 0 0 2 2 2 1 Histidine kinase PAS PF00989.25 gi|21228017|ref|NP_633939.1| - 1.3e-16 60.6 0.0 3e-16 59.4 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|21228017|ref|NP_633939.1| - 6.8e-14 52.0 0.0 1.9e-13 50.6 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|21228017|ref|NP_633939.1| - 1e-09 38.6 0.0 1.9e-09 37.7 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|21228017|ref|NP_633939.1| - 6.9e-09 36.2 0.2 4.6e-08 33.5 0.2 2.3 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|21228017|ref|NP_633939.1| - 2.4e-08 33.8 0.0 1.2e-07 31.6 0.0 2.2 2 0 0 2 2 2 1 PAS domain PAS_3 PF08447.12 gi|21228017|ref|NP_633939.1| - 2.4e-05 24.5 0.0 7.3e-05 23.0 0.0 1.9 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 gi|21228017|ref|NP_633939.1| - 2.4e-05 24.3 0.0 5.5e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_7 PF12860.7 gi|21228017|ref|NP_633939.1| - 0.00016 21.8 0.0 0.0029 17.8 0.0 2.6 2 1 0 2 2 1 1 PAS fold PAS_10 PF13596.6 gi|21228017|ref|NP_633939.1| - 0.00018 22.0 0.0 0.00046 20.8 0.0 1.8 1 0 0 1 1 1 1 PAS domain HWE_HK PF07536.14 gi|21228017|ref|NP_633939.1| - 0.0028 18.3 0.5 0.0097 16.6 0.5 2.0 1 1 0 1 1 1 1 HWE histidine kinase Latarcin PF10279.9 gi|21228017|ref|NP_633939.1| - 0.055 13.9 0.0 49 4.4 0.0 3.6 2 1 0 2 2 2 0 Latarcin precursor HATPase_c_3 PF13589.6 gi|21228017|ref|NP_633939.1| - 0.056 13.3 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPOB_a PF14689.6 gi|21228017|ref|NP_633939.1| - 0.1 12.3 0.0 0.42 10.4 0.0 2.1 2 0 0 2 2 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain PknG_TPR PF16918.5 gi|21228017|ref|NP_633939.1| - 0.11 11.2 0.0 0.19 10.4 0.0 1.3 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat tRNA-synt_2 PF00152.20 gi|21228018|ref|NP_633940.1| - 1.6e-84 283.7 0.4 2e-84 283.4 0.4 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|21228018|ref|NP_633940.1| - 7.2e-14 51.5 0.1 1.4e-13 50.6 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|21228018|ref|NP_633940.1| - 7e-07 29.0 0.2 0.0041 16.6 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) DEAD_assoc PF08494.11 gi|21228019|ref|NP_633941.1| - 2.7e-33 115.4 0.0 5.3e-33 114.4 0.0 1.5 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|21228019|ref|NP_633941.1| - 6.1e-32 110.8 0.0 2.6e-31 108.7 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|21228019|ref|NP_633941.1| - 1.2e-22 80.3 1.1 1.6e-19 70.2 0.0 3.6 3 1 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|21228019|ref|NP_633941.1| - 5.6e-10 39.5 0.0 1.3e-09 38.3 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|21228019|ref|NP_633941.1| - 0.034 14.4 0.2 0.27 11.5 0.2 2.4 1 1 0 1 1 1 0 AAA domain FAT PF02259.23 gi|21228019|ref|NP_633941.1| - 0.038 13.2 0.0 0.064 12.5 0.0 1.2 1 0 0 1 1 1 0 FAT domain T4SS-DNA_transf PF02534.14 gi|21228019|ref|NP_633941.1| - 0.04 12.7 0.0 0.086 11.6 0.0 1.4 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer UvrD-helicase PF00580.21 gi|21228019|ref|NP_633941.1| - 0.047 13.2 0.0 0.22 11.0 0.0 1.9 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|21228019|ref|NP_633941.1| - 0.052 13.9 0.2 0.49 10.7 0.1 2.5 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|21228019|ref|NP_633941.1| - 0.069 12.7 0.0 0.25 10.9 0.0 2.0 2 1 0 2 2 2 0 AAA domain Zn-ribbon_8 PF09723.10 gi|21228019|ref|NP_633941.1| - 0.098 12.8 0.6 0.23 11.6 0.6 1.5 1 0 0 1 1 1 0 Zinc ribbon domain SNF2_N PF00176.23 gi|21228019|ref|NP_633941.1| - 0.11 11.2 0.0 0.16 10.6 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain SIR2_2 PF13289.6 gi|21228020|ref|NP_633942.1| - 4e-10 40.0 1.3 2.1e-09 37.7 0.0 2.8 3 0 0 3 3 3 1 SIR2-like domain IstB_IS21 PF01695.17 gi|21228020|ref|NP_633942.1| - 1.3e-05 25.1 0.2 4e-05 23.4 0.0 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein ResIII PF04851.15 gi|21228020|ref|NP_633942.1| - 0.029 14.4 0.2 0.029 14.4 0.2 2.8 3 1 0 3 3 3 0 Type III restriction enzyme, res subunit AAA PF00004.29 gi|21228020|ref|NP_633942.1| - 0.058 13.8 0.0 0.21 12.0 0.0 2.0 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) HicB_lk_antitox PF15919.5 gi|21228021|ref|NP_633943.1| - 2.9e-12 46.8 0.0 3.1e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF1902 PF08972.11 gi|21228021|ref|NP_633943.1| - 7.1e-06 25.9 0.0 7.4e-06 25.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) NTP_transf_2 PF01909.23 gi|21228022|ref|NP_633944.1| - 2.5e-18 66.1 0.3 2.9e-18 65.9 0.3 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|21228022|ref|NP_633944.1| - 1.9e-16 59.9 0.1 2.1e-16 59.8 0.1 1.0 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|21228022|ref|NP_633944.1| - 0.002 18.3 0.0 0.0021 18.2 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm PAC2 PF09754.9 gi|21228022|ref|NP_633944.1| - 0.13 12.3 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 PAC2 family DUF3467 PF11950.8 gi|21228023|ref|NP_633945.1| - 1.2e-05 25.4 0.3 1.6e-05 25.0 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3467) BssS PF13991.6 gi|21228023|ref|NP_633945.1| - 0.0027 17.7 0.3 0.012 15.6 0.0 2.0 1 1 1 2 2 2 1 BssS protein family HTH_Crp_2 PF13545.6 gi|21228024|ref|NP_633946.1| - 0.062 13.3 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 gi|21228024|ref|NP_633946.1| - 0.12 12.0 0.0 0.5 9.9 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_11 PF08279.12 gi|21228024|ref|NP_633946.1| - 0.12 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 HTH domain TrmB PF01978.19 gi|21228024|ref|NP_633946.1| - 0.14 12.1 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|21228024|ref|NP_633946.1| - 0.16 11.5 0.1 0.39 10.3 0.1 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding HicB_lk_antitox PF15919.5 gi|21228025|ref|NP_633947.1| - 1.6e-12 47.6 0.1 1.6e-12 47.6 0.1 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF1902 PF08972.11 gi|21228025|ref|NP_633947.1| - 6.6e-06 26.0 0.0 7.2e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) HicA_toxin PF07927.12 gi|21228026|ref|NP_633948.1| - 2.5e-20 72.2 0.1 3.1e-20 72.0 0.1 1.1 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, DUF1232 PF06803.12 gi|21228027|ref|NP_633949.1| - 2.7e-12 46.2 9.5 4.6e-12 45.5 9.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) Carbpep_Y_N PF05388.11 gi|21228027|ref|NP_633949.1| - 0.089 13.3 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Carboxypeptidase Y pro-peptide Filamin PF00630.19 gi|21228028|ref|NP_633950.1| - 0.00017 22.3 0.0 0.00023 21.9 0.0 1.1 1 0 0 1 1 1 1 Filamin/ABP280 repeat DUF5001 PF16392.5 gi|21228028|ref|NP_633950.1| - 0.0019 18.1 0.0 0.0029 17.5 0.0 1.3 1 0 0 1 1 1 1 Ig-like domain BclA_C PF18573.1 gi|21228028|ref|NP_633950.1| - 0.013 15.4 0.1 0.028 14.3 0.1 1.5 2 0 0 2 2 2 0 BclA C-terminal domain VASt PF16016.5 gi|21228028|ref|NP_633950.1| - 0.016 15.6 0.0 0.019 15.4 0.0 1.1 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain PPC PF04151.15 gi|21228028|ref|NP_633950.1| - 0.031 15.4 0.1 0.078 14.1 0.1 1.7 1 1 0 1 1 1 0 Bacterial pre-peptidase C-terminal domain HA1 PF18239.1 gi|21228028|ref|NP_633950.1| - 0.15 12.0 0.1 0.31 10.9 0.0 1.5 1 1 0 1 1 1 0 Hemagglutinin I NosD PF05048.13 gi|21228029|ref|NP_633951.1| - 4.4e-127 422.3 149.5 2.8e-47 161.0 34.7 5.2 2 2 3 5 5 5 5 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21228029|ref|NP_633951.1| - 3.6e-55 186.1 142.1 6.6e-19 68.3 27.5 5.8 2 2 2 5 5 5 5 Right handed beta helix region Big_6 PF17936.1 gi|21228029|ref|NP_633951.1| - 0.9 9.9 5.1 1.5 9.1 0.0 3.8 3 1 1 4 4 4 0 Bacterial Ig domain Acetyltransf_4 PF13420.7 gi|21228030|ref|NP_633952.1| - 6.5e-16 58.8 0.0 7.5e-16 58.6 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21228030|ref|NP_633952.1| - 2.9e-14 53.3 0.0 3.5e-14 53.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|21228030|ref|NP_633952.1| - 2.9e-10 41.0 0.0 4e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21228030|ref|NP_633952.1| - 5.6e-09 36.0 0.0 7e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|21228030|ref|NP_633952.1| - 1.5e-08 34.9 0.0 2.7e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21228030|ref|NP_633952.1| - 0.0073 16.3 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|21228030|ref|NP_633952.1| - 0.033 14.3 0.0 0.077 13.1 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain TaqI_C PF12950.7 gi|21228031|ref|NP_633953.1| - 0.001 19.1 0.0 0.0025 17.9 0.0 1.7 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain Transposase_20 PF02371.16 gi|21228032|ref|NP_633954.1| - 1.4e-28 99.0 0.0 3.6e-28 97.7 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|21228032|ref|NP_633954.1| - 9.1e-20 71.1 0.2 2e-19 70.0 0.2 1.6 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.12 gi|21228032|ref|NP_633954.1| - 0.027 14.8 0.0 0.082 13.2 0.0 1.8 1 0 0 1 1 1 0 Orthopoxvirus F14 protein 5_3_exonuc PF01367.20 gi|21228032|ref|NP_633954.1| - 0.21 12.2 2.7 3.3 8.4 0.7 3.3 2 1 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold HisKA_7TM PF16927.5 gi|21228033|ref|NP_633955.1| - 1.5e-49 169.0 18.9 2e-49 168.6 18.9 1.2 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HATPase_c PF02518.26 gi|21228033|ref|NP_633955.1| - 1.8e-12 47.8 0.1 4.8e-12 46.4 0.1 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|21228033|ref|NP_633955.1| - 3e-10 40.1 0.0 1.6e-09 37.8 0.0 2.2 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|21228033|ref|NP_633955.1| - 4.5e-08 33.3 0.0 1.9e-07 31.3 0.0 2.1 1 1 0 1 1 1 1 PAS domain PAS_8 PF13188.7 gi|21228033|ref|NP_633955.1| - 1e-06 28.6 0.0 2.7e-06 27.3 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|21228033|ref|NP_633955.1| - 1.1e-05 25.6 0.0 0.00019 21.6 0.0 2.4 1 1 0 1 1 1 1 PAS fold SPOB_a PF14689.6 gi|21228033|ref|NP_633955.1| - 0.00024 20.7 0.3 0.00099 18.8 0.2 1.9 2 0 0 2 2 2 1 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_2 PF13581.6 gi|21228033|ref|NP_633955.1| - 0.00044 20.2 0.0 0.0013 18.7 0.0 1.7 1 1 1 2 2 2 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|21228033|ref|NP_633955.1| - 0.029 14.2 0.0 0.061 13.2 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase URO-D PF01208.17 gi|21228034|ref|NP_633956.1| - 1.8e-81 274.0 0.0 2e-81 273.8 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) EamA PF00892.20 gi|21228035|ref|NP_633957.1| - 5.6e-31 107.5 33.5 2e-18 66.9 8.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|21228035|ref|NP_633957.1| - 5.5e-06 25.9 6.0 7.7e-06 25.4 5.7 1.4 1 1 0 1 1 1 1 Triose-phosphate Transporter family PUNUT PF16913.5 gi|21228035|ref|NP_633957.1| - 0.00077 18.8 6.0 0.00077 18.8 6.0 1.6 1 1 0 1 1 1 1 Purine nucleobase transmembrane transport SLC35F PF06027.12 gi|21228035|ref|NP_633957.1| - 0.015 14.8 10.7 0.031 13.8 4.2 2.6 1 1 1 2 2 2 0 Solute carrier family 35 YjcB PF15940.5 gi|21228035|ref|NP_633957.1| - 0.2 11.9 6.2 1.6 9.0 0.0 3.8 3 1 1 4 4 4 0 Family of unknown function Wzy_C_2 PF11846.8 gi|21228035|ref|NP_633957.1| - 1.4 8.8 5.2 1.8 8.4 0.3 2.5 2 1 1 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal Cupin_2 PF07883.11 gi|21228036|ref|NP_633958.1| - 1.2e-09 37.7 0.1 2e-09 37.0 0.1 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|21228036|ref|NP_633958.1| - 4.6e-05 23.3 0.3 0.0062 16.4 0.0 2.8 3 0 0 3 3 3 1 AraC-like ligand binding domain ARD PF03079.14 gi|21228036|ref|NP_633958.1| - 0.00011 22.5 0.3 0.00024 21.3 0.0 1.7 2 0 0 2 2 2 1 ARD/ARD' family Cupin_3 PF05899.12 gi|21228036|ref|NP_633958.1| - 0.00059 19.5 0.1 0.0011 18.7 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 gi|21228036|ref|NP_633958.1| - 0.0011 18.6 0.0 0.0017 18.0 0.0 1.2 1 0 0 1 1 1 1 Cupin FliG_M PF14841.6 gi|21228036|ref|NP_633958.1| - 0.0054 16.9 0.3 0.86 9.9 0.0 2.3 2 0 0 2 2 2 1 FliG middle domain PRA-PH PF01503.17 gi|21228036|ref|NP_633958.1| - 0.044 14.2 0.5 0.84 10.1 0.4 2.2 2 0 0 2 2 2 0 Phosphoribosyl-ATP pyrophosphohydrolase EutQ PF06249.12 gi|21228036|ref|NP_633958.1| - 0.053 13.3 0.0 0.38 10.5 0.0 2.0 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutQ Cupin_6 PF12852.7 gi|21228036|ref|NP_633958.1| - 0.054 13.2 0.0 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 Cupin AraC_binding_2 PF14525.6 gi|21228036|ref|NP_633958.1| - 0.11 12.1 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 AraC-binding-like domain Acetyltransf_18 PF18014.1 gi|21228037|ref|NP_633959.1| - 4.1e-33 113.9 0.0 4.1e-32 110.6 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21228037|ref|NP_633959.1| - 1.2e-10 41.6 0.1 3.6e-08 33.6 0.0 2.4 2 1 0 2 2 2 2 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|21228037|ref|NP_633959.1| - 3.3e-08 33.5 0.0 0.00012 22.0 0.0 2.3 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|21228037|ref|NP_633959.1| - 1.2e-05 25.6 0.0 3e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21228037|ref|NP_633959.1| - 0.045 13.9 0.0 0.26 11.4 0.0 2.2 1 1 1 2 2 2 0 GCN5-related N-acetyl-transferase PD40 PF07676.12 gi|21228038|ref|NP_633960.1| - 6.5e-09 35.5 13.5 0.71 9.9 0.1 7.1 7 1 0 7 7 7 5 WD40-like Beta Propeller Repeat DUF5050 PF16472.5 gi|21228038|ref|NP_633960.1| - 1.2e-08 34.6 5.9 7.3e-05 22.2 4.8 2.7 1 1 1 2 2 2 2 Domain of unknown function (DUF5050) DPPIV_N PF00930.21 gi|21228038|ref|NP_633960.1| - 7.4e-06 25.0 1.7 0.29 9.9 0.1 4.3 1 1 3 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF3155 PF11352.8 gi|21228038|ref|NP_633960.1| - 0.0056 17.1 0.1 5 7.6 0.0 3.4 3 1 1 4 4 4 1 Protein of unknown function (DUF3155) Pectate_lyase22 PF14583.6 gi|21228038|ref|NP_633960.1| - 0.03 13.0 0.2 0.34 9.6 0.1 2.3 2 1 0 2 2 2 0 Oligogalacturonate lyase SUKH_6 PF14568.6 gi|21228038|ref|NP_633960.1| - 0.25 11.8 9.6 9.5 6.7 0.4 4.5 1 1 2 3 3 3 0 SMI1-KNR4 cell-wall PNGaseA PF12222.8 gi|21228038|ref|NP_633960.1| - 0.29 10.0 3.7 1.4 7.7 0.8 2.3 1 1 0 2 2 2 0 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A PQQ PF01011.21 gi|21228038|ref|NP_633960.1| - 3 7.9 5.7 5.1 7.2 0.0 4.3 6 0 0 6 6 6 0 PQQ enzyme repeat zf-FLZ PF04570.14 gi|21228038|ref|NP_633960.1| - 8.8 5.9 13.9 70 3.0 0.1 5.7 6 0 0 6 6 6 0 zinc-finger of the FCS-type, C2-C2 DUF1949 PF09186.11 gi|21228039|ref|NP_633961.1| - 2.2e-11 43.5 0.0 3.4e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1949) UPF0029 PF01205.19 gi|21228039|ref|NP_633961.1| - 7.1e-09 36.0 0.3 1.3e-08 35.1 0.3 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF5370 PF17340.2 gi|21228039|ref|NP_633961.1| - 0.0035 17.2 2.7 0.0096 15.8 0.1 2.3 1 1 1 2 2 2 1 Family of unknown function (DUF5370) HC2 PF07382.11 gi|21228040|ref|NP_633962.1| - 0.063 13.3 0.0 0.08 13.0 0.0 1.1 1 0 0 1 1 1 0 Histone H1-like nucleoprotein HC2 PA26 PF04636.13 gi|21228040|ref|NP_633962.1| - 8.5 5.2 11.1 10 4.9 11.1 1.0 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SBP_bac_3 PF00497.20 gi|21228041|ref|NP_633963.1| - 7.9e-67 225.0 0.3 1.1e-66 224.5 0.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 gi|21228041|ref|NP_633963.1| - 4.8e-11 42.9 0.1 6.8e-09 35.9 0.0 3.0 2 1 0 2 2 2 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 gi|21228041|ref|NP_633963.1| - 0.00069 19.6 0.8 0.19 11.6 0.1 2.5 1 1 2 3 3 3 2 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|21228041|ref|NP_633963.1| - 0.0054 16.4 0.1 0.014 15.0 0.1 1.7 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein B12-binding PF02310.19 gi|21228041|ref|NP_633963.1| - 0.07 13.2 0.1 0.39 10.8 0.1 2.3 1 1 1 2 2 2 0 B12 binding domain BPD_transp_1 PF00528.22 gi|21228042|ref|NP_633964.1| - 3.3e-22 79.1 5.5 3.3e-22 79.1 5.5 1.4 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|21228043|ref|NP_633965.1| - 1e-36 126.4 0.0 1.3e-36 126.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21228043|ref|NP_633965.1| - 2.9e-14 53.6 0.0 1.6e-07 31.5 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21228043|ref|NP_633965.1| - 1.3e-09 37.8 0.1 8.4e-06 25.4 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|21228043|ref|NP_633965.1| - 1.9e-05 24.6 0.0 0.00099 18.9 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|21228043|ref|NP_633965.1| - 0.00033 20.4 0.0 0.00065 19.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|21228043|ref|NP_633965.1| - 0.00045 20.5 0.0 0.0029 17.9 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.6 gi|21228043|ref|NP_633965.1| - 0.00099 17.9 0.0 0.0071 15.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 gi|21228043|ref|NP_633965.1| - 0.001 17.9 0.1 0.59 8.9 0.0 2.9 2 1 0 2 2 2 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 gi|21228043|ref|NP_633965.1| - 0.0019 18.1 0.1 0.0029 17.5 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|21228043|ref|NP_633965.1| - 0.003 18.0 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|21228043|ref|NP_633965.1| - 0.0039 17.7 0.0 0.0057 17.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|21228043|ref|NP_633965.1| - 0.0093 16.5 0.0 0.019 15.5 0.0 1.6 2 0 0 2 2 1 1 AAA domain AAA_33 PF13671.6 gi|21228043|ref|NP_633965.1| - 0.01 16.0 0.0 0.02 15.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|21228043|ref|NP_633965.1| - 0.013 14.6 0.0 0.02 14.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_24 PF13479.6 gi|21228043|ref|NP_633965.1| - 0.017 14.8 0.0 0.034 13.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|21228043|ref|NP_633965.1| - 0.018 14.9 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain SbcCD_C PF13558.6 gi|21228043|ref|NP_633965.1| - 0.026 14.8 0.1 0.41 10.9 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit G-alpha PF00503.20 gi|21228043|ref|NP_633965.1| - 0.033 13.4 0.0 0.064 12.4 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit AAA PF00004.29 gi|21228043|ref|NP_633965.1| - 0.037 14.5 0.2 0.75 10.2 0.2 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|21228043|ref|NP_633965.1| - 0.039 13.7 0.0 0.054 13.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|21228043|ref|NP_633965.1| - 0.041 13.8 0.0 0.079 12.9 0.0 1.4 1 0 0 1 1 1 0 NACHT domain IIGP PF05049.13 gi|21228043|ref|NP_633965.1| - 0.059 12.4 0.1 0.082 12.0 0.1 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA_25 PF13481.6 gi|21228043|ref|NP_633965.1| - 0.059 12.9 0.0 0.18 11.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 gi|21228043|ref|NP_633965.1| - 0.096 12.1 0.0 2.7 7.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein IstB_IS21 PF01695.17 gi|21228043|ref|NP_633965.1| - 0.12 12.1 0.0 0.44 10.3 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein CobU PF02283.16 gi|21228043|ref|NP_633965.1| - 0.17 11.5 0.0 7.3 6.1 0.0 2.2 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_28 PF13521.6 gi|21228043|ref|NP_633965.1| - 0.19 12.0 0.0 0.45 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain XdhC_CoxI PF02625.16 gi|21228043|ref|NP_633965.1| - 0.23 11.7 0.6 17 5.7 0.0 2.8 2 1 1 3 3 3 0 XdhC and CoxI family UbiA PF01040.18 gi|21228044|ref|NP_633966.1| - 1.2e-29 103.4 11.4 1.6e-29 103.0 11.4 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Radical_SAM PF04055.21 gi|21228046|ref|NP_633968.1| - 1.2e-10 42.0 0.0 1.9e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily DUF1848 PF08902.11 gi|21228046|ref|NP_633968.1| - 0.0027 17.5 0.8 0.011 15.4 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1848) Fer4_12 PF13353.6 gi|21228046|ref|NP_633968.1| - 0.062 13.6 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF5131 PF07505.11 gi|21228046|ref|NP_633968.1| - 0.083 12.3 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF5131) ParB PF08775.10 gi|21228046|ref|NP_633968.1| - 0.1 13.1 1.0 0.17 12.4 0.1 1.8 2 0 0 2 2 2 0 ParB family Fer4_14 PF13394.6 gi|21228046|ref|NP_633968.1| - 0.16 12.1 1.9 0.29 11.3 1.9 1.6 1 1 0 1 1 1 0 4Fe-4S single cluster domain CMD PF02627.20 gi|21228047|ref|NP_633969.1| - 0.001 19.1 0.0 0.0014 18.7 0.0 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Glycos_transf_1 PF00534.20 gi|21228048|ref|NP_633970.1| - 4.9e-39 133.6 0.1 9.4e-39 132.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21228048|ref|NP_633970.1| - 7.7e-27 94.4 0.1 2.2e-26 92.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21228048|ref|NP_633970.1| - 3e-26 92.5 0.0 6e-24 84.9 0.0 2.2 2 0 0 2 2 2 2 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|21228048|ref|NP_633970.1| - 2.6e-19 70.2 0.0 3.9e-19 69.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|21228048|ref|NP_633970.1| - 1.1e-11 44.9 0.0 2.6e-11 43.7 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|21228048|ref|NP_633970.1| - 1.5e-08 34.9 0.0 3e-08 33.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 PIGA PF08288.12 gi|21228048|ref|NP_633970.1| - 1.4e-06 28.8 0.0 3.3e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 PIGA (GPI anchor biosynthesis) Glyco_transf_5 PF08323.11 gi|21228048|ref|NP_633970.1| - 0.0043 16.8 0.1 0.031 14.0 0.0 2.5 2 1 1 3 3 3 1 Starch synthase catalytic domain LPG_synthase_TM PF03706.13 gi|21228049|ref|NP_633971.1| - 1.5e-38 133.0 30.3 1.9e-38 132.7 30.3 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Aldo_ket_red PF00248.21 gi|21228050|ref|NP_633972.1| - 1.2e-37 129.8 0.0 4.2e-36 124.7 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|21228050|ref|NP_633972.1| - 7.1e-12 45.7 9.6 1.3e-11 44.9 9.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21228050|ref|NP_633972.1| - 1.2e-10 41.3 8.6 2e-10 40.7 8.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21228050|ref|NP_633972.1| - 8e-07 29.4 8.0 1.5e-06 28.6 8.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21228050|ref|NP_633972.1| - 6.7e-06 26.1 8.4 1.2e-05 25.3 8.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21228050|ref|NP_633972.1| - 7.1e-05 23.3 9.9 0.00019 21.9 10.1 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21228050|ref|NP_633972.1| - 0.0014 18.4 11.7 0.0032 17.2 3.3 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21228050|ref|NP_633972.1| - 0.0054 17.5 3.3 0.29 12.0 0.3 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21228050|ref|NP_633972.1| - 0.0072 16.5 5.9 0.81 9.9 0.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21228050|ref|NP_633972.1| - 0.0072 16.4 6.0 0.69 10.1 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21228050|ref|NP_633972.1| - 0.01 16.7 9.4 0.03 15.2 9.4 1.8 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_20 PF14691.6 gi|21228050|ref|NP_633972.1| - 0.035 13.9 8.5 0.13 12.0 2.0 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Filament_head PF04732.14 gi|21228050|ref|NP_633972.1| - 0.18 12.7 0.0 0.33 11.8 0.0 1.4 1 0 0 1 1 1 0 Intermediate filament head (DNA binding) region Fer4_6 PF12837.7 gi|21228050|ref|NP_633972.1| - 0.31 11.2 12.0 0.12 12.5 1.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21228050|ref|NP_633972.1| - 0.39 11.3 18.3 0.099 13.2 5.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21228050|ref|NP_633972.1| - 0.74 10.9 13.8 0.18 12.8 3.8 2.5 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21228050|ref|NP_633972.1| - 7.2 6.9 18.0 1.4 9.2 4.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Methyltransf_31 PF13847.6 gi|21228051|ref|NP_633973.1| - 3.5e-30 104.8 0.0 5.6e-30 104.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21228051|ref|NP_633973.1| - 1.3e-26 93.1 0.0 4.3e-26 91.4 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228051|ref|NP_633973.1| - 2e-25 89.3 0.0 2.2e-24 86.0 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21228051|ref|NP_633973.1| - 5.6e-21 75.1 0.0 1e-20 74.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21228051|ref|NP_633973.1| - 3.1e-20 72.5 0.0 4.1e-20 72.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|21228051|ref|NP_633973.1| - 7.8e-20 71.4 0.0 1e-19 71.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|21228051|ref|NP_633973.1| - 9e-12 44.8 0.1 6.9e-11 41.9 0.1 2.1 1 1 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|21228051|ref|NP_633973.1| - 1.5e-11 44.2 0.0 2.9e-11 43.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|21228051|ref|NP_633973.1| - 7.9e-08 32.3 0.0 1.2e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|21228051|ref|NP_633973.1| - 4.5e-07 29.4 0.0 5.7e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase NodS PF05401.11 gi|21228051|ref|NP_633973.1| - 6.7e-07 29.1 0.0 9.3e-07 28.7 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.13 gi|21228051|ref|NP_633973.1| - 1.8e-06 27.6 0.0 4.3e-05 23.1 0.0 2.1 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_2 PF00891.18 gi|21228051|ref|NP_633973.1| - 8e-06 25.3 0.0 1e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain TehB PF03848.14 gi|21228051|ref|NP_633973.1| - 8.1e-06 25.4 0.0 4.1e-05 23.1 0.0 1.9 2 0 0 2 2 2 1 Tellurite resistance protein TehB TPMT PF05724.11 gi|21228051|ref|NP_633973.1| - 1.7e-05 24.6 0.0 2.8e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_9 PF08003.11 gi|21228051|ref|NP_633973.1| - 3.3e-05 23.0 0.0 5.4e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_18 PF12847.7 gi|21228051|ref|NP_633973.1| - 0.00031 20.7 0.0 0.00059 19.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|21228051|ref|NP_633973.1| - 0.00043 20.1 0.0 0.0006 19.6 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein GCD14 PF08704.10 gi|21228051|ref|NP_633973.1| - 0.0015 18.3 0.0 0.0024 17.6 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit CheR PF01739.18 gi|21228051|ref|NP_633973.1| - 0.0016 18.0 0.0 0.44 10.0 0.0 2.3 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain tRNA_U5-meth_tr PF05958.11 gi|21228051|ref|NP_633973.1| - 0.0021 17.1 0.0 0.0038 16.3 0.0 1.4 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase UPF0020 PF01170.18 gi|21228051|ref|NP_633973.1| - 0.0028 17.4 0.0 0.0061 16.3 0.0 1.6 2 0 0 2 2 1 1 Putative RNA methylase family UPF0020 Methyltransf_24 PF13578.6 gi|21228051|ref|NP_633973.1| - 0.006 17.6 0.0 0.014 16.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|21228051|ref|NP_633973.1| - 0.0082 15.7 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW RrnaAD PF00398.20 gi|21228051|ref|NP_633973.1| - 0.0087 15.2 0.0 0.02 14.0 0.0 1.5 1 1 0 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltr_RsmB-F PF01189.17 gi|21228051|ref|NP_633973.1| - 0.012 15.3 0.0 0.043 13.5 0.0 1.8 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F Methyltransf_32 PF13679.6 gi|21228051|ref|NP_633973.1| - 0.014 15.4 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_PK PF05891.12 gi|21228051|ref|NP_633973.1| - 0.014 14.9 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase ADH_zinc_N PF00107.26 gi|21228051|ref|NP_633973.1| - 0.016 15.2 0.0 0.031 14.3 0.0 1.5 1 1 0 1 1 1 0 Zinc-binding dehydrogenase Methyltransf_15 PF09445.10 gi|21228051|ref|NP_633973.1| - 0.023 14.3 0.0 0.034 13.7 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase NAS PF03059.16 gi|21228051|ref|NP_633973.1| - 0.027 13.8 0.0 0.037 13.4 0.0 1.2 1 0 0 1 1 1 0 Nicotianamine synthase protein Methyltransf_8 PF05148.15 gi|21228051|ref|NP_633973.1| - 0.028 14.2 0.0 0.056 13.3 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase N2227 PF07942.12 gi|21228051|ref|NP_633973.1| - 0.07 12.3 0.0 5.2 6.2 0.0 2.1 1 1 1 2 2 2 0 N2227-like protein DUF938 PF06080.12 gi|21228051|ref|NP_633973.1| - 0.089 12.5 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_16 PF10294.9 gi|21228051|ref|NP_633973.1| - 0.16 11.7 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Catalase PF00199.19 gi|21228052|ref|NP_633974.1| - 1.1e-179 597.5 0.2 1.5e-179 597.1 0.2 1.1 1 0 0 1 1 1 1 Catalase Catalase_C PF18011.1 gi|21228052|ref|NP_633974.1| - 6.4e-23 81.1 0.1 9.9e-23 80.5 0.1 1.3 1 0 0 1 1 1 1 C-terminal domain found in long catalases Catalase-rel PF06628.12 gi|21228052|ref|NP_633974.1| - 4.1e-21 74.9 0.1 1e-20 73.7 0.1 1.7 1 0 0 1 1 1 1 Catalase-related immune-responsive DJ-1_PfpI PF01965.24 gi|21228052|ref|NP_633974.1| - 1.1e-17 64.3 0.2 1.6e-16 60.5 0.2 2.1 1 1 0 1 1 1 1 DJ-1/PfpI family Cation_efflux PF01545.21 gi|21228054|ref|NP_633976.1| - 3.8e-17 62.7 3.6 5.8e-17 62.1 3.6 1.3 1 0 0 1 1 1 1 Cation efflux family CrgA PF06781.12 gi|21228054|ref|NP_633976.1| - 0.07 13.2 0.1 0.28 11.3 0.0 2.0 2 0 0 2 2 2 0 Cell division protein CrgA Cation_ATPase_C PF00689.21 gi|21228054|ref|NP_633976.1| - 0.34 10.6 3.6 0.59 9.8 3.6 1.8 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus ZT_dimer PF16916.5 gi|21228055|ref|NP_633977.1| - 2.7e-20 72.3 0.4 5.6e-20 71.2 0.2 1.6 2 0 0 2 2 2 1 Dimerisation domain of Zinc Transporter Cation_efflux PF01545.21 gi|21228055|ref|NP_633977.1| - 1.3e-17 64.3 1.4 1.6e-17 63.9 1.4 1.1 1 0 0 1 1 1 1 Cation efflux family NifU_N PF01592.16 gi|21228056|ref|NP_633978.1| - 1.8e-41 141.3 0.0 3.1e-41 140.5 0.0 1.3 1 0 0 1 1 1 1 NifU-like N terminal domain FeS_assembly_P PF01883.19 gi|21228056|ref|NP_633978.1| - 3.4e-11 43.2 3.5 3.9e-11 43.0 1.8 2.0 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein Aminotran_5 PF00266.19 gi|21228057|ref|NP_633979.1| - 4.8e-69 233.1 0.0 6.1e-69 232.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|21228057|ref|NP_633979.1| - 1.3e-05 24.7 0.0 2.4e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|21228057|ref|NP_633979.1| - 0.00034 20.0 0.0 0.00047 19.5 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|21228057|ref|NP_633979.1| - 0.00061 18.4 0.1 0.0011 17.6 0.1 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|21228057|ref|NP_633979.1| - 0.0033 16.7 0.0 0.0045 16.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DUF2213 PF09979.9 gi|21228057|ref|NP_633979.1| - 0.03 14.3 0.0 0.05 13.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2213) SepSecS PF05889.13 gi|21228057|ref|NP_633979.1| - 0.041 12.6 0.0 0.065 11.9 0.0 1.3 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS DrsE_2 PF13686.6 gi|21228058|ref|NP_633980.1| - 3.1e-36 124.6 4.3 6.4e-21 74.9 0.6 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|21228058|ref|NP_633980.1| - 9.9e-07 29.1 0.0 1.5e-06 28.5 0.0 1.3 1 1 0 1 1 1 1 DsrE/DsrF-like family DUF3025 PF11227.8 gi|21228058|ref|NP_633980.1| - 0.11 12.3 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3025) BRICHOS PF04089.14 gi|21228058|ref|NP_633980.1| - 0.16 12.3 0.0 0.26 11.5 0.0 1.3 1 0 0 1 1 1 0 BRICHOS domain TusA PF01206.17 gi|21228059|ref|NP_633981.1| - 5.4e-20 71.0 0.2 5.9e-20 70.9 0.2 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA HIT PF01230.23 gi|21228060|ref|NP_633982.1| - 9.2e-32 109.7 0.0 1.1e-30 106.2 0.0 1.9 2 0 0 2 2 2 1 HIT domain DcpS_C PF11969.8 gi|21228060|ref|NP_633982.1| - 1e-17 64.6 0.0 1.8e-17 63.9 0.0 1.4 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|21228060|ref|NP_633982.1| - 0.0065 16.3 0.1 0.011 15.6 0.1 1.4 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 PAS_10 PF13596.6 gi|21228060|ref|NP_633982.1| - 0.073 13.7 0.1 0.14 12.7 0.1 1.4 1 0 0 1 1 1 0 PAS domain PQ-loop PF04193.14 gi|21228061|ref|NP_633983.1| - 1.8e-09 37.3 0.5 3e-09 36.5 0.5 1.4 1 0 0 1 1 1 1 PQ loop repeat MtN3_slv PF03083.16 gi|21228061|ref|NP_633983.1| - 3e-08 33.6 0.7 3.6e-08 33.3 0.7 1.3 1 1 0 1 1 1 1 Sugar efflux transporter for intercellular exchange LAB_N PF07578.11 gi|21228061|ref|NP_633983.1| - 0.0031 17.5 0.2 0.0043 17.1 0.2 1.2 1 0 0 1 1 1 1 Lipid A Biosynthesis N-terminal domain DUF2929 PF11151.8 gi|21228061|ref|NP_633983.1| - 0.084 13.2 1.4 0.21 11.9 0.0 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF2929) DUF3342 PF11822.8 gi|21228061|ref|NP_633983.1| - 0.16 12.1 0.0 0.24 11.6 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3342) DUF5518 PF17647.1 gi|21228062|ref|NP_633984.1| - 5.4e-10 39.4 26.2 6.3e-10 39.2 26.2 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5518) CARDB PF07705.11 gi|21228063|ref|NP_633985.1| - 1.6e-96 317.3 15.8 8.8e-26 90.1 0.0 4.4 4 0 0 4 4 4 4 CARDB DUF11 PF01345.18 gi|21228063|ref|NP_633985.1| - 1e-06 29.0 6.4 0.25 11.7 0.2 5.1 4 3 0 4 4 4 2 Domain of unknown function DUF11 Serglycin PF04360.12 gi|21228063|ref|NP_633985.1| - 0.016 15.2 1.5 0.04 13.8 1.5 1.6 1 0 0 1 1 1 0 Serglycin TRAP_beta PF05753.14 gi|21228063|ref|NP_633985.1| - 0.28 10.5 1.7 17 4.7 0.0 4.0 5 1 1 6 6 6 0 Translocon-associated protein beta (TRAPB) DUF824 PF05688.11 gi|21228063|ref|NP_633985.1| - 0.31 10.9 1.7 1.7 8.5 0.4 2.4 2 0 0 2 2 2 0 Salmonella repeat of unknown function (DUF824) NPCBM_assoc PF10633.9 gi|21228063|ref|NP_633985.1| - 0.81 10.0 3.6 18 5.6 0.4 4.0 3 1 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase tRNA-synt_1b PF00579.25 gi|21228065|ref|NP_633987.1| - 3.7e-56 190.6 0.0 4.5e-56 190.3 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.18 gi|21228065|ref|NP_633987.1| - 0.086 11.7 0.0 3 6.7 0.0 2.1 2 0 0 2 2 2 0 tRNA synthetases class I (K) Msg2_C PF12373.8 gi|21228065|ref|NP_633987.1| - 0.41 10.1 1.8 0.88 9.1 1.8 1.6 1 0 0 1 1 1 0 Major surface glycoprotein 2 C terminal Thg1 PF04446.12 gi|21228066|ref|NP_633988.1| - 2.4e-22 79.3 0.0 3.2e-22 78.9 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Thg1C PF14413.6 gi|21228066|ref|NP_633988.1| - 3.5e-07 30.4 0.1 4.8e-07 30.0 0.1 1.2 1 0 0 1 1 1 1 Thg1 C terminal domain PRC PF05239.16 gi|21228067|ref|NP_633989.1| - 1.2e-14 54.2 1.2 1.5e-14 53.8 1.2 1.1 1 0 0 1 1 1 1 PRC-barrel domain Ldh_1_N PF00056.23 gi|21228068|ref|NP_633990.1| - 3.7e-38 130.8 1.7 5.8e-38 130.2 1.7 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|21228068|ref|NP_633990.1| - 1.4e-30 106.4 0.0 2.1e-30 105.9 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 gi|21228068|ref|NP_633990.1| - 9.4e-05 22.0 1.7 0.00032 20.3 0.2 2.2 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase UDPG_MGDP_dh_N PF03721.14 gi|21228068|ref|NP_633990.1| - 0.00099 18.7 1.0 0.0032 17.1 1.0 1.8 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ThiF PF00899.21 gi|21228068|ref|NP_633990.1| - 0.054 12.8 0.0 0.1 11.9 0.0 1.4 1 0 0 1 1 1 0 ThiF family Shikimate_DH PF01488.20 gi|21228068|ref|NP_633990.1| - 0.11 12.5 0.1 0.25 11.4 0.1 1.7 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF2344 PF10105.9 gi|21228068|ref|NP_633990.1| - 0.12 12.3 0.0 0.23 11.3 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2344) F420_oxidored PF03807.17 gi|21228068|ref|NP_633990.1| - 0.2 12.3 2.5 0.33 11.6 0.2 2.5 3 1 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent RNase_H_2 PF13482.6 gi|21228069|ref|NP_633991.1| - 1.8e-35 122.4 0.0 2.8e-35 121.8 0.0 1.3 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|21228069|ref|NP_633991.1| - 9.8e-05 22.1 0.0 0.45 10.2 0.0 2.2 2 0 0 2 2 2 2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB GPI PF06560.11 gi|21228070|ref|NP_633992.1| - 1e-47 161.8 0.0 1.3e-47 161.4 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.11 gi|21228070|ref|NP_633992.1| - 0.00065 19.4 0.4 0.0033 17.1 0.3 2.4 2 1 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 gi|21228070|ref|NP_633992.1| - 0.0029 17.2 0.0 0.0052 16.4 0.0 1.4 1 0 0 1 1 1 1 Cupin ARD PF03079.14 gi|21228070|ref|NP_633992.1| - 0.085 13.0 0.2 0.29 11.3 0.0 1.9 2 0 0 2 2 2 0 ARD/ARD' family JmjC PF02373.22 gi|21228070|ref|NP_633992.1| - 0.15 12.5 0.0 0.3 11.5 0.0 1.5 1 0 0 1 1 1 0 JmjC domain, hydroxylase Ribosomal_L9_N PF01281.19 gi|21228070|ref|NP_633992.1| - 1.9 8.1 4.3 3 7.5 0.1 2.8 3 0 0 3 3 3 0 Ribosomal protein L9, N-terminal domain NRD1_2 PF01995.16 gi|21228071|ref|NP_633993.1| - 1.1e-98 329.3 0.6 1.2e-98 329.2 0.6 1.0 1 0 0 1 1 1 1 NrpR regulatory domains NRD1 and 2 DHHA1 PF02272.19 gi|21228072|ref|NP_633994.1| - 5.3e-19 69.0 1.2 1.4e-18 67.6 1.2 1.7 1 0 0 1 1 1 1 DHHA1 domain SelA PF03841.13 gi|21228072|ref|NP_633994.1| - 0.0067 15.5 0.0 0.012 14.6 0.0 1.4 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase DHH PF01368.20 gi|21228072|ref|NP_633994.1| - 0.1 12.8 0.1 0.2 11.9 0.1 1.5 1 0 0 1 1 1 0 DHH family TCRP1 PF14944.6 gi|21228074|ref|NP_633996.1| - 0.029 14.4 0.0 0.03 14.3 0.0 1.0 1 0 0 1 1 1 0 Tongue Cancer Chemotherapy Resistant Protein 1 DUF1699 PF08004.11 gi|21228075|ref|NP_633997.1| - 2.3e-61 205.2 2.1 2.6e-61 205.0 2.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Radical_SAM_C PF16199.5 gi|21228076|ref|NP_633998.1| - 3.6e-28 97.4 0.1 6.9e-28 96.5 0.1 1.5 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|21228076|ref|NP_633998.1| - 1.1e-17 64.9 0.0 3.2e-17 63.4 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|21228076|ref|NP_633998.1| - 6.3e-09 36.1 0.4 1.5e-08 34.8 0.4 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|21228076|ref|NP_633998.1| - 1e-06 28.7 0.1 2.5e-06 27.4 0.1 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|21228076|ref|NP_633998.1| - 0.00094 19.6 0.6 0.002 18.5 0.6 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain zinc_ribbon_4 PF13717.6 gi|21228076|ref|NP_633998.1| - 0.011 15.6 1.4 0.024 14.6 1.4 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|21228076|ref|NP_633998.1| - 0.018 14.8 1.7 0.059 13.1 1.7 1.8 1 0 0 1 1 1 0 zinc-ribbon domain RHH_8 PF17723.1 gi|21228076|ref|NP_633998.1| - 0.071 13.3 0.0 0.42 10.8 0.0 2.2 2 1 2 4 4 4 0 Ribbon-Helix-Helix transcriptional regulator family HMG_box_5 PF14887.6 gi|21228077|ref|NP_633999.1| - 0.047 13.7 0.1 0.098 12.6 0.1 1.5 1 0 0 1 1 1 0 HMG (high mobility group) box 5 S-layer PF07752.11 gi|21228078|ref|NP_634000.1| - 6.3e-157 520.3 31.0 5e-79 265.0 10.3 2.1 2 0 0 2 2 2 2 S-layer protein PGF-CTERM PF18204.1 gi|21228078|ref|NP_634000.1| - 5.8e-10 38.8 1.2 5.8e-10 38.8 1.2 1.8 2 0 0 2 2 2 1 PGF-CTERM motif PT PF04886.12 gi|21228078|ref|NP_634000.1| - 2.8e-05 23.6 16.2 4.8e-05 22.8 16.2 1.3 1 0 0 1 1 1 1 PT repeat Mtf2_C PF14061.6 gi|21228078|ref|NP_634000.1| - 0.014 15.6 0.0 8.3 6.7 0.0 2.5 2 0 0 2 2 2 0 Polycomb-like MTF2 factor 2 GPI-anchored PF10342.9 gi|21228078|ref|NP_634000.1| - 0.043 14.6 0.1 46 4.9 0.0 3.6 3 0 0 3 3 3 0 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family tRNA-synt_1c_C PF03950.18 gi|21228078|ref|NP_634000.1| - 0.06 13.2 9.0 6.2 6.7 0.2 3.7 4 0 0 4 4 4 0 tRNA synthetases class I (E and Q), anti-codon binding domain PrcB_C PF14343.6 gi|21228078|ref|NP_634000.1| - 0.57 10.4 7.4 11 6.3 0.0 4.4 5 0 0 5 5 5 0 PrcB C-terminal HmuY PF14064.6 gi|21228078|ref|NP_634000.1| - 1.2 9.3 3.7 42 4.3 0.3 3.6 2 2 0 2 2 2 0 HmuY protein DUF4367 PF14285.6 gi|21228079|ref|NP_634001.1| - 0.054 13.9 2.1 0.16 12.4 2.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4367) GXGXG PF01493.19 gi|21228080|ref|NP_634002.1| - 1e-10 41.5 14.9 0.00019 21.1 5.4 3.3 1 1 2 3 3 3 3 GXGXG motif Amidohydro_3 PF07969.11 gi|21228081|ref|NP_634003.1| - 2.1e-97 327.6 0.0 2.4e-97 327.4 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|21228081|ref|NP_634003.1| - 5.6e-05 22.6 0.0 0.0015 17.9 0.0 2.4 3 0 0 3 3 3 1 Amidohydrolase family Molybdopterin PF00384.22 gi|21228082|ref|NP_634004.1| - 1.2e-20 73.9 0.0 7.1e-20 71.4 0.0 2.1 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.16 gi|21228082|ref|NP_634004.1| - 0.021 14.8 0.2 0.06 13.3 0.2 1.7 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain Molydop_binding PF01568.21 gi|21228083|ref|NP_634005.1| - 2.4e-13 50.1 0.0 3.3e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Alkyl_sulf_dimr PF14863.6 gi|21228084|ref|NP_634006.1| - 2.6e-33 115.4 0.1 4.8e-33 114.5 0.1 1.4 1 0 0 1 1 1 1 Alkyl sulfatase dimerisation Alkyl_sulf_C PF14864.6 gi|21228084|ref|NP_634006.1| - 4e-14 53.0 0.1 7.9e-14 52.0 0.1 1.5 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal Lactamase_B PF00753.27 gi|21228084|ref|NP_634006.1| - 1.1e-11 45.1 0.2 2.4e-11 44.0 0.2 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily SCP2 PF02036.17 gi|21228084|ref|NP_634006.1| - 2.3e-10 40.9 0.1 5.8e-10 39.6 0.0 1.7 2 0 0 2 2 2 1 SCP-2 sterol transfer family Lactamase_B_2 PF12706.7 gi|21228084|ref|NP_634006.1| - 0.0074 15.8 0.3 0.014 14.9 0.3 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PKD PF00801.20 gi|21228085|ref|NP_634007.1| - 2.5e-71 235.5 75.2 1.7e-10 40.6 2.9 11.1 10 0 0 10 10 10 10 PKD domain Big_1 PF02369.16 gi|21228085|ref|NP_634007.1| - 6.3e-11 42.1 1.8 6.3e-11 42.1 1.8 6.4 8 0 0 8 8 8 1 Bacterial Ig-like domain (group 1) PKD_3 PF16820.5 gi|21228085|ref|NP_634007.1| - 0.00027 20.6 29.5 1.2 8.9 0.0 9.9 11 0 0 11 11 11 2 PKD-like domain Invasin_D3 PF09134.10 gi|21228085|ref|NP_634007.1| - 0.00034 20.8 0.7 0.00034 20.8 0.7 8.7 10 0 0 10 10 10 2 Invasin, domain 3 MG4 PF17789.1 gi|21228085|ref|NP_634007.1| - 0.00077 19.6 0.7 0.06 13.5 0.0 3.7 2 0 0 2 2 2 1 Macroglobulin domain MG4 MoaF PF10703.9 gi|21228085|ref|NP_634007.1| - 0.91 9.5 8.5 22 5.0 0.0 5.7 7 0 0 7 7 7 0 MoaF N-terminal domain Hemerythrin PF01814.23 gi|21228086|ref|NP_634008.1| - 6.4e-15 55.9 6.1 8.8e-15 55.5 6.1 1.2 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain OmpH PF03938.14 gi|21228086|ref|NP_634008.1| - 0.045 14.1 5.7 0.098 13.0 5.7 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Seryl_tRNA_N PF02403.22 gi|21228086|ref|NP_634008.1| - 0.15 12.3 11.5 0.38 11.0 10.0 2.2 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Mod_r PF07200.13 gi|21228086|ref|NP_634008.1| - 0.96 9.5 14.3 1.6 8.8 14.3 1.3 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein DUF349 PF03993.12 gi|21228086|ref|NP_634008.1| - 7.7 6.9 13.2 5 7.5 2.8 3.0 2 1 0 2 2 2 0 Domain of Unknown Function (DUF349) Hemerythrin PF01814.23 gi|21228087|ref|NP_634009.1| - 2.5e-13 50.8 8.2 4.4e-13 50.0 8.2 1.4 1 1 0 1 1 1 1 Hemerythrin HHE cation binding domain PRA-PH PF01503.17 gi|21228087|ref|NP_634009.1| - 0.99 9.9 5.2 0.52 10.8 1.0 2.2 2 0 0 2 2 2 0 Phosphoribosyl-ATP pyrophosphohydrolase PhoU PF01895.19 gi|21228088|ref|NP_634010.1| - 1.2e-22 80.2 13.1 2.6e-20 72.7 2.0 3.4 3 1 0 3 3 3 2 PhoU domain MazE_antitoxin PF04014.18 gi|21228088|ref|NP_634010.1| - 0.00034 20.5 0.0 0.00088 19.1 0.0 1.7 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin KORA PF16509.5 gi|21228088|ref|NP_634010.1| - 0.037 14.3 0.4 39 4.6 0.0 3.3 3 0 0 3 3 3 0 TrfB plasmid transcriptional repressor HAMP PF00672.25 gi|21228088|ref|NP_634010.1| - 0.058 13.8 0.1 4.5 7.7 0.0 2.7 2 0 0 2 2 2 0 HAMP domain DDE_Tnp_IS1 PF03400.13 gi|21228089|ref|NP_634011.1| - 5.9e-06 26.6 0.0 8.6e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 IS1 transposase rve_3 PF13683.6 gi|21228089|ref|NP_634011.1| - 9.1e-05 22.2 0.1 0.00019 21.1 0.1 1.5 1 0 0 1 1 1 1 Integrase core domain HTH_29 PF13551.6 gi|21228090|ref|NP_634012.1| - 0.052 13.6 0.0 0.096 12.7 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_23 PF13384.6 gi|21228090|ref|NP_634012.1| - 0.086 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Otopetrin PF03189.13 gi|21228091|ref|NP_634013.1| - 0.00072 18.5 0.1 0.00072 18.5 0.1 1.0 1 0 0 1 1 1 1 Otopetrin DUF2207 PF09972.9 gi|21228091|ref|NP_634013.1| - 0.01 14.6 0.1 0.014 14.2 0.1 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1129 PF06570.11 gi|21228091|ref|NP_634013.1| - 0.028 13.9 1.0 0.036 13.5 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Consortin_C PF15281.6 gi|21228091|ref|NP_634013.1| - 0.069 13.1 0.0 0.077 13.0 0.0 1.2 1 0 0 1 1 1 0 Consortin C-terminus Orf78 PF06024.12 gi|21228091|ref|NP_634013.1| - 0.076 13.3 0.1 0.076 13.3 0.1 2.0 1 1 1 2 2 2 0 Orf78 (ac78) GET2 PF08690.10 gi|21228091|ref|NP_634013.1| - 0.087 12.5 0.1 0.098 12.3 0.1 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 Bac_export_2 PF01312.19 gi|21228091|ref|NP_634013.1| - 0.09 12.0 1.1 0.12 11.6 1.1 1.1 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family DUF4396 PF14342.6 gi|21228091|ref|NP_634013.1| - 0.091 13.1 1.5 0.11 12.9 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4396) RseC_MucC PF04246.12 gi|21228091|ref|NP_634013.1| - 1.1 9.2 3.5 1.6 8.7 3.5 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Alph_Pro_TM PF09608.10 gi|21228092|ref|NP_634014.1| - 0.0035 17.2 0.0 0.0063 16.4 0.0 1.5 1 0 0 1 1 1 1 Putative transmembrane protein (Alph_Pro_TM) DUF3324 PF11797.8 gi|21228092|ref|NP_634014.1| - 0.014 15.4 0.1 0.037 14.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function C-terminal (DUF3324) DUF2135 PF09906.9 gi|21228092|ref|NP_634014.1| - 0.069 13.5 0.0 0.25 11.7 0.0 1.9 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2135) DUF4832 PF16116.5 gi|21228093|ref|NP_634015.1| - 0.0002 21.3 0.3 0.00059 19.8 0.2 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4832) CARDB PF07705.11 gi|21228093|ref|NP_634015.1| - 0.00098 19.3 2.4 0.0017 18.6 0.8 2.0 2 0 0 2 2 2 1 CARDB DUF1659 PF07872.11 gi|21228093|ref|NP_634015.1| - 0.03 14.0 0.0 0.066 12.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1659) Integrin_alpha2 PF08441.12 gi|21228093|ref|NP_634015.1| - 0.034 13.0 0.2 0.051 12.5 0.2 1.1 1 0 0 1 1 1 0 Integrin alpha Agarase_CBM PF17992.1 gi|21228093|ref|NP_634015.1| - 0.08 12.5 1.3 0.75 9.3 0.3 2.6 1 1 1 2 2 2 0 Agarase CBM like domain CtaG_Cox11 PF04442.14 gi|21228093|ref|NP_634015.1| - 0.15 12.1 0.1 0.29 11.1 0.1 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 CBM49 PF09478.10 gi|21228093|ref|NP_634015.1| - 0.15 12.4 1.0 1.1 9.6 0.2 2.3 2 0 0 2 2 2 0 Carbohydrate binding domain CBM49 ABC2_membrane PF01061.24 gi|21228095|ref|NP_634017.1| - 5.1e-31 107.7 18.4 7.9e-31 107.1 18.4 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|21228095|ref|NP_634017.1| - 4.6e-12 45.7 23.0 5.5e-12 45.4 23.0 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|21228096|ref|NP_634018.1| - 6.4e-29 101.2 0.0 1e-28 100.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21228096|ref|NP_634018.1| - 2.5e-09 37.4 0.0 1e-05 25.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|21228096|ref|NP_634018.1| - 4e-05 24.2 0.0 8.3e-05 23.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|21228096|ref|NP_634018.1| - 0.00046 20.0 0.1 0.0012 18.7 0.0 1.7 2 1 1 3 3 3 1 AAA ATPase domain AAA_29 PF13555.6 gi|21228096|ref|NP_634018.1| - 0.00055 19.6 0.1 0.0019 17.9 0.1 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain KdpD PF02702.17 gi|21228096|ref|NP_634018.1| - 0.0054 16.2 0.0 0.013 15.0 0.0 1.5 1 1 0 2 2 2 1 Osmosensitive K+ channel His kinase sensor domain MukB PF04310.12 gi|21228096|ref|NP_634018.1| - 0.021 14.6 0.2 0.052 13.4 0.2 1.7 1 1 0 1 1 1 0 MukB N-terminal SMC_N PF02463.19 gi|21228096|ref|NP_634018.1| - 0.029 13.8 0.0 0.31 10.4 0.0 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 gi|21228096|ref|NP_634018.1| - 0.033 13.8 0.1 0.12 12.0 0.0 1.8 1 1 1 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 gi|21228096|ref|NP_634018.1| - 0.051 13.3 0.0 0.3 10.7 0.0 1.9 1 1 0 1 1 1 0 Thymidylate kinase AAA_PrkA PF08298.11 gi|21228096|ref|NP_634018.1| - 0.074 12.0 0.0 0.13 11.2 0.0 1.4 1 0 0 1 1 1 0 PrkA AAA domain RsgA_GTPase PF03193.16 gi|21228096|ref|NP_634018.1| - 0.11 12.4 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase CbiQ PF02361.16 gi|21228097|ref|NP_634019.1| - 1.8e-24 86.6 11.3 1.8e-24 86.6 11.3 1.5 2 0 0 2 2 2 1 Cobalt transport protein ABC_tran PF00005.27 gi|21228098|ref|NP_634020.1| - 1.9e-54 183.9 0.1 1.2e-26 93.9 0.1 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|21228098|ref|NP_634020.1| - 7.8e-11 42.3 3.7 0.0022 17.9 0.1 4.3 2 2 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21228098|ref|NP_634020.1| - 1.1e-10 41.1 0.5 0.0005 19.7 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain SMC_N PF02463.19 gi|21228098|ref|NP_634020.1| - 3.6e-10 39.6 1.1 0.00086 18.8 0.1 3.1 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|21228098|ref|NP_634020.1| - 1.8e-09 38.2 0.1 0.0011 19.3 0.1 2.4 2 1 0 2 2 2 2 AAA ATPase domain AAA_25 PF13481.6 gi|21228098|ref|NP_634020.1| - 1.2e-08 34.7 0.6 0.017 14.7 0.0 3.2 3 0 0 3 3 3 2 AAA domain T2SSE PF00437.20 gi|21228098|ref|NP_634020.1| - 2e-07 30.3 0.1 0.00066 18.8 0.1 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_22 PF13401.6 gi|21228098|ref|NP_634020.1| - 3.1e-07 30.7 2.1 0.0033 17.7 0.7 3.1 2 2 0 2 2 2 2 AAA domain AAA_23 PF13476.6 gi|21228098|ref|NP_634020.1| - 8.4e-07 29.7 0.0 0.0016 19.0 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|21228098|ref|NP_634020.1| - 1.3e-06 29.0 0.6 0.095 13.3 0.0 2.8 3 0 0 3 3 2 2 AAA domain RsgA_GTPase PF03193.16 gi|21228098|ref|NP_634020.1| - 4.3e-06 26.7 0.5 0.0091 15.9 0.1 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_28 PF13521.6 gi|21228098|ref|NP_634020.1| - 5.2e-06 26.8 0.6 0.089 13.0 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 gi|21228098|ref|NP_634020.1| - 2.2e-05 24.1 0.3 0.0085 15.6 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region Mg_chelatase PF01078.21 gi|21228098|ref|NP_634020.1| - 3.2e-05 23.4 0.2 0.003 17.0 0.0 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 gi|21228098|ref|NP_634020.1| - 3.8e-05 23.7 0.2 0.33 10.9 0.0 2.5 2 0 0 2 2 2 2 NACHT domain SbcCD_C PF13558.6 gi|21228098|ref|NP_634020.1| - 6.2e-05 23.2 0.1 1.2 9.4 0.1 3.1 2 1 0 2 2 2 2 Putative exonuclease SbcCD, C subunit NTPase_1 PF03266.15 gi|21228098|ref|NP_634020.1| - 7.1e-05 22.8 0.2 0.47 10.3 0.0 2.6 2 0 0 2 2 2 2 NTPase AAA_5 PF07728.14 gi|21228098|ref|NP_634020.1| - 0.00011 22.2 0.5 0.14 12.1 0.1 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 gi|21228098|ref|NP_634020.1| - 0.00014 21.8 0.0 0.089 12.7 0.0 2.3 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_30 PF13604.6 gi|21228098|ref|NP_634020.1| - 0.00015 21.6 0.1 0.17 11.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|21228098|ref|NP_634020.1| - 0.00018 21.5 0.2 0.0013 18.7 0.1 2.1 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_15 PF13175.6 gi|21228098|ref|NP_634020.1| - 0.00021 21.1 0.5 0.22 11.2 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain RNA_helicase PF00910.22 gi|21228098|ref|NP_634020.1| - 0.00021 21.6 0.2 0.22 11.9 0.0 2.8 3 0 0 3 3 2 1 RNA helicase MeaB PF03308.16 gi|21228098|ref|NP_634020.1| - 0.00024 20.2 0.1 0.034 13.1 0.0 2.4 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 gi|21228098|ref|NP_634020.1| - 0.00037 20.5 0.1 0.36 10.9 0.0 2.6 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|21228098|ref|NP_634020.1| - 0.0009 18.6 0.0 0.44 9.8 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin MMR_HSR1 PF01926.23 gi|21228098|ref|NP_634020.1| - 0.00092 19.3 1.9 1.4 9.0 0.2 3.1 2 1 0 2 2 2 2 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|21228098|ref|NP_634020.1| - 0.0014 18.8 0.8 2.3 8.4 0.1 2.7 2 1 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|21228098|ref|NP_634020.1| - 0.0015 18.3 0.7 1.3 8.7 0.1 2.5 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 gi|21228098|ref|NP_634020.1| - 0.0016 17.9 0.5 0.34 10.2 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA PF00004.29 gi|21228098|ref|NP_634020.1| - 0.0025 18.3 2.0 0.12 12.8 0.0 3.0 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 gi|21228098|ref|NP_634020.1| - 0.0029 17.0 5.0 1.5 8.1 0.2 3.7 4 0 0 4 4 3 1 KaiC DAP3 PF10236.9 gi|21228098|ref|NP_634020.1| - 0.0042 16.3 1.4 1.1 8.3 0.1 2.3 2 0 0 2 2 2 1 Mitochondrial ribosomal death-associated protein 3 Viral_helicase1 PF01443.18 gi|21228098|ref|NP_634020.1| - 0.0057 16.4 0.4 3.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase SRP54 PF00448.22 gi|21228098|ref|NP_634020.1| - 0.0062 16.2 0.5 0.28 10.8 0.1 2.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain PduV-EutP PF10662.9 gi|21228098|ref|NP_634020.1| - 0.0093 15.7 0.2 1.3 8.8 0.0 2.6 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation ATP_bind_1 PF03029.17 gi|21228098|ref|NP_634020.1| - 0.01 15.6 0.3 2.2 8.0 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein PIF1 PF05970.14 gi|21228098|ref|NP_634020.1| - 0.012 14.8 0.2 0.86 8.7 0.1 2.2 2 0 0 2 2 2 0 PIF1-like helicase NB-ARC PF00931.22 gi|21228098|ref|NP_634020.1| - 0.016 14.4 1.4 0.97 8.6 0.1 2.5 3 0 0 3 3 3 0 NB-ARC domain G-alpha PF00503.20 gi|21228098|ref|NP_634020.1| - 0.017 14.3 0.4 3.7 6.6 0.1 2.3 2 0 0 2 2 2 0 G-protein alpha subunit IstB_IS21 PF01695.17 gi|21228098|ref|NP_634020.1| - 0.018 14.8 0.2 2.4 7.9 0.1 2.5 2 0 0 2 2 2 0 IstB-like ATP binding protein ABC_ATPase PF09818.9 gi|21228098|ref|NP_634020.1| - 0.021 13.6 3.3 3.7 6.3 0.2 3.0 3 0 0 3 3 3 0 Predicted ATPase of the ABC class DUF815 PF05673.13 gi|21228098|ref|NP_634020.1| - 0.027 13.6 0.2 0.63 9.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) PC4 PF02229.16 gi|21228098|ref|NP_634020.1| - 0.038 13.6 0.2 2.8 7.7 0.2 2.5 2 0 0 2 2 2 0 Transcriptional Coactivator p15 (PC4) TsaE PF02367.17 gi|21228098|ref|NP_634020.1| - 0.04 13.9 0.7 0.95 9.5 0.1 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TniB PF05621.11 gi|21228098|ref|NP_634020.1| - 0.042 13.2 2.8 2.8 7.3 0.1 3.4 4 0 0 4 4 4 0 Bacterial TniB protein cobW PF02492.19 gi|21228098|ref|NP_634020.1| - 0.064 12.8 4.9 1.9 8.1 0.1 2.7 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain TrwB_AAD_bind PF10412.9 gi|21228098|ref|NP_634020.1| - 0.068 12.1 0.8 2 7.2 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_19 PF13245.6 gi|21228098|ref|NP_634020.1| - 0.069 13.5 0.4 11 6.3 0.1 2.5 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|21228098|ref|NP_634020.1| - 0.081 12.5 0.1 8.6 5.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|21228098|ref|NP_634020.1| - 0.086 12.6 0.2 4.4 7.0 0.1 2.5 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Fer4_NifH PF00142.18 gi|21228098|ref|NP_634020.1| - 0.09 12.2 0.0 0.18 11.2 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Adeno_IVa2 PF02456.15 gi|21228098|ref|NP_634020.1| - 0.099 11.4 0.2 0.99 8.1 0.0 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein CbiA PF01656.23 gi|21228098|ref|NP_634020.1| - 0.12 12.5 2.0 0.35 10.9 0.1 2.4 3 1 0 3 3 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain dNK PF01712.19 gi|21228098|ref|NP_634020.1| - 0.14 12.0 0.1 7.2 6.4 0.1 2.2 2 0 0 2 2 2 0 Deoxynucleoside kinase DUF87 PF01935.17 gi|21228098|ref|NP_634020.1| - 0.15 12.2 0.7 5.1 7.1 0.0 2.5 2 0 0 2 2 2 0 Helicase HerA, central domain DUF1509 PF07420.11 gi|21228098|ref|NP_634020.1| - 0.18 10.8 0.0 4.6 6.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1509) DLIC PF05783.11 gi|21228098|ref|NP_634020.1| - 0.2 10.4 0.1 6.8 5.4 0.0 2.1 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) DUF3584 PF12128.8 gi|21228098|ref|NP_634020.1| - 0.3 8.5 0.2 0.44 8.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Dynamin_N PF00350.23 gi|21228098|ref|NP_634020.1| - 0.47 10.5 1.7 17 5.4 0.1 2.5 2 0 0 2 2 2 0 Dynamin family DUF4625 PF15418.6 gi|21228099|ref|NP_634021.1| - 0.026 14.7 0.0 0.053 13.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4625) NPCBM_assoc PF10633.9 gi|21228099|ref|NP_634021.1| - 0.039 14.2 0.0 8.1 6.8 0.0 2.6 2 1 0 2 2 2 0 NPCBM-associated, NEW3 domain of alpha-galactosidase OppC_N PF12911.7 gi|21228099|ref|NP_634021.1| - 6.6 6.8 9.7 0.61 10.1 0.3 3.3 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C CobN-Mg_chel PF02514.16 gi|21228100|ref|NP_634022.1| - 0 1241.8 0.0 0 1241.6 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase PQQ PF01011.21 gi|21228101|ref|NP_634023.1| - 9.3e-14 50.6 2.0 0.03 14.2 0.0 5.9 5 0 0 5 5 5 4 PQQ enzyme repeat PQQ_2 PF13360.6 gi|21228101|ref|NP_634023.1| - 4.2e-13 49.4 0.1 1.4e-07 31.4 0.0 3.4 1 1 2 3 3 3 3 PQQ-like domain PQQ_3 PF13570.6 gi|21228101|ref|NP_634023.1| - 3.9e-10 39.9 1.9 2.9 8.5 0.2 6.8 6 0 0 6 6 6 4 PQQ-like domain ANAPC4_WD40 PF12894.7 gi|21228101|ref|NP_634023.1| - 0.00028 21.1 0.0 0.015 15.6 0.0 3.3 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 gi|21228101|ref|NP_634023.1| - 0.0052 17.6 0.0 11 7.1 0.0 4.5 5 0 0 5 5 5 1 WD domain, G-beta repeat PD40 PF07676.12 gi|21228101|ref|NP_634023.1| - 0.014 15.3 2.9 14 5.8 0.0 5.2 5 1 0 5 5 5 0 WD40-like Beta Propeller Repeat TolB_like PF15869.5 gi|21228101|ref|NP_634023.1| - 0.033 13.4 0.1 2.4 7.3 0.0 3.0 2 1 0 3 3 3 0 TolB-like 6-blade propeller-like Arylsulfotrans PF05935.11 gi|21228101|ref|NP_634023.1| - 0.05 12.5 0.1 0.89 8.4 0.0 2.7 2 1 0 2 2 2 0 Arylsulfotransferase (ASST) PQQ_2 PF13360.6 gi|21228102|ref|NP_634024.1| - 2.3e-10 40.5 0.0 0.0031 17.1 0.0 3.3 2 1 1 3 3 3 3 PQQ-like domain PQQ PF01011.21 gi|21228102|ref|NP_634024.1| - 4.2e-10 39.1 0.2 0.0025 17.6 0.0 6.0 5 0 0 5 5 5 2 PQQ enzyme repeat PQQ_3 PF13570.6 gi|21228102|ref|NP_634024.1| - 3.9e-07 30.3 7.7 0.14 12.7 0.0 7.0 6 1 1 7 7 7 2 PQQ-like domain WD40 PF00400.32 gi|21228102|ref|NP_634024.1| - 7.2e-06 26.6 0.8 0.11 13.4 0.0 4.9 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 gi|21228102|ref|NP_634024.1| - 0.0036 17.6 0.0 0.067 13.5 0.0 2.8 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain DUF5122 PF17164.4 gi|21228102|ref|NP_634024.1| - 0.0067 16.7 2.5 2.7 8.4 0.1 3.8 3 0 0 3 3 3 1 Domain of unknown function (DUF5122) beta-propeller LPAM_1 PF08139.12 gi|21228102|ref|NP_634024.1| - 0.028 14.9 2.7 0.1 13.1 2.7 2.1 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site S-layer PF07752.11 gi|21228104|ref|NP_634026.1| - 1.5e-71 240.4 5.8 3.9e-47 160.5 0.1 3.1 2 1 1 3 3 3 3 S-layer protein AAA_lid_2 PF17863.1 gi|21228105|ref|NP_634027.1| - 1e-22 79.7 0.0 2.6e-22 78.4 0.0 1.7 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 gi|21228105|ref|NP_634027.1| - 4.8e-13 49.0 0.1 4.3e-09 36.1 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI VWA_2 PF13519.6 gi|21228105|ref|NP_634027.1| - 1.7e-12 47.9 0.0 4.4e-12 46.6 0.0 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|21228105|ref|NP_634027.1| - 5.6e-10 39.7 0.0 1.2e-09 38.7 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_5 PF07728.14 gi|21228105|ref|NP_634027.1| - 1.5e-09 38.0 0.2 7.5e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|21228105|ref|NP_634027.1| - 8.9e-07 28.2 0.1 0.00034 19.8 0.0 2.9 2 1 0 2 2 2 2 MCM P-loop domain Sigma54_activat PF00158.26 gi|21228105|ref|NP_634027.1| - 0.0018 18.0 0.1 0.22 11.2 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_3 PF07726.11 gi|21228105|ref|NP_634027.1| - 0.0071 16.2 0.0 0.27 11.1 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RR_TM4-6 PF06459.12 gi|21228105|ref|NP_634027.1| - 0.0072 16.2 11.6 0.011 15.5 11.6 1.2 1 0 0 1 1 1 1 Ryanodine Receptor TM 4-6 AAA_22 PF13401.6 gi|21228105|ref|NP_634027.1| - 0.011 16.0 0.0 0.034 14.4 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|21228105|ref|NP_634027.1| - 0.012 16.0 0.3 0.058 13.8 0.0 2.3 2 1 0 2 2 2 0 AAA ATPase domain AAA PF00004.29 gi|21228105|ref|NP_634027.1| - 0.033 14.6 0.0 0.16 12.4 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Gp_dh_C PF02800.20 gi|21228105|ref|NP_634027.1| - 0.068 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tim54 PF11711.8 gi|21228105|ref|NP_634027.1| - 0.47 9.2 9.1 0.73 8.5 9.1 1.3 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Hid1 PF12722.7 gi|21228105|ref|NP_634027.1| - 3.6 5.6 13.2 5.1 5.1 13.2 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein ALMT PF11744.8 gi|21228105|ref|NP_634027.1| - 8.4 5.1 8.8 12 4.6 8.8 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter DNA_pol_B PF00136.21 gi|21228106|ref|NP_634028.1| - 5.5e-106 355.0 0.0 7.9e-106 354.5 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|21228106|ref|NP_634028.1| - 2.3e-51 175.0 0.0 4e-51 174.1 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.9 gi|21228106|ref|NP_634028.1| - 0.0032 17.2 0.0 0.0064 16.2 0.0 1.4 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_B_2 PF03175.13 gi|21228106|ref|NP_634028.1| - 0.1 11.4 0.1 0.52 9.1 0.0 1.9 2 0 0 2 2 2 0 DNA polymerase type B, organellar and viral PBP_like_2 PF12849.7 gi|21228107|ref|NP_634029.1| - 8e-47 160.2 0.7 1.5e-46 159.3 0.7 1.4 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|21228107|ref|NP_634029.1| - 2.1e-23 82.5 0.1 2.9e-23 82.0 0.1 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|21228107|ref|NP_634029.1| - 2.8e-07 30.5 0.0 1.5e-06 28.1 0.0 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|21228107|ref|NP_634029.1| - 0.081 12.9 0.3 0.26 11.2 0.3 1.9 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|21228108|ref|NP_634030.1| - 8.4e-22 77.8 20.1 8.4e-22 77.8 20.1 2.2 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component SHR3_chaperone PF08229.11 gi|21228108|ref|NP_634030.1| - 0.22 10.5 2.0 0.47 9.4 0.2 2.2 2 0 0 2 2 2 0 ER membrane protein SH3 DUF3333 PF11812.8 gi|21228109|ref|NP_634031.1| - 0.033 14.4 0.5 0.057 13.6 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) DUF2780 PF11075.8 gi|21228109|ref|NP_634031.1| - 0.038 14.1 0.0 0.055 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function VcgC/VcgE (DUF2780) FeoB_C PF07664.12 gi|21228109|ref|NP_634031.1| - 0.12 12.0 3.4 0.32 10.7 0.4 2.3 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus COX4 PF02936.14 gi|21228109|ref|NP_634031.1| - 0.19 11.7 0.3 0.85 9.6 0.0 1.9 1 1 1 2 2 2 0 Cytochrome c oxidase subunit IV BPD_transp_1 PF00528.22 gi|21228110|ref|NP_634032.1| - 1.7e-05 24.7 5.3 3.1e-05 23.8 5.3 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|21228111|ref|NP_634033.1| - 3.7e-32 111.7 0.0 5.3e-32 111.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21228111|ref|NP_634033.1| - 2e-12 47.6 0.0 6.1e-06 26.3 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21228111|ref|NP_634033.1| - 1.5e-08 34.4 0.0 5e-07 29.4 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|21228111|ref|NP_634033.1| - 3e-05 23.9 0.0 0.00017 21.4 0.0 1.8 1 1 1 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|21228111|ref|NP_634033.1| - 0.00022 21.2 0.0 0.00042 20.3 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 gi|21228111|ref|NP_634033.1| - 0.00052 19.7 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 gi|21228111|ref|NP_634033.1| - 0.00057 19.9 0.0 0.0011 18.9 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 gi|21228111|ref|NP_634033.1| - 0.0014 19.0 0.0 0.0023 18.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|21228111|ref|NP_634033.1| - 0.0021 18.5 0.0 0.0047 17.3 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|21228111|ref|NP_634033.1| - 0.0021 18.6 0.0 0.0036 17.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|21228111|ref|NP_634033.1| - 0.0061 16.2 0.0 0.015 14.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|21228111|ref|NP_634033.1| - 0.013 15.9 0.0 0.14 12.5 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|21228111|ref|NP_634033.1| - 0.018 15.2 0.0 0.035 14.3 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|21228111|ref|NP_634033.1| - 0.027 15.0 0.0 0.053 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|21228111|ref|NP_634033.1| - 0.07 12.9 0.0 0.28 10.9 0.0 1.9 2 1 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 gi|21228111|ref|NP_634033.1| - 0.089 12.5 0.0 0.29 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|21228111|ref|NP_634033.1| - 0.13 12.0 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family SbcCD_C PF13558.6 gi|21228111|ref|NP_634033.1| - 0.14 12.4 0.1 3.1 8.1 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit G-alpha PF00503.20 gi|21228111|ref|NP_634033.1| - 0.15 11.2 0.0 2.3 7.3 0.0 2.0 2 0 0 2 2 2 0 G-protein alpha subunit AAA_13 PF13166.6 gi|21228111|ref|NP_634033.1| - 0.2 10.3 0.0 0.54 8.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain PhoU PF01895.19 gi|21228112|ref|NP_634034.1| - 3.6e-35 120.3 8.2 9e-20 70.9 1.8 2.1 2 0 0 2 2 2 2 PhoU domain Amidohydro_1 PF01979.20 gi|21228113|ref|NP_634035.1| - 1.6e-21 77.1 0.0 2.1e-21 76.6 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|21228113|ref|NP_634035.1| - 1.4e-12 47.9 0.0 2.5e-05 24.0 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family KH_1 PF00013.29 gi|21228114|ref|NP_634036.1| - 1.7e-10 40.5 4.9 4.9e-07 29.5 0.6 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 gi|21228114|ref|NP_634036.1| - 0.0032 17.2 2.9 1.1 9.1 0.2 2.5 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 gi|21228114|ref|NP_634036.1| - 0.068 13.0 5.6 2 8.3 0.2 3.4 2 1 1 3 3 3 0 KH domain Ribosomal_L6 PF00347.23 gi|21228114|ref|NP_634036.1| - 0.093 13.4 1.0 3.7 8.3 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein L6 RIO1 PF01163.22 gi|21228115|ref|NP_634037.1| - 2.6e-62 209.8 0.2 3.4e-62 209.4 0.2 1.1 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|21228115|ref|NP_634037.1| - 4.6e-07 29.5 0.1 7.8e-07 28.7 0.1 1.5 1 1 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 gi|21228115|ref|NP_634037.1| - 0.002 17.5 0.0 0.68 9.2 0.0 2.3 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 gi|21228115|ref|NP_634037.1| - 0.0023 17.9 0.1 0.038 13.9 0.0 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 gi|21228115|ref|NP_634037.1| - 0.0037 16.1 0.0 0.0068 15.2 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase Lectin_like PF18560.1 gi|21228115|ref|NP_634037.1| - 0.067 13.4 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Lectin like domain Choline_kinase PF01633.20 gi|21228115|ref|NP_634037.1| - 0.12 11.9 0.2 0.32 10.6 0.1 1.7 2 0 0 2 2 2 0 Choline/ethanolamine kinase eIF-1a PF01176.19 gi|21228116|ref|NP_634038.1| - 1.7e-18 66.2 0.2 2.2e-18 65.8 0.2 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Med14 PF08638.11 gi|21228116|ref|NP_634038.1| - 0.0041 16.6 0.0 0.0047 16.4 0.0 1.1 1 0 0 1 1 1 1 Mediator complex subunit MED14 NAC PF01849.18 gi|21228117|ref|NP_634039.1| - 6.1e-18 64.5 5.1 1e-17 63.8 5.1 1.4 1 0 0 1 1 1 1 NAC domain UBA_4 PF14555.6 gi|21228117|ref|NP_634039.1| - 0.00019 21.2 0.1 0.00027 20.7 0.1 1.2 1 0 0 1 1 1 1 UBA-like domain TIP49 PF06068.13 gi|21228117|ref|NP_634039.1| - 0.025 13.8 2.6 0.03 13.5 2.6 1.0 1 0 0 1 1 1 0 TIP49 P-loop domain HOIP-UBA PF16678.5 gi|21228117|ref|NP_634039.1| - 0.033 14.2 0.6 0.045 13.8 0.6 1.5 1 1 0 1 1 1 0 HOIP UBA domain pair DUF1257 PF06868.11 gi|21228117|ref|NP_634039.1| - 0.052 13.8 0.2 0.087 13.1 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1257) DP-EP PF08985.11 gi|21228117|ref|NP_634039.1| - 0.054 13.7 0.7 0.066 13.4 0.7 1.1 1 0 0 1 1 1 0 DP-EP family IL2 PF00715.17 gi|21228117|ref|NP_634039.1| - 0.094 12.7 0.6 0.18 11.7 0.3 1.6 1 1 0 1 1 1 0 Interleukin 2 DUF3867 PF12983.7 gi|21228117|ref|NP_634039.1| - 0.14 12.2 3.3 0.54 10.3 2.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3867) Fe-S_biosyn PF01521.20 gi|21228118|ref|NP_634040.1| - 1.9e-13 50.5 0.0 2.3e-13 50.3 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis DUF2652 PF10851.8 gi|21228119|ref|NP_634041.1| - 0.032 14.3 0.0 0.064 13.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2652) GDE_C PF06202.14 gi|21228120|ref|NP_634042.1| - 2.6e-138 461.1 0.0 4.8e-138 460.3 0.0 1.4 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|21228120|ref|NP_634042.1| - 4.3e-69 232.3 0.0 5.7e-69 231.9 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.13 gi|21228120|ref|NP_634042.1| - 0.0016 17.7 0.0 0.0031 16.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Glyco_hydro_100 PF12899.7 gi|21228120|ref|NP_634042.1| - 0.014 14.1 0.3 2.2 6.8 0.0 2.8 2 1 0 2 2 2 0 Alkaline and neutral invertase Plasmo_rep PF12135.8 gi|21228120|ref|NP_634042.1| - 0.037 13.6 3.8 0.042 13.4 0.4 2.4 2 0 0 2 2 2 0 Plasmodium repeat family PRA-CH PF01502.18 gi|21228121|ref|NP_634043.1| - 3.7e-37 126.0 0.7 4.6e-37 125.7 0.7 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase T2SSE PF00437.20 gi|21228122|ref|NP_634044.1| - 1.2e-11 44.2 0.2 2.2e-11 43.4 0.2 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.29 gi|21228122|ref|NP_634044.1| - 0.00014 21.6 0.7 0.00043 20.1 0.7 1.9 1 0 0 1 1 1 1 KH domain PIN_4 PF13638.6 gi|21228122|ref|NP_634044.1| - 0.00026 21.3 0.0 0.00063 20.0 0.0 1.7 1 0 0 1 1 1 1 PIN domain KH_2 PF07650.17 gi|21228122|ref|NP_634044.1| - 0.0005 19.8 1.1 0.0018 18.0 1.1 2.0 1 0 0 1 1 1 1 KH domain PIN PF01850.21 gi|21228122|ref|NP_634044.1| - 0.00066 20.2 0.1 0.0022 18.5 0.0 1.9 2 0 0 2 2 1 1 PIN domain TIP49 PF06068.13 gi|21228122|ref|NP_634044.1| - 0.0009 18.5 1.2 0.0021 17.4 0.0 2.0 2 1 1 3 3 3 1 TIP49 P-loop domain AAA_22 PF13401.6 gi|21228122|ref|NP_634044.1| - 0.00096 19.4 0.0 0.59 10.4 0.0 2.7 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.6 gi|21228122|ref|NP_634044.1| - 0.0013 19.1 0.0 0.003 18.0 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|21228122|ref|NP_634044.1| - 0.0041 16.4 0.0 0.0087 15.4 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin KH_4 PF13083.6 gi|21228122|ref|NP_634044.1| - 0.0059 16.5 0.3 0.023 14.6 0.3 2.0 1 0 0 1 1 1 1 KH domain AAA_33 PF13671.6 gi|21228122|ref|NP_634044.1| - 0.0095 16.1 0.0 0.023 14.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|21228122|ref|NP_634044.1| - 0.012 14.9 0.0 0.069 12.5 0.0 2.2 2 1 1 3 3 3 0 KaiC AAA_18 PF13238.6 gi|21228122|ref|NP_634044.1| - 0.014 16.0 0.0 0.03 14.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|21228122|ref|NP_634044.1| - 0.016 15.6 0.0 0.042 14.3 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|21228122|ref|NP_634044.1| - 0.017 14.9 0.1 0.044 13.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|21228122|ref|NP_634044.1| - 0.017 15.0 0.0 0.048 13.6 0.0 1.7 1 0 0 1 1 1 0 NTPase APS_kinase PF01583.20 gi|21228122|ref|NP_634044.1| - 0.018 14.9 0.0 0.29 11.0 0.0 2.4 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_29 PF13555.6 gi|21228122|ref|NP_634044.1| - 0.034 13.9 0.0 0.084 12.6 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 gi|21228122|ref|NP_634044.1| - 0.039 13.9 0.0 0.11 12.4 0.0 1.8 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 gi|21228122|ref|NP_634044.1| - 0.046 13.4 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|21228122|ref|NP_634044.1| - 0.061 13.3 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 gi|21228122|ref|NP_634044.1| - 0.064 12.8 0.1 0.12 11.9 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|21228122|ref|NP_634044.1| - 0.078 12.7 0.0 0.26 11.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain RuvB_N PF05496.12 gi|21228122|ref|NP_634044.1| - 0.086 12.6 0.1 0.31 10.8 0.0 1.9 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 gi|21228122|ref|NP_634044.1| - 0.096 13.0 0.0 3.7 7.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|21228122|ref|NP_634044.1| - 0.11 12.2 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein RNA_helicase PF00910.22 gi|21228122|ref|NP_634044.1| - 0.12 12.8 0.0 0.23 11.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase ATP_bind_1 PF03029.17 gi|21228122|ref|NP_634044.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Thymidylate_kin PF02223.17 gi|21228122|ref|NP_634044.1| - 0.15 11.7 0.0 0.35 10.5 0.0 1.6 1 1 0 1 1 1 0 Thymidylate kinase PPV_E1_C PF00519.17 gi|21228122|ref|NP_634044.1| - 0.29 9.9 0.0 0.43 9.3 0.0 1.1 1 0 0 1 1 1 0 Papillomavirus helicase FlaC_arch PF05377.11 gi|21228123|ref|NP_634045.1| - 0.021 15.2 3.0 0.5 10.8 0.0 3.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF1664 PF07889.12 gi|21228123|ref|NP_634045.1| - 0.022 14.8 1.0 0.45 10.6 0.1 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Prefoldin_2 PF01920.20 gi|21228123|ref|NP_634045.1| - 0.025 14.5 3.9 2.1 8.4 0.1 2.7 2 1 1 3 3 3 0 Prefoldin subunit APG17 PF04108.12 gi|21228123|ref|NP_634045.1| - 0.038 13.1 1.3 5.4 6.0 0.3 2.1 2 0 0 2 2 2 0 Autophagy protein Apg17 Prefoldin_3 PF13758.6 gi|21228123|ref|NP_634045.1| - 0.052 13.6 1.4 0.82 9.8 0.1 2.6 2 1 1 3 3 3 0 Prefoldin subunit Baculo_PEP_C PF04513.12 gi|21228123|ref|NP_634045.1| - 0.064 13.3 0.1 0.26 11.3 0.0 1.8 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus TRAF_BIRC3_bd PF16673.5 gi|21228123|ref|NP_634045.1| - 0.11 12.4 3.7 0.4 10.5 1.1 2.3 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain Helo_like_N PF17111.5 gi|21228123|ref|NP_634045.1| - 0.13 11.6 0.6 0.43 9.9 0.3 1.8 2 0 0 2 2 2 0 Fungal N-terminal domain of STAND proteins CLZ PF16526.5 gi|21228123|ref|NP_634045.1| - 0.13 12.6 3.0 2.9 8.3 0.4 3.2 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4164 PF13747.6 gi|21228123|ref|NP_634045.1| - 0.23 11.8 1.5 0.9 9.9 0.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) CCDC-167 PF15188.6 gi|21228123|ref|NP_634045.1| - 0.27 11.6 1.8 0.74 10.2 0.0 2.4 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 Lebercilin PF15619.6 gi|21228123|ref|NP_634045.1| - 0.44 10.2 2.7 11 5.6 0.3 2.2 2 0 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF5082 PF16888.5 gi|21228123|ref|NP_634045.1| - 0.59 10.4 2.4 4.4 7.6 0.3 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) MetOD2 PF18548.1 gi|21228123|ref|NP_634045.1| - 1.5 9.0 4.2 2.7 8.1 0.2 2.5 2 1 0 2 2 2 0 Metanogen output domain 2 DUF241 PF03087.14 gi|21228123|ref|NP_634045.1| - 3.9 7.2 6.6 18 5.1 0.1 2.5 2 1 0 2 2 2 0 Arabidopsis protein of unknown function TolA_bind_tri PF16331.5 gi|21228123|ref|NP_634045.1| - 6 7.0 5.8 19 5.4 0.6 3.0 2 1 0 2 2 2 0 TolA binding protein trimerisation LysE PF01810.18 gi|21228124|ref|NP_634046.1| - 3.6e-22 78.8 16.2 1.3e-20 73.7 16.2 2.0 1 1 0 1 1 1 1 LysE type translocator Phtf-FEM1B_bdg PF12129.8 gi|21228124|ref|NP_634046.1| - 0.16 11.8 1.0 0.25 11.1 0.3 1.7 1 1 1 2 2 2 0 Male germ-cell putative homeodomain transcription factor Big_1 PF02369.16 gi|21228125|ref|NP_634047.1| - 0.00071 19.5 0.4 0.0013 18.7 0.4 1.4 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 1) CarboxypepD_reg PF13620.6 gi|21228125|ref|NP_634047.1| - 0.04 14.2 0.0 0.1 12.9 0.0 1.8 1 1 1 2 2 2 0 Carboxypeptidase regulatory-like domain DsbG_N PF18257.1 gi|21228125|ref|NP_634047.1| - 0.079 13.1 0.0 0.21 11.8 0.0 1.6 1 1 1 2 2 2 0 Disulfide isomerase DsbG N-terminal CarboxypepD_reg PF13620.6 gi|21228126|ref|NP_634048.1| - 1.4e-05 25.3 0.6 8.1e-05 22.8 0.6 2.2 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain Big_1 PF02369.16 gi|21228126|ref|NP_634048.1| - 0.00025 21.0 2.9 0.00025 21.0 2.9 1.7 1 1 0 1 1 1 1 Bacterial Ig-like domain (group 1) MG4 PF17789.1 gi|21228126|ref|NP_634048.1| - 0.0078 16.3 0.1 0.013 15.6 0.1 1.5 1 0 0 1 1 1 1 Macroglobulin domain MG4 CarbopepD_reg_2 PF13715.6 gi|21228126|ref|NP_634048.1| - 0.052 13.5 0.2 0.14 12.2 0.2 1.7 1 0 0 1 1 1 0 CarboxypepD_reg-like domain Alpha_adaptin_C PF02296.16 gi|21228126|ref|NP_634048.1| - 0.063 13.5 0.0 0.097 12.9 0.0 1.3 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain Glyco_hydro2_C5 PF18565.1 gi|21228126|ref|NP_634048.1| - 0.088 12.7 0.1 0.81 9.6 0.1 2.2 1 1 0 1 1 1 0 Glycoside hydrolase family 2 C-terminal domain 5 HEAT_2 PF13646.6 gi|21228130|ref|NP_634052.1| - 6.9e-47 157.8 3.9 1.7e-11 44.3 0.0 5.9 3 1 2 6 6 6 5 HEAT repeats HEAT PF02985.22 gi|21228130|ref|NP_634052.1| - 2.1e-35 117.7 5.0 0.032 14.5 0.0 13.5 13 0 0 13 13 13 7 HEAT repeat Adaptin_N PF01602.20 gi|21228130|ref|NP_634052.1| - 7.5e-21 74.3 1.9 3.7e-05 22.5 0.1 6.0 1 1 2 4 4 4 4 Adaptin N terminal region CLASP_N PF12348.8 gi|21228130|ref|NP_634052.1| - 5.8e-13 48.9 1.9 0.022 14.3 0.0 6.2 3 2 4 7 7 7 5 CLASP N terminal Cnd1 PF12717.7 gi|21228130|ref|NP_634052.1| - 2.2e-12 47.3 13.4 0.076 13.1 0.1 7.9 2 2 6 9 9 9 6 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 gi|21228130|ref|NP_634052.1| - 1.4e-07 31.9 10.9 12 6.5 0.0 9.1 9 3 2 11 11 9 1 HEAT-like repeat bMG1 PF17970.1 gi|21228130|ref|NP_634052.1| - 2.8e-06 27.4 5.3 23 5.1 0.0 7.8 2 2 7 10 10 10 0 Bacterial Alpha-2-macroglobulin MG1 domain CN_hydrolase PF00795.22 gi|21228130|ref|NP_634052.1| - 0.0085 15.5 0.0 0.4 10.0 0.0 2.3 2 0 0 2 2 2 1 Carbon-nitrogen hydrolase TetR_C_30 PF17939.1 gi|21228130|ref|NP_634052.1| - 0.016 15.4 0.1 3.5 7.9 0.0 4.0 3 1 1 4 4 4 0 Tetracyclin repressor-like, C-terminal domain Arm PF00514.23 gi|21228130|ref|NP_634052.1| - 0.021 14.9 0.8 1.1e+02 3.1 0.0 5.8 7 0 0 7 7 7 0 Armadillo/beta-catenin-like repeat ATP13 PF12921.7 gi|21228130|ref|NP_634052.1| - 0.047 13.5 3.9 55 3.7 0.0 5.4 4 2 2 6 6 6 0 Mitochondrial ATPase expression DUF2536 PF10750.9 gi|21228130|ref|NP_634052.1| - 0.093 12.6 0.7 0.37 10.7 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2536) Tn7_TnsC_Int PF11426.8 gi|21228130|ref|NP_634052.1| - 0.14 12.3 1.1 3 8.1 0.0 3.7 5 0 0 5 5 5 0 Tn7 transposition regulator TnsC HEAT_PBS PF03130.16 gi|21228130|ref|NP_634052.1| - 0.15 12.8 14.7 90 4.2 0.0 7.2 6 0 0 6 6 6 0 PBS lyase HEAT-like repeat GATase PF00117.28 gi|21228132|ref|NP_634054.1| - 1.1e-21 77.5 0.0 1.4e-21 77.2 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|21228132|ref|NP_634054.1| - 1.1e-07 31.9 0.0 1.6e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase C26 SNO PF01174.19 gi|21228132|ref|NP_634054.1| - 2.6e-07 30.7 0.0 1.2e-06 28.6 0.0 1.8 1 1 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|21228132|ref|NP_634054.1| - 2.2e-06 27.4 0.5 1.4e-05 24.7 0.1 1.9 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|21228132|ref|NP_634054.1| - 0.0026 17.6 0.0 0.0041 17.0 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_5 PF13507.6 gi|21228132|ref|NP_634054.1| - 0.029 13.5 0.0 0.46 9.5 0.0 2.1 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain AIRS_C PF02769.22 gi|21228133|ref|NP_634055.1| - 4e-17 62.8 1.6 7.5e-17 61.9 1.6 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|21228133|ref|NP_634055.1| - 1.6e-08 35.1 0.4 6e-08 33.2 0.4 2.0 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain NfeD PF01957.18 gi|21228134|ref|NP_634056.1| - 6.7e-11 42.4 4.2 9.5e-11 41.9 2.3 2.3 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding CLP_protease PF00574.23 gi|21228134|ref|NP_634056.1| - 4.1e-06 26.8 0.2 7.2e-06 26.0 0.2 1.3 1 0 0 1 1 1 1 Clp protease SDH_sah PF01972.16 gi|21228134|ref|NP_634056.1| - 0.035 13.1 0.4 0.061 12.3 0.4 1.4 1 0 0 1 1 1 0 Serine dehydrogenase proteinase FMN_dh PF01070.18 gi|21228134|ref|NP_634056.1| - 0.13 11.3 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase COX14 PF14880.6 gi|21228134|ref|NP_634056.1| - 0.54 10.1 0.0 0.54 10.1 0.0 1.9 2 0 0 2 2 2 0 Cytochrome oxidase c assembly Band_7 PF01145.25 gi|21228135|ref|NP_634057.1| - 9.6e-39 133.2 2.8 1.3e-38 132.8 2.8 1.1 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|21228135|ref|NP_634057.1| - 5.4e-05 23.0 0.1 9.4e-05 22.2 0.1 1.5 1 0 0 1 1 1 1 SPFH domain-Band 7 family Ground-like PF04155.18 gi|21228135|ref|NP_634057.1| - 0.084 13.6 0.6 0.2 12.3 0.1 2.0 2 1 0 2 2 2 0 Ground-like domain DnaJ_CXXCXGXG PF00684.19 gi|21228136|ref|NP_634058.1| - 3.7e-09 36.8 6.8 3.7e-09 36.8 6.8 2.6 1 1 1 2 2 2 2 DnaJ central domain tRNA_anti-codon PF01336.25 gi|21228136|ref|NP_634058.1| - 4.1e-09 36.3 0.0 9.9e-09 35.1 0.0 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DHH PF01368.20 gi|21228136|ref|NP_634058.1| - 2.9e-06 27.5 0.2 8.7e-06 25.9 0.2 1.8 1 0 0 1 1 1 1 DHH family tRNA_anti_2 PF13742.6 gi|21228136|ref|NP_634058.1| - 6e-05 23.2 0.0 0.00079 19.6 0.0 2.5 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain S1 PF00575.23 gi|21228136|ref|NP_634058.1| - 0.0015 18.9 0.4 0.0015 18.9 0.4 2.2 2 0 0 2 2 2 1 S1 RNA binding domain RMI2 PF16100.5 gi|21228136|ref|NP_634058.1| - 0.0042 16.9 0.0 0.0082 16.0 0.0 1.4 1 0 0 1 1 1 1 RecQ-mediated genome instability protein 2 zf-CHY PF05495.12 gi|21228136|ref|NP_634058.1| - 0.054 14.0 0.6 0.054 14.0 0.6 2.7 1 1 1 2 2 2 0 CHY zinc finger zf-C4pol PF14260.6 gi|21228136|ref|NP_634058.1| - 2.7 8.5 12.3 11 6.6 1.7 2.5 2 0 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta C1_2 PF03107.16 gi|21228136|ref|NP_634058.1| - 7.1 7.0 8.6 0.72 10.2 1.3 2.6 1 1 1 2 2 2 0 C1 domain Pribosyltran PF00156.27 gi|21228137|ref|NP_634059.1| - 2.7e-21 75.7 0.6 4.5e-21 75.0 0.6 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|21228137|ref|NP_634059.1| - 9.2e-07 28.5 1.2 2.2e-05 24.0 0.3 2.1 1 1 1 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.6 gi|21228137|ref|NP_634059.1| - 4.3e-05 23.0 1.2 0.00018 21.0 0.2 1.9 1 1 0 2 2 2 1 Uracil phosphoribosyltransferase HTH_7 PF02796.15 gi|21228137|ref|NP_634059.1| - 0.00026 21.0 0.0 0.0006 19.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Sigma70_r4_2 PF08281.12 gi|21228137|ref|NP_634059.1| - 0.0017 18.0 0.0 0.036 13.7 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 GerE PF00196.19 gi|21228137|ref|NP_634059.1| - 0.0079 15.7 0.0 0.017 14.6 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 gi|21228137|ref|NP_634059.1| - 0.018 14.8 0.0 0.034 14.0 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_11 PF08279.12 gi|21228137|ref|NP_634059.1| - 0.019 14.9 0.1 0.06 13.3 0.0 1.8 2 0 0 2 2 2 0 HTH domain Sigma70_r4 PF04545.16 gi|21228137|ref|NP_634059.1| - 0.079 12.5 0.0 0.24 10.9 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|21228137|ref|NP_634059.1| - 0.11 12.5 0.0 0.31 11.0 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PIN_6 PF17146.4 gi|21228138|ref|NP_634060.1| - 4.3e-13 49.6 0.0 7.8e-13 48.7 0.0 1.4 1 0 0 1 1 1 1 PIN domain of ribonuclease zinc-ribbons_6 PF07191.12 gi|21228138|ref|NP_634060.1| - 0.0021 18.0 0.6 0.0042 17.0 0.6 1.5 1 0 0 1 1 1 1 zinc-ribbons PIN_4 PF13638.6 gi|21228138|ref|NP_634060.1| - 0.0074 16.6 0.3 0.011 16.0 0.3 1.4 1 1 0 1 1 1 1 PIN domain PIN_5 PF08745.11 gi|21228138|ref|NP_634060.1| - 0.015 14.7 0.5 0.055 12.9 0.3 1.6 1 1 1 2 2 2 0 PINc domain ribonuclease Prok-RING_1 PF14446.6 gi|21228138|ref|NP_634060.1| - 0.021 14.8 2.2 0.044 13.7 2.2 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Rad50_zn_hook PF04423.14 gi|21228138|ref|NP_634060.1| - 0.031 14.1 0.7 0.031 14.1 0.7 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif DNA_ligase_ZBD PF03119.16 gi|21228138|ref|NP_634060.1| - 0.049 13.7 0.1 0.1 12.7 0.1 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain zf-C3HC4_3 PF13920.6 gi|21228138|ref|NP_634060.1| - 0.064 13.1 0.8 0.11 12.4 0.8 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn-ribbon_8 PF09723.10 gi|21228138|ref|NP_634060.1| - 0.34 11.1 3.4 1 9.5 3.4 1.8 1 1 0 1 1 1 0 Zinc ribbon domain DUF2072 PF09845.9 gi|21228138|ref|NP_634060.1| - 3 8.1 5.8 5.1 7.4 3.5 2.1 2 0 0 2 2 2 0 Zn-ribbon containing protein DUF169 PF02596.15 gi|21228139|ref|NP_634061.1| - 5.8e-57 193.0 0.1 6.5e-57 192.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 Ribosomal_S8e PF01201.22 gi|21228141|ref|NP_634063.1| - 1.7e-34 118.9 6.2 2e-34 118.7 6.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e AsnC_trans_reg PF01037.21 gi|21228142|ref|NP_634064.1| - 1.5e-16 60.1 0.1 3.5e-16 58.9 0.1 1.6 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|21228142|ref|NP_634064.1| - 5.2e-11 41.9 0.0 1.5e-10 40.4 0.1 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|21228142|ref|NP_634064.1| - 3.1e-10 39.7 0.1 8e-10 38.4 0.0 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21228142|ref|NP_634064.1| - 2.7e-06 27.2 0.1 9.7e-06 25.5 0.1 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|21228142|ref|NP_634064.1| - 1.6e-05 24.9 0.0 2.8e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|21228142|ref|NP_634064.1| - 2.6e-05 24.0 0.0 5e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|21228142|ref|NP_634064.1| - 6.9e-05 22.7 0.1 0.00024 21.0 0.1 1.9 1 1 0 1 1 1 1 HTH domain TFIIE_alpha PF02002.17 gi|21228142|ref|NP_634064.1| - 0.00048 20.0 0.2 0.00088 19.1 0.2 1.4 1 0 0 1 1 1 1 TFIIE alpha subunit MarR PF01047.22 gi|21228142|ref|NP_634064.1| - 0.00089 19.1 0.1 0.0017 18.3 0.1 1.5 1 0 0 1 1 1 1 MarR family DprA_WH PF17782.1 gi|21228142|ref|NP_634064.1| - 0.0017 18.4 0.0 0.0029 17.7 0.0 1.3 1 0 0 1 1 1 1 DprA winged helix domain Fe_dep_repress PF01325.19 gi|21228142|ref|NP_634064.1| - 0.0035 17.5 0.2 0.0089 16.2 0.2 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DUF4423 PF14394.6 gi|21228142|ref|NP_634064.1| - 0.0059 16.3 0.1 0.019 14.7 0.0 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4423) DUF2250 PF10007.9 gi|21228142|ref|NP_634064.1| - 0.01 16.0 0.1 0.017 15.2 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) Rrf2 PF02082.20 gi|21228142|ref|NP_634064.1| - 0.031 14.6 0.1 0.14 12.5 0.1 2.0 2 0 0 2 2 2 0 Transcriptional regulator RPA_C PF08784.11 gi|21228142|ref|NP_634064.1| - 0.033 14.8 0.2 0.077 13.7 0.2 1.6 1 0 0 1 1 1 0 Replication protein A C terminal RepL PF05732.11 gi|21228142|ref|NP_634064.1| - 0.045 13.2 0.1 0.096 12.1 0.1 1.5 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_36 PF13730.6 gi|21228142|ref|NP_634064.1| - 0.058 13.4 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|21228142|ref|NP_634064.1| - 0.063 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|21228142|ref|NP_634064.1| - 0.064 13.1 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain FaeA PF04703.12 gi|21228142|ref|NP_634064.1| - 0.077 13.4 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 FaeA-like protein Rio2_N PF09202.11 gi|21228142|ref|NP_634064.1| - 0.088 13.0 0.1 1.3 9.3 0.0 2.2 2 0 0 2 2 2 0 Rio2, N-terminal DUF501 PF04417.12 gi|21228142|ref|NP_634064.1| - 0.092 12.6 0.1 0.2 11.5 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF501) HTH_27 PF13463.6 gi|21228142|ref|NP_634064.1| - 0.097 13.2 0.1 0.28 11.7 0.1 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain Aminotran_1_2 PF00155.21 gi|21228143|ref|NP_634065.1| - 2e-60 204.9 0.0 2.2e-60 204.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|21228143|ref|NP_634065.1| - 7.2e-12 45.3 0.5 1.1e-11 44.7 0.5 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|21228143|ref|NP_634065.1| - 6.8e-06 25.3 0.0 9.8e-06 24.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|21228143|ref|NP_634065.1| - 0.0042 15.7 0.1 0.0071 14.9 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.20 gi|21228143|ref|NP_634065.1| - 0.0095 14.7 0.0 0.014 14.2 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Alliinase_C PF04864.13 gi|21228143|ref|NP_634065.1| - 0.053 12.4 0.0 0.66 8.8 0.0 2.1 2 0 0 2 2 2 0 Allinase TrmB PF01978.19 gi|21228144|ref|NP_634066.1| - 2.7e-19 68.8 0.2 5e-19 68.0 0.2 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|21228144|ref|NP_634066.1| - 0.00075 19.3 0.7 0.006 16.4 0.1 2.1 1 1 1 2 2 2 2 TFIIE alpha subunit HTH_11 PF08279.12 gi|21228144|ref|NP_634066.1| - 0.0022 17.9 0.0 0.0039 17.1 0.0 1.4 1 0 0 1 1 1 1 HTH domain PvlArgDC PF01862.16 gi|21228144|ref|NP_634066.1| - 0.0031 17.3 0.1 0.004 17.0 0.1 1.2 1 1 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) MarR PF01047.22 gi|21228144|ref|NP_634066.1| - 0.0066 16.4 0.2 0.03 14.2 0.0 2.1 2 1 1 3 3 3 1 MarR family HTH_IclR PF09339.10 gi|21228144|ref|NP_634066.1| - 0.0086 15.9 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|21228144|ref|NP_634066.1| - 0.056 13.3 0.1 0.17 11.8 0.0 1.8 3 0 0 3 3 3 0 MarR family HTH_5 PF01022.20 gi|21228144|ref|NP_634066.1| - 0.071 13.0 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|21228144|ref|NP_634066.1| - 0.11 13.0 0.1 0.52 10.8 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain Arg_decarbox_C PF17944.1 gi|21228144|ref|NP_634066.1| - 0.44 11.1 2.9 18 6.0 0.1 2.6 2 1 1 3 3 3 0 Arginine decarboxylase C-terminal helical extension DUF5591 PF17884.1 gi|21228145|ref|NP_634067.1| - 1.3e-17 64.1 0.2 1.9e-17 63.5 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) EamA PF00892.20 gi|21228148|ref|NP_634070.1| - 1.1e-14 54.8 47.1 1.4e-07 31.8 13.5 3.3 3 1 0 3 3 3 3 EamA-like transporter family B12-binding PF02310.19 gi|21228149|ref|NP_634071.1| - 2e-23 82.7 0.9 3.7e-23 81.9 0.9 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|21228149|ref|NP_634071.1| - 3.7e-20 72.1 1.7 3.7e-20 72.1 1.7 2.6 3 0 0 3 3 3 1 B12 binding domain Nuc_deoxyri_tr3 PF11071.8 gi|21228149|ref|NP_634071.1| - 0.0094 16.0 0.2 0.41 10.7 0.1 2.3 1 1 1 2 2 2 2 Nucleoside 2-deoxyribosyltransferase YtoQ Img2 PF05046.14 gi|21228149|ref|NP_634071.1| - 0.19 12.0 0.8 0.59 10.5 0.4 2.0 2 1 0 2 2 2 0 Mitochondrial large subunit ribosomal protein (Img2) MTTB PF06253.11 gi|21228150|ref|NP_634072.1| - 6.8e-31 106.8 0.0 8.1e-31 106.6 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) MTTB PF06253.11 gi|21228151|ref|NP_634073.1| - 4.9e-55 186.5 0.0 5.8e-55 186.2 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) Dimeth_Pyl PF09505.10 gi|21228152|ref|NP_634074.1| - 1.9e-53 181.7 2.0 2.1e-53 181.5 2.0 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) Dimeth_Pyl PF09505.10 gi|21228153|ref|NP_634075.1| - 8.1e-200 664.2 2.9 9.1e-200 664.0 2.9 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) B12-binding PF02310.19 gi|21228154|ref|NP_634076.1| - 3.3e-26 91.7 0.5 5.8e-26 90.9 0.5 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|21228154|ref|NP_634076.1| - 1.6e-19 70.1 2.0 4.2e-19 68.7 2.0 1.7 1 0 0 1 1 1 1 B12 binding domain UPF0051 PF01458.17 gi|21228156|ref|NP_634078.1| - 2.9e-37 128.5 0.4 3.7e-37 128.1 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ABC_tran PF00005.27 gi|21228157|ref|NP_634079.1| - 3.1e-25 89.3 0.1 4.2e-25 88.9 0.1 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|21228157|ref|NP_634079.1| - 1.1e-11 44.6 0.2 1.9e-07 30.8 0.0 2.0 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|21228157|ref|NP_634079.1| - 6.5e-11 42.6 0.2 6.8e-05 22.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 gi|21228157|ref|NP_634079.1| - 0.0056 15.4 0.0 0.2 10.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|21228157|ref|NP_634079.1| - 0.0072 16.0 0.2 0.018 14.8 0.1 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|21228157|ref|NP_634079.1| - 0.02 15.2 0.1 0.067 13.5 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|21228157|ref|NP_634079.1| - 0.022 14.3 0.0 0.038 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|21228157|ref|NP_634079.1| - 0.027 15.0 0.7 0.051 14.1 0.7 1.8 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|21228157|ref|NP_634079.1| - 0.07 13.3 0.1 0.079 13.1 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|21228157|ref|NP_634079.1| - 0.085 13.1 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|21228157|ref|NP_634079.1| - 0.088 12.0 0.1 6.3 5.9 0.1 2.1 2 0 0 2 2 2 0 NB-ARC domain AAA_15 PF13175.6 gi|21228157|ref|NP_634079.1| - 0.1 12.3 0.4 0.18 11.5 0.4 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 gi|21228157|ref|NP_634079.1| - 0.15 11.8 0.0 1.3 8.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain NTP_transf_3 PF12804.7 gi|21228158|ref|NP_634080.1| - 9.1e-16 58.6 0.0 1.2e-15 58.2 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|21228158|ref|NP_634080.1| - 4.1e-09 36.7 0.0 1.3e-08 35.0 0.0 1.6 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.19 gi|21228158|ref|NP_634080.1| - 1.2e-08 35.0 0.0 2.1e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.23 gi|21228158|ref|NP_634080.1| - 0.00037 20.2 0.0 0.00047 19.8 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase CofC PF01983.16 gi|21228158|ref|NP_634080.1| - 0.03 13.5 0.1 0.038 13.2 0.1 1.3 1 1 0 1 1 1 0 Guanylyl transferase CofC like DUF2064 PF09837.9 gi|21228158|ref|NP_634080.1| - 0.084 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2064) CobS PF02654.15 gi|21228159|ref|NP_634081.1| - 9e-37 127.3 11.9 1.1e-36 127.0 11.9 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase CD225 PF04505.12 gi|21228159|ref|NP_634081.1| - 0.055 13.6 0.9 0.055 13.6 0.9 2.4 3 0 0 3 3 3 0 Interferon-induced transmembrane protein PgpA PF04608.13 gi|21228160|ref|NP_634082.1| - 2.6e-09 37.2 0.0 3.5e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A CobD_Cbib PF03186.13 gi|21228161|ref|NP_634083.1| - 5.4e-91 304.6 0.1 7e-91 304.3 0.1 1.0 1 0 0 1 1 1 1 CobD/Cbib protein AmpE PF17113.5 gi|21228161|ref|NP_634083.1| - 0.0094 15.3 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 1 Regulatory signalling modulator protein AmpE XFP PF03894.15 gi|21228161|ref|NP_634083.1| - 0.13 12.0 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Aminotran_1_2 PF00155.21 gi|21228162|ref|NP_634084.1| - 3.7e-43 148.1 0.0 4.5e-43 147.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II zf-like PF04071.12 gi|21228162|ref|NP_634084.1| - 1.9e-25 88.6 8.2 3.9e-25 87.6 8.2 1.4 1 0 0 1 1 1 1 Cysteine-rich small domain Aminotran_5 PF00266.19 gi|21228162|ref|NP_634084.1| - 0.1 11.5 0.0 0.39 9.6 0.0 1.8 1 1 0 1 1 1 0 Aminotransferase class-V tRNA-synt_His PF13393.6 gi|21228163|ref|NP_634085.1| - 1.4e-57 195.3 0.0 2e-57 194.8 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|21228163|ref|NP_634085.1| - 5.2e-15 55.9 0.0 8.2e-15 55.2 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|21228163|ref|NP_634085.1| - 3.7e-14 52.6 0.1 6.5e-14 51.9 0.1 1.4 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2 PF00152.20 gi|21228163|ref|NP_634085.1| - 4.5e-05 22.7 0.1 0.78 8.8 0.1 3.0 3 0 0 3 3 3 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 gi|21228163|ref|NP_634085.1| - 0.025 14.1 0.0 0.12 11.8 0.0 2.0 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) Ribosomal_S13_N PF08069.12 gi|21228168|ref|NP_634090.1| - 1.2e-25 89.3 0.3 3e-25 88.0 0.3 1.7 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|21228168|ref|NP_634090.1| - 2.9e-16 59.4 0.7 4e-16 59.0 0.7 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 ABC_tran PF00005.27 gi|21228169|ref|NP_634091.1| - 1.6e-29 103.2 0.0 2.1e-29 102.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21228169|ref|NP_634091.1| - 3.6e-11 43.4 1.4 9.5e-05 22.3 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|21228169|ref|NP_634091.1| - 1.7e-05 25.3 0.0 2.7e-05 24.6 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|21228169|ref|NP_634091.1| - 4.6e-05 24.0 0.1 7.5e-05 23.3 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|21228169|ref|NP_634091.1| - 0.0001 22.0 0.0 0.00026 20.7 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|21228169|ref|NP_634091.1| - 0.00041 19.9 0.2 0.5 9.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 gi|21228169|ref|NP_634091.1| - 0.0006 18.7 0.4 0.52 9.1 0.1 3.3 2 2 0 2 2 2 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 gi|21228169|ref|NP_634091.1| - 0.0013 18.6 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 gi|21228169|ref|NP_634091.1| - 0.0018 18.0 0.0 0.0036 17.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|21228169|ref|NP_634091.1| - 0.002 18.6 0.2 0.025 15.0 0.2 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|21228169|ref|NP_634091.1| - 0.003 17.8 0.8 0.025 14.8 0.8 2.2 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|21228169|ref|NP_634091.1| - 0.0078 16.0 0.1 0.015 15.0 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 gi|21228169|ref|NP_634091.1| - 0.0095 16.0 0.1 0.098 12.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|21228169|ref|NP_634091.1| - 0.011 15.0 0.5 0.15 11.3 0.0 2.1 2 1 0 2 2 2 0 NB-ARC domain AAA_24 PF13479.6 gi|21228169|ref|NP_634091.1| - 0.014 15.2 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|21228169|ref|NP_634091.1| - 0.016 14.8 0.2 0.04 13.5 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain NACHT PF05729.12 gi|21228169|ref|NP_634091.1| - 0.023 14.6 0.3 0.057 13.3 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA_33 PF13671.6 gi|21228169|ref|NP_634091.1| - 0.026 14.7 0.1 0.1 12.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|21228169|ref|NP_634091.1| - 0.028 14.3 1.2 0.23 11.4 0.1 2.5 2 1 0 2 2 2 0 NTPase AAA_19 PF13245.6 gi|21228169|ref|NP_634091.1| - 0.029 14.7 1.8 0.35 11.2 1.8 2.2 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|21228169|ref|NP_634091.1| - 0.043 13.8 0.4 1.8 8.5 0.1 2.7 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|21228169|ref|NP_634091.1| - 0.048 14.2 0.1 0.11 13.0 0.1 1.6 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|21228169|ref|NP_634091.1| - 0.055 13.0 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|21228169|ref|NP_634091.1| - 0.062 13.0 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_13 PF13166.6 gi|21228169|ref|NP_634091.1| - 0.065 11.9 0.1 5.3 5.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|21228169|ref|NP_634091.1| - 0.084 12.8 0.0 0.17 11.8 0.0 1.5 2 0 0 2 2 1 0 ATPase domain predominantly from Archaea TniB PF05621.11 gi|21228169|ref|NP_634091.1| - 0.095 12.1 1.0 2.1 7.7 0.5 2.2 2 1 0 2 2 2 0 Bacterial TniB protein AAA_28 PF13521.6 gi|21228169|ref|NP_634091.1| - 0.13 12.5 0.0 0.23 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|21228169|ref|NP_634091.1| - 0.13 11.5 0.0 0.21 10.8 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin Mg_chelatase PF01078.21 gi|21228169|ref|NP_634091.1| - 0.16 11.3 0.0 0.31 10.4 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Rad17 PF03215.15 gi|21228169|ref|NP_634091.1| - 0.18 11.7 0.0 0.4 10.6 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_27 PF13514.6 gi|21228169|ref|NP_634091.1| - 0.19 11.3 0.0 0.28 10.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain FecCD PF01032.18 gi|21228170|ref|NP_634092.1| - 1.1e-91 307.1 34.5 1.3e-91 306.8 34.5 1.0 1 0 0 1 1 1 1 FecCD transport family DUF3796 PF12676.7 gi|21228170|ref|NP_634092.1| - 0.14 12.6 5.5 0.67 10.4 1.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3796) Peripla_BP_2 PF01497.18 gi|21228171|ref|NP_634093.1| - 4.5e-20 72.2 0.1 7.7e-20 71.5 0.1 1.4 1 0 0 1 1 1 1 Periplasmic binding protein Oxidored_nitro PF00148.19 gi|21228171|ref|NP_634093.1| - 0.094 11.4 0.0 0.16 10.7 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase QRPTase_C PF01729.19 gi|21228172|ref|NP_634094.1| - 6.2e-59 198.6 1.3 7.6e-59 198.3 1.3 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|21228172|ref|NP_634094.1| - 2.9e-23 81.7 0.0 6.8e-23 80.5 0.0 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain TMP-TENI PF02581.17 gi|21228172|ref|NP_634094.1| - 0.0081 15.5 0.1 0.013 14.8 0.1 1.4 1 0 0 1 1 1 1 Thiamine monophosphate synthase Biotin_lipoyl_2 PF13533.6 gi|21228172|ref|NP_634094.1| - 0.02 14.7 0.1 0.037 13.8 0.1 1.4 1 0 0 1 1 1 0 Biotin-lipoyl like KDGP_aldolase PF07071.11 gi|21228172|ref|NP_634094.1| - 0.067 13.0 0.3 0.12 12.2 0.2 1.4 1 1 0 1 1 1 0 KDGP aldolase Ribul_P_3_epim PF00834.19 gi|21228172|ref|NP_634094.1| - 0.072 12.5 0.1 0.14 11.5 0.1 1.6 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family Disaggr_repeat PF06848.11 gi|21228173|ref|NP_634095.1| - 8.3e-246 807.5 33.8 1.3e-87 292.1 3.4 3.7 3 0 0 3 3 3 3 Disaggregatase related repeat TGFb_propeptide PF00688.18 gi|21228173|ref|NP_634095.1| - 4.4e-06 26.6 0.0 31 4.2 0.0 6.0 5 1 0 6 6 6 2 TGF-beta propeptide MORN_2 PF07661.13 gi|21228173|ref|NP_634095.1| - 1.8 9.0 13.6 1.9e+02 2.8 0.1 6.7 6 0 0 6 6 6 0 MORN repeat variant DUF108 PF01958.18 gi|21228174|ref|NP_634096.1| - 6.1e-38 129.1 0.2 9.5e-38 128.5 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.16 gi|21228174|ref|NP_634096.1| - 5.6e-19 68.9 0.1 1.4e-18 67.7 0.0 1.7 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain Peptidase_M42 PF05343.14 gi|21228174|ref|NP_634096.1| - 0.044 12.8 0.0 0.06 12.4 0.0 1.2 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase Semialdhyde_dh PF01118.24 gi|21228174|ref|NP_634096.1| - 0.094 13.2 0.1 0.18 12.3 0.0 1.6 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain NadA PF02445.16 gi|21228175|ref|NP_634097.1| - 5.4e-117 390.2 3.4 6.1e-117 390.1 3.4 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein DUF4448 PF14610.6 gi|21228176|ref|NP_634098.1| - 0.039 13.7 0.0 0.091 12.5 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4448) DUF4891 PF16232.5 gi|21228176|ref|NP_634098.1| - 0.067 13.7 0.1 0.13 12.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4891) UbiA PF01040.18 gi|21228177|ref|NP_634099.1| - 4.3e-42 144.2 15.6 5.6e-42 143.8 15.6 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family AdoMet_Synthase PF01941.19 gi|21228178|ref|NP_634100.1| - 4.2e-163 542.8 0.2 4.8e-163 542.6 0.2 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) PIN_5 PF08745.11 gi|21228179|ref|NP_634101.1| - 2.1e-92 308.2 0.1 2.4e-92 308.0 0.1 1.0 1 0 0 1 1 1 1 PINc domain ribonuclease zf-CHY PF05495.12 gi|21228180|ref|NP_634102.1| - 0.0047 17.4 1.5 3.6 8.1 0.1 3.0 3 0 0 3 3 3 1 CHY zinc finger zf_C2H2_13 PF18508.1 gi|21228180|ref|NP_634102.1| - 0.024 14.2 2.2 1.4 8.6 0.9 2.7 2 0 0 2 2 2 0 Zinc finger domain zinc_ribbon_2 PF13240.6 gi|21228180|ref|NP_634102.1| - 0.053 13.3 4.7 3.3 7.6 0.3 3.1 3 0 0 3 3 3 0 zinc-ribbon domain zf-CCHC_2 PF13696.6 gi|21228180|ref|NP_634102.1| - 0.058 13.2 8.3 1 9.3 0.1 3.2 3 0 0 3 3 3 0 Zinc knuckle DZR PF12773.7 gi|21228180|ref|NP_634102.1| - 0.076 13.1 4.6 0.21 11.6 0.7 2.6 1 1 1 2 2 2 0 Double zinc ribbon A2L_zn_ribbon PF08792.10 gi|21228180|ref|NP_634102.1| - 0.18 11.6 9.8 1.1 9.0 0.3 3.6 4 0 0 4 4 4 0 A2L zinc ribbon domain zf_UBZ PF18439.1 gi|21228180|ref|NP_634102.1| - 0.27 10.9 5.7 0.27 10.8 0.2 2.9 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-RING_5 PF14634.6 gi|21228180|ref|NP_634102.1| - 0.55 10.2 8.7 6.3 6.8 1.4 3.3 3 0 0 3 3 3 0 zinc-RING finger domain zinc-ribbons_6 PF07191.12 gi|21228180|ref|NP_634102.1| - 1.4 8.9 7.0 3.9 7.5 1.8 2.8 1 1 2 3 3 3 0 zinc-ribbons Thioredoxin PF00085.20 gi|21228181|ref|NP_634103.1| - 1.1e-21 76.8 0.0 1.2e-21 76.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|21228181|ref|NP_634103.1| - 1.2e-10 41.8 0.4 4.8e-10 39.9 0.4 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 gi|21228181|ref|NP_634103.1| - 4.1e-06 26.8 0.0 6.4e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain AhpC-TSA PF00578.21 gi|21228181|ref|NP_634103.1| - 4.7e-05 23.3 0.1 7e-05 22.7 0.1 1.3 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|21228181|ref|NP_634103.1| - 6.1e-05 22.8 0.0 7.5e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Redoxin DSBA PF01323.20 gi|21228181|ref|NP_634103.1| - 8.7e-05 22.4 0.9 0.017 14.9 0.2 2.1 1 1 1 2 2 2 2 DSBA-like thioredoxin domain TraF PF13728.6 gi|21228181|ref|NP_634103.1| - 0.00016 21.6 0.0 0.00022 21.1 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_4 PF13462.6 gi|21228181|ref|NP_634103.1| - 0.0003 21.0 1.6 0.043 14.0 0.9 2.3 1 1 0 2 2 2 1 Thioredoxin Thioredoxin_7 PF13899.6 gi|21228181|ref|NP_634103.1| - 0.0007 19.7 0.0 0.001 19.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Glutaredoxin PF00462.24 gi|21228181|ref|NP_634103.1| - 0.0028 17.8 0.0 0.0043 17.2 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin OST3_OST6 PF04756.13 gi|21228181|ref|NP_634103.1| - 0.0034 16.8 0.0 0.0035 16.7 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_5 PF13743.6 gi|21228181|ref|NP_634103.1| - 0.028 14.1 0.2 0.43 10.2 0.1 2.0 1 1 1 2 2 2 0 Thioredoxin Thioredoxin_8 PF13905.6 gi|21228181|ref|NP_634103.1| - 0.081 13.3 0.0 0.36 11.2 0.0 2.0 1 1 1 2 2 2 0 Thioredoxin-like DUF836 PF05768.14 gi|21228181|ref|NP_634103.1| - 0.11 13.0 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) UPF0014 PF03649.13 gi|21228182|ref|NP_634104.1| - 2.2e-70 236.8 15.1 2.4e-70 236.6 15.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) DUF2109 PF09882.9 gi|21228182|ref|NP_634104.1| - 1.8 8.6 8.0 2.2 8.4 0.9 2.5 2 0 0 2 2 2 0 Predicted membrane protein (DUF2109) ABC_tran PF00005.27 gi|21228183|ref|NP_634105.1| - 6.8e-29 101.1 0.0 9.6e-29 100.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|21228183|ref|NP_634105.1| - 2.2e-06 27.3 0.1 1.1e-05 25.0 0.0 1.8 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|21228183|ref|NP_634105.1| - 0.00019 21.3 1.7 0.15 11.9 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|21228183|ref|NP_634105.1| - 0.00062 19.7 0.0 0.001 19.0 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_7 PF12775.7 gi|21228183|ref|NP_634105.1| - 0.0025 17.3 0.1 0.0043 16.6 0.1 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_29 PF13555.6 gi|21228183|ref|NP_634105.1| - 0.0037 17.0 0.2 0.0077 16.0 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF815 PF05673.13 gi|21228183|ref|NP_634105.1| - 0.015 14.4 0.2 0.03 13.5 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) SbcCD_C PF13558.6 gi|21228183|ref|NP_634105.1| - 0.016 15.5 0.8 0.52 10.6 0.1 2.6 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit AAA_5 PF07728.14 gi|21228183|ref|NP_634105.1| - 0.021 14.8 0.4 0.65 10.0 0.1 2.7 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|21228183|ref|NP_634105.1| - 0.048 14.2 0.2 0.085 13.4 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|21228183|ref|NP_634105.1| - 0.081 13.1 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 gi|21228183|ref|NP_634105.1| - 0.083 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain DLIC PF05783.11 gi|21228183|ref|NP_634105.1| - 0.1 11.4 0.1 0.15 10.9 0.1 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) MCM PF00493.23 gi|21228183|ref|NP_634105.1| - 0.11 11.5 0.1 0.23 10.5 0.0 1.5 2 0 0 2 2 2 0 MCM P-loop domain RNA_helicase PF00910.22 gi|21228183|ref|NP_634105.1| - 0.14 12.5 0.1 0.25 11.7 0.1 1.4 1 0 0 1 1 1 0 RNA helicase ABC_ATPase PF09818.9 gi|21228183|ref|NP_634105.1| - 0.16 10.8 0.3 0.71 8.6 0.0 1.8 2 0 0 2 2 2 0 Predicted ATPase of the ABC class MMR_HSR1 PF01926.23 gi|21228183|ref|NP_634105.1| - 0.18 11.9 0.7 0.5 10.5 0.7 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase DS PF01916.17 gi|21228184|ref|NP_634106.1| - 7.9e-101 337.1 0.0 9e-101 336.9 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase OMPdecase PF00215.24 gi|21228185|ref|NP_634107.1| - 1.6e-42 145.6 0.5 2.1e-42 145.3 0.5 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PcrB PF01884.17 gi|21228185|ref|NP_634107.1| - 0.0005 19.6 1.1 0.23 10.9 0.1 2.7 2 1 1 3 3 3 2 PcrB family Ribul_P_3_epim PF00834.19 gi|21228185|ref|NP_634107.1| - 0.013 14.9 0.1 0.058 12.8 0.1 1.7 1 1 1 2 2 2 0 Ribulose-phosphate 3 epimerase family NanE PF04131.14 gi|21228185|ref|NP_634107.1| - 0.023 13.9 3.1 3.8 6.6 0.0 3.2 2 2 2 4 4 4 0 Putative N-acetylmannosamine-6-phosphate epimerase HMGL-like PF00682.19 gi|21228185|ref|NP_634107.1| - 0.033 13.8 0.2 0.093 12.3 0.2 1.8 1 1 0 1 1 1 0 HMGL-like CdhD PF03599.16 gi|21228186|ref|NP_634108.1| - 1.6e-158 527.5 0.3 1.8e-158 527.3 0.3 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.13 gi|21228186|ref|NP_634108.1| - 6.6e-14 51.3 2.4 1.9e-13 49.8 2.4 1.8 1 0 0 1 1 1 1 Putative Fe-S cluster Pterin_bind PF00809.22 gi|21228186|ref|NP_634108.1| - 0.0043 16.8 0.0 0.1 12.3 0.0 2.2 1 1 0 1 1 1 1 Pterin binding enzyme MOFRL PF05161.13 gi|21228186|ref|NP_634108.1| - 0.12 12.6 0.2 0.23 11.7 0.2 1.4 1 0 0 1 1 1 0 MOFRL family CdhD PF03599.16 gi|21228187|ref|NP_634109.1| - 1.5e-92 310.3 2.1 6.1e-85 285.3 0.1 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit CbiA PF01656.23 gi|21228188|ref|NP_634110.1| - 1.3e-17 64.0 0.0 2.2e-17 63.3 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|21228188|ref|NP_634110.1| - 3e-15 56.6 0.1 5.8e-15 55.7 0.1 1.4 1 1 0 1 1 1 1 AAA domain ParA PF10609.9 gi|21228188|ref|NP_634110.1| - 5.1e-11 42.5 0.9 0.00013 21.5 0.1 2.4 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|21228188|ref|NP_634110.1| - 1.2e-09 38.0 2.2 4.6e-09 36.1 2.2 1.8 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|21228188|ref|NP_634110.1| - 3.5e-07 30.0 0.0 0.0013 18.3 0.0 2.4 3 0 0 3 3 3 2 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|21228188|ref|NP_634110.1| - 1.4e-06 27.7 2.5 1.9e-05 24.0 2.5 2.3 1 1 0 1 1 1 1 Anion-transporting ATPase NTPase_1 PF03266.15 gi|21228188|ref|NP_634110.1| - 2.1e-05 24.5 0.7 0.17 11.8 0.3 2.2 2 0 0 2 2 2 2 NTPase MipZ PF09140.11 gi|21228188|ref|NP_634110.1| - 0.0002 20.7 0.2 0.02 14.2 0.0 2.4 2 1 0 2 2 2 1 ATPase MipZ AAA_16 PF13191.6 gi|21228188|ref|NP_634110.1| - 0.00041 20.8 0.1 0.00056 20.3 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_26 PF13500.6 gi|21228188|ref|NP_634110.1| - 0.00076 19.3 4.4 0.076 12.8 0.3 2.5 2 1 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|21228188|ref|NP_634110.1| - 0.00088 19.1 0.1 0.0023 17.7 0.1 1.7 1 1 0 1 1 1 1 AAA domain Toprim PF01751.22 gi|21228188|ref|NP_634110.1| - 0.0013 19.0 0.1 0.026 14.7 0.0 2.3 2 0 0 2 2 2 1 Toprim domain DUF87 PF01935.17 gi|21228188|ref|NP_634110.1| - 0.0033 17.5 4.0 0.0074 16.4 0.7 2.3 2 1 0 2 2 2 1 Helicase HerA, central domain AAA_30 PF13604.6 gi|21228188|ref|NP_634110.1| - 0.0043 16.8 0.4 0.0098 15.6 0.4 1.8 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 gi|21228188|ref|NP_634110.1| - 0.008 15.9 0.2 0.08 12.7 0.0 2.1 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 gi|21228188|ref|NP_634110.1| - 0.008 16.1 0.1 0.015 15.2 0.1 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_22 PF13401.6 gi|21228188|ref|NP_634110.1| - 0.011 16.0 0.2 0.028 14.7 0.2 2.0 1 1 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|21228188|ref|NP_634110.1| - 0.016 15.2 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit PEPcase_2 PF14010.6 gi|21228188|ref|NP_634110.1| - 0.036 12.6 0.7 0.049 12.1 0.7 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase ABC_tran PF00005.27 gi|21228188|ref|NP_634110.1| - 0.037 14.6 0.1 0.079 13.5 0.1 1.6 1 1 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 gi|21228188|ref|NP_634110.1| - 0.04 13.2 0.1 0.071 12.4 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin BORCS6 PF10157.9 gi|21228188|ref|NP_634110.1| - 0.041 14.1 0.1 0.062 13.5 0.1 1.3 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 TrwB_AAD_bind PF10412.9 gi|21228188|ref|NP_634110.1| - 0.046 12.6 0.5 0.081 11.8 0.5 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_18 PF13238.6 gi|21228188|ref|NP_634110.1| - 0.051 14.1 0.4 0.093 13.3 0.2 1.8 1 1 0 1 1 1 0 AAA domain BLYB PF05289.11 gi|21228188|ref|NP_634110.1| - 0.051 13.8 0.6 0.51 10.6 0.0 2.6 3 0 0 3 3 3 0 Borrelia hemolysin accessory protein DUF2075 PF09848.9 gi|21228188|ref|NP_634110.1| - 0.054 12.7 0.0 0.08 12.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Toprim_4 PF13662.6 gi|21228188|ref|NP_634110.1| - 0.058 13.9 0.1 0.38 11.3 0.0 2.1 2 0 0 2 2 2 0 Toprim domain MobB PF03205.14 gi|21228188|ref|NP_634110.1| - 0.061 13.2 0.1 0.14 12.0 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B DUF853 PF05872.12 gi|21228188|ref|NP_634110.1| - 0.063 11.9 0.1 0.091 11.3 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) HTH_19 PF12844.7 gi|21228188|ref|NP_634110.1| - 0.068 13.2 0.3 0.23 11.5 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain ATPase PF06745.13 gi|21228188|ref|NP_634110.1| - 0.072 12.4 0.4 0.43 9.9 0.0 2.2 2 1 0 2 2 2 0 KaiC SRP54 PF00448.22 gi|21228188|ref|NP_634110.1| - 0.072 12.7 3.3 0.48 10.0 0.9 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_19 PF13245.6 gi|21228188|ref|NP_634110.1| - 0.074 13.4 3.7 0.35 11.2 1.4 2.5 1 1 1 2 2 2 0 AAA domain Helicase_RecD PF05127.14 gi|21228188|ref|NP_634110.1| - 0.075 12.9 0.0 0.15 11.9 0.0 1.6 2 0 0 2 2 1 0 Helicase PIF1 PF05970.14 gi|21228188|ref|NP_634110.1| - 0.084 12.0 0.1 0.14 11.3 0.1 1.3 1 0 0 1 1 1 0 PIF1-like helicase RecA PF00154.21 gi|21228188|ref|NP_634110.1| - 0.092 12.2 0.2 2 7.8 0.1 2.2 2 0 0 2 2 2 0 recA bacterial DNA recombination protein NACHT PF05729.12 gi|21228188|ref|NP_634110.1| - 0.11 12.4 0.1 0.17 11.8 0.1 1.5 1 1 0 1 1 1 0 NACHT domain AAA_7 PF12775.7 gi|21228188|ref|NP_634110.1| - 0.12 11.9 0.1 0.26 10.8 0.1 1.5 2 0 0 2 2 1 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|21228188|ref|NP_634110.1| - 0.12 12.1 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Pox_A32 PF04665.12 gi|21228188|ref|NP_634110.1| - 0.12 11.8 0.0 3.1 7.2 0.0 2.2 2 0 0 2 2 2 0 Poxvirus A32 protein TIP49 PF06068.13 gi|21228188|ref|NP_634110.1| - 0.12 11.5 0.3 0.12 11.5 0.3 1.8 2 1 0 2 2 2 0 TIP49 P-loop domain VirC1 PF07015.11 gi|21228188|ref|NP_634110.1| - 0.15 11.4 0.7 3.3 7.0 0.1 2.7 3 0 0 3 3 3 0 VirC1 protein RNA_helicase PF00910.22 gi|21228188|ref|NP_634110.1| - 0.15 12.4 0.0 1.1 9.7 0.0 2.3 3 0 0 3 3 2 0 RNA helicase MeaB PF03308.16 gi|21228188|ref|NP_634110.1| - 0.17 10.9 1.5 0.51 9.3 0.1 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 gi|21228188|ref|NP_634110.1| - 1.1 8.9 5.3 0.58 9.7 1.1 2.5 2 2 1 3 3 3 0 AAA domain CdhC PF03598.15 gi|21228189|ref|NP_634111.1| - 2.3e-61 206.2 0.0 3.7e-61 205.6 0.0 1.3 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit HP0268 PF18618.1 gi|21228189|ref|NP_634111.1| - 0.01 16.2 1.8 0.25 11.8 0.6 2.6 2 1 0 2 2 2 0 HP0268 CO_dh PF02552.16 gi|21228190|ref|NP_634112.1| - 5.6e-30 104.3 0.0 6.5e-30 104.1 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.22 gi|21228190|ref|NP_634112.1| - 4.3e-09 36.2 0.0 5.5e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Prismane PF03063.20 gi|21228191|ref|NP_634113.1| - 1.6e-103 347.2 0.9 7.6e-85 285.5 0.0 2.1 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_21 PF14697.6 gi|21228191|ref|NP_634113.1| - 9.6e-06 25.6 6.1 9.6e-06 25.6 6.1 2.4 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21228191|ref|NP_634113.1| - 1.3e-05 25.3 9.8 1.3e-05 25.3 9.8 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21228191|ref|NP_634113.1| - 7.8e-05 23.2 8.2 7.8e-05 23.2 8.2 2.7 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21228191|ref|NP_634113.1| - 0.00017 21.9 8.4 0.00017 21.9 8.4 2.5 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21228191|ref|NP_634113.1| - 0.0026 17.5 24.1 0.017 14.9 2.8 3.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21228191|ref|NP_634113.1| - 0.007 16.4 24.7 0.036 14.2 2.4 4.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21228191|ref|NP_634113.1| - 0.0074 16.5 7.1 0.057 13.6 0.2 2.8 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21228191|ref|NP_634113.1| - 0.011 15.8 3.5 0.011 15.8 3.5 3.3 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21228191|ref|NP_634113.1| - 0.012 16.1 0.8 0.012 16.1 0.8 3.5 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21228191|ref|NP_634113.1| - 0.055 14.0 0.9 0.029 14.9 11.5 3.5 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21228191|ref|NP_634113.1| - 0.11 13.3 0.5 0.11 13.3 0.5 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain CODH_A_N PF18537.1 gi|21228191|ref|NP_634113.1| - 0.11 12.5 0.0 0.28 11.2 0.0 1.7 1 0 0 1 1 1 0 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Glyco_transf_28 PF03033.20 gi|21228191|ref|NP_634113.1| - 0.18 11.9 0.0 0.35 10.9 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain Fer4_10 PF13237.6 gi|21228191|ref|NP_634113.1| - 1.1 9.4 24.6 0.081 13.1 14.2 3.4 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21228191|ref|NP_634113.1| - 3.7 8.2 11.6 2.3 8.8 1.9 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I DUF134 PF02001.16 gi|21228192|ref|NP_634114.1| - 8.6e-24 83.9 0.0 1.3e-23 83.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4_2 PF08281.12 gi|21228192|ref|NP_634114.1| - 8.1e-07 28.6 0.0 1.3e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Zn-ribbon_8 PF09723.10 gi|21228192|ref|NP_634114.1| - 0.00014 21.9 0.5 0.00014 21.9 0.5 1.8 2 0 0 2 2 1 1 Zinc ribbon domain HTH_10 PF04967.12 gi|21228192|ref|NP_634114.1| - 0.0021 17.8 0.0 0.0033 17.2 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain HTH_29 PF13551.6 gi|21228192|ref|NP_634114.1| - 0.003 17.5 0.1 0.0054 16.7 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HypA PF01155.19 gi|21228192|ref|NP_634114.1| - 0.0036 17.3 3.7 0.0037 17.3 0.2 2.3 2 1 1 3 3 3 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HTH_1 PF00126.27 gi|21228192|ref|NP_634114.1| - 0.013 15.4 0.0 0.022 14.