# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Transposase_20 PF02371.16 gi|73663827|ref|YP_300073.1| - 0.0019 18.5 0.0 0.0024 18.1 0.0 1.2 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DUF1699 PF08004.11 gi|73663828|ref|YP_300074.1| - 1.5e-61 205.8 3.4 1.7e-61 205.6 3.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|73663828|ref|YP_300074.1| - 0.0061 16.8 0.1 0.0089 16.3 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) OrfB_IS605 PF01385.19 gi|73663829|ref|YP_300075.1| - 7.5e-26 90.7 2.1 1e-25 90.3 1.3 1.6 2 0 0 2 2 2 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73663829|ref|YP_300075.1| - 1e-22 79.8 0.5 2.3e-22 78.7 0.5 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zf-piccolo PF05715.13 gi|73663829|ref|YP_300075.1| - 0.00086 19.4 0.9 0.0018 18.4 0.9 1.5 1 0 0 1 1 1 1 Piccolo Zn-finger HypA PF01155.19 gi|73663829|ref|YP_300075.1| - 0.085 12.9 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|73663829|ref|YP_300075.1| - 0.11 12.5 0.6 0.21 11.6 0.6 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-UDP PF14569.6 gi|73663829|ref|YP_300075.1| - 0.44 10.7 1.9 2.4 8.4 1.9 2.1 1 1 0 1 1 1 0 Zinc-binding RING-finger zf-RanBP PF00641.18 gi|73663829|ref|YP_300075.1| - 2 7.8 7.9 6.8 6.1 0.3 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Rubredoxin PF00301.20 gi|73663829|ref|YP_300075.1| - 2.4 8.3 5.1 2.4 8.3 1.0 2.3 2 0 0 2 2 2 0 Rubredoxin Polysacc_synt PF01943.17 gi|73663830|ref|YP_300076.1| - 4.2e-07 29.6 33.6 4.2e-07 29.6 33.6 2.5 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein DUF354 PF04007.12 gi|73663831|ref|YP_300077.1| - 3.4e-09 36.2 0.3 4.5e-09 35.8 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Hydrolase_3 PF08282.12 gi|73663831|ref|YP_300077.1| - 0.14 11.9 0.6 0.26 11.0 0.4 1.5 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase SQHop_cyclase_C PF13243.6 gi|73663832|ref|YP_300078.1| - 0.0064 15.6 0.1 0.28 10.2 0.0 2.5 2 1 0 2 2 2 2 Squalene-hopene cyclase C-terminal domain Glycos_transf_1 PF00534.20 gi|73663833|ref|YP_300079.1| - 2e-30 105.6 0.0 6.8e-30 103.9 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73663833|ref|YP_300079.1| - 2.7e-23 82.9 0.0 4.3e-23 82.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73663833|ref|YP_300079.1| - 1.3e-10 41.6 0.0 2.7e-10 40.5 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|73663833|ref|YP_300079.1| - 5.3e-06 26.7 0.0 2.7e-05 24.4 0.0 2.2 3 0 0 3 3 3 1 Glycosyl transferases group 1 AAA_31 PF13614.6 gi|73663834|ref|YP_300080.1| - 1e-48 165.6 0.0 1.5e-48 165.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|73663834|ref|YP_300080.1| - 6.1e-20 71.6 0.0 7.7e-20 71.2 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 gi|73663834|ref|YP_300080.1| - 2.1e-11 43.8 0.1 5.5e-08 32.6 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ParA PF10609.9 gi|73663834|ref|YP_300080.1| - 3.3e-10 39.8 1.0 1.3e-09 37.8 1.0 2.0 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 gi|73663834|ref|YP_300080.1| - 1.5e-08 34.2 0.2 5.4e-07 29.2 0.2 2.1 1 1 0 1 1 1 1 ATPase MipZ CBP_BcsQ PF06564.12 gi|73663834|ref|YP_300080.1| - 1.5e-07 31.1 0.0 1.8e-06 27.6 0.0 2.1 2 1 0 2 2 2 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|73663834|ref|YP_300080.1| - 2.4e-07 30.3 0.7 2.8e-05 23.5 0.3 2.3 2 0 0 2 2 2 2 Anion-transporting ATPase VirC1 PF07015.11 gi|73663834|ref|YP_300080.1| - 0.00077 18.8 0.1 0.0028 17.0 0.1 1.8 2 0 0 2 2 2 1 VirC1 protein SRP54 PF00448.22 gi|73663834|ref|YP_300080.1| - 0.001 18.8 0.1 0.13 11.8 0.1 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_25 PF13481.6 gi|73663834|ref|YP_300080.1| - 0.15 11.6 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain MOZART1 PF12554.8 gi|73663835|ref|YP_300081.1| - 0.18 11.6 0.0 0.25 11.1 0.0 1.2 1 0 0 1 1 1 0 Mitotic-spindle organizing gamma-tubulin ring associated OrfB_IS605 PF01385.19 gi|73663836|ref|YP_300082.1| - 1.6e-27 96.1 0.4 3e-27 95.2 0.4 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73663836|ref|YP_300082.1| - 4.2e-21 74.6 0.3 7.6e-21 73.8 0.3 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73663836|ref|YP_300082.1| - 1.9e-20 72.1 0.3 3.4e-20 71.2 0.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73663836|ref|YP_300082.1| - 0.00052 20.1 0.7 0.0011 19.0 0.7 1.5 1 0 0 1 1 1 1 Piccolo Zn-finger HypA PF01155.19 gi|73663836|ref|YP_300082.1| - 0.073 13.1 0.3 0.14 12.2 0.3 1.6 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|73663836|ref|YP_300082.1| - 0.15 12.1 0.5 0.27 11.3 0.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-RanBP PF00641.18 gi|73663836|ref|YP_300082.1| - 6.9 6.1 8.4 17 4.9 0.4 2.6 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Glycos_transf_2 PF00535.26 gi|73663837|ref|YP_300083.1| - 8.3e-21 74.5 0.0 1.3e-20 73.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73663837|ref|YP_300083.1| - 4.3e-08 33.3 0.0 5.4e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|73663837|ref|YP_300083.1| - 0.00068 20.1 0.0 0.0012 19.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|73663837|ref|YP_300083.1| - 0.02 14.4 0.0 0.032 13.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 Laminin_G_3 PF13385.6 gi|73663838|ref|YP_300084.1| - 5.5e-25 88.3 10.5 6.8e-14 52.3 1.1 5.6 4 2 0 4 4 4 2 Concanavalin A-like lectin/glucanases superfamily PKD PF00801.20 gi|73663838|ref|YP_300084.1| - 4e-19 68.2 13.0 1.9e-12 46.8 4.2 6.2 9 0 0 9 9 9 2 PKD domain DUF4399 PF14347.6 gi|73663838|ref|YP_300084.1| - 7.5e-07 29.4 7.1 6.4 7.2 0.0 8.5 9 0 0 9 9 9 1 Domain of unknown function (DUF4399) KTSC PF13619.6 gi|73663838|ref|YP_300084.1| - 0.00068 19.4 0.1 77 3.2 0.0 5.8 5 0 0 5 5 5 0 KTSC domain ASH PF15780.5 gi|73663838|ref|YP_300084.1| - 0.0059 16.8 18.6 6.7 7.0 0.1 7.3 5 1 2 7 7 7 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin PKD_3 PF16820.5 gi|73663838|ref|YP_300084.1| - 0.76 9.6 3.1 4.8 7.0 0.2 3.6 4 0 0 4 4 4 0 PKD-like domain CopC PF04234.12 gi|73663838|ref|YP_300084.1| - 0.81 10.8 18.4 0.29 12.2 0.4 5.9 7 2 0 7 7 7 0 CopC domain OrfB_IS605 PF01385.19 gi|73663839|ref|YP_300085.1| - 7.3e-26 90.8 1.3 1.8e-25 89.5 1.3 1.6 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73663839|ref|YP_300085.1| - 1.8e-22 79.1 0.5 3.6e-22 78.0 0.5 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73663839|ref|YP_300085.1| - 9.4e-21 73.0 0.5 2.1e-20 71.9 0.5 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73663839|ref|YP_300085.1| - 0.0024 18.0 2.6 0.0026 17.9 0.9 1.9 2 0 0 2 2 2 1 Piccolo Zn-finger HypA PF01155.19 gi|73663839|ref|YP_300085.1| - 0.13 12.3 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RanBP PF00641.18 gi|73663839|ref|YP_300085.1| - 3.3 7.1 7.8 9.1 5.7 0.3 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Y1_Tnp PF01797.16 gi|73663840|ref|YP_300086.1| - 3.9e-26 91.5 1.5 4.2e-26 91.4 1.5 1.0 1 0 0 1 1 1 1 Transposase IS200 like Castor1_N PF18700.1 gi|73663841|ref|YP_300087.1| - 0.94 9.3 4.2 0.68 9.8 0.6 2.6 2 0 0 2 2 2 0 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Hexapep PF00132.24 gi|73663842|ref|YP_300088.1| - 1.2e-17 62.9 24.0 7.8e-09 34.9 7.3 3.6 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73663842|ref|YP_300088.1| - 9.2e-10 38.1 20.4 7.7e-06 25.6 7.6 3.6 3 0 0 3 3 3 3 Hexapeptide repeat of succinyl-transferase Phage_integrase PF00589.22 gi|73663843|ref|YP_300089.1| - 1.2e-07 31.7 0.3 6.8e-07 29.2 0.3 1.9 1 1 0 1 1 1 1 Phage integrase family CPSase_L_D3 PF02787.19 gi|73663843|ref|YP_300089.1| - 0.084 13.2 0.2 0.17 12.2 0.2 1.5 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DUF4494 PF14902.6 gi|73663843|ref|YP_300089.1| - 0.13 12.1 0.9 0.23 11.3 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4494) Cdc6_C PF09079.11 gi|73663844|ref|YP_300090.1| - 6.7e-13 48.4 0.1 1.9e-12 47.0 0.1 1.7 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA PF00004.29 gi|73663844|ref|YP_300090.1| - 1.8e-08 34.9 0.0 3.6e-08 33.9 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|73663844|ref|YP_300090.1| - 1.8e-05 25.0 0.0 4e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|73663844|ref|YP_300090.1| - 8e-05 22.6 0.0 0.00016 21.6 0.0 1.5 1 0 0 1 1 1 1 NACHT domain ATPase_2 PF01637.18 gi|73663844|ref|YP_300090.1| - 0.00039 20.4 5.2 0.0023 17.9 0.9 2.6 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|73663844|ref|YP_300090.1| - 0.00048 20.6 0.0 0.0024 18.3 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain Ribosomal_L7Ae PF01248.26 gi|73663844|ref|YP_300090.1| - 0.0028 17.3 0.2 0.0085 15.8 0.2 1.8 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AAA_2 PF07724.14 gi|73663844|ref|YP_300090.1| - 0.0085 16.2 0.0 0.016 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RNA_helicase PF00910.22 gi|73663844|ref|YP_300090.1| - 0.011 16.1 0.6 0.64 10.4 0.3 3.1 2 1 0 2 2 2 0 RNA helicase TniB PF05621.11 gi|73663844|ref|YP_300090.1| - 0.012 15.0 0.1 0.023 14.1 0.1 1.4 1 0 0 1 1 1 0 Bacterial TniB protein NB-ARC PF00931.22 gi|73663844|ref|YP_300090.1| - 0.069 12.3 0.2 0.25 10.5 0.1 2.1 1 1 1 2 2 2 0 NB-ARC domain AAA_assoc_2 PF16193.5 gi|73663844|ref|YP_300090.1| - 0.075 13.4 0.1 0.19 12.1 0.1 1.7 1 0 0 1 1 1 0 AAA C-terminal domain AAA_24 PF13479.6 gi|73663844|ref|YP_300090.1| - 0.081 12.6 0.0 0.17 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|73663844|ref|YP_300090.1| - 0.11 11.7 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.6 gi|73663844|ref|YP_300090.1| - 0.17 12.2 0.0 0.45 10.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain CM_2 PF01817.21 gi|73663844|ref|YP_300090.1| - 0.25 11.7 4.2 49 4.4 0.1 3.8 4 0 0 4 4 4 0 Chorismate mutase type II LigT_PEase PF02834.16 gi|73667560|ref|YP_303575.1| - 0.0075 16.4 0.0 7.9 6.7 0.0 2.9 3 0 0 3 3 3 2 LigT like Phosphoesterase Dioxygenase_C PF00775.21 gi|73667560|ref|YP_303575.1| - 0.0075 15.7 0.1 0.96 8.9 0.0 2.2 2 0 0 2 2 2 2 Dioxygenase O-ag_pol_Wzy PF14296.6 gi|73667560|ref|YP_303575.1| - 0.013 14.2 3.4 0.28 9.8 0.3 2.2 2 0 0 2 2 2 0 O-antigen polysaccharide polymerase Wzy DEP PF00610.21 gi|73667560|ref|YP_303575.1| - 0.07 13.2 0.1 18 5.5 0.0 2.3 2 0 0 2 2 2 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) DUF1349 PF07081.11 gi|73667560|ref|YP_303575.1| - 0.33 10.7 6.7 2.3 7.9 0.5 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1349) Asparaginase PF00710.20 gi|73667561|ref|YP_303576.1| - 2.3e-60 203.5 1.4 3.9e-60 202.7 1.4 1.3 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|73667561|ref|YP_303576.1| - 1.4e-28 99.4 0.0 2e-27 95.6 0.0 2.3 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|73667561|ref|YP_303576.1| - 4.2e-17 61.2 0.6 8.8e-17 60.2 0.6 1.6 1 0 0 1 1 1 1 GatD N-terminal domain IPPT PF01715.17 gi|73667561|ref|YP_303576.1| - 0.076 12.8 0.0 0.13 12.1 0.0 1.7 1 1 0 1 1 1 0 IPP transferase Lyase_1 PF00206.20 gi|73667562|ref|YP_303577.1| - 2e-63 214.7 0.0 3.9e-63 213.7 0.0 1.5 2 0 0 2 2 2 1 Lyase ASL_C2 PF14698.6 gi|73667562|ref|YP_303577.1| - 1.3e-14 54.7 0.0 5.4e-14 52.7 0.0 2.2 1 0 0 1 1 1 1 Argininosuccinate lyase C-terminal DUF5527 PF17665.1 gi|73667563|ref|YP_303578.1| - 0.066 12.7 0.0 0.1 12.1 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5527) RSN1_TM PF13967.6 gi|73667563|ref|YP_303578.1| - 0.07 12.9 0.1 0.091 12.5 0.1 1.2 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport Pep_M12B_propep PF01562.19 gi|73667564|ref|YP_303579.1| - 2.5e-10 40.7 0.0 2.8e-10 40.6 0.0 1.1 1 0 0 1 1 1 1 Reprolysin family propeptide Big_6 PF17936.1 gi|73667564|ref|YP_303579.1| - 0.11 12.8 1.5 0.25 11.7 0.3 2.1 1 1 0 2 2 2 0 Bacterial Ig domain Methyltransf_11 PF08241.12 gi|73667566|ref|YP_303581.1| - 1.6e-26 92.8 0.0 2.8e-26 92.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73667566|ref|YP_303581.1| - 4.7e-22 78.5 0.0 8e-22 77.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73667566|ref|YP_303581.1| - 2.7e-19 69.6 0.0 3.4e-19 69.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73667566|ref|YP_303581.1| - 4.6e-19 68.7 0.0 6.8e-19 68.2 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73667566|ref|YP_303581.1| - 8.6e-18 64.5 0.0 1.4e-17 63.8 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|73667566|ref|YP_303581.1| - 2.2e-16 60.4 0.0 3.5e-16 59.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|73667566|ref|YP_303581.1| - 4e-06 26.6 0.0 5.9e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_9 PF08003.11 gi|73667566|ref|YP_303581.1| - 0.00013 21.0 0.0 0.00018 20.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_4 PF02390.17 gi|73667566|ref|YP_303581.1| - 0.00057 19.4 0.0 0.00096 18.7 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase TehB PF03848.14 gi|73667566|ref|YP_303581.1| - 0.00094 18.6 0.0 0.0019 17.6 0.0 1.5 1 1 1 2 2 2 1 Tellurite resistance protein TehB UPF0020 PF01170.18 gi|73667566|ref|YP_303581.1| - 0.006 16.3 0.0 0.013 15.2 0.0 1.5 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 PCMT PF01135.19 gi|73667566|ref|YP_303581.1| - 0.015 15.1 0.0 0.028 14.2 0.0 1.6 1 1 1 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DREV PF05219.12 gi|73667566|ref|YP_303581.1| - 0.21 10.7 0.0 0.27 10.3 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase ThiI PF02568.14 gi|73667568|ref|YP_303583.1| - 2.5e-51 174.1 0.0 3.6e-51 173.5 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|73667568|ref|YP_303583.1| - 2.6e-20 73.0 0.0 1.8e-18 67.0 0.0 2.3 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 gi|73667568|ref|YP_303583.1| - 2.9e-05 23.6 0.0 0.026 14.0 0.0 2.3 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|73667568|ref|YP_303583.1| - 0.00094 18.1 0.0 0.0017 17.2 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase TPR_1 PF00515.28 gi|73667569|ref|YP_303584.1| - 1.1e-169 544.1 73.7 5.8e-10 38.6 1.3 25.2 25 0 0 25 25 25 24 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73667569|ref|YP_303584.1| - 3.6e-141 448.2 55.3 7.5e-08 31.9 0.4 25.1 25 0 0 25 25 25 24 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73667569|ref|YP_303584.1| - 2.4e-117 373.6 77.7 4e-08 32.9 0.1 25.1 25 0 0 25 25 25 23 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73667569|ref|YP_303584.1| - 2.6e-106 347.0 83.0 1.9e-07 30.7 0.0 24.8 9 7 17 26 26 25 20 TPR repeat TPR_16 PF13432.6 gi|73667569|ref|YP_303584.1| - 2.1e-93 306.7 0.1 6.8e-09 36.2 0.1 15.2 10 4 5 16 16 15 15 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73667569|ref|YP_303584.1| - 2.4e-84 271.8 61.1 1.3e-05 25.2 0.1 25.7 27 0 0 27 27 26 18 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73667569|ref|YP_303584.1| - 1.9e-73 236.8 2.9 0.00044 20.8 0.3 22.0 9 7 15 24 24 23 15 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73667569|ref|YP_303584.1| - 1.9e-69 229.8 0.0 5.2e-08 32.9 0.0 13.1 8 4 5 14 14 14 11 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73667569|ref|YP_303584.1| - 1.1e-65 217.9 41.6 8.2e-06 26.0 0.0 18.0 6 5 14 20 20 20 19 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73667569|ref|YP_303584.1| - 4.5e-62 201.6 31.5 0.0041 17.1 0.1 21.2 19 2 1 20 20 20 14 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73667569|ref|YP_303584.1| - 1.1e-57 192.5 23.8 4e-05 24.1 0.0 15.0 9 6 4 16 16 16 11 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73667569|ref|YP_303584.1| - 1.7e-45 150.6 21.8 0.16 12.6 0.0 21.4 22 0 0 22 22 21 7 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73667569|ref|YP_303584.1| - 2.4e-42 143.0 44.5 8e-06 26.0 0.0 11.3 5 3 5 12 12 12 11 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 gi|73667569|ref|YP_303584.1| - 2.5e-23 82.8 17.1 0.0011 18.0 0.0 10.4 3 2 6 11 11 11 8 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.6 gi|73667569|ref|YP_303584.1| - 8.2e-20 70.6 37.0 0.38 10.8 0.1 17.6 15 5 5 20 20 18 4 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|73667569|ref|YP_303584.1| - 2.7e-17 62.0 31.1 0.23 11.4 0.0 20.2 23 1 1 24 24 22 2 Tetratricopeptide repeat TPR_15 PF13429.6 gi|73667569|ref|YP_303584.1| - 9.4e-16 57.8 11.1 6.6e-05 22.3 0.6 10.3 5 4 7 12 12 12 2 Tetratricopeptide repeat MIT PF04212.18 gi|73667569|ref|YP_303584.1| - 2.9e-15 56.1 58.9 0.0051 16.9 0.1 19.1 20 1 1 21 21 20 4 MIT (microtubule interacting and transport) domain DUF3856 PF12968.7 gi|73667569|ref|YP_303584.1| - 8.6e-13 48.6 11.9 8.3 6.5 0.2 15.1 7 3 6 15 15 15 0 Domain of Unknown Function (DUF3856) TPR_5 PF12688.7 gi|73667569|ref|YP_303584.1| - 9.1e-10 38.8 7.3 0.0002 21.6 0.1 8.4 8 3 0 9 9 8 1 Tetratrico peptide repeat BTAD PF03704.17 gi|73667569|ref|YP_303584.1| - 3.1e-09 37.4 9.9 0.021 15.3 0.0 7.4 6 3 1 7 7 6 2 Bacterial transcriptional activator domain SRP_TPR_like PF17004.5 gi|73667569|ref|YP_303584.1| - 1.4e-08 34.8 24.9 1.2 9.2 0.3 9.6 4 4 2 8 8 8 2 Putative TPR-like repeat NRBF2_MIT PF17169.4 gi|73667569|ref|YP_303584.1| - 2e-07 31.1 14.5 35 4.7 0.0 11.7 13 1 1 14 14 12 0 MIT domain of nuclear receptor-binding factor 2 Alkyl_sulf_dimr PF14863.6 gi|73667569|ref|YP_303584.1| - 5.9e-06 26.8 4.6 14 6.1 0.0 7.6 5 4 4 9 9 9 0 Alkyl sulfatase dimerisation ChAPs PF09295.10 gi|73667569|ref|YP_303584.1| - 9.7e-06 24.8 1.1 0.72 8.8 0.1 4.4 4 0 0 4 4 4 2 ChAPs (Chs5p-Arf1p-binding proteins) DUF627 PF04781.12 gi|73667569|ref|YP_303584.1| - 0.00018 21.5 4.8 0.61 10.1 0.0 5.6 6 1 0 6 6 5 1 Protein of unknown function (DUF627) FAT PF02259.23 gi|73667569|ref|YP_303584.1| - 0.00093 18.5 11.3 4.6 6.4 0.0 7.3 4 3 1 6 6 6 1 FAT domain TPR_4 PF07721.14 gi|73667569|ref|YP_303584.1| - 0.00094 19.6 1.4 1.7e+02 3.3 0.0 8.2 11 1 1 12 12 5 0 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|73667569|ref|YP_303584.1| - 0.0013 18.2 10.1 0.078 12.4 0.2 5.2 5 2 1 7 7 6 1 Coatomer epsilon subunit DUF4919 PF16266.5 gi|73667569|ref|YP_303584.1| - 0.0026 17.7 4.8 19 5.1 0.1 5.4 4 2 1 5 5 5 0 Domain of unknown function (DUF4919) SHNi-TPR PF10516.9 gi|73667569|ref|YP_303584.1| - 0.044 13.3 10.8 13 5.3 0.0 6.9 7 0 0 7 7 7 0 SHNi-TPR TPR_20 PF14561.6 gi|73667569|ref|YP_303584.1| - 0.053 13.8 2.2 35 4.8 0.0 5.1 5 1 2 7 7 4 0 Tetratricopeptide repeat Wzy_C_2 PF11846.8 gi|73667569|ref|YP_303584.1| - 0.13 12.2 0.0 62 3.4 0.0 3.8 4 0 0 4 4 3 0 Virulence factor membrane-bound polymerase, C-terminal Rapsyn_N PF10579.9 gi|73667569|ref|YP_303584.1| - 0.17 12.0 1.5 1e+02 3.1 0.1 5.5 5 2 2 7 7 5 0 Rapsyn N-terminal myristoylation and linker region HD PF01966.22 gi|73667570|ref|YP_303585.1| - 3.8e-11 43.3 1.2 4.8e-11 42.9 0.4 1.7 2 1 0 2 2 2 1 HD domain DUF5390 PF17365.2 gi|73667570|ref|YP_303585.1| - 0.12 12.6 1.1 0.33 11.2 0.2 2.1 2 1 0 2 2 2 0 Family of unknown function (DUF5390) NIF3 PF01784.18 gi|73667571|ref|YP_303586.1| - 6.3e-58 196.3 0.1 7.8e-58 196.0 0.1 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) DUF11 PF01345.18 gi|73667572|ref|YP_303587.1| - 1.5e-15 57.2 1.1 4.9e-13 49.2 0.4 3.3 3 0 0 3 3 3 1 Domain of unknown function DUF11 BatD PF13584.6 gi|73667572|ref|YP_303587.1| - 1.8e-11 43.6 0.1 3.3e-07 29.5 0.1 2.3 2 0 0 2 2 2 2 Oxygen tolerance CARDB PF07705.11 gi|73667572|ref|YP_303587.1| - 1.6e-07 31.5 0.9 0.013 15.8 0.2 3.7 3 0 0 3 3 3 2 CARDB PGF-CTERM PF18204.1 gi|73667572|ref|YP_303587.1| - 2.6e-06 27.2 5.1 2.6e-06 27.2 5.1 2.5 2 1 0 2 2 2 1 PGF-CTERM motif bMG10 PF17973.1 gi|73667572|ref|YP_303587.1| - 0.00017 21.8 2.5 8.9 6.5 0.0 5.2 5 1 1 6 6 6 2 