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF4379 PF14311.6 gi|21228192|ref|NP_634114.1| - 0.019 15.3 2.5 0.043 14.2 2.5 1.6 1 0 0 1 1 1 0 Probable Zinc-ribbon domain HTH_23 PF13384.6 gi|21228192|ref|NP_634114.1| - 0.023 14.5 0.1 0.05 13.4 0.1 1.6 1 0 0 1 1 1 0 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|21228192|ref|NP_634114.1| - 0.051 13.1 0.1 0.099 12.2 0.1 1.5 1 1 0 1 1 1 0 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|21228192|ref|NP_634114.1| - 0.13 12.2 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 ECF sigma factor HTH_8 PF02954.19 gi|21228192|ref|NP_634114.1| - 0.15 11.9 0.0 0.28 11.0 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family MCM_OB PF17207.3 gi|21228192|ref|NP_634114.1| - 0.27 11.1 2.3 0.24 11.3 0.7 1.7 1 1 1 2 2 2 0 MCM OB domain TFIIS_C PF01096.18 gi|21228192|ref|NP_634114.1| - 4.2 7.3 8.2 15 5.6 1.8 3.2 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) MS_channel PF00924.18 gi|21228193|ref|NP_634115.1| - 2.5e-25 89.2 2.6 3.7e-25 88.7 2.6 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF2730 PF10805.8 gi|21228193|ref|NP_634115.1| - 0.0093 16.0 0.5 0.0093 16.0 0.5 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF2730) GTP-bdg_M PF16360.5 gi|21228193|ref|NP_634115.1| - 0.016 15.8 1.4 0.016 15.8 1.4 2.4 2 0 0 2 2 2 0 GTP-binding GTPase Middle Region DUF1697 PF08002.11 gi|21228193|ref|NP_634115.1| - 0.18 12.3 0.9 0.47 10.9 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1697) Atg14 PF10186.9 gi|21228193|ref|NP_634115.1| - 1.2 8.2 7.3 1.7 7.6 7.3 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fmp27_WPPW PF10359.9 gi|21228193|ref|NP_634115.1| - 4.4 6.0 6.1 6.7 5.4 6.1 1.3 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain CbiA PF01656.23 gi|21228194|ref|NP_634116.1| - 1.9e-10 40.9 0.0 4.6e-10 39.7 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|21228194|ref|NP_634116.1| - 7.7e-07 28.8 0.4 4e-05 23.2 0.1 2.7 2 1 1 3 3 3 1 NUBPL iron-transfer P-loop NTPase DUF87 PF01935.17 gi|21228194|ref|NP_634116.1| - 2e-05 24.8 0.2 4.8e-05 23.6 0.1 1.5 1 1 0 1 1 1 1 Helicase HerA, central domain ArsA_ATPase PF02374.15 gi|21228194|ref|NP_634116.1| - 4.8e-05 22.7 0.2 0.00013 21.2 0.2 1.6 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.6 gi|21228194|ref|NP_634116.1| - 7e-05 22.8 0.7 0.00039 20.4 0.1 2.3 3 0 0 3 3 3 1 AAA domain Fer4_NifH PF00142.18 gi|21228194|ref|NP_634116.1| - 0.00012 21.6 0.6 0.0012 18.3 0.1 2.2 2 1 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Zeta_toxin PF06414.12 gi|21228194|ref|NP_634116.1| - 0.00012 21.4 0.0 0.00021 20.7 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_24 PF13479.6 gi|21228194|ref|NP_634116.1| - 0.00023 20.9 0.2 0.0021 17.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.20 gi|21228194|ref|NP_634116.1| - 0.001 19.0 0.0 0.0017 18.3 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase CBP_BcsQ PF06564.12 gi|21228194|ref|NP_634116.1| - 0.0016 17.9 0.0 0.065 12.7 0.0 2.1 1 1 0 2 2 2 1 Cellulose biosynthesis protein BcsQ SRP54 PF00448.22 gi|21228194|ref|NP_634116.1| - 0.0032 17.1 0.1 0.029 14.0 0.1 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain TrkA_N PF02254.18 gi|21228194|ref|NP_634116.1| - 0.0046 17.2 0.0 0.78 10.0 0.0 2.3 2 0 0 2 2 2 1 TrkA-N domain AAA_18 PF13238.6 gi|21228194|ref|NP_634116.1| - 0.0076 16.8 0.1 0.016 15.8 0.1 1.6 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|21228194|ref|NP_634116.1| - 0.0083 16.6 0.0 0.013 16.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter NB-ARC PF00931.22 gi|21228194|ref|NP_634116.1| - 0.022 14.0 0.2 0.036 13.2 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain CLP1_P PF16575.5 gi|21228194|ref|NP_634116.1| - 0.026 14.3 0.0 0.061 13.1 0.0 1.7 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_25 PF13481.6 gi|21228194|ref|NP_634116.1| - 0.029 13.9 0.0 0.31 10.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|21228194|ref|NP_634116.1| - 0.034 13.7 0.3 6.4 6.3 0.0 2.5 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain MipZ PF09140.11 gi|21228194|ref|NP_634116.1| - 0.036 13.3 0.1 0.13 11.5 0.0 1.8 2 0 0 2 2 2 0 ATPase MipZ MMR_HSR1 PF01926.23 gi|21228194|ref|NP_634116.1| - 0.047 13.8 0.1 3.1 7.9 0.1 2.4 2 0 0 2 2 2 0 50S ribosome-binding GTPase MeaB PF03308.16 gi|21228194|ref|NP_634116.1| - 0.048 12.6 0.0 0.08 11.9 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB KTI12 PF08433.10 gi|21228194|ref|NP_634116.1| - 0.051 13.0 0.3 0.16 11.4 0.0 1.8 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_26 PF13500.6 gi|21228194|ref|NP_634116.1| - 0.061 13.1 0.9 6.7 6.5 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|21228194|ref|NP_634116.1| - 0.062 13.5 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|21228194|ref|NP_634116.1| - 0.066 13.6 0.0 0.17 12.3 0.1 1.7 2 0 0 2 2 1 0 RNA helicase PRK PF00485.18 gi|21228194|ref|NP_634116.1| - 0.098 12.4 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.6 gi|21228194|ref|NP_634116.1| - 0.11 12.9 0.0 0.2 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 gi|21228194|ref|NP_634116.1| - 0.15 11.7 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain TPP_enzyme_C PF02775.21 gi|21228195|ref|NP_634117.1| - 4.4e-28 98.0 0.3 7.3e-28 97.3 0.3 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|21228195|ref|NP_634117.1| - 2.8e-12 46.9 0.1 1.3e-11 44.7 0.1 1.9 1 1 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|21228195|ref|NP_634117.1| - 2.1e-08 33.6 14.7 3.1e-05 23.6 2.4 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain TPP_enzyme_N PF02776.18 gi|21228195|ref|NP_634117.1| - 3.2e-06 26.9 0.0 1.5e-05 24.6 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_21 PF14697.6 gi|21228195|ref|NP_634117.1| - 0.00013 22.0 13.0 0.00037 20.6 13.0 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21228195|ref|NP_634117.1| - 0.0014 18.6 18.3 0.0028 17.6 2.8 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21228195|ref|NP_634117.1| - 0.0015 18.6 14.8 0.0035 17.4 14.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Transket_pyr PF02779.24 gi|21228195|ref|NP_634117.1| - 0.014 15.1 0.0 0.19 11.4 0.0 2.2 2 0 0 2 2 2 0 Transketolase, pyrimidine binding domain Fer4_9 PF13187.6 gi|21228195|ref|NP_634117.1| - 0.014 15.6 16.4 0.014 15.5 14.9 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21228195|ref|NP_634117.1| - 0.037 14.6 15.4 0.25 12.0 14.8 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21228195|ref|NP_634117.1| - 0.048 13.7 21.7 0.21 11.7 4.6 3.5 2 1 1 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21228195|ref|NP_634117.1| - 2 9.1 22.0 0.24 12.0 3.3 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|21228195|ref|NP_634117.1| - 3.1 8.6 14.0 1.7 9.4 2.8 3.0 1 1 1 2 2 2 0 4Fe-4S single cluster domain POR PF01558.18 gi|21228196|ref|NP_634118.1| - 2.1e-40 138.7 0.6 2.4e-40 138.5 0.6 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase VanZ PF04892.12 gi|21228197|ref|NP_634119.1| - 2.6e-07 31.3 8.2 3.6e-07 30.9 8.2 1.2 1 0 0 1 1 1 1 VanZ like family LapA_dom PF06305.11 gi|21228197|ref|NP_634119.1| - 0.025 14.4 1.2 0.57 10.0 0.2 2.6 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DUF2407_C PF13373.6 gi|21228197|ref|NP_634119.1| - 0.15 12.2 0.6 17 5.6 0.0 2.2 2 0 0 2 2 2 0 DUF2407 C-terminal domain Glycos_transf_4 PF00953.21 gi|21228198|ref|NP_634120.1| - 8.5e-26 90.8 15.4 8.5e-26 90.8 15.4 2.2 2 1 0 2 2 2 1 Glycosyl transferase family 4 RELT PF12606.8 gi|21228198|ref|NP_634120.1| - 4.8 6.3 9.9 0.89 8.6 2.3 2.6 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 Cohesin PF00963.18 gi|21228199|ref|NP_634121.1| - 9.4e-20 71.3 4.7 1.2e-19 71.0 4.7 1.1 1 0 0 1 1 1 1 Cohesin domain Chordopox_A33R PF05966.12 gi|21228199|ref|NP_634121.1| - 0.12 11.7 0.1 0.15 11.3 0.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus A33R protein Big_9 PF17963.1 gi|21228200|ref|NP_634122.1| - 1.8e-10 41.4 7.3 1e-06 29.4 0.2 3.3 2 1 1 3 3 3 2 Bacterial Ig domain Dockerin_1 PF00404.18 gi|21228200|ref|NP_634122.1| - 2.4e-10 40.4 0.3 1e-09 38.4 0.1 2.1 2 0 0 2 2 2 1 Dockerin type I domain He_PIG PF05345.12 gi|21228200|ref|NP_634122.1| - 1.6e-07 31.4 0.5 1.6e-07 31.4 0.5 4.0 5 1 0 5 5 5 1 Putative Ig domain Cadherin_5 PF17892.1 gi|21228200|ref|NP_634122.1| - 8.8e-07 28.8 2.4 7.6e-05 22.6 0.2 2.9 2 1 0 2 2 2 2 Cadherin-like domain Big_7 PF17957.1 gi|21228200|ref|NP_634122.1| - 7.7e-05 23.4 0.1 7.7e-05 23.4 0.1 3.8 4 1 0 4 4 4 1 Bacterial Ig domain EF-hand_1 PF00036.32 gi|21228200|ref|NP_634122.1| - 0.027 14.0 0.4 2.9 7.6 0.1 3.0 2 0 0 2 2 2 0 EF hand EF-hand_6 PF13405.6 gi|21228200|ref|NP_634122.1| - 0.26 11.3 1.4 11 6.3 0.1 3.0 3 0 0 3 3 3 0 EF-hand domain EF-hand_5 PF13202.6 gi|21228200|ref|NP_634122.1| - 9.6 5.9 6.7 4.3 7.0 0.0 2.9 3 0 0 3 3 3 0 EF hand Acyl_transf_3 PF01757.22 gi|21228201|ref|NP_634123.1| - 1.2e-25 90.4 43.0 1.6e-25 89.9 43.0 1.1 1 0 0 1 1 1 1 Acyltransferase family PIG-L PF02585.17 gi|21228202|ref|NP_634124.1| - 1.6e-07 32.0 0.0 2.6e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase Polysacc_synt PF01943.17 gi|21228203|ref|NP_634125.1| - 1.1e-31 110.2 34.8 1.1e-31 110.2 34.8 2.5 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|21228203|ref|NP_634125.1| - 2.9e-24 85.8 22.2 2.9e-24 85.8 22.2 2.6 3 0 0 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|21228203|ref|NP_634125.1| - 2.2e-19 69.9 57.0 3.3e-18 66.1 19.1 3.4 3 0 0 3 3 3 3 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|21228203|ref|NP_634125.1| - 1.3e-11 44.5 15.9 1.3e-11 44.5 15.9 4.7 4 2 1 5 5 5 1 MatE Glycos_transf_2 PF00535.26 gi|21228204|ref|NP_634126.1| - 5.1e-28 98.0 0.1 7.8e-28 97.4 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21228204|ref|NP_634126.1| - 3.5e-14 53.2 0.0 4.6e-14 52.9 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|21228204|ref|NP_634126.1| - 1.8e-10 40.8 1.6 1.1e-09 38.2 0.9 2.4 2 1 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.6 gi|21228204|ref|NP_634126.1| - 0.0076 16.0 0.2 0.011 15.5 0.2 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family GNT-I PF03071.15 gi|21228204|ref|NP_634126.1| - 0.014 14.1 0.1 0.02 13.7 0.1 1.1 1 0 0 1 1 1 0 GNT-I family Glyco_tranf_2_4 PF13704.6 gi|21228204|ref|NP_634126.1| - 0.041 14.4 0.0 0.077 13.5 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 2 Apocytochr_F_N PF16639.5 gi|21228204|ref|NP_634126.1| - 0.059 13.7 0.2 0.099 12.9 0.2 1.3 1 0 0 1 1 1 0 Apocytochrome F, N-terminal Profilin PF00235.19 gi|21228204|ref|NP_634126.1| - 0.068 13.4 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 Profilin Methyltransf_23 PF13489.6 gi|21228205|ref|NP_634127.1| - 2.4e-08 34.0 0.0 3.7e-08 33.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21228205|ref|NP_634127.1| - 2.5e-08 34.4 0.0 4.2e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21228205|ref|NP_634127.1| - 8.3e-06 26.5 0.0 1.7e-05 25.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21228205|ref|NP_634127.1| - 1.7e-05 24.7 0.0 2.4e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|21228205|ref|NP_634127.1| - 0.00048 19.8 0.1 0.0026 17.4 0.1 2.1 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_25 PF13649.6 gi|21228205|ref|NP_634127.1| - 0.00075 20.2 0.0 0.0016 19.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21228205|ref|NP_634127.1| - 0.0044 16.4 0.0 0.0053 16.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family DUF236 PF03057.14 gi|21228205|ref|NP_634127.1| - 0.088 12.8 0.1 0.2 11.7 0.1 1.5 1 0 0 1 1 1 0 DUF236 repeat Acyl_transf_3 PF01757.22 gi|21228206|ref|NP_634128.1| - 6e-18 65.0 42.0 6e-18 65.0 42.0 1.4 2 0 0 2 2 2 1 Acyltransferase family Glycos_transf_1 PF00534.20 gi|21228207|ref|NP_634129.1| - 4.3e-28 98.0 0.2 7.7e-28 97.2 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21228207|ref|NP_634129.1| - 1.5e-21 77.2 0.0 2.3e-21 76.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21228207|ref|NP_634129.1| - 1.2e-20 74.2 0.0 1.5e-20 73.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|21228207|ref|NP_634129.1| - 8.7e-05 22.6 1.7 8.7e-05 22.6 1.7 1.7 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.6 gi|21228207|ref|NP_634129.1| - 0.0063 17.0 0.0 0.0091 16.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|21228208|ref|NP_634130.1| - 4.9e-46 156.4 0.3 8.6e-46 155.6 0.3 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21228208|ref|NP_634130.1| - 2.3e-31 109.0 0.0 3.5e-31 108.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 gi|21228208|ref|NP_634130.1| - 7.7e-05 21.7 0.0 0.00037 19.5 0.0 2.0 2 1 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_4 PF13439.6 gi|21228208|ref|NP_634130.1| - 0.00013 22.0 0.0 0.00032 20.7 0.0 1.6 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|21228208|ref|NP_634130.1| - 0.0016 18.8 0.0 0.0036 17.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycogen_syn PF05693.13 gi|21228208|ref|NP_634130.1| - 0.07 11.7 0.3 0.12 10.9 0.1 1.5 2 0 0 2 2 2 0 Glycogen synthase Metallophos PF00149.28 gi|21228208|ref|NP_634130.1| - 0.18 12.3 0.0 0.42 11.1 0.0 1.6 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase Glycos_transf_1 PF00534.20 gi|21228209|ref|NP_634131.1| - 4.1e-26 91.5 0.1 7.1e-26 90.8 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21228209|ref|NP_634131.1| - 3.7e-17 63.0 0.0 7e-17 62.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21228209|ref|NP_634131.1| - 4.5e-05 23.5 0.0 0.00014 21.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 DUF4179 PF13786.6 gi|21228210|ref|NP_634132.1| - 0.13 12.8 2.2 16 6.0 0.0 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4179) Glycos_transf_2 PF00535.26 gi|21228211|ref|NP_634133.1| - 2.3e-15 56.8 0.1 2.4e-08 33.9 0.1 2.3 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21228211|ref|NP_634133.1| - 1e-05 25.6 0.0 0.00046 20.2 0.0 2.0 1 1 1 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|21228211|ref|NP_634133.1| - 0.01 16.4 0.0 0.019 15.5 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF354 PF04007.12 gi|21228212|ref|NP_634134.1| - 5.2e-22 78.4 0.1 6.4e-22 78.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|21228212|ref|NP_634134.1| - 2.9e-05 24.1 0.0 5.2e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|21228212|ref|NP_634134.1| - 0.00031 20.8 0.0 0.0005 20.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Epimerase_2 PF02350.19 gi|21228212|ref|NP_634134.1| - 0.012 14.5 0.0 0.02 13.8 0.0 1.3 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_1_2 PF13524.6 gi|21228212|ref|NP_634134.1| - 0.016 15.6 0.9 1.3 9.5 0.1 2.9 3 0 0 3 3 3 0 Glycosyl transferases group 1 Glutaredoxin PF00462.24 gi|21228212|ref|NP_634134.1| - 0.045 14.0 0.0 15 5.9 0.0 3.4 4 0 0 4 4 4 0 Glutaredoxin DUF1635 PF07795.11 gi|21228212|ref|NP_634134.1| - 0.14 12.0 0.3 0.21 11.4 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) Hexapep PF00132.24 gi|21228213|ref|NP_634135.1| - 6.9e-16 57.3 3.5 1.1e-08 34.5 0.4 4.2 4 0 0 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21228213|ref|NP_634135.1| - 3.6e-11 42.6 2.1 1.2e-08 34.6 0.4 2.5 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase FemAB PF02388.16 gi|21228214|ref|NP_634136.1| - 1.2e-12 47.5 0.4 9.2e-06 24.8 0.0 3.1 1 1 2 3 3 3 3 FemAB family Acetyltransf_6 PF13480.7 gi|21228214|ref|NP_634136.1| - 4.3e-09 36.7 0.0 7.4e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Halogen_Hydrol PF10112.9 gi|21228214|ref|NP_634136.1| - 0.16 12.0 0.1 0.24 11.4 0.1 1.3 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein GatB_N PF02934.15 gi|21228215|ref|NP_634137.1| - 0.021 14.2 0.2 1.4 8.2 0.1 2.1 2 0 0 2 2 2 0 GatB/GatE catalytic domain Prefoldin PF02996.17 gi|21228215|ref|NP_634137.1| - 0.095 12.6 0.9 0.16 11.9 0.2 1.6 2 0 0 2 2 2 0 Prefoldin subunit Cast PF10174.9 gi|21228215|ref|NP_634137.1| - 0.097 10.9 0.0 0.13 10.5 0.0 1.1 1 0 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone Polysacc_deac_1 PF01522.21 gi|21228215|ref|NP_634137.1| - 0.11 12.4 0.1 0.21 11.5 0.1 1.6 1 1 0 1 1 1 0 Polysaccharide deacetylase Exosortase_EpsH PF09721.10 gi|21228216|ref|NP_634138.1| - 2.6e-20 73.0 23.1 3.7e-20 72.5 23.1 1.1 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) Orai-1 PF07856.12 gi|21228216|ref|NP_634138.1| - 0.055 13.1 0.3 0.055 13.1 0.3 2.5 3 1 0 3 3 3 0 Mediator of CRAC channel activity ABC2_membrane_5 PF13346.6 gi|21228216|ref|NP_634138.1| - 4.8 6.7 32.8 0.12 11.9 13.1 2.7 2 1 0 2 2 2 0 ABC-2 family transporter protein Peptidase_M48 PF01435.18 gi|21228217|ref|NP_634139.1| - 2.7e-19 69.7 0.0 1.3e-18 67.5 0.0 2.1 2 1 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|21228217|ref|NP_634139.1| - 6.5e-06 25.5 0.1 2e-05 23.9 0.0 1.8 2 0 0 2 2 2 1 BlaR1 peptidase M56 DUF1616 PF07760.11 gi|21228219|ref|NP_634141.1| - 2e-73 247.4 0.0 2.8e-73 246.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) ThrE PF06738.12 gi|21228219|ref|NP_634141.1| - 0.043 13.2 1.5 0.074 12.4 1.5 1.4 1 0 0 1 1 1 0 Putative threonine/serine exporter MBG PF17883.1 gi|21228220|ref|NP_634142.1| - 0.043 14.4 0.1 0.043 14.4 0.1 2.2 2 1 0 2 2 2 0 MBG domain LptF_LptG PF03739.14 gi|21228220|ref|NP_634142.1| - 0.066 12.0 0.4 0.12 11.3 0.3 1.4 1 1 1 2 2 2 0 Lipopolysaccharide export system permease LptF/LptG Big_2 PF02368.18 gi|21228220|ref|NP_634142.1| - 9.4 6.2 14.6 4.7 7.2 5.8 2.3 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 2) SpaA PF17802.1 gi|21228222|ref|NP_634144.1| - 0.21 12.0 2.3 2.2 8.7 0.0 2.2 2 0 0 2 2 2 0 Prealbumin-like fold domain PASTA PF03793.19 gi|21228224|ref|NP_634146.1| - 2.2e-54 181.1 15.7 1.9e-14 53.2 0.5 4.3 4 0 0 4 4 4 4 PASTA domain potato_inhibit PF00280.18 gi|21228224|ref|NP_634146.1| - 0.019 15.7 0.1 45 4.8 0.0 4.0 4 0 0 4 4 4 0 Potato inhibitor I family Ribosomal_L3 PF00297.22 gi|21228226|ref|NP_634148.1| - 8.6e-87 291.5 0.3 3.1e-86 289.7 0.3 1.7 1 1 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.22 gi|21228227|ref|NP_634149.1| - 3.1e-50 170.6 0.2 3.5e-50 170.4 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.20 gi|21228228|ref|NP_634150.1| - 2.8e-14 53.2 1.0 3.3e-14 53.0 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L2_C PF03947.18 gi|21228229|ref|NP_634151.1| - 9.2e-43 145.5 0.6 1.5e-42 144.7 0.6 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|21228229|ref|NP_634151.1| - 7e-17 61.2 0.0 2.7e-16 59.3 0.0 2.0 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.21 gi|21228230|ref|NP_634152.1| - 1.5e-27 95.3 0.9 2.3e-27 94.7 0.9 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Citrate_synt PF00285.21 gi|21228230|ref|NP_634152.1| - 0.068 12.2 0.0 0.069 12.2 0.0 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain Ribosomal_L22 PF00237.19 gi|21228231|ref|NP_634153.1| - 1.9e-32 111.5 0.1 2.3e-32 111.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.20 gi|21228232|ref|NP_634154.1| - 1.5e-22 79.9 0.7 3e-22 78.9 0.3 1.8 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|21228232|ref|NP_634154.1| - 5.7e-15 54.9 0.0 1.7e-14 53.4 0.0 1.9 1 0 0 1 1 1 1 KH domain Mitofilin PF09731.9 gi|21228232|ref|NP_634154.1| - 0.025 13.5 6.7 0.035 13.0 6.7 1.2 1 0 0 1 1 1 0 Mitochondrial inner membrane protein KH_1 PF00013.29 gi|21228232|ref|NP_634154.1| - 0.086 12.7 3.4 0.14 12.0 0.1 2.9 4 0 0 4 4 4 0 KH domain Pox_Ag35 PF03286.14 gi|21228232|ref|NP_634154.1| - 7.9 6.2 8.1 13 5.5 8.1 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Ribosomal_L29 PF00831.23 gi|21228233|ref|NP_634155.1| - 8.8e-19 67.2 0.2 1.1e-18 67.0 0.2 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein Med9 PF07544.13 gi|21228233|ref|NP_634155.1| - 0.026 14.6 0.3 0.38 10.9 0.2 2.0 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 MerR-DNA-bind PF09278.11 gi|21228233|ref|NP_634155.1| - 0.058 13.9 2.0 4.3 7.9 0.0 2.2 2 0 0 2 2 2 0 MerR, DNA binding DUF3213 PF11491.8 gi|21228233|ref|NP_634155.1| - 0.1 12.8 0.4 0.16 12.1 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3213) UPF0086 PF01868.16 gi|21228234|ref|NP_634156.1| - 2.4e-23 81.9 0.0 2.8e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_S17 PF00366.20 gi|161485670|ref|NP_634157.2| - 2.6e-28 97.9 6.1 3.1e-28 97.7 6.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|161485670|ref|NP_634157.2| - 0.0039 17.5 0.1 0.012 16.0 0.0 1.8 2 0 0 2 2 2 1 Ribosomal_S17 N-terminal Ribosomal_L14 PF00238.19 gi|161485669|ref|NP_634158.2| - 5.9e-36 123.2 1.2 6.5e-36 123.1 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_L26 PF16906.5 gi|21228237|ref|NP_634159.1| - 2.7e-28 98.2 0.1 3.3e-28 98.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|21228237|ref|NP_634159.1| - 1.6e-05 24.7 0.2 3.3e-05 23.7 0.2 1.6 1 0 0 1 1 1 1 KOW motif DUF4150 PF13665.6 gi|21228237|ref|NP_634159.1| - 0.073 13.2 0.1 0.099 12.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4150) Ribosomal_S4e PF00900.20 gi|21228238|ref|NP_634160.1| - 7.9e-22 77.0 0.5 1.4e-21 76.1 0.5 1.4 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.12 gi|21228238|ref|NP_634160.1| - 3e-09 36.8 2.1 3e-09 36.8 2.1 1.5 2 0 0 2 2 2 1 RS4NT (NUC023) domain S4 PF01479.25 gi|21228238|ref|NP_634160.1| - 3e-05 23.6 1.5 5.7e-05 22.7 0.1 2.2 3 0 0 3 3 3 1 S4 domain KOW PF00467.29 gi|21228238|ref|NP_634160.1| - 0.00024 20.9 0.9 0.0005 19.9 0.1 2.0 2 0 0 2 2 2 1 KOW motif LYTB PF02401.18 gi|21228238|ref|NP_634160.1| - 0.035 13.4 0.1 0.06 12.6 0.1 1.3 1 0 0 1 1 1 0 LytB protein Ribosomal_L5_C PF00673.21 gi|21228239|ref|NP_634161.1| - 1.4e-24 86.1 0.0 2e-24 85.6 0.0 1.3 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|21228239|ref|NP_634161.1| - 2.4e-17 63.0 0.1 4.2e-17 62.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 gi|21228240|ref|NP_634162.1| - 2.8e-15 55.8 2.1 3.2e-15 55.6 2.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-P11 PF03854.14 gi|21228240|ref|NP_634162.1| - 0.00038 20.0 1.6 0.00047 19.7 1.6 1.1 1 0 0 1 1 1 1 P-11 zinc finger DUF4428 PF14471.6 gi|21228240|ref|NP_634162.1| - 0.00082 19.3 0.2 0.00093 19.1 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) zf-UBR PF02207.20 gi|21228240|ref|NP_634162.1| - 0.0083 16.3 0.4 0.0091 16.1 0.4 1.1 1 0 0 1 1 1 1 Putative zinc finger in N-recognin (UBR box) DUF1451 PF07295.11 gi|21228240|ref|NP_634162.1| - 0.021 14.9 0.3 0.023 14.7 0.3 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Rsm1 PF08600.10 gi|21228240|ref|NP_634162.1| - 1.3 9.3 3.9 12 6.1 0.2 2.0 1 1 1 2 2 2 0 Rsm1-like Ribosomal_S8 PF00410.19 gi|21228241|ref|NP_634163.1| - 5e-27 94.4 0.0 6e-27 94.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.23 gi|21228242|ref|NP_634164.1| - 9.2e-31 106.3 7.6 6.8e-17 61.9 0.2 2.0 2 0 0 2 2 2 2 Ribosomal protein L6 HSP20 PF00011.21 gi|21228242|ref|NP_634164.1| - 0.02 15.1 0.5 11 6.3 0.1 2.8 4 0 0 4 4 4 0 Hsp20/alpha crystallin family Ribosomal_L32e PF01655.18 gi|21228243|ref|NP_634165.1| - 3.9e-34 117.3 0.0 4.8e-34 117.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L19e PF01280.20 gi|21228244|ref|NP_634166.1| - 3.6e-58 195.7 6.6 4.1e-58 195.6 6.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Lant_dehydr_C PF14028.6 gi|21228244|ref|NP_634166.1| - 0.07 12.7 0.1 0.078 12.5 0.1 1.1 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term DUF1943 PF09172.11 gi|21228244|ref|NP_634166.1| - 0.074 12.3 0.0 0.074 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Ribosomal_L5e PF17144.4 gi|161485668|ref|NP_634167.2| - 1.6e-27 96.5 0.2 7.5e-18 65.1 0.1 2.3 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18p PF00861.22 gi|161485668|ref|NP_634167.2| - 0.00015 22.1 0.0 0.0002 21.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_S11 PF00411.19 gi|161485668|ref|NP_634167.2| - 0.057 13.8 0.0 0.094 13.1 0.0 1.4 1 1 0 1 1 1 0 Ribosomal protein S11 Ribosomal_S5 PF00333.20 gi|21228246|ref|NP_634168.1| - 3.3e-25 87.9 0.4 8.2e-25 86.6 0.4 1.7 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|21228246|ref|NP_634168.1| - 1.5e-22 78.9 0.4 2.6e-22 78.1 0.4 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.20 gi|21228247|ref|NP_634169.1| - 8.3e-15 54.4 0.2 1.5e-14 53.6 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e FeS PF04060.13 gi|21228247|ref|NP_634169.1| - 0.055 13.1 0.2 0.11 12.1 0.2 1.5 1 0 0 1 1 1 0 Putative Fe-S cluster Ribosomal_L27A PF00828.19 gi|21228248|ref|NP_634170.1| - 3.2e-24 86.0 0.6 4.3e-24 85.6 0.6 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 gi|21228248|ref|NP_634170.1| - 0.062 12.7 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e SecY PF00344.20 gi|21228249|ref|NP_634171.1| - 6.2e-67 226.0 23.6 7.3e-67 225.8 23.6 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|21228249|ref|NP_634171.1| - 1.2e-10 41.0 0.9 1.2e-10 41.0 0.9 2.5 2 1 1 3 3 3 1 Plug domain of Sec61p ADK PF00406.22 gi|21228250|ref|NP_634172.1| - 2.4e-61 206.3 0.0 2.9e-61 206.0 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 gi|21228250|ref|NP_634172.1| - 5.5e-29 101.3 0.0 8.5e-29 100.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain ADK_lid PF05191.14 gi|21228250|ref|NP_634172.1| - 9.9e-15 54.2 2.1 1.6e-14 53.6 2.1 1.3 1 0 0 1 1 1 1 Adenylate kinase, active site lid Hydin_ADK PF17213.3 gi|21228250|ref|NP_634172.1| - 2.5e-07 31.2 0.8 0.004 17.5 0.1 3.0 2 1 1 3 3 3 2 Hydin Adenylate kinase-like domain AAA_18 PF13238.6 gi|21228250|ref|NP_634172.1| - 3e-05 24.6 0.0 0.0001 22.9 0.0 1.9 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|21228250|ref|NP_634172.1| - 0.001 19.2 0.0 0.0043 17.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|21228250|ref|NP_634172.1| - 0.038 13.7 0.1 14 5.3 0.0 2.8 3 0 0 3 3 3 0 Thymidylate kinase AAA_22 PF13401.6 gi|21228250|ref|NP_634172.1| - 0.089 13.1 0.0 0.15 12.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|21228250|ref|NP_634172.1| - 0.095 13.1 0.0 0.24 11.8 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Cytidylate_kin PF02224.18 gi|21228250|ref|NP_634172.1| - 0.096 12.4 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Cytidylate kinase Mg_chelatase PF01078.21 gi|21228250|ref|NP_634172.1| - 0.1 12.0 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|21228250|ref|NP_634172.1| - 0.13 11.9 0.1 0.24 11.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain AIRC PF00731.20 gi|21228251|ref|NP_634173.1| - 3.3e-57 192.2 1.7 3.8e-57 192.0 1.7 1.0 1 0 0 1 1 1 1 AIR carboxylase LAGLIDADG_3 PF14528.6 gi|21228251|ref|NP_634173.1| - 0.12 12.7 0.0 0.23 11.8 0.0 1.5 1 0 0 1 1 1 0 LAGLIDADG-like domain ZnuA PF01297.17 gi|21228251|ref|NP_634173.1| - 0.17 11.2 0.3 0.37 10.2 0.0 1.6 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic MarR_2 PF12802.7 gi|21228252|ref|NP_634174.1| - 4.4e-07 29.7 0.0 5.8e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|21228252|ref|NP_634174.1| - 1.6e-06 28.0 0.1 3.1e-06 27.0 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.6 gi|21228252|ref|NP_634174.1| - 3.6e-06 26.9 0.2 4.7e-06 26.5 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.19 gi|21228252|ref|NP_634174.1| - 4.7e-06 26.4 0.1 1e-05 25.3 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|21228252|ref|NP_634174.1| - 1.2e-05 24.8 0.1 1.7e-05 24.2 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF505 PF04458.12 gi|21228252|ref|NP_634174.1| - 3.1e-05 22.6 0.8 3.4e-05 22.4 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF505) HxlR PF01638.17 gi|21228252|ref|NP_634174.1| - 3.9e-05 23.4 0.1 5.1e-05 23.0 0.1 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_36 PF13730.6 gi|21228252|ref|NP_634174.1| - 4.9e-05 23.2 0.0 0.0001 22.2 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|21228252|ref|NP_634174.1| - 0.0001 22.7 0.2 0.00018 21.9 0.1 1.5 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|21228252|ref|NP_634174.1| - 0.00014 21.7 0.1 0.00019 21.3 0.1 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_34 PF13601.6 gi|21228252|ref|NP_634174.1| - 0.00028 21.0 0.2 0.00038 20.6 0.2 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|21228252|ref|NP_634174.1| - 0.00045 20.1 0.2 0.00071 19.5 0.2 1.3 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.7 gi|21228252|ref|NP_634174.1| - 0.00056 19.9 0.1 0.00072 19.6 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain PadR PF03551.14 gi|21228252|ref|NP_634174.1| - 0.00073 19.5 0.1 0.00091 19.1 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF2250 PF10007.9 gi|21228252|ref|NP_634174.1| - 0.00081 19.5 0.2 0.0045 17.1 0.1 1.9 1 1 1 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) Phage_rep_org_N PF09681.10 gi|21228252|ref|NP_634174.1| - 0.0011 18.9 0.1 0.0014 18.6 0.1 1.3 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) Rrf2 PF02082.20 gi|21228252|ref|NP_634174.1| - 0.0012 19.2 0.1 0.0019 18.5 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator Replic_Relax PF13814.6 gi|21228252|ref|NP_634174.1| - 0.0013 18.8 0.0 0.0015 18.7 0.0 1.1 1 0 0 1 1 1 1 Replication-relaxation TFIIE_alpha PF02002.17 gi|21228252|ref|NP_634174.1| - 0.0014 18.4 0.7 0.0017 18.2 0.7 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit DUF4364 PF14277.6 gi|21228252|ref|NP_634174.1| - 0.0014 18.4 0.1 0.0017 18.1 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Rio2_N PF09202.11 gi|21228252|ref|NP_634174.1| - 0.003 17.7 0.0 0.0042 17.3 0.0 1.2 1 0 0 1 1 1 1 Rio2, N-terminal DUF1495 PF07381.11 gi|21228252|ref|NP_634174.1| - 0.012 15.4 0.2 0.28 11.0 0.2 2.0 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) B-block_TFIIIC PF04182.12 gi|21228252|ref|NP_634174.1| - 0.017 15.2 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC FeoC PF09012.10 gi|21228252|ref|NP_634174.1| - 0.022 14.8 0.1 0.032 14.3 0.1 1.2 1 0 0 1 1 1 0 FeoC like transcriptional regulator Ribosomal_S19e PF01090.19 gi|21228252|ref|NP_634174.1| - 0.022 14.4 0.1 0.025 14.3 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S19e HTH_5 PF01022.20 gi|21228252|ref|NP_634174.1| - 0.023 14.6 0.1 0.038 13.9 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_29 PF13551.6 gi|21228252|ref|NP_634174.1| - 0.027 14.5 0.0 0.032 14.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix GntR PF00392.21 gi|21228252|ref|NP_634174.1| - 0.027 14.1 0.1 0.046 13.4 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_28 PF13518.6 gi|21228252|ref|NP_634174.1| - 0.028 14.6 0.0 0.039 14.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3116 PF11313.8 gi|21228252|ref|NP_634174.1| - 0.03 14.2 0.2 0.032 14.1 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3116) LexA_DNA_bind PF01726.16 gi|21228252|ref|NP_634174.1| - 0.033 13.9 0.0 0.077 12.8 0.0 1.7 2 0 0 2 2 1 0 LexA DNA binding domain DprA_WH PF17782.1 gi|21228252|ref|NP_634174.1| - 0.04 14.0 0.0 0.07 13.3 0.0 1.4 1 0 0 1 1 1 0 DprA winged helix domain HTH_IclR PF09339.10 gi|21228252|ref|NP_634174.1| - 0.041 13.7 0.1 0.057 13.2 0.1 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain RPA_C PF08784.11 gi|21228252|ref|NP_634174.1| - 0.048 14.3 0.0 0.072 13.8 0.0 1.2 1 0 0 1 1 1 0 Replication protein A C terminal AbiEi_4 PF13338.6 gi|21228252|ref|NP_634174.1| - 0.1 12.8 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin Hexapep PF00132.24 gi|21228253|ref|NP_634175.1| - 4.2e-13 48.4 17.8 3.1e-06 26.7 1.6 4.9 5 1 1 6 6 6 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21228253|ref|NP_634175.1| - 2.6e-05 23.9 19.7 0.018 14.8 1.5 4.9 4 1 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|21228253|ref|NP_634175.1| - 0.00018 20.6 4.0 0.0015 17.6 4.0 2.0 1 1 0 1 1 1 1 L-fucokinase EMC3_TMCO1 PF01956.16 gi|21228254|ref|NP_634176.1| - 1.9e-49 167.6 9.1 2.5e-49 167.3 9.1 1.1 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like HPIH PF13323.6 gi|21228254|ref|NP_634176.1| - 0.039 13.8 0.6 0.071 13.0 0.3 1.6 1 1 1 2 2 2 0 N-terminal domain with HPIH motif Cytidylate_kin2 PF13189.6 gi|21228255|ref|NP_634177.1| - 8.1e-20 71.7 1.9 6.7e-19 68.7 1.9 1.9 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|21228255|ref|NP_634177.1| - 4.6e-11 43.4 0.1 6e-11 43.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|21228255|ref|NP_634177.1| - 2.2e-09 37.9 0.1 3.9e-09 37.1 0.1 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|21228255|ref|NP_634177.1| - 2e-06 27.7 1.5 0.011 15.4 0.0 2.2 1 1 1 2 2 2 2 Cytidylate kinase SKI PF01202.22 gi|21228255|ref|NP_634177.1| - 0.00013 22.2 0.8 0.00063 19.9 0.8 1.9 1 1 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 gi|21228255|ref|NP_634177.1| - 0.00061 20.0 0.1 0.0029 17.8 0.1 2.0 1 1 0 1 1 1 1 AAA domain ADK PF00406.22 gi|21228255|ref|NP_634177.1| - 0.0014 18.8 0.1 0.0032 17.6 0.0 1.6 2 0 0 2 2 2 1 Adenylate kinase TruB_C_2 PF16198.5 gi|21228256|ref|NP_634178.1| - 7.4e-28 96.5 0.0 1.3e-27 95.7 0.0 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain TruB_N PF01509.18 gi|21228256|ref|NP_634178.1| - 1.5e-21 77.3 1.7 2.7e-17 63.5 1.6 3.5 2 1 0 2 2 2 1 TruB family pseudouridylate synthase (N terminal domain) DKCLD PF08068.12 gi|21228256|ref|NP_634178.1| - 1.3e-18 66.8 0.1 2.5e-18 65.9 0.1 1.5 1 0 0 1 1 1 1 DKCLD (NUC011) domain PUA PF01472.20 gi|21228256|ref|NP_634178.1| - 2.2e-16 59.6 0.0 4e-16 58.8 0.0 1.4 1 0 0 1 1 1 1 PUA domain Ribosomal_S13 PF00416.22 gi|21228257|ref|NP_634179.1| - 1.9e-40 138.2 0.0 2.3e-40 137.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 S4 PF01479.25 gi|21228258|ref|NP_634180.1| - 1.3e-14 53.6 0.3 9.1e-14 50.9 0.0 2.3 2 0 0 2 2 2 1 S4 domain Ribosomal_S11 PF00411.19 gi|21228259|ref|NP_634181.1| - 1.8e-46 157.0 3.4 2.6e-46 156.6 3.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S11 Pilus_CpaD PF09476.10 gi|21228259|ref|NP_634181.1| - 0.012 15.3 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) CBM_25 PF03423.13 gi|21228259|ref|NP_634181.1| - 0.026 14.8 0.1 0.062 13.6 0.0 1.6 2 0 0 2 2 2 0 Carbohydrate binding domain (family 25) RNA_pol_A_bac PF01000.26 gi|21228260|ref|NP_634182.1| - 6.7e-28 97.3 0.0 2.8e-27 95.3 0.0 1.9 2 1 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|21228260|ref|NP_634182.1| - 3.8e-13 48.7 0.0 5.4e-13 48.2 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_7 PF12838.7 gi|21228260|ref|NP_634182.1| - 1.4e-05 25.6 33.1 0.00012 22.6 11.9 2.8 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21228260|ref|NP_634182.1| - 7.2e-05 22.4 21.4 0.0037 17.0 1.5 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21228260|ref|NP_634182.1| - 0.00013 22.1 11.5 0.00013 22.1 11.5 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21228260|ref|NP_634182.1| - 0.0004 20.8 13.4 0.12 12.9 6.8 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21228260|ref|NP_634182.1| - 0.0018 19.2 15.3 0.039 14.9 2.0 2.9 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|21228260|ref|NP_634182.1| - 0.003 17.5 5.3 0.003 17.5 5.3 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain DUF4879 PF16219.5 gi|21228260|ref|NP_634182.1| - 0.03 14.5 0.3 0.53 10.5 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4879) Fer4_10 PF13237.6 gi|21228260|ref|NP_634182.1| - 0.25 11.5 22.0 0.048 13.8 13.8 2.9 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21228260|ref|NP_634182.1| - 0.56 10.8 20.3 0.32 11.6 3.9 3.1 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21228260|ref|NP_634182.1| - 2.6 8.2 21.6 0.042 14.0 13.4 2.2 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21228260|ref|NP_634182.1| - 5.3 7.3 23.3 1.3 9.2 4.0 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Big_3_5 PF16640.5 gi|21228261|ref|NP_634183.1| - 1.4e-16 60.4 0.0 1.4e-16 60.4 0.0 4.5 4 1 1 5 5 4 1 Bacterial Ig-like domain (group 3) Lactonase PF10282.9 gi|21228261|ref|NP_634183.1| - 2.6e-15 56.6 6.4 2.9e-09 36.6 0.2 3.3 1 1 1 3 3 3 3 Lactonase, 7-bladed beta-propeller NHL PF01436.21 gi|21228261|ref|NP_634183.1| - 9.2e-09 34.9 11.2 0.3 11.2 1.9 5.4 5 0 0 5 5 5 3 NHL repeat Cytochrom_D1 PF02239.16 gi|21228261|ref|NP_634183.1| - 3.8e-08 32.3 3.7 9.9e-05 21.0 0.3 3.1 2 1 1 3 3 3 3 Cytochrome D1 heme domain SGL PF08450.12 gi|21228261|ref|NP_634183.1| - 4.1e-07 29.8 10.8 0.018 14.6 2.4 3.7 1 1 3 4 4 4 3 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 gi|21228261|ref|NP_634183.1| - 2.5e-06 27.6 14.9 0.22 11.8 0.2 6.4 3 2 3 6 6 6 3 Arylesterase Str_synth PF03088.16 gi|21228261|ref|NP_634183.1| - 0.00096 19.2 0.9 2.5 8.3 0.1 5.2 5 1 1 7 7 7 1 Strictosidine synthase SBP56 PF05694.11 gi|21228261|ref|NP_634183.1| - 0.0014 17.5 0.2 5.1 5.8 0.0 4.4 3 1 3 6 6 6 1 56kDa selenium binding protein (SBP56) PD40 PF07676.12 gi|21228261|ref|NP_634183.1| - 0.0016 18.3 0.1 14 5.8 0.0 4.6 4 0 0 4 4 4 0 WD40-like Beta Propeller Repeat ThaI PF15514.6 gi|21228261|ref|NP_634183.1| - 0.0035 17.0 0.6 0.97 9.1 0.1 2.7 2 1 0 2 2 2 1 Restriction endonuclease ThaI FixG_C PF11614.8 gi|21228261|ref|NP_634183.1| - 0.0081 16.4 1.4 0.046 13.9 0.1 2.7 2 2 1 3 3 3 1 IG-like fold at C-terminal of FixG, putative oxidoreductase GCV_T PF01571.21 gi|21228261|ref|NP_634183.1| - 0.014 14.7 0.0 0.48 9.8 0.0 2.2 2 0 0 2 2 2 0 Aminomethyltransferase folate-binding domain SH3_6 PF12913.7 gi|21228261|ref|NP_634183.1| - 0.058 13.0 0.0 15 5.2 0.0 3.3 3 0 0 3 3 3 0 SH3 domain (SH3b1 type) Glyco_hydro_42C PF08533.10 gi|21228261|ref|NP_634183.1| - 0.067 12.9 0.5 4.3 7.1 0.0 2.9 2 1 0 2 2 2 0 Beta-galactosidase C-terminal domain Svf1 PF08622.10 gi|21228261|ref|NP_634183.1| - 0.074 13.1 1.8 1.4 8.9 0.2 2.8 2 1 1 3 3 3 0 Svf1-like N-terminal lipocalin domain PCC_BT PF18140.1 gi|21228261|ref|NP_634183.1| - 1.9 8.8 7.6 3.2 8.1 2.7 2.7 2 1 0 2 2 2 0 Propionyl-coenzyme A carboxylase BT domain PQQ PF01011.21 gi|21228261|ref|NP_634183.1| - 2.3 8.3 8.1 11 6.2 0.1 4.2 4 0 0 4 4 4 0 PQQ enzyme repeat Hexapep PF00132.24 gi|21228263|ref|NP_634185.1| - 7.4e-20 69.9 17.7 4e-09 35.8 2.2 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21228263|ref|NP_634185.1| - 1.1e-09 37.8 13.5 1.2e-06 28.2 2.2 3.1 2 1 1 3 3 3 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|21228263|ref|NP_634185.1| - 0.024 13.6 0.5 0.06 12.3 0.5 1.7 1 1 1 2 2 2 0 L-fucokinase DUF4954 PF16314.5 gi|21228263|ref|NP_634185.1| - 5.2 5.1 7.9 1.2 7.2 4.4 1.6 1 1 0 2 2 2 0 Domain of unknown function (DUF4954) Na_H_Exchanger PF00999.21 gi|21228264|ref|NP_634186.1| - 0.00085 18.2 0.2 0.00085 18.2 0.2 1.3 2 0 0 2 2 2 1 Sodium/hydrogen exchanger family DUF1422 PF07226.11 gi|21228264|ref|NP_634186.1| - 0.015 15.3 1.2 1.7 8.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1422) Orf78 PF06024.12 gi|21228264|ref|NP_634186.1| - 0.043 14.1 2.1 3.8 7.9 0.3 2.2 1 1 1 2 2 2 0 Orf78 (ac78) cobW PF02492.19 gi|21228265|ref|NP_634187.1| - 1.7e-25 89.7 1.1 2e-25 89.4 1.1 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|21228265|ref|NP_634187.1| - 5.1e-06 25.7 1.7 0.028 13.4 0.4 2.1 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|21228265|ref|NP_634187.1| - 0.0015 18.9 0.0 0.002 18.5 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain MobB PF03205.14 gi|21228265|ref|NP_634187.1| - 0.0021 18.0 0.0 0.0054 16.6 0.0 1.7 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 gi|21228265|ref|NP_634187.1| - 0.0029 17.6 0.0 0.0033 17.4 0.0 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_18 PF13238.6 gi|21228265|ref|NP_634187.1| - 0.007 16.9 0.1 0.013 16.0 0.1 1.5 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 gi|21228265|ref|NP_634187.1| - 0.0076 16.1 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein NTPase_1 PF03266.15 gi|21228265|ref|NP_634187.1| - 0.0099 15.8 0.2 0.06 13.3 0.0 2.1 1 1 0 2 2 2 1 NTPase AAA_17 PF13207.6 gi|21228265|ref|NP_634187.1| - 0.012 16.0 0.1 0.072 13.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|21228265|ref|NP_634187.1| - 0.012 15.2 0.0 0.019 14.6 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NB-ARC PF00931.22 gi|21228265|ref|NP_634187.1| - 0.013 14.8 0.1 0.02 14.1 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain TsaE PF02367.17 gi|21228265|ref|NP_634187.1| - 0.024 14.6 0.0 0.043 13.8 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 gi|21228265|ref|NP_634187.1| - 0.028 14.1 0.0 0.039 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|21228265|ref|NP_634187.1| - 0.029 14.6 0.0 0.077 13.3 0.0 1.6 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|21228265|ref|NP_634187.1| - 0.037 13.1 0.0 0.055 12.5 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein Zeta_toxin PF06414.12 gi|21228265|ref|NP_634187.1| - 0.037 13.3 0.0 0.051 12.8 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 gi|21228265|ref|NP_634187.1| - 0.037 14.4 0.0 0.05 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|21228265|ref|NP_634187.1| - 0.059 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 gi|21228265|ref|NP_634187.1| - 0.059 13.4 0.0 0.097 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|21228265|ref|NP_634187.1| - 0.061 13.5 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Pox_A32 PF04665.12 gi|21228265|ref|NP_634187.1| - 0.061 12.8 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein KAP_NTPase PF07693.14 gi|21228265|ref|NP_634187.1| - 0.069 12.4 0.0 0.069 12.4 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain GTP_EFTU PF00009.27 gi|21228265|ref|NP_634187.1| - 0.085 12.4 0.2 0.52 9.8 0.0 2.0 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain HupF_HypC PF01455.18 gi|21228266|ref|NP_634188.1| - 3.1e-20 72.1 0.9 3.8e-20 71.8 0.9 1.1 1 0 0 1 1 1 1 HupF/HypC family HTH_23 PF13384.6 gi|21228267|ref|NP_634189.1| - 8.2e-14 50.9 0.0 1.6e-12 46.8 0.0 2.4 2 1 0 2 2 2 1 Homeodomain-like domain HTH_33 PF13592.6 gi|21228267|ref|NP_634189.1| - 1.7e-12 46.8 0.3 5.7e-10 38.7 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn helix HTH_29 PF13551.6 gi|21228267|ref|NP_634189.1| - 2.3e-11 43.6 0.1 7.9e-11 41.8 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 gi|21228267|ref|NP_634189.1| - 3.7e-11 43.0 0.1 3e-10 40.1 0.0 2.3 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_32 PF13565.6 gi|21228267|ref|NP_634189.1| - 6.4e-10 39.5 0.1 5e-09 36.7 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain Terminase_5 PF06056.12 gi|21228267|ref|NP_634189.1| - 1.1e-05 25.2 0.0 2.6e-05 24.0 0.0 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) LZ_Tnp_IS481 PF13011.6 gi|21228267|ref|NP_634189.1| - 0.00063 20.2 0.1 0.0039 17.7 0.0 2.0 2 0 0 2 2 2 1 leucine-zipper of insertion element IS481 HTH_30 PF13556.6 gi|21228267|ref|NP_634189.1| - 0.00093 19.0 0.0 0.0018 18.0 0.0 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_38 PF13936.6 gi|21228267|ref|NP_634189.1| - 0.001 18.8 0.0 0.0027 17.4 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Tnp_4 PF13613.6 gi|21228267|ref|NP_634189.1| - 0.0011 18.7 0.0 0.0026 17.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix of DDE superfamily endonuclease HTH_11 PF08279.12 gi|21228267|ref|NP_634189.1| - 0.0011 18.9 0.0 0.0028 17.5 0.0 1.8 1 0 0 1 1 1 1 HTH domain HTH_40 PF14493.6 gi|21228267|ref|NP_634189.1| - 0.0015 19.0 0.0 0.0034 17.8 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_IS630 PF01710.16 gi|21228267|ref|NP_634189.1| - 0.0038 17.3 0.1 0.0096 16.0 0.0 1.7 2 0 0 2 2 2 1 Transposase Mga PF05043.13 gi|21228267|ref|NP_634189.1| - 0.0038 17.8 0.1 2 9.0 0.0 2.4 3 0 0 3 3 2 1 Mga helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|21228267|ref|NP_634189.1| - 0.0046 16.3 0.0 0.03 13.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_Tnp_1 PF01527.20 gi|21228267|ref|NP_634189.1| - 0.0052 17.1 0.7 0.009 16.3 0.1 1.8 2 0 0 2 2 1 1 Transposase HTH_Tnp_1_2 PF13022.6 gi|21228267|ref|NP_634189.1| - 0.0054 16.9 0.1 0.055 13.6 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix of insertion element transposase HTH_10 PF04967.12 gi|21228267|ref|NP_634189.1| - 0.0094 15.7 0.1 6.4 6.7 0.1 3.0 3 0 0 3 3 3 1 HTH DNA binding domain Sigma70_r4_2 PF08281.12 gi|21228267|ref|NP_634189.1| - 0.013 15.2 0.0 0.03 14.0 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 SpoIIID PF12116.8 gi|21228267|ref|NP_634189.1| - 0.019 15.0 0.1 1.1 9.4 0.0 2.3 2 0 0 2 2 2 0 Stage III sporulation protein D HTH_24 PF13412.6 gi|21228267|ref|NP_634189.1| - 0.032 13.8 0.0 0.43 10.2 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF1804 PF08822.11 gi|21228267|ref|NP_634189.1| - 0.037 14.0 0.0 0.064 13.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) HTH_7 PF02796.15 gi|21228267|ref|NP_634189.1| - 0.038 14.1 0.0 0.16 12.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase DUF2089 PF09862.9 gi|21228267|ref|NP_634189.1| - 0.05 13.6 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) GntR PF00392.21 gi|21228267|ref|NP_634189.1| - 0.062 13.0 0.0 0.35 10.6 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family bacHORMA_2 PF18173.1 gi|21228267|ref|NP_634189.1| - 0.076 12.9 0.0 0.31 10.9 0.0 2.0 1 1 0 1 1 1 0 Bacterial HORMA domain 2 HTH_3 PF01381.22 gi|21228267|ref|NP_634189.1| - 0.089 12.9 0.0 0.32 11.1 0.0 2.0 2 0 0 2 2 1 0 Helix-turn-helix HTH_IclR PF09339.10 gi|21228267|ref|NP_634189.1| - 0.093 12.5 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain DDE_3 PF13358.6 gi|21228268|ref|NP_634190.1| - 3.5e-07 30.1 0.0 4.5e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 DDE superfamily endonuclease MULE PF10551.9 gi|21228269|ref|NP_634191.1| - 0.00035 20.9 0.0 0.00085 19.7 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|21228269|ref|NP_634191.1| - 0.00051 19.6 0.2 0.0045 16.5 0.2 2.0 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.18 gi|21228269|ref|NP_634191.1| - 0.024 14.4 1.2 0.041 13.6 0.7 1.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Zn-ribbon_8 PF09723.10 gi|21228269|ref|NP_634191.1| - 0.23 11.6 0.8 0.91 9.7 0.2 2.2 2 0 0 2 2 2 0 Zinc ribbon domain DDE_3 PF13358.6 gi|21228270|ref|NP_634192.1| - 3.2e-10 39.9 0.4 3.9e-10 39.7 0.4 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease Oxidored_q6 PF01058.22 gi|21228271|ref|NP_634193.1| - 5e-33 113.7 1.9 1.1e-32 112.6 0.1 2.1 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.6 gi|21228271|ref|NP_634193.1| - 2.7e-29 101.3 5.2 4.4e-28 97.5 2.8 2.6 2 0 0 2 2 2 1 NiFe/NiFeSe hydrogenase small subunit C-terminal TAT_signal PF10518.9 gi|21228271|ref|NP_634193.1| - 0.0013 18.5 0.3 0.0013 18.5 0.3 2.9 3 0 0 3 3 3 1 TAT (twin-arginine translocation) pathway signal sequence NiFeSe_Hases PF00374.19 gi|21228272|ref|NP_634194.1| - 3.8e-83 280.1 0.0 2.3e-53 181.8 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase NLRC4_HD PF17889.1 gi|21228272|ref|NP_634194.1| - 0.0075 16.6 0.0 0.015 15.6 0.0 1.4 1 0 0 1 1 1 1 NLRC4 helical domain DUF4405 PF14358.6 gi|21228273|ref|NP_634195.1| - 0.00061 20.3 21.0 0.03 14.9 8.7 2.8 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) Ni_hydr_CYTB PF01292.20 gi|21228273|ref|NP_634195.1| - 0.0061 16.2 22.4 0.073 12.7 22.4 2.1 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 PepSY_TM PF03929.16 gi|21228273|ref|NP_634195.1| - 1.2 8.7 7.3 1.6 8.4 0.2 2.4 1 1 1 2 2 2 0 PepSY-associated TM region HycI PF01750.18 gi|21228274|ref|NP_634196.1| - 1.8e-15 56.9 0.9 2e-15 56.7 0.9 1.0 1 0 0 1 1 1 1 Hydrogenase maturation protease PG_binding_1 PF01471.18 gi|21228276|ref|NP_634198.1| - 5e-12 45.8 0.0 7.9e-12 45.2 0.0 1.3 1 0 0 1 1 1 1 Putative peptidoglycan binding domain NiFe_hyd_SSU_C PF14720.6 gi|21228277|ref|NP_634199.1| - 6e-29 100.2 4.3 1.2e-28 99.3 4.3 1.5 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal Oxidored_q6 PF01058.22 gi|21228277|ref|NP_634199.1| - 4.6e-24 84.7 0.0 6.8e-24 84.2 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit TAT_signal PF10518.9 gi|21228277|ref|NP_634199.1| - 0.04 13.8 0.2 0.04 13.8 0.2 2.4 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence NiFeSe_Hases PF00374.19 gi|21228278|ref|NP_634200.1| - 1e-82 278.7 0.0 6.5e-55 187.0 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase Ni_hydr_CYTB PF01292.20 gi|21228279|ref|NP_634201.1| - 4.1e-05 23.2 20.6 0.00024 20.8 20.6 1.9 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 gi|21228279|ref|NP_634201.1| - 0.00081 19.9 24.8 0.068 13.7 11.2 2.7 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) PsbN PF02468.15 gi|21228279|ref|NP_634201.1| - 0.003 17.4 2.1 0.095 12.6 0.1 2.5 2 0 0 2 2 2 2 Photosystem II reaction centre N protein (psbN) HATPase_c PF02518.26 gi|21228280|ref|NP_634202.1| - 1.1e-30 106.4 0.0 2.4e-30 105.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|21228280|ref|NP_634202.1| - 1.2e-27 96.2 2.1 1.3e-11 44.7 0.1 3.7 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 gi|21228280|ref|NP_634202.1| - 8.8e-25 86.9 0.0 7.8e-12 45.2 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.10 gi|21228280|ref|NP_634202.1| - 3.8e-22 78.6 0.0 6.3e-10 39.3 0.0 3.9 4 0 0 4 4 4 2 PAS fold HisKA PF00512.25 gi|21228280|ref|NP_634202.1| - 3.2e-18 65.5 0.0 9e-18 64.1 0.0 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 gi|21228280|ref|NP_634202.1| - 6.4e-15 54.8 0.0 3.2e-06 27.0 0.0 3.5 3 0 0 3 3 3 3 PAS domain MEDS PF14417.6 gi|21228280|ref|NP_634202.1| - 7.5e-06 25.9 0.0 1.7e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HATPase_c_3 PF13589.6 gi|21228280|ref|NP_634202.1| - 3e-05 23.9 0.0 6.7e-05 22.7 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|21228280|ref|NP_634202.1| - 9.8e-05 22.2 0.1 0.00071 19.4 0.0 2.5 2 0 0 2 2 2 1 GHKL domain PAS_7 PF12860.7 gi|21228280|ref|NP_634202.1| - 0.00031 20.9 0.1 6.3 7.0 0.0 4.1 3 1 0 3 3 3 1 PAS fold PAS_3 PF08447.12 gi|21228280|ref|NP_634202.1| - 0.0013 19.0 0.0 0.14 12.4 0.0 2.9 2 0 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 gi|21228280|ref|NP_634202.1| - 0.026 14.5 0.0 0.055 13.4 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain NitrOD2 PF18550.1 gi|21228280|ref|NP_634202.1| - 0.094 12.9 0.1 0.52 10.5 0.0 2.1 2 0 0 2 2 2 0 Nitrososphaera output domain 2 CGI-121 PF08617.10 gi|21228281|ref|NP_634203.1| - 2.6e-08 34.2 0.0 3e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 GATase PF00117.28 gi|21228282|ref|NP_634204.1| - 9.5e-16 58.1 0.0 1.3e-15 57.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|21228282|ref|NP_634204.1| - 9.6e-05 22.2 0.0 0.0032 17.3 0.0 2.1 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.14 gi|21228282|ref|NP_634204.1| - 0.0027 17.3 0.0 0.0044 16.6 0.0 1.5 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|21228282|ref|NP_634204.1| - 0.033 14.0 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family FBPase_glpX PF03320.13 gi|21228283|ref|NP_634205.1| - 6.1e-117 389.9 5.0 7.1e-117 389.7 5.0 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Oxidored_nitro PF00148.19 gi|21228283|ref|NP_634205.1| - 0.033 12.9 0.2 0.054 12.2 0.2 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Radical_SAM PF04055.21 gi|21228284|ref|NP_634206.1| - 2.5e-22 80.0 0.1 2.1e-21 77.0 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|21228284|ref|NP_634206.1| - 2.2e-17 62.9 0.1 5.1e-17 61.7 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|21228284|ref|NP_634206.1| - 6.9e-06 26.0 0.0 1.4e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 TRAM domain M20_dimer PF07687.14 gi|21228284|ref|NP_634206.1| - 0.069 13.1 0.0 0.29 11.1 0.0 2.0 2 0 0 2 2 2 0 Peptidase dimerisation domain TBP PF00352.21 gi|21228286|ref|NP_634208.1| - 4.2e-53 177.2 0.3 2.4e-26 91.5 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|21228286|ref|NP_634208.1| - 1.3e-06 28.4 0.0 0.032 14.3 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) Enkurin PF13864.6 gi|21228287|ref|NP_634209.1| - 0.2 12.1 0.5 0.5 10.8 0.5 1.7 1 0 0 1 1 1 0 Calmodulin-binding OMP_b-brl PF13505.6 gi|21228287|ref|NP_634209.1| - 0.24 11.5 6.1 0.84 9.7 6.1 1.9 1 0 0 1 1 1 0 Outer membrane protein beta-barrel domain DUF5305 PF17231.2 gi|21228290|ref|NP_634212.1| - 0.045 13.2 0.2 0.42 10.0 0.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5305) Rubrerythrin PF02915.17 gi|21228291|ref|NP_634213.1| - 6.8e-23 81.6 4.1 1.2e-22 80.8 4.1 1.4 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|21228291|ref|NP_634213.1| - 0.0052 16.7 2.1 0.0068 16.4 2.1 1.3 1 1 0 1 1 1 1 Ferritin-like domain DZR PF12773.7 gi|21228291|ref|NP_634213.1| - 0.0091 16.0 0.5 0.014 15.4 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon NRDD PF13597.6 gi|21228291|ref|NP_634213.1| - 0.023 13.5 2.0 0.036 12.8 0.4 1.7 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase zf-C3HC4_3 PF13920.6 gi|21228291|ref|NP_634213.1| - 0.13 12.2 0.3 0.19 11.6 0.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RRN7 PF11781.8 gi|21228291|ref|NP_634213.1| - 0.23 11.2 2.9 1.5 8.6 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zinc_ribbon_2 PF13240.6 gi|21228291|ref|NP_634213.1| - 0.23 11.2 1.7 0.55 10.0 1.7 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Rubredoxin PF00301.20 gi|21228291|ref|NP_634213.1| - 1.1 9.4 5.2 1.7 8.7 0.6 2.4 1 1 1 2 2 2 0 Rubredoxin CPBP PF02517.16 gi|21228292|ref|NP_634214.1| - 2.8e-14 53.3 11.3 2.8e-14 53.3 11.3 2.1 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease HNH PF01844.23 gi|21228293|ref|NP_634215.1| - 1.1e-05 25.5 2.1 2e-05 24.6 2.1 1.5 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 gi|21228293|ref|NP_634215.1| - 2.2e-05 24.2 2.2 3.8e-05 23.5 2.2 1.4 1 0 0 1 1 1 1 HNH endonuclease Endonuclease_7 PF02945.15 gi|21228293|ref|NP_634215.1| - 0.00019 21.3 0.6 0.00025 20.9 0.6 1.3 1 0 0 1 1 1 1 Recombination endonuclease VII DDE_Tnp_1_6 PF13751.6 gi|21228294|ref|NP_634216.1| - 4.9e-29 101.1 1.8 3e-28 98.6 1.4 2.3 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 gi|21228294|ref|NP_634216.1| - 2.9e-19 69.6 1.9 9.4e-19 67.9 1.9 1.9 1 1 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.11 gi|21228294|ref|NP_634216.1| - 3e-16 59.2 0.0 1.1e-15 57.3 0.0 2.0 2 0 0 2 2 2 1 Transposase domain (DUF772) DDE_Tnp_1_2 PF13586.6 gi|21228294|ref|NP_634216.1| - 0.014 15.8 0.0 1.6 9.1 0.0 2.9 2 0 0 2 2 2 0 Transposase DDE domain RE_XamI PF09572.10 gi|21228294|ref|NP_634216.1| - 0.044 13.4 0.1 0.14 11.8 0.1 1.8 1 1 0 1 1 1 0 XamI restriction endonuclease Metallophos PF00149.28 gi|21228295|ref|NP_634217.1| - 1.2e-12 48.7 0.1 2.4e-12 47.8 0.1 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|21228295|ref|NP_634217.1| - 7.2e-10 39.3 0.0 2e-09 37.9 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain FERM_N PF09379.10 gi|21228295|ref|NP_634217.1| - 0.085 12.8 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 FERM N-terminal domain SMC_N PF02463.19 gi|21228296|ref|NP_634218.1| - 1.3e-14 54.2 22.8 8.2e-14 51.6 22.8 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|21228296|ref|NP_634218.1| - 5.3e-09 36.3 5.7 5.7e-05 23.1 0.3 3.4 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21228296|ref|NP_634218.1| - 9.6e-05 22.1 0.0 0.00019 21.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 gi|21228296|ref|NP_634218.1| - 0.011 16.0 0.0 0.027 14.7 0.0 1.7 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 gi|21228296|ref|NP_634218.1| - 0.016 15.7 130.9 1.8e+04 -49.1 130.8 7.2 1 1 0 1 1 0 0 AAA domain PCNP PF15473.6 gi|21228296|ref|NP_634218.1| - 0.044 14.5 0.1 0.044 14.5 0.1 2.9 4 0 0 4 4 3 0 PEST, proteolytic signal-containing nuclear protein family RsgA_GTPase PF03193.16 gi|21228296|ref|NP_634218.1| - 0.076 12.9 0.0 0.35 10.8 0.0 2.2 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 gi|21228296|ref|NP_634218.1| - 0.091 13.3 0.0 0.091 13.3 0.0 5.3 4 2 0 5 5 4 0 ABC transporter AAA_16 PF13191.6 gi|21228296|ref|NP_634218.1| - 0.59 10.5 0.0 0.59 10.5 0.0 4.2 2 1 1 3 3 2 0 AAA ATPase domain MCD_N PF17408.2 gi|21228296|ref|NP_634218.1| - 1.3 9.2 4.9 2.6 8.2 1.5 3.5 2 0 0 2 2 2 0 Malonyl-CoA decarboxylase N-terminal domain DASH_Dam1 PF08653.10 gi|21228296|ref|NP_634218.1| - 4.7 7.1 10.1 9.2 6.2 0.0 5.2 5 0 0 5 5 5 0 DASH complex subunit Dam1 Bac_luciferase PF00296.20 gi|21228297|ref|NP_634219.1| - 2.5e-58 198.0 0.0 2.9e-58 197.8 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase FAM193_C PF15914.5 gi|21228297|ref|NP_634219.1| - 0.083 12.7 0.1 0.23 11.2 0.1 1.7 2 0 0 2 2 2 0 FAM193 family C-terminal TPD PF14811.6 gi|21228298|ref|NP_634220.1| - 1.8e-49 167.1 0.2 2.6e-49 166.6 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif N6_Mtase PF02384.16 gi|21228300|ref|NP_634222.1| - 2.5e-113 378.5 0.0 3.3e-113 378.1 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|21228300|ref|NP_634222.1| - 8.8e-26 91.2 0.0 2.5e-25 89.7 0.0 1.8 1 0 0 1 1 1 1 HsdM N-terminal domain MTS PF05175.14 gi|21228300|ref|NP_634222.1| - 6.5e-06 25.8 0.0 1.4e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain AviRa PF11599.8 gi|21228300|ref|NP_634222.1| - 0.011 15.2 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 RRNA methyltransferase AviRa UPF0020 PF01170.18 gi|21228300|ref|NP_634222.1| - 0.032 13.9 1.2 0.18 11.4 1.2 2.0 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Cons_hypoth95 PF03602.15 gi|21228300|ref|NP_634222.1| - 0.034 13.8 0.0 0.19 11.4 0.0 2.1 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Methylase_S PF01420.19 gi|21228301|ref|NP_634223.1| - 1.9e-35 122.6 0.3 1.8e-27 96.6 0.3 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain TssO PF17561.2 gi|21228302|ref|NP_634224.1| - 0.29 11.2 11.2 1.2 9.2 0.2 2.6 2 1 0 2 2 2 0 Type VI secretion system, TssO DUF4868 PF16162.5 gi|21228303|ref|NP_634225.1| - 5e-38 130.9 15.9 9.2e-38 130.1 15.9 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4868) HTH_Crp_2 PF13545.6 gi|21228304|ref|NP_634226.1| - 0.083 12.9 0.0 0.22 11.5 0.0 1.7 1 1 1 2 2 2 0 Crp-like helix-turn-helix domain Virulence_RhuM PF13310.6 gi|21228305|ref|NP_634227.1| - 1.1e-116 388.5 8.0 1.4e-116 388.2 8.0 1.1 1 0 0 1 1 1 1 Virulence protein RhuM family HTH_5 PF01022.20 gi|21228305|ref|NP_634227.1| - 0.045 13.6 0.0 0.098 12.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF3387 PF11867.8 gi|21228306|ref|NP_634228.1| - 3.6e-133 444.0 16.4 3.6e-133 444.0 16.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF3387) SWI2_SNF2 PF18766.1 gi|21228306|ref|NP_634228.1| - 1.1e-80 270.5 0.1 1.1e-80 270.5 0.1 1.7 2 0 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|21228306|ref|NP_634228.1| - 1.8e-50 171.6 0.0 1.8e-50 171.6 0.0 3.2 3 0 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|21228306|ref|NP_634228.1| - 8.9e-17 61.6 1.3 1.8e-16 60.6 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|21228306|ref|NP_634228.1| - 0.00066 20.0 0.0 0.16 12.3 0.0 3.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain HSDR_N_2 PF13588.6 gi|21228306|ref|NP_634228.1| - 0.0041 17.1 0.0 0.02 14.9 0.0 2.2 1 0 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) Chordopox_G3 PF06129.12 gi|21228306|ref|NP_634228.1| - 0.0094 16.6 0.3 0.54 11.0 0.1 3.0 2 0 0 2 2 2 1 Chordopoxvirus G3 protein Glyco_hydro_44 PF12891.7 gi|21228306|ref|NP_634228.1| - 0.038 13.9 0.1 0.15 12.0 0.0 1.9 2 0 0 2 2 2 0 Glycoside hydrolase family 44 DUF2285 PF10074.9 gi|21228306|ref|NP_634228.1| - 0.12 13.0 0.8 8.7 7.1 0.1 3.1 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2285) Pribosyltran_N PF13793.6 gi|21228307|ref|NP_634229.1| - 5.2e-27 94.1 0.0 1.7e-25 89.2 0.0 2.1 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|21228307|ref|NP_634229.1| - 1e-14 54.3 0.1 1.8e-14 53.5 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|21228307|ref|NP_634229.1| - 8.5e-08 32.4 0.6 1.3e-07 31.8 0.6 1.2 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|21228307|ref|NP_634229.1| - 1.5e-05 24.5 0.1 2.9e-05 23.6 0.1 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|21228307|ref|NP_634229.1| - 0.0018 17.8 0.2 0.0036 16.8 0.2 1.5 1 1 0 1 1 1 1 Phosphoribosyl transferase MoaC PF01967.21 gi|21228308|ref|NP_634230.1| - 4.1e-49 166.2 2.3 4.7e-49 166.0 2.3 1.0 1 0 0 1 1 1 1 MoaC family Phage_TAC_11 PF11836.8 gi|21228309|ref|NP_634231.1| - 0.039 14.1 0.1 0.047 13.8 0.1 1.1 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 Carb_kinase PF01256.17 gi|21228310|ref|NP_634232.1| - 8.1e-52 176.1 0.2 1.1e-51 175.6 0.2 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|21228310|ref|NP_634232.1| - 2.8e-39 134.8 0.1 8e-38 130.0 0.0 2.2 2 0 0 2 2 2 1 YjeF-related protein N-terminus HK PF02110.15 gi|21228310|ref|NP_634232.1| - 9e-11 41.6 0.0 1.4e-09 37.7 0.0 2.1 2 0 0 2 2 2 1 Hydroxyethylthiazole kinase family TrkA_N PF02254.18 gi|21228311|ref|NP_634233.1| - 1.4e-23 83.4 0.1 3.6e-23 82.0 0.1 1.8 1 0 0 1 1 1 1 TrkA-N domain DHHA1 PF02272.19 gi|21228311|ref|NP_634233.1| - 4.5e-15 56.3 0.2 1.8e-14 54.3 0.0 2.1 2 0 0 2 2 1 1 DHHA1 domain DHH PF01368.20 gi|21228311|ref|NP_634233.1| - 2.5e-14 53.3 0.0 1.4e-13 50.9 0.1 2.1 2 0 0 2 2 2 1 DHH family F420_oxidored PF03807.17 gi|21228311|ref|NP_634233.1| - 0.00054 20.5 0.0 0.0012 19.4 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|21228311|ref|NP_634233.1| - 0.00058 19.5 0.0 0.0011 18.6 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|21228311|ref|NP_634233.1| - 0.0018 18.3 0.0 0.0048 16.9 0.0 1.7 1 1 1 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 gi|21228311|ref|NP_634233.1| - 0.0049 16.5 0.0 0.0094 15.5 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|21228311|ref|NP_634233.1| - 0.01 16.1 0.0 0.022 15.0 0.0 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Epimerase PF01370.21 gi|21228311|ref|NP_634233.1| - 0.021 14.3 0.0 0.034 13.6 0.0 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Methyltransf_31 PF13847.6 gi|21228311|ref|NP_634233.1| - 0.025 14.3 0.1 0.049 13.4 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain TyeA PF09059.10 gi|21228311|ref|NP_634233.1| - 0.029 14.5 0.0 0.071 13.2 0.0 1.6 1 0 0 1 1 1 0 TyeA Shikimate_DH PF01488.20 gi|21228311|ref|NP_634233.1| - 0.06 13.4 0.0 0.17 11.9 0.0 1.9 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Pyr_redox PF00070.27 gi|21228311|ref|NP_634233.1| - 0.069 13.7 0.1 1.9 9.1 0.0 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|21228311|ref|NP_634233.1| - 0.072 12.3 0.0 0.18 11.1 0.0 1.6 2 0 0 2 2 2 0 FAD binding domain adh_short PF00106.25 gi|21228311|ref|NP_634233.1| - 0.082 12.3 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 short chain dehydrogenase Polysacc_synt_2 PF02719.15 gi|21228311|ref|NP_634233.1| - 0.1 11.7 0.1 0.29 10.2 0.1 1.7 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein NAD_binding_7 PF13241.6 gi|21228311|ref|NP_634233.1| - 0.12 12.9 0.0 0.29 11.6 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding PrpR_N PF06506.11 gi|21228311|ref|NP_634233.1| - 0.13 11.8 0.0 0.46 10.0 0.0 2.0 2 0 0 2 2 2 0 Propionate catabolism activator AglB_L1 PF18079.1 gi|21228312|ref|NP_634234.1| - 3.1e-23 81.9 0.3 9e-23 80.4 0.3 1.8 1 0 0 1 1 1 1 Archaeal glycosylation protein B long peripheral domain STT3 PF02516.14 gi|21228312|ref|NP_634234.1| - 1.7e-15 57.0 35.2 1.3e-14 54.0 35.2 2.1 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.6 gi|21228312|ref|NP_634234.1| - 1e-08 35.5 1.2 1e-08 35.5 1.2 4.8 3 1 1 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Imm61 PF15598.6 gi|21228312|ref|NP_634234.1| - 0.14 12.0 0.1 1.3 8.9 0.0 2.5 3 0 0 3 3 3 0 Immunity protein 61 Acyl_transf_3 PF01757.22 gi|21228314|ref|NP_634236.1| - 2.2e-31 109.2 52.4 2.8e-31 108.8 52.4 1.1 1 0 0 1 1 1 1 Acyltransferase family DUF1624 PF07786.12 gi|21228314|ref|NP_634236.1| - 3.2e-05 23.6 26.3 0.0001 22.0 18.5 3.2 1 1 0 2 2 2 2 Protein of unknown function (DUF1624) Methyltransf_11 PF08241.12 gi|21228315|ref|NP_634237.1| - 3.9e-26 91.5 0.0 4.6e-19 68.9 0.0 2.9 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21228315|ref|NP_634237.1| - 7.9e-26 90.7 5.2 7.9e-23 80.9 0.1 3.1 3 0 0 3 3 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21228315|ref|NP_634237.1| - 8.8e-23 80.9 0.1 5.8e-15 55.5 0.0 2.6 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228315|ref|NP_634237.1| - 1e-18 67.8 0.0 8e-17 61.7 0.0 3.1 3 0 0 3 3 2 1 Methyltransferase domain Glycos_transf_2 PF00535.26 gi|21228315|ref|NP_634237.1| - 7.3e-15 55.2 0.0 2.4e-14 53.5 0.0 2.0 2 0 0 2 2 1 1 Glycosyl transferase family 2 Methyltransf_12 PF08242.12 gi|21228315|ref|NP_634237.1| - 3.3e-14 53.4 0.7 6.5e-11 42.8 0.0 3.8 4 0 0 4 4 2 1 Methyltransferase domain Glycos_transf_1 PF00534.20 gi|21228315|ref|NP_634237.1| - 7.4e-10 38.6 0.4 2.4e-09 37.0 0.0 2.2 2 0 0 2 2 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21228315|ref|NP_634237.1| - 7.9e-09 35.7 0.0 2.3e-08 34.2 0.0 1.8 2 0 0 2 2 1 1 Glycosyltransferase Family 4 CMAS PF02353.20 gi|21228315|ref|NP_634237.1| - 1e-07 31.5 0.1 3.9e-07 29.6 0.1 2.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|21228315|ref|NP_634237.1| - 1.6e-07 31.1 0.0 9.5e-06 25.3 0.0 3.0 3 0 0 3 3 3 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|21228315|ref|NP_634237.1| - 2.4e-07 30.3 0.0 6.7e-05 22.3 0.0 2.9 3 0 0 3 3 2 1 ubiE/COQ5 methyltransferase family Glyco_trans_1_4 PF13692.6 gi|21228315|ref|NP_634237.1| - 1.6e-06 28.6 0.0 7.7e-06 26.4 0.0 2.2 2 0 0 2 2 1 1 Glycosyl transferases group 1 Glyco_transf_21 PF13506.6 gi|21228315|ref|NP_634237.1| - 4e-05 23.1 0.0 7.7e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 TehB PF03848.14 gi|21228315|ref|NP_634237.1| - 0.00011 21.7 0.0 0.00011 21.7 0.0 2.4 2 0 0 2 2 2 1 Tellurite resistance protein TehB Glyco_tranf_2_3 PF13641.6 gi|21228315|ref|NP_634237.1| - 0.00013 22.0 0.0 0.00032 20.7 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase like family 2 MetW PF07021.12 gi|21228315|ref|NP_634237.1| - 0.0004 20.0 0.1 0.0071 16.0 0.0 2.6 3 0 0 3 3 2 1 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|21228315|ref|NP_634237.1| - 0.00047 19.6 0.9 0.0009 18.7 0.0 1.9 2 0 0 2 2 1 1 Ribosomal protein L11 methyltransferase (PrmA) Glyco_trans_2_3 PF13632.6 gi|21228315|ref|NP_634237.1| - 0.00055 19.9 0.0 0.0013 18.7 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family group 2 TPMT PF05724.11 gi|21228315|ref|NP_634237.1| - 0.0013 18.4 0.0 0.0051 16.5 0.0 1.9 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Filament PF00038.21 gi|21228315|ref|NP_634237.1| - 0.0028 17.3 3.1 0.0028 17.3 3.1 2.1 2 0 0 2 2 1 1 Intermediate filament protein BLOC1_2 PF10046.9 gi|21228315|ref|NP_634237.1| - 0.011 16.0 2.4 0.051 13.9 2.4 2.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Jnk-SapK_ap_N PF09744.9 gi|21228315|ref|NP_634237.1| - 0.011 16.0 2.4 0.011 16.0 2.4 2.6 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 Laminin_II PF06009.12 gi|21228315|ref|NP_634237.1| - 0.013 15.5 0.5 0.013 15.5 0.5 1.9 2 0 0 2 2 1 0 Laminin Domain II TMPIT PF07851.13 gi|21228315|ref|NP_634237.1| - 0.023 13.9 2.2 0.077 12.2 2.2 1.8 1 0 0 1 1 1 0 TMPIT-like protein CLZ PF16526.5 gi|21228315|ref|NP_634237.1| - 0.028 14.8 0.2 0.17 12.3 0.2 2.5 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels CREPT PF16566.5 gi|21228315|ref|NP_634237.1| - 0.028 14.6 1.2 0.1 12.7 1.2 2.0 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour SMC_Nse1 PF07574.13 gi|21228315|ref|NP_634237.1| - 0.036 14.0 2.8 3.7 7.4 0.0 3.4 3 0 0 3 3 3 0 Nse1 non-SMC component of SMC5-6 complex DUF3450 PF11932.8 gi|21228315|ref|NP_634237.1| - 0.06 12.6 3.0 0.11 11.8 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DivIC PF04977.15 gi|21228315|ref|NP_634237.1| - 0.078 12.7 2.2 0.52 10.1 2.2 2.4 1 0 0 1 1 1 0 Septum formation initiator Methyltransf_29 PF03141.16 gi|21228315|ref|NP_634237.1| - 0.081 11.5 0.4 0.17 10.4 0.0 1.8 2 0 0 2 2 2 0 Putative S-adenosyl-L-methionine-dependent methyltransferase PHM7_cyt PF14703.6 gi|21228315|ref|NP_634237.1| - 0.2 11.9 2.6 0.69 10.1 2.6 1.9 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter CEP63 PF17045.5 gi|21228315|ref|NP_634237.1| - 0.23 11.3 9.1 0.014 15.3 3.3 1.8 2 0 0 2 2 1 0 Centrosomal protein of 63 kDa Phage_GP20 PF06810.11 gi|21228315|ref|NP_634237.1| - 0.26 11.1 5.5 0.17 11.7 1.1 2.8 2 0 0 2 2 2 0 Phage minor structural protein GP20 DUF4407 PF14362.6 gi|21228315|ref|NP_634237.1| - 0.28 10.5 2.8 0.48 9.7 2.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TSC22 PF01166.18 gi|21228315|ref|NP_634237.1| - 0.3 11.4 1.6 3.9 7.9 1.1 3.3 3 0 0 3 3 1 0 TSC-22/dip/bun family Spc24 PF08286.11 gi|21228315|ref|NP_634237.1| - 0.38 11.0 8.9 0.12 12.7 0.3 3.5 3 1 0 3 3 2 0 Spc24 subunit of Ndc80 XhlA PF10779.9 gi|21228315|ref|NP_634237.1| - 0.41 10.9 5.4 0.84 9.9 3.2 2.7 1 1 1 2 2 2 0 Haemolysin XhlA HAUS6_N PF14661.6 gi|21228315|ref|NP_634237.1| - 0.41 10.2 2.3 0.85 9.2 2.3 1.5 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Spc7 PF08317.11 gi|21228315|ref|NP_634237.1| - 0.51 9.2 11.9 0.017 14.0 4.1 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein Seryl_tRNA_N PF02403.22 gi|21228315|ref|NP_634237.1| - 0.62 10.3 4.5 1.1 9.5 1.9 2.8 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF4337 PF14235.6 gi|21228315|ref|NP_634237.1| - 0.92 9.6 2.6 3.9 7.6 2.6 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) DUF724 PF05266.14 gi|21228315|ref|NP_634237.1| - 1.2 9.0 10.4 0.047 13.5 3.8 2.1 2 0 0 2 2 1 0 Protein of unknown function (DUF724) FlaC_arch PF05377.11 gi|21228315|ref|NP_634237.1| - 2.2 8.7 13.8 0.038 14.4 2.3 3.3 3 0 0 3 3 2 0 Flagella accessory protein C (FlaC) Fez1 PF06818.15 gi|21228315|ref|NP_634237.1| - 3.1 8.2 16.2 0.081 13.4 7.5 2.4 1 1 1 2 2 1 0 Fez1 ATG16 PF08614.11 gi|21228315|ref|NP_634237.1| - 5.5 7.1 8.1 1.2 9.3 1.9 2.4 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) ABC_tran PF00005.27 gi|21228316|ref|NP_634238.1| - 5.5e-22 78.8 0.0 2.2e-21 76.8 0.0 2.1 1 1 0 1 1 1 1 ABC transporter Hexapep PF00132.24 gi|21228316|ref|NP_634238.1| - 1.9e-10 40.1 9.4 7.3e-08 31.8 7.1 3.0 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21228316|ref|NP_634238.1| - 5.2e-09 35.7 7.5 5.2e-09 35.7 7.5 2.3 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase AAA_21 PF13304.6 gi|21228316|ref|NP_634238.1| - 2.8e-06 27.4 0.4 0.0052 16.6 0.5 2.7 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21228316|ref|NP_634238.1| - 4.9e-06 26.2 0.0 9.7e-06 25.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|21228316|ref|NP_634238.1| - 0.00043 20.8 1.4 0.0009 19.8 0.8 1.9 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|21228316|ref|NP_634238.1| - 0.00097 18.9 1.4 0.00097 18.9 1.4 2.2 2 1 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 gi|21228316|ref|NP_634238.1| - 0.0027 17.2 0.4 0.016 14.7 0.2 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|21228316|ref|NP_634238.1| - 0.021 14.6 0.0 0.092 12.5 0.0 2.0 1 1 0 1 1 1 0 AAA domain FBA_2 PF07735.17 gi|21228316|ref|NP_634238.1| - 0.03 14.4 3.3 3.9 7.7 1.2 2.5 2 0 0 2 2 2 0 F-box associated NTPase_1 PF03266.15 gi|21228316|ref|NP_634238.1| - 0.043 13.7 0.1 7.1 6.5 0.1 2.5 2 0 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 gi|21228316|ref|NP_634238.1| - 0.11 12.3 0.1 0.31 10.9 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase DUF87 PF01935.17 gi|21228316|ref|NP_634238.1| - 0.12 12.4 1.8 0.32 11.0 0.3 2.4 2 1 1 3 3 3 0 Helicase HerA, central domain ATP-synt_ab PF00006.25 gi|21228316|ref|NP_634238.1| - 0.14 11.8 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_16 PF13191.6 gi|21228316|ref|NP_634238.1| - 0.23 11.8 0.0 0.36 11.2 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain ABC2_membrane PF01061.24 gi|21228317|ref|NP_634239.1| - 8.3e-20 71.1 28.6 8.3e-20 71.1 28.6 1.3 2 0 0 2 2 2 1 ABC-2 type transporter NTP_transferase PF00483.23 gi|21228318|ref|NP_634240.1| - 7.5e-57 192.7 0.0 9.2e-57 192.5 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|21228318|ref|NP_634240.1| - 4.5e-12 46.6 0.0 4.9e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|21228318|ref|NP_634240.1| - 0.046 13.6 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase Glycos_transf_2 PF00535.26 gi|21228319|ref|NP_634241.1| - 1.1e-23 83.9 0.0 2e-23 83.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21228319|ref|NP_634241.1| - 2.5e-10 40.6 0.0 6.8e-10 39.2 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|21228319|ref|NP_634241.1| - 1.7e-05 24.5 0.0 4.4e-05 23.1 0.0 1.7 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.6 gi|21228319|ref|NP_634241.1| - 0.00018 21.3 0.1 0.00066 19.4 0.0 1.9 2 0 0 2 2 2 1 Glycosyltransferase like family DUF4858 PF16150.5 gi|21228319|ref|NP_634241.1| - 0.045 13.8 0.0 0.078 13.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4858) Glyco_tranf_2_4 PF13704.6 gi|21228319|ref|NP_634241.1| - 0.12 13.0 0.0 0.3 11.6 0.0 1.8 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.20 gi|21228320|ref|NP_634242.1| - 9.9e-45 152.2 0.4 2.4e-44 150.9 0.2 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21228320|ref|NP_634242.1| - 5.9e-33 114.1 0.0 1.1e-32 113.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21228320|ref|NP_634242.1| - 1.7e-16 60.7 0.0 2.8e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|21228320|ref|NP_634242.1| - 3e-09 37.0 0.2 2.3e-08 34.2 0.1 2.2 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|21228320|ref|NP_634242.1| - 6.3e-08 32.9 0.0 1.6e-07 31.6 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21228320|ref|NP_634242.1| - 0.00016 22.1 0.0 0.00028 21.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|21228320|ref|NP_634242.1| - 0.00091 19.0 0.0 1.2 8.7 0.0 2.5 1 1 1 2 2 2 2 Starch synthase catalytic domain DUF3880 PF12996.7 gi|21228320|ref|NP_634242.1| - 0.014 15.5 0.0 0.037 14.1 0.0 1.7 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) DUF2325 PF10087.9 gi|21228320|ref|NP_634242.1| - 0.11 12.6 0.1 1.6 8.9 0.0 2.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) Methyltransf_11 PF08241.12 gi|21228321|ref|NP_634243.1| - 2.4e-20 73.0 0.0 3.4e-20 72.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21228321|ref|NP_634243.1| - 1.7e-17 63.8 0.0 2.1e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228321|ref|NP_634243.1| - 8e-17 61.7 0.0 1.2e-16 61.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21228321|ref|NP_634243.1| - 1.1e-16 61.1 0.0 1.3e-16 60.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|21228321|ref|NP_634243.1| - 1.3e-13 51.0 0.0 1.7e-13 50.6 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_12 PF08242.12 gi|21228321|ref|NP_634243.1| - 1.1e-12 48.5 0.0 1.9e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21228321|ref|NP_634243.1| - 0.00012 21.5 0.0 0.00017 21.0 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 gi|21228321|ref|NP_634243.1| - 0.00013 21.9 0.0 0.00018 21.4 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase NodS PF05401.11 gi|21228321|ref|NP_634243.1| - 0.00016 21.3 0.0 0.00021 21.0 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|21228321|ref|NP_634243.1| - 0.00077 19.1 0.0 0.0011 18.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|21228321|ref|NP_634243.1| - 0.00089 18.7 0.0 0.0012 18.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 gi|21228321|ref|NP_634243.1| - 0.025 14.6 0.0 0.033 14.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain AdoMet_MTase PF07757.13 gi|21228321|ref|NP_634243.1| - 0.062 13.6 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase DREV PF05219.12 gi|21228321|ref|NP_634243.1| - 0.071 12.2 0.0 0.082 12.0 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase LPG_synthase_TM PF03706.13 gi|21228322|ref|NP_634244.1| - 1.2e-35 123.6 13.5 1.5e-35 123.2 13.5 1.2 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region DUF4191 PF13829.6 gi|21228322|ref|NP_634244.1| - 0.087 12.2 0.6 0.16 11.3 0.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4191) Glycos_transf_2 PF00535.26 gi|21228323|ref|NP_634245.1| - 1.8e-31 109.2 0.1 2.5e-31 108.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|21228323|ref|NP_634245.1| - 2.7e-10 40.2 1.0 3.1e-10 40.0 0.1 1.5 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|21228323|ref|NP_634245.1| - 5e-09 36.4 0.0 7e-09 35.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_7N PF13733.6 gi|21228323|ref|NP_634245.1| - 0.1 12.2 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 Glycos_transf_1 PF00534.20 gi|21228324|ref|NP_634246.1| - 7.8e-35 119.9 1.1 1.2e-34 119.4 1.1 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21228324|ref|NP_634246.1| - 7e-26 91.2 0.1 1.5e-25 90.2 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21228324|ref|NP_634246.1| - 1.7e-21 77.0 0.0 3.5e-21 75.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|21228324|ref|NP_634246.1| - 1.8e-12 48.0 0.0 2.6e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|21228324|ref|NP_634246.1| - 1e-06 29.0 0.0 2e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 gi|21228324|ref|NP_634246.1| - 0.0086 15.0 0.0 0.011 14.7 0.0 1.2 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF309 PF03745.14 gi|21228324|ref|NP_634246.1| - 0.051 13.3 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF309) Sir1 PF11603.8 gi|21228324|ref|NP_634246.1| - 0.12 12.8 0.1 0.23 12.0 0.1 1.4 1 0 0 1 1 1 0 Regulatory protein Sir1 Glycos_transf_2 PF00535.26 gi|21228325|ref|NP_634247.1| - 2.5e-21 76.2 0.0 3.8e-21 75.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|21228325|ref|NP_634247.1| - 0.0041 16.6 0.0 0.013 15.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_3 PF13641.6 gi|21228325|ref|NP_634247.1| - 0.01 15.8 0.0 0.013 15.5 0.0 1.4 1 1 0 1 1 1 0 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|21228325|ref|NP_634247.1| - 0.13 12.7 0.0 0.32 11.5 0.0 1.6 1 1 0 1 1 1 0 Glycosyl transferase family 2 FMN_red PF03358.15 gi|21228326|ref|NP_634248.1| - 2.4e-14 53.3 0.1 3.5e-14 52.8 0.1 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21228326|ref|NP_634248.1| - 0.0052 16.5 0.0 0.0073 16.0 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Glyco_transf_36 PF06165.11 gi|21228327|ref|NP_634249.1| - 0.0016 17.9 0.1 0.004 16.6 0.1 1.7 1 1 0 1 1 1 1 Glycosyltransferase family 36 Glyco_hydro_15 PF00723.21 gi|21228327|ref|NP_634249.1| - 0.014 14.2 0.0 0.05 12.4 0.0 1.8 2 0 0 2 2 2 0 Glycosyl hydrolases family 15 Glyco_hydro_15 PF00723.21 gi|21228328|ref|NP_634250.1| - 3.3e-09 36.0 0.0 4.6e-07 29.0 0.0 2.2 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 DUF608 PF04685.13 gi|21228328|ref|NP_634250.1| - 0.062 12.5 0.0 0.084 12.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl-hydrolase family 116, catalytic region Acetyltransf_1 PF00583.25 gi|21228329|ref|NP_634251.1| - 3.2e-13 50.0 0.1 3.8e-13 49.7 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21228329|ref|NP_634251.1| - 2.6e-11 43.8 0.1 3.9e-11 43.2 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21228329|ref|NP_634251.1| - 8.6e-10 38.6 0.0 9.7e-10 38.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21228329|ref|NP_634251.1| - 3.8e-05 23.7 0.0 6.5e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 gi|21228329|ref|NP_634251.1| - 0.00097 19.8 0.0 0.0011 19.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|21228329|ref|NP_634251.1| - 0.0045 16.5 0.1 0.011 15.2 0.1 1.6 1 1 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_4 PF13420.7 gi|21228329|ref|NP_634251.1| - 0.0047 17.1 0.1 0.0058 16.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21228329|ref|NP_634251.1| - 0.12 12.3 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 FR47-like protein Peptidase_M20 PF01546.28 gi|21228330|ref|NP_634252.1| - 1.8e-25 89.9 0.1 2.5e-25 89.4 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|21228330|ref|NP_634252.1| - 4.6e-08 33.0 0.0 9.6e-08 31.9 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain NTP_transf_2 PF01909.23 gi|21228331|ref|NP_634253.1| - 7.6e-05 22.9 0.0 0.00029 21.1 0.0 1.9 1 1 0 1 1 1 1 Nucleotidyltransferase domain DDE_3 PF13358.6 gi|21228332|ref|NP_634254.1| - 1.9e-28 99.0 0.0 2.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_1 PF01609.21 gi|21228333|ref|NP_634255.1| - 6.5e-18 65.2 0.2 9.7e-18 64.6 0.2 1.2 1 0 0 1 1 1 1 Transposase DDE domain DUF4096 PF13340.6 gi|21228333|ref|NP_634255.1| - 2.2e-13 50.2 0.2 6.5e-13 48.7 0.2 1.9 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1_2 PF13586.6 gi|21228333|ref|NP_634255.1| - 6.2e-13 48.9 1.3 9.1e-13 48.4 1.3 1.3 1 0 0 1 1 1 1 Transposase DDE domain HTH_29 PF13551.6 gi|21228334|ref|NP_634256.1| - 8e-12 45.0 0.0 1.1e-11 44.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.6 gi|21228334|ref|NP_634256.1| - 1.3e-06 28.0 0.0 2.2e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_32 PF13565.6 gi|21228334|ref|NP_634256.1| - 0.0012 19.4 0.1 0.36 11.5 0.0 2.1 2 0 0 2 2 2 2 Homeodomain-like domain HTH_28 PF13518.6 gi|21228334|ref|NP_634256.1| - 0.055 13.6 0.0 0.093 12.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain TFX_C PF14601.6 gi|21228334|ref|NP_634256.1| - 0.12 12.4 0.2 0.17 11.9 0.2 1.4 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term PKD PF00801.20 gi|21228335|ref|NP_634257.1| - 7.3e-08 32.1 3.2 7.6e-08 32.1 0.8 2.2 2 0 0 2 2 2 1 PKD domain NPCBM_assoc PF10633.9 gi|21228335|ref|NP_634257.1| - 2.5e-05 24.4 1.2 0.03 14.5 1.2 2.8 1 1 0 1 1 1 1 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|21228335|ref|NP_634257.1| - 0.026 14.8 0.1 0.076 13.3 0.1 1.8 1 0 0 1 1 1 0 Domain of unknown function DUF11 PKD_3 PF16820.5 gi|21228335|ref|NP_634257.1| - 0.11 12.3 2.1 0.3 10.8 0.2 2.5 2 0 0 2 2 2 0 PKD-like domain bMG10 PF17973.1 gi|21228335|ref|NP_634257.1| - 0.11 12.7 0.1 0.36 11.0 0.0 1.9 2 0 0 2 2 2 0 Bacterial Alpha-2-macroglobulin MG10 domain DUF4139 PF13598.6 gi|21228336|ref|NP_634258.1| - 1.1e-08 35.1 1.5 3.5e-08 33.4 1.5 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4139) DUF4140 PF13600.6 gi|21228336|ref|NP_634258.1| - 0.00031 21.1 0.3 0.0016 18.8 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of unknown function (DUF4140) LSM PF01423.22 gi|21228336|ref|NP_634258.1| - 0.0099 15.6 0.0 0.022 14.4 0.0 1.6 1 0 0 1 1 1 1 LSM domain Top6b_C PF18000.1 gi|21228336|ref|NP_634258.1| - 0.076 13.2 2.1 0.085 13.0 0.5 2.0 2 0 0 2 2 2 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain CMD PF02627.20 gi|21228338|ref|NP_634260.1| - 1.1e-20 73.4 0.1 1.5e-20 73.0 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family FlhD PF05247.13 gi|21228338|ref|NP_634260.1| - 0.02 15.1 0.1 0.026 14.8 0.1 1.3 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) HTH_5 PF01022.20 gi|21228339|ref|NP_634261.1| - 1.2e-12 47.5 0.2 2.1e-12 46.7 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21228339|ref|NP_634261.1| - 0.00022 21.2 0.0 0.00031 20.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DDE_Tnp_IS1 PF03400.13 gi|21228340|ref|NP_634262.1| - 5.9e-06 26.6 0.0 8.6e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 IS1 transposase rve_3 PF13683.6 gi|21228340|ref|NP_634262.1| - 9.1e-05 22.2 0.1 0.00019 21.1 0.1 1.5 1 0 0 1 1 1 1 Integrase core domain HTH_29 PF13551.6 gi|21228341|ref|NP_634263.1| - 0.052 13.6 0.0 0.096 12.7 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_23 PF13384.6 gi|21228341|ref|NP_634263.1| - 0.086 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Thioredoxin PF00085.20 gi|21228342|ref|NP_634264.1| - 2.2e-06 27.6 0.0 5.1e-06 26.4 0.0 1.6 2 0 0 2 2 2 1 Thioredoxin DIM1 PF02966.16 gi|21228342|ref|NP_634264.1| - 0.00058 19.6 0.0 0.00081 19.2 0.0 1.3 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_6 PF13848.6 gi|21228342|ref|NP_634264.1| - 0.011 15.7 0.0 0.03 14.2 0.0 1.6 2 0 0 2 2 2 0 Thioredoxin-like domain DsbD PF02683.15 gi|21228343|ref|NP_634265.1| - 1.5e-32 113.3 26.9 3e-32 112.3 26.9 1.4 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|21228343|ref|NP_634265.1| - 1.3e-13 51.3 21.5 1.7e-13 51.0 21.5 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Pox_P21 PF05313.12 gi|21228343|ref|NP_634265.1| - 6.8 6.2 12.8 0.28 10.7 2.1 2.3 1 1 0 2 2 2 0 Poxvirus P21 membrane protein HTH_5 PF01022.20 gi|21228344|ref|NP_634266.1| - 4.2e-14 52.1 0.1 7.9e-14 51.2 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21228344|ref|NP_634266.1| - 2.3e-10 40.4 0.0 3.2e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|21228344|ref|NP_634266.1| - 0.00086 19.6 0.2 0.0019 18.6 0.2 1.6 1 1 0 1 1 1 1 Penicillinase repressor HTH_24 PF13412.6 gi|21228344|ref|NP_634266.1| - 0.0034 16.9 0.0 0.22 11.1 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 gi|21228344|ref|NP_634266.1| - 0.031 14.2 0.1 0.064 13.2 0.1 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_34 PF13601.6 gi|21228344|ref|NP_634266.1| - 0.033 14.4 0.1 0.053 13.7 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Cdc6_C PF09079.11 gi|21228344|ref|NP_634266.1| - 0.058 13.4 0.8 0.084 12.9 0.0 1.6 2 0 0 2 2 2 0 CDC6, C terminal winged helix domain Methyltransf_31 PF13847.6 gi|21228345|ref|NP_634267.1| - 3.4e-40 137.3 0.0 5e-40 136.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228345|ref|NP_634267.1| - 4.2e-24 85.1 0.0 9.3e-24 84.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21228345|ref|NP_634267.1| - 1.9e-23 82.9 0.0 5.3e-23 81.5 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21228345|ref|NP_634267.1| - 1.5e-19 70.3 0.0 2.6e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|21228345|ref|NP_634267.1| - 2.7e-13 50.1 0.0 3.8e-13 49.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21228345|ref|NP_634267.1| - 3.6e-12 46.9 0.0 6.3e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21228345|ref|NP_634267.1| - 7.4e-12 45.5 0.0 1e-11 45.0 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 gi|21228345|ref|NP_634267.1| - 1.2e-07 31.6 0.0 2e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|21228345|ref|NP_634267.1| - 1.6e-07 31.0 0.0 2.6e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|21228345|ref|NP_634267.1| - 1.7e-06 27.7 0.0 2.5e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_8 PF05148.15 gi|21228345|ref|NP_634267.1| - 8.9e-06 25.7 0.2 2.4e-05 24.3 0.2 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_15 PF09445.10 gi|21228345|ref|NP_634267.1| - 2.5e-05 23.9 0.1 3.7e-05 23.4 0.1 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_32 PF13679.6 gi|21228345|ref|NP_634267.1| - 4.2e-05 23.6 0.0 6.4e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21228345|ref|NP_634267.1| - 4.5e-05 22.9 0.0 7.2e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase FtsJ PF01728.19 gi|21228345|ref|NP_634267.1| - 0.0013 18.9 0.0 0.0017 18.5 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_4 PF02390.17 gi|21228345|ref|NP_634267.1| - 0.0024 17.4 0.0 0.0058 16.1 0.0 1.6 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_18 PF12847.7 gi|21228345|ref|NP_634267.1| - 0.01 15.8 0.0 0.017 15.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain CheR PF01739.18 gi|21228345|ref|NP_634267.1| - 0.023 14.2 0.1 0.59 9.6 0.0 2.4 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain DOT1 PF08123.13 gi|21228345|ref|NP_634267.1| - 0.068 12.7 0.0 0.096 12.2 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_3 PF01596.17 gi|21228345|ref|NP_634267.1| - 0.1 11.7 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase LMWPc PF01451.21 gi|21228346|ref|NP_634268.1| - 2.2e-08 34.6 0.0 2.5e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase DUF2326 PF10088.9 gi|21228346|ref|NP_634268.1| - 0.11 12.2 0.1 0.21 11.3 0.0 1.5 2 0 0 2 2 2 0 Uncharacterised protein conserved in bacteria (DUF2326) P22_AR_N PF10547.9 gi|21228346|ref|NP_634268.1| - 0.12 12.7 0.0 0.2 12.0 0.0 1.4 1 0 0 1 1 1 0 P22_AR N-terminal domain ArsP_1 PF03773.13 gi|21228347|ref|NP_634269.1| - 7.3e-61 205.9 22.5 8.2e-61 205.7 22.5 1.0 1 0 0 1 1 1 1 Predicted permease HTH_5 PF01022.20 gi|21228348|ref|NP_634270.1| - 8.5e-19 67.2 1.4 1.9e-18 66.1 1.4 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21228348|ref|NP_634270.1| - 2.1e-15 56.5 0.1 3.4e-15 55.8 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|21228348|ref|NP_634270.1| - 0.0007 19.4 0.0 0.002 18.0 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF1387 PF07139.11 gi|21228348|ref|NP_634270.1| - 0.0084 15.9 0.6 0.012 15.4 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1387) HTH_24 PF13412.6 gi|21228348|ref|NP_634270.1| - 0.019 14.5 0.1 0.051 13.1 0.1 1.8 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|21228348|ref|NP_634270.1| - 0.019 15.1 0.2 0.076 13.2 0.1 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain PaaX PF07848.12 gi|21228348|ref|NP_634270.1| - 0.019 15.2 0.0 0.041 14.1 0.0 1.6 1 0 0 1 1 1 0 PaaX-like protein MarR_2 PF12802.7 gi|21228348|ref|NP_634270.1| - 0.033 14.1 0.0 0.08 12.8 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|21228348|ref|NP_634270.1| - 0.11 12.5 0.7 0.45 10.5 0.1 2.4 2 2 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|21228349|ref|NP_634271.1| - 2.4e-11 43.3 1.6 3.7e-08 33.1 0.0 2.9 3 1 1 4 4 4 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21228349|ref|NP_634271.1| - 2.1e-10 40.5 0.0 3.9e-10 39.6 0.0 1.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_CodY PF08222.11 gi|21228349|ref|NP_634271.1| - 0.0019 17.7 0.4 0.0088 15.6 0.0 2.0 2 0 0 2 2 2 1 CodY helix-turn-helix domain HTH_34 PF13601.6 gi|21228349|ref|NP_634271.1| - 0.0023 18.1 0.0 0.0045 17.1 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain Cdc6_C PF09079.11 gi|21228349|ref|NP_634271.1| - 0.007 16.3 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain TrmB PF01978.19 gi|21228349|ref|NP_634271.1| - 0.072 13.0 0.0 0.25 11.3 0.0 1.9 2 1 1 3 3 3 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|21228349|ref|NP_634271.1| - 0.14 11.8 4.1 9.2 5.9 0.0 3.3 3 1 1 4 4 4 0 Winged helix-turn-helix DNA-binding ArsP_1 PF03773.13 gi|21228350|ref|NP_634272.1| - 1.7e-70 237.5 22.3 1.9e-70 237.3 22.3 1.0 1 0 0 1 1 1 1 Predicted permease Thioredoxin_3 PF13192.6 gi|21228351|ref|NP_634273.1| - 8.6e-29 99.4 3.7 9.3e-29 99.3 3.7 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|21228351|ref|NP_634273.1| - 1.1e-06 28.7 0.9 2.4e-06 27.7 0.9 1.6 1 1 0 1 1 1 1 Glutaredoxin Thioredoxin_4 PF13462.6 gi|21228351|ref|NP_634273.1| - 0.0018 18.5 1.1 0.48 10.6 0.5 2.0 1 1 1 2 2 2 2 Thioredoxin ArsD PF06953.11 gi|21228351|ref|NP_634273.1| - 0.0018 18.6 0.1 0.004 17.5 0.1 1.6 1 1 0 1 1 1 1 Arsenical resistance operon trans-acting repressor ArsD FtsK_alpha PF17854.1 gi|21228351|ref|NP_634273.1| - 0.0068 16.5 0.1 0.0078 16.3 0.1 1.1 1 0 0 1 1 1 1 FtsK alpha domain DUF953 PF06110.11 gi|21228351|ref|NP_634273.1| - 0.011 15.3 0.1 0.012 15.2 0.1 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) DUF836 PF05768.14 gi|21228351|ref|NP_634273.1| - 0.013 15.9 0.1 0.013 15.9 0.1 1.1 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Thioredoxin_2 PF13098.6 gi|21228351|ref|NP_634273.1| - 0.017 15.5 0.6 0.21 12.0 0.6 2.0 1 1 0 1 1 1 0 Thioredoxin-like domain BAT PF15915.5 gi|21228351|ref|NP_634273.1| - 0.023 14.6 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 GAF and HTH_10 associated domain DUF1335 PF07056.11 gi|21228351|ref|NP_634273.1| - 0.082 13.0 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1335) MtrA PF04208.14 gi|21228353|ref|NP_634275.1| - 1.2e-45 155.2 0.0 1.5e-45 154.9 0.0 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A Disaggr_assoc PF08480.10 gi|21228354|ref|NP_634276.1| - 5.8e-79 264.4 11.5 5.8e-79 264.4 11.5 2.6 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|21228354|ref|NP_634276.1| - 4.1e-14 52.7 45.5 2.1e-12 47.2 24.2 3.3 2 1 1 3 3 3 2 Right handed beta helix region DUF5123 PF17161.4 gi|21228354|ref|NP_634276.1| - 0.00012 23.1 6.5 0.00012 23.1 6.5 4.1 2 2 0 3 3 3 1 Domain of unknown function (DUF5123) RP854 PF17460.2 gi|21228354|ref|NP_634276.1| - 0.062 13.1 0.7 0.15 11.8 0.4 1.8 2 0 0 2 2 2 0 Uncharacterized protein RP854 Hydantoinase_A PF01968.18 gi|21228355|ref|NP_634277.1| - 6.5e-33 114.2 2.0 1e-31 110.3 0.0 2.9 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|21228355|ref|NP_634277.1| - 2.6e-25 89.1 2.9 4.2e-22 78.7 0.2 3.4 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|21228355|ref|NP_634277.1| - 1.9e-05 23.5 0.5 0.062 11.9 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|21228355|ref|NP_634277.1| - 0.075 12.5 0.1 0.6 9.5 0.0 2.3 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family CTP_synth_N PF06418.14 gi|21228355|ref|NP_634277.1| - 0.13 11.6 0.0 0.49 9.7 0.0 1.9 2 0 0 2 2 2 0 CTP synthase N-terminus ROK PF00480.20 gi|21228355|ref|NP_634277.1| - 0.13 11.7 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 ROK family Methyltransf_12 PF08242.12 gi|21228358|ref|NP_634280.1| - 4.9e-13 49.7 0.0 7.9e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228358|ref|NP_634280.1| - 5.5e-13 49.4 0.0 9.6e-13 48.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21228358|ref|NP_634280.1| - 1.5e-12 48.0 0.0 2.3e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21228358|ref|NP_634280.1| - 8.4e-12 44.9 0.3 1.7e-11 43.9 0.3 1.6 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|21228358|ref|NP_634280.1| - 5.6e-11 42.5 0.0 7.3e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21228358|ref|NP_634280.1| - 6.6e-10 39.0 0.0 7.5e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21228358|ref|NP_634280.1| - 1.4e-07 31.1 0.0 2.1e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|21228358|ref|NP_634280.1| - 1.5e-05 24.6 0.0 2.9e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.14 gi|21228358|ref|NP_634280.1| - 0.00027 20.4 0.0 0.00039 19.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB PrmA PF06325.13 gi|21228358|ref|NP_634280.1| - 0.003 17.0 0.0 0.0042 16.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 gi|21228358|ref|NP_634280.1| - 0.003 17.3 0.0 0.0049 16.7 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.11 gi|21228358|ref|NP_634280.1| - 0.011 15.3 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) TPMT PF05724.11 gi|21228358|ref|NP_634280.1| - 0.068 12.8 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_4 PF02390.17 gi|21228358|ref|NP_634280.1| - 0.087 12.3 0.0 0.27 10.7 0.0 1.7 2 0 0 2 2 2 0 Putative methyltransferase FOXO-TAD PF16676.5 gi|21228358|ref|NP_634280.1| - 0.2 12.1 0.1 0.54 10.7 0.1 1.8 2 0 0 2 2 2 0 Transactivation domain of FOXO protein family DUF1729 PF08354.10 gi|21228359|ref|NP_634281.1| - 0.034 13.0 0.1 0.034 13.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1729) Z1 PF10593.9 gi|21228359|ref|NP_634281.1| - 0.064 12.7 0.1 0.066 12.7 0.1 1.1 1 0 0 1 1 1 0 Z1 domain DsrH PF04077.12 gi|21228360|ref|NP_634282.1| - 6.3e-07 29.4 0.0 8.2e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 DsrH like protein DrsE PF02635.15 gi|21228361|ref|NP_634283.1| - 6.1e-09 36.3 0.0 7e-09 36.1 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DsrH PF04077.12 gi|21228361|ref|NP_634283.1| - 0.0095 16.1 0.0 0.019 15.1 0.0 1.6 1 1 0 1 1 1 1 DsrH like protein DrsE PF02635.15 gi|21228362|ref|NP_634284.1| - 2.2e-20 73.2 0.0 2.6e-20 73.0 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family FTCD_N PF07837.12 gi|21228362|ref|NP_634284.1| - 0.17 11.6 0.0 0.22 11.3 0.0 1.2 1 0 0 1 1 1 0 Formiminotransferase domain, N-terminal subdomain FeS PF04060.13 gi|21228363|ref|NP_634285.1| - 5.1e-13 48.4 4.4 7.1e-13 48.0 2.4 2.1 2 0 0 2 2 2 1 Putative Fe-S cluster HTH_20 PF12840.7 gi|21228363|ref|NP_634285.1| - 3.2e-07 30.3 0.0 2.4e-06 27.5 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|21228363|ref|NP_634285.1| - 1e-06 28.5 0.0 3.4e-06 26.8 0.0 1.9 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family TBP PF00352.21 gi|21228363|ref|NP_634285.1| - 0.0048 16.8 0.0 0.011 15.6 0.0 1.6 1 0 0 1 1 1 1 Transcription factor TFIID (or TATA-binding protein, TBP) YhfH PF14149.6 gi|21228363|ref|NP_634285.1| - 0.0074 16.2 0.1 0.015 15.3 0.1 1.4 1 0 0 1 1 1 1 YhfH-like protein FeS PF04060.13 gi|21228364|ref|NP_634286.1| - 2.2e-13 49.6 1.8 4.2e-13 48.7 1.8 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster HTH_20 PF12840.7 gi|21228364|ref|NP_634286.1| - 0.00065 19.7 0.0 0.0016 18.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TBP PF00352.21 gi|21228364|ref|NP_634286.1| - 0.0098 15.8 0.0 0.019 14.9 0.0 1.5 1 0 0 1 1 1 1 Transcription factor TFIID (or TATA-binding protein, TBP) YhfH PF14149.6 gi|21228364|ref|NP_634286.1| - 0.033 14.2 0.7 0.065 13.2 0.7 1.5 1 0 0 1 1 1 0 YhfH-like protein CLTH PF10607.9 gi|21228364|ref|NP_634286.1| - 0.053 13.4 0.1 0.09 12.7 0.1 1.4 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain HTH_5 PF01022.20 gi|21228364|ref|NP_634286.1| - 0.064 13.1 0.0 0.17 11.7 0.0 1.7 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family Ribosomal_S10 PF00338.22 gi|21228365|ref|NP_634287.1| - 3.3e-27 94.6 0.0 3.7e-27 94.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 gi|21228365|ref|NP_634287.1| - 0.052 14.4 0.0 0.12 13.2 0.0 1.6 2 0 0 2 2 2 0 Primosomal protein N C-terminal domain GTP_EFTU PF00009.27 gi|21228366|ref|NP_634288.1| - 9.7e-58 194.9 0.0 1.4e-57 194.4 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|21228366|ref|NP_634288.1| - 1.6e-36 125.0 0.1 3.6e-36 123.9 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|21228366|ref|NP_634288.1| - 8.5e-16 58.1 2.1 4.7e-15 55.7 1.8 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|21228366|ref|NP_634288.1| - 1.3e-05 25.3 0.0 0.00018 21.6 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 gi|21228366|ref|NP_634288.1| - 0.00095 19.0 1.2 0.0024 17.7 1.2 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Gtr1_RagA PF04670.12 gi|21228366|ref|NP_634288.1| - 0.0043 16.5 0.0 0.045 13.1 0.0 2.0 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Dynamin_N PF00350.23 gi|21228366|ref|NP_634288.1| - 0.04 14.0 0.0 2.4 8.2 0.0 2.3 1 1 0 1 1 1 0 Dynamin family Roc PF08477.13 gi|21228366|ref|NP_634288.1| - 0.045 14.0 0.0 3.7 7.8 0.0 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Septin PF00735.18 gi|21228366|ref|NP_634288.1| - 0.059 12.6 0.0 0.16 11.2 0.0 1.6 1 1 0 1 1 1 0 Septin GTP_EFTU PF00009.27 gi|21228367|ref|NP_634289.1| - 1.8e-64 216.8 0.3 3.2e-64 216.0 0.3 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|21228367|ref|NP_634289.1| - 2.5e-29 101.5 0.9 8.1e-28 96.6 0.0 2.9 2 1 1 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 gi|21228367|ref|NP_634289.1| - 9.8e-25 86.4 0.0 2.9e-24 84.9 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 gi|21228367|ref|NP_634289.1| - 1.8e-24 85.6 1.2 5.4e-24 84.1 1.2 1.9 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 gi|21228367|ref|NP_634289.1| - 1.6e-16 60.5 0.7 5.7e-16 58.7 0.7 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|21228367|ref|NP_634289.1| - 6.3e-05 23.0 0.1 0.00019 21.5 0.1 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 gi|21228367|ref|NP_634289.1| - 0.00091 19.1 0.0 0.0021 17.9 0.0 1.6 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain Ras PF00071.22 gi|21228367|ref|NP_634289.1| - 0.11 12.1 0.1 0.22 11.1 0.1 1.4 1 0 0 1 1 1 0 Ras family TRADD_N PF09034.10 gi|21228367|ref|NP_634289.1| - 0.16 12.0 0.1 0.32 11.0 0.1 1.4 1 0 0 1 1 1 0 TRADD, N-terminal domain RsgA_GTPase PF03193.16 gi|21228367|ref|NP_634289.1| - 0.23 11.4 1.1 1.9 8.4 0.2 2.7 3 0 0 3 3 3 0 RsgA GTPase Ribosomal_S7 PF00177.21 gi|21228368|ref|NP_634290.1| - 2.2e-36 124.8 4.3 2.6e-36 124.5 4.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e DUF2420 PF10336.9 gi|21228368|ref|NP_634290.1| - 0.018 15.0 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) DNA_ligase_A_N PF04675.14 gi|21228368|ref|NP_634290.1| - 0.06 13.7 0.0 0.095 13.0 0.0 1.4 1 0 0 1 1 1 0 DNA ligase N terminus Ribosom_S12_S23 PF00164.25 gi|21228369|ref|NP_634291.1| - 1.4e-46 156.8 0.3 1.6e-46 156.6 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 KH_2 PF07650.17 gi|21228370|ref|NP_634292.1| - 7e-20 70.6 2.3 1.3e-13 50.6 0.1 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.6 gi|21228370|ref|NP_634292.1| - 4.8e-17 61.8 0.6 8.8e-15 54.6 0.1 2.2 2 0 0 2 2 2 2 NusA-like KH domain KH_1 PF00013.29 gi|21228370|ref|NP_634292.1| - 7.5e-07 28.9 0.3 0.05 13.4 0.0 2.4 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 gi|21228370|ref|NP_634292.1| - 2.1e-06 27.5 1.6 0.05 13.5 0.0 2.7 2 1 1 3 3 3 2 KH domain Ribosomal_L7Ae PF01248.26 gi|21228371|ref|NP_634293.1| - 6.2e-17 61.1 0.5 7.4e-17 60.9 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BRCT_3 PF18428.1 gi|21228371|ref|NP_634293.1| - 0.018 15.1 0.1 0.024 14.7 0.1 1.2 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain RNA_pol_Rpb1_5 PF04998.17 gi|21228372|ref|NP_634294.1| - 4e-54 183.8 1.1 7.2e-54 183.0 1.1 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 5 DUF1947 PF09183.10 gi|21228372|ref|NP_634294.1| - 0.14 12.5 1.9 0.33 11.3 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) RNA_pol_Rpb1_1 PF04997.12 gi|21228373|ref|NP_634295.1| - 2.3e-107 358.9 0.0 4.5e-107 358.0 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|21228373|ref|NP_634295.1| - 7.2e-72 241.0 0.1 1.2e-71 240.3 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_4 PF05000.17 gi|21228373|ref|NP_634295.1| - 1.2e-30 105.6 0.0 2.9e-30 104.4 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.18 gi|21228373|ref|NP_634295.1| - 6.1e-29 101.0 0.0 1.4e-28 99.8 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.17 gi|21228373|ref|NP_634295.1| - 2.8e-28 99.1 0.0 5.1e-28 98.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 Fer4_10 PF13237.6 gi|21228373|ref|NP_634295.1| - 4 7.6 10.1 0.16 12.1 0.2 3.0 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21228373|ref|NP_634295.1| - 6.7 7.3 11.9 0.31 11.6 0.3 3.1 3 0 0 3 3 3 0 4Fe-4S dicluster domain RNA_pol_Rpb2_6 PF00562.28 gi|21228374|ref|NP_634296.1| - 4.5e-125 417.8 0.0 5.8e-125 417.4 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 gi|21228374|ref|NP_634296.1| - 2.9e-28 98.1 0.1 8.1e-28 96.7 0.1 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 gi|21228374|ref|NP_634296.1| - 2.5e-23 82.1 0.3 4.8e-23 81.2 0.3 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|21228374|ref|NP_634296.1| - 1.1e-12 48.3 2.3 3.1e-12 46.9 2.3 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 DUF1451 PF07295.11 gi|21228374|ref|NP_634296.1| - 0.046 13.8 0.4 0.093 12.8 0.4 1.4 1 0 0 1 1 1 0 Zinc-ribbon containing domain YflT PF11181.8 gi|21228374|ref|NP_634296.1| - 0.053 14.0 0.5 0.71 10.4 0.0 2.5 3 0 0 3 3 3 0 Heat induced stress protein YflT RNA_pol_Rpb2_45 PF10385.9 gi|21228374|ref|NP_634296.1| - 0.07 13.4 0.5 0.22 11.8 0.2 2.0 2 0 0 2 2 2 0 RNA polymerase beta subunit external 1 domain Nudix_N_2 PF14803.6 gi|21228374|ref|NP_634296.1| - 0.073 13.0 0.5 17 5.5 0.0 2.6 2 0 0 2 2 2 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|21228374|ref|NP_634296.1| - 0.17 11.7 1.3 3.7 7.4 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain SAP PF02037.27 gi|21228374|ref|NP_634296.1| - 0.24 11.2 0.5 0.67 9.8 0.0 2.0 2 0 0 2 2 2 0 SAP domain RNA_pol_Rpb2_1 PF04563.15 gi|21228375|ref|NP_634297.1| - 2.6e-51 174.1 0.2 3.5e-51 173.6 0.2 1.2 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|21228375|ref|NP_634297.1| - 1.1e-29 103.4 0.3 1.8e-29 102.8 0.3 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.16 gi|21228375|ref|NP_634297.1| - 6.6e-25 87.1 0.0 1.1e-24 86.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb5_C PF01191.19 gi|21228376|ref|NP_634298.1| - 2.3e-29 101.1 0.1 2.8e-29 100.8 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain PocR PF10114.9 gi|21228377|ref|NP_634299.1| - 5.7e-46 156.2 0.0 1.5e-45 154.9 0.0 1.8 1 0 0 1 1 1 1 Sensory domain found in PocR MEDS PF14417.6 gi|21228377|ref|NP_634299.1| - 2.6e-40 137.9 0.0 5.7e-40 136.8 0.0 1.6 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_3 PF08447.12 gi|21228377|ref|NP_634299.1| - 4.1e-35 119.9 0.2 7.2e-14 51.8 0.0 4.8 4 0 0 4 4 4 4 PAS fold PAS_4 PF08448.10 gi|21228377|ref|NP_634299.1| - 1.4e-31 109.0 0.0 5.8e-14 52.3 0.0 4.2 4 0 0 4 4 4 2 PAS fold HisKA_2 PF07568.12 gi|21228377|ref|NP_634299.1| - 1.2e-28 99.0 1.7 1.2e-28 99.0 1.7 2.7 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.7 gi|21228377|ref|NP_634299.1| - 2.2e-21 76.1 0.0 7.5e-07 29.4 0.0 4.4 4 0 0 4 4 4 3 PAS domain PAS_8 PF13188.7 gi|21228377|ref|NP_634299.1| - 5.8e-15 54.9 0.0 0.00035 20.5 0.0 3.9 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 gi|21228377|ref|NP_634299.1| - 6.2e-15 55.2 0.1 1.4e-05 25.0 0.0 4.6 5 1 0 5 5 5 3 PAS fold HATPase_c PF02518.26 gi|21228377|ref|NP_634299.1| - 2.1e-05 25.0 0.0 0.00012 22.6 0.0 2.3 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|21228377|ref|NP_634299.1| - 0.0001 23.0 1.3 0.087 13.5 0.2 2.9 2 0 0 2 2 2 2 HWE histidine kinase HATPase_c_2 PF13581.6 gi|21228377|ref|NP_634299.1| - 0.0049 16.8 0.0 0.012 15.6 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain 2-oxogl_dehyd_N PF16078.5 gi|21228377|ref|NP_634299.1| - 0.12 11.9 0.3 0.29 10.8 0.3 1.5 1 0 0 1 1 1 0 2-oxoglutarate dehydrogenase N-terminus Atg14 PF10186.9 gi|21228377|ref|NP_634299.1| - 4.6 6.2 7.2 2.7 7.0 0.0 3.0 3 0 0 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 PAS_3 PF08447.12 gi|21228378|ref|NP_634300.1| - 2.7e-52 175.0 0.6 1.6e-16 60.3 0.1 6.1 6 0 0 6 6 6 4 PAS fold MEDS PF14417.6 gi|21228378|ref|NP_634300.1| - 1.1e-42 145.6 0.0 3e-42 144.2 0.0 1.8 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_4 PF08448.10 gi|21228378|ref|NP_634300.1| - 7.1e-42 142.1 0.0 8.1e-16 58.3 0.0 4.9 5 0 0 5 5 5 4 PAS fold PAS_9 PF13426.7 gi|21228378|ref|NP_634300.1| - 6.6e-41 138.8 0.2 7.1e-15 55.1 0.0 5.8 5 0 0 5 5 5 5 PAS domain PAS PF00989.25 gi|21228378|ref|NP_634300.1| - 1.1e-36 125.3 0.1 3.8e-15 55.9 0.0 5.6 5 0 0 5 5 5 4 PAS fold HisKA_2 PF07568.12 gi|21228378|ref|NP_634300.1| - 6.6e-29 99.8 1.6 2.9e-28 97.8 1.6 2.2 1 0 0 1 1 1 1 Histidine kinase PAS_8 PF13188.7 gi|21228378|ref|NP_634300.1| - 4e-19 68.2 0.0 4.5e-09 36.1 0.0 4.3 4 0 0 4 4 3 2 PAS domain HATPase_c PF02518.26 gi|21228378|ref|NP_634300.1| - 2.3e-07 31.3 0.2 7.1e-07 29.7 0.2 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.6 gi|21228378|ref|NP_634300.1| - 1.7e-06 28.5 0.0 1.1 9.9 0.0 5.0 5 0 0 5 5 5 1 PAS domain PAS_7 PF12860.7 gi|21228378|ref|NP_634300.1| - 0.0001 22.5 0.2 2.9 8.1 0.0 5.0 5 1 0 5 5 4 1 PAS fold PAS_11 PF14598.6 gi|21228378|ref|NP_634300.1| - 0.00042 20.4 0.1 1.4 9.1 0.0 4.1 5 0 0 5 5 4 1 PAS domain HWE_HK PF07536.14 gi|21228378|ref|NP_634300.1| - 0.012 16.3 0.1 0.042 14.6 0.1 2.0 1 0 0 1 1 1 0 HWE histidine kinase HATPase_c_2 PF13581.6 gi|21228378|ref|NP_634300.1| - 0.13 12.3 0.0 0.31 11.0 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Osmo_CC PF08946.10 gi|21228378|ref|NP_634300.1| - 0.13 12.5 1.8 14 6.0 0.4 3.0 2 0 0 2 2 2 0 Osmosensory transporter coiled coil DUF45 PF01863.17 gi|21228378|ref|NP_634300.1| - 5.9 6.9 10.0 1.1 9.2 3.9 2.8 3 0 0 3 3 3 0 Protein of unknown function DUF45 PAS_3 PF08447.12 gi|21228379|ref|NP_634301.1| - 1.4e-69 230.4 0.4 3.3e-19 68.9 0.1 7.1 7 0 0 7 7 6 4 PAS fold PAS_9 PF13426.7 gi|21228379|ref|NP_634301.1| - 1.3e-36 125.0 8.3 7.4e-11 42.2 0.0 7.7 7 0 0 7 7 7 5 PAS domain MEDS PF14417.6 gi|21228379|ref|NP_634301.1| - 2.6e-32 111.9 0.0 6.7e-32 110.6 0.0 1.8 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_4 PF08448.10 gi|21228379|ref|NP_634301.1| - 3.4e-32 111.0 0.0 3.1e-07 30.6 0.0 7.0 6 1 0 6 6 6 6 PAS fold HisKA_2 PF07568.12 gi|21228379|ref|NP_634301.1| - 5.7e-29 100.0 4.7 6.2e-29 99.9 0.6 3.1 3 0 0 3 3 2 1 Histidine kinase PAS PF00989.25 gi|21228379|ref|NP_634301.1| - 2.8e-25 88.5 0.2 4.2e-06 26.7 0.0 6.6 6 0 0 6 6 6 4 PAS fold PAS_8 PF13188.7 gi|21228379|ref|NP_634301.1| - 1.8e-12 47.0 0.0 0.00017 21.5 0.0 5.4 6 0 0 6 6 6 2 PAS domain HATPase_c PF02518.26 gi|21228379|ref|NP_634301.1| - 1.1e-08 35.6 0.2 6e-08 33.2 0.0 2.3 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LeuA_dimer PF08502.10 gi|21228379|ref|NP_634301.1| - 0.0092 15.9 0.1 0.18 11.7 0.0 2.4 2 0 0 2 2 2 1 LeuA allosteric (dimerisation) domain HWE_HK PF07536.14 gi|21228379|ref|NP_634301.1| - 0.021 15.5 0.1 0.021 15.5 0.1 2.7 3 0 0 3 3 3 0 HWE histidine kinase HAS-barrel PF09378.10 gi|21228379|ref|NP_634301.1| - 0.27 11.4 1.6 6 7.1 0.1 3.1 2 0 0 2 2 2 0 HAS barrel domain PAS_7 PF12860.7 gi|21228379|ref|NP_634301.1| - 0.89 9.7 7.1 1.3e+02 2.8 0.0 5.8 6 1 0 6 6 6 0 PAS fold DUF5344 PF17279.2 gi|21228379|ref|NP_634301.1| - 1.2 9.8 15.0 0.33 11.6 0.1 4.2 4 0 0 4 4 4 0 Family of unknown function (DUF5344) DUF2959 PF11172.8 gi|21228379|ref|NP_634301.1| - 1.4 9.1 9.2 3.1 7.9 0.5 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2959) AdoHcyase PF05221.17 gi|21228380|ref|NP_634302.1| - 1.3e-57 195.3 0.0 7.8e-29 100.8 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|21228380|ref|NP_634302.1| - 4.3e-51 173.2 1.3 8.5e-51 172.2 1.3 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|21228380|ref|NP_634302.1| - 1.8e-09 37.2 0.2 3.2e-09 36.4 0.2 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|21228380|ref|NP_634302.1| - 8e-06 25.5 0.1 1.5e-05 24.6 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_C PF07479.14 gi|21228380|ref|NP_634302.1| - 0.022 15.0 1.5 0.034 14.4 0.6 1.8 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amidohydro_1 PF01979.20 gi|21228381|ref|NP_634303.1| - 7.8e-76 255.6 0.7 9.8e-76 255.3 0.7 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|21228381|ref|NP_634303.1| - 1.6e-23 83.9 3.6 9.4e-17 61.6 0.0 2.4 3 0 0 3 3 3 2 Amidohydrolase family A_deaminase PF00962.22 gi|21228381|ref|NP_634303.1| - 1e-05 25.1 0.0 1.7e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Adenosine/AMP deaminase Urease_alpha PF00449.20 gi|21228381|ref|NP_634303.1| - 0.076 13.4 1.4 0.17 12.3 1.4 1.5 1 0 0 1 1 1 0 Urease alpha-subunit, N-terminal domain HD PF01966.22 gi|21228382|ref|NP_634304.1| - 3.7e-13 49.8 0.8 6.1e-13 49.1 0.8 1.3 1 0 0 1 1 1 1 HD domain PPS_PS PF02006.16 gi|21228383|ref|NP_634305.1| - 4.6e-76 254.3 2.5 5.7e-76 254.0 2.5 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase TMF_TATA_bd PF12325.8 gi|21228383|ref|NP_634305.1| - 0.046 14.0 1.0 0.1 12.8 1.0 1.6 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding GHMP_kinases_N PF00288.26 gi|21228384|ref|NP_634306.1| - 3.7e-09 36.7 3.0 3.7e-09 36.7 3.0 2.0 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|21228384|ref|NP_634306.1| - 5.3e-05 23.5 0.1 0.00082 19.7 0.0 2.4 2 0 0 2 2 2 1 GHMP kinases C terminal DUF4982 PF16355.5 gi|21228384|ref|NP_634306.1| - 0.095 12.6 0.2 0.22 11.5 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4982) DFP PF04127.15 gi|21228385|ref|NP_634307.1| - 1.5e-47 161.9 0.0 1.1e-46 159.1 0.0 2.0 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|21228385|ref|NP_634307.1| - 1.8e-38 131.8 0.2 3e-38 131.1 0.2 1.4 1 0 0 1 1 1 1 Flavoprotein NAD_binding_10 PF13460.6 gi|21228385|ref|NP_634307.1| - 0.0046 16.9 0.1 0.012 15.5 0.0 1.7 2 0 0 2 2 2 1 NAD(P)H-binding Glyco_transf_4 PF13439.6 gi|21228385|ref|NP_634307.1| - 0.14 12.2 0.1 1.2 9.1 0.0 2.2 2 0 0 2 2 2 0 Glycosyltransferase Family 4 acVLRF1 PF18859.1 gi|21228388|ref|NP_634310.1| - 1.4e-17 64.2 0.0 3.1e-17 63.1 0.0 1.6 2 0 0 2 2 2 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|21228388|ref|NP_634310.1| - 2.3e-10 40.8 0.4 4e-10 40.1 0.0 1.6 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_2 PF03464.15 gi|21228388|ref|NP_634310.1| - 3e-09 37.3 0.5 4.4e-09 36.8 0.0 1.5 2 0 0 2 2 2 1 eRF1 domain 2 baeRF_family2 PF18844.1 gi|21228388|ref|NP_634310.1| - 4.6e-05 23.5 0.5 0.00056 20.0 0.0 2.3 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 2 NCBP3 PF10309.9 gi|21228388|ref|NP_634310.1| - 0.043 13.7 0.0 0.11 12.3 0.0 1.7 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 Pup PF05639.11 gi|21228388|ref|NP_634310.1| - 5.1 8.1 9.0 0.65 11.0 1.2 2.8 2 1 0 2 2 2 0 Pup-like protein DUF1275 PF06912.11 gi|21228389|ref|NP_634311.1| - 2.6e-47 161.3 18.9 3e-47 161.0 18.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) MFS_1 PF07690.16 gi|21228389|ref|NP_634311.1| - 0.00011 21.3 0.1 0.00011 21.3 0.1 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily RseC_MucC PF04246.12 gi|21228389|ref|NP_634311.1| - 0.12 12.3 5.7 0.059 13.3 1.3 2.4 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC SLATT_4 PF18186.1 gi|21228389|ref|NP_634311.1| - 0.87 9.2 4.6 0.59 9.8 2.7 1.7 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 4 DUF3397 PF11877.8 gi|21228389|ref|NP_634311.1| - 3.4 7.9 8.4 3.3 7.9 3.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3397) FtsJ PF01728.19 gi|21228390|ref|NP_634312.1| - 1.2e-57 194.8 0.0 2e-57 194.2 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase TRAM PF01938.20 gi|21228390|ref|NP_634312.1| - 1.5e-08 34.5 1.2 2.6e-08 33.7 1.2 1.4 1 0 0 1 1 1 1 TRAM domain Methyltransf_23 PF13489.6 gi|21228390|ref|NP_634312.1| - 0.00071 19.5 0.0 0.0049 16.7 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21228390|ref|NP_634312.1| - 0.0036 17.1 0.0 0.091 12.6 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228390|ref|NP_634312.1| - 0.047 14.4 0.2 0.97 10.2 0.1 2.5 1 1 1 2 2 2 0 Methyltransferase domain PHP PF02811.19 gi|21228391|ref|NP_634313.1| - 4.9e-10 40.0 0.1 8.3e-10 39.2 0.1 1.7 1 1 0 1 1 1 1 PHP domain RNase_P_p30 PF01876.16 gi|21228391|ref|NP_634313.1| - 8.4e-05 22.1 0.0 0.00033 20.2 0.0 1.9 1 1 0 1 1 1 1 RNase P subunit p30 ATPgrasp_N PF18130.1 gi|21228391|ref|NP_634313.1| - 0.038 14.5 0.7 0.14 12.8 0.1 2.2 3 0 0 3 3 3 0 ATP-grasp N-terminal domain Amidase_3 PF01520.18 gi|21228392|ref|NP_634314.1| - 9e-41 139.9 0.0 1.6e-40 139.1 0.0 1.4 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase MG2 PF01835.19 gi|21228392|ref|NP_634314.1| - 0.0042 17.5 0.1 0.012 16.1 0.1 1.7 1 0 0 1 1 1 1 MG2 domain Y_Y_Y PF07495.13 gi|21228392|ref|NP_634314.1| - 0.021 14.8 0.3 0.16 11.9 0.0 2.4 2 0 0 2 2 2 0 Y_Y_Y domain DUF45 PF01863.17 gi|21228393|ref|NP_634315.1| - 3.3e-59 200.4 2.9 3.8e-59 200.2 2.9 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF45 SprT-like PF10263.9 gi|21228393|ref|NP_634315.1| - 4.9e-07 29.6 0.1 9.1e-07 28.7 0.1 1.5 1 0 0 1 1 1 1 SprT-like family WLM PF08325.10 gi|21228393|ref|NP_634315.1| - 0.0072 16.4 0.3 0.012 15.7 0.3 1.3 1 0 0 1 1 1 1 WLM domain SWI2_SNF2 PF18766.1 gi|21228394|ref|NP_634316.1| - 1e-73 247.7 0.2 2.2e-73 246.7 0.2 1.6 1 0 0 1 1 1 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|21228394|ref|NP_634316.1| - 1.8e-34 119.4 0.8 6e-34 117.7 0.8 1.9 1 0 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|21228394|ref|NP_634316.1| - 8.4e-21 74.7 0.2 1.5e-19 70.6 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DUF3387 PF11867.8 gi|21228394|ref|NP_634316.1| - 0.00019 20.9 4.5 0.00036 20.0 4.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3387) DEAD PF00270.29 gi|21228394|ref|NP_634316.1| - 0.005 16.6 0.0 0.012 15.4 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase APG17 PF04108.12 gi|21228394|ref|NP_634316.1| - 2.4 7.2 7.0 4.8 6.2 1.1 2.4 2 0 0 2 2 2 0 Autophagy protein Apg17 DUF87 PF01935.17 gi|21228394|ref|NP_634316.1| - 7.7 6.5 8.1 4.5 7.3 0.0 3.9 5 0 0 5 5 5 0 Helicase HerA, central domain Methylase_S PF01420.19 gi|21228395|ref|NP_634317.1| - 1.2e-34 119.9 0.0 2e-20 73.7 0.0 2.3 2 1 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.16 gi|21228396|ref|NP_634318.1| - 3.2e-100 335.4 0.0 4.9e-100 334.8 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|21228396|ref|NP_634318.1| - 9.8e-15 55.4 2.7 3.8e-13 50.2 0.0 4.2 3 1 0 3 3 3 1 HsdM N-terminal domain MTS PF05175.14 gi|21228396|ref|NP_634318.1| - 0.00019 21.0 0.0 0.00038 20.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|21228396|ref|NP_634318.1| - 0.0043 16.9 0.0 0.066 13.0 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain UPF0020 PF01170.18 gi|21228396|ref|NP_634318.1| - 0.005 16.5 0.1 0.072 12.8 0.1 2.3 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Eco57I PF07669.11 gi|21228396|ref|NP_634318.1| - 0.013 16.0 0.0 0.24 11.9 0.0 3.1 3 1 0 3 3 3 0 Eco57I restriction-modification methylase AviRa PF11599.8 gi|21228396|ref|NP_634318.1| - 0.036 13.5 1.3 0.044 13.2 0.0 1.7 2 0 0 2 2 2 0 RRNA methyltransferase AviRa Matrilin_ccoil PF10393.9 gi|21228396|ref|NP_634318.1| - 0.83 9.6 3.7 5 7.1 1.0 2.7 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin NosD PF05048.13 gi|21228397|ref|NP_634319.1| - 8.3e-45 152.9 23.1 8.3e-45 152.9 23.1 2.2 2 1 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|21228397|ref|NP_634319.1| - 1.2e-16 60.3 14.6 7e-11 41.8 3.1 3.1 3 0 0 3 3 3 2 PKD domain PGF-CTERM PF18204.1 gi|21228397|ref|NP_634319.1| - 0.00013 21.8 2.5 0.00013 21.8 2.5 1.8 2 0 0 2 2 2 1 PGF-CTERM motif Pectinesterase PF01095.19 gi|21228397|ref|NP_634319.1| - 0.00062 18.6 0.2 0.0011 17.7 0.2 1.3 1 0 0 1 1 1 1 Pectinesterase DUF5050 PF16472.5 gi|21228398|ref|NP_634320.1| - 6.5e-12 45.3 22.3 4.9e-08 32.6 11.0 2.8 1 1 1 3 3 3 2 Domain of unknown function (DUF5050) Kelch_4 PF13418.6 gi|21228398|ref|NP_634320.1| - 1.2e-06 28.4 2.5 10 6.3 0.0 6.0 6 0 0 6 6 6 3 Galactose oxidase, central domain DPPIV_N PF00930.21 gi|21228398|ref|NP_634320.1| - 2.6e-05 23.1 10.5 0.0078 15.0 0.2 4.7 3 2 2 5 5 5 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region Kelch_3 PF13415.6 gi|21228398|ref|NP_634320.1| - 0.00056 20.1 7.8 11 6.4 0.1 5.3 4 1 1 5 5 5 2 Galactose oxidase, central domain PQQ PF01011.21 gi|21228398|ref|NP_634320.1| - 0.039 13.9 8.2 7.3 6.7 0.1 4.7 5 0 0 5 5 5 0 PQQ enzyme repeat DUF5074 PF16819.5 gi|21228398|ref|NP_634320.1| - 0.37 10.9 13.7 0.58 10.2 1.5 3.8 1 1 3 4 4 4 0 Domain of unknown function (DUF5074) Myco_arth_vir_N PF09610.10 gi|21228399|ref|NP_634321.1| - 0.03 14.4 2.7 0.072 13.2 0.2 2.7 2 0 0 2 2 2 0 Mycoplasma virulence signal region (Myco_arth_vir_N) HTH_1 PF00126.27 gi|21228399|ref|NP_634321.1| - 0.039 13.9 0.0 0.18 11.8 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF2207 PF09972.9 gi|21228399|ref|NP_634321.1| - 5.6 5.6 6.8 33 3.1 0.8 3.2 3 1 0 3 3 3 0 Predicted membrane protein (DUF2207) T2SSE PF00437.20 gi|21228400|ref|NP_634322.1| - 3.2e-31 108.4 0.0 8.2e-31 107.1 0.0 1.6 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_7 PF12775.7 gi|21228400|ref|NP_634322.1| - 0.0015 18.1 0.0 0.0028 17.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 gi|21228400|ref|NP_634322.1| - 0.0084 16.5 0.0 0.026 14.9 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|21228400|ref|NP_634322.1| - 0.022 15.0 0.1 0.32 11.3 0.0 2.7 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|21228400|ref|NP_634322.1| - 0.045 13.0 0.0 0.11 11.7 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin DEAD PF00270.29 gi|21228400|ref|NP_634322.1| - 0.046 13.5 0.0 0.087 12.6 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase ABC_tran PF00005.27 gi|21228400|ref|NP_634322.1| - 0.071 13.6 0.0 0.19 12.3 0.0 1.7 1 0 0 1 1 1 0 ABC transporter cobW PF02492.19 gi|21228400|ref|NP_634322.1| - 0.077 12.6 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain DUF2117 PF09890.9 gi|21228401|ref|NP_634323.1| - 2.2e-70 236.4 0.1 2.8e-70 236.1 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) NAD_kinase PF01513.21 gi|21228401|ref|NP_634323.1| - 0.0099 15.1 0.1 0.017 14.4 0.1 1.3 1 0 0 1 1 1 1 ATP-NAD kinase Lactamase_B_3 PF13483.6 gi|21228402|ref|NP_634324.1| - 1e-27 97.0 0.0 1.5e-27 96.5 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|21228402|ref|NP_634324.1| - 8.9e-21 74.3 0.0 1.2e-20 73.9 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|21228402|ref|NP_634324.1| - 2.1e-07 31.1 0.9 6.1e-07 29.6 0.9 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Prismane PF03063.20 gi|21228403|ref|NP_634325.1| - 3.4e-127 425.2 0.0 4e-127 425.0 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Lar_N PF09861.9 gi|21228404|ref|NP_634326.1| - 6.6e-67 224.6 0.0 1.2e-66 223.8 0.0 1.4 1 0 0 1 1 1 1 Lactate racemase N-terminal domain DUF362 PF04015.12 gi|21228404|ref|NP_634326.1| - 2.3e-05 24.7 0.0 4e-05 24.0 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Lar_N PF09861.9 gi|21228405|ref|NP_634327.1| - 6.5e-72 241.0 0.3 1.1e-71 240.3 0.0 1.5 2 0 0 2 2 2 1 Lactate racemase N-terminal domain DUF362 PF04015.12 gi|21228405|ref|NP_634327.1| - 0.0039 17.5 0.0 0.0083 16.4 0.0 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Methyltransf_2 PF00891.18 gi|21228405|ref|NP_634327.1| - 0.074 12.3 0.0 0.16 11.2 0.0 1.5 1 0 0 1 1 1 0 O-methyltransferase domain Y1_Tnp PF01797.16 gi|21228406|ref|NP_634328.1| - 1.1e-35 122.3 1.5 1.4e-35 122.0 1.5 1.1 1 0 0 1 1 1 1 Transposase IS200 like SSF PF00474.17 gi|21228407|ref|NP_634329.1| - 1.4e-56 192.1 42.4 2.4e-56 191.4 42.4 1.4 1 0 0 1 1 1 1 Sodium:solute symporter family Asparaginase PF00710.20 gi|21228408|ref|NP_634330.1| - 2.4e-60 203.4 1.6 4e-60 202.6 0.8 1.7 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|21228408|ref|NP_634330.1| - 5.4e-30 103.9 0.1 7.4e-29 100.3 0.0 2.2 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|21228408|ref|NP_634330.1| - 3.9e-17 61.3 0.3 7.4e-17 60.4 0.3 1.5 1 0 0 1 1 1 1 GatD N-terminal domain zf-primase PF09329.11 gi|21228408|ref|NP_634330.1| - 0.12 12.2 0.1 0.25 11.2 0.1 1.4 1 0 0 1 1 1 0 Primase zinc finger Lyase_1 PF00206.20 gi|21228409|ref|NP_634331.1| - 1e-62 212.3 0.0 1.5e-62 211.8 0.0 1.3 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|21228409|ref|NP_634331.1| - 4.7e-15 56.1 0.1 2.5e-14 53.8 0.0 2.4 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal Tsc35 PF15079.6 gi|21228409|ref|NP_634331.1| - 0.1 12.1 0.1 0.31 10.6 0.1 1.8 1 0 0 1 1 1 0 Testis-specific protein 35 Methyltransf_11 PF08241.12 gi|21228410|ref|NP_634332.1| - 3.1e-25 88.6 0.0 5.3e-25 87.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21228410|ref|NP_634332.1| - 2.6e-22 79.4 0.0 3.1e-22 79.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228410|ref|NP_634332.1| - 3.5e-21 75.7 0.0 5.9e-21 75.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21228410|ref|NP_634332.1| - 5e-18 65.4 0.0 6.4e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21228410|ref|NP_634332.1| - 1.7e-17 63.6 0.0 3.4e-17 62.6 0.0 1.5 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|21228410|ref|NP_634332.1| - 5.6e-17 62.3 0.0 9.3e-17 61.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|21228410|ref|NP_634332.1| - 1e-06 28.5 0.0 1.5e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TehB PF03848.14 gi|21228410|ref|NP_634332.1| - 2.4e-05 23.8 0.0 4e-05 23.1 0.0 1.3 1 1 0 1 1 1 1 Tellurite resistance protein TehB NodS PF05401.11 gi|21228410|ref|NP_634332.1| - 0.00021 21.0 0.0 0.0003 20.5 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 gi|21228410|ref|NP_634332.1| - 0.00085 18.3 0.0 0.0012 17.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_4 PF02390.17 gi|21228410|ref|NP_634332.1| - 0.037 13.5 0.0 0.083 12.4 0.0 1.6 1 1 0 1 1 1 0 Putative methyltransferase Methyltransf_17 PF12692.7 gi|21228410|ref|NP_634332.1| - 0.16 12.0 0.0 0.33 10.9 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase PCMT PF01135.19 gi|21228410|ref|NP_634332.1| - 0.21 11.3 0.0 0.4 10.4 0.0 1.5 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Gate PF07670.14 gi|21228411|ref|NP_634333.1| - 6e-13 49.1 13.1 2.1e-06 28.0 0.7 2.7 2 1 1 3 3 3 2 Nucleoside recognition MogR_DNAbind PF12181.8 gi|21228411|ref|NP_634333.1| - 0.09 12.7 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) SHOCT PF09851.9 gi|21228411|ref|NP_634333.1| - 0.095 12.5 0.4 0.23 11.2 0.2 1.8 2 0 0 2 2 2 0 Short C-terminal domain ABC1 PF03109.16 gi|21228412|ref|NP_634334.1| - 2.8e-27 95.2 0.0 7.4e-27 93.9 0.0 1.7 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.22 gi|21228412|ref|NP_634334.1| - 1.1e-07 31.6 0.0 2.4e-07 30.5 0.0 1.7 1 1 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|21228412|ref|NP_634334.1| - 3.9e-05 23.1 0.0 0.0013 18.2 0.0 2.3 2 0 0 2 2 2 1 Protein kinase domain APH PF01636.23 gi|21228412|ref|NP_634334.1| - 0.01 15.8 0.3 0.028 14.3 0.3 1.7 1 0 0 1 1 1 0 Phosphotransferase enzyme family TPP_enzyme_C PF02775.21 gi|21228412|ref|NP_634334.1| - 0.08 12.7 0.0 1.6 8.5 0.0 2.5 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HMA PF00403.26 gi|21228413|ref|NP_634335.1| - 5.6e-06 26.7 0.0 5.8e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain Ni_hydr_CYTB PF01292.20 gi|21228414|ref|NP_634336.1| - 0.00045 19.9 20.4 0.0011 18.6 20.4 1.7 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 gi|21228414|ref|NP_634336.1| - 0.00093 19.7 20.7 0.042 14.4 8.4 2.7 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) DUF4134 PF13572.6 gi|21228414|ref|NP_634336.1| - 0.32 11.3 2.4 0.48 10.7 0.8 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4134) NiFeSe_Hases PF00374.19 gi|21228415|ref|NP_634337.1| - 1.7e-82 277.9 0.0 4.5e-53 180.9 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase NLRC4_HD PF17889.1 gi|21228415|ref|NP_634337.1| - 0.033 14.5 0.0 0.064 13.6 0.0 1.4 1 0 0 1 1 1 0 NLRC4 helical domain Oxidored_q6 PF01058.22 gi|21228416|ref|NP_634338.1| - 8.9e-33 112.9 2.3 1.5e-32 112.1 0.1 2.1 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.6 gi|21228416|ref|NP_634338.1| - 4.8e-29 100.6 5.9 8.2e-28 96.6 2.8 2.6 2 0 0 2 2 2 1 NiFe/NiFeSe hydrogenase small subunit C-terminal TAT_signal PF10518.9 gi|21228416|ref|NP_634338.1| - 0.0013 18.5 0.3 0.0013 18.5 0.3 2.9 3 0 0 3 3 3 1 TAT (twin-arginine translocation) pathway signal sequence HupF_HypC PF01455.18 gi|21228417|ref|NP_634339.1| - 4.4e-20 71.6 0.8 5.5e-20 71.3 0.8 1.1 1 0 0 1 1 1 1 HupF/HypC family HypD PF01924.16 gi|21228418|ref|NP_634340.1| - 8.7e-136 452.6 0.0 1.1e-135 452.3 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family HypA PF01155.19 gi|21228419|ref|NP_634341.1| - 2.7e-28 98.2 2.2 3.2e-28 98.0 2.2 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RbpA PF13397.6 gi|21228419|ref|NP_634341.1| - 0.096 13.3 0.1 3.5 8.3 0.0 2.2 1 1 1 2 2 2 0 RNA polymerase-binding protein cobW PF02492.19 gi|21228420|ref|NP_634342.1| - 1.1e-25 90.3 1.1 1.3e-25 90.0 1.1 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|21228420|ref|NP_634342.1| - 2.8e-06 26.5 1.8 0.016 14.2 0.5 2.1 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|21228420|ref|NP_634342.1| - 0.0015 18.9 0.0 0.002 18.5 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain MobB PF03205.14 gi|21228420|ref|NP_634342.1| - 0.002 18.0 0.0 0.0053 16.7 0.0 1.7 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 gi|21228420|ref|NP_634342.1| - 0.0029 17.6 0.0 0.0035 17.3 0.0 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_18 PF13238.6 gi|21228420|ref|NP_634342.1| - 0.0058 17.2 0.1 0.011 16.3 0.1 1.5 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 gi|21228420|ref|NP_634342.1| - 0.007 16.2 0.1 0.015 15.1 0.0 1.5 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein NTPase_1 PF03266.15 gi|21228420|ref|NP_634342.1| - 0.0095 15.9 0.3 0.041 13.8 0.2 2.1 1 1 0 1 1 1 1 NTPase NB-ARC PF00931.22 gi|21228420|ref|NP_634342.1| - 0.012 14.8 0.1 0.019 14.2 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_17 PF13207.6 gi|21228420|ref|NP_634342.1| - 0.012 16.0 0.1 0.068 13.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|21228420|ref|NP_634342.1| - 0.012 15.2 0.0 0.019 14.6 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain TsaE PF02367.17 gi|21228420|ref|NP_634342.1| - 0.023 14.7 0.0 0.042 13.8 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_22 PF13401.6 gi|21228420|ref|NP_634342.1| - 0.026 14.8 0.0 0.063 13.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|21228420|ref|NP_634342.1| - 0.027 14.2 0.0 0.037 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|21228420|ref|NP_634342.1| - 0.035 13.4 0.0 0.049 12.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin T2SSE PF00437.20 gi|21228420|ref|NP_634342.1| - 0.036 13.1 0.0 0.056 12.5 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_19 PF13245.6 gi|21228420|ref|NP_634342.1| - 0.036 14.4 0.0 0.048 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|21228420|ref|NP_634342.1| - 0.056 13.2 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 gi|21228420|ref|NP_634342.1| - 0.057 13.5 0.0 0.094 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain Pox_A32 PF04665.12 gi|21228420|ref|NP_634342.1| - 0.059 12.8 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_33 PF13671.6 gi|21228420|ref|NP_634342.1| - 0.059 13.5 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 gi|21228420|ref|NP_634342.1| - 0.065 12.8 0.2 0.51 9.8 0.0 2.1 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain KAP_NTPase PF07693.14 gi|21228420|ref|NP_634342.1| - 0.067 12.4 0.0 0.067 12.4 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain AAA_7 PF12775.7 gi|21228420|ref|NP_634342.1| - 0.15 11.6 0.0 0.28 10.7 0.0 1.5 2 0 0 2 2 2 0 P-loop containing dynein motor region AIRS_C PF02769.22 gi|21228421|ref|NP_634343.1| - 1e-30 107.0 0.1 1.3e-30 106.6 0.1 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|21228421|ref|NP_634343.1| - 3e-18 66.3 0.2 6.4e-18 65.2 0.2 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain ABC_sub_bind PF04392.12 gi|21228421|ref|NP_634343.1| - 0.052 12.8 0.0 0.088 12.0 0.0 1.3 1 0 0 1 1 1 0 ABC transporter substrate binding protein Proton_antipo_M PF00361.20 gi|21228422|ref|NP_634344.1| - 1.6e-49 168.7 26.0 1.6e-49 168.7 26.0 2.7 2 1 0 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|21228422|ref|NP_634344.1| - 2.1e-08 34.1 0.6 2.1e-08 34.1 0.6 3.0 2 1 1 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FtsH_ext PF06480.15 gi|21228422|ref|NP_634344.1| - 8.4 6.8 7.5 6.6 7.1 0.5 3.9 3 1 0 3 3 3 0 FtsH Extracellular NADHdh PF00146.21 gi|21228423|ref|NP_634345.1| - 2.5e-44 151.8 23.6 3.2e-44 151.4 23.6 1.1 1 0 0 1 1 1 1 NADH dehydrogenase Oxidored_q6 PF01058.22 gi|21228424|ref|NP_634346.1| - 1.6e-25 89.5 3.5 1.9e-25 89.2 3.5 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.19 gi|21228425|ref|NP_634347.1| - 4.9e-08 33.6 0.0 5.2e-08 33.5 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YflT PF11181.8 gi|21228425|ref|NP_634347.1| - 0.095 13.2 0.1 0.15 12.6 0.1 1.4 1 1 0 1 1 1 0 Heat induced stress protein YflT Complex1_49kDa PF00346.19 gi|21228426|ref|NP_634348.1| - 1.2e-62 211.5 0.1 6.5e-46 156.6 0.1 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|21228426|ref|NP_634348.1| - 2.9e-15 56.1 2.0 1.5e-14 53.9 0.0 2.6 3 0 0 3 3 3 1 Nickel-dependent hydrogenase Fer4_7 PF12838.7 gi|21228427|ref|NP_634349.1| - 1.9e-12 47.6 35.2 2.8e-07 31.0 14.1 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21228427|ref|NP_634349.1| - 1.9e-11 43.9 23.2 5.6e-09 36.0 12.1 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21228427|ref|NP_634349.1| - 3.9e-11 42.3 15.6 1.1e-07 31.4 4.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21228427|ref|NP_634349.1| - 2.2e-08 34.1 13.5 3.3e-08 33.6 13.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21228427|ref|NP_634349.1| - 6.2e-07 29.2 16.7 0.0001 22.2 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21228427|ref|NP_634349.1| - 7.4e-07 28.9 11.2 0.00014 21.7 2.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21228427|ref|NP_634349.1| - 9.6e-07 28.8 13.5 1.5e-06 28.2 13.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21228427|ref|NP_634349.1| - 1.5e-06 28.6 9.6 0.0012 19.4 0.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21228427|ref|NP_634349.1| - 1.1e-05 26.2 12.1 0.0045 17.9 1.4 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|21228427|ref|NP_634349.1| - 0.00035 20.9 15.2 0.095 13.2 15.3 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|21228427|ref|NP_634349.1| - 0.0026 17.9 0.4 0.0026 17.9 0.4 2.1 1 1 1 2 2 2 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_3 PF12798.7 gi|21228427|ref|NP_634349.1| - 0.0026 18.6 20.5 0.04 14.9 3.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21228427|ref|NP_634349.1| - 0.0047 17.7 6.0 1.4 9.8 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21228427|ref|NP_634349.1| - 0.0072 16.8 13.2 0.12 12.9 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|21228427|ref|NP_634349.1| - 0.08 13.5 11.0 1.2 9.7 2.1 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|21228427|ref|NP_634349.1| - 0.6 10.3 10.9 1.5 9.1 10.9 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21228427|ref|NP_634349.1| - 0.92 10.3 14.1 0.4 11.4 1.7 2.7 2 2 0 2 2 2 0 4Fe-4S single cluster domain HMA PF00403.26 gi|21228428|ref|NP_634350.1| - 2.4e-21 75.9 5.0 2.8e-21 75.7 5.0 1.1 1 0 0 1 1 1 1 Heavy-metal-associated domain TusA PF01206.17 gi|21228428|ref|NP_634350.1| - 0.00015 21.5 0.1 0.00062 19.5 0.1 1.8 1 1 0 1 1 1 1 Sulfurtransferase TusA RRM_3 PF08777.11 gi|21228428|ref|NP_634350.1| - 0.0081 16.2 0.4 0.0096 16.0 0.4 1.1 1 0 0 1 1 1 1 RNA binding motif DUF2674 PF10879.8 gi|21228428|ref|NP_634350.1| - 0.024 14.2 0.2 0.047 13.2 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2674) UPF0270 PF06794.12 gi|21228428|ref|NP_634350.1| - 0.033 14.3 0.6 0.045 13.8 0.6 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0270) Spore_YhcN_YlaJ PF09580.10 gi|21228428|ref|NP_634350.1| - 0.097 12.8 3.2 0.11 12.6 3.2 1.1 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) YabP PF07873.11 gi|21228428|ref|NP_634350.1| - 0.27 11.0 1.9 5.3 6.9 0.2 2.5 1 1 1 3 3 3 0 YabP family HMA PF00403.26 gi|21228429|ref|NP_634351.1| - 4.6e-08 33.4 0.3 5.1e-08 33.2 0.3 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain E1-E2_ATPase PF00122.20 gi|21228430|ref|NP_634352.1| - 7.1e-56 188.6 1.6 7.1e-56 188.6 1.6 1.8 2 0 0 2 2 2 1 E1-E2 ATPase HMA PF00403.26 gi|21228430|ref|NP_634352.1| - 1.6e-49 166.2 0.7 1.6e-15 57.3 0.0 3.6 3 0 0 3 3 3 3 Heavy-metal-associated domain Hydrolase PF00702.26 gi|21228430|ref|NP_634352.1| - 1.4e-45 156.1 1.3 1.4e-45 156.1 1.3 2.1 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|21228430|ref|NP_634352.1| - 7.6e-06 25.9 2.5 0.0013 18.5 0.7 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Tox-PL-2 PF15643.6 gi|21228430|ref|NP_634352.1| - 0.0041 17.2 0.7 2 8.6 0.0 2.7 1 1 0 2 2 2 2 Papain fold toxin 2 Fer2_BFD PF04324.15 gi|21228430|ref|NP_634352.1| - 0.0066 16.8 6.6 0.53 10.7 0.1 4.4 4 0 0 4 4 4 1 BFD-like [2Fe-2S] binding domain HAD PF12710.7 gi|21228430|ref|NP_634352.1| - 0.087 13.2 0.0 0.33 11.3 0.0 1.9 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase SNAD4 PF18750.1 gi|21228430|ref|NP_634352.1| - 0.092 12.9 0.5 30 4.8 0.0 3.0 4 0 0 4 4 4 0 Secreted Novel AID/APOBEC-like Deaminase 4 DUF2070 PF09843.9 gi|21228431|ref|NP_634353.1| - 0.081 11.2 3.7 0.092 11.0 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) OAD_gamma PF04277.13 gi|21228431|ref|NP_634353.1| - 0.1 13.2 0.0 0.1 13.2 0.0 2.0 1 1 1 2 2 2 0 Oxaloacetate decarboxylase, gamma chain ALMT PF11744.8 gi|21228431|ref|NP_634353.1| - 0.6 8.9 2.8 0.99 8.2 2.8 1.4 1 1 0 1 1 1 0 Aluminium activated malate transporter DUF4534 PF15049.6 gi|21228431|ref|NP_634353.1| - 4.8 6.9 9.4 11 5.8 9.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4534) CRA PF06589.11 gi|21228431|ref|NP_634353.1| - 8 6.6 5.5 1.9 8.6 0.7 2.0 1 1 1 2 2 2 0 Circumsporozoite-related antigen (CRA) Baculo_11_kDa PF06143.11 gi|21228431|ref|NP_634353.1| - 8.5 6.0 8.5 8.6 6.0 0.3 2.1 1 1 1 2 2 2 0 Baculovirus 11 kDa family DUF2196 PF09962.9 gi|21228432|ref|NP_634354.1| - 1.1e-29 102.2 5.1 1.2e-29 102.1 5.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) MFS_1 PF07690.16 gi|21228433|ref|NP_634355.1| - 8.6e-56 189.4 45.1 4.4e-54 183.7 36.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|21228433|ref|NP_634355.1| - 1.3e-14 53.9 25.6 1.9e-14 53.3 25.6 1.2 1 0 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 gi|21228433|ref|NP_634355.1| - 0.0034 16.3 31.1 0.015 14.2 31.1 2.2 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.6 gi|21228433|ref|NP_634355.1| - 0.071 11.7 37.9 0.86 8.1 35.2 2.9 1 1 0 1 1 1 0 MFS/sugar transport protein Methyltransf_11 PF08241.12 gi|21228434|ref|NP_634356.1| - 2.5e-23 82.5 0.0 3.6e-23 82.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228434|ref|NP_634356.1| - 1.5e-21 76.9 0.0 2.6e-21 76.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21228434|ref|NP_634356.1| - 6.2e-20 71.5 0.0 8.8e-20 71.0 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21228434|ref|NP_634356.1| - 9.2e-19 67.9 0.0 1.1e-18 67.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21228434|ref|NP_634356.1| - 7.8e-15 54.8 0.0 9.4e-15 54.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|21228434|ref|NP_634356.1| - 3.1e-12 47.1 0.0 4.5e-12 46.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|21228434|ref|NP_634356.1| - 6.9e-09 35.4 0.0 1.1e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|21228434|ref|NP_634356.1| - 9.6e-08 31.8 0.0 1.4e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|21228434|ref|NP_634356.1| - 1.2e-06 28.3 0.0 1.8e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|21228434|ref|NP_634356.1| - 1.4e-06 28.0 0.0 1.7e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) N6_N4_Mtase PF01555.18 gi|21228434|ref|NP_634356.1| - 1.1e-05 25.2 0.1 0.00028 20.7 0.0 2.1 2 0 0 2 2 2 1 DNA methylase TPMT PF05724.11 gi|21228434|ref|NP_634356.1| - 1.8e-05 24.5 0.0 2.8e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_32 PF13679.6 gi|21228434|ref|NP_634356.1| - 0.00011 22.2 0.0 0.00014 21.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|21228434|ref|NP_634356.1| - 0.0014 18.0 0.0 0.0021 17.4 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_8 PF05148.15 gi|21228434|ref|NP_634356.1| - 0.0045 16.9 0.0 1.1 9.0 0.0 2.2 2 0 0 2 2 2 1 Hypothetical methyltransferase NodS PF05401.11 gi|21228434|ref|NP_634356.1| - 0.0055 16.3 0.0 0.0084 15.7 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_18 PF12847.7 gi|21228434|ref|NP_634356.1| - 0.0063 16.5 0.0 0.0098 15.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|21228434|ref|NP_634356.1| - 0.024 14.2 0.0 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 gi|21228434|ref|NP_634356.1| - 0.03 14.0 0.0 0.044 13.4 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 UPF0020 PF01170.18 gi|21228434|ref|NP_634356.1| - 0.041 13.6 0.1 0.35 10.5 0.1 2.0 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 CheR PF01739.18 gi|21228434|ref|NP_634356.1| - 0.061 12.8 0.1 2.5 7.5 0.0 2.4 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain Methyltransf_4 PF02390.17 gi|21228434|ref|NP_634356.1| - 0.068 12.6 0.0 0.2 11.1 0.0 1.8 1 1 0 1 1 1 0 Putative methyltransferase MethyltransfD12 PF02086.15 gi|21228434|ref|NP_634356.1| - 0.13 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase RrnaAD PF00398.20 gi|21228434|ref|NP_634356.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DOT1 PF08123.13 gi|21228434|ref|NP_634356.1| - 0.15 11.6 0.0 0.38 10.2 0.0 1.7 1 1 1 2 2 2 0 Histone methylation protein DOT1 AdoMet_MTase PF07757.13 gi|21228434|ref|NP_634356.1| - 0.16 12.3 0.0 0.35 11.2 0.0 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase N2227 PF07942.12 gi|21228434|ref|NP_634356.1| - 0.16 11.1 0.0 0.3 10.2 0.0 1.4 1 0 0 1 1 1 0 N2227-like protein Multi_Drug_Res PF00893.19 gi|21228435|ref|NP_634357.1| - 1.9e-29 102.1 7.3 2.5e-29 101.8 7.3 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein TMEM144 PF07857.12 gi|21228435|ref|NP_634357.1| - 0.054 12.4 8.6 0.024 13.6 6.1 1.5 1 1 1 2 2 2 0 Transmembrane family, TMEM144 of transporters DUF2740 PF10872.8 gi|21228437|ref|NP_634359.1| - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2740) eIF-1a PF01176.19 gi|21228438|ref|NP_634360.1| - 1.3e-15 56.9 0.2 1.9e-15 56.4 0.2 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DNA_binding_1 PF01035.20 gi|21228439|ref|NP_634361.1| - 0.2 11.8 0.0 0.23 11.6 0.0 1.1 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, DNA binding domain zinc_ribbon_6 PF14599.6 gi|21228440|ref|NP_634362.1| - 0.0019 18.1 0.3 0.0031 17.5 0.3 1.4 1 1 0 1 1 1 1 Zinc-ribbon OrfB_Zn_ribbon PF07282.11 gi|21228440|ref|NP_634362.1| - 0.056 13.4 1.0 0.074 13.0 1.0 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain eIF-1a PF01176.19 gi|21228441|ref|NP_634363.1| - 1.1e-10 41.1 1.1 1.4e-10 40.8 1.1 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 TPP_enzyme_N PF02776.18 gi|21228442|ref|NP_634364.1| - 1.2e-54 184.6 0.0 1.2e-52 178.0 0.1 2.4 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|21228442|ref|NP_634364.1| - 5e-38 130.3 0.0 1.7e-37 128.6 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|21228442|ref|NP_634364.1| - 1.9e-29 102.1 0.0 7.6e-29 100.2 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 gi|21228442|ref|NP_634364.1| - 0.018 14.8 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Aldedh PF00171.22 gi|21228443|ref|NP_634365.1| - 1.2e-133 446.0 0.0 1.4e-133 445.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|21228443|ref|NP_634365.1| - 0.0015 17.6 0.0 0.0022 17.1 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF963 PF06131.11 gi|21228444|ref|NP_634366.1| - 0.3 10.5 10.4 2.4 7.7 2.1 3.5 2 1 0 2 2 2 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) Cupredoxin_1 PF13473.6 gi|21228445|ref|NP_634367.1| - 1.3e-14 54.2 0.0 1.5e-14 54.0 0.0 1.0 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 gi|21228445|ref|NP_634367.1| - 9.5e-10 38.8 0.6 1.6e-07 31.7 0.6 2.1 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Lipase_C PF18067.1 gi|21228445|ref|NP_634367.1| - 0.0062 17.1 0.0 0.0075 16.8 0.0 1.2 1 0 0 1 1 1 1 Lipase C-terminal domain Phage_Coat_A PF05357.13 gi|21228445|ref|NP_634367.1| - 0.16 11.8 2.0 3.8 7.4 0.1 2.1 1 1 1 2 2 2 0 Phage Coat Protein A Copper-bind PF00127.20 gi|21228446|ref|NP_634368.1| - 1.2e-08 35.3 0.6 0.00039 20.8 0.1 2.2 1 1 1 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|21228446|ref|NP_634368.1| - 2.1e-08 34.2 0.0 3.2e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain DDE_Tnp_1_6 PF13751.6 gi|21228447|ref|NP_634369.1| - 1.2e-28 99.8 2.7 6.6e-28 97.4 2.2 2.3 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 gi|21228447|ref|NP_634369.1| - 1.1e-19 71.0 1.8 3.1e-19 69.5 1.8 1.8 1 1 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.11 gi|21228447|ref|NP_634369.1| - 4e-16 58.8 0.0 1.1e-15 57.3 0.0 1.8 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1_2 PF13586.6 gi|21228447|ref|NP_634369.1| - 0.008 16.5 0.0 0.92 9.9 0.0 2.8 2 0 0 2 2 2 1 Transposase DDE domain RE_XamI PF09572.10 gi|21228447|ref|NP_634369.1| - 0.036 13.7 0.1 0.17 11.6 0.0 2.1 2 1 0 2 2 2 0 XamI restriction endonuclease Methyltransf_25 PF13649.6 gi|21228448|ref|NP_634370.1| - 1e-12 48.6 0.0 1.8e-12 47.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21228448|ref|NP_634370.1| - 4.7e-09 36.3 0.0 7.4e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|21228448|ref|NP_634370.1| - 4.1e-08 32.6 0.0 5.6e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.6 gi|21228448|ref|NP_634370.1| - 1e-07 31.9 0.0 1.6e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21228448|ref|NP_634370.1| - 2.4e-07 30.7 0.0 3.5e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|21228448|ref|NP_634370.1| - 3.5e-07 30.9 0.0 6.3e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|21228448|ref|NP_634370.1| - 4.1e-07 29.7 0.0 7.1e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.12 gi|21228448|ref|NP_634370.1| - 5.7e-07 30.1 0.0 1e-06 29.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|21228448|ref|NP_634370.1| - 3.9e-06 26.6 0.0 6.3e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 GidB PF02527.15 gi|21228448|ref|NP_634370.1| - 4.4e-06 26.2 0.0 6.7e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G CMAS PF02353.20 gi|21228448|ref|NP_634370.1| - 2.8e-05 23.6 0.0 5e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|21228448|ref|NP_634370.1| - 5.2e-05 22.9 0.0 7.7e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|21228448|ref|NP_634370.1| - 7e-05 22.4 0.1 0.00017 21.1 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.12 gi|21228448|ref|NP_634370.1| - 0.00031 19.9 0.0 0.00048 19.3 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Ubie_methyltran PF01209.18 gi|21228448|ref|NP_634370.1| - 0.00032 20.1 0.0 0.00054 19.4 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Met_10 PF02475.16 gi|21228448|ref|NP_634370.1| - 0.00099 18.9 0.1 0.0016 18.2 0.1 1.4 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.7 gi|21228448|ref|NP_634370.1| - 0.0014 18.6 0.0 0.0031 17.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|21228448|ref|NP_634370.1| - 0.0034 17.0 0.0 0.005 16.5 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F tRNA_U5-meth_tr PF05958.11 gi|21228448|ref|NP_634370.1| - 0.01 14.8 0.0 0.024 13.6 0.0 1.4 1 1 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_4 PF02390.17 gi|21228448|ref|NP_634370.1| - 0.011 15.2 0.0 0.022 14.2 0.0 1.5 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_16 PF10294.9 gi|21228448|ref|NP_634370.1| - 0.011 15.4 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 0 Lysine methyltransferase GCD14 PF08704.10 gi|21228448|ref|NP_634370.1| - 0.04 13.6 0.1 0.078 12.6 0.0 1.4 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit DUF938 PF06080.12 gi|21228448|ref|NP_634370.1| - 0.046 13.5 0.0 0.067 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) TehB PF03848.14 gi|21228448|ref|NP_634370.1| - 0.12 11.7 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB RimK PF08443.11 gi|21228449|ref|NP_634371.1| - 2.1e-47 161.2 0.0 3.3e-47 160.5 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|21228449|ref|NP_634371.1| - 3.3e-17 62.4 0.0 1e-16 60.8 0.0 1.7 2 0 0 2 2 2 1 Prokaryotic glutathione synthetase, ATP-grasp domain Rimk_N PF18030.1 gi|21228449|ref|NP_634371.1| - 5.8e-16 58.7 0.0 1.2e-15 57.6 0.0 1.5 1 0 0 1 1 1 1 RimK PreATP-grasp domain ATP-grasp_3 PF02655.14 gi|21228449|ref|NP_634371.1| - 1.1e-07 32.0 0.0 1.6e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|21228449|ref|NP_634371.1| - 6.5e-05 22.3 0.0 0.0067 15.7 0.0 2.6 1 1 2 3 3 3 1 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 gi|21228449|ref|NP_634371.1| - 0.00058 19.2 0.1 0.011 14.9 0.1 2.7 1 1 0 1 1 1 1 YheC/D like ATP-grasp ATP-grasp PF02222.22 gi|21228449|ref|NP_634371.1| - 0.0011 18.6 0.0 0.0025 17.4 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|21228449|ref|NP_634371.1| - 0.0012 18.5 0.0 0.0041 16.7 0.0 1.8 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus Synapsin_C PF02750.14 gi|21228449|ref|NP_634371.1| - 0.0039 16.7 0.0 0.0055 16.2 0.0 1.2 1 0 0 1 1 1 1 Synapsin, ATP binding domain CPSase_L_D2 PF02786.17 gi|21228449|ref|NP_634371.1| - 0.0086 15.6 0.0 0.04 13.4 0.0 2.0 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Ins134_P3_kin PF05770.11 gi|21228449|ref|NP_634371.1| - 0.019 14.5 0.0 0.39 10.2 0.0 2.3 1 1 1 2 2 2 0 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain Herpes_HEPA PF03324.14 gi|21228449|ref|NP_634371.1| - 0.12 12.9 0.0 0.27 11.7 0.0 1.6 1 0 0 1 1 1 0 Herpesvirus DNA helicase/primase complex associated protein TPR_1 PF00515.28 gi|21228450|ref|NP_634372.1| - 3.8e-92 298.7 39.6 3.9e-10 39.1 0.1 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21228450|ref|NP_634372.1| - 5.2e-80 257.3 39.1 1.1e-07 31.3 0.4 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21228450|ref|NP_634372.1| - 1.2e-70 232.9 46.1 2.1e-09 36.9 0.1 10.1 4 2 6 10 10 10 10 TPR repeat TPR_8 PF13181.6 gi|21228450|ref|NP_634372.1| - 1.4e-64 209.0 33.9 6.7e-07 29.0 0.1 10.2 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21228450|ref|NP_634372.1| - 5.3e-53 173.7 22.8 2.8e-06 27.3 0.0 10.3 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21228450|ref|NP_634372.1| - 7.6e-52 173.5 41.1 1.8e-10 41.0 0.7 8.0 1 1 8 9 9 9 9 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21228450|ref|NP_634372.1| - 7.3e-51 170.6 18.4 5.4e-11 43.0 1.2 6.1 1 1 4 7 7 7 7 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21228450|ref|NP_634372.1| - 1.6e-45 149.9 20.4 3.3e-05 24.3 0.1 10.1 1 1 9 10 10 10 10 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21228450|ref|NP_634372.1| - 3.9e-40 136.2 24.3 6.4e-08 33.0 0.3 7.4 2 2 4 7 7 7 7 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21228450|ref|NP_634372.1| - 8.4e-32 108.1 27.5 0.00013 21.7 0.0 10.2 10 0 0 10 10 10 6 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21228450|ref|NP_634372.1| - 2.4e-31 105.4 17.9 0.0022 17.9 0.0 10.2 8 2 2 10 10 10 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21228450|ref|NP_634372.1| - 1.8e-27 95.3 6.5 3.9e-05 23.7 0.0 6.3 1 1 6 8 8 8 8 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21228450|ref|NP_634372.1| - 8.3e-26 90.0 14.4 7.1e-09 35.8 0.1 4.7 3 1 2 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|21228450|ref|NP_634372.1| - 5.5e-24 83.2 18.8 0.53 11.0 0.1 10.2 10 0 0 10 10 10 6 Tetratricopeptide repeat DUF3856 PF12968.7 gi|21228450|ref|NP_634372.1| - 6e-15 55.6 13.8 0.025 14.6 0.1 8.3 1 1 6 7 7 7 5 Domain of Unknown Function (DUF3856) MIT PF04212.18 gi|21228450|ref|NP_634372.1| - 7.9e-15 54.7 34.9 0.012 15.7 0.1 10.2 9 1 0 10 10 10 5 MIT (microtubule interacting and transport) domain NARP1 PF12569.8 gi|21228450|ref|NP_634372.1| - 9.4e-14 51.2 8.2 0.02 13.8 0.0 5.2 2 2 3 5 5 5 5 NMDA receptor-regulated protein 1 BTAD PF03704.17 gi|21228450|ref|NP_634372.1| - 2.7e-12 47.3 8.0 0.0045 17.4 0.7 4.6 1 1 3 5 5 5 3 Bacterial transcriptional activator domain TPR_15 PF13429.6 gi|21228450|ref|NP_634372.1| - 4.2e-11 42.6 12.5 0.00093 18.5 1.9 4.2 1 1 2 3 3 3 3 Tetratricopeptide repeat PPR PF01535.20 gi|21228450|ref|NP_634372.1| - 9.1e-11 41.3 8.9 0.56 10.6 0.1 8.6 9 0 0 9 9 9 3 PPR repeat Coatomer_E PF04733.14 gi|21228450|ref|NP_634372.1| - 4.9e-10 39.3 9.6 3.6e-06 26.6 0.3 4.4 2 2 3 5 5 5 2 Coatomer epsilon subunit TPR_3 PF07720.12 gi|21228450|ref|NP_634372.1| - 3.9e-09 36.3 23.1 0.16 12.0 0.1 9.3 9 1 1 10 10 9 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|21228450|ref|NP_634372.1| - 1.1e-07 31.1 16.5 1 8.9 0.2 8.7 8 0 0 8 8 8 1 SHNi-TPR TPR_20 PF14561.6 gi|21228450|ref|NP_634372.1| - 1.2e-07 31.9 9.1 0.18 12.2 0.1 5.4 3 2 2 5 5 5 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|21228450|ref|NP_634372.1| - 2.2e-07 30.8 15.2 0.48 10.5 0.0 8.1 4 4 5 9 9 9 1 Fis1 C-terminal tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|21228450|ref|NP_634372.1| - 2.6e-07 30.6 11.0 0.19 11.8 0.4 5.7 1 1 4 5 5 5 2 Putative TPR-like repeat TPR_4 PF07721.14 gi|21228450|ref|NP_634372.1| - 3.7e-07 30.1 0.6 17 6.4 0.0 6.5 6 0 0 6 6 6 0 Tetratricopeptide repeat FAT PF02259.23 gi|21228450|ref|NP_634372.1| - 1.9e-06 27.3 9.0 0.19 10.9 0.3 5.0 1 1 3 5 5 5 3 FAT domain ANAPC5 PF12862.7 gi|21228450|ref|NP_634372.1| - 0.00013 22.0 8.2 1.6 8.8 0.1 6.6 5 2 1 7 7 7 1 Anaphase-promoting complex subunit 5 TPR_5 PF12688.7 gi|21228450|ref|NP_634372.1| - 0.00013 22.2 6.6 0.33 11.2 0.2 5.5 4 2 1 5 5 4 1 Tetratrico peptide repeat Lambda_Kil PF06301.11 gi|21228450|ref|NP_634372.1| - 0.0059 16.2 2.8 39 4.0 0.0 5.8 8 0 0 8 8 5 0 Bacteriophage lambda Kil protein ChAPs PF09295.10 gi|21228450|ref|NP_634372.1| - 0.01 14.9 0.7 0.28 10.2 0.0 2.3 2 0 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) NRBF2_MIT PF17169.4 gi|21228450|ref|NP_634372.1| - 0.011 16.0 8.0 40 4.5 0.0 6.5 4 3 4 8 8 7 0 MIT domain of nuclear receptor-binding factor 2 Clathrin PF00637.20 gi|21228450|ref|NP_634372.1| - 0.018 14.9 13.5 0.23 11.3 0.5 5.2 1 1 3 5 5 5 0 Region in Clathrin and VPS Surfac_D-trimer PF09006.11 gi|21228450|ref|NP_634372.1| - 0.024 14.5 0.2 1.9 8.5 0.0 3.3 3 0 0 3 3 2 0 Lung surfactant protein D coiled-coil trimerisation RPN7 PF10602.9 gi|21228450|ref|NP_634372.1| - 0.058 13.1 8.4 0.33 10.6 0.3 4.8 3 1 3 6 6 6 0 26S proteasome subunit RPN7 SMG1 PF15785.5 gi|21228450|ref|NP_634372.1| - 0.069 11.5 0.8 3 6.1 0.0 2.5 2 0 0 2 2 2 0 Serine/threonine-protein kinase smg-1 Csm2_III-A PF03750.13 gi|21228450|ref|NP_634372.1| - 0.094 13.6 2.7 44 4.9 0.0 4.3 3 1 2 5 5 5 0 Csm2 Type III-A Alkyl_sulf_dimr PF14863.6 gi|21228450|ref|NP_634372.1| - 0.099 13.1 5.2 27 5.2 0.0 4.5 2 2 5 7 7 7 0 Alkyl sulfatase dimerisation Cir_Bir_Yir PF06022.11 gi|21228450|ref|NP_634372.1| - 0.29 10.6 3.6 0.68 9.4 0.1 2.2 1 1 1 2 2 2 0 Plasmodium variant antigen protein Cir/Yir/Bir PknG_TPR PF16918.5 gi|21228450|ref|NP_634372.1| - 0.31 9.7 2.0 0.54 8.9 0.1 2.3 2 1 0 2 2 2 0 Protein kinase G tetratricopeptide repeat Exonuc_VII_S PF02609.16 gi|21228450|ref|NP_634372.1| - 0.36 10.9 8.0 15 5.8 0.1 5.4 5 0 0 5 5 5 0 Exonuclease VII small subunit HTH_Bact PF18768.1 gi|21228450|ref|NP_634372.1| - 0.51 10.0 9.0 5.6 6.6 0.0 6.2 8 0 0 8 8 6 0 Helix-turn-helix bacterial domain DUF1510 PF07423.11 gi|21228450|ref|NP_634372.1| - 0.99 9.6 3.6 8.5 6.6 0.1 4.0 4 2 1 5 5 4 0 Domain of unknown function (DUF1510) HAD_2 PF13419.6 gi|21228451|ref|NP_634373.1| - 7.3e-30 104.4 0.0 9.5e-30 104.0 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|21228451|ref|NP_634373.1| - 4.7e-20 72.8 0.1 4.3e-19 69.6 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|21228451|ref|NP_634373.1| - 1.4e-09 37.8 0.0 2.7e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|21228451|ref|NP_634373.1| - 4e-09 37.2 0.3 5.4e-09 36.7 0.3 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Acid_PPase PF12689.7 gi|21228451|ref|NP_634373.1| - 0.01 15.7 0.0 1.1 9.0 0.0 2.5 2 1 0 2 2 2 0 Acid Phosphatase NT5C PF06941.12 gi|21228451|ref|NP_634373.1| - 0.034 14.0 0.2 0.32 10.8 0.2 2.3 1 1 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) PGP_phosphatase PF09419.10 gi|21228451|ref|NP_634373.1| - 0.13 11.8 0.1 2.2 7.9 0.1 2.3 2 1 0 2 2 2 0 Mitochondrial PGP phosphatase Hydrolase_6 PF13344.6 gi|21228451|ref|NP_634373.1| - 0.14 12.3 0.0 0.45 10.7 0.0 1.8 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|21228451|ref|NP_634373.1| - 0.15 11.5 0.2 0.32 10.4 0.0 1.6 2 0 0 2 2 2 0 Putative Phosphatase TPR_1 PF00515.28 gi|21228452|ref|NP_634374.1| - 6.4e-71 231.5 17.4 2.3e-11 43.0 0.1 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21228452|ref|NP_634374.1| - 3.5e-54 176.6 15.0 1.9e-08 33.8 0.1 8.1 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21228452|ref|NP_634374.1| - 3.5e-44 145.3 18.4 1.4e-06 28.1 0.1 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21228452|ref|NP_634374.1| - 5.5e-36 122.7 1.3 4.6e-11 42.8 0.0 5.5 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21228452|ref|NP_634374.1| - 2.1e-34 116.9 13.7 5.2e-06 26.0 0.1 8.4 6 3 3 9 9 9 6 TPR repeat TPR_17 PF13431.6 gi|21228452|ref|NP_634374.1| - 2.3e-32 109.0 7.7 0.00016 21.8 0.1 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21228452|ref|NP_634374.1| - 1.2e-29 102.6 1.4 1.8e-08 34.9 0.0 4.8 2 2 2 5 5 5 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21228452|ref|NP_634374.1| - 1.2e-26 91.1 8.4 0.00038 21.0 0.0 7.9 2 2 6 8 8 8 7 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21228452|ref|NP_634374.1| - 3.6e-25 88.3 5.5 6.1e-08 33.1 0.1 5.6 3 2 3 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21228452|ref|NP_634374.1| - 2.4e-24 85.3 0.1 0.00044 20.3 0.2 6.0 2 1 5 7 7 7 6 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21228452|ref|NP_634374.1| - 7.4e-20 70.2 9.4 0.024 14.5 0.1 7.1 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21228452|ref|NP_634374.1| - 7.7e-18 63.9 8.6 0.15 12.7 0.1 7.6 8 0 0 8 8 7 5 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21228452|ref|NP_634374.1| - 4.7e-13 49.2 5.5 0.0017 18.5 0.0 5.0 1 1 4 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 DUF3856 PF12968.7 gi|21228452|ref|NP_634374.1| - 4.9e-12 46.1 6.1 0.0036 17.4 0.0 6.1 1 1 5 6 6 6 3 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.6 gi|21228452|ref|NP_634374.1| - 6.7e-11 42.1 4.5 0.082 13.0 0.1 5.3 4 2 2 6 6 5 3 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 gi|21228452|ref|NP_634374.1| - 3.3e-09 36.1 9.0 0.18 11.9 0.1 7.1 5 2 2 7 7 7 1 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|21228452|ref|NP_634374.1| - 1.1e-08 35.1 5.9 0.001 19.1 0.1 3.6 1 1 3 4 4 4 2 Putative TPR-like repeat NARP1 PF12569.8 gi|21228452|ref|NP_634374.1| - 8.8e-07 28.2 4.6 0.054 12.4 0.2 3.7 1 1 1 3 3 3 3 NMDA receptor-regulated protein 1 MIT PF04212.18 gi|21228452|ref|NP_634374.1| - 1.8e-06 27.9 15.3 0.45 10.6 0.1 6.8 3 3 5 8 8 8 1 MIT (microtubule interacting and transport) domain ChAPs PF09295.10 gi|21228452|ref|NP_634374.1| - 4.4e-05 22.7 0.2 0.069 12.1 0.0 2.2 2 0 0 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) TPR_20 PF14561.6 gi|21228452|ref|NP_634374.1| - 4.6e-05 23.7 1.1 5.8 7.3 0.0 4.1 3 1 0 4 4 4 0 Tetratricopeptide repeat TOM20_plant PF06552.12 gi|21228452|ref|NP_634374.1| - 0.00011 22.0 2.9 0.034 13.9 0.0 4.2 2 2 3 5 5 5 1 Plant specific mitochondrial import receptor subunit TOM20 DUF627 PF04781.12 gi|21228452|ref|NP_634374.1| - 0.00019 21.4 0.2 0.28 11.2 0.0 3.8 3 2 1 4 4 4 1 Protein of unknown function (DUF627) HTH_Bact PF18768.1 gi|21228452|ref|NP_634374.1| - 0.00027 20.5 3.5 24 4.6 0.0 6.8 7 0 0 7 7 7 0 Helix-turn-helix bacterial domain FAT PF02259.23 gi|21228452|ref|NP_634374.1| - 0.00029 20.2 1.0 0.47 9.6 0.1 3.3 1 1 2 3 3 3 2 FAT domain RPN7 PF10602.9 gi|21228452|ref|NP_634374.1| - 0.0022 17.7 6.2 0.05 13.3 1.2 3.6 2 1 1 3 3 3 1 26S proteasome subunit RPN7 TPR_3 PF07720.12 gi|21228452|ref|NP_634374.1| - 0.0065 16.4 6.6 0.96 9.5 0.0 5.5 7 0 0 7 7 5 1 Tetratricopeptide repeat DUF5113 PF17140.4 gi|21228452|ref|NP_634374.1| - 0.012 15.5 1.0 24 4.7 0.0 4.4 3 2 2 5 5 5 0 Domain of unknown function (DUF5113) BofC_C PF08955.10 gi|21228452|ref|NP_634374.1| - 0.015 15.3 0.0 20 5.3 0.0 4.1 4 1 1 5 5 4 0 BofC C-terminal domain BTAD PF03704.17 gi|21228452|ref|NP_634374.1| - 0.018 15.5 2.1 3.4 8.1 0.0 3.4 4 1 0 4 4 3 0 Bacterial transcriptional activator domain DUF4919 PF16266.5 gi|21228452|ref|NP_634374.1| - 0.03 14.3 0.4 0.31 11.0 0.0 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4919) DUF2550 PF10739.9 gi|21228452|ref|NP_634374.1| - 0.043 13.8 0.0 0.065 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2550) SHNi-TPR PF10516.9 gi|21228452|ref|NP_634374.1| - 0.14 11.7 10.6 5.4 6.5 0.1 5.1 5 0 0 5 5 5 0 SHNi-TPR Sam68-YY PF16568.5 gi|21228452|ref|NP_634374.1| - 0.16 12.7 0.2 2.8 8.8 0.0 2.9 3 0 0 3 3 2 0 Tyrosine-rich domain of Sam68 TcdB_N PF12918.7 gi|21228452|ref|NP_634374.1| - 0.21 11.9 2.9 3.7 7.9 0.5 2.9 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain UPF0122 PF04297.14 gi|21228452|ref|NP_634374.1| - 0.36 11.1 3.0 3.9 7.8 0.0 3.8 4 2 1 5 5 4 0 Putative helix-turn-helix protein, YlxM / p13 like Response_reg PF00072.24 gi|21228453|ref|NP_634375.1| - 1.8e-18 66.7 0.0 2.9e-18 66.1 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain HTH_24 PF13412.6 gi|21228453|ref|NP_634375.1| - 6.6e-05 22.4 0.6 0.00016 21.2 0.6 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|21228453|ref|NP_634375.1| - 0.001 18.9 0.2 0.0017 18.1 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|21228453|ref|NP_634375.1| - 0.0021 17.9 0.3 0.0054 16.6 0.3 1.7 1 0 0 1 1 1 1 HTH domain GATase_7 PF13537.6 gi|21228453|ref|NP_634375.1| - 0.05 13.5 0.1 0.074 13.0 0.1 1.3 1 0 0 1 1 1 0 Glutamine amidotransferase domain HTH_Mga PF08280.11 gi|21228453|ref|NP_634375.1| - 0.062 13.3 0.1 0.34 11.0 0.1 1.9 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HSDR_N PF04313.14 gi|21228453|ref|NP_634375.1| - 0.15 12.0 0.8 0.83 9.6 0.8 1.4 1 1 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) MarR_2 PF12802.7 gi|21228454|ref|NP_634376.1| - 2.2e-05 24.2 0.0 3.1e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|21228454|ref|NP_634376.1| - 0.00013 21.7 0.0 0.00016 21.4 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|21228454|ref|NP_634376.1| - 0.00044 19.7 0.1 0.00062 19.3 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|21228454|ref|NP_634376.1| - 0.00095 19.0 0.0 0.0014 18.5 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|21228454|ref|NP_634376.1| - 0.0038 17.1 0.0 0.0055 16.6 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|21228454|ref|NP_634376.1| - 0.0041 16.9 0.1 0.0056 16.5 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|21228454|ref|NP_634376.1| - 0.006 16.5 0.0 0.0083 16.0 0.0 1.3 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.20 gi|21228454|ref|NP_634376.1| - 0.01 16.2 0.0 0.015 15.7 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.11 gi|21228454|ref|NP_634376.1| - 0.02 15.0 0.1 0.033 14.3 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21228454|ref|NP_634376.1| - 0.022 14.7 0.0 0.034 14.1 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|21228454|ref|NP_634376.1| - 0.065 13.3 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.6 gi|21228454|ref|NP_634376.1| - 0.069 13.1 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_rep_O PF04492.13 gi|21228454|ref|NP_634376.1| - 0.084 13.5 0.0 0.11 13.1 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage replication protein O Pyr_redox_2 PF07992.14 gi|21228455|ref|NP_634377.1| - 4.6e-47 160.7 1.1 5.6e-47 160.4 1.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|21228455|ref|NP_634377.1| - 7.7e-31 107.5 4.2 4.2e-23 82.0 0.2 2.0 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|21228455|ref|NP_634377.1| - 3.3e-15 56.4 7.6 2.3e-12 47.3 0.4 3.8 2 2 2 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|21228455|ref|NP_634377.1| - 5.4e-09 35.9 0.8 5.3e-06 26.0 0.0 2.9 2 1 1 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|21228455|ref|NP_634377.1| - 1.4e-08 33.9 1.5 0.0002 20.2 0.1 3.1 3 0 0 3 3 3 2 HI0933-like protein DAO PF01266.24 gi|21228455|ref|NP_634377.1| - 1.6e-07 31.3 3.2 0.0023 17.6 0.5 3.1 3 0 0 3 3 3 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|21228455|ref|NP_634377.1| - 5.2e-07 29.8 0.1 8.8e-05 22.7 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|21228455|ref|NP_634377.1| - 9.3e-07 28.4 0.9 3.5e-05 23.2 0.1 2.5 3 0 0 3 3 3 1 FAD binding domain FAD_binding_2 PF00890.24 gi|21228455|ref|NP_634377.1| - 2.6e-06 26.8 2.7 0.00013 21.2 0.1 3.6 3 1 0 4 4 4 1 FAD binding domain Thi4 PF01946.17 gi|21228455|ref|NP_634377.1| - 2.2e-05 23.8 2.1 0.0022 17.3 0.1 3.4 4 0 0 4 4 4 1 Thi4 family GIDA PF01134.22 gi|21228455|ref|NP_634377.1| - 3.3e-05 23.1 9.6 0.0046 16.1 0.1 3.8 3 2 2 5 5 5 2 Glucose inhibited division protein A K_oxygenase PF13434.6 gi|21228455|ref|NP_634377.1| - 0.00018 20.7 1.0 0.03 13.5 0.1 2.9 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|21228455|ref|NP_634377.1| - 0.0027 17.7 3.3 0.074 13.0 0.1 2.9 3 0 0 3 3 3 1 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|21228455|ref|NP_634377.1| - 0.0064 15.6 0.9 0.99 8.4 0.1 2.4 3 0 0 3 3 3 2 Lycopene cyclase protein FMO-like PF00743.19 gi|21228455|ref|NP_634377.1| - 0.017 13.5 0.0 0.03 12.7 0.0 1.5 1 1 0 1 1 1 0 Flavin-binding monooxygenase-like Trp_halogenase PF04820.14 gi|21228455|ref|NP_634377.1| - 0.047 12.5 1.8 4.9 5.9 0.1 3.0 3 0 0 3 3 3 0 Tryptophan halogenase NAD_binding_7 PF13241.6 gi|21228455|ref|NP_634377.1| - 0.14 12.7 1.1 1.1 9.7 0.4 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding Thioredoxin_3 PF13192.6 gi|21228456|ref|NP_634378.1| - 2.5e-10 40.2 0.0 2.9e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|21228456|ref|NP_634378.1| - 2.7e-06 27.5 0.0 3.8e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin PF00085.20 gi|21228456|ref|NP_634378.1| - 3.4e-05 23.7 0.0 3.9e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|21228456|ref|NP_634378.1| - 0.0086 16.5 0.0 0.012 16.0 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain DSBA PF01323.20 gi|21228456|ref|NP_634378.1| - 0.011 15.5 0.0 0.013 15.2 0.0 1.2 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Thioredoxin_7 PF13899.6 gi|21228456|ref|NP_634378.1| - 0.082 13.1 0.1 0.27 11.4 0.0 1.7 1 1 1 2 2 2 0 Thioredoxin-like TP_methylase PF00590.20 gi|21228457|ref|NP_634379.1| - 1.2e-18 67.8 0.0 1.5e-18 67.6 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.13 gi|21228458|ref|NP_634380.1| - 5.8e-32 109.6 1.1 6.7e-32 109.4 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF357) DUF555 PF04475.12 gi|21228459|ref|NP_634381.1| - 3.6e-49 165.2 0.1 4.5e-49 164.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF555) Dodecin PF07311.12 gi|21228459|ref|NP_634381.1| - 0.0042 17.3 0.5 1.1 9.5 0.0 2.3 2 0 0 2 2 2 2 Dodecin Rad50_zn_hook PF04423.14 gi|21228459|ref|NP_634381.1| - 0.075 12.9 0.4 0.16 11.8 0.1 1.6 2 0 0 2 2 2 0 Rad50 zinc hook motif Zn-C2H2_12 PF18112.1 gi|21228459|ref|NP_634381.1| - 1.5 9.4 5.0 0.89 10.1 1.4 2.2 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain PfkB PF00294.24 gi|21228460|ref|NP_634382.1| - 3.3e-55 187.5 0.0 3.9e-55 187.3 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HAP2-GCS1 PF10699.9 gi|21228460|ref|NP_634382.1| - 0.063 13.3 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Male gamete fusion factor Diphthami_syn_2 PF01902.17 gi|21228461|ref|NP_634383.1| - 4.9e-72 242.0 0.2 5.5e-72 241.8 0.2 1.0 1 0 0 1 1 1 1 Diphthamide synthase AIRC PF00731.20 gi|21228462|ref|NP_634384.1| - 5.5e-43 146.1 0.9 6.5e-43 145.8 0.9 1.0 1 0 0 1 1 1 1 AIR carboxylase DXP_reductoisom PF02670.16 gi|21228462|ref|NP_634384.1| - 0.051 14.3 0.0 0.071 13.8 0.0 1.4 1 1 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase mIF3 PF14877.6 gi|21228462|ref|NP_634384.1| - 0.16 11.6 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial translation initiation factor CM_2 PF01817.21 gi|21228463|ref|NP_634385.1| - 5.5e-14 52.3 4.1 6.3e-14 52.1 4.1 1.0 1 0 0 1 1 1 1 Chorismate mutase type II FTCD_C PF04961.12 gi|21228463|ref|NP_634385.1| - 0.02 14.6 0.2 0.021 14.6 0.2 1.0 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase GHMP_kinases_N PF00288.26 gi|21228464|ref|NP_634386.1| - 2.2e-12 47.0 1.2 4.9e-12 45.9 1.2 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|21228464|ref|NP_634386.1| - 2.5e-05 24.5 0.4 0.00014 22.2 0.1 2.2 2 0 0 2 2 2 1 GHMP kinases C terminal FlpD PF02662.16 gi|21228464|ref|NP_634386.1| - 0.073 13.1 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit PhoU PF01895.19 gi|21228465|ref|NP_634387.1| - 4.8e-26 91.0 5.2 4.6e-16 59.0 0.1 2.4 2 0 0 2 2 2 2 PhoU domain HSBP1 PF06825.12 gi|21228465|ref|NP_634387.1| - 0.035 14.0 0.6 1 9.3 0.2 2.9 2 0 0 2 2 2 0 Heat shock factor binding protein 1 FliS PF02561.14 gi|21228465|ref|NP_634387.1| - 0.086 13.1 0.0 0.18 12.1 0.0 1.5 1 0 0 1 1 1 0 Flagellar protein FliS PspA_IM30 PF04012.12 gi|21228465|ref|NP_634387.1| - 0.1 12.2 0.0 1.7 8.2 0.0 2.2 2 0 0 2 2 2 0 PspA/IM30 family HAMP PF00672.25 gi|21228465|ref|NP_634387.1| - 0.13 12.7 3.2 9.2 6.7 0.1 3.1 4 0 0 4 4 4 0 HAMP domain MMR_HSR1 PF01926.23 gi|21228466|ref|NP_634388.1| - 1.6e-16 60.4 0.1 2.4e-16 59.8 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 gi|21228466|ref|NP_634388.1| - 1e-14 54.5 3.2 1e-06 28.5 0.8 3.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain Septin PF00735.18 gi|21228466|ref|NP_634388.1| - 4.2e-06 26.2 0.1 5.1e-06 26.0 0.1 1.1 1 0 0 1 1 1 1 Septin Arf PF00025.21 gi|21228466|ref|NP_634388.1| - 5.1e-06 26.1 0.0 0.012 15.0 0.0 2.4 2 0 0 2 2 2 2 ADP-ribosylation factor family RsgA_GTPase PF03193.16 gi|21228466|ref|NP_634388.1| - 6.3e-06 26.2 0.1 0.0067 16.3 0.1 2.1 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 gi|21228466|ref|NP_634388.1| - 6.3e-05 23.2 0.2 0.025 14.8 0.0 2.2 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 gi|21228466|ref|NP_634388.1| - 0.00065 19.2 0.0 0.045 13.2 0.0 2.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_24 PF13479.6 gi|21228466|ref|NP_634388.1| - 0.001 18.8 0.1 0.0014 18.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain FeoB_N PF02421.18 gi|21228466|ref|NP_634388.1| - 0.0026 17.3 0.7 0.02 14.4 0.7 2.4 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_18 PF13238.6 gi|21228466|ref|NP_634388.1| - 0.007 16.9 0.0 0.016 15.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain Ras PF00071.22 gi|21228466|ref|NP_634388.1| - 0.0098 15.5 0.1 3.4 7.3 0.0 2.5 2 1 0 2 2 2 1 Ras family ABC_tran PF00005.27 gi|21228466|ref|NP_634388.1| - 0.012 16.1 0.0 0.017 15.6 0.0 1.3 1 0 0 1 1 1 0 ABC transporter NB-ARC PF00931.22 gi|21228466|ref|NP_634388.1| - 0.015 14.5 0.1 0.018 14.2 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain MobB PF03205.14 gi|21228466|ref|NP_634388.1| - 0.02 14.8 0.2 0.041 13.8 0.0 1.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 gi|21228466|ref|NP_634388.1| - 0.026 14.4 0.0 0.034 14.1 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea MMR_HSR1_Xtn PF16897.5 gi|21228466|ref|NP_634388.1| - 0.033 14.2 0.0 0.059 13.4 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain AAA_35 PF14516.6 gi|21228466|ref|NP_634388.1| - 0.04 12.7 0.0 0.061 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain AAA_16 PF13191.6 gi|21228466|ref|NP_634388.1| - 0.045 14.1 0.0 0.067 13.6 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|21228466|ref|NP_634388.1| - 0.047 14.1 0.1 0.11 12.9 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|21228466|ref|NP_634388.1| - 0.096 13.1 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.17 gi|21228466|ref|NP_634388.1| - 0.098 11.7 0.0 0.14 11.2 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 TniB PF05621.11 gi|21228466|ref|NP_634388.1| - 0.11 11.9 0.0 0.4 10.1 0.0 1.9 1 1 1 2 2 2 0 Bacterial TniB protein NTPase_1 PF03266.15 gi|21228466|ref|NP_634388.1| - 0.11 12.4 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 NTPase PPV_E1_C PF00519.17 gi|21228466|ref|NP_634388.1| - 0.15 10.9 0.1 0.21 10.4 0.1 1.2 1 0 0 1 1 1 0 Papillomavirus helicase DUF2073 PF09846.9 gi|21228467|ref|NP_634389.1| - 1.7e-46 156.4 0.5 2e-46 156.2 0.5 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2073) GatB_Yqey PF02637.18 gi|21228467|ref|NP_634389.1| - 0.007 16.3 1.2 0.009 15.9 1.1 1.3 1 1 0 1 1 1 1 GatB domain SIS PF01380.22 gi|21228469|ref|NP_634391.1| - 6.8e-18 64.8 0.1 1e-17 64.2 0.1 1.3 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 gi|21228469|ref|NP_634391.1| - 2.6e-05 24.2 2.4 0.077 13.0 0.1 2.2 1 1 1 2 2 2 2 SIS domain THF_DHG_CYH_C PF02882.19 gi|21228469|ref|NP_634391.1| - 0.0054 16.1 1.1 0.0074 15.6 0.6 1.5 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Glu_dehyd_C PF16912.5 gi|21228469|ref|NP_634391.1| - 0.02 14.4 0.1 0.039 13.4 0.1 1.5 1 1 0 1 1 1 0 Glucose dehydrogenase C-terminus Aminotran_1_2 PF00155.21 gi|21228470|ref|NP_634392.1| - 9e-69 232.4 0.0 1.1e-68 232.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|21228470|ref|NP_634392.1| - 2.8e-11 43.3 0.0 4.4e-11 42.7 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|21228470|ref|NP_634392.1| - 9.2e-11 41.3 0.0 1.5e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|21228470|ref|NP_634392.1| - 1.4e-09 37.0 0.1 2.1e-09 36.4 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|21228470|ref|NP_634392.1| - 5.8e-05 22.5 0.0 7.9e-05 22.1 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase DsbD PF02683.15 gi|21228471|ref|NP_634393.1| - 8.2e-17 61.8 11.7 1.1e-16 61.4 11.7 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|21228471|ref|NP_634393.1| - 4e-10 40.0 6.1 5.8e-10 39.4 6.1 1.4 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region NOG1_N PF17835.1 gi|21228472|ref|NP_634394.1| - 1.6e-46 158.2 0.2 2.6e-46 157.5 0.2 1.3 1 0 0 1 1 1 1 NOG1 N-terminal helical domain NOG1 PF06858.14 gi|21228472|ref|NP_634394.1| - 2e-21 75.5 0.1 3.7e-21 74.7 0.1 1.5 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 gi|21228472|ref|NP_634394.1| - 3.7e-20 72.1 0.0 9.3e-20 70.8 0.0 1.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|21228472|ref|NP_634394.1| - 2.7e-11 43.3 0.0 4.6e-11 42.5 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Arf PF00025.21 gi|21228472|ref|NP_634394.1| - 7.6e-06 25.5 0.0 5e-05 22.8 0.0 2.2 1 1 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 gi|21228472|ref|NP_634394.1| - 6.9e-05 22.8 0.3 0.01 15.7 0.0 2.7 1 1 1 2 2 2 1 RsgA GTPase GTP_EFTU PF00009.27 gi|21228472|ref|NP_634394.1| - 0.00069 19.2 0.0 0.0074 15.8 0.0 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 gi|21228472|ref|NP_634394.1| - 0.0061 15.9 0.0 0.01 15.2 0.0 1.4 1 0 0 1 1 1 1 AIG1 family MeaB PF03308.16 gi|21228472|ref|NP_634394.1| - 0.021 13.8 0.0 1.9 7.4 0.0 2.7 2 1 1 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 gi|21228472|ref|NP_634394.1| - 0.042 13.6 0.1 2 8.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 gi|21228472|ref|NP_634394.1| - 0.07 13.4 0.0 0.89 9.8 0.0 2.4 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase HrcA_DNA-bdg PF03444.15 gi|21228473|ref|NP_634395.1| - 1.1e-37 127.6 0.3 3e-37 126.1 0.3 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.28 gi|21228473|ref|NP_634395.1| - 8.1e-23 80.6 0.5 1.6e-10 41.2 0.0 2.7 2 0 0 2 2 2 2 CBS domain Rrf2 PF02082.20 gi|21228473|ref|NP_634395.1| - 3.7e-07 30.4 0.1 1.4e-06 28.6 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulator HTH_11 PF08279.12 gi|21228473|ref|NP_634395.1| - 4.9e-06 26.4 0.1 1.3e-05 25.0 0.1 1.8 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 gi|21228473|ref|NP_634395.1| - 0.057 13.3 0.0 0.28 11.1 0.0 2.2 2 0 0 2 2 2 0 MarR family Sigma70_r4_2 PF08281.12 gi|21228473|ref|NP_634395.1| - 0.073 12.8 0.0 0.32 10.7 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 PRA-PH PF01503.17 gi|21228474|ref|NP_634396.1| - 8.8e-14 51.7 0.2 1e-13 51.5 0.2 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|21228474|ref|NP_634396.1| - 0.00015 21.9 1.2 0.0002 21.5 1.2 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain Aconitase PF00330.20 gi|21228475|ref|NP_634397.1| - 4.1e-91 306.3 0.0 3.6e-89 299.9 0.0 2.1 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) CxxCxxCC PF03692.15 gi|21228476|ref|NP_634398.1| - 2.8e-13 50.4 7.7 6.9e-12 45.9 5.4 3.0 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain ACT PF01842.25 gi|21228477|ref|NP_634399.1| - 2.2e-07 30.5 0.0 5.8e-07 29.2 0.0 1.7 1 0 0 1 1 1 1 ACT domain Transketolase_C PF02780.20 gi|21228477|ref|NP_634399.1| - 0.0079 16.1 0.2 0.18 11.7 0.0 2.1 1 1 1 2 2 2 2 Transketolase, C-terminal domain NT5C PF06941.12 gi|21228478|ref|NP_634400.1| - 4.6e-07 29.9 0.0 3.7e-05 23.7 0.0 2.1 1 1 0 1 1 1 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HAD_SAK_2 PF18143.1 gi|21228478|ref|NP_634400.1| - 0.0094 16.3 0.0 0.016 15.5 0.0 1.5 1 1 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins RDD PF06271.12 gi|21228479|ref|NP_634401.1| - 3.4e-22 79.2 4.9 4.4e-22 78.8 4.9 1.1 1 0 0 1 1 1 1 RDD family DUF2835 PF11197.8 gi|21228479|ref|NP_634401.1| - 0.075 12.9 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2835) DUF373 PF04123.13 gi|21228480|ref|NP_634402.1| - 5.6e-118 394.2 11.3 6.4e-118 394.0 11.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) PNP_UDP_1 PF01048.20 gi|21228481|ref|NP_634403.1| - 1e-42 146.0 0.1 1.2e-42 145.8 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DEAD PF00270.29 gi|21228482|ref|NP_634404.1| - 5.6e-23 81.6 0.0 1e-22 80.7 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|21228482|ref|NP_634404.1| - 2.3e-16 60.1 0.0 6.5e-16 58.7 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|21228482|ref|NP_634404.1| - 2.4e-11 43.9 0.0 5.1e-11 42.9 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 gi|21228482|ref|NP_634404.1| - 0.037 12.7 0.0 0.05 12.3 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain Ribosomal_S13_N PF08069.12 gi|21228482|ref|NP_634404.1| - 0.04 14.0 0.0 0.2 11.7 0.0 2.3 2 0 0 2 2 2 0 Ribosomal S13/S15 N-terminal domain DUF3467 PF11950.8 gi|21228483|ref|NP_634405.1| - 5.3e-18 65.0 0.0 7e-18 64.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3467) PCP_red PF08369.10 gi|21228483|ref|NP_634405.1| - 0.0082 16.3 0.0 0.018 15.3 0.0 1.5 1 0 0 1 1 1 1 Proto-chlorophyllide reductase 57 kD subunit LSM PF01423.22 gi|21228485|ref|NP_634407.1| - 1.8e-20 72.4 2.1 2e-20 72.3 2.1 1.0 1 0 0 1 1 1 1 LSM domain PhoH PF02562.16 gi|21228485|ref|NP_634407.1| - 0.0092 15.4 0.0 0.0092 15.4 0.0 1.1 1 0 0 1 1 1 1 PhoH-like protein B-block_TFIIIC PF04182.12 gi|21228486|ref|NP_634408.1| - 0.00038 20.5 0.1 0.00056 20.0 0.1 1.2 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR_2 PF12802.7 gi|21228486|ref|NP_634408.1| - 0.0033 17.3 0.0 0.017 15.0 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|21228486|ref|NP_634408.1| - 0.038 13.5 0.1 0.089 12.4 0.1 1.7 1 1 1 2 2 2 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|21228486|ref|NP_634408.1| - 0.064 13.2 0.0 0.096 12.6 0.0 1.3 1 0 0 1 1 1 0 MarR family TrmB PF01978.19 gi|21228486|ref|NP_634408.1| - 0.066 13.1 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB SF3a60_bindingd PF12108.8 gi|21228487|ref|NP_634409.1| - 0.37 10.7 1.5 0.68 9.9 1.5 1.4 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain TrpP PF17099.5 gi|21228488|ref|NP_634410.1| - 1.8e-06 27.8 23.0 2.6e-06 27.3 23.0 1.2 1 0 0 1 1 1 1 Tryptophan transporter TrpP ABC_tran PF00005.27 gi|21228489|ref|NP_634411.1| - 2.2e-56 190.2 1.2 5.7e-28 98.1 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|21228489|ref|NP_634411.1| - 3.1e-18 66.6 5.4 2.6e-06 27.5 0.0 4.1 2 2 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21228489|ref|NP_634411.1| - 1.7e-16 60.3 4.0 6.4e-08 32.3 0.2 2.8 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|21228489|ref|NP_634411.1| - 1.5e-09 38.7 4.4 0.00041 20.9 0.1 2.4 2 1 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|21228489|ref|NP_634411.1| - 4.4e-08 32.7 0.2 0.0024 17.6 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|21228489|ref|NP_634411.1| - 5.7e-08 33.3 4.0 0.0044 17.4 0.1 2.9 2 2 0 2 2 2 2 AAA ATPase domain SbcCD_C PF13558.6 gi|21228489|ref|NP_634411.1| - 1.9e-07 31.2 3.0 0.038 14.2 0.8 3.7 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit IstB_IS21 PF01695.17 gi|21228489|ref|NP_634411.1| - 8.9e-07 28.8 5.4 0.2 11.4 0.1 4.2 4 0 0 4 4 4 2 IstB-like ATP binding protein AAA_22 PF13401.6 gi|21228489|ref|NP_634411.1| - 2.7e-06 27.7 7.3 0.029 14.7 1.1 3.5 2 2 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|21228489|ref|NP_634411.1| - 1.1e-05 25.0 1.7 0.027 14.0 0.1 3.7 4 0 0 4 4 4 1 AAA domain RsgA_GTPase PF03193.16 gi|21228489|ref|NP_634411.1| - 1.2e-05 25.3 0.8 0.013 15.5 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_30 PF13604.6 gi|21228489|ref|NP_634411.1| - 1.4e-05 24.9 5.1 0.0025 17.6 0.0 3.2 2 2 0 2 2 2 1 AAA domain AAA_27 PF13514.6 gi|21228489|ref|NP_634411.1| - 3.7e-05 23.4 0.3 0.057 13.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain DLIC PF05783.11 gi|21228489|ref|NP_634411.1| - 0.00016 20.6 0.8 0.031 13.1 0.1 2.2 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) AAA PF00004.29 gi|21228489|ref|NP_634411.1| - 0.00023 21.6 5.5 0.34 11.3 0.1 4.1 3 1 1 4 4 4 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|21228489|ref|NP_634411.1| - 0.00034 21.0 0.0 0.95 9.9 0.0 2.9 2 0 0 2 2 2 1 RNA helicase AAA_33 PF13671.6 gi|21228489|ref|NP_634411.1| - 0.00035 20.8 2.1 1.8 8.7 0.1 3.3 3 0 0 3 3 3 2 AAA domain NACHT PF05729.12 gi|21228489|ref|NP_634411.1| - 0.00041 20.3 0.4 0.0092 15.9 0.0 2.5 2 0 0 2 2 2 1 NACHT domain AAA_15 PF13175.6 gi|21228489|ref|NP_634411.1| - 0.0005 19.9 4.6 0.017 14.8 0.0 3.5 1 1 1 3 3 3 1 AAA ATPase domain TsaE PF02367.17 gi|21228489|ref|NP_634411.1| - 0.00084 19.3 1.0 0.58 10.2 0.0 2.6 3 0 0 3 3 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|21228489|ref|NP_634411.1| - 0.0011 18.7 4.8 0.4 10.4 0.0 3.8 4 0 0 4 4 4 1 AAA domain TniB PF05621.11 gi|21228489|ref|NP_634411.1| - 0.0011 18.4 4.2 0.83 9.0 0.1 4.2 4 1 0 4 4 4 1 Bacterial TniB protein Mg_chelatase PF01078.21 gi|21228489|ref|NP_634411.1| - 0.0012 18.3 1.1 0.38 10.1 0.0 3.1 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI PhoH PF02562.16 gi|21228489|ref|NP_634411.1| - 0.0016 17.9 0.6 5 6.5 0.1 3.4 3 0 0 3 3 3 0 PhoH-like protein T2SSE PF00437.20 gi|21228489|ref|NP_634411.1| - 0.0018 17.4 0.5 0.3 10.1 0.1 2.6 2 0 0 2 2 2 1 Type II/IV secretion system protein DnaB_C PF03796.15 gi|21228489|ref|NP_634411.1| - 0.0018 17.6 3.0 0.42 9.9 0.0 3.3 4 0 0 4 4 4 1 DnaB-like helicase C terminal domain Rad17 PF03215.15 gi|21228489|ref|NP_634411.1| - 0.0036 17.2 0.0 0.93 9.4 0.0 2.6 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_18 PF13238.6 gi|21228489|ref|NP_634411.1| - 0.0039 17.7 4.1 0.55 10.8 0.0 3.7 2 1 2 4 4 3 1 AAA domain NTPase_1 PF03266.15 gi|21228489|ref|NP_634411.1| - 0.0046 16.9 6.9 0.095 12.6 0.1 3.4 4 0 0 4 4 4 1 NTPase PduV-EutP PF10662.9 gi|21228489|ref|NP_634411.1| - 0.0046 16.7 0.4 0.51 10.1 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation PRK PF00485.18 gi|21228489|ref|NP_634411.1| - 0.0049 16.6 0.3 1.7 8.4 0.0 3.1 4 0 0 4 4 2 1 Phosphoribulokinase / Uridine kinase family MobB PF03205.14 gi|21228489|ref|NP_634411.1| - 0.0055 16.6 0.7 0.81 9.6 0.1 2.8 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_13 PF13166.6 gi|21228489|ref|NP_634411.1| - 0.007 15.1 1.0 0.85 8.2 0.1 3.5 3 1 1 4 4 4 1 AAA domain ABC_ATPase PF09818.9 gi|21228489|ref|NP_634411.1| - 0.0071 15.2 10.3 1.2 7.9 0.2 4.1 4 1 0 4 4 4 2 Predicted ATPase of the ABC class G-alpha PF00503.20 gi|21228489|ref|NP_634411.1| - 0.012 14.8 0.7 1.4 8.0 0.1 2.2 1 1 1 2 2 2 0 G-protein alpha subunit AAA_28 PF13521.6 gi|21228489|ref|NP_634411.1| - 0.02 15.1 1.5 0.97 9.7 0.1 2.9 3 0 0 3 3 2 0 AAA domain AAA_14 PF13173.6 gi|21228489|ref|NP_634411.1| - 0.022 14.8 0.4 19 5.3 0.0 3.4 3 0 0 3 3 3 0 AAA domain DUF87 PF01935.17 gi|21228489|ref|NP_634411.1| - 0.023 14.8 0.1 0.81 9.7 0.0 2.3 2 0 0 2 2 2 0 Helicase HerA, central domain Zeta_toxin PF06414.12 gi|21228489|ref|NP_634411.1| - 0.024 13.9 0.5 4 6.7 0.1 2.5 2 0 0 2 2 2 0 Zeta toxin APS_kinase PF01583.20 gi|21228489|ref|NP_634411.1| - 0.028 14.3 2.5 0.28 11.0 0.1 2.8 3 0 0 3 3 2 0 Adenylylsulphate kinase Roc PF08477.13 gi|21228489|ref|NP_634411.1| - 0.028 14.6 0.2 1.7 8.8 0.0 2.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ATPase PF06745.13 gi|21228489|ref|NP_634411.1| - 0.034 13.5 5.7 1.5 8.1 0.0 3.7 4 1 0 4 4 4 0 KaiC AAA_5 PF07728.14 gi|21228489|ref|NP_634411.1| - 0.047 13.7 1.2 0.17 11.9 0.0 2.5 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|21228489|ref|NP_634411.1| - 0.069 12.7 0.4 3.3 7.2 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region KTI12 PF08433.10 gi|21228489|ref|NP_634411.1| - 0.076 12.4 0.5 14 5.0 0.0 2.7 3 0 0 3 3 2 0 Chromatin associated protein KTI12 MMR_HSR1 PF01926.23 gi|21228489|ref|NP_634411.1| - 0.17 12.0 3.9 4.9 7.3 0.5 3.0 2 2 0 2 2 2 0 50S ribosome-binding GTPase Caps_synth PF05704.12 gi|21228489|ref|NP_634411.1| - 0.17 11.2 0.0 0.27 10.6 0.0 1.3 1 0 0 1 1 1 0 Capsular polysaccharide synthesis protein ATPase_2 PF01637.18 gi|21228489|ref|NP_634411.1| - 0.26 11.2 6.2 2.6 7.9 0.0 3.2 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea CbiA PF01656.23 gi|21228489|ref|NP_634411.1| - 0.28 11.2 2.1 6.1 6.9 0.5 2.8 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF3732 PF12532.8 gi|21228489|ref|NP_634411.1| - 0.29 10.7 1.1 0.81 9.2 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3732) ATP_bind_1 PF03029.17 gi|21228489|ref|NP_634411.1| - 0.37 10.5 2.7 2.8 7.6 0.1 2.7 3 0 0 3 3 2 0 Conserved hypothetical ATP binding protein cobW PF02492.19 gi|21228489|ref|NP_634411.1| - 3.7 7.1 6.2 1.7 8.2 0.1 2.9 4 0 0 4 4 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.6 gi|21228489|ref|NP_634411.1| - 4.5 7.6 7.9 3.7 7.9 0.1 3.5 3 1 0 3 3 3 0 AAA domain CbiQ PF02361.16 gi|21228490|ref|NP_634412.1| - 9.3e-33 113.7 6.5 1.2e-32 113.3 6.5 1.1 1 0 0 1 1 1 1 Cobalt transport protein CARDB PF07705.11 gi|21228491|ref|NP_634413.1| - 8.5e-24 83.8 0.8 8.5e-24 83.8 0.8 3.5 4 0 0 4 4 4 1 CARDB PD40 PF07676.12 gi|21228491|ref|NP_634413.1| - 6.3e-20 70.6 24.5 6.2e-06 26.0 0.8 7.5 7 1 0 7 7 7 4 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 gi|21228491|ref|NP_634413.1| - 2e-13 49.9 4.4 0.00056 18.8 0.3 4.9 2 1 2 4 4 4 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region Pectate_lyase22 PF14583.6 gi|21228491|ref|NP_634413.1| - 3.9e-06 25.8 0.0 0.68 8.5 0.0 3.5 1 1 1 3 3 3 3 Oligogalacturonate lyase Gmad1 PF10647.9 gi|21228491|ref|NP_634413.1| - 2.7e-05 24.1 0.0 0.094 12.5 0.0 2.5 2 0 0 2 2 2 2 Lipoprotein LpqB beta-propeller domain DUF5050 PF16472.5 gi|21228491|ref|NP_634413.1| - 0.00079 18.8 0.2 0.0052 16.1 0.6 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF5050) eIF2A PF08662.11 gi|21228491|ref|NP_634413.1| - 0.068 13.1 0.1 1.1 9.1 0.0 2.8 2 1 1 3 3 3 0 Eukaryotic translation initiation factor eIF2A WD40 PF00400.32 gi|21228491|ref|NP_634413.1| - 0.29 12.1 8.0 6.6 7.8 0.1 5.1 4 1 0 4 4 4 0 WD domain, G-beta repeat fn3 PF00041.21 gi|21228491|ref|NP_634413.1| - 0.76 10.2 7.2 0.11 12.8 0.3 3.3 4 1 1 5 5 5 0 Fibronectin type III domain Transposase_mut PF00872.18 gi|21228492|ref|NP_634414.1| - 2.3e-113 378.9 2.6 2.8e-113 378.6 2.6 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|21228492|ref|NP_634414.1| - 7.6e-10 39.1 0.0 2.1e-09 37.7 0.0 1.8 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|21228492|ref|NP_634414.1| - 9.2e-05 22.0 1.1 0.00031 20.3 1.1 1.8 1 1 0 1 1 1 1 Transposase IS66 family DDE_Tnp_ISL3 PF01610.17 gi|21228492|ref|NP_634414.1| - 0.0023 17.7 1.5 0.033 13.9 0.2 2.4 2 1 1 3 3 3 1 Transposase DDE_Tnp_IS240 PF13610.6 gi|21228492|ref|NP_634414.1| - 0.0029 17.8 3.4 0.055 13.7 2.8 2.6 1 1 1 2 2 2 1 DDE domain Dynein_light PF01221.18 gi|21228492|ref|NP_634414.1| - 0.063 13.6 0.9 0.22 11.9 0.6 2.1 2 0 0 2 2 2 0 Dynein light chain type 1 DUF2769 PF10967.8 gi|21228493|ref|NP_634415.1| - 2.2e-09 37.8 14.2 2.2e-09 37.8 14.2 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF2769) AMP-binding PF00501.28 gi|21228494|ref|NP_634416.1| - 4.6e-112 374.7 0.0 5.5e-112 374.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|21228494|ref|NP_634416.1| - 2.2e-19 70.2 0.1 4.4e-19 69.2 0.1 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain 4HBT PF03061.22 gi|21228495|ref|NP_634417.1| - 8.5e-09 35.7 0.0 1.7e-08 34.7 0.0 1.5 1 1 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|21228495|ref|NP_634417.1| - 2.5e-08 34.4 0.0 3.3e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|21228495|ref|NP_634417.1| - 0.0012 18.2 0.0 0.049 12.9 0.0 2.0 2 0 0 2 2 2 2 Acyl-ACP thioesterase LSPR PF06049.12 gi|21228495|ref|NP_634417.1| - 1.4 9.1 4.0 39 4.7 0.0 3.4 3 0 0 3 3 3 0 Coagulation Factor V LSPD Repeat Cupin_2 PF07883.11 gi|21228496|ref|NP_634418.1| - 4.4e-16 58.4 0.6 6.8e-16 57.7 0.6 1.2 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.22 gi|21228496|ref|NP_634418.1| - 6.8e-11 42.1 0.3 9.8e-11 41.6 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|21228496|ref|NP_634418.1| - 1.8e-10 41.0 0.6 3.1e-10 40.3 0.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|21228496|ref|NP_634418.1| - 5.7e-07 29.9 0.0 9.2e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_19 PF12844.7 gi|21228496|ref|NP_634418.1| - 1.1e-06 28.5 0.0 2e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 gi|21228496|ref|NP_634418.1| - 0.00011 22.1 1.0 0.00014 21.8 0.2 1.6 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|21228496|ref|NP_634418.1| - 0.00038 20.1 0.0 0.00061 19.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) HTH_25 PF13413.6 gi|21228496|ref|NP_634418.1| - 0.0014 18.4 1.3 0.0028 17.5 1.4 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain MannoseP_isomer PF01050.18 gi|21228496|ref|NP_634418.1| - 0.035 14.0 0.0 0.052 13.4 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Oxidored_FMN PF00724.20 gi|21228497|ref|NP_634419.1| - 8.9e-74 248.8 0.0 1e-73 248.6 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family His_biosynth PF00977.21 gi|21228497|ref|NP_634419.1| - 0.0002 20.9 0.0 0.00052 19.5 0.0 1.7 1 1 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|21228497|ref|NP_634419.1| - 0.00025 20.3 0.0 0.00043 19.5 0.0 1.4 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|21228497|ref|NP_634419.1| - 0.017 14.5 0.1 0.028 13.8 0.1 1.3 1 0 0 1 1 1 0 Nitronate monooxygenase TA_inhibitor PF17574.2 gi|21228497|ref|NP_634419.1| - 0.033 14.2 0.1 6.8 6.8 0.0 2.4 2 0 0 2 2 2 0 Inhibitor of toxin/antitoxin system (Gp4.5) Cytochrom_C_asm PF01578.20 gi|21228498|ref|NP_634420.1| - 8.2e-28 97.6 12.8 8.2e-28 97.6 12.8 1.9 2 0 0 2 2 2 1 Cytochrome C assembly protein DUF2681 PF10883.8 gi|21228498|ref|NP_634420.1| - 0.76 10.2 0.1 0.76 10.2 0.1 3.3 4 1 1 5 5 5 0 Protein of unknown function (DUF2681) CcmB PF03379.13 gi|21228499|ref|NP_634421.1| - 1.5e-35 122.7 15.1 1.8e-35 122.4 15.1 1.0 1 0 0 1 1 1 1 CcmB protein ABC2_membrane PF01061.24 gi|21228499|ref|NP_634421.1| - 2.1e-13 50.2 14.6 3.3e-13 49.6 14.6 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 gi|21228499|ref|NP_634421.1| - 1.8e-09 37.3 18.2 1.2e-08 34.6 18.2 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|21228499|ref|NP_634421.1| - 4e-08 32.8 15.8 4e-08 32.8 15.8 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|21228499|ref|NP_634421.1| - 0.00017 21.6 16.3 0.0006 19.8 16.4 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|21228499|ref|NP_634421.1| - 0.018 14.6 16.9 0.033 13.8 16.8 1.5 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|21228500|ref|NP_634422.1| - 1.6e-32 112.9 0.0 2.1e-32 112.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21228500|ref|NP_634422.1| - 2.6e-10 40.6 2.6 1.9e-05 24.6 0.5 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|21228500|ref|NP_634422.1| - 2.4e-06 28.2 0.6 4.7e-06 27.3 0.7 1.5 1 1 0 1 1 1 1 AAA domain AAA_27 PF13514.6 gi|21228500|ref|NP_634422.1| - 4.6e-06 26.4 0.3 0.00051 19.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_13 PF13166.6 gi|21228500|ref|NP_634422.1| - 0.00035 19.4 0.0 0.00041 19.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|21228500|ref|NP_634422.1| - 0.00038 20.2 0.1 0.00068 19.3 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATPase_2 PF01637.18 gi|21228500|ref|NP_634422.1| - 0.00051 20.0 0.0 0.00064 19.7 0.0 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_15 PF13175.6 gi|21228500|ref|NP_634422.1| - 0.0018 18.0 0.1 0.0069 16.1 0.1 1.6 1 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|21228500|ref|NP_634422.1| - 0.002 18.4 0.3 0.0072 16.6 0.3 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|21228500|ref|NP_634422.1| - 0.0062 17.0 0.1 0.03 14.8 0.1 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|21228500|ref|NP_634422.1| - 0.0075 16.0 0.0 0.019 14.7 0.0 1.5 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|21228500|ref|NP_634422.1| - 0.011 15.2 0.0 0.08 12.4 0.0 1.9 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 gi|21228500|ref|NP_634422.1| - 0.015 15.1 0.0 0.039 13.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|21228500|ref|NP_634422.1| - 0.02 14.5 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|21228500|ref|NP_634422.1| - 0.021 15.2 0.1 0.037 14.4 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain NTPase_1 PF03266.15 gi|21228500|ref|NP_634422.1| - 0.029 14.3 0.0 0.044 13.7 0.0 1.3 1 0 0 1 1 1 0 NTPase AAA_28 PF13521.6 gi|21228500|ref|NP_634422.1| - 0.032 14.5 0.0 0.046 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|21228500|ref|NP_634422.1| - 0.034 14.1 0.1 0.062 13.2 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase Rad17 PF03215.15 gi|21228500|ref|NP_634422.1| - 0.036 14.0 0.0 0.053 13.4 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain cobW PF02492.19 gi|21228500|ref|NP_634422.1| - 0.076 12.6 0.0 0.2 11.3 0.0 1.7 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 gi|21228500|ref|NP_634422.1| - 0.11 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 gi|21228500|ref|NP_634422.1| - 0.13 12.8 0.2 0.28 11.7 0.2 1.8 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|21228500|ref|NP_634422.1| - 0.13 12.1 0.0 0.31 10.9 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Adeno_IVa2 PF02456.15 gi|21228500|ref|NP_634422.1| - 0.14 10.9 0.0 0.19 10.5 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein DUF3584 PF12128.8 gi|21228500|ref|NP_634422.1| - 0.16 9.5 0.0 0.21 9.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) PMSR PF01625.21 gi|21228501|ref|NP_634423.1| - 7.7e-66 221.0 0.6 1e-65 220.6 0.6 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase PBP PF01161.20 gi|21228502|ref|NP_634424.1| - 4.6e-33 114.3 0.0 5.8e-33 114.0 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein YhfH PF14149.6 gi|21228503|ref|NP_634425.1| - 0.0083 16.1 0.3 0.0083 16.1 0.3 2.2 1 1 1 2 2 2 1 YhfH-like protein DZR PF12773.7 gi|21228503|ref|NP_634425.1| - 0.036 14.1 1.8 0.067 13.2 1.8 1.4 1 1 0 1 1 1 0 Double zinc ribbon zf-B_box PF00643.24 gi|21228503|ref|NP_634425.1| - 0.058 13.6 1.6 0.079 13.1 1.6 1.2 1 0 0 1 1 1 0 B-box zinc finger PolC_DP2 PF03833.13 gi|21228503|ref|NP_634425.1| - 0.075 10.9 0.4 0.063 11.1 0.4 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Zn-ribbon_8 PF09723.10 gi|21228503|ref|NP_634425.1| - 0.11 12.7 4.2 2.3 8.4 0.1 2.4 1 1 1 2 2 2 0 Zinc ribbon domain DUF2256 PF10013.9 gi|21228503|ref|NP_634425.1| - 0.31 11.2 3.4 0.49 10.6 0.3 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) zinc_ribbon_2 PF13240.6 gi|21228503|ref|NP_634425.1| - 0.92 9.3 6.4 2.5 7.9 6.4 1.7 1 1 0 1 1 1 0 zinc-ribbon domain NRDD PF13597.6 gi|21228503|ref|NP_634425.1| - 1.1 7.9 3.2 1.4 7.7 3.2 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase DUF362 PF04015.12 gi|21228504|ref|NP_634426.1| - 8.9e-33 114.2 0.0 1.1e-32 113.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) MazE_antitoxin PF04014.18 gi|21228504|ref|NP_634426.1| - 0.1 12.5 0.0 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin TrkA_C PF02080.21 gi|21228505|ref|NP_634427.1| - 4.5e-26 90.5 0.1 1.5e-12 47.2 0.0 2.5 2 0 0 2 2 2 2 TrkA-C domain PhoU PF01895.19 gi|21228505|ref|NP_634427.1| - 3.2e-19 69.2 16.8 2.9e-11 43.7 6.4 2.8 2 1 1 3 3 3 2 PhoU domain DUF4363 PF14276.6 gi|21228505|ref|NP_634427.1| - 0.22 11.7 2.2 0.24 11.5 0.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) MgtE PF01769.16 gi|21228506|ref|NP_634428.1| - 2.9e-19 69.7 11.0 2.9e-19 69.7 11.0 1.6 2 0 0 2 2 2 1 Divalent cation transporter DUF485 PF04341.12 gi|21228506|ref|NP_634428.1| - 0.92 9.5 6.5 2.3 8.2 6.5 1.7 1 0 0 1 1 1 0 Protein of unknown function, DUF485 MgtE PF01769.16 gi|21228507|ref|NP_634429.1| - 7.6e-20 71.5 9.9 7.6e-20 71.5 9.9 1.8 2 0 0 2 2 2 1 Divalent cation transporter CRCB PF02537.15 gi|21228507|ref|NP_634429.1| - 0.24 11.8 7.8 0.53 10.6 7.8 1.7 1 1 0 1 1 1 0 CrcB-like protein, Camphor Resistance (CrcB) DUF4118 PF13493.6 gi|21228507|ref|NP_634429.1| - 3.1 7.6 16.4 1.4 8.8 13.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4118) Spore_YhaL PF14147.6 gi|21228510|ref|NP_634432.1| - 0.15 11.7 0.1 2.3 8.0 0.0 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL Reprolysin_5 PF13688.6 gi|21228511|ref|NP_634433.1| - 1.3e-21 77.7 9.9 2.2e-21 76.9 9.9 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 SWI2_SNF2 PF18766.1 gi|21228511|ref|NP_634433.1| - 0.003 17.3 0.5 0.0048 16.6 0.5 1.3 1 0 0 1 1 1 1 SWI2/SNF2 ATPase Reprolysin_3 PF13582.6 gi|21228511|ref|NP_634433.1| - 0.0068 16.9 3.2 0.0068 16.9 3.2 2.2 2 1 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like O-antigen_lig PF13425.6 gi|21228511|ref|NP_634433.1| - 0.021 13.6 1.3 0.028 13.2 1.3 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF5347 PF17282.2 gi|21228512|ref|NP_634434.1| - 0.064 13.6 0.5 0.11 12.8 0.3 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5347) ATP-gua_PtransN PF02807.15 gi|21228514|ref|NP_634436.1| - 0.077 13.4 0.0 0.18 12.2 0.0 1.6 1 1 0 1 1 1 0 ATP:guanido phosphotransferase, N-terminal domain AsnC_trans_reg PF01037.21 gi|21228518|ref|NP_634440.1| - 9.1e-11 41.6 0.2 9.6e-11 41.5 0.2 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain GYD PF08734.11 gi|21228518|ref|NP_634440.1| - 6.3e-06 26.0 0.0 7e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 GYD domain ACT_4 PF13291.6 gi|21228518|ref|NP_634440.1| - 0.049 14.2 0.1 0.53 10.9 0.1 2.0 2 0 0 2 2 2 0 ACT domain NapD PF03927.13 gi|21228518|ref|NP_634440.1| - 0.056 13.5 0.1 0.065 13.3 0.1 1.1 1 0 0 1 1 1 0 NapD protein MIase PF02426.16 gi|21228518|ref|NP_634440.1| - 0.092 12.9 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Muconolactone delta-isomerase Topo-VIb_trans PF09239.11 gi|21228519|ref|NP_634441.1| - 2.4e-66 222.4 0.0 3.9e-66 221.8 0.0 1.3 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer Top6b_C PF18000.1 gi|21228519|ref|NP_634441.1| - 1.1e-46 157.7 0.1 2e-46 156.9 0.1 1.5 1 0 0 1 1 1 1 Type 2 DNA topoisomerase 6 subunit B C-terminal domain HATPase_c PF02518.26 gi|21228519|ref|NP_634441.1| - 5.3e-11 43.0 0.0 2e-10 41.2 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|21228519|ref|NP_634441.1| - 2.7e-07 30.5 0.0 6.3e-07 29.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FbpA PF05833.11 gi|21228519|ref|NP_634441.1| - 0.016 14.0 0.7 0.026 13.3 0.0 1.7 2 0 0 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) MAF_flag10 PF01973.18 gi|21228519|ref|NP_634441.1| - 0.016 14.9 0.0 0.038 13.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function DUF115 HATPase_c_5 PF14501.6 gi|21228519|ref|NP_634441.1| - 0.09 12.7 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 GHKL domain TP6A_N PF04406.14 gi|21228520|ref|NP_634442.1| - 4.4e-14 52.2 0.2 9.8e-14 51.1 0.2 1.6 1 0 0 1 1 1 1 Type IIB DNA topoisomerase BtpA PF03437.15 gi|21228520|ref|NP_634442.1| - 0.17 11.3 0.0 0.25 10.8 0.0 1.2 1 0 0 1 1 1 0 BtpA family DNA_gyraseB PF00204.25 gi|21228521|ref|NP_634443.1| - 2.1e-64 216.2 1.0 3.2e-64 215.6 1.0 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|21228521|ref|NP_634443.1| - 2.6e-31 107.6 0.1 5.9e-31 106.5 0.1 1.7 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|21228521|ref|NP_634443.1| - 2.7e-21 76.2 0.1 6.4e-21 75.0 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|21228521|ref|NP_634443.1| - 1.6e-18 66.8 0.0 4.2e-18 65.5 0.0 1.8 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 gi|21228521|ref|NP_634443.1| - 0.0028 17.5 0.2 0.0078 16.0 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_topoisoIV PF00521.20 gi|21228522|ref|NP_634444.1| - 3e-159 530.5 0.6 4e-159 530.1 0.6 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|21228522|ref|NP_634444.1| - 1.1e-76 252.1 13.1 1.2e-14 53.5 0.1 6.6 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller TraG-D_C PF12696.7 gi|21228522|ref|NP_634444.1| - 0.71 9.9 0.0 0.71 9.9 0.0 2.2 2 0 0 2 2 2 0 TraM recognition site of TraD and TraG TFB6 PF17110.5 gi|21228522|ref|NP_634444.1| - 7.1 6.3 9.3 54 3.5 0.0 2.6 2 0 0 2 2 2 0 Subunit 11 of the general transcription factor TFIIH Na_trans_assoc PF06512.13 gi|21228522|ref|NP_634444.1| - 9.3 6.5 15.3 18 5.5 15.3 1.4 1 0 0 1 1 1 0 Sodium ion transport-associated HATPase_c_3 PF13589.6 gi|21228523|ref|NP_634445.1| - 2.1e-12 47.0 0.0 5e-12 45.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|21228523|ref|NP_634445.1| - 7.6e-09 36.1 0.0 6.4e-08 33.1 0.0 2.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HD PF01966.22 gi|21228523|ref|NP_634445.1| - 0.0026 18.0 1.0 0.022 15.0 1.0 2.6 1 1 0 1 1 1 1 HD domain PDEase_I PF00233.19 gi|21228523|ref|NP_634445.1| - 0.0083 15.9 1.2 0.013 15.2 0.1 1.9 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase YqaH PF17448.2 gi|21228523|ref|NP_634445.1| - 0.033 14.5 0.1 0.12 12.7 0.1 2.0 1 0 0 1 1 1 0 Uncharacterized YqaH-like YdjM PF04307.14 gi|21228524|ref|NP_634446.1| - 1.5e-18 66.7 7.5 2.1e-18 66.2 7.5 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Sod_Fe_C PF02777.18 gi|21228525|ref|NP_634447.1| - 2.8e-33 114.1 0.1 5.4e-33 113.2 0.1 1.5 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|21228525|ref|NP_634447.1| - 3.7e-27 94.6 1.5 6.3e-27 93.9 1.5 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain YdjM PF04307.14 gi|21228526|ref|NP_634448.1| - 5.7e-20 71.3 4.9 3.4e-19 68.8 4.9 2.0 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF4184 PF13803.6 gi|21228526|ref|NP_634448.1| - 0.028 14.1 0.6 0.052 13.2 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4184) YdjM PF04307.14 gi|21228527|ref|NP_634449.1| - 2.1e-18 66.2 5.4 3e-18 65.7 5.4 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DLH PF01738.18 gi|21228528|ref|NP_634450.1| - 9.2e-34 116.9 0.0 5.2e-31 107.9 0.0 2.1 1 1 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 gi|21228528|ref|NP_634450.1| - 1.3e-10 41.1 0.0 3.2e-06 26.8 0.0 2.5 2 1 1 3 3 3 2 Prolyl oligopeptidase family Chlorophyllase2 PF12740.7 gi|21228528|ref|NP_634450.1| - 5.2e-09 35.4 0.0 7.3e-09 34.9 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Chlorophyllase PF07224.11 gi|21228528|ref|NP_634450.1| - 6.1e-09 35.3 0.0 9.3e-09 34.7 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase Hydrolase_4 PF12146.8 gi|21228528|ref|NP_634450.1| - 2.3e-05 23.8 0.0 0.06 12.6 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 gi|21228528|ref|NP_634450.1| - 0.0024 17.7 0.0 0.2 11.5 0.0 2.4 1 1 1 2 2 2 1 alpha/beta hydrolase fold PAF-AH_p_II PF03403.13 gi|21228528|ref|NP_634450.1| - 0.0032 16.1 0.0 0.056 11.9 0.0 2.0 1 1 1 2 2 2 1 Platelet-activating factor acetylhydrolase, isoform II Abhydrolase_1 PF00561.20 gi|21228528|ref|NP_634450.1| - 0.0079 15.9 0.0 0.75 9.4 0.0 2.1 1 1 1 2 2 2 1 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|21228528|ref|NP_634450.1| - 0.024 14.6 0.0 0.1 12.5 0.0 1.9 1 1 2 3 3 3 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_6 PF12697.7 gi|21228528|ref|NP_634450.1| - 0.09 13.4 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family URO-D PF01208.17 gi|21228529|ref|NP_634451.1| - 8.5e-66 222.5 0.0 9.6e-66 222.3 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) B12-binding PF02310.19 gi|21228530|ref|NP_634452.1| - 2.5e-18 66.3 0.5 4.1e-18 65.6 0.5 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|21228530|ref|NP_634452.1| - 1.5e-10 41.3 0.1 5.1e-10 39.7 0.0 2.0 2 0 0 2 2 2 1 B12 binding domain UPF0180 PF03698.13 gi|21228530|ref|NP_634452.1| - 0.073 13.2 0.1 0.17 12.1 0.1 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) DUF563 PF04577.14 gi|21228530|ref|NP_634452.1| - 0.24 11.5 0.0 0.37 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF563) DASH_Spc19 PF08287.11 gi|21228531|ref|NP_634453.1| - 0.025 14.5 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Spc19 SlyX PF04102.12 gi|21228531|ref|NP_634453.1| - 0.036 14.7 0.1 0.054 14.1 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.11 gi|21228531|ref|NP_634453.1| - 0.22 11.3 0.4 0.22 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.14 gi|21228532|ref|NP_634454.1| - 2.5e-73 247.0 0.0 2.9e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21228532|ref|NP_634454.1| - 4.8e-10 39.7 6.7 1.3e-09 38.2 6.7 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21228532|ref|NP_634454.1| - 0.00015 22.0 1.1 0.62 10.3 0.0 3.0 2 1 1 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|21228532|ref|NP_634454.1| - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) zf-RING_5 PF14634.6 gi|21228532|ref|NP_634454.1| - 0.34 10.9 7.9 1 9.4 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21228532|ref|NP_634454.1| - 1.2 10.0 7.5 0.17 12.6 2.9 2.0 2 0 0 2 2 2 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|21228532|ref|NP_634454.1| - 1.3 9.7 5.2 31 5.3 0.5 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PAP2 PF01569.21 gi|21228533|ref|NP_634455.1| - 1.2e-14 54.3 0.2 1.2e-14 54.3 0.2 2.1 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|21228533|ref|NP_634455.1| - 1.1e-12 48.0 0.0 2.7e-12 46.8 0.0 1.6 1 0 0 1 1 1 1 PAP2 superfamily TctB PF07331.11 gi|21228533|ref|NP_634455.1| - 5.8 7.2 14.4 0.55 10.5 1.9 2.5 2 1 0 2 2 2 0 Tripartite tricarboxylate transporter TctB family SOR_SNZ PF01680.17 gi|21228534|ref|NP_634456.1| - 2.1e-104 347.8 8.8 3.1e-104 347.2 8.8 1.2 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|21228534|ref|NP_634456.1| - 6.7e-11 42.0 12.1 6.3e-08 32.2 2.6 2.7 2 2 0 2 2 2 2 Thiazole biosynthesis protein ThiG DUF561 PF04481.12 gi|21228534|ref|NP_634456.1| - 0.001 18.3 0.4 0.031 13.4 0.0 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF561) ABC_sub_bind PF04392.12 gi|21228534|ref|NP_634456.1| - 0.0012 18.2 0.6 0.0012 18.2 0.6 1.7 2 0 0 2 2 2 1 ABC transporter substrate binding protein Dus PF01207.17 gi|21228534|ref|NP_634456.1| - 0.0016 17.6 1.8 0.18 10.9 0.1 2.5 2 1 0 2 2 2 2 Dihydrouridine synthase (Dus) NanE PF04131.14 gi|21228534|ref|NP_634456.1| - 0.0016 17.6 4.8 0.014 14.6 0.2 2.9 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.21 gi|21228534|ref|NP_634456.1| - 0.0022 17.2 0.2 0.062 12.5 0.0 2.3 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase NMO PF03060.15 gi|21228534|ref|NP_634456.1| - 0.005 16.3 8.9 0.0056 16.1 0.8 2.3 2 0 0 2 2 2 1 Nitronate monooxygenase OMPdecase PF00215.24 gi|21228534|ref|NP_634456.1| - 0.0058 16.2 0.7 0.54 9.8 0.0 2.4 1 1 1 2 2 2 1 Orotidine 5'-phosphate decarboxylase / HUMPS family TetR_C_27 PF17935.1 gi|21228534|ref|NP_634456.1| - 0.0088 16.1 0.0 0.034 14.2 0.0 1.9 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain IMPDH PF00478.25 gi|21228534|ref|NP_634456.1| - 0.012 14.7 0.6 0.017 14.1 0.6 1.4 1 1 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Cucumopine_C PF18631.1 gi|21228534|ref|NP_634456.1| - 0.021 14.7 0.0 0.042 13.8 0.0 1.5 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain His_biosynth PF00977.21 gi|21228534|ref|NP_634456.1| - 0.037 13.5 0.4 0.24 10.8 0.0 2.1 2 0 0 2 2 2 0 Histidine biosynthesis protein P_C10 PF14974.6 gi|21228534|ref|NP_634456.1| - 0.13 12.4 1.1 0.45 10.6 0.1 2.4 3 0 0 3 3 3 0 Protein C10 MCM_lid PF17855.1 gi|21228534|ref|NP_634456.1| - 0.16 12.4 0.7 7.3 7.1 0.0 2.7 2 1 1 3 3 3 0 MCM AAA-lid domain SNO PF01174.19 gi|229021091|ref|NP_634457.2| - 4.8e-53 179.8 0.0 5.4e-53 179.6 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|229021091|ref|NP_634457.2| - 1.1e-11 44.7 0.1 2e-11 43.9 0.1 1.5 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|229021091|ref|NP_634457.2| - 1.8e-10 40.9 0.4 3e-09 36.9 0.4 2.1 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_S51 PF03575.17 gi|229021091|ref|NP_634457.2| - 6.7e-10 39.0 0.0 8.3e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Peptidase family S51 BPL_N PF09825.9 gi|229021091|ref|NP_634457.2| - 0.0011 18.1 0.0 0.0024 17.0 0.0 1.5 2 0 0 2 2 2 1 Biotin-protein ligase, N terminal DJ-1_PfpI PF01965.24 gi|229021091|ref|NP_634457.2| - 0.01 15.7 1.1 0.02 14.7 0.6 1.6 1 1 1 2 2 2 0 DJ-1/PfpI family Peptidase_C26 PF07722.13 gi|229021091|ref|NP_634457.2| - 0.043 13.6 0.2 0.38 10.5 0.2 2.4 2 1 0 2 2 2 0 Peptidase C26 MTES_1575 PF18741.1 gi|21228536|ref|NP_634458.1| - 0.08 13.1 0.2 0.1 12.8 0.2 1.2 1 0 0 1 1 1 0 REase_MTES_1575 PAS_4 PF08448.10 gi|21228537|ref|NP_634459.1| - 3.7e-44 149.5 0.0 4.1e-11 43.1 0.0 5.4 5 0 0 5 5 5 5 PAS fold PAS_9 PF13426.7 gi|21228537|ref|NP_634459.1| - 2.3e-35 121.0 0.9 9.3e-18 64.4 0.0 5.8 5 0 0 5 5 5 4 PAS domain PAS_3 PF08447.12 gi|21228537|ref|NP_634459.1| - 1.3e-32 111.9 0.1 1.5e-15 57.3 0.0 5.2 5 0 0 5 5 5 4 PAS fold PAS PF00989.25 gi|21228537|ref|NP_634459.1| - 3.4e-32 110.8 0.0 2.2e-14 53.4 0.0 5.6 5 0 0 5 5 5 4 PAS fold HisKA_2 PF07568.12 gi|21228537|ref|NP_634459.1| - 1.8e-27 95.2 2.9 1.8e-27 95.2 2.9 2.5 3 0 0 3 3 3 1 Histidine kinase PAS_8 PF13188.7 gi|21228537|ref|NP_634459.1| - 3.6e-24 84.3 0.0 2.9e-06 27.2 0.0 5.2 5 0 0 5 5 5 3 PAS domain HATPase_c PF02518.26 gi|21228537|ref|NP_634459.1| - 7e-09 36.2 0.2 3.2e-08 34.1 0.2 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.7 gi|21228537|ref|NP_634459.1| - 4.2e-08 33.3 0.1 1.1 9.4 0.0 5.7 5 0 0 5 5 5 1 PAS fold PAS_10 PF13596.6 gi|21228537|ref|NP_634459.1| - 2.8e-05 24.7 0.1 1 10.0 0.0 4.8 4 1 0 4 4 4 1 PAS domain HATPase_c_2 PF13581.6 gi|21228537|ref|NP_634459.1| - 0.00016 21.6 0.0 0.00044 20.2 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|21228537|ref|NP_634459.1| - 0.0061 17.2 0.2 0.0061 17.2 0.2 2.9 3 0 0 3 3 3 1 HWE histidine kinase YkyA PF10368.9 gi|21228537|ref|NP_634459.1| - 0.0099 15.6 0.7 0.0099 15.6 0.7 3.0 3 0 0 3 3 2 1 Putative cell-wall binding lipoprotein ZNRF_3_ecto PF18212.1 gi|21228537|ref|NP_634459.1| - 0.011 15.7 2.5 27 4.8 0.0 4.6 5 0 0 5 5 5 0 ZNRF-3 Ectodomain Atg14 PF10186.9 gi|21228537|ref|NP_634459.1| - 0.057 12.5 2.1 0.15 11.1 2.1 1.7 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Phage_Arf PF17585.2 gi|21228537|ref|NP_634459.1| - 0.061 13.3 0.1 0.17 11.8 0.1 1.7 1 0 0 1 1 1 0 Accessory recombination function protein DUF5344 PF17279.2 gi|21228537|ref|NP_634459.1| - 0.32 11.6 6.1 0.54 10.9 2.5 2.9 2 0 0 2 2 2 0 Family of unknown function (DUF5344) Prefoldin PF02996.17 gi|21228537|ref|NP_634459.1| - 2.1 8.3 6.8 11 6.0 2.0 3.4 3 0 0 3 3 3 0 Prefoldin subunit OmpH PF03938.14 gi|21228537|ref|NP_634459.1| - 3.4 8.0 13.3 0.28 11.5 1.1 3.6 4 0 0 4 4 3 0 Outer membrane protein (OmpH-like) DDE_Tnp_IS66 PF03050.14 gi|21228538|ref|NP_634460.1| - 1.4e-74 251.1 0.0 1.6e-74 250.9 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21228538|ref|NP_634460.1| - 2.4e-10 40.6 4.9 7e-10 39.2 4.9 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21228538|ref|NP_634460.1| - 1.5e-05 25.2 5.1 0.027 14.7 0.3 3.0 2 1 1 3 3 3 2 DDE domain zf-RING_7 PF02591.15 gi|21228538|ref|NP_634460.1| - 0.031 14.5 0.1 0.031 14.5 0.1 2.0 2 0 0 2 2 1 0 C4-type zinc ribbon domain DZR PF12773.7 gi|21228538|ref|NP_634460.1| - 0.041 13.9 1.7 0.18 11.8 0.9 2.5 2 0 0 2 2 2 0 Double zinc ribbon Lar_restr_allev PF14354.6 gi|21228538|ref|NP_634460.1| - 0.074 13.4 0.2 0.074 13.4 0.2 3.0 3 0 0 3 3 3 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.6 gi|21228538|ref|NP_634460.1| - 0.11 12.2 5.8 2.9 7.7 0.2 2.8 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21228538|ref|NP_634460.1| - 0.12 12.5 3.6 2.1 8.6 3.6 2.8 1 1 0 1 1 1 0 Zinc ribbon domain DUF725 PF05267.12 gi|21228538|ref|NP_634460.1| - 0.16 12.0 2.5 0.47 10.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF725) zf-RING_5 PF14634.6 gi|21228538|ref|NP_634460.1| - 0.98 9.4 0.0 0.98 9.4 0.0 3.3 3 1 0 3 3 3 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21228538|ref|NP_634460.1| - 1 10.1 6.6 0.17 12.7 1.0 2.4 2 1 0 2 2 2 0 zinc-ribbon family Mut7-C PF01927.16 gi|21228538|ref|NP_634460.1| - 1.6 8.8 5.5 0.41 10.8 2.0 1.8 2 0 0 2 2 2 0 Mut7-C RNAse domain zf-ribbon_3 PF13248.6 gi|21228538|ref|NP_634460.1| - 5.9 6.4 8.0 3.9 7.0 0.2 3.0 3 0 0 3 3 3 0 zinc-ribbon domain Putative_PNPOx PF01243.20 gi|21228540|ref|NP_634462.1| - 2.4e-16 59.7 0.0 2.9e-16 59.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|21228540|ref|NP_634462.1| - 0.0073 15.9 0.0 0.0095 15.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Y1_Tnp PF01797.16 gi|21228541|ref|NP_634463.1| - 1.1e-35 122.3 1.5 1.4e-35 122.0 1.5 1.1 1 0 0 1 1 1 1 Transposase IS200 like PKD_3 PF16820.5 gi|21228542|ref|NP_634464.1| - 0.0048 16.6 2.0 1.5 8.6 0.1 3.1 2 1 1 3 3 3 3 PKD-like domain PPC PF04151.15 gi|21228542|ref|NP_634464.1| - 0.0069 17.5 1.8 0.0087 17.1 0.6 1.8 2 0 0 2 2 2 1 Bacterial pre-peptidase C-terminal domain HTH_24 PF13412.6 gi|21228543|ref|NP_634465.1| - 5.5e-19 67.5 0.4 8.8e-10 38.0 0.6 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|21228543|ref|NP_634465.1| - 1e-11 44.7 0.0 9.3e-06 25.6 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.20 gi|21228543|ref|NP_634465.1| - 1.2e-09 37.9 0.0 0.001 18.9 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|21228543|ref|NP_634465.1| - 2.6e-08 33.7 0.2 0.00069 19.5 0.2 2.4 2 0 0 2 2 2 2 HTH domain HTH_Crp_2 PF13545.6 gi|21228543|ref|NP_634465.1| - 4.9e-06 26.4 0.0 0.0013 18.7 0.0 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_36 PF13730.6 gi|21228543|ref|NP_634465.1| - 7e-06 25.9 0.4 0.17 11.8 0.0 3.2 3 0 0 3 3 3 2 Helix-turn-helix domain HTH_41 PF14502.6 gi|21228543|ref|NP_634465.1| - 9.5e-06 25.2 0.0 0.028 14.1 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain MarR PF01047.22 gi|21228543|ref|NP_634465.1| - 1.1e-05 25.3 0.1 0.2 11.6 0.0 2.8 3 0 0 3 3 2 2 MarR family HTH_38 PF13936.6 gi|21228543|ref|NP_634465.1| - 1.1e-05 25.1 0.2 0.049 13.4 0.2 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain FaeA PF04703.12 gi|21228543|ref|NP_634465.1| - 1.5e-05 25.3 0.4 0.17 12.3 0.1 2.3 2 0 0 2 2 2 2 FaeA-like protein GerE PF00196.19 gi|21228543|ref|NP_634465.1| - 2.2e-05 23.9 0.3 0.17 11.4 0.1 2.7 2 0 0 2 2 2 2 Bacterial regulatory proteins, luxR family HTH_34 PF13601.6 gi|21228543|ref|NP_634465.1| - 3.6e-05 23.8 0.1 0.049 13.8 0.0 2.4 2 0 0 2 2 2 2 Winged helix DNA-binding domain HTH_28 PF13518.6 gi|21228543|ref|NP_634465.1| - 4.3e-05 23.5 0.0 0.061 13.5 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.7 gi|21228543|ref|NP_634465.1| - 5.5e-05 23.0 0.0 0.43 10.5 0.0 2.3 2 0 0 2 2 2 2 MarR family Penicillinase_R PF03965.16 gi|21228543|ref|NP_634465.1| - 6.4e-05 23.3 0.3 0.034 14.5 0.0 2.3 1 1 1 2 2 2 1 Penicillinase repressor HTH_IclR PF09339.10 gi|21228543|ref|NP_634465.1| - 8e-05 22.4 0.0 0.14 12.0 0.0 2.5 3 0 0 3 3 2 2 IclR helix-turn-helix domain TrmB PF01978.19 gi|21228543|ref|NP_634465.1| - 8.4e-05 22.4 0.1 0.0024 17.7 0.0 2.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HrcA_DNA-bdg PF03444.15 gi|21228543|ref|NP_634465.1| - 0.00022 20.8 0.2 0.7 9.6 0.0 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Sigma70_r4 PF04545.16 gi|21228543|ref|NP_634465.1| - 0.00037 19.9 0.0 1.1 8.8 0.0 3.0 2 1 1 3 3 3 2 Sigma-70, region 4 TetR_N PF00440.23 gi|21228543|ref|NP_634465.1| - 0.00063 19.5 0.0 0.23 11.3 0.0 2.6 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Sigma70_r4_2 PF08281.12 gi|21228543|ref|NP_634465.1| - 0.0013 18.4 0.0 0.12 12.1 0.0 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 MerR_1 PF13411.6 gi|21228543|ref|NP_634465.1| - 0.0021 18.1 0.3 0.46 10.6 0.1 2.3 2 0 0 2 2 2 1 MerR HTH family regulatory protein NUMOD1 PF07453.13 gi|21228543|ref|NP_634465.1| - 0.006 16.8 2.0 4.1 7.8 0.0 3.5 3 1 0 3 3 3 1 NUMOD1 domain HTH_AsnC-type PF13404.6 gi|21228543|ref|NP_634465.1| - 0.0074 16.1 0.0 0.79 9.6 0.0 2.4 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_10 PF04967.12 gi|21228543|ref|NP_634465.1| - 0.0074 16.1 0.0 2.6 7.9 0.0 2.5 2 0 0 2 2 2 1 HTH DNA binding domain HTH_17 PF12728.7 gi|21228543|ref|NP_634465.1| - 0.0079 16.4 0.4 3.4 7.9 0.1 2.7 3 0 0 3 3 2 1 Helix-turn-helix domain GntR PF00392.21 gi|21228543|ref|NP_634465.1| - 0.011 15.4 0.0 0.46 10.2 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family RepL PF05732.11 gi|21228543|ref|NP_634465.1| - 0.014 14.8 0.4 0.043 13.2 0.1 1.8 1 1 1 2 2 2 0 Firmicute plasmid replication protein (RepL) Mrr_N PF14338.6 gi|21228543|ref|NP_634465.1| - 0.026 14.7 0.1 0.061 13.5 0.1 1.6 1 0 0 1 1 1 0 Mrr N-terminal domain HTH_3 PF01381.22 gi|21228543|ref|NP_634465.1| - 0.029 14.4 0.1 0.11 12.5 0.0 2.1 2 1 1 3 3 1 0 Helix-turn-helix HTH_29 PF13551.6 gi|21228543|ref|NP_634465.1| - 0.039 14.0 0.1 3.8 7.6 0.0 2.5 2 1 0 2 2 2 0 Winged helix-turn helix HTH_45 PF14947.6 gi|21228543|ref|NP_634465.1| - 0.054 13.5 2.6 0.58 10.2 0.1 2.8 2 1 1 3 3 3 0 Winged helix-turn-helix Fe_dep_repress PF01325.19 gi|21228543|ref|NP_634465.1| - 0.055 13.7 0.0 1.4 9.2 0.0 2.3 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_40 PF14493.6 gi|21228543|ref|NP_634465.1| - 0.057 13.9 0.1 2 8.9 0.0 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|21228543|ref|NP_634465.1| - 0.075 12.9 0.0 13 5.7 0.0 2.4 2 0 0 2 2 2 0 Homeodomain-like domain LolA_like PF17131.4 gi|21228545|ref|NP_634467.1| - 5.8e-09 35.9 0.3 8.4e-09 35.4 0.3 1.3 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein AA_permease_2 PF13520.6 gi|21228546|ref|NP_634468.1| - 0.087 11.6 5.7 0.11 11.3 5.7 1.1 1 0 0 1 1 1 0 Amino acid permease DUF347 PF03988.12 gi|21228546|ref|NP_634468.1| - 0.22 11.8 0.0 0.22 11.8 0.0 3.0 3 0 0 3 3 3 0 Repeat of Unknown Function (DUF347) DUF2678 PF10856.8 gi|21228546|ref|NP_634468.1| - 0.36 10.8 5.6 0.32 10.9 3.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2678) DUF2070 PF09843.9 gi|21228546|ref|NP_634468.1| - 0.41 8.9 5.0 0.52 8.5 5.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) LSR PF05624.14 gi|21228546|ref|NP_634468.1| - 0.51 10.4 0.1 0.51 10.4 0.1 2.4 4 0 0 4 4 4 0 Lipolysis stimulated receptor (LSR) UbiA PF01040.18 gi|21228546|ref|NP_634468.1| - 0.52 9.6 6.7 0.15 11.3 0.5 2.0 1 1 1 2 2 2 0 UbiA prenyltransferase family DUF4191 PF13829.6 gi|21228546|ref|NP_634468.1| - 3.7 6.8 9.2 0.31 10.3 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) DsbD PF02683.15 gi|21228547|ref|NP_634469.1| - 1.1e-20 74.4 21.7 1.5e-20 74.1 21.7 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Thioredoxin_3 PF13192.6 gi|21228547|ref|NP_634469.1| - 0.047 13.7 0.2 0.12 12.5 0.0 1.7 1 1 1 2 2 2 0 Thioredoxin domain UPF0270 PF06794.12 gi|21228547|ref|NP_634469.1| - 0.052 13.6 2.1 0.091 12.8 2.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) RNR_N PF08343.10 gi|21228547|ref|NP_634469.1| - 0.35 10.9 1.8 0.63 10.1 1.8 1.4 1 0 0 1 1 1 0 Ribonucleotide reductase N-terminal DUF4131 PF13567.6 gi|21228547|ref|NP_634469.1| - 4.9 6.8 8.3 8.7 6.0 0.4 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) HTH_24 PF13412.6 gi|21228548|ref|NP_634470.1| - 7e-19 67.1 0.1 1.7e-10 40.3 0.1 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|21228548|ref|NP_634470.1| - 7.9e-10 38.7 0.0 0.00023 21.2 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_11 PF08279.12 gi|21228548|ref|NP_634470.1| - 7.3e-08 32.2 0.1 0.017 15.1 0.0 2.5 2 0 0 2 2 2 2 HTH domain HTH_5 PF01022.20 gi|21228548|ref|NP_634470.1| - 7.4e-08 32.1 0.0 0.0083 16.0 0.0 2.6 3 0 0 3 3 2 2 Bacterial regulatory protein, arsR family HTH_36 PF13730.6 gi|21228548|ref|NP_634470.1| - 4.3e-07 29.8 0.0 0.0038 17.1 0.0 2.5 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_IclR PF09339.10 gi|21228548|ref|NP_634470.1| - 7.1e-06 25.7 0.0 0.044 13.6 0.0 2.2 2 0 0 2 2 2 2 IclR helix-turn-helix domain TrmB PF01978.19 gi|21228548|ref|NP_634470.1| - 2.9e-05 23.8 0.0 0.0091 15.9 0.0 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB GerE PF00196.19 gi|21228548|ref|NP_634470.1| - 3.5e-05 23.3 0.6 0.024 14.2 0.2 2.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family FaeA PF04703.12 gi|21228548|ref|NP_634470.1| - 0.00017 21.9 0.3 0.61 10.5 0.1 2.4 2 0 0 2 2 2 2 FaeA-like protein HTH_28 PF13518.6 gi|21228548|ref|NP_634470.1| - 0.00026 21.0 0.0 0.39 10.9 0.0 2.5 2 0 0 2 2 2 2 Helix-turn-helix domain RepL PF05732.11 gi|21228548|ref|NP_634470.1| - 0.00031 20.2 1.2 0.007 15.8 0.8 2.4 2 0 0 2 2 2 1 Firmicute plasmid replication protein (RepL) MarR_2 PF12802.7 gi|21228548|ref|NP_634470.1| - 0.00034 20.4 0.0 1.1 9.2 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_41 PF14502.6 gi|21228548|ref|NP_634470.1| - 0.00066 19.3 0.0 0.17 11.6 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|21228548|ref|NP_634470.1| - 0.0015 18.9 0.4 0.07 13.5 0.0 2.5 1 1 1 2 2 2 1 Penicillinase repressor Rrf2 PF02082.20 gi|21228548|ref|NP_634470.1| - 0.0022 18.3 0.0 4.5 7.7 0.0 3.3 3 1 0 3 3 3 1 Transcriptional regulator HTH_10 PF04967.12 gi|21228548|ref|NP_634470.1| - 0.0024 17.7 0.0 3.5 7.5 0.0 2.6 2 0 0 2 2 2 2 HTH DNA binding domain HTH_34 PF13601.6 gi|21228548|ref|NP_634470.1| - 0.0031 17.7 0.0 3.3 7.9 0.1 2.4 2 0 0 2 2 2 2 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|21228548|ref|NP_634470.1| - 0.0033 17.4 0.0 0.46 10.5 0.0 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MerR_1 PF13411.6 gi|21228548|ref|NP_634470.1| - 0.004 17.2 0.5 0.93 9.6 0.1 2.4 2 0 0 2 2 2 1 MerR HTH family regulatory protein HTH_AsnC-type PF13404.6 gi|21228548|ref|NP_634470.1| - 0.0077 16.0 0.0 3.6 7.5 0.0 2.5 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|21228548|ref|NP_634470.1| - 0.015 14.9 0.0 1.7 8.4 0.0 2.7 2 0 0 2 2 2 0 Sigma-70, region 4 MarR PF01047.22 gi|21228548|ref|NP_634470.1| - 0.016 15.1 0.0 0.42 10.6 0.0 2.4 2 0 0 2 2 2 0 MarR family HTH_38 PF13936.6 gi|21228548|ref|NP_634470.1| - 0.018 14.8 0.1 1.9 8.3 0.1 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain TetR_N PF00440.23 gi|21228548|ref|NP_634470.1| - 0.02 14.7 0.0 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_23 PF13384.6 gi|21228548|ref|NP_634470.1| - 0.022 14.5 0.0 1.5 8.8 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain Mrr_N PF14338.6 gi|21228548|ref|NP_634470.1| - 0.03 14.5 0.1 0.079 13.1 0.1 1.7 1 0 0 1 1 1 0 Mrr N-terminal domain HTH_45 PF14947.6 gi|21228548|ref|NP_634470.1| - 0.033 14.2 1.7 0.7 9.9 0.1 2.8 2 1 1 3 3 3 0 Winged helix-turn-helix HTH_17 PF12728.7 gi|21228548|ref|NP_634470.1| - 0.046 13.9 0.2 1.9 8.7 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|21228548|ref|NP_634470.1| - 0.051 13.6 0.0 6 7.0 0.0 2.9 3 0 0 3 3 3 0 Winged helix-turn helix LacI PF00356.21 gi|21228548|ref|NP_634470.1| - 0.053 13.3 0.2 3.7 7.4 0.0 3.4 5 0 0 5 5 3 0 Bacterial regulatory proteins, lacI family B-block_TFIIIC PF04182.12 gi|21228548|ref|NP_634470.1| - 0.06 13.5 1.8 18 5.5 0.0 3.4 3 0 0 3 3 3 0 B-block binding subunit of TFIIIC Fe_dep_repress PF01325.19 gi|21228548|ref|NP_634470.1| - 0.071 13.3 0.0 0.49 10.6 0.0 2.2 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain TBPIP PF07106.13 gi|21228548|ref|NP_634470.1| - 0.12 12.4 1.7 0.41 10.6 0.3 2.5 3 0 0 3 3 2 0 TBPIP/Hop2 winged helix domain AlgF PF11182.8 gi|21228548|ref|NP_634470.1| - 0.12 12.2 0.1 0.23 11.2 0.1 1.5 1 0 0 1 1 1 0 Alginate O-acetyl transferase AlgF HTH_32 PF13565.6 gi|21228549|ref|NP_634471.1| - 2e-13 50.8 0.3 4.2e-12 46.5 0.1 2.1 1 1 1 2 2 2 2 Homeodomain-like domain HTH_23 PF13384.6 gi|21228549|ref|NP_634471.1| - 1e-11 44.3 0.2 2.4e-11 43.1 0.2 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 gi|21228549|ref|NP_634471.1| - 1.5e-08 34.5 0.1 2.7e-08 33.7 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.6 gi|21228549|ref|NP_634471.1| - 3.7e-06 26.9 0.0 7.1e-06 26.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|21228549|ref|NP_634471.1| - 9.5e-05 22.2 1.8 0.045 13.6 0.3 2.3 1 1 1 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_7 PF02796.15 gi|21228549|ref|NP_634471.1| - 0.0053 16.8 0.3 0.027 14.6 0.2 2.3 1 1 1 2 2 2 1 Helix-turn-helix domain of resolvase PAX PF00292.18 gi|21228549|ref|NP_634471.1| - 0.027 14.4 0.0 0.032 14.2 0.0 1.2 1 0 0 1 1 1 0 'Paired box' domain HTH_5 PF01022.20 gi|21228549|ref|NP_634471.1| - 0.035 14.0 0.0 0.092 12.6 0.0 1.7 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family GerE PF00196.19 gi|21228549|ref|NP_634471.1| - 0.056 13.0 0.1 0.1 12.2 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_36 PF13730.6 gi|21228549|ref|NP_634471.1| - 0.092 12.7 0.1 0.24 11.4 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_terminase PF10668.9 gi|21228549|ref|NP_634471.1| - 0.095 12.7 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 Phage terminase small subunit Clathrin_lg_ch PF01086.17 gi|21228549|ref|NP_634471.1| - 0.11 12.5 0.2 0.19 11.7 0.2 1.3 1 0 0 1 1 1 0 Clathrin light chain HTH_38 PF13936.6 gi|21228549|ref|NP_634471.1| - 0.16 11.7 0.3 0.16 11.7 0.3 1.9 2 1 0 2 2 2 0 Helix-turn-helix domain DDE_3 PF13358.6 gi|21228550|ref|NP_634472.1| - 1.4e-29 102.7 0.1 1.9e-29 102.3 0.1 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease HSF_DNA-bind PF00447.17 gi|21228551|ref|NP_634473.1| - 0.081 13.5 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 HSF-type DNA-binding Transposase_mut PF00872.18 gi|21228552|ref|NP_634474.1| - 2.3e-113 378.9 2.6 2.8e-113 378.6 2.6 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|21228552|ref|NP_634474.1| - 7.6e-10 39.1 0.0 2.1e-09 37.7 0.0 1.8 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|21228552|ref|NP_634474.1| - 9.2e-05 22.0 1.1 0.00031 20.3 1.1 1.8 1 1 0 1 1 1 1 Transposase IS66 family DDE_Tnp_ISL3 PF01610.17 gi|21228552|ref|NP_634474.1| - 0.0023 17.7 1.5 0.033 13.9 0.2 2.4 2 1 1 3 3 3 1 Transposase DDE_Tnp_IS240 PF13610.6 gi|21228552|ref|NP_634474.1| - 0.0029 17.8 3.4 0.055 13.7 2.8 2.6 1 1 1 2 2 2 1 DDE domain Dynein_light PF01221.18 gi|21228552|ref|NP_634474.1| - 0.063 13.6 0.9 0.22 11.9 0.6 2.1 2 0 0 2 2 2 0 Dynein light chain type 1 DsbD PF02683.15 gi|21228554|ref|NP_634476.1| - 1.6e-11 44.5 11.5 1.6e-11 44.5 11.5 1.6 2 0 0 2 2 2 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|21228554|ref|NP_634476.1| - 9.4e-05 22.4 32.1 0.0012 18.8 9.0 2.1 1 1 1 2 2 2 2 Cytochrome C biogenesis protein transmembrane region Thioredoxin_3 PF13192.6 gi|21228554|ref|NP_634476.1| - 0.00019 21.4 0.4 0.00036 20.5 0.1 1.6 1 1 1 2 2 2 1 Thioredoxin domain Thioredoxin PF00085.20 gi|21228554|ref|NP_634476.1| - 0.0097 15.9 0.1 0.016 15.2 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin UPF0270 PF06794.12 gi|21228554|ref|NP_634476.1| - 0.05 13.7 2.1 0.087 12.9 2.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) Glutaredoxin PF00462.24 gi|21228554|ref|NP_634476.1| - 0.07 13.4 0.0 0.17 12.1 0.0 1.6 1 0 0 1 1 1 0 Glutaredoxin DUF836 PF05768.14 gi|21228554|ref|NP_634476.1| - 0.14 12.6 0.2 0.27 11.7 0.1 1.5 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) RNR_N PF08343.10 gi|21228554|ref|NP_634476.1| - 0.32 11.1 1.8 0.61 10.2 1.8 1.5 1 0 0 1 1 1 0 Ribonucleotide reductase N-terminal DUF4131 PF13567.6 gi|21228554|ref|NP_634476.1| - 1.2 8.8 6.0 5 6.7 2.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) Yip1 PF04893.17 gi|21228555|ref|NP_634477.1| - 1.5e-33 115.9 16.5 1.9e-33 115.6 16.5 1.1 1 0 0 1 1 1 1 Yip1 domain DUF1282 PF06930.12 gi|21228555|ref|NP_634477.1| - 0.091 12.5 17.2 0.26 11.1 17.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1282) DUF1418 PF07214.12 gi|21228555|ref|NP_634477.1| - 1.2 9.0 8.9 0.14 12.0 3.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1418) DUF2207 PF09972.9 gi|21228555|ref|NP_634477.1| - 1.5 7.5 12.8 0.54 9.0 2.8 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) CPBP PF02517.16 gi|21228555|ref|NP_634477.1| - 6.4 7.2 13.2 2.4 8.6 4.8 2.4 2 0 0 2 2 2 0 CPBP intramembrane metalloprotease ABC2_membrane PF01061.24 gi|21228556|ref|NP_634478.1| - 2e-36 125.4 23.9 2e-36 125.4 23.9 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|21228556|ref|NP_634478.1| - 7.6e-10 38.4 32.9 9.7e-10 38.1 32.9 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|21228556|ref|NP_634478.1| - 2.3e-07 30.4 20.4 3e-07 30.0 20.4 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|21228557|ref|NP_634479.1| - 1.4e-32 113.0 0.0 2.5e-32 112.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21228557|ref|NP_634479.1| - 8.7e-10 38.9 1.6 1.8e-05 24.7 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|21228557|ref|NP_634479.1| - 1.7e-08 35.1 0.0 3.6e-08 34.0 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|21228557|ref|NP_634479.1| - 1.4e-05 25.7 0.0 2.3e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|21228557|ref|NP_634479.1| - 3.7e-05 23.6 0.0 0.21 11.3 0.0 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|21228557|ref|NP_634479.1| - 6e-05 22.7 0.1 0.00011 21.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|21228557|ref|NP_634479.1| - 0.00022 20.9 0.9 0.0018 17.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain SRP54 PF00448.22 gi|21228557|ref|NP_634479.1| - 0.046 13.3 0.0 0.23 11.1 0.0 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain RsgA_GTPase PF03193.16 gi|21228557|ref|NP_634479.1| - 0.052 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 gi|21228557|ref|NP_634479.1| - 0.055 13.9 0.0 0.59 10.6 0.0 2.8 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|21228557|ref|NP_634479.1| - 0.058 12.8 0.0 2.9 7.3 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Chordopox_L2 PF05803.12 gi|21228557|ref|NP_634479.1| - 0.084 12.7 0.1 0.46 10.4 0.0 2.1 2 0 0 2 2 2 0 Chordopoxvirus L2 protein MobB PF03205.14 gi|21228557|ref|NP_634479.1| - 0.11 12.4 0.3 13 5.7 0.1 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 gi|21228557|ref|NP_634479.1| - 0.15 11.7 0.0 0.72 9.5 0.0 2.0 2 1 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|21228558|ref|NP_634480.1| - 1.9e-54 183.9 0.0 1.4e-28 100.1 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 gi|21228558|ref|NP_634480.1| - 1.1e-18 67.5 0.0 4.2e-16 59.2 0.0 2.4 2 0 0 2 2 2 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|21228558|ref|NP_634480.1| - 9.5e-17 61.2 0.1 1.5e-08 34.4 0.0 2.9 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|21228558|ref|NP_634480.1| - 1.3e-13 51.3 0.2 1.5e-05 25.3 0.2 3.5 2 2 0 2 2 2 2 AAA domain AAA_21 PF13304.6 gi|21228558|ref|NP_634480.1| - 4.2e-11 43.2 1.1 0.00033 20.6 0.0 4.1 4 0 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21228558|ref|NP_634480.1| - 2.4e-08 33.6 0.1 0.0016 18.2 0.0 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|21228558|ref|NP_634480.1| - 5.9e-07 30.0 0.6 0.011 16.1 0.0 2.7 3 1 0 3 3 2 2 AAA ATPase domain AAA_25 PF13481.6 gi|21228558|ref|NP_634480.1| - 1.7e-06 27.8 0.3 0.039 13.5 0.1 3.6 3 1 0 3 3 3 2 AAA domain AAA PF00004.29 gi|21228558|ref|NP_634480.1| - 1.8e-06 28.4 0.8 0.032 14.7 0.1 3.9 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|21228558|ref|NP_634480.1| - 3e-06 27.3 0.3 0.11 12.3 0.0 3.3 4 0 0 4 4 3 2 NACHT domain RsgA_GTPase PF03193.16 gi|21228558|ref|NP_634480.1| - 1e-05 25.5 0.2 0.023 14.6 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase TniB PF05621.11 gi|21228558|ref|NP_634480.1| - 1.1e-05 24.9 0.1 1.9 7.9 0.0 4.1 4 0 0 4 4 4 1 Bacterial TniB protein DUF87 PF01935.17 gi|21228558|ref|NP_634480.1| - 1.4e-05 25.3 0.5 0.0044 17.2 0.0 2.4 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_23 PF13476.6 gi|21228558|ref|NP_634480.1| - 2.2e-05 25.0 0.1 0.14 12.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|21228558|ref|NP_634480.1| - 2.3e-05 24.6 0.0 0.1 12.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.22 gi|21228558|ref|NP_634480.1| - 3.2e-05 23.3 0.2 0.26 10.4 0.1 2.4 2 0 0 2 2 2 2 NB-ARC domain IstB_IS21 PF01695.17 gi|21228558|ref|NP_634480.1| - 3.6e-05 23.6 0.9 0.66 9.7 0.0 3.9 4 0 0 4 4 4 1 IstB-like ATP binding protein APS_kinase PF01583.20 gi|21228558|ref|NP_634480.1| - 3.7e-05 23.7 0.0 0.059 13.3 0.0 2.4 2 0 0 2 2 2 2 Adenylylsulphate kinase ATPase PF06745.13 gi|21228558|ref|NP_634480.1| - 5e-05 22.8 2.9 2.8 7.2 0.0 3.2 3 0 0 3 3 3 2 KaiC Zeta_toxin PF06414.12 gi|21228558|ref|NP_634480.1| - 6.2e-05 22.4 0.0 0.0064 15.8 0.0 2.2 2 0 0 2 2 2 1 Zeta toxin PRK PF00485.18 gi|21228558|ref|NP_634480.1| - 7.4e-05 22.6 0.0 0.048 13.4 0.0 2.3 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family AAA_5 PF07728.14 gi|21228558|ref|NP_634480.1| - 9.1e-05 22.5 0.1 0.8 9.7 0.0 3.3 4 0 0 4 4 2 2 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|21228558|ref|NP_634480.1| - 0.00015 21.2 0.0 0.32 10.3 0.0 2.7 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI CLP1_P PF16575.5 gi|21228558|ref|NP_634480.1| - 0.00027 20.8 0.1 0.001 18.9 0.0 1.9 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop T2SSE PF00437.20 gi|21228558|ref|NP_634480.1| - 0.0003 19.9 0.1 0.047 12.8 0.0 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_24 PF13479.6 gi|21228558|ref|NP_634480.1| - 0.00045 20.0 0.2 0.4 10.4 0.1 2.3 2 0 0 2 2 2 1 AAA domain PhoH PF02562.16 gi|21228558|ref|NP_634480.1| - 0.001 18.6 0.0 1.5 8.2 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein CbiA PF01656.23 gi|21228558|ref|NP_634480.1| - 0.0011 19.1 0.5 0.65 10.1 0.2 2.5 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_7 PF12775.7 gi|21228558|ref|NP_634480.1| - 0.0011 18.5 0.0 1.4 8.4 0.0 2.3 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_18 PF13238.6 gi|21228558|ref|NP_634480.1| - 0.0012 19.4 0.0 2.1 8.