Bacterial Alpha-2-macroglobulin MG10 domain Top6b_C PF18000.1 gi|73667572|ref|YP_303587.1| - 0.00034 20.8 1.6 0.01 16.0 0.1 3.3 3 1 0 3 3 3 1 Type 2 DNA topoisomerase 6 subunit B C-terminal domain Glyco_hydro_2 PF00703.21 gi|73667572|ref|YP_303587.1| - 0.012 16.3 3.4 0.79 10.4 0.3 3.2 2 0 0 2 2 2 0 Glycosyl hydrolases family 2 Mfa_like_1 PF13149.6 gi|73667572|ref|YP_303587.1| - 2 8.4 10.1 0.077 13.0 1.6 2.3 2 1 0 2 2 2 0 Fimbrillin-like DHHA1 PF02272.19 gi|73667573|ref|YP_303588.1| - 4.1e-17 62.9 0.1 1.2e-16 61.4 0.1 1.8 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|73667573|ref|YP_303588.1| - 2.5e-05 24.4 0.1 4.1e-05 23.7 0.1 1.3 1 0 0 1 1 1 1 DHH family DDE_Tnp_1 PF01609.21 gi|73667574|ref|YP_303589.1| - 1.8e-21 76.8 0.9 2.2e-21 76.5 0.9 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73667574|ref|YP_303589.1| - 0.0075 16.0 0.3 0.28 10.8 0.3 2.3 1 1 0 1 1 1 1 DDE superfamily endonuclease L_lactis_RepB_C PF06430.12 gi|73667574|ref|YP_303589.1| - 0.057 13.4 0.3 0.12 12.4 0.3 1.5 1 0 0 1 1 1 0 Lactococcus lactis RepB C-terminus Acyl_transf_3 PF01757.22 gi|73667576|ref|YP_303591.1| - 3.8e-16 59.1 40.9 5.2e-16 58.6 40.9 1.1 1 0 0 1 1 1 1 Acyltransferase family CoatB PF10389.9 gi|73667576|ref|YP_303591.1| - 4.8 7.1 6.0 0.78 9.6 1.4 2.0 2 0 0 2 2 2 0 Bacteriophage coat protein B UDPG_MGDP_dh_C PF03720.15 gi|73667577|ref|YP_303592.1| - 5.8e-21 74.9 0.0 1.9e-20 73.3 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 gi|73667577|ref|YP_303592.1| - 6.4e-16 58.3 0.0 1.3e-15 57.3 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_N PF03721.14 gi|73667577|ref|YP_303592.1| - 4.2e-05 23.2 0.0 0.001 18.7 0.0 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_11 PF14833.6 gi|73667577|ref|YP_303592.1| - 0.13 12.5 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GDP_Man_Dehyd PF16363.5 gi|73667578|ref|YP_303593.1| - 9.5e-62 209.3 0.0 3.3e-61 207.5 0.0 1.7 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|73667578|ref|YP_303593.1| - 3.4e-60 203.5 0.0 4.1e-60 203.2 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|73667578|ref|YP_303593.1| - 4.4e-25 88.2 0.0 5.9e-25 87.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|73667578|ref|YP_303593.1| - 3.5e-19 69.0 0.0 1.2e-18 67.2 0.0 1.7 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|73667578|ref|YP_303593.1| - 9.7e-12 45.2 0.0 1.5e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|73667578|ref|YP_303593.1| - 7.3e-11 41.7 0.0 6.8e-06 25.4 0.0 2.5 2 1 0 2 2 2 2 Male sterility protein RmlD_sub_bind PF04321.17 gi|73667578|ref|YP_303593.1| - 6.2e-10 38.6 0.0 1.1e-09 37.8 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain TrkA_N PF02254.18 gi|73667578|ref|YP_303593.1| - 0.0013 19.0 0.0 0.0023 18.1 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain NmrA PF05368.13 gi|73667578|ref|YP_303593.1| - 0.0017 18.0 0.0 0.0036 16.9 0.0 1.5 2 0 0 2 2 2 1 NmrA-like family TehB PF03848.14 gi|73667578|ref|YP_303593.1| - 0.014 14.8 0.1 0.022 14.2 0.1 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB Ldh_1_N PF00056.23 gi|73667578|ref|YP_303593.1| - 0.024 14.7 0.1 0.04 14.0 0.1 1.3 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain DUF1188 PF06690.11 gi|73667578|ref|YP_303593.1| - 0.075 12.6 0.5 0.1 12.1 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1188) KR PF08659.10 gi|73667578|ref|YP_303593.1| - 0.23 11.4 0.1 2.4 8.0 0.0 2.1 2 0 0 2 2 2 0 KR domain EPSP_synthase PF00275.20 gi|73667579|ref|YP_303594.1| - 4.9e-69 233.0 0.0 5.6e-69 232.8 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MurB_C PF02873.16 gi|73667580|ref|YP_303595.1| - 1.7e-30 105.5 0.0 2.8e-30 104.8 0.0 1.4 1 0 0 1 1 1 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FAD_binding_4 PF01565.23 gi|73667580|ref|YP_303595.1| - 7.7e-18 64.6 0.0 1.6e-17 63.5 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain DbpA PF03880.15 gi|73667580|ref|YP_303595.1| - 0.63 10.1 2.7 14 5.8 0.1 3.3 3 0 0 3 3 3 0 DbpA RNA binding domain Polysacc_synt_C PF14667.6 gi|73667581|ref|YP_303596.1| - 9.8e-18 64.6 28.0 3.7e-16 59.5 5.8 3.6 3 1 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain Polysacc_synt PF01943.17 gi|73667581|ref|YP_303596.1| - 4.2e-17 62.4 27.9 4.2e-17 62.4 27.9 2.2 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|73667581|ref|YP_303596.1| - 3.1e-10 39.8 17.2 3.1e-10 39.8 17.2 1.5 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein MurJ PF03023.14 gi|73667581|ref|YP_303596.1| - 2.1e-08 33.2 28.9 3.8e-08 32.4 28.9 1.3 1 0 0 1 1 1 1 Lipid II flippase MurJ Rep_fac_C PF08542.11 gi|73667582|ref|YP_303597.1| - 0.078 13.4 0.3 0.49 10.9 0.0 2.4 2 1 0 2 2 2 0 Replication factor C C-terminal domain LAGLIDADG_2 PF03161.13 gi|73667582|ref|YP_303597.1| - 0.12 12.4 4.4 0.079 13.0 1.5 2.1 2 0 0 2 2 2 0 LAGLIDADG DNA endonuclease family Glycos_transf_1 PF00534.20 gi|73667584|ref|YP_303599.1| - 3.7e-35 121.0 0.0 7.1e-35 120.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73667584|ref|YP_303599.1| - 4.8e-31 108.0 0.0 8.2e-31 107.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|73667584|ref|YP_303599.1| - 6.2e-10 39.3 0.0 1e-09 38.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|73667585|ref|YP_303600.1| - 5.6e-36 123.7 0.0 2e-35 121.8 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73667585|ref|YP_303600.1| - 1.5e-26 93.4 0.0 2.4e-26 92.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|73667585|ref|YP_303600.1| - 3.1e-24 85.9 0.0 4.9e-24 85.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|73667585|ref|YP_303600.1| - 5.9e-17 62.6 0.0 8.4e-17 62.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|73667585|ref|YP_303600.1| - 4e-07 30.0 0.8 7.1e-05 22.6 0.8 2.2 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_4_2 PF13477.6 gi|73667585|ref|YP_303600.1| - 3.4e-05 23.9 0.9 7.8e-05 22.7 0.9 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|73667585|ref|YP_303600.1| - 0.0004 20.7 0.0 0.00088 19.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_28 PF03033.20 gi|73667585|ref|YP_303600.1| - 0.011 15.7 0.1 0.4 10.7 0.0 2.3 1 1 1 2 2 2 0 Glycosyltransferase family 28 N-terminal domain Bromodomain PF00439.25 gi|73667585|ref|YP_303600.1| - 0.094 12.8 0.1 0.65 10.1 0.0 2.4 2 1 1 3 3 3 0 Bromodomain Hexapep PF00132.24 gi|73667586|ref|YP_303601.1| - 1.3e-17 62.8 13.3 6.7e-09 35.1 2.1 6.1 4 1 1 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73667586|ref|YP_303601.1| - 1.1e-12 47.5 17.2 3.2e-07 30.0 0.8 4.8 5 0 0 5 5 5 4 Hexapeptide repeat of succinyl-transferase Glyco_trans_1_2 PF13524.6 gi|73667587|ref|YP_303602.1| - 3.1e-23 82.0 0.0 8.9e-23 80.5 0.1 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 DUF3880 PF12996.7 gi|73667587|ref|YP_303602.1| - 0.0014 18.7 0.1 0.0029 17.6 0.1 1.5 1 0 0 1 1 1 1 DUF based on E. rectale Gene description (DUF3880) Glycos_transf_1 PF00534.20 gi|73667587|ref|YP_303602.1| - 0.082 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferases group 1 Gram_pos_anchor PF00746.21 gi|73667588|ref|YP_303603.1| - 1.6 8.7 4.8 10 6.2 2.5 2.1 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Glycos_transf_2 PF00535.26 gi|73667589|ref|YP_303604.1| - 4.9e-09 36.2 0.1 1.4e-08 34.7 0.1 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 2 GDP_Man_Dehyd PF16363.5 gi|73667590|ref|YP_303605.1| - 1.3e-164 547.4 0.0 1.5e-164 547.2 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|73667590|ref|YP_303605.1| - 4.4e-77 258.8 0.1 5.9e-77 258.4 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|73667590|ref|YP_303605.1| - 2.4e-06 26.8 0.0 3.7e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|73667590|ref|YP_303605.1| - 2.1e-05 23.8 0.0 3.5e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein TPR_22 PF18833.1 gi|73667590|ref|YP_303605.1| - 0.031 14.4 0.4 7.4 6.8 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat adh_short PF00106.25 gi|73667590|ref|YP_303605.1| - 0.12 11.8 0.0 0.24 10.8 0.0 1.5 1 0 0 1 1 1 0 short chain dehydrogenase Epimerase PF01370.21 gi|73667591|ref|YP_303606.1| - 1.8e-84 283.0 0.0 2.1e-84 282.7 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|73667591|ref|YP_303606.1| - 2.4e-22 79.8 0.0 1.7e-21 77.0 0.0 2.1 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|73667591|ref|YP_303606.1| - 2.7e-08 33.3 0.0 1.5e-05 24.3 0.0 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|73667591|ref|YP_303606.1| - 7.4e-08 31.8 0.0 1.4e-07 30.9 0.0 1.6 2 1 0 2 2 2 1 RmlD substrate binding domain Abhydrolase_5 PF12695.7 gi|73667591|ref|YP_303606.1| - 0.063 13.0 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family Epimerase PF01370.21 gi|73667592|ref|YP_303607.1| - 2.3e-52 177.9 0.0 2.7e-52 177.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|73667592|ref|YP_303607.1| - 8.3e-48 163.5 0.0 1.5e-47 162.6 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|73667592|ref|YP_303607.1| - 1.2e-22 80.3 0.0 1.5e-22 79.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|73667592|ref|YP_303607.1| - 1.1e-17 64.1 0.1 1.2e-16 60.7 0.1 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|73667592|ref|YP_303607.1| - 7.9e-16 58.0 0.0 1e-15 57.6 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|73667592|ref|YP_303607.1| - 5.6e-13 49.2 0.0 1.1e-12 48.2 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|73667592|ref|YP_303607.1| - 1.7e-11 43.8 0.4 2.9e-09 36.5 0.4 2.8 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.25 gi|73667592|ref|YP_303607.1| - 5e-07 29.4 0.0 6.5e-06 25.7 0.0 2.3 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 gi|73667592|ref|YP_303607.1| - 1e-06 28.5 0.1 9.5e-06 25.3 0.0 2.1 2 0 0 2 2 2 1 NmrA-like family Pyr_redox PF00070.27 gi|73667592|ref|YP_303607.1| - 0.014 15.9 0.2 0.61 10.7 0.0 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|73667592|ref|YP_303607.1| - 0.014 15.6 0.2 0.046 14.0 0.0 1.9 2 0 0 2 2 2 0 TrkA-N domain KR PF08659.10 gi|73667592|ref|YP_303607.1| - 0.047 13.6 0.1 0.15 11.9 0.1 1.8 1 1 0 1 1 1 0 KR domain Epimerase PF01370.21 gi|73667593|ref|YP_303608.1| - 8.8e-19 67.9 0.0 1.1e-18 67.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|73667593|ref|YP_303608.1| - 2.6e-07 30.4 0.0 6.4e-07 29.1 0.0 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase DDE_Tnp_1 PF01609.21 gi|73667594|ref|YP_303609.1| - 1.1e-21 77.5 0.8 1.5e-21 77.1 0.8 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73667594|ref|YP_303609.1| - 0.0099 15.6 0.2 0.33 10.6 0.2 2.3 1 1 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_ISAZ013 PF07592.11 gi|73667595|ref|YP_303610.1| - 0.005 15.9 0.0 0.0071 15.4 0.0 1.2 1 0 0 1 1 1 1 Rhodopirellula transposase DDE domain Polysacc_synt PF01943.17 gi|73667596|ref|YP_303611.1| - 1.1e-27 97.1 29.1 1.1e-27 97.1 29.1 2.1 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|73667596|ref|YP_303611.1| - 1.3e-25 90.2 23.2 2.6e-25 89.3 23.2 1.5 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|73667596|ref|YP_303611.1| - 1.5e-13 51.0 10.5 1.5e-13 51.0 10.5 4.7 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|73667596|ref|YP_303611.1| - 7.8e-12 45.1 39.5 1.5e-08 34.5 11.7 3.0 3 1 0 3 3 3 2 MatE MurJ PF03023.14 gi|73667596|ref|YP_303611.1| - 7.5e-09 34.7 36.0 1e-08 34.2 36.0 1.3 1 1 0 1 1 1 1 Lipid II flippase MurJ DUF2976 PF11190.8 gi|73667596|ref|YP_303611.1| - 0.067 13.0 0.4 0.067 13.0 0.4 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2976) MtrF PF09472.10 gi|73667596|ref|YP_303611.1| - 1.9 7.9 7.8 13 5.3 0.1 2.9 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) HTH_23 PF13384.6 gi|73667598|ref|YP_303613.1| - 2.2e-06 27.3 0.0 3.5e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.12 gi|73667598|ref|YP_303613.1| - 6.7e-06 25.9 0.0 9.6e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_28 PF13518.6 gi|73667598|ref|YP_303613.1| - 2.7e-05 24.2 0.0 3.9e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|73667598|ref|YP_303613.1| - 0.00088 19.0 0.0 0.0015 18.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Zn-ribbon_8 PF09723.10 gi|73667598|ref|YP_303613.1| - 0.004 17.3 1.7 0.33 11.1 0.1 2.3 2 0 0 2 2 2 1 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|73667598|ref|YP_303613.1| - 0.005 16.8 2.5 0.0087 16.0 2.5 1.4 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Zn_Tnp_IS1 PF03811.13 gi|73667598|ref|YP_303613.1| - 0.013 15.2 5.2 0.027 14.2 5.2 1.5 1 0 0 1 1 1 0 InsA N-terminal domain HTH_29 PF13551.6 gi|73667598|ref|YP_303613.1| - 0.023 14.7 0.0 0.034 14.2 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Tnp_1 PF01527.20 gi|73667598|ref|YP_303613.1| - 0.027 14.8 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbons_6 PF07191.12 gi|73667598|ref|YP_303613.1| - 0.034 14.1 1.2 0.056 13.4 0.8 1.5 2 0 0 2 2 2 0 zinc-ribbons TnsD PF15978.5 gi|73667598|ref|YP_303613.1| - 0.045 12.7 0.1 0.081 11.9 0.1 1.4 1 1 0 1 1 1 0 Tn7-like transposition protein D DUF1670 PF07900.11 gi|73667598|ref|YP_303613.1| - 0.063 12.6 0.1 0.07 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) C1_1 PF00130.22 gi|73667598|ref|YP_303613.1| - 0.064 13.2 2.1 0.19 11.6 2.1 1.7 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) A2L_zn_ribbon PF08792.10 gi|73667598|ref|YP_303613.1| - 0.096 12.4 4.1 0.66 9.8 0.2 2.3 1 1 1 2 2 2 0 A2L zinc ribbon domain zf-Mss51 PF13824.6 gi|73667598|ref|YP_303613.1| - 0.19 11.9 3.3 0.88 9.7 3.3 2.0 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Rubredoxin PF00301.20 gi|73667598|ref|YP_303613.1| - 0.24 11.4 2.7 1.5 8.9 0.7 2.2 2 0 0 2 2 2 0 Rubredoxin zf-ISL3 PF14690.6 gi|73667598|ref|YP_303613.1| - 1.7 9.4 10.8 2.8 8.7 0.9 2.9 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DDE_Tnp_IS1 PF03400.13 gi|73667599|ref|YP_303614.1| - 1.1e-12 48.4 0.1 1.4e-12 48.1 0.1 1.0 1 0 0 1 1 1 1 IS1 transposase TERT_thumb PF17984.1 gi|73667599|ref|YP_303614.1| - 0.059 13.3 0.1 0.073 13.0 0.1 1.2 1 0 0 1 1 1 0 Telomerase reverse transcriptase thumb DNA binding domain DUF772 PF05598.11 gi|73667601|ref|YP_303616.1| - 3.5e-08 33.3 0.0 5.2e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Transposase domain (DUF772) Hexapep_2 PF14602.6 gi|73667602|ref|YP_303617.1| - 5.7e-17 61.2 17.0 3.5e-11 42.7 5.4 2.6 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 gi|73667602|ref|YP_303617.1| - 2.6e-11 42.8 22.4 2.3e-09 36.6 6.3 3.7 3 1 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) YadA_head PF05658.14 gi|73667602|ref|YP_303617.1| - 0.53 10.7 0.1 0.53 10.7 0.1 2.9 4 0 0 4 4 4 0 Head domain of trimeric autotransporter adhesin DDE_Tnp_1 PF01609.21 gi|73667603|ref|YP_303618.1| - 5.4e-09 36.0 0.4 8.6e-09 35.4 0.4 1.4 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.9 gi|73667604|ref|YP_303619.1| - 0.0045 17.0 0.1 0.0065 16.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2603) Glycos_transf_1 PF00534.20 gi|73667605|ref|YP_303620.1| - 1.2e-33 116.1 0.8 2e-33 115.4 0.3 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73667605|ref|YP_303620.1| - 2.2e-27 96.1 0.0 4.1e-27 95.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73667605|ref|YP_303620.1| - 6.6e-13 49.0 0.0 1.7e-12 47.7 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|73667605|ref|YP_303620.1| - 1.9e-06 28.2 0.0 1.9e-05 25.0 0.0 2.3 2 0 0 2 2 2 1 Glycosyl transferases group 1 SQHop_cyclase_C PF13243.6 gi|73667606|ref|YP_303621.1| - 0.0071 15.5 0.2 0.61 9.1 0.0 2.4 2 1 0 2 2 2 2 Squalene-hopene cyclase C-terminal domain Epimerase_2 PF02350.19 gi|73667607|ref|YP_303622.1| - 1.5e-116 389.0 0.0 1.8e-116 388.8 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.6 gi|73667607|ref|YP_303622.1| - 0.0055 16.7 0.0 0.013 15.5 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like PS_pyruv_trans PF04230.13 gi|73667607|ref|YP_303622.1| - 0.017 15.1 0.0 0.036 14.0 0.0 1.5 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase PIG-L PF02585.17 gi|73667607|ref|YP_303622.1| - 0.051 14.2 0.0 6.1 7.5 0.0 2.4 1 1 1 2 2 2 0 GlcNAc-PI de-N-acetylase MGDG_synth PF06925.11 gi|73667607|ref|YP_303622.1| - 0.06 13.5 0.1 4.6 7.3 0.0 2.8 3 0 0 3 3 3 0 Monogalactosyldiacylglycerol (MGDG) synthase Glyco_transf_4 PF13439.6 gi|73667607|ref|YP_303622.1| - 0.1 12.6 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase Family 4 DUF354 PF04007.12 gi|73667608|ref|YP_303623.1| - 1.4e-21 76.9 0.1 1.8e-21 76.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|73667608|ref|YP_303623.1| - 0.011 15.7 0.2 0.02 15.0 0.2 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like Glycos_transf_2 PF00535.26 gi|73667609|ref|YP_303624.1| - 6.3e-38 130.3 0.0 2.3e-21 76.4 0.0 2.9 2 1 1 3 3 3 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73667609|ref|YP_303624.1| - 8.4e-13 48.7 0.0 4.1e-08 33.4 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|73667609|ref|YP_303624.1| - 2.3e-08 34.5 0.0 0.00024 21.5 0.0 2.4 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|73667609|ref|YP_303624.1| - 8.7e-05 22.1 0.1 0.18 11.2 0.0 2.3 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Bax1-I PF01027.20 gi|73667609|ref|YP_303624.1| - 0.054 13.3 4.4 0.088 12.6 4.4 1.3 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 RSV_NS2 PF03113.14 gi|73667609|ref|YP_303624.1| - 0.099 12.7 0.0 0.24 11.4 0.0 1.7 1 0 0 1 1 1 0 Respiratory synctial virus non-structural protein NS2 CPBP PF02517.16 gi|73667610|ref|YP_303625.1| - 7.4e-17 61.5 9.1 7.4e-17 61.5 9.1 2.4 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease TNFR_16_TM PF18422.1 gi|73667611|ref|YP_303626.1| - 0.8 9.7 6.2 4.3 7.4 1.3 2.2 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain POR PF01558.18 gi|73667612|ref|YP_303627.1| - 2.9e-42 144.7 0.3 3.4e-42 144.5 0.3 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|73667613|ref|YP_303628.1| - 3.2e-27 95.2 0.1 5.4e-27 94.5 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|73667613|ref|YP_303628.1| - 6.6e-13 48.9 0.1 1.8e-12 47.5 0.1 1.7 1 1 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|73667613|ref|YP_303628.1| - 3e-07 30.0 16.9 0.00019 21.1 3.2 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain TPP_enzyme_N PF02776.18 gi|73667613|ref|YP_303628.1| - 1.3e-06 28.1 0.1 4.7e-06 26.3 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_2 PF12797.7 gi|73667613|ref|YP_303628.1| - 0.00017 21.4 17.7 0.00089 19.2 3.4 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73667613|ref|YP_303628.1| - 0.00069 19.7 13.6 0.0019 18.3 13.6 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73667613|ref|YP_303628.1| - 0.0037 17.4 15.0 0.0088 16.1 15.0 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Transket_pyr PF02779.24 gi|73667613|ref|YP_303628.1| - 0.013 15.2 0.1 0.26 11.0 0.1 2.3 2 1 0 2 2 2 0 Transketolase, pyrimidine binding domain Fer4_9 PF13187.6 gi|73667613|ref|YP_303628.1| - 0.02 15.0 15.4 0.02 15.0 15.4 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73667613|ref|YP_303628.1| - 0.023 15.2 15.6 0.27 11.9 3.4 2.9 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73667613|ref|YP_303628.1| - 0.04 14.5 15.7 0.64 10.6 15.0 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73667613|ref|YP_303628.1| - 0.069 13.2 22.0 0.089 12.9 2.8 3.5 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|73667613|ref|YP_303628.1| - 3.6 8.4 13.0 1.6 9.5 1.8 3.0 1 1 1 2 