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain DEAD PF00270.29 gi|21228558|ref|NP_634480.1| - 0.0012 18.6 1.0 0.98 9.2 0.0 3.3 2 2 0 2 2 2 1 DEAD/DEAH box helicase MMR_HSR1 PF01926.23 gi|21228558|ref|NP_634480.1| - 0.0013 18.8 0.1 0.49 10.5 0.0 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase MobB PF03205.14 gi|21228558|ref|NP_634480.1| - 0.0021 17.9 0.1 0.74 9.7 0.0 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.6 gi|21228558|ref|NP_634480.1| - 0.0024 17.6 0.9 0.63 9.7 0.0 3.1 4 0 0 4 4 3 1 AAA domain RNA_helicase PF00910.22 gi|21228558|ref|NP_634480.1| - 0.0029 18.0 0.0 0.79 10.1 0.0 2.5 2 0 0 2 2 2 1 RNA helicase NTPase_1 PF03266.15 gi|21228558|ref|NP_634480.1| - 0.0035 17.3 1.7 2.8 7.8 0.1 2.8 3 0 0 3 3 2 2 NTPase SRP54 PF00448.22 gi|21228558|ref|NP_634480.1| - 0.0042 16.7 0.4 0.13 11.8 0.0 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Sigma54_activat PF00158.26 gi|21228558|ref|NP_634480.1| - 0.0047 16.7 0.3 1.6 8.4 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain TrwB_AAD_bind PF10412.9 gi|21228558|ref|NP_634480.1| - 0.005 15.8 0.1 1.3 7.8 0.0 2.4 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain Rad17 PF03215.15 gi|21228558|ref|NP_634480.1| - 0.0059 16.6 0.1 1.2 9.1 0.0 2.8 4 0 0 4 4 2 1 Rad17 P-loop domain AAA_14 PF13173.6 gi|21228558|ref|NP_634480.1| - 0.008 16.2 0.1 4.6 7.3 0.0 3.6 3 1 0 4 4 4 0 AAA domain AAA_15 PF13175.6 gi|21228558|ref|NP_634480.1| - 0.013 15.3 0.0 1.4 8.5 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain ATP-synt_ab PF00006.25 gi|21228558|ref|NP_634480.1| - 0.015 14.9 0.0 5.6 6.6 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Pox_A32 PF04665.12 gi|21228558|ref|NP_634480.1| - 0.021 14.3 0.0 2.5 7.5 0.0 2.4 2 0 0 2 2 2 0 Poxvirus A32 protein FtsK_SpoIIIE PF01580.18 gi|21228558|ref|NP_634480.1| - 0.023 14.1 0.1 1.1 8.6 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family ABC_ATPase PF09818.9 gi|21228558|ref|NP_634480.1| - 0.041 12.7 5.3 8.1 5.1 0.0 4.1 4 1 0 4 4 4 0 Predicted ATPase of the ABC class RecA PF00154.21 gi|21228558|ref|NP_634480.1| - 0.041 13.3 0.5 2.4 7.5 0.1 2.6 2 0 0 2 2 2 0 recA bacterial DNA recombination protein ResIII PF04851.15 gi|21228558|ref|NP_634480.1| - 0.042 13.9 0.0 5 7.1 0.0 2.2 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit TsaE PF02367.17 gi|21228558|ref|NP_634480.1| - 0.045 13.7 0.1 4.1 7.4 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Roc PF08477.13 gi|21228558|ref|NP_634480.1| - 0.058 13.6 0.1 16 5.8 0.0 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase TIP49 PF06068.13 gi|21228558|ref|NP_634480.1| - 0.062 12.5 0.1 2.1 7.5 0.0 2.2 2 0 0 2 2 2 0 TIP49 P-loop domain ATP_bind_1 PF03029.17 gi|21228558|ref|NP_634480.1| - 0.062 13.1 0.5 7.1 6.3 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_19 PF13245.6 gi|21228558|ref|NP_634480.1| - 0.063 13.6 0.2 8.1 6.8 0.0 2.8 3 0 0 3 3 2 0 AAA domain ATPase_2 PF01637.18 gi|21228558|ref|NP_634480.1| - 0.072 13.0 0.0 9.5 6.1 0.0 2.6 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Cytidylate_kin PF02224.18 gi|21228558|ref|NP_634480.1| - 0.079 12.7 0.0 6.5 6.4 0.0 2.5 2 0 0 2 2 2 0 Cytidylate kinase DUF2075 PF09848.9 gi|21228558|ref|NP_634480.1| - 0.095 11.9 0.1 6.9 5.8 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) cobW PF02492.19 gi|21228558|ref|NP_634480.1| - 0.13 11.8 0.6 14 5.2 0.0 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain dNK PF01712.19 gi|21228558|ref|NP_634480.1| - 0.23 11.3 0.7 0.75 9.6 0.0 2.0 2 0 0 2 2 2 0 Deoxynucleoside kinase SbcCD_C PF13558.6 gi|21228558|ref|NP_634480.1| - 0.24 11.7 1.2 38 4.6 0.2 3.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit BPD_transp_1 PF00528.22 gi|21228559|ref|NP_634481.1| - 2.5e-26 92.6 11.5 2.5e-26 92.6 11.5 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|21228559|ref|NP_634481.1| - 0.0024 17.8 0.9 0.0024 17.8 0.9 4.5 5 1 0 5 5 5 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|21228560|ref|NP_634482.1| - 6.7e-39 133.5 11.1 6.7e-39 133.5 11.1 1.7 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Methyltransf_25 PF13649.6 gi|21228561|ref|NP_634483.1| - 3.3e-14 53.4 0.0 6.8e-14 52.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21228561|ref|NP_634483.1| - 1e-11 45.3 0.0 2e-11 44.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21228561|ref|NP_634483.1| - 5.7e-09 36.0 0.0 9.6e-09 35.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|21228561|ref|NP_634483.1| - 6.5e-08 32.2 0.0 1.1e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_31 PF13847.6 gi|21228561|ref|NP_634483.1| - 2.3e-07 30.8 0.0 3.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21228561|ref|NP_634483.1| - 2.5e-07 31.3 0.0 6e-07 30.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|21228561|ref|NP_634483.1| - 2.2e-06 27.0 0.0 2.8e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.14 gi|21228561|ref|NP_634483.1| - 2.9e-06 26.9 0.0 4.3e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|21228561|ref|NP_634483.1| - 4.9e-06 26.3 0.0 6.8e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.13 gi|21228561|ref|NP_634483.1| - 5.4e-05 22.7 0.0 8.3e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 gi|21228561|ref|NP_634483.1| - 0.00018 20.9 0.0 0.00023 20.6 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.7 gi|21228561|ref|NP_634483.1| - 0.00018 21.4 0.0 0.00028 20.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|21228561|ref|NP_634483.1| - 0.00046 19.6 0.0 0.00081 18.8 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family FtsJ PF01728.19 gi|21228561|ref|NP_634483.1| - 0.00085 19.5 0.0 0.0014 18.7 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase DREV PF05219.12 gi|21228561|ref|NP_634483.1| - 0.0033 16.6 0.0 0.0053 15.9 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase MetW PF07021.12 gi|21228561|ref|NP_634483.1| - 0.013 15.2 0.0 0.03 13.9 0.0 1.7 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltr_RsmB-F PF01189.17 gi|21228561|ref|NP_634483.1| - 0.12 11.9 0.0 0.28 10.8 0.0 1.5 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_32 PF13679.6 gi|21228561|ref|NP_634483.1| - 0.14 12.1 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain SBP_bac_5 PF00496.22 gi|21228562|ref|NP_634484.1| - 1.4e-84 284.3 0.0 1.7e-84 284.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF4083 PF13314.6 gi|21228563|ref|NP_634485.1| - 0.88 9.6 6.3 0.18 11.8 0.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) Ribosomal_S6e PF01092.19 gi|21228564|ref|NP_634486.1| - 2.2e-41 140.7 0.1 2.5e-41 140.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.27 gi|21228565|ref|NP_634487.1| - 5.4e-33 114.2 0.2 4.7e-31 107.9 0.2 2.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D4 PF14578.6 gi|21228565|ref|NP_634487.1| - 4.9e-30 103.3 2.5 4.9e-30 103.3 2.5 2.4 3 0 0 3 3 3 1 Elongation factor Tu domain 4 IF-2 PF11987.8 gi|21228565|ref|NP_634487.1| - 1.5e-22 79.7 5.1 5.4e-22 77.9 0.5 3.0 3 0 0 3 3 3 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|21228565|ref|NP_634487.1| - 4.6e-13 49.4 5.7 4.3e-10 39.9 0.1 2.8 2 0 0 2 2 2 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|21228565|ref|NP_634487.1| - 1.3e-08 34.9 0.2 3.9e-08 33.4 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 gi|21228565|ref|NP_634487.1| - 0.0033 17.2 0.0 0.011 15.6 0.0 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein DUF1908 PF08926.11 gi|21228565|ref|NP_634487.1| - 0.019 14.1 0.0 0.03 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) Dynamin_N PF00350.23 gi|21228565|ref|NP_634487.1| - 0.032 14.3 0.0 0.92 9.5 0.0 2.6 2 0 0 2 2 2 0 Dynamin family PduV-EutP PF10662.9 gi|21228565|ref|NP_634487.1| - 0.049 13.4 0.0 0.5 10.1 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation cobW PF02492.19 gi|21228565|ref|NP_634487.1| - 0.1 12.2 0.0 10 5.6 0.0 2.8 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 gi|21228565|ref|NP_634487.1| - 0.13 12.5 0.0 0.46 10.7 0.0 2.0 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase NDK PF00334.19 gi|21228566|ref|NP_634488.1| - 1e-55 187.4 0.0 1.2e-55 187.2 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.20 gi|21228567|ref|NP_634489.1| - 2.4e-19 69.3 1.2 2.5e-19 69.3 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e YHS PF04945.13 gi|21228567|ref|NP_634489.1| - 8.5e-05 22.6 2.2 0.00012 22.1 2.2 1.2 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.14 gi|21228567|ref|NP_634489.1| - 0.056 13.4 3.8 0.083 12.8 3.8 1.3 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif VATC PF18716.1 gi|21228567|ref|NP_634489.1| - 0.17 11.7 4.8 0.31 10.9 4.8 1.5 1 1 0 1 1 1 0 Vms1-associating treble clef domain Ribosomal_S28e PF01200.18 gi|21228568|ref|NP_634490.1| - 3.4e-28 97.4 0.6 3.7e-28 97.3 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.26 gi|21228569|ref|NP_634491.1| - 3.6e-26 90.7 0.8 4.2e-26 90.5 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|21228569|ref|NP_634491.1| - 0.0018 18.2 0.0 0.0027 17.6 0.0 1.3 1 0 0 1 1 1 1 PELOTA RNA binding domain Radical_SAM PF04055.21 gi|21228570|ref|NP_634492.1| - 7.1e-21 75.3 0.1 8.3e-21 75.1 0.1 1.1 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|21228570|ref|NP_634492.1| - 2.7e-08 34.0 0.0 5.4e-08 33.0 0.0 1.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain WD40 PF00400.32 gi|21228571|ref|NP_634493.1| - 3.9e-25 87.6 15.8 0.047 14.6 0.0 8.5 8 0 0 8 8 8 7 WD domain, G-beta repeat PQQ PF01011.21 gi|21228571|ref|NP_634493.1| - 9.4e-22 75.9 21.0 0.00018 21.3 0.1 7.3 7 0 0 7 7 7 5 PQQ enzyme repeat PQQ_3 PF13570.6 gi|21228571|ref|NP_634493.1| - 3.2e-21 75.2 20.3 4e-06 27.2 0.1 8.6 9 0 0 9 9 8 4 PQQ-like domain PQQ_2 PF13360.6 gi|21228571|ref|NP_634493.1| - 4e-20 72.4 9.5 2.1e-09 37.3 0.7 2.7 1 1 2 3 3 3 3 PQQ-like domain ANAPC4_WD40 PF12894.7 gi|21228571|ref|NP_634493.1| - 1.6e-12 47.6 0.0 0.008 16.5 0.0 5.4 1 1 5 6 6 6 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 gi|21228571|ref|NP_634493.1| - 4.6e-06 26.2 0.1 0.21 10.9 0.4 3.7 3 1 0 3 3 3 2 WD40-like domain eIF2A PF08662.11 gi|21228571|ref|NP_634493.1| - 0.00017 21.5 0.3 0.02 14.8 0.0 3.1 1 1 2 3 3 3 1 Eukaryotic translation initiation factor eIF2A HPS3_N PF14761.6 gi|21228571|ref|NP_634493.1| - 0.0034 17.0 0.0 0.024 14.2 0.0 2.3 2 0 0 2 2 2 1 Hermansky-Pudlak syndrome 3 VID27 PF08553.10 gi|21228571|ref|NP_634493.1| - 0.033 13.3 0.0 0.2 10.7 0.0 2.3 2 0 0 2 2 2 0 VID27 C-terminal WD40-like domain Ge1_WD40 PF16529.5 gi|21228571|ref|NP_634493.1| - 0.14 11.1 1.9 12 4.8 0.0 3.8 4 1 1 5 5 5 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Cytochrom_D1 PF02239.16 gi|21228571|ref|NP_634493.1| - 0.2 10.1 4.7 0.14 10.7 0.3 2.4 2 1 0 3 3 3 0 Cytochrome D1 heme domain PKD PF00801.20 gi|21228572|ref|NP_634494.1| - 2.5e-146 475.8 97.5 4.6e-16 58.4 3.1 13.1 13 0 0 13 13 12 12 PKD domain Lactonase PF10282.9 gi|21228572|ref|NP_634494.1| - 1.7e-32 113.0 13.8 3.9e-08 32.9 0.3 7.8 2 2 5 7 7 7 7 Lactonase, 7-bladed beta-propeller PKD_3 PF16820.5 gi|21228572|ref|NP_634494.1| - 2.5e-25 88.0 40.1 0.06 13.1 0.1 12.4 12 0 0 12 12 12 10 PKD-like domain Cytochrom_D1 PF02239.16 gi|21228572|ref|NP_634494.1| - 6.1e-21 74.4 13.7 2.6e-06 26.2 0.3 5.7 2 2 2 5 5 5 4 Cytochrome D1 heme domain NHL PF01436.21 gi|21228572|ref|NP_634494.1| - 7e-17 60.5 22.8 1.1 9.4 0.0 12.4 12 0 0 12 12 12 5 NHL repeat SGL PF08450.12 gi|21228572|ref|NP_634494.1| - 1.2e-15 57.8 21.2 1.3e-06 28.2 3.4 8.1 3 2 3 6 6 6 5 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 gi|21228572|ref|NP_634494.1| - 1.3e-13 51.0 22.0 0.25 11.6 0.0 12.3 5 2 8 13 13 13 2 Arylesterase ChitinaseA_N PF08329.10 gi|21228572|ref|NP_634494.1| - 5.1e-12 45.6 18.0 1.4 8.5 0.0 11.0 11 1 2 13 13 12 4 Chitinase A, N-terminal domain PD40 PF07676.12 gi|21228572|ref|NP_634494.1| - 8.3e-12 44.7 0.0 11 6.1 0.0 10.2 10 0 0 10 10 10 0 WD40-like Beta Propeller Repeat MG2 PF01835.19 gi|21228572|ref|NP_634494.1| - 1.1e-07 32.2 40.0 2.5 8.6 0.1 12.2 9 3 3 12 12 12 2 MG2 domain SBP56 PF05694.11 gi|21228572|ref|NP_634494.1| - 2.5e-06 26.6 0.1 2.8 6.7 0.0 5.7 4 2 3 7 7 7 2 56kDa selenium binding protein (SBP56) DUF4221 PF13970.6 gi|21228572|ref|NP_634494.1| - 2.6e-05 24.0 0.0 7.2 6.1 0.0 5.1 2 2 2 5 5 5 1 Domain of unknown function (DUF4221) Str_synth PF03088.16 gi|21228572|ref|NP_634494.1| - 3.2e-05 24.0 0.5 38 4.5 0.0 7.8 6 2 4 10 10 9 0 Strictosidine synthase ThaI PF15514.6 gi|21228572|ref|NP_634494.1| - 0.0002 21.1 2.7 6.6 6.3 0.0 5.1 4 2 1 5 5 5 1 Restriction endonuclease ThaI Svf1 PF08622.10 gi|21228572|ref|NP_634494.1| - 0.0005 20.2 6.3 4.7 7.2 0.1 5.6 3 2 3 6 6 6 1 Svf1-like N-terminal lipocalin domain P_proprotein PF01483.20 gi|21228572|ref|NP_634494.1| - 0.0059 16.6 0.3 80 3.4 0.0 6.2 5 0 0 5 5 5 0 Proprotein convertase P-domain Biotin_carb_N PF00289.22 gi|21228572|ref|NP_634494.1| - 0.15 12.6 2.1 61 4.2 0.0 4.5 5 0 0 5 5 4 0 Biotin carboxylase, N-terminal domain Kunitz_legume PF00197.18 gi|21228572|ref|NP_634494.1| - 0.86 9.5 6.4 1.2e+02 2.6 0.0 5.9 6 1 1 7 7 6 0 Trypsin and protease inhibitor DUF4213 PF13938.6 gi|21228572|ref|NP_634494.1| - 1.2 9.4 3.7 23 5.3 0.2 3.7 3 1 1 4 4 3 0 Putative heavy-metal chelation V-set PF07686.17 gi|21228572|ref|NP_634494.1| - 3.2 8.0 25.1 19 5.5 0.0 9.8 12 0 0 12 12 12 0 Immunoglobulin V-set domain SoxZ PF08770.11 gi|21228572|ref|NP_634494.1| - 7.5 6.4 19.0 40 4.1 0.0 8.8 11 1 1 12 12 11 0 Sulphur oxidation protein SoxZ NosD PF05048.13 gi|21228573|ref|NP_634495.1| - 1.2e-66 224.4 63.9 1.3e-49 168.7 28.7 2.8 1 1 2 3 3 3 3 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21228573|ref|NP_634495.1| - 7e-24 84.5 55.8 1.8e-14 53.9 19.0 3.5 2 2 1 3 3 3 2 Right handed beta helix region DPPIV_rep PF18811.1 gi|21228573|ref|NP_634495.1| - 6.9 6.7 7.1 6.5 6.8 0.9 3.3 3 0 0 3 3 3 0 Dipeptidyl peptidase IV (DPP IV) low complexity region Polbeta PF18765.1 gi|21228574|ref|NP_634496.1| - 7.9e-21 74.0 0.0 1.2e-20 73.4 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|21228574|ref|NP_634496.1| - 1.8e-11 44.1 2.2 7.1e-10 39.1 0.1 2.1 1 1 1 2 2 2 2 Nucleotidyltransferase domain UspB PF10625.9 gi|21228574|ref|NP_634496.1| - 0.031 14.3 0.1 0.05 13.6 0.1 1.4 1 0 0 1 1 1 0 Universal stress protein B (UspB) DUF86 PF01934.17 gi|21228575|ref|NP_634497.1| - 1e-24 86.6 0.0 1.2e-24 86.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Acetyltransf_3 PF13302.7 gi|21228576|ref|NP_634498.1| - 2.2e-23 83.5 0.0 2.5e-23 83.3 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21228576|ref|NP_634498.1| - 7.8e-10 39.0 0.0 1e-09 38.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|21228576|ref|NP_634498.1| - 2e-09 37.7 0.2 2.2e-09 37.6 0.2 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|21228576|ref|NP_634498.1| - 1.5e-06 27.9 0.0 2.1e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain SpoVT_C PF15714.5 gi|21228576|ref|NP_634498.1| - 0.035 14.2 0.0 0.058 13.5 0.0 1.4 1 0 0 1 1 1 0 Stage V sporulation protein T C-terminal, transcription factor VAPB_antitox PF02697.14 gi|21228577|ref|NP_634499.1| - 5.6e-18 65.5 3.5 6.9e-18 65.2 3.5 1.0 1 0 0 1 1 1 1 Putative antitoxin RHH_1 PF01402.21 gi|21228577|ref|NP_634499.1| - 0.28 11.2 2.4 0.69 9.9 0.2 2.1 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family Acetyltransf_3 PF13302.7 gi|21228578|ref|NP_634500.1| - 1.2e-13 51.9 0.1 1.5e-13 51.6 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|21228578|ref|NP_634500.1| - 2.2e-08 34.4 0.2 2.5e-08 34.2 0.2 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|21228578|ref|NP_634500.1| - 1.1e-05 25.2 0.0 1.3e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21228578|ref|NP_634500.1| - 0.0013 19.0 0.0 0.0014 18.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family NPCBM_assoc PF10633.9 gi|21228579|ref|NP_634501.1| - 0.0056 16.9 0.4 0.013 15.7 0.3 1.7 2 0 0 2 2 2 1 NPCBM-associated, NEW3 domain of alpha-galactosidase VWA PF00092.28 gi|21228580|ref|NP_634502.1| - 4.2e-28 98.8 0.5 3.3e-27 95.9 0.0 2.4 2 0 0 2 2 2 1 von Willebrand factor type A domain CHAP PF05257.16 gi|21228580|ref|NP_634502.1| - 3.7e-17 62.7 0.5 1.3e-16 60.9 0.5 2.0 1 0 0 1 1 1 1 CHAP domain VWA_2 PF13519.6 gi|21228580|ref|NP_634502.1| - 7.8e-13 49.0 0.0 3e-12 47.1 0.0 2.1 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|21228580|ref|NP_634502.1| - 4.3e-09 36.5 0.0 7.1e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain CobT_C PF11775.8 gi|21228580|ref|NP_634502.1| - 0.00068 19.3 0.0 0.0015 18.2 0.0 1.6 1 0 0 1 1 1 1 Cobalamin biosynthesis protein CobT VWA domain fn3 PF00041.21 gi|21228580|ref|NP_634502.1| - 0.0042 17.4 0.2 4 7.9 0.0 3.4 2 0 0 2 2 2 2 Fibronectin type III domain DUF4625 PF15418.6 gi|21228580|ref|NP_634502.1| - 0.017 15.4 2.3 11 6.3 0.0 4.3 3 1 1 4 4 4 0 Domain of unknown function (DUF4625) FpoO PF10621.9 gi|21228581|ref|NP_634503.1| - 1.5e-48 163.7 1.5 1.8e-48 163.4 1.5 1.0 1 0 0 1 1 1 1 F420H2 dehydrogenase subunit FpoO zf-C4pol PF14260.6 gi|21228581|ref|NP_634503.1| - 0.0092 16.4 0.8 0.67 10.5 0.2 2.3 1 1 1 2 2 2 1 C4-type zinc-finger of DNA polymerase delta DUF2527 PF10736.9 gi|21228581|ref|NP_634503.1| - 0.066 13.1 0.2 0.18 11.7 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) DUF4428 PF14471.6 gi|21228581|ref|NP_634503.1| - 0.11 12.4 10.2 0.4 10.7 1.5 3.3 2 2 0 2 2 2 0 Domain of unknown function (DUF4428) zf-AD PF07776.15 gi|21228581|ref|NP_634503.1| - 0.6 10.4 4.6 24 5.3 0.1 2.5 1 1 1 2 2 2 0 Zinc-finger associated domain (zf-AD) FYVE PF01363.21 gi|21228581|ref|NP_634503.1| - 0.82 9.9 7.1 1.5 9.0 4.7 2.4 2 1 1 3 3 3 0 FYVE zinc finger Proton_antipo_M PF00361.20 gi|21228582|ref|NP_634504.1| - 1.1e-69 234.9 30.3 1.1e-69 234.9 30.3 2.1 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|21228582|ref|NP_634504.1| - 0.75 9.9 6.8 0.34 11.0 0.8 3.1 2 0 0 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_M PF00361.20 gi|21228583|ref|NP_634505.1| - 2.3e-71 240.4 29.7 2.3e-71 240.4 29.7 2.0 2 0 0 2 2 2 1 Proton-conducting membrane transporter Oxidored_q5_N PF01059.17 gi|21228583|ref|NP_634505.1| - 0.016 15.3 5.2 0.016 15.3 5.2 4.6 4 1 0 5 5 5 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Proton_antipo_M PF00361.20 gi|21228584|ref|NP_634506.1| - 6.5e-73 245.5 24.6 6.5e-73 245.5 24.6 2.7 3 1 0 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|21228584|ref|NP_634506.1| - 2.1e-16 59.7 2.0 2.1e-16 59.7 2.0 3.9 4 0 0 4 4 4 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_C PF01010.19 gi|21228584|ref|NP_634506.1| - 0.38 10.3 9.3 9.5 5.8 9.3 2.7 1 1 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Oxidored_q2 PF00420.24 gi|21228585|ref|NP_634507.1| - 8.7e-25 86.4 5.7 9.7e-25 86.2 5.7 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BMC PF00936.19 gi|21228585|ref|NP_634507.1| - 0.029 14.4 0.1 0.037 14.0 0.1 1.1 1 0 0 1 1 1 0 BMC domain DUF5422 PF17459.2 gi|21228585|ref|NP_634507.1| - 0.041 14.1 1.2 0.049 13.8 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5422) Oxidored_q3 PF00499.20 gi|21228586|ref|NP_634508.1| - 7.1e-12 45.3 1.3 7.6e-12 45.2 1.3 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Oxidored_q3 PF00499.20 gi|21228587|ref|NP_634509.1| - 2.7e-20 72.6 13.1 2.7e-20 72.6 13.1 1.5 1 1 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SLATT_6 PF18169.1 gi|21228587|ref|NP_634509.1| - 0.56 9.8 5.4 0.21 11.2 3.1 1.4 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 DUF2109 PF09882.9 gi|21228587|ref|NP_634509.1| - 0.85 9.7 10.5 0.45 10.6 8.2 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2109) GPI2 PF06432.11 gi|21228587|ref|NP_634509.1| - 2.1 7.7 7.6 2.5 7.5 7.6 1.1 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase Fer4 PF00037.27 gi|21228588|ref|NP_634510.1| - 7.6e-15 54.0 10.7 3.2e-08 33.1 2.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21228588|ref|NP_634510.1| - 3e-12 46.9 6.3 5.6e-12 46.1 6.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21228588|ref|NP_634510.1| - 2.9e-10 40.1 3.7 6.1e-10 39.1 3.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21228588|ref|NP_634510.1| - 3.4e-08 33.8 4.2 7.1e-08 32.8 4.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21228588|ref|NP_634510.1| - 3.5e-08 33.4 9.1 1.2e-07 31.7 9.1 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21228588|ref|NP_634510.1| - 4.4e-08 33.1 6.6 9.7e-08 32.0 6.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21228588|ref|NP_634510.1| - 6e-08 33.5 8.4 0.0013 19.6 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|21228588|ref|NP_634510.1| - 4.7e-07 29.6 11.2 8.1e-05 22.5 3.4 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21228588|ref|NP_634510.1| - 1.5e-06 28.0 9.2 0.00016 21.6 2.1 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21228588|ref|NP_634510.1| - 6.8e-05 23.6 5.0 0.013 16.4 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|21228588|ref|NP_634510.1| - 0.00035 21.3 5.4 0.014 16.2 0.6 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|21228588|ref|NP_634510.1| - 0.0011 19.3 13.6 0.0084 16.5 2.0 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21228588|ref|NP_634510.1| - 0.0011 19.4 11.8 0.056 14.0 10.3 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21228588|ref|NP_634510.1| - 0.0015 19.0 9.9 0.0028 18.2 2.4 2.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|21228588|ref|NP_634510.1| - 0.0019 18.4 4.3 0.59 10.3 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21228588|ref|NP_634510.1| - 0.0025 18.7 19.0 0.008 17.0 2.9 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain NADHdh PF00146.21 gi|21228589|ref|NP_634511.1| - 2.1e-104 349.1 19.1 2.4e-104 348.8 19.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Complex1_49kDa PF00346.19 gi|21228590|ref|NP_634512.1| - 1e-88 297.0 1.6 4e-87 291.7 0.5 2.3 2 1 0 2 2 2 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|21228590|ref|NP_634512.1| - 6e-08 32.0 0.0 1.2e-07 31.1 0.0 1.4 2 0 0 2 2 2 1 Nickel-dependent hydrogenase Complex1_30kDa PF00329.19 gi|21228591|ref|NP_634513.1| - 5e-37 127.2 0.1 6.9e-37 126.8 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Oxidored_q6 PF01058.22 gi|21228592|ref|NP_634514.1| - 6e-24 84.3 0.0 8.7e-24 83.8 0.0 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Oxidored_q4 PF00507.19 gi|21228593|ref|NP_634515.1| - 3e-33 113.9 4.5 4.8e-33 113.3 4.5 1.3 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Fer4 PF00037.27 gi|21228594|ref|NP_634516.1| - 1.7e-12 46.6 16.8 2.5e-06 27.1 3.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21228594|ref|NP_634516.1| - 9.8e-09 35.1 14.0 9.4e-05 22.6 2.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21228594|ref|NP_634516.1| - 1.2e-08 35.0 24.8 3.4e-06 27.1 13.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21228594|ref|NP_634516.1| - 4.6e-08 33.5 13.5 0.0005 20.6 2.5 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21228594|ref|NP_634516.1| - 4.7e-08 33.0 12.4 7.4e-08 32.4 12.4 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21228594|ref|NP_634516.1| - 2.1e-07 30.7 16.6 0.0016 18.4 3.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21228594|ref|NP_634516.1| - 2.6e-07 31.5 12.7 0.0022 18.9 3.7 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|21228594|ref|NP_634516.1| - 1.4e-05 24.9 15.1 0.011 15.8 2.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21228594|ref|NP_634516.1| - 0.00069 20.1 13.7 0.029 14.9 2.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21228594|ref|NP_634516.1| - 0.0011 19.8 12.0 0.093 13.6 3.2 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21228594|ref|NP_634516.1| - 0.0012 19.0 15.2 0.0043 17.1 15.5 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21228594|ref|NP_634516.1| - 0.0016 18.9 14.2 0.02 15.3 2.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21228594|ref|NP_634516.1| - 0.006 17.4 19.4 0.17 12.9 5.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21228594|ref|NP_634516.1| - 0.061 13.5 11.7 0.12 12.6 2.5 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21228594|ref|NP_634516.1| - 0.11 13.0 15.9 0.23 12.0 2.4 2.8 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|21228594|ref|NP_634516.1| - 0.86 10.4 17.2 0.33 11.7 2.9 3.0 1 1 2 3 3 3 0 4Fe-4S single cluster domain Amino_oxidase PF01593.24 gi|21228595|ref|NP_634517.1| - 1.4e-15 57.5 0.0 2e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|21228595|ref|NP_634517.1| - 4.2e-11 42.9 0.0 1.3e-10 41.4 0.1 1.9 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|21228595|ref|NP_634517.1| - 2.2e-07 30.8 0.1 0.0047 16.5 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|21228595|ref|NP_634517.1| - 5.9e-07 28.5 0.4 0.0021 16.9 0.1 2.1 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_2 PF07992.14 gi|21228595|ref|NP_634517.1| - 6.3e-07 28.9 0.4 0.0049 16.1 0.0 3.4 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|21228595|ref|NP_634517.1| - 3.9e-05 22.9 1.5 0.00037 19.7 0.1 2.3 3 0 0 3 3 3 1 FAD binding domain Pyr_redox PF00070.27 gi|21228595|ref|NP_634517.1| - 0.00068 20.1 0.6 0.016 15.7 0.2 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|21228595|ref|NP_634517.1| - 0.027 13.8 0.1 0.054 12.8 0.1 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|21228595|ref|NP_634517.1| - 0.032 13.5 0.5 0.054 12.7 0.5 1.3 1 0 0 1 1 1 0 FAD binding domain GIDA PF01134.22 gi|21228595|ref|NP_634517.1| - 0.048 12.7 0.2 0.084 11.9 0.1 1.5 2 0 0 2 2 2 0 Glucose inhibited division protein A GMC_oxred_N PF00732.19 gi|21228595|ref|NP_634517.1| - 0.066 12.6 0.2 0.47 9.8 0.0 2.0 2 0 0 2 2 2 0 GMC oxidoreductase Thi4 PF01946.17 gi|21228595|ref|NP_634517.1| - 0.096 11.9 1.0 1.4 8.1 0.1 2.3 2 0 0 2 2 2 0 Thi4 family ApbA PF02558.16 gi|21228595|ref|NP_634517.1| - 0.13 11.9 0.1 0.27 10.9 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Radical_SAM PF04055.21 gi|21228596|ref|NP_634518.1| - 5.5e-14 52.9 0.2 3.1e-13 50.4 0.1 2.0 1 1 1 2 2 2 1 Radical SAM superfamily Radical_SAM PF04055.21 gi|21228597|ref|NP_634519.1| - 2.3e-20 73.6 0.5 4.3e-20 72.7 0.1 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Fer2 PF00111.27 gi|21228597|ref|NP_634519.1| - 0.013 15.5 0.3 0.031 14.2 0.3 1.6 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Fer4_14 PF13394.6 gi|21228597|ref|NP_634519.1| - 0.051 13.7 0.0 0.12 12.5 0.0 1.6 1 0 0 1 1 1 0 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|161485667|ref|NP_634520.2| - 1.5e-20 74.3 0.1 2.2e-20 73.7 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily CofC PF01983.16 gi|21228599|ref|NP_634521.1| - 1.4e-48 164.9 0.0 1.6e-48 164.7 0.0 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|21228599|ref|NP_634521.1| - 0.00022 21.6 0.0 0.00028 21.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.9 gi|21228599|ref|NP_634521.1| - 0.018 14.9 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2064) Lzipper-MIP1 PF14389.6 gi|21228599|ref|NP_634521.1| - 0.11 12.9 0.9 0.21 11.9 0.9 1.4 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 CTP_transf_3 PF02348.19 gi|21228599|ref|NP_634521.1| - 0.13 12.1 0.1 0.64 9.9 0.0 1.9 2 0 0 2 2 2 0 Cytidylyltransferase TetR_C_3 PF08362.11 gi|21228600|ref|NP_634522.1| - 0.0013 18.6 0.1 0.002 18.1 0.1 1.3 1 0 0 1 1 1 1 YcdC-like protein, C-terminal region Cas_Csy3 PF09615.10 gi|21228600|ref|NP_634522.1| - 0.11 11.8 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy3) FAD_binding_3 PF01494.19 gi|21228601|ref|NP_634523.1| - 6.8e-20 71.6 3.7 3.9e-18 65.8 3.7 2.8 1 1 0 1 1 1 1 FAD binding domain FAD_binding_2 PF00890.24 gi|21228601|ref|NP_634523.1| - 1.2e-11 44.3 0.8 8.4e-08 31.7 0.1 2.3 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|21228601|ref|NP_634523.1| - 7.7e-10 38.7 3.1 2.3e-09 37.1 3.0 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 gi|21228601|ref|NP_634523.1| - 9.8e-10 38.5 1.9 0.00076 19.2 0.4 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|21228601|ref|NP_634523.1| - 1.4e-08 34.2 0.1 6.4e-07 28.7 0.4 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein HI0933_like PF03486.14 gi|21228601|ref|NP_634523.1| - 5.2e-08 32.0 0.3 1.2e-07 30.9 0.1 1.6 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|21228601|ref|NP_634523.1| - 3.3e-07 30.4 0.0 1.1e-06 28.8 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|21228601|ref|NP_634523.1| - 3.8e-07 29.6 5.2 2.5e-06 27.0 0.2 2.9 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|21228601|ref|NP_634523.1| - 1.4e-05 24.4 0.5 1.9e-05 23.9 0.5 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|21228601|ref|NP_634523.1| - 9.9e-05 21.4 4.3 0.057 12.3 0.2 2.5 2 1 0 3 3 3 2 Tryptophan halogenase Thi4 PF01946.17 gi|21228601|ref|NP_634523.1| - 0.00024 20.4 0.0 0.00075 18.8 0.0 1.8 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 gi|21228601|ref|NP_634523.1| - 0.0019 17.5 0.2 0.0038 16.5 0.2 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|21228601|ref|NP_634523.1| - 0.0021 17.4 0.1 0.0033 16.8 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|21228601|ref|NP_634523.1| - 0.015 15.2 0.1 0.062 13.2 0.0 2.1 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|21228601|ref|NP_634523.1| - 0.048 14.2 0.1 0.048 14.2 0.1 2.4 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase SE PF08491.10 gi|21228601|ref|NP_634523.1| - 0.16 11.0 0.2 0.32 10.0 0.2 1.4 1 0 0 1 1 1 0 Squalene epoxidase TrkH PF02386.16 gi|21228602|ref|NP_634524.1| - 8.1e-63 212.6 19.3 1.9e-61 208.1 19.3 2.0 1 1 0 1 1 1 1 Cation transport protein YniB PF14002.6 gi|21228602|ref|NP_634524.1| - 0.096 12.4 0.4 0.096 12.4 0.4 2.5 3 0 0 3 3 3 0 YniB-like protein TrkA_N PF02254.18 gi|21228603|ref|NP_634525.1| - 1.5e-46 157.4 8.3 6.9e-26 90.8 0.8 2.3 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|21228603|ref|NP_634525.1| - 7.6e-32 109.0 3.7 4.8e-15 55.1 0.2 3.2 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|21228603|ref|NP_634525.1| - 3.6e-08 33.8 2.2 0.0049 17.3 0.1 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|21228603|ref|NP_634525.1| - 4.4e-07 30.0 1.9 0.0018 18.3 0.1 2.6 2 1 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|21228603|ref|NP_634525.1| - 3e-06 26.7 2.7 0.0018 17.6 1.1 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|21228603|ref|NP_634525.1| - 0.00026 21.2 5.1 0.13 12.6 1.0 2.8 2 1 1 3 3 3 2 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 gi|21228603|ref|NP_634525.1| - 0.00099 19.0 2.5 0.046 13.6 0.5 2.3 2 0 0 2 2 2 1 NAD(P)H-binding Pyr_redox_2 PF07992.14 gi|21228603|ref|NP_634525.1| - 0.0012 18.2 0.3 0.62 9.2 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase RE_BsaWI PF18643.1 gi|21228603|ref|NP_634525.1| - 0.01 15.8 1.1 3.8 7.5 0.0 3.0 3 0 0 3 3 3 1 BsaWI restriction endonuclease type 2 Pyr_redox PF00070.27 gi|21228603|ref|NP_634525.1| - 0.027 15.0 2.6 0.3 11.7 0.2 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|21228603|ref|NP_634525.1| - 0.029 13.9 0.9 0.2 11.2 0.2 2.7 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 gi|21228603|ref|NP_634525.1| - 0.033 13.8 0.1 5.3 6.7 0.0 2.3 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA THF_DHG_CYH_C PF02882.19 gi|21228603|ref|NP_634525.1| - 0.046 13.0 3.2 1.2 8.4 0.0 3.1 3 1 0 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 3HCDH_N PF02737.18 gi|21228603|ref|NP_634525.1| - 0.092 12.6 0.9 0.32 10.8 0.1 2.2 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF4748 PF15932.5 gi|21228603|ref|NP_634525.1| - 0.097 12.4 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) ThiF PF00899.21 gi|21228603|ref|NP_634525.1| - 0.13 11.6 1.9 32 3.7 0.1 3.2 2 1 1 3 3 3 0 ThiF family DAO PF01266.24 gi|21228603|ref|NP_634525.1| - 0.52 9.8 2.6 0.2 11.2 0.1 1.6 2 0 0 2 2 2 0 FAD dependent oxidoreductase TrkH PF02386.16 gi|21228604|ref|NP_634526.1| - 5.2e-60 203.3 19.6 6e-59 199.8 19.6 1.9 1 1 0 1 1 1 1 Cation transport protein Form-deh_trans PF09163.11 gi|21228604|ref|NP_634526.1| - 5.1 7.0 5.6 13 5.7 0.6 3.4 3 0 0 3 3 3 0 Formate dehydrogenase N, transmembrane TrkA_N PF02254.18 gi|21228605|ref|NP_634527.1| - 1.3e-49 167.3 7.5 9.7e-27 93.5 0.4 2.3 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|21228605|ref|NP_634527.1| - 1.3e-32 111.4 0.8 3.6e-15 55.5 0.0 3.5 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|21228605|ref|NP_634527.1| - 2.6e-08 34.3 5.0 0.0015 18.9 1.1 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|21228605|ref|NP_634527.1| - 4.2e-08 33.3 4.7 0.00023 21.2 0.7 2.5 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|21228605|ref|NP_634527.1| - 7.7e-08 32.7 4.2 0.0013 19.0 0.5 3.2 2 1 2 4 4 4 2 Saccharopine dehydrogenase NADP binding domain AlaDh_PNT_C PF01262.21 gi|21228605|ref|NP_634527.1| - 8.5e-06 25.2 4.6 0.0023 17.3 2.4 2.2 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 gi|21228605|ref|NP_634527.1| - 3.1e-05 24.5 2.4 0.061 13.9 0.2 3.4 2 1 1 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|21228605|ref|NP_634527.1| - 0.00016 21.3 0.2 0.31 10.7 0.0 2.5 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA DUF1188 PF06690.11 gi|21228605|ref|NP_634527.1| - 0.0004 20.0 3.7 0.008 15.8 0.2 2.5 3 0 0 3 3 3 1 Protein of unknown function (DUF1188) NAD_binding_10 PF13460.6 gi|21228605|ref|NP_634527.1| - 0.00042 20.3 1.6 0.11 12.4 0.3 2.5 2 0 0 2 2 2 2 NAD(P)H-binding NAD_binding_8 PF13450.6 gi|21228605|ref|NP_634527.1| - 0.0013 19.0 0.0 1.3 9.3 0.0 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain NAD_Gly3P_dh_N PF01210.23 gi|21228605|ref|NP_634527.1| - 0.0049 16.8 0.4 2 8.4 0.2 2.9 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 gi|21228605|ref|NP_634527.1| - 0.0074 15.7 1.0 1.5 8.1 0.0 3.2 2 1 1 3 3 3 1 ThiF family DAO PF01266.24 gi|21228605|ref|NP_634527.1| - 0.0092 15.6 0.0 0.031 13.9 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|21228605|ref|NP_634527.1| - 0.017 14.4 1.2 2.4 7.3 0.2 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Castor_Poll_mid PF06241.12 gi|21228605|ref|NP_634527.1| - 0.019 14.9 0.2 12 5.9 0.0 2.9 3 0 0 3 3 2 0 Castor and Pollux, part of voltage-gated ion channel UDPG_MGDP_dh_N PF03721.14 gi|21228605|ref|NP_634527.1| - 0.025 14.1 0.6 0.29 10.7 0.1 2.8 3 1 0 4 4 4 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 gi|21228605|ref|NP_634527.1| - 0.027 14.4 0.9 0.15 11.9 0.1 2.5 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NmrA PF05368.13 gi|21228605|ref|NP_634527.1| - 0.042 13.4 1.7 0.068 12.7 0.7 1.8 2 0 0 2 2 2 0 NmrA-like family GFO_IDH_MocA PF01408.22 gi|21228605|ref|NP_634527.1| - 0.071 13.9 0.2 5.7 7.8 0.1 2.5 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold AdoHcyase_NAD PF00670.21 gi|21228605|ref|NP_634527.1| - 0.089 12.9 2.8 0.3 11.1 0.9 2.4 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FAD_binding_3 PF01494.19 gi|21228605|ref|NP_634527.1| - 0.1 11.8 0.0 0.92 8.7 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain RNase_PH_C PF03725.15 gi|21228605|ref|NP_634527.1| - 0.13 12.3 1.5 15 5.7 0.1 2.9 2 0 0 2 2 2 0 3' exoribonuclease family, domain 2 RE_BsaWI PF18643.1 gi|21228605|ref|NP_634527.1| - 0.4 10.6 3.0 40 4.2 0.1 4.1 4 1 0 4 4 4 0 BsaWI restriction endonuclease type 2 DnaJ_C PF01556.18 gi|21228606|ref|NP_634528.1| - 3.9e-38 130.9 0.0 5.1e-38 130.5 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|21228606|ref|NP_634528.1| - 4.6e-28 97.1 2.7 4.6e-28 97.1 2.7 2.0 2 0 0 2 2 2 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|21228606|ref|NP_634528.1| - 1.6e-14 54.0 16.9 3.1e-14 53.1 16.9 1.5 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|21228606|ref|NP_634528.1| - 1.4e-05 25.0 17.4 0.0021 18.0 4.8 2.9 1 1 2 3 3 3 3 Tryptophan RNA-binding attenuator protein inhibitory protein Prim_Zn_Ribbon PF08273.12 gi|21228606|ref|NP_634528.1| - 0.007 16.6 14.7 0.012 15.9 2.1 3.2 3 0 0 3 3 3 2 Zinc-binding domain of primase-helicase Ogr_Delta PF04606.12 gi|21228606|ref|NP_634528.1| - 0.027 14.4 9.2 1.3 9.1 2.5 2.7 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger HypA PF01155.19 gi|21228606|ref|NP_634528.1| - 0.48 10.5 10.0 2.3 8.2 1.4 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Lar_restr_allev PF14354.6 gi|21228606|ref|NP_634528.1| - 1.3 9.5 5.9 4.7 7.7 0.8 2.5 1 1 1 2 2 2 0 Restriction alleviation protein Lar zf_Rg PF17915.1 gi|21228606|ref|NP_634528.1| - 2 7.9 8.9 25 4.4 0.1 2.8 2 1 0 2 2 2 0 Reverse gyrase zinc finger FdhE PF04216.12 gi|21228606|ref|NP_634528.1| - 2.9 7.7 5.3 5.8 6.7 5.3 1.4 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zf-C3HC4_3 PF13920.6 gi|21228606|ref|NP_634528.1| - 3.2 7.7 6.1 14 5.7 0.4 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) TackOD1 PF18551.1 gi|21228606|ref|NP_634528.1| - 8.4 6.0 6.9 8.5 6.0 1.6 2.3 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 HSP70 PF00012.20 gi|21228607|ref|NP_634529.1| - 2.8e-253 841.5 13.7 3.7e-251 834.6 13.7 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|21228607|ref|NP_634529.1| - 3e-17 62.4 2.1 3e-17 62.4 2.1 2.5 2 1 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 gi|21228607|ref|NP_634529.1| - 3.1e-05 24.3 1.3 0.45 11.0 0.0 3.5 3 1 0 3 3 3 2 Cell division protein FtsA FGGY_C PF02782.16 gi|21228607|ref|NP_634529.1| - 4.2e-05 23.4 0.0 0.0001 22.1 0.0 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 gi|21228607|ref|NP_634529.1| - 0.011 15.2 3.6 1.5 8.3 0.0 2.8 2 1 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family Big_3_3 PF13750.6 gi|21228607|ref|NP_634529.1| - 0.098 12.3 0.0 0.29 10.8 0.0 1.8 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) DUF3347 PF11827.8 gi|21228607|ref|NP_634529.1| - 0.12 12.6 7.1 0.45 10.7 5.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3347) DUF1090 PF06476.12 gi|21228607|ref|NP_634529.1| - 0.48 10.6 11.0 1.5 9.0 11.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) Phage_connect_1 PF05135.13 gi|21228607|ref|NP_634529.1| - 2.7 8.5 7.8 6.5 7.3 0.1 3.6 3 1 0 3 3 3 0 Phage gp6-like head-tail connector protein Vfa1 PF08432.10 gi|21228607|ref|NP_634529.1| - 3.1 8.1 8.0 6 7.1 8.0 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 GrpE PF01025.19 gi|21228608|ref|NP_634530.1| - 5.5e-44 149.8 4.1 7.1e-44 149.4 4.1 1.2 1 0 0 1 1 1 1 GrpE PUMA PF15826.5 gi|21228608|ref|NP_634530.1| - 0.073 13.2 1.1 0.1 12.8 1.1 1.2 1 0 0 1 1 1 0 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis DDE_Tnp_1 PF01609.21 gi|21228609|ref|NP_634531.1| - 1.5e-12 47.6 0.8 2.3e-12 47.0 0.8 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.9 gi|21228609|ref|NP_634531.1| - 0.0039 17.2 0.1 0.013 15.5 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) DDE_Tnp_1_4 PF13701.6 gi|21228609|ref|NP_634531.1| - 0.025 12.8 1.1 0.068 11.4 1.1 1.7 1 1 0 1 1 1 0 Transposase DDE domain group 1 EbsA PF17255.2 gi|21228610|ref|NP_634532.1| - 3.3 8.0 4.9 1.6 9.1 1.2 2.1 2 0 0 2 2 2 0 EbsA-like protein ABC2_membrane_4 PF12730.7 gi|21228610|ref|NP_634532.1| - 4 7.4 11.9 0.75 9.7 4.0 2.2 1 1 1 2 2 2 0 ABC-2 family transporter protein Peptidase_A24 PF01478.18 gi|21228610|ref|NP_634532.1| - 4 7.9 18.0 29 5.1 18.0 2.4 1 1 0 1 1 1 0 Type IV leader peptidase family DoxX_3 PF13781.6 gi|21228610|ref|NP_634532.1| - 5.5 7.7 11.0 1.4 9.6 0.9 2.1 1 1 1 2 2 2 0 DoxX-like family DDE_Tnp_1 PF01609.21 gi|21228611|ref|NP_634533.1| - 1.5e-12 47.6 0.8 2.3e-12 47.0 0.8 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.9 gi|21228611|ref|NP_634533.1| - 0.0039 17.2 0.1 0.013 15.5 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) DDE_Tnp_1_4 PF13701.6 gi|21228611|ref|NP_634533.1| - 0.025 12.8 1.1 0.068 11.4 1.1 1.7 1 1 0 1 1 1 0 Transposase DDE domain group 1 ATP-grasp_3 PF02655.14 gi|21228612|ref|NP_634534.1| - 5.9e-42 143.4 0.0 7.9e-42 143.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain preATP-grasp_3 PF18301.1 gi|21228612|ref|NP_634534.1| - 0.00011 22.4 0.0 0.00021 21.5 0.0 1.5 1 0 0 1 1 1 1 pre ATP-grasp 3 domain ATPgrasp_ST PF14397.6 gi|21228612|ref|NP_634534.1| - 0.00015 21.1 0.0 0.0046 16.2 0.0 2.2 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp Rossmann-like PF10727.9 gi|21228612|ref|NP_634534.1| - 0.054 13.3 0.0 0.09 12.6 0.0 1.3 1 0 0 1 1 1 0 Rossmann-like domain ATPgrasp_Ter PF15632.6 gi|21228612|ref|NP_634534.1| - 0.13 12.1 0.0 0.39 10.5 0.0 1.9 2 1 0 2 2 2 0 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.13 gi|21228612|ref|NP_634534.1| - 0.17 11.4 0.0 0.31 10.5 0.0 1.5 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus Hydantoinase_A PF01968.18 gi|21228613|ref|NP_634535.1| - 1.9e-37 129.1 0.7 1.6e-36 126.0 0.1 1.9 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|21228613|ref|NP_634535.1| - 6.4e-05 21.7 0.1 0.0064 15.2 0.0 2.3 2 0 0 2 2 2 2 MutL protein EIF_2_alpha PF07541.12 gi|21228613|ref|NP_634535.1| - 0.15 12.2 0.1 0.43 10.7 0.0 1.8 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 2 alpha subunit AA_kinase PF00696.28 gi|21228614|ref|NP_634536.1| - 9.3e-10 38.5 0.0 1.2e-06 28.3 0.0 2.1 1 1 0 1 1 1 1 Amino acid kinase family Peptidase_C5 PF00770.18 gi|21228614|ref|NP_634536.1| - 0.15 11.7 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Adenovirus endoprotease DUF1610 PF07754.11 gi|21228615|ref|NP_634537.1| - 6e-11 42.1 17.7 1.1e-10 41.3 2.1 3.0 2 1 0 2 2 2 1 Domain of unknown function (DUF1610) zinc_ribbon_2 PF13240.6 gi|21228615|ref|NP_634537.1| - 0.00028 20.5 19.9 0.0065 16.1 5.0 3.6 2 2 1 3 3 3 2 zinc-ribbon domain DZR PF12773.7 gi|21228615|ref|NP_634537.1| - 0.00096 19.1 12.6 0.24 11.5 12.6 2.4 1 1 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|21228615|ref|NP_634537.1| - 0.0044 16.4 15.3 1.1 8.7 0.6 3.7 3 1 0 3 3 3 1 zinc-ribbon domain tRNA-synt_1g PF09334.11 gi|21228615|ref|NP_634537.1| - 0.0085 14.9 3.5 0.0093 14.7 3.5 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) OrfB_Zn_ribbon PF07282.11 gi|21228615|ref|NP_634537.1| - 0.0087 16.0 10.3 0.015 15.2 6.0 2.1 1 1 1 2 2 2 2 Putative transposase DNA-binding domain zf_C2H2_10 PF18414.1 gi|21228615|ref|NP_634537.1| - 0.013 15.0 8.0 0.063 12.8 1.3 2.5 2 0 0 2 2 2 0 C2H2 type zinc-finger DUF2039 PF10217.9 gi|21228615|ref|NP_634537.1| - 0.016 15.6 3.7 0.016 15.6 3.7 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2039) HypA PF01155.19 gi|21228615|ref|NP_634537.1| - 0.021 14.8 11.2 0.089 12.8 0.6 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf_UBZ PF18439.1 gi|21228615|ref|NP_634537.1| - 0.027 14.1 2.2 0.44 10.2 0.2 3.4 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger Rhodanese_C PF12368.8 gi|21228615|ref|NP_634537.1| - 0.034 14.5 7.2 0.038 14.4 7.2 1.1 1 0 0 1 1 1 0 Rhodanase C-terminal Auto_anti-p27 PF06677.12 gi|21228615|ref|NP_634537.1| - 0.039 14.1 1.7 0.039 14.1 1.7 2.6 2 1 1 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-tcix PF14952.6 gi|21228615|ref|NP_634537.1| - 0.043 13.4 17.8 0.32 10.7 5.0 3.1 2 1 1 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding zf-RING_7 PF02591.15 gi|21228615|ref|NP_634537.1| - 0.046 13.9 14.2 6.5 7.0 0.2 3.8 3 1 0 3 3 3 0 C4-type zinc ribbon domain zf-C4_Topoisom PF01396.19 gi|21228615|ref|NP_634537.1| - 0.073 12.9 12.7 2.7 7.8 0.4 3.6 2 1 2 4 4 4 0 Topoisomerase DNA binding C4 zinc finger Zn_Tnp_IS91 PF14319.6 gi|21228615|ref|NP_634537.1| - 0.08 13.0 9.6 0.16 12.0 9.6 1.5 1 1 0 1 1 1 0 Transposase zinc-binding domain zinc-ribbons_6 PF07191.12 gi|21228615|ref|NP_634537.1| - 0.089 12.8 9.8 0.72 9.9 9.8 2.0 1 1 0 1 1 1 0 zinc-ribbons C1_2 PF03107.16 gi|21228615|ref|NP_634537.1| - 0.098 13.0 11.4 0.11 12.8 5.4 2.2 1 1 1 2 2 2 0 C1 domain zf-Mss51 PF13824.6 gi|21228615|ref|NP_634537.1| - 0.12 12.5 12.6 3.6 7.8 6.2 2.6 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-CHY PF05495.12 gi|21228615|ref|NP_634537.1| - 0.16 12.5 11.3 1.1 9.8 6.9 2.1 1 1 1 2 2 2 0 CHY zinc finger Zn_ribbon_SprT PF17283.2 gi|21228615|ref|NP_634537.1| - 0.16 11.9 16.8 2.7 8.0 0.3 4.0 3 1 1 4 4 4 0 SprT-like zinc ribbon domain NRDD PF13597.6 gi|21228615|ref|NP_634537.1| - 0.19 10.5 12.4 0.55 8.9 1.0 2.0 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase zf-UBP PF02148.19 gi|21228615|ref|NP_634537.1| - 0.19 12.1 1.6 0.19 12.1 1.6 2.2 2 1 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein zf-HIT PF04438.16 gi|21228615|ref|NP_634537.1| - 0.27 11.2 15.0 0.47 10.4 5.0 3.0 2 1 0 2 2 2 0 HIT zinc finger zf-C3HC4_4 PF15227.6 gi|21228615|ref|NP_634537.1| - 0.27 11.4 9.6 0.26 11.5 1.1 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING Rubredoxin_2 PF18073.1 gi|21228615|ref|NP_634537.1| - 0.3 10.8 15.9 2.8 7.7 0.1 4.0 3 1 0 3 3 3 0 Rubredoxin metal binding domain zf-C2HC5 PF06221.13 gi|21228615|ref|NP_634537.1| - 0.33 11.0 10.5 0.22 11.5 2.6 2.4 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type Nudix_N_2 PF14803.6 gi|21228615|ref|NP_634537.1| - 0.35 10.8 14.9 4.7 7.2 0.1 3.9 3 1 1 4 4 4 0 Nudix N-terminal DNA_RNApol_7kD PF03604.13 gi|21228615|ref|NP_634537.1| - 0.39 10.4 13.0 2.4 7.9 0.1 3.8 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-HYPF PF07503.12 gi|21228615|ref|NP_634537.1| - 0.4 10.5 12.8 5.7 6.8 0.1 2.6 2 1 0 2 2 2 0 HypF finger zf-TFIIB PF13453.6 gi|21228615|ref|NP_634537.1| - 0.46 9.9 14.3 6 6.3 10.6 2.7 2 1 0 2 2 2 0 Transcription factor zinc-finger PolC_DP2 PF03833.13 gi|21228615|ref|NP_634537.1| - 0.57 8.0 6.0 0.6 7.9 6.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-ACC PF17848.1 gi|21228615|ref|NP_634537.1| - 0.73 10.0 17.5 11 6.2 0.2 4.0 3 1 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain zf-C3HC4 PF00097.25 gi|21228615|ref|NP_634537.1| - 0.89 9.5 12.4 0.25 11.3 1.8 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_10 PF10058.9 gi|21228615|ref|NP_634537.1| - 1.1 9.1 14.3 3.6 7.4 2.5 3.4 1 1 2 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein C1_1 PF00130.22 gi|21228615|ref|NP_634537.1| - 1.2 9.1 10.1 0.22 11.5 0.6 2.3 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-LITAF-like PF10601.9 gi|21228615|ref|NP_634537.1| - 1.3 9.3 13.3 3.6 7.9 0.3 3.6 1 1 2 3 3 3 0 LITAF-like zinc ribbon domain NMD3 PF04981.13 gi|21228615|ref|NP_634537.1| - 1.5 8.2 9.7 1.9 7.9 9.7 1.1 1 0 0 1 1 1 0 NMD3 family Zn-ribbon_8 PF09723.10 gi|21228615|ref|NP_634537.1| - 2.6 8.3 18.0 24 5.2 0.1 3.6 1 1 2 3 3 3 0 Zinc ribbon domain A2L_zn_ribbon PF08792.10 gi|21228615|ref|NP_634537.1| - 3 7.7 12.9 3 7.7 2.2 3.6 3 1 0 3 3 3 0 A2L zinc ribbon domain PknG_rubred PF16919.5 gi|21228615|ref|NP_634537.1| - 3.8 7.7 12.7 0.36 11.0 7.4 1.8 1 1 1 2 2 2 0 Protein kinase G rubredoxin domain CpXC PF14353.6 gi|21228615|ref|NP_634537.1| - 4.8 7.2 11.7 7 6.7 1.3 2.7 1 1 2 3 3 3 0 CpXC protein zf-trcl PF13451.6 gi|21228615|ref|NP_634537.1| - 5.9 6.9 15.2 4.5 7.3 1.1 3.8 2 1 2 4 4 4 0 Probable zinc-ribbon domain YhfH PF14149.6 gi|21228615|ref|NP_634537.1| - 5.9 7.0 14.2 23 5.1 0.1 3.6 3 1 0 3 3 3 0 YhfH-like protein PhnA_Zn_Ribbon PF08274.12 gi|21228615|ref|NP_634537.1| - 6.9 6.7 12.6 0.99 9.4 6.5 2.6 2 1 0 2 2 1 0 PhnA Zinc-Ribbon EF1_GNE PF00736.19 gi|21228616|ref|NP_634538.1| - 4.8e-19 68.3 0.1 5.2e-19 68.2 0.1 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain PAS_3 PF08447.12 gi|21228617|ref|NP_634539.1| - 6.9e-94 308.3 15.2 6e-25 87.3 0.4 5.5 5 0 0 5 5 5 5 PAS fold PAS_9 PF13426.7 gi|21228617|ref|NP_634539.1| - 1.7e-36 124.6 3.2 7.4e-07 29.4 0.0 6.6 6 0 0 6 6 6 4 PAS domain HisKA_2 PF07568.12 gi|21228617|ref|NP_634539.1| - 6.6e-32 109.4 8.6 1.6e-31 108.2 4.0 3.3 3 0 0 3 3 3 1 Histidine kinase PAS PF00989.25 gi|21228617|ref|NP_634539.1| - 8.6e-32 109.5 0.3 1.2e-07 31.7 0.0 6.8 6 0 0 6 6 6 5 PAS fold PAS_4 PF08448.10 gi|21228617|ref|NP_634539.1| - 6.9e-22 77.8 0.0 1.4e-10 41.4 0.0 4.9 4 0 0 4 4 4 4 PAS fold PAS_11 PF14598.6 gi|21228617|ref|NP_634539.1| - 1.9e-10 40.8 0.0 0.016 15.3 0.0 5.3 5 0 0 5 5 5 2 PAS domain HATPase_c PF02518.26 gi|21228617|ref|NP_634539.1| - 9.5e-09 35.8 0.2 1.4e-07 32.0 0.1 2.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|21228617|ref|NP_634539.1| - 6.8e-05 23.5 0.4 0.00017 22.2 0.4 1.7 1 0 0 1 1 1 1 HWE histidine kinase YcgL PF05166.13 gi|21228617|ref|NP_634539.1| - 9.8e-05 22.6 2.3 7.3 7.0 0.1 4.0 3 0 0 3 3 3 2 YcgL domain PAS_8 PF13188.7 gi|21228617|ref|NP_634539.1| - 0.00059 19.8 0.1 1 9.5 0.0 4.7 5 0 0 5 5 5 1 PAS domain PAS_6 PF08348.11 gi|21228617|ref|NP_634539.1| - 0.0047 16.8 0.1 0.062 13.2 0.0 2.8 3 0 0 3 3 3 1 YheO-like PAS domain Nit_Regul_Hom PF10126.9 gi|21228617|ref|NP_634539.1| - 0.0073 16.3 0.4 0.31 11.1 0.0 3.2 3 0 0 3 3 3 1 Uncharacterized protein, homolog of nitrogen regulatory protein PII CCDC32 PF14989.6 gi|21228617|ref|NP_634539.1| - 0.11 12.4 2.8 29 4.6 0.1 3.7 4 0 0 4 4 4 0 Coiled-coil domain containing 32 AF0941-like PF14591.6 gi|21228617|ref|NP_634539.1| - 0.15 12.6 0.2 0.15 12.6 0.2 2.6 3 0 0 3 3 2 0 AF0941-like STN1_2 PF09170.10 gi|21228617|ref|NP_634539.1| - 0.55 10.4 4.9 2.8 8.1 0.0 2.5 2 0 0 2 2 2 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 Response_reg PF00072.24 gi|21228618|ref|NP_634540.1| - 1.4e-23 83.2 0.2 1.7e-23 82.9 0.2 1.1 1 0 0 1 1 1 1 Response regulator receiver domain ThiI PF02568.14 gi|21228619|ref|NP_634541.1| - 2.6e-53 180.5 0.0 3.7e-53 180.1 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|21228619|ref|NP_634541.1| - 8e-16 58.4 0.0 2.9e-15 56.6 0.0 2.0 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 gi|21228619|ref|NP_634541.1| - 1.3e-05 24.9 0.0 0.017 14.6 0.0 2.3 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|21228619|ref|NP_634541.1| - 0.00033 19.6 0.0 0.00067 18.5 0.0 1.5 2 0 0 2 2 2 1 tRNA methyl transferase PAS_9 PF13426.7 gi|21228620|ref|NP_634542.1| - 8.5e-33 112.7 0.7 5.3e-16 58.8 0.1 3.7 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 gi|21228620|ref|NP_634542.1| - 3.9e-31 107.4 0.0 1.6e-11 44.2 0.0 3.6 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.7 gi|21228620|ref|NP_634542.1| - 5.9e-27 93.2 0.1 4.9e-09 36.0 0.0 4.0 3 1 1 4 4 4 3 PAS domain HATPase_c PF02518.26 gi|21228620|ref|NP_634542.1| - 2.3e-26 92.5 0.2 4.8e-26 91.5 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|21228620|ref|NP_634542.1| - 9.1e-18 64.5 0.0 1.2e-05 25.6 0.0 3.7 3 1 0 3 3 3 3 PAS fold HisKA PF00512.25 gi|21228620|ref|NP_634542.1| - 1.2e-15 57.3 0.1 5.2e-15 55.2 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain Response_reg PF00072.24 gi|21228620|ref|NP_634542.1| - 2.1e-10 40.7 0.0 1.6e-09 37.9 0.0 2.5 3 0 0 3 3 3 1 Response regulator receiver domain PAS_3 PF08447.12 gi|21228620|ref|NP_634542.1| - 9.6e-09 35.4 0.0 0.12 12.7 0.0 3.7 3 0 0 3 3 3 3 PAS fold PAS_7 PF12860.7 gi|21228620|ref|NP_634542.1| - 0.00014 22.0 0.3 1.4 9.1 0.0 4.4 4 1 0 4 4 4 2 PAS fold HATPase_c_3 PF13589.6 gi|21228620|ref|NP_634542.1| - 0.0037 17.1 0.1 0.0087 15.9 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cyclase_polyket PF04673.12 gi|21228620|ref|NP_634542.1| - 0.097 12.9 0.0 0.35 11.1 0.0 1.9 1 0 0 1 1 1 0 Polyketide synthesis cyclase MMR_HSR1 PF01926.23 gi|21228621|ref|NP_634543.1| - 6.4e-18 64.9 0.5 9.4e-14 51.5 0.0 2.2 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|21228621|ref|NP_634543.1| - 1e-10 41.3 1.1 0.00028 20.4 0.2 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|21228621|ref|NP_634543.1| - 3.4e-10 40.1 0.1 6.3e-10 39.2 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase GTP_EFTU PF00009.27 gi|21228621|ref|NP_634543.1| - 5.6e-06 26.0 2.2 0.0001 21.9 0.2 2.4 1 1 0 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 gi|21228621|ref|NP_634543.1| - 0.00015 21.7 0.1 0.00041 20.3 0.1 1.7 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain AIG1 PF04548.16 gi|21228621|ref|NP_634543.1| - 0.00096 18.5 0.0 0.0019 17.6 0.0 1.5 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 gi|21228621|ref|NP_634543.1| - 0.0016 18.5 2.3 3.3 7.7 0.1 3.2 2 1 1 3 3 3 2 Dynamin family cobW PF02492.19 gi|21228621|ref|NP_634543.1| - 0.002 17.8 0.4 0.002 17.8 0.4 1.7 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|21228621|ref|NP_634543.1| - 0.075 12.0 2.4 0.32 10.0 0.2 2.3 1 1 1 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 gi|21228621|ref|NP_634543.1| - 0.081 12.7 0.3 0.2 11.4 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Poty_PP PF08440.10 gi|21228621|ref|NP_634543.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 Potyviridae polyprotein Pput2613-deam PF14427.6 gi|21228622|ref|NP_634544.1| - 0.01 15.7 0.3 0.017 15.0 0.3 1.4 1 1 0 1 1 1 0 Pput_2613-like deaminase ChapFlgA PF13144.6 gi|21228622|ref|NP_634544.1| - 0.2 11.7 0.0 0.26 11.4 0.0 1.2 1 0 0 1 1 1 0 Chaperone for flagella basal body P-ring formation MDFI PF15316.6 gi|21228623|ref|NP_634545.1| - 1.6 8.8 9.6 6.8 6.7 3.0 2.1 1 1 1 2 2 2 0 MyoD family inhibitor Usp PF00582.26 gi|21228624|ref|NP_634546.1| - 3.4e-37 128.1 0.0 4e-37 127.9 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family TPD52 PF04201.15 gi|21228625|ref|NP_634547.1| - 0.055 13.1 0.7 0.085 12.5 0.7 1.3 1 1 0 1 1 1 0 Tumour protein D52 family PspA_IM30 PF04012.12 gi|21228626|ref|NP_634548.1| - 1.8e-24 86.6 32.2 2.1e-24 86.4 32.2 1.0 1 0 0 1 1 1 1 PspA/IM30 family NOG1 PF06858.14 gi|21228626|ref|NP_634548.1| - 0.0026 17.5 0.1 0.0099 15.6 0.0 2.1 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) Flagellin_C PF00700.21 gi|21228626|ref|NP_634548.1| - 0.0092 16.3 10.5 0.24 11.8 0.1 3.4 1 1 2 3 3 3 2 Bacterial flagellin C-terminal helical region Osmo_CC PF08946.10 gi|21228626|ref|NP_634548.1| - 0.018 15.3 2.8 0.018 15.3 2.8 4.0 4 1 0 4 4 4 0 Osmosensory transporter coiled coil DUF1910 PF08928.10 gi|21228626|ref|NP_634548.1| - 0.087 12.8 4.9 0.04 13.9 1.4 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF1910) Sec34 PF04136.15 gi|21228626|ref|NP_634548.1| - 0.19 11.6 12.0 0.56 10.1 1.8 3.2 2 1 1 3 3 3 0 Sec34-like family DUF1664 PF07889.12 gi|21228626|ref|NP_634548.1| - 0.95 9.5 17.0 0.69 10.0 3.4 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DUF5082 PF16888.5 gi|21228626|ref|NP_634548.1| - 5.2 7.4 20.9 0.68 10.2 10.5 2.7 1 1 1 3 3 3 0 Domain of unknown function (DUF5082) DAP_B PF07930.12 gi|21228626|ref|NP_634548.1| - 7.7 6.5 9.0 3.8 7.5 1.2 2.3 1 1 2 3 3 3 0 D-aminopeptidase, domain B NPV_P10 PF05531.12 gi|21228626|ref|NP_634548.1| - 9.8 6.7 11.6 11 6.6 0.7 3.6 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein V4R PF02830.18 gi|21228627|ref|NP_634549.1| - 2.3e-16 59.5 0.6 4.7e-16 58.6 0.6 1.6 1 0 0 1 1 1 1 V4R domain HTH_5 PF01022.20 gi|21228627|ref|NP_634549.1| - 1.8e-13 50.1 0.0 3.3e-13 49.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|21228627|ref|NP_634549.1| - 4.9e-06 26.3 0.0 8.2e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21228627|ref|NP_634549.1| - 2.3e-05 24.8 0.0 4.4e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|21228627|ref|NP_634549.1| - 0.00037 20.5 0.0 0.00091 19.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|21228627|ref|NP_634549.1| - 0.00071 19.3 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|21228627|ref|NP_634549.1| - 0.015 15.2 0.0 0.032 14.1 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB RnlB_antitoxin PF15933.5 gi|21228627|ref|NP_634549.1| - 0.019 15.3 0.0 0.033 14.5 0.0 1.5 1 0 0 1 1 1 0 Antitoxin to bacterial toxin RNase LS or RnlA DprA_WH PF17782.1 gi|21228627|ref|NP_634549.1| - 0.094 12.9 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 DprA winged helix domain HxlR PF01638.17 gi|21228627|ref|NP_634549.1| - 0.11 12.4 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF2110 PF09883.9 gi|21228628|ref|NP_634550.1| - 9.8e-88 293.5 0.0 1.1e-87 293.3 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2110) MarR PF01047.22 gi|21228629|ref|NP_634551.1| - 0.006 16.5 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|21228629|ref|NP_634551.1| - 0.019 14.9 0.0 0.045 13.7 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain RE_MjaI PF09568.10 gi|21228629|ref|NP_634551.1| - 0.034 14.0 1.2 0.034 14.0 1.2 1.7 2 0 0 2 2 2 0 MjaI restriction endonuclease HTH_27 PF13463.6 gi|21228629|ref|NP_634551.1| - 0.049 14.1 0.0 0.13 12.8 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain Sigma70_ner PF04546.13 gi|21228629|ref|NP_634551.1| - 0.061 13.2 8.2 0.12 12.3 7.9 1.6 1 1 0 1 1 1 0 Sigma-70, non-essential region DUF2250 PF10007.9 gi|21228629|ref|NP_634551.1| - 0.071 13.2 0.0 0.2 11.8 0.0 1.8 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Atg14 PF10186.9 gi|21228629|ref|NP_634551.1| - 0.69 8.9 3.2 1.1 8.2 3.2 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TRM PF02005.16 gi|21228630|ref|NP_634552.1| - 1.6e-105 353.4 0.0 2e-105 353.1 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Cons_hypoth95 PF03602.15 gi|21228630|ref|NP_634552.1| - 0.0074 16.0 0.0 0.015 14.9 0.0 1.5 1 0 0 1 1 1 1 Conserved hypothetical protein 95 zf-ribbon_3 PF13248.6 gi|21228630|ref|NP_634552.1| - 2.2 7.8 6.9 8 6.0 0.2 3.0 3 0 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21228630|ref|NP_634552.1| - 3.6 7.8 4.9 55 4.0 5.4 2.4 1 1 1 2 2 2 0 Zinc ribbon domain Cupredoxin_1 PF13473.6 gi|21228631|ref|NP_634553.1| - 0.00076 19.6 0.0 0.0012 18.9 0.0 1.3 1 1 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 gi|21228631|ref|NP_634553.1| - 0.036 14.5 0.3 0.18 12.2 0.1 2.2 2 1 0 2 2 2 0 Copper binding proteins, plastocyanin/azurin family Transposase_mut PF00872.18 gi|21228632|ref|NP_634554.1| - 2.3e-113 378.9 2.6 2.8e-113 378.6 2.6 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|21228632|ref|NP_634554.1| - 7.6e-10 39.1 0.0 2.1e-09 37.7 0.0 1.8 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|21228632|ref|NP_634554.1| - 9.2e-05 22.0 1.1 0.00031 20.3 1.1 1.8 1 1 0 1 1 1 1 Transposase IS66 family DDE_Tnp_ISL3 PF01610.17 gi|21228632|ref|NP_634554.1| - 0.0023 17.7 1.5 0.033 13.9 0.2 2.4 2 1 1 3 3 3 1 Transposase DDE_Tnp_IS240 PF13610.6 gi|21228632|ref|NP_634554.1| - 0.0029 17.8 3.4 0.055 13.7 2.8 2.6 1 1 1 2 2 2 1 DDE domain Dynein_light PF01221.18 gi|21228632|ref|NP_634554.1| - 0.063 13.6 0.9 0.22 11.9 0.6 2.1 2 0 0 2 2 2 0 Dynein light chain type 1 Tim54 PF11711.8 gi|21228633|ref|NP_634555.1| - 0.43 9.3 4.8 0.44 9.3 4.8 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF4010 PF13194.6 gi|21228634|ref|NP_634556.1| - 1.7e-48 165.1 18.9 1.7e-48 165.1 18.9 2.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4010) MgtC PF02308.16 gi|21228634|ref|NP_634556.1| - 6.7e-17 62.0 8.7 6.7e-17 62.0 8.7 3.6 2 1 0 2 2 2 1 MgtC family Metallophos_2 PF12850.7 gi|21228635|ref|NP_634557.1| - 1.2e-21 77.6 0.0 1.7e-21 77.1 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|21228635|ref|NP_634557.1| - 2.6e-19 70.6 0.1 4.5e-19 69.8 0.1 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|21228635|ref|NP_634557.1| - 8.1e-14 51.6 0.5 2.1e-09 37.1 0.1 2.6 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily Methyltrn_RNA_2 PF04013.12 gi|21228636|ref|NP_634558.1| - 5.5e-61 205.7 0.0 6.2e-61 205.6 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase THUMP PF02926.17 gi|21228637|ref|NP_634559.1| - 3.9e-12 46.5 0.8 8.7e-12 45.4 0.1 1.9 2 1 0 2 2 2 1 THUMP domain Ribosomal_L21e PF01157.18 gi|21228638|ref|NP_634560.1| - 6.2e-34 115.9 0.6 6.8e-34 115.7 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.16 gi|21228639|ref|NP_634561.1| - 7.1e-10 39.3 2.2 9.8e-10 38.8 2.2 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb4 FumaraseC_C PF10415.9 gi|21228639|ref|NP_634561.1| - 0.22 12.0 3.0 1 9.8 0.0 2.8 2 1 1 3 3 3 0 Fumarase C C-terminus DUF655 PF04919.12 gi|21228640|ref|NP_634562.1| - 2.6e-66 223.0 0.1 3.1e-66 222.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|21228640|ref|NP_634562.1| - 0.0011 19.2 0.0 0.0045 17.2 0.0 1.8 1 1 1 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|21228640|ref|NP_634562.1| - 0.0029 17.8 0.0 0.021 15.1 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif RrnaAD PF00398.20 gi|21228641|ref|NP_634563.1| - 8.9e-40 136.4 0.1 9.7e-40 136.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.14 gi|21228642|ref|NP_634564.1| - 1.1e-08 34.8 0.0 6.4e-06 25.8 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|21228642|ref|NP_634564.1| - 1e-05 26.2 0.0 0.00015 22.4 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|21228642|ref|NP_634564.1| - 8.1e-05 22.5 0.0 0.0003 20.6 0.0 1.9 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 gi|21228642|ref|NP_634564.1| - 8.2e-05 22.5 0.0 0.0016 18.3 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228642|ref|NP_634564.1| - 0.00015 22.4 0.0 0.0088 16.7 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21228642|ref|NP_634564.1| - 0.00028 20.7 0.0 0.0004 20.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21228642|ref|NP_634564.1| - 0.00029 21.4 0.0 0.0032 18.1 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|21228642|ref|NP_634564.1| - 0.0037 16.9 0.0 0.0063 16.1 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|21228642|ref|NP_634564.1| - 0.01 15.1 0.0 1.4 8.2 0.0 2.1 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase DUF1269 PF06897.12 gi|21228642|ref|NP_634564.1| - 0.02 15.2 0.0 0.058 13.7 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) Met_10 PF02475.16 gi|21228642|ref|NP_634564.1| - 0.031 14.0 0.0 0.049 13.4 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein FtsJ PF01728.19 gi|21228642|ref|NP_634564.1| - 0.04 14.0 0.0 0.073 13.2 0.0 1.4 1 0 0 1 1 1 0 FtsJ-like methyltransferase DREV PF05219.12 gi|21228642|ref|NP_634564.1| - 0.044 12.9 0.0 0.074 12.1 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase PrmA PF06325.13 gi|21228642|ref|NP_634564.1| - 0.053 12.9 0.0 0.34 10.2 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_24 PF13578.6 gi|21228642|ref|NP_634564.1| - 0.069 14.2 0.0 0.57 11.2 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 gi|21228642|ref|NP_634564.1| - 0.075 12.8 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_10 PF05971.12 gi|21228642|ref|NP_634564.1| - 0.12 11.7 0.0 0.46 9.8 0.0 1.8 1 1 0 1 1 1 0 RNA methyltransferase Cons_hypoth95 PF03602.15 gi|21228642|ref|NP_634564.1| - 0.13 11.9 0.0 0.28 10.8 0.0 1.6 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_32 PF13679.6 gi|21228642|ref|NP_634564.1| - 0.2 11.6 0.0 0.3 11.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain E1-E2_ATPase PF00122.20 gi|21228643|ref|NP_634565.1| - 3e-58 196.3 0.1 3e-58 196.3 0.1 3.0 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|21228643|ref|NP_634565.1| - 2.8e-48 164.0 10.2 2.8e-48 164.0 10.2 2.9 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|21228643|ref|NP_634565.1| - 1.4e-24 87.5 0.2 2.8e-24 86.6 0.2 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|21228643|ref|NP_634565.1| - 5.2e-22 77.3 0.1 1.6e-21 75.8 0.1 1.9 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 gi|21228643|ref|NP_634565.1| - 3.6e-19 68.7 0.0 6.7e-19 67.8 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|21228643|ref|NP_634565.1| - 0.0011 18.7 2.2 0.0041 16.9 1.4 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|21228643|ref|NP_634565.1| - 0.014 15.8 0.0 0.03 14.7 0.0 1.6 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase SieB PF14163.6 gi|21228643|ref|NP_634565.1| - 1.3 8.5 4.9 6.9 6.2 0.3 2.8 3 0 0 3 3 3 0 Super-infection exclusion protein B NUDIX PF00293.28 gi|21228644|ref|NP_634566.1| - 8e-22 77.7 0.0 1.3e-21 77.0 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain zf-NADH-PPase PF09297.11 gi|21228644|ref|NP_634566.1| - 2e-12 46.6 3.9 3e-12 46.0 3.9 1.3 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain NUDIX-like PF09296.11 gi|21228644|ref|NP_634566.1| - 3.5e-10 40.5 0.0 5.8e-10 39.8 0.0 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase-like rudimentary NUDIX domain DZR PF12773.7 gi|21228644|ref|NP_634566.1| - 0.00031 20.7 0.6 0.00055 19.9 0.6 1.3 1 0 0 1 1 1 1 Double zinc ribbon OrfB_Zn_ribbon PF07282.11 gi|21228644|ref|NP_634566.1| - 0.001 19.0 1.2 0.001 19.0 1.2 1.6 2 0 0 2 2 2 1 Putative transposase DNA-binding domain HypA PF01155.19 gi|21228644|ref|NP_634566.1| - 0.0056 16.7 0.4 0.01 15.9 0.4 1.3 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NOB1_Zn_bind PF08772.11 gi|21228644|ref|NP_634566.1| - 0.015 15.4 0.5 0.1 12.8 0.2 2.1 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 gi|21228644|ref|NP_634566.1| - 0.027 14.2 3.9 0.33 10.7 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|21228644|ref|NP_634566.1| - 0.03 13.7 2.0 3 7.4 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|21228644|ref|NP_634566.1| - 0.28 11.1 4.0 2.4 8.2 4.0 2.1 1 1 0 1 1 1 0 Nudix N-terminal zf-RRN7 PF11781.8 gi|21228644|ref|NP_634566.1| - 0.34 10.7 4.0 5 6.9 0.3 2.4 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF35_N PF12172.8 gi|21228644|ref|NP_634566.1| - 0.9 9.5 3.4 1.2 9.1 0.1 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf_UBZ PF18439.1 gi|21228644|ref|NP_634566.1| - 1.1 9.0 3.0 12 5.6 0.4 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger UPF0547 PF10571.9 gi|21228644|ref|NP_634566.1| - 6.7 6.9 8.0 32 4.7 0.2 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 TetR_N PF00440.23 gi|21228648|ref|NP_634570.1| - 1.4e-15 56.8 0.2 2.7e-15 55.9 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|21228648|ref|NP_634570.1| - 0.022 14.9 0.1 0.036 14.2 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase TetR_C_29 PF17938.1 gi|21228648|ref|NP_634570.1| - 0.093 12.8 0.0 0.24 11.5 0.0 1.8 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Fer4 PF00037.27 gi|21228649|ref|NP_634571.1| - 6.2e-11 41.6 17.7 1.3e-06 28.0 4.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21228649|ref|NP_634571.1| - 4.8e-07 29.8 16.0 1.1e-06 28.6 16.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21228649|ref|NP_634571.1| - 8.2e-07 29.5 15.5 0.0042 17.7 2.4 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21228649|ref|NP_634571.1| - 1.9e-06 27.9 14.3 1.9e-06 27.9 14.3 1.8 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21228649|ref|NP_634571.1| - 6.7e-06 26.9 17.0 0.00015 22.7 4.1 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|21228649|ref|NP_634571.1| - 1.9e-05 24.7 11.6 0.0024 18.0 1.7 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21228649|ref|NP_634571.1| - 3.9e-05 24.0 12.0 0.005 17.3 2.8 2.5 2 1 0 2 2 2 2 4Fe-4S dicluster domain Flavodoxin_5 PF12724.7 gi|21228649|ref|NP_634571.1| - 0.0001 22.6 0.0 0.00016 21.9 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Fer4_6 PF12837.7 gi|21228649|ref|NP_634571.1| - 0.0018 18.3 4.2 0.0018 18.3 4.2 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Flavodoxin_3 PF12641.7 gi|21228649|ref|NP_634571.1| - 0.0018 18.0 0.0 0.035 13.8 0.0 2.2 2 0 0 2 2 2 1 Flavodoxin domain FMN_red PF03358.15 gi|21228649|ref|NP_634571.1| - 0.0032 17.2 0.0 0.0081 15.9 0.0 1.8 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_4 PF12682.7 gi|21228649|ref|NP_634571.1| - 0.0034 17.1 0.1 0.34 10.6 0.0 2.5 2 1 1 3 3 3 1 Flavodoxin Fer4_2 PF12797.7 gi|21228649|ref|NP_634571.1| - 0.0039 17.2 3.5 0.0039 17.2 3.5 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21228649|ref|NP_634571.1| - 0.018 15.2 13.3 0.053 13.7 13.3 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Flavodoxin_2 PF02525.17 gi|21228649|ref|NP_634571.1| - 0.041 13.6 0.0 0.062 13.0 0.0 1.4 1 0 0 1 1 1 0 Flavodoxin-like fold Fer4_3 PF12798.7 gi|21228649|ref|NP_634571.1| - 0.081 13.9 7.3 0.081 13.9 7.3 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21228649|ref|NP_634571.1| - 0.42 11.2 21.1 0.14 12.7 2.9 2.6 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21228649|ref|NP_634571.1| - 6.1 7.6 20.8 0.7 10.5 4.7 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain YafQ_toxin PF15738.5 gi|21228651|ref|NP_634573.1| - 0.00077 19.7 2.3 0.00098 19.4 2.3 1.2 1 0 0 1 1 1 1 Bacterial toxin of type II toxin-antitoxin system, YafQ ParE_toxin PF05016.15 gi|21228651|ref|NP_634573.1| - 0.00087 19.9 0.3 0.00096 19.7 0.3 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE Toxin_YhaV PF11663.8 gi|21228651|ref|NP_634573.1| - 0.041 13.9 0.3 0.049 13.7 0.3 1.2 1 0 0 1 1 1 0 Toxin with endonuclease activity, of toxin-antitoxin system DUF2683 PF10884.8 gi|21228652|ref|NP_634574.1| - 2.5e-32 111.0 7.3 2.8e-32 110.8 7.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) CAT PF00302.18 gi|21228653|ref|NP_634575.1| - 8.4e-42 143.4 5.4 9.5e-42 143.2 5.4 1.0 1 0 0 1 1 1 1 Chloramphenicol acetyltransferase Pentapeptide_4 PF13599.6 gi|21228654|ref|NP_634576.1| - 3.1e-23 81.7 11.6 1.5e-09 37.9 10.2 3.1 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide PF00805.22 gi|21228654|ref|NP_634576.1| - 1.4e-16 59.8 10.1 1.4e-07 31.1 0.8 4.3 2 1 1 4 4 4 4 Pentapeptide repeats (8 copies) Pentapeptide_3 PF13576.6 gi|21228654|ref|NP_634576.1| - 1.8e-15 56.8 18.1 7e-08 32.5 5.8 3.8 2 2 2 4 4 4 3 Pentapeptide repeats (9 copies) Beta_helix PF13229.6 gi|21228654|ref|NP_634576.1| - 0.029 14.2 0.1 0.077 12.9 0.1 1.8 1 1 0 1 1 1 0 Right handed beta helix region Lip_prot_lig_C PF10437.9 gi|21228654|ref|NP_634576.1| - 0.051 13.6 0.4 0.19 11.7 0.2 2.0 2 1 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus RRM_3 PF08777.11 gi|21228654|ref|NP_634576.1| - 0.11 12.5 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 RNA binding motif DUF5537 PF17690.1 gi|21228654|ref|NP_634576.1| - 0.23 11.1 2.6 7.3 6.2 2.3 2.8 1 1 1 2 2 2 0 Family of unknown function (DUF5537) Abhydrolase_1 PF00561.20 gi|21228655|ref|NP_634577.1| - 1.6e-20 73.9 1.1 6.3e-18 65.3 1.1 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|21228655|ref|NP_634577.1| - 9e-12 46.1 0.0 1.2e-11 45.7 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|21228655|ref|NP_634577.1| - 1.4e-10 40.9 0.2 5.1e-10 39.0 0.1 1.9 2 1 0 2 2 2 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|21228655|ref|NP_634577.1| - 1.4e-06 27.2 0.0 4.3e-06 25.6 0.0 1.7 2 0 0 2 2 2 1 Ndr family Abhydrolase_4 PF08386.10 gi|21228655|ref|NP_634577.1| - 3.5e-06 27.1 0.0 6.7e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 TAP-like protein Esterase_phd PF10503.9 gi|21228655|ref|NP_634577.1| - 0.00016 21.3 0.1 0.012 15.2 0.1 2.2 2 0 0 2 2 2 1 Esterase PHB depolymerase Peptidase_S9 PF00326.21 gi|21228655|ref|NP_634577.1| - 0.00028 20.4 0.1 0.46 9.9 0.1 2.3 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_5 PF12695.7 gi|21228655|ref|NP_634577.1| - 0.002 17.9 0.1 0.54 10.0 0.0 2.2 2 0 0 2 2 2 2 Alpha/beta hydrolase family Ser_hydrolase PF06821.13 gi|21228655|ref|NP_634577.1| - 0.0044 16.9 0.0 0.015 15.2 0.0 1.8 2 0 0 2 2 2 1 Serine hydrolase Abhydrolase_3 PF07859.13 gi|21228655|ref|NP_634577.1| - 0.006 16.5 0.5 0.1 12.4 0.5 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 gi|21228655|ref|NP_634577.1| - 0.0072 15.9 0.0 0.31 10.5 0.0 2.1 2 0 0 2 2 2 1 Dienelactone hydrolase family BAAT_C PF08840.11 gi|21228655|ref|NP_634577.1| - 0.01 15.8 0.3 0.098 12.6 0.3 2.0 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF915 PF06028.11 gi|21228655|ref|NP_634577.1| - 0.027 13.8 0.0 0.1 11.9 0.0 1.9 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) DUF1057 PF06342.12 gi|21228655|ref|NP_634577.1| - 0.037 13.1 0.0 0.056 12.5 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) DUF2048 PF09752.9 gi|21228655|ref|NP_634577.1| - 0.15 11.1 0.1 0.37 9.8 0.1 1.7 1 1 0 1 1 1 0 Abhydrolase domain containing 18 Acetyltransf_7 PF13508.7 gi|21228656|ref|NP_634578.1| - 9.9e-10 38.7 0.1 1.6e-09 38.0 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21228656|ref|NP_634578.1| - 6.7e-09 36.0 0.0 1.1e-08 35.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 gi|21228656|ref|NP_634578.1| - 1.4e-06 28.4 0.2 2.3e-06 27.7 0.0 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21228656|ref|NP_634578.1| - 1.7e-05 24.8 0.0 4e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain MOZ_SAS PF01853.18 gi|21228656|ref|NP_634578.1| - 0.0062 16.2 0.0 0.01 15.5 0.0 1.3 1 0 0 1 1 1 1 MOZ/SAS family Acetyltransf_CG PF14542.6 gi|21228656|ref|NP_634578.1| - 0.058 13.5 0.0 0.14 12.3 0.0 1.7 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase DEAD PF00270.29 gi|21228658|ref|NP_634580.1| - 3.2e-51 173.6 0.3 7.7e-51 172.3 0.1 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|21228658|ref|NP_634580.1| - 3.3e-34 117.6 0.9 6.3e-32 110.2 0.2 3.1 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|21228658|ref|NP_634580.1| - 1.3e-11 44.8 0.1 6e-11 42.6 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 gi|21228658|ref|NP_634580.1| - 6.4e-05 22.3 0.2 0.00011 21.6 0.2 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase UTP25 PF06862.12 gi|21228658|ref|NP_634580.1| - 0.00021 20.2 0.0 0.82 8.4 0.0 3.1 2 1 1 3 3 3 2 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 CMS1 PF14617.6 gi|21228658|ref|NP_634580.1| - 0.00033 20.1 0.1 0.00074 18.9 0.1 1.7 1 1 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit AAA_19 PF13245.6 gi|21228658|ref|NP_634580.1| - 0.0022 18.4 0.0 0.041 14.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain Flavi_DEAD PF07652.14 gi|21228658|ref|NP_634580.1| - 0.019 15.0 0.1 0.12 12.4 0.0 2.4 1 1 1 2 2 2 0 Flavivirus DEAD domain AAA_22 PF13401.6 gi|21228658|ref|NP_634580.1| - 0.028 14.7 0.1 0.13 12.6 0.1 2.1 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|21228658|ref|NP_634580.1| - 0.039 13.7 0.0 0.16 11.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain V-ATPase_H_C PF11698.8 gi|21228658|ref|NP_634580.1| - 0.1 12.7 2.6 0.22 11.7 0.0 2.7 3 1 1 4 4 4 0 V-ATPase subunit H Catalase PF00199.19 gi|21228659|ref|NP_634581.1| - 2e-184 613.1 2.1 2.4e-184 612.8 2.1 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 gi|21228659|ref|NP_634581.1| - 2e-21 75.9 0.0 4.7e-21 74.8 0.0 1.6 1 0 0 1 1 1 1 Catalase-related immune-responsive DUF262 PF03235.14 gi|21228661|ref|NP_634583.1| - 2.3e-22 80.3 7.7 6e-22 78.9 0.3 3.6 2 2 0 2 2 2 1 Protein of unknown function DUF262 ParBc PF02195.18 gi|21228661|ref|NP_634583.1| - 0.046 14.0 0.0 0.11 12.8 0.0 1.6 1 0 0 1 1 1 0 ParB-like nuclease domain HEPN_RiboL-PSP PF18735.1 gi|21228662|ref|NP_634584.1| - 4.7e-26 91.9 7.4 5.6e-26 91.7 7.4 1.1 1 0 0 1 1 1 1 RiboL-PSP-HEPN HEPN_MAE_28990 PF18737.1 gi|21228662|ref|NP_634584.1| - 7.6e-12 45.6 3.7 1e-11 45.2 3.7 1.1 1 0 0 1 1 1 1 MAE_28990/MAE_18760-like HEPN DUF86 PF01934.17 gi|21228662|ref|NP_634584.1| - 0.021 14.7 0.1 0.12 12.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF86 MlaA PF04333.13 gi|21228662|ref|NP_634584.1| - 0.12 12.1 0.3 1.6 8.4 0.1 2.2 2 0 0 2 2 2 0 MlaA lipoprotein HEPN_Apea PF18739.1 gi|21228662|ref|NP_634584.1| - 0.16 12.4 1.4 0.46 10.9 1.4 2.0 1 1 0 1 1 1 0 Apea-like HEPN RsgA_GTPase PF03193.16 gi|21228663|ref|NP_634585.1| - 9.8e-46 155.7 0.0 1.5e-45 155.1 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase ABC_tran PF00005.27 gi|21228663|ref|NP_634585.1| - 1.8e-09 38.2 0.1 4.3e-09 37.0 0.1 1.5 1 1 0 1 1 1 1 ABC transporter MMR_HSR1 PF01926.23 gi|21228663|ref|NP_634585.1| - 6.4e-09 35.9 0.0 1.1e-08 35.1 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|21228663|ref|NP_634585.1| - 1.4e-05 24.6 0.1 0.025 14.1 0.0 2.6 2 0 0 2 2 2 2 Ferrous iron transport protein B Septin PF00735.18 gi|21228663|ref|NP_634585.1| - 1.8e-05 24.2 0.0 2.9e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Septin Dynamin_N PF00350.23 gi|21228663|ref|NP_634585.1| - 3.1e-05 24.1 1.4 0.0036 17.4 0.9 2.5 1 1 1 2 2 2 1 Dynamin family AIG1 PF04548.16 gi|21228663|ref|NP_634585.1| - 0.00025 20.5 0.1 0.00046 19.6 0.1 1.4 1 0 0 1 1 1 1 AIG1 family PduV-EutP PF10662.9 gi|21228663|ref|NP_634585.1| - 0.00029 20.6 0.2 0.25 11.1 0.0 2.6 2 1 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation GTP_EFTU PF00009.27 gi|21228663|ref|NP_634585.1| - 0.0011 18.5 0.1 0.81 9.2 0.0 2.6 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain AAA_16 PF13191.6 gi|21228663|ref|NP_634585.1| - 0.0012 19.3 0.1 0.0025 18.2 0.0 1.6 2 0 0 2 2 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|21228663|ref|NP_634585.1| - 0.0033 17.1 0.1 0.0068 16.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 gi|21228663|ref|NP_634585.1| - 0.0067 16.6 0.0 0.018 15.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain Roc PF08477.13 gi|21228663|ref|NP_634585.1| - 0.018 15.3 0.1 0.051 13.8 0.1 1.8 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_25 PF13481.6 gi|21228663|ref|NP_634585.1| - 0.019 14.5 0.0 0.034 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 gi|21228663|ref|NP_634585.1| - 0.024 14.2 0.2 0.74 9.4 0.1 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|21228663|ref|NP_634585.1| - 0.03 13.3 0.2 0.06 12.3 0.2 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF87 PF01935.17 gi|21228663|ref|NP_634585.1| - 0.033 14.3 0.5 0.17 12.0 0.2 2.0 2 0 0 2 2 2 0 Helicase HerA, central domain KAP_NTPase PF07693.14 gi|21228663|ref|NP_634585.1| - 0.041 13.1 0.0 0.21 10.8 0.0 1.9 2 0 0 2 2 2 0 KAP family P-loop domain AAA_7 PF12775.7 gi|21228663|ref|NP_634585.1| - 0.041 13.4 0.1 0.078 12.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 gi|21228663|ref|NP_634585.1| - 0.072 13.4 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|21228663|ref|NP_634585.1| - 0.099 13.1 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_N PF16745.5 gi|21228663|ref|NP_634585.1| - 0.12 12.2 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 RsgA N-terminal domain DUF815 PF05673.13 gi|21228663|ref|NP_634585.1| - 0.13 11.4 0.1 0.24 10.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) RNA_helicase PF00910.22 gi|21228663|ref|NP_634585.1| - 0.13 12.6 0.0 0.26 11.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Guanylate_kin PF00625.21 gi|21228663|ref|NP_634585.1| - 0.14 11.8 0.0 0.3 10.7 0.0 1.6 1 0 0 1 1 1 0 Guanylate kinase NB-ARC PF00931.22 gi|21228663|ref|NP_634585.1| - 0.17 11.0 0.1 0.26 10.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain PMBR PF09373.10 gi|21228663|ref|NP_634585.1| - 0.19 12.0 0.4 0.61 10.3 0.2 2.0 2 0 0 2 2 2 0 Pseudomurein-binding repeat TPR_12 PF13424.6 gi|21228664|ref|NP_634586.1| - 1.4e-31 108.6 29.5 5.6e-05 23.4 0.1 12.7 10 5 0 10 10 10 5 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21228664|ref|NP_634586.1| - 1.9e-20 71.3 27.7 0.032 14.2 0.0 12.3 14 0 0 14 14 13 6 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21228664|ref|NP_634586.1| - 8.9e-20 69.6 41.8 0.0089 15.8 0.0 14.6 16 1 0 16 16 16 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21228664|ref|NP_634586.1| - 7.1e-17 60.7 17.4 0.0033 17.2 0.0 11.0 11 0 0 11 11 11 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21228664|ref|NP_634586.1| - 1.1e-15 56.4 49.8 0.037 14.2 0.0 15.2 17 0 0 17 17 17 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21228664|ref|NP_634586.1| - 3.3e-13 48.7 58.0 0.3 11.4 0.9 15.8 16 2 1 17 17 17 5 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21228664|ref|NP_634586.1| - 4.4e-13 48.6 8.4 1.1 9.8 0.3 10.5 10 2 0 10 10 10 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21228664|ref|NP_634586.1| - 7.9e-10 38.7 15.1 0.75 10.8 0.0 12.1 9 4 4 13 13 12 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21228664|ref|NP_634586.1| - 8.5e-10 39.1 1.7 0.18 12.5 0.0 8.2 9 1 0 9 9 6 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21228664|ref|NP_634586.1| - 7.1e-08 32.9 10.8 0.054 14.0 0.0 8.4 8 3 1 9 9 7 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21228664|ref|NP_634586.1| - 1.5e-05 25.3 22.0 0.9 10.3 0.0 11.2 14 3 1 15 15 10 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|21228664|ref|NP_634586.1| - 0.0001 21.8 0.1 2.3 7.5 0.1 4.3 3 1 1 4 4 4 2 MalT-like TPR region DUF2225 PF09986.9 gi|21228664|ref|NP_634586.1| - 0.00012 21.8 27.9 0.21 11.3 0.6 7.0 3 2 1 6 6 6 2 Uncharacterized protein conserved in bacteria (DUF2225) Peripla_BP_2 PF01497.18 gi|21228664|ref|NP_634586.1| - 0.0013 18.4 2.0 0.6 9.6 0.1 3.5 3 0 0 3 3 3 1 Periplasmic binding protein TOM20_plant PF06552.12 gi|21228664|ref|NP_634586.1| - 0.0024 17.7 11.7 7.2 6.3 0.0 7.0 8 1 1 9 9 9 1 Plant specific mitochondrial import receptor subunit TOM20 T6SS_VasJ PF16989.5 gi|21228664|ref|NP_634586.1| - 0.041 13.4 2.2 3.4 7.1 0.0 2.8 3 0 0 3 3 3 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ RRM_1 PF00076.22 gi|21228664|ref|NP_634586.1| - 0.28 11.0 1.8 1.6 8.6 0.0 3.2 4 0 0 4 4 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TPR_21 PF09976.9 gi|21228664|ref|NP_634586.1| - 0.55 9.9 9.4 2.7 7.7 0.4 5.2 6 2 1 7 7 7 0 Tetratricopeptide repeat-like domain TPR_11 PF13414.6 gi|21228664|ref|NP_634586.1| - 0.79 9.5 25.0 17 5.2 0.2 9.8 11 1 1 12 12 12 0 TPR repeat DUF4404 PF14357.6 gi|21228664|ref|NP_634586.1| - 4.4 8.0 10.2 21 5.8 0.0 5.7 5 1 1 7 7 7 0 Domain of unknown function (DUF4404) DUF362 PF04015.12 gi|21228665|ref|NP_634587.1| - 1.5e-46 159.3 0.1 1.8e-46 159.0 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|21228665|ref|NP_634587.1| - 8.8e-17 60.2 17.7 1.8e-08 33.9 5.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21228665|ref|NP_634587.1| - 6e-13 49.2 36.1 2.2e-08 34.6 12.6 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21228665|ref|NP_634587.1| - 8.8e-13 47.7 15.6 1.9e-06 27.7 4.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21228665|ref|NP_634587.1| - 6.2e-11 42.3 26.6 9.3e-09 35.3 13.0 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21228665|ref|NP_634587.1| - 3.7e-10 39.8 21.9 2.5e-08 33.9 11.3 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21228665|ref|NP_634587.1| - 6.6e-09 35.8 12.5 5.2e-05 23.3 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21228665|ref|NP_634587.1| - 1e-08 34.8 14.6 4.1e-05 23.4 3.5 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21228665|ref|NP_634587.1| - 1.1e-08 35.9 11.5 0.00013 22.8 2.9 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|21228665|ref|NP_634587.1| - 1.4e-06 28.3 12.4 0.0041 17.5 3.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21228665|ref|NP_634587.1| - 7.4e-06 26.6 24.9 0.0022 18.8 5.9 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Lar_N PF09861.9 gi|21228665|ref|NP_634587.1| - 0.00015 21.0 0.3 0.00023 20.4 0.3 1.3 1 0 0 1 1 1 1 Lactate racemase N-terminal domain Fer4_13 PF13370.6 gi|21228665|ref|NP_634587.1| - 0.00024 21.6 13.4 0.046 14.3 3.1 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|21228665|ref|NP_634587.1| - 0.00077 20.3 8.2 0.077 13.8 0.8 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21228665|ref|NP_634587.1| - 0.0023 18.4 15.0 0.11 13.1 2.5 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21228665|ref|NP_634587.1| - 0.0025 18.3 16.0 0.042 14.3 2.4 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21228665|ref|NP_634587.1| - 0.0035 17.5 13.4 0.19 12.0 12.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain MinC_C PF03775.16 gi|21228665|ref|NP_634587.1| - 0.13 12.3 0.2 0.23 11.5 0.2 1.4 1 0 0 1 1 1 0 Septum formation inhibitor MinC, C-terminal domain Fer4_15 PF13459.6 gi|21228665|ref|NP_634587.1| - 0.18 12.6 12.3 1.1 10.1 2.3 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain DUF498 PF04430.14 gi|21228666|ref|NP_634588.1| - 2.2e-11 43.8 0.0 2.6e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) Radical_SAM PF04055.21 gi|21228667|ref|NP_634589.1| - 2.6e-20 73.5 0.0 5.9e-20 72.3 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily DZR PF12773.7 gi|21228667|ref|NP_634589.1| - 0.001 19.1 0.2 0.001 19.1 0.2 3.0 3 1 0 3 3 2 1 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|21228667|ref|NP_634589.1| - 0.027 14.0 1.1 2.9 7.5 0.0 2.9 2 0 0 2 2 2 0 TFIIB zinc-binding GFA PF04828.14 gi|21228667|ref|NP_634589.1| - 0.027 14.8 1.6 6.4 7.2 0.0 3.7 3 1 1 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme DNA_ligase_ZBD PF03119.16 gi|21228667|ref|NP_634589.1| - 0.034 14.2 2.4 1.4 9.0 0.1 3.0 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain YhfH PF14149.6 gi|21228667|ref|NP_634589.1| - 0.039 13.9 6.0 0.11 12.5 0.3 3.3 3 0 0 3 3 3 0 YhfH-like protein Zn-ribbon_8 PF09723.10 gi|21228667|ref|NP_634589.1| - 0.097 12.8 13.8 0.7 10.1 0.3 4.2 3 1 1 4 4 4 0 Zinc ribbon domain Fer4_12 PF13353.6 gi|21228667|ref|NP_634589.1| - 0.12 12.6 0.0 0.3 11.3 0.0 1.7 1 0 0 1 1 1 0 4Fe-4S single cluster domain zf-IS66 PF13005.7 gi|21228667|ref|NP_634589.1| - 0.18 12.2 6.9 12 6.4 0.2 3.9 4 0 0 4 4 3 0 zinc-finger binding domain of transposase IS66 zf-ribbon_3 PF13248.6 gi|21228667|ref|NP_634589.1| - 0.31 10.5 0.1 0.31 10.5 0.1 3.9 5 0 0 5 5 5 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|21228667|ref|NP_634589.1| - 0.33 10.6 0.1 0.33 10.6 0.1 2.9 3 0 0 3 3 2 0 Ubiquitin-Binding Zinc Finger zf-C4_Topoisom PF01396.19 gi|21228667|ref|NP_634589.1| - 0.35 10.7 9.7 1.1 9.1 0.0 3.5 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf_C2H2_10 PF18414.1 gi|21228667|ref|NP_634589.1| - 0.35 10.5 4.3 0.27 10.8 0.8 2.5 2 0 0 2 2 2 0 C2H2 type zinc-finger zinc_ribbon_2 PF13240.6 gi|21228667|ref|NP_634589.1| - 0.61 9.9 16.3 1 9.2 0.2 4.6 5 0 0 5 5 5 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|21228667|ref|NP_634589.1| - 0.64 9.9 0.0 0.64 9.9 0.0 3.6 4 0 0 4 4 4 0 RNA polymerases M/15 Kd subunit ADK_lid PF05191.14 gi|21228667|ref|NP_634589.1| - 0.72 9.9 5.1 6.1 6.9 0.0 3.1 3 0 0 3 3 3 0 Adenylate kinase, active site lid zf-ACC PF17848.1 gi|21228667|ref|NP_634589.1| - 1.8 8.7 7.8 11 6.3 0.1 3.3 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain zf-4CXXC_R1 PF10497.9 gi|21228667|ref|NP_634589.1| - 9.8 6.5 8.7 3.5 7.9 0.0 3.0 2 1 0 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 CbiA PF01656.23 gi|21228668|ref|NP_634590.1| - 2e-13 50.5 0.0 3e-13 49.9 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|21228668|ref|NP_634590.1| - 1e-08 34.9 0.2 4.8e-08 32.8 0.1 2.1 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|21228668|ref|NP_634590.1| - 7.5e-07 29.2 0.1 1.2e-06 28.6 0.1 1.6 1 1 0 1 1 1 1 AAA domain CBP_BcsQ PF06564.12 gi|21228668|ref|NP_634590.1| - 9e-07 28.6 0.0 0.00018 21.0 0.0 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ APS_kinase PF01583.20 gi|21228668|ref|NP_634590.1| - 2.1e-06 27.7 0.0 3.3e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase Fer4_NifH PF00142.18 gi|21228668|ref|NP_634590.1| - 8e-06 25.5 0.1 2.8e-05 23.7 0.1 1.9 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|21228668|ref|NP_634590.1| - 2.7e-05 23.5 0.2 5.5e-05 22.5 0.2 1.5 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.11 gi|21228668|ref|NP_634590.1| - 5e-05 22.7 0.0 0.00024 20.5 0.0 1.9 2 0 0 2 2 2 1 ATPase MipZ SRP54 PF00448.22 gi|21228668|ref|NP_634590.1| - 6.4e-05 22.7 0.1 0.00069 19.3 0.1 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain KTI12 PF08433.10 gi|21228668|ref|NP_634590.1| - 0.00018 21.1 0.0 0.00029 20.4 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_25 PF13481.6 gi|21228668|ref|NP_634590.1| - 0.00024 20.7 0.0 0.0018 17.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain CLP1_P PF16575.5 gi|21228668|ref|NP_634590.1| - 0.00026 20.9 0.0 0.00097 19.0 0.0 1.8 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop Zeta_toxin PF06414.12 gi|21228668|ref|NP_634590.1| - 0.00059 19.2 0.1 0.0011 18.3 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_16 PF13191.6 gi|21228668|ref|NP_634590.1| - 0.0009 19.7 0.0 0.038 14.4 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain DUF87 PF01935.17 gi|21228668|ref|NP_634590.1| - 0.0011 19.2 0.1 0.0023 18.1 0.1 1.5 2 0 0 2 2 1 1 Helicase HerA, central domain AAA_18 PF13238.6 gi|21228668|ref|NP_634590.1| - 0.0021 18.6 0.0 0.0042 17.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|21228668|ref|NP_634590.1| - 0.0036 17.4 0.1 1.1 9.3 0.0 2.3 2 0 0 2 2 2 1 50S ribosome-binding GTPase TrkA_N PF02254.18 gi|21228668|ref|NP_634590.1| - 0.0066 16.7 0.0 0.24 11.6 0.0 2.4 2 0 0 2 2 2 1 TrkA-N domain ATP_bind_1 PF03029.17 gi|21228668|ref|NP_634590.1| - 0.0072 16.1 0.1 0.028 14.2 0.0 2.0 3 0 0 3 3 3 1 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 gi|21228668|ref|NP_634590.1| - 0.0076 16.0 0.1 0.019 14.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain GTP_EFTU PF00009.27 gi|21228668|ref|NP_634590.1| - 0.008 15.7 0.0 0.42 10.1 0.0 2.1 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain TrwB_AAD_bind PF10412.9 gi|21228668|ref|NP_634590.1| - 0.0091 14.9 0.0 0.056 12.3 0.0 2.0 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_33 PF13671.6 gi|21228668|ref|NP_634590.1| - 0.0099 16.0 0.0 0.017 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|21228668|ref|NP_634590.1| - 0.01 15.5 0.0 0.043 13.5 0.0 2.0 2 0 0 2 2 2 0 Thymidylate kinase ATPase PF06745.13 gi|21228668|ref|NP_634590.1| - 0.012 15.0 0.0 0.026 13.8 0.0 1.6 1 0 0 1 1 1 0 KaiC MobB PF03205.14 gi|21228668|ref|NP_634590.1| - 0.014 15.3 0.0 0.038 13.9 0.0 1.7 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B MeaB PF03308.16 gi|21228668|ref|NP_634590.1| - 0.015 14.3 0.1 0.029 13.4 0.1 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_30 PF13604.6 gi|21228668|ref|NP_634590.1| - 0.016 15.0 0.1 0.043 13.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|21228668|ref|NP_634590.1| - 0.023 15.1 0.0 0.079 13.4 0.0 1.9 2 0 0 2 2 2 0 RNA helicase AAA_26 PF13500.6 gi|21228668|ref|NP_634590.1| - 0.045 13.6 0.1 0.64 9.8 0.2 2.1 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|21228668|ref|NP_634590.1| - 0.048 13.7 0.0 0.081 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 gi|21228668|ref|NP_634590.1| - 0.052 14.1 0.0 0.098 13.2 0.0 1.6 1 0 0 1 1 1 0 ABC transporter IstB_IS21 PF01695.17 gi|21228668|ref|NP_634590.1| - 0.055 13.2 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_10 PF12846.7 gi|21228668|ref|NP_634590.1| - 0.058 12.3 0.1 0.18 10.7 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain Mur_ligase_M PF08245.12 gi|21228668|ref|NP_634590.1| - 0.072 13.1 0.0 3.3 7.7 0.0 2.3 2 0 0 2 2 2 0 Mur ligase middle domain AAA_29 PF13555.6 gi|21228668|ref|NP_634590.1| - 0.08 12.7 0.1 0.14 11.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain NTPase_1 PF03266.15 gi|21228668|ref|NP_634590.1| - 0.12 12.3 0.1 0.34 10.8 0.0 1.8 2 0 0 2 2 1 0 NTPase LpxK PF02606.14 gi|21228668|ref|NP_634590.1| - 0.12 11.4 0.1 0.32 10.1 0.1 1.5 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase Helicase_RecD PF05127.14 gi|21228668|ref|NP_634590.1| - 0.15 11.9 0.0 0.63 9.9 0.0 1.9 2 0 0 2 2 2 0 Helicase AAA_28 PF13521.6 gi|21228668|ref|NP_634590.1| - 0.15 12.3 0.0 0.71 10.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain Sigma54_activ_2 PF14532.6 gi|21228668|ref|NP_634590.1| - 0.19 11.8 0.0 11 6.1 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain SBP_bac_5 PF00496.22 gi|21228669|ref|NP_634591.1| - 1.9e-91 306.8 0.0 2.5e-91 306.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle YjcZ_2 PF09680.10 gi|21228669|ref|NP_634591.1| - 0.04 13.6 0.6 0.074 12.7 0.6 1.4 1 0 0 1 1 1 0 Family of unknown function BPD_transp_1 PF00528.22 gi|21228670|ref|NP_634592.1| - 9.4e-47 159.1 12.1 9.4e-47 159.1 12.1 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3693 PF12472.8 gi|21228670|ref|NP_634592.1| - 0.028 14.1 0.0 0.028 14.1 0.0 2.7 3 0 0 3 3 3 0 Phage related protein OppC_N PF12911.7 gi|21228670|ref|NP_634592.1| - 0.43 10.6 0.0 0.43 10.6 0.0 3.1 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|21228671|ref|NP_634593.1| - 4.4e-29 101.5 9.1 4.4e-29 101.5 9.1 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|21228671|ref|NP_634593.1| - 2.5e-08 33.8 0.0 2.5e-08 33.8 0.0 3.0 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 gi|21228672|ref|NP_634594.1| - 8.9e-24 84.6 0.0 1.4e-23 84.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|21228672|ref|NP_634594.1| - 3e-12 46.9 0.5 5.4e-12 46.0 0.5 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|21228672|ref|NP_634594.1| - 0.00079 19.3 0.0 0.35 10.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|21228672|ref|NP_634594.1| - 0.019 15.3 1.6 0.11 12.8 1.6 2.0 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|21228672|ref|NP_634594.1| - 0.024 15.2 0.0 0.031 14.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|21228672|ref|NP_634594.1| - 0.029 13.8 0.0 0.073 12.5 0.0 1.6 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain TsaE PF02367.17 gi|21228672|ref|NP_634594.1| - 0.046 13.7 0.4 0.082 12.9 0.4 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 gi|21228672|ref|NP_634594.1| - 0.068 13.1 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|21228672|ref|NP_634594.1| - 0.074 12.8 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|21228672|ref|NP_634594.1| - 0.097 12.4 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 gi|21228672|ref|NP_634594.1| - 0.11 13.1 0.1 0.57 10.7 0.0 2.2 3 0 0 3 3 3 0 AAA domain AAA_16 PF13191.6 gi|21228672|ref|NP_634594.1| - 0.17 12.3 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|21228672|ref|NP_634594.1| - 0.17 12.3 0.1 0.28 11.6 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|21228672|ref|NP_634594.1| - 0.18 12.2 0.1 0.31 11.4 0.1 1.4 1 0 0 1 1 1 0 RNA helicase ABC_tran PF00005.27 gi|21228673|ref|NP_634595.1| - 2.6e-31 109.0 0.0 3.3e-31 108.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21228673|ref|NP_634595.1| - 1.2e-07 31.9 0.2 0.001 19.0 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21228673|ref|NP_634595.1| - 5.1e-05 22.8 0.0 9.5e-05 21.9 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|21228673|ref|NP_634595.1| - 0.00016 22.0 0.3 0.003 17.9 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|21228673|ref|NP_634595.1| - 0.0021 18.4 0.2 0.0046 17.3 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|21228673|ref|NP_634595.1| - 0.005 16.6 0.1 0.011 15.5 0.0 1.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|21228673|ref|NP_634595.1| - 0.021 14.7 0.0 0.036 14.0 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase G-alpha PF00503.20 gi|21228673|ref|NP_634595.1| - 0.028 13.6 0.0 0.028 13.6 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit NB-ARC PF00931.22 gi|21228673|ref|NP_634595.1| - 0.031 13.5 0.0 0.06 12.5 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain TniB PF05621.11 gi|21228673|ref|NP_634595.1| - 0.044 13.2 0.0 1.4 8.3 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein AAA_5 PF07728.14 gi|21228673|ref|NP_634595.1| - 0.092 12.7 0.1 0.26 11.3 0.1 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 gi|21228673|ref|NP_634595.1| - 0.11 12.4 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain GlnE PF03710.15 gi|21228673|ref|NP_634595.1| - 0.17 11.3 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Glutamate-ammonia ligase adenylyltransferase AAA_25 PF13481.6 gi|21228673|ref|NP_634595.1| - 0.2 11.2 0.0 4.4 6.8 0.0 2.2 2 1 0 2 2 2 0 AAA domain Methyltransf_2 PF00891.18 gi|21228674|ref|NP_634596.1| - 3.4e-12 46.1 0.0 5.4e-12 45.5 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain Dimerisation2 PF16864.5 gi|21228674|ref|NP_634596.1| - 8.3e-08 32.1 0.0 1.5e-06 28.1 0.0 2.3 2 0 0 2 2 2 1 Dimerisation domain Methyltransf_12 PF08242.12 gi|21228674|ref|NP_634596.1| - 0.0062 17.3 0.0 0.015 16.0 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|21228674|ref|NP_634596.1| - 0.027 15.2 0.0 0.056 14.1 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain HTH_20 PF12840.7 gi|21228674|ref|NP_634596.1| - 0.13 12.3 0.1 0.79 9.8 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|21228675|ref|NP_634597.1| - 7.2e-19 67.7 0.6 1.1e-18 67.1 0.6 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|21228675|ref|NP_634597.1| - 4.9e-16 58.6 1.1 9.5e-16 57.6 1.1 1.5 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_24 PF13412.6 gi|21228675|ref|NP_634597.1| - 7.8e-05 22.2 0.0 0.00015 21.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_micro PF17007.5 gi|21228675|ref|NP_634597.1| - 0.00012 21.0 1.3 0.00013 20.9 0.5 1.6 1 1 1 2 2 2 1 HTH-like LexA_DNA_bind PF01726.16 gi|21228675|ref|NP_634597.1| - 0.00012 21.7 0.0 0.00022 20.9 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain MarR PF01047.22 gi|21228675|ref|NP_634597.1| - 0.0002 21.2 0.0 0.00041 20.2 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|21228675|ref|NP_634597.1| - 0.00067 19.5 0.0 0.0014 18.4 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|21228675|ref|NP_634597.1| - 0.00079 19.3 0.0 0.0016 18.3 0.0 1.6 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|21228675|ref|NP_634597.1| - 0.002 18.4 0.0 0.0034 17.7 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_45 PF14947.6 gi|21228675|ref|NP_634597.1| - 0.003 17.5 1.2 0.0054 16.7 0.7 1.6 1 1 1 2 2 2 1 Winged helix-turn-helix HTH_12 PF08461.10 gi|21228675|ref|NP_634597.1| - 0.0038 17.2 0.3 0.014 15.3 0.3 2.0 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain Penicillinase_R PF03965.16 gi|21228675|ref|NP_634597.1| - 0.0045 17.3 0.0 0.015 15.6 0.0 1.9 1 1 0 1 1 1 1 Penicillinase repressor TrmB PF01978.19 gi|21228675|ref|NP_634597.1| - 0.0055 16.6 0.1 0.012 15.5 0.1 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_40 PF14493.6 gi|21228675|ref|NP_634597.1| - 0.0074 16.7 0.0 0.017 15.6 0.0 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|21228675|ref|NP_634597.1| - 0.011 15.5 0.0 0.032 14.0 0.0 1.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain Swi6_N PF18530.1 gi|21228675|ref|NP_634597.1| - 0.02 15.1 0.1 0.032 14.4 0.1 1.4 1 0 0 1 1 1 0 Swi6 N-terminal domain HTH_6 PF01418.17 gi|21228675|ref|NP_634597.1| - 0.046 13.7 0.0 0.082 12.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family FeoC PF09012.10 gi|21228675|ref|NP_634597.1| - 0.05 13.7 0.0 0.16 12.1 0.0 1.8 1 1 1 2 2 2 0 FeoC like transcriptional regulator Mrr_N PF14338.6 gi|21228675|ref|NP_634597.1| - 0.069 13.3 0.1 0.16 12.2 0.1 1.6 1 0 0 1 1 1 0 Mrr N-terminal domain CENP-B_N PF04218.13 gi|21228675|ref|NP_634597.1| - 0.077 12.7 0.0 0.2 11.3 0.0 1.7 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain HTH_Crp_2 PF13545.6 gi|21228675|ref|NP_634597.1| - 0.078 13.0 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_DeoR PF08220.12 gi|21228675|ref|NP_634597.1| - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_27 PF13463.6 gi|21228675|ref|NP_634597.1| - 0.14 12.7 0.1 0.49 10.9 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_46 PF15977.5 gi|21228675|ref|NP_634597.1| - 0.16 12.0 0.0 2.5 8.2 0.0 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA binding DDRGK PF09756.9 gi|21228675|ref|NP_634597.1| - 0.16 11.6 3.9 0.84 9.2 0.0 2.8 1 1 1 2 2 2 0 DDRGK domain FeoC PF09012.10 gi|21228676|ref|NP_634598.1| - 1.7e-16 60.0 3.5 2.1e-16 59.8 3.0 1.4 1 1 0 1 1 1 1 FeoC like transcriptional regulator DUF4423 PF14394.6 gi|21228676|ref|NP_634598.1| - 0.0075 16.0 0.0 0.0096 15.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) DUF2250 PF10007.9 gi|21228676|ref|NP_634598.1| - 0.0093 16.1 0.2 0.059 13.5 0.1 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) FaeA PF04703.12 gi|21228676|ref|NP_634598.1| - 0.031 14.6 0.0 0.047 14.1 0.0 1.2 1 0 0 1 1 1 0 FaeA-like protein MarR PF01047.22 gi|21228676|ref|NP_634598.1| - 0.043 13.8 0.2 0.1 12.6 0.1 1.6 2 0 0 2 2 2 0 MarR family MarR_2 PF12802.7 gi|21228676|ref|NP_634598.1| - 0.072 13.0 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_45 PF14947.6 gi|21228676|ref|NP_634598.1| - 0.17 11.9 0.8 5.5 7.1 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix HTH_24 PF13412.6 gi|21228676|ref|NP_634598.1| - 0.17 11.5 0.0 0.3 10.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding SRTM1 PF15872.5 gi|21228677|ref|NP_634599.1| - 0.065 13.4 0.1 0.083 13.0 0.1 1.3 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 DUF389 PF04087.14 gi|21228677|ref|NP_634599.1| - 0.12 12.4 3.6 1.2 9.2 1.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF389) FeoB_N PF02421.18 gi|21228678|ref|NP_634600.1| - 5.4e-62 207.9 0.5 8.2e-62 207.3 0.5 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|21228678|ref|NP_634600.1| - 3.3e-43 146.5 21.7 1.3e-30 106.0 3.0 2.9 3 0 0 3 3 3 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|21228678|ref|NP_634600.1| - 4.5e-18 65.4 0.1 8.3e-18 64.5 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|21228678|ref|NP_634600.1| - 4.7e-18 64.6 0.6 4.7e-18 64.6 0.6 2.6 2 0 0 2 2 2 1 Ferrous iron transport protein B C terminus FeoB_Cyto PF17910.1 gi|21228678|ref|NP_634600.1| - 2.6e-17 63.1 1.5 5.4e-17 62.1 1.5 1.6 1 0 0 1 1 1 1 FeoB cytosolic helical domain SRPRB PF09439.10 gi|21228678|ref|NP_634600.1| - 0.00014 21.3 0.0 0.00032 20.2 0.0 1.5 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit MeaB PF03308.16 gi|21228678|ref|NP_634600.1| - 0.036 13.0 0.5 3.5 6.5 0.2 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AIG1 PF04548.16 gi|21228678|ref|NP_634600.1| - 0.041 13.2 0.0 0.067 12.5 0.0 1.3 1 0 0 1 1 1 0 AIG1 family Dynamin_N PF00350.23 gi|21228678|ref|NP_634600.1| - 0.057 13.5 0.1 12 5.9 0.0 2.5 2 0 0 2 2 2 0 Dynamin family Arf PF00025.21 gi|21228678|ref|NP_634600.1| - 0.078 12.4 0.1 0.18 11.3 0.1 1.6 1 1 0 1 1 1 0 ADP-ribosylation factor family NTPase_1 PF03266.15 gi|21228678|ref|NP_634600.1| - 0.081 12.8 0.2 0.15 12.0 0.2 1.4 1 0 0 1 1 1 0 NTPase RsgA_GTPase PF03193.16 gi|21228678|ref|NP_634600.1| - 0.18 11.7 0.6 2.9 7.8 0.0 2.4 2 0 0 2 2 2 0 RsgA GTPase FeoA PF04023.14 gi|21228679|ref|NP_634601.1| - 3.6e-19 68.8 0.1 4.2e-19 68.6 0.1 1.1 1 0 0 1 1 1 1 FeoA domain FeoA PF04023.14 gi|21228680|ref|NP_634602.1| - 4.2e-16 59.0 0.1 4.6e-16 58.8 0.1 1.0 1 0 0 1 1 1 1 FeoA domain Transposase_20 PF02371.16 gi|21228681|ref|NP_634603.1| - 1.4e-28 99.0 0.0 3.6e-28 97.7 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|21228681|ref|NP_634603.1| - 9.1e-20 71.1 0.2 2e-19 70.0 0.2 1.6 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.12 gi|21228681|ref|NP_634603.1| - 0.027 14.8 0.0 0.082 13.2 0.0 1.8 1 0 0 1 1 1 0 Orthopoxvirus F14 protein 5_3_exonuc PF01367.20 gi|21228681|ref|NP_634603.1| - 0.21 12.2 2.7 3.3 8.4 0.7 3.3 2 1 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Radical_SAM PF04055.21 gi|21228683|ref|NP_634605.1| - 1.1e-19 71.4 0.0 2.1e-19 70.5 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily DZR PF12773.7 gi|21228683|ref|NP_634605.1| - 0.0012 18.8 0.1 0.0012 18.8 0.1 2.8 2 1 0 2 2 1 1 Double zinc ribbon Fer4_12 PF13353.6 gi|21228683|ref|NP_634605.1| - 0.0037 17.5 0.0 0.0037 17.5 0.0 1.8 2 0 0 2 2 1 1 4Fe-4S single cluster domain YhfH PF14149.6 gi|21228683|ref|NP_634605.1| - 0.018 15.0 0.2 0.018 15.0 0.2 3.3 4 0 0 4 4 3 0 YhfH-like protein zinc_ribbon_2 PF13240.6 gi|21228683|ref|NP_634605.1| - 0.046 13.5 0.2 0.046 13.5 0.2 3.9 4 0 0 4 4 4 0 zinc-ribbon domain zf-C4_Topoisom PF01396.19 gi|21228683|ref|NP_634605.1| - 0.058 13.2 2.0 9.4 6.1 0.1 2.8 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Zn-ribbon_8 PF09723.10 gi|21228683|ref|NP_634605.1| - 0.086 13.0 8.2 2.7 8.2 0.1 3.9 4 0 0 4 4 4 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|21228683|ref|NP_634605.1| - 0.19 11.2 15.6 0.3 10.6 0.1 4.0 4 0 0 4 4 4 0 zinc-ribbon domain UPF0547 PF10571.9 gi|21228683|ref|NP_634605.1| - 0.2 11.8 0.4 0.2 11.8 0.4 3.5 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 GFA PF04828.14 gi|21228683|ref|NP_634605.1| - 0.27 11.6 7.1 1.8 9.0 0.1 3.7 3 1 1 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme RNA_POL_M_15KD PF02150.16 gi|21228683|ref|NP_634605.1| - 0.29 11.1 0.2 0.29 11.1 0.2 2.9 4 0 0 4 4 3 0 RNA polymerases M/15 Kd subunit zf_UBZ PF18439.1 gi|21228683|ref|NP_634605.1| - 0.29 10.7 5.6 2.6 7.7 0.1 3.1 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-NADH-PPase PF09297.11 gi|21228683|ref|NP_634605.1| - 2 8.2 0.0 2 8.2 0.0 3.9 4 0 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain DUF1610 PF07754.11 gi|21228683|ref|NP_634605.1| - 6.4 6.8 9.6 6.4 6.8 2.4 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) TF_Zn_Ribbon PF08271.12 gi|21228683|ref|NP_634605.1| - 8 6.1 10.0 1.1 8.9 0.2 3.1 2 1 1 3 3 3 0 TFIIB zinc-binding NUDIX PF00293.28 gi|21228684|ref|NP_634606.1| - 5.3e-12 45.9 0.0 6.9e-12 45.5 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain MttA_Hcf106 PF02416.16 gi|21228685|ref|NP_634607.1| - 2.8e-17 61.8 2.1 4.1e-17 61.2 2.1 1.5 1 1 0 1 1 1 1 mttA/Hcf106 family MttA_Hcf106 PF02416.16 gi|21228686|ref|NP_634608.1| - 9.4e-14 50.5 5.6 2.3e-13 49.2 5.6 1.8 1 1 0 1 1 1 1 mttA/Hcf106 family RNA_pol_Rpc4 PF05132.14 gi|21228686|ref|NP_634608.1| - 0.026 14.9 2.6 0.03 14.7 2.6 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF4834 PF16118.5 gi|21228686|ref|NP_634608.1| - 0.044 14.7 0.0 0.064 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) IFT43 PF15305.6 gi|21228686|ref|NP_634608.1| - 0.17 12.0 3.6 0.25 11.5 3.6 1.2 1 0 0 1 1 1 0 Intraflagellar transport protein 43 NARP1 PF12569.8 gi|21228686|ref|NP_634608.1| - 3 6.7 8.8 3.4 6.5 8.8 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 DUF1682 PF07946.14 gi|21228686|ref|NP_634608.1| - 8.3 5.5 10.6 9.2 5.4 10.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1682) TatC PF00902.18 gi|21228687|ref|NP_634609.1| - 2.3e-47 161.5 24.2 2.8e-47 161.2 24.2 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) TatC PF00902.18 gi|21228688|ref|NP_634610.1| - 3.2e-42 144.7 26.8 4.3e-42 144.3 26.8 1.2 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) NosD PF05048.13 gi|21228689|ref|NP_634611.1| - 8.4e-46 156.2 27.7 8.4e-46 156.2 27.7 3.8 3 2 1 4 4 4 1 Periplasmic copper-binding protein (NosD) Lactonase PF10282.9 gi|21228689|ref|NP_634611.1| - 3.9e-16 59.3 4.9 9.7e-05 21.8 0.1 3.3 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|21228689|ref|NP_634611.1| - 1.4e-09 37.9 8.9 0.0015 18.1 0.6 4.4 1 1 4 5 5 5 3 SMP-30/Gluconolactonase/LRE-like region PKD PF00801.20 gi|21228689|ref|NP_634611.1| - 2.9e-08 33.4 1.5 1.4e-07 31.2 1.5 2.3 1 0 0 1 1 1 1 PKD domain Cytochrom_D1 PF02239.16 gi|21228689|ref|NP_634611.1| - 7.1e-08 31.4 4.6 0.0039 15.8 0.8 3.0 1 1 2 3 3 3 3 Cytochrome D1 heme domain Beta_helix PF13229.6 gi|21228689|ref|NP_634611.1| - 8.1e-08 32.3 34.9 8.1e-08 32.3 34.9 4.8 3 2 1 4 4 4 2 Right handed beta helix region Arylesterase PF01731.20 gi|21228689|ref|NP_634611.1| - 4.5e-07 30.0 4.0 0.35 11.1 0.0 6.2 3 1 3 6 6 6 1 Arylesterase NHL PF01436.21 gi|21228689|ref|NP_634611.1| - 2.3e-06 27.4 16.8 1.3 9.2 0.0 6.8 7 1 1 8 8 6 3 NHL repeat PD40 PF07676.12 gi|21228689|ref|NP_634611.1| - 0.00021 21.2 0.0 24 5.0 0.0 5.4 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat Phytase-like PF13449.6 gi|21228689|ref|NP_634611.1| - 0.0012 18.8 0.0 1.7 8.5 0.0 2.8 1 1 2 3 3 3 2 Esterase-like activity of phytase PQQ PF01011.21 gi|21228689|ref|NP_634611.1| - 0.015 15.2 9.7 7.2 6.7 0.2 4.8 5 0 0 5 5 4 0 PQQ enzyme repeat DUF4213 PF13938.6 gi|21228689|ref|NP_634611.1| - 0.048 13.9 1.6 0.34 11.2 0.5 2.9 2 1 0 2 2 2 0 Putative heavy-metal chelation VCBS PF13517.6 gi|21228689|ref|NP_634611.1| - 1.5 9.5 11.5 0.49 11.0 0.5 4.6 3 1 0 3 3 3 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella HIRA_B PF09453.10 gi|21228689|ref|NP_634611.1| - 3.9 7.4 10.1 90 3.1 0.1 5.1 5 0 0 5 5 5 0 HIRA B motif PQQ_3 PF13570.6 gi|21228689|ref|NP_634611.1| - 9.2 6.9 21.2 16 6.2 1.5 5.8 5 0 0 5 5 5 0 PQQ-like domain DDE_Tnp_IS66 PF03050.14 gi|21228690|ref|NP_634612.1| - 2.5e-73 247.0 0.0 2.9e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21228690|ref|NP_634612.1| - 4.8e-10 39.7 6.7 1.3e-09 38.2 6.7 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21228690|ref|NP_634612.1| - 0.00015 22.0 1.1 0.62 10.3 0.0 3.0 2 1 1 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|21228690|ref|NP_634612.1| - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) zf-RING_5 PF14634.6 gi|21228690|ref|NP_634612.1| - 0.34 10.9 7.9 1 9.4 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21228690|ref|NP_634612.1| - 1.2 10.0 7.5 0.17 12.6 2.9 2.0 2 0 0 2 2 2 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|21228690|ref|NP_634612.1| - 1.3 9.7 5.2 31 5.3 0.5 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DASH_Spc19 PF08287.11 gi|21228691|ref|NP_634613.1| - 0.025 14.5 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Spc19 SlyX PF04102.12 gi|21228691|ref|NP_634613.1| - 0.036 14.7 0.1 0.054 14.1 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.11 gi|21228691|ref|NP_634613.1| - 0.22 11.3 0.4 0.22 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) EamA PF00892.20 gi|21228693|ref|NP_634615.1| - 1.7e-21 76.8 14.7 1.9e-21 76.7 14.7 1.0 1 0 0 1 1 1 1 EamA-like transporter family EcsB PF05975.12 gi|21228693|ref|NP_634615.1| - 0.0038 16.1 3.0 0.0044 15.9 3.0 1.1 1 0 0 1 1 1 1 Bacterial ABC transporter protein EcsB TMEM234 PF10639.9 gi|21228693|ref|NP_634615.1| - 0.013 15.5 3.8 0.023 14.7 3.7 1.6 1 1 0 1 1 1 0 Putative transmembrane family 234 TPT PF03151.16 gi|21228693|ref|NP_634615.1| - 0.032 13.6 4.2 0.057 12.7 4.2 1.4 1 1 0 1 1 1 0 Triose-phosphate Transporter family DUF2070 PF09843.9 gi|21228693|ref|NP_634615.1| - 0.043 12.1 13.0 0.052 11.8 13.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DAD PF02109.16 gi|21228693|ref|NP_634615.1| - 0.13 12.6 3.3 0.12 12.7 2.2 1.7 1 1 0 1 1 1 0 DAD family Ceramidase PF05875.12 gi|21228693|ref|NP_634615.1| - 0.32 10.4 4.6 0.31 10.4 4.0 1.3 1 1 0 1 1 1 0 Ceramidase DUF4011 PF13195.6 gi|21228694|ref|NP_634616.1| - 1.6e-41 142.0 1.3 3.1e-41 141.0 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF4011) MTES_1575 PF18741.1 gi|21228694|ref|NP_634616.1| - 5.5e-34 116.2 0.0 1.2e-33 115.1 0.0 1.6 1 0 0 1 1 1 1 REase_MTES_1575 AAA_12 PF13087.6 gi|21228694|ref|NP_634616.1| - 3.1e-13 49.8 0.0 6.4e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|21228694|ref|NP_634616.1| - 1e-12 48.4 0.1 2.9e-06 27.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain DUF3320 PF11784.8 gi|21228694|ref|NP_634616.1| - 3e-10 39.9 0.1 8.4e-10 38.5 0.1 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF3320) AAA_30 PF13604.6 gi|21228694|ref|NP_634616.1| - 5e-07 29.6 0.4 0.00027 20.7 0.2 2.4 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.6 gi|21228694|ref|NP_634616.1| - 1.7e-05 25.2 0.0 0.0043 17.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain DUF2075 PF09848.9 gi|21228694|ref|NP_634616.1| - 1.9e-05 24.1 0.0 0.046 13.0 0.0 3.4 3 0 0 3 3 3 1 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 gi|21228694|ref|NP_634616.1| - 0.0032 17.9 0.1 0.0095 16.3 0.1 1.8 1 0 0 1 1 1 1 AAA ATPase domain Helicase_RecD PF05127.14 gi|21228694|ref|NP_634616.1| - 0.0048 16.8 0.0 0.055 13.3 0.0 2.6 3 0 0 3 3 3 1 Helicase UvrD-helicase PF00580.21 gi|21228694|ref|NP_634616.1| - 0.0058 16.2 0.0 0.015 14.8 0.0 1.7 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain DUF559 PF04480.12 gi|21228694|ref|NP_634616.1| - 0.0079 16.0 0.0 0.021 14.7 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF559) Viral_helicase1 PF01443.18 gi|21228694|ref|NP_634616.1| - 0.0086 15.8 0.1 2.3 7.9 0.0 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase ResIII PF04851.15 gi|21228694|ref|NP_634616.1| - 0.011 15.7 0.0 0.41 10.6 0.0 2.7 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit IstB_IS21 PF01695.17 gi|21228694|ref|NP_634616.1| - 0.03 14.1 0.0 0.071 12.8 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_5 PF07728.14 gi|21228694|ref|NP_634616.1| - 0.088 12.8 0.0 0.25 11.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|21228694|ref|NP_634616.1| - 0.16 12.2 0.1 1 9.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain DUF349 PF03993.12 gi|21228694|ref|NP_634616.1| - 0.16 12.2 1.6 16 5.9 0.0 3.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF349) EamA PF00892.20 gi|21228695|ref|NP_634617.1| - 1.3e-37 129.0 33.9 5.3e-20 72.0 11.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|21228695|ref|NP_634617.1| - 8.7e-06 25.3 11.9 7.5e-05 22.2 11.9 2.1 1 1 0 1 1 1 1 Triose-phosphate Transporter family PUNUT PF16913.5 gi|21228695|ref|NP_634617.1| - 0.00029 20.2 4.4 0.00029 20.2 4.4 2.4 1 1 1 2 2 2 1 Purine nucleobase transmembrane transport CRT-like PF08627.10 gi|21228695|ref|NP_634617.1| - 0.0047 15.9 4.9 0.0047 15.9 4.9 1.9 1 1 0 2 2 2 1 CRT-like, chloroquine-resistance transporter-like TMEM234 PF10639.9 gi|21228695|ref|NP_634617.1| - 0.025 14.6 9.4 0.14 12.2 0.4 2.7 2 1 1 3 3 3 0 Putative transmembrane family 234 SLC35F PF06027.12 gi|21228695|ref|NP_634617.1| - 0.08 12.4 8.8 0.35 10.3 5.0 2.2 2 0 0 2 2 2 0 Solute carrier family 35 SKG6 PF08693.10 gi|21228695|ref|NP_634617.1| - 0.086 12.3 0.8 1.7 8.2 0.1 2.7 2 0 0 2 2 2 0 Transmembrane alpha-helix domain TPR_2 PF07719.17 gi|21228696|ref|NP_634618.1| - 1.1e-46 153.2 14.1 3.4e-05 23.6 0.0 9.4 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21228696|ref|NP_634618.1| - 1e-45 150.2 9.8 2.6e-05 24.1 0.0 10.0 10 0 0 10 10 10 9 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21228696|ref|NP_634618.1| - 1.5e-44 147.2 4.3 0.00039 20.6 0.0 9.0 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21228696|ref|NP_634618.1| - 5.6e-38 127.2 13.4 1.4e-05 24.7 0.0 9.0 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21228696|ref|NP_634618.1| - 7.2e-34 115.2 5.7 1.3e-05 24.8 0.0 8.6 3 1 6 9 9 9 7 TPR repeat TPR_16 PF13432.6 gi|21228696|ref|NP_634618.1| - 7e-32 109.8 0.4 1.9e-07 31.6 0.0 5.5 4 1 1 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21228696|ref|NP_634618.1| - 8.9e-32 109.2 17.9 1.7e-07 31.5 1.0 7.4 3 2 4 7 7 7 6 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21228696|ref|NP_634618.1| - 5.3e-27 94.1 3.1 6.2e-05 23.4 0.1 5.8 3 1 3 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21228696|ref|NP_634618.1| - 1.8e-26 90.6 8.1 0.0014 19.3 0.0 9.4 3 1 7 10 10 9 6 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21228696|ref|NP_634618.1| - 5.2e-24 82.5 8.5 0.00065 19.5 0.0 9.2 10 0 0 10 10 9 5 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21228696|ref|NP_634618.1| - 2.5e-17 62.8 0.9 0.00098 19.2 0.0 6.3 2 2 6 8 8 8 4 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21228696|ref|NP_634618.1| - 8.8e-17 60.4 24.6 0.0076 16.1 0.1 9.0 9 0 0 9 9 9 7 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21228696|ref|NP_634618.1| - 7.6e-12 45.3 7.4 0.036 14.3 0.0 4.9 1 1 5 7 7 7 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_4 PF07721.14 gi|21228696|ref|NP_634618.1| - 4.8e-11 42.2 0.0 1.9 9.3 0.0 7.1 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_15 PF13429.6 gi|21228696|ref|NP_634618.1| - 1e-10 41.3 0.4 0.00085 18.6 0.0 3.8 1 1 2 4 4 4 3 Tetratricopeptide repeat TPR_20 PF14561.6 gi|21228696|ref|NP_634618.1| - 5.7e-10 39.4 0.9 0.069 13.5 0.0 5.7 3 1 2 5 5 5 2 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|21228696|ref|NP_634618.1| - 4.6e-07 29.5 0.2 0.07 12.5 0.0 4.6 3 2 2 5 5 5 1 Coatomer epsilon subunit TPR_6 PF13174.6 gi|21228696|ref|NP_634618.1| - 6.9e-07 29.5 7.2 0.83 10.4 0.0 7.4 8 0 0 8 8 7 1 Tetratricopeptide repeat BTAD PF03704.17 gi|21228696|ref|NP_634618.1| - 1.9e-06 28.4 8.7 0.33 11.4 0.3 4.1 1 1 1 4 4 4 3 Bacterial transcriptional activator domain NARP1 PF12569.8 gi|21228696|ref|NP_634618.1| - 1.4e-05 24.2 6.0 1.5 7.7 0.3 5.4 1 1 3 5 5 5 1 NMDA receptor-regulated protein 1 TPR_MalT PF17874.1 gi|21228696|ref|NP_634618.1| - 1.9e-05 24.2 0.1 0.38 10.1 0.0 3.6 1 1 3 4 4 4 2 MalT-like TPR region DUF3856 PF12968.7 gi|21228696|ref|NP_634618.1| - 0.00099 19.2 2.7 52 3.9 0.0 6.5 4 2 4 8 8 7 0 Domain of Unknown Function (DUF3856) DUF4192 PF13830.6 gi|21228696|ref|NP_634618.1| - 0.0037 17.4 0.0 0.028 14.5 0.0 2.2 2 1 1 3 3 3 1 Domain of unknown function (DUF4192) Sec16_C PF12931.7 gi|21228696|ref|NP_634618.1| - 0.0089 15.7 0.2 0.2 11.3 0.0 3.0 2 1 1 3 3 3 1 Sec23-binding domain of Sec16 HrpB1_HrpK PF09613.10 gi|21228696|ref|NP_634618.1| - 0.049 13.3 0.0 12 5.5 0.0 2.6 2 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) SLT_L PF14718.6 gi|21228696|ref|NP_634618.1| - 0.1 12.8 1.9 48 4.2 0.0 4.6 5 1 1 6 6 6 0 Soluble lytic murein transglycosylase L domain Lambda_Kil PF06301.11 gi|21228696|ref|NP_634618.1| - 0.11 12.1 0.5 52 3.6 0.0 4.3 5 0 0 5 5 5 0 Bacteriophage lambda Kil protein Fis1_TPR_C PF14853.6 gi|21228696|ref|NP_634618.1| - 0.5 10.5 2.5 13 6.0 0.0 4.0 4 1 1 5 5 4 0 Fis1 C-terminal tetratricopeptide repeat PvlArgDC PF01862.16 gi|21228697|ref|NP_634619.1| - 3.9e-61 205.6 0.0 4.4e-61 205.4 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Hydant_A_N PF05378.13 gi|21228698|ref|NP_634620.1| - 8.1e-31 107.1 0.8 9e-27 93.9 0.1 3.3 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|21228698|ref|NP_634620.1| - 2.2e-30 105.9 1.7 2.3e-29 102.6 0.2 2.9 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|21228698|ref|NP_634620.1| - 3e-06 26.1 0.8 0.004 15.8 0.2 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|21228698|ref|NP_634620.1| - 0.02 14.4 0.0 0.66 9.4 0.0 2.4 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family Gemin6 PF06372.12 gi|21228699|ref|NP_634621.1| - 0.15 11.6 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Gemin6 protein Hydant_A_N PF05378.13 gi|21228700|ref|NP_634622.1| - 6.1e-32 110.7 2.7 2.5e-28 99.0 0.7 3.1 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|21228700|ref|NP_634622.1| - 3.7e-31 108.5 0.8 4.9e-30 104.8 0.1 2.3 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|21228700|ref|NP_634622.1| - 2.4e-06 26.4 0.7 0.0059 15.3 0.1 2.2 2 0 0 2 2 2 2 MutL protein ROK PF00480.20 gi|21228700|ref|NP_634622.1| - 0.038 13.5 0.0 0.071 12.6 0.0 1.4 1 0 0 1 1 1 0 ROK family BcrAD_BadFG PF01869.20 gi|21228700|ref|NP_634622.1| - 0.14 11.6 0.1 3.9 6.9 0.0 2.2 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.6 gi|21228700|ref|NP_634622.1| - 0.24 11.9 0.8 3.4 8.1 0.1 2.7 2 1 1 3 3 3 0 Cell division protein FtsA Wax2_C PF12076.8 gi|21228701|ref|NP_634623.1| - 0.028 14.1 0.0 0.029 14.1 0.0 1.1 1 0 0 1 1 1 0 WAX2 C-terminal domain ParE_toxin PF05016.15 gi|21228702|ref|NP_634624.1| - 3.6e-07 30.7 0.1 3.9e-07 30.6 0.1 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE DUF45 PF01863.17 gi|21228703|ref|NP_634625.1| - 5.5e-59 199.7 0.3 6.5e-59 199.5 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.10 gi|21228703|ref|NP_634625.1| - 0.0014 18.7 0.0 0.0023 18.1 0.0 1.3 1 0 0 1 1 1 1 WLM domain DUF3797 PF12677.7 gi|21228704|ref|NP_634626.1| - 0.01 15.7 3.4 0.4 10.6 0.1 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF3797) DUF2207 PF09972.9 gi|21228704|ref|NP_634626.1| - 0.02 13.7 1.3 0.024 13.4 1.