2 2 0 4Fe-4S single cluster domain CbiA PF01656.23 gi|73667614|ref|YP_303629.1| - 4.8e-09 36.4 0.0 1.1e-08 35.1 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|73667614|ref|YP_303629.1| - 4.1e-06 26.4 0.1 0.00011 21.8 0.1 2.2 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase DUF87 PF01935.17 gi|73667614|ref|YP_303629.1| - 4.7e-05 23.6 0.0 9.1e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain Zeta_toxin PF06414.12 gi|73667614|ref|YP_303629.1| - 6.4e-05 22.3 0.0 0.00011 21.6 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_31 PF13614.6 gi|73667614|ref|YP_303629.1| - 0.00012 22.0 0.6 0.00058 19.8 0.1 2.1 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|73667614|ref|YP_303629.1| - 0.00033 20.0 0.9 0.00055 19.2 0.3 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase Fer4_NifH PF00142.18 gi|73667614|ref|YP_303629.1| - 0.00049 19.6 1.9 0.00093 18.7 0.1 2.1 2 1 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_24 PF13479.6 gi|73667614|ref|YP_303629.1| - 0.001 18.8 0.5 0.0056 16.4 0.1 2.1 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|73667614|ref|YP_303629.1| - 0.0033 18.0 0.1 0.0076 16.8 0.1 1.6 2 0 0 2 2 1 1 AAA domain CBP_BcsQ PF06564.12 gi|73667614|ref|YP_303629.1| - 0.0039 16.7 0.0 0.31 10.5 0.0 2.1 1 1 0 2 2 2 1 Cellulose biosynthesis protein BcsQ SRP54 PF00448.22 gi|73667614|ref|YP_303629.1| - 0.0043 16.7 0.2 0.042 13.5 0.1 2.2 2 1 0 2 2 2 1 SRP54-type protein, GTPase domain ABC_tran PF00005.27 gi|73667614|ref|YP_303629.1| - 0.005 17.4 0.1 0.0069 16.9 0.1 1.3 1 0 0 1 1 1 1 ABC transporter APS_kinase PF01583.20 gi|73667614|ref|YP_303629.1| - 0.0051 16.7 0.1 0.0092 15.9 0.1 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_25 PF13481.6 gi|73667614|ref|YP_303629.1| - 0.016 14.8 0.1 0.27 10.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|73667614|ref|YP_303629.1| - 0.023 14.8 0.1 1.1 9.4 0.1 2.3 2 0 0 2 2 2 0 50S ribosome-binding GTPase TrkA_N PF02254.18 gi|73667614|ref|YP_303629.1| - 0.029 14.6 0.0 0.96 9.7 0.0 2.3 2 0 0 2 2 2 0 TrkA-N domain CLP1_P PF16575.5 gi|73667614|ref|YP_303629.1| - 0.045 13.6 0.1 0.099 12.4 0.1 1.6 1 1 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop KAP_NTPase PF07693.14 gi|73667614|ref|YP_303629.1| - 0.052 12.8 0.1 0.068 12.4 0.1 1.2 1 0 0 1 1 1 0 KAP family P-loop domain MipZ PF09140.11 gi|73667614|ref|YP_303629.1| - 0.058 12.7 0.4 0.18 11.0 0.1 1.8 2 0 0 2 2 2 0 ATPase MipZ AAA_33 PF13671.6 gi|73667614|ref|YP_303629.1| - 0.064 13.4 0.1 0.11 12.6 0.1 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|73667614|ref|YP_303629.1| - 0.074 13.4 0.0 0.19 12.1 0.0 1.7 2 0 0 2 2 1 0 RNA helicase KTI12 PF08433.10 gi|73667614|ref|YP_303629.1| - 0.089 12.2 0.2 0.22 11.0 0.0 1.7 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_16 PF13191.6 gi|73667614|ref|YP_303629.1| - 0.12 12.7 0.0 0.2 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain PRK PF00485.18 gi|73667614|ref|YP_303629.1| - 0.16 11.7 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family OMPdecase PF00215.24 gi|73667615|ref|YP_303630.1| - 3e-41 141.5 0.2 3.8e-41 141.2 0.2 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PcrB PF01884.17 gi|73667615|ref|YP_303630.1| - 0.0011 18.4 1.1 0.33 10.4 0.1 2.5 3 0 0 3 3 3 2 PcrB family NanE PF04131.14 gi|73667615|ref|YP_303630.1| - 0.0036 16.5 2.1 0.44 9.7 0.1 2.8 2 2 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|73667615|ref|YP_303630.1| - 0.14 11.4 2.9 0.13 11.5 0.7 2.0 2 1 0 2 2 2 0 Thiazole biosynthesis protein ThiG DS PF01916.17 gi|73667616|ref|YP_303631.1| - 2e-101 339.1 0.0 2.2e-101 338.9 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase ABC_tran PF00005.27 gi|73667617|ref|YP_303632.1| - 7e-29 101.1 0.2 9.3e-29 100.7 0.2 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|73667617|ref|YP_303632.1| - 9.7e-08 31.7 1.4 2.6e-07 30.3 1.4 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73667617|ref|YP_303632.1| - 1.1e-07 32.0 4.6 9e-05 22.4 0.3 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 gi|73667617|ref|YP_303632.1| - 0.0014 17.8 0.2 0.0026 16.9 0.2 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_7 PF12775.7 gi|73667617|ref|YP_303632.1| - 0.0016 18.0 0.1 0.0035 16.9 0.1 1.5 2 0 0 2 2 2 1 P-loop containing dynein motor region RsgA_GTPase PF03193.16 gi|73667617|ref|YP_303632.1| - 0.0038 17.1 0.1 0.0071 16.3 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 gi|73667617|ref|YP_303632.1| - 0.0045 17.0 0.1 0.33 10.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|73667617|ref|YP_303632.1| - 0.0053 16.8 1.3 0.065 13.3 1.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73667617|ref|YP_303632.1| - 0.0062 16.9 0.3 0.0092 16.4 0.3 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|73667617|ref|YP_303632.1| - 0.0086 15.8 0.2 0.016 14.9 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|73667617|ref|YP_303632.1| - 0.013 15.2 0.7 0.023 14.5 0.7 1.6 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|73667617|ref|YP_303632.1| - 0.013 15.2 2.2 0.017 14.8 2.2 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|73667617|ref|YP_303632.1| - 0.014 15.8 0.1 0.031 14.7 0.1 1.6 1 1 1 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|73667617|ref|YP_303632.1| - 0.014 15.9 2.0 0.04 14.4 2.0 1.9 1 1 0 1 1 1 0 AAA domain G-alpha PF00503.20 gi|73667617|ref|YP_303632.1| - 0.015 14.5 0.2 0.018 14.2 0.2 1.2 1 0 0 1 1 1 0 G-protein alpha subunit TsaE PF02367.17 gi|73667617|ref|YP_303632.1| - 0.03 14.3 0.1 0.097 12.7 0.1 1.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 gi|73667617|ref|YP_303632.1| - 0.033 13.9 0.1 0.071 12.8 0.0 1.6 2 0 0 2 2 2 0 Sigma-54 interaction domain PduV-EutP PF10662.9 gi|73667617|ref|YP_303632.1| - 0.033 13.9 0.1 0.056 13.2 0.1 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation DUF5457 PF17540.2 gi|73667617|ref|YP_303632.1| - 0.043 13.9 0.1 0.11 12.6 0.1 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5457) SbcCD_C PF13558.6 gi|73667617|ref|YP_303632.1| - 0.045 14.0 0.2 1 9.7 0.2 2.6 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 gi|73667617|ref|YP_303632.1| - 0.055 13.7 0.3 0.099 12.9 0.2 1.6 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|73667617|ref|YP_303632.1| - 0.064 13.2 0.6 0.14 12.1 0.6 1.5 1 0 0 1 1 1 0 NACHT domain AAA_30 PF13604.6 gi|73667617|ref|YP_303632.1| - 0.07 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain Poxvirus PF06227.12 gi|73667617|ref|YP_303632.1| - 0.075 12.8 1.4 0.11 12.2 1.1 1.5 1 1 0 1 1 1 0 dsDNA Poxvirus DAP3 PF10236.9 gi|73667617|ref|YP_303632.1| - 0.12 11.5 1.1 0.2 10.8 0.7 1.6 1 1 1 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 Transposase_mut PF00872.18 gi|73667618|ref|YP_303633.1| - 1.8e-22 79.8 0.0 2e-22 79.6 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family HD PF01966.22 gi|73667620|ref|YP_303635.1| - 0.0063 16.7 0.2 0.011 16.0 0.2 1.4 1 0 0 1 1 1 1 HD domain DUF2795 PF11387.8 gi|73667621|ref|YP_303636.1| - 3.1e-25 88.1 0.6 8.7e-12 45.1 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF2795) DUF349 PF03993.12 gi|73667621|ref|YP_303636.1| - 0.023 15.0 0.4 0.2 12.0 0.1 2.2 1 1 1 2 2 2 0 Domain of Unknown Function (DUF349) AAA_27 PF13514.6 gi|73667622|ref|YP_303637.1| - 1.5e-17 63.9 0.0 1.5e-17 63.9 0.0 3.8 5 0 0 5 5 5 1 AAA domain SMC_N PF02463.19 gi|73667622|ref|YP_303637.1| - 0.00011 21.8 0.0 0.0041 16.6 0.0 2.4 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain UPF0242 PF06785.11 gi|73667622|ref|YP_303637.1| - 0.001 19.2 9.1 0.001 19.2 9.1 7.8 2 2 3 5 5 5 1 Uncharacterised protein family (UPF0242) N-terminus AAA_29 PF13555.6 gi|73667622|ref|YP_303637.1| - 0.033 13.9 0.1 0.077 12.7 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF3800 PF12686.7 gi|73667622|ref|YP_303637.1| - 0.051 14.2 0.0 68 4.1 0.0 4.4 2 2 0 2 2 2 0 Protein of unknown function (DUF3800) DUF948 PF06103.11 gi|73667622|ref|YP_303637.1| - 1.2 9.5 17.3 4.4 7.6 0.1 6.0 8 0 0 8 8 8 0 Bacterial protein of unknown function (DUF948) DUF3452 PF11934.8 gi|73667622|ref|YP_303637.1| - 1.7 8.2 4.1 8.1 6.0 0.1 3.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3452) IL5 PF02025.15 gi|73667622|ref|YP_303637.1| - 3 8.1 7.4 0.98 9.7 0.1 3.2 3 0 0 3 3 3 0 Interleukin 5 Metallophos PF00149.28 gi|73667623|ref|YP_303638.1| - 1.7e-12 48.3 0.1 3.7e-12 47.2 0.1 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|73667623|ref|YP_303638.1| - 7.1e-11 42.6 0.0 1.1e-10 41.9 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF2283 PF10049.9 gi|73667624|ref|YP_303639.1| - 7.8e-10 38.8 6.5 1.4e-09 38.0 6.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2283) DUF5028 PF16431.5 gi|73667624|ref|YP_303639.1| - 0.013 15.5 0.1 0.016 15.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5028) DUF2001 PF09393.10 gi|73667624|ref|YP_303639.1| - 0.095 12.7 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 Phage tail tube protein NUDIX PF00293.28 gi|73667625|ref|YP_303640.1| - 7.1e-13 48.7 0.0 8.5e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.6 gi|73667625|ref|YP_303640.1| - 0.12 11.9 0.0 0.41 10.2 0.0 1.7 1 1 1 2 2 2 0 Nucleotide hydrolase DUF429 PF04250.13 gi|73667626|ref|YP_303641.1| - 1.1e-46 159.3 0.0 1.3e-46 159.