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MqsA_antitoxin PF15731.5 gi|21228704|ref|NP_634626.1| - 0.04 14.0 6.0 2.2 8.4 0.1 3.0 2 1 0 2 2 2 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA SLATT_5 PF18160.1 gi|21228704|ref|NP_634626.1| - 0.069 12.5 4.8 0.12 11.7 4.8 1.3 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 DZR PF12773.7 gi|21228704|ref|NP_634626.1| - 0.1 12.7 9.6 41 4.3 9.6 3.0 1 1 0 1 1 1 0 Double zinc ribbon DUF4220 PF13968.6 gi|21228704|ref|NP_634626.1| - 0.11 11.9 0.1 0.15 11.5 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4220) zf-BED PF02892.15 gi|21228704|ref|NP_634626.1| - 0.61 10.2 11.2 2.8 8.0 0.1 3.9 4 0 0 4 4 4 0 BED zinc finger zf-ribbon_3 PF13248.6 gi|21228704|ref|NP_634626.1| - 0.66 9.5 12.3 0.55 9.7 0.3 4.0 4 0 0 4 4 4 0 zinc-ribbon domain C1_1 PF00130.22 gi|21228704|ref|NP_634626.1| - 0.76 9.7 12.5 0.052 13.4 1.6 3.1 3 1 0 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Desulfoferrod_N PF06397.12 gi|21228704|ref|NP_634626.1| - 1.1 9.0 14.6 1.2 8.8 0.5 4.2 5 0 0 5 5 5 0 Desulfoferrodoxin, N-terminal domain DUF3268 PF11672.8 gi|21228704|ref|NP_634626.1| - 4.9 7.5 8.0 1.3 9.4 0.2 2.9 2 1 2 4 4 4 0 zinc-finger-containing domain A2L_zn_ribbon PF08792.10 gi|21228704|ref|NP_634626.1| - 6 6.7 18.2 0.67 9.7 0.4 4.8 4 1 0 4 4 4 0 A2L zinc ribbon domain zinc-ribbon_6 PF10005.9 gi|21228704|ref|NP_634626.1| - 6.2 7.6 7.9 11 6.8 4.7 2.7 2 1 0 2 2 2 0 zinc-ribbon domain DZR PF12773.7 gi|21228705|ref|NP_634627.1| - 0.0027 17.7 6.3 0.023 14.7 1.6 2.8 1 1 1 2 2 2 1 Double zinc ribbon HypA PF01155.19 gi|21228705|ref|NP_634627.1| - 0.0034 17.4 6.7 0.31 11.1 0.3 2.2 1 1 1 2 2 2 2 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|21228705|ref|NP_634627.1| - 0.0051 16.9 10.4 0.85 9.8 0.1 3.6 3 1 0 3 3 3 1 Zinc ribbon domain zf-C2H2_3rep PF18868.1 gi|21228705|ref|NP_634627.1| - 0.022 15.5 0.8 0.022 15.5 0.8 1.9 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_4 PF13894.6 gi|21228705|ref|NP_634627.1| - 0.024 15.5 11.4 15 6.8 0.2 4.5 4 0 0 4 4 4 0 C2H2-type zinc finger zf-AN1 PF01428.16 gi|21228705|ref|NP_634627.1| - 0.027 14.6 14.6 4.8 7.4 0.1 4.2 4 0 0 4 4 4 0 AN1-like Zinc finger FYVE PF01363.21 gi|21228705|ref|NP_634627.1| - 0.071 13.2 10.2 0.15 12.2 1.3 3.0 1 1 1 2 2 2 0 FYVE zinc finger zf-C2HC_2 PF13913.6 gi|21228705|ref|NP_634627.1| - 0.11 12.4 1.0 0.11 12.4 1.0 3.6 4 0 0 4 4 3 0 zinc-finger of a C2HC-type Chordopox_RPO7 PF05864.12 gi|21228705|ref|NP_634627.1| - 0.13 12.5 1.3 5.1 7.4 0.3 2.4 2 0 0 2 2 2 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) A2L_zn_ribbon PF08792.10 gi|21228705|ref|NP_634627.1| - 0.15 11.8 11.9 4.5 7.1 0.9 4.2 4 0 0 4 4 4 0 A2L zinc ribbon domain YhfH PF14149.6 gi|21228705|ref|NP_634627.1| - 0.23 11.5 10.3 2.9 8.0 0.0 3.6 4 0 0 4 4 3 0 YhfH-like protein Rubredoxin_2 PF18073.1 gi|21228705|ref|NP_634627.1| - 0.49 10.2 13.7 1.7 8.4 0.4 3.7 4 0 0 4 4 4 0 Rubredoxin metal binding domain TF_Zn_Ribbon PF08271.12 gi|21228705|ref|NP_634627.1| - 0.92 9.1 12.0 4 7.0 0.1 4.0 3 1 0 3 3 3 0 TFIIB zinc-binding PHD_4 PF16866.5 gi|21228705|ref|NP_634627.1| - 1.1 9.4 6.2 0.65 10.1 2.1 2.4 1 1 1 2 2 2 0 PHD-finger DUF983 PF06170.12 gi|21228705|ref|NP_634627.1| - 2.1 8.8 6.5 19 5.7 0.1 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF983) zf-C2H2 PF00096.26 gi|21228705|ref|NP_634627.1| - 2.8 8.6 19.4 3 8.5 0.5 4.6 4 0 0 4 4 4 0 Zinc finger, C2H2 type VATC PF18716.1 gi|21228705|ref|NP_634627.1| - 3.7 7.5 15.8 3 7.8 0.9 3.9 4 0 0 4 4 4 0 Vms1-associating treble clef domain Jiv90 PF14901.6 gi|21228705|ref|NP_634627.1| - 4.1 7.6 12.6 29 4.9 7.2 3.2 2 1 1 3 3 3 0 Cleavage inducing molecular chaperone zf-C2H2_11 PF16622.5 gi|21228705|ref|NP_634627.1| - 9.4 6.1 11.6 5 7.0 0.1 3.7 4 0 0 4 4 4 0 zinc-finger C2H2-type VAPB_antitox PF02697.14 gi|21228706|ref|NP_634628.1| - 0.02 15.7 0.8 0.03 15.1 0.8 1.4 1 1 0 1 1 1 0 Putative antitoxin DUF4158 PF13700.6 gi|21228706|ref|NP_634628.1| - 0.088 12.6 0.0 0.1 12.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) Lambda_tail_I PF06805.12 gi|21228706|ref|NP_634628.1| - 0.11 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage lambda tail assembly protein I ParE_toxin PF05016.15 gi|21228707|ref|NP_634629.1| - 1.9e-09 38.0 0.1 2.2e-09 37.8 0.1 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE SPOR PF05036.13 gi|21228707|ref|NP_634629.1| - 0.17 12.3 0.0 0.31 11.5 0.0 1.5 1 1 0 1 1 1 0 Sporulation related domain Fic PF02661.18 gi|21228708|ref|NP_634630.1| - 1.1e-22 80.8 0.0 2.8e-22 79.4 0.0 1.7 1 0 0 1 1 1 1 Fic/DOC family HTH_DeoR PF08220.12 gi|21228708|ref|NP_634630.1| - 0.00015 21.5 0.1 0.0004 20.1 0.1 1.8 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_24 PF13412.6 gi|21228708|ref|NP_634630.1| - 0.00041 19.9 0.0 0.0011 18.5 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fic_N PF13784.6 gi|21228708|ref|NP_634630.1| - 0.00096 19.1 1.9 0.019 15.0 0.2 3.0 3 0 0 3 3 3 1 Fic/DOC family N-terminal Phage_rep_O PF04492.13 gi|21228708|ref|NP_634630.1| - 0.0012 19.4 0.1 0.0031 18.1 0.1 1.8 1 1 0 1 1 1 1 Bacteriophage replication protein O Smr PF01713.21 gi|21228708|ref|NP_634630.1| - 0.019 15.3 0.0 0.049 14.0 0.0 1.7 1 0 0 1 1 1 0 Smr domain TrmB PF01978.19 gi|21228708|ref|NP_634630.1| - 0.12 12.3 1.2 0.3 11.0 0.0 2.3 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB Phage_XkdX PF09693.10 gi|21228708|ref|NP_634630.1| - 0.3 11.1 2.1 7.4 6.7 0.0 3.2 3 0 0 3 3 3 0 Phage uncharacterised protein (Phage_XkdX) DUF86 PF01934.17 gi|21228709|ref|NP_634631.1| - 3.5e-26 91.4 0.0 4e-26 91.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Polbeta PF18765.1 gi|21228710|ref|NP_634632.1| - 9.4e-16 57.7 0.4 1.2e-15 57.3 0.4 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|21228710|ref|NP_634632.1| - 3.8e-14 52.7 0.9 4.8e-14 52.4 0.9 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.6 gi|21228710|ref|NP_634632.1| - 0.0075 16.5 0.0 0.0083 16.3 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm PAC2 PF09754.9 gi|21228710|ref|NP_634632.1| - 0.058 13.4 0.0 0.063 13.3 0.0 1.1 1 0 0 1 1 1 0 PAC2 family DUF1330 PF07045.11 gi|21228710|ref|NP_634632.1| - 0.072 13.4 0.0 0.095 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1330) NTP_transf_2 PF01909.23 gi|21228711|ref|NP_634633.1| - 8.6e-15 54.8 0.1 1e-14 54.6 0.1 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|21228711|ref|NP_634633.1| - 4.1e-13 49.2 0.1 4.6e-13 49.1 0.1 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|21228711|ref|NP_634633.1| - 0.053 13.7 0.0 0.056 13.6 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase beta palm DUF294 PF03445.13 gi|21228711|ref|NP_634633.1| - 0.2 11.4 0.0 0.23 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 ResIII PF04851.15 gi|21228712|ref|NP_634634.1| - 1.8e-44 151.7 0.4 2.3e-44 151.4 0.4 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 gi|21228712|ref|NP_634634.1| - 6.3e-18 65.3 0.2 8.7e-18 64.8 0.2 1.1 1 0 0 1 1 1 1 SWI2/SNF2 ATPase DEAD PF00270.29 gi|21228712|ref|NP_634634.1| - 8.2e-09 35.5 0.0 1.2e-08 35.0 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.23 gi|21228712|ref|NP_634634.1| - 0.0014 17.4 0.0 0.0085 14.9 0.0 1.8 1 1 0 2 2 2 1 SNF2 family N-terminal domain DUF2075 PF09848.9 gi|21228712|ref|NP_634634.1| - 0.0016 17.8 0.0 0.0023 17.2 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_34 PF13872.6 gi|21228712|ref|NP_634634.1| - 0.0096 14.8 0.3 0.021 13.7 0.3 1.5 1 1 0 1 1 1 1 P-loop containing NTP hydrolase pore-1 AAA_11 PF13086.6 gi|21228712|ref|NP_634634.1| - 0.018 14.9 0.1 0.53 10.0 0.0 2.1 1 1 0 2 2 2 0 AAA domain PhoH PF02562.16 gi|21228712|ref|NP_634634.1| - 0.12 11.9 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein Pyr_redox_2 PF07992.14 gi|21228713|ref|NP_634635.1| - 4.9e-17 62.1 0.5 1.2e-06 28.0 0.0 3.2 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|21228713|ref|NP_634635.1| - 3.2e-13 49.6 1.9 0.00011 21.4 0.4 3.2 3 0 0 3 3 3 3 FAD binding domain GIDA PF01134.22 gi|21228713|ref|NP_634635.1| - 2.8e-12 46.4 0.2 0.00083 18.5 0.0 3.2 3 0 0 3 3 3 3 Glucose inhibited division protein A DAO PF01266.24 gi|21228713|ref|NP_634635.1| - 1.1e-08 35.1 0.2 1.5e-05 24.8 0.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|21228713|ref|NP_634635.1| - 5.3e-08 32.0 1.6 2.3e-06 26.6 0.2 2.5 3 0 0 3 3 3 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|21228713|ref|NP_634635.1| - 1.7e-05 25.0 0.2 6.5e-05 23.1 0.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|21228713|ref|NP_634635.1| - 0.00018 20.9 0.2 0.00056 19.2 0.1 1.8 2 0 0 2 2 2 1 Thi4 family Lycopene_cycl PF05834.12 gi|21228713|ref|NP_634635.1| - 0.00018 20.7 0.2 0.0069 15.5 0.2 2.2 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 gi|21228713|ref|NP_634635.1| - 0.0011 18.3 0.2 0.0041 16.4 0.3 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|21228713|ref|NP_634635.1| - 0.0012 18.2 0.1 0.0035 16.6 0.0 1.7 2 0 0 2 2 2 1 FAD binding domain NAD_binding_9 PF13454.6 gi|21228713|ref|NP_634635.1| - 0.03 14.3 0.0 1.1 9.2 0.0 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding FAD_oxidored PF12831.7 gi|21228713|ref|NP_634635.1| - 0.03 13.7 1.1 0.44 9.8 0.7 2.2 2 0 0 2 2 2 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|21228713|ref|NP_634635.1| - 0.07 13.7 0.1 1.6 9.3 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DEAD PF00270.29 gi|21228714|ref|NP_634636.1| - 7.9e-25 87.6 0.0 1.4e-24 86.8 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF1998 PF09369.10 gi|21228714|ref|NP_634636.1| - 2e-22 79.7 0.0 3.4e-21 75.8 0.0 2.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1998) Helicase_C PF00271.31 gi|21228714|ref|NP_634636.1| - 5.6e-14 52.4 0.0 5.8e-13 49.1 0.0 2.5 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|21228714|ref|NP_634636.1| - 1.1e-05 25.6 0.0 2.2e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit MC1 PF05854.11 gi|21228714|ref|NP_634636.1| - 0.013 15.7 0.5 0.029 14.7 0.5 1.6 1 0 0 1 1 1 0 Non-histone chromosomal protein MC1 UPF0239 PF06783.11 gi|21228714|ref|NP_634636.1| - 0.53 10.5 0.0 0.53 10.5 0.0 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0239) LemA PF04011.12 gi|21228715|ref|NP_634637.1| - 4.3e-64 214.9 1.7 5.2e-64 214.6 1.7 1.1 1 0 0 1 1 1 1 LemA family DUF2207 PF09972.9 gi|21228716|ref|NP_634638.1| - 1.5e-110 370.3 0.9 1.5e-110 370.3 0.9 1.4 2 0 0 2 2 2 1 Predicted membrane protein (DUF2207) NMN_transporter PF04973.12 gi|21228716|ref|NP_634638.1| - 0.0042 17.1 2.5 0.016 15.2 1.3 2.2 2 0 0 2 2 2 1 Nicotinamide mononucleotide transporter DUF423 PF04241.15 gi|21228716|ref|NP_634638.1| - 0.013 15.7 0.2 0.028 14.6 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF423) CRPA PF05745.11 gi|21228716|ref|NP_634638.1| - 0.039 14.0 0.1 0.087 12.8 0.1 1.5 1 0 0 1 1 1 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) RDD PF06271.12 gi|21228716|ref|NP_634638.1| - 1.6 9.0 6.8 0.82 9.9 3.7 2.0 2 0 0 2 2 2 0 RDD family DUF2207 PF09972.9 gi|21228717|ref|NP_634639.1| - 4.3e-82 276.4 4.0 6.8e-82 275.8 4.0 1.3 1 1 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF4834 PF16118.5 gi|21228717|ref|NP_634639.1| - 0.035 15.0 0.0 0.12 13.3 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Zip PF02535.22 gi|21228717|ref|NP_634639.1| - 0.077 12.2 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Ribosomal_L15e PF00827.17 gi|21228718|ref|NP_634640.1| - 6.8e-82 273.8 6.7 7.6e-82 273.7 6.7 1.0 1 0 0 1 1 1 1 Ribosomal L15 FXMRP1_C_core PF12235.8 gi|21228718|ref|NP_634640.1| - 0.038 14.6 8.9 0.077 13.6 1.2 2.1 2 0 0 2 2 2 0 Fragile X-related 1 protein core C terminal RNA_binding PF01877.17 gi|21228719|ref|NP_634641.1| - 2.7e-36 124.4 0.4 3.2e-36 124.2 0.4 1.0 1 0 0 1 1 1 1 RNA binding DUF5063 PF16702.5 gi|21228719|ref|NP_634641.1| - 0.07 13.5 0.0 0.093 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5063) RNase_P_p30 PF01876.16 gi|21228720|ref|NP_634642.1| - 3.1e-44 151.0 0.0 3.6e-44 150.8 0.0 1.0 1 0 0 1 1 1 1 RNase P subunit p30 NAD_binding_11 PF14833.6 gi|21228720|ref|NP_634642.1| - 0.19 12.0 0.2 18 5.6 0.0 2.3 1 1 1 2 2 2 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RNase_P_Rpp14 PF01900.19 gi|21228721|ref|NP_634643.1| - 2.1e-18 66.4 0.0 2.4e-18 66.2 0.0 1.0 1 0 0 1 1 1 1 Rpp14/Pop5 family TMEM191C PF15194.6 gi|21228721|ref|NP_634643.1| - 0.079 13.2 0.0 0.11 12.6 0.0 1.3 1 1 0 1 1 1 0 TMEM191C family BMC PF00936.19 gi|21228721|ref|NP_634643.1| - 0.14 12.2 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 BMC domain Proteasome PF00227.26 gi|21228722|ref|NP_634644.1| - 5.7e-62 208.6 1.1 7.5e-62 208.2 1.1 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|21228722|ref|NP_634644.1| - 1.2e-14 53.7 0.5 4.1e-14 51.9 0.1 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature SBDS PF01172.18 gi|21228723|ref|NP_634645.1| - 2.3e-23 82.1 0.0 4.2e-23 81.2 0.0 1.5 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|21228723|ref|NP_634645.1| - 1.7e-18 66.7 0.1 2.3e-18 66.3 0.1 1.2 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 gi|21228723|ref|NP_634645.1| - 0.016 15.2 0.0 0.031 14.3 0.0 1.4 1 0 0 1 1 1 0 Elongation factor G C-terminus KH_6 PF15985.5 gi|21228724|ref|NP_634646.1| - 2.1e-10 40.8 0.1 4e-10 39.9 0.1 1.5 1 0 0 1 1 1 1 KH domain ECR1_N PF14382.6 gi|21228724|ref|NP_634646.1| - 8.9e-08 31.8 0.0 2.2e-07 30.5 0.0 1.7 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region KH_1 PF00013.29 gi|21228724|ref|NP_634646.1| - 2.2e-06 27.4 0.4 4.7e-06 26.3 0.4 1.6 1 0 0 1 1 1 1 KH domain S1 PF00575.23 gi|21228724|ref|NP_634646.1| - 3.1e-06 27.4 0.1 3.1e-06 27.4 0.1 2.7 4 0 0 4 4 4 1 S1 RNA binding domain KH_2 PF07650.17 gi|21228724|ref|NP_634646.1| - 0.00026 20.8 0.2 0.001 18.8 0.1 2.1 1 1 0 1 1 1 1 KH domain ASFV_p27 PF06556.11 gi|21228724|ref|NP_634646.1| - 0.12 12.4 0.0 7.4 6.7 0.0 2.2 2 0 0 2 2 2 0 IAP-like protein p27 C-terminus RNase_PH PF01138.21 gi|21228725|ref|NP_634647.1| - 1.3e-33 116.3 0.0 1.3e-33 116.3 0.0 3.1 3 1 0 3 3 3 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|21228725|ref|NP_634647.1| - 7.9e-17 61.1 0.2 2.6e-16 59.4 0.2 2.0 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.21 gi|21228726|ref|NP_634648.1| - 3.2e-30 105.3 0.0 4.9e-30 104.7 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|21228726|ref|NP_634648.1| - 2e-13 50.1 0.4 4.4e-13 49.1 0.4 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.19 gi|21228727|ref|NP_634649.1| - 4.5e-29 100.4 1.3 5.5e-29 100.1 1.3 1.1 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|21228727|ref|NP_634649.1| - 0.00046 20.1 1.5 0.00068 19.6 1.5 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain C1_1 PF00130.22 gi|21228727|ref|NP_634649.1| - 0.0032 17.3 0.7 0.0049 16.7 0.7 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) HalOD2 PF18547.1 gi|21228727|ref|NP_634649.1| - 0.016 15.1 6.8 0.12 12.3 6.8 2.1 1 1 0 1 1 1 0 Halobacterial output domain 2 DUF4379 PF14311.6 gi|21228727|ref|NP_634649.1| - 0.038 14.4 0.8 0.084 13.2 0.1 1.8 2 0 0 2 2 2 0 Probable Zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21228727|ref|NP_634649.1| - 0.094 12.8 0.6 3.5 7.8 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain DUF951 PF06107.11 gi|21228727|ref|NP_634649.1| - 0.11 12.4 2.7 0.21 11.5 2.7 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF951) zinc_ribbon_4 PF13717.6 gi|21228727|ref|NP_634649.1| - 0.13 12.2 0.5 0.13 12.2 0.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|21228727|ref|NP_634649.1| - 0.15 12.0 2.7 5.3 7.1 0.2 2.4 2 0 0 2 2 2 0 Nudix N-terminal TFIIS_C PF01096.18 gi|21228727|ref|NP_634649.1| - 0.24 11.3 3.0 3 7.8 0.6 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) A2L_zn_ribbon PF08792.10 gi|21228727|ref|NP_634649.1| - 0.67 9.7 3.8 3.9 7.3 1.2 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|21228728|ref|NP_634650.1| - 2.8e-09 36.5 8.6 4.1e-09 36.0 8.6 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|21228728|ref|NP_634650.1| - 6.6e-05 22.4 2.2 0.16 11.6 0.6 2.1 1 1 1 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 gi|21228728|ref|NP_634650.1| - 0.00023 20.4 0.7 0.0079 15.6 0.1 2.1 2 0 0 2 2 2 1 zinc-ribbon domain HypA PF01155.19 gi|21228728|ref|NP_634650.1| - 0.0011 18.9 0.5 0.0011 18.9 0.5 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|21228728|ref|NP_634650.1| - 0.0014 18.1 1.0 0.0017 17.8 1.0 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|21228728|ref|NP_634650.1| - 0.0018 17.9 2.3 0.0031 17.2 2.3 1.4 1 1 0 1 1 1 1 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|21228728|ref|NP_634650.1| - 0.0022 17.9 2.5 0.0043 16.9 2.5 1.6 1 1 0 1 1 1 1 Putative transposase DNA-binding domain Cys_rich_CPXG PF14255.6 gi|21228728|ref|NP_634650.1| - 0.0074 16.2 2.1 0.048 13.6 0.2 2.1 2 0 0 2 2 2 1 Cysteine-rich CPXCG DZR PF12773.7 gi|21228728|ref|NP_634650.1| - 0.014 15.4 1.1 0.02 14.9 1.1 1.4 1 1 0 1 1 1 0 Double zinc ribbon DUF951 PF06107.11 gi|21228728|ref|NP_634650.1| - 0.016 15.1 3.1 0.1 12.5 0.1 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF951) zinc_ribbon_6 PF14599.6 gi|21228728|ref|NP_634650.1| - 0.027 14.5 1.7 0.037 14.0 1.7 1.2 1 0 0 1 1 1 0 Zinc-ribbon zinc-ribbons_6 PF07191.12 gi|21228728|ref|NP_634650.1| - 0.028 14.4 0.5 0.037 14.0 0.5 1.2 1 0 0 1 1 1 0 zinc-ribbons zinc_ribbon_9 PF14369.6 gi|21228728|ref|NP_634650.1| - 0.035 14.4 0.8 0.047 13.9 0.8 1.2 1 0 0 1 1 1 0 zinc-ribbon Zn-ribbon_8 PF09723.10 gi|21228728|ref|NP_634650.1| - 0.036 14.2 4.8 0.07 13.3 4.8 1.6 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|21228728|ref|NP_634650.1| - 0.04 13.8 4.2 0.81 9.7 4.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain TFIIS_C PF01096.18 gi|21228728|ref|NP_634650.1| - 0.043 13.7 2.9 4.2 7.3 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) RNHCP PF12647.7 gi|21228728|ref|NP_634650.1| - 0.044 13.8 0.2 0.048 13.6 0.2 1.1 1 0 0 1 1 1 0 RNHCP domain CpXC PF14353.6 gi|21228728|ref|NP_634650.1| - 0.047 13.7 1.7 0.5 10.4 0.0 2.0 1 1 1 2 2 2 0 CpXC protein YacG PF03884.14 gi|21228728|ref|NP_634650.1| - 0.049 13.4 0.6 3.3 7.5 0.1 2.1 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG DUF2072 PF09845.9 gi|21228728|ref|NP_634650.1| - 0.055 13.7 0.5 0.055 13.7 0.5 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein zf-Di19 PF05605.12 gi|21228728|ref|NP_634650.1| - 0.064 13.6 0.4 0.45 10.9 0.1 1.9 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Anti-TRAP PF15777.5 gi|21228728|ref|NP_634650.1| - 0.079 12.9 0.1 0.082 12.9 0.1 1.1 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein C1_1 PF00130.22 gi|21228728|ref|NP_634650.1| - 0.089 12.7 1.9 0.18 11.7 2.0 1.5 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) FANCL_C PF11793.8 gi|21228728|ref|NP_634650.1| - 0.098 12.8 1.7 0.74 10.0 0.1 2.0 1 1 1 2 2 2 0 FANCL C-terminal domain Zn_Tnp_IS1595 PF12760.7 gi|21228728|ref|NP_634650.1| - 0.11 12.5 5.8 0.14 12.2 0.1 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DiS_P_DiS PF06750.13 gi|21228728|ref|NP_634650.1| - 0.12 12.5 2.5 5.2 7.2 0.3 2.1 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain DUF1451 PF07295.11 gi|21228728|ref|NP_634650.1| - 0.13 12.3 0.7 0.15 12.1 0.7 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Zn_ribbon_SprT PF17283.2 gi|21228728|ref|NP_634650.1| - 0.26 11.2 8.0 1 9.3 0.3 2.4 2 1 0 2 2 2 0 SprT-like zinc ribbon domain zinc_ribbon_10 PF10058.9 gi|21228728|ref|NP_634650.1| - 0.58 9.9 4.3 14 5.5 4.0 2.2 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein UPF0547 PF10571.9 gi|21228728|ref|NP_634650.1| - 0.92 9.6 7.4 6.9 6.9 7.4 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 PutA_N PF18083.1 gi|21228729|ref|NP_634651.1| - 0.15 12.1 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Proline utilization A N-terminal domain Pcc1 PF09341.10 gi|21228730|ref|NP_634652.1| - 2.3e-11 43.6 0.3 2.6e-11 43.5 0.3 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 CHASE4 PF05228.13 gi|21228731|ref|NP_634653.1| - 4.1e-38 130.7 0.0 2.9e-35 121.5 0.0 2.3 2 0 0 2 2 2 2 CHASE4 domain HATPase_c PF02518.26 gi|21228731|ref|NP_634653.1| - 3.3e-27 95.2 0.0 7.8e-27 94.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|21228731|ref|NP_634653.1| - 1.4e-20 73.1 0.0 4.4e-20 71.5 0.0 1.9 2 0 0 2 2 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|21228731|ref|NP_634653.1| - 3.4e-13 49.8 0.0 2e-12 47.3 0.0 2.2 1 1 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|21228731|ref|NP_634653.1| - 1.3e-07 31.8 0.2 1.1e-06 28.8 0.1 2.7 2 1 0 2 2 2 1 PAS domain PAS PF00989.25 gi|21228731|ref|NP_634653.1| - 4.1e-05 23.5 0.0 0.00014 21.8 0.0 2.0 1 0 0 1 1 1 1 PAS fold HAMP PF00672.25 gi|21228731|ref|NP_634653.1| - 0.00064 20.1 0.0 0.0015 18.9 0.0 1.6 1 0 0 1 1 1 1 HAMP domain PAS_10 PF13596.6 gi|21228731|ref|NP_634653.1| - 0.0056 17.3 0.0 0.027 15.1 0.0 2.2 1 1 0 1 1 1 1 PAS domain HATPase_c_5 PF14501.6 gi|21228731|ref|NP_634653.1| - 0.0065 16.4 0.0 0.022 14.7 0.0 2.0 1 0 0 1 1 1 1 GHKL domain PAS_8 PF13188.7 gi|21228731|ref|NP_634653.1| - 0.0073 16.3 0.0 0.023 14.7 0.0 1.9 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 gi|21228731|ref|NP_634653.1| - 0.042 13.7 0.0 0.14 12.0 0.0 1.9 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|21228731|ref|NP_634653.1| - 0.07 13.1 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain sCache_3_3 PF17202.4 gi|21228731|ref|NP_634653.1| - 0.091 13.2 0.0 0.24 11.9 0.0 1.7 1 0 0 1 1 1 0 Single cache domain 3 Cache_3-Cache_2 PF17201.4 gi|21228731|ref|NP_634653.1| - 0.11 11.8 0.0 0.19 11.0 0.0 1.3 1 0 0 1 1 1 0 Cache 3/Cache 2 fusion domain Head_binding PF09008.10 gi|21228731|ref|NP_634653.1| - 0.12 12.7 0.5 0.66 10.3 0.1 2.2 2 0 0 2 2 2 0 Head binding Fungal_TACC PF12709.7 gi|21228731|ref|NP_634653.1| - 0.4 11.1 4.8 3.7 8.0 2.6 2.7 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins NosD PF05048.13 gi|21228732|ref|NP_634654.1| - 1.7e-39 135.6 39.2 1.7e-39 135.6 39.2 4.3 3 2 1 5 5 5 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|21228732|ref|NP_634654.1| - 9.8e-23 80.7 98.8 1.2e-12 48.0 26.3 5.5 3 2 3 6 6 6 3 Right handed beta helix region PKD PF00801.20 gi|21228732|ref|NP_634654.1| - 1.5e-17 63.1 11.2 5e-12 45.5 0.9 2.6 2 0 0 2 2 2 2 PKD domain PKD_3 PF16820.5 gi|21228732|ref|NP_634654.1| - 0.02 14.7 0.3 4.4 7.1 0.1 3.0 2 0 0 2 2 2 0 PKD-like domain Prok-JAB PF14464.6 gi|21228733|ref|NP_634655.1| - 2.1e-10 40.4 0.0 2.7e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.15 gi|21228733|ref|NP_634655.1| - 0.0059 16.6 0.0 0.0089 16.0 0.0 1.4 1 1 0 1 1 1 1 RadC-like JAB domain malic PF00390.19 gi|21228734|ref|NP_634656.1| - 6.4e-31 107.6 0.2 1.8e-28 99.6 0.2 2.4 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|21228734|ref|NP_634656.1| - 7.3e-23 81.1 2.6 6.6e-22 78.0 2.6 2.2 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain ELFV_dehydrog PF00208.21 gi|21228734|ref|NP_634656.1| - 0.001 18.9 0.2 0.016 14.9 0.1 2.2 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ThiF PF00899.21 gi|21228734|ref|NP_634656.1| - 0.036 13.4 0.5 0.08 12.3 0.5 1.5 1 0 0 1 1 1 0 ThiF family Methyltransf_25 PF13649.6 gi|21228735|ref|NP_634657.1| - 1.2e-20 74.0 0.0 2.1e-20 73.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|21228735|ref|NP_634657.1| - 1.4e-16 60.9 0.0 2.2e-16 60.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|21228735|ref|NP_634657.1| - 6.5e-15 55.7 0.0 1.1e-14 55.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|21228735|ref|NP_634657.1| - 1.7e-14 53.9 0.0 2.1e-14 53.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|21228735|ref|NP_634657.1| - 3.6e-12 46.2 0.0 1e-11 44.7 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|21228735|ref|NP_634657.1| - 9.5e-09 34.9 0.2 1.3e-08 34.5 0.2 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|21228735|ref|NP_634657.1| - 2.3e-08 34.0 0.0 4.2e-08 33.2 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|21228735|ref|NP_634657.1| - 6e-08 32.2 0.0 7e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain CMAS PF02353.20 gi|21228735|ref|NP_634657.1| - 8.9e-08 31.7 0.0 1.2e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_PK PF05891.12 gi|21228735|ref|NP_634657.1| - 1.1e-06 28.3 0.0 4.8e-06 26.2 0.0 1.7 1 1 1 2 2 2 1 AdoMet dependent proline di-methyltransferase RrnaAD PF00398.20 gi|21228735|ref|NP_634657.1| - 2e-06 27.1 0.0 2.9e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase NodS PF05401.11 gi|21228735|ref|NP_634657.1| - 7.9e-06 25.6 0.0 1.1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) GidB PF02527.15 gi|21228735|ref|NP_634657.1| - 0.00016 21.1 0.0 0.00022 20.6 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_16 PF10294.9 gi|21228735|ref|NP_634657.1| - 0.00043 20.1 0.0 0.0011 18.7 0.0 1.7 2 1 0 2 2 2 1 Lysine methyltransferase PrmA PF06325.13 gi|21228735|ref|NP_634657.1| - 0.0015 18.0 0.0 0.0021 17.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) YceI PF04264.13 gi|21228735|ref|NP_634657.1| - 0.0026 18.3 0.0 0.0034 18.0 0.0 1.2 1 0 0 1 1 1 1 YceI-like domain TehB PF03848.14 gi|21228735|ref|NP_634657.1| - 0.0034 16.8 0.1 0.0053 16.2 0.1 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_18 PF12847.7 gi|21228735|ref|NP_634657.1| - 0.0089 16.0 0.0 0.038 13.9 0.0 1.9 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_5 PF01795.19 gi|21228735|ref|NP_634657.1| - 0.028 13.9 0.0 0.041 13.4 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family Methyltransf_32 PF13679.6 gi|21228735|ref|NP_634657.1| - 0.05 13.6 0.0 0.065 13.2 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain DUF938 PF06080.12 gi|21228735|ref|NP_634657.1| - 0.058 13.2 0.0 0.21 11.4 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF938) TPP_enzyme_C PF02775.21 gi|21228736|ref|NP_634658.1| - 4.7e-26 91.4 0.2 8.6e-26 90.6 0.2 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|21228736|ref|NP_634658.1| - 8.1e-18 65.0 0.1 1.3e-17 64.3 0.1 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|21228736|ref|NP_634658.1| - 1.3e-10 40.7 16.0 4.2e-07 29.5 3.0 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21228736|ref|NP_634658.1| - 1.8e-08 34.1 12.4 0.00034 20.5 2.6 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21228736|ref|NP_634658.1| - 4.9e-07 29.5 15.4 0.00051 20.0 1.2 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21228736|ref|NP_634658.1| - 5.4e-07 29.6 12.9 4.8e-06 26.6 10.4 3.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21228736|ref|NP_634658.1| - 3.2e-06 27.2 9.9 3.2e-06 27.2 9.9 2.2 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21228736|ref|NP_634658.1| - 3.4e-06 27.1 7.1 9.2e-06 25.7 6.4 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain TPP_enzyme_N PF02776.18 gi|21228736|ref|NP_634658.1| - 4.9e-05 23.0 0.8 0.0013 18.3 0.3 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_7 PF12838.7 gi|21228736|ref|NP_634658.1| - 0.00078 20.0 17.1 0.00078 20.0 11.1 2.8 2 1 1 3 3 2 2 4Fe-4S dicluster domain PFOR_II PF17147.4 gi|21228736|ref|NP_634658.1| - 0.0018 18.6 0.0 0.004 17.4 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Fer4_16 PF13484.6 gi|21228736|ref|NP_634658.1| - 0.0033 18.3 8.6 0.0094 16.9 2.2 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|21228736|ref|NP_634658.1| - 0.0053 17.5 9.7 0.13 13.0 0.6 2.9 1 1 1 2 2 2 2 4Fe-4S single cluster domain Transket_pyr PF02779.24 gi|21228736|ref|NP_634658.1| - 0.011 15.4 0.2 0.037 13.7 0.1 2.0 2 1 0 2 2 2 0 Transketolase, pyrimidine binding domain Fer4_3 PF12798.7 gi|21228736|ref|NP_634658.1| - 0.025 15.5 6.7 0.025 15.5 6.7 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|21228736|ref|NP_634658.1| - 0.037 14.6 9.9 1.9 9.1 0.6 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|21228736|ref|NP_634658.1| - 0.05 14.1 18.0 0.32 11.6 4.1 3.3 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21228736|ref|NP_634658.1| - 0.066 13.7 12.4 0.51 10.8 3.2 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain AAA_30 PF13604.6 gi|21228736|ref|NP_634658.1| - 0.28 10.9 0.7 0.53 10.0 0.7 1.4 1 0 0 1 1 1 0 AAA domain Fer4_19 PF06902.11 gi|21228736|ref|NP_634658.1| - 0.59 10.3 3.8 2.5 8.2 3.8 2.1 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_22 PF17179.4 gi|21228736|ref|NP_634658.1| - 1 10.2 10.5 3.5 8.5 1.7 2.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21228736|ref|NP_634658.1| - 2.3 8.8 18.6 0.19 12.3 2.9 3.0 2 1 2 4 4 4 0 4Fe-4S dicluster domain POR PF01558.18 gi|21228737|ref|NP_634659.1| - 1.9e-41 142.0 0.0 2.4e-41 141.7 0.0 1.1 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase AMP-binding_C_2 PF14535.6 gi|21228738|ref|NP_634660.1| - 5.8e-25 87.4 0.3 3.3e-24 85.0 0.1 2.2 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|21228738|ref|NP_634660.1| - 7.8e-11 41.2 0.0 1.3e-10 40.5 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme GH3 PF03321.13 gi|21228738|ref|NP_634660.1| - 0.00036 19.5 0.0 0.0027 16.6 0.0 1.9 2 0 0 2 2 2 1 GH3 auxin-responsive promoter Sda PF08970.10 gi|21228738|ref|NP_634660.1| - 0.86 9.4 2.8 7.3 6.4 0.7 2.8 2 0 0 2 2 2 0 Sporulation inhibitor A MS_channel PF00924.18 gi|21228739|ref|NP_634661.1| - 2e-43 148.4 0.5 2.9e-43 147.8 0.5 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel RhodobacterPufX PF11511.8 gi|21228739|ref|NP_634661.1| - 0.21 11.2 4.3 3.3 7.4 0.2 2.6 1 1 1 2 2 2 0 Intrinsic membrane protein PufX Fasciclin PF02469.22 gi|21228740|ref|NP_634662.1| - 2.3e-66 221.8 3.7 8.1e-36 123.1 0.1 2.6 2 0 0 2 2 2 2 Fasciclin domain DUF4430 PF14478.6 gi|21228740|ref|NP_634662.1| - 2.9e-09 37.4 5.3 2.6e-05 24.7 0.2 2.9 2 0 0 2 2 2 2 Domain of unknown function (DUF4430) TM_helix PF05552.12 gi|21228741|ref|NP_634663.1| - 6.1e-27 93.4 37.8 5.4e-12 45.5 1.6 5.1 5 0 0 5 5 5 3 Conserved TM helix CorA PF01544.18 gi|21228742|ref|NP_634664.1| - 3.7e-74 249.7 3.5 4.9e-74 249.3 3.5 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein T2SSF PF00482.23 gi|21228742|ref|NP_634664.1| - 4 7.4 4.8 1.3 9.0 0.4 2.4 2 1 0 2 2 2 0 Type II secretion system (T2SS), protein F DUF432 PF04254.13 gi|21228743|ref|NP_634665.1| - 1.4e-41 141.5 0.0 2e-41 141.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF432) MS_channel PF00924.18 gi|21228744|ref|NP_634666.1| - 4.1e-54 183.3 0.7 4.1e-54 183.3 0.7 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel DUF1600 PF07667.11 gi|21228744|ref|NP_634666.1| - 0.03 14.5 0.8 0.053 13.7 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) Isochorismatase PF00857.20 gi|21228745|ref|NP_634667.1| - 1.5e-16 61.1 0.0 4.9e-12 46.4 0.0 2.9 2 1 1 3 3 3 2 Isochorismatase family ThiS PF02597.20 gi|21228746|ref|NP_634668.1| - 8.3e-22 77.6 0.0 9.4e-22 77.5 0.0 1.0 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.11 gi|21228746|ref|NP_634668.1| - 0.036 14.4 0.0 0.045 14.1 0.0 1.2 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) AFOR_C PF01314.18 gi|21228747|ref|NP_634669.1| - 1.4e-136 455.5 0.0 1.8e-136 455.1 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|21228747|ref|NP_634669.1| - 5.6e-74 248.3 0.0 1e-73 247.5 0.0 1.5 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain PocR PF10114.9 gi|21228748|ref|NP_634670.1| - 1.2e-39 135.6 0.9 1.9e-39 135.1 0.0 1.8 2 0 0 2 2 2 1 Sensory domain found in PocR PAS_9 PF13426.7 gi|21228748|ref|NP_634670.1| - 5.7e-31 106.8 2.4 3e-16 59.5 0.2 4.6 4 0 0 4 4 4 3 PAS domain PAS_3 PF08447.12 gi|21228748|ref|NP_634670.1| - 3.4e-30 104.2 0.6 7.3e-13 48.6 0.1 3.9 4 0 0 4 4 4 3 PAS fold PAS PF00989.25 gi|21228748|ref|NP_634670.1| - 4.3e-30 104.0 0.0 9.9e-14 51.3 0.0 3.7 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.12 gi|21228748|ref|NP_634670.1| - 4.6e-28 97.1 2.2 8.3e-28 96.3 0.7 2.3 2 0 0 2 2 2 1 Histidine kinase PAS_4 PF08448.10 gi|21228748|ref|NP_634670.1| - 2.8e-27 95.1 0.0 2.3e-09 37.4 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.7 gi|21228748|ref|NP_634670.1| - 2.8e-15 55.9 0.0 2.7e-06 27.3 0.0 3.1 3 0 0 3 3 3 2 PAS domain HATPase_c PF02518.26 gi|21228748|ref|NP_634670.1| - 2.6e-07 31.1 0.2 1.1e-06 29.1 0.2 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.7 gi|21228748|ref|NP_634670.1| - 0.00015 21.9 0.2 0.05 13.8 0.0 3.9 2 1 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 gi|21228748|ref|NP_634670.1| - 0.00086 19.3 0.0 0.0018 18.2 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|21228748|ref|NP_634670.1| - 0.002 18.8 0.3 0.0075 17.0 0.0 2.2 2 0 0 2 2 2 1 HWE histidine kinase PAS_10 PF13596.6 gi|21228748|ref|NP_634670.1| - 0.0034 18.0 0.1 0.021 15.4 0.0 2.3 2 0 0 2 2 2 1 PAS domain OEP PF02321.18 gi|21228748|ref|NP_634670.1| - 0.046 13.5 3.2 0.16 11.7 2.4 2.3 2 0 0 2 2 2 0 Outer membrane efflux protein MULE PF10551.9 gi|21228749|ref|NP_634671.1| - 0.00043 20.7 0.0 0.00093 19.6 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|21228749|ref|NP_634671.1| - 0.00065 19.3 0.1 0.0077 15.7 0.1 2.0 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.18 gi|21228749|ref|NP_634671.1| - 0.037 13.8 1.2 0.071 12.8 0.6 1.8 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family zf-3CxxC_2 PF17180.4 gi|21228749|ref|NP_634671.1| - 0.12 13.2 0.6 0.53 11.1 0.6 2.1 1 0 0 1 1 1 0 Zinc-binding domain Sgf11 PF08209.11 gi|21228749|ref|NP_634671.1| - 0.88 9.2 3.3 19 4.9 0.7 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-C2HC_2 PF13913.6 gi|21228749|ref|NP_634671.1| - 1.3 9.0 3.4 0.47 10.4 0.2 2.0 2 0 0 2 2 2 0 zinc-finger of a C2HC-type ApbE PF02424.15 gi|21228750|ref|NP_634672.1| - 0.0027 17.3 3.3 0.0043 16.6 0.2 2.3 2 1 0 2 2 2 1 ApbE family Aminotran_1_2 PF00155.21 gi|21228751|ref|NP_634673.1| - 9.4e-59 199.4 0.0 1.1e-58 199.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|21228751|ref|NP_634673.1| - 0.0017 17.0 0.0 0.0023 16.5 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Abhydrolase_1 PF00561.20 gi|21228752|ref|NP_634674.1| - 1.9e-23 83.4 0.0 2.6e-16 60.1 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|21228752|ref|NP_634674.1| - 2e-21 77.6 0.4 2.4e-21 77.4 0.4 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|21228752|ref|NP_634674.1| - 4.5e-13 49.0 0.0 9.2e-13 48.0 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|21228752|ref|NP_634674.1| - 0.00017 21.6 0.0 0.00031 20.8 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Thioesterase PF00975.20 gi|21228752|ref|NP_634674.1| - 0.014 15.5 0.0 0.029 14.5 0.0 1.5 1 1 1 2 2 2 0 Thioesterase domain SCFA_trans PF02667.14 gi|21228752|ref|NP_634674.1| - 0.034 13.2 0.0 0.04 12.9 0.0 1.1 1 0 0 1 1 1 0 Short chain fatty acid transporter FSH1 PF03959.13 gi|21228752|ref|NP_634674.1| - 0.25 11.0 0.0 4.3 6.9 0.0 2.3 2 1 1 3 3 3 0 Serine hydrolase (FSH1) DUF2124 PF09897.9 gi|21228754|ref|NP_634676.1| - 5.4e-51 172.2 0.1 6.1e-51 172.0 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) MCH PF02289.16 gi|21228755|ref|NP_634677.1| - 2.7e-132 440.8 0.0 3.1e-132 440.6 0.0 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) Peptidase_U32 PF01136.19 gi|21228756|ref|NP_634678.1| - 1.6e-82 276.2 0.0 2.3e-82 275.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase family U32 GTP_EFTU_D2 PF03144.25 gi|21228756|ref|NP_634678.1| - 0.11 12.9 2.1 0.74 10.2 0.1 2.6 2 1 1 3 3 3 0 Elongation factor Tu domain 2 Acyl_transf_3 PF01757.22 gi|21228757|ref|NP_634679.1| - 1.6e-14 53.7 47.1 3.4e-14 52.7 47.1 1.5 1 1 0 1 1 1 1 Acyltransferase family OpgC_C PF10129.9 gi|21228757|ref|NP_634679.1| - 3.2e-05 23.0 30.7 8.1e-05 21.7 30.7 1.8 1 1 0 1 1 1 1 OpgC protein FKBP_C PF00254.28 gi|21228758|ref|NP_634680.1| - 1.1e-14 54.4 0.2 6.9e-11 42.3 0.1 2.6 2 1 0 2 2 2 2 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP26_C PF18046.1 gi|21228758|ref|NP_634680.1| - 7.2e-08 32.4 0.0 1.5e-07 31.4 0.0 1.6 1 0 0 1 1 1 1 FKBP26_C-terminal NikR_C PF08753.11 gi|21228759|ref|NP_634681.1| - 5.8e-28 96.9 1.9 8.3e-28 96.4 1.9 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|21228759|ref|NP_634681.1| - 5e-06 26.3 0.0 1e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|21228759|ref|NP_634681.1| - 0.03 14.4 0.0 0.12 12.4 0.0 1.9 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system Bromo_TP PF07524.13 gi|21228759|ref|NP_634681.1| - 0.037 14.0 0.0 0.068 13.2 0.0 1.4 1 0 0 1 1 1 0 Bromodomain associated RHH_8 PF17723.1 gi|21228759|ref|NP_634681.1| - 0.056 13.6 0.1 0.079 13.1 0.0 1.3 1 1 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family Acetyltransf_1 PF00583.25 gi|21228760|ref|NP_634682.1| - 8.6e-19 67.9 0.1 1.3e-18 67.4 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21228760|ref|NP_634682.1| - 5.4e-13 49.2 0.1 9.2e-13 48.4 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21228760|ref|NP_634682.1| - 1.9e-11 44.0 0.1 3e-11 43.3 0.1 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|21228760|ref|NP_634682.1| - 2e-11 44.2 0.8 2.4e-11 44.0 0.8 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21228760|ref|NP_634682.1| - 1.5e-10 40.9 0.0 2.4e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|21228760|ref|NP_634682.1| - 2.5e-07 30.8 0.0 3.3e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|21228760|ref|NP_634682.1| - 8.7e-06 25.4 0.7 1.1e-05 25.0 0.7 1.2 1 0 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_3 PF13302.7 gi|21228760|ref|NP_634682.1| - 1.6e-05 25.6 0.0 1.9e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|21228760|ref|NP_634682.1| - 0.0053 16.4 0.0 0.0069 16.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21228760|ref|NP_634682.1| - 0.0071 16.4 0.0 0.012 15.7 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Nudix_hydro PF18290.1 gi|21228760|ref|NP_634682.1| - 0.058 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Nudix hydrolase domain Acetyltransf_1 PF00583.25 gi|21228761|ref|NP_634683.1| - 8.9e-20 71.1 0.0 1.2e-19 70.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21228761|ref|NP_634683.1| - 3.1e-15 56.4 0.3 4.8e-15 55.8 0.3 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21228761|ref|NP_634683.1| - 2.4e-13 50.1 0.2 3.5e-13 49.6 0.2 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|21228761|ref|NP_634683.1| - 4e-12 46.5 0.5 4.8e-12 46.3 0.5 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21228761|ref|NP_634683.1| - 6.6e-11 42.0 0.0 9.8e-11 41.5 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|21228761|ref|NP_634683.1| - 1.2e-09 38.3 0.0 1.7e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|21228761|ref|NP_634683.1| - 1.4e-07 31.2 1.3 1.8e-07 30.8 1.3 1.2 1 0 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_3 PF13302.7 gi|21228761|ref|NP_634683.1| - 8.5e-07 29.7 0.0 9.7e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21228761|ref|NP_634683.1| - 0.0033 17.5 0.0 0.0092 16.1 0.0 1.7 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Acetyltransf_8 PF13523.6 gi|21228761|ref|NP_634683.1| - 0.0072 16.0 0.0 0.01 15.5 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|21228761|ref|NP_634683.1| - 0.017 14.7 0.0 0.021 14.4 0.0 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase Nudix_hydro PF18290.1 gi|21228761|ref|NP_634683.1| - 0.11 12.5 0.2 0.32 11.0 0.0 1.8 2 1 0 2 2 2 0 Nudix hydrolase domain Na_Ca_ex PF01699.24 gi|21228762|ref|NP_634684.1| - 4.5e-51 172.8 40.4 1.6e-26 93.1 17.6 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein DUF3865 PF12981.7 gi|21228762|ref|NP_634684.1| - 0.027 14.4 0.3 0.14 12.0 0.1 2.1 2 1 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3865) ACT_7 PF13840.6 gi|21228763|ref|NP_634685.1| - 7.5e-24 83.3 0.0 1.1e-23 82.7 0.0 1.3 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|21228763|ref|NP_634685.1| - 0.00012 21.8 0.3 0.00069 19.3 0.0 2.1 2 0 0 2 2 2 1 ACT domain Castor1_N PF18700.1 gi|21228763|ref|NP_634685.1| - 0.064 13.1 0.2 0.17 11.8 0.0 1.8 2 0 0 2 2 2 0 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Mlf1IP PF10248.9 gi|21228763|ref|NP_634685.1| - 0.16 11.9 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Myelodysplasia-myeloid leukemia factor 1-interacting protein Na_Ala_symp PF01235.17 gi|21228764|ref|NP_634686.1| - 4.7e-142 473.9 27.5 6e-142 473.6 27.5 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family CARDB PF07705.11 gi|21228765|ref|NP_634687.1| - 4.5e-13 49.3 0.0 9.1e-05 22.7 0.0 4.3 2 2 0 3 3 3 3 CARDB DUF2393 PF09624.10 gi|21228765|ref|NP_634687.1| - 0.0024 17.9 0.2 0.74 9.8 0.0 3.2 4 0 0 4 4 4 1 Protein of unknown function (DUF2393) TRAP_beta PF05753.14 gi|21228765|ref|NP_634687.1| - 0.0029 17.0 0.0 1.4 8.3 0.0 3.3 3 0 0 3 3 3 2 Translocon-associated protein beta (TRAPB) NPCBM_assoc PF10633.9 gi|21228765|ref|NP_634687.1| - 0.0092 16.2 0.0 7.2 6.9 0.0 3.9 4 2 2 6 6 6 1 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|21228765|ref|NP_634687.1| - 0.016 15.5 0.0 14 6.0 0.0 3.4 3 1 0 3 3 3 0 Domain of unknown function DUF11 FtsX PF02687.21 gi|21228766|ref|NP_634688.1| - 6.5e-05 23.3 1.0 6.5e-05 23.3 1.0 3.1 3 0 0 3 3 3 2 FtsX-like permease family ABC_tran PF00005.27 gi|21228767|ref|NP_634689.1| - 1e-32 113.5 0.1 2.1e-32 112.5 0.0 1.6 2 0 0 2 2 1 1 ABC transporter SMC_N PF02463.19 gi|21228767|ref|NP_634689.1| - 1.2e-07 31.4 0.2 1.1e-06 28.3 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|21228767|ref|NP_634689.1| - 6.2e-07 29.5 0.0 0.033 14.0 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 gi|21228767|ref|NP_634689.1| - 1.7e-05 25.4 1.1 0.0075 16.8 0.1 2.6 2 1 0 3 3 2 1 AAA domain AAA_16 PF13191.6 gi|21228767|ref|NP_634689.1| - 4.5e-05 23.9 0.3 9.9e-05 22.8 0.3 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|21228767|ref|NP_634689.1| - 0.0001 21.9 0.1 0.00031 20.4 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|21228767|ref|NP_634689.1| - 0.00014 21.5 0.1 0.008 15.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|21228767|ref|NP_634689.1| - 0.00018 21.8 0.5 0.0013 19.0 0.5 2.3 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|21228767|ref|NP_634689.1| - 0.00045 20.2 0.1 0.00079 19.4 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase SRP54 PF00448.22 gi|21228767|ref|NP_634689.1| - 0.00066 19.4 0.0 0.017 14.8 0.0 2.4 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain IstB_IS21 PF01695.17 gi|21228767|ref|NP_634689.1| - 0.0011 18.7 0.1 0.019 14.7 0.0 2.3 2 1 0 2 2 2 1 IstB-like ATP binding protein cobW PF02492.19 gi|21228767|ref|NP_634689.1| - 0.0019 17.8 0.0 0.0043 16.6 0.0 1.6 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 gi|21228767|ref|NP_634689.1| - 0.0021 18.3 0.0 0.0055 17.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|21228767|ref|NP_634689.1| - 0.0024 17.6 0.5 0.23 11.1 0.0 2.5 2 1 1 3 3 3 1 AAA ATPase domain AAA_24 PF13479.6 gi|21228767|ref|NP_634689.1| - 0.0048 16.6 0.2 0.016 15.0 0.0 2.0 2 0 0 2 2 2 1 AAA domain PCB_OB PF17092.5 gi|21228767|ref|NP_634689.1| - 0.007 17.1 0.1 0.015 16.0 0.1 1.5 1 0 0 1 1 1 1 Penicillin-binding protein OB-like domain ATPase PF06745.13 gi|21228767|ref|NP_634689.1| - 0.011 15.1 0.7 0.93 8.8 0.1 3.0 2 1 1 3 3 3 0 KaiC AAA_23 PF13476.6 gi|21228767|ref|NP_634689.1| - 0.016 15.7 0.3 0.016 15.7 0.3 2.0 2 1 0 2 2 1 0 AAA domain T2SSE PF00437.20 gi|21228767|ref|NP_634689.1| - 0.018 14.1 0.1 0.036 13.1 0.1 1.5 1 1 0 1 1 1 0 Type II/IV secretion system protein SRPRB PF09439.10 gi|21228767|ref|NP_634689.1| - 0.019 14.4 0.0 0.036 13.5 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_33 PF13671.6 gi|21228767|ref|NP_634689.1| - 0.02 15.1 0.1 0.052 13.7 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|21228767|ref|NP_634689.1| - 0.021 14.8 0.0 0.056 13.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|21228767|ref|NP_634689.1| - 0.022 14.5 0.4 0.059 13.1 0.0 1.9 2 1 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|21228767|ref|NP_634689.1| - 0.023 14.9 0.2 0.3 11.3 0.2 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ATPase_2 PF01637.18 gi|21228767|ref|NP_634689.1| - 0.032 14.1 0.0 0.062 13.2 0.0 1.6 2 0 0 2 2 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|21228767|ref|NP_634689.1| - 0.032 14.1 0.2 0.084 12.8 0.1 1.7 1 1 0 1 1 1 0 NACHT domain MMR_HSR1 PF01926.23 gi|21228767|ref|NP_634689.1| - 0.033 14.3 0.2 0.067 13.3 0.2 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase TniB PF05621.11 gi|21228767|ref|NP_634689.1| - 0.047 13.1 0.2 9.7 5.6 0.0 2.4 1 1 0 2 2 2 0 Bacterial TniB protein NB-ARC PF00931.22 gi|21228767|ref|NP_634689.1| - 0.066 12.4 0.1 0.13 11.4 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain G-alpha PF00503.20 gi|21228767|ref|NP_634689.1| - 0.068 12.3 0.0 0.085 12.0 0.0 1.4 1 1 0 1 1 1 0 G-protein alpha subunit MobB PF03205.14 gi|21228767|ref|NP_634689.1| - 0.09 12.7 0.1 0.25 11.2 0.0 1.9 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 gi|21228767|ref|NP_634689.1| - 0.97 9.9 6.2 18 5.8 3.4 3.4 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 gi|21228769|ref|NP_634691.1| - 3e-63 211.5 0.2 4.6e-63 210.9 0.2 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|21228769|ref|NP_634691.1| - 1.1e-17 63.6 0.0 1.9e-17 62.8 0.0 1.4 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|21228769|ref|NP_634691.1| - 3.1e-10 40.2 0.0 5.8e-10 39.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|21228769|ref|NP_634691.1| - 3.7e-07 29.5 0.1 3.2e-06 26.4 0.1 2.2 1 1 0 1 1 1 1 MCM P-loop domain AAA PF00004.29 gi|21228769|ref|NP_634691.1| - 2.3e-06 28.1 0.0 5.2e-06 26.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|21228769|ref|NP_634691.1| - 8.6e-05 22.0 0.4 0.0067 15.8 0.1 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|21228769|ref|NP_634691.1| - 0.00059 19.6 0.1 0.013 15.3 0.1 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|21228769|ref|NP_634691.1| - 0.0026 17.5 0.0 0.37 10.5 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 gi|21228769|ref|NP_634691.1| - 0.016 15.5 0.0 0.62 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_2 PF07724.14 gi|21228769|ref|NP_634691.1| - 0.087 12.9 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) HTH_ABP1_N PF18107.1 gi|21228769|ref|NP_634691.1| - 0.16 11.7 0.0 0.43 10.3 0.0 1.7 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain DUF58 PF01882.18 gi|21228770|ref|NP_634692.1| - 3e-19 69.1 0.0 5.2e-19 68.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|21228770|ref|NP_634692.1| - 1.3e-06 29.0 0.1 5.2e-06 27.1 0.1 2.1 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|21228770|ref|NP_634692.1| - 2e-05 24.1 0.2 4.1e-05 23.1 0.2 1.5 1 1 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.28 gi|21228770|ref|NP_634692.1| - 0.0037 17.5 0.8 0.008 16.4 0.8 1.7 1 1 0 1 1 1 1 von Willebrand factor type A domain ERF PF04404.12 gi|21228770|ref|NP_634692.1| - 0.053 13.4 0.1 0.14 12.0 0.1 1.7 1 0 0 1 1 1 0 ERF superfamily BatA PF07584.11 gi|21228771|ref|NP_634693.1| - 5e-12 46.0 2.6 5e-12 46.0 2.6 2.2 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal VWA_2 PF13519.6 gi|21228771|ref|NP_634693.1| - 0.0067 17.1 0.2 0.024 15.3 0.1 2.0 2 1 0 2 2 2 1 von Willebrand factor type A domain CadC_C1 PF18500.1 gi|21228771|ref|NP_634693.1| - 0.0085 16.2 0.0 0.021 15.0 0.0 1.6 1 0 0 1 1 1 1 CadC C-terminal domain 1 Marek_SORF3 PF07153.11 gi|21228771|ref|NP_634693.1| - 0.06 12.7 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Marek's disease-like virus SORF3 protein GATase1_like PF07090.11 gi|21228772|ref|NP_634694.1| - 2.5e-10 40.2 0.0 0.0002 20.9 0.0 2.3 2 0 0 2 2 2 2 Putative glutamine amidotransferase VWA_2 PF13519.6 gi|21228772|ref|NP_634694.1| - 7.3e-08 33.0 0.2 2.3e-07 31.4 0.2 1.9 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|21228772|ref|NP_634694.1| - 1.7e-06 28.4 0.3 0.00016 22.0 0.1 2.4 2 0 0 2 2 2 1 von Willebrand factor type A domain ThuA PF06283.11 gi|21228772|ref|NP_634694.1| - 0.0012 19.2 0.0 0.0028 17.9 0.0 1.6 1 1 0 1 1 1 1 Trehalose utilisation Phage_holin_3_7 PF05449.11 gi|21228772|ref|NP_634694.1| - 0.16 12.0 0.1 0.3 11.2 0.1 1.4 1 0 0 1 1 1 0 Putative 3TM holin, Phage_holin_3 DUF4131 PF13567.6 gi|21228772|ref|NP_634694.1| - 0.35 10.5 1.4 1.7 8.3 0.5 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) AI-2E_transport PF01594.16 gi|21228773|ref|NP_634695.1| - 2.3e-43 148.6 39.3 2.7e-43 148.4 39.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF4177 PF13783.6 gi|21228774|ref|NP_634696.1| - 0.033 14.5 0.2 0.065 13.5 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4177) HEAT_2 PF13646.6 gi|21228776|ref|NP_634698.1| - 6.1e-37 125.9 14.0 1.4e-07 31.8 0.2 7.6 6 1 1 7 7 7 7 HEAT repeats HEAT PF02985.22 gi|21228776|ref|NP_634698.1| - 8.3e-18 63.0 7.5 1.1 9.8 0.0 11.5 13 0 0 13 13 12 4 HEAT repeat Cnd1 PF12717.7 gi|21228776|ref|NP_634698.1| - 9.1e-10 38.8 2.9 0.12 12.4 0.0 5.7 4 2 1 6 6 6 2 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|21228776|ref|NP_634698.1| - 1.1e-09 37.5 0.8 0.0018 16.9 0.2 5.1 3 2 2 5 5 5 4 Adaptin N terminal region Vac14_Fab1_bd PF12755.7 gi|21228776|ref|NP_634698.1| - 4.7e-08 33.5 0.0 0.037 14.6 0.0 5.2 4 1 2 6 6 6 1 Vacuolar 14 Fab1-binding region HEAT_EZ PF13513.6 gi|21228776|ref|NP_634698.1| - 1.5e-07 31.8 5.0 1.8 9.1 0.0 7.1 8 1 0 8 8 7 3 HEAT-like repeat API5 PF05918.11 gi|21228776|ref|NP_634698.1| - 2.5e-07 29.9 5.2 0.026 13.3 0.1 4.8 3 1 2 5 5 5 2 Apoptosis inhibitory protein 5 (API5) CLASP_N PF12348.8 gi|21228776|ref|NP_634698.1| - 0.0001 22.0 0.0 2.2 7.8 0.0 4.6 3 2 1 5 5 5 1 CLASP N terminal Arm PF00514.23 gi|21228776|ref|NP_634698.1| - 0.0001 22.2 2.7 54 4.0 0.0 7.7 9 0 0 9 9 9 0 Armadillo/beta-catenin-like repeat ATP13 PF12921.7 gi|21228776|ref|NP_634698.1| - 0.0031 17.4 0.0 23 4.9 0.0 5.6 6 2 0 7 7 7 0 Mitochondrial ATPase expression AvrM_N PF18247.1 gi|21228776|ref|NP_634698.1| - 0.0038 17.1 0.3 6.3 6.8 0.0 4.9 5 1 1 6 6 6 1 Flax-rust effector AvrM N-terminal domain Tti2 PF10521.9 gi|21228776|ref|NP_634698.1| - 0.034 13.7 0.0 4.5 6.7 0.0 3.2 2 1 1 3 3 3 0 Tti2 family FliG_N PF14842.6 gi|21228776|ref|NP_634698.1| - 0.11 13.1 0.4 0.71 10.4 0.0 2.5 2 0 0 2 2 2 0 FliG N-terminal domain DUF1281 PF06924.11 gi|21228776|ref|NP_634698.1| - 0.15 11.5 0.1 42 3.6 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1281) Fanconi_A PF03511.14 gi|21228776|ref|NP_634698.1| - 0.18 11.8 0.0 0.62 10.0 0.0 2.0 1 0 0 1 1 1 0 Fanconi anaemia group A protein GDPD_2 PF13653.6 gi|21228776|ref|NP_634698.1| - 1.2 9.7 5.0 1.6e+02 2.9 0.0 5.5 7 0 0 7 7 6 0 Glycerophosphoryl diester phosphodiesterase family Serpin PF00079.20 gi|21228777|ref|NP_634699.1| - 1.4e-118 396.5 3.7 1.6e-118 396.3 3.7 1.0 1 0 0 1 1 1 1 Serpin (serine protease inhibitor) TRADD_N PF09034.10 gi|21228778|ref|NP_634700.1| - 0.031 14.3 0.1 0.067 13.2 0.1 1.5 1 0 0 1 1 1 0 TRADD, N-terminal domain CsbD PF05532.12 gi|21228779|ref|NP_634701.1| - 4.2e-14 52.2 13.7 5e-14 51.9 13.7 1.2 1 0 0 1 1 1 1 CsbD-like DUF488 PF04343.13 gi|21228781|ref|NP_634703.1| - 5.6e-27 94.8 0.0 8.8e-27 94.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF488 HTH_45 PF14947.6 gi|21228781|ref|NP_634703.1| - 0.0014 18.5 0.1 0.0049 16.8 0.1 1.9 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.6 gi|21228781|ref|NP_634703.1| - 0.13 12.7 0.0 21 5.7 0.0 2.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain DUF4065 PF13274.6 gi|21228781|ref|NP_634703.1| - 0.21 12.5 3.4 0.15 13.0 1.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4065) ParE_toxin PF05016.15 gi|21228782|ref|NP_634704.1| - 1.8e-05 25.3 0.8 2e-05 25.1 0.8 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE DUF2683 PF10884.8 gi|21228783|ref|NP_634705.1| - 6.4e-23 80.8 1.4 7.4e-23 80.6 1.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) rve PF00665.26 gi|21228784|ref|NP_634706.1| - 4.1e-10 39.9 0.0 7.4e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain HTH_7 PF02796.15 gi|21228784|ref|NP_634706.1| - 2.2e-08 34.0 1.2 3.7e-07 30.1 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_38 PF13936.6 gi|21228784|ref|NP_634706.1| - 0.00031 20.4 0.1 0.00076 19.2 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|21228784|ref|NP_634706.1| - 0.00087 19.0 0.1 0.0019 17.9 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 gi|21228784|ref|NP_634706.1| - 0.00088 19.3 0.1 0.0023 17.9 0.1 1.7 1 1 0 1 1 1 1 Winged helix-turn helix HTH_IclR PF09339.10 gi|21228784|ref|NP_634706.1| - 0.016 15.0 0.0 0.031 14.1 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain Terminase_5 PF06056.12 gi|21228784|ref|NP_634706.1| - 0.024 14.5 0.0 0.045 13.6 0.0 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_5 PF01022.20 gi|21228784|ref|NP_634706.1| - 0.048 13.5 0.0 13 5.7 0.0 2.5 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_3 PF01381.22 gi|21228784|ref|NP_634706.1| - 0.075 13.1 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix OxoDH_E1alpha_N PF12573.8 gi|21228784|ref|NP_634706.1| - 0.16 11.7 0.1 0.34 10.7 0.1 1.4 1 0 0 1 1 1 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal HTH_40 PF14493.6 gi|21228784|ref|NP_634706.1| - 0.17 12.4 0.0 0.37 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain GcrA PF07750.11 gi|21228784|ref|NP_634706.1| - 0.19 12.1 0.0 0.31 11.5 0.0 1.3 1 0 0 1 1 1 0 GcrA cell cycle regulator TnsD PF15978.5 gi|21228784|ref|NP_634706.1| - 0.21 10.5 0.0 0.28 10.1 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D RVT_1 PF00078.27 gi|21228785|ref|NP_634707.1| - 5.1e-38 130.8 0.0 9.5e-38 129.9 0.0 1.5 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_N PF13655.6 gi|21228785|ref|NP_634707.1| - 1.3e-28 99.0 2.9 3.3e-28 97.8 2.9 1.7 1 0 0 1 1 1 1 N-terminal domain of reverse transcriptase GIIM PF08388.11 gi|21228785|ref|NP_634707.1| - 4.9e-24 84.2 4.9 1.4e-23 82.7 4.9 1.8 1 0 0 1 1 1 1 Group II intron, maturase-specific domain IstB_IS21 PF01695.17 gi|21228787|ref|NP_634709.1| - 2.1e-64 216.5 0.0 2.4e-64 216.3 0.0 1.0 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 gi|21228787|ref|NP_634709.1| - 2.7e-05 24.6 0.0 4.2e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Bac_DnaA PF00308.18 gi|21228787|ref|NP_634709.1| - 5.4e-05 23.1 0.0 7e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial dnaA protein RuvB_N PF05496.12 gi|21228787|ref|NP_634709.1| - 0.00011 22.0 0.0 0.00016 21.4 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain PhoH PF02562.16 gi|21228787|ref|NP_634709.1| - 0.00022 20.7 0.0 0.0003 20.3 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein AAA_28 PF13521.6 gi|21228787|ref|NP_634709.1| - 0.00049 20.4 0.0 0.00075 19.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|21228787|ref|NP_634709.1| - 0.00049 20.5 0.0 0.0084 16.5 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|21228787|ref|NP_634709.1| - 0.0013 19.0 0.0 0.42 10.9 0.0 2.3 1 1 1 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|21228787|ref|NP_634709.1| - 0.0063 16.4 0.0 0.015 15.2 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase DUF815 PF05673.13 gi|21228787|ref|NP_634709.1| - 0.022 14.0 0.0 0.028 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_5 PF07728.14 gi|21228787|ref|NP_634709.1| - 0.024 14.7 0.3 0.06 13.4 0.3 1.9 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|21228787|ref|NP_634709.1| - 0.025 15.1 0.4 0.069 13.7 0.4 2.1 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|21228787|ref|NP_634709.1| - 0.026 14.6 0.0 0.037 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|21228787|ref|NP_634709.1| - 0.039 13.7 0.0 0.14 11.9 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|21228787|ref|NP_634709.1| - 0.056 13.2 0.0 0.15 11.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain DUF2240 PF09999.9 gi|21228787|ref|NP_634709.1| - 0.076 12.6 0.0 0.26 10.9 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2240) RmuC PF02646.16 gi|21228787|ref|NP_634709.1| - 0.084 12.0 0.0 0.14 11.3 0.0 1.3 1 0 0 1 1 1 0 RmuC family AAA_25 PF13481.6 gi|21228787|ref|NP_634709.1| - 0.088 12.4 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.10 gi|21228787|ref|NP_634709.1| - 0.096 12.1 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_17 PF13207.6 gi|21228787|ref|NP_634709.1| - 0.11 12.9 0.0 0.26 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|21228787|ref|NP_634709.1| - 0.12 11.4 0.1 0.3 10.0 0.0 1.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RNA_helicase PF00910.22 gi|21228787|ref|NP_634709.1| - 0.14 12.5 0.0 0.25 11.7 0.0 1.6 1 1 0 1 1 1 0 RNA helicase Mg_chelatase PF01078.21 gi|21228787|ref|NP_634709.1| - 0.15 11.4 0.0 0.3 10.5 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI PHAT PF09246.10 gi|21228789|ref|NP_634711.1| - 0.14 12.0 1.5 0.27 11.1 0.5 2.0 2 1 0 2 2 2 0 PHAT Radical_SAM PF04055.21 gi|21228790|ref|NP_634712.1| - 3.3e-12 47.1 0.0 1.7e-11 44.8 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|21228790|ref|NP_634712.1| - 2.7e-05 24.2 0.0 4.4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain DASH_Spc19 PF08287.11 gi|21228791|ref|NP_634713.1| - 0.025 14.5 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Spc19 SlyX PF04102.12 gi|21228791|ref|NP_634713.1| - 0.036 14.7 0.1 0.054 14.1 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.11 gi|21228791|ref|NP_634713.1| - 0.22 11.3 0.4 0.22 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.14 gi|21228792|ref|NP_634714.1| - 2.5e-73 247.0 0.0 2.9e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21228792|ref|NP_634714.1| - 4.8e-10 39.7 6.7 1.3e-09 38.2 6.7 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21228792|ref|NP_634714.1| - 0.00015 22.0 1.1 0.62 10.3 0.0 3.0 2 1 1 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|21228792|ref|NP_634714.1| - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) zf-RING_5 PF14634.6 gi|21228792|ref|NP_634714.1| - 0.34 10.9 7.9 1 9.4 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21228792|ref|NP_634714.1| - 1.2 10.0 7.5 0.17 12.6 2.9 2.0 2 0 0 2 2 2 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|21228792|ref|NP_634714.1| - 1.3 9.7 5.2 31 5.3 0.5 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Putative_PNPOx PF01243.20 gi|21228793|ref|NP_634715.1| - 3e-13 49.8 0.0 4.1e-13 49.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF1428 PF07237.11 gi|21228793|ref|NP_634715.1| - 0.046 14.0 0.0 0.063 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1428) NAD_binding_8 PF13450.6 gi|21228794|ref|NP_634716.1| - 2.9e-14 53.0 0.0 6.1e-14 52.0 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 gi|21228794|ref|NP_634716.1| - 6.6e-14 52.1 0.0 8e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase HI0933_like PF03486.14 gi|21228794|ref|NP_634716.1| - 1.2e-06 27.5 0.0 3.1e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 HI0933-like protein DAO PF01266.24 gi|21228794|ref|NP_634716.1| - 2.4e-06 27.4 0.0 1.5e-05 24.8 0.0 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|21228794|ref|NP_634716.1| - 1.5e-05 24.3 0.0 5.5e-05 22.4 0.0 1.8 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.19 gi|21228794|ref|NP_634716.1| - 5.8e-05 22.5 0.0 0.0001 21.7 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|21228794|ref|NP_634716.1| - 9.2e-05 22.0 0.0 0.00021 20.8 0.0 1.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|21228794|ref|NP_634716.1| - 9.3e-05 21.8 0.0 0.02 14.1 0.0 2.4 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|21228794|ref|NP_634716.1| - 0.00011 21.6 0.3 0.0038 16.5 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|21228794|ref|NP_634716.1| - 0.0019 18.7 1.2 0.026 15.1 0.0 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|21228794|ref|NP_634716.1| - 0.0022 17.2 0.1 0.026 13.6 0.0 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A GDI PF00996.18 gi|21228794|ref|NP_634716.1| - 0.0063 15.1 0.2 0.012 14.2 0.2 1.4 1 0 0 1 1 1 1 GDP dissociation inhibitor Thi4 PF01946.17 gi|21228794|ref|NP_634716.1| - 0.013 14.8 0.1 0.065 12.5 0.0 2.0 2 0 0 2 2 2 0 Thi4 family Trp_halogenase PF04820.14 gi|21228794|ref|NP_634716.1| - 0.16 10.7 0.0 0.26 10.1 0.0 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Radical_SAM PF04055.21 gi|21228795|ref|NP_634717.1| - 0.00043 20.7 0.5 0.001 19.5 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily rve PF00665.26 gi|21228796|ref|NP_634718.1| - 3.6e-10 40.1 0.0 7.4e-10 39.1 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain HTH_7 PF02796.15 gi|21228796|ref|NP_634718.1| - 3.4e-06 27.0 0.2 3.1e-05 24.0 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_29 PF13551.6 gi|21228796|ref|NP_634718.1| - 8.3e-06 25.7 0.0 2.3e-05 24.3 0.0 1.7 1 1 0 1 1 1 1 Winged helix-turn helix HTH_38 PF13936.6 gi|21228796|ref|NP_634718.1| - 0.00013 21.6 0.0 0.00031 20.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TnsD PF15978.5 gi|21228796|ref|NP_634718.1| - 0.00022 20.3 0.0 0.00031 19.8 0.0 1.1 1 0 0 1 1 1 1 Tn7-like transposition protein D HTH_23 PF13384.6 gi|21228796|ref|NP_634718.1| - 0.00044 20.0 0.0 0.00095 18.9 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain MerR PF00376.23 gi|21228796|ref|NP_634718.1| - 0.0011 18.7 0.1 0.002 17.9 0.1 1.4 1 0 0 1 1 1 1 MerR family regulatory protein Sigma70_r4_2 PF08281.12 gi|21228796|ref|NP_634718.1| - 0.002 17.8 0.0 0.0045 16.6 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Terminase_5 PF06056.12 gi|21228796|ref|NP_634718.1| - 0.0042 16.9 0.0 0.0082 16.0 0.0 1.4 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) MerR_1 PF13411.6 gi|21228796|ref|NP_634718.1| - 0.0078 16.3 0.0 0.015 15.4 0.0 1.4 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_36 PF13730.6 gi|21228796|ref|NP_634718.1| - 0.0081 16.1 0.0 0.021 14.8 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_40 PF14493.6 gi|21228796|ref|NP_634718.1| - 0.0098 16.3 0.0 0.019 15.4 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain DUF2312 PF10073.9 gi|21228796|ref|NP_634718.1| - 0.024 14.3 0.1 0.42 10.3 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) HTH_3 PF01381.22 gi|21228796|ref|NP_634718.1| - 0.024 14.7 0.0 0.042 13.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix GcrA PF07750.11 gi|21228796|ref|NP_634718.1| - 0.028 14.8 0.0 0.037 14.4 0.0 1.2 1 0 0 1 1 1 0 GcrA cell cycle regulator HTH_28 PF13518.6 gi|21228796|ref|NP_634718.1| - 0.05 13.7 0.1 0.16 12.1 0.0 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|21228796|ref|NP_634718.1| - 0.068 13.1 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 HTH domain Sigma70_r4 PF04545.16 gi|21228796|ref|NP_634718.1| - 0.09 12.3 0.0 0.22 11.1 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_17 PF12728.7 gi|21228796|ref|NP_634718.1| - 0.11 12.7 0.0 0.26 11.5 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain RVT_N PF13655.6 gi|21228797|ref|NP_634719.1| - 4.4e-30 103.8 3.3 6.6e-30 103.2 3.3 1.3 1 0 0 1 1 1 1 N-terminal domain of reverse transcriptase RVT_1 PF00078.27 gi|21228797|ref|NP_634719.1| - 3.8e-13 49.5 0.0 6e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF5626 PF18540.1 gi|21228797|ref|NP_634719.1| - 0.051 14.1 1.2 0.069 13.7 0.6 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5626) FliD_N PF02465.18 gi|21228797|ref|NP_634719.1| - 0.075 13.7 1.4 0.15 12.8 1.2 1.5 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus DUF829 PF05705.14 gi|21228797|ref|NP_634719.1| - 0.08 12.8 0.0 0.094 12.6 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF829) DDE_Tnp_IS1 PF03400.13 gi|21228798|ref|NP_634720.1| - 6.4e-08 33.0 0.1 7.1e-08 32.9 0.1 1.0 1 0 0 1 1 1 1 IS1 transposase EPO_TPO PF00758.18 gi|21228798|ref|NP_634720.1| - 0.053 13.6 0.1 0.065 13.3 0.1 1.1 1 0 0 1 1 1 0 Erythropoietin/thrombopoietin Terminase_5 PF06056.12 gi|21228799|ref|NP_634721.1| - 1.8e-06 27.7 0.0 2.6e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_23 PF13384.6 gi|21228799|ref|NP_634721.1| - 2e-06 27.4 0.0 3.6e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 gi|21228799|ref|NP_634721.1| - 0.00038 20.5 0.0 0.00057 19.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|21228799|ref|NP_634721.1| - 0.0027 17.4 0.0 0.0068 16.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Zn_Tnp_IS1595 PF12760.7 gi|21228799|ref|NP_634721.1| - 0.0043 17.0 2.7 0.0067 16.4 2.7 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Sigma70_r4_2 PF08281.12 gi|21228799|ref|NP_634721.1| - 0.0072 16.0 0.0 0.014 15.0 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Zn_Tnp_IS1 PF03811.13 gi|21228799|ref|NP_634721.1| - 0.012 15.3 5.4 0.022 14.5 5.4 1.5 1 0 0 1 1 1 0 InsA N-terminal domain HTH_29 PF13551.6 gi|21228799|ref|NP_634721.1| - 0.013 15.5 0.0 0.03 14.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix Zn-ribbon_8 PF09723.10 gi|21228799|ref|NP_634721.1| - 0.026 14.6 2.4 1.3 9.2 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain DUF1670 PF07900.11 gi|21228799|ref|NP_634721.1| - 0.028 13.8 0.0 0.033 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) zinc-ribbons_6 PF07191.12 gi|21228799|ref|NP_634721.1| - 0.049 13.6 0.7 0.091 12.8 0.7 1.4 1 0 0 1 1 1 0 zinc-ribbons Cas6 PF09559.10 gi|21228799|ref|NP_634721.1| - 0.079 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Cas6 Crispr TnsD PF15978.5 gi|21228799|ref|NP_634721.1| - 0.1 11.6 0.1 0.21 10.6 0.1 1.6 1 1 0 1 1 1 0 Tn7-like transposition protein D HTH_Tnp_1 PF01527.20 gi|21228799|ref|NP_634721.1| - 0.1 12.9 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Transposase zf-Mss51 PF13824.6 gi|21228799|ref|NP_634721.1| - 0.12 12.5 3.1 0.34 11.1 3.1 1.8 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF2387 PF09526.10 gi|21228799|ref|NP_634721.1| - 0.12 12.5 0.3 0.25 11.5 0.3 1.5 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) Nudix_N_2 PF14803.6 gi|21228799|ref|NP_634721.1| - 0.21 11.5 3.5 0.39 10.7 3.5 1.3 1 0 0 1 1 1 0 Nudix N-terminal OrfB_Zn_ribbon PF07282.11 gi|21228799|ref|NP_634721.1| - 0.46 10.4 3.7 1.4 8.9 1.8 2.1 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-TFIIB PF13453.6 gi|21228799|ref|NP_634721.1| - 0.48 9.8 2.7 1.2 8.6 2.7 1.7 1 0 0 1 1 1 0 Transcription factor zinc-finger Rubredoxin PF00301.20 gi|21228799|ref|NP_634721.1| - 2.9 8.0 5.1 2.2 8.4 0.9 2.1 2 0 0 2 2 2 0 Rubredoxin PriA_CRR PF18319.1 gi|21228799|ref|NP_634721.1| - 4.2 7.5 7.8 4.7 7.3 2.3 2.3 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain zf-ISL3 PF14690.6 gi|21228799|ref|NP_634721.1| - 4.6 8.0 9.8 3.5 8.4 0.8 2.5 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 GIIM PF08388.11 gi|21228800|ref|NP_634722.1| - 1.5e-24 85.8 5.2 3.4e-24 84.7 5.2 1.6 1 0 0 1 1 1 1 Group II intron, maturase-specific domain RVT_1 PF00078.27 gi|21228800|ref|NP_634722.1| - 1.1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) rve PF00665.26 gi|21228801|ref|NP_634723.1| - 9.2e-10 38.8 0.0 1.6e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 gi|21228801|ref|NP_634723.1| - 1.2e-05 25.0 0.0 2.8e-05 23.8 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain HEPN-like_int PF18867.1 gi|21228801|ref|NP_634723.1| - 0.11 12.4 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 HEPN-like integron domain MbeD_MobD PF04899.12 gi|21228801|ref|NP_634723.1| - 0.17 12.0 0.1 1.2 9.3 0.1 2.2 1 1 0 1 1 1 0 MbeD/MobD like IstB_IS21 PF01695.17 gi|21228802|ref|NP_634724.1| - 1e-66 224.1 0.0 1.5e-66 223.5 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein Bac_DnaA PF00308.18 gi|21228802|ref|NP_634724.1| - 7.5e-05 22.7 0.0 0.00017 21.5 0.0 1.5 1 1 0 1 1 1 1 Bacterial dnaA protein AAA PF00004.29 gi|21228802|ref|NP_634724.1| - 0.00012 22.5 0.0 0.00026 21.4 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|21228802|ref|NP_634724.1| - 0.00022 21.5 0.1 0.00087 19.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 gi|21228802|ref|NP_634724.1| - 0.00042 20.1 0.1 0.00084 19.1 0.1 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain PhoH PF02562.16 gi|21228802|ref|NP_634724.1| - 0.00074 19.0 0.0 0.0011 18.5 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein AAA_22 PF13401.6 gi|21228802|ref|NP_634724.1| - 0.0019 18.5 0.1 0.31 11.3 0.0 2.7 1 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|21228802|ref|NP_634724.1| - 0.0043 17.4 0.0 0.019 15.3 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|21228802|ref|NP_634724.1| - 0.011 15.6 0.0 0.028 14.3 0.0 1.7 2 1 0 2 2 1 0 RsgA GTPase AAA_14 PF13173.6 gi|21228802|ref|NP_634724.1| - 0.013 15.6 0.7 0.043 13.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|21228802|ref|NP_634724.1| - 0.014 15.1 0.2 0.08 12.6 0.1 2.3 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|21228802|ref|NP_634724.1| - 0.029 14.9 2.1 0.075 13.6 0.5 2.7 2 1 0 2 2 2 0 AAA domain AAA_17 PF13207.6 gi|21228802|ref|NP_634724.1| - 0.035 14.5 0.4 0.48 10.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|21228802|ref|NP_634724.1| - 0.038 14.0 0.3 0.15 12.0 0.3 2.1 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) KTI12 PF08433.10 gi|21228802|ref|NP_634724.1| - 0.076 12.4 0.0 0.49 9.8 0.0 2.1 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_25 PF13481.6 gi|21228802|ref|NP_634724.1| - 0.082 12.5 0.0 0.2 11.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|21228802|ref|NP_634724.1| - 0.12 12.3 0.9 14 5.5 0.0 2.5 1 1 1 2 2 2 0 NTPase AAA_30 PF13604.6 gi|21228802|ref|NP_634724.1| - 0.12 12.0 0.0 0.49 10.1 0.0 1.9 1 1 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|21228802|ref|NP_634724.1| - 0.14 11.1 0.1 0.38 9.7 0.0 1.8 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_11 PF13086.6 gi|21228802|ref|NP_634724.1| - 0.21 11.4 1.4 20 4.9 0.0 3.0 2 1 1 3 3 3 0 AAA domain SEFIR PF08357.11 gi|21228803|ref|NP_634725.1| - 1.1e-08 35.5 0.0 1.7e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 SEFIR domain TIR_2 PF13676.6 gi|21228803|ref|NP_634725.1| - 1.9e-08 34.9 0.0 5.1e-08 33.5 0.0 1.8 1 0 0 1 1 1 1 TIR domain AAA_15 PF13175.6 gi|21228804|ref|NP_634726.1| - 1.4e-48 166.5 11.1 1.4e-48 166.5 11.1 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 gi|21228804|ref|NP_634726.1| - 7.1e-16 58.9 8.3 4.2e-10 39.9 0.8 3.7 3 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF2813 PF11398.8 gi|21228804|ref|NP_634726.1| - 1.3e-09 37.8 0.0 2.2e-06 27.2 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF2813) SMC_N PF02463.19 gi|21228804|ref|NP_634726.1| - 6.8e-05 22.4 0.0 0.0029 17.1 0.0 2.5 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|21228804|ref|NP_634726.1| - 0.0001 22.9 7.1 0.0001 22.9 7.1 3.1 2 2 0 2 2 2 1 AAA domain AAA_27 PF13514.6 gi|21228804|ref|NP_634726.1| - 0.014 15.0 0.0 0.026 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|21228804|ref|NP_634726.1| - 0.019 14.7 0.0 0.043 13.6 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|21228804|ref|NP_634726.1| - 0.044 13.9 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase Methylase_S PF01420.19 gi|21228805|ref|NP_634727.1| - 9.8e-38 130.0 0.0 1.1e-17 64.7 0.0 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.16 gi|21228806|ref|NP_634728.1| - 1.8e-65 221.3 0.0 2.4e-65 220.9 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|21228806|ref|NP_634728.1| - 7.6e-15 55.7 0.0 4.7e-13 49.9 0.0 2.6 1 1 0 1 1 1 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|21228806|ref|NP_634728.1| - 6.9e-08 32.4 0.0 1.5e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|21228806|ref|NP_634728.1| - 0.0002 20.9 0.0 0.00085 18.9 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|21228806|ref|NP_634728.1| - 0.0012 18.6 0.0 0.016 15.0 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|21228806|ref|NP_634728.1| - 0.028 14.3 0.0 0.25 11.2 0.0 2.3 1 1 0 1 1 1 0 Methyltransferase domain T4SS_TraI PF16932.5 gi|21228806|ref|NP_634728.1| - 0.055 12.6 0.0 0.097 11.8 0.0 1.3 1 0 0 1 1 1 0 Type IV secretory system, conjugal DNA-protein transfer EcoEI_R_C PF08463.10 gi|21228807|ref|NP_634729.1| - 7.2e-34 117.3 2.0 7.2e-34 117.3 2.0 1.9 2 0 0 2 2 2 1 EcoEI R protein C-terminal ResIII PF04851.15 gi|21228807|ref|NP_634729.1| - 2e-32 112.6 0.1 1e-31 110.3 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 gi|21228807|ref|NP_634729.1| - 2.3e-14 53.6 0.9 1.7e-13 50.8 0.0 2.7 2 1 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|21228807|ref|NP_634729.1| - 5.9e-13 49.2 0.0 9.9e-10 38.7 0.0 2.9 1 1 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.29 gi|21228807|ref|NP_634729.1| - 8.3e-08 32.2 0.0 5.2e-07 29.6 0.0 2.3 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|21228807|ref|NP_634729.1| - 1.5e-05 25.3 0.1 6.4e-05 23.3 0.1 2.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UvrD-helicase PF00580.21 gi|21228807|ref|NP_634729.1| - 0.00024 20.8 0.1 0.00024 20.8 0.1 2.5 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain T2SSE PF00437.20 gi|21228807|ref|NP_634729.1| - 0.016 14.3 0.3 0.037 13.1 0.0 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_19 PF13245.6 gi|21228807|ref|NP_634729.1| - 0.022 15.1 0.0 0.048 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF853 PF05872.12 gi|21228807|ref|NP_634729.1| - 0.032 12.8 0.0 0.065 11.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) AAA_11 PF13086.6 gi|21228807|ref|NP_634729.1| - 0.94 9.2 0.0 0.94 9.2 0.0 2.5 4 0 0 4 4 4 0 AAA domain Phage_GP20 PF06810.11 gi|21228807|ref|NP_634729.1| - 8.1 6.2 8.2 12 5.7 1.0 2.3 2 0 0 2 2 2 0 Phage minor structural protein GP20 Phasin PF05597.11 gi|21228808|ref|NP_634730.1| - 8.4e-08 32.3 5.5 7.6e-06 25.9 5.5 2.0 1 1 0 1 1 1 1 Poly(hydroxyalcanoate) granule associated protein (phasin) GatB_Yqey PF02637.18 gi|21228808|ref|NP_634730.1| - 0.01 15.7 1.8 0.012 15.5 1.8 1.2 1 0 0 1 1 1 0 GatB domain Lzipper-MIP1 PF14389.6 gi|21228808|ref|NP_634730.1| - 0.011 16.0 1.8 0.02 15.2 1.8 1.4 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 DUF883 PF05957.13 gi|21228808|ref|NP_634730.1| - 0.011 16.3 1.5 0.011 16.3 1.5 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) TipAS PF07739.13 gi|21228808|ref|NP_634730.1| - 0.045 14.3 3.2 3.2 8.3 0.1 2.1 1 1 1 2 2 2 0 TipAS antibiotic-recognition domain HSBP1 PF06825.12 gi|21228808|ref|NP_634730.1| - 0.072 12.9 4.4 2.2 8.2 0.3 2.6 2 0 0 2 2 2 0 Heat shock factor binding protein 1 PqqD PF05402.12 gi|21228808|ref|NP_634730.1| - 0.082 13.2 0.6 0.14 12.5 0.1 1.7 2 1 0 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) BMFP PF04380.13 gi|21228808|ref|NP_634730.1| - 0.13 12.7 8.5 0.16 12.5 6.2 2.1 2 1 0 2 2 2 0 Membrane fusogenic activity Fib_alpha PF08702.10 gi|21228808|ref|NP_634730.1| - 0.86 9.8 4.9 3 8.0 0.5 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family YtxH PF12732.7 gi|21228808|ref|NP_634730.1| - 0.97 10.0 8.0 5.6 7.6 8.0 2.1 1 1 0 1 1 1 0 YtxH-like protein DivIC PF04977.15 gi|21228808|ref|NP_634730.1| - 4.7 7.0 8.0 2 8.2 0.3 2.5 2 1 0 2 2 2 0 Septum formation initiator Fusion_gly PF00523.18 gi|21228810|ref|NP_634732.1| - 0.012 13.9 0.6 0.012 13.9 0.6 1.5 2 0 0 2 2 2 0 Fusion glycoprotein F0 LIF_OSM PF01291.17 gi|21228810|ref|NP_634732.1| - 0.019 15.1 1.2 1.4 9.0 0.2 3.1 1 1 0 2 2 2 0 LIF / OSM family HisKA_3 PF07730.13 gi|21228810|ref|NP_634732.1| - 0.038 14.5 1.3 1.9 9.1 0.1 2.8 2 0 0 2 2 2 0 Histidine kinase DUF948 PF06103.11 gi|21228810|ref|NP_634732.1| - 0.051 13.8 7.1 1.8 8.9 0.5 3.2 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) Peptidase_S46 PF10459.9 gi|21228810|ref|NP_634732.1| - 0.056 12.1 19.9 0.025 13.2 17.8 1.5 1 1 0 1 1 1 0 Peptidase S46 DUF3391 PF11871.8 gi|21228810|ref|NP_634732.1| - 0.058 13.9 11.5 0.34 11.4 0.9 2.8 2 2 1 3 3 3 0 Domain of unknown function (DUF3391) Laminin_II PF06009.12 gi|21228810|ref|NP_634732.1| - 0.098 12.7 21.5 1.4 8.9 6.3 3.4 1 1 2 3 3 3 0 Laminin Domain II LIAS_N PF16881.5 gi|21228810|ref|NP_634732.1| - 0.1 13.0 7.8 0.25 11.8 0.6 3.2 1 1 1 3 3 3 0 N-terminal domain of lipoyl synthase of Radical_SAM family ATP-synt_G PF04718.15 gi|21228810|ref|NP_634732.1| - 0.56 11.1 3.0 1.6 9.6 0.3 2.4 2 1 0 2 2 2 0 Mitochondrial ATP synthase g subunit Synaptonemal_3 PF15191.6 gi|21228810|ref|NP_634732.1| - 0.57 10.0 5.7 0.34 10.7 0.4 3.1 2 2 1 3 3 3 0 Synaptonemal complex central element protein 3 TMP_2 PF06791.13 gi|21228810|ref|NP_634732.1| - 0.7 9.5 3.3 0.5 10.0 1.0 1.8 1 1 0 1 1 1 0 Prophage tail length tape measure protein DUF4200 PF13863.6 gi|21228810|ref|NP_634732.1| - 2 8.8 32.7 0.031 14.7 12.0 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) Cytochrom_B562 PF07361.11 gi|21228810|ref|NP_634732.1| - 3.9 8.2 15.4 0.099 13.3 1.1 3.4 1 1 2 3 3 3 0 Cytochrome b562 Osmo_CC PF08946.10 gi|21228810|ref|NP_634732.1| - 7.1 7.0 10.3 20 5.5 1.6 3.4 3 0 0 3 3 3 0 Osmosensory transporter coiled coil NPV_P10 PF05531.12 gi|21228810|ref|NP_634732.1| - 7.8 7.0 10.5 14 6.2 0.5 4.1 2 2 1 4 4 4 0 Nucleopolyhedrovirus P10 protein Cas_Cas1 PF01867.16 gi|21228810|ref|NP_634732.1| - 8.8 5.4 15.0 0.23 10.5 4.2 2.3 1 1 0 2 2 2 0 CRISPR associated protein Cas1 PilJ PF13675.6 gi|21228812|ref|NP_634734.1| - 0.044 13.8 1.6 1.3 9.1 0.1 2.5 2 0 0 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term DUF2353 PF09789.9 gi|21228812|ref|NP_634734.1| - 0.27 10.6 17.2 0.07 12.5 7.3 2.3 1 1 0 2 2 2 0 Uncharacterized coiled-coil protein (DUF2353) TFIIE_beta PF02186.15 gi|21228812|ref|NP_634734.1| - 1.9 8.9 5.2 0.98 9.8 0.3 3.0 3 1 1 4 4 4 0 TFIIE beta subunit core domain DUF4834 PF16118.5 gi|21228812|ref|NP_634734.1| - 8.9 7.4 11.1 0.16 12.9 1.7 2.7 2 2 0 3 3 3 0 Domain of unknown function (DUF4834) HTH_24 PF13412.6 gi|21228813|ref|NP_634735.1| - 0.00063 19.3 0.4 0.0012 18.3 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|21228813|ref|NP_634735.1| - 0.0019 18.1 0.1 0.0039 17.1 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|21228813|ref|NP_634735.1| - 0.0031 17.5 0.2 0.0067 16.4 0.2 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|21228813|ref|NP_634735.1| - 0.0039 17.1 0.0 0.0087 15.9 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|21228813|ref|NP_634735.1| - 0.0095 15.7 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|21228813|ref|NP_634735.1| - 0.017 15.0 0.0 0.03 14.2 0.0 1.4 1 0 0 1 1 1 0 MarR family CarboxypepD_reg PF13620.6 gi|21228813|ref|NP_634735.1| - 0.023 15.0 0.1 0.064 13.5 0.0 1.7 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain Penicillinase_R PF03965.16 gi|21228813|ref|NP_634735.1| - 0.026 14.9 0.0 0.058 13.8 0.0 1.5 1 0 0 1 1 1 0 Penicillinase repressor HTH_27 PF13463.6 gi|21228813|ref|NP_634735.1| - 0.11 13.0 0.0 0.24 11.9 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain ETRAMP PF09716.10 gi|21228813|ref|NP_634735.1| - 0.16 12.1 0.3 8.3 6.5 0.0 2.4 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) ACT PF01842.25 gi|21228814|ref|NP_634736.1| - 0.0096 15.7 1.3 2 8.2 0.0 2.8 3 0 0 3 3 3 2 ACT domain Sigma70_r1_1 PF03979.14 gi|21228814|ref|NP_634736.1| - 0.033 14.2 0.0 0.077 13.1 0.0 1.6 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 DUF2007 PF09413.10 gi|21228814|ref|NP_634736.1| - 0.067 13.4 0.1 2.3 8.4 0.1 2.3 2 0 0 2 2 2 0 Putative prokaryotic signal transducing protein Homoserine_dh PF00742.19 gi|21228815|ref|NP_634737.1| - 4.4e-56 189.5 0.1 7e-56 188.8 0.1 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|21228815|ref|NP_634737.1| - 1e-09 39.0 0.1 1.9e-09 38.2 0.1 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|21228815|ref|NP_634737.1| - 9.3e-05 22.3 0.1 0.00019 21.3 0.1 1.6 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|21228815|ref|NP_634737.1| - 0.0046 17.2 0.2 0.009 16.3 0.2 1.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DNA_ligase_A_M PF01068.21 gi|21228816|ref|NP_634738.1| - 3.5e-57 193.3 0.2 5.6e-57 192.7 0.2 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|21228816|ref|NP_634738.1| - 8.6e-33 114.1 0.1 3.2e-32 112.3 0.1 2.0 1 1 1 2 2 2 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|21228816|ref|NP_634738.1| - 2.4e-20 72.9 0.0 7.5e-20 71.4 0.0 1.9 1 1 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|21228816|ref|NP_634738.1| - 1.5e-07 31.9 0.1 2.5e-07 31.1 0.1 1.4 1 0 0 1 1 1 1 RNA ligase mRNA_cap_enzyme PF01331.19 gi|21228816|ref|NP_634738.1| - 0.0027 17.6 0.0 1.6 8.5 0.0 2.3 2 0 0 2 2 2 2 mRNA capping enzyme, catalytic domain TraC PF07820.12 gi|21228816|ref|NP_634738.1| - 0.094 13.1 1.0 1.3 9.4 0.1 3.1 3 1 0 3 3 3 0 TraC-like protein VP40 PF07447.12 gi|21228816|ref|NP_634738.1| - 0.19 10.8 0.0 0.34 10.0 0.0 1.3 1 0 0 1 1 1 0 Matrix protein VP40 MMR_HSR1 PF01926.23 gi|21228817|ref|NP_634739.1| - 7.6e-18 64.7 0.0 1e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|21228817|ref|NP_634739.1| - 3.4e-11 42.9 0.1 1.2e-09 37.9 0.1 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B Septin PF00735.18 gi|21228817|ref|NP_634739.1| - 0.00025 20.4 0.0 0.00049 19.5 0.0 1.5 1 1 0 1 1 1 1 Septin RsgA_GTPase PF03193.16 gi|21228817|ref|NP_634739.1| - 0.00045 20.2 0.4 0.04 13.8 0.2 2.7 2 1 0 2 2 2 1 RsgA GTPase GTP_EFTU PF00009.27 gi|21228817|ref|NP_634739.1| - 0.0057 16.2 0.0 0.075 12.6 0.0 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 gi|21228817|ref|NP_634739.1| - 0.0086 16.1 0.2 0.031 14.3 0.2 1.8 1 1 0 1 1 1 1 Dynamin family AAA_18 PF13238.6 gi|21228817|ref|NP_634739.1| - 0.11 13.1 0.0 0.18 12.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain Roc PF08477.13 gi|21228817|ref|NP_634739.1| - 0.15 12.3 0.1 0.36 11.1 0.0 1.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase DHHA1 PF02272.19 gi|21228818|ref|NP_634740.1| - 1e-16 61.6 0.1 3e-16 60.1 0.1 1.8 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|21228818|ref|NP_634740.1| - 7.1e-05 23.0 0.0 0.00012 22.2 0.0 1.4 1 0 0 1 1 1 1 DHH family DUF11 PF01345.18 gi|21228819|ref|NP_634741.1| - 1.6e-21 76.4 8.4 2.1e-14 53.5 1.0 3.5 3 0 0 3 3 3 3 Domain of unknown function DUF11 BatD PF13584.6 gi|21228819|ref|NP_634741.1| - 2.7e-11 43.0 5.6 1e-07 31.1 0.6 2.7 3 0 0 3 3 3 2 Oxygen tolerance CARDB PF07705.11 gi|21228819|ref|NP_634741.1| - 9.6e-09 35.4 9.8 0.007 16.6 0.1 3.5 3 0 0 3 3 3 3 CARDB bMG10 PF17973.1 gi|21228819|ref|NP_634741.1| - 1.1e-06 28.8 5.6 2.6 8.2 0.2 5.3 3 2 2 5 5 5 2 Bacterial Alpha-2-macroglobulin MG10 domain TRAP_beta PF05753.14 gi|21228819|ref|NP_634741.1| - 5.1e-06 26.0 7.6 0.02 14.3 0.2 3.2 2 1 1 3 3 3 2 Translocon-associated protein beta (TRAPB) DUF2393 PF09624.10 gi|21228819|ref|NP_634741.1| - 0.0011 18.9 5.4 0.25 11.3 0.1 3.4 3 0 0 3 3 3 2 Protein of unknown function (DUF2393) DUF1616 PF07760.11 gi|21228819|ref|NP_634741.1| - 0.0089 15.4 4.6 0.2 11.0 0.5 2.5 2 1 1 3 3 3 2 Protein of unknown function (DUF1616) Top6b_C PF18000.1 gi|21228819|ref|NP_634741.1| - 0.02 15.0 8.9 0.035 14.3 0.3 4.5 4 1 0 4 4 4 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain NPCBM_assoc PF10633.9 gi|21228819|ref|NP_634741.1| - 0.25 11.6 3.7 17 5.7 0.1 3.5 3 1 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase Glyco_hydro_2 PF00703.21 gi|21228819|ref|NP_634741.1| - 0.58 10.9 7.8 1.7 9.4 0.2 3.5 2 1 1 3 3 3 0 Glycosyl hydrolases family 2 PGF-CTERM PF18204.1 gi|21228819|ref|NP_634741.1| - 0.79 9.8 5.6 0.07 13.1 0.8 1.8 2 0 0 2 2 2 0 PGF-CTERM motif fn3_5 PF06280.12 gi|21228819|ref|NP_634741.1| - 5.7 7.7 9.3 0.63 10.7 3.3 2.5 2 2 0 2 2 2 0 Fn3-like domain NIF3 PF01784.18 gi|21228820|ref|NP_634742.1| - 1.5e-53 182.0 0.1 1.9e-53 181.6 0.1 1.1 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) HD PF01966.22 gi|21228821|ref|NP_634743.1| - 3.4e-05 24.1 0.5 6.1e-05 23.2 0.5 1.5 1 1 0 1 1 1 1 HD domain TPR_1 PF00515.28 gi|21228822|ref|NP_634744.1| - 1e-165 531.6 83.5 3.4e-10 39.3 0.1 25.7 26 0 0 26 26 26 23 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21228822|ref|NP_634744.1| - 1.2e-142 452.9 74.2 4.6e-08 32.6 0.1 25.5 26 0 0 26 26 26 23 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21228822|ref|NP_634744.1| - 8.4e-118 375.0 94.1 1.3e-08 34.3 0.1 24.8 26 0 0 26 26 24 21 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21228822|ref|NP_634744.1| - 1e-110 361.2 92.6 1.6e-08 34.0 0.3 23.9 13 7 13 26 26 24 21 TPR repeat TPR_16 PF13432.6 gi|21228822|ref|NP_634744.1| - 8.8e-96 314.3 6.6 4.5e-08 33.6 0.0 15.7 8 4 9 17 17 17 16 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21228822|ref|NP_634744.1| - 3e-83 268.4 64.8 2.4e-05 24.4 0.0 25.3 24 1 1 25 25 25 17 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21228822|ref|NP_634744.1| - 3.8e-81 260.8 18.5 3.8e-05 24.1 0.1 22.0 7 6 15 22 22 21 16 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21228822|ref|NP_634744.1| - 5.8e-77 253.8 4.3 3.2e-07 30.4 0.0 13.3 6 2 7 15 15 15 12 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21228822|ref|NP_634744.1| - 1.5e-64 214.3 54.8 2.7e-08 34.0 0.1 17.9 6 4 12 19 19 19 18 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21228822|ref|NP_634744.1| - 1.2e-57 192.3 36.3 7.2e-07 29.6 0.2 15.4 8 5 11 19 19 19 14 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21228822|ref|NP_634744.1| - 7.3e-52 169.7 51.4 0.014 15.3 0.0 22.4 21 2 2 23 23 22 13 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21228822|ref|NP_634744.1| - 1.6e-37 125.7 42.4 0.011 16.3 0.1 22.1 23 0 0 23 23 22 7 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21228822|ref|NP_634744.1| - 1.4e-36 124.6 47.9 1.1e-05 25.5 0.7 11.3 5 3 7 12 12 12 11 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 gi|21228822|ref|NP_634744.1| - 3.7e-25 88.8 19.3 0.00049 19.1 0.0 10.3 2 2 7 11 11 11 7 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.6 gi|21228822|ref|NP_634744.1| - 1.4e-22 79.5 39.9 0.027 14.5 0.0 17.3 17 3 2 19 19 17 5 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|21228822|ref|NP_634744.1| - 1.6e-17 62.7 37.5 0.45 10.5 0.1 19.1 22 0 0 22 22 20 1 Tetratricopeptide repeat DUF3856 PF12968.7 gi|21228822|ref|NP_634744.1| - 2e-17 63.6 18.5 0.098 12.7 0.2 13.7 7 4 3 12 12 12 3 Domain of Unknown Function (DUF3856) MIT PF04212.18 gi|21228822|ref|NP_634744.1| - 5.5e-16 58.4 69.7 0.064 13.3 0.0 19.4 21 1 1 22 22 22 4 MIT (microtubule interacting and transport) domain BTAD PF03704.17 gi|21228822|ref|NP_634744.1| - 8.3e-14 52.2 23.1 0.0019 18.6 0.2 10.0 4 2 8 12 12 12 5 Bacterial transcriptional activator domain TPR_15 PF13429.6 gi|21228822|ref|NP_634744.1| - 1.8e-11 43.8 19.5 2e-05 23.9 1.5 8.5 3 3 7 10 10 10 5 Tetratricopeptide repeat TPR_5 PF12688.7 gi|21228822|ref|NP_634744.1| - 4.5e-10 39.8 10.3 1.9e-06 28.1 0.1 8.3 7 2 2 9 9 9 1 Tetratrico peptide repeat ChAPs PF09295.10 gi|21228822|ref|NP_634744.1| - 1.6e-06 27.4 4.5 0.043 12.8 0.1 5.3 4 2 0 5 5 5 2 ChAPs (Chs5p-Arf1p-binding proteins) SRP_TPR_like PF17004.5 gi|21228822|ref|NP_634744.1| - 1.6e-06 28.1 27.8 0.19 11.8 1.2 9.6 5 4 4 9 9 9 1 Putative TPR-like repeat FAT PF02259.23 gi|21228822|ref|NP_634744.1| - 9.4e-06 25.1 20.4 0.34 10.1 0.1 7.9 4 4 3 8 8 8 1 FAT domain NRBF2_MIT PF17169.4 gi|21228822|ref|NP_634744.1| - 1.7e-05 24.9 20.0 26 5.1 0.1 12.4 12 4 4 16 16 13 0 MIT domain of nuclear receptor-binding factor 2 Alkyl_sulf_dimr PF14863.6 gi|21228822|ref|NP_634744.1| - 2.7e-05 24.6 11.6 3.8 8.0 0.0 8.2 5 3 3 9 9 8 1 Alkyl sulfatase dimerisation TPR_4 PF07721.14 gi|21228822|ref|NP_634744.1| - 0.00031 21.1 17.2 3.1 8.7 1.3 8.6 9 0 0 9 9 7 1 Tetratricopeptide repeat PPR PF01535.20 gi|21228822|ref|NP_634744.1| - 0.0041 17.3 21.2 21 5.6 0.1 12.4 16 0 0 16 16 13 0 PPR repeat RPN6_N PF18055.1 gi|21228822|ref|NP_634744.1| - 0.014 15.8 2.7 7.3 7.0 0.0 4.8 4 1 1 5 5 4 0 26S proteasome regulatory subunit RPN6 N-terminal domain Rapsyn_N PF10579.9 gi|21228822|ref|NP_634744.1| - 0.024 14.7 2.1 3.5 7.8 0.1 5.1 6 1 1 7 7 5 0 Rapsyn N-terminal myristoylation and linker region Coatomer_E PF04733.14 gi|21228822|ref|NP_634744.1| - 0.027 13.9 10.5 8.8 5.6 0.1 5.4 3 2 3 6 6 6 0 Coatomer epsilon subunit TPR_3 PF07720.12 gi|21228822|ref|NP_634744.1| - 0.04 13.9 40.0 14 5.8 0.0 13.7 16 0 0 16 16 14 0 Tetratricopeptide repeat PknG_TPR PF16918.5 gi|21228822|ref|NP_634744.1| - 0.16 10.7 4.5 47 2.5 0.1 4.6 4 1 1 5 5 4 0 Protein kinase G tetratricopeptide repeat DUF627 PF04781.12 gi|21228822|ref|NP_634744.1| - 0.18 11.9 7.4 4.3 7.4 0.1 6.0 9 0 0 9 9 5 0 Protein of unknown function (DUF627) Aida_N PF08910.10 gi|21228822|ref|NP_634744.1| - 9.3 6.7 7.4 76 3.8 0.1 5.4 6 1 1 7 7 3 0 Aida N-terminus dCMP_cyt_deam_1 PF00383.23 gi|21228824|ref|NP_634746.1| - 6.4e-25 87.0 0.0 8.3e-25 86.6 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|21228824|ref|NP_634746.1| - 1.4e-21 76.7 0.0 1.5e-21 76.6 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC3 PF18771.1 gi|21228824|ref|NP_634746.1| - 0.0047 17.0 0.0 0.0072 16.4 0.0 1.2 1 0 0 1 1 1 1 APOBEC3 SNAD4 PF18750.1 gi|21228824|ref|NP_634746.1| - 0.013 15.6 0.0 0.021 15.0 0.0 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 DUF3663 PF12404.8 gi|21228824|ref|NP_634746.1| - 0.069 13.2 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Peptidase APOBEC2 PF18772.1 gi|21228824|ref|NP_634746.1| - 0.09 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 APOBEC2 PPDK_N PF01326.19 gi|21228825|ref|NP_634747.1| - 1.7e-113 379.2 0.0 2.4e-113 378.7 0.0 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|21228825|ref|NP_634747.1| - 2.1e-60 204.3 0.1 3.6e-60 203.6 0.1 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|21228825|ref|NP_634747.1| - 1.7e-25 88.5 0.4 5.1e-25 87.0 0.4 1.9 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain TF_Zn_Ribbon PF08271.12 gi|21228826|ref|NP_634748.1| - 0.0011 18.4 1.0 0.0016 17.9 1.0 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding DZR PF12773.7 gi|21228826|ref|NP_634748.1| - 0.021 14.8 2.6 0.12 12.4 2.9 1.7 1 1 0 1 1 1 0 Double zinc ribbon DNA_ligase_ZBD PF03119.16 gi|21228826|ref|NP_634748.1| - 0.024 14.7 2.3 0.031 14.3 0.1 2.0 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zinc_ribbon_2 PF13240.6 gi|21228826|ref|NP_634748.1| - 0.05 13.3 6.0 0.69 9.7 0.5 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.8 gi|21228826|ref|NP_634748.1| - 0.053 13.4 3.2 3.3 7.7 0.5 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) OrfB_Zn_ribbon PF07282.11 gi|21228826|ref|NP_634748.1| - 0.056 13.4 1.1 0.072 13.0 1.1 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain RecR PF02132.15 gi|21228826|ref|NP_634748.1| - 0.081 12.5 2.7 0.88 9.2 0.1 2.1 1 1 1 2 2 2 0 RecR protein zinc_ribbon_15 PF17032.5 gi|21228826|ref|NP_634748.1| - 0.098 13.4 2.2 0.13 13.0 2.2 1.2 1 0 0 1 1 1 0 zinc-ribbon family UPF0547 PF10571.9 gi|21228826|ref|NP_634748.1| - 0.16 12.1 5.8 0.21 11.7 0.5 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Zn-ribbon_8 PF09723.10 gi|21228826|ref|NP_634748.1| - 0.41 10.8 4.0 0.74 10.0 0.4 2.1 1 1 0 1 1 1 0 Zinc ribbon domain Y1_Tnp PF01797.16 gi|21228827|ref|NP_634749.1| - 4.2e-22 78.5 0.1 5.2e-22 78.2 0.1 1.0 1 0 0 1 1 1 1 Transposase IS200 like Lipid_DES PF08557.10 gi|21228827|ref|NP_634749.1| - 0.046 13.2 0.0 0.097 12.2 0.0 1.5 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) NinG PF05766.12 gi|21228828|ref|NP_634750.1| - 0.018 15.0 5.2 0.025 14.5 5.2 1.2 1 0 0 1 1 1 0 Bacteriophage Lambda NinG protein zf-C2H2_6 PF13912.6 gi|21228828|ref|NP_634750.1| - 0.041 13.9 0.3 0.09 12.8 0.3 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger Peptidase_C39_2 PF13529.6 gi|21228829|ref|NP_634751.1| - 1.7e-07 31.9 0.6 1.7e-07 31.9 0.6 2.8 2 2 1 3 3 3 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|21228829|ref|NP_634751.1| - 0.033 14.2 0.0 0.092 12.7 0.0 1.7 1 0 0 1 1 1 0 Papain-like cysteine protease AvrRpt2 DNA_pol_lambd_f PF10391.9 gi|21228829|ref|NP_634751.1| - 0.13 12.1 0.0 0.37 10.7 0.0 1.8 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda Lactonase PF10282.9 gi|21228830|ref|NP_634752.1| - 8.2e-16 58.2 5.5 3.1e-06 26.7 0.1 3.9 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|21228830|ref|NP_634752.1| - 9.1e-16 57.3 11.4 1.3e-06 27.2 0.3 3.8 2 2 2 4 4 4 4 Cytochrome D1 heme domain SGL PF08450.12 gi|21228830|ref|NP_634752.1| - 3.3e-12 46.5 9.5 0.0004 20.1 0.9 4.1 1 1 3 4 4 4 3 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|21228830|ref|NP_634752.1| - 8.4e-10 38.2 7.5 0.019 15.0 0.3 5.4 4 1 1 5 5 5 3 NHL repeat PD40 PF07676.12 gi|21228830|ref|NP_634752.1| - 9.9e-10 38.1 0.2 0.91 9.5 0.0 5.9 6 0 0 6 6 6 1 WD40-like Beta Propeller Repeat Str_synth PF03088.16 gi|21228830|ref|NP_634752.1| - 7.8e-08 32.3 0.2 4.8 7.4 0.0 5.1 2 1 3 5 5 5 2 Strictosidine synthase Arylesterase PF01731.20 gi|21228830|ref|NP_634752.1| - 3e-06 27.3 11.1 0.57 10.4 0.1 5.4 3 2 2 5 5 5 2 Arylesterase DPPIV_N PF00930.21 gi|21228830|ref|NP_634752.1| - 0.00015 20.7 0.2 0.0067 15.2 0.2 2.8 3 0 0 3 3 3 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region ANAPC4_WD40 PF12894.7 gi|21228830|ref|NP_634752.1| - 0.00075 19.7 3.9 6.3 7.2 0.0 4.6 3 2 3 6 6 5 1 Anaphase-promoting complex subunit 4 WD40 domain DUF1513 PF07433.11 gi|21228830|ref|NP_634752.1| - 0.00094 18.4 1.2 0.091 11.8 0.1 3.4 2 1 2 4 4 4 1 Protein of unknown function (DUF1513) SBP56 PF05694.11 gi|21228830|ref|NP_634752.1| - 0.00098 18.0 0.2 6.7 5.4 0.0 4.2 1 1 2 4 4 4 1 56kDa selenium binding protein (SBP56) Me-amine-dh_H PF06433.11 gi|21228830|ref|NP_634752.1| - 0.0021 17.0 14.0 0.081 11.8 2.9 3.7 1 1 3 4 4 4 4 Methylamine dehydrogenase heavy chain (MADH) Arm-DNA-bind_3 PF13356.6 gi|21228830|ref|NP_634752.1| - 0.0025 18.1 0.0 24 5.4 0.0 4.6 1 1 2 3 3 3 0 Arm DNA-binding domain P_proprotein PF01483.20 gi|21228830|ref|NP_634752.1| - 0.0033 17.4 0.1 12 6.0 0.0 4.7 4 1 1 5 5 5 0 Proprotein convertase P-domain MMPL PF03176.15 gi|21228830|ref|NP_634752.1| - 0.0064 15.5 6.1 0.013 14.4 1.2 2.7 1 1 2 3 3 3 1 MMPL family DUF839 PF05787.13 gi|21228830|ref|NP_634752.1| - 0.012 14.8 5.8 0.13 11.4 5.8 2.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF839) PBCV_basic_adap PF08789.10 gi|21228830|ref|NP_634752.1| - 0.87 9.8 8.6 76 3.6 0.1 4.6 5 0 0 5 5 5 0 PBCV-specific basic adaptor domain Y1_Tnp PF01797.16 gi|21228831|ref|NP_634753.1| - 3.3e-19 69.2 0.1 3.6e-19 69.0 0.1 1.0 1 0 0 1 1 1 1 Transposase IS200 like AlbA_2 PF04326.14 gi|21228832|ref|NP_634754.1| - 1.4e-20 73.8 0.0 2.4e-20 73.1 0.0 1.4 1 0 0 1 1 1 1 Putative DNA-binding domain MarC PF01914.17 gi|21228833|ref|NP_634755.1| - 4.7e-56 189.4 17.7 5.2e-56 189.2 17.7 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein TerC PF03741.16 gi|21228833|ref|NP_634755.1| - 8.5e-07 28.8 12.8 2e-06 27.6 12.7 1.6 1 1 0 1 1 1 1 Integral membrane protein TerC family LysE PF01810.18 gi|21228833|ref|NP_634755.1| - 0.0004 19.9 11.5 0.0028 17.2 11.5 2.0 1 1 0 1 1 1 1 LysE type translocator CobD_Cbib PF03186.13 gi|21228833|ref|NP_634755.1| - 0.05 12.8 0.3 0.05 12.8 0.3 2.1 2 0 0 2 2 2 0 CobD/Cbib protein COX2_TM PF02790.15 gi|21228833|ref|NP_634755.1| - 0.37 11.0 8.3 0.44 10.7 1.1 3.1 3 0 0 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane domain DUF805 PF05656.14 gi|21228833|ref|NP_634755.1| - 5.2 7.5 11.6 0.36 11.3 2.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF805) SWI2_SNF2 PF18766.1 gi|21228835|ref|NP_634757.1| - 6.6e-73 245.1 0.1 6.6e-73 245.1 0.1 2.5 3 0 0 3 3 3 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|21228835|ref|NP_634757.1| - 8.9e-46 156.3 0.8 8.9e-46 156.3 0.8 3.5 5 1 1 6 6 6 1 Type I restriction enzyme R protein N terminus (HSDR_N) DUF3387 PF11867.8 gi|21228835|ref|NP_634757.1| - 5.4e-36 124.6 20.2 5.4e-36 124.6 20.2 3.1 3 0 0 3 3 3 1 Domain of unknown function (DUF3387) ResIII PF04851.15 gi|21228835|ref|NP_634757.1| - 2.2e-20 73.4 3.5 3.4e-20 72.7 0.1 3.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|21228835|ref|NP_634757.1| - 0.002 17.9 1.0 0.041 13.7 0.0 3.1 3 0 0 3 3 3 1 DEAD/DEAH box helicase Glycos_transf_3 PF00591.21 gi|21228835|ref|NP_634757.1| - 0.014 15.0 0.1 1.6 8.3 0.0 2.3 2 0 0 2 2 2 0 Glycosyl transferase family, a/b domain TIR-like PF10137.9 gi|21228835|ref|NP_634757.1| - 0.14 12.1 1.8 1.4 8.9 0.2 3.1 3 0 0 3 3 3 0 Predicted nucleotide-binding protein containing TIR-like domain FTO_CTD PF12934.7 gi|21228835|ref|NP_634757.1| - 0.84 9.4 7.7 1.2 8.8 0.3 3.4 3 0 0 3 3 3 0 FTO C-terminal domain KIP1 PF07765.12 gi|21228839|ref|NP_634761.1| - 0.034 14.3 2.4 2.1 8.5 0.3 2.5 2 0 0 2 2 2 0 KIP1-like protein Methylase_S PF01420.19 gi|21228841|ref|NP_634763.1| - 9.3e-27 94.3 2.7 1.7e-22 80.4 0.3 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.16 gi|21228842|ref|NP_634764.1| - 5.4e-95 318.3 0.0 6.9e-95 317.9 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|21228842|ref|NP_634764.1| - 4.5e-20 72.7 0.6 4.5e-20 72.7 0.6 2.0 2 0 0 2 2 2 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|21228842|ref|NP_634764.1| - 8e-07 28.9 0.0 1.6e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|21228842|ref|NP_634764.1| - 3e-06 26.9 0.0 6.3e-06 25.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Prefoldin PF02996.17 gi|21228842|ref|NP_634764.1| - 0.012 15.5 0.7 1.8 8.5 0.0 2.7 2 0 0 2 2 2 0 Prefoldin subunit Methyltransf_15 PF09445.10 gi|21228842|ref|NP_634764.1| - 0.024 14.2 0.3 0.21 11.1 0.1 2.2 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase Methyltransf_31 PF13847.6 gi|21228842|ref|NP_634764.1| - 0.027 14.3 0.0 0.051 13.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain PEGA PF08308.11 gi|21228844|ref|NP_634766.1| - 9.9e-29 99.0 0.0 6.5e-13 48.4 0.0 3.0 2 0 0 2 2 2 2 PEGA domain DUF5050 PF16472.5 gi|21228844|ref|NP_634766.1| - 1e-06 28.2 39.5 8.5e-06 25.2 15.6 3.6 2 1 2 4 4 4 3 Domain of unknown function (DUF5050) DPPIV_N PF00930.21 gi|21228844|ref|NP_634766.1| - 2.8e-05 23.0 25.3 0.42 9.3 2.1 6.4 1 1 6 7 7 7 6 Dipeptidyl peptidase IV (DPP IV) N-terminal region Kelch_3 PF13415.6 gi|21228844|ref|NP_634766.1| - 0.0034 17.6 12.7 33 4.9 0.0 6.9 7 0 0 7 7 7 1 Galactose oxidase, central domain Plug PF07715.15 gi|21228844|ref|NP_634766.1| - 0.5 11.0 4.4 7.6 7.2 1.1 3.7 3 1 0 3 3 3 0 TonB-dependent Receptor Plug Domain NUDIX PF00293.28 gi|21228845|ref|NP_634767.1| - 1.4e-11 44.5 0.0 1.8e-11 44.2 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain ANAPC4_WD40 PF12894.7 gi|21228845|ref|NP_634767.1| - 0.12 12.6 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain V_ATPase_I PF01496.19 gi|21228848|ref|NP_634770.1| - 5e-05 21.5 0.1 6.3e-05 21.1 0.1 1.1 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF4834 PF16118.5 gi|21228848|ref|NP_634770.1| - 0.00056 20.8 5.9 0.011 16.6 5.9 2.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4834) Connexin PF00029.19 gi|21228848|ref|NP_634770.1| - 0.12 12.1 0.2 0.23 11.2 0.2 1.4 1 0 0 1 1 1 0 Connexin GCD14 PF08704.10 gi|21228848|ref|NP_634770.1| - 0.47 10.1 2.0 0.69 9.5 2.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Zip PF02535.22 gi|21228848|ref|NP_634770.1| - 0.85 8.8 6.2 1.7 7.8 6.2 1.6 1 1 0 1 1 1 0 ZIP Zinc transporter Ctr PF04145.15 gi|21228848|ref|NP_634770.1| - 1 10.0 5.5 0.8 10.3 3.0 2.2 2 2 0 2 2 2 0 Ctr copper transporter family Phage_Gp23 PF10669.9 gi|21228848|ref|NP_634770.1| - 2.6 8.4 4.1 0.77 10.1 0.1 2.1 3 0 0 3 3 3 0 Protein gp23 (Bacteriophage A118) MAP17 PF15807.5 gi|21228848|ref|NP_634770.1| - 4.6 7.5 7.7 9.4 6.5 7.7 1.4 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 PocR PF10114.9 gi|21228850|ref|NP_634772.1| - 3.2e-48 163.6 0.4 8.1e-48 162.3 0.0 1.9 2 0 0 2 2 2 1 Sensory domain found in PocR PAS PF00989.25 gi|21228850|ref|NP_634772.1| - 1.6e-31 108.6 0.0 7.5e-15 54.9 0.0 4.6 4 0 0 4 4 4 4 PAS fold HisKA_2 PF07568.12 gi|21228850|ref|NP_634772.1| - 6.7e-30 103.0 0.6 6.7e-30 103.0 0.6 3.3 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.7 gi|21228850|ref|NP_634772.1| - 2.2e-28 98.5 0.0 1.5e-14 54.1 0.0 5.4 5 0 0 5 5 5 3 PAS domain PAS_4 PF08448.10 gi|21228850|ref|NP_634772.1| - 3e-25 88.6 0.0 3.3e-09 37.0 0.0 5.2 4 2 0 4 4 4 4 PAS fold PAS_3 PF08447.12 gi|21228850|ref|NP_634772.1| - 2e-15 56.8 0.0 1.7e-06 28.2 0.0 4.1 4 0 0 4 4 4 3 PAS fold PAS_8 PF13188.7 gi|21228850|ref|NP_634772.1| - 5.9e-12 45.3 0.0 9.6e-05 22.3 0.0 3.8 3 0 0 3 3 3 2 PAS domain HATPase_c PF02518.26 gi|21228850|ref|NP_634772.1| - 1.6e-07 31.8 0.1 5.2e-07 30.2 0.1 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.6 gi|21228850|ref|NP_634772.1| - 4.4e-07 30.4 0.0 0.003 18.1 0.0 3.2 2 0 0 2 2 2 2 PAS domain PAS_7 PF12860.7 gi|21228850|ref|NP_634772.1| - 5.9e-06 26.4 0.2 3.1 8.0 0.0 5.7 5 2 0 5 5 5 1 PAS fold HWE_HK PF07536.14 gi|21228850|ref|NP_634772.1| - 0.0035 18.0 0.6 0.021 15.5 0.0 2.6 2 0 0 2 2 2 1 HWE histidine kinase MEKHLA PF08670.11 gi|21228850|ref|NP_634772.1| - 0.044 13.7 0.0 0.13 12.2 0.0 1.8 1 0 0 1 1 1 0 MEKHLA domain HATPase_c_2 PF13581.6 gi|21228850|ref|NP_634772.1| - 0.077 12.9 0.0 0.2 11.6 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Peptidase_M20 PF01546.28 gi|21228851|ref|NP_634773.1| - 1.5e-14 54.2 0.0 2.4e-14 53.5 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|21228851|ref|NP_634773.1| - 0.00034 20.5 0.0 0.00071 19.5 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.14 gi|21228851|ref|NP_634773.1| - 0.015 14.3 0.0 0.75 8.8 0.0 3.2 3 1 1 4 4 4 0 M42 glutamyl aminopeptidase DNA_photolyase PF00875.18 gi|21228851|ref|NP_634773.1| - 0.14 12.2 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 DNA photolyase Peptidase_M28 PF04389.17 gi|21228851|ref|NP_634773.1| - 0.21 11.3 0.0 0.76 9.4 0.0 1.8 2 0 0 2 2 2 0 Peptidase family M28 UPF0114 PF03350.16 gi|21228852|ref|NP_634774.1| - 3.5e-24 85.3 5.0 5.6e-24 84.6 5.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein family, UPF0114 DsbD PF02683.15 gi|21228852|ref|NP_634774.1| - 0.00072 19.5 3.3 0.61 9.9 2.2 2.4 1 1 1 2 2 2 2 Cytochrome C biogenesis protein transmembrane region DUF1269 PF06897.12 gi|21228853|ref|NP_634775.1| - 1.4e-35 121.5 0.3 2.1e-35 121.0 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1269) Gly-zipper_YMGG PF13441.6 gi|21228853|ref|NP_634775.1| - 0.00014 21.5 3.1 0.00028 20.5 3.1 1.4 1 0 0 1 1 1 1 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 gi|21228853|ref|NP_634775.1| - 0.0016 18.4 2.5 0.0026 17.7 2.5 1.3 1 0 0 1 1 1 1 Glycine zipper DUF456 PF04306.13 gi|21228853|ref|NP_634775.1| - 0.012 15.9 2.6 0.015 15.5 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF456) OSR1_C PF12202.8 gi|21228853|ref|NP_634775.1| - 0.015 15.5 0.1 0.045 14.0 0.0 1.8 2 0 0 2 2 2 0 Oxidative-stress-responsive kinase 1 C-terminal domain Romo1 PF10247.9 gi|21228853|ref|NP_634775.1| - 0.35 11.3 5.0 0.48 10.8 0.1 2.3 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 Gly-zipper_OmpA PF13436.6 gi|21228853|ref|NP_634775.1| - 0.37 10.6 6.7 1.1 9.1 6.7 1.8 1 1 0 1 1 1 0 Glycine-zipper domain Bacteriocin_IIc PF10439.9 gi|21228853|ref|NP_634775.1| - 0.56 10.4 6.3 0.94 9.6 6.3 1.3 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide AI-2E_transport PF01594.16 gi|21228854|ref|NP_634776.1| - 2.3e-44 151.9 36.6 2.6e-44 151.7 36.6 1.0 1 0 0 1 1 1 1 AI-2E family transporter Phage_integrase PF00589.22 gi|21228855|ref|NP_634777.1| - 7e-09 35.7 0.0 1.3e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_integr_3 PF16795.5 gi|21228855|ref|NP_634777.1| - 0.024 14.6 0.3 0.06 13.3 0.2 1.9 2 1 0 2 2 2 0 Archaeal phage integrase DUF927 PF06048.11 gi|21228856|ref|NP_634778.1| - 1.2e-34 120.2 0.0 1.9e-34 119.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF927) BLACT_WH PF17778.1 gi|21228856|ref|NP_634778.1| - 0.0004 20.3 0.1 0.0012 18.8 0.1 1.8 1 0 0 1 1 1 1 Beta-lactamase associated winged helix domain RHH_8 PF17723.1 gi|21228856|ref|NP_634778.1| - 0.43 10.8 2.3 3.4 7.9 0.2 3.2 3 1 1 4 4 4 0 Ribbon-Helix-Helix transcriptional regulator family NBD94 PF16830.5 gi|21228856|ref|NP_634778.1| - 3 8.3 9.3 1.2 9.6 1.9 3.5 2 1 0 2 2 2 0 Nucleotide-Binding Domain 94 of RH FAT PF02259.23 gi|21228858|ref|NP_634780.1| - 0.018 14.3 1.0 0.023 13.9 1.0 1.1 1 0 0 1 1 1 0 FAT domain DSHCT PF08148.12 gi|21228858|ref|NP_634780.1| - 0.062 13.0 1.1 0.28 10.9 1.1 2.2 1 1 0 1 1 1 0 DSHCT (NUC185) domain DUF2951 PF11166.8 gi|21228858|ref|NP_634780.1| - 2.9 8.2 6.8 0.61 10.3 0.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2951) BLOC1_2 PF10046.9 gi|21228859|ref|NP_634781.1| - 0.022 15.0 4.6 0.051 13.9 2.1 2.2 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Tup_N PF08581.10 gi|21228859|ref|NP_634781.1| - 0.037 14.3 5.7 0.038 14.3 3.5 1.8 1 1 0 2 2 2 0 Tup N-terminal T3SS_needle_E PF08988.10 gi|21228859|ref|NP_634781.1| - 0.049 13.8 0.2 0.72 10.0 0.0 2.3 1 1 1 2 2 2 0 Type III secretion system, cytoplasmic E component of needle tRNA-synt_2 PF00152.20 gi|21228859|ref|NP_634781.1| - 0.39 9.7 2.1 0.46 9.5 2.1 1.1 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) LexA_DNA_bind PF01726.16 gi|21228860|ref|NP_634782.1| - 0.00012 21.7 1.1 0.039 13.7 0.2 2.6 2 1 0 2 2 2 2 LexA DNA binding domain HTH_38 PF13936.6 gi|21228860|ref|NP_634782.1| - 0.0062 16.3 0.3 0.19 11.5 0.1 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain FaeA PF04703.12 gi|21228860|ref|NP_634782.1| - 0.0096 16.3 0.1 0.2 12.0 0.0 2.4 2 0 0 2 2 2 1 FaeA-like protein IF2_N PF04760.15 gi|21228860|ref|NP_634782.1| - 0.037 13.9 0.1 7.8 6.4 0.0 3.3 3 0 0 3 3 3 0 Translation initiation factor IF-2, N-terminal region z-alpha PF02295.17 gi|21228860|ref|NP_634782.1| - 0.22 11.6 1.0 17 5.5 0.0 2.4 2 0 0 2 2 2 0 Adenosine deaminase z-alpha domain MetOD1 PF18546.1 gi|21228862|ref|NP_634784.1| - 0.23 11.4 5.3 12 5.9 0.1 4.3 3 1 2 5 5 5 0 Metanogen output domain 1 AHJR-like PF18743.1 gi|21228863|ref|NP_634785.1| - 0.063 12.8 1.1 0.24 11.0 0.0 2.3 3 0 0 3 3 3 0 REase_AHJR-like Resolvase PF00239.21 gi|21228865|ref|NP_634787.1| - 4.6e-31 107.9 0.5 4.6e-31 107.9 0.5 1.3 2 0 0 2 2 2 1 Resolvase, N terminal domain CsgG PF03783.14 gi|21228868|ref|NP_634790.1| - 0.0041 16.4 0.0 0.0055 16.0 0.0 1.2 1 0 0 1 1 1 1 Curli production assembly/transport component CsgG DIMCO_N PF16844.5 gi|21228868|ref|NP_634790.1| - 0.017 15.4 0.1 0.027 14.8 0.1 1.3 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor, N-terminal AAA_25 PF13481.6 gi|21228869|ref|NP_634791.1| - 0.019 14.5 0.0 0.038 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|21228869|ref|NP_634791.1| - 0.11 13.1 0.2 0.4 11.2 0.0 2.1 2 1 0 2 2 2 0 AAA domain LOR PF04525.12 gi|21228870|ref|NP_634792.1| - 1.5e-10 41.0 0.2 1.8e-10 40.7 0.2 1.1 1 0 0 1 1 1 1 LURP-one-related DUF1869 PF08956.10 gi|21228870|ref|NP_634792.1| - 0.1 12.5 0.4 0.2 11.6 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1869) YorP PF09629.10 gi|21228870|ref|NP_634792.1| - 0.12 12.6 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 YorP protein Fe-ADH PF00465.19 gi|21228871|ref|NP_634793.1| - 2e-130 434.9 3.5 2.3e-130 434.7 3.5 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|21228871|ref|NP_634793.1| - 4.7e-18 65.8 2.6 8.5e-10 38.7 0.0 2.2 1 1 1 2 2 2 2 Iron-containing alcohol dehydrogenase Peripla_BP_6 PF13458.6 gi|21228871|ref|NP_634793.1| - 0.018 14.7 0.2 0.094 12.4 0.0 2.0 2 0 0 2 2 2 0 Periplasmic binding protein LAGLIDADG_3 PF14528.6 gi|21228871|ref|NP_634793.1| - 0.029 14.7 0.0 0.54 10.6 0.0 2.2 2 0 0 2 2 2 0 LAGLIDADG-like domain TetR_C_25 PF17933.1 gi|21228871|ref|NP_634793.1| - 0.061 13.6 0.1 0.39 11.1 0.0 2.2 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain GDE_C PF06202.14 gi|21228872|ref|NP_634794.1| - 1.8e-135 451.8 0.0 4.6e-135 450.5 0.0 1.6 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|21228872|ref|NP_634794.1| - 9.7e-63 211.5 0.0 1.4e-62 211.0 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal Glyco_hydro_100 PF12899.7 gi|21228872|ref|NP_634794.1| - 0.00092 18.0 1.0 0.11 11.1 0.0 2.3 2 1 0 2 2 2 2 Alkaline and neutral invertase DUF608 PF04685.13 gi|21228872|ref|NP_634794.1| - 0.006 15.8 0.4 0.0094 15.2 0.4 1.2 1 0 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Bac_rhamnosid6H PF17389.2 gi|21228872|ref|NP_634794.1| - 0.029 13.7 0.0 0.04 13.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glyco_hydro_130 PF04041.13 gi|21228873|ref|NP_634795.1| - 1e-56 192.3 0.0 1.2e-56 192.0 0.0 1.0 1 0 0 1 1 1 1 beta-1,4-mannooligosaccharide phosphorylase MarR_2 PF12802.7 gi|21228874|ref|NP_634796.1| - 1.3e-05 25.0 0.0 1.9e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|21228874|ref|NP_634796.1| - 0.00012 21.8 0.0 0.00015 21.5 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|21228874|ref|NP_634796.1| - 0.0033 17.3 0.0 0.0047 16.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|21228874|ref|NP_634796.1| - 0.0054 16.3 0.0 0.011 15.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TBPIP PF07106.13 gi|21228874|ref|NP_634796.1| - 0.0089 15.9 0.1 0.055 13.4 0.0 2.1 1 1 1 2 2 2 1 TBPIP/Hop2 winged helix domain TrmB PF01978.19 gi|21228874|ref|NP_634796.1| - 0.01 15.7 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|21228874|ref|NP_634796.1| - 0.016 15.1 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|21228874|ref|NP_634796.1| - 0.031 14.2 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|21228874|ref|NP_634796.1| - 0.038 14.3 0.0 0.054 13.8 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator Crp PF00325.20 gi|21228874|ref|NP_634796.1| - 0.075 12.7 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family Cullin PF00888.22 gi|21228874|ref|NP_634796.1| - 0.081 11.5 0.0 0.098 11.2 0.0 1.0 1 0 0 1 1 1 0 Cullin family HTH_20 PF12840.7 gi|21228874|ref|NP_634796.1| - 0.087 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_9 PF08221.11 gi|21228874|ref|NP_634796.1| - 0.091 12.9 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Phage_rep_O PF04492.13 gi|21228874|ref|NP_634796.1| - 0.11 13.0 0.0 0.15 12.7 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage replication protein O Sigma54_DBD PF04552.13 gi|21228874|ref|NP_634796.1| - 0.12 12.0 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Sigma-54, DNA binding domain LacI PF00356.21 gi|21228874|ref|NP_634796.1| - 0.13 12.0 0.1 0.26 11.1 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family HTH_27 PF13463.6 gi|21228874|ref|NP_634796.1| - 0.14 12.6 0.0 0.18 12.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain PAS_3 PF08447.12 gi|21228875|ref|NP_634797.1| - 8.8e-41 138.1 2.7 1.4e-21 76.5 0.0 5.2 6 0 0 6 6 6 4 PAS fold PAS_9 PF13426.7 gi|21228875|ref|NP_634797.1| - 1.2e-39 134.7 1.5 8.1e-16 58.2 0.0 4.7 4 0 0 4 4 4 4 PAS domain PAS_4 PF08448.10 gi|21228875|ref|NP_634797.1| - 9.1e-34 116.0 0.0 5.2e-11 42.8 0.0 4.2 4 0 0 4 4 4 4 PAS fold PAS PF00989.25 gi|21228875|ref|NP_634797.1| - 1.9e-33 114.8 0.0 1.2e-12 47.8 0.0 4.4 4 0 0 4 4 4 4 PAS fold HATPase_c PF02518.26 gi|21228875|ref|NP_634797.1| - 1.3e-28 99.8 0.3 3.7e-28 98.3 0.3 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|21228875|ref|NP_634797.1| - 4.3e-18 65.1 0.3 4.8e-17 61.7 0.2 2.7 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 gi|21228875|ref|NP_634797.1| - 1.2e-11 44.3 0.0 0.00043 20.2 0.0 4.0 4 1 0 4 4 4 2 PAS domain HATPase_c_5 PF14501.6 gi|21228875|ref|NP_634797.1| - 2.6e-05 24.0 0.0 8.2e-05 22.5 0.0 1.8 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.6 gi|21228875|ref|NP_634797.1| - 0.00027 20.8 0.2 0.0014 18.5 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF5344 PF17279.2 gi|21228875|ref|NP_634797.1| - 0.0072 16.9 3.6 0.073 13.6 1.1 2.8 2 0 0 2 2 2 1 Family of unknown function (DUF5344) PAS_10 PF13596.6 gi|21228875|ref|NP_634797.1| - 0.038 14.6 0.8 25 5.5 0.0 3.6 3 1 0 3 3 3 0 PAS domain COG2 PF06148.11 gi|21228875|ref|NP_634797.1| - 0.16 12.0 1.2 0.39 10.8 0.1 2.2 2 0 0 2 2 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Tweety PF04906.13 gi|21228875|ref|NP_634797.1| - 0.21 10.2 0.1 0.52 8.9 0.1 1.6 1 0 0 1 1 1 0 Tweety PrsW-protease PF13367.6 gi|21228877|ref|NP_634799.1| - 8.7e-26 90.6 12.9 8.7e-26 90.6 12.9 1.5 1 1 0 1 1 1 1 PrsW family intramembrane metalloprotease Romo1 PF10247.9 gi|21228877|ref|NP_634799.1| - 0.51 10.7 4.2 13 6.2 0.7 2.7 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 Acylphosphatase PF00708.18 gi|21228879|ref|NP_634801.1| - 1.7e-18 66.8 0.0 1.9e-18 66.6 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase DmpG_comm PF07836.11 gi|21228879|ref|NP_634801.1| - 0.035 13.6 0.0 0.052 13.1 0.0 1.3 1 0 0 1 1 1 0 DmpG-like communication domain Cation_efflux PF01545.21 gi|21228880|ref|NP_634802.1| - 5.8e-45 153.5 15.0 7.4e-45 153.1 15.0 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|21228880|ref|NP_634802.1| - 2.8e-19 69.0 0.2 5e-19 68.2 0.2 1.4 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Metalloenzyme PF01676.18 gi|21228881|ref|NP_634803.1| - 3.6e-10 39.6 0.0 5.9e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|21228881|ref|NP_634803.1| - 3.7e-06 26.8 0.0 2e-05 24.4 0.0 1.9 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|21228881|ref|NP_634803.1| - 0.00054 19.5 0.0 0.0015 18.0 0.0 1.7 2 0 0 2 2 2 1 Sulfatase Alk_phosphatase PF00245.20 gi|21228881|ref|NP_634803.1| - 0.0087 15.0 0.0 0.015 14.2 0.0 1.4 1 0 0 1 1 1 1 Alkaline phosphatase TcfC PF16967.5 gi|21228881|ref|NP_634803.1| - 0.17 11.4 0.0 0.35 10.4 0.0 1.5 1 0 0 1 1 1 0 E-set like domain DUF89 PF01937.19 gi|21228882|ref|NP_634804.1| - 3.4e-55 187.4 0.1 4.2e-55 187.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 BRCT_assoc PF12820.7 gi|21228882|ref|NP_634804.1| - 0.12 12.2 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 Serine-rich domain associated with BRCT CooT PF10133.9 gi|21228883|ref|NP_634805.1| - 1.3e-18 67.0 1.2 1.5e-18 66.8 1.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase accessory protein CooT Gp_dh_C PF02800.20 gi|21228884|ref|NP_634806.1| - 4.5e-28 97.8 0.0 6.6e-28 97.3 0.0 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|21228884|ref|NP_634806.1| - 1.1e-10 41.7 0.1 2.8e-10 40.4 0.1 1.7 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|21228884|ref|NP_634806.1| - 2.3e-06 27.8 0.6 1.8e-05 25.0 0.0 2.6 3 0 0 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|21228884|ref|NP_634806.1| - 0.00041 20.6 0.1 0.0012 19.0 0.1 1.8 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|21228884|ref|NP_634806.1| - 0.0018 17.7 0.1 0.0081 15.5 0.1 2.0 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|21228884|ref|NP_634806.1| - 0.006 17.0 0.0 0.057 13.9 0.1 2.3 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|21228884|ref|NP_634806.1| - 0.0061 17.2 0.1 0.015 15.9 0.1 1.7 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|21228884|ref|NP_634806.1| - 0.014 16.3 0.1 0.026 15.3 0.1 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold TrkA_N PF02254.18 gi|21228884|ref|NP_634806.1| - 0.044 14.0 0.0 0.092 13.0 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain PglD_N PF17836.1 gi|21228884|ref|NP_634806.1| - 0.13 12.9 0.0 0.3 11.7 0.0 1.7 1 0 0 1 1 1 0 PglD N-terminal domain Inositol_P PF00459.25 gi|21228885|ref|NP_634807.1| - 5.4e-37 127.8 0.0 6.4e-37 127.5 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|21228885|ref|NP_634807.1| - 1.1e-06 28.3 0.0 1.6e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain FBPase_glpX PF03320.13 gi|21228885|ref|NP_634807.1| - 0.031 13.1 0.0 0.054 12.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ECR1_N PF14382.6 gi|21228885|ref|NP_634807.1| - 0.12 12.2 0.1 0.37 10.6 0.0 1.9 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region NAD_kinase PF01513.21 gi|21228886|ref|NP_634808.1| - 8.1e-58 195.9 0.5 9.8e-58 195.6 0.5 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|21228886|ref|NP_634808.1| - 0.00033 20.2 0.0 0.00059 19.4 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain HMGL-like PF00682.19 gi|21228887|ref|NP_634809.1| - 9.6e-80 267.9 3.3 1.4e-79 267.4 3.3 1.2 1 0 0 1 1 1 1 HMGL-like Phage_TAC_12 PF12363.8 gi|21228887|ref|NP_634809.1| - 0.067 13.6 0.1 1.1 9.7 0.0 2.7 2 0 0 2 2 2 0 Phage tail assembly chaperone protein, TAC DUF3160 PF11369.8 gi|21228889|ref|NP_634811.1| - 1.7e-248 826.2 1.9 2e-248 826.0 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) TPP_enzyme_C PF02775.21 gi|21228890|ref|NP_634812.1| - 6.9e-10 38.9 0.0 1.6e-09 37.7 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|21228890|ref|NP_634812.1| - 0.015 15.1 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transket_pyr PF02779.24 gi|21228890|ref|NP_634812.1| - 0.018 14.7 0.0 0.037 13.7 0.0 1.5 1 0 0 1 1 1 0 Transketolase, pyrimidine binding domain DXP_synthase_N PF13292.6 gi|21228890|ref|NP_634812.1| - 0.034 13.3 0.1 0.057 12.6 0.1 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Phage_holin_3_5 PF16085.5 gi|21228890|ref|NP_634812.1| - 0.44 10.7 3.4 3 8.0 0.3 2.3 2 0 0 2 2 2 0 Bacteriophage holin Hol, superfamily III DUF1743 PF08489.11 gi|21228891|ref|NP_634813.1| - 1.5e-09 38.0 0.6 5e-06 26.6 0.0 4.6 4 1 1 5 5 5 1 Domain of unknown function (DUF1743) FMN_red PF03358.15 gi|21228892|ref|NP_634814.1| - 3.1e-30 105.0 0.0 4.3e-30 104.5 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21228892|ref|NP_634814.1| - 3.9e-09 36.5 0.0 4.4e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold RadC PF04002.15 gi|21228893|ref|NP_634815.1| - 4.1e-46 155.9 0.0 5.9e-46 155.4 0.0 1.2 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.6 gi|21228893|ref|NP_634815.1| - 0.00093 19.0 0.0 0.0019 17.9 0.0 1.6 2 0 0 2 2 2 1 Prokaryotic homologs of the JAB domain RB_A PF01858.17 gi|21228893|ref|NP_634815.1| - 0.0088 15.9 0.1 0.012 15.4 0.1 1.2 1 0 0 1 1 1 1 Retinoblastoma-associated protein A domain HHH PF00633.23 gi|21228893|ref|NP_634815.1| - 0.0097 15.7 0.0 0.026 14.4 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|21228893|ref|NP_634815.1| - 0.011 15.8 0.0 0.022 14.9 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|21228893|ref|NP_634815.1| - 0.13 12.6 0.1 0.24 11.7 0.1 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif MoaE PF02391.17 gi|21228894|ref|NP_634816.1| - 4.1e-26 91.5 0.1 7.6e-26 90.6 0.1 1.4 1 0 0 1 1 1 1 MoaE protein MobB PF03205.14 gi|21228894|ref|NP_634816.1| - 5.9e-17 61.8 0.0 1.3e-16 60.7 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B DUF463 PF04317.12 gi|21228894|ref|NP_634816.1| - 0.015 14.2 0.1 0.025 13.5 0.1 1.3 1 0 0 1 1 1 0 YcjX-like family, DUF463 AAA_16 PF13191.6 gi|21228894|ref|NP_634816.1| - 0.033 14.6 0.2 1.9 8.8 0.1 2.4 2 0 0 2 2 2 0 AAA ATPase domain GBP PF02263.19 gi|21228894|ref|NP_634816.1| - 0.04 13.2 0.7 0.06 12.6 0.7 1.2 1 0 0 1 1 1 0 Guanylate-binding protein, N-terminal domain NTP_transf_3 PF12804.7 gi|21228895|ref|NP_634817.1| - 6.5e-33 114.3 0.0 8.1e-33 114.0 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|21228895|ref|NP_634817.1| - 0.0022 17.8 0.0 0.0036 17.1 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF523 PF04463.12 gi|21228896|ref|NP_634818.1| - 2e-05 24.7 0.0 2.7e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF523) SPC25 PF06703.11 gi|21228897|ref|NP_634819.1| - 0.16 11.8 0.1 0.16 11.8 0.1 3.1 3 1 0 3 3 3 0 Microsomal signal peptidase 25 kDa subunit (SPC25) UPF0182 PF03699.13 gi|21228897|ref|NP_634819.1| - 6.7 4.7 12.9 8.5 4.4 12.9 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) ATP_bind_3 PF01171.20 gi|21228898|ref|NP_634820.1| - 3.5e-13 49.7 0.0 6.4e-13 48.9 0.0 1.4 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|21228898|ref|NP_634820.1| - 1.2e-06 28.7 0.0 1.8e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.16 gi|21228898|ref|NP_634820.1| - 3.8e-05 22.6 0.0 5.3e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|21228898|ref|NP_634820.1| - 0.00069 18.8 0.0 0.00092 18.4 0.0 1.2 1 0 0 1 1 1 1 NAD synthase Diphthami_syn_2 PF01902.17 gi|21228898|ref|NP_634820.1| - 0.0012 18.3 0.1 0.0019 17.7 0.1 1.3 1 0 0 1 1 1 1 Diphthamide synthase Asn_synthase PF00733.21 gi|21228898|ref|NP_634820.1| - 0.0013 18.5 0.0 0.0017 18.1 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 gi|21228898|ref|NP_634820.1| - 0.0024 17.4 0.0 0.011 15.3 0.0 2.3 2 1 0 2 2 2 1 Queuosine biosynthesis protein QueC zn-ribbon_14 PF16503.5 gi|21228898|ref|NP_634820.1| - 0.0032 16.9 5.1 0.0032 16.9 5.1 3.5 4 0 0 4 4 4 1 Zinc-ribbon ThiI PF02568.14 gi|21228898|ref|NP_634820.1| - 0.045 13.3 0.0 0.1 12.2 0.0 1.5 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) Spt5-NGN PF03439.13 gi|21228898|ref|NP_634820.1| - 0.057 13.3 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section Ribosomal_S27e PF01667.17 gi|21228898|ref|NP_634820.1| - 0.059 13.1 0.5 0.059 13.1 0.5 2.4 2 0 0 2 2 2 0 Ribosomal protein S27 Pirin PF02678.16 gi|21228899|ref|NP_634821.1| - 1.9e-28 98.6 0.3 3.4e-28 97.8 0.3 1.4 1 0 0 1 1 1 1 Pirin Pirin_C_2 PF17954.1 gi|21228899|ref|NP_634821.1| - 3.5e-13 49.5 0.0 8.1e-13 48.4 0.0 1.6 1 0 0 1 1 1 1 Quercetinase C-terminal cupin domain Cupin_2 PF07883.11 gi|21228899|ref|NP_634821.1| - 2e-05 24.2 0.4 0.00036 20.2 0.2 2.4 2 0 0 2 2 2 1 Cupin domain Pirin_C PF05726.13 gi|21228899|ref|NP_634821.1| - 0.015 15.6 0.0 0.16 12.3 0.0 2.1 2 0 0 2 2 2 0 Pirin C-terminal cupin domain Cupin_7 PF12973.7 gi|21228899|ref|NP_634821.1| - 0.1 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 ChrR Cupin-like domain TctA PF01970.16 gi|21228900|ref|NP_634822.1| - 8.6e-77 258.6 29.4 1e-76 258.3 29.4 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family Y1_Tnp PF01797.16 gi|21228901|ref|NP_634823.1| - 1.1e-35 122.3 1.5 1.4e-35 122.0 1.5 1.1 1 0 0 1 1 1 1 Transposase IS200 like PASTA PF03793.19 gi|21228902|ref|NP_634824.1| - 6.1e-11 42.0 0.3 1.7e-10 40.6 0.0 1.8 2 0 0 2 2 2 1 PASTA domain BRE1 PF08647.11 gi|21228902|ref|NP_634824.1| - 0.01 15.9 2.6 0.02 14.9 2.6 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase Tropomyosin_1 PF12718.7 gi|21228902|ref|NP_634824.1| - 0.044 13.9 4.8 0.061 13.5 4.8 1.2 1 0 0 1 1 1 0 Tropomyosin like DUF1664 PF07889.12 gi|21228902|ref|NP_634824.1| - 0.08 13.0 2.0 0.1 12.6 0.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) zf-C4H2 PF10146.9 gi|21228902|ref|NP_634824.1| - 0.36 11.1 1.9 0.44 10.8 1.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF724 PF05266.14 gi|21228902|ref|NP_634824.1| - 0.38 10.6 2.8 0.51 10.1 2.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF3847 PF12958.7 gi|21228902|ref|NP_634824.1| - 0.74 10.0 3.4 0.22 11.6 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3847) ABC_tran_CTD PF16326.5 gi|21228902|ref|NP_634824.1| - 7.9 6.8 9.6 4.5 7.6 5.9 2.5 2 1 0 2 2 2 0 ABC transporter C-terminal domain TPR_1 PF00515.28 gi|21228903|ref|NP_634825.1| - 2.6e-45 150.4 2.9 3.8e-07 29.6 0.0 6.8 6 1 0 7 7 7 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21228903|ref|NP_634825.1| - 3.7e-37 123.4 6.8 2.6e-05 24.0 0.2 6.6 7 0 0 7 7 6 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21228903|ref|NP_634825.1| - 8.9e-34 114.9 7.6 1.6e-07 30.9 0.4 6.9 2 2 5 7 7 7 6 TPR repeat TPR_8 PF13181.6 gi|21228903|ref|NP_634825.1| - 4.4e-33 110.7 3.6 0.00012 22.0 0.2 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21228903|ref|NP_634825.1| - 3.1e-27 93.0 1.3 0.001 19.3 0.0 6.6 7 0 0 7 7 6 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21228903|ref|NP_634825.1| - 1.9e-26 92.4 3.7 5.4e-09 36.6 0.6 3.5 3 1 1 4 4 4 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21228903|ref|NP_634825.1| - 3e-23 82.1 16.2 1.1e-08 35.4 0.8 4.8 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21228903|ref|NP_634825.1| - 6e-22 76.5 10.3 5.4e-05 23.7 0.3 7.1 2 2 5 7 7 7 6 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21228903|ref|NP_634825.1| - 2.1e-20 72.8 6.2 4.5e-07 30.1 0.1 4.8 2 2 2 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21228903|ref|NP_634825.1| - 2.4e-19 69.2 3.5 9.8e-07 28.8 0.1 3.9 1 1 2 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21228903|ref|NP_634825.1| - 3.9e-14 51.6 0.4 0.0023 17.8 0.0 6.4 5 1 1 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21228903|ref|NP_634825.1| - 9.5e-10 38.5 5.1 1.7 9.5 0.1 5.8 6 0 0 6 6 5 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|21228903|ref|NP_634825.1| - 1.4e-09 37.8 8.1 0.071 13.2 0.0 6.3 5 2 1 7 7 7 3 Fis1 C-terminal tetratricopeptide repeat ANAPC3 PF12895.7 gi|21228903|ref|NP_634825.1| - 5.4e-08 33.0 1.2 0.0073 16.5 0.0 2.8 2 1 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 BTAD PF03704.17 gi|21228903|ref|NP_634825.1| - 1.5e-06 28.7 3.2 0.061 13.7 1.6 3.4 1 1 2 3 3 3 3 Bacterial transcriptional activator domain TPR_15 PF13429.6 gi|21228903|ref|NP_634825.1| - 1.6e-06 27.5 5.2 0.017 14.3 2.7 3.4 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21228903|ref|NP_634825.1| - 3.1e-06 26.9 7.6 2.7 8.0 0.0 6.2 6 0 0 6 6 6 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|21228903|ref|NP_634825.1| - 3.2e-06 26.3 0.7 0.032 13.1 0.1 3.4 1 1 2 3 3 3 1 NMDA receptor-regulated protein 1 TPR_MalT PF17874.1 gi|21228903|ref|NP_634825.1| - 0.00019 20.9 0.0 0.018 14.4 0.0 3.1 2 1 0 3 3 3 1 MalT-like TPR region TPR_21 PF09976.9 gi|21228903|ref|NP_634825.1| - 0.00022 21.0 0.5 0.51 10.0 0.2 4.0 1 1 3 4 4 4 1 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 gi|21228903|ref|NP_634825.1| - 0.00075 19.9 1.9 0.6 10.9 0.0 4.3 5 0 0 5 5 4 1 Tetratricopeptide repeat PPTA PF01239.22 gi|21228903|ref|NP_634825.1| - 0.0008 19.1 0.0 0.16 11.7 0.0 3.4 3 0 0 3 3 3 1 Protein prenyltransferase alpha subunit repeat TPR_20 PF14561.6 gi|21228903|ref|NP_634825.1| - 0.00081 19.7 5.7 0.16 12.3 0.0 4.1 3 1 2 5 5 4 1 Tetratricopeptide repeat DUF3856 PF12968.7 gi|21228903|ref|NP_634825.1| - 0.0012 18.9 1.6 20 5.2 0.1 5.0 2 2 2 5 5 5 0 Domain of Unknown Function (DUF3856) SRP_TPR_like PF17004.5 gi|21228903|ref|NP_634825.1| - 0.0066 16.5 0.2 2.9 8.0 0.0 3.2 2 1 0 2 2 2 1 Putative TPR-like repeat ChAPs PF09295.10 gi|21228903|ref|NP_634825.1| - 0.077 12.0 0.1 1.8 7.5 0.0 2.2 1 1 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) Coatomer_E PF04733.14 gi|21228903|ref|NP_634825.1| - 0.084 12.3 0.2 3.5 7.0 0.0 3.0 2 1 2 4 4 4 0 Coatomer epsilon subunit PPR PF01535.20 gi|21228903|ref|NP_634825.1| - 0.12 12.7 2.1 36 4.9 0.0 4.0 4 0 0 4 4 3 0 PPR repeat MIT PF04212.18 gi|21228903|ref|NP_634825.1| - 0.42 10.7 5.9 95 3.2 0.1 4.9 5 0 0 5 5 5 0 MIT (microtubule interacting and transport) domain TPR_1 PF00515.28 gi|21228904|ref|NP_634826.1| - 5.2e-29 98.9 5.8 3.9e-08 32.8 0.3 4.6 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21228904|ref|NP_634826.1| - 1.3e-25 87.4 1.7 3.3e-07 29.9 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21228904|ref|NP_634826.1| - 3.2e-25 86.2 6.0 9.2e-08 31.7 0.0 4.7 5 0 0 5 5 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21228904|ref|NP_634826.1| - 6.4e-20 70.6 3.4 2e-05 24.2 0.1 4.4 1 1 3 4 4 4 4 TPR repeat TPR_12 PF13424.6 gi|21228904|ref|NP_634826.1| - 5.8e-18 65.0 1.8 4.4e-07 30.1 0.0 3.4 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21228904|ref|NP_634826.1| - 1.8e-16 59.3 0.2 0.0013 18.9 0.0 4.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21228904|ref|NP_634826.1| - 8.2e-16 57.4 0.1 2.1e-05 25.0 0.1 4.0 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21228904|ref|NP_634826.1| - 4.3e-15 55.6 0.1 1.3e-08 34.8 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21228904|ref|NP_634826.1| - 1.2e-14 54.7 0.0 1.8e-08 34.9 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21228904|ref|NP_634826.1| - 2.6e-11 42.7 0.8 0.0073 16.3 0.0 4.0 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21228904|ref|NP_634826.1| - 1.1e-09 38.2 0.2 0.28 11.9 0.0 4.0 5 0 0 5 5 3 3 Tetratricopeptide repeat MIT PF04212.18 gi|21228904|ref|NP_634826.1| - 4.8e-09 36.1 0.9 0.062 13.4 0.0 4.0 4 0 0 4 4 4 3 MIT (microtubule interacting and transport) domain TPR_10 PF13374.6 gi|21228904|ref|NP_634826.1| - 8.9e-09 34.9 0.3 0.25 11.3 0.1 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21228904|ref|NP_634826.1| - 9.6e-09 35.6 0.3 0.0017 18.8 0.0 3.2 2 1 1 3 3 3 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21228904|ref|NP_634826.1| - 5.7e-07 29.7 2.2 0.002 18.3 0.2 2.3 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 gi|21228904|ref|NP_634826.1| - 2e-06 27.0 0.2 0.002 17.1 0.0 2.3 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 DUF3856 PF12968.7 gi|21228904|ref|NP_634826.1| - 9.4e-06 25.8 0.0 0.2 11.7 0.0 3.0 1 1 1 2 2 2 2 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.6 gi|21228904|ref|NP_634826.1| - 7.7e-05 22.7 2.7 1 9.5 0.0 3.7 3 1 1 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat HTH_Bact PF18768.1 gi|21228904|ref|NP_634826.1| - 0.0009 18.8 0.2 0.37 10.4 0.0 4.1 3 2 2 5 5 5 1 Helix-turn-helix bacterial domain TPR_15 PF13429.6 gi|21228904|ref|NP_634826.1| - 0.0015 17.8 0.0 1.3 8.1 0.0 3.1 2 2 1 3 3 3 2 Tetratricopeptide repeat TPR_3 PF07720.12 gi|21228904|ref|NP_634826.1| - 0.0036 17.3 0.7 2.8 8.0 0.1 3.4 4 0 0 4 4 4 1 Tetratricopeptide repeat BTAD PF03704.17 gi|21228904|ref|NP_634826.1| - 0.0053 17.2 0.1 0.41 11.1 0.0 2.4 1 1 0 2 2 2 1 Bacterial transcriptional activator domain PPR PF01535.20 gi|21228904|ref|NP_634826.1| - 0.008 16.4 1.0 3 8.3 0.1 3.7 3 1 1 4 4 3 1 PPR repeat TPR_5 PF12688.7 gi|21228904|ref|NP_634826.1| - 0.048 13.9 0.1 19 5.6 0.0 2.6 1 1 0 2 2 2 0 Tetratrico peptide repeat TPR_21 PF09976.9 gi|21228904|ref|NP_634826.1| - 0.055 13.2 0.1 2.2 7.9 0.1 2.7 1 1 2 3 3 3 0 Tetratricopeptide repeat-like domain CbiA PF01656.23 gi|21228905|ref|NP_634827.1| - 0.00018 21.5 0.0 0.00023 21.2 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|21228905|ref|NP_634827.1| - 0.0091 15.8 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|21228905|ref|NP_634827.1| - 0.014 14.9 0.0 0.12 11.8 0.0 2.0 1 1 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Disaggr_repeat PF06848.11 gi|21228906|ref|NP_634828.1| - 1e-75 253.4 1.6 1.8e-75 252.6 1.6 1.4 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|21228906|ref|NP_634828.1| - 1.5e-68 230.4 12.9 3e-68 229.5 12.9 1.5 1 0 0 1 1 1 1 Disaggregatase related Beta_helix PF13229.6 gi|21228906|ref|NP_634828.1| - 7.4e-16 58.4 34.1 7.8e-15 55.1 12.3 2.5 1 1 1 2 2 2 2 Right handed beta helix region DUF5123 PF17161.4 gi|21228906|ref|NP_634828.1| - 3.4e-08 34.6 2.6 3.4e-08 34.6 2.6 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF5123) Asn_synthase PF00733.21 gi|21228907|ref|NP_634829.1| - 3.4e-54 184.9 0.4 1.7e-28 100.4 0.1 2.1 1 1 0 2 2 2 2 Asparagine synthase GATase_7 PF13537.6 gi|21228907|ref|NP_634829.1| - 2.3e-20 72.8 0.0 6.4e-20 71.3 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|21228907|ref|NP_634829.1| - 3.5e-14 53.1 0.0 7.9e-14 52.0 0.0 1.6 2 0 0 2 2 2 1 Glutamine amidotransferase domain NAD_synthase PF02540.17 gi|21228907|ref|NP_634829.1| - 0.015 14.4 0.0 0.024 13.8 0.0 1.3 1 0 0 1 1 1 0 NAD synthase ATP_bind_3 PF01171.20 gi|21228907|ref|NP_634829.1| - 0.12 12.1 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 PP-loop family PurS PF02700.14 gi|21228908|ref|NP_634830.1| - 9.7e-28 96.2 0.4 1.1e-27 96.0 0.4 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GATase_5 PF13507.6 gi|21228909|ref|NP_634831.1| - 1.7e-47 161.7 0.0 1.9e-47 161.6 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 gi|21228909|ref|NP_634831.1| - 4.5e-09 36.2 0.0 8.6e-09 35.3 0.0 1.5 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|21228909|ref|NP_634831.1| - 5.2e-09 36.1 0.0 8.6e-09 35.4 0.0 1.3 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|21228909|ref|NP_634831.1| - 1.8e-08 34.4 0.0 2.6e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family SNO PF01174.19 gi|21228909|ref|NP_634831.1| - 7.5e-05 22.7 0.0 0.0002 21.2 0.0 1.6 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|21228909|ref|NP_634831.1| - 0.0014 18.4 0.0 0.0028 17.5 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 FGE-sulfatase PF03781.16 gi|21228910|ref|NP_634832.1| - 6.3e-49 166.9 1.6 4e-48 164.3 1.6 2.0 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 pP_pnuc_2 PF18166.1 gi|21228910|ref|NP_634832.1| - 0.015 15.3 2.8 0.035 14.2 2.8 1.7 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease DUF1103 PF06513.11 gi|21228910|ref|NP_634832.1| - 0.024 14.2 7.6 0.039 13.6 7.6 1.3 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) DUF1724 PF08350.10 gi|21228911|ref|NP_634833.1| - 2.5e-16 59.5 0.0 5.3e-16 58.5 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21228911|ref|NP_634833.1| - 7.4e-05 22.5 0.0 0.00017 21.4 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|21228911|ref|NP_634833.1| - 0.053 13.4 0.0 0.12 12.3 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|21228911|ref|NP_634833.1| - 0.065 13.2 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DDDD PF10161.9 gi|21228911|ref|NP_634833.1| - 0.09 12.5 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Putative mitochondrial precursor protein HTH_11 PF08279.12 gi|21228911|ref|NP_634833.1| - 0.094 12.7 0.5 0.19 11.7 0.1 1.8 2 0 0 2 2 2 0 HTH domain HTH_20 PF12840.7 gi|21228911|ref|NP_634833.1| - 0.11 12.6 0.1 0.4 10.8 0.0 1.9 3 0 0 3 3 3 0 Helix-turn-helix domain DUF429 PF04250.13 gi|21228912|ref|NP_634834.1| - 1.1e-44 152.8 0.0 1.2e-44 152.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF429) tRNA-synt_His PF13393.6 gi|21228913|ref|NP_634835.1| - 0.081 12.2 0.6 0.1 11.8 0.6 1.1 1 0 0 1 1 1 0 Histidyl-tRNA synthetase tRNA_synthFbeta PF17759.1 gi|21228914|ref|NP_634836.1| - 5e-42 143.7 0.1 8.4e-42 143.0 0.1 1.4 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|21228914|ref|NP_634836.1| - 2.2e-18 66.3 0.4 3.8e-17 62.3 0.1 2.6 2 0 0 2 2 2 1 tRNA synthetase B5 domain B3_4 PF03483.17 gi|21228914|ref|NP_634836.1| - 4.9e-15 55.6 0.0 1e-14 54.6 0.0 1.5 1 0 0 1 1 1 1 B3/4 domain tRNA-synt_2d PF01409.20 gi|21228914|ref|NP_634836.1| - 2.4e-07 30.5 0.1 1.2e-06 28.2 0.1 1.9 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) PhetRS_B1 PF18262.1 gi|21228914|ref|NP_634836.1| - 0.00064 19.9 0.0 1.4 9.2 0.0 3.3 2 1 0 2 2 2 2 Phe-tRNA synthetase beta subunit B1 domain Diphthami_syn_2 PF01902.17 gi|21228915|ref|NP_634837.1| - 1.1e-50 172.1 0.0 1.5e-50 171.8 0.0 1.1 1 0 0 1 1 1 1 Diphthamide synthase PIN PF01850.21 gi|21228915|ref|NP_634837.1| - 0.066 13.7 0.0 0.14 12.7 0.0 1.5 1 0 0 1 1 1 0 PIN domain RNase_HII PF01351.18 gi|21228916|ref|NP_634838.1| - 4.7e-50 170.2 0.1 5.4e-50 170.0 0.1 1.0 1 0 0 1 1 1 1 Ribonuclease HII Ribosomal_S6 PF01250.17 gi|21228916|ref|NP_634838.1| - 0.028 14.7 0.0 0.061 13.6 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein S6 Pox_polyA_pol_N PF12630.7 gi|21228916|ref|NP_634838.1| - 0.032 14.6 0.1 0.062 13.7 0.1 1.4 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain eIF3_p135 PF12807.7 gi|21228916|ref|NP_634838.1| - 0.064 13.3 0.1 0.25 11.4 0.0 1.8 1 1 1 2 2 2 0 Translation initiation factor eIF3 subunit 135 Lactamase_B PF00753.27 gi|21228917|ref|NP_634839.1| - 5.4e-14 52.7 0.0 3.7e-13 49.9 0.0 2.0 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|21228917|ref|NP_634839.1| - 2.8e-05 23.7 0.1 5.2e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|21228917|ref|NP_634839.1| - 0.0019 18.1 0.0 0.0033 17.3 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Vps5 PF09325.10 gi|21228918|ref|NP_634840.1| - 0.0059 16.2 0.6 0.022 14.3 0.3 2.0 2 1 0 2 2 2 1 Vps5 C terminal like GATase PF00117.28 gi|21228919|ref|NP_634841.1| - 2.2e-45 154.8 0.0 2.6e-45 154.5 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|21228919|ref|NP_634841.1| - 1.5e-18 67.3 0.1 5.7e-18 65.5 0.1 1.8 1 1 0 1 1 1 1 Peptidase C26 Chorismate_bind PF00425.18 gi|21228920|ref|NP_634842.1| - 2.5e-95 318.9 0.0 2.4e-91 305.9 0.0 2.8 2 1 0 2 2 2 2 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|21228920|ref|NP_634842.1| - 2.3e-17 63.5 2.3 2.6e-15 56.9 1.2 3.3 2 1 0 2 2 2 1 Anthranilate synthase component I, N terminal region AP3D1 PF06375.11 gi|21228920|ref|NP_634842.1| - 0.043 14.0 4.6 0.083 13.1 4.6 1.4 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 PRAI PF00697.22 gi|21228921|ref|NP_634843.1| - 6.9e-32 110.8 0.0 2e-31 109.3 0.0 1.6 1 1 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TMP-TENI PF02581.17 gi|21228921|ref|NP_634843.1| - 0.0071 15.7 0.0 0.015 14.7 0.0 1.5 2 0 0 2 2 2 1 Thiamine monophosphate synthase DUF4152 PF13680.6 gi|21228921|ref|NP_634843.1| - 0.019 14.4 0.1 0.067 12.6 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4152) FMN_dh PF01070.18 gi|21228921|ref|NP_634843.1| - 0.022 13.8 0.0 2.9 6.8 0.0 2.7 1 1 1 2 2 2 0 FMN-dependent dehydrogenase Glyco_transf_4 PF13439.6 gi|21228921|ref|NP_634843.1| - 0.072 13.1 0.0 0.099 12.6 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 NMO PF03060.15 gi|21228921|ref|NP_634843.1| - 0.092 12.1 0.0 0.5 9.7 0.0 1.9 1 1 0 1 1 1 0 Nitronate monooxygenase His_biosynth PF00977.21 gi|21228921|ref|NP_634843.1| - 0.1 12.1 0.0 0.21 11.0 0.0 1.5 1 0 0 1 1 1 0 Histidine biosynthesis protein Glyco_trans_4_4 PF13579.6 gi|21228921|ref|NP_634843.1| - 0.15 12.5 0.0 0.26 11.7 0.0 1.4 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain Glycos_transf_3 PF00591.21 gi|21228922|ref|NP_634844.1| - 6.2e-99 330.7 1.0 1e-98 330.0 1.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|21228922|ref|NP_634844.1| - 1.5e-11 43.9 0.2 3.4e-11 42.8 0.2 1.6 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain PheRS_DBD1 PF18552.1 gi|21228922|ref|NP_634844.1| - 0.14 11.9 0.0 0.66 9.8 0.0 2.1 2 0 0 2 2 2 0 PheRS DNA binding domain 1 Trp_syntA PF00290.20 gi|21228923|ref|NP_634845.1| - 4.9e-94 314.0 0.1 5.8e-94 313.8 0.1 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PcrB PF01884.17 gi|21228923|ref|NP_634845.1| - 6.9e-05 22.4 0.3 0.0055 16.2 0.2 2.2 2 0 0 2 2 2 1 PcrB family His_biosynth PF00977.21 gi|21228923|ref|NP_634845.1| - 0.00017 21.1 0.2 0.00038 20.0 0.2 1.5 1 0 0 1 1 1 1 Histidine biosynthesis protein PA PF02225.22 gi|21228923|ref|NP_634845.1| - 0.00073 19.5 0.4 0.24 11.5 0.1 2.4 1 1 1 2 2 2 2 PA domain IGPS PF00218.21 gi|21228923|ref|NP_634845.1| - 0.01 15.0 0.0 0.015 14.4 0.0 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase DHO_dh PF01180.21 gi|21228923|ref|NP_634845.1| - 0.018 14.3 0.1 0.03 13.5 0.2 1.3 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase NanE PF04131.14 gi|21228923|ref|NP_634845.1| - 0.021 14.0 0.1 0.067 12.4 0.1 1.8 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase PucR PF07905.11 gi|21228923|ref|NP_634845.1| - 0.075 13.3 0.2 0.46 10.8 0.0 2.3 3 0 0 3 3 3 0 Purine catabolism regulatory protein-like family FMN_dh PF01070.18 gi|21228923|ref|NP_634845.1| - 0.094 11.7 1.3 0.52 9.3 0.4 2.4 3 0 0 3 3 3 0 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|21228923|ref|NP_634845.1| - 0.096 11.7 0.5 2.8 6.8 0.1 2.2 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain PALP PF00291.25 gi|161485666|ref|NP_634846.2| - 1.7e-43 149.1 2.4 2.2e-43 148.7 2.4 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme IGPS PF00218.21 gi|21228925|ref|NP_634847.1| - 2.1e-64 217.1 0.0 2.6e-64 216.9 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase NanE PF04131.14 gi|21228925|ref|NP_634847.1| - 0.00011 21.4 0.0 0.018 14.3 0.0 3.0 3 1 0 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|21228925|ref|NP_634847.1| - 0.0067 15.8 0.0 0.042 13.2 0.0 2.1 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.18 gi|21228925|ref|NP_634847.1| - 0.0072 15.4 0.0 0.015 14.3 0.0 1.4 1 0 0 1 1 1 1 FMN-dependent dehydrogenase His_biosynth PF00977.21 gi|21228925|ref|NP_634847.1| - 0.01 15.3 0.0 0.02 14.4 0.0 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein QRPTase_C PF01729.19 gi|21228925|ref|NP_634847.1| - 0.046 13.5 0.0 0.078 12.8 0.0 1.3 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain DHO_dh PF01180.21 gi|21228925|ref|NP_634847.1| - 0.085 12.0 0.0 0.59 9.3 0.0 2.1 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase IMPDH PF00478.25 gi|21228925|ref|NP_634847.1| - 0.12 11.3 0.0 0.24 10.3 0.0 1.4 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Bac_luciferase PF00296.20 gi|21228926|ref|NP_634848.1| - 1.6e-36 126.3 0.0 1.8e-36 126.2 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase DUF3802 PF12290.8 gi|21228926|ref|NP_634848.1| - 0.21 12.1 0.1 0.46 11.0 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3802) Cyclase PF04199.13 gi|21228927|ref|NP_634849.1| - 3.7e-21 75.8 0.0 4.9e-21 75.4 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase GDE_N_bis PF14742.6 gi|21228928|ref|NP_634850.1| - 9.4e-38 129.7 0.0 1.1e-37 129.5 0.0 1.0 1 0 0 1 1 1 1 N-terminal domain of (some) glycogen debranching enzymes GDE_C PF06202.14 gi|21228929|ref|NP_634851.1| - 1.7e-11 43.7 0.1 3.7e-10 39.3 0.1 2.2 1 1 0 1 1 1 1 Amylo-alpha-1,6-glucosidase Trehalase PF01204.18 gi|21228929|ref|NP_634851.1| - 3.3e-08 32.8 0.0 4.6e-08 32.4 0.0 1.1 1 0 0 1 1 1 1 Trehalase Glyco_hydro_63 PF03200.16 gi|21228929|ref|NP_634851.1| - 0.0026 16.6 0.2 0.33 9.7 0.1 2.2 1 1 1 2 2 2 2 Glycosyl hydrolase family 63 C-terminal domain Bac_rhamnosid6H PF17389.2 gi|21228929|ref|NP_634851.1| - 0.0071 15.6 0.0 0.0096 15.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glyco_hydro_100 PF12899.7 gi|21228929|ref|NP_634851.1| - 0.028 13.1 0.0 1.8 7.1 0.0 2.5 3 0 0 3 3 3 0 Alkaline and neutral invertase Pro_isomerase PF00160.21 gi|21228931|ref|NP_634853.1| - 5.3e-53 179.5 1.1 5.9e-53 179.4 1.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ribonuc_red_lgC PF02867.15 gi|21228932|ref|NP_634854.1| - 3.2e-142 474.7 0.0 1.3e-101 340.8 0.0 3.0 1 1 1 2 2 2 2 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|21228932|ref|NP_634854.1| - 1.4e-14 53.9 0.0 2.9e-14 52.8 0.0 1.6 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain EamA PF00892.20 gi|21228933|ref|NP_634855.1| - 2.7e-30 105.3 32.5 3.3e-16 59.7 8.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family EamA PF00892.20 gi|21228934|ref|NP_634856.1| - 1.5e-30 106.2 32.4 7e-16 58.6 8.0 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|21228934|ref|NP_634856.1| - 4.1e-05 23.1 3.9 7e-05 22.3 3.9 1.5 1 1 0 1 1 1 1 Triose-phosphate Transporter family DUF2070 PF09843.9 gi|21228934|ref|NP_634856.1| - 0.75 8.0 28.4 0.043 12.1 17.2 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) YwiC PF14256.6 gi|21228934|ref|NP_634856.1| - 9.4 6.6 12.4 1.5 9.1 3.4 3.0 1 1 2 3 3 3 0 YwiC-like protein ABC_tran PF00005.27 gi|21228935|ref|NP_634857.1| - 1.8e-31 109.5 0.0 2.5e-31 109.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|21228935|ref|NP_634857.1| - 7.9e-10 38.5 0.0 8.9e-05 22.0 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|21228935|ref|NP_634857.1| - 8e-07 29.2 0.1 0.0063 16.4 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21228935|ref|NP_634857.1| - 0.00015 21.4 0.1 0.00031 20.4 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|21228935|ref|NP_634857.1| - 0.00046 20.6 0.1 0.00097 19.6 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|21228935|ref|NP_634857.1| - 0.00065 19.3 0.0 0.052 13.1 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|21228935|ref|NP_634857.1| - 0.0011 19.3 0.2 0.0063 16.8 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|21228935|ref|NP_634857.1| - 0.0014 18.4 0.0 0.0053 16.5 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain IstB_IS21 PF01695.17 gi|21228935|ref|NP_634857.1| - 0.0017 18.1 0.0 0.16 11.7 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_10 PF12846.7 gi|21228935|ref|NP_634857.1| - 0.0025 16.8 0.0 0.41 9.5 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain AAA_23 PF13476.6 gi|21228935|ref|NP_634857.1| - 0.0048 17.4 0.1 0.0087 16.6 0.1 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|21228935|ref|NP_634857.1| - 0.016 15.1 0.1 0.24 11.3 0.1 2.3 1 1 1 2 2 2 0 NACHT domain RsgA_GTPase PF03193.16 gi|21228935|ref|NP_634857.1| - 0.017 15.1 0.1 0.028 14.3 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 gi|21228935|ref|NP_634857.1| - 0.023 14.4 0.0 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA12 PF10443.9 gi|21228935|ref|NP_634857.1| - 0.025 13.3 0.0 0.081 11.6 0.0 1.7 2 0 0 2 2 2 0 RNA12 protein DUF87 PF01935.17 gi|21228935|ref|NP_634857.1| - 0.028 14.5 0.3 0.063 13.4 0.2 1.6 2 0 0 2 2 1 0 Helicase HerA, central domain AAA_33 PF13671.6 gi|21228935|ref|NP_634857.1| - 0.073 13.2 0.1 0.16 12.1 0.0 1.7 2 0 0 2 2 1 0 AAA domain NB-ARC PF00931.22 gi|21228935|ref|NP_634857.1| - 0.082 12.1 0.2 0.16 11.1 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain MMR_HSR1 PF01926.23 gi|21228935|ref|NP_634857.1| - 0.086 12.9 0.2 0.26 11.4 0.2 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 gi|21228935|ref|NP_634857.1| - 0.11 12.0 0.0 0.21 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 gi|21228935|ref|NP_634857.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.5 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|21228935|ref|NP_634857.1| - 0.12 12.7 0.0 0.32 11.4 0.0 1.8 1 0 0 1 1 1 0 RNA helicase DUF3987 PF13148.6 gi|21228935|ref|NP_634857.1| - 0.15 11.1 0.0 0.24 10.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Cytidylate_kin PF02224.18 gi|21228935|ref|NP_634857.1| - 0.15 11.8 0.5 0.42 10.3 0.2 1.9 1 1 1 2 2 2 0 Cytidylate kinase AAA_18 PF13238.6 gi|21228935|ref|NP_634857.1| - 0.19 12.3 0.5 0.37 11.3 0.2 1.7 2 1 0 2 2 1 0 AAA domain DUF296 PF03479.15 gi|21228936|ref|NP_634858.1| - 1.9e-13 50.7 0.0 2.2e-13 50.5 0.0 1.1 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain TrmB PF01978.19 gi|21228937|ref|NP_634859.1| - 0.0011 18.8 0.0 0.0024 17.7 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|21228937|ref|NP_634859.1| - 0.007 16.3 0.6 0.016 15.2 0.0 1.9 3 0 0 3 3 3 1 Transcriptional regulator PadR-like family SMC_ScpB PF04079.16 gi|21228937|ref|NP_634859.1| - 0.028 14.0 0.0 0.039 13.6 0.0 1.4 1 1 0 1 1 1 0 Segregation and condensation complex subunit ScpB Enolase_C PF00113.22 gi|21228938|ref|NP_634860.1| - 2.8e-116 387.9 0.8 3.7e-116 387.5 0.8 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|21228938|ref|NP_634860.1| - 1.4e-61 206.4 0.0 2.9e-61 205.4 0.0 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|21228938|ref|NP_634860.1| - 2.9e-05 23.7 0.0 4.6e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|21228938|ref|NP_634860.1| - 0.0046 16.2 0.0 0.0095 15.1 0.0 1.5 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus Transposase_20 PF02371.16 gi|21228939|ref|NP_634861.1| - 1.4e-28 99.0 0.0 3.6e-28 97.7 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|21228939|ref|NP_634861.1| - 9.1e-20 71.1 0.2 2e-19 70.0 0.2 1.6 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.12 gi|21228939|ref|NP_634861.1| - 0.026 14.8 0.0 0.082 13.2 0.0 1.9 1 0 0 1 1 1 0 Orthopoxvirus F14 protein 5_3_exonuc PF01367.20 gi|21228939|ref|NP_634861.1| - 0.2 12.3 2.6 3.2 8.4 0.7 3.3 2 1 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold SecY PF00344.20 gi|21228940|ref|NP_634862.1| - 0.17 11.1 0.0 0.18 11.1 0.0 1.0 1 0 0 1 1 1 0 SecY translocase AAA_5 PF07728.14 gi|21228941|ref|NP_634863.1| - 4.7e-26 91.4 0.0 9.6e-26 90.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_8 PF17868.1 gi|21228941|ref|NP_634863.1| - 5.5e-19 67.8 1.5 5.5e-19 67.8 1.5 2.0 2 0 0 2 2 2 1 AAA lid domain AAA_3 PF07726.11 gi|21228941|ref|NP_634863.1| - 4.2e-05 23.4 0.0 0.00033 20.5 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 gi|21228941|ref|NP_634863.1| - 8.4e-05 23.0 0.0 0.00027 21.4 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 gi|21228941|ref|NP_634863.1| - 0.013 15.2 0.0 0.027 14.2 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|21228941|ref|NP_634863.1| - 0.022 14.1 0.0 0.07 12.5 0.0 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI HypA PF01155.19 gi|21228941|ref|NP_634863.1| - 0.031 14.3 1.0 0.17 11.9 0.2 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AAA_16 PF13191.6 gi|21228941|ref|NP_634863.1| - 0.036 14.4 0.7 0.17 12.3 0.0 2.4 2 2 0 2 2 2 0 AAA ATPase domain MCM PF00493.23 gi|21228941|ref|NP_634863.1| - 0.087 11.9 0.0 0.38 9.8 0.0 2.0 3 0 0 3 3 3 0 MCM P-loop domain SCA7 PF08313.12 gi|21228941|ref|NP_634863.1| - 0.17 11.8 0.0 0.39 10.6 0.0 1.5 1 0 0 1 1 1 0 SCA7, zinc-binding domain VWA_2 PF13519.6 gi|21228942|ref|NP_634864.1| - 1.5e-10 41.6 0.2 3.4e-10 40.5 0.2 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|21228942|ref|NP_634864.1| - 9.6e-07 28.4 0.0 1.8e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.28 gi|21228942|ref|NP_634864.1| - 1.4e-06 28.7 0.2 3.2e-06 27.5 0.2 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|21228942|ref|NP_634864.1| - 2.1e-05 24.5 0.0 0.00048 20.1 0.0 2.3 2 0 0 2 2 2 1 von Willebrand factor type A domain TPP_enzyme_N PF02776.18 gi|21228943|ref|NP_634865.1| - 2.6e-48 163.9 0.0 1.1e-47 161.9 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|21228943|ref|NP_634865.1| - 9.3e-40 135.9 0.1 1.5e-38 132.0 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|21228943|ref|NP_634865.1| - 3.7e-30 104.5 0.0 6.9e-30 103.6 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Pyridox_ox_2 PF12900.7 gi|21228944|ref|NP_634866.1| - 2.7e-25 89.0 0.0 3.1e-25 88.8 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|21228944|ref|NP_634866.1| - 2.3e-06 27.7 0.0 3.6e-06 27.1 0.0 1.4 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF1845 PF08900.11 gi|21228944|ref|NP_634866.1| - 0.011 15.5 0.0 0.032 14.0 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1845) DUF3792 PF12670.7 gi|21228946|ref|NP_634868.1| - 0.017 15.3 11.5 0.017 15.3 11.5 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3792) SET PF00856.28 gi|21228947|ref|NP_634869.1| - 5.1e-16 59.5 0.4 6e-15 56.0 0.4 1.9 1 1 0 1 1 1 1 SET domain TTD PF12148.8 gi|21228947|ref|NP_634869.1| - 0.081 12.8 0.1 0.15 12.0 0.1 1.4 2 0 0 2 2 2 0 Tandem tudor domain within UHRF1 AA_permease_2 PF13520.6 gi|21228948|ref|NP_634870.1| - 3e-26 92.3 48.1 3.7e-26 91.9 48.1 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|21228948|ref|NP_634870.1| - 5.3e-20 71.5 40.1 7.2e-20 71.0 40.1 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|21228949|ref|NP_634871.1| - 1.1e-24 87.1 46.6 1.5e-24 86.7 46.6 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|21228949|ref|NP_634871.1| - 1.1e-19 70.4 38.5 1.8e-19 69.8 38.5 1.2 1 0 0 1 1 1 1 Amino acid permease DUF1474 PF07342.11 gi|21228950|ref|NP_634872.1| - 0.095 13.2 2.3 0.46 11.0 0.6 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF1474) TauE PF01925.19 gi|21228951|ref|NP_634873.1| - 2.5e-48 164.8 31.2 2.9e-48 164.6 31.2 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE V4R PF02830.18 gi|21228951|ref|NP_634873.1| - 0.069 13.2 0.3 0.5 10.4 0.0 2.1 2 0 0 2 2 2 0 V4R domain MacB_PCD PF12704.7 gi|21228952|ref|NP_634874.1| - 3.9e-17 63.3 2.1 5.7e-17 62.7 2.1 1.3 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|21228952|ref|NP_634874.1| - 2.5e-15 56.7 3.3 2.5e-15 56.7 3.3 3.1 3 0 0 3 3 3 1 FtsX-like permease family Promethin PF16015.5 gi|21228952|ref|NP_634874.1| - 3.3 7.7 9.7 0.54 10.2 2.4 2.4 2 0 0 2 2 2 0 Promethin MarR PF01047.22 gi|21228953|ref|NP_634875.1| - 9.1e-14 51.1 0.0 2.2e-13 49.9 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21228953|ref|NP_634875.1| - 6.6e-10 39.3 0.0 1.1e-09 38.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|21228953|ref|NP_634875.1| - 5.7e-08 32.5 0.0 9.8e-08 31.8 0.0 1.4 1 0 0 1 1 1 1 MarR family HxlR PF01638.17 gi|21228953|ref|NP_634875.1| - 7.5e-05 22.5 0.0 0.00016 21.5 0.0 1.5 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_IclR PF09339.10 gi|21228953|ref|NP_634875.1| - 0.00069 19.4 0.0 0.0015 18.3 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_45 PF14947.6 gi|21228953|ref|NP_634875.1| - 0.0009 19.2 0.0 0.0018 18.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.19 gi|21228953|ref|NP_634875.1| - 0.0028 17.5 0.1 0.0076 16.1 0.0 1.8 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|21228953|ref|NP_634875.1| - 0.0031 17.7 0.0 0.0061 16.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain SMC_ScpB PF04079.16 gi|21228953|ref|NP_634875.1| - 0.0086 15.7 0.0 0.014 15.1 0.0 1.4 1 1 0 1 1 1 1 Segregation and condensation complex subunit ScpB HTH_Crp_2 PF13545.6 gi|21228953|ref|NP_634875.1| - 0.01 15.8 0.0 0.026 14.5 0.0 1.9 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF4364 PF14277.6 gi|21228953|ref|NP_634875.1| - 0.043 13.5 0.0 0.073 12.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DUF4754 PF15946.5 gi|21228953|ref|NP_634875.1| - 0.052 13.8 0.2 9.2 6.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4754) FtsK_gamma PF09397.10 gi|21228953|ref|NP_634875.1| - 0.064 13.1 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Ftsk gamma domain Fe_dep_repress PF01325.19 gi|21228953|ref|NP_634875.1| - 0.098 12.9 0.1 0.44 10.8 0.0 2.1 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain PadR PF03551.14 gi|21228953|ref|NP_634875.1| - 0.12 12.4 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DUF3116 PF11313.8 gi|21228953|ref|NP_634875.1| - 0.12 12.2 0.0 0.31 10.9 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3116) FeoC PF09012.10 gi|21228953|ref|NP_634875.1| - 0.16 12.1 0.3 1 9.4 0.0 2.3 2 1 1 3 3 3 0 FeoC like transcriptional regulator MMPL PF03176.15 gi|21228954|ref|NP_634876.1| - 1.8e-61 207.9 11.0 1.3e-30 106.5 2.3 2.2 2 0 0 2 2 2 2 MMPL family ACR_tran PF00873.19 gi|21228954|ref|NP_634876.1| - 8.3e-11 40.3 28.6 2.3e-06 25.6 10.0 2.2 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family Sterol-sensing PF12349.8 gi|21228954|ref|NP_634876.1| - 2.5e-10 40.4 17.1 1.6e-06 28.1 5.2 2.5 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation Patched PF02460.18 gi|21228954|ref|NP_634876.1| - 3.5e-10 38.7 16.4 1.7e-05 23.1 9.3 2.3 2 0 0 2 2 2 2 Patched family SecD_SecF PF02355.16 gi|21228954|ref|NP_634876.1| - 1.3e-09 37.7 10.9 1.3e-09 37.7 10.9 2.9 2 1 0 2 2 2 1 Protein export membrane protein MarR PF01047.22 gi|21228955|ref|NP_634877.1| - 1.1e-10 41.3 0.1 1.8e-10 40.6 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21228955|ref|NP_634877.1| - 1.1e-08 35.5 0.3 2.6e-08 34.2 0.1 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|21228955|ref|NP_634877.1| - 1.3e-07 31.4 0.0 2.9e-07 30.3 0.0 1.6 2 0 0 2 2 2 1 MarR family B-block_TFIIIC PF04182.12 gi|21228955|ref|NP_634877.1| - 0.0012 19.0 0.0 0.0025 17.9 0.0 1.7 1 1 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_34 PF13601.6 gi|21228955|ref|NP_634877.1| - 0.0015 18.6 0.1 0.0032 17.6 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|21228955|ref|NP_634877.1| - 0.0049 16.8 0.8 0.0082 16.1 0.3 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix FtsK_gamma PF09397.10 gi|21228955|ref|NP_634877.1| - 0.023 14.5 0.0 0.053 13.3 0.0 1.6 1 0 0 1 1 1 0 Ftsk gamma domain HxlR PF01638.17 gi|21228955|ref|NP_634877.1| - 0.024 14.4 0.1 0.06 13.2 0.0 1.7 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_IclR PF09339.10 gi|21228955|ref|NP_634877.1| - 0.051 13.4 0.0 0.14 12.0 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain TrmB PF01978.19 gi|21228955|ref|NP_634877.1| - 0.051 13.5 0.0 0.18 11.7 0.0 1.9 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_54 PF18607.1 gi|21228955|ref|NP_634877.1| - 0.065 13.3 0.1 0.33 11.0 0.1 2.0 2 1 0 2 2 2 0 ParA helix turn helix domain HTH_Crp_2 PF13545.6 gi|21228955|ref|NP_634877.1| - 0.069 13.1 0.5 0.18 11.8 0.0 2.0 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain DUF4363 PF14276.6 gi|21228955|ref|NP_634877.1| - 0.069 13.3 0.2 0.13 12.4 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4363) PAP_central PF04928.17 gi|21228955|ref|NP_634877.1| - 0.086 11.8 0.1 0.11 11.5 0.1 1.1 1 0 0 1 1 1 0 Poly(A) polymerase central domain TrmB PF01978.19 gi|21228956|ref|NP_634878.1| - 3e-24 84.7 0.0 4.1e-24 84.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|21228956|ref|NP_634878.1| - 1.9e-06 27.5 0.0 4.6e-06 26.3 0.0 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|21228956|ref|NP_634878.1| - 0.0019 18.1 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|21228956|ref|NP_634878.1| - 0.0034 17.3 0.0 0.0061 16.5 0.0 1.4 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|21228956|ref|NP_634878.1| - 0.0035 17.6 0.1 0.007 16.7 0.0 1.4 2 0 0 2 2 1 1 Transcriptional regulator HTH_5 PF01022.20 gi|21228956|ref|NP_634878.1| - 0.0066 16.3 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family PadR PF03551.14 gi|21228956|ref|NP_634878.1| - 0.033 14.2 0.1 3.7 7.6 0.0 2.2 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|21228956|ref|NP_634878.1| - 0.046 13.3 0.0 0.095 12.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 gi|21228956|ref|NP_634878.1| - 0.054 13.3 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain HTH_34 PF13601.6 gi|21228956|ref|NP_634878.1| - 0.13 12.5 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|21228956|ref|NP_634878.1| - 0.14 12.3 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|21228956|ref|NP_634878.1| - 0.14 12.5 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor AI-2E_transport PF01594.16 gi|21228957|ref|NP_634879.1| - 1.7e-40 139.2 15.0 1.9e-40 139.0 15.0 1.0 1 0 0 1 1 1 1 AI-2E family transporter ABC_tran PF00005.27 gi|21228958|ref|NP_634880.1| - 2.8e-25 89.4 0.0 3.8e-25 89.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|21228958|ref|NP_634880.1| - 2.3e-09 37.5 0.5 7.1e-05 22.7 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|21228958|ref|NP_634880.1| - 1.4e-05 25.0 0.8 0.01 15.6 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|21228958|ref|NP_634880.1| - 0.00069 20.2 0.3 0.0016 19.0 0.3 1.5 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|21228958|ref|NP_634880.1| - 0.0068 15.9 0.2 0.67 9.4 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|21228958|ref|NP_634880.1| - 0.021 14.6 0.3 0.037 13.8 0.3 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|21228958|ref|NP_634880.1| - 0.03 14.8 0.0 0.052 14.0 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.6 gi|21228958|ref|NP_634880.1| - 0.048 12.3 0.7 3.7 6.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|21228958|ref|NP_634880.1| - 0.05 13.3 0.1 0.091 12.5 0.0 1.4 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|21228958|ref|NP_634880.1| - 0.052 12.9 0.1 0.076 12.4 0.1 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|21228958|ref|NP_634880.1| - 0.064 13.6 0.1 0.16 12.3 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 gi|21228958|ref|NP_634880.1| - 0.12 12.4 0.2 6.1 6.9 0.1 2.2 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|21228958|ref|NP_634880.1| - 0.14 12.4 0.0 0.25 11.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain KAP_NTPase PF07693.14 gi|21228958|ref|NP_634880.1| - 0.19 10.9 0.0 0.19 10.9 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain Ion_trans_2 PF07885.16 gi|21228960|ref|NP_634882.1| - 1.4e-23 82.6 10.8 1.8e-23 82.3 10.8 1.1 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 gi|21228960|ref|NP_634882.1| - 0.00064 19.0 1.0 0.00097 18.4 1.0 1.4 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 gi|21228960|ref|NP_634882.1| - 0.025 14.4 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 Ligand-gated ion channel ABC_membrane PF00664.23 gi|21228960|ref|NP_634882.1| - 0.034 13.8 0.0 0.054 13.1 0.0 1.4 1 1 0 1 1 1 0 ABC transporter transmembrane region DUF3139 PF11337.8 gi|21228960|ref|NP_634882.1| - 0.064 13.9 0.2 0.12 13.1 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) DUF2099 PF09872.9 gi|21228961|ref|NP_634883.1| - 1.9e-110 368.1 2.5 2.2e-110 367.9 2.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Sacchrp_dh_NADP PF03435.18 gi|21228961|ref|NP_634883.1| - 0.025 14.8 0.3 0.044 14.0 0.3 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain MTH865 PF07747.11 gi|21228962|ref|NP_634884.1| - 2.2e-29 101.0 0.0 2.5e-29 100.9 0.0 1.0 1 0 0 1 1 1 1 MTH865-like family HTH_20 PF12840.7 gi|21228963|ref|NP_634885.1| - 6.2e-06 26.2 0.3 2.6e-05 24.2 0.1 2.2 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|21228963|ref|NP_634885.1| - 6.6e-05 22.8 0.2 0.00026 20.9 0.1 2.1 1 1 1 2 2 2 1 Winged helix-turn-helix HTH_5 PF01022.20 gi|21228963|ref|NP_634885.1| - 0.0012 18.7 0.7 0.0029 17.4 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_12 PF08461.10 gi|21228963|ref|NP_634885.1| - 0.031 14.2 0.7 0.23 11.4 0.2 2.5 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain Mrr_N PF14338.6 gi|21228963|ref|NP_634885.1| - 0.052 13.7 0.2 0.22 11.7 0.0 2.2 2 0 0 2 2 2 0 Mrr N-terminal domain Ubiq_cyt_C_chap PF03981.12 gi|21228963|ref|NP_634885.1| - 0.053 13.6 0.1 0.097 12.8 0.1 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone DUF2099 PF09872.9 gi|21228964|ref|NP_634886.1| - 1.1e-115 385.3 0.9 1.2e-115 385.1 0.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Usp PF00582.26 gi|21228964|ref|NP_634886.1| - 0.033 14.7 0.3 0.057 13.9 0.3 1.4 1 0 0 1 1 1 0 Universal stress protein family Beta_helix PF13229.6 gi|21228966|ref|NP_634888.1| - 2.4e-11 43.8 23.0 3.7e-10 39.9 18.4 2.2 1 1 1 2 2 2 2 Right handed beta helix region Glyco_hydro_28 PF00295.17 gi|21228966|ref|NP_634888.1| - 1.6e-05 24.2 2.9 3.3e-05 23.1 2.9 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 DUF1565 PF07602.11 gi|21228966|ref|NP_634888.1| - 0.046 13.0 11.3 0.63 9.3 11.3 2.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1565) AMP-binding_C_2 PF14535.6 gi|21228969|ref|NP_634891.1| - 5.8e-29 100.2 0.4 1.3e-28 99.2 0.4 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|21228969|ref|NP_634891.1| - 5.6e-16 58.2 0.0 2.1e-15 56.3 0.0 1.8 1 1 0 1 1 1 1 AMP-binding enzyme PKD PF00801.20 gi|21228970|ref|NP_634892.1| - 3.7e-05 23.5 0.1 6.1e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 PKD domain NnrU PF07298.11 gi|21228971|ref|NP_634893.1| - 1.3e-07 31.4 3.8 2.2e-07 30.6 3.8 1.3 1 1 0 1 1 1 1 NnrU protein PEMT PF04191.13 gi|21228971|ref|NP_634893.1| - 0.0025 18.2 0.1 0.0047 17.3 0.1 1.6 1 0 0 1 1 1 1 Phospholipid methyltransferase Peptidase_S55 PF05580.12 gi|21228972|ref|NP_634894.1| - 0.15 12.0 0.2 0.34 10.8 0.1 1.6 2 0 0 2 2 2 0 SpoIVB peptidase S55 DUF1294 PF06961.13 gi|21228973|ref|NP_634895.1| - 4.1e-22 78.2 0.1 5.7e-22 77.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1294) Wzy_C_2 PF11846.8 gi|21228973|ref|NP_634895.1| - 0.015 15.2 0.2 0.022 14.7 0.1 1.3 1 1 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal Rubrerythrin PF02915.17 gi|21228974|ref|NP_634896.1| - 2.1e-07 31.4 1.9 2.6e-07 31.1 1.9 1.1 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.10 gi|21228974|ref|NP_634896.1| - 0.00052 20.3 0.6 0.00066 20.0 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) DUF4142 PF13628.6 gi|21228974|ref|NP_634896.1| - 0.00065 20.0 0.3 0.00089 19.5 0.0 1.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4142) COQ7 PF03232.13 gi|21228974|ref|NP_634896.1| - 0.00073 19.3 0.2 0.00088 19.1 0.2 1.1 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 DUF2202 PF09968.9 gi|21228974|ref|NP_634896.1| - 0.012 15.5 0.8 0.019 14.8 0.8 1.5 1 1 0 1 1 1 0 Uncharacterized protein domain (DUF2202) GSDH PF07995.11 gi|21228975|ref|NP_634897.1| - 2.7e-20 72.9 0.0 1.1e-19 71.0 0.0 2.0 2 1 0 2 2 2 1 Glucose / Sorbosone dehydrogenase NHL PF01436.21 gi|21228975|ref|NP_634897.1| - 0.00026 20.9 0.2 1.2 9.3 0.0 3.3 3 0 0 3 3 3 2 NHL repeat SGL PF08450.12 gi|21228975|ref|NP_634897.1| - 0.0022 17.6 0.0 0.014 15.0 0.0 2.2 2 1 0 2 2 2 1 SMP-30/Gluconolactonase/LRE-like region ATP-synt_10 PF05176.14 gi|21228976|ref|NP_634898.1| - 4e-14 52.5 0.0 4.5e-14 52.3 0.0 1.0 1 0 0 1 1 1 1 ATP10 protein IMS PF00817.20 gi|21228978|ref|NP_634900.1| - 6.2e-44 149.6 0.0 9e-44 149.1 0.0 1.3 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 gi|21228978|ref|NP_634900.1| - 1.1e-16 61.6 0.4 2.1e-16 60.7 0.4 1.4 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|21228978|ref|NP_634900.1| - 2.3e-10 40.2 0.0 6.5e-10 38.8 0.0 1.9 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.6 gi|21228978|ref|NP_634900.1| - 0.0001 22.8 0.0 0.00058 20.4 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|21228978|ref|NP_634900.1| - 0.00023 21.4 0.0 0.0005 20.3 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus DUF4332 PF14229.6 gi|21228978|ref|NP_634900.1| - 0.0072 16.6 0.0 0.014 15.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) DUF1805 PF08827.11 gi|21228978|ref|NP_634900.1| - 0.028 14.8 0.0 21 5.5 0.0 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF1805) AI-2E_transport PF01594.16 gi|21228979|ref|NP_634901.1| - 2.4e-39 135.4 49.3 2.9e-39 135.1 49.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter Pam17 PF08566.10 gi|21228979|ref|NP_634901.1| - 0.85 9.4 2.0 2.9 7.7 0.1 2.6 3 0 0 3 3 3 0 Mitochondrial import protein Pam17 SDH_sah PF01972.16 gi|21228980|ref|NP_634902.1| - 3.9e-75 252.5 0.4 4.3e-75 252.4 0.4 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.23 gi|21228980|ref|NP_634902.1| - 0.00035 20.5 0.0 0.0021 18.0 0.0 2.0 2 0 0 2 2 2 1 Clp protease Peptidase_S49 PF01343.18 gi|21228980|ref|NP_634902.1| - 0.00091 19.2 0.0 0.0019 18.1 0.0 1.5 1 0 0 1 1 1 1 Peptidase family S49 ECH_1 PF00378.20 gi|21228980|ref|NP_634902.1| - 0.026 13.9 0.0 0.87 8.8 0.0 2.1 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase TPR_12 PF13424.6 gi|21228981|ref|NP_634903.1| - 6.9e-78 257.0 16.7 2.6e-23 82.1 0.3 5.3 3 2 1 5 5 5 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21228981|ref|NP_634903.1| - 6.8e-72 235.6 9.0 3.9e-12 45.6 0.0 7.7 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21228981|ref|NP_634903.1| - 7e-47 155.4 13.6 6e-08 32.2 0.1 8.2 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21228981|ref|NP_634903.1| - 6.5e-43 141.7 14.9 8.9e-08 31.7 0.0 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21228981|ref|NP_634903.1| - 2.6e-37 123.9 14.4 5.7e-05 22.9 0.1 8.2 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21228981|ref|NP_634903.1| - 3.9e-31 104.6 17.5 0.0004 20.4 0.0 8.1 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21228981|ref|NP_634903.1| - 2.3e-15 56.9 2.3 0.0011 19.5 0.1 6.4 3 3 2 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21228981|ref|NP_634903.1| - 1.1e-14 53.7 13.3 0.0059 16.3 0.1 7.8 7 1 1 8 8 8 3 TPR repeat TPR_MalT PF17874.1 gi|21228981|ref|NP_634903.1| - 4.2e-14 52.7 1.2 8.8e-07 28.6 1.1 3.0 2 1 1 3 3 3 2 MalT-like TPR region TPR_14 PF13428.6 gi|21228981|ref|NP_634903.1| - 2.6e-13 49.6 3.8 0.7 10.9 0.1 7.3 5 3 2 8 8 7 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21228981|ref|NP_634903.1| - 5.5e-12 45.2 10.1 0.1 13.1 0.0 8.1 8 4 0 8 8 6 2 Tetratricopeptide repeat SNAP PF14938.6 gi|21228981|ref|NP_634903.1| - 6.3e-12 45.5 0.0 0.00028 20.4 0.0 3.2 2 1 1 3 3 3 3 Soluble NSF attachment protein, SNAP TPR_19 PF14559.6 gi|21228981|ref|NP_634903.1| - 4.3e-11 43.2 6.7 0.088 13.3 0.0 5.7 2 2 4 6 6 6 3 Tetratricopeptide repeat MIT PF04212.18 gi|21228981|ref|NP_634903.1| - 7.1e-09 35.6 14.0 0.052 13.6 0.1 6.8 5 2 2 7 7 7 1 MIT (microtubule interacting and transport) domain 14-3-3 PF00244.20 gi|21228981|ref|NP_634903.1| - 4.4e-08 32.9 1.7 0.074 12.5 0.0 4.1 2 1 2 4 4 4 2 14-3-3 protein TPR_6 PF13174.6 gi|21228981|ref|NP_634903.1| - 4.1e-07 30.2 11.1 3.8 8.3 0.0 7.2 7 2 0 7 7 7 2 Tetratricopeptide repeat DUF2225 PF09986.9 gi|21228981|ref|NP_634903.1| - 8.4e-06 25.7 5.1 0.046 13.4 0.1 3.7 1 1 3 4 4 4 2 Uncharacterized protein conserved in bacteria (DUF2225) TPR_5 PF12688.7 gi|21228981|ref|NP_634903.1| - 8.5e-06 26.0 3.1 1.3 9.3 0.1 4.9 4 3 0 4 4 4 2 Tetratrico peptide repeat SHNi-TPR PF10516.9 gi|21228981|ref|NP_634903.1| - 1.8e-05 24.1 5.6 4.2 6.9 0.0 6.7 7 0 0 7 7 7 1 SHNi-TPR RPN7 PF10602.9 gi|21228981|ref|NP_634903.1| - 2.2e-05 24.2 3.1 2.7 7.7 0.0 4.8 1 1 3 5 5 5 1 26S proteasome subunit RPN7 TPR_3 PF07720.12 gi|21228981|ref|NP_634903.1| - 0.0003 20.7 2.0 15 5.7 0.0 4.8 5 0 0 5 5 5 0 Tetratricopeptide repeat DUF5113 PF17140.4 gi|21228981|ref|NP_634903.1| - 0.00051 19.9 2.3 16 5.3 0.0 4.9 3 1 2 5 5 5 0 Domain of unknown function (DUF5113) PPR PF01535.20 gi|21228981|ref|NP_634903.1| - 0.00059 19.9 11.3 1.5 9.2 0.0 7.2 9 0 0 9 9 7 1 PPR repeat ANAPC3 PF12895.7 gi|21228981|ref|NP_634903.1| - 0.00082 19.6 5.9 3.8 7.8 0.5 4.8 2 2 2 5 5 4 1 Anaphase-promoting complex, cyclosome, subunit 3 DUF4404 PF14357.6 gi|21228981|ref|NP_634903.1| - 0.0014 19.2 0.2 8.5 7.1 0.0 4.3 6 0 0 6 6 4 0 Domain of unknown function (DUF4404) TPR_21 PF09976.9 gi|21228981|ref|NP_634903.1| - 0.002 17.9 1.0 2 8.1 0.1 3.8 1 1 3 4 4 4 1 Tetratricopeptide repeat-like domain RNA_pol_Rpb6 PF01192.22 gi|21228981|ref|NP_634903.1| - 0.0042 17.0 1.4 0.076 13.0 0.0 3.2 3 1 0 3 3 2 1 RNA polymerase Rpb6 TAtT PF16811.5 gi|21228981|ref|NP_634903.1| - 0.0048 16.2 3.2 2.3 7.4 0.1 4.9 2 1 4 6 6 6 1 TRAP transporter T-component TPR_15 PF13429.6 gi|21228981|ref|NP_634903.1| - 0.0065 15.7 1.7 0.48 9.6 0.5 3.6 4 1 0 4 4 4 1 Tetratricopeptide repeat Vps39_1 PF10366.9 gi|21228981|ref|NP_634903.1| - 0.0078 16.5 6.8 0.77 10.1 0.1 4.7 3 1 2 5 5 5 1 Vacuolar sorting protein 39 domain 1 HHH_8 PF14716.6 gi|21228981|ref|NP_634903.1| - 0.021 15.2 2.0 67 4.0 0.0 5.1 5 1 1 6 6 5 0 Helix-hairpin-helix domain RPN6_N PF18055.1 gi|21228981|ref|NP_634903.1| - 0.021 15.2 1.9 0.61 10.5 0.5 2.9 1 1 1 2 2 2 0 26S proteasome regulatory subunit RPN6 N-terminal domain ComR_TPR PF18710.1 gi|21228981|ref|NP_634903.1| - 0.024 14.2 0.1 0.17 11.4 0.1 2.3 3 0 0 3 3 2 0 ComR tetratricopeptide TPR_20 PF14561.6 gi|21228981|ref|NP_634903.1| - 0.041 14.2 0.3 19 5.6 0.0 3.4 2 1 0 3 3 2 0 Tetratricopeptide repeat EspB_PE PF18625.1 gi|21228981|ref|NP_634903.1| - 0.045 14.2 0.2 13 6.4 0.0 2.9 2 1 1 3 3 2 0 ESX-1 secreted protein B PE domain Arm_3 PF16186.5 gi|21228981|ref|NP_634903.1| - 0.088 12.4 1.1 4 7.1 0.1 3.7 4 0 0 4 4 4 0 Atypical Arm repeat SPO22 PF08631.10 gi|21228981|ref|NP_634903.1| - 0.23 10.9 2.1 16 4.9 0.4 2.8 1 1 0 1 1 1 0 Meiosis protein SPO22/ZIP4 like Response_reg PF00072.24 gi|21228982|ref|NP_634904.1| - 2.2e-30 105.1 0.1 2.6e-30 104.9 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.24 gi|21228983|ref|NP_634905.1| - 1.8e-40 137.6 3.9 3.5e-19 69.0 1.3 2.6 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.26 gi|21228983|ref|NP_634905.1| - 7e-33 113.5 0.3 1.6e-32 112.3 0.3 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|21228983|ref|NP_634905.1| - 1.9e-18 66.2 0.6 7.7e-18 64.3 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 gi|21228983|ref|NP_634905.1| - 4.4e-17 62.2 0.0 3.5e-07 30.4 0.1 3.1 2 0 0 2 2 2 2 PAS domain PAS_8 PF13188.7 gi|21228983|ref|NP_634905.1| - 1.3e-13 50.6 0.0 1.6e-06 28.0 0.0 2.8 2 0 0 2 2 2 2 PAS domain PAS PF00989.25 gi|21228983|ref|NP_634905.1| - 3.5e-11 43.1 0.0 1.2e-05 25.2 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS_3 PF08447.12 gi|21228983|ref|NP_634905.1| - 4e-06 27.0 0.0 0.00022 21.4 0.0 2.7 2 0 0 2 2 2 1 PAS fold PAS_4 PF08448.10 gi|21228983|ref|NP_634905.1| - 5.2e-05 23.5 0.0 0.2 11.9 0.0 2.5 2 0 0 2 2 2 2 PAS fold HATPase_c_3 PF13589.6 gi|21228983|ref|NP_634905.1| - 0.032 14.1 0.0 0.071 12.9 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPPT PF01715.17 gi|21228983|ref|NP_634905.1| - 0.15 11.8 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 IPP transferase TaqI_C PF12950.7 gi|21228984|ref|NP_634906.1| - 0.0017 18.5 0.5 0.0048 17.0 0.5 1.8 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain DUF72 PF01904.18 gi|21228985|ref|NP_634907.1| - 5e-34 118.3 0.7 6.1e-34 118.1 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 SmpA_OmlA PF04355.13 gi|21228985|ref|NP_634907.1| - 0.7 9.7 2.8 0.69 9.7 0.2 2.0 2 0 0 2 2 2 0 SmpA / OmlA family TrkA_N PF02254.18 gi|21228986|ref|NP_634908.1| - 0.1 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain Peptidase_M23 PF01551.22 gi|21228987|ref|NP_634909.1| - 7.7e-14 51.7 0.0 1.9e-13 50.4 0.0 1.6 1 1 0 1 1 1 1 Peptidase family M23 Gal-bind_lectin PF00337.22 gi|21228987|ref|NP_634909.1| - 0.062 12.8 0.0 0.082 12.4 0.0 1.2 1 0 0 1 1 1 0 Galactoside-binding lectin HisKA_2 PF07568.12 gi|21228988|ref|NP_634910.1| - 1.7e-31 108.1 1.4 4.4e-31 106.8 1.4 1.8 1 0 0 1 1 1 1 Histidine kinase GAF_3 PF13492.6 gi|21228988|ref|NP_634910.1| - 2.7e-19 69.8 0.0 5.7e-19 68.7 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.10 gi|21228988|ref|NP_634910.1| - 1.3e-10 41.5 0.0 1.6e-08 34.7 0.0 2.5 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.26 gi|21228988|ref|NP_634910.1| - 8.6e-10 39.1 0.4 3.3e-09 37.2 0.1 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.6 gi|21228988|ref|NP_634910.1| - 1e-08 35.5 0.0 2.1e-08 34.6 0.0 1.5 1 0 0 1 1 1 1 GAF domain PAS PF00989.25 gi|21228988|ref|NP_634910.1| - 6.2e-07 29.4 0.0 6.4e-05 22.9 0.0 3.3 3 0 0 3 3 3 1 PAS fold GAF PF01590.26 gi|21228988|ref|NP_634910.1| - 0.00011 22.9 0.0 0.0002 22.0 0.0 1.5 1 0 0 1 1 1 1 GAF domain HWE_HK PF07536.14 gi|21228988|ref|NP_634910.1| - 0.0002 22.0 0.1 0.00059 20.5 0.1 1.8 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|21228988|ref|NP_634910.1| - 0.0085 16.0 0.1 0.024 14.6 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain PAS_9 PF13426.7 gi|21228988|ref|NP_634910.1| - 0.038 14.3 1.6 0.6 10.4 0.1 3.4 3 2 0 3 3 3 0 PAS domain dCache_1 PF02743.18 gi|21228988|ref|NP_634910.1| - 0.13 12.1 0.2 0.55 10.0 0.0 2.2 2 0 0 2 2 2 0 Cache domain Peptidase_M3_N PF08439.10 gi|21228988|ref|NP_634910.1| - 0.17 12.2 3.1 0.71 10.2 3.1 2.1 1 0 0 1 1 1 0 Oligopeptidase F CSN7a_helixI PF18392.1 gi|21228988|ref|NP_634910.1| - 0.2 11.6 0.7 0.64 10.0 0.7 1.9 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain Golgin_A5 PF09787.9 gi|21228988|ref|NP_634910.1| - 0.55 9.6 10.4 0.093 12.2 3.1 2.3 2 0 0 2 2 2 0 Golgin subfamily A member 5 CREPT PF16566.5 gi|21228988|ref|NP_634910.1| - 0.56 10.4 7.6 0.054 13.7 1.4 2.4 2 1 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour HhH-GPD PF00730.25 gi|21228990|ref|NP_634912.1| - 4.2e-16 59.3 0.0 5.7e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|21228990|ref|NP_634912.1| - 8.9e-06 25.3 0.0 2e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|21228990|ref|NP_634912.1| - 0.044 14.4 0.1 0.17 12.6 0.0 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|21228990|ref|NP_634912.1| - 0.094 12.8 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif PsiE PF06146.12 gi|21228991|ref|NP_634913.1| - 2.5e-11 43.8 5.6 2.5e-11 43.8 5.6 2.0 2 1 0 2 2 2 1 Phosphate-starvation-inducible E DUF3397 PF11877.8 gi|21228991|ref|NP_634913.1| - 0.21 11.8 10.5 0.044 14.0 2.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3397) Phage_Coat_Gp8 PF05371.12 gi|21228991|ref|NP_634913.1| - 0.28 11.0 1.0 0.96 9.3 0.3 2.2 2 0 0 2 2 2 0 Phage major coat protein, Gp8 DUF3852 PF12963.7 gi|21228991|ref|NP_634913.1| - 8.4 6.8 10.5 0.44 10.9 0.6 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF3852) Oxysterol_BP PF01237.18 gi|21228992|ref|NP_634914.1| - 0.0073 15.2 3.1 0.008 15.1 3.1 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Peptidase_S49_N PF08496.10 gi|21228992|ref|NP_634914.1| - 0.26 11.3 2.8 0.25 11.4 2.8 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal FtsX PF02687.21 gi|21228993|ref|NP_634915.1| - 5.2e-14 52.5 13.5 5.3e-14 52.5 8.1 2.2 2 0 0 2 2 2 1 FtsX-like permease family MacB_PCD PF12704.7 gi|21228993|ref|NP_634915.1| - 4.1e-12 46.9 8.7 1.5e-11 45.0 0.0 3.1 3 0 0 3 3 3 1 MacB-like periplasmic core domain DUF1744 PF08490.12 gi|21228993|ref|NP_634915.1| - 0.12 10.9 0.5 0.19 10.3 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1744) DUF4118 PF13493.6 gi|21228993|ref|NP_634915.1| - 1.7 8.5 11.0 0.28 11.0 6.5 1.8 1 1 0 2 2 2 0 Domain of unknown function (DUF4118) MacB_PCD PF12704.7 gi|21228994|ref|NP_634916.1| - 1.7e-10 41.6 0.2 2.1e-10 41.3 0.2 1.2 1 0 0 1 1 1 1 MacB-like periplasmic core domain NPCBM_assoc PF10633.9 gi|21228995|ref|NP_634917.1| - 3.1e-10 40.2 0.0 0.0004 20.6 0.0 4.1 4 1 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|21228995|ref|NP_634917.1| - 9.2e-09 35.5 5.9 0.031 14.5 0.2 4.3 1 1 2 4 4 4 3 CARDB DUF11 PF01345.18 gi|21228995|ref|NP_634917.1| - 3.8e-06 27.1 0.1 0.072 13.4 0.1 3.8 4 0 0 4 4 4 2 Domain of unknown function DUF11 DUF2393 PF09624.10 gi|21228995|ref|NP_634917.1| - 0.0086 16.1 2.0 1.3 9.1 0.0 3.5 3 2 1 4 4 4 2 Protein of unknown function (DUF2393) Y_Y_Y PF07495.13 gi|21228995|ref|NP_634917.1| - 0.022 14.7 3.4 17 5.4 0.0 4.1 3 1 1 4 4 4 0 Y_Y_Y domain Grp7_allergen PF16984.5 gi|21228995|ref|NP_634917.1| - 0.069 13.2 0.1 9.8 6.2 0.0 2.2 1 1 1 2 2 2 0 Group 7 allergen ABC_tran PF00005.27 gi|21228996|ref|NP_634918.1| - 1.9e-33 115.9 0.1 3.3e-33 115.1 0.1 1.4 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|21228996|ref|NP_634918.1| - 8.6e-06 25.3 0.9 6.9e-05 22.4 0.9 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|21228996|ref|NP_634918.1| - 4.1e-05 24.0 0.1 9.8e-05 22.8 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|21228996|ref|NP_634918.1| - 0.00017 21.3 0.1 0.00033 20.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|21228996|ref|NP_634918.1| - 0.0022 17.9 0.3 0.63 9.8 0.4 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|21228996|ref|NP_634918.1| - 0.0027 17.6 0.0 0.0075 16.2 0.1 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_10 PF12846.7 gi|21228996|ref|NP_634918.1| - 0.004 16.1 0.1 0.29 10.0 0.1 2.2 1 1 1 2 2 2 1 AAA-like domain AAA_22 PF13401.6 gi|21228996|ref|NP_634918.1| - 0.0062 16.8 0.7 0.062 13.6 0.1 2.1 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|21228996|ref|NP_634918.1| - 0.016 14.9 0.1 0.076 12.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|21228996|ref|NP_634918.1| - 0.034 14.6 0.8 0.079 13.4 0.0 1.9 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|21228996|ref|NP_634918.1| - 0.07 12.7 0.3 0.31 10.6 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|21228996|ref|NP_634918.1| - 0.098 12.3 2.1 1.6 8.3 0.1 2.7 2 1 0 2 2 2 0 AAA ATPase domain HTH_3 PF01381.22 gi|21228997|ref|NP_634919.1| - 3.8e-14 52.5 0.1 4.2e-14 52.3 0.1 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|21228997|ref|NP_634919.1| - 5.9e-09 36.1 0.0 6.6e-09 36.0 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|21228997|ref|NP_634919.1| - 1e-07 31.9 0.1 1.2e-07 31.6 0.1 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|21228997|ref|NP_634919.1| - 1.6e-05 25.3 0.0 1.8e-05 25.1 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_Crp_2 PF13545.6 gi|21228997|ref|NP_634919.1| - 0.004 17.1 0.0 0.0073 16.3 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_25 PF13413.6 gi|21228997|ref|NP_634919.1| - 0.0082 16.0 0.1 0.016 15.0 0.1 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|21228997|ref|NP_634919.1| - 0.031 14.2 0.0 0.034 14.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_CI_repr PF07022.13 gi|21228997|ref|NP_634919.1| - 0.065 13.3 0.0 0.075 13.1 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain PhaG_MnhG_YufB PF03334.14 gi|21228998|ref|NP_634920.1| - 0.15 12.3 4.4 0.27 11.5 4.4 1.4 1 1 0 1 1 1 0 Na+/H+ antiporter subunit Orai-1 PF07856.12 gi|21228998|ref|NP_634920.1| - 0.74 9.5 7.6 0.96 9.1 3.5 2.1 2 0 0 2 2 2 0 Mediator of CRAC channel activity Peptidase_A24 PF01478.18 gi|21228998|ref|NP_634920.1| - 2.5 8.6 8.8 0.19 12.1 2.4 1.9 1 1 1 2 2 2 0 Type IV leader peptidase family TraS PF10624.9 gi|21228998|ref|NP_634920.1| - 3.8 7.4 8.6 0.37 10.7 4.4 1.4 2 0 0 2 2 2 0 Plasmid conjugative transfer entry exclusion protein TraS Pirin PF02678.16 gi|21228999|ref|NP_634921.1| - 2.9e-37 126.9 0.2 4.9e-37 126.2 0.2 1.4 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 gi|21228999|ref|NP_634921.1| - 5.3e-34 116.7 0.0 8.3e-33 112.9 0.0 2.1 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Cupin_2 PF07883.11 gi|21228999|ref|NP_634921.1| - 1.3e-05 24.8 3.9 0.012 15.3 0.3 3.5 2 1 1 3 3 3 2 Cupin domain AraC_binding PF02311.19 gi|21228999|ref|NP_634921.1| - 0.023 14.6 2.1 4.3 7.3 0.2 3.0 2 1 0 2 2 2 0 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|21228999|ref|NP_634921.1| - 0.12 12.1 0.5 8 6.2 0.0 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF861) DDE_Tnp_1 PF01609.21 gi|21229000|ref|NP_634922.1| - 0.0001 22.0 1.0 0.00013 21.6 1.0 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|21229000|ref|NP_634922.1| - 0.0066 16.7 0.1 0.0089 16.3 0.1 1.2 1 0 0 1 1 1 1 Transposase DDE domain HMG_box PF00505.19 gi|21229002|ref|NP_634924.1| - 0.2 12.1 1.8 6.5 7.2 0.4 2.8 2 1 1 3 3 3 0 HMG (high mobility group) box HTH_32 PF13565.6 gi|21229003|ref|NP_634925.1| - 7.4e-16 58.5 0.1 2.4e-13 50.5 0.0 2.1 2 0 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 gi|21229003|ref|NP_634925.1| - 1.2e-12 47.7 0.1 9.7e-12 44.7 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|21229003|ref|NP_634925.1| - 7e-08 32.0 0.1 5.3e-06 26.1 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|21229003|ref|NP_634925.1| - 0.0089 16.1 0.0 0.2 11.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21229003|ref|NP_634925.1| - 0.048 13.6 0.2 0.45 10.5 0.0 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain DDE_3 PF13358.6 gi|21229004|ref|NP_634926.1| - 1.9e-28 99.0 0.0 2.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF772 PF05598.11 gi|21229005|ref|NP_634927.1| - 5.8e-14 51.9 0.0 1.1e-13 50.9 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) aGPT-Pplase3 PF18746.1 gi|21229005|ref|NP_634927.1| - 0.0045 16.4 0.6 0.0085 15.5 0.3 1.6 2 0 0 2 2 2 1 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 MCD PF05292.11 gi|21229005|ref|NP_634927.1| - 0.03 13.9 0.2 0.074 12.6 0.0 1.6 1 1 0 1 1 1 0 Malonyl-CoA decarboxylase C-terminal domain DUF445 PF04286.12 gi|21229005|ref|NP_634927.1| - 0.076 12.8 5.8 0.11 12.3 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF445) GHL6 PF14871.6 gi|21229005|ref|NP_634927.1| - 0.083 13.0 0.3 11 6.2 0.1 2.5 2 0 0 2 2 2 0 Hypothetical glycosyl hydrolase 6 Phage_holin_6_1 PF09682.10 gi|21229005|ref|NP_634927.1| - 0.23 11.9 5.9 6.3 7.3 0.9 3.4 3 0 0 3 3 3 0 Bacteriophage holin of superfamily 6 (Holin_LLH) DUF4404 PF14357.6 gi|21229005|ref|NP_634927.1| - 1.1 9.9 3.2 0.64 10.7 0.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) DDE_3 PF13358.6 gi|21229006|ref|NP_634928.1| - 1.9e-28 99.0 0.0 2.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease HTH_32 PF13565.6 gi|21229007|ref|NP_634929.1| - 7.4e-16 58.5 0.1 2.4e-13 50.5 0.0 2.1 2 0 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 gi|21229007|ref|NP_634929.1| - 1.2e-12 47.7 0.1 9.7e-12 44.7 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|21229007|ref|NP_634929.1| - 7e-08 32.0 0.1 5.3e-06 26.1 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|21229007|ref|NP_634929.1| - 0.0089 16.1 0.0 0.2 11.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21229007|ref|NP_634929.1| - 0.048 13.6 0.2 0.45 10.5 0.0 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Y1_Tnp PF01797.16 gi|21229008|ref|NP_634930.1| - 1.1e-35 122.3 1.5 1.4e-35 122.0 1.5 1.1 1 0 0 1 1 1 1 Transposase IS200 like Pirin PF02678.16 gi|21229009|ref|NP_634931.1| - 2.9e-36 123.7 0.4 5.2e-36 122.9 0.2 1.5 2 0 0 2 2 2 1 Pirin Pirin_C PF05726.13 gi|21229009|ref|NP_634931.1| - 3.3e-34 117.4 0.0 8.9e-33 112.8 0.0 2.4 2 1 0 2 2 2 1 Pirin C-terminal cupin domain Cupin_2 PF07883.11 gi|21229009|ref|NP_634931.1| - 0.0017 18.0 3.1 0.033 13.9 0.2 3.1 3 0 0 3 3 3 1 Cupin domain Cupin_3 PF05899.12 gi|21229009|ref|NP_634931.1| - 0.1 12.3 0.5 8.1 6.2 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF861) Paramyxo_NS_C PF02725.14 gi|21229010|ref|NP_634932.1| - 0.14 12.2 0.0 3.5 7.7 0.0 2.1 1 1 0 2 2 2 0 Non-structural protein C DUF2121 PF09894.9 gi|21229011|ref|NP_634933.1| - 5.9e-69 231.6 5.4 6.5e-69 231.4 5.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2121) Proteasome PF00227.26 gi|21229011|ref|NP_634933.1| - 0.0012 18.4 0.1 0.081 12.4 0.0 2.4 2 0 0 2 2 2 2 Proteasome subunit Adenine_deam_C PF13382.6 gi|21229012|ref|NP_634934.1| - 4.1e-59 198.7 0.0 7.1e-59 197.9 0.0 1.4 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 gi|21229012|ref|NP_634934.1| - 1.5e-31 110.0 0.0 3.6e-30 105.4 0.0 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|21229012|ref|NP_634934.1| - 6.6e-05 22.6 0.0 0.049 13.1 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family DUF5567 PF17722.1 gi|21229012|ref|NP_634934.1| - 0.13 12.2 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5567) Aminotran_5 PF00266.19 gi|21229013|ref|NP_634935.1| - 3.1e-06 26.4 0.0 7.4e-06 25.1 0.0 1.4 1 1 1 2 2 2 1 Aminotransferase class-V HNH_3 PF13392.6 gi|21229013|ref|NP_634935.1| - 0.09 12.6 0.0 0.25 11.1 0.0 1.7 1 0 0 1 1 1 0 HNH endonuclease Hydantoinase_B PF02538.14 gi|21229014|ref|NP_634936.1| - 1.5e-207 690.1 0.0 2.3e-207 689.5 0.0 1.3 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.18 gi|21229014|ref|NP_634936.1| - 1.4e-127 425.0 0.3 2.5e-127 424.1 0.3 1.4 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|21229014|ref|NP_634936.1| - 1.3e-62 210.6 0.0 1.1e-60 204.4 0.0 2.8 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase N-terminal region DUF1297 PF06973.12 gi|21229015|ref|NP_634937.1| - 4.9e-52 176.2 0.0 6.6e-52 175.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|21229015|ref|NP_634937.1| - 3.7e-40 136.7 0.0 7.9e-40 135.6 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) CPSase_L_D2 PF02786.17 gi|21229015|ref|NP_634937.1| - 0.038 13.5 0.0 0.063 12.8 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Big_5 PF13205.6 gi|21229016|ref|NP_634938.1| - 6.9e-06 26.7 0.0 8.7e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial Ig-like domain HDOD PF08668.12 gi|21229017|ref|NP_634939.1| - 0.0016 18.0 0.1 0.32 10.4 0.0 2.2 1 1 1 2 2 2 2 HDOD domain DUF1279 PF06916.13 gi|21229017|ref|NP_634939.1| - 0.029 14.9 3.3 1.3 9.6 0.1 3.2 4 0 0 4 4 4 0 Protein of unknown function (DUF1279) COX14 PF14880.6 gi|21229017|ref|NP_634939.1| - 0.54 10.1 4.3 0.14 12.0 0.8 1.8 2 0 0 2 2 2 0 Cytochrome oxidase c assembly Flavin_Reduct PF01613.18 gi|21229018|ref|NP_634940.1| - 6.7e-26 91.2 0.0 8.2e-26 90.9 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Aldo_ket_red PF00248.21 gi|21229019|ref|NP_634941.1| - 3e-39 135.0 0.0 1.4e-37 129.5 0.0 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|21229019|ref|NP_634941.1| - 4.2e-13 49.6 7.1 8.9e-13 48.6 7.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229019|ref|NP_634941.1| - 3.6e-09 36.7 7.7 6.7e-09 35.8 7.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|21229019|ref|NP_634941.1| - 1.1e-06 28.4 1.8 1.1e-05 25.2 0.1 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 gi|21229019|ref|NP_634941.1| - 2.2e-06 27.9 3.5 0.017 15.3 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21229019|ref|NP_634941.1| - 5.8e-05 23.1 6.4 0.035 14.2 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21229019|ref|NP_634941.1| - 0.00028 21.8 3.6 0.012 16.5 0.4 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|21229019|ref|NP_634941.1| - 0.00062 19.8 10.2 0.0043 17.1 10.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21229019|ref|NP_634941.1| - 0.00063 19.4 11.1 0.0012 18.5 3.0 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 gi|21229019|ref|NP_634941.1| - 0.0025 18.2 8.7 0.0065 16.9 8.7 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain PA_decarbox PF05870.11 gi|21229019|ref|NP_634941.1| - 0.0036 16.9 0.0 1.1 8.9 0.0 2.4 2 0 0 2 2 2 2 Phenolic acid decarboxylase (PAD) Fer4_22 PF17179.4 gi|21229019|ref|NP_634941.1| - 0.009 16.8 6.8 1.6 9.6 2.0 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21229019|ref|NP_634941.1| - 0.24 12.0 14.5 2.9 8.6 14.7 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21229019|ref|NP_634941.1| - 0.48 11.1 17.2 0.29 11.7 6.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21229019|ref|NP_634941.1| - 6 7.1 14.9 0.074 13.2 2.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21229019|ref|NP_634941.1| - 7.7 6.8 16.7 0.55 10.4 3.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Aldo_ket_red PF00248.21 gi|21229020|ref|NP_634942.1| - 3.6e-41 141.3 0.0 6.3e-40 137.2 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|21229020|ref|NP_634942.1| - 7.6e-12 45.6 7.7 1.6e-11 44.5 7.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229020|ref|NP_634942.1| - 5.5e-07 29.6 7.4 1.2e-06 28.6 7.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|21229020|ref|NP_634942.1| - 3.6e-05 23.5 0.1 3.6e-05 23.5 0.1 1.8 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_10 PF13237.6 gi|21229020|ref|NP_634942.1| - 0.00026 21.1 5.6 0.0031 17.6 0.3 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21229020|ref|NP_634942.1| - 0.00078 19.8 6.9 0.0018 18.7 6.9 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21229020|ref|NP_634942.1| - 0.00084 19.5 3.3 0.11 12.7 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21229020|ref|NP_634942.1| - 0.0013 18.9 6.3 0.45 10.7 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21229020|ref|NP_634942.1| - 0.006 17.5 5.2 0.07 14.1 0.5 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|21229020|ref|NP_634942.1| - 0.0066 16.2 10.0 0.012 15.3 1.8 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Med27 PF11571.8 gi|21229020|ref|NP_634942.1| - 0.02 15.2 2.1 0.07 13.5 0.1 2.3 2 0 0 2 2 2 0 Mediator complex subunit 27 PA_decarbox PF05870.11 gi|21229020|ref|NP_634942.1| - 0.12 12.0 0.2 0.33 10.6 0.1 1.8 2 0 0 2 2 2 0 Phenolic acid decarboxylase (PAD) Fer4_7 PF12838.7 gi|21229020|ref|NP_634942.1| - 0.56 10.8 12.9 4.3 8.0 12.8 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21229020|ref|NP_634942.1| - 1.5 9.6 12.6 0.46 11.1 3.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21229020|ref|NP_634942.1| - 2 8.7 13.5 0.59 10.3 2.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain CMD PF02627.20 gi|21229021|ref|NP_634943.1| - 1.6e-11 44.0 0.0 1.9e-11 43.8 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SinI PF08671.10 gi|21229021|ref|NP_634943.1| - 0.13 12.1 0.1 0.23 11.3 0.1 1.4 1 0 0 1 1 1 0 Anti-repressor SinI Acetyltransf_3 PF13302.7 gi|21229022|ref|NP_634944.1| - 3.1e-15 57.1 0.0 3.7e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21229022|ref|NP_634944.1| - 4.9e-09 36.4 0.0 5.6e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21229022|ref|NP_634944.1| - 0.007 16.8 0.0 0.0088 16.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21229022|ref|NP_634944.1| - 0.032 14.2 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_8 PF13523.6 gi|21229022|ref|NP_634944.1| - 0.05 13.3 0.0 0.055 13.1 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain CDP-OH_P_transf PF01066.21 gi|21229024|ref|NP_634946.1| - 0.15 12.9 0.3 0.43 11.4 0.3 1.9 1 1 0 1 1 1 0 CDP-alcohol phosphatidyltransferase Cytochrom_D1 PF02239.16 gi|21229025|ref|NP_634947.1| - 4.6e-12 45.1 8.3 0.00062 18.4 1.1 4.4 2 1 2 4 4 4 4 Cytochrome D1 heme domain Lactonase PF10282.9 gi|21229025|ref|NP_634947.1| - 5.9e-12 45.5 6.6 0.034 13.4 0.1 4.0 1 1 1 3 3 3 1 Lactonase, 7-bladed beta-propeller PD40 PF07676.12 gi|21229025|ref|NP_634947.1| - 1e-09 38.1 12.2 1.7 8.7 0.1 10.1 10 0 0 10 10 10 2 WD40-like Beta Propeller Repeat NHL PF01436.21 gi|21229025|ref|NP_634947.1| - 1.2e-07 31.4 12.8 2.3 8.4 0.0 7.3 7 0 0 7 7 7 4 NHL repeat SBP56 PF05694.11 gi|21229025|ref|NP_634947.1| - 2.1e-06 26.9 0.2 1.4 7.6 0.0 4.9 1 1 3 4 4 4 3 56kDa selenium binding protein (SBP56) Arylesterase PF01731.20 gi|21229025|ref|NP_634947.1| - 0.00027 21.1 9.1 28 5.0 0.0 6.0 5 1 1 6 6 6 1 Arylesterase Virul_fac_BrkB PF03631.15 gi|21229026|ref|NP_634948.1| - 9e-51 173.0 19.6 1.1e-50 172.7 19.6 1.0 1 0 0 1 1 1 1 Virulence factor BrkB TssN PF17555.2 gi|21229026|ref|NP_634948.1| - 2 7.7 19.7 2.5 7.4 10.4 2.1 2 0 0 2 2 2 0 Type VI secretion system, TssN Polysacc_synt PF01943.17 gi|21229029|ref|NP_634951.1| - 1.5e-25 90.1 38.2 6.8e-25 88.0 21.5 2.4 3 0 0 3 3 3 2 Polysaccharide biosynthesis protein MatE PF01554.18 gi|21229029|ref|NP_634951.1| - 9.6e-20 70.9 34.5 6.5e-14 51.9 13.0 3.1 3 0 0 3 3 3 2 MatE Polysacc_synt_3 PF13440.6 gi|21229029|ref|NP_634951.1| - 8.6e-17 61.3 13.2 8.6e-17 61.3 13.2 2.1 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|21229029|ref|NP_634951.1| - 1.8e-16 60.5 12.3 1.8e-16 60.5 12.3 3.7 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|21229029|ref|NP_634951.1| - 5.8e-05 21.9 30.8 0.00011 20.9 30.8 1.5 1 0 0 1 1 1 1 Lipid II flippase MurJ E1-E2_ATPase PF00122.20 gi|21229029|ref|NP_634951.1| - 2.4 7.7 10.9 0.052 13.1 0.5 2.9 3 0 0 3 3 3 0 E1-E2 ATPase zf-ribbon_3 PF13248.6 gi|21229030|ref|NP_634952.1| - 1.2e-10 40.4 28.3 1.4e-06 27.5 3.8 4.7 2 2 1 4 4 4 3 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|21229030|ref|NP_634952.1| - 3.4e-10 39.3 26.2 4.1e-07 29.5 5.8 4.7 5 0 0 5 5 5 3 zinc-ribbon domain DZR PF12773.7 gi|21229030|ref|NP_634952.1| - 8.9e-10 38.4 12.4 8.9e-10 38.4 12.4 3.1 1 1 2 3 3 3 1 Double zinc ribbon UPF0547 PF10571.9 gi|21229030|ref|NP_634952.1| - 6.9e-05 22.8 1.7 6.9e-05 22.8 1.7 4.2 4 0 0 4 4 4 1 Uncharacterised protein family UPF0547 zinc_ribbon_15 PF17032.5 gi|21229030|ref|NP_634952.1| - 0.008 16.9 21.7 0.013 16.2 1.1 3.4 2 1 0 2 2 2 1 zinc-ribbon family zf-NADH-PPase PF09297.11 gi|21229030|ref|NP_634952.1| - 0.022 14.4 22.2 0.15 11.7 0.3 5.2 4 1 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|21229030|ref|NP_634952.1| - 0.26 11.3 20.0 1e+03 -0.3 20.0 3.3 1 1 0 1 1 1 0 zinc-ribbons PolC_DP2 PF03833.13 gi|21229030|ref|NP_634952.1| - 0.42 8.4 12.0 0.015 13.2 5.7 1.6 1 1 1 2 2 2 0 DNA polymerase II large subunit DP2 PHF5 PF03660.14 gi|21229030|ref|NP_634952.1| - 0.45 10.7 12.9 0.13 12.5 4.5 2.1 1 1 1 2 2 2 0 PHF5-like protein Ribosomal_L32p PF01783.23 gi|21229030|ref|NP_634952.1| - 0.5 10.7 15.8 0.17 12.2 1.5 3.4 2 1 1 3 3 3 0 Ribosomal L32p protein family Nudix_N_2 PF14803.6 gi|21229030|ref|NP_634952.1| - 0.66 9.9 0.2 0.66 9.9 0.2 5.5 6 0 0 6 6 5 0 Nudix N-terminal DUF1258 PF06869.12 gi|21229030|ref|NP_634952.1| - 1.5 8.2 5.3 0.91 8.9 3.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1258) zf-CHY PF05495.12 gi|21229030|ref|NP_634952.1| - 1.8 9.1 17.8 20 5.8 13.7 2.9 1 1 1 2 2 2 0 CHY zinc finger NRDD PF13597.6 gi|21229030|ref|NP_634952.1| - 2.5 6.8 16.2 0.075 11.8 7.4 2.5 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase Tmemb_55A PF09788.9 gi|21229030|ref|NP_634952.1| - 3.7 6.6 10.0 33 3.4 10.0 2.2 1 1 0 1 1 1 0 Transmembrane protein 55A zf_UBZ PF18439.1 gi|21229030|ref|NP_634952.1| - 4 7.1 23.0 4.7 6.9 0.4 5.5 4 1 2 6 6 6 0 Ubiquitin-Binding Zinc Finger Zn_Tnp_IS91 PF14319.6 gi|21229030|ref|NP_634952.1| - 5.6 7.1 20.1 0.25 11.4 1.2 3.4 2 1 0 2 2 2 0 Transposase zinc-binding domain Prok-RING_4 PF14447.6 gi|21229030|ref|NP_634952.1| - 6.8 6.6 17.1 0.51 10.3 1.1 3.3 2 2 1 3 3 3 0 Prokaryotic RING finger family 4 DUF2116 PF09889.9 gi|21229030|ref|NP_634952.1| - 9.4 6.3 7.9 4.2 7.4 0.8 2.9 1 1 1 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DZR PF12773.7 gi|21229031|ref|NP_634953.1| - 9.1e-12 44.8 27.1 6.5e-07 29.3 8.3 3.4 1 1 2 3 3 3 3 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|21229031|ref|NP_634953.1| - 6.9e-09 34.8 39.4 0.0013 18.0 3.6 5.6 5 1 1 6 6 6 5 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|21229031|ref|NP_634953.1| - 1.4e-08 34.2 43.5 0.0002 20.9 2.3 5.5 5 1 0 5 5 5 4 zinc-ribbon domain zf-C2HC5 PF06221.13 gi|21229031|ref|NP_634953.1| - 0.0054 16.7 26.8 0.84 9.7 10.7 4.0 1 1 2 3 3 3 2 Putative zinc finger motif, C2HC5-type zinc_ribbon_15 PF17032.5 gi|21229031|ref|NP_634953.1| - 0.034 14.9 2.6 0.034 14.9 2.6 4.2 3 1 0 3 3 3 0 zinc-ribbon family DUF1258 PF06869.12 gi|21229031|ref|NP_634953.1| - 0.048 13.1 1.6 0.048 13.1 1.6 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF1258) zf-P11 PF03854.14 gi|21229031|ref|NP_634953.1| - 0.061 13.0 0.5 0.061 13.0 0.5 4.3 2 1 2 4 4 4 0 P-11 zinc finger zf-C3HC4_3 PF13920.6 gi|21229031|ref|NP_634953.1| - 0.24 11.3 30.4 0.19 11.6 1.1 4.4 1 1 3 4 4 4 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 gi|21229031|ref|NP_634953.1| - 2.9 7.8 19.6 0.91 9.4 5.8 3.4 3 1 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) zf_C2H2_13 PF18508.1 gi|21229031|ref|NP_634953.1| - 5.7 6.6 24.4 1.3 8.7 0.8 4.8 4 1 1 5 5 5 0 Zinc finger domain DUF1015 PF06245.11 gi|21229032|ref|NP_634954.1| - 3.2e-74 250.2 0.0 3.9e-74 249.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1015) Rhodanese PF00581.20 gi|21229033|ref|NP_634955.1| - 1e-26 93.5 0.1 6.8e-18 65.1 0.1 2.6 2 0 0 2 2 2 2 Rhodanese-like domain Lactamase_B PF00753.27 gi|21229033|ref|NP_634955.1| - 2.8e-10 40.5 0.1 1.5e-08 34.9 0.1 3.0 3 1 0 3 3 3 1 Metallo-beta-lactamase superfamily DUF4157 PF13699.6 gi|21229034|ref|NP_634956.1| - 0.048 13.9 0.0 0.079 13.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) DUF45 PF01863.17 gi|21229034|ref|NP_634956.1| - 0.1 12.7 0.4 0.15 12.1 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function DUF45 DNA_gyraseB_C PF00986.21 gi|21229034|ref|NP_634956.1| - 0.12 12.6 0.1 0.22 11.8 0.1 1.4 1 0 0 1 1 1 0 DNA gyrase B subunit, carboxyl terminus DUF916 PF06030.12 gi|21229035|ref|NP_634957.1| - 3e-14 53.1 1.1 0.15 12.1 0.0 5.6 4 1 1 5 5 5 5 Bacterial protein of unknown function (DUF916) NPCBM_assoc PF10633.9 gi|21229035|ref|NP_634957.1| - 1.3e-13 51.0 0.7 8.9e-05 22.7 0.1 5.0 4 2 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase fn3_5 PF06280.12 gi|21229035|ref|NP_634957.1| - 8.1e-12 45.9 7.5 5.6e-05 23.8 0.9 4.7 3 2 0 3 3 3 2 Fn3-like domain FixG_C PF11614.8 gi|21229035|ref|NP_634957.1| - 1.6e-07 31.6 0.3 0.33 11.2 0.0 3.6 3 1 0 3 3 3 3 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF11 PF01345.18 gi|21229035|ref|NP_634957.1| - 3.4e-07 30.5 0.1 0.26 11.6 0.0 4.3 3 2 0 3 3 3 2 Domain of unknown function DUF11 fn3_6 PF17766.1 gi|21229035|ref|NP_634957.1| - 3.3e-06 27.2 0.7 2.4 8.4 0.0 4.7 3 2 1 4 4 4 2 Fibronectin type-III domain DUF4625 PF15418.6 gi|21229035|ref|NP_634957.1| - 1.3e-05 25.5 2.5 0.026 14.8 0.1 3.3 3 0 0 3 3 3 2 Domain of unknown function (DUF4625) Big_2 PF02368.18 gi|21229035|ref|NP_634957.1| - 0.00013 21.7 0.1 0.28 11.1 0.0 3.1 3 0 0 3 3 2 2 Bacterial Ig-like domain (group 2) Mfa_like_1 PF13149.6 gi|21229035|ref|NP_634957.1| - 0.0013 18.9 5.4 0.022 14.8 0.7 3.4 2 1 1 3 3 3 1 Fimbrillin-like TRAP_alpha PF03896.16 gi|21229035|ref|NP_634957.1| - 0.0059 15.8 0.4 0.1 11.8 0.0 2.2 2 0 0 2 2 2 1 Translocon-associated protein (TRAP), alpha subunit DUF799 PF05643.11 gi|21229035|ref|NP_634957.1| - 0.025 14.2 0.4 2.9 7.5 0.0 2.3 2 0 0 2 2 2 0 Putative bacterial lipoprotein (DUF799) MAP PF03642.13 gi|21229035|ref|NP_634957.1| - 0.03 14.6 0.5 7.1 7.0 0.0 3.4 3 0 0 3 3 3 0 MAP domain CBM_4_9 PF02018.17 gi|21229035|ref|NP_634957.1| - 0.047 14.0 0.8 6.6 7.0 0.0 3.5 3 1 0 3 3 3 0 Carbohydrate binding domain BACON PF13004.7 gi|21229035|ref|NP_634957.1| - 0.05 13.6 7.4 1.2 9.2 0.1 3.7 5 0 0 5 5 4 0 Putative binding domain, N-terminal DUF4832 PF16116.5 gi|21229035|ref|NP_634957.1| - 0.11 12.4 0.0 38 4.0 0.0 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF4832) CARDB PF07705.11 gi|21229035|ref|NP_634957.1| - 1.7 8.9 7.6 14 6.0 0.1 4.0 3 3 0 3 3 3 0 CARDB HTH_38 PF13936.6 gi|21229036|ref|NP_634958.1| - 5.6e-05 22.8 2.7 6e-05 22.7 1.3 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain IBR PF01485.21 gi|21229036|ref|NP_634958.1| - 0.019 15.2 0.5 0.055 13.7 0.5 1.8 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain zf-BED PF02892.15 gi|21229036|ref|NP_634958.1| - 0.028 14.5 0.4 0.062 13.3 0.4 1.6 1 0 0 1 1 1 0 BED zinc finger Zn_Tnp_IS1 PF03811.13 gi|21229036|ref|NP_634958.1| - 0.028 14.2 7.5 0.073 12.8 7.5 1.8 1 1 0 1 1 1 0 InsA N-terminal domain Thioredoxin_4 PF13462.6 gi|21229036|ref|NP_634958.1| - 0.035 14.3 0.1 0.048 13.8 0.1 1.3 1 1 0 1 1 1 0 Thioredoxin PyrI_C PF02748.15 gi|21229036|ref|NP_634958.1| - 8.4 6.4 9.9 87 3.1 9.9 2.3 1 1 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain UPF0047 PF01894.17 gi|21229037|ref|NP_634959.1| - 1.4e-29 102.6 0.0 1.6e-29 102.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 Y1_Tnp PF01797.16 gi|21229038|ref|NP_634960.1| - 3.1e-25 88.6 0.4 3.6e-25 88.4 0.4 1.0 1 0 0 1 1 1 1 Transposase IS200 like PKD PF00801.20 gi|21229039|ref|NP_634961.1| - 1.2e-42 143.6 21.6 1.9e-12 46.8 1.8 4.5 4 0 0 4 4 4 4 PKD domain Polysacc_deac_1 PF01522.21 gi|21229039|ref|NP_634961.1| - 3.4e-09 36.7 0.1 9e-09 35.3 0.1 1.7 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|21229039|ref|NP_634961.1| - 1.5e-05 24.8 0.1 2.7e-05 23.9 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) PKD_3 PF16820.5 gi|21229039|ref|NP_634961.1| - 1.5e-05 24.6 2.7 5 7.0 0.0 4.7 4 0 0 4 4 4 2 PKD-like domain PGF-CTERM PF18204.1 gi|21229039|ref|NP_634961.1| - 3e-05 23.8 0.1 6.3e-05 22.8 0.0 1.6 2 0 0 2 2 2 1 PGF-CTERM motif Y_Y_Y PF07495.13 gi|21229039|ref|NP_634961.1| - 0.0025 17.7 7.0 0.51 10.3 0.4 4.0 4 0 0 4 4 4 2 Y_Y_Y domain MG2 PF01835.19 gi|21229039|ref|NP_634961.1| - 0.043 14.3 0.9 1.6 9.3 0.1 3.5 3 1 1 4 4 4 0 MG2 domain Disaggr_assoc PF08480.10 gi|21229040|ref|NP_634962.1| - 6.9e-76 254.3 11.7 6.9e-76 254.3 11.7 2.1 2 1 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.6 gi|21229040|ref|NP_634962.1| - 8.6e-09 35.4 50.5 4.7e-06 26.5 21.0 3.7 2 1 1 3 3 3 2 Right handed beta helix region PGF-CTERM PF18204.1 gi|21229040|ref|NP_634962.1| - 2.4e-05 24.1 0.0 2.4e-05 24.1 0.0 1.8 2 0 0 2 2 2 1 PGF-CTERM motif Hexapep PF00132.24 gi|21229041|ref|NP_634963.1| - 1.2e-05 24.8 16.0 0.00028 20.5 3.4 2.5 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21229041|ref|NP_634963.1| - 5.7e-05 22.8 12.0 0.031 14.0 1.1 2.5 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase VAPB_antitox PF02697.14 gi|21229042|ref|NP_634964.1| - 7.6e-05 23.4 0.9 0.00032 21.4 0.1 2.2 2 1 1 3 3 3 1 Putative antitoxin Lactamase_B_2 PF12706.7 gi|21229043|ref|NP_634965.1| - 1.1e-21 77.3 0.1 1.4e-21 77.0 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|21229043|ref|NP_634965.1| - 4.9e-09 36.5 1.8 2e-08 34.5 1.5 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|21229043|ref|NP_634965.1| - 0.11 12.3 0.0 0.19 11.6 0.0 1.5 1 1 0 1 1 1 0 Beta-lactamase superfamily domain PDEase_II PF02112.15 gi|21229043|ref|NP_634965.1| - 0.15 11.1 0.1 0.36 9.9 0.0 1.6 2 0 0 2 2 2 0 cAMP phosphodiesterases class-II Lactamase_B_6 PF16661.5 gi|21229043|ref|NP_634965.1| - 0.17 11.3 0.0 0.4 10.1 0.0 1.6 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily domain MannoseP_isomer PF01050.18 gi|21229045|ref|NP_634967.1| - 6.7e-33 113.7 0.9 6.7e-33 113.7 0.9 1.7 2 0 0 2 2 2 1 Mannose-6-phosphate isomerase Glycos_transf_1 PF00534.20 gi|21229045|ref|NP_634967.1| - 5.8e-23 81.3 0.0 1e-22 80.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21229045|ref|NP_634967.1| - 1.5e-14 54.5 0.0 3.2e-14 53.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21229045|ref|NP_634967.1| - 3.7e-10 40.1 0.3 8.9e-10 38.8 0.3 1.7 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Cupin_2 PF07883.11 gi|21229045|ref|NP_634967.1| - 2.7e-09 36.6 0.1 5.5e-09 35.6 0.1 1.6 1 0 0 1 1 1 1 Cupin domain Glyco_trans_1_2 PF13524.6 gi|21229045|ref|NP_634967.1| - 5.5e-05 23.5 0.0 0.00014 22.1 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|21229045|ref|NP_634967.1| - 0.029 14.8 0.1 0.12 12.8 0.1 1.9 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain Glyco_hydro_130 PF04041.13 gi|21229046|ref|NP_634968.1| - 4.5e-57 193.4 0.0 5.6e-57 193.1 0.0 1.0 1 0 0 1 1 1 1 beta-1,4-mannooligosaccharide phosphorylase Glyco_hydro_32N PF00251.20 gi|21229046|ref|NP_634968.1| - 0.16 11.5 0.0 0.66 9.5 0.0 1.7 1 1 1 2 2 2 0 Glycosyl hydrolases family 32 N-terminal domain Glycos_transf_1 PF00534.20 gi|21229047|ref|NP_634969.1| - 5.9e-15 55.2 0.0 1.2e-14 54.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21229047|ref|NP_634969.1| - 1.1e-12 48.5 0.0 2.5e-12 47.4 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21229047|ref|NP_634969.1| - 1.8e-09 37.9 0.0 3.8e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_hydro_88 PF07470.13 gi|21229047|ref|NP_634969.1| - 0.00061 19.0 0.2 0.25 10.4 0.1 2.7 2 1 0 2 2 2 2 Glycosyl Hydrolase Family 88 Glyco_hydro_76 PF03663.14 gi|21229047|ref|NP_634969.1| - 0.0098 15.4 0.1 0.017 14.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyl hydrolase family 76 Glyco_hydro_127 PF07944.12 gi|21229047|ref|NP_634969.1| - 0.011 14.3 1.0 0.9 8.0 0.2 2.5 2 1 0 2 2 2 0 Beta-L-arabinofuranosidase, GH127 Glyco_trans_1_2 PF13524.6 gi|21229047|ref|NP_634969.1| - 0.017 15.5 0.0 0.051 14.0 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferases group 1 C5-epim_C PF06662.13 gi|21229047|ref|NP_634969.1| - 0.031 13.8 0.6 4.4 6.8 0.1 2.5 2 0 0 2 2 2 0 D-glucuronyl C5-epimerase C-terminus Mic1 PF07035.12 gi|21229047|ref|NP_634969.1| - 0.12 12.1 0.0 0.4 10.4 0.0 1.8 1 0 0 1 1 1 0 Colon cancer-associated protein Mic1-like Urease_gamma PF00547.18 gi|21229047|ref|NP_634969.1| - 0.14 12.4 0.0 0.36 11.2 0.0 1.6 1 0 0 1 1 1 0 Urease, gamma subunit Disaggr_repeat PF06848.11 gi|21229048|ref|NP_634970.1| - 3.4e-90 300.5 3.3 6.4e-90 299.6 3.3 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|21229048|ref|NP_634970.1| - 2.3e-77 259.2 13.2 2.3e-77 259.2 13.2 3.5 3 1 1 4 4 4 1 Disaggregatase related Beta_helix PF13229.6 gi|21229048|ref|NP_634970.1| - 3.8e-14 52.8 47.9 1.1e-11 44.9 24.8 3.6 1 1 2 3 3 3 2 Right handed beta helix region DUF5123 PF17161.4 gi|21229048|ref|NP_634970.1| - 0.00013 23.0 1.8 0.00013 23.0 1.8 3.9 3 1 1 4 4 4 1 Domain of unknown function (DUF5123) Rapsyn_N PF10579.9 gi|21229048|ref|NP_634970.1| - 0.043 13.9 0.0 0.9 9.7 0.0 2.5 2 0 0 2 2 2 0 Rapsyn N-terminal myristoylation and linker region Coat_X PF07552.11 gi|21229048|ref|NP_634970.1| - 0.15 11.9 1.1 1.6 8.6 0.1 2.3 2 0 0 2 2 2 0 Spore Coat Protein X and V domain DUF1699 PF08004.11 gi|21229050|ref|NP_634972.1| - 2.1e-61 205.3 0.5 2.4e-61 205.2 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) PAM2 PF07145.15 gi|21229050|ref|NP_634972.1| - 0.093 12.5 0.3 12 5.8 0.1 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region DUF4394 PF14339.6 gi|21229050|ref|NP_634972.1| - 0.11 11.8 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) TrmB PF01978.19 gi|21229051|ref|NP_634973.1| - 0.047 13.6 0.0 0.3 11.0 0.0 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF2551 PF10826.8 gi|21229052|ref|NP_634974.1| - 2e-34 117.6 0.8 2.5e-34 117.3 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) Penicillinase_R PF03965.16 gi|21229052|ref|NP_634974.1| - 0.00029 21.2 0.0 0.0004 20.7 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor DUF35_N PF12172.8 gi|21229053|ref|NP_634975.1| - 0.014 15.2 0.3 0.046 13.6 0.0 1.8 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) RNHCP PF12647.7 gi|21229053|ref|NP_634975.1| - 0.029 14.3 0.1 0.044 13.7 0.1 1.2 1 0 0 1 1 1 0 RNHCP domain DUF4867 PF16161.5 gi|21229053|ref|NP_634975.1| - 0.097 12.1 0.1 0.14 11.6 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4867) zf-ACC PF17848.1 gi|21229053|ref|NP_634975.1| - 0.46 10.6 2.0 3.4 7.8 0.1 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain PPK2 PF03976.14 gi|21229054|ref|NP_634976.1| - 2.7e-135 449.1 5.3 5.6e-85 284.5 2.1 2.1 2 0 0 2 2 2 2 Polyphosphate kinase 2 (PPK2) Vps8 PF12816.7 gi|21229054|ref|NP_634976.1| - 0.11 12.0 0.0 0.32 10.5 0.0 1.7 2 0 0 2 2 2 0 Golgi CORVET complex core vacuolar protein 8 AAA_18 PF13238.6 gi|21229054|ref|NP_634976.1| - 0.12 12.9 2.3 3.1 8.4 0.2 3.1 3 0 0 3 3 3 0 AAA domain SPECT1 PF18680.1 gi|21229054|ref|NP_634976.1| - 6.5 6.4 9.0 0.22 11.2 1.2 2.2 2 1 1 3 3 3 0 Plasmodium host cell traversal SPECT1 Response_reg PF00072.24 gi|21229055|ref|NP_634977.1| - 1.7e-25 89.3 0.0 2.2e-25 89.0 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Acyl_transf_1 PF00698.21 gi|21229055|ref|NP_634977.1| - 0.016 14.7 0.0 0.019 14.5 0.0 1.1 1 0 0 1 1 1 0 Acyl transferase domain Response_reg PF00072.24 gi|21229056|ref|NP_634978.1| - 1.4e-26 92.9 0.1 1.8e-26 92.5 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain HisKA_2 PF07568.12 gi|21229057|ref|NP_634979.1| - 1.1e-29 102.4 3.3 4.1e-29 100.5 1.4 2.8 2 0 0 2 2 2 1 Histidine kinase dCache_1 PF02743.18 gi|21229057|ref|NP_634979.1| - 3.6e-26 92.5 0.1 1e-25 91.0 0.1 1.8 1 0 0 1 1 1 1 Cache domain PAS_3 PF08447.12 gi|21229057|ref|NP_634979.1| - 3.1e-18 65.8 0.3 1.2e-17 64.0 0.1 2.1 2 0 0 2 2 2 1 PAS fold HAMP PF00672.25 gi|21229057|ref|NP_634979.1| - 2.1e-10 40.8 0.1 2.4e-06 27.8 0.0 2.9 3 0 0 3 3 2 2 HAMP domain HATPase_c PF02518.26 gi|21229057|ref|NP_634979.1| - 2.4e-08 34.4 0.0 1.6e-07 31.8 0.0 2.4 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cache_3-Cache_2 PF17201.4 gi|21229057|ref|NP_634979.1| - 8.5e-06 25.2 0.1 3.2e-05 23.3 0.0 2.1 2 0 0 2 2 2 1 Cache 3/Cache 2 fusion domain PAS PF00989.25 gi|21229057|ref|NP_634979.1| - 0.00078 19.4 0.1 0.0023 17.9 0.1 1.9 1 0 0 1 1 1 1 PAS fold HWE_HK PF07536.14 gi|21229057|ref|NP_634979.1| - 0.0035 18.0 0.0 0.01 16.5 0.0 1.8 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|21229057|ref|NP_634979.1| - 0.0084 16.1 0.0 0.028 14.4 0.0 1.8 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain sCache_2 PF17200.4 gi|21229057|ref|NP_634979.1| - 0.01 15.7 0.0 0.042 13.7 0.0 2.0 2 0 0 2 2 2 0 Single Cache domain 2 dCache_2 PF08269.11 gi|21229057|ref|NP_634979.1| - 0.062 12.5 0.9 0.19 10.8 0.0 2.3 2 0 0 2 2 2 0 Cache domain TMP_2 PF06791.13 gi|21229057|ref|NP_634979.1| - 0.21 11.2 1.2 12 5.5 0.3 2.3 2 0 0 2 2 2 0 Prophage tail length tape measure protein Hydantoinase_B PF02538.14 gi|21229057|ref|NP_634979.1| - 0.25 9.7 1.8 1.9 6.8 0.2 2.2 2 0 0 2 2 2 0 Hydantoinase B/oxoprolinase DUF1724 PF08350.10 gi|21229058|ref|NP_634980.1| - 7.5e-25 86.8 0.1 1.4e-24 86.0 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21229058|ref|NP_634980.1| - 0.0012 18.6 0.3 0.0012 18.6 0.3 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|21229058|ref|NP_634980.1| - 0.11 12.5 0.4 0.25 11.4 0.3 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix Transposase_mut PF00872.18 gi|21229059|ref|NP_634981.1| - 1.4e-113 379.6 2.7 1.7e-113 379.3 2.7 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|21229059|ref|NP_634981.1| - 7.7e-10 39.1 0.0 2.1e-09 37.7 0.0 1.8 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_ISL3 PF01610.17 gi|21229059|ref|NP_634981.1| - 0.0019 18.0 1.4 0.041 13.6 0.1 2.4 2 1 1 3 3 3 1 Transposase DDE_Tnp_IS240 PF13610.6 gi|21229059|ref|NP_634981.1| - 0.0042 17.3 3.6 0.083 13.1 3.0 2.6 1 1 1 2 2 2 1 DDE domain Dynein_light PF01221.18 gi|21229059|ref|NP_634981.1| - 0.11 12.8 1.1 0.37 11.1 0.7 2.1 2 0 0 2 2 2 0 Dynein light chain type 1 DUF1724 PF08350.10 gi|21229060|ref|NP_634982.1| - 1.9e-18 66.3 0.0 3.4e-18 65.5 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) TFIID_NTD2 PF04494.15 gi|21229060|ref|NP_634982.1| - 0.0093 16.2 0.2 0.0093 16.2 0.2 1.9 2 1 0 2 2 2 1 WD40 associated region in TFIID subunit, NTD2 domain HTH_5 PF01022.20 gi|21229060|ref|NP_634982.1| - 0.097 12.6 0.4 0.17 11.8 0.4 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family PAS_3 PF08447.12 gi|21229061|ref|NP_634983.1| - 3.9e-39 132.8 0.6 1.6e-19 70.0 0.0 2.2 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 gi|21229061|ref|NP_634983.1| - 4.6e-10 39.5 1.1 0.00055 19.9 0.1 2.6 2 2 0 2 2 2 2 PAS fold PAS_9 PF13426.7 gi|21229061|ref|NP_634983.1| - 6.1e-10 39.3 0.7 0.00081 19.6 0.1 2.4 2 0 0 2 2 2 2 PAS domain PAS_11 PF14598.6 gi|21229061|ref|NP_634983.1| - 1.5e-05 25.1 0.0 0.21 11.7 0.0 2.4 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|21229061|ref|NP_634983.1| - 1.7e-05 25.0 0.0 0.089 13.1 0.0 2.5 2 1 0 2 2 2 2 PAS fold zf-ZPR1 PF03367.13 gi|21229061|ref|NP_634983.1| - 0.019 14.8 0.5 4.2 7.2 0.2 2.2 2 0 0 2 2 2 0 ZPR1 zinc-finger domain DUF3116 PF11313.8 gi|21229061|ref|NP_634983.1| - 0.088 12.7 0.2 13 5.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3116) EF-hand_13 PF17958.1 gi|21229061|ref|NP_634983.1| - 0.097 12.5 0.0 0.29 10.9 0.0 1.8 1 0 0 1 1 1 0 EF-hand domain SCAB-Ig PF16709.5 gi|21229061|ref|NP_634983.1| - 0.12 12.4 0.0 3 8.0 0.0 2.4 2 0 0 2 2 2 0 Ig domain of plant-specific actin-binding protein DUF2769 PF10967.8 gi|21229062|ref|NP_634984.1| - 6.1e-09 36.4 4.5 1e-08 35.7 4.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) B12-binding PF02310.19 gi|21229063|ref|NP_634985.1| - 4e-26 91.4 0.4 6.8e-26 90.7 0.4 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|21229063|ref|NP_634985.1| - 5e-19 68.5 1.1 1.2e-18 67.3 1.1 1.7 1 0 0 1 1 1 1 B12 binding domain Dimeth_Pyl PF09505.10 gi|21229064|ref|NP_634986.1| - 2.5e-198 659.3 2.9 2.8e-198 659.2 2.9 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) XFP_C PF09363.10 gi|21229064|ref|NP_634986.1| - 0.22 11.0 0.1 0.34 10.4 0.1 1.2 1 0 0 1 1 1 0 XFP C-terminal domain Dimeth_Pyl PF09505.10 gi|21229065|ref|NP_634987.1| - 1.1e-54 185.7 2.5 1.2e-54 185.6 2.5 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) FERM_f0 PF16511.5 gi|21229065|ref|NP_634987.1| - 0.012 15.9 0.1 0.025 14.9 0.0 1.5 2 0 0 2 2 2 0 N-terminal or F0 domain of Talin-head FERM AA_permease_2 PF13520.6 gi|21229066|ref|NP_634988.1| - 1.1e-65 222.2 47.5 1.3e-65 221.9 47.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|21229066|ref|NP_634988.1| - 2.7e-11 42.8 39.2 5.2e-11 41.8 39.3 1.4 1 1 0 1 1 1 1 Amino acid permease Phage_holin_3_6 PF07332.11 gi|21229066|ref|NP_634988.1| - 0.069 13.2 0.2 0.069 13.2 0.2 5.6 3 1 1 4 4 4 0 Putative Actinobacterial Holin-X, holin superfamily III HisKA_2 PF07568.12 gi|21229067|ref|NP_634989.1| - 5e-30 103.4 1.1 5e-30 103.4 1.1 2.2 2 0 0 2 2 2 1 Histidine kinase dCache_1 PF02743.18 gi|21229067|ref|NP_634989.1| - 2.3e-27 96.4 0.1 5.9e-27 95.0 0.1 1.7 1 0 0 1 1 1 1 Cache domain PAS_3 PF08447.12 gi|21229067|ref|NP_634989.1| - 3.1e-18 65.9 0.1 8.5e-18 64.4 0.1 1.8 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|21229067|ref|NP_634989.1| - 1.8e-09 38.1 0.1 7.5e-09 36.1 0.1 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|21229067|ref|NP_634989.1| - 4.3e-09 36.6 0.2 2.5e-05 24.5 0.1 3.1 3 0 0 3 3 3 2 HAMP domain HATPase_c_2 PF13581.6 gi|21229067|ref|NP_634989.1| - 7.4e-06 25.9 0.0 1.9e-05 24.6 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Cache_3-Cache_2 PF17201.4 gi|21229067|ref|NP_634989.1| - 1.4e-05 24.5 1.7 0.00014 21.2 0.0 2.7 3 0 0 3 3 3 1 Cache 3/Cache 2 fusion domain HWE_HK PF07536.14 gi|21229067|ref|NP_634989.1| - 0.0011 19.6 0.0 0.0036 18.0 0.0 1.9 1 0 0 1 1 1 1 HWE histidine kinase SAS-6_N PF16531.5 gi|21229067|ref|NP_634989.1| - 0.0032 18.0 0.1 1.1 9.9 0.0 2.8 2 0 0 2 2 2 1 Centriolar protein SAS N-terminal PAS PF00989.25 gi|21229067|ref|NP_634989.1| - 0.028 14.4 0.1 0.12 12.4 0.0 2.2 2 0 0 2 2 2 0 PAS fold sCache_2 PF17200.4 gi|21229067|ref|NP_634989.1| - 0.033 14.0 0.0 0.1 12.5 0.0 1.8 1 0 0 1 1 1 0 Single Cache domain 2 dCache_2 PF08269.11 gi|21229067|ref|NP_634989.1| - 0.09 11.9 0.0 0.09 11.9 0.0 2.2 3 0 0 3 3 3 0 Cache domain LSM PF01423.22 gi|21229067|ref|NP_634989.1| - 0.12 12.1 0.1 0.35 10.6 0.1 1.8 1 0 0 1 1 1 0 LSM domain CREPT PF16566.5 gi|21229067|ref|NP_634989.1| - 0.42 10.8 0.0 0.42 10.8 0.0 3.1 4 0 0 4 4 4 0 Cell-cycle alteration and expression-elevated protein in tumour Lactamase_B PF00753.27 gi|21229068|ref|NP_634990.1| - 0.00073 19.6 0.1 0.0016 18.5 0.1 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|21229068|ref|NP_634990.1| - 0.081 12.4 0.0 0.14 11.7 0.0 1.6 1 1 0 1 1 1 0 Beta-lactamase superfamily domain tRNA-synt_1 PF00133.22 gi|21229069|ref|NP_634991.1| - 1.3e-189 631.3 1.1 1.8e-189 630.9 1.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|21229069|ref|NP_634991.1| - 2e-36 125.3 0.3 5e-36 123.9 0.3 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|21229069|ref|NP_634991.1| - 3.9e-23 81.8 0.3 1.3e-09 37.3 0.0 3.8 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|21229069|ref|NP_634991.1| - 5.2e-05 22.7 0.0 0.00013 21.4 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|21229069|ref|NP_634991.1| - 0.0023 17.5 0.4 0.0093 15.5 0.0 2.2 2 1 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|21229069|ref|NP_634991.1| - 0.0067 15.4 0.0 0.049 12.6 0.0 2.2 2 1 1 3 3 3 1 tRNA synthetases class I (K) IBR PF01485.21 gi|21229069|ref|NP_634991.1| - 0.071 13.3 1.4 0.57 10.5 0.0 2.7 3 0 0 3 3 3 0 IBR domain, a half RING-finger domain V-ATPase_G_2 PF16999.5 gi|21229069|ref|NP_634991.1| - 0.21 12.0 1.4 3.4 8.1 0.9 2.9 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit MAF_flag10 PF01973.18 gi|21229070|ref|NP_634992.1| - 4.5e-25 88.3 0.0 6.1e-25 87.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 zinc_ribbon_13 PF09855.9 gi|21229072|ref|NP_634994.1| - 0.00018 21.6 4.5 0.0014 18.8 4.5 2.0 1 1 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TF_Zn_Ribbon PF08271.12 gi|21229072|ref|NP_634994.1| - 0.00042 19.8 1.1 0.11 12.0 0.1 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding DUF35_N PF12172.8 gi|21229072|ref|NP_634994.1| - 0.0028 17.5 0.3 0.58 10.1 0.1 2.2 2 0 0 2 2 2 2 Rubredoxin-like zinc ribbon domain (DUF35_N) PhnA_Zn_Ribbon PF08274.12 gi|21229072|ref|NP_634994.1| - 0.01 15.8 2.6 0.062 13.3 0.2 2.2 2 0 0 2 2 2 1 PhnA Zinc-Ribbon zf-ribbon_3 PF13248.6 gi|21229072|ref|NP_634994.1| - 0.011 15.1 0.4 0.011 15.1 0.4 2.0 2 0 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|21229072|ref|NP_634994.1| - 0.022 14.5 4.0 0.44 10.3 0.2 2.5 2 0 0 2 2 2 0 A2L zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|21229072|ref|NP_634994.1| - 0.03 14.0 4.2 0.045 13.5 1.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|21229072|ref|NP_634994.1| - 0.038 14.1 3.0 1.5 9.0 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain Zn_ribbon_SprT PF17283.2 gi|21229072|ref|NP_634994.1| - 0.055 13.4 1.1 7.2 6.6 0.1 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Rubredoxin_2 PF18073.1 gi|21229072|ref|NP_634994.1| - 0.13 12.0 7.1 2.4 8.0 0.3 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain Lar_restr_allev PF14354.6 gi|21229072|ref|NP_634994.1| - 0.16 12.4 2.5 0.35 11.3 2.5 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.7 gi|21229072|ref|NP_634994.1| - 0.35 10.9 2.6 1.8 8.6 2.6 2.0 1 1 0 1 1 1 0 Transposase zinc-ribbon domain TFIIS_C PF01096.18 gi|21229072|ref|NP_634994.1| - 0.39 10.6 7.1 2.9 7.8 0.6 2.4 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) zf-TFIIB PF13453.6 gi|21229072|ref|NP_634994.1| - 0.53 9.7 3.9 2.9 7.3 3.9 2.0 1 1 0 1 1 1 0 Transcription factor zinc-finger DUF1936 PF09151.10 gi|21229072|ref|NP_634994.1| - 1.4 8.9 9.0 0.36 10.8 1.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1936) DUF1660 PF07874.11 gi|21229073|ref|NP_634995.1| - 0.029 14.9 0.6 0.039 14.4 0.6 1.3 1 0 0 1 1 1 0 Prophage protein (DUF1660) WRKY PF03106.15 gi|21229073|ref|NP_634995.1| - 0.044 14.0 1.7 0.057 13.7 1.7 1.2 1 0 0 1 1 1 0 WRKY DNA -binding domain AAA_14 PF13173.6 gi|21229074|ref|NP_634996.1| - 7.6e-19 68.0 0.0 1.6e-18 67.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|21229074|ref|NP_634996.1| - 5.2e-07 29.8 0.1 1e-06 28.9 0.1 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|21229074|ref|NP_634996.1| - 0.009 16.0 0.0 0.026 14.5 0.0 1.7 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA PF00004.29 gi|21229074|ref|NP_634996.1| - 0.14 12.6 0.0 0.39 11.2 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CTP_transf_like PF01467.26 gi|21229075|ref|NP_634997.1| - 1.5e-06 28.4 0.0 4.1e-06 27.0 0.0 1.8 2 0 0 2 2 2 1 Cytidylyltransferase-like DUF2204 PF09970.9 gi|21229076|ref|NP_634998.1| - 8.6e-07 28.8 0.1 1.4e-06 28.0 0.1 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF2204) TrmB PF01978.19 gi|21229077|ref|NP_634999.1| - 5.7e-11 42.1 0.8 4.5e-05 23.2 0.1 2.5 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 gi|21229077|ref|NP_634999.1| - 8.7e-07 28.6 0.1 0.00079 19.1 0.0 2.5 2 0 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 gi|21229077|ref|NP_634999.1| - 1.4e-06 28.3 0.0 0.00093 19.2 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn helix HTH_5 PF01022.20 gi|21229077|ref|NP_634999.1| - 3.6e-06 26.7 1.8 0.0038 17.1 0.3 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_28 PF13518.6 gi|21229077|ref|NP_634999.1| - 6.9e-06 26.1 0.0 0.0048 17.0 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain GerE PF00196.19 gi|21229077|ref|NP_634999.1| - 0.00089 18.8 2.8 0.05 13.1 0.6 2.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family Terminase_5 PF06056.12 gi|21229077|ref|NP_634999.1| - 0.0014 18.5 0.0 1.3 9.0 0.0 3.2 3 0 0 3 3 3 1 Putative ATPase subunit of terminase (gpP-like) HTH_24 PF13412.6 gi|21229077|ref|NP_634999.1| - 0.0014 18.1 0.7 0.017 14.7 0.3 2.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TetR_N PF00440.23 gi|21229077|ref|NP_634999.1| - 0.0056 16.4 2.8 0.27 11.1 0.0 3.1 3 0 0 3 3 3 1 Bacterial regulatory proteins, tetR family HTH_36 PF13730.6 gi|21229077|ref|NP_634999.1| - 0.0074 16.2 2.0 0.013 15.4 0.3 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_6 PF01418.17 gi|21229077|ref|NP_634999.1| - 0.0076 16.2 0.1 0.54 10.3 0.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family MarR_2 PF12802.7 gi|21229077|ref|NP_634999.1| - 0.013 15.3 0.0 4.6 7.2 0.0 2.4 2 0 0 2 2 2 0 MarR family HTH_17 PF12728.7 gi|21229077|ref|NP_634999.1| - 0.014 15.6 1.4 4 7.7 0.0 3.0 3 0 0 3 3 2 0 Helix-turn-helix domain HTH_40 PF14493.6 gi|21229077|ref|NP_634999.1| - 0.015 15.7 2.3 0.072 13.6 0.0 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_20 PF12840.7 gi|21229077|ref|NP_634999.1| - 0.022 14.8 0.0 4.2 7.5 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|21229077|ref|NP_634999.1| - 0.032 14.3 0.4 0.47 10.6 0.2 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Rrf2 PF02082.20 gi|21229077|ref|NP_634999.1| - 0.035 14.5 1.3 0.13 12.7 0.2 2.2 2 0 0 2 2 2 0 Transcriptional regulator LacI PF00356.21 gi|21229077|ref|NP_634999.1| - 0.046 13.5 0.1 3.9 7.3 0.0 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family SgrR_N PF12793.7 gi|21229077|ref|NP_634999.1| - 0.06 13.6 0.0 0.092 13.0 0.0 1.4 1 0 0 1 1 1 0 Sugar transport-related sRNA regulator N-term HTH_IclR PF09339.10 gi|21229077|ref|NP_634999.1| - 0.061 13.1 0.0 9 6.2 0.0 2.4 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_22 PF13309.6 gi|21229077|ref|NP_634999.1| - 0.069 13.2 0.2 1.1 9.4 0.0 2.4 2 0 0 2 2 2 0 HTH domain HTH_38 PF13936.6 gi|21229077|ref|NP_634999.1| - 0.074 12.8 0.2 1.2 9.0 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|21229077|ref|NP_634999.1| - 0.082 13.4 0.8 0.55 10.8 0.1 2.3 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_Tnp_1 PF01527.20 gi|21229077|ref|NP_634999.1| - 0.1 12.9 0.0 7.1 7.0 0.0 2.4 2 0 0 2 2 2 0 Transposase HTH_1 PF00126.27 gi|21229077|ref|NP_634999.1| - 0.11 12.4 0.0 0.26 11.3 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Tnp_ISL3 PF13542.6 gi|21229077|ref|NP_634999.1| - 0.12 11.8 0.0 0.69 9.4 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 MarR PF01047.22 gi|21229077|ref|NP_634999.1| - 0.13 12.2 1.7 4.1 7.4 0.2 2.3 2 0 0 2 2 2 0 MarR family HTH_11 PF08279.12 gi|21229077|ref|NP_634999.1| - 0.13 12.2 4.6 0.37 10.8 0.6 2.6 2 0 0 2 2 2 0 HTH domain CDC24 PF06395.11 gi|21229077|ref|NP_634999.1| - 0.18 12.1 0.4 1.1 9.6 0.1 2.3 2 1 1 3 3 3 0 CDC24 Calponin HTH_10 PF04967.12 gi|21229077|ref|NP_634999.1| - 0.21 11.4 1.4 2.2 8.1 0.1 2.4 2 0 0 2 2 2 0 HTH DNA binding domain IF2_N PF04760.15 gi|21229077|ref|NP_634999.1| - 0.62 9.9 3.9 4.8 7.1 0.2 2.6 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region SWI2_SNF2 PF18766.1 gi|21229078|ref|NP_635000.1| - 1.9e-29 102.9 2.3 1e-28 100.6 2.3 2.1 1 1 0 1 1 1 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|21229078|ref|NP_635000.1| - 1.2e-19 71.0 1.2 4e-19 69.3 0.0 2.5 3 0 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|21229078|ref|NP_635000.1| - 1.5e-14 54.4 0.1 4.5e-14 52.8 0.1 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|21229078|ref|NP_635000.1| - 3e-07 30.4 0.0 7.6e-07 29.1 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase THP2 PF09432.10 gi|21229079|ref|NP_635001.1| - 0.028 14.5 0.3 0.091 12.8 0.3 1.9 1 0 0 1 1 1 0 Tho complex subunit THP2 DUF5344 PF17279.2 gi|21229079|ref|NP_635001.1| - 0.051 14.2 0.1 3.8 8.1 0.1 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5344) Methylase_S PF01420.19 gi|21229080|ref|NP_635002.1| - 9.9e-08 32.4 0.1 0.016 15.4 0.0 2.3 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain Spo7_2_N PF15407.6 gi|21229080|ref|NP_635002.1| - 0.025 14.2 0.6 1.6 8.5 0.1 2.5 2 0 0 2 2 2 0 Sporulation protein family 7 TraT PF05818.12 gi|21229080|ref|NP_635002.1| - 0.1 12.3 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein YhcG_C PF06250.11 gi|21229081|ref|NP_635003.1| - 8.1e-52 175.2 0.2 2e-51 173.9 0.2 1.6 1 0 0 1 1 1 1 YhcG PDDEXK nuclease domain DUF1016_N PF17761.1 gi|21229081|ref|NP_635003.1| - 2.1e-45 154.3 0.2 2.9e-45 153.8 0.2 1.2 1 0 0 1 1 1 1 DUF1016 N-terminal domain HTH_ParB PF17762.1 gi|21229081|ref|NP_635003.1| - 0.048 13.5 0.0 0.16 11.8 0.0 1.9 1 0 0 1 1 1 0 HTH domain found in ParB protein N6_Mtase PF02384.16 gi|21229083|ref|NP_635005.1| - 8.4e-52 176.4 0.0 1.3e-51 175.8 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|21229083|ref|NP_635005.1| - 4.9e-22 79.0 2.7 5.1e-22 79.0 0.6 2.2 3 0 0 3 3 3 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|21229083|ref|NP_635005.1| - 0.052 13.2 0.0 0.15 11.7 0.0 1.7 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 AviRa PF11599.8 gi|21229083|ref|NP_635005.1| - 0.068 12.6 0.1 0.45 9.9 0.0 2.1 2 0 0 2 2 2 0 RRNA methyltransferase AviRa Pyridox_ox_2 PF12900.7 gi|21229084|ref|NP_635006.1| - 1.7e-23 83.2 0.0 1.9e-23 83.0 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|21229084|ref|NP_635006.1| - 5.6e-13 48.9 0.0 7.9e-13 48.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|21229084|ref|NP_635006.1| - 0.00033 20.3 0.0 0.00053 19.6 0.0 1.5 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Nitroreductase PF00881.24 gi|21229085|ref|NP_635007.1| - 5.9e-05 23.2 0.0 7.1e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|21229085|ref|NP_635007.1| - 0.0045 16.6 0.1 0.0046 16.5 0.1 1.1 1 0 0 1 1 1 1 Putative TM nitroreductase DUF688 PF05097.12 gi|21229085|ref|NP_635007.1| - 0.037 13.2 0.0 0.04 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF688) Fer4_13 PF13370.6 gi|21229086|ref|NP_635008.1| - 3.1e-20 72.5 6.2 4e-20 72.1 6.2 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|21229086|ref|NP_635008.1| - 1.1e-08 35.7 4.7 1.5e-08 35.3 4.7 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_21 PF14697.6 gi|21229086|ref|NP_635008.1| - 0.0071 16.4 5.8 0.057 13.5 6.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21229086|ref|NP_635008.1| - 0.0073 16.9 4.2 0.018 15.6 4.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229086|ref|NP_635008.1| - 0.022 14.9 3.4 0.026 14.7 2.7 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21229086|ref|NP_635008.1| - 0.026 14.4 8.5 0.29 11.0 0.8 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_19 PF06902.11 gi|21229086|ref|NP_635008.1| - 0.029 14.4 1.2 0.039 14.0 1.2 1.2 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_16 PF13484.6 gi|21229086|ref|NP_635008.1| - 0.037 15.0 4.2 2.6 9.0 1.7 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|21229086|ref|NP_635008.1| - 0.1 12.8 5.5 0.27 11.4 5.7 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21229086|ref|NP_635008.1| - 7.2 7.8 8.4 37 5.6 2.0 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain HTH_5 PF01022.20 gi|21229087|ref|NP_635009.1| - 2.8e-07 30.3 0.8 1.3e-06 28.2 0.2 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21229087|ref|NP_635009.1| - 9.4e-06 25.6 0.3 2.7e-05 24.1 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|21229087|ref|NP_635009.1| - 0.0039 17.2 0.3 0.0098 15.9 0.3 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DUF5344 PF17279.2 gi|21229087|ref|NP_635009.1| - 0.13 12.9 1.6 0.22 12.1 0.5 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5344) VWA_2 PF13519.6 gi|21229089|ref|NP_635011.1| - 3.4e-06 27.6 0.0 4.6e-05 24.0 0.0 2.4 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|21229089|ref|NP_635011.1| - 2.1e-05 24.9 0.0 6.1e-05 23.3 0.0 1.8 2 0 0 2 2 2 1 von Willebrand factor type A domain DUF719 PF05334.13 gi|21229089|ref|NP_635011.1| - 3.6 7.8 7.8 0.35 11.0 2.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF719) AAA_5 PF07728.14 gi|21229090|ref|NP_635012.1| - 4.8e-32 110.8 0.0 6.6e-32 110.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) CbbQ_C PF08406.10 gi|21229090|ref|NP_635012.1| - 6.9e-32 109.6 0.0 2.4e-31 107.8 0.0 1.8 2 0 0 2 2 2 1 CbbQ/NirQ/NorQ C-terminal AAA_22 PF13401.6 gi|21229090|ref|NP_635012.1| - 0.0015 18.8 0.0 0.0026 18.