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF429) RNA_pol_A_bac PF01000.26 gi|73667627|ref|YP_303642.1| - 4e-27 94.8 0.0 2e-26 92.6 0.0 2.0 2 1 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|73667627|ref|YP_303642.1| - 8.5e-15 54.0 0.0 1.3e-14 53.4 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4 PF00037.27 gi|73667627|ref|YP_303642.1| - 1.6e-05 24.5 18.5 0.0054 16.5 5.5 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73667627|ref|YP_303642.1| - 3.6e-05 24.3 24.0 0.00015 22.3 12.0 2.7 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73667627|ref|YP_303642.1| - 3.8e-05 23.8 23.3 0.0003 20.9 11.7 2.7 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73667627|ref|YP_303642.1| - 0.00042 20.7 14.3 0.11 13.0 6.6 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73667627|ref|YP_303642.1| - 0.0021 18.1 12.4 0.0021 18.1 12.4 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73667627|ref|YP_303642.1| - 0.003 17.5 5.3 0.003 17.5 5.3 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73667627|ref|YP_303642.1| - 0.0066 17.4 6.0 0.022 15.7 1.4 3.0 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain DUF4879 PF16219.5 gi|73667627|ref|YP_303642.1| - 0.012 15.8 0.1 0.52 10.5 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4879) Fer4_21 PF14697.6 gi|73667627|ref|YP_303642.1| - 0.015 15.4 11.5 0.015 15.4 11.5 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73667627|ref|YP_303642.1| - 0.023 15.3 15.6 0.032 14.8 0.8 3.0 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73667627|ref|YP_303642.1| - 2.4 8.4 23.9 1.3 9.2 4.0 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain Ribosomal_S11 PF00411.19 gi|73667628|ref|YP_303643.1| - 1.9e-46 157.0 3.3 2.7e-46 156.5 3.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S11 Pilus_CpaD PF09476.10 gi|73667628|ref|YP_303643.1| - 0.023 14.4 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) CBM_25 PF03423.13 gi|73667628|ref|YP_303643.1| - 0.092 13.0 0.1 0.22 11.8 0.0 1.6 2 0 0 2 2 2 0 Carbohydrate binding domain (family 25) S4 PF01479.25 gi|73667629|ref|YP_303644.1| - 1.7e-14 53.3 0.8 6.3e-14 51.4 0.1 2.2 2 0 0 2 2 2 1 S4 domain Ribosomal_S13 PF00416.22 gi|73667630|ref|YP_303645.1| - 4.1e-40 137.1 0.0 5e-40 136.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 DDE_Tnp_1 PF01609.21 gi|73667631|ref|YP_303646.1| - 1.3e-22 80.5 0.2 1.3e-22 80.5 0.2 1.8 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_2 PF04693.12 gi|73667631|ref|YP_303646.1| - 0.0012 18.1 0.6 0.0021 17.4 0.6 1.4 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 Phage_TAC_5 PF08890.11 gi|73667631|ref|YP_303646.1| - 0.076 13.0 1.3 0.14 12.1 1.3 1.4 1 0 0 1 1 1 0 Phage XkdN-like tail assembly chaperone protein, TAC CobD_Cbib PF03186.13 gi|73667632|ref|YP_303647.1| - 0.035 13.3 0.2 0.035 13.3 0.2 2.8 2 2 1 3 3 3 0 CobD/Cbib protein ABC_tran PF00005.27 gi|73667633|ref|YP_303648.1| - 5e-21 75.7 0.0 7.4e-21 75.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73667633|ref|YP_303648.1| - 3.6e-07 30.3 4.0 0.0044 16.9 0.3 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|73667633|ref|YP_303648.1| - 7.8e-05 23.3 0.3 0.00018 22.1 0.3 1.5 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73667633|ref|YP_303648.1| - 0.012 15.3 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|73667633|ref|YP_303648.1| - 0.04 14.3 0.0 0.077 13.4 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|73667633|ref|YP_303648.1| - 0.056 12.6 0.0 0.14 11.3 0.0 1.6 1 0 0 1 1 1 0 NB-ARC domain AAA_13 PF13166.6 gi|73667633|ref|YP_303648.1| - 0.086 11.5 1.5 0.93 8.1 0.1 2.1 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 gi|73667633|ref|YP_303648.1| - 0.13 11.1 0.8 1.3 7.7 0.4 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class NTPase_1 PF03266.15 gi|73667633|ref|YP_303648.1| - 0.14 12.0 0.1 2.5 8.0 0.0 2.3 2 1 0 2 2 2 0 NTPase SMC_N PF02463.19 gi|73667633|ref|YP_303648.1| - 0.16 11.4 1.0 0.22 10.9 0.0 1.7 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|73667633|ref|YP_303648.1| - 0.16 11.9 0.0 0.33 10.8 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase TruB_C_2 PF16198.5 gi|73667634|ref|YP_303649.1| - 8.3e-29 99.5 0.1 1.4e-28 98.8 0.1 1.4 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain TruB_N PF01509.18 gi|73667634|ref|YP_303649.1| - 1e-22 81.1 1.4 1.7e-18 67.4 1.5 3.5 2 1 0 2 2 2 1 TruB family pseudouridylate synthase (N terminal domain) PUA PF01472.20 gi|73667634|ref|YP_303649.1| - 9.7e-18 63.9 0.4 4.9e-17 61.7 0.1 2.1 2 0 0 2 2 2 1 PUA domain DKCLD PF08068.12 gi|73667634|ref|YP_303649.1| - 1.9e-17 63.1 0.1 4.4e-17 61.9 0.1 1.6 1 0 0 1 1 1 1 DKCLD (NUC011) domain Cytidylate_kin2 PF13189.6 gi|73667635|ref|YP_303650.1| - 1.4e-23 83.9 1.6 8.6e-23 81.4 1.6 1.8 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|73667635|ref|YP_303650.1| - 3.4e-11 43.8 0.1 6.9e-11 42.8 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|73667635|ref|YP_303650.1| - 2.3e-10 41.0 0.1 7e-10 39.5 0.1 1.7 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|73667635|ref|YP_303650.1| - 4.7e-08 33.0 0.5 0.0031 17.3 0.0 2.1 1 1 1 2 2 2 2 Cytidylate kinase ADK PF00406.22 gi|73667635|ref|YP_303650.1| - 0.00031 20.9 0.0 0.00085 19.4 0.0 1.7 1 1 1 2 2 2 1 Adenylate kinase AAA_28 PF13521.6 gi|73667635|ref|YP_303650.1| - 0.0023 18.2 0.0 0.0044 17.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain SKI PF01202.22 gi|73667635|ref|YP_303650.1| - 0.0066 16.6 0.5 0.048 13.8 0.5 2.0 1 1 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 gi|73667635|ref|YP_303650.1| - 0.015 15.4 0.0 0.053 13.7 0.0 1.8 1 1 1 2 2 2 0 AAA domain dNK PF01712.19 gi|73667635|ref|YP_303650.1| - 0.022 14.6 2.9 2.1 8.1 0.0 2.1 1 1 1 2 2 2 0 Deoxynucleoside kinase DUF1062 PF06353.12 gi|73667635|ref|YP_303650.1| - 0.023 15.5 0.3 0.034 15.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1062) DUF276 PF03434.13 gi|73667635|ref|YP_303650.1| - 0.031 13.4 1.3 0.048 12.8 1.3 1.2 1 0 0 1 1 1 0 DUF276 Sulfotransfer_3 PF13469.6 gi|73667635|ref|YP_303650.1| - 0.043 14.2 0.0 0.066 13.6 0.0 1.6 1 1 0 1 1 1 0 Sulfotransferase family CoaE PF01121.20 gi|73667635|ref|YP_303650.1| - 0.066 12.9 0.1 2.1 8.0 0.0 2.3 1 1 1 2 2 2 0 Dephospho-CoA kinase AAA PF00004.29 gi|73667635|ref|YP_303650.1| - 0.12 12.8 0.0 0.24 11.8 0.0 1.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) EMC3_TMCO1 PF01956.16 gi|73667636|ref|YP_303651.1| - 2.1e-48 164.3 9.3 2.7e-48 163.9 9.3 1.1 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like HPIH PF13323.6 gi|73667636|ref|YP_303651.1| - 0.15 11.9 1.1 0.24 11.3 0.3 1.7 1 1 1 2 2 2 0 N-terminal domain with HPIH motif MscL PF01741.18 gi|73667636|ref|YP_303651.1| - 0.21 11.9 1.4 0.35 11.2 1.4 1.5 1 1 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL MarR_2 PF12802.7 gi|73667637|ref|YP_303652.1| - 1.5e-05 24.8 0.0 1.8e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 MarR family DUF505 PF04458.12 gi|73667637|ref|YP_303652.1| - 2.5e-05 22.9 0.0 2.5e-05 22.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF505) HxlR PF01638.17 gi|73667637|ref|YP_303652.1| - 0.0003 20.6 0.1 0.00042 20.1 0.1 1.3 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_24 PF13412.6 gi|73667637|ref|YP_303652.1| - 0.0004 19.9 0.0 0.0006 19.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 gi|73667637|ref|YP_303652.1| - 0.00068 19.5 0.1 0.0016 18.4 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.22 gi|73667637|ref|YP_303652.1| - 0.00068 19.5 0.0 0.001 19.0 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|73667637|ref|YP_303652.1| - 0.00077 19.3 0.0 0.0011 18.8 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|73667637|ref|YP_303652.1| - 0.0015 18.5 0.0 0.0021 18.0 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.6 gi|73667637|ref|YP_303652.1| - 0.0028 18.1 0.0 0.0042 17.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.6 gi|73667637|ref|YP_303652.1| - 0.0029 17.7 0.1 0.0043 17.2 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF2250 PF10007.9 gi|73667637|ref|YP_303652.1| - 0.0063 16.6 0.1 0.039 14.1 0.0 1.9 1 1 1 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) DUF4364 PF14277.6 gi|73667637|ref|YP_303652.1| - 0.008 15.9 0.1 0.01 15.6 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_20 PF12840.7 gi|73667637|ref|YP_303652.1| - 0.013 15.5 0.0 0.018 15.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain TFIIE_alpha PF02002.17 gi|73667637|ref|YP_303652.1| - 0.016 15.1 0.1 0.017 15.0 0.1 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit Replic_Relax PF13814.6 gi|73667637|ref|YP_303652.1| - 0.016 15.3 0.0 0.017 15.2 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation HTH_Crp_2 PF13545.6 gi|73667637|ref|YP_303652.1| - 0.02 14.9 0.0 0.025 14.6 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|73667637|ref|YP_303652.1| - 0.022 14.6 0.1 0.034 14.0 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|73667637|ref|YP_303652.1| - 0.022 14.7 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 HTH domain DUF1495 PF07381.11 gi|73667637|ref|YP_303652.1| - 0.027 14.3 0.1 0.55 10.1 0.1 2.0 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) Rio2_N PF09202.11 gi|73667637|ref|YP_303652.1| - 0.027 14.7 0.0 0.039 14.2 0.0 1.2 1 0 0 1 1 1 0 Rio2, N-terminal LexA_DNA_bind PF01726.16 gi|73667637|ref|YP_303652.1| - 0.034 13.9 0.0 0.06 13.1 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain Rrf2 PF02082.20 gi|73667637|ref|YP_303652.1| - 0.036 14.4 0.0 0.052 13.9 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator PadR PF03551.14 gi|73667637|ref|YP_303652.1| - 0.058 13.4 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DprA_WH PF17782.1 gi|73667637|ref|YP_303652.1| - 0.065 13.4 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 DprA winged helix domain HTH_29 PF13551.6 gi|73667637|ref|YP_303652.1| - 0.076 13.0 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn helix Phage_rep_org_N PF09681.10 gi|73667637|ref|YP_303652.1| - 0.084 12.8 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) Ribosomal_S19e PF01090.19 gi|73667637|ref|YP_303652.1| - 0.092 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S19e FeoC PF09012.10 gi|73667637|ref|YP_303652.1| - 0.11 12.6 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 FeoC like transcriptional regulator ADK PF00406.22 gi|73667638|ref|YP_303653.1| - 4.2e-62 208.7 0.0 5.1e-62 208.4 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 gi|73667638|ref|YP_303653.1| - 1.5e-29 103.1 0.0 2.8e-29 102.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain ADK_lid PF05191.14 gi|73667638|ref|YP_303653.1| - 4.8e-14 52.0 2.0 9e-14 51.2 2.0 1.5 1 0 0 1 1 1 1 Adenylate kinase, active site lid Hydin_ADK PF17213.3 gi|73667638|ref|YP_303653.1| - 3.7e-07 30.6 2.9 0.00091 19.6 0.1 2.6 2 1 1 3 3 3 2 Hydin Adenylate kinase-like domain AAA_18 PF13238.6 gi|73667638|ref|YP_303653.1| - 9.9e-06 26.1 0.0 4.5e-05 24.0 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|73667638|ref|YP_303653.1| - 8.3e-05 22.8 0.0 0.00027 21.1 0.0 1.7 2 0 0 2 2 2 1 AAA domain Cytidylate_kin PF02224.18 gi|73667638|ref|YP_303653.1| - 0.028 14.2 0.0 0.054 13.2 0.0 1.5 1 0 0 1 1 1 0 Cytidylate kinase AAA PF00004.29 gi|73667638|ref|YP_303653.1| - 0.039 14.4 0.1 0.11 12.9 0.0 1.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|73667638|ref|YP_303653.1| - 0.064 13.0 0.1 0.17 11.6 0.1 1.9 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|73667638|ref|YP_303653.1| - 0.092 13.0 0.0 0.21 11.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 gi|73667638|ref|YP_303653.1| - 0.092 12.4 0.1 13 5.5 0.0 2.7 3 0 0 3 3 3 0 Thymidylate kinase Mg_chelatase PF01078.21 gi|73667638|ref|YP_303653.1| - 0.19 11.1 0.0 0.3 10.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI SecY PF00344.20 gi|73667639|ref|YP_303654.1| - 2.8e-65 220.6 22.7 3.3e-65 220.3 22.7 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|73667639|ref|YP_303654.1| - 1.1e-10 41.2 2.5 1.9e-10 40.4 0.8 2.4 2 0 0 2 2 2 1 Plug domain of Sec61p Ribosomal_L27A PF00828.19 gi|73667640|ref|YP_303655.1| - 3.5e-23 82.7 0.1 4.8e-23 82.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 gi|73667640|ref|YP_303655.1| - 0.14 11.6 0.0 0.23 10.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L30 PF00327.20 gi|73667641|ref|YP_303656.1| - 3.5e-14 52.4 0.3 6.6e-14 51.5 0.3 1.5 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e FeS PF04060.13 gi|73667641|ref|YP_303656.1| - 0.15 11.8 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Putative Fe-S cluster Ribosomal_S5 PF00333.20 gi|73667642|ref|YP_303657.1| - 4.1e-24 84.3 0.2 1.1e-23 83.0 0.2 1.7 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|73667642|ref|YP_303657.1| - 4.3e-23 80.6 0.4 7.4e-23 79.8 0.4 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L5e PF17144.4 gi|73667643|ref|YP_303658.1| - 1.2e-27 96.9 0.6 2.3e-18 66.7 0.3 2.2 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18p PF00861.22 gi|73667643|ref|YP_303658.1| - 0.00014 22.2 0.0 0.00019 21.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L19e PF01280.20 gi|73667644|ref|YP_303659.1| - 5.2e-57 192.0 6.1 5.8e-57 191.8 6.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Lant_dehydr_C PF14028.6 gi|73667644|ref|YP_303659.1| - 0.021 14.4 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term DUF1943 PF09172.11 gi|73667644|ref|YP_303659.1| - 0.18 11.0 0.0 0.18 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Ribosomal_L32e PF01655.18 gi|73667645|ref|YP_303660.1| - 1.8e-34 118.4 0.0 2.3e-34 118.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L6 PF00347.23 gi|73667646|ref|YP_303661.1| - 2.1e-27 95.6 5.4 9.1e-14 51.9 0.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Ribosomal_S8 PF00410.19 gi|73667647|ref|YP_303662.1| - 4e-27 94.7 0.0 4.8e-27 94.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 gi|73667648|ref|YP_303663.1| - 3.4e-15 55.5 1.8 3.8e-15 55.4 1.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-P11 PF03854.14 gi|73667648|ref|YP_303663.1| - 0.00047 19.8 1.6 0.00058 19.5 1.6 1.1 1 0 0 1 1 1 1 P-11 zinc finger DUF4428 PF14471.6 gi|73667648|ref|YP_303663.1| - 0.0007 19.5 0.4 0.0016 18.3 0.4 1.6 1 1 1 2 2 2 2 Domain of unknown function (DUF4428) DUF1451 PF07295.11 gi|73667648|ref|YP_303663.1| - 0.012 15.6 0.4 0.014 15.4 0.4 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain FYVE_2 PF02318.16 gi|73667648|ref|YP_303663.1| - 0.02 15.1 0.4 0.021 15.0 0.4 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger Rsm1 PF08600.10 gi|73667648|ref|YP_303663.1| - 1.8 8.8 4.7 10 6.4 0.4 2.0 1 1 1 2 2 2 0 Rsm1-like zf-CCHC_2 PF13696.6 gi|73667648|ref|YP_303663.1| - 2.7 7.9 8.2 4.9 7.1 1.8 2.2 2 0 0 2 2 2 0 Zinc knuckle Ribosomal_L5_C PF00673.21 gi|73667649|ref|YP_303664.1| - 1.8e-25 88.9 0.0 2.5e-25 88.5 0.0 1.3 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|73667649|ref|YP_303664.1| - 1.3e-16 60.7 0.1 2.3e-16 59.8 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S4e PF00900.20 gi|73667650|ref|YP_303665.1| - 1.3e-22 79.5 0.2 2.2e-22 78.7 0.2 1.4 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.12 gi|73667650|ref|YP_303665.1| - 4.2e-07 30.0 2.8 7.7e-07 29.1 2.8 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 gi|73667650|ref|YP_303665.1| - 1.1e-06 28.2 0.6 4.8e-06 26.2 0.1 2.3 3 0 0 3 3 3 1 S4 domain KOW PF00467.29 gi|73667650|ref|YP_303665.1| - 0.0012 18.7 0.4 0.0012 18.7 0.4 1.9 2 0 0 2 2 2 1 KOW motif DUF3994 PF13159.6 gi|73667650|ref|YP_303665.1| - 0.035 14.7 0.1 0.062 13.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3994) Ribosomal_L26 PF16906.5 gi|73667651|ref|YP_303666.1| - 6.3e-29 100.3 0.2 8e-29 99.9 0.2 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|73667651|ref|YP_303666.1| - 5.8e-06 26.1 0.6 1.2e-05 25.1 0.6 1.5 1 0 0 1 1 1 1 KOW motif Ribosomal_L14 PF00238.19 gi|73667652|ref|YP_303667.1| - 2e-35 121.5 1.0 2.3e-35 121.4 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_S17 PF00366.20 gi|73667653|ref|YP_303668.1| - 3.6e-28 97.4 5.3 4.4e-28 97.2 5.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|73667653|ref|YP_303668.1| - 0.00038 20.8 0.0 0.00089 19.6 0.0 1.7 2 0 0 2 2 2 1 Ribosomal_S17 N-terminal UPF0086 PF01868.16 gi|73667654|ref|YP_303669.1| - 8.1e-22 76.9 0.0 9.4e-22 76.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_L29 PF00831.23 gi|73667655|ref|YP_303670.1| - 8.2e-18 64.1 0.3 1e-17 63.8 0.3 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein Ribosomal_S3_C PF00189.20 gi|73667656|ref|YP_303671.1| - 1.5e-21 76.7 0.2 3.5e-21 75.5 0.1 1.7 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|73667656|ref|YP_303671.1| - 3.4e-15 55.6 0.0 7.7e-15 54.5 0.0 1.6 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|73667656|ref|YP_303671.1| - 0.039 13.8 1.8 0.2 11.5 0.1 2.8 3 0 0 3 3 3 0 KH domain Spore_coat_CotO PF14153.6 gi|73667656|ref|YP_303671.1| - 8.3 6.3 15.8 14 5.6 15.8 1.3 1 0 0 1 1 1 0 Spore coat protein CotO Ribosomal_L22 PF00237.19 gi|73667657|ref|YP_303672.1| - 1.6e-32 111.8 0.1 1.9e-32 111.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S19 PF00203.21 gi|73667658|ref|YP_303673.1| - 1.3e-25 89.1 0.4 1.9e-25 88.5 0.4 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Citrate_synt PF00285.21 gi|73667658|ref|YP_303673.1| - 0.093 11.8 0.0 0.098 11.7 0.0 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain Ribosomal_L2_C PF03947.18 gi|73667659|ref|YP_303674.1| - 2.6e-44 150.5 0.9 4.7e-44 149.6 0.9 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|73667659|ref|YP_303674.1| - 5e-17 61.6 0.0 1.5e-16 60.1 0.0 1.8 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L23 PF00276.20 gi|73667660|ref|YP_303675.1| - 1.7e-14 53.9 2.1 3.5e-14 52.9 2.1 1.5 1 1 0 1 1 1 1 Ribosomal protein L23 TALPID3 PF15324.6 gi|73667660|ref|YP_303675.1| - 0.073 10.7 0.1 0.078 10.7 0.1 1.0 1 0 0 1 1 1 0 Hedgehog signalling target Ribosomal_L4 PF00573.22 gi|73667661|ref|YP_303676.1| - 2.8e-50 170.7 0.1 3.2e-50 170.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.22 gi|73667662|ref|YP_303677.1| - 4.6e-83 279.2 0.3 1.3e-82 277.8 0.3 1.6 1 1 0 1 1 1 1 Ribosomal protein L3 Y_Y_Y PF07495.13 gi|73667664|ref|YP_303679.1| - 7.3e-05 22.7 0.8 1.1 9.2 0.0 4.1 3 1 1 4 4 4 2 Y_Y_Y domain GldM_C PF12080.8 gi|73667664|ref|YP_303679.1| - 0.004 17.4 2.1 0.0098 16.1 2.1 1.7 1 0 0 1 1 1 1 GldM C-terminal domain AglB_L1 PF18079.1 gi|73667664|ref|YP_303679.1| - 0.038 14.3 0.5 0.4 11.0 0.0 3.0 4 1 0 4 4 4 0 Archaeal glycosylation protein B long peripheral domain Vfa1 PF08432.10 gi|73667664|ref|YP_303679.1| - 4 7.7 9.7 11 6.3 9.7 1.7 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Y_Y_Y PF07495.13 gi|73667666|ref|YP_303681.1| - 0.0046 16.9 0.1 0.069 13.1 0.0 2.5 1 1 1 2 2 2 1 Y_Y_Y domain CCDC106 PF15794.5 gi|73667666|ref|YP_303681.1| - 0.14 11.8 8.0 0.21 11.3 8.