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|21229090|ref|NP_635012.1| - 0.0032 17.9 0.0 0.0052 17.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 gi|21229090|ref|NP_635012.1| - 0.0036 17.2 0.0 0.0056 16.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|21229090|ref|NP_635012.1| - 0.012 15.4 0.0 0.03 14.0 0.0 1.7 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_6 PF12774.7 gi|21229090|ref|NP_635012.1| - 0.019 13.9 0.0 0.035 13.1 0.0 1.4 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Mg_chelatase PF01078.21 gi|21229090|ref|NP_635012.1| - 0.024 14.0 0.0 2.9 7.2 0.0 2.3 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 gi|21229090|ref|NP_635012.1| - 0.024 14.6 0.0 0.064 13.3 0.0 1.8 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|21229090|ref|NP_635012.1| - 0.031 14.6 0.0 0.059 13.8 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 gi|21229090|ref|NP_635012.1| - 0.052 13.1 0.0 0.087 12.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 gi|21229090|ref|NP_635012.1| - 0.13 12.3 0.0 0.31 11.0 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 gi|21229090|ref|NP_635012.1| - 0.15 12.0 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 NACHT domain ResIII PF04851.15 gi|21229090|ref|NP_635012.1| - 0.19 11.7 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Radical_SAM PF04055.21 gi|21229091|ref|NP_635013.1| - 3.7e-06 27.4 3.7 3.7e-06 27.4 0.3 2.4 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|21229091|ref|NP_635013.1| - 0.0049 17.2 1.6 0.019 15.2 1.6 1.9 1 1 0 1 1 1 1 4Fe-4S single cluster domain zf-tcix PF14952.6 gi|21229091|ref|NP_635013.1| - 3.1 7.5 10.9 6.6 6.4 0.4 2.6 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding HisKA_2 PF07568.12 gi|21229092|ref|NP_635014.1| - 7.6e-27 93.2 0.2 1.8e-26 92.0 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.12 gi|21229092|ref|NP_635014.1| - 1.4e-16 60.5 0.0 3e-16 59.5 0.0 1.6 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|21229092|ref|NP_635014.1| - 2.8e-11 43.9 0.0 1.1e-10 42.0 0.0 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|21229092|ref|NP_635014.1| - 1.8e-06 28.5 0.0 3.6e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 HWE histidine kinase PAS_9 PF13426.7 gi|21229092|ref|NP_635014.1| - 0.0013 18.9 0.1 0.0072 16.6 0.0 2.2 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.6 gi|21229092|ref|NP_635014.1| - 0.016 15.2 0.0 0.031 14.2 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain SPOB_a PF14689.6 gi|21229092|ref|NP_635014.1| - 0.062 13.0 0.0 0.15 11.8 0.0 1.6 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain Nitroreductase PF00881.24 gi|21229094|ref|NP_635016.1| - 1.4e-21 77.3 0.0 1.6e-21 77.1 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|21229094|ref|NP_635016.1| - 0.00066 19.3 0.0 0.00075 19.1 0.0 1.1 1 0 0 1 1 1 1 Putative TM nitroreductase His_Phos_1 PF00300.22 gi|21229095|ref|NP_635017.1| - 2.3e-37 128.6 0.0 2.9e-20 72.8 0.0 2.0 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) DUF4110 PF13422.6 gi|21229095|ref|NP_635017.1| - 0.025 14.6 0.0 0.068 13.3 0.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4110) HD PF01966.22 gi|21229096|ref|NP_635018.1| - 1.5e-07 31.6 1.1 2.3e-07 31.0 1.1 1.4 1 0 0 1 1 1 1 HD domain PepSY PF03413.19 gi|21229097|ref|NP_635019.1| - 2.4e-09 37.6 2.4 0.00086 19.8 0.1 4.1 3 3 0 3 3 3 2 Peptidase propeptide and YPEB domain RNA_polI_A14 PF08203.11 gi|21229097|ref|NP_635019.1| - 0.098 13.4 0.4 6.2 7.6 0.0 2.5 2 0 0 2 2 2 0 Yeast RNA polymerase I subunit RPA14 PepSY PF03413.19 gi|21229098|ref|NP_635020.1| - 7e-08 32.9 1.1 0.0026 18.3 0.3 3.7 3 2 0 3 3 3 3 Peptidase propeptide and YPEB domain Peptidase_C25 PF01364.18 gi|21229099|ref|NP_635021.1| - 0.074 12.2 0.9 0.084 12.0 0.9 1.1 1 0 0 1 1 1 0 Peptidase family C25 CHAT PF12770.7 gi|21229099|ref|NP_635021.1| - 0.074 12.4 0.0 0.097 12.1 0.0 1.1 1 0 0 1 1 1 0 CHAT domain DDE_3 PF13358.6 gi|21229100|ref|NP_635022.1| - 2.4e-28 98.7 0.2 3.1e-28 98.4 0.2 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF287 PF03384.14 gi|21229100|ref|NP_635022.1| - 0.058 13.8 0.7 0.058 13.8 0.7 2.1 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 HTH_32 PF13565.6 gi|21229101|ref|NP_635023.1| - 1.8e-12 47.7 0.2 1.1e-11 45.2 0.0 1.9 1 1 1 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.6 gi|21229101|ref|NP_635023.1| - 5.6e-10 38.7 0.1 1.4e-09 37.5 0.1 1.7 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 gi|21229101|ref|NP_635023.1| - 5.2e-08 32.8 0.0 1.1e-07 31.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.6 gi|21229101|ref|NP_635023.1| - 6e-07 29.5 0.0 1.3e-06 28.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 gi|21229101|ref|NP_635023.1| - 0.00016 21.7 0.4 0.00093 19.2 0.5 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_5 PF01022.20 gi|21229101|ref|NP_635023.1| - 0.0053 16.6 0.2 0.01 15.7 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|21229101|ref|NP_635023.1| - 0.016 15.1 0.0 0.53 10.2 0.0 2.2 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|21229101|ref|NP_635023.1| - 0.054 13.1 0.5 0.12 12.0 0.3 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding LZ_Tnp_IS481 PF13011.6 gi|21229101|ref|NP_635023.1| - 0.079 13.5 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 ResIII PF04851.15 gi|21229102|ref|NP_635024.1| - 1.4e-27 96.8 0.0 5.8e-27 94.8 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 gi|21229102|ref|NP_635024.1| - 5.8e-21 74.8 0.3 9.2e-21 74.2 0.3 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase XPB_DRD PF18458.1 gi|21229102|ref|NP_635024.1| - 3.2e-20 71.8 0.0 2.3e-19 69.0 0.0 2.5 3 0 0 3 3 3 1 Xeroderma pigmentosum group B helicase damage recognition domain Helicase_C PF00271.31 gi|21229102|ref|NP_635024.1| - 1.2e-16 61.0 0.2 6.3e-16 58.7 0.3 2.2 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|21229102|ref|NP_635024.1| - 7.7e-07 29.0 0.0 3.6e-06 26.9 0.0 2.1 1 1 0 1 1 1 1 DEAD/DEAH box helicase CBS PF00571.28 gi|21229102|ref|NP_635024.1| - 0.13 12.7 0.0 2 8.9 0.0 2.6 2 0 0 2 2 2 0 CBS domain DUF790 PF05626.11 gi|21229103|ref|NP_635025.1| - 1.1e-113 379.9 3.5 9.2e-79 264.9 0.2 3.0 1 1 0 2 2 2 2 Protein of unknown function (DUF790) Acetyltransf_10 PF13673.7 gi|21229107|ref|NP_635029.1| - 3e-17 62.8 0.2 3.4e-17 62.6 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21229107|ref|NP_635029.1| - 1.6e-12 47.7 0.2 1.9e-12 47.4 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21229107|ref|NP_635029.1| - 2.4e-08 34.3 0.4 3.4e-08 33.8 0.4 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_5 PF13444.6 gi|21229107|ref|NP_635029.1| - 0.00046 20.8 0.1 0.036 14.8 0.0 2.2 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21229107|ref|NP_635029.1| - 0.00081 19.3 0.1 0.0012 18.8 0.1 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|21229107|ref|NP_635029.1| - 0.0044 17.1 0.1 0.054 13.6 0.1 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|21229107|ref|NP_635029.1| - 0.031 14.4 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain ATPase PF06745.13 gi|21229108|ref|NP_635030.1| - 1.6e-61 207.6 0.0 1.8e-61 207.4 0.0 1.0 1 0 0 1 1 1 1 KaiC GvpD PF07088.11 gi|21229108|ref|NP_635030.1| - 6.8e-05 21.7 0.2 0.06 12.0 0.0 2.3 2 1 0 2 2 2 2 GvpD gas vesicle protein RecA PF00154.21 gi|21229108|ref|NP_635030.1| - 0.0033 16.9 0.0 0.0046 16.4 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Rad51 PF08423.11 gi|21229108|ref|NP_635030.1| - 0.0039 16.5 0.1 0.011 15.0 0.0 1.9 2 0 0 2 2 2 1 Rad51 DUF2075 PF09848.9 gi|21229108|ref|NP_635030.1| - 0.0057 15.9 0.0 0.0095 15.2 0.0 1.4 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 gi|21229108|ref|NP_635030.1| - 0.0061 16.6 0.0 0.012 15.6 0.0 1.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DnaB_C PF03796.15 gi|21229108|ref|NP_635030.1| - 0.042 13.2 0.0 0.069 12.5 0.0 1.4 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain AAA_25 PF13481.6 gi|21229108|ref|NP_635030.1| - 0.055 13.0 0.0 0.11 12.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|21229108|ref|NP_635030.1| - 0.071 13.4 1.0 1.7 8.9 1.0 2.3 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 gi|21229108|ref|NP_635030.1| - 0.086 12.5 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_14 PF13173.6 gi|21229108|ref|NP_635030.1| - 0.11 12.5 0.0 0.87 9.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain MEDS PF14417.6 gi|21229108|ref|NP_635030.1| - 0.13 12.1 0.0 0.3 10.9 0.0 1.6 1 1 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain Zot PF05707.12 gi|21229108|ref|NP_635030.1| - 0.15 11.7 0.1 0.92 9.1 0.1 1.9 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_16 PF13191.6 gi|21229108|ref|NP_635030.1| - 0.17 12.2 0.0 0.47 10.8 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain MetOD1 PF18546.1 gi|21229109|ref|NP_635031.1| - 1.5e-46 158.2 0.6 2e-46 157.8 0.6 1.2 1 0 0 1 1 1 1 Metanogen output domain 1 Response_reg PF00072.24 gi|21229109|ref|NP_635031.1| - 3.5e-29 101.2 0.2 6.2e-29 100.4 0.2 1.4 1 0 0 1 1 1 1 Response regulator receiver domain DUF3939 PF13075.6 gi|21229109|ref|NP_635031.1| - 0.025 14.6 0.1 0.047 13.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3939) CPL PF08144.11 gi|21229109|ref|NP_635031.1| - 0.099 13.0 0.1 1.5 9.2 0.0 2.2 2 0 0 2 2 2 0 CPL (NUC119) domain ATPase PF06745.13 gi|21229110|ref|NP_635032.1| - 3.9e-44 150.7 0.2 4.3e-44 150.6 0.2 1.0 1 0 0 1 1 1 1 KaiC RecA PF00154.21 gi|21229110|ref|NP_635032.1| - 4.1e-08 33.0 0.3 1.5e-06 27.9 0.0 2.1 2 0 0 2 2 2 1 recA bacterial DNA recombination protein GvpD PF07088.11 gi|21229110|ref|NP_635032.1| - 1.8e-05 23.6 0.1 2.9e-05 22.9 0.1 1.2 1 1 0 1 1 1 1 GvpD gas vesicle protein AAA_25 PF13481.6 gi|21229110|ref|NP_635032.1| - 2.4e-05 24.0 0.4 0.00025 20.7 0.4 2.1 1 1 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|21229110|ref|NP_635032.1| - 2.4e-05 23.8 0.0 9.3e-05 21.9 0.0 1.9 2 1 0 2 2 2 1 DnaB-like helicase C terminal domain IstB_IS21 PF01695.17 gi|21229110|ref|NP_635032.1| - 2.7e-05 24.0 0.3 0.0016 18.2 0.0 2.3 2 1 0 2 2 2 1 IstB-like ATP binding protein NTPase_1 PF03266.15 gi|21229110|ref|NP_635032.1| - 8.2e-05 22.6 1.5 0.00066 19.6 1.5 2.1 1 1 0 1 1 1 1 NTPase cobW PF02492.19 gi|21229110|ref|NP_635032.1| - 0.00015 21.4 0.8 0.00095 18.8 0.5 2.1 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 gi|21229110|ref|NP_635032.1| - 0.00022 20.6 0.0 0.00025 20.4 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 gi|21229110|ref|NP_635032.1| - 0.00024 21.5 0.0 0.00031 21.2 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|21229110|ref|NP_635032.1| - 0.00027 21.2 0.2 0.0012 19.1 0.2 2.0 1 1 0 1 1 1 1 AAA domain DUF835 PF05763.12 gi|21229110|ref|NP_635032.1| - 0.00062 19.5 0.6 0.0015 18.3 0.5 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF835) DEAD PF00270.29 gi|21229110|ref|NP_635032.1| - 0.00068 19.5 0.0 0.0012 18.6 0.0 1.5 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_5 PF07728.14 gi|21229110|ref|NP_635032.1| - 0.00098 19.1 0.0 0.0018 18.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|21229110|ref|NP_635032.1| - 0.0034 17.8 0.0 0.025 15.0 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|21229110|ref|NP_635032.1| - 0.0069 16.1 0.7 0.021 14.6 0.7 1.8 1 1 0 1 1 1 1 AAA domain Zot PF05707.12 gi|21229110|ref|NP_635032.1| - 0.021 14.5 0.0 0.22 11.1 0.0 2.1 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) T2SSE PF00437.20 gi|21229110|ref|NP_635032.1| - 0.024 13.7 0.0 0.038 13.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_18 PF13238.6 gi|21229110|ref|NP_635032.1| - 0.035 14.7 0.3 0.071 13.6 0.3 1.7 1 1 0 1 1 1 0 AAA domain Guanylate_kin PF00625.21 gi|21229110|ref|NP_635032.1| - 0.062 13.0 0.1 0.23 11.1 0.1 1.9 1 1 0 1 1 1 0 Guanylate kinase AAA_19 PF13245.6 gi|21229110|ref|NP_635032.1| - 0.096 13.0 0.1 0.14 12.5 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 gi|21229110|ref|NP_635032.1| - 0.11 12.3 0.5 0.37 10.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|21229110|ref|NP_635032.1| - 0.11 12.6 0.1 0.32 11.0 0.0 2.0 1 1 0 1 1 1 0 AAA domain MEDS PF14417.6 gi|21229110|ref|NP_635032.1| - 0.11 12.3 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain ResIII PF04851.15 gi|21229110|ref|NP_635032.1| - 0.11 12.4 0.0 0.17 11.9 0.0 1.4 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Peptidase_M50 PF02163.22 gi|21229111|ref|NP_635033.1| - 1.5e-20 73.5 0.0 2e-19 69.8 0.0 2.3 1 1 0 1 1 1 1 Peptidase family M50 PDZ_2 PF13180.6 gi|21229111|ref|NP_635033.1| - 5e-17 62.0 0.1 8.7e-10 38.8 0.1 2.3 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 gi|21229111|ref|NP_635033.1| - 5.9e-09 35.6 0.0 0.0037 17.1 0.0 2.5 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 gi|21229111|ref|NP_635033.1| - 0.00046 20.5 0.1 1.2 9.6 0.0 2.4 2 0 0 2 2 2 2 PDZ domain MaoC_dehydratas PF01575.19 gi|21229111|ref|NP_635033.1| - 0.17 11.5 0.0 0.4 10.3 0.0 1.6 1 0 0 1 1 1 0 MaoC like domain CutA1 PF03091.15 gi|21229112|ref|NP_635034.1| - 2.1e-31 107.7 0.2 2.3e-31 107.6 0.2 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein FixG_C PF11614.8 gi|21229113|ref|NP_635035.1| - 0.0026 18.0 0.0 0.005 17.0 0.0 1.4 1 0 0 1 1 1 1 IG-like fold at C-terminal of FixG, putative oxidoreductase NPCBM_assoc PF10633.9 gi|21229113|ref|NP_635035.1| - 0.029 14.6 0.0 0.064 13.5 0.0 1.6 1 0 0 1 1 1 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF3402 PF11882.8 gi|21229113|ref|NP_635035.1| - 0.036 13.2 0.2 0.045 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3402) YtxH PF12732.7 gi|21229113|ref|NP_635035.1| - 0.22 12.1 4.6 0.81 10.3 3.2 2.4 1 1 1 2 2 2 0 YtxH-like protein DUF948 PF06103.11 gi|21229113|ref|NP_635035.1| - 0.22 11.8 0.9 1.6 9.0 0.1 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF2117 PF09890.9 gi|21229114|ref|NP_635036.1| - 8.1e-68 228.0 0.0 1.1e-67 227.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) FtsX PF02687.21 gi|21229115|ref|NP_635037.1| - 6.2e-14 52.2 2.3 6.2e-14 52.2 2.3 2.1 2 0 0 2 2 2 1 FtsX-like permease family MacB_PCD PF12704.7 gi|21229115|ref|NP_635037.1| - 1.7e-11 44.8 0.0 1.7e-11 44.8 0.0 1.5 2 0 0 2 2 2 1 MacB-like periplasmic core domain SUR7 PF06687.12 gi|21229115|ref|NP_635037.1| - 0.16 11.6 1.4 0.36 10.4 1.6 1.3 1 1 0 1 1 1 0 SUR7/PalI family DUF3344 PF11824.8 gi|21229116|ref|NP_635038.1| - 7.3e-28 98.0 2.1 8.7e-28 97.7 2.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) MetallophosC PF16370.5 gi|21229116|ref|NP_635038.1| - 0.075 13.3 0.0 0.22 11.8 0.0 1.7 2 0 0 2 2 2 0 C terminal of Calcineurin-like phosphoesterase NPCBM_assoc PF10633.9 gi|21229117|ref|NP_635039.1| - 0.013 15.8 0.0 4 7.8 0.0 2.9 2 1 1 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase ABC_cobalt PF09819.9 gi|21229117|ref|NP_635039.1| - 0.72 10.0 20.4 0.076 13.2 13.9 2.5 2 1 1 3 3 3 0 ABC-type cobalt transport system, permease component ABC_tran PF00005.27 gi|21229118|ref|NP_635040.1| - 1.9e-61 206.6 0.1 2.4e-32 112.3 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|21229118|ref|NP_635040.1| - 7.8e-12 45.6 9.6 0.0031 17.4 0.2 4.2 2 2 2 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21229118|ref|NP_635040.1| - 8.8e-11 41.7 1.3 0.00019 21.0 0.2 3.6 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|21229118|ref|NP_635040.1| - 9.2e-11 42.4 0.8 5.9e-05 23.5 0.1 2.8 2 2 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|21229118|ref|NP_635040.1| - 1.6e-08 34.9 0.8 0.004 17.4 0.3 3.4 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|21229118|ref|NP_635040.1| - 1.5e-07 31.0 0.0 0.0034 17.1 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|21229118|ref|NP_635040.1| - 2e-07 30.8 0.1 0.023 14.2 0.0 3.9 4 1 0 4 4 4 2 AAA domain RsgA_GTPase PF03193.16 gi|21229118|ref|NP_635040.1| - 2.6e-07 30.7 0.1 0.0031 17.4 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_23 PF13476.6 gi|21229118|ref|NP_635040.1| - 4.6e-06 27.3 0.1 0.056 14.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain TniB PF05621.11 gi|21229118|ref|NP_635040.1| - 7.5e-06 25.5 2.9 0.88 8.9 0.0 4.8 3 2 2 5 5 5 2 Bacterial TniB protein AAA_33 PF13671.6 gi|21229118|ref|NP_635040.1| - 2.6e-05 24.4 0.0 0.2 11.8 0.0 2.8 3 0 0 3 3 2 2 AAA domain AAA PF00004.29 gi|21229118|ref|NP_635040.1| - 3.6e-05 24.2 0.6 0.13 12.7 0.0 3.6 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|21229118|ref|NP_635040.1| - 6.1e-05 23.0 1.2 0.0043 17.0 0.0 2.9 3 0 0 3 3 3 1 Rad17 P-loop domain AAA_5 PF07728.14 gi|21229118|ref|NP_635040.1| - 6.5e-05 23.0 0.2 0.12 12.4 0.0 3.0 3 0 0 3 3 2 1 AAA domain (dynein-related subfamily) NACHT PF05729.12 gi|21229118|ref|NP_635040.1| - 9.2e-05 22.4 1.3 0.49 10.3 0.0 3.2 4 0 0 4 4 3 2 NACHT domain Mg_chelatase PF01078.21 gi|21229118|ref|NP_635040.1| - 0.00014 21.4 0.3 0.034 13.5 0.0 2.6 3 0 0 3 3 2 1 Magnesium chelatase, subunit ChlI AAA_15 PF13175.6 gi|21229118|ref|NP_635040.1| - 0.00015 21.6 0.4 0.15 11.8 0.1 2.4 2 0 0 2 2 2 2 AAA ATPase domain AAA_24 PF13479.6 gi|21229118|ref|NP_635040.1| - 0.0002 21.1 1.2 2.2 8.0 0.0 3.9 5 0 0 5 5 4 1 AAA domain TsaE PF02367.17 gi|21229118|ref|NP_635040.1| - 0.00027 20.9 0.0 1.1 9.3 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_ATPase PF09818.9 gi|21229118|ref|NP_635040.1| - 0.00051 18.9 0.0 0.35 9.6 0.0 3.0 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA_18 PF13238.6 gi|21229118|ref|NP_635040.1| - 0.00058 20.4 2.6 0.45 11.1 0.0 3.5 4 1 0 4 4 2 1 AAA domain AAA_7 PF12775.7 gi|21229118|ref|NP_635040.1| - 0.0016 18.0 0.0 0.51 9.8 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|21229118|ref|NP_635040.1| - 0.0017 18.7 0.1 0.78 10.2 0.0 2.4 2 0 0 2 2 2 1 RNA helicase G-alpha PF00503.20 gi|21229118|ref|NP_635040.1| - 0.002 17.4 0.1 1.8 7.6 0.0 2.2 2 0 0 2 2 2 2 G-protein alpha subunit AAA_30 PF13604.6 gi|21229118|ref|NP_635040.1| - 0.002 17.9 0.0 1.7 8.3 0.0 2.7 2 2 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|21229118|ref|NP_635040.1| - 0.0029 16.8 0.1 1.7 7.8 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain Zeta_toxin PF06414.12 gi|21229118|ref|NP_635040.1| - 0.0046 16.3 0.0 0.8 8.9 0.0 2.5 2 0 0 2 2 2 1 Zeta toxin IstB_IS21 PF01695.17 gi|21229118|ref|NP_635040.1| - 0.0052 16.5 0.2 4.5 7.0 0.0 3.1 4 0 0 4 4 3 0 IstB-like ATP binding protein AAA_14 PF13173.6 gi|21229118|ref|NP_635040.1| - 0.0056 16.7 0.1 7 6.7 0.0 3.0 3 0 0 3 3 2 0 AAA domain SbcCD_C PF13558.6 gi|21229118|ref|NP_635040.1| - 0.016 15.4 2.1 1.2 9.5 0.1 3.8 3 2 0 3 3 2 0 Putative exonuclease SbcCD, C subunit APS_kinase PF01583.20 gi|21229118|ref|NP_635040.1| - 0.016 15.1 0.1 5 7.0 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_28 PF13521.6 gi|21229118|ref|NP_635040.1| - 0.016 15.4 0.4 5.3 7.3 0.0 2.9 3 0 0 3 3 3 0 AAA domain HeH PF12949.7 gi|21229118|ref|NP_635040.1| - 0.017 14.8 0.0 0.068 12.9 0.0 2.0 2 0 0 2 2 1 0 HeH/LEM domain SRP54 PF00448.22 gi|21229118|ref|NP_635040.1| - 0.024 14.2 0.0 0.31 10.6 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain ATPase_2 PF01637.18 gi|21229118|ref|NP_635040.1| - 0.026 14.4 0.1 1.1 9.2 0.0 2.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Roc PF08477.13 gi|21229118|ref|NP_635040.1| - 0.048 13.9 0.0 5.1 7.3 0.0 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase DUF815 PF05673.13 gi|21229118|ref|NP_635040.1| - 0.056 12.6 0.1 0.2 10.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) SAP PF02037.27 gi|21229118|ref|NP_635040.1| - 0.058 13.2 0.0 0.37 10.6 0.0 2.4 2 0 0 2 2 2 0 SAP domain Sigma54_activat PF00158.26 gi|21229118|ref|NP_635040.1| - 0.065 12.9 0.0 10 5.8 0.0 2.6 2 0 0 2 2 2 0 Sigma-54 interaction domain T2SSE PF00437.20 gi|21229118|ref|NP_635040.1| - 0.072 12.1 0.0 6 5.8 0.0 2.5 2 0 0 2 2 2 0 Type II/IV secretion system protein NTPase_1 PF03266.15 gi|21229118|ref|NP_635040.1| - 0.072 13.0 0.5 7.7 6.4 0.0 3.3 3 0 0 3 3 3 0 NTPase cobW PF02492.19 gi|21229118|ref|NP_635040.1| - 0.073 12.7 0.1 5.4 6.6 0.1 2.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 gi|21229118|ref|NP_635040.1| - 0.076 12.3 0.3 2.9 7.2 0.0 3.0 4 0 0 4 4 3 0 KaiC PduV-EutP PF10662.9 gi|21229118|ref|NP_635040.1| - 0.14 11.9 0.0 17 5.1 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation MMR_HSR1 PF01926.23 gi|21229118|ref|NP_635040.1| - 0.16 12.1 0.6 15 5.7 0.1 2.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_19 PF13245.6 gi|21229118|ref|NP_635040.1| - 0.16 12.3 0.1 9 6.6 0.0 2.8 3 0 0 3 3 3 0 AAA domain ATP_bind_1 PF03029.17 gi|21229118|ref|NP_635040.1| - 0.19 11.5 0.1 25 4.5 0.0 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 gi|21229118|ref|NP_635040.1| - 0.19 11.2 0.0 0.66 9.5 0.0 1.9 3 0 0 3 3 1 0 Elongation factor Tu GTP binding domain PRK PF00485.18 gi|21229118|ref|NP_635040.1| - 0.2 11.4 0.0 1.6 8.4 0.0 2.1 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family CPT PF07931.12 gi|21229118|ref|NP_635040.1| - 0.21 11.4 0.0 0.75 9.6 0.0 1.9 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein CbiQ PF02361.16 gi|21229119|ref|NP_635041.1| - 3.2e-25 89.0 8.6 4.8e-25 88.5 8.6 1.2 1 0 0 1 1 1 1 Cobalt transport protein DUF3344 PF11824.8 gi|21229120|ref|NP_635042.1| - 5e-69 233.0 1.3 5.9e-69 232.8 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) WW_1 PF18507.1 gi|21229120|ref|NP_635042.1| - 0.11 12.2 0.0 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 WW domain DUF3344 PF11824.8 gi|21229121|ref|NP_635043.1| - 6.8e-40 137.4 0.4 1.5e-39 136.3 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|21229121|ref|NP_635043.1| - 4.5e-34 116.8 2.4 3.1e-19 69.1 5.2 2.5 2 0 0 2 2 2 2 CARDB Lysyl_oxidase PF01186.17 gi|21229121|ref|NP_635043.1| - 0.00035 20.3 2.3 0.062 13.0 1.3 2.3 2 0 0 2 2 2 2 Lysyl oxidase EF-hand_5 PF13202.6 gi|21229121|ref|NP_635043.1| - 0.085 12.4 2.5 0.31 10.6 2.5 1.9 1 0 0 1 1 1 0 EF hand EF-hand_1 PF00036.32 gi|21229121|ref|NP_635043.1| - 0.17 11.5 1.1 0.62 9.8 1.1 2.0 1 0 0 1 1 1 0 EF hand DUF3344 PF11824.8 gi|21229122|ref|NP_635044.1| - 8.4e-69 232.3 2.5 9.6e-69 232.1 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) ABC_tran PF00005.27 gi|21229123|ref|NP_635045.1| - 3.8e-33 114.9 0.0 5.3e-33 114.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|21229123|ref|NP_635045.1| - 2.6e-08 33.6 0.1 1.9e-05 24.2 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|21229123|ref|NP_635045.1| - 7.6e-08 32.5 0.0 0.0036 17.2 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|21229123|ref|NP_635045.1| - 5.5e-05 23.1 0.0 9.1e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 gi|21229123|ref|NP_635045.1| - 0.00012 21.8 0.0 0.00067 19.4 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|21229123|ref|NP_635045.1| - 0.00018 21.9 0.0 0.00026 21.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 gi|21229123|ref|NP_635045.1| - 0.0073 16.0 0.0 0.4 10.3 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|21229123|ref|NP_635045.1| - 0.075 13.5 0.2 2.1 8.7 0.2 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|21229123|ref|NP_635045.1| - 0.11 12.8 0.0 0.61 10.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|21229123|ref|NP_635045.1| - 0.11 11.6 0.1 0.35 10.0 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain ATPase_2 PF01637.18 gi|21229123|ref|NP_635045.1| - 0.12 12.3 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_33 PF13671.6 gi|21229123|ref|NP_635045.1| - 0.21 11.7 0.5 0.3 11.2 0.5 1.7 1 1 0 1 1 1 0 AAA domain DUF11 PF01345.18 gi|21229124|ref|NP_635046.1| - 0.014 15.7 0.0 0.039 14.2 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function DUF11 Top6b_C PF18000.1 gi|21229124|ref|NP_635046.1| - 0.025 14.7 0.0 0.083 13.1 0.0 1.9 1 0 0 1 1 1 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain DUF4139 PF13598.6 gi|21229124|ref|NP_635046.1| - 0.16 11.7 0.0 0.33 10.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) DUF3344 PF11824.8 gi|21229125|ref|NP_635047.1| - 2.4e-49 168.4 5.5 2.4e-49 168.4 5.5 2.2 2 1 1 3 3 3 1 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|21229125|ref|NP_635047.1| - 2.8e-21 75.7 1.1 7.8e-21 74.3 0.2 2.2 2 0 0 2 2 2 1 CARDB Big_7 PF17957.1 gi|21229125|ref|NP_635047.1| - 0.0017 19.1 2.7 0.044 14.5 0.5 3.4 3 0 0 3 3 3 1 Bacterial Ig domain DUF3344 PF11824.8 gi|21229126|ref|NP_635048.1| - 7.4e-137 455.5 38.8 2.5e-70 237.3 12.2 3.8 4 0 0 4 4 4 2 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|21229126|ref|NP_635048.1| - 2.8e-19 69.3 2.3 2.8e-19 69.3 2.3 4.7 3 2 1 4 4 4 1 CARDB Staphylokinase PF02821.16 gi|21229127|ref|NP_635049.1| - 0.11 12.9 0.1 4.3 7.8 0.0 2.3 2 0 0 2 2 2 0 Staphylokinase/Streptokinase family MBG_2 PF18676.1 gi|21229127|ref|NP_635049.1| - 4.8 7.9 7.9 0.33 11.6 1.1 2.6 3 1 0 3 3 3 0 MBG domain (YGX type) Lactonase PF10282.9 gi|21229128|ref|NP_635050.1| - 1.1e-17 64.4 10.2 3.1e-08 33.3 0.5 3.5 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|21229128|ref|NP_635050.1| - 1e-16 60.5 10.2 8e-07 27.9 0.8 3.2 1 1 2 3 3 3 3 Cytochrome D1 heme domain SGL PF08450.12 gi|21229128|ref|NP_635050.1| - 1.2e-11 44.7 13.9 0.00084 19.0 2.8 4.8 1 1 2 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|21229128|ref|NP_635050.1| - 1.7e-11 43.5 20.3 0.037 14.1 0.2 7.1 6 0 0 6 6 6 5 NHL repeat Arylesterase PF01731.20 gi|21229128|ref|NP_635050.1| - 2.3e-10 40.5 16.0 0.076 13.2 0.3 6.5 2 1 4 7 7 6 4 Arylesterase PD40 PF07676.12 gi|21229128|ref|NP_635050.1| - 7.4e-07 28.9 0.1 2.9 7.9 0.0 5.7 6 0 0 6 6 6 2 WD40-like Beta Propeller Repeat Glu_cyclase_2 PF05096.12 gi|21229128|ref|NP_635050.1| - 5.5e-05 22.7 0.2 0.01 15.3 0.0 2.6 1 1 1 2 2 2 1 Glutamine cyclotransferase PQQ_2 PF13360.6 gi|21229128|ref|NP_635050.1| - 0.00012 21.8 10.3 0.0048 16.5 0.9 2.6 1 1 0 2 2 2 2 PQQ-like domain Str_synth PF03088.16 gi|21229128|ref|NP_635050.1| - 0.00019 21.5 0.4 17 5.6 0.0 5.3 4 2 2 6 6 6 0 Strictosidine synthase DUF1513 PF07433.11 gi|21229128|ref|NP_635050.1| - 0.0012 18.0 5.4 0.031 13.4 0.5 3.4 1 1 2 4 4 4 1 Protein of unknown function (DUF1513) Arm-DNA-bind_3 PF13356.6 gi|21229128|ref|NP_635050.1| - 0.014 15.8 0.0 34 4.9 0.0 4.9 1 1 2 3 3 3 0 Arm DNA-binding domain Svf1 PF08622.10 gi|21229128|ref|NP_635050.1| - 0.066 13.3 3.4 14 5.7 0.1 4.1 1 1 3 4 4 4 0 Svf1-like N-terminal lipocalin domain Kelch_3 PF13415.6 gi|21229128|ref|NP_635050.1| - 0.12 12.7 10.4 12 6.3 0.0 5.8 6 0 0 6 6 6 0 Galactose oxidase, central domain PBCV_basic_adap PF08789.10 gi|21229128|ref|NP_635050.1| - 0.9 9.7 8.8 33 4.7 0.0 4.8 6 0 0 6 6 6 0 PBCV-specific basic adaptor domain DUF4277 PF14104.6 gi|21229129|ref|NP_635051.1| - 4.8e-44 149.2 0.0 9.4e-44 148.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|21229129|ref|NP_635051.1| - 3e-18 66.3 3.5 2.6e-17 63.2 3.5 2.0 1 1 0 1 1 1 1 Transposase DDE domain DUF2887 PF11103.8 gi|21229129|ref|NP_635051.1| - 0.02 14.9 2.6 0.049 13.6 2.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2887) Ntox15 PF15604.6 gi|21229129|ref|NP_635051.1| - 3.2 7.9 5.9 1.2 9.2 2.8 1.9 1 1 1 2 2 2 0 Novel toxin 15 dCMP_cyt_deam_1 PF00383.23 gi|21229130|ref|NP_635052.1| - 3.1e-18 65.5 0.0 4.2e-18 65.1 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|21229130|ref|NP_635052.1| - 3.3e-12 46.3 0.0 4.1e-12 46.0 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase Bd3614-deam PF14439.6 gi|21229130|ref|NP_635052.1| - 0.019 15.0 0.0 0.034 14.2 0.0 1.4 1 0 0 1 1 1 0 Bd3614-like deaminase Glyoxalase PF00903.25 gi|21229131|ref|NP_635053.1| - 3e-14 53.3 0.0 3.3e-14 53.2 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|21229131|ref|NP_635053.1| - 0.00031 21.0 0.0 0.00038 20.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CxxCxxCC PF03692.15 gi|21229132|ref|NP_635054.1| - 5.3e-09 36.7 7.2 8.7e-09 36.0 6.7 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain DUF148 PF02520.17 gi|21229132|ref|NP_635054.1| - 0.06 13.5 1.1 0.44 10.7 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF148 zf-CDGSH PF09360.10 gi|21229134|ref|NP_635056.1| - 1.3e-38 130.9 2.5 2.2e-19 69.4 0.3 2.6 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 gi|21229134|ref|NP_635056.1| - 3.3e-12 46.3 0.0 8.5e-12 45.0 0.0 1.7 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster zf-UBR PF02207.20 gi|21229134|ref|NP_635056.1| - 0.15 12.2 2.6 14 6.0 0.1 2.5 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Stevor PF17410.2 gi|21229136|ref|NP_635058.1| - 0.0044 16.6 0.3 0.0044 16.6 0.3 1.5 2 0 0 2 2 2 1 Subtelomeric Variable Open Reading frame RIFIN PF02009.16 gi|21229136|ref|NP_635058.1| - 0.0087 16.0 0.2 0.012 15.5 0.2 1.2 1 0 0 1 1 1 1 Rifin TMEM154 PF15102.6 gi|21229136|ref|NP_635058.1| - 0.075 12.9 0.6 0.097 12.6 0.1 1.6 2 0 0 2 2 2 0 TMEM154 protein family DUF2070 PF09843.9 gi|21229136|ref|NP_635058.1| - 0.54 8.5 11.8 0.59 8.4 11.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3810 PF12725.7 gi|21229136|ref|NP_635058.1| - 1.6 8.0 10.4 1.8 7.8 10.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) UPF0560 PF10577.9 gi|21229136|ref|NP_635058.1| - 4.9 5.5 4.0 0.85 8.0 0.8 1.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0560 Acetyltransf_10 PF13673.7 gi|21229138|ref|NP_635060.1| - 1.1e-10 41.5 0.0 2.8e-09 37.0 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21229138|ref|NP_635060.1| - 9.1e-09 35.6 0.0 1.2e-08 35.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21229138|ref|NP_635060.1| - 3.4e-07 30.6 0.2 5.8e-07 29.9 0.2 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|21229138|ref|NP_635060.1| - 0.042 13.8 0.1 0.094 12.7 0.1 1.5 1 1 0 1 1 1 0 FR47-like protein Y1_Tnp PF01797.16 gi|21229139|ref|NP_635061.1| - 9.4e-39 132.3 0.8 1.1e-38 132.1 0.8 1.0 1 0 0 1 1 1 1 Transposase IS200 like Cactin_mid PF10312.9 gi|21229139|ref|NP_635061.1| - 0.033 13.9 0.0 2.8 7.6 0.0 2.2 2 0 0 2 2 2 0 Conserved mid region of cactin OrfB_Zn_ribbon PF07282.11 gi|21229140|ref|NP_635062.1| - 9.6e-24 83.1 0.4 1.9e-23 82.2 0.4 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|21229140|ref|NP_635062.1| - 1.9e-22 79.8 0.0 4.2e-22 78.6 0.0 1.6 1 0 0 1 1 1 1 Probable transposase HTH_OrfB_IS605 PF12323.8 gi|21229140|ref|NP_635062.1| - 9.5e-15 53.8 1.6 1.9e-14 52.9 1.6 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-C3HC4_3 PF13920.6 gi|21229140|ref|NP_635062.1| - 0.02 14.7 1.3 0.035 14.0 1.3 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_SprT PF17283.2 gi|21229140|ref|NP_635062.1| - 0.029 14.3 0.3 0.06 13.3 0.3 1.5 1 0 0 1 1 1 0 SprT-like zinc ribbon domain DZR PF12773.7 gi|21229140|ref|NP_635062.1| - 0.034 14.2 1.1 0.067 13.2 1.1 1.4 1 0 0 1 1 1 0 Double zinc ribbon Rad50_zn_hook PF04423.14 gi|21229140|ref|NP_635062.1| - 0.46 10.4 2.3 0.7 9.8 0.0 2.4 3 0 0 3 3 3 0 Rad50 zinc hook motif DUF1451 PF07295.11 gi|21229140|ref|NP_635062.1| - 2.6 8.1 4.7 9.6 6.2 4.7 2.1 1 1 0 1 1 1 0 Zinc-ribbon containing domain HEPN_Apea PF18739.1 gi|21229141|ref|NP_635063.1| - 1e-14 54.8 0.1 2.4e-14 53.6 0.1 1.5 1 0 0 1 1 1 1 Apea-like HEPN AAA_16 PF13191.6 gi|21229143|ref|NP_635065.1| - 0.00028 21.3 0.0 0.0023 18.3 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain DUF815 PF05673.13 gi|21229143|ref|NP_635065.1| - 0.0011 18.2 0.0 0.0023 17.2 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) ATPase_2 PF01637.18 gi|21229143|ref|NP_635065.1| - 0.0029 17.6 0.0 0.011 15.7 0.0 2.0 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_29 PF13555.6 gi|21229143|ref|NP_635065.1| - 0.044 13.5 0.0 0.47 10.2 0.0 2.3 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|21229143|ref|NP_635065.1| - 0.057 13.7 0.1 1.6 9.0 0.0 3.2 3 0 0 3 3 3 0 AAA domain AAA_23 PF13476.6 gi|21229143|ref|NP_635065.1| - 6 7.3 8.1 15 6.0 0.1 3.3 3 0 0 3 3 3 0 AAA domain FrhB_FdhB_C PF04432.13 gi|21229144|ref|NP_635066.1| - 5.7e-42 143.2 0.1 8.1e-42 142.7 0.1 1.2 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|21229144|ref|NP_635066.1| - 1.4e-30 105.2 0.0 2.5e-30 104.4 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Oxidored_q6 PF01058.22 gi|21229145|ref|NP_635067.1| - 4.2e-28 97.8 0.2 4.2e-28 97.8 0.2 2.1 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.27 gi|21229145|ref|NP_635067.1| - 8.3e-13 47.6 16.1 5.2e-08 32.4 3.5 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21229145|ref|NP_635067.1| - 2e-07 31.9 8.8 0.002 19.0 1.8 3.3 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|21229145|ref|NP_635067.1| - 6.4e-07 29.9 15.7 2.2e-06 28.2 12.2 3.0 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21229145|ref|NP_635067.1| - 6.6e-07 29.4 11.0 0.012 15.7 0.4 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21229145|ref|NP_635067.1| - 1e-06 28.5 18.3 0.00026 21.0 3.1 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21229145|ref|NP_635067.1| - 1.2e-06 28.6 22.2 1.2e-05 25.3 12.8 3.5 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229145|ref|NP_635067.1| - 1.2e-06 28.6 24.3 2e-06 27.9 11.4 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21229145|ref|NP_635067.1| - 1.5e-06 28.0 17.0 0.0014 18.6 3.0 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21229145|ref|NP_635067.1| - 3.1e-05 24.1 18.0 0.0066 16.9 1.8 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|21229145|ref|NP_635067.1| - 0.0014 19.1 13.9 0.023 15.2 1.3 3.2 3 0 0 3 3 3 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|21229145|ref|NP_635067.1| - 0.0015 19.2 8.6 0.44 11.3 0.5 3.5 3 0 0 3 3 3 2 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|21229145|ref|NP_635067.1| - 0.0015 18.9 14.3 0.69 10.4 2.4 3.2 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21229145|ref|NP_635067.1| - 0.025 15.1 17.2 0.4 11.3 2.4 3.2 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21229145|ref|NP_635067.1| - 0.078 13.8 16.0 2.3 9.1 5.1 3.7 4 0 0 4 4 4 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21229145|ref|NP_635067.1| - 0.25 11.6 6.5 0.9 9.8 6.5 1.9 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21229145|ref|NP_635067.1| - 1.5 10.0 25.9 0.43 11.6 8.2 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain HycI PF01750.18 gi|21229146|ref|NP_635068.1| - 3.4e-33 114.2 0.0 4.3e-33 113.9 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease NiFeSe_Hases PF00374.19 gi|21229147|ref|NP_635069.1| - 3.4e-32 112.0 11.9 3.8e-15 55.8 0.4 4.5 2 1 1 3 3 3 3 Nickel-dependent hydrogenase Complex1_49kDa PF00346.19 gi|21229147|ref|NP_635069.1| - 0.015 14.4 0.0 0.029 13.5 0.0 1.5 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DDE_Tnp_1 PF01609.21 gi|21229149|ref|NP_635071.1| - 2.8e-12 46.8 0.9 4.3e-12 46.1 0.9 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.9 gi|21229149|ref|NP_635071.1| - 0.0037 17.3 0.2 0.013 15.5 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) DDE_Tnp_1_4 PF13701.6 gi|21229149|ref|NP_635071.1| - 0.022 13.0 1.2 0.06 11.6 1.2 1.6 1 1 0 1 1 1 0 Transposase DDE domain group 1 Glyco_hydro_16 PF00722.21 gi|21229150|ref|NP_635072.1| - 1.5e-05 24.6 2.5 1.8e-05 24.3 2.5 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 DUF2310 PF10071.9 gi|21229150|ref|NP_635072.1| - 3.1e-05 23.4 0.2 0.0019 17.5 0.3 2.1 2 0 0 2 2 2 2 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) Ribosomal_L28 PF00830.19 gi|21229150|ref|NP_635072.1| - 0.011 16.0 0.2 0.023 14.9 0.2 1.5 1 0 0 1 1 1 0 Ribosomal L28 family CAP_assoc_N PF14504.6 gi|21229150|ref|NP_635072.1| - 0.038 13.7 1.1 0.055 13.2 1.1 1.2 1 0 0 1 1 1 0 CAP-associated N-terminal DUF2187 PF09953.9 gi|21229150|ref|NP_635072.1| - 0.15 12.1 0.0 0.52 10.3 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2187) Glyco_transf_4 PF13439.6 gi|21229151|ref|NP_635073.1| - 0.073 13.1 0.0 0.094 12.7 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|21229151|ref|NP_635073.1| - 0.09 13.2 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|21229152|ref|NP_635074.1| - 1.6e-20 73.4 0.0 2.3e-20 72.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|21229152|ref|NP_635074.1| - 6.5e-19 68.7 0.0 9.1e-19 68.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|21229152|ref|NP_635074.1| - 3.7e-08 33.6 0.0 6.5e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|21229152|ref|NP_635074.1| - 0.09 12.8 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Pec_lyase PF09492.10 gi|21229153|ref|NP_635075.1| - 0.001 18.5 0.1 0.19 11.1 0.0 2.8 1 1 2 3 3 3 2 Pectic acid lyase Glyco_hydro_88 PF07470.13 gi|21229153|ref|NP_635075.1| - 0.033 13.3 0.0 0.055 12.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 Phage_portal PF04860.12 gi|21229153|ref|NP_635075.1| - 0.036 13.2 0.0 0.058 12.6 0.0 1.2 1 0 0 1 1 1 0 Phage portal protein GFO_IDH_MocA PF01408.22 gi|21229154|ref|NP_635076.1| - 9.8e-22 78.0 0.1 4.1e-21 76.0 0.0 2.1 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold ADH_zinc_N PF00107.26 gi|21229154|ref|NP_635076.1| - 1e-16 61.1 0.0 1.1e-15 57.8 0.0 2.5 3 0 0 3 3 3 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|21229154|ref|NP_635076.1| - 7.2e-06 25.7 0.0 1.9e-05 24.4 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFO_IDH_MocA_C PF02894.17 gi|21229154|ref|NP_635076.1| - 0.00012 22.1 0.0 0.00025 21.0 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain TrkA_N PF02254.18 gi|21229154|ref|NP_635076.1| - 0.0045 17.2 0.0 0.012 15.8 0.0 1.8 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_3 PF03447.16 gi|21229154|ref|NP_635076.1| - 0.0081 16.8 0.2 0.032 14.9 0.0 2.0 3 0 0 3 3 2 1 Homoserine dehydrogenase, NAD binding domain Glu_dehyd_C PF16912.5 gi|21229154|ref|NP_635076.1| - 0.0099 15.4 0.1 0.12 11.8 0.0 2.3 2 0 0 2 2 2 1 Glucose dehydrogenase C-terminus 2-Hacid_dh_C PF02826.19 gi|21229154|ref|NP_635076.1| - 0.013 14.8 0.1 0.027 13.8 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|21229154|ref|NP_635076.1| - 0.019 14.8 0.3 0.87 9.4 0.0 3.1 3 1 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|21229154|ref|NP_635076.1| - 0.029 13.7 0.1 0.029 13.7 0.1 1.8 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Sld5 PF05916.11 gi|21229154|ref|NP_635076.1| - 0.04 14.4 0.0 0.24 11.9 0.0 2.1 2 0 0 2 2 2 0 GINS complex protein YbgS PF13985.6 gi|21229154|ref|NP_635076.1| - 0.072 13.4 0.0 0.16 12.3 0.0 1.5 1 0 0 1 1 1 0 YbgS-like protein AMP-binding PF00501.28 gi|21229155|ref|NP_635077.1| - 0.0072 15.0 0.0 0.011 14.4 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme CAP18_C PF12153.8 gi|21229155|ref|NP_635077.1| - 0.056 13.3 0.0 0.14 12.0 0.0 1.7 1 0 0 1 1 1 0 LPS binding domain of CAP18 (C terminal) CP12 PF02672.15 gi|21229155|ref|NP_635077.1| - 0.1 13.3 0.0 0.24 12.2 0.0 1.6 1 0 0 1 1 1 0 CP12 domain PGA_cap PF09587.10 gi|21229156|ref|NP_635078.1| - 1.1e-29 103.6 0.0 1.4e-29 103.4 0.0 1.0 1 0 0 1 1 1 1 Bacterial capsule synthesis protein PGA_cap Pyrid_oxidase_2 PF13883.6 gi|21229156|ref|NP_635078.1| - 0.19 11.7 0.0 0.23 11.4 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase LTD PF00932.19 gi|21229158|ref|NP_635080.1| - 3.5e-20 72.4 1.0 1.4e-19 70.5 1.0 2.1 1 0 0 1 1 1 1 Lamin Tail Domain Lactamase_B PF00753.27 gi|21229158|ref|NP_635080.1| - 9.7e-18 64.9 3.0 1.1e-17 64.6 0.4 2.2 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|21229158|ref|NP_635080.1| - 1.1e-05 25.1 0.0 6.2e-05 22.6 0.0 2.1 2 1 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|21229158|ref|NP_635080.1| - 0.0013 18.2 0.0 0.0024 17.3 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|21229158|ref|NP_635080.1| - 0.05 13.5 0.0 0.1 12.5 0.0 1.6 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF3006 PF11213.8 gi|21229159|ref|NP_635081.1| - 3.8e-18 65.5 2.3 4.3e-18 65.3 2.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3006) CHS5_N PF16892.5 gi|21229159|ref|NP_635081.1| - 0.00092 19.1 0.0 0.0011 18.8 0.0 1.2 1 0 0 1 1 1 1 Chitin biosynthesis protein CHS5 N-terminus FMN_red PF03358.15 gi|21229160|ref|NP_635082.1| - 1.4e-28 99.6 0.0 2.1e-28 99.1 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21229160|ref|NP_635082.1| - 1.3e-13 51.1 0.0 2e-13 50.5 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin-like fold eIF3g PF12353.8 gi|21229160|ref|NP_635082.1| - 0.063 13.7 1.9 6 7.3 0.1 2.3 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 3 subunit G DUF169 PF02596.15 gi|21229161|ref|NP_635083.1| - 1.9e-38 132.5 0.3 2.4e-38 132.1 0.3 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 CarboxypepD_reg PF13620.6 gi|21229162|ref|NP_635084.1| - 0.0023 18.1 0.0 0.0036 17.5 0.0 1.3 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain TTR-52 PF01060.23 gi|21229162|ref|NP_635084.1| - 0.0089 16.7 0.0 0.018 15.7 0.0 1.6 1 0 0 1 1 1 1 Transthyretin-like family Peptidase_M15_3 PF08291.11 gi|21229164|ref|NP_635086.1| - 2e-23 82.6 0.0 3.2e-23 81.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase M15 Peptidase_M15_2 PF05951.13 gi|21229164|ref|NP_635086.1| - 0.044 13.4 0.0 0.072 12.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF882) Peptidase_S8 PF00082.22 gi|21229165|ref|NP_635087.1| - 4.6e-33 114.8 1.4 6.8e-33 114.2 1.4 1.2 1 0 0 1 1 1 1 Subtilase family FBPase_2 PF06874.11 gi|21229165|ref|NP_635087.1| - 0.018 13.3 0.6 2.8 6.1 0.1 2.1 2 0 0 2 2 2 0 Firmicute fructose-1,6-bisphosphatase GPW_gp25 PF04965.14 gi|21229165|ref|NP_635087.1| - 0.036 13.8 0.1 10 6.0 0.1 2.6 1 1 1 2 2 2 0 Gene 25-like lysozyme Fumerase PF05681.14 gi|21229168|ref|NP_635090.1| - 7.6e-99 330.5 0.1 8.6e-99 330.3 0.1 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) DBI_PRT PF02277.17 gi|21229168|ref|NP_635090.1| - 0.034 13.4 0.1 0.062 12.5 0.1 1.4 1 0 0 1 1 1 0 Phosphoribosyltransferase Fumerase_C PF05683.12 gi|21229169|ref|NP_635091.1| - 7.8e-46 156.0 0.0 8.6e-46 155.9 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus DUF1724 PF08350.10 gi|21229170|ref|NP_635092.1| - 6.2e-11 42.3 0.0 1.5e-10 41.0 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|21229170|ref|NP_635092.1| - 4.5e-06 26.4 0.0 7.9e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21229170|ref|NP_635092.1| - 0.00052 20.0 0.0 0.001 19.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|21229170|ref|NP_635092.1| - 0.0052 16.7 0.0 0.012 15.6 0.0 1.6 1 0 0 1 1 1 1 HTH domain Scm3 PF10384.9 gi|21229170|ref|NP_635092.1| - 0.035 13.8 0.0 0.078 12.7 0.0 1.5 1 0 0 1 1 1 0 Centromere protein Scm3 Rrf2 PF02082.20 gi|21229170|ref|NP_635092.1| - 0.061 13.7 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator MarR_2 PF12802.7 gi|21229170|ref|NP_635092.1| - 0.074 13.0 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 MarR family E1-E2_ATPase PF00122.20 gi|21229171|ref|NP_635093.1| - 2.1e-50 170.8 3.8 2.1e-50 170.8 3.8 3.4 4 0 0 4 4 4 2 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|21229171|ref|NP_635093.1| - 5.6e-32 110.9 4.9 5.6e-32 110.9 4.9 2.6 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|21229171|ref|NP_635093.1| - 1.8e-20 74.1 6.6 8.7e-19 68.6 6.6 2.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|21229171|ref|NP_635093.1| - 3.8e-20 71.3 0.0 9.2e-20 70.1 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 gi|21229171|ref|NP_635093.1| - 1.3e-17 63.6 0.0 2.9e-17 62.5 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|21229171|ref|NP_635093.1| - 1.5e-05 24.8 2.4 0.0019 18.0 1.3 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|21229171|ref|NP_635093.1| - 0.0032 17.9 0.1 0.011 16.2 0.1 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase TMEM125 PF15109.6 gi|21229171|ref|NP_635093.1| - 0.043 14.2 0.2 0.13 12.6 0.2 1.8 1 0 0 1 1 1 0 TMEM125 protein family PPK2 PF03976.14 gi|21229172|ref|NP_635094.1| - 6.2e-66 222.2 3.1 1.1e-65 221.4 3.1 1.3 1 0 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) MFS_1 PF07690.16 gi|21229173|ref|NP_635095.1| - 3.5e-10 39.4 16.4 8.7e-10 38.0 14.7 2.0 2 0 0 2 2 2 1 Major Facilitator Superfamily Bac_export_3 PF01313.19 gi|21229173|ref|NP_635095.1| - 0.31 11.0 0.2 0.31 11.0 0.2 3.6 4 0 0 4 4 4 0 Bacterial export proteins, family 3 PsbW PF07123.12 gi|21229173|ref|NP_635095.1| - 1.2 9.2 5.5 6.2 6.8 0.2 3.0 3 0 0 3 3 3 0 Photosystem II reaction centre W protein (PsbW) DUF3021 PF11457.8 gi|21229173|ref|NP_635095.1| - 3.2 8.1 11.5 3.3 8.0 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3021) DUF2306 PF10067.9 gi|21229173|ref|NP_635095.1| - 4.5 7.5 8.7 1.8 8.8 5.0 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2306) DUF4407 PF14362.6 gi|21229173|ref|NP_635095.1| - 8.1 5.7 6.4 60 2.9 4.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) DUF308 PF03729.13 gi|21229174|ref|NP_635096.1| - 4.8e-21 74.9 53.6 1e-10 41.8 20.8 3.1 3 0 0 3 3 3 3 Short repeat of unknown function (DUF308) NosD PF05048.13 gi|21229175|ref|NP_635097.1| - 2.9e-83 278.9 107.3 9.8e-36 123.2 31.8 4.2 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Lectin_like PF18560.1 gi|21229175|ref|NP_635097.1| - 1.1e-58 197.8 0.3 3.2e-58 196.3 0.3 1.9 1 0 0 1 1 1 1 Lectin like domain Beta_helix PF13229.6 gi|21229175|ref|NP_635097.1| - 2e-49 167.5 106.4 3.6e-18 65.9 26.0 4.7 2 1 2 4 4 4 4 Right handed beta helix region Peptidase_C1 PF00112.23 gi|21229175|ref|NP_635097.1| - 4.1e-20 72.8 0.0 8.2e-20 71.8 0.0 1.4 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.20 gi|21229175|ref|NP_635097.1| - 1.5e-11 44.0 0.4 5.7e-11 42.1 0.4 2.0 1 0 0 1 1 1 1 PKD domain TRP_2 PF08344.11 gi|21229175|ref|NP_635097.1| - 0.039 14.2 0.4 0.31 11.3 0.0 2.3 2 0 0 2 2 2 0 Transient receptor ion channel II Ribo_biogen_C PF04034.13 gi|21229176|ref|NP_635098.1| - 4.3e-47 159.0 0.0 5.2e-47 158.7 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|21229176|ref|NP_635098.1| - 6.7e-15 54.6 0.2 6.7e-15 54.6 0.2 1.8 2 0 0 2 2 2 1 Possible Fer4-like domain in RNase L inhibitor, RLI RNA_Me_trans PF04252.13 gi|21229176|ref|NP_635098.1| - 0.024 14.2 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 Predicted SAM-dependent RNA methyltransferase DTW PF03942.15 gi|21229176|ref|NP_635098.1| - 0.098 12.3 0.0 0.18 11.5 0.0 1.4 1 1 0 1 1 1 0 DTW domain ANF_receptor PF01094.28 gi|21229176|ref|NP_635098.1| - 0.17 10.9 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region LDcluster4 PF18306.1 gi|21229177|ref|NP_635099.1| - 1.7e-46 157.7 3.5 2e-46 157.4 3.5 1.0 1 0 0 1 1 1 1 SLOG cluster4 family DNA_processg_A PF02481.15 gi|21229177|ref|NP_635099.1| - 5.8e-09 35.5 0.3 2.5e-06 26.9 0.2 2.0 2 0 0 2 2 2 2 DNA recombination-mediator protein A Lysine_decarbox PF03641.14 gi|21229177|ref|NP_635099.1| - 1.1e-06 28.8 0.7 2.4e-06 27.7 0.0 1.8 2 0 0 2 2 2 1 Possible lysine decarboxylase Topoisom_bac PF01131.20 gi|21229178|ref|NP_635100.1| - 1.6e-122 409.5 0.0 2.2e-122 409.0 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|21229178|ref|NP_635100.1| - 5.4e-15 55.5 1.4 9e-15 54.8 0.2 2.1 2 0 0 2 2 2 1 Toprim domain zf-C4_Topoisom PF01396.19 gi|21229178|ref|NP_635100.1| - 1e-13 50.8 4.9 1.1e-13 50.7 1.2 2.4 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger HHH_5 PF14520.6 gi|21229178|ref|NP_635100.1| - 3.5e-07 30.7 0.4 2.1e-06 28.2 0.5 2.3 2 0 0 2 2 1 1 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|21229178|ref|NP_635100.1| - 0.00023 21.3 0.0 0.00055 20.1 0.0 1.7 1 0 0 1 1 1 1 Pathogenicity locus DUF4332 PF14229.6 gi|21229178|ref|NP_635100.1| - 0.0003 21.0 0.0 0.00068 19.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) HEXIM PF15313.6 gi|21229178|ref|NP_635100.1| - 0.0037 17.5 0.2 4 7.6 0.0 2.5 2 0 0 2 2 2 2 Hexamethylene bis-acetamide-inducible protein Cas_TM1802 PF09484.10 gi|21229178|ref|NP_635100.1| - 0.018 13.8 0.1 0.032 13.0 0.1 1.3 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) DNA_pol_lambd_f PF10391.9 gi|21229178|ref|NP_635100.1| - 0.035 14.0 0.0 0.096 12.5 0.0 1.8 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda TfoX_C PF04994.13 gi|21229178|ref|NP_635100.1| - 0.041 14.0 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 TfoX C-terminal domain DUF2283 PF10049.9 gi|21229178|ref|NP_635100.1| - 0.088 13.0 0.4 0.31 11.3 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2283) BAF PF02961.14 gi|21229178|ref|NP_635100.1| - 0.14 12.6 0.4 0.98 9.9 0.2 2.2 2 0 0 2 2 2 0 Barrier to autointegration factor Usp PF00582.26 gi|21229179|ref|NP_635101.1| - 3.1e-38 131.5 0.4 3.4e-38 131.3 0.4 1.0 1 0 0 1 1 1 1 Universal stress protein family B12-binding PF02310.19 gi|21229179|ref|NP_635101.1| - 0.038 14.0 0.0 0.062 13.3 0.0 1.5 1 1 0 1 1 1 0 B12 binding domain Dynamin_N PF00350.23 gi|21229179|ref|NP_635101.1| - 0.06 13.4 0.1 0.078 13.0 0.1 1.3 1 0 0 1 1 1 0 Dynamin family Asparaginase_C PF17763.1 gi|21229179|ref|NP_635101.1| - 0.078 13.2 0.6 10 6.3 0.1 2.1 2 0 0 2 2 2 0 Glutaminase/Asparaginase C-terminal domain Nitro_FeMo-Co PF02579.17 gi|21229179|ref|NP_635101.1| - 0.14 12.5 0.5 3.2 8.1 0.0 2.5 2 1 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor Beta-Casp PF10996.8 gi|21229180|ref|NP_635102.1| - 6.9e-14 52.1 0.0 1.7e-13 50.8 0.0 1.7 2 0 0 2 2 2 1 Beta-Casp domain RMMBL PF07521.12 gi|21229180|ref|NP_635102.1| - 2.3e-12 46.7 0.1 4.4e-11 42.6 0.0 2.3 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|21229180|ref|NP_635102.1| - 1.2e-07 31.5 0.0 2.2e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|21229180|ref|NP_635102.1| - 4.3e-07 30.2 0.0 7.9e-05 22.8 0.0 2.3 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|21229180|ref|NP_635102.1| - 2.6e-05 23.7 0.0 5.3e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|21229180|ref|NP_635102.1| - 0.0015 18.4 0.0 0.0049 16.8 0.0 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DUF460 PF04312.13 gi|21229182|ref|NP_635104.1| - 2.6e-45 153.6 0.1 7.6e-45 152.1 0.1 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF460) DUF677 PF05055.12 gi|21229182|ref|NP_635104.1| - 0.0079 15.1 7.1 0.014 14.3 7.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF677) acVLRF1 PF18859.1 gi|21229182|ref|NP_635104.1| - 0.012 15.9 0.2 0.012 15.9 0.2 2.7 3 0 0 3 3 3 0 Actinobacteria/chloroflexi VLRF1 release factor Atg14 PF10186.9 gi|21229182|ref|NP_635104.1| - 0.013 14.6 13.4 0.026 13.6 13.4 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 gi|21229182|ref|NP_635104.1| - 0.013 15.6 2.2 0.013 15.6 2.2 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 gi|21229182|ref|NP_635104.1| - 0.034 13.7 5.9 0.064 12.8 5.9 1.5 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF2703 PF10865.8 gi|21229182|ref|NP_635104.1| - 0.067 13.4 0.5 0.15 12.3 0.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) SlyX PF04102.12 gi|21229182|ref|NP_635104.1| - 0.068 13.8 8.4 4.5 8.0 3.7 3.1 1 1 1 2 2 2 0 SlyX Herpes_UL6 PF01763.16 gi|21229182|ref|NP_635104.1| - 0.15 10.5 6.7 0.22 10.0 6.7 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like FAM76 PF16046.5 gi|21229182|ref|NP_635104.1| - 0.28 10.5 12.4 0.48 9.7 12.4 1.4 1 0 0 1 1 1 0 FAM76 protein TMPIT PF07851.13 gi|21229182|ref|NP_635104.1| - 0.3 10.3 9.7 0.47 9.7 9.7 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF16 PF01519.16 gi|21229182|ref|NP_635104.1| - 0.31 11.5 15.3 0.15 12.6 5.0 2.7 1 1 1 2 2 2 0 Protein of unknown function DUF16 VPS38 PF17649.1 gi|21229182|ref|NP_635104.1| - 0.45 9.3 7.8 0.8 8.5 7.8 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting 38 L31 PF09784.9 gi|21229182|ref|NP_635104.1| - 0.96 9.9 9.5 13 6.3 1.8 3.0 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L31 XLF PF09302.11 gi|21229182|ref|NP_635104.1| - 1.1 9.4 6.8 0.25 11.5 0.9 2.3 1 1 1 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component BLOC1_2 PF10046.9 gi|21229182|ref|NP_635104.1| - 1.6 9.1 10.8 0.54 10.6 2.5 2.7 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 gi|21229182|ref|NP_635104.1| - 3.4 7.7 7.4 1 9.4 1.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) KASH_CCD PF14662.6 gi|21229182|ref|NP_635104.1| - 3.8 7.3 17.6 0.93 9.3 11.7 2.2 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Spc29 PF17082.5 gi|21229182|ref|NP_635104.1| - 4.1 7.2 12.8 12 5.7 3.6 2.3 1 1 1 2 2 2 0 Spindle Pole Component 29 CREPT PF16566.5 gi|21229182|ref|NP_635104.1| - 4.2 7.5 17.2 12 6.1 0.0 3.1 3 1 0 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour P4Ha_N PF08336.11 gi|21229182|ref|NP_635104.1| - 7.1 6.6 9.6 1.3 9.1 2.0 2.7 1 1 1 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region DUF641 PF04859.12 gi|21229182|ref|NP_635104.1| - 8.4 6.7 18.7 0.92 9.9 4.9 2.9 2 1 1 3 3 2 0 Plant protein of unknown function (DUF641) RIO1 PF01163.22 gi|21229183|ref|NP_635105.1| - 4.9e-44 150.2 0.1 4.9e-44 150.2 0.1 1.4 2 0 0 2 2 2 1 RIO1 family Rio2_N PF09202.11 gi|21229183|ref|NP_635105.1| - 1.1e-28 99.2 0.0 2.6e-28 98.0 0.0 1.6 1 0 0 1 1 1 1 Rio2, N-terminal Pkinase PF00069.25 gi|21229183|ref|NP_635105.1| - 0.00012 21.5 0.2 0.00044 19.7 0.0 2.0 2 1 0 2 2 2 1 Protein kinase domain APH PF01636.23 gi|21229183|ref|NP_635105.1| - 0.00073 19.5 0.1 0.019 14.9 0.0 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family HTH_27 PF13463.6 gi|21229183|ref|NP_635105.1| - 0.1 13.1 0.0 0.91 10.1 0.0 2.5 3 0 0 3 3 3 0 Winged helix DNA-binding domain Fzo_mitofusin PF04799.13 gi|21229183|ref|NP_635105.1| - 0.22 11.1 1.2 0.35 10.4 1.2 1.2 1 0 0 1 1 1 0 fzo-like conserved region zf-C2H2_aberr PF17017.5 gi|21229183|ref|NP_635105.1| - 0.43 10.7 5.1 0.8 9.8 3.3 2.0 2 0 0 2 2 2 0 Aberrant zinc-finger AAA_11 PF13086.6 gi|21229183|ref|NP_635105.1| - 0.67 9.7 3.2 18 5.0 3.2 2.1 2 0 0 2 2 2 0 AAA domain LRR_5 PF13306.6 gi|21229184|ref|NP_635106.1| - 0.0051 16.8 0.1 0.011 15.7 0.1 1.5 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) LRR_4 PF12799.7 gi|21229184|ref|NP_635106.1| - 0.2 12.2 14.8 2.8 8.5 0.0 4.9 3 2 1 5 5 5 0 Leucine Rich repeats (2 copies) DJ-1_PfpI PF01965.24 gi|21229186|ref|NP_635108.1| - 7.3e-48 162.5 0.0 8e-48 162.3 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|21229186|ref|NP_635108.1| - 2.2e-05 24.3 0.0 2.4e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|21229186|ref|NP_635108.1| - 0.0086 15.9 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 gi|21229186|ref|NP_635108.1| - 0.027 14.1 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ThiJ_like PF17124.5 gi|21229186|ref|NP_635108.1| - 0.049 13.3 0.0 0.11 12.2 0.0 1.5 1 1 0 1 1 1 0 ThiJ/PfpI family-like GATase_5 PF13507.6 gi|21229186|ref|NP_635108.1| - 0.073 12.2 0.0 0.11 11.5 0.0 1.5 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Cys_Met_Meta_PP PF01053.20 gi|21229187|ref|NP_635109.1| - 1.6e-150 500.9 0.0 1.8e-150 500.8 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|21229187|ref|NP_635109.1| - 4.5e-08 32.7 0.1 6.5e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Met_gamma_lyase PF06838.11 gi|21229187|ref|NP_635109.1| - 9e-06 24.4 0.1 0.00011 20.8 0.1 2.0 1 1 0 1 1 1 1 Methionine gamma-lyase Aminotran_5 PF00266.19 gi|21229187|ref|NP_635109.1| - 1.4e-05 24.2 0.0 2.2e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V NAPRTase PF04095.16 gi|21229188|ref|NP_635110.1| - 2.9e-61 207.2 0.0 4.2e-61 206.6 0.0 1.2 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family NAPRTase_N PF17767.1 gi|21229188|ref|NP_635110.1| - 1.4e-35 122.4 0.2 2.1e-35 121.8 0.2 1.3 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HisKA_3 PF07730.13 gi|21229188|ref|NP_635110.1| - 0.15 12.6 0.0 4.7 7.8 0.0 2.3 2 0 0 2 2 2 0 Histidine kinase PD40 PF07676.12 gi|21229189|ref|NP_635111.1| - 4.6e-20 71.0 16.2 1.6e-12 47.0 0.9 4.8 5 0 0 5 5 5 3 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 gi|21229189|ref|NP_635111.1| - 9e-06 24.7 1.7 0.0013 17.6 0.4 3.8 1 1 3 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF5050 PF16472.5 gi|21229189|ref|NP_635111.1| - 0.00054 19.3 0.3 0.66 9.2 0.0 2.6 1 1 0 2 2 2 2 Domain of unknown function (DUF5050) Pectate_lyase22 PF14583.6 gi|21229189|ref|NP_635111.1| - 0.021 13.5 0.4 4.8 5.8 0.0 3.1 3 1 1 4 4 4 0 Oligogalacturonate lyase Hexapep PF00132.24 gi|21229190|ref|NP_635112.1| - 1.2e-11 43.8 1.1 0.011 15.4 0.0 4.6 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21229190|ref|NP_635112.1| - 2e-05 24.2 5.9 0.019 14.7 0.4 4.5 4 1 1 5 5 5 3 Hexapeptide repeat of succinyl-transferase Adhesin_P1_N PF18652.1 gi|21229190|ref|NP_635112.1| - 0.003 17.5 0.2 0.007 16.4 0.2 1.6 1 0 0 1 1 1 1 Adhesin P1 N-terminal domain FtsX PF02687.21 gi|21229191|ref|NP_635113.1| - 1.2 9.7 9.1 0.64 10.5 0.4 3.2 2 1 1 3 3 3 0 FtsX-like permease family HEAT_2 PF13646.6 gi|21229192|ref|NP_635114.1| - 1.3e-82 272.3 17.6 8.4e-18 64.5 1.7 6.7 1 1 5 7 7 7 7 HEAT repeats HEAT PF02985.22 gi|21229192|ref|NP_635114.1| - 2e-49 161.3 3.2 0.00043 20.3 0.0 12.9 13 0 0 13 13 13 9 HEAT repeat HEAT_PBS PF03130.16 gi|21229192|ref|NP_635114.1| - 1.2e-44 146.4 20.7 0.0047 17.5 0.1 14.1 14 0 0 14 14 14 11 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 gi|21229192|ref|NP_635114.1| - 4.7e-36 122.8 16.8 0.0012 19.2 0.0 12.4 11 2 2 13 13 13 8 HEAT-like repeat Arm PF00514.23 gi|21229192|ref|NP_635114.1| - 2e-19 68.9 1.2 0.15 12.2 0.0 9.7 8 2 2 10 10 10 4 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|21229192|ref|NP_635114.1| - 9.2e-17 61.6 0.9 0.11 12.5 0.0 8.3 4 3 2 7 7 7 3 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|21229192|ref|NP_635114.1| - 1.5e-10 40.3 0.6 2.6e-06 26.3 0.1 5.6 1 1 3 4 4 4 2 Adaptin N terminal region RasGEF_N_2 PF14663.6 gi|21229192|ref|NP_635114.1| - 2.6e-06 27.8 0.1 7.4 7.0 0.0 5.8 5 1 1 6 6 6 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Vac14_Fab1_bd PF12755.7 gi|21229192|ref|NP_635114.1| - 5.6e-06 26.9 0.0 9.7 6.9 0.0 6.8 4 1 1 6 6 6 0 Vacuolar 14 Fab1-binding region ERAP1_C PF11838.8 gi|21229192|ref|NP_635114.1| - 8.9e-06 25.5 0.0 0.52 9.8 0.2 3.5 1 1 2 3 3 3 2 ERAP1-like C-terminal domain RTP1_C1 PF10363.9 gi|21229192|ref|NP_635114.1| - 1.3e-05 25.4 0.0 4.1 7.6 0.0 4.5 4 1 0 4 4 4 2 Required for nuclear transport of RNA pol II C-terminus 1 Aconitase_B_N PF11791.8 gi|21229192|ref|NP_635114.1| - 0.00019 21.5 5.1 3.7 7.6 0.1 6.2 2 2 4 8 8 8 1 Aconitate B N-terminal domain CLASP_N PF12348.8 gi|21229192|ref|NP_635114.1| - 0.0002 21.0 0.2 10 5.6 0.0 5.3 5 1 1 6 6 6 0 CLASP N terminal IFRD PF05004.13 gi|21229192|ref|NP_635114.1| - 0.002 17.3 1.2 4.2 6.4 0.0 4.6 4 1 2 6 6 6 1 Interferon-related developmental regulator (IFRD) DUF1641 PF07849.11 gi|21229192|ref|NP_635114.1| - 0.0052 16.6 9.1 38 4.3 0.0 6.8 7 0 0 7 7 6 0 Protein of unknown function (DUF1641) Vitellogenin_N PF01347.22 gi|21229192|ref|NP_635114.1| - 0.0059 15.1 0.0 10 4.4 0.0 4.1 2 1 3 5 5 5 0 Lipoprotein amino terminal region RICTOR_M PF14666.6 gi|21229192|ref|NP_635114.1| - 0.0068 16.2 0.0 1.2e+02 2.5 0.0 5.1 5 0 0 5 5 5 0 Rapamycin-insensitive companion of mTOR, middle domain ALF PF03752.13 gi|21229192|ref|NP_635114.1| - 0.0071 16.3 6.1 4.5 7.3 0.1 6.5 8 0 0 8 8 8 1 Short repeats of unknown function TAF6_C PF07571.13 gi|21229192|ref|NP_635114.1| - 0.041 14.2 0.1 1.6 9.1 0.0 3.4 2 1 0 2 2 2 0 TAF6 C-terminal HEAT repeat domain DUF5397 PF17375.2 gi|21229192|ref|NP_635114.1| - 0.045 13.5 0.0 4.6 7.0 0.0 3.6 3 1 1 4 4 3 0 Family of unknown function (DUF5397) CHAD PF05235.14 gi|21229192|ref|NP_635114.1| - 0.061 13.3 0.7 0.7 9.8 0.1 2.6 1 1 0 2 2 2 0 CHAD domain Proteasom_PSMB PF10508.9 gi|21229192|ref|NP_635114.1| - 0.12 10.9 0.1 0.71 8.3 0.1 2.3 2 1 0 2 2 2 0 Proteasome non-ATPase 26S subunit Tti2 PF10521.9 gi|21229192|ref|NP_635114.1| - 0.16 11.5 0.1 25 4.3 0.0 3.9 4 1 1 5 5 5 0 Tti2 family Nop52 PF05997.12 gi|21229192|ref|NP_635114.1| - 0.47 10.2 1.4 39 3.9 0.0 3.5 3 1 0 3 3 3 0 Nucleolar protein,Nop52 Cohesin_HEAT PF12765.7 gi|21229192|ref|NP_635114.1| - 2.2 8.7 8.3 37 4.8 0.1 5.1 5 0 0 5 5 5 0 HEAT repeat associated with sister chromatid cohesion ABC_tran_CTD PF16326.5 gi|21229193|ref|NP_635115.1| - 0.0012 19.1 1.4 0.0012 19.1 1.4 2.7 3 0 0 3 3 3 1 ABC transporter C-terminal domain FlaC_arch PF05377.11 gi|21229193|ref|NP_635115.1| - 0.0061 16.9 1.5 0.0061 16.9 1.5 3.1 3 0 0 3 3 3 1 Flagella accessory protein C (FlaC) DUF2275 PF10039.9 gi|21229193|ref|NP_635115.1| - 0.019 15.1 0.1 0.032 14.4 0.1 1.3 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2275) Spc29 PF17082.5 gi|21229193|ref|NP_635115.1| - 0.033 14.0 2.2 0.037 13.9 0.5 1.7 2 0 0 2 2 2 0 Spindle Pole Component 29 zf-AD PF07776.15 gi|21229193|ref|NP_635115.1| - 0.044 14.0 0.3 0.51 10.6 0.0 2.6 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) DUF5082 PF16888.5 gi|21229193|ref|NP_635115.1| - 0.1 12.9 9.8 5.4 7.3 0.3 3.8 2 1 2 4 4 4 0 Domain of unknown function (DUF5082) TBCC_N PF16752.5 gi|21229193|ref|NP_635115.1| - 0.2 12.1 7.7 17 5.9 0.2 3.5 2 1 1 3 3 3 0 Tubulin-specific chaperone C N-terminal domain T4SS PF07996.11 gi|21229193|ref|NP_635115.1| - 0.28 11.5 4.2 7.1 7.0 0.1 2.4 2 0 0 2 2 2 0 Type IV secretion system proteins Bacillus_HBL PF05791.11 gi|21229193|ref|NP_635115.1| - 0.55 10.0 6.0 0.098 12.5 0.9 2.2 2 1 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Fib_alpha PF08702.10 gi|21229193|ref|NP_635115.1| - 1.1 9.5 11.3 3.3 7.9 0.6 3.1 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family DUF4085 PF13315.6 gi|21229193|ref|NP_635115.1| - 1.6 8.3 9.0 6 6.4 1.6 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4085) SPACA9 PF15120.6 gi|21229193|ref|NP_635115.1| - 1.9 8.3 5.5 1.5 8.6 1.1 2.6 2 1 0 2 2 2 0 Sperm acrosome-associated protein 9 DUF948 PF06103.11 gi|21229193|ref|NP_635115.1| - 2.2 8.6 11.3 30 5.0 0.3 3.6 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF948) Prominin PF05478.11 gi|21229193|ref|NP_635115.1| - 4.8 5.0 10.9 0.69 7.8 0.4 2.7 2 1 1 3 3 3 0 Prominin CAMP_factor PF07373.11 gi|21229193|ref|NP_635115.1| - 5.6 6.5 7.8 2.4 7.7 0.1 2.9 2 1 1 3 3 3 0 CAMP factor (Cfa) NPV_P10 PF05531.12 gi|21229193|ref|NP_635115.1| - 7.3 7.1 12.4 6.5 7.3 0.4 3.5 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DNA_repr_REX1B PF14966.6 gi|21229193|ref|NP_635115.1| - 9.6 7.0 7.7 12 6.6 0.2 2.8 2 1 1 3 3 3 0 DNA repair REX1-B HTH_20 PF12840.7 gi|21229194|ref|NP_635116.1| - 3.9e-11 42.8 0.0 5.6e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Methyltr_RsmF_N PF17125.5 gi|21229194|ref|NP_635116.1| - 0.00048 20.6 0.0 0.00067 20.1 0.0 1.3 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF HTH_24 PF13412.6 gi|21229194|ref|NP_635116.1| - 0.00078 18.9 2.1 0.0016 18.0 2.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|21229194|ref|NP_635116.1| - 0.002 18.0 0.2 0.0049 16.7 0.2 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 gi|21229194|ref|NP_635116.1| - 0.0021 17.8 0.0 0.077 12.8 0.0 2.5 2 0 0 2 2 2 1 Homeodomain-like domain HTH_5 PF01022.20 gi|21229194|ref|NP_635116.1| - 0.0034 17.2 0.4 0.0034 17.2 0.4 2.3 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family Dimerisation2 PF16864.5 gi|21229194|ref|NP_635116.1| - 0.0065 16.4 0.0 0.0095 15.9 0.0 1.3 1 0 0 1 1 1 1 Dimerisation domain HTH_38 PF13936.6 gi|21229194|ref|NP_635116.1| - 0.021 14.5 0.2 0.058 13.2 0.1 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain TFIIE_alpha PF02002.17 gi|21229194|ref|NP_635116.1| - 0.042 13.7 1.1 0.055 13.3 1.1 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit MarR_2 PF12802.7 gi|21229194|ref|NP_635116.1| - 0.042 13.7 0.1 0.067 13.1 0.1 1.3 1 0 0 1 1 1 0 MarR family HTH_7 PF02796.15 gi|21229194|ref|NP_635116.1| - 0.042 13.9 0.2 0.17 12.0 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase MarR PF01047.22 gi|21229194|ref|NP_635116.1| - 0.043 13.8 0.2 0.077 12.9 0.2 1.4 1 0 0 1 1 1 0 MarR family HTH_30 PF13556.6 gi|21229194|ref|NP_635116.1| - 0.11 12.4 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DUF742 PF05331.11 gi|21229194|ref|NP_635116.1| - 0.15 11.9 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF742) AIM24 PF01987.17 gi|21229195|ref|NP_635117.1| - 0.015 15.1 0.0 0.022 14.5 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial biogenesis AIM24 CarboxypepD_reg PF13620.6 gi|21229196|ref|NP_635118.1| - 0.00028 21.1 0.0 0.00057 20.1 0.0 1.5 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain HTH_24 PF13412.6 gi|21229196|ref|NP_635118.1| - 0.00071 19.1 0.5 0.0011 18.5 0.5 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|21229196|ref|NP_635118.1| - 0.00082 19.3 0.1 0.0016 18.3 0.1 1.4 1 0 0 1 1 1 1 MarR family CarbopepD_reg_2 PF13715.6 gi|21229196|ref|NP_635118.1| - 0.0036 17.3 0.0 0.0097 15.9 0.0 1.7 1 0 0 1 1 1 1 CarboxypepD_reg-like domain MarR_2 PF12802.7 gi|21229196|ref|NP_635118.1| - 0.006 16.4 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21229196|ref|NP_635118.1| - 0.013 16.0 0.1 0.031 14.8 0.1 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|21229196|ref|NP_635118.1| - 0.036 14.1 0.4 0.062 13.3 0.4 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain ABC_tran PF00005.27 gi|21229197|ref|NP_635119.1| - 8.2e-32 110.6 0.0 1.2e-31 110.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|21229197|ref|NP_635119.1| - 2.9e-07 30.2 0.0 1.3e-06 28.1 0.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|21229197|ref|NP_635119.1| - 1.1e-06 28.7 0.6 0.044 13.6 0.2 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|21229197|ref|NP_635119.1| - 2.1e-06 28.2 0.0 3.3e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|21229197|ref|NP_635119.1| - 0.00087 19.0 0.0 0.0015 18.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|21229197|ref|NP_635119.1| - 0.001 19.0 0.0 0.0021 18.0 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_14 PF13173.6 gi|21229197|ref|NP_635119.1| - 0.0019 18.2 0.0 0.0043 17.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|21229197|ref|NP_635119.1| - 0.0054 17.3 0.5 0.061 13.9 0.5 2.3 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|21229197|ref|NP_635119.1| - 0.0071 16.6 0.1 0.025 14.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain DUF2119 PF09892.9 gi|21229197|ref|NP_635119.1| - 0.016 14.6 0.1 0.7 9.2 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2119) IstB_IS21 PF01695.17 gi|21229197|ref|NP_635119.1| - 0.021 14.5 0.0 0.32 10.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein G-alpha PF00503.20 gi|21229197|ref|NP_635119.1| - 0.032 13.4 0.0 0.036 13.2 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_13 PF13166.6 gi|21229197|ref|NP_635119.1| - 0.037 12.7 0.1 0.91 8.1 0.0 2.1 1 1 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|21229197|ref|NP_635119.1| - 0.038 13.7 0.0 0.091 12.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|21229197|ref|NP_635119.1| - 0.04 14.4 0.2 0.12 12.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|21229197|ref|NP_635119.1| - 0.047 13.8 0.7 0.39 10.8 0.7 2.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_10 PF12846.7 gi|21229197|ref|NP_635119.1| - 0.053 12.4 0.0 0.091 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain ATPase_2 PF01637.18 gi|21229197|ref|NP_635119.1| - 0.053 13.4 0.2 0.16 11.9 0.2 2.1 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea T2SSE PF00437.20 gi|21229197|ref|NP_635119.1| - 0.055 12.5 0.0 0.09 11.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 gi|21229197|ref|NP_635119.1| - 0.091 13.2 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_33 PF13671.6 gi|21229197|ref|NP_635119.1| - 0.12 12.5 0.0 0.16 12.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain NPCBM_assoc PF10633.9 gi|21229198|ref|NP_635120.1| - 6e-09 36.0 0.6 0.00093 19.4 0.0 3.3 3 0 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|21229198|ref|NP_635120.1| - 4.5e-05 23.7 4.5 0.006 16.9 2.1 2.5 1 1 1 2 2 2 2 Domain of unknown function DUF11 CARDB PF07705.11 gi|21229198|ref|NP_635120.1| - 0.00094 19.4 4.9 0.0032 17.7 0.3 2.8 1 1 2 3 3 3 1 CARDB Guanylate_kin PF00625.21 gi|21229198|ref|NP_635120.1| - 0.0057 16.4 0.1 0.01 15.6 0.1 1.4 1 0 0 1 1 1 1 Guanylate kinase MG2 PF01835.19 gi|21229198|ref|NP_635120.1| - 0.0099 16.3 0.1 0.056 13.9 0.1 2.1 1 1 0 1 1 1 1 MG2 domain DUF1573 PF07610.11 gi|21229198|ref|NP_635120.1| - 0.022 14.8 1.8 5.1 7.2 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1573) P2_N PF18628.1 gi|21229198|ref|NP_635120.1| - 0.025 14.3 0.5 0.21 11.3 0.1 2.4 2 1 1 3 3 3 0 Viral coat protein P2 N-terminal domain A2M PF00207.22 gi|21229198|ref|NP_635120.1| - 0.026 14.4 0.1 0.12 12.2 0.0 2.1 2 0 0 2 2 2 0 Alpha-2-macroglobulin family Candida_ALS_N PF11766.8 gi|21229198|ref|NP_635120.1| - 0.035 13.4 0.2 0.32 10.2 0.1 2.1 2 0 0 2 2 2 0 Cell-wall agglutinin N-terminal ligand-sugar binding Cohesin PF00963.18 gi|21229198|ref|NP_635120.1| - 0.052 13.8 4.5 0.089 13.0 4.5 1.5 1 0 0 1 1 1 0 Cohesin domain OsmC PF02566.19 gi|21229198|ref|NP_635120.1| - 0.12 12.9 0.0 0.32 11.5 0.0 1.7 2 0 0 2 2 2 0 OsmC-like protein FixG_C PF11614.8 gi|21229198|ref|NP_635120.1| - 0.14 12.3 0.8 6.5 7.0 0.1 2.3 2 1 0 2 2 2 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF150_C PF17384.2 gi|21229198|ref|NP_635120.1| - 0.47 10.6 2.2 0.32 11.1 0.4 1.6 2 0 0 2 2 2 0 RimP C-terminal SH3 domain NPCBM_assoc PF10633.9 gi|21229199|ref|NP_635121.1| - 0.00015 21.9 0.2 0.1 12.8 0.1 2.5 2 0 0 2 2 2 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|21229199|ref|NP_635121.1| - 0.074 13.3 5.2 0.28 11.5 1.2 2.5 2 0 0 2 2 2 0 CARDB MacB_PCD PF12704.7 gi|21229200|ref|NP_635122.1| - 5.5e-31 108.4 3.6 5.5e-31 108.4 3.6 2.7 2 1 0 4 4 4 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|21229200|ref|NP_635122.1| - 8.5e-15 55.0 5.3 8.5e-15 55.0 5.3 3.2 3 0 0 3 3 3 1 FtsX-like permease family Yip1 PF04893.17 gi|21229200|ref|NP_635122.1| - 0.29 10.8 15.8 0.74 9.5 11.8 2.2 2 0 0 2 2 2 0 Yip1 domain DUF2207 PF09972.9 gi|21229200|ref|NP_635122.1| - 0.3 9.8 4.4 0.52 9.0 3.2 1.9 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) CHASE4 PF05228.13 gi|21229201|ref|NP_635123.1| - 9.3e-38 129.5 0.0 3.3e-37 127.8 0.0 1.9 2 0 0 2 2 2 1 CHASE4 domain HATPase_c PF02518.26 gi|21229201|ref|NP_635123.1| - 5.6e-32 110.6 0.2 1.1e-31 109.7 0.2 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|21229201|ref|NP_635123.1| - 9e-19 67.3 0.4 6.9e-18 64.4 0.1 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|21229201|ref|NP_635123.1| - 4.7e-06 26.8 0.0 0.00011 22.5 0.0 2.3 1 1 0 1 1 1 1 PAS fold HATPase_c_5 PF14501.6 gi|21229201|ref|NP_635123.1| - 1.5e-05 24.9 0.0 3.7e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 gi|21229201|ref|NP_635123.1| - 0.00093 19.2 0.0 0.0018 18.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|21229201|ref|NP_635123.1| - 0.024 14.5 0.1 0.047 13.5 0.1 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|21229201|ref|NP_635123.1| - 0.05 14.0 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 HAMP domain CxxCxxCC PF03692.15 gi|21229202|ref|NP_635124.1| - 5.1e-06 27.1 1.6 1.5e-05 25.6 0.7 2.2 2 1 1 3 3 3 1 Putative zinc- or iron-chelating domain Kri1_C PF12936.7 gi|21229202|ref|NP_635124.1| - 0.088 13.0 0.1 0.35 11.1 0.0 1.9 2 0 0 2 2 2 0 KRI1-like family C-terminal CHASE4 PF05228.13 gi|21229203|ref|NP_635125.1| - 1.5e-40 138.6 0.0 9.1e-39 132.8 0.0 2.3 2 0 0 2 2 2 1 CHASE4 domain HATPase_c PF02518.26 gi|21229203|ref|NP_635125.1| - 1.9e-29 102.4 0.2 4.6e-29 101.2 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|21229203|ref|NP_635125.1| - 2.7e-20 72.2 0.0 7.7e-20 70.7 0.0 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|21229203|ref|NP_635125.1| - 4.5e-15 55.8 0.0 8.9e-15 54.9 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|21229203|ref|NP_635125.1| - 1.1e-06 28.8 0.1 8.6e-06 26.0 0.0 2.5 2 1 0 2 2 2 1 PAS domain HATPase_c_5 PF14501.6 gi|21229203|ref|NP_635125.1| - 1e-05 25.3 0.1 0.00013 21.8 0.0 2.6 2 0 0 2 2 2 1 GHKL domain PAS_10 PF13596.6 gi|21229203|ref|NP_635125.1| - 0.0053 17.3 0.0 0.023 15.3 0.0 2.2 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 gi|21229203|ref|NP_635125.1| - 0.0083 16.0 0.0 0.019 14.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|21229203|ref|NP_635125.1| - 0.017 15.5 0.1 0.038 14.4 0.1 1.6 1 0 0 1 1 1 0 HAMP domain HATPase_c_2 PF13581.6 gi|21229203|ref|NP_635125.1| - 0.028 14.4 0.0 0.087 12.8 0.0 1.8 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain DUF5481 PF17578.2 gi|21229203|ref|NP_635125.1| - 0.05 14.0 0.4 0.13 12.6 0.4 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5481) PAS_8 PF13188.7 gi|21229203|ref|NP_635125.1| - 0.065 13.3 0.1 0.26 11.3 0.0 2.0 2 0 0 2 2 2 0 PAS domain STN1_2 PF09170.10 gi|21229203|ref|NP_635125.1| - 0.12 12.6 0.1 0.33 11.1 0.1 1.8 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 Ly49 PF08391.10 gi|21229203|ref|NP_635125.1| - 0.71 10.2 2.8 31 4.9 0.2 3.0 3 0 0 3 3 3 0 Ly49-like protein, N-terminal region DUF1638 PF07796.11 gi|21229204|ref|NP_635126.1| - 1.1e-33 116.6 0.0 1.4e-33 116.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) Putative_PNPOx PF01243.20 gi|21229206|ref|NP_635128.1| - 1.3e-20 73.4 0.0 1.6e-20 73.1 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|21229206|ref|NP_635128.1| - 0.0026 17.3 0.0 0.0032 17.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Pyridox_oxase_2 PF12766.7 gi|21229206|ref|NP_635128.1| - 0.073 13.7 0.0 0.099 13.3 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.12 gi|21229206|ref|NP_635128.1| - 0.17 11.7 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) dCMP_cyt_deam_1 PF00383.23 gi|21229207|ref|NP_635129.1| - 1.2e-11 44.3 0.0 1.8e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|21229207|ref|NP_635129.1| - 2.4e-07 30.6 0.0 3.2e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC2 PF18772.1 gi|21229207|ref|NP_635129.1| - 0.025 14.6 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 APOBEC2 NAD2 PF18782.1 gi|21229207|ref|NP_635129.1| - 0.046 13.8 0.0 0.074 13.2 0.0 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 OTT_1508_deam PF14441.6 gi|21229207|ref|NP_635129.1| - 0.067 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 OTT_1508-like deaminase NAD1 PF18778.1 gi|21229207|ref|NP_635129.1| - 0.14 12.2 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 APOBEC3 PF18771.1 gi|21229207|ref|NP_635129.1| - 0.14 12.3 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 APOBEC3 Fasciclin PF02469.22 gi|21229208|ref|NP_635130.1| - 1e-37 129.2 0.0 1.4e-37 128.8 0.0 1.1 1 0 0 1 1 1 1 Fasciclin domain Putative_PNPOx PF01243.20 gi|21229209|ref|NP_635131.1| - 5.5e-18 64.9 0.0 6.9e-18 64.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|21229209|ref|NP_635131.1| - 1.8e-08 34.1 0.0 2.2e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Pyridox_ox_2 PF12900.7 gi|21229209|ref|NP_635131.1| - 1.1e-07 32.0 0.0 1.4e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_oxidase_2 PF13883.6 gi|21229209|ref|NP_635131.1| - 0.018 15.0 0.0 0.033 14.2 0.0 1.4 1 1 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase PAS_3 PF08447.12 gi|21229210|ref|NP_635132.1| - 2.9e-19 69.1 0.2 5.3e-19 68.3 0.2 1.4 1 0 0 1 1 1 1 PAS fold GAF_2 PF13185.6 gi|21229210|ref|NP_635132.1| - 2.3e-12 47.4 0.0 3.4e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.10 gi|21229210|ref|NP_635132.1| - 0.0013 18.9 0.0 0.0022 18.2 0.0 1.3 1 0 0 1 1 1 1 PAS fold GAF_3 PF13492.6 gi|21229210|ref|NP_635132.1| - 0.0024 18.2 0.0 0.0034 17.7 0.0 1.2 1 0 0 1 1 1 1 GAF domain PAS_9 PF13426.7 gi|21229210|ref|NP_635132.1| - 0.0097 16.1 0.1 0.02 15.2 0.1 1.5 1 0 0 1 1 1 1 PAS domain GAF PF01590.26 gi|21229210|ref|NP_635132.1| - 0.043 14.5 0.0 0.065 13.9 0.0 1.3 1 0 0 1 1 1 0 GAF domain PAS PF00989.25 gi|21229210|ref|NP_635132.1| - 0.068 13.2 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 PAS fold SUKH_6 PF14568.6 gi|21229210|ref|NP_635132.1| - 0.13 12.6 0.5 0.45 10.9 0.5 1.9 1 1 0 1 1 1 0 SMI1-KNR4 cell-wall Phosphorylase PF00343.20 gi|21229211|ref|NP_635133.1| - 1e-27 96.8 0.0 8.7e-19 67.3 0.0 3.3 3 1 1 4 4 4 2 Carbohydrate phosphorylase TPR_1 PF00515.28 gi|21229212|ref|NP_635134.1| - 4.5e-42 140.2 13.3 1.8e-07 30.7 0.4 6.9 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21229212|ref|NP_635134.1| - 2.9e-39 130.0 17.5 6.5e-07 29.0 0.0 7.0 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21229212|ref|NP_635134.1| - 3e-34 116.4 4.6 2.3e-08 33.6 0.0 6.0 2 2 4 6 6 6 5 TPR repeat TPR_8 PF13181.6 gi|21229212|ref|NP_635134.1| - 3.4e-34 114.2 5.1 1.9e-07 30.7 0.0 6.5 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21229212|ref|NP_635134.1| - 5.1e-30 103.8 6.0 1.9e-10 41.2 1.8 4.4 3 1 0 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|21229212|ref|NP_635134.1| - 1.3e-25 87.9 4.9 0.001 19.3 0.1 6.8 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21229212|ref|NP_635134.1| - 8.8e-23 79.1 10.9 7.2e-06 26.4 0.0 6.9 1 1 6 7 7 7 4 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21229212|ref|NP_635134.1| - 1.1e-20 73.7 7.2 6.5e-06 26.3 0.1 6.0 3 2 2 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21229212|ref|NP_635134.1| - 2.6e-18 66.3 4.0 1.2e-06 28.9 0.1 3.7 2 1 0 3 3 3 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21229212|ref|NP_635134.1| - 4.2e-18 65.3 0.0 0.0001 22.4 0.0 4.3 2 1 2 4 4 4 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21229212|ref|NP_635134.1| - 2e-15 56.7 0.9 3.5e-06 27.2 0.2 3.2 2 1 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|21229212|ref|NP_635134.1| - 4.1e-12 45.2 0.9 0.001 18.9 0.0 5.6 7 0 0 7 7 5 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21229212|ref|NP_635134.1| - 1.3e-11 44.3 4.5 0.011 16.3 0.0 5.7 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_15 PF13429.6 gi|21229212|ref|NP_635134.1| - 2.5e-07 30.2 1.6 0.084 12.1 0.0 3.9 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21229212|ref|NP_635134.1| - 1.2e-06 28.1 3.7 0.26 11.2 0.2 5.5 6 0 0 6 6 5 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|21229212|ref|NP_635134.1| - 1.8e-06 27.2 1.4 0.016 14.1 0.2 2.5 2 1 0 2 2 2 2 NMDA receptor-regulated protein 1 SRP_TPR_like PF17004.5 gi|21229212|ref|NP_635134.1| - 2.5e-06 27.5 1.1 0.016 15.2 0.1 3.4 1 1 3 4 4 4 2 Putative TPR-like repeat ChAPs PF09295.10 gi|21229212|ref|NP_635134.1| - 2.7e-06 26.7 0.1 0.016 14.2 0.0 2.1 1 1 0 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) TPR_20 PF14561.6 gi|21229212|ref|NP_635134.1| - 3.4e-06 27.3 2.6 0.065 13.6 0.1 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|21229212|ref|NP_635134.1| - 1.7e-05 24.8 0.7 0.42 10.7 0.0 3.7 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat BTAD PF03704.17 gi|21229212|ref|NP_635134.1| - 0.00018 21.9 9.8 0.00077 19.9 0.6 3.2 3 1 0 3 3 3 1 Bacterial transcriptional activator domain TOM20_plant PF06552.12 gi|21229212|ref|NP_635134.1| - 0.0004 20.2 2.8 0.017 14.9 0.8 3.1 2 1 0 2 2 2 1 Plant specific mitochondrial import receptor subunit TOM20 DUF3856 PF12968.7 gi|21229212|ref|NP_635134.1| - 0.00086 19.4 5.4 0.15 12.1 0.0 4.3 2 2 2 5 5 5 1 Domain of Unknown Function (DUF3856) TPR_21 PF09976.9 gi|21229212|ref|NP_635134.1| - 0.0013 18.5 1.2 5.2 6.7 0.0 3.5 2 1 2 4 4 4 1 Tetratricopeptide repeat-like domain ANAPC5 PF12862.7 gi|21229212|ref|NP_635134.1| - 0.0015 18.5 1.0 2 8.6 0.0 3.4 3 1 0 3 3 3 1 Anaphase-promoting complex subunit 5 Alkyl_sulf_dimr PF14863.6 gi|21229212|ref|NP_635134.1| - 0.0033 17.9 0.1 0.49 10.8 0.0 2.6 2 1 0 2 2 2 1 Alkyl sulfatase dimerisation DUF4919 PF16266.5 gi|21229212|ref|NP_635134.1| - 0.035 14.1 0.0 8.1 6.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4919) TPR_4 PF07721.14 gi|21229212|ref|NP_635134.1| - 0.036 14.7 0.2 14 6.7 0.0 3.6 3 0 0 3 3 3 0 Tetratricopeptide repeat TruB_N PF01509.18 gi|21229212|ref|NP_635134.1| - 0.04 14.3 0.0 0.17 12.3 0.0 1.9 2 0 0 2 2 2 0 TruB family pseudouridylate synthase (N terminal domain) DUF3808 PF10300.9 gi|21229212|ref|NP_635134.1| - 0.058 12.1 0.5 1.6 7.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3808) FliD_C PF07195.12 gi|21229212|ref|NP_635134.1| - 0.062 12.7 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus FAT PF02259.23 gi|21229212|ref|NP_635134.1| - 0.11 11.8 2.5 1 8.5 1.0 2.8 1 1 1 2 2 2 0 FAT domain PPR PF01535.20 gi|21229212|ref|NP_635134.1| - 0.15 12.4 4.6 1.9 8.9 0.0 4.5 5 0 0 5 5 4 0 PPR repeat DUF4810 PF16068.5 gi|21229212|ref|NP_635134.1| - 0.15 12.6 0.2 7.8 7.1 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4810) I-set PF07679.16 gi|21229213|ref|NP_635135.1| - 0.0088 16.1 1.9 6.6 6.9 0.0 4.4 4 2 0 4 4 4 2 Immunoglobulin I-set domain DUF11 PF01345.18 gi|21229213|ref|NP_635135.1| - 0.09 13.1 9.6 0.81 10.0 0.8 3.4 2 1 0 2 2 2 0 Domain of unknown function DUF11 Lantibiotic_a PF14867.6 gi|21229213|ref|NP_635135.1| - 0.14 11.9 3.4 4.2 7.2 0.2 2.4 2 0 0 2 2 2 0 Lantibiotic alpha Peptidase_M3 PF01432.20 gi|21229215|ref|NP_635137.1| - 2.1e-29 103.1 6.2 3.3e-29 102.5 6.2 1.3 1 0 0 1 1 1 1 Peptidase family M3 Peptidase_M3_N PF08439.10 gi|21229215|ref|NP_635137.1| - 0.0073 16.6 0.4 0.046 14.0 0.1 2.7 2 0 0 2 2 2 1 Oligopeptidase F SCAN PF02023.17 gi|21229215|ref|NP_635137.1| - 0.05 13.4 0.2 0.54 10.1 0.1 2.4 2 0 0 2 2 2 0 SCAN domain CdiA_C_tRNase PF18664.1 gi|21229215|ref|NP_635137.1| - 0.18 12.0 1.4 1.5 9.1 0.1 3.1 5 0 0 5 5 5 0 CdiA C-terminal tRNase domain Fic PF02661.18 gi|21229217|ref|NP_635139.1| - 5.3e-21 75.3 0.0 4.2e-20 72.4 0.0 2.3 2 0 0 2 2 2 1 Fic/DOC family HTH_DeoR PF08220.12 gi|21229217|ref|NP_635139.1| - 5.5e-05 22.8 0.0 0.00016 21.3 0.0 1.8 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Fic_N PF13784.6 gi|21229217|ref|NP_635139.1| - 0.00025 21.0 0.9 0.00069 19.6 0.3 2.0 2 0 0 2 2 2 1 Fic/DOC family N-terminal DUF4172 PF13776.6 gi|21229217|ref|NP_635139.1| - 0.00035 20.8 0.1 0.0009 19.5 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4172) HTH_11 PF08279.12 gi|21229217|ref|NP_635139.1| - 0.0046 16.9 0.0 0.016 15.1 0.0 2.0 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 gi|21229217|ref|NP_635139.1| - 0.0051 16.6 0.0 0.042 13.6 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|21229217|ref|NP_635139.1| - 0.019 14.8 0.7 0.073 13.0 0.2 2.3 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB LexA_DNA_bind PF01726.16 gi|21229217|ref|NP_635139.1| - 0.02 14.6 0.3 0.081 12.7 0.0 2.1 2 0 0 2 2 2 0 LexA DNA binding domain Penicillinase_R PF03965.16 gi|21229217|ref|NP_635139.1| - 0.067 13.6 0.7 0.26 11.6 0.1 2.4 2 1 0 2 2 2 0 Penicillinase repressor FaeA PF04703.12 gi|21229217|ref|NP_635139.1| - 0.072 13.5 0.3 1.6 9.2 0.0 2.6 2 0 0 2 2 2 0 FaeA-like protein Glyco_hydro_57 PF03065.15 gi|21229217|ref|NP_635139.1| - 0.074 12.2 3.8 1.5 7.9 0.5 2.3 2 0 0 2 2 2 0 Glycosyl hydrolase family 57 MarR_2 PF12802.7 gi|21229217|ref|NP_635139.1| - 0.14 12.1 0.1 0.5 10.3 0.0 2.0 3 0 0 3 3 3 0 MarR family PuR_N PF09182.10 gi|21229217|ref|NP_635139.1| - 0.14 12.1 0.0 0.54 10.2 0.0 2.1 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal Clathrin_H_link PF13838.6 gi|21229217|ref|NP_635139.1| - 0.15 12.0 0.1 0.46 10.4 0.1 1.8 1 0 0 1 1 1 0 Clathrin-H-link TFIIE_beta PF02186.15 gi|21229217|ref|NP_635139.1| - 1 9.7 4.2 2.5 8.4 0.0 3.3 4 0 0 4 4 4 0 TFIIE beta subunit core domain DSPc PF00782.20 gi|21229218|ref|NP_635140.1| - 1e-06 28.6 0.0 1.4e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 gi|21229218|ref|NP_635140.1| - 0.00046 19.8 0.0 0.00057 19.5 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 gi|21229218|ref|NP_635140.1| - 0.0012 18.8 0.0 0.0016 18.5 0.0 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family MarR PF01047.22 gi|21229219|ref|NP_635141.1| - 2.1e-10 40.4 0.0 4.6e-10 39.3 0.0 1.6 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|21229219|ref|NP_635141.1| - 2.3e-09 37.0 0.0 4.5e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21229219|ref|NP_635141.1| - 1e-08 35.5 0.1 2.1e-07 31.3 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|21229219|ref|NP_635141.1| - 0.00025 21.2 0.0 0.00057 20.0 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 gi|21229219|ref|NP_635141.1| - 0.00069 19.1 0.0 0.0028 17.2 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|21229219|ref|NP_635141.1| - 0.0024 17.7 0.0 0.0048 16.7 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB zf_PR_Knuckle PF18445.1 gi|21229219|ref|NP_635141.1| - 0.035 13.9 0.0 6.2 6.7 0.0 2.5 2 0 0 2 2 2 0 PR zinc knuckle motif HTH_5 PF01022.20 gi|21229219|ref|NP_635141.1| - 0.095 12.6 2.6 4.1 7.4 0.0 2.6 2 1 1 3 3 3 0 Bacterial regulatory protein, arsR family Lon_C PF05362.13 gi|21229220|ref|NP_635142.1| - 6.7e-89 296.9 1.7 1.4e-88 295.8 1.7 1.6 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA PF00004.29 gi|21229220|ref|NP_635142.1| - 3.5e-21 76.0 0.0 2.1e-20 73.5 0.0 2.4 3 0 0 3 3 1 1 ATPase family associated with various cellular activities (AAA) LON_substr_bdg PF02190.16 gi|21229220|ref|NP_635142.1| - 3e-13 50.1 0.2 6.4e-13 49.1 0.2 1.5 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain ChlI PF13541.6 gi|21229220|ref|NP_635142.1| - 2.8e-09 36.9 0.6 1.2e-08 34.9 0.1 2.3 3 0 0 3 3 2 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.14 gi|21229220|ref|NP_635142.1| - 4.1e-09 36.6 0.0 1e-07 32.0 0.0 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|21229220|ref|NP_635142.1| - 4.6e-07 30.4 0.1 2.9e-05 24.5 0.1 3.1 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|21229220|ref|NP_635142.1| - 4.7e-06 26.9 0.0 0.0002 21.6 0.0 2.6 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|21229220|ref|NP_635142.1| - 8.5e-05 22.4 1.6 0.00079 19.2 0.0 2.9 3 1 0 3 3 3 1 IstB-like ATP binding protein RuvB_N PF05496.12 gi|21229220|ref|NP_635142.1| - 9.1e-05 22.3 0.2 0.00039 20.2 0.0 2.2 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_PrkA PF08298.11 gi|21229220|ref|NP_635142.1| - 0.00031 19.8 0.0 0.00069 18.6 0.0 1.5 1 0 0 1 1 1 1 PrkA AAA domain Rad17 PF03215.15 gi|21229220|ref|NP_635142.1| - 0.00035 20.6 0.0 0.00093 19.2 0.0 1.7 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_18 PF13238.6 gi|21229220|ref|NP_635142.1| - 0.00037 21.1 1.8 0.026 15.1 0.1 3.5 4 1 0 4 4 3 1 AAA domain AAA_2 PF07724.14 gi|21229220|ref|NP_635142.1| - 0.00042 20.5 0.0 0.0016 18.6 0.0 2.1 2 1 0 2 2 1 1 AAA domain (Cdc48 subfamily) DUF4899 PF16240.5 gi|21229220|ref|NP_635142.1| - 0.0038 16.5 5.8 0.53 9.4 0.2 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4899) DUF815 PF05673.13 gi|21229220|ref|NP_635142.1| - 0.0059 15.8 0.0 0.021 14.0 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF815) Birna_VP4 PF01768.16 gi|21229220|ref|NP_635142.1| - 0.0069 16.2 0.1 0.016 15.0 0.1 1.6 1 0 0 1 1 1 1 Birnavirus VP4 protein AAA_3 PF07726.11 gi|21229220|ref|NP_635142.1| - 0.0077 16.1 0.0 0.044 13.6 0.0 2.3 3 1 0 3 3 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|21229220|ref|NP_635142.1| - 0.0099 15.6 0.4 0.06 13.1 0.1 2.2 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 gi|21229220|ref|NP_635142.1| - 0.011 15.5 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase TsaE PF02367.17 gi|21229220|ref|NP_635142.1| - 0.013 15.5 0.6 0.025 14.6 0.1 1.7 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 gi|21229220|ref|NP_635142.1| - 0.015 15.2 0.0 0.2 11.5 0.0 2.3 2 0 0 2 2 2 0 NACHT domain TIP49 PF06068.13 gi|21229220|ref|NP_635142.1| - 0.015 14.5 0.1 0.015 14.5 0.1 2.2 2 0 0 2 2 2 0 TIP49 P-loop domain ATPase_2 PF01637.18 gi|21229220|ref|NP_635142.1| - 0.025 14.5 1.3 3 7.7 0.0 3.3 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|21229220|ref|NP_635142.1| - 0.029 14.4 0.0 0.076 13.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|21229220|ref|NP_635142.1| - 0.03 14.7 0.1 0.13 12.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|21229220|ref|NP_635142.1| - 0.051 14.0 0.0 0.18 12.2 0.0 2.0 2 0 0 2 2 1 0 RNA helicase NTPase_1 PF03266.15 gi|21229220|ref|NP_635142.1| - 0.056 13.4 5.1 0.084 12.8 0.1 3.5 3 1 0 4 4 4 0 NTPase AAA_28 PF13521.6 gi|21229220|ref|NP_635142.1| - 0.071 13.3 0.4 0.2 11.9 0.0 2.1 2 0 0 2 2 1 0 AAA domain NB-ARC PF00931.22 gi|21229220|ref|NP_635142.1| - 0.072 12.3 1.7 0.11 11.7 0.1 2.0 2 0 0 2 2 2 0 NB-ARC domain AAA_11 PF13086.6 gi|21229220|ref|NP_635142.1| - 0.076 12.8 2.5 0.17 11.6 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|21229220|ref|NP_635142.1| - 0.078 13.1 0.0 0.24 11.5 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|21229220|ref|NP_635142.1| - 0.12 11.8 0.0 0.37 10.3 0.0 1.9 1 0 0 1 1 1 0 P-loop containing dynein motor region Cytidylate_kin PF02224.18 gi|21229220|ref|NP_635142.1| - 0.13 12.0 1.6 0.41 10.4 0.1 2.3 2 0 0 2 2 2 0 Cytidylate kinase Mg_chelatase PF01078.21 gi|21229220|ref|NP_635142.1| - 0.14 11.5 0.4 0.44 9.9 0.1 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ABC_tran PF00005.27 gi|21229220|ref|NP_635142.1| - 0.19 12.2 1.2 0.81 10.2 0.1 2.4 2 0 0 2 2 2 0 ABC transporter AAA_23 PF13476.6 gi|21229220|ref|NP_635142.1| - 8.3 6.9 12.3 1.3 9.5 0.0 2.8 1 1 1 2 2 1 0 AAA domain FMN_red PF03358.15 gi|21229221|ref|NP_635143.1| - 2.4e-23 82.6 0.0 3.3e-23 82.2 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|21229221|ref|NP_635143.1| - 7.1e-13 48.7 0.0 8.7e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|21229221|ref|NP_635143.1| - 0.002 18.4 0.0 0.0035 17.6 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain PIN PF01850.21 gi|21229222|ref|NP_635144.1| - 7.1e-13 49.1 0.2 8.1e-13 49.0 0.2 1.0 1 0 0 1 1 1 1 PIN domain PH_8 PF15409.6 gi|21229222|ref|NP_635144.1| - 0.14 12.4 0.2 1.1 9.6 0.0 2.0 1 1 1 2 2 2 0 Pleckstrin homology domain MFS_1 PF07690.16 gi|21229223|ref|NP_635145.1| - 4e-46 157.5 44.4 4e-46 157.5 44.4 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|21229223|ref|NP_635145.1| - 1.5e-10 40.5 6.0 1.5e-10 40.5 6.0 2.6 3 0 0 3 3 3 1 Sugar (and other) transporter MFS_3 PF05977.13 gi|21229223|ref|NP_635145.1| - 1.6e-05 23.6 13.6 2.4e-05 22.9 13.6 1.4 1 1 0 1 1 1 1 Transmembrane secretion effector MFS_2 PF13347.6 gi|21229223|ref|NP_635145.1| - 0.00098 17.8 3.4 0.00098 17.8 3.4 2.9 1 1 1 2 2 2 2 MFS/sugar transport protein DUF5527 PF17665.1 gi|21229223|ref|NP_635145.1| - 0.37 10.3 5.1 0.25 10.8 0.3 2.6 3 0 0 3 3 3 0 Family of unknown function (DUF5527) Abhydrolase_1 PF00561.20 gi|21229224|ref|NP_635146.1| - 4.2e-12 46.3 0.0 2e-11 44.1 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|21229224|ref|NP_635146.1| - 5.6e-05 22.5 0.0 0.00026 20.3 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|21229224|ref|NP_635146.1| - 0.0013 19.4 0.0 0.0017 19.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family GHMP_kinases_C PF08544.13 gi|21229224|ref|NP_635146.1| - 0.011 16.1 0.0 0.024 15.0 0.0 1.5 1 0 0 1 1 1 0 GHMP kinases C terminal FSH1 PF03959.13 gi|21229224|ref|NP_635146.1| - 0.017 14.8 0.0 0.032 13.9 0.0 1.4 1 0 0 1 1 1 0 Serine hydrolase (FSH1) DUF4316 PF14195.6 gi|21229224|ref|NP_635146.1| - 0.024 14.4 0.0 0.047 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4316) DLH PF01738.18 gi|21229224|ref|NP_635146.1| - 0.027 14.0 0.0 0.2 11.2 0.0 2.0 2 0 0 2 2 2 0 Dienelactone hydrolase family Thioesterase PF00975.20 gi|21229224|ref|NP_635146.1| - 0.038 14.1 0.0 0.044 13.9 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Sugar-bind PF04198.13 gi|21229224|ref|NP_635146.1| - 0.046 12.8 0.0 0.063 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative sugar-binding domain DUF726 PF05277.12 gi|21229224|ref|NP_635146.1| - 0.16 10.8 0.0 0.27 10.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Lipase_3 PF01764.25 gi|21229224|ref|NP_635146.1| - 0.19 11.6 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) LysE PF01810.18 gi|21229225|ref|NP_635147.1| - 1.9e-32 112.3 13.2 2.3e-32 112.1 13.2 1.1 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 gi|21229225|ref|NP_635147.1| - 0.011 15.5 9.1 0.13 12.0 9.1 2.3 1 1 0 1 1 1 0 Integral membrane protein TerC family DUF1418 PF07214.12 gi|21229225|ref|NP_635147.1| - 0.053 13.4 0.5 0.1 12.5 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) DUF3262 PF11660.8 gi|21229225|ref|NP_635147.1| - 0.11 12.9 4.7 4.1 7.9 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3262) Phage_holin_3_3 PF16083.5 gi|21229225|ref|NP_635147.1| - 0.71 10.0 9.3 0.34 11.1 2.3 2.6 2 0 0 2 2 2 0 LydA holin phage, holin superfamily III Cas_Cas1 PF01867.16 gi|21229227|ref|NP_635149.1| - 1.4e-24 86.7 0.0 2.4e-24 86.0 0.0 1.4 1 0 0 1 1 1 1 CRISPR associated protein Cas1 DUF3303 PF11746.8 gi|21229229|ref|NP_635151.1| - 4.8e-05 23.6 0.0 6.2e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) PAP2 PF01569.21 gi|21229230|ref|NP_635152.1| - 5.3e-16 58.6 8.1 5.3e-16 58.6 8.1 1.6 2 0 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|21229230|ref|NP_635152.1| - 5.2e-05 23.0 11.5 0.00025 20.8 11.5 1.9 1 1 0 1 1 1 1 PAP2 superfamily PsaX PF08078.12 gi|21229230|ref|NP_635152.1| - 0.13 12.3 7.9 0.79 9.7 2.5 3.1 3 0 0 3 3 3 0 PsaX family PAP2_C PF14360.6 gi|21229230|ref|NP_635152.1| - 1.3 9.6 6.4 0.29 11.7 1.2 2.3 2 1 0 2 2 2 0 PAP2 superfamily C-terminal DUF3488 PF11992.8 gi|21229230|ref|NP_635152.1| - 5.3 5.9 8.4 0.99 8.3 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3488) DUF2795 PF11387.8 gi|21229231|ref|NP_635153.1| - 2.2e-10 40.6 0.0 3.2e-10 40.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) MatE PF01554.18 gi|21229232|ref|NP_635154.1| - 4.4e-57 192.2 33.9 1.9e-29 102.4 14.0 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|21229232|ref|NP_635154.1| - 7.9e-12 45.4 17.4 3.1e-08 33.8 11.0 4.0 3 2 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain DUF5083 PF16890.5 gi|21229232|ref|NP_635154.1| - 0.045 13.5 0.7 0.1 12.3 0.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5083) PfkB PF00294.24 gi|21229233|ref|NP_635155.1| - 4.9e-46 157.4 0.0 6.1e-46 157.1 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 gi|21229233|ref|NP_635155.1| - 0.023 14.1 0.0 0.082 12.3 0.0 1.8 2 0 0 2 2 2 0 Phosphomethylpyrimidine kinase YdjM PF04307.14 gi|21229234|ref|NP_635156.1| - 1.7e-14 53.5 6.5 2.3e-14 53.0 6.5 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Zn_dep_PLPC PF00882.18 gi|21229234|ref|NP_635156.1| - 0.12 12.3 0.0 0.17 11.9 0.0 1.4 1 1 0 1 1 1 0 Zinc dependent phospholipase C FixQ PF05545.11 gi|21229234|ref|NP_635156.1| - 0.36 10.8 0.0 0.36 10.8 0.0 2.8 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ DUF347 PF03988.12 gi|21229234|ref|NP_635156.1| - 0.38 11.0 7.9 6.1 7.1 0.1 3.1 3 0 0 3 3 3 0 Repeat of Unknown Function (DUF347) BatA PF07584.11 gi|21229234|ref|NP_635156.1| - 0.95 9.9 0.1 0.95 9.9 0.1 2.7 3 0 0 3 3 3 0 Aerotolerance regulator N-terminal Peptidase_M48 PF01435.18 gi|21229236|ref|NP_635158.1| - 6e-43 146.9 0.0 1e-42 146.2 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|21229236|ref|NP_635158.1| - 2.7e-07 30.1 0.5 3.1e-06 26.6 0.0 2.2 2 0 0 2 2 2 1 BlaR1 peptidase M56 DUF1129 PF06570.11 gi|21229236|ref|NP_635158.1| - 0.038 13.5 0.1 0.038 13.5 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) DUF4157 PF13699.6 gi|21229236|ref|NP_635158.1| - 0.11 12.8 0.0 0.21 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) ABC_tran PF00005.27 gi|21229237|ref|NP_635159.1| - 3.1e-35 121.7 0.0 7.8e-35 120.4 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|21229237|ref|NP_635159.1| - 4.9e-11 43.0 0.6 1.3e-06 28.5 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|21229237|ref|NP_635159.1| - 4.1e-06 26.8 0.2 0.028 14.1 0.1 2.3 1 1 1 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|21229237|ref|NP_635159.1| - 1.1e-05 26.0 1.1 2.3e-05 25.0 1.1 1.5 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|21229237|ref|NP_635159.1| - 1.9e-05 24.7 0.0 3.3e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 gi|21229237|ref|NP_635159.1| - 8e-05 22.3 0.1 0.00015 21.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|21229237|ref|NP_635159.1| - 0.0057 16.1 0.1 0.048 13.1 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|21229237|ref|NP_635159.1| - 0.019 14.8 0.3 0.047 13.6 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase AAA_30 PF13604.6 gi|21229237|ref|NP_635159.1| - 0.025 14.3 0.0 0.38 10.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 gi|21229237|ref|NP_635159.1| - 0.029 14.8 0.3 0.21 12.0 0.3 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|21229237|ref|NP_635159.1| - 0.063 13.6 0.2 0.16 12.2 0.2 1.9 1 1 0 1 1 1 0 AAA domain CBM_26 PF16824.5 gi|21229237|ref|NP_635159.1| - 0.11 12.7 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 C-terminal carbohydrate-binding module SRP54 PF00448.22 gi|21229237|ref|NP_635159.1| - 0.13 11.9 0.1 0.26 10.9 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ABC2_membrane PF01061.24 gi|21229238|ref|NP_635160.1| - 4.4e-44 150.4 21.9 4.4e-44 150.4 21.9 1.9 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|21229238|ref|NP_635160.1| - 2.5e-18 66.3 31.1 2.5e-18 66.3 31.1 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|21229238|ref|NP_635160.1| - 9.7e-10 38.2 18.8 1.4e-09 37.7 18.8 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein LysE PF01810.18 gi|21229239|ref|NP_635161.1| - 2.8e-19 69.4 8.6 3.6e-19 69.0 8.6 1.1 1 0 0 1 1 1 1 LysE type translocator CobA_CobO_BtuR PF02572.15 gi|21229240|ref|NP_635162.1| - 9.9e-54 182.2 0.0 1.1e-53 182.0 0.0 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AAA_24 PF13479.6 gi|21229240|ref|NP_635162.1| - 0.023 14.4 0.0 0.088 12.5 0.0 1.8 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|21229240|ref|NP_635162.1| - 0.025 14.3 0.1 2.4 7.8 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein MscL PF01741.18 gi|21229241|ref|NP_635163.1| - 1.5e-13 51.1 1.6 1.6e-13 51.0 1.6 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL Flavodoxin_5 PF12724.7 gi|21229242|ref|NP_635164.1| - 2.5e-29 102.4 0.0 3.1e-29 102.1 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|21229242|ref|NP_635164.1| - 9e-08 32.4 0.0 1.3e-07 31.9 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 gi|21229242|ref|NP_635164.1| - 1.3e-05 25.0 0.0 1.4e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain AP_endonuc_2 PF01261.24 gi|21229242|ref|NP_635164.1| - 0.095 12.1 0.0 0.2 11.1 0.0 1.5 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel ResIII PF04851.15 gi|21229243|ref|NP_635165.1| - 4.8e-33 114.6 2.9 6e-33 114.3 0.1 2.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit EcoEI_R_C PF08463.10 gi|21229243|ref|NP_635165.1| - 1.7e-17 64.1 0.1 6.4e-16 58.9 0.0 2.8 3 0 0 3 3 3 1 EcoEI R protein C-terminal SWI2_SNF2 PF18766.1 gi|21229243|ref|NP_635165.1| - 3.6e-17 62.8 0.1 7.5e-17 61.8 0.1 1.4 1 0 0 1 1 1 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|21229243|ref|NP_635165.1| - 2.6e-10 40.6 0.2 3.4e-08 33.7 0.0 3.4 2 1 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) Helicase_C PF00271.31 gi|21229243|ref|NP_635165.1| - 1.2e-05 25.6 0.0 5.6e-05 23.5 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|21229243|ref|NP_635165.1| - 6.6e-05 22.7 0.0 0.00015 21.6 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF2075 PF09848.9 gi|21229243|ref|NP_635165.1| - 0.0012 18.2 0.0 0.0028 17.0 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) HSDR_N_2 PF13588.6 gi|21229243|ref|NP_635165.1| - 0.019 15.0 0.0 0.058 13.4 0.0 1.9 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) Ribosomal_L38e PF01781.18 gi|21229243|ref|NP_635165.1| - 0.021 14.9 0.2 0.086 13.0 0.2 2.0 1 0 0 1 1 1 0 Ribosomal L38e protein family PhoH PF02562.16 gi|21229243|ref|NP_635165.1| - 0.022 14.2 0.1 0.35 10.3 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein AAA_19 PF13245.6 gi|21229243|ref|NP_635165.1| - 0.058 13.7 0.0 0.15 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain SRP54_N PF02881.19 gi|21229243|ref|NP_635165.1| - 0.17 12.2 1.3 0.67 10.2 0.0 2.8 3 0 0 3 3 2 0 SRP54-type protein, helical bundle domain DUF87 PF01935.17 gi|21229243|ref|NP_635165.1| - 0.58 10.2 2.4 6.2 6.8 0.1 2.9 2 1 0 2 2 2 0 Helicase HerA, central domain Methylase_S PF01420.19 gi|21229244|ref|NP_635166.1| - 7.5e-47 159.7 4.6 4.2e-24 85.6 0.2 2.0 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain TPR_12 PF13424.6 gi|21229245|ref|NP_635167.1| - 1.2e-13 51.1 17.1 1e-05 25.7 0.0 7.0 3 2 5 8 8 8 4 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21229245|ref|NP_635167.1| - 1.2e-07 31.4 26.7 0.04 14.1 2.3 8.1 8 0 0 8 8 8 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21229245|ref|NP_635167.1| - 4.3e-07 29.5 21.8 0.75 10.1 1.9 7.6 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21229245|ref|NP_635167.1| - 5.2e-07 29.3 7.4 2.4 8.2 0.0 6.7 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21229245|ref|NP_635167.1| - 8.4e-05 23.1 4.6 15 6.7 0.0 6.7 6 2 1 7 7 7 0 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21229245|ref|NP_635167.1| - 0.00032 20.4 21.2 1.4 8.9 0.0 7.2 8 1 0 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21229245|ref|NP_635167.1| - 0.014 16.0 0.3 67 4.3 0.0 5.1 6 0 0 6 6 5 0 Tetratricopeptide repeat ArnB_C PF18677.1 gi|21229245|ref|NP_635167.1| - 0.024 14.8 0.2 0.22 11.6 0.2 2.7 1 0 0 1 1 1 0 Archaellum regulatory network B, C-terminal domain CoiA PF06054.11 gi|21229245|ref|NP_635167.1| - 0.072 12.2 0.8 0.22 10.6 0.2 1.8 1 1 1 2 2 2 0 Competence protein CoiA-like family ssDNA_DBD PF18333.1 gi|21229245|ref|NP_635167.1| - 0.098 12.8 3.1 0.19 11.8 0.2 2.6 2 0 0 2 2 2 0 Non-canonical single-stranded DNA-binding domain TPR_21 PF09976.9 gi|21229245|ref|NP_635167.1| - 0.12 12.1 4.8 0.82 9.3 0.1 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat-like domain ANAPC3 PF12895.7 gi|21229245|ref|NP_635167.1| - 0.15 12.3 10.7 1.5 9.1 0.2 5.6 5 2 1 6 6 6 0 Anaphase-promoting complex, cyclosome, subunit 3 Peptidase_M13_N PF05649.13 gi|21229245|ref|NP_635167.1| - 0.19 11.4 0.1 0.19 11.4 0.1 2.0 2 1 1 3 3 3 0 Peptidase family M13 TPR_17 PF13431.6 gi|21229245|ref|NP_635167.1| - 0.19 12.2 10.6 20 5.8 0.0 5.6 7 0 0 7 7 5 0 Tetratricopeptide repeat BAR PF03114.18 gi|21229245|ref|NP_635167.1| - 0.23 11.1 8.8 0.24 11.0 0.1 3.6 3 1 0 3 3 3 0 BAR domain DUF4810 PF16068.5 gi|21229245|ref|NP_635167.1| - 0.24 12.0 4.3 13 6.4 0.1 3.8 4 0 0 4 4 4 0 Domain of unknown function (DUF4810) DUF384 PF04064.13 gi|21229245|ref|NP_635167.1| - 0.25 11.2 1.3 10 6.1 0.5 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF384) RPN7 PF10602.9 gi|21229245|ref|NP_635167.1| - 0.41 10.3 17.7 0.21 11.3 0.3 4.9 3 2 2 5 5 5 0 26S proteasome subunit RPN7 TPR_6 PF13174.6 gi|21229245|ref|NP_635167.1| - 3.4 8.5 12.5 9.4 7.1 0.9 5.2 6 0 0 6 6 5 0 Tetratricopeptide repeat DUF2225 PF09986.9 gi|21229245|ref|NP_635167.1| - 5.9 6.6 11.0 13 5.4 3.1 3.0 1 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2225) TPR_11 PF13414.6 gi|21229245|ref|NP_635167.1| - 8.9 6.1 17.2 16 5.2 0.2 5.5 6 0 0 6 6 5 0 TPR repeat Helicase_C_2 PF13307.6 gi|21229246|ref|NP_635168.1| - 3.1e-08 34.0 0.0 4e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain TPR_12 PF13424.6 gi|21229248|ref|NP_635170.1| - 3.6e-38 129.7 25.1 2.5e-06 27.7 0.2 12.8 11 2 0 11 11 11 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21229248|ref|NP_635170.1| - 8.2e-27 91.1 61.7 3.9e-05 23.5 0.2 14.6 15 0 0 15 15 14 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21229248|ref|NP_635170.1| - 1.3e-25 87.4 56.4 0.00084 19.3 0.3 15.1 16 0 0 16 16 14 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21229248|ref|NP_635170.1| - 4.9e-23 79.9 53.9 4.9e-05 23.0 0.2 14.7 15 2 2 17 17 17 6 Tetratricopeptide repeat TPR_10 PF13374.6 gi|21229248|ref|NP_635170.1| - 5e-19 67.5 16.2 4e-05 23.3 0.0 10.2 11 0 0 11 11 10 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|21229248|ref|NP_635170.1| - 2.4e-18 64.7 24.2 0.0016 18.3 0.1 12.7 15 0 0 15 15 13 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21229248|ref|NP_635170.1| - 1.1e-16 60.1 10.3 1.4 9.9 0.0 14.1 12 3 2 14 14 14 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|21229248|ref|NP_635170.1| - 4.7e-11 42.6 33.7 0.022 15.4 0.4 13.1 13 2 1 14 14 13 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21229248|ref|NP_635170.1| - 3.5e-10 40.3 19.0 1.1 9.8 0.1 11.9 10 4 3 13 13 12 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21229248|ref|NP_635170.1| - 1.4e-08 35.2 17.6 4.3 8.1 0.2 11.7 10 2 0 10 10 10 1 Tetratricopeptide repeat Sel1 PF08238.12 gi|21229248|ref|NP_635170.1| - 5.3e-07 30.1 11.0 0.59 10.9 0.1 6.4 6 0 0 6 6 6 1 Sel1 repeat TPR_17 PF13431.6 gi|21229248|ref|NP_635170.1| - 2.7e-06 27.4 25.4 2.2 8.9 0.0 12.3 13 2 2 15 15 11 1 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|21229248|ref|NP_635170.1| - 5.7e-06 25.9 0.0 4 6.7 0.0 4.7 4 1 0 4 4 4 2 MalT-like TPR region TAtT PF16811.5 gi|21229248|ref|NP_635170.1| - 7e-06 25.5 10.8 0.08 12.2 0.0 6.2 3 2 3 6 6 6 1 TRAP transporter T-component TOM20_plant PF06552.12 gi|21229248|ref|NP_635170.1| - 9.9e-05 22.2 18.3 0.32 10.7 0.7 6.6 4 3 3 7 7 7 3 Plant specific mitochondrial import receptor subunit TOM20 TPR_21 PF09976.9 gi|21229248|ref|NP_635170.1| - 0.0014 18.4 7.9 0.45 10.2 0.2 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat-like domain TPR_11 PF13414.6 gi|21229248|ref|NP_635170.1| - 0.0029 17.3 50.5 0.12 12.1 0.9 12.1 12 2 0 12 12 11 2 TPR repeat YfdX PF10938.8 gi|21229248|ref|NP_635170.1| - 0.014 15.3 5.0 28 4.6 0.0 4.8 5 0 0 5 5 5 0 YfdX protein TPR_9 PF13371.6 gi|21229248|ref|NP_635170.1| - 0.015 15.5 1.0 85 3.4 0.0 5.9 6 1 1 7 7 5 0 Tetratricopeptide repeat TPR_5 PF12688.7 gi|21229248|ref|NP_635170.1| - 0.028 14.7 0.0 30 4.9 0.0 3.9 4 0 0 4 4 3 0 Tetratrico peptide repeat DUF2225 PF09986.9 gi|21229248|ref|NP_635170.1| - 0.063 13.0 26.6 1.2 8.8 0.2 6.5 4 2 2 6 6 6 0 Uncharacterized protein conserved in bacteria (DUF2225) SRP68 PF16969.5 gi|21229248|ref|NP_635170.1| - 0.19 10.7 3.9 2.5 7.0 0.1 3.7 4 0 0 4 4 4 0 RNA-binding signal recognition particle 68 Mad3_BUB1_I PF08311.12 gi|21229248|ref|NP_635170.1| - 0.25 11.3 12.0 0.083 12.9 0.8 4.8 4 2 1 5 5 4 0 Mad3/BUB1 homology region 1 HTH_Bact PF18768.1 gi|21229248|ref|NP_635170.1| - 0.27 10.9 5.6 0.96 9.1 0.1 3.6 2 1 0 2 2 2 0 Helix-turn-helix bacterial domain MIT PF04212.18 gi|21229248|ref|NP_635170.1| - 1.8 8.7 22.5 2.3 8.3 0.0 7.3 7 0 0 7 7 7 0 MIT (microtubule interacting and transport) domain RPN7 PF10602.9 gi|21229248|ref|NP_635170.1| - 1.8 8.2 11.7 0.41 10.3 0.3 4.7 3 1 2 5 5 5 0 26S proteasome subunit RPN7 ANAPC3 PF12895.7 gi|21229248|ref|NP_635170.1| - 5.1 7.4 11.9 12 6.2 0.7 5.8 4 2 2 6 6 5 0 Anaphase-promoting complex, cyclosome, subunit 3 N6_Mtase PF02384.16 gi|21229249|ref|NP_635171.1| - 1.2e-66 225.1 0.0 2e-66 224.4 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|21229249|ref|NP_635171.1| - 7.5e-17 62.2 0.6 1.9e-16 60.9 0.1 2.0 2 1 0 2 2 2 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|21229249|ref|NP_635171.1| - 2.1e-08 34.1 0.0 3.3e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.6 gi|21229249|ref|NP_635171.1| - 0.00031 20.6 0.0 0.14 12.0 0.0 2.4 2 0 0 2 2 2 2 Methyltransferase domain MTS PF05175.14 gi|21229249|ref|NP_635171.1| - 0.053 13.1 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Eco57I PF07669.11 gi|21229249|ref|NP_635171.1| - 0.13 12.8 0.0 0.31 11.6 0.0 1.6 1 0 0 1 1 1 0 Eco57I restriction-modification methylase Exo_endo_phos PF03372.23 gi|21229250|ref|NP_635172.1| - 1.1e-23 84.0 0.0 1.3e-23 83.7 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|21229250|ref|NP_635172.1| - 5.2e-05 23.1 0.0 0.00054 19.8 0.0 2.3 2 1 0 2 2 2 1 Endonuclease-reverse transcriptase Cupin_2 PF07883.11 gi|21229251|ref|NP_635173.1| - 4.1e-12 45.6 0.0 6.7e-12 45.0 0.0 1.4 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|21229251|ref|NP_635173.1| - 3.8e-06 26.6 0.0 1.4e-05 24.8 0.0 1.7 1 1 0 1 1 1 1 Cupin MannoseP_isomer PF01050.18 gi|21229251|ref|NP_635173.1| - 0.0001 22.2 0.0 0.00016 21.6 0.0 1.2 1 1 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 gi|21229251|ref|NP_635173.1| - 0.00042 20.2 0.0 0.00054 19.9 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain EutQ PF06249.12 gi|21229251|ref|NP_635173.1| - 0.0019 18.0 0.0 0.0022 17.7 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.12 gi|21229251|ref|NP_635173.1| - 0.0093 15.6 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Met_10 PF02475.16 gi|21229252|ref|NP_635174.1| - 8.3e-66 221.5 0.0 1.3e-65 220.9 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|21229252|ref|NP_635174.1| - 3.2e-09 36.5 0.7 2.5e-08 33.7 0.4 2.6 2 0 0 2 2 2 1 tRNA methyltransferase 5 N-terminal domain Methyltransf_15 PF09445.10 gi|21229252|ref|NP_635174.1| - 4.4e-06 26.4 0.0 8.3e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.14 gi|21229252|ref|NP_635174.1| - 6.5e-06 25.8 0.0 1.3e-05 24.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|21229252|ref|NP_635174.1| - 9.8e-05 22.3 0.0 0.00019 21.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TRM PF02005.16 gi|21229252|ref|NP_635174.1| - 0.00031 20.0 0.0 0.00038 19.8 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_25 PF13649.6 gi|21229252|ref|NP_635174.1| - 0.00059 20.5 0.0 0.0012 19.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|21229252|ref|NP_635174.1| - 0.0027 17.1 0.0 0.0055 16.1 0.0 1.5 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PrmA PF06325.13 gi|21229252|ref|NP_635174.1| - 0.012 15.0 0.0 0.019 14.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.15 gi|21229252|ref|NP_635174.1| - 0.08 12.6 0.0 0.19 11.4 0.0 1.5 1 1 0 1 1 1 0 Conserved hypothetical protein 95 tRNA_U5-meth_tr PF05958.11 gi|21229252|ref|NP_635174.1| - 0.19 10.7 0.0 0.28 10.1 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Bap31 PF05529.12 gi|21229253|ref|NP_635175.1| - 0.066 13.1 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region UbiA PF01040.18 gi|21229256|ref|NP_635178.1| - 0.015 14.6 0.1 0.02 14.2 0.1 1.1 1 0 0 1 1 1 0 UbiA prenyltransferase family Cpta_toxin PF07254.12 gi|21229256|ref|NP_635178.1| - 0.065 13.2 1.1 0.1 12.6 1.1 1.3 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system DUF4410 PF14366.6 gi|21229256|ref|NP_635178.1| - 0.15 11.9 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4410) CMD PF02627.20 gi|21229257|ref|NP_635179.1| - 9.5e-11 41.6 0.0 1.2e-10 41.3 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Aldo_ket_red PF00248.21 gi|21229258|ref|NP_635180.1| - 1e-40 139.8 0.1 2.7e-39 135.1 0.1 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|21229258|ref|NP_635180.1| - 9.5e-12 45.3 7.0 2.2e-11 44.1 7.0 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229258|ref|NP_635180.1| - 3.7e-10 39.8 5.7 8.6e-10 38.6 5.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21229258|ref|NP_635180.1| - 4e-09 36.7 0.5 0.00013 22.2 0.2 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21229258|ref|NP_635180.1| - 4.6e-07 30.2 4.9 1.1e-06 29.0 4.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21229258|ref|NP_635180.1| - 8.7e-05 22.6 22.7 0.0012 19.0 11.8 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21229258|ref|NP_635180.1| - 0.00025 20.7 12.8 0.00041 20.0 5.0 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21229258|ref|NP_635180.1| - 0.0013 19.3 11.6 0.01 16.4 11.9 2.3 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21229258|ref|NP_635180.1| - 0.0054 16.8 3.7 0.0054 16.8 3.7 2.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21229258|ref|NP_635180.1| - 0.013 15.5 1.8 0.013 15.5 1.8 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21229258|ref|NP_635180.1| - 0.023 15.6 3.7 0.023 15.6 3.7 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|21229258|ref|NP_635180.1| - 0.024 14.4 2.2 0.024 14.4 2.2 2.5 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_4 PF12800.7 gi|21229258|ref|NP_635180.1| - 0.027 15.0 4.2 0.027 15.0 4.2 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21229258|ref|NP_635180.1| - 0.041 14.0 8.0 0.25 11.5 1.4 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21229258|ref|NP_635180.1| - 2 9.4 15.9 0.2 12.6 4.2 2.7 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Beta-lactamase PF00144.24 gi|21229259|ref|NP_635181.1| - 1.8e-31 109.6 0.0 2.9e-31 109.0 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase HATPase_c_3 PF13589.6 gi|21229260|ref|NP_635182.1| - 2e-06 27.7 0.0 4.8e-06 26.4 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|21229260|ref|NP_635182.1| - 2.2e-05 24.9 0.1 6.4e-05 23.4 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HD PF01966.22 gi|21229260|ref|NP_635182.1| - 0.00054 20.2 1.3 0.0035 17.6 0.1 2.5 1 1 0 2 2 2 1 HD domain PDEase_I PF00233.19 gi|21229260|ref|NP_635182.1| - 0.0042 16.9 0.1 0.014 15.2 0.1 1.8 1 1 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase PMC2NT PF08066.12 gi|21229260|ref|NP_635182.1| - 0.021 15.5 0.7 0.35 11.6 0.1 2.8 2 1 0 2 2 2 0 PMC2NT (NUC016) domain DDE_Tnp_IS66 PF03050.14 gi|21229262|ref|NP_635184.1| - 2.5e-73 247.0 0.0 2.9e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21229262|ref|NP_635184.1| - 4.8e-10 39.7 6.7 1.3e-09 38.2 6.7 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21229262|ref|NP_635184.1| - 0.00015 22.0 1.1 0.62 10.3 0.0 3.0 2 1 1 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|21229262|ref|NP_635184.1| - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) zf-RING_5 PF14634.6 gi|21229262|ref|NP_635184.1| - 0.34 10.9 7.9 1 9.4 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21229262|ref|NP_635184.1| - 1.2 10.0 7.5 0.17 12.6 2.9 2.0 2 0 0 2 2 2 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|21229262|ref|NP_635184.1| - 1.3 9.7 5.2 31 5.3 0.5 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DASH_Spc19 PF08287.11 gi|21229263|ref|NP_635185.1| - 0.025 14.5 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Spc19 SlyX PF04102.12 gi|21229263|ref|NP_635185.1| - 0.036 14.7 0.1 0.054 14.1 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.11 gi|21229263|ref|NP_635185.1| - 0.22 11.3 0.4 0.22 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) Crl PF07417.12 gi|21229264|ref|NP_635186.1| - 0.13 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Sigma factor-binding transcriptional regulator Crl 2C_adapt PF08793.10 gi|21229265|ref|NP_635187.1| - 0.015 15.5 0.0 0.028 14.6 0.0 1.5 1 0 0 1 1 1 0 2-cysteine adaptor domain DUF1638 PF07796.11 gi|21229266|ref|NP_635188.1| - 2e-32 112.5 0.1 2.6e-32 112.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) Closter_coat PF01785.17 gi|21229266|ref|NP_635188.1| - 0.082 12.2 0.0 0.15 11.3 0.0 1.4 1 0 0 1 1 1 0 Closterovirus coat protein zf-CSL PF05207.13 gi|21229266|ref|NP_635188.1| - 1.2 8.9 3.9 1.1 9.1 1.3 2.1 1 1 1 2 2 2 0 CSL zinc finger EZH2_WD-Binding PF11616.8 gi|21229268|ref|NP_635190.1| - 0.11 12.6 0.2 0.3 11.2 0.2 1.8 1 0 0 1 1 1 0 WD repeat binding protein EZH2 DDE_Tnp_1 PF01609.21 gi|21229269|ref|NP_635191.1| - 3.3e-10 40.0 2.4 7.1e-10 38.9 2.4 1.5 1 1 0 1 1 1 1 Transposase DDE domain Tn7_Tnp_TnsA_N PF08722.11 gi|21229269|ref|NP_635191.1| - 0.46 10.7 3.3 16 5.8 0.0 2.8 2 1 0 2 2 2 0 TnsA endonuclease N terminal PKD PF00801.20 gi|21229270|ref|NP_635192.1| - 4.4e-36 122.6 12.6 1.7e-11 43.8 0.6 3.4 3 0 0 3 3 3 3 PKD domain ChitinaseA_N PF08329.10 gi|21229270|ref|NP_635192.1| - 1.9e-08 34.0 1.0 0.077 12.6 0.0 3.2 2 1 1 3 3 3 3 Chitinase A, N-terminal domain ETF_QO PF05187.13 gi|21229270|ref|NP_635192.1| - 9.1e-06 25.8 0.0 2.5 8.3 0.0 3.4 3 0 0 3 3 3 3 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S V-set_CD47 PF08204.11 gi|21229270|ref|NP_635192.1| - 0.0017 18.3 0.0 11 5.9 0.0 3.5 3 0 0 3 3 3 2 CD47 immunoglobulin-like domain SEP PF08059.13 gi|21229270|ref|NP_635192.1| - 0.0019 18.7 0.0 0.43 11.2 0.0 4.0 3 2 0 3 3 3 1 SEP domain TAF8_C PF10406.9 gi|21229270|ref|NP_635192.1| - 0.17 12.5 2.8 51 4.5 0.1 3.8 3 0 0 3 3 3 0 Transcription factor TFIID complex subunit 8 C-term PKD PF00801.20 gi|21229271|ref|NP_635193.1| - 2.6e-12 46.4 0.8 4.8e-12 45.6 0.8 1.5 1 0 0 1 1 1 1 PKD domain V-set_CD47 PF08204.11 gi|21229271|ref|NP_635193.1| - 0.016 15.2 0.0 2.1 8.3 0.0 2.2 2 0 0 2 2 2 0 CD47 immunoglobulin-like domain ChitinaseA_N PF08329.10 gi|21229271|ref|NP_635193.1| - 0.045 13.4 0.0 0.064 12.9 0.0 1.3 1 0 0 1 1 1 0 Chitinase A, N-terminal domain GyrI-like PF06445.15 gi|21229272|ref|NP_635194.1| - 5.3e-25 88.5 0.1 7.3e-25 88.1 0.1 1.2 1 0 0 1 1 1 1 GyrI-like small molecule binding domain MerR_1 PF13411.6 gi|21229272|ref|NP_635194.1| - 1.8e-09 37.5 0.0 3.3e-09 36.7 0.0 1.5 1 0 0 1 1 1 1 MerR HTH family regulatory protein Cass2 PF14526.6 gi|21229272|ref|NP_635194.1| - 3.7e-07 30.4 0.0 6.8e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Integron-associated effector binding protein MerR PF00376.23 gi|21229272|ref|NP_635194.1| - 1.2e-06 28.2 0.0 2.2e-06 27.3 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR-DNA-bind PF09278.11 gi|21229272|ref|NP_635194.1| - 0.016 15.8 0.1 0.03 14.9 0.1 1.5 1 0 0 1 1 1 0 MerR, DNA binding PKD PF00801.20 gi|21229273|ref|NP_635195.1| - 2.6e-11 43.2 0.3 2.6e-11 43.2 0.3 3.1 3 0 0 3 3 3 1 PKD domain baeRF_family8 PF18851.1 gi|21229273|ref|NP_635195.1| - 0.3 11.2 1.5 15 5.6 0.0 3.1 3 1 0 3 3 3 0 Bacterial archaeo-eukaryotic release factor family 8 DUF2523 PF10734.9 gi|21229273|ref|NP_635195.1| - 1.6 9.4 4.3 60 4.3 0.1 3.8 1 1 4 5 5 5 0 Protein of unknown function (DUF2523) NAS PF03059.16 gi|21229274|ref|NP_635196.1| - 5.8e-44 150.5 0.0 7.2e-44 150.2 0.0 1.1 1 0 0 1 1 1 1 Nicotianamine synthase protein HTH_5 PF01022.20 gi|21229275|ref|NP_635197.1| - 5e-14 51.9 0.3 8.4e-14 51.2 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21229275|ref|NP_635197.1| - 7.9e-13 48.3 0.5 1.3e-12 47.6 0.5 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|21229275|ref|NP_635197.1| - 8.5e-07 28.8 0.2 1.3e-06 28.2 0.2 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|21229275|ref|NP_635197.1| - 3.1e-06 27.1 0.5 4.7e-05 23.3 0.5 2.1 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|21229275|ref|NP_635197.1| - 3.2e-06 26.6 0.2 7.9e-06 25.3 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|21229275|ref|NP_635197.1| - 3.8e-06 26.7 0.2 4.9e-06 26.3 0.2 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|21229275|ref|NP_635197.1| - 1.2e-05 25.1 0.0 2e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|21229275|ref|NP_635197.1| - 3.1e-05 23.8 0.2 6.2e-05 22.9 0.2 1.5 1 0 0 1 1 1 1 HTH domain HTH_26 PF13443.6 gi|21229275|ref|NP_635197.1| - 0.00099 19.5 0.1 0.18 12.3 0.0 2.3 1 1 1 2 2 2 1 Cro/C1-type HTH DNA-binding domain Rrf2 PF02082.20 gi|21229275|ref|NP_635197.1| - 0.0023 18.2 0.1 0.0037 17.6 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_34 PF13601.6 gi|21229275|ref|NP_635197.1| - 0.0058 16.8 0.2 0.0081 16.3 0.2 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|21229275|ref|NP_635197.1| - 0.0075 16.2 0.1 0.019 14.9 0.0 1.8 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain HTH_29 PF13551.6 gi|21229275|ref|NP_635197.1| - 0.041 13.9 0.0 0.072 13.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix LexA_DNA_bind PF01726.16 gi|21229275|ref|NP_635197.1| - 0.044 13.6 0.0 0.08 12.7 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain HxlR PF01638.17 gi|21229275|ref|NP_635197.1| - 0.064 13.1 0.2 0.083 12.7 0.2 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_41 PF14502.6 gi|21229275|ref|NP_635197.1| - 0.072 12.8 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|21229275|ref|NP_635197.1| - 0.074 13.3 0.1 0.17 12.1 0.1 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.21 gi|21229275|ref|NP_635197.1| - 0.1 12.3 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF4577 PF15145.6 gi|21229276|ref|NP_635198.1| - 0.0057 16.7 0.1 0.0063 16.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4577) TssO PF17561.2 gi|21229276|ref|NP_635198.1| - 0.0081 16.3 3.4 0.021 14.9 3.4 1.6 1 1 0 1 1 1 1 Type VI secretion system, TssO DUF2973 PF11189.8 gi|21229276|ref|NP_635198.1| - 0.1 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) KxDL PF10241.9 gi|21229276|ref|NP_635198.1| - 0.12 12.7 0.3 0.14 12.5 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein Phosphodiest PF01663.22 gi|21229279|ref|NP_635201.1| - 5.1e-15 55.9 0.1 5.8e-14 52.4 0.1 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|21229279|ref|NP_635201.1| - 6.8e-11 42.1 0.0 4.1e-10 39.6 0.0 2.3 2 1 0 2 2 2 1 Sulfatase Metalloenzyme PF01676.18 gi|21229279|ref|NP_635201.1| - 2.7e-09 36.8 0.1 9.7e-09 34.9 0.1 1.8 1 1 0 1 1 1 1 Metalloenzyme superfamily PglZ PF08665.12 gi|21229279|ref|NP_635201.1| - 0.0033 17.5 0.0 0.18 11.9 0.0 2.2 1 1 0 1 1 1 1 PglZ domain Tox-HDC PF15656.6 gi|21229279|ref|NP_635201.1| - 0.07 13.3 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Toxin with a H, D/N and C signature NAD_binding_1 PF00175.21 gi|21229279|ref|NP_635201.1| - 0.087 13.5 0.0 0.17 12.5 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase NAD-binding domain NosD PF05048.13 gi|21229280|ref|NP_635202.1| - 2.3e-31 108.9 20.2 2.3e-31 108.9 20.2 1.8 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|21229280|ref|NP_635202.1| - 7.5e-15 54.5 0.0 5.3e-06 26.2 0.0 2.4 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.6 gi|21229280|ref|NP_635202.1| - 1.7e-09 37.7 17.5 4.8e-09 36.3 17.5 1.8 1 0 0 1 1 1 1 Right handed beta helix region Cupin_2 PF07883.11 gi|21229281|ref|NP_635203.1| - 5.3e-15 54.9 0.1 2.3e-14 52.9 0.0 2.0 1 1 1 2 2 2 1 Cupin domain HTH_19 PF12844.7 gi|21229281|ref|NP_635203.1| - 7.3e-10 38.7 0.1 1.4e-09 37.9 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|21229281|ref|NP_635203.1| - 8.1e-08 32.2 0.1 1.5e-07 31.4 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|21229281|ref|NP_635203.1| - 3.1e-06 27.4 0.0 4.7e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_3 PF05899.12 gi|21229281|ref|NP_635203.1| - 0.0031 17.2 0.0 0.0052 16.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) MannoseP_isomer PF01050.18 gi|21229281|ref|NP_635203.1| - 0.0042 17.0 0.0 0.0084 16.0 0.0 1.6 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 gi|21229281|ref|NP_635203.1| - 0.0073 16.2 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain CENP-C_C PF11699.8 gi|21229281|ref|NP_635203.1| - 0.011 16.0 0.1 0.022 15.0 0.0 1.6 1 1 0 1 1 1 0 Mif2/CENP-C like EutQ PF06249.12 gi|21229281|ref|NP_635203.1| - 0.049 13.4 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ CpxA_peri PF16527.5 gi|21229281|ref|NP_635203.1| - 0.054 13.9 0.0 0.16 12.4 0.1 1.7 2 0 0 2 2 2 0 Two-component sensor protein CpxA, periplasmic domain AMP-binding PF00501.28 gi|21229282|ref|NP_635204.1| - 1.5e-74 251.2 0.0 1.7e-74 250.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|21229282|ref|NP_635204.1| - 2e-23 83.2 0.3 4.4e-23 82.1 0.3 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Fer4_7 PF12838.7 gi|21229283|ref|NP_635205.1| - 1.2e-09 38.6 7.9 1.6e-09 38.2 7.9 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21229283|ref|NP_635205.1| - 5.6e-07 29.6 5.4 9.1e-07 28.9 5.4 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229283|ref|NP_635205.1| - 8e-07 29.1 19.6 5.4e-05 23.3 10.5 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21229283|ref|NP_635205.1| - 1.5e-06 27.9 10.4 0.0025 17.8 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21229283|ref|NP_635205.1| - 3.3e-06 27.5 6.2 0.016 15.7 0.8 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21229283|ref|NP_635205.1| - 5.2e-06 26.6 7.9 0.0074 16.7 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21229283|ref|NP_635205.1| - 9.7e-06 25.6 8.9 2.9e-05 24.1 9.1 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|21229283|ref|NP_635205.1| - 1.3e-05 24.8 13.1 0.00015 21.4 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21229283|ref|NP_635205.1| - 0.00016 21.6 11.3 0.011 15.7 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21229283|ref|NP_635205.1| - 0.00024 21.9 4.3 0.19 12.6 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21229283|ref|NP_635205.1| - 0.00031 21.2 6.1 0.053 14.1 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 gi|21229283|ref|NP_635205.1| - 0.0004 21.3 11.2 0.0039 18.1 0.9 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|21229283|ref|NP_635205.1| - 0.0067 16.8 11.6 0.23 11.9 12.0 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21229283|ref|NP_635205.1| - 0.046 14.7 15.8 0.17 12.9 4.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|21229283|ref|NP_635205.1| - 0.44 11.3 8.1 3.4 8.5 0.7 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|21229283|ref|NP_635205.1| - 1.9 8.7 6.7 5.5 7.2 1.2 2.1 1 1 2 3 3 3 0 4Fe-4S dicluster domain POR_N PF01855.19 gi|21229284|ref|NP_635206.1| - 1e-51 175.9 0.0 1.3e-51 175.6 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|21229284|ref|NP_635206.1| - 2.2e-26 92.1 0.0 4e-26 91.3 0.0 1.4 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|21229284|ref|NP_635206.1| - 8.7e-05 22.2 0.1 0.00015 21.5 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.20 gi|21229284|ref|NP_635206.1| - 0.0001 22.2 0.0 0.00017 21.4 0.0 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain POR PF01558.18 gi|21229285|ref|NP_635207.1| - 5.3e-36 124.3 0.2 9.6e-36 123.5 0.2 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|21229285|ref|NP_635207.1| - 4.2e-24 85.1 0.1 6.7e-24 84.4 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Orn_Arg_deC_N PF02784.16 gi|21229287|ref|NP_635209.1| - 8.8e-53 179.2 0.0 1.1e-52 178.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|21229287|ref|NP_635209.1| - 8.3e-09 35.6 0.0 1e-08 35.3 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AA_permease_2 PF13520.6 gi|21229288|ref|NP_635210.1| - 2.1e-40 138.9 45.9 3.4e-40 138.2 46.0 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|21229288|ref|NP_635210.1| - 1.3e-29 103.2 47.9 3.8e-29 101.6 47.9 1.6 1 1 0 1 1 1 1 Amino acid permease Lactamase_B PF00753.27 gi|21229289|ref|NP_635211.1| - 8.7e-09 35.7 0.0 2.3e-08 34.3 0.0 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.25 gi|21229289|ref|NP_635211.1| - 4.2e-05 23.8 0.0 0.00011 22.4 0.0 1.8 2 0 0 2 2 2 1 Flavodoxin Lactamase_B_2 PF12706.7 gi|21229289|ref|NP_635211.1| - 0.0033 17.0 0.0 0.0058 16.2 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Flavodoxin_5 PF12724.7 gi|21229289|ref|NP_635211.1| - 0.0053 17.0 0.0 0.0087 16.3 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain UPF0261 PF06792.11 gi|21229289|ref|NP_635211.1| - 0.034 13.1 0.0 0.055 12.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0261) Lactamase_B_3 PF13483.6 gi|21229289|ref|NP_635211.1| - 0.055 13.3 0.0 0.14 12.1 0.0 1.6 2 0 0 2 2 2 0 Beta-lactamase superfamily domain Phage_Arf PF17585.2 gi|21229289|ref|NP_635211.1| - 0.11 12.5 0.1 0.22 11.5 0.1 1.5 1 0 0 1 1 1 0 Accessory recombination function protein Gln-synt_C PF00120.24 gi|21229290|ref|NP_635212.1| - 1.5e-51 175.5 0.0 1.5e-50 172.2 0.0 2.0 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|21229290|ref|NP_635212.1| - 5.9e-12 45.1 0.0 1.3e-11 44.1 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Glycolipid_bind PF06475.11 gi|21229290|ref|NP_635212.1| - 0.014 14.9 0.0 0.025 14.1 0.0 1.5 1 0 0 1 1 1 0 Putative glycolipid-binding Ion_trans PF00520.31 gi|21229291|ref|NP_635213.1| - 8.2e-32 110.4 12.7 1e-31 110.0 12.7 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 gi|21229291|ref|NP_635213.1| - 1.1e-14 54.1 7.6 1.1e-14 54.1 7.6 2.4 2 0 0 2 2 2 1 Ion channel DZR PF12773.7 gi|21229291|ref|NP_635213.1| - 0.0069 16.4 2.3 0.012 15.6 2.3 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|21229291|ref|NP_635213.1| - 0.02 14.6 3.2 0.036 13.8 3.2 1.4 1 0 0 1 1 1 0 zinc-ribbon domain NRDD PF13597.6 gi|21229291|ref|NP_635213.1| - 0.14 10.9 0.4 0.18 10.5 0.4 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase preSET_CXC PF18264.1 gi|21229291|ref|NP_635213.1| - 0.25 11.9 1.5 0.37 11.3 1.5 1.2 1 0 0 1 1 1 0 CXC domain zf-CCHC_3 PF13917.6 gi|21229291|ref|NP_635213.1| - 0.69 9.9 6.8 0.5 10.4 0.6 2.2 1 1 1 2 2 2 0 Zinc knuckle tRNA_deacylase PF04414.12 gi|21229292|ref|NP_635214.1| - 9.5e-72 240.8 0.1 1.2e-71 240.5 0.1 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase DUF3147 PF11345.8 gi|21229293|ref|NP_635215.1| - 5.7e-39 132.9 5.7 6.5e-39 132.7 5.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) DUF3147 PF11345.8 gi|21229294|ref|NP_635216.1| - 1.8e-23 83.0 10.0 2.1e-23 82.8 10.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) PrgI PF12666.7 gi|21229294|ref|NP_635216.1| - 1.9 9.3 7.3 12 6.7 1.9 2.1 1 1 1 2 2 2 0 PrgI family protein Desulfoferrod_N PF06397.12 gi|21229295|ref|NP_635217.1| - 0.51 10.0 19.9 0.23 11.1 3.6 2.6 1 1 1 2 2 2 0 Desulfoferrodoxin, N-terminal domain MatE PF01554.18 gi|21229296|ref|NP_635218.1| - 1.2e-59 200.6 38.9 2.1e-34 118.5 13.5 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|21229296|ref|NP_635218.1| - 6.8e-10 39.2 41.4 1.6e-08 34.7 17.5 4.1 3 2 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain Polysacc_synt PF01943.17 gi|21229296|ref|NP_635218.1| - 0.0054 16.2 32.9 0.27 10.6 0.8 3.4 1 1 1 3 3 3 3 Polysaccharide biosynthesis protein MarR PF01047.22 gi|21229297|ref|NP_635219.1| - 5.5e-16 58.3 0.0 9e-15 54.4 0.0 2.1 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|21229297|ref|NP_635219.1| - 1.8e-12 47.0 0.0 2.8e-12 46.3 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|21229297|ref|NP_635219.1| - 4.3e-08 33.5 0.3 7.8e-08 32.7 0.1 1.5 2 0 0 2 2 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|21229297|ref|NP_635219.1| - 5.4e-08 32.3 0.1 2e-07 30.4 0.1 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|21229297|ref|NP_635219.1| - 5.1e-06 26.6 0.2 1.2e-05 25.4 0.1 1.7 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|21229297|ref|NP_635219.1| - 5.7e-06 26.1 0.3 1.6e-05 24.7 0.3 1.7 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|21229297|ref|NP_635219.1| - 1.6e-05 24.7 0.7 2.1e-05 24.3 0.7 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_36 PF13730.6 gi|21229297|ref|NP_635219.1| - 3.9e-05 23.5 0.3 8.7e-05 22.4 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|21229297|ref|NP_635219.1| - 5.5e-05 23.3 0.3 8.2e-05 22.7 0.3 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|21229297|ref|NP_635219.1| - 6.4e-05 22.8 0.1 0.00011 22.1 0.1 1.4 1 0 0 1 1 1 1 HTH domain B-block_TFIIIC PF04182.12 gi|21229297|ref|NP_635219.1| - 0.0001 22.4 0.1 0.00022 21.3 0.1 1.6 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_54 PF18607.1 gi|21229297|ref|NP_635219.1| - 0.0002 21.4 0.2 0.00037 20.5 0.2 1.4 1 0 0 1 1 1 1 ParA helix turn helix domain HTH_Crp_2 PF13545.6 gi|21229297|ref|NP_635219.1| - 0.00033 20.6 0.1 0.00083 19.3 0.1 1.6 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain ANT PF03374.14 gi|21229297|ref|NP_635219.1| - 0.00035 20.8 0.1 0.00075 19.8 0.1 1.6 1 0 0 1 1 1 1 Phage antirepressor protein KilAC domain RPA_C PF08784.11 gi|21229297|ref|NP_635219.1| - 0.00057 20.5 0.0 0.001 19.7 0.0 1.4 1 0 0 1 1 1 1 Replication protein A C terminal HxlR PF01638.17 gi|21229297|ref|NP_635219.1| - 0.0024 17.7 0.0 0.0052 16.6 0.0 1.5 2 0 0 2 2 2 1 HxlR-like helix-turn-helix DUF3116 PF11313.8 gi|21229297|ref|NP_635219.1| - 0.0027 17.5 0.2 0.0045 16.8 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3116) GntR PF00392.21 gi|21229297|ref|NP_635219.1| - 0.0047 16.6 0.0 0.0077 15.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.10 gi|21229297|ref|NP_635219.1| - 0.0093 15.8 0.0 0.014 15.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF4065 PF13274.6 gi|21229297|ref|NP_635219.1| - 0.016 16.1 0.5 0.026 15.4 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4065) FUR PF01475.19 gi|21229297|ref|NP_635219.1| - 0.026 14.7 0.2 0.042 14.0 0.2 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family Mga PF05043.13 gi|21229297|ref|NP_635219.1| - 0.062 13.9 0.1 0.17 12.4 0.1 1.8 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_23 PF13384.6 gi|21229297|ref|NP_635219.1| - 0.071 12.9 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain DUF1495 PF07381.11 gi|21229297|ref|NP_635219.1| - 0.088 12.6 0.1 0.15 11.9 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) HTH_DeoR PF08220.12 gi|21229297|ref|NP_635219.1| - 0.089 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Rrf2 PF02082.20 gi|21229297|ref|NP_635219.1| - 0.091 13.1 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR PF03551.14 gi|21229297|ref|NP_635219.1| - 0.11 12.5 1.0 0.15 12.1 0.3 1.6 2 0 0 2 2 1 0 Transcriptional regulator PadR-like family HTH_20 PF12840.7 gi|21229297|ref|NP_635219.1| - 0.11 12.5 0.0 0.24 11.5 0.0 1.5 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|21229297|ref|NP_635219.1| - 0.13 12.3 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix DUF2157 PF09925.9 gi|21229298|ref|NP_635220.1| - 8.7e-06 25.6 0.6 1.8e-05 24.5 0.1 1.8 1 1 0 1 1 1 1 Predicted membrane protein (DUF2157) Peptidase_S9 PF00326.21 gi|21229300|ref|NP_635222.1| - 2e-15 56.8 0.0 5.1e-09 35.9 0.0 2.2 1 1 1 2 2 2 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|21229300|ref|NP_635222.1| - 3.7e-13 49.3 0.0 7.3e-10 38.5 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 BAAT_C PF08840.11 gi|21229300|ref|NP_635222.1| - 1.3e-11 44.8 0.0 1.1e-07 32.0 0.0 2.2 1 1 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S15 PF02129.18 gi|21229300|ref|NP_635222.1| - 1.4e-11 44.5 0.0 2.3e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_6 PF12697.7 gi|21229300|ref|NP_635222.1| - 1.8e-10 41.8 0.0 2.3e-10 41.5 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 gi|21229300|ref|NP_635222.1| - 7.3e-08 32.2 0.0 0.0059 16.2 0.0 2.4 2 0 0 2 2 2 2 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 gi|21229300|ref|NP_635222.1| - 2.7e-06 27.2 0.0 4.2e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 gi|21229300|ref|NP_635222.1| - 9.1e-05 22.4 0.0 0.00073 19.4 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 gi|21229300|ref|NP_635222.1| - 0.00041 19.1 0.0 0.17 10.6 0.0 2.2 1 1 1 2 2 2 2 Acetyl xylan esterase (AXE1) DUF1100 PF06500.11 gi|21229300|ref|NP_635222.1| - 0.0019 17.1 0.0 0.0042 15.9 0.0 1.5 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF1100) PGAP1 PF07819.13 gi|21229300|ref|NP_635222.1| - 0.0082 15.9 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 PGAP1-like protein Acyl_transf_2 PF02273.15 gi|21229300|ref|NP_635222.1| - 0.012 14.9 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Acyl transferase FSH1 PF03959.13 gi|21229300|ref|NP_635222.1| - 0.033 13.9 0.0 0.3 10.7 0.0 2.1 1 1 0 1 1 1 0 Serine hydrolase (FSH1) DUF2974 PF11187.8 gi|21229300|ref|NP_635222.1| - 0.06 12.9 0.0 0.092 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) PCRF PF03462.18 gi|21229300|ref|NP_635222.1| - 0.12 12.2 0.8 0.2 11.5 0.8 1.3 1 0 0 1 1 1 0 PCRF domain DUF3048_C PF17479.2 gi|21229300|ref|NP_635222.1| - 0.12 12.7 0.1 0.41 11.0 0.0 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain EamA PF00892.20 gi|21229301|ref|NP_635223.1| - 1.9e-23 83.1 37.9 8.1e-14 52.0 11.6 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|21229301|ref|NP_635223.1| - 0.0014 18.0 4.6 0.002 17.6 4.6 1.4 1 1 0 1 1 1 1 Triose-phosphate Transporter family GA-like PF17573.2 gi|21229302|ref|NP_635224.1| - 0.35 10.8 6.6 8 6.5 1.0 2.7 1 1 1 2 2 2 0 GA-like domain DUF515 PF04415.12 gi|21229302|ref|NP_635224.1| - 1.2 7.4 11.6 8 4.7 11.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF515) GATase PF00117.28 gi|21229303|ref|NP_635225.1| - 1.3e-23 83.7 0.0 2.6e-23 82.8 0.0 1.4 1 1 1 2 2 2 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|21229303|ref|NP_635225.1| - 1.6e-06 27.9 0.0 1.9e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 gi|21229303|ref|NP_635225.1| - 7.2e-06 25.9 0.7 3.3e-05 23.7 0.7 1.9 1 1 0 1 1 1 1 Peptidase C26 HTS PF04204.16 gi|21229303|ref|NP_635225.1| - 2.1e-05 23.6 0.0 3e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Homoserine O-succinyltransferase DJ-1_PfpI PF01965.24 gi|21229303|ref|NP_635225.1| - 0.00034 20.4 0.0 0.00051 19.9 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4373 PF14297.6 gi|21229303|ref|NP_635225.1| - 0.14 13.0 0.0 0.24 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4373) DUF2156 PF09924.9 gi|21229304|ref|NP_635226.1| - 2.2e-89 299.4 0.0 3e-89 299.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2156) LPG_synthase_TM PF03706.13 gi|21229304|ref|NP_635226.1| - 1.9e-11 44.1 25.8 1.9e-11 44.1 25.8 3.1 2 1 1 3 3 3 1 Lysylphosphatidylglycerol synthase TM region Lectin_like PF18560.1 gi|21229305|ref|NP_635227.1| - 2.4e-59 200.0 0.2 7.4e-59 198.4 0.2 1.9 1 0 0 1 1 1 1 Lectin like domain Peptidase_C1 PF00112.23 gi|21229305|ref|NP_635227.1| - 3.8e-25 89.3 0.1 6.2e-25 88.6 0.1 1.3 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.20 gi|21229305|ref|NP_635227.1| - 2.2e-17 62.6 2.4 1.5e-08 34.3 0.4 2.7 2 0 0 2 2 2 2 PKD domain Peptidase_C1_2 PF03051.15 gi|21229305|ref|NP_635227.1| - 0.016 14.0 0.2 0.29 9.9 0.1 2.1 2 0 0 2 2 2 0 Peptidase C1-like family MatE PF01554.18 gi|21229306|ref|NP_635228.1| - 1.1e-35 122.7 35.0 1e-18 67.5 12.2 2.4 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|21229306|ref|NP_635228.1| - 1e-10 41.8 44.7 1.8e-08 34.6 21.7 4.5 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Response_reg PF00072.24 gi|21229307|ref|NP_635229.1| - 3.9e-41 139.7 1.2 1.2e-19 70.5 0.1 2.6 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.26 gi|21229307|ref|NP_635229.1| - 3.7e-32 111.1 0.0 1.2e-31 109.6 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|21229307|ref|NP_635229.1| - 9.3e-19 67.2 0.2 4e-18 65.2 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 gi|21229307|ref|NP_635229.1| - 1.9e-14 53.3 0.0 2.9e-06 27.2 0.0 2.6 2 0 0 2 2 2 2 PAS domain PAS_9 PF13426.7 gi|21229307|ref|NP_635229.1| - 4.5e-14 52.6 0.1 9.5e-07 29.0 0.0 3.2 3 0 0 3 3 3 2 PAS domain PAS PF00989.25 gi|21229307|ref|NP_635229.1| - 5.4e-13 48.9 0.0 9.7e-08 32.0 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.10 gi|21229307|ref|NP_635229.1| - 5.5e-08 33.0 0.0 3.7e-05 23.9 0.0 2.6 2 1 0 2 2 2 2 PAS fold PAS_3 PF08447.12 gi|21229307|ref|NP_635229.1| - 9.7e-06 25.8 0.0 3.2e-05 24.1 0.0 1.9 2 0 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 gi|21229307|ref|NP_635229.1| - 0.048 13.6 0.0 0.16 12.0 0.0 1.8 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|21229307|ref|NP_635229.1| - 0.11 12.3 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 gi|21229308|ref|NP_635230.1| - 2e-26 92.4 0.0 2.2e-26 92.2 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Peptidase_U32 PF01136.19 gi|21229309|ref|NP_635231.1| - 1e-95 319.3 0.0 4e-76 255.2 0.0 2.3 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.8 gi|21229309|ref|NP_635231.1| - 6.3e-22 78.2 1.7 1.4e-21 77.1 1.7 1.6 1 0 0 1 1 1 1 Collagenase GTP_EFTU_D4 PF14578.6 gi|21229309|ref|NP_635231.1| - 0.00045 20.1 0.5 0.0018 18.1 0.5 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 4 ADH_N PF08240.12 gi|21229309|ref|NP_635231.1| - 0.11 12.4 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain HTH_5 PF01022.20 gi|21229310|ref|NP_635232.1| - 1.1e-11 44.4 0.0 1.6e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|21229310|ref|NP_635232.1| - 6.4e-10 38.9 0.0 8.8e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|21229310|ref|NP_635232.1| - 5.7e-06 25.8 0.1 1.2e-05 24.8 0.1 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding RepL PF05732.11 gi|21229310|ref|NP_635232.1| - 0.00029 20.3 2.4 0.00035 20.0 2.4 1.3 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_1 PF00126.27 gi|21229310|ref|NP_635232.1| - 0.00096 19.1 0.0 0.0018 18.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_IclR PF09339.10 gi|21229310|ref|NP_635232.1| - 0.0023 17.7 0.0 0.0048 16.7 0.0 1.6 1 1 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.12 gi|21229310|ref|NP_635232.1| - 0.005 16.8 0.1 0.01 15.7 0.0 1.6 2 0 0 2 2 2 1 HTH domain DUF5343 PF17278.2 gi|21229310|ref|NP_635232.1| - 0.0078 16.3 0.2 0.017 15.2 0.2 1.7 1 1 0 1 1 1 1 Family of unknown function (DUF5343) MarR_2 PF12802.7 gi|21229310|ref|NP_635232.1| - 0.0098 15.8 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_10 PF04967.12 gi|21229310|ref|NP_635232.1| - 0.013 15.3 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain DUF4423 PF14394.6 gi|21229310|ref|NP_635232.1| - 0.04 13.6 0.0 0.07 12.8 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) TrmB PF01978.19 gi|21229310|ref|NP_635232.1| - 0.096 12.6 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|21229310|ref|NP_635232.1| - 0.13 12.6 0.0 0.2 12.0 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Fe_dep_repress PF01325.19 gi|21229310|ref|NP_635232.1| - 0.16 12.2 0.0 0.27 11.5 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Mem_trans PF03547.18 gi|21229311|ref|NP_635233.1| - 5e-34 117.3 31.6 3.7e-19 68.4 8.3 2.0 1 1 1 2 2 2 2 Membrane transport protein SBF PF01758.16 gi|21229311|ref|NP_635233.1| - 0.0017 18.1 12.1 0.0017 18.1 12.1 2.9 1 1 1 3 3 3 1 Sodium Bile acid symporter family DUF1129 PF06570.11 gi|21229311|ref|NP_635233.1| - 0.12 11.8 13.6 0.015 14.8 4.4 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) SPC25 PF06703.11 gi|21229311|ref|NP_635233.1| - 2.2 8.0 6.2 1.7 8.4 0.6 2.5 2 1 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Cation_efflux PF01545.21 gi|21229312|ref|NP_635234.1| - 9.6e-05 22.2 4.8 9.6e-05 22.2 4.8 1.0 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|21229313|ref|NP_635235.1| - 8.4e-21 73.9 0.8 1.1e-20 73.5 0.8 1.1 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Cation_efflux PF01545.21 gi|21229313|ref|NP_635235.1| - 0.00023 20.9 4.4 0.00029 20.6 4.4 1.1 1 0 0 1 1 1 1 Cation efflux family BON PF04972.17 gi|21229313|ref|NP_635235.1| - 0.11 12.8 0.1 9.1 6.7 0.0 2.4 2 1 0 2 2 2 0 BON domain PEPcase_2 PF14010.6 gi|21229314|ref|NP_635236.1| - 1.8e-117 392.9 0.0 2e-117 392.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Prismane PF03063.20 gi|21229315|ref|NP_635237.1| - 2.1e-175 584.3 0.0 2.4e-175 584.1 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Fer4_7 PF12838.7 gi|21229316|ref|NP_635238.1| - 6.5e-08 33.0 4.2 0.00071 20.1 0.0 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229316|ref|NP_635238.1| - 2.4e-06 27.6 6.5 5.6e-06 26.4 6.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21229316|ref|NP_635238.1| - 2.1e-05 25.4 8.3 0.034 15.1 0.2 2.9 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Flavodoxin_5 PF12724.7 gi|21229316|ref|NP_635238.1| - 4.6e-05 23.7 0.0 7.8e-05 22.9 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin domain Fer4 PF00037.27 gi|21229316|ref|NP_635238.1| - 8.5e-05 22.2 14.0 0.00084 19.1 3.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Flavodoxin_3 PF12641.7 gi|21229316|ref|NP_635238.1| - 0.00037 20.2 0.0 0.00058 19.6 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Fer4_6 PF12837.7 gi|21229316|ref|NP_635238.1| - 0.0013 18.7 1.4 0.0013 18.7 1.4 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|21229316|ref|NP_635238.1| - 0.0072 16.4 2.2 0.0072 16.4 2.2 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21229316|ref|NP_635238.1| - 0.0092 16.5 8.8 0.052 14.1 0.1 2.7 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21229316|ref|NP_635238.1| - 0.0094 16.1 12.4 0.16 12.1 12.7 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21229316|ref|NP_635238.1| - 0.017 15.5 12.2 0.78 10.2 2.0 2.8 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21229316|ref|NP_635238.1| - 0.063 14.2 13.9 1 10.4 3.8 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain CENP-F_leu_zip PF10473.9 gi|21229316|ref|NP_635238.1| - 0.11 12.5 0.2 0.19 11.8 0.2 1.3 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fer4_4 PF12800.7 gi|21229316|ref|NP_635238.1| - 0.22 12.1 11.5 0.87 10.3 3.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21229316|ref|NP_635238.1| - 0.24 11.6 16.9 0.12 12.5 12.8 2.4 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|21229316|ref|NP_635238.1| - 0.56 11.1 7.7 0.34 11.8 0.4 2.7 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fez1 PF06818.15 gi|21229317|ref|NP_635239.1| - 0.018 15.5 7.6 0.021 15.3 7.6 1.1 1 0 0 1 1 1 0 Fez1 EIF4E-T PF10477.9 gi|21229317|ref|NP_635239.1| - 2.4 6.9 12.4 2.9 6.6 12.4 1.0 1 0 0 1 1 1 0 Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E DUF1943 PF09172.11 gi|21229317|ref|NP_635239.1| - 7.1 5.8 9.3 8.5 5.5 9.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) HTH_27 PF13463.6 gi|21229318|ref|NP_635240.1| - 2.8e-05 24.5 0.1 7.8e-05 23.1 0.1 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|21229318|ref|NP_635240.1| - 0.00037 20.0 1.0 0.00078 19.0 1.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|21229318|ref|NP_635240.1| - 0.0004 20.2 0.0 0.00071 19.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|21229318|ref|NP_635240.1| - 0.0022 17.9 0.1 0.0047 16.9 0.1 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|21229318|ref|NP_635240.1| - 0.0059 16.5 0.1 0.013 15.4 0.1 1.6 1 0 0 1 1 1 1 MarR family CarboxypepD_reg PF13620.6 gi|21229318|ref|NP_635240.1| - 0.011 16.0 0.0 0.024 14.9 0.0 1.7 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain TRP PF06011.12 gi|21229318|ref|NP_635240.1| - 0.011 14.5 0.0 0.015 14.0 0.0 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Y_Y_Y PF07495.13 gi|21229318|ref|NP_635240.1| - 0.016 15.2 0.3 0.038 13.9 0.3 1.6 1 0 0 1 1 1 0 Y_Y_Y domain Endomucin PF07010.12 gi|21229318|ref|NP_635240.1| - 0.037 14.0 0.3 0.052 13.5 0.3 1.2 1 0 0 1 1 1 0 Endomucin HTH_micro PF17007.5 gi|21229318|ref|NP_635240.1| - 0.044 12.6 0.1 0.062 12.1 0.1 1.2 1 0 0 1 1 1 0 HTH-like Chordopox_A13L PF05961.11 gi|21229318|ref|NP_635240.1| - 0.072 13.3 0.2 0.41 10.9 0.1 2.2 2 0 0 2 2 2 0 Chordopoxvirus A13L protein DUF4349 PF14257.6 gi|21229318|ref|NP_635240.1| - 0.16 11.4 0.9 0.65 9.4 0.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) Yae1_N PF09811.9 gi|21229319|ref|NP_635241.1| - 0.00022 20.8 0.3 0.15 11.8 0.1 2.2 2 0 0 2 2 2 2 Essential protein Yae1, N terminal O-antigen_lig PF13425.6 gi|21229319|ref|NP_635241.1| - 0.0049 15.7 0.4 0.0053 15.6 0.4 1.0 1 0 0 1 1 1 1 O-antigen ligase like membrane protein DUF4179 PF13786.6 gi|21229319|ref|NP_635241.1| - 0.034 14.6 0.4 0.041 14.4 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4179) CRA PF06589.11 gi|21229319|ref|NP_635241.1| - 0.041 14.0 0.2 0.061 13.4 0.1 1.4 1 1 0 1 1 1 0 Circumsporozoite-related antigen (CRA) Seadorna_Vp10 PF07322.11 gi|21229319|ref|NP_635241.1| - 0.098 12.0 0.9 0.27 10.6 0.1 1.8 1 1 1 2 2 2 0 Seadornavirus Vp10 Glyoxalase_2 PF12681.7 gi|21229320|ref|NP_635242.1| - 0.0003 20.7 0.0 0.00047 20.1 0.0 1.2 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|21229320|ref|NP_635242.1| - 0.0029 17.8 0.0 0.033 14.4 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glycos_transf_2 PF00535.26 gi|21229321|ref|NP_635243.1| - 1.4e-11 44.5 0.1 6e-11 42.4 0.1 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|21229321|ref|NP_635243.1| - 0.044 13.7 0.0 0.9 9.4 0.0 2.2 1 1 1 2 2 2 0 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|21229321|ref|NP_635243.1| - 0.088 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family group 2 vWA-TerF-like PF10138.9 gi|21229321|ref|NP_635243.1| - 0.16 12.0 0.1 4.1 7.5 0.0 2.1 2 0 0 2 2 2 0 vWA found in TerF C terminus Polysacc_synt PF01943.17 gi|21229322|ref|NP_635244.1| - 1.1e-36 126.7 28.6 1.1e-36 126.7 28.6 2.7 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|21229322|ref|NP_635244.1| - 4.7e-18 65.4 19.4 4.7e-18 65.4 19.4 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|21229322|ref|NP_635244.1| - 1e-13 51.5 17.9 1e-13 51.5 17.9 4.6 3 1 2 5 5 5 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|21229322|ref|NP_635244.1| - 1.8e-13 50.4 16.3 1.8e-13 50.4 16.3 3.6 3 0 0 3 3 3 2 MatE DUF2873 PF11395.8 gi|21229322|ref|NP_635244.1| - 0.044 13.6 0.2 0.044 13.6 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) Mito_morph_reg PF14972.6 gi|21229322|ref|NP_635244.1| - 0.29 10.7 3.1 17 5.0 1.3 2.7 2 0 0 2 2 2 0 Mitochondrial morphogenesis regulator ATP-grasp_4 PF13535.6 gi|21229323|ref|NP_635245.1| - 3.3e-61 205.6 0.1 4.7e-61 205.1 0.1 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|21229323|ref|NP_635245.1| - 5.1e-05 23.4 0.0 0.0001 22.4 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain Kinesin PF00225.23 gi|21229323|ref|NP_635245.1| - 0.015 14.3 0.1 0.021 13.7 0.1 1.2 1 0 0 1 1 1 0 Kinesin motor domain Dala_Dala_lig_C PF07478.13 gi|21229323|ref|NP_635245.1| - 0.024 14.2 0.2 0.14 11.6 0.2 2.0 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus THUMP PF02926.17 gi|21229323|ref|NP_635245.1| - 0.091 12.9 6.1 0.34 11.0 1.1 3.0 2 1 2 4 4 4 0 THUMP domain ATPgrasp_ST PF14397.6 gi|21229323|ref|NP_635245.1| - 0.13 11.4 0.0 0.2 10.8 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp SpoIIAA-like PF11964.8 gi|21229324|ref|NP_635246.1| - 1.9e-17 64.1 0.1 2.1e-17 63.9 0.1 1.0 1 0 0 1 1 1 1 SpoIIAA-like ABC_tran PF00005.27 gi|21229325|ref|NP_635247.1| - 1e-17 65.0 0.1 2.4e-17 63.7 0.0 1.6 2 0 0 2 2 2 1 ABC transporter DUF4162 PF13732.6 gi|21229325|ref|NP_635247.1| - 1.5e-11 44.9 0.1 8.4e-11 42.4 0.0 2.1 2 1 1 3 3 3 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|21229325|ref|NP_635247.1| - 1.4e-08 34.9 0.1 2.1e-08 34.3 0.1 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC2_membrane PF01061.24 gi|21229326|ref|NP_635248.1| - 1.3e-24 86.8 25.7 1.3e-24 86.8 25.7 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|21229326|ref|NP_635248.1| - 1.7e-12 47.1 28.6 1.7e-12 47.1 28.6 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein adh_short PF00106.25 gi|21229327|ref|NP_635249.1| - 2.1e-61 206.8 0.1 2.4e-61 206.6 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|21229327|ref|NP_635249.1| - 1.4e-49 168.8 0.0 1.8e-49 168.4 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|21229327|ref|NP_635249.1| - 3.7e-12 46.5 0.0 5e-12 46.1 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|21229327|ref|NP_635249.1| - 0.00099 18.6 0.1 0.0018 17.8 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|21229327|ref|NP_635249.1| - 0.0088 15.2 0.0 0.0096 15.1 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|21229327|ref|NP_635249.1| - 0.023 13.7 0.1 0.029 13.4 0.1 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family THF_DHG_CYH_C PF02882.19 gi|21229327|ref|NP_635249.1| - 0.083 12.2 0.1 0.16 11.3 0.1 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Shikimate_DH PF01488.20 gi|21229327|ref|NP_635249.1| - 0.11 12.6 0.2 0.19 11.8 0.2 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Pribosyltran PF00156.27 gi|21229328|ref|NP_635250.1| - 9.5e-22 77.2 0.0 1.1e-21 77.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Unstab_antitox PF09720.10 gi|21229328|ref|NP_635250.1| - 0.043 13.9 0.1 0.087 12.9 0.1 1.4 1 0 0 1 1 1 0 Putative addiction module component PRTase_2 PF15609.6 gi|21229328|ref|NP_635250.1| - 0.085 12.3 0.0 0.24 10.9 0.0 1.6 2 0 0 2 2 2 0 Phosphoribosyl transferase UPRTase PF14681.6 gi|21229328|ref|NP_635250.1| - 0.12 11.8 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase DDE_3 PF13358.6 gi|21229330|ref|NP_635252.1| - 1.9e-28 99.0 0.0 2.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease HTH_32 PF13565.6 gi|21229331|ref|NP_635253.1| - 7.4e-16 58.5 0.1 2.4e-13 50.5 0.0 2.1 2 0 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 gi|21229331|ref|NP_635253.1| - 1.2e-12 47.7 0.1 9.7e-12 44.7 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|21229331|ref|NP_635253.1| - 7e-08 32.0 0.1 5.3e-06 26.1 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|21229331|ref|NP_635253.1| - 0.0089 16.1 0.0 0.2 11.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21229331|ref|NP_635253.1| - 0.048 13.6 0.2 0.45 10.5 0.0 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain PHO4 PF01384.20 gi|21229332|ref|NP_635254.1| - 2.4e-96 322.7 41.6 7.2e-96 321.2 41.6 1.6 1 1 0 1 1 1 1 Phosphate transporter family PhoU_div PF01865.16 gi|21229333|ref|NP_635255.1| - 2.2e-48 164.4 0.4 2.5e-48 164.2 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.19 gi|21229333|ref|NP_635255.1| - 0.0016 18.8 0.8 1.2 9.7 0.1 2.5 2 0 0 2 2 2 2 PhoU domain BK_channel_a PF03493.18 gi|21229334|ref|NP_635256.1| - 0.14 12.3 0.4 0.53 10.5 0.4 2.0 1 1 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit DUF2970 PF11174.8 gi|21229334|ref|NP_635256.1| - 0.69 9.8 6.5 0.2 11.5 0.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2970) HTH_3 PF01381.22 gi|21229335|ref|NP_635257.1| - 6.3e-14 51.8 0.1 8.4e-14 51.4 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|21229335|ref|NP_635257.1| - 1.3e-06 28.3 0.2 1.9e-06 27.8 0.2 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|21229335|ref|NP_635257.1| - 2.4e-06 27.8 0.0 2.4e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|21229335|ref|NP_635257.1| - 7.6e-05 23.1 0.0 0.00012 22.5 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_24 PF13412.6 gi|21229335|ref|NP_635257.1| - 0.0048 16.4 0.1 0.0075 15.8 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|21229335|ref|NP_635257.1| - 0.0056 16.6 0.1 0.013 15.4 0.1 1.5 2 0 0 2 2 2 1 HTH domain HTH_Crp_2 PF13545.6 gi|21229335|ref|NP_635257.1| - 0.011 15.7 0.0 0.03 14.3 0.0 1.7 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_10 PF04967.12 gi|21229335|ref|NP_635257.1| - 0.023 14.5 0.1 0.12 12.2 0.0 1.9 2 0 0 2 2 2 0 HTH DNA binding domain HTH_23 PF13384.6 gi|21229335|ref|NP_635257.1| - 0.04 13.7 0.0 0.069 13.0 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|21229335|ref|NP_635257.1| - 0.096 12.2 0.0 0.19 11.3 0.0 1.5 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_7 PF02796.15 gi|21229335|ref|NP_635257.1| - 0.12 12.5 0.2 0.33 11.1 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase YdaS_antitoxin PF15943.5 gi|21229335|ref|NP_635257.1| - 0.13 12.1 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_AsnC-type PF13404.6 gi|21229335|ref|NP_635257.1| - 0.16 11.8 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HK PF02110.15 gi|21229336|ref|NP_635258.1| - 4.5e-79 265.3 2.8 5.1e-79 265.1 2.8 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|21229336|ref|NP_635258.1| - 1.8e-08 34.1 0.5 2.1e-08 33.9 0.5 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 gi|21229336|ref|NP_635258.1| - 3.6e-06 26.6 0.4 4.4e-06 26.4 0.4 1.2 1 0 0 1 1 1 1 Carbohydrate kinase TMP-TENI PF02581.17 gi|21229337|ref|NP_635259.1| - 5.5e-59 198.5 1.6 6.9e-59 198.2 1.6 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase Ribul_P_3_epim PF00834.19 gi|21229337|ref|NP_635259.1| - 0.0023 17.3 0.3 0.0067 15.8 0.3 1.8 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 gi|21229337|ref|NP_635259.1| - 0.027 14.2 0.9 0.048 13.4 0.5 1.6 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain His_biosynth PF00977.21 gi|21229337|ref|NP_635259.1| - 0.11 12.0 5.8 0.17 11.3 0.5 2.4 1 1 2 3 3 3 0 Histidine biosynthesis protein HTH_23 PF13384.6 gi|21229338|ref|NP_635260.1| - 8.2e-14 50.9 0.0 1.6e-12 46.8 0.0 2.4 2 1 0 2 2 2 1 Homeodomain-like domain HTH_33 PF13592.6 gi|21229338|ref|NP_635260.1| - 1.7e-12 46.8 0.3 5.7e-10 38.7 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn helix HTH_29 PF13551.6 gi|21229338|ref|NP_635260.1| - 2.3e-11 43.6 0.1 7.9e-11 41.8 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 gi|21229338|ref|NP_635260.1| - 3.7e-11 43.0 0.1 3e-10 40.1 0.0 2.3 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_32 PF13565.6 gi|21229338|ref|NP_635260.1| - 6.4e-10 39.5 0.1 5e-09 36.7 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain Terminase_5 PF06056.12 gi|21229338|ref|NP_635260.1| - 1.1e-05 25.2 0.0 2.6e-05 24.0 0.0 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) LZ_Tnp_IS481 PF13011.6 gi|21229338|ref|NP_635260.1| - 0.00063 20.2 0.1 0.0039 17.7 0.0 2.0 2 0 0 2 2 2 1 leucine-zipper of insertion element IS481 HTH_30 PF13556.6 gi|21229338|ref|NP_635260.1| - 0.00093 19.0 0.0 0.0018 18.0 0.0 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_38 PF13936.6 gi|21229338|ref|NP_635260.1| - 0.001 18.8 0.0 0.0027 17.4 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Tnp_4 PF13613.6 gi|21229338|ref|NP_635260.1| - 0.0011 18.7 0.0 0.0026 17.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix of DDE superfamily endonuclease HTH_11 PF08279.12 gi|21229338|ref|NP_635260.1| - 0.0011 18.9 0.0 0.0028 17.5 0.0 1.8 1 0 0 1 1 1 1 HTH domain HTH_40 PF14493.6 gi|21229338|ref|NP_635260.1| - 0.0015 19.0 0.0 0.0034 17.8 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_IS630 PF01710.16 gi|21229338|ref|NP_635260.1| - 0.0038 17.3 0.1 0.0096 16.0 0.0 1.7 2 0 0 2 2 2 1 Transposase Mga PF05043.13 gi|21229338|ref|NP_635260.1| - 0.0038 17.8 0.1 2 9.0 0.0 2.4 3 0 0 3 3 2 1 Mga helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|21229338|ref|NP_635260.1| - 0.0046 16.3 0.0 0.03 13.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_Tnp_1 PF01527.20 gi|21229338|ref|NP_635260.1| - 0.0052 17.1 0.7 0.009 16.3 0.1 1.8 2 0 0 2 2 1 1 Transposase HTH_Tnp_1_2 PF13022.6 gi|21229338|ref|NP_635260.1| - 0.0054 16.9 0.1 0.055 13.6 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix of insertion element transposase HTH_10 PF04967.12 gi|21229338|ref|NP_635260.1| - 0.0094 15.7 0.1 6.4 6.7 0.1 3.0 3 0 0 3 3 3 1 HTH DNA binding domain Sigma70_r4_2 PF08281.12 gi|21229338|ref|NP_635260.1| - 0.013 15.2 0.0 0.03 14.0 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 SpoIIID PF12116.8 gi|21229338|ref|NP_635260.1| - 0.019 15.0 0.1 1.1 9.4 0.0 2.3 2 0 0 2 2 2 0 Stage III sporulation protein D HTH_24 PF13412.6 gi|21229338|ref|NP_635260.1| - 0.032 13.8 0.0 0.43 10.2 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF1804 PF08822.11 gi|21229338|ref|NP_635260.1| - 0.037 14.0 0.0 0.064 13.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) HTH_7 PF02796.15 gi|21229338|ref|NP_635260.1| - 0.038 14.1 0.0 0.16 12.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase DUF2089 PF09862.9 gi|21229338|ref|NP_635260.1| - 0.05 13.6 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) GntR PF00392.21 gi|21229338|ref|NP_635260.1| - 0.062 13.0 0.0 0.35 10.6 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family bacHORMA_2 PF18173.1 gi|21229338|ref|NP_635260.1| - 0.076 12.9 0.0 0.31 10.9 0.0 2.0 1 1 0 1 1 1 0 Bacterial HORMA domain 2 HTH_3 PF01381.22 gi|21229338|ref|NP_635260.1| - 0.089 12.9 0.0 0.32 11.1 0.0 2.0 2 0 0 2 2 1 0 Helix-turn-helix HTH_IclR PF09339.10 gi|21229338|ref|NP_635260.1| - 0.093 12.5 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain DDE_3 PF13358.6 gi|21229339|ref|NP_635261.1| - 9.9e-23 80.5 0.1 1.3e-22 80.2 0.1 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF308 PF03729.13 gi|21229340|ref|NP_635262.1| - 5.4e-17 61.9 48.8 2.3e-11 43.9 14.1 3.1 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) Reprolysin_3 PF13582.6 gi|21229341|ref|NP_635263.1| - 0.041 14.4 0.1 0.048 14.2 0.1 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Radical_SAM PF04055.21 gi|21229342|ref|NP_635264.1| - 1.4e-16 61.3 0.0 9.6e-16 58.6 0.0 2.1 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|21229342|ref|NP_635264.1| - 1.5e-09 38.3 0.0 2.8e-09 37.4 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|21229342|ref|NP_635264.1| - 1.6e-06 28.2 0.0 4.2e-06 26.9 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain GCIP PF13324.6 gi|21229342|ref|NP_635264.1| - 0.1 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting DUF308 PF03729.13 gi|21229343|ref|NP_635265.1| - 7.5e-17 61.4 52.4 2.8e-11 43.6 14.7 3.3 2 2 1 3 3 3 3 Short repeat of unknown function (DUF308) SieB PF14163.6 gi|21229344|ref|NP_635266.1| - 0.046 13.2 0.5 0.046 13.2 0.5 2.2 1 1 2 3 3 3 0 Super-infection exclusion protein B PufQ PF05398.11 gi|21229344|ref|NP_635266.1| - 0.12 12.5 1.4 0.18 11.9 0.2 1.9 2 0 0 2 2 2 0 PufQ cytochrome subunit Phage_holin_3_6 PF07332.11 gi|21229344|ref|NP_635266.1| - 0.17 11.9 0.7 0.98 9.5 0.1 2.0 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III PIG-Y PF15159.6 gi|21229344|ref|NP_635266.1| - 0.41 11.6 13.1 1.5 9.8 0.7 2.6 2 1 0 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y CybS PF05328.12 gi|21229344|ref|NP_635266.1| - 0.45 10.2 5.0 0.28 10.9 1.9 2.0 1 1 1 2 2 2 0 CybS, succinate dehydrogenase cytochrome B small subunit Caroten_synth PF04240.12 gi|21229345|ref|NP_635267.1| - 4.5e-07 30.0 17.2 4.5e-07 30.0 17.2 2.2 1 1 2 3 3 3 1 Carotenoid biosynthesis protein DUF131 PF01998.17 gi|21229345|ref|NP_635267.1| - 0.04 13.6 0.1 0.04 13.6 0.1 3.0 3 0 0 3 3 3 0 Protein of unknown function DUF131 RNA_pol_Rpb4 PF03874.16 gi|21229346|ref|NP_635268.1| - 6e-07 29.8 45.2 1.1 9.6 0.3 12.0 10 2 1 11 11 11 3 RNA polymerase Rpb4 DUF496 PF04363.12 gi|21229346|ref|NP_635268.1| - 1e-05 25.5 38.3 0.082 12.9 0.9 8.7 4 3 5 10 10 10 3 Protein of unknown function (DUF496) Mo-co_dimer PF03404.16 gi|21229346|ref|NP_635268.1| - 0.00019 21.5 0.6 2.1 8.4 0.0 5.5 4 1 1 5 5 5 1 Mo-co oxidoreductase dimerisation domain ERAP1_C PF11838.8 gi|21229346|ref|NP_635268.1| - 0.0003 20.5 1.5 0.63 9.5 0.0 4.1 3 1 1 4 4 4 2 ERAP1-like C-terminal domain U3snoRNP10 PF12397.8 gi|21229346|ref|NP_635268.1| - 0.0016 18.8 6.3 24 5.3 0.0 6.4 5 2 1 6 6 6 0 U3 small nucleolar RNA-associated protein 10 PAS PF00989.25 gi|21229346|ref|NP_635268.1| - 0.0085 16.1 0.1 8.4 6.4 0.0 4.4 3 1 2 5 5 5 1 PAS fold DUF3993 PF13158.6 gi|21229346|ref|NP_635268.1| - 0.021 15.0 10.5 12 6.1 0.0 7.2 5 3 5 11 11 11 0 Protein of unknown function (DUF3993) DnaB_bind PF10410.9 gi|21229346|ref|NP_635268.1| - 0.027 14.7 7.5 18 5.6 0.1 6.5 7 0 0 7 7 6 0 DnaB-helicase binding domain of primase DUF4507 PF14964.6 gi|21229346|ref|NP_635268.1| - 0.07 12.0 0.1 0.61 8.9 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4507) Catalase-rel PF06628.12 gi|21229346|ref|NP_635268.1| - 0.096 12.9 9.7 16 5.8 0.1 7.4 8 2 1 9 9 9 0 Catalase-related immune-responsive DUF4743 PF15916.5 gi|21229346|ref|NP_635268.1| - 0.15 12.1 2.1 0.97 9.4 0.0 3.1 3 1 1 4 4 4 0 Domain of unknown function (DUF4743) Fic PF02661.18 gi|21229346|ref|NP_635268.1| - 0.23 12.4 6.5 62 4.6 0.0 6.5 5 3 1 6 6 6 0 Fic/DOC family BLM10_N PF16547.5 gi|21229346|ref|NP_635268.1| - 0.43 10.9 3.5 1.9e+02 2.4 0.1 5.6 5 2 1 6 6 6 0 Proteasome-substrate-size regulator, N-terminal PI_PP_C PF18365.1 gi|21229346|ref|NP_635268.1| - 0.72 9.8 3.6 12 5.8 0.0 4.4 5 0 0 5 5 4 0 Phosphoinositide phosphatase C-terminal domain DUF440 PF04269.12 gi|21229346|ref|NP_635268.1| - 0.89 9.9 6.6 1.3 9.3 0.8 3.7 3 0 0 3 3 3 0 Protein of unknown function, DUF440 Utp13 PF08625.11 gi|21229346|ref|NP_635268.1| - 2.5 8.0 6.0 13 5.7 0.8 4.0 3 1 0 4 4 4 0 Utp13 specific WD40 associated domain DDE_Tnp_IS66 PF03050.14 gi|21229347|ref|NP_635269.1| - 2.5e-73 247.0 0.0 2.9e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.7 gi|21229347|ref|NP_635269.1| - 4.8e-10 39.7 6.7 1.3e-09 38.2 6.7 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|21229347|ref|NP_635269.1| - 0.00015 22.0 1.1 0.62 10.3 0.0 3.0 2 1 1 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|21229347|ref|NP_635269.1| - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) zf-RING_5 PF14634.6 gi|21229347|ref|NP_635269.1| - 0.34 10.9 7.9 1 9.4 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_15 PF17032.5 gi|21229347|ref|NP_635269.1| - 1.2 10.0 7.5 0.17 12.6 2.9 2.0 2 0 0 2 2 2 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|21229347|ref|NP_635269.1| - 1.3 9.7 5.2 31 5.3 0.5 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DASH_Spc19 PF08287.11 gi|21229348|ref|NP_635270.1| - 0.025 14.5 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Spc19 SlyX PF04102.12 gi|21229348|ref|NP_635270.1| - 0.036 14.7 0.1 0.054 14.1 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.11 gi|21229348|ref|NP_635270.1| - 0.22 11.3 0.4 0.22 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) Pentapeptide PF00805.22 gi|21229349|ref|NP_635271.1| - 3.8e-28 96.7 11.4 3.8e-10 39.2 5.5 4.5 1 1 1 4 4 4 4 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|21229349|ref|NP_635271.1| - 7.1e-19 67.8 3.7 8.4e-11 41.9 0.1 2.9 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|21229349|ref|NP_635271.1| - 1.4e-13 50.7 1.7 0.00021 21.4 2.9 3.8 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) DUF4145 PF13643.6 gi|21229350|ref|NP_635272.1| - 6.3e-07 29.4 0.0 9.8e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4145) HEPN_Apea PF18739.1 gi|21229350|ref|NP_635272.1| - 0.073 13.5 0.8 0.16 12.4 0.8 1.6 1 1 0 1 1 1 0 Apea-like HEPN DUF642 PF04862.12 gi|21229350|ref|NP_635272.1| - 0.088 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF642) Cas_Cas1 PF01867.16 gi|21229351|ref|NP_635273.1| - 2.4e-73 246.7 0.1 5.7e-73 245.5 0.0 1.5 2 0 0 2 2 2 1 CRISPR associated protein Cas1 TCTP PF00838.17 gi|21229353|ref|NP_635275.1| - 0.022 15.1 0.6 0.033 14.5 0.6 1.3 1 0 0 1 1 1 0 Translationally controlled tumour protein HNH PF01844.23 gi|21229354|ref|NP_635276.1| - 0.0058 16.8 5.1 0.12 12.6 5.1 2.2 1 1 0 1 1 1 1 HNH endonuclease Cytochrome_C7 PF14522.6 gi|21229354|ref|NP_635276.1| - 0.16 12.0 0.4 0.16 12.0 0.4 2.0 1 1 1 2 2 2 0 Cytochrome c7 and related cytochrome c DNA_pol_B PF00136.21 gi|21229355|ref|NP_635277.1| - 2.6e-06 26.5 0.0 0.056 12.1 0.0 2.4 2 0 0 2 2 2 2 DNA polymerase family B DNA_pol_A_exo1 PF01612.20 gi|21229355|ref|NP_635277.1| - 0.032 13.9 0.3 2.3 7.9 0.1 2.8 3 0 0 3 3 3 0 3'-5' exonuclease DUF1221 PF06760.11 gi|21229356|ref|NP_635278.1| - 0.03 13.8 0.1 0.068 12.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1221) Gemini_AL1_M PF08283.11 gi|21229356|ref|NP_635278.1| - 0.86 9.7 0.0 0.86 9.7 0.0 3.5 3 1 1 4 4 4 0 Geminivirus rep protein central domain PspA_IM30 PF04012.12 gi|21229357|ref|NP_635279.1| - 0.015 14.9 0.5 0.018 14.6 0.5 1.1 1 0 0 1 1 1 0 PspA/IM30 family DUF836 PF05768.14 gi|21229357|ref|NP_635279.1| - 0.083 13.3 2.2 0.12 12.8 2.2 1.4 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Endonuc_Holl PF10107.9 gi|21229359|ref|NP_635281.1| - 7.7e-66 220.9 0.3 9.8e-66 220.5 0.3 1.1 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase DUF4263 PF14082.6 gi|21229359|ref|NP_635281.1| - 0.016 15.4 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4263) Med26 PF08711.11 gi|21229359|ref|NP_635281.1| - 0.12 12.4 0.4 5.4 7.1 0.1 2.4 1 1 1 2 2 2 0 TFIIS helical bundle-like domain MS_channel PF00924.18 gi|21229361|ref|NP_635283.1| - 3.5e-36 124.7 0.1 3.5e-36 124.7 0.1 1.4 2 0 0 2 2 2 1 Mechanosensitive ion channel UCR_14kD PF02271.16 gi|21229361|ref|NP_635283.1| - 0.0043 17.0 0.0 0.0093 15.9 0.0 1.5 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit TctA PF01970.16 gi|21229361|ref|NP_635283.1| - 0.0072 15.1 6.5 0.01 14.6 6.5 1.2 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family SHP PF03579.13 gi|21229361|ref|NP_635283.1| - 0.049 13.6 2.4 0.12 12.3 2.4 1.6 1 0 0 1 1 1 0 Small hydrophobic protein PHO4 PF01384.20 gi|21229361|ref|NP_635283.1| - 0.058 12.4 0.1 0.057 12.5 0.1 1.1 1 0 0 1 1 1 0 Phosphate transporter family MFS_1 PF07690.16 gi|21229361|ref|NP_635283.1| - 0.12 11.2 4.4 0.17 10.8 4.4 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF4293 PF14126.6 gi|21229361|ref|NP_635283.1| - 0.16 12.2 3.6 0.28 11.4 3.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4293) Caps_synth_CapC PF14102.6 gi|21229361|ref|NP_635283.1| - 1.4 9.4 6.0 0.58 10.6 1.7 2.1 1 1 1 2 2 2 0 Capsule biosynthesis CapC DUF421 PF04239.12 gi|21229362|ref|NP_635284.1| - 9.8e-11 41.4 0.0 1.4e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF421) YpzI PF14140.6 gi|21229362|ref|NP_635284.1| - 0.033 13.9 0.0 0.058 13.2 0.0 1.3 1 0 0 1 1 1 0 YpzI-like protein DUF1146 PF06612.11 gi|21229362|ref|NP_635284.1| - 0.11 12.5 1.8 0.21 11.7 1.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1146) MS_channel PF00924.18 gi|21229363|ref|NP_635285.1| - 4e-28 98.4 3.7 9.2e-28 97.2 3.7 1.6 1 1 0 1 1 1 1 Mechanosensitive ion channel DUF2417 PF10329.9 gi|21229363|ref|NP_635285.1| - 1.1 8.6 7.5 1.9 7.8 7.5 1.3 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Phage_holin_5_2 PF16079.5 gi|21229363|ref|NP_635285.1| - 5.8 7.3 7.0 1.8 8.9 0.4 3.1 4 0 0 4 4 4 0 Phage holin family Hol44, in holin superfamily V AzlC PF03591.14 gi|21229364|ref|NP_635286.1| - 1.9e-43 148.2 8.4 1.9e-43 148.2 8.4 1.7 2 0 0 2 2 2 1 AzlC protein AzlD PF05437.12 gi|21229365|ref|NP_635287.1| - 8.2e-22 77.2 6.3 9.3e-22 77.1 6.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) NIR_SIR PF01077.22 gi|21229366|ref|NP_635288.1| - 2.1e-32 111.8 0.1 3.4e-32 111.2 0.1 1.3 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|21229366|ref|NP_635288.1| - 5.6e-20 71.0 0.0 1e-19 70.1 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4 PF00037.27 gi|21229366|ref|NP_635288.1| - 3.7e-13 48.7 13.3 5e-07 29.3 2.4 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|21229366|ref|NP_635288.1| - 1.9e-08 34.0 12.1 2.2e-05 24.3 2.2 3.3 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21229366|ref|NP_635288.1| - 2.3e-08 34.5 39.7 9e-07 29.4 13.2 2.6 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229366|ref|NP_635288.1| - 2.1e-07 31.0 13.2 2.1e-07 31.0 13.2 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21229366|ref|NP_635288.1| - 5.7e-06 26.3 13.8 5.7e-06 26.3 13.8 2.2 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|21229366|ref|NP_635288.1| - 3e-05 24.1 22.0 0.0025 17.9 4.5 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21229366|ref|NP_635288.1| - 0.00013 21.9 12.1 0.0017 18.3 2.7 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21229366|ref|NP_635288.1| - 0.0039 17.6 14.4 0.014 15.9 4.8 3.9 4 1 0 4 4 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21229366|ref|NP_635288.1| - 0.0092 16.9 17.6 0.16 12.9 5.6 3.0 2 1 1 3 3 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|21229366|ref|NP_635288.1| - 0.047 14.1 0.2 0.047 14.1 0.2 2.9 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21229366|ref|NP_635288.1| - 0.062 14.3 3.8 0.062 14.3 3.8 4.1 4 1 1 5 5 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|21229366|ref|NP_635288.1| - 0.084 13.7 14.9 0.24 12.3 3.6 2.9 2 1 1 3 3 2 0 4Fe-4S dicluster domain DUF561 PF04481.12 gi|21229366|ref|NP_635288.1| - 0.12 11.5 0.0 0.21 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Fer4_18 PF13746.6 gi|21229366|ref|NP_635288.1| - 0.15 12.3 8.9 0.37 11.0 8.9 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21229366|ref|NP_635288.1| - 4.3 7.9 18.9 1.6 9.4 3.4 3.6 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|21229366|ref|NP_635288.1| - 7.6 7.2 21.9 3.9 8.1 2.4 2.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain DDE_Tnp_1 PF01609.21 gi|21229367|ref|NP_635289.1| - 1.5e-12 47.6 0.8 2.3e-12 47.0 0.8 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.9 gi|21229367|ref|NP_635289.1| - 0.0039 17.2 0.1 0.013 15.5 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) DDE_Tnp_1_4 PF13701.6 gi|21229367|ref|NP_635289.1| - 0.025 12.8 1.1 0.068 11.4 1.1 1.7 1 1 0 1 1 1 0 Transposase DDE domain group 1 7TM_GPCR_Srt PF10321.9 gi|21229368|ref|NP_635290.1| - 0.094 11.7 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt Bactofilin PF04519.13 gi|21229369|ref|NP_635291.1| - 1.9e-06 28.0 12.3 6.7e-05 23.1 2.4 2.3 1 1 1 2 2 2 2 Polymer-forming cytoskeletal FapA PF03961.13 gi|21229369|ref|NP_635291.1| - 0.0011 17.7 14.8 0.067 11.8 14.8 2.1 1 1 0 1 1 1 1 Flagellar Assembly Protein A DUF2207 PF09972.9 gi|21229369|ref|NP_635291.1| - 1.2 7.8 0.0 1.2 7.8 0.0 3.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) Nitroreductase PF00881.24 gi|21229370|ref|NP_635292.1| - 1.1e-28 100.4 0.0 1.8e-13 50.9 0.0 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|21229370|ref|NP_635292.1| - 3.4e-11 43.2 0.0 0.0016 18.1 0.0 3.1 2 1 1 3 3 3 3 Putative TM nitroreductase Hexapep PF00132.24 gi|21229371|ref|NP_635293.1| - 5e-08 32.4 12.4 1.2e-05 24.8 3.1 2.6 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|21229371|ref|NP_635293.1| - 0.00038 20.2 12.3 0.0042 16.8 3.6 3.2 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase FeThRed_B PF02943.15 gi|21229372|ref|NP_635294.1| - 4e-22 78.2 1.0 4e-22 78.2 1.0 1.5 2 0 0 2 2 2 1 Ferredoxin thioredoxin reductase catalytic beta chain HypA PF01155.19 gi|21229372|ref|NP_635294.1| - 0.028 14.4 4.3 0.095 12.7 1.3 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3235 PF11574.8 gi|21229372|ref|NP_635294.1| - 0.18 12.7 0.1 0.38 11.6 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3235) Glutaredoxin PF00462.24 gi|21229373|ref|NP_635295.1| - 1.2e-12 47.9 0.1 1.8e-12 47.3 0.1 1.3 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 gi|21229373|ref|NP_635295.1| - 0.0037 17.6 0.0 0.0044 17.4 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Thioredoxin_3 PF13192.6 gi|21229373|ref|NP_635295.1| - 0.018 15.1 0.5 0.073 13.1 0.5 1.9 1 1 0 1 1 1 0 Thioredoxin domain GST_N_2 PF13409.6 gi|21229373|ref|NP_635295.1| - 0.019 15.2 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.6 gi|21229373|ref|NP_635295.1| - 0.047 14.2 0.1 0.18 12.3 0.1 1.8 1 1 0 1 1 1 0 Thioredoxin-like domain MFS_1 PF07690.16 gi|21229374|ref|NP_635296.1| - 4e-72 243.1 67.2 5.7e-57 193.2 42.6 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|21229374|ref|NP_635296.1| - 3.1e-12 46.1 13.6 3.1e-12 46.1 13.6 2.8 2 2 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 gi|21229374|ref|NP_635296.1| - 2.8e-08 33.0 25.3 1.8e-06 27.1 7.4 2.4 2 1 0 2 2 2 2 MFS_1 like family MFS_3 PF05977.13 gi|21229374|ref|NP_635296.1| - 3.5e-07 29.0 11.7 5.8e-07 28.3 3.9 2.5 2 1 0 2 2 2 2 Transmembrane secretion effector MFS_2 PF13347.6 gi|21229374|ref|NP_635296.1| - 7e-06 24.9 32.9 1.9e-05 23.4 16.5 2.4 2 0 0 2 2 2 2 MFS/sugar transport protein PUCC PF03209.15 gi|21229374|ref|NP_635296.1| - 2.3e-05 23.6 15.8 0.00023 20.3 5.3 2.4 2 0 0 2 2 2 2 PUCC protein OATP PF03137.20 gi|21229374|ref|NP_635296.1| - 0.51 8.6 28.1 0.086 11.1 1.9 4.1 2 2 2 4 4 4 0 Organic Anion Transporter Polypeptide (OATP) family DUF4200 PF13863.6 gi|21229375|ref|NP_635297.1| - 0.01 16.3 18.8 0.016 15.6 18.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) DUF2207 PF09972.9 gi|21229375|ref|NP_635297.1| - 0.01 14.6 2.1 0.011 14.5 2.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) OmpH PF03938.14 gi|21229375|ref|NP_635297.1| - 0.051 13.9 17.4 0.064 13.6 17.4 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) MCU PF04678.13 gi|21229375|ref|NP_635297.1| - 0.051 13.7 4.3 0.061 13.4 4.3 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter zf-CpG_bind_C PF12269.8 gi|21229375|ref|NP_635297.1| - 0.055 13.2 8.1 0.071 12.9 8.1 1.2 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain Connexin PF00029.19 gi|21229375|ref|NP_635297.1| - 0.063 13.0 6.5 0.072 12.8 6.5 1.0 1 0 0 1 1 1 0 Connexin Folate_carrier PF01770.18 gi|21229375|ref|NP_635297.1| - 0.073 11.8 1.1 0.086 11.6 1.1 1.0 1 0 0 1 1 1 0 Reduced folate carrier RR_TM4-6 PF06459.12 gi|21229375|ref|NP_635297.1| - 0.091 12.6 5.0 0.1 12.4 5.0 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF1664 PF07889.12 gi|21229375|ref|NP_635297.1| - 0.1 12.6 4.8 0.12 12.4 4.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) EOS1 PF12326.8 gi|21229375|ref|NP_635297.1| - 0.11 12.5 3.8 0.12 12.3 3.8 1.1 1 0 0 1 1 1 0 N-glycosylation protein Eapp_C PF10238.9 gi|21229375|ref|NP_635297.1| - 0.13 12.4 3.7 0.16 12.0 3.7 1.2 1 0 0 1 1 1 0 E2F-associated phosphoprotein EMC3_TMCO1 PF01956.16 gi|21229375|ref|NP_635297.1| - 0.14 11.9 11.2 0.18 11.5 11.2 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like GrpE PF01025.19 gi|21229375|ref|NP_635297.1| - 0.14 11.8 7.9 0.15 11.7 7.9 1.1 1 0 0 1 1 1 0 GrpE Com_YlbF PF06133.11 gi|21229375|ref|NP_635297.1| - 0.24 12.0 12.9 0.35 11.5 12.9 1.3 1 0 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA DUF2828 PF11443.8 gi|21229375|ref|NP_635297.1| - 0.28 9.2 8.6 0.31 9.1 8.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) TRAP-gamma PF07074.12 gi|21229375|ref|NP_635297.1| - 0.35 10.4 6.3 0.46 10.0 6.3 1.1 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Borrelia_P83 PF05262.11 gi|21229375|ref|NP_635297.1| - 0.4 9.1 12.5 0.47 8.9 12.5 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF2203 PF09969.9 gi|21229375|ref|NP_635297.1| - 0.44 11.3 7.9 0.53 11.0 7.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) AAA_11 PF13086.6 gi|21229375|ref|NP_635297.1| - 0.55 10.0 8.6 0.64 9.8 8.6 1.0 1 0 0 1 1 1 0 AAA domain DUF3464 PF11947.8 gi|21229375|ref|NP_635297.1| - 0.55 10.0 5.1 0.65 9.7 5.1 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 DUF4407 PF14362.6 gi|21229375|ref|NP_635297.1| - 0.65 9.3 5.9 0.81 9.0 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PEARLI-4 PF05278.12 gi|21229375|ref|NP_635297.1| - 0.66 9.5 12.8 1.1 8.8 12.8 1.3 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) DUF4337 PF14235.6 gi|21229375|ref|NP_635297.1| - 0.7 10.0 4.7 0.78 9.8 4.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF3552 PF12072.8 gi|21229375|ref|NP_635297.1| - 0.81 9.1 18.6 0.97 8.8 18.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) EMP24_GP25L PF01105.24 gi|21229375|ref|NP_635297.1| - 0.94 9.4 11.7 4 7.3 11.7 1.8 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD OATP PF03137.20 gi|21229375|ref|NP_635297.1| - 0.97 7.6 4.6 1 7.6 4.6 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family EzrA PF06160.12 gi|21229375|ref|NP_635297.1| - 1.8 6.6 13.4 2.2 6.3 13.4 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA CDC45 PF02724.14 gi|21229375|ref|NP_635297.1| - 1.9 6.7 9.8 2 6.6 9.8 1.0 1 0 0 1 1 1 0 CDC45-like protein DDRGK PF09756.9 gi|21229375|ref|NP_635297.1| - 2.1 7.9 26.0 2.5 7.6 26.0 1.1 1 0 0 1 1 1 0 DDRGK domain HAUS6_N PF14661.6 gi|21229375|ref|NP_635297.1| - 2.1 7.8 13.5 2.8 7.5 13.5 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF773 PF05600.12 gi|21229375|ref|NP_635297.1| - 3.2 6.4 13.1 4 6.1 13.1 1.1 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 DUF21 PF01595.20 gi|21229376|ref|NP_635298.1| - 4.9e-36 124.1 0.5 6.9e-36 123.6 0.5 1.1 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain DUF21 PF01595.20 gi|21229377|ref|NP_635299.1| - 3.3e-47 160.4 6.6 5.1e-47 159.8 6.6 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|21229377|ref|NP_635299.1| - 1.4e-20 73.1 0.0 3.6e-20 71.7 0.0 1.8 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 gi|21229377|ref|NP_635299.1| - 2.7e-16 59.7 3.9 1.9e-07 31.4 0.1 2.6 2 0 0 2 2 2 2 CBS domain Nitroreductase PF00881.24 gi|21229378|ref|NP_635300.1| - 6.3e-17 62.2 0.0 6.6e-09 36.0 0.0 2.4 2 0 0 2 2 2 2 Nitroreductase family DJ-1_PfpI PF01965.24 gi|21229379|ref|NP_635301.1| - 9.4e-39 132.9 0.2 1.1e-38 132.6 0.2 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 gi|21229379|ref|NP_635301.1| - 0.011 15.4 0.3 1.1 8.9 0.0 2.6 1 1 1 2 2 2 0 ThiJ/PfpI family-like PS_pyruv_trans PF04230.13 gi|21229379|ref|NP_635301.1| - 0.13 12.2 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase DUF92 PF01940.16 gi|21229380|ref|NP_635302.1| - 8.1e-54 182.5 14.8 8.1e-54 182.5 14.8 2.4 2 1 0 2 2 2 2 Integral membrane protein DUF92 DUF4175 PF13779.6 gi|21229380|ref|NP_635302.1| - 0.11 10.4 1.7 0.17 9.8 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) HXXEE PF13787.6 gi|21229380|ref|NP_635302.1| - 1.7 9.5 7.4 14 6.5 0.9 2.9 3 0 0 3 3 3 0 Protein of unknown function with HXXEE motif Pyr_redox_2 PF07992.14 gi|21229381|ref|NP_635303.1| - 4.3e-41 141.1 0.0 6.3e-41 140.5 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|21229381|ref|NP_635303.1| - 4e-21 75.3 0.7 1.7e-20 73.3 0.2 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|21229381|ref|NP_635303.1| - 3.2e-13 50.0 0.0 1e-12 48.4 0.0 1.9 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|21229381|ref|NP_635303.1| - 1.3e-07 31.2 0.0 3.2e-07 29.9 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|21229381|ref|NP_635303.1| - 0.00028 20.2 0.2 0.074 12.2 0.2 2.5 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 gi|21229381|ref|NP_635303.1| - 0.015 14.4 0.0 0.028 13.5 0.0 1.4 1 0 0 1 1 1 0 FAD binding domain Disaggr_repeat PF06848.11 gi|21229382|ref|NP_635304.1| - 1.1e-88 295.7 2.5 1.1e-88 295.7 2.5 2.1 2 0 0 2 2 2 1 Disaggregatase related repeat PKD PF00801.20 gi|21229382|ref|NP_635304.1| - 3e-12 46.2 6.3 1.1e-11 44.4 6.3 2.0 1 0 0 1 1 1 1 PKD domain DUF4091 PF13320.6 gi|21229382|ref|NP_635304.1| - 0.00028 21.0 0.5 0.00028 21.0 0.5 3.1 2 1 0 2 2 2 1 Domain of unknown function (DUF4091) Met_10 PF02475.16 gi|21229383|ref|NP_635305.1| - 3.8e-50 170.4 0.0 4.8e-50 170.1 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_15 PF09445.10 gi|21229383|ref|NP_635305.1| - 0.00011 21.8 0.0 0.00016 21.3 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 gi|21229383|ref|NP_635305.1| - 0.0066 16.1 0.0 0.0093 15.6 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PRMT5 PF05185.16 gi|21229383|ref|NP_635305.1| - 0.0083 16.0 0.0 0.02 14.7 0.0 1.6 2 0 0 2 2 2 1 PRMT5 arginine-N-methyltransferase TRM PF02005.16 gi|21229383|ref|NP_635305.1| - 0.01 15.1 0.0 0.024 13.8 0.0 1.6 2 0 0 2 2 2 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_3 PF01596.17 gi|21229383|ref|NP_635305.1| - 0.068 12.3 0.0 0.14 11.3 0.0 1.5 1 0 0 1 1 1 0 O-methyltransferase PhnI PF05861.12 gi|21229383|ref|NP_635305.1| - 0.069 12.0 0.0 0.1 11.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnI) Glyco_transf_92 PF01697.27 gi|21229383|ref|NP_635305.1| - 0.12 12.0 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 92 Methyltransf_11 PF08241.12 gi|21229383|ref|NP_635305.1| - 0.16 12.7 0.0 0.75 10.5 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase domain Helicase_C_2 PF13307.6 gi|21229384|ref|NP_635306.1| - 2.2e-20 73.5 0.0 3.9e-20 72.7 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain ResIII PF04851.15 gi|21229384|ref|NP_635306.1| - 2.2e-07 31.1 0.0 5.6e-07 29.7 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.15 gi|21229384|ref|NP_635306.1| - 0.0018 18.0 0.0 0.0036 16.9 0.0 1.6 1 0 0 1 1 1 1 DEAD_2 AAA_16 PF13191.6 gi|21229384|ref|NP_635306.1| - 0.0019 18.6 0.0 0.0075 16.7 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain Rit1_C PF17184.4 gi|21229384|ref|NP_635306.1| - 0.055 12.9 0.1 0.1 12.0 0.1 1.4 1 0 0 1 1 1 0 Rit1 N-terminal domain T2SSE PF00437.20 gi|21229384|ref|NP_635306.1| - 0.09 11.8 0.3 0.23 10.5 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein DEAD PF00270.29 gi|21229384|ref|NP_635306.1| - 0.095 12.5 0.0 0.28 10.9 0.0 2.2 1 1 0 1 1 1 0 DEAD/DEAH box helicase Pyrophosphatase PF00719.19 gi|21229385|ref|NP_635307.1| - 5e-06 26.4 0.0 6.6e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Inorganic pyrophosphatase Radical_SAM PF04055.21 gi|21229386|ref|NP_635308.1| - 7.5e-17 62.2 0.3 1.3e-16 61.4 0.0 1.5 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.6 gi|21229386|ref|NP_635308.1| - 2.5e-06 27.9 0.0 8e-06 26.3 0.0 2.0 1 1 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|21229386|ref|NP_635308.1| - 0.00024 21.4 0.0 0.0005 20.3 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|21229386|ref|NP_635308.1| - 0.0061 16.7 0.0 0.011 15.8 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Metallophos PF00149.28 gi|21229387|ref|NP_635309.1| - 2.1e-12 48.0 1.2 3.1e-12 47.4 1.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|21229387|ref|NP_635309.1| - 8.5e-08 32.6 0.2 1.6e-07 31.6 0.2 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain CoA_binding_2 PF13380.6 gi|21229387|ref|NP_635309.1| - 0.0045 17.5 0.0 0.019 15.5 0.0 2.0 1 1 0 1 1 1 1 CoA binding domain Glycos_transf_2 PF00535.26 gi|21229387|ref|NP_635309.1| - 0.077 12.8 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 CBM_X2 PF03442.14 gi|21229389|ref|NP_635311.1| - 0.025 14.7 0.1 0.064 13.4 0.1 1.6 1 0 0 1 1 1 0 Carbohydrate binding domain X2 Flavin_Reduct PF01613.18 gi|21229390|ref|NP_635312.1| - 6.2e-19 68.6 0.0 7.9e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 gi|21229390|ref|NP_635312.1| - 0.087 12.6 0.0 0.11 12.2 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF447) UvrB_inter PF17757.1 gi|21229391|ref|NP_635313.1| - 1.8e-30 104.9 0.6 5.7e-30 103.3 0.6 1.9 1 0 0 1 1 1 1 UvrB interaction domain UvrB PF12344.8 gi|21229391|ref|NP_635313.1| - 1.4e-21 76.1 1.1 1.4e-21 76.1 1.1 2.0 2 0 0 2 2 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|21229391|ref|NP_635313.1| - 4.4e-18 65.7 0.3 1.2e-17 64.3 0.3 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|21229391|ref|NP_635313.1| - 6.3e-13 49.1 0.0 2.6e-11 43.8 0.0 2.7 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit UVR PF02151.19 gi|21229391|ref|NP_635313.1| - 3.9e-09 36.0 2.8 1.9e-08 33.8 2.8 2.3 1 0 0 1 1 1 1 UvrB/uvrC motif DEAD PF00270.29 gi|21229391|ref|NP_635313.1| - 9e-05 22.3 0.1 0.0089 15.8 0.0 3.3 3 1 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|21229391|ref|NP_635313.1| - 0.0057 16.4 0.0 0.079 12.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|21229391|ref|NP_635313.1| - 0.021 15.1 0.3 11 6.3 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|21229391|ref|NP_635313.1| - 0.028 14.8 0.0 0.31 11.4 0.0 2.5 2 1 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.6 gi|21229391|ref|NP_635313.1| - 0.029 14.7 0.2 0.6 10.4 0.0 3.2 3 2 0 3 3 3 0 AAA domain SWI2_SNF2 PF18766.1 gi|21229391|ref|NP_635313.1| - 0.064 12.9 0.9 0.94 9.1 0.0 2.9 4 0 0 4 4 4 0 SWI2/SNF2 ATPase Ribonuc_red_lgN PF00317.21 gi|21229391|ref|NP_635313.1| - 0.065 13.2 0.1 0.43 10.6 0.0 2.4 2 0 0 2 2 2 0 Ribonucleotide reductase, all-alpha domain Flavi_DEAD PF07652.14 gi|21229391|ref|NP_635313.1| - 0.069 13.1 0.6 0.34 10.9 0.2 2.4 3 0 0 3 3 3 0 Flavivirus DEAD domain AAA PF00004.29 gi|21229391|ref|NP_635313.1| - 0.095 13.1 1.5 2.9 8.3 0.0 3.2 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.17 gi|21229391|ref|NP_635313.1| - 0.12 12.4 2.7 0.13 12.4 0.2 2.3 3 0 0 3 3 3 0 Helicase HerA, central domain UvrC_HhH_N PF08459.11 gi|21229392|ref|NP_635314.1| - 4.9e-52 175.9 0.7 9.3e-52 175.0 0.0 1.8 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.24 gi|21229392|ref|NP_635314.1| - 7.3e-09 35.8 0.0 2.2e-08 34.2 0.0 1.9 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.19 gi|21229392|ref|NP_635314.1| - 9e-08 31.6 7.8 2.5e-07 30.2 7.8 1.8 1 0 0 1 1 1 1 UvrB/uvrC motif UvrA_DNA-bind PF17755.1 gi|21229393|ref|NP_635315.1| - 3e-31 108.0 0.1 2.3e-29 101.9 0.0 3.0 3 0 0 3 3 2 1 UvrA DNA-binding domain UvrA_inter PF17760.1 gi|21229393|ref|NP_635315.1| - 2.4e-30 104.8 0.2 4e-29 100.9 0.0 2.8 3 0 0 3 3 3 1 UvrA interaction domain ABC_tran PF00005.27 gi|21229393|ref|NP_635315.1| - 1.2e-20 74.4 1.5 1.9e-08 34.9 0.1 4.5 4 1 0 4 4 3 3 ABC transporter SMC_N PF02463.19 gi|21229393|ref|NP_635315.1| - 1.5e-11 44.1 0.0 0.00035 20.1 0.0 3.8 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|21229393|ref|NP_635315.1| - 6.3e-10 39.7 0.3 0.0015 18.9 0.0 3.6 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|21229393|ref|NP_635315.1| - 8.7e-09 35.0 0.4 0.0039 16.9 0.3 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|21229393|ref|NP_635315.1| - 1.3e-08 35.1 4.3 0.047 13.5 0.1 4.6 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|21229393|ref|NP_635315.1| - 1.7e-06 28.3 1.2 0.27 11.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain AAA_14 PF13173.6 gi|21229393|ref|NP_635315.1| - 1.1e-05 25.5 0.0 0.53 10.3 0.0 3.4 3 0 0 3 3 3 2 AAA domain DnaJ_CXXCXGXG PF00684.19 gi|21229393|ref|NP_635315.1| - 1.9e-05 24.9 4.2 0.029 14.7 0.4 3.8 3 0 0 3 3 3 1 DnaJ central domain RsgA_GTPase PF03193.16 gi|21229393|ref|NP_635315.1| - 2.5e-05 24.2 0.1 0.19 11.6 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase Viral_helicase1 PF01443.18 gi|21229393|ref|NP_635315.1| - 4.3e-05 23.4 0.1 0.088 12.5 0.0 2.7 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 gi|21229393|ref|NP_635315.1| - 4.9e-05 23.0 0.0 0.47 10.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain cobW PF02492.19 gi|21229393|ref|NP_635315.1| - 0.00012 21.7 0.3 0.064 12.8 0.1 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 gi|21229393|ref|NP_635315.1| - 0.00013 21.3 0.1 0.17 11.1 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_18 PF13238.6 gi|21229393|ref|NP_635315.1| - 0.00017 22.1 0.2 0.36 11.4 0.1 3.1 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|21229393|ref|NP_635315.1| - 0.00023 21.3 0.0 0.93 9.6 0.0 2.8 3 0 0 3 3 2 2 AAA domain T2SSE PF00437.20 gi|21229393|ref|NP_635315.1| - 0.00045 19.4 0.2 0.91 8.5 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein ATPase PF06745.13 gi|21229393|ref|NP_635315.1| - 0.00066 19.1 3.5 0.18 11.1 0.0 3.5 4 0 0 4 4 3 1 KaiC AAA_23 PF13476.6 gi|21229393|ref|NP_635315.1| - 0.00088 19.8 12.1 0.025 15.1 0.1 3.6 4 0 0 4 4 3 2 AAA domain APS_kinase PF01583.20 gi|21229393|ref|NP_635315.1| - 0.00089 19.2 0.2 1.2 9.1 0.0 2.6 2 0 0 2 2 2 2 Adenylylsulphate kinase NACHT PF05729.12 gi|21229393|ref|NP_635315.1| - 0.002 18.1 0.1 1 9.2 0.0 2.4 2 0 0 2 2 2 1 NACHT domain BCA_ABC_TP_C PF12399.8 gi|21229393|ref|NP_635315.1| - 0.002 18.0 5.4 0.21 11.6 0.2 2.8 2 0 0 2 2 2 2 Branched-chain amino acid ATP-binding cassette transporter RNA_helicase PF00910.22 gi|21229393|ref|NP_635315.1| - 0.0025 18.2 0.2 0.74 10.2 0.0 2.9 3 0 0 3 3 2 1 RNA helicase AAA_24 PF13479.6 gi|21229393|ref|NP_635315.1| - 0.0029 17.3 0.6 3.6 7.3 0.1 2.9 3 0 0 3 3 3 2 AAA domain ATPase_2 PF01637.18 gi|21229393|ref|NP_635315.1| - 0.004 17.1 0.0 1.5 8.7 0.0 2.7 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_30 PF13604.6 gi|21229393|ref|NP_635315.1| - 0.013 15.2 0.6 8.5 6.0 0.2 2.9 3 0 0 3 3 3 0 AAA domain MeaB PF03308.16 gi|21229393|ref|NP_635315.1| - 0.017 14.2 0.2 6.5 5.7 0.0 2.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PRK PF00485.18 gi|21229393|ref|NP_635315.1| - 0.023 14.4 0.2 7.1 6.3 0.0 2.9 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_28 PF13521.6 gi|21229393|ref|NP_635315.1| - 0.034 14.4 0.2 7 6.9 0.0 2.9 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|21229393|ref|NP_635315.1| - 0.041 13.6 11.8 7.6 6.1 0.0 4.9 4 2 0 5 5 5 0 AAA ATPase domain DAP3 PF10236.9 gi|21229393|ref|NP_635315.1| - 0.066 12.4 0.2 3.2 6.8 0.1 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AAA_7 PF12775.7 gi|21229393|ref|NP_635315.1| - 0.13 11.7 0.1 9.7 5.7 0.1 2.9 3 0 0 3 3 3 0 P-loop containing dynein motor region NTPase_1 PF03266.15 gi|21229393|ref|NP_635315.1| - 0.13 12.1 3.5 10 6.0 0.1 3.0 3 0 0 3 3 2 0 NTPase MMR_HSR1 PF01926.23 gi|21229393|ref|NP_635315.1| - 0.16 12.1 0.6 19 5.4 0.0 3.3 4 0 0 4 4 2 0 50S ribosome-binding GTPase Zn-ribbon_8 PF09723.10 gi|21229393|ref|NP_635315.1| - 2.4 8.3 11.5 4.9 7.4 0.8 3.7 3 0 0 3 3 3 0 Zinc ribbon domain Lar_restr_allev PF14354.6 gi|21229393|ref|NP_635315.1| - 5.4 7.5 7.8 18 5.8 0.2 3.4 3 0 0 3 3 3 0 Restriction alleviation protein Lar DrsE PF02635.15 gi|21229394|ref|NP_635316.1| - 6e-12 46.0 0.0 7.4e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family Fer4 PF00037.27 gi|21229395|ref|NP_635317.1| - 4.2e-08 32.7 9.2 1.1e-05 25.0 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21229395|ref|NP_635317.1| - 1.4e-06 29.1 11.1 7.5e-06 26.8 11.1 2.0 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|21229395|ref|NP_635317.1| - 4.6e-06 26.7 9.5 0.00042 20.4 11.6 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21229395|ref|NP_635317.1| - 8.6e-06 25.6 8.3 0.002 18.1 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21229395|ref|NP_635317.1| - 1.8e-05 25.2 7.9 3.4e-05 24.4 7.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21229395|ref|NP_635317.1| - 0.00037 20.4 9.5 0.018 15.1 2.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|21229395|ref|NP_635317.1| - 0.00079 19.5 10.6 0.0056 16.8 2.7 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21229395|ref|NP_635317.1| - 0.0023 18.3 8.5 0.035 14.6 9.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21229395|ref|NP_635317.1| - 0.0025 18.3 9.1 0.65 10.6 10.8 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21229395|ref|NP_635317.1| - 0.0032 18.3 13.1 0.065 14.2 5.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|21229395|ref|NP_635317.1| - 0.0083 16.6 7.7 0.055 14.0 2.4 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Dehalogenase PF13486.6 gi|21229395|ref|NP_635317.1| - 0.019 14.4 0.0 0.029 13.7 0.0 1.4 1 1 0 1 1 1 0 Reductive dehalogenase subunit Fer4_22 PF17179.4 gi|21229395|ref|NP_635317.1| - 0.023 15.5 1.9 0.75 10.7 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21229395|ref|NP_635317.1| - 0.033 14.7 3.9 0.62 10.7 1.0 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_21 PF14697.6 gi|21229395|ref|NP_635317.1| - 0.072 13.2 11.1 0.36 11.0 11.1 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21229395|ref|NP_635317.1| - 1.4 9.1 9.5 7.9 6.7 2.0 2.3 1 1 0 2 2 2 0 4Fe-4S dicluster domain Mrr_cat PF04471.12 gi|21229396|ref|NP_635318.1| - 2.8e-31 107.9 0.0 3.5e-31 107.6 0.0 1.1 1 0 0 1 1 1 1 Restriction endonuclease Mrr_cat_2 PF13156.6 gi|21229396|ref|NP_635318.1| - 1.8e-06 27.9 0.0 2.8e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease PAS_3 PF08447.12 gi|21229397|ref|NP_635319.1| - 1.2e-41 140.9 0.3 2.5e-21 75.7 0.4 3.5 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.12 gi|21229397|ref|NP_635319.1| - 2.3e-31 107.7 2.8 2.3e-31 107.7 2.8 1.9 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.7 gi|21229397|ref|NP_635319.1| - 2.5e-22 79.1 0.3 3.8e-08 33.5 0.0 3.6 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 gi|21229397|ref|NP_635319.1| - 5e-22 78.0 0.0 3.4e-06 27.0 0.0 4.4 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.10 gi|21229397|ref|NP_635319.1| - 4.2e-17 62.4 0.0 5.8e-09 36.2 0.0 4.6 4 1 0 4 4 4 2 PAS fold GAF_3 PF13492.6 gi|21229397|ref|NP_635319.1| - 6.2e-12 46.0 0.0 1.1e-11 45.1 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 gi|21229397|ref|NP_635319.1| - 2.5e-08 34.3 0.0 4.4e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|21229397|ref|NP_635319.1| - 2.4e-07 31.5 0.0 4.4e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 GAF domain PAS_11 PF14598.6 gi|21229397|ref|NP_635319.1| - 1.9e-05 24.8 0.0 0.096 12.8 0.0 3.3 3 0 0 3 3 3 2 PAS domain HWE_HK PF07536.14 gi|21229397|ref|NP_635319.1| - 0.00011 22.8 0.5 0.00022 21.8 0.5 1.5 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c PF02518.26 gi|21229397|ref|NP_635319.1| - 0.00046 20.7 0.0 0.0018 18.8 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|21229397|ref|NP_635319.1| - 0.043 13.8 0.0 13 6.0 0.0 3.5 3 0 0 3 3 3 0 PAS domain ELFV_dehydrog PF00208.21 gi|21229399|ref|NP_635321.1| - 1.5e-68 231.2 1.1 1.7e-68 231.0 1.1 1.0 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 2-Hacid_dh_C PF02826.19 gi|21229399|ref|NP_635321.1| - 8.2e-05 22.0 0.1 0.00015 21.2 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ldh_1_N PF00056.23 gi|21229399|ref|NP_635321.1| - 0.088 12.9 0.1 0.21 11.7 0.0 1.7 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain ELFV_dehydrog_N PF02812.18 gi|21229400|ref|NP_635322.1| - 3.6e-54 182.1 0.0 5.3e-54 181.6 0.0 1.2 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FAD_binding_3 PF01494.19 gi|21229401|ref|NP_635323.1| - 3.7e-14 52.8 6.1 1.1e-09 38.0 1.9 3.5 2 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|21229401|ref|NP_635323.1| - 4.7e-10 39.4 0.7 6.6e-10 38.9 0.7 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|21229401|ref|NP_635323.1| - 1e-07 31.5 0.0 1.9e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 gi|21229401|ref|NP_635323.1| - 7.3e-07 28.6 0.3 0.0005 19.2 0.0 2.4 2 1 0 2 2 2 2 Lycopene cyclase protein DAO PF01266.24 gi|21229401|ref|NP_635323.1| - 1.2e-06 28.4 4.5 3.3e-05 23.6 0.9 2.3 1 1 1 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|21229401|ref|NP_635323.1| - 7.4e-06 26.1 0.2 1.9e-05 24.8 0.2 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|21229401|ref|NP_635323.1| - 9.3e-06 24.6 0.3 1.6e-05 23.8 0.3 1.4 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|21229401|ref|NP_635323.1| - 6.5e-05 22.3 2.0 6.5e-05 22.3 2.0 2.3 2 2 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|21229401|ref|NP_635323.1| - 0.00023 20.4 0.7 0.00037 19.7 0.7 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|21229401|ref|NP_635323.1| - 0.0011 17.9 0.6 0.25 10.2 0.6 2.9 1 1 0 2 2 2 1 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|21229401|ref|NP_635323.1| - 0.0037 16.4 1.1 0.0064 15.6 1.1 1.3 1 0 0 1 1 1 1 FAD binding domain AlaDh_PNT_C PF01262.21 gi|21229401|ref|NP_635323.1| - 0.017 14.4 2.4 0.059 12.7 0.2 2.2 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|21229401|ref|NP_635323.1| - 0.12 12.3 0.3 0.22 11.4 0.3 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 gi|21229401|ref|NP_635323.1| - 0.16 11.2 0.2 0.23 10.6 0.2 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|21229401|ref|NP_635323.1| - 0.3 11.7 1.2 1 10.0 0.2 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase PAPS_reduct PF01507.19 gi|21229402|ref|NP_635324.1| - 3.4e-39 134.7 0.0 5.9e-39 133.9 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Fer4 PF00037.27 gi|21229402|ref|NP_635324.1| - 9.1e-08 31.6 21.3 3.9e-07 29.6 2.4 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21229402|ref|NP_635324.1| - 4.2e-07 30.0 10.9 2.1e-06 27.7 10.9 2.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229402|ref|NP_635324.1| - 6.4e-06 26.2 12.1 6.4e-06 26.2 12.1 2.6 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21229402|ref|NP_635324.1| - 6.8e-06 26.4 12.8 0.0061 17.0 0.5 3.7 4 0 0 4 4 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|21229402|ref|NP_635324.1| - 7e-06 26.2 2.5 2e-05 24.8 2.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|21229402|ref|NP_635324.1| - 3.9e-05 24.2 14.8 7.9e-05 23.2 13.0 2.6 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21229402|ref|NP_635324.1| - 0.00023 21.1 3.1 0.00023 21.1 3.1 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21229402|ref|NP_635324.1| - 0.00027 21.0 0.5 0.00027 21.0 0.5 3.3 4 0 0 4 4 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|21229402|ref|NP_635324.1| - 0.0011 19.5 11.7 0.015 15.8 0.3 3.4 4 0 0 4 4 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21229402|ref|NP_635324.1| - 0.0013 18.7 2.4 0.0013 18.7 2.4 3.5 3 0 0 3 3 2 2 4Fe-4S binding domain NAD_synthase PF02540.17 gi|21229402|ref|NP_635324.1| - 0.0019 17.4 0.0 0.003 16.7 0.0 1.2 1 0 0 1 1 1 1 NAD synthase Fer4_22 PF17179.4 gi|21229402|ref|NP_635324.1| - 0.0042 17.9 7.8 0.052 14.4 0.3 3.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21229402|ref|NP_635324.1| - 0.0045 17.9 11.9 0.015 16.2 2.2 3.9 2 1 2 4 4 4 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|21229402|ref|NP_635324.1| - 0.011 16.2 3.3 0.011 16.2 3.3 3.6 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|21229402|ref|NP_635324.1| - 0.033 15.1 20.0 0.057 14.4 6.3 3.1 2 0 0 2 2 2 0 4Fe-4S binding domain ATP_bind_3 PF01171.20 gi|21229402|ref|NP_635324.1| - 0.07 12.9 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 PP-loop family PKcGMP_CC PF16808.5 gi|21229403|ref|NP_635325.1| - 0.019 14.8 0.4 0.91 9.4 0.0 2.5 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase AI-2E_transport PF01594.16 gi|21229405|ref|NP_635327.1| - 3.5e-42 144.7 40.1 4.3e-42 144.4 40.1 1.0 1 0 0 1 1 1 1 AI-2E family transporter Rad33 PF08730.10 gi|21229405|ref|NP_635327.1| - 0.24 11.4 0.0 0.39 10.7 0.0 1.2 1 0 0 1 1 1 0 Rad33 PetG PF02529.15 gi|21229405|ref|NP_635327.1| - 0.53 10.2 7.6 0.87 9.5 0.4 3.2 3 0 0 3 3 3 0 Cytochrome B6-F complex subunit 5 tRNA-Thr_ED PF08915.11 gi|21229406|ref|NP_635328.1| - 2.5e-53 179.8 0.5 5.1e-53 178.8 0.5 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|21229406|ref|NP_635328.1| - 1.2e-17 63.8 1.7 1.2e-17 63.8 1.7 2.1 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|21229406|ref|NP_635328.1| - 2.1e-15 57.2 0.3 3.6e-15 56.4 0.3 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Heme_oxygenase PF01126.20 gi|21229406|ref|NP_635328.1| - 0.023 14.5 0.1 0.054 13.3 0.1 1.6 1 0 0 1 1 1 0 Heme oxygenase PTPlike_phytase PF14566.6 gi|21229406|ref|NP_635328.1| - 0.18 11.9 5.9 5.3 7.1 0.0 3.9 3 1 1 4 4 4 0 Inositol hexakisphosphate ResIII PF04851.15 gi|21229407|ref|NP_635329.1| - 9.5e-18 64.8 0.1 1.8e-17 63.9 0.1 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|21229407|ref|NP_635329.1| - 1.1e-07 32.1 0.0 7.1e-06 26.3 0.0 3.4 3 1 0 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|21229407|ref|NP_635329.1| - 0.00018 21.4 0.0 0.00095 19.0 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase SWI2_SNF2 PF18766.1 gi|21229407|ref|NP_635329.1| - 0.00023 20.9 0.0 0.00042 20.1 0.0 1.4 1 0 0 1 1 1 1 SWI2/SNF2 ATPase AAA_22 PF13401.6 gi|21229407|ref|NP_635329.1| - 0.00059 20.1 0.0 0.0016 18.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|21229407|ref|NP_635329.1| - 0.045 13.6 0.7 0.11 12.4 0.7 1.7 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA PF00004.29 gi|21229407|ref|NP_635329.1| - 0.046 14.1 0.3 0.33 11.4 0.3 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 gi|21229407|ref|NP_635329.1| - 0.073 12.8 0.0 0.27 11.0 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_16 PF13191.6 gi|21229407|ref|NP_635329.1| - 0.13 12.7 0.1 0.49 10.8 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain CPBP PF02517.16 gi|21229408|ref|NP_635330.1| - 0.0019 18.5 11.3 0.0019 18.5 11.3 2.4 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease DUF3995 PF13160.6 gi|21229408|ref|NP_635330.1| - 0.045 14.1 1.2 0.13 12.7 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3995) Zn_protease PF05618.11 gi|21229409|ref|NP_635331.1| - 2.3e-13 50.2 0.0 1e-12 48.1 0.0 1.8 1 1 0 1 1 1 1 Putative ATP-dependant zinc protease Pep_deformylase PF01327.21 gi|21229409|ref|NP_635331.1| - 0.015 14.9 0.1 0.37 10.4 0.1 2.1 1 1 0 1 1 1 0 Polypeptide deformylase Hydrolase_4 PF12146.8 gi|21229410|ref|NP_635332.1| - 3.8e-08 32.9 0.0 0.0015 17.9 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|21229410|ref|NP_635332.1| - 0.00019 22.1 0.0 0.002 18.8 0.0 1.9 1 1 1 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|21229410|ref|NP_635332.1| - 0.0063 16.2 0.1 0.14 11.7 0.0 2.2 1 1 1 2 2 2 1 alpha/beta hydrolase fold FSH1 PF03959.13 gi|21229410|ref|NP_635332.1| - 0.019 14.6 0.0 0.025 14.3 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Ser_hydrolase PF06821.13 gi|21229410|ref|NP_635332.1| - 0.11 12.4 0.0 1.5 8.7 0.0 2.1 1 1 0 1 1 1 0 Serine hydrolase Nitroreductase PF00881.24 gi|21229411|ref|NP_635333.1| - 8.8e-25 87.7 0.0 1.6e-24 86.9 0.0 1.4 2 0 0 2 2 1 1 Nitroreductase family Fer4 PF00037.27 gi|21229411|ref|NP_635333.1| - 1.8e-11 43.3 12.3 2.4e-07 30.3 4.1 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21229411|ref|NP_635333.1| - 2.5e-09 37.6 9.6 5e-09 36.6 9.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229411|ref|NP_635333.1| - 2.2e-08 34.1 7.5 4.3e-08 33.2 7.5 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|21229411|ref|NP_635333.1| - 5.9e-08 32.3 11.0 1.4e-05 24.9 2.3 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|21229411|ref|NP_635333.1| - 6.3e-08 32.6 10.6 8.8e-08 32.2 10.0 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|21229411|ref|NP_635333.1| - 6.2e-07 30.3 8.3 0.0024 18.7 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|21229411|ref|NP_635333.1| - 9.3e-07 28.7 15.3 9.3e-06 25.5 3.1 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain TM1586_NiRdase PF14512.6 gi|21229411|ref|NP_635333.1| - 1.3e-05 24.9 0.0 0.19 11.3 0.0 2.7 2 1 1 3 3 3 2 Putative TM nitroreductase Fer4_17 PF13534.6 gi|21229411|ref|NP_635333.1| - 6.8e-05 23.3 11.3 0.0031 18.0 11.3 2.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21229411|ref|NP_635333.1| - 0.00029 21.1 12.8 0.014 15.8 1.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21229411|ref|NP_635333.1| - 0.0032 17.6 13.0 0.006 16.7 12.2 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21229411|ref|NP_635333.1| - 0.007 16.8 14.6 0.34 11.4 13.8 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|21229411|ref|NP_635333.1| - 0.0097 16.4 11.6 0.013 16.0 2.4 2.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|21229411|ref|NP_635333.1| - 0.016 16.0 0.4 0.016 16.0 0.4 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|21229411|ref|NP_635333.1| - 0.11 13.4 8.0 3.5 8.5 0.8 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Clathrin_bdg PF15045.6 gi|21229411|ref|NP_635333.1| - 0.22 11.5 0.0 0.38 10.8 0.0 1.3 1 0 0 1 1 1 0 Clathrin-binding box of Aftiphilin, vesicle trafficking Fer4_3 PF12798.7 gi|21229411|ref|NP_635333.1| - 0.24 12.4 20.7 0.12 13.3 5.0 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|21229411|ref|NP_635333.1| - 0.71 10.1 11.2 32 4.7 11.5 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain DJ-1_PfpI PF01965.24 gi|21229412|ref|NP_635334.1| - 3.6e-29 101.7 0.0 4.7e-29 101.3 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family DUF3248 PF11609.8 gi|21229412|ref|NP_635334.1| - 0.032 14.1 0.0 0.054 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3248) Monooxygenase_B PF04744.12 gi|21229412|ref|NP_635334.1| - 0.14 10.9 0.0 0.21 10.4 0.0 1.1 1 0 0 1 1 1 0 Monooxygenase subunit B protein UL40 PF10682.9 gi|21229412|ref|NP_635334.1| - 0.18 11.5 0.0 0.24 11.1 0.0 1.1 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 Acetyltransf_9 PF13527.7 gi|21229413|ref|NP_635335.1| - 7.2e-10 39.0 0.0 1.1e-09 38.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|21229413|ref|NP_635335.1| - 1.4e-09 38.2 0.0 2.1e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|21229413|ref|NP_635335.1| - 1.3e-08 35.2 0.0 2e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|21229413|ref|NP_635335.1| - 8.7e-06 25.7 0.0 1.9e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|21229413|ref|NP_635335.1| - 0.012 15.7 0.0 0.022 14.9 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase MOZ_SAS PF01853.18 gi|21229413|ref|NP_635335.1| - 0.085 12.5 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 MOZ/SAS family HNH PF01844.23 gi|21229414|ref|NP_635336.1| - 1.5e-10 41.1 1.4 2.8e-10 40.2 1.4 1.5 1 0 0 1 1 1 1 HNH endonuclease ZF-HD_dimer PF04770.12 gi|21229414|ref|NP_635336.1| - 0.03 14.7 1.2 0.059 13.7 0.1 1.9 2 0 0 2 2 2 0 ZF-HD protein dimerisation region HNH_2 PF13391.6 gi|21229414|ref|NP_635336.1| - 0.084 13.0 0.1 0.26 11.4 0.1 1.7 1 1 0 1 1 1 0 HNH endonuclease 7TMR-DISM_7TM PF07695.11 gi|21229415|ref|NP_635337.1| - 0.0096 15.8 11.0 0.011 15.6 11.0 1.1 1 0 0 1 1 1 1 7TM diverse intracellular signalling AzlD PF05437.12 gi|21229415|ref|NP_635337.1| - 0.021 15.0 5.3 0.043 14.0 5.3 1.5 1 0 0 1 1 1 0 Branched-chain amino acid transport protein (AzlD) DUF4191 PF13829.6 gi|21229415|ref|NP_635337.1| - 0.15 11.3 5.1 0.17 11.2 5.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF2919 PF11143.8 gi|21229415|ref|NP_635337.1| - 2.9 8.2 12.6 5.5 7.3 12.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2919) DUF1129 PF06570.11 gi|21229415|ref|NP_635337.1| - 7.6 6.0 10.2 2 7.9 7.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) PRAI PF00697.22 gi|21229416|ref|NP_635338.1| - 8.2e-29 100.8 0.1 1e-28 100.5 0.1 1.1 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ER PF01133.17 gi|21229418|ref|NP_635340.1| - 0.014 15.4 0.4 0.016 15.2 0.4 1.1 1 0 0 1 1 1 0 Enhancer of rudimentary NUDIX PF00293.28 gi|21229419|ref|NP_635341.1| - 5.3e-13 49.1 0.1 7.8e-13 48.6 0.1 1.2 1 0 0 1 1 1 1 NUDIX domain Beta_helix PF13229.6 gi|21229420|ref|NP_635342.1| - 9.4e-109 360.3 221.6 7.4e-29 100.6 18.1 8.5 3 2 7 10 10 10 9 Right handed beta helix region NosD PF05048.13 gi|21229420|ref|NP_635342.1| - 6.6e-104 346.4 120.1 1.6e-37 129.1 17.5 6.5 1 1 6 7 7 7 7 Periplasmic copper-binding protein (NosD) PGF-CTERM PF18204.1 gi|21229420|ref|NP_635342.1| - 6.5e-07 29.1 0.3 6.5e-07 29.1 0.3 1.9 2 0 0 2 2 2 1 PGF-CTERM motif Pectate_lyase_3 PF12708.7 gi|21229420|ref|NP_635342.1| - 0.00048 20.0 70.7 0.082 12.7 9.1 7.4 3 3 2 7 7 7 5 Pectate lyase superfamily protein DUF3715 PF12509.8 gi|21229420|ref|NP_635342.1| - 0.0099 15.9 3.1 1.8 8.6 0.4 3.3 3 1 0 3 3 3 2 Protein of unknown function (DUF3715) TGBp3 PF02495.17 gi|21229420|ref|NP_635342.1| - 0.16 11.6 0.9 0.95 9.2 1.0 2.3 2 0 0 2 2 2 0 Triple gene block 3 MFS_1 PF07690.16 gi|21229421|ref|NP_635343.1| - 2.2e-22 79.5 43.0 7.5e-21 74.4 37.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|21229421|ref|NP_635343.1| - 1.5e-07 30.7 37.4 0.00013 21.0 15.9 2.6 1 1 2 3 3 3 2 MFS_1 like family BPD_transp_1 PF00528.22 gi|21229422|ref|NP_635344.1| - 2.1e-34 118.9 8.0 3.5e-34 118.2 5.4 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|21229422|ref|NP_635344.1| - 4.8e-07 29.6 0.1 4.8e-07 29.6 0.1 2.4 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|21229423|ref|NP_635345.1| - 5.5e-49 166.4 10.4 5.5e-49 166.4 10.4 1.6 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Renin_r PF07850.14 gi|21229423|ref|NP_635345.1| - 3.6 8.2 9.9 0.69 10.5 0.7 3.2 3 0 0 3 3 3 0 Renin receptor-like protein SBP_bac_5 PF00496.22 gi|21229424|ref|NP_635346.1| - 2e-82 277.2 4.4 2.4e-82 276.9 4.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle ABC_tran PF00005.27 gi|21229425|ref|NP_635347.1| - 5.1e-32 111.3 0.0 1.2e-31 110.0 0.0 1.6 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|21229425|ref|NP_635347.1| - 1.1e-09 38.1 0.0 1.8e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain oligo_HPY PF08352.12 gi|21229425|ref|NP_635347.1| - 1.9e-07 31.5 2.9 5.5e-06 26.8 2.9 2.4 1 1 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|21229425|ref|NP_635347.1| - 9.2e-06 25.7 1.0 0.077 12.8 0.1 2.6 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|21229425|ref|NP_635347.1| - 0.00017 21.2 0.0 0.00041 20.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|21229425|ref|NP_635347.1| - 0.00031 21.0 0.1 0.0022 18.3 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|21229425|ref|NP_635347.1| - 0.0013 19.2 0.0 0.0022 18.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain DUF3987 PF13148.6 gi|21229425|ref|NP_635347.1| - 0.039 13.0 0.0 0.069 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) ATP-synt_ab PF00006.25 gi|21229425|ref|NP_635347.1| - 0.068 12.8 0.0 0.074 12.7 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain RsgA_GTPase PF03193.16 gi|21229425|ref|NP_635347.1| - 0.14 12.0 0.1 0.29 11.0 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase Sigma54_activat PF00158.26 gi|21229425|ref|NP_635347.1| - 0.15 11.8 0.1 1 9.0 0.0 2.3 2 1 1 3 3 3 0 Sigma-54 interaction domain ATPase PF06745.13 gi|21229425|ref|NP_635347.1| - 0.16 11.3 0.4 0.5 9.7 0.1 1.9 2 0 0 2 2 2 0 KaiC AAA_19 PF13245.6 gi|21229425|ref|NP_635347.1| - 0.16 12.3 0.0 0.52 10.6 0.0 1.9 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|21229425|ref|NP_635347.1| - 0.18 11.9 0.2 0.45 10.6 0.1 1.6 2 0 0 2 2 2 0 Helicase HerA, central domain ABC_tran PF00005.27 gi|21229426|ref|NP_635348.1| - 1.2e-24 87.4 0.0 1.6e-24 87.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|21229426|ref|NP_635348.1| - 1.3e-12 48.0 0.2 2.5e-12 47.1 0.2 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|21229426|ref|NP_635348.1| - 8.4e-05 22.5 0.1 0.016 15.0 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|21229426|ref|NP_635348.1| - 0.00017 21.1 0.0 0.00038 20.0 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF4921 PF16268.5 gi|21229426|ref|NP_635348.1| - 0.099 11.4 0.0 0.14 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4921) NACHT PF05729.12 gi|21229426|ref|NP_635348.1| - 0.19 11.6 0.0 0.35 10.8 0.0 1.4 1 0 0 1 1 1 0 NACHT domain SDF PF00375.18 gi|21229427|ref|NP_635349.1| - 2.7e-112 375.7 41.1 3e-112 375.5 41.1 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family AFOR_C PF01314.18 gi|21229428|ref|NP_635350.1| - 9.1e-66 222.4 0.1 1.2e-65 222.0 0.1 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|21229428|ref|NP_635350.1| - 1.6e-60 204.4 0.0 2.6e-60 203.7 0.0 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Fer4 PF00037.27 gi|21229429|ref|NP_635351.1| - 6.5e-13 47.9 33.6 0.00013 21.6 2.9 5.1 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|21229429|ref|NP_635351.1| - 4.9e-12 46.3 23.1 0.0014 19.2 9.1 3.3 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|21229429|ref|NP_635351.1| - 1.5e-10 41.1 48.7 1.8e-05 24.8 13.2 3.1 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|21229429|ref|NP_635351.1| - 1.5e-10 41.0 30.3 0.0014 18.7 1.1 3.6 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|21229429|ref|NP_635351.1| - 1.6e-10 40.6 34.8 0.00023 21.1 3.2 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.6 gi|21229429|ref|NP_635351.1| - 5.9e-09 36.7 25.0 0.0025 18.7 0.5 4.4 1 1 4 5 5 5 3 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|21229429|ref|NP_635351.1| - 8e-09 35.1 35.7 0.00073 19.5 1.2 4.7 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|21229429|ref|NP_635351.1| - 1e-08 35.1 26.9 0.0002 21.4 8.8 3.1 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|21229429|ref|NP_635351.1| - 9.7e-07 28.8 28.2 0.0014 19.0 0.5 4.8 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_11 PF13247.6 gi|21229429|ref|NP_635351.1| - 1.8e-05 24.8 10.8 1.8e-05 24.8 10.8 2.6 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|21229429|ref|NP_635351.1| - 0.00011 22.9 43.5 0.033 15.1 5.9 4.4 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 gi|21229429|ref|NP_635351.1| - 0.00044 20.7 28.6 0.12 12.9 1.3 3.9 2 2 3 5 5 5 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|21229429|ref|NP_635351.1| - 0.013 15.9 29.8 0.72 10.3 7.9 3.9 2 2 2 4 4 4 0 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|21229429|ref|NP_635351.1| - 0.61 10.3 0.1 0.61 10.3 0.1 3.0 1 1 2 3 3 3 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_13 PF13370.6 gi|21229429|ref|NP_635351.1| - 1.7 9.3 23.8 0.47 11.0 2.8 3.6 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I GATase PF00117.28 gi|21229430|ref|NP_635352.1| - 4.7e-18 65.7 0.0 6.1e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|21229430|ref|NP_635352.1| - 8.4e-06 25.5 0.0 1.1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain HTS PF04204.16 gi|21229430|ref|NP_635352.1| - 0.00019 20.5 0.0 0.00026 20.0 0.0 1.1 1 0 0 1 1 1 1 Homoserine O-succinyltransferase DJ-1_PfpI PF01965.24 gi|21229430|ref|NP_635352.1| - 0.01 15.6 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family Peptidase_C26 PF07722.13 gi|21229430|ref|NP_635352.1| - 0.038 13.7 0.0 0.1 12.4 0.0 1.7 2 0 0 2 2 2 0 Peptidase C26 HAD_2 PF13419.6 gi|21229431|ref|NP_635353.1| - 7.8e-39 133.6 0.0 9.6e-39 133.3 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|21229431|ref|NP_635353.1| - 5.9e-15 56.1 0.1 4e-14 53.4 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|21229431|ref|NP_635353.1| - 8.1e-08 32.2 0.0 1.5e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|21229431|ref|NP_635353.1| - 8.7e-05 23.0 0.0 0.00015 22.2 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF1828 PF08861.10 gi|21229431|ref|NP_635353.1| - 0.08 13.2 0.1 0.16 12.3 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function DUF1828 TPR_2 PF07719.17 gi|21229432|ref|NP_635354.1| - 1.1e-44 147.0 10.5 2.1e-09 36.8 0.1 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_1 PF00515.28 gi|21229432|ref|NP_635354.1| - 5.1e-42 140.0 12.6 3.7e-10 39.2 0.1 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21229432|ref|NP_635354.1| - 2e-30 102.4 6.8 1.1e-05 25.3 0.1 6.5 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21229432|ref|NP_635354.1| - 2.4e-30 104.9 3.1 5.2e-11 43.0 0.0 4.9 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21229432|ref|NP_635354.1| - 1e-29 101.9 11.4 1e-09 37.9 0.1 6.3 3 1 3 6 6 6 6 TPR repeat TPR_17 PF13431.6 gi|21229432|ref|NP_635354.1| - 3.5e-28 95.9 4.9 1.4e-06 28.2 0.0 6.7 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21229432|ref|NP_635354.1| - 2.2e-26 92.0 9.5 1.5e-09 38.0 0.3 5.5 2 2 4 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21229432|ref|NP_635354.1| - 1.3e-25 87.8 1.5 0.00011 22.7 0.1 6.2 3 1 3 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21229432|ref|NP_635354.1| - 1.9e-24 85.6 0.0 6.9e-06 26.1 0.0 5.2 3 1 1 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21229432|ref|NP_635354.1| - 1.5e-23 83.1 0.7 3.3e-09 37.1 0.0 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21229432|ref|NP_635354.1| - 1.3e-21 76.6 0.9 2.3e-08 34.1 0.0 5.2 3 1 3 6 6 6 6 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|21229432|ref|NP_635354.1| - 2.6e-15 56.0 3.9 0.086 13.5 0.0 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|21229432|ref|NP_635354.1| - 1.2e-12 47.6 8.3 0.015 15.4 0.0 6.0 5 1 1 6 6 6 3 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|21229432|ref|NP_635354.1| - 7.4e-12 44.7 4.9 0.29 11.1 0.2 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|21229432|ref|NP_635354.1| - 1.8e-10 40.9 0.9 7.3e-05 22.8 0.4 4.2 1 1 2 3 3 3 2 Putative TPR-like repeat NARP1 PF12569.8 gi|21229432|ref|NP_635354.1| - 2.1e-10 40.2 0.5 0.0015 17.5 0.0 3.6 2 1 1 4 4 4 3 NMDA receptor-regulated protein 1 TPR_7 PF13176.6 gi|21229432|ref|NP_635354.1| - 3.8e-10 39.1 4.3 0.14 12.2 0.0 6.0 4 1 2 6 6 6 2 Tetratricopeptide repeat DUF3856 PF12968.7 gi|21229432|ref|NP_635354.1| - 1.1e-07 32.0 2.7 1.4 9.0 0.1 5.8 3 1 2 6 6 6 2 Domain of Unknown Function (DUF3856) ANAPC5 PF12862.7 gi|21229432|ref|NP_635354.1| - 4.1e-07 30.0 1.2 0.26 11.4 0.0 4.8 2 2 4 6 6 6 2 Anaphase-promoting complex subunit 5 TPR_3 PF07720.12 gi|21229432|ref|NP_635354.1| - 5.6e-07 29.4 4.7 0.21 11.6 0.0 5.6 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_21 PF09976.9 gi|21229432|ref|NP_635354.1| - 1.4e-06 28.2 0.4 1.3 8.7 0.0 3.7 2 1 1 3 3 3 3 Tetratricopeptide repeat-like domain TPR_15 PF13429.6 gi|21229432|ref|NP_635354.1| - 2.6e-06 26.9 0.4 0.00027 20.3 0.0 3.3 1 1 3 4 4 4 1 Tetratricopeptide repeat TPR_20 PF14561.6 gi|21229432|ref|NP_635354.1| - 5.1e-06 26.7 0.7 0.12 12.7 0.0 4.0 3 1 2 5 5 5 2 Tetratricopeptide repeat BTAD PF03704.17 gi|21229432|ref|NP_635354.1| - 1.2e-05 25.8 0.7 0.0055 17.1 0.0 3.7 2 2 2 4 4 4 2 Bacterial transcriptional activator domain Coatomer_E PF04733.14 gi|21229432|ref|NP_635354.1| - 5.8e-05 22.7 1.0 0.54 9.6 0.0 4.0 3 1 0 4 4 4 1 Coatomer epsilon subunit PPR PF01535.20 gi|21229432|ref|NP_635354.1| - 0.00012 22.1 2.9 4.2 7.8 0.0 5.3 5 0 0 5 5 5 1 PPR repeat SHNi-TPR PF10516.9 gi|21229432|ref|NP_635354.1| - 0.00021 20.7 1.7 0.71 9.4 0.0 4.0 4 0 0 4 4 4 1 SHNi-TPR DUF5113 PF17140.4 gi|21229432|ref|NP_635354.1| - 0.00025 20.9 1.2 17 5.2 0.0 5.4 3 2 3 6 6 6 0 Domain of unknown function (DUF5113) TPR_4 PF07721.14 gi|21229432|ref|NP_635354.1| - 0.00098 19.5 0.0 37 5.4 0.0 4.4 5 0 0 5 5 4 0 Tetratricopeptide repeat MIT PF04212.18 gi|21229432|ref|NP_635354.1| - 0.0014 18.7 4.4 18 5.5 0.1 5.2 6 0 0 6 6 5 0 MIT (microtubule interacting and transport) domain ChAPs PF09295.10 gi|21229432|ref|NP_635354.1| - 0.002 17.2 0.0 0.0036 16.4 0.0 1.3 1 0 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_5 PF12688.7 gi|21229432|ref|NP_635354.1| - 0.0032 17.7 0.0 0.38 11.0 0.0 3.2 2 2 1 3 3 3 1 Tetratrico peptide repeat Wzy_C_2 PF11846.8 gi|21229432|ref|NP_635354.1| - 0.034 14.1 0.1 4.1 7.3 0.0 2.8 2 1 1 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal Paf67 PF10255.9 gi|21229432|ref|NP_635354.1| - 0.05 12.6 0.0 2.9 6.8 0.0 2.8 3 1 0 3 3 3 0 RNA polymerase I-associated factor PAF67 Alkyl_sulf_dimr PF14863.6 gi|21229432|ref|NP_635354.1| - 0.11 12.9 0.3 8 6.9 0.0 3.2 3 0 0 3 3 3 0 Alkyl sulfatase dimerisation PPR_1 PF12854.7 gi|21229432|ref|NP_635354.1| - 1.3 8.8 3.0 4.4 7.1 0.0 3.1 4 0 0 4 4 4 0 PPR repeat NAD_binding_8 PF13450.6 gi|21229433|ref|NP_635355.1| - 6e-19 68.1 0.1 1.3e-18 67.0 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 gi|21229433|ref|NP_635355.1| - 3.2e-17 63.0 0.0 7.5e-17 61.8 0.0 1.7 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.24 gi|21229433|ref|NP_635355.1| - 2.4e-11 43.4 0.4 1e-09 38.0 0.7 2.5 3 0 0 3 3 3 1 FAD binding domain DAO PF01266.24 gi|21229433|ref|NP_635355.1| - 3.4e-10 40.0 0.1 3.7e-07 30.1 0.3 2.4 3 0 0 3 3 3 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|21229433|ref|NP_635355.1| - 2.2e-09 37.2 0.1 3.4e-09 36.6 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|21229433|ref|NP_635355.1| - 1e-07 31.1 0.8 5.1e-07 28.7 0.2 2.3 2 1 0 3 3 3 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|21229433|ref|NP_635355.1| - 5e-06 26.0 0.3 9.1e-06 25.1 0.3 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|21229433|ref|NP_635355.1| - 5.7e-06 25.8 0.1 1.5e-05 24.4 0.1 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|21229433|ref|NP_635355.1| - 8.8e-06 25.1 0.4 2.2e-05 23.8 0.2 1.7 2 0 0 2 2 2 1 Thi4 family GDI PF00996.18 gi|21229433|ref|NP_635355.1| - 2.5e-05 23.0 0.5 6.3e-05 21.7 0.5 1.7 1 0 0 1 1 1 1 GDP dissociation inhibitor Pyr_redox_3 PF13738.6 gi|21229433|ref|NP_635355.1| - 0.00019 20.8 0.5 0.0029 16.9 0.3 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|21229433|ref|NP_635355.1| - 0.00021 20.5 0.5 0.00052 19.2 0.2 1.8 3 0 0 3 3 3 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|21229433|ref|NP_635355.1| - 0.00047 20.7 1.9 0.00051 20.6 0.2 1.9 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|21229433|ref|NP_635355.1| - 0.0049 16.0 0.0 0.007 15.5 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 gi|21229433|ref|NP_635355.1| - 0.034 13.4 0.0 0.057 12.7 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 gi|21229433|ref|NP_635355.1| - 0.14 11.0 0.2 0.22 10.3 0.2 1.2 1 0 0 1 1 1 0 Tryptophan halogenase ApbA PF02558.16 gi|21229433|ref|NP_635355.1| - 0.25 11.0 0.7 0.53 9.9 0.7 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Rieske PF00355.26 gi|21229434|ref|NP_635356.1| - 1.3e-17 63.5 0.0 1.7e-17 63.1 0.0 1.2 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|21229434|ref|NP_635356.1| - 9.5e-09 35.1 0.0 1.2e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain B12-binding_2 PF02607.17 gi|21229436|ref|NP_635358.1| - 1.4e-21 76.7 0.2 3.2e-21 75.6 0.0 1.8 2 0 0 2 2 2 1 B12 binding domain B12-binding PF02310.19 gi|21229436|ref|NP_635358.1| - 4.3e-15 55.8 0.2 8.2e-15 54.9 0.2 1.4 1 0 0 1 1 1 1 B12 binding domain RsbU_N PF08673.10 gi|21229436|ref|NP_635358.1| - 0.041 14.0 0.0 0.15 12.1 0.0 2.1 2 1 0 2 2 2 0 Phosphoserine phosphatase RsbU, N-terminal domain Blt1 PF12754.7 gi|21229436|ref|NP_635358.1| - 0.096 13.0 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Blt1 N-terminal domain MtmB PF05369.12 gi|85666103|ref|NP_635359.2| - 1.1e-232 772.6 1.7 1.3e-232 772.4 1.7 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB DUF2769 PF10967.8 gi|21229439|ref|NP_635361.1| - 3.3e-14 53.3 8.5 4.5e-14 52.8 8.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) zf-C4_ClpX PF06689.13 gi|21229439|ref|NP_635361.1| - 0.7 9.8 10.0 1.3 8.9 3.1 2.4 2 0 0 2 2 2 0 ClpX C4-type zinc finger SPT_ssu-like PF11779.8 gi|21229441|ref|NP_635363.1| - 0.029 14.0 0.1 0.058 13.0 0.1 1.4 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like TPR_1 PF00515.28 gi|21229444|ref|NP_635366.1| - 5.7e-48 158.9 14.7 7e-08 32.0 0.2 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|21229444|ref|NP_635366.1| - 8e-42 138.0 16.5 4.3e-07 29.5 0.3 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|21229444|ref|NP_635366.1| - 6e-38 128.3 18.0 1e-08 34.7 0.6 8.1 4 3 4 8 8 8 7 TPR repeat TPR_17 PF13431.6 gi|21229444|ref|NP_635366.1| - 3.6e-34 114.7 9.3 0.00034 20.8 0.1 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|21229444|ref|NP_635366.1| - 4.7e-31 107.2 12.0 3.7e-10 40.3 0.8 5.7 2 2 5 7 7 7 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|21229444|ref|NP_635366.1| - 8.1e-31 103.6 13.4 2.6e-08 33.4 0.2 7.7 8 0 0 8 8 7 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|21229444|ref|NP_635366.1| - 2.8e-28 96.2 14.3 3.3e-06 27.4 0.7 8.2 1 1 7 8 8 8 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|21229444|ref|NP_635366.1| - 8.5e-24 83.5 5.2 2.7e-07 30.7 0.3 5.2 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_19 PF14559.6 gi|21229444|ref|NP_635366.1| - 6.8e-21 74.6 11.6 3.1e-06 27.6 0.1 5.5 2 2 3 6 6 6 6 Tetratricopeptide repeat TPR_12 PF13424.6 gi|21229444|ref|NP_635366.1| - 1.2e-20 73.6 9.0 8.3e-05 22.8 2.5 5.7 2 1 5 7 7 7 6 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|21229444|ref|NP_635366.1| - 3.5e-17 62.4 5.3 8.6e-06 25.9 0.0 3.5 2 1 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|21229444|ref|NP_635366.1| - 1.1e-11 43.8 4.7 0.0024 17.8 0.1 6.3 7 0 0 7 7 6 1 Tetratricopeptide repeat BTAD PF03704.17 gi|21229444|ref|NP_635366.1| - 4.6e-09 36.8 3.7 0.029 14.8 0.1 3.5 2 1 1 3 3 3 2 Bacterial transcriptional activator domain TPR_15 PF13429.6 gi|21229444|ref|NP_635366.1| - 7.6e-09 35.2 10.2 1e-05 24.9 2.0 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|21229444|ref|NP_635366.1| - 1.2e-08 34.8 10.1 1.2 9.3 0.0 6.2 6 1 1 7 7 6 4 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.6 gi|21229444|ref|NP_635366.1| - 2e-08 34.4 6.7 5.7 7.8 0.0 7.9 8 0 0 8 8 8 1 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|21229444|ref|NP_635366.1| - 8.5e-08 32.2 0.1 0.007 16.4 0.0 3.4 1 1 2 3 3 3 3 Putative TPR-like repeat TPR_10 PF13374.6 gi|21229444|ref|NP_635366.1| - 8.4e-07 28.7 8.8 0.16 11.9 0.4 6.4 6 1 1 7 7 6 1 Tetratricopeptide repeat DUF3856 PF12968.7 gi|21229444|ref|NP_635366.1| - 8.4e-06 25.9 10.2 0.27 11.3 0.4 6.0 2 1 2 5 5 4 3 Domain of Unknown Function (DUF3856) TPR_20 PF14561.6 gi|21229444|ref|NP_635366.1| - 0.0001 22.6 6.1 0.45 10.9 0.3 4.8 2 2 3 5 5 5 2 Tetratricopeptide repeat Rapsyn_N PF10579.9 gi|21229444|ref|NP_635366.1| - 0.0012 18.9 0.1 0.95 9.6 0.0 3.8 3 1 1 4 4 4 1 Rapsyn N-terminal myristoylation and linker region Alkyl_sulf_dimr PF14863.6 gi|21229444|ref|NP_635366.1| - 0.0039 17.7 0.4 9.3 6.7 0.0 4.4 2 2 1 3 3 3 0 Alkyl sulfatase dimerisation ANAPC5 PF12862.7 gi|21229444|ref|NP_635366.1| - 0.01 15.9 0.4 18 5.5 0.1 3.7 2 2 1 3 3 3 0 Anaphase-promoting complex subunit 5 Coatomer_E PF04733.14 gi|21229444|ref|NP_635366.1| - 0.048 13.1 0.1 3.5 7.0 0.0 2.6 2 1 0 2 2 2 0 Coatomer epsilon subunit TPR_4 PF07721.14 gi|21229444|ref|NP_635366.1| - 0.25 12.1 1.4 59 4.7 0.6 4.2 5 0 0 5 5 3 0 Tetratricopeptide repeat HTH_Bact PF18768.1 gi|21229444|ref|NP_635366.1| - 1 9.0 2.8 1.4e+02 2.1 0.0 4.8 6 0 0 6 6 6 0 Helix-turn-helix bacterial domain NARP1 PF12569.8 gi|21229444|ref|NP_635366.1| - 1.2 7.9 28.4 1.6 7.5 0.1 5.2 1 1 4 5 5 4 0 NMDA receptor-regulated protein 1 MIT PF04212.18 gi|21229444|ref|NP_635366.1| - 2.1 8.5 9.2 7.4 6.7 0.1 4.7 5 0 0 5 5 4 0 MIT (microtubule interacting and transport) domain HTH_32 PF13565.6 gi|21229445|ref|NP_635367.1| - 7.4e-16 58.5 0.1 2.4e-13 50.5 0.0 2.1 2 0 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 gi|21229445|ref|NP_635367.1| - 1.2e-12 47.7 0.1 9.7e-12 44.7 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|21229445|ref|NP_635367.1| - 7e-08 32.0 0.1 5.3e-06 26.1 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|21229445|ref|NP_635367.1| - 0.0089 16.1 0.0 0.2 11.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|21229445|ref|NP_635367.1| - 0.048 13.6 0.2 0.45 10.5 0.0 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain DDE_3 PF13358.6 gi|21229446|ref|NP_635368.1| - 1.9e-28 99.0 0.0 2.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease Neurensin PF14927.6 gi|21229447|ref|NP_635369.1| - 2.3 7.9 4.3 2.5 7.8 0.1 2.0 1 1 1 2 2 2 0 Neurensin DUF3822 PF12864.7 gi|21229449|ref|NP_635371.1| - 0.066 12.4 0.0 0.09 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3822) PRiA4_ORF3 PF07929.11 gi|21229452|ref|NP_635374.1| - 8.4e-65 217.7 0.6 9.5e-65 217.5 0.6 1.0 1 0 0 1 1 1 1 Plasmid pRiA4b ORF-3-like protein DUF1315 PF07023.12 gi|21229452|ref|NP_635374.1| - 0.051 13.7 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1315) CBM_10 PF02013.16 gi|21229452|ref|NP_635374.1| - 0.065 13.7 0.0 0.16 12.5 0.0 1.6 1 0 0 1 1 1 0 Cellulose or protein binding domain DUF3874 PF12990.7 gi|21229454|ref|NP_635376.1| - 0.16 12.3 0.1 8.9 6.7 0.1 2.4 2 0 0 2 2 2 0 Domain of unknonw function from B. Theta Gene description (DUF3874) DUF2256 PF10013.9 gi|21229454|ref|NP_635376.1| - 4.3 7.5 5.7 26 5.0 0.5 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) RAMPs PF03787.15 gi|21229455|ref|NP_635377.1| - 2.3e-06 27.8 2.9 5.5e-06 26.6 2.0 2.1 2 1 0 2 2 2 1 RAMP superfamily CelTOS PF18659.1 gi|21229456|ref|NP_635378.1| - 0.027 14.9 1.4 0.24 11.9 0.1 2.0 1 1 1 2 2 2 0 Cell-traversal protein for ookinetes and sporozoites DUF973 PF06157.11 gi|21229456|ref|NP_635378.1| - 0.064 12.3 0.0 0.076 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) PMC2NT PF08066.12 gi|21229456|ref|NP_635378.1| - 0.17 12.6 1.0 5.6 7.7 1.0 2.1 1 1 0 1 1 1 0 PMC2NT (NUC016) domain RAMPs PF03787.15 gi|21229457|ref|NP_635379.1| - 1.2e-23 84.3 0.1 1.7e-23 83.8 0.1 1.3 1 0 0 1 1 1 1 RAMP superfamily Cas_Cmr3 PF09700.10 gi|21229457|ref|NP_635379.1| - 0.11 11.9 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr3) RAMPs PF03787.15 gi|21229459|ref|NP_635381.1| - 0.00015 21.9 1.4 0.0013 18.9 1.4 2.3 1 1 0 1 1 1 1 RAMP superfamily RAMPs PF03787.15 gi|21229460|ref|NP_635382.1| - 8.3e-18 65.2 2.9 1.6e-17 64.3 0.2 2.1 2 0 0 2 2 2 1 RAMP superfamily Cas6b_C PF17262.2 gi|21229461|ref|NP_635383.1| - 8.3e-41 138.7 0.0 1.3e-40 138.0 0.0 1.3 1 0 0 1 1 1 1 Cas6b C-terminal domain Cas6b_N PF17955.1 gi|21229461|ref|NP_635383.1| - 1e-32 112.3 0.0 1.8e-32 111.5 0.0 1.4 1 0 0 1 1 1 1 Cas6b N-terminal domain GIIM PF08388.11 gi|21229462|ref|NP_635384.1| - 4.5e-05 23.4 0.0 7e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Group II intron, maturase-specific domain Lipoprotein_2 PF00921.17 gi|21229462|ref|NP_635384.1| - 0.088 12.4 5.1 0.2 11.2 5.1 1.5 1 1 0 1 1 1 0 Borrelia lipoprotein NOG1 PF06858.14 gi|21229465|ref|NP_635387.1| - 0.15 11.9 0.2 1.7 8.5 0.0 2.0 1 1 1 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) Toxin_19 PF08088.12 gi|21229466|ref|NP_635388.1| - 0.0013 18.8 6.1 0.095 12.8 1.4 2.1 2 0 0 2 2 2 2 Conotoxin I-superfamily YoaP PF14268.6 gi|21229473|ref|NP_635395.1| - 1.1e-15 56.8 0.0 2e-15 56.0 0.0 1.5 1 0 0 1 1 1 1 YoaP-like Acetyltransf_CG PF14542.6 gi|21229473|ref|NP_635395.1| - 0.0004 20.5 0.1 0.0011 19.1 0.0 1.7 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Acetyltransf_1 PF00583.25 gi|21229473|ref|NP_635395.1| - 0.00085 19.5 0.0 0.0022 18.2 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|21229473|ref|NP_635395.1| - 0.009 16.0 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|21229473|ref|NP_635395.1| - 0.037 14.5 0.1 0.062 13.7 0.1 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_mazei_Go1_uid57893/NC_003901.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_mazei_Go1_uid57893/NC_003901.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_mazei_Go1_uid57893/NC_003901.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_mazei_Go1_uid57893/NC_003901.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 16:17:06 2019 # [ok]