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 CKAP2_C PF15297.6 gi|73667666|ref|YP_303681.1| - 0.47 9.5 10.2 0.72 8.9 10.2 1.2 1 0 0 1 1 1 0 Cytoskeleton-associated protein 2 C-terminus HlyD_2 PF12700.7 gi|73667666|ref|YP_303681.1| - 1 8.1 14.5 0.062 12.0 0.4 2.3 1 1 0 2 2 2 0 HlyD family secretion protein Vfa1 PF08432.10 gi|73667666|ref|YP_303681.1| - 1.5 9.1 9.5 2.4 8.5 9.5 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 UPF0242 PF06785.11 gi|73667666|ref|YP_303681.1| - 2 8.4 10.7 0.15 12.2 5.5 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Macoilin PF09726.9 gi|73667666|ref|YP_303681.1| - 2.3 6.7 11.8 2.6 6.5 11.8 1.1 1 0 0 1 1 1 0 Macoilin family Presenilin PF01080.17 gi|73667666|ref|YP_303681.1| - 7.8 5.1 8.4 11 4.7 8.4 1.2 1 0 0 1 1 1 0 Presenilin FAM76 PF16046.5 gi|73667666|ref|YP_303681.1| - 9 5.6 10.1 13 5.0 10.1 1.1 1 0 0 1 1 1 0 FAM76 protein AlgF PF11182.8 gi|73667667|ref|YP_303682.1| - 0.012 15.5 0.1 0.022 14.6 0.1 1.5 1 0 0 1 1 1 0 Alginate O-acetyl transferase AlgF CsrA PF02599.16 gi|73667667|ref|YP_303682.1| - 0.024 14.6 0.3 1.6 8.7 0.0 2.5 2 0 0 2 2 2 0 Global regulator protein family COXG PF06240.13 gi|73667667|ref|YP_303682.1| - 0.076 12.8 0.4 0.21 11.3 0.1 1.9 2 0 0 2 2 2 0 Carbon monoxide dehydrogenase subunit G (CoxG) EF-hand_1 PF00036.32 gi|73667667|ref|YP_303682.1| - 0.093 12.3 0.0 0.19 11.4 0.0 1.5 1 0 0 1 1 1 0 EF hand Ribosomal_L31 PF01197.18 gi|73667668|ref|YP_303683.1| - 0.071 13.3 0.0 0.18 12.1 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein L31 RAP PF08373.10 gi|73667668|ref|YP_303683.1| - 0.15 12.2 0.0 0.5 10.5 0.0 1.9 1 0 0 1 1 1 0 RAP domain DHHA1 PF02272.19 gi|73667669|ref|YP_303684.1| - 5.3e-06 26.9 0.0 1e-05 26.0 0.0 1.5 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.20 gi|73667669|ref|YP_303684.1| - 0.01 16.1 0.0 0.017 15.3 0.0 1.3 1 0 0 1 1 1 0 DHH family DZR PF12773.7 gi|73667670|ref|YP_303685.1| - 0.02 14.9 7.1 2 8.5 7.1 2.8 1 1 0 1 1 1 0 Double zinc ribbon NOB1_Zn_bind PF08772.11 gi|73667670|ref|YP_303685.1| - 0.041 14.1 4.9 0.71 10.1 0.0 2.7 3 0 0 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 gi|73667670|ref|YP_303685.1| - 0.043 13.6 4.7 4 7.3 1.7 2.7 2 1 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|73667670|ref|YP_303685.1| - 0.047 13.1 2.6 2.4 7.7 0.0 2.9 3 0 0 3 3 3 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|73667670|ref|YP_303685.1| - 0.05 13.5 2.2 3.5 7.6 0.2 3.1 3 0 0 3 3 3 0 Nudix N-terminal zf-NADH-PPase PF09297.11 gi|73667670|ref|YP_303685.1| - 0.096 12.4 1.8 0.28 10.9 0.2 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf_UBZ PF18439.1 gi|73667670|ref|YP_303685.1| - 0.3 10.7 4.3 0.47 10.1 0.1 2.7 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-C2HE PF16278.5 gi|73667670|ref|YP_303685.1| - 0.34 11.4 5.2 11 6.5 1.9 3.4 2 1 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger A2L_zn_ribbon PF08792.10 gi|73667670|ref|YP_303685.1| - 0.51 10.1 10.1 1.8 8.4 0.1 3.8 4 0 0 4 4 4 0 A2L zinc ribbon domain zf-BED PF02892.15 gi|73667670|ref|YP_303685.1| - 1.4 9.0 4.6 2.5 8.2 0.0 2.9 3 0 0 3 3 3 0 BED zinc finger zf-RING_5 PF14634.6 gi|73667670|ref|YP_303685.1| - 1.4 8.9 8.5 5.8 7.0 1.2 3.2 3 0 0 3 3 3 0 zinc-RING finger domain zf-dskA_traR PF01258.17 gi|73667670|ref|YP_303685.1| - 3.5 7.7 14.3 4.6 7.3 0.1 4.0 4 0 0 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger Cyt_bd_oxida_II PF02322.15 gi|73667671|ref|YP_303686.1| - 6.4e-81 272.0 39.5 7.2e-81 271.9 39.5 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II Cyt_bd_oxida_I PF01654.17 gi|73667672|ref|YP_303687.1| - 2.7e-155 517.1 29.7 3e-155 516.9 29.7 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I FliP PF00813.20 gi|73667672|ref|YP_303687.1| - 0.0033 17.3 1.3 0.19 11.6 0.1 2.5 2 0 0 2 2 2 2 FliP family Capsid-VNN PF11729.8 gi|73667672|ref|YP_303687.1| - 0.18 10.8 0.0 0.28 10.2 0.0 1.2 1 0 0 1 1 1 0 nodavirus capsid protein FUR PF01475.19 gi|73667673|ref|YP_303688.1| - 3.2e-30 104.8 0.3 3.2e-30 104.8 0.3 1.3 2 0 0 2 2 2 1 Ferric uptake regulator family Penicillinase_R PF03965.16 gi|73667673|ref|YP_303688.1| - 0.0011 19.3 0.0 0.0015 18.8 0.0 1.2 1 0 0 1 1 1 1 Penicillinase repressor PadR PF03551.14 gi|73667673|ref|YP_303688.1| - 0.0038 17.2 0.0 0.013 15.4 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_20 PF12840.7 gi|73667673|ref|YP_303688.1| - 0.011 15.8 0.0 0.02 15.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|73667673|ref|YP_303688.1| - 0.032 14.1 0.0 0.08 12.8 0.0 1.6 1 1 0 1 1 1 0 MarR family HTH_5 PF01022.20 gi|73667673|ref|YP_303688.1| - 0.036 13.9 0.0 0.4 10.6 0.0 2.3 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF2250 PF10007.9 gi|73667673|ref|YP_303688.1| - 0.045 13.9 0.0 0.092 12.9 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) TrmB PF01978.19 gi|73667673|ref|YP_303688.1| - 0.059 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Prok-RING_4 PF14447.6 gi|73667673|ref|YP_303688.1| - 0.06 13.2 0.9 0.22 11.4 0.1 2.0 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 HTH_27 PF13463.6 gi|73667673|ref|YP_303688.1| - 0.079 13.5 0.1 0.71 10.4 0.1 2.3 2 1 0 2 2 2 0 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|73667673|ref|YP_303688.1| - 0.099 12.5 0.0 0.43 10.4 0.0 1.8 1 1 0 1 1 1 0 IclR helix-turn-helix domain DUF4734 PF15881.5 gi|73667673|ref|YP_303688.1| - 0.13 12.5 0.0 0.29 11.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4734) LCM PF04072.14 gi|73667674|ref|YP_303689.1| - 5e-52 176.6 0.0 6.5e-52 176.2 0.0 1.1 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase TetR_C_24 PF17932.1 gi|73667674|ref|YP_303689.1| - 0.054 13.8 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Methyltransf_11 PF08241.12 gi|73667675|ref|YP_303690.1| - 2e-28 98.9 0.0 2.6e-28 98.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73667675|ref|YP_303690.1| - 1e-24 87.1 0.0 1.3e-24 86.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73667675|ref|YP_303690.1| - 5.3e-24 84.8 0.0 7e-24 84.4 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|73667675|ref|YP_303690.1| - 7.3e-23 81.1 0.0 8e-23 80.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73667675|ref|YP_303690.1| - 3.7e-20 72.5 0.0 4.7e-20 72.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73667675|ref|YP_303690.1| - 1.4e-13 51.0 0.0 1.6e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|73667675|ref|YP_303690.1| - 1.2e-08 34.9 0.0 1.6e-08 34.5 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_8 PF05148.15 gi|73667675|ref|YP_303690.1| - 1.6e-06 28.1 0.0 3.1e-06 27.2 0.0 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase RrnaAD PF00398.20 gi|73667675|ref|YP_303690.1| - 3.3e-06 26.4 0.0 1e-05 24.8 0.0 1.5 1 1 1 2 2 2 1 Ribosomal RNA adenine dimethylase CMAS PF02353.20 gi|73667675|ref|YP_303690.1| - 5.4e-06 25.9 0.0 6.6e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|73667675|ref|YP_303690.1| - 1.9e-05 24.2 0.0 0.00067 19.2 0.0 2.0 2 0 0 2 2 2 1 Putative methyltransferase FtsJ PF01728.19 gi|73667675|ref|YP_303690.1| - 4.4e-05 23.6 0.0 9.1e-05 22.6 0.0 1.6 1 1 0 1 1 1 1 FtsJ-like methyltransferase MetW PF07021.12 gi|73667675|ref|YP_303690.1| - 4.5e-05 23.1 0.1 0.00015 21.4 0.1 1.7 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW NodS PF05401.11 gi|73667675|ref|YP_303690.1| - 9.7e-05 22.1 0.0 0.00013 21.6 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) DREV PF05219.12 gi|73667675|ref|YP_303690.1| - 9.8e-05 21.6 0.0 0.00013 21.1 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase GCD14 PF08704.10 gi|73667675|ref|YP_303690.1| - 0.00012 21.8 0.0 0.00013 21.7 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_2 PF00891.18 gi|73667675|ref|YP_303690.1| - 0.00013 21.3 0.0 0.00017 21.0 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_29 PF03141.16 gi|73667675|ref|YP_303690.1| - 0.0003 19.5 0.0 0.00038 19.1 0.0 1.0 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltr_RsmB-F PF01189.17 gi|73667675|ref|YP_303690.1| - 0.00077 19.2 0.0 0.0014 18.3 0.0 1.4 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_24 PF13578.6 gi|73667675|ref|YP_303690.1| - 0.0009 20.2 0.0 0.0013 19.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 gi|73667675|ref|YP_303690.1| - 0.00099 18.1 0.0 0.0012 17.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MTS PF05175.14 gi|73667675|ref|YP_303690.1| - 0.0035 16.9 0.0 0.0065 16.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|73667675|ref|YP_303690.1| - 0.012 15.5 0.0 0.017 15.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|73667675|ref|YP_303690.1| - 0.025 14.0 0.0 0.029 13.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.18 gi|73667675|ref|YP_303690.1| - 0.04 13.6 0.1 1.3 8.7 0.1 2.2 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Fibrillarin PF01269.17 gi|73667675|ref|YP_303690.1| - 0.062 12.4 0.0 0.09 11.9 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin NNMT_PNMT_TEMT PF01234.17 gi|73667675|ref|YP_303690.1| - 0.11 11.6 0.0 0.17 11.0 0.0 1.3 1 1 0 1 1 1 0 NNMT/PNMT/TEMT family rRNA_methylase PF06962.12 gi|73667675|ref|YP_303690.1| - 0.12 12.4 0.0 5.3 7.0 0.0 2.1 2 0 0 2 2 2 0 Putative rRNA methylase Kelch_4 PF13418.6 gi|73667676|ref|YP_303691.1| - 2.6e-05 24.2 2.8 14 5.8 0.0 6.4 6 1 1 7 7 7 2 Galactose oxidase, central domain DPPIV_N PF00930.21 gi|73667676|ref|YP_303691.1| - 0.00012 20.9 13.6 2 7.1 0.1 5.1 2 1 3 5 5 5 5 Dipeptidyl peptidase IV (DPP IV) N-terminal region NUMOD1 PF07453.13 gi|73667676|ref|YP_303691.1| - 0.0022 18.2 13.7 3 8.2 0.0 6.4 6 0 0 6 6 6 2 NUMOD1 domain LptF_LptG PF03739.14 gi|73667676|ref|YP_303691.1| - 0.43 9.4 10.2 0.38 9.5 1.5 3.0 1 1 2 3 3 3 0 Lipopolysaccharide export system permease LptF/LptG Pentapeptide_3 PF13576.6 gi|73667677|ref|YP_303692.1| - 6.7e-28 96.6 103.6 4.5e-06 26.7 10.0 9.5 5 3 6 11 11 11 10 Pentapeptide repeats (9 copies) DUF1897 PF09005.10 gi|73667677|ref|YP_303692.1| - 0.032 13.7 0.2 0.061 12.8 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1897) DUF98 PF01947.16 gi|73667678|ref|YP_303693.1| - 5.1e-20 72.0 0.0 7.1e-20 71.5 0.0 1.2 1 0 0 1 1 1 1 p-hydroxybenzoic acid synthase UTRA PF07702.13 gi|73667678|ref|YP_303693.1| - 1e-05 25.4 0.1 1.4e-05 25.0 0.1 1.2 1 0 0 1 1 1 1 UTRA domain Chor_lyase PF04345.13 gi|73667678|ref|YP_303693.1| - 0.096 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Chorismate lyase DUF5611 PF18446.1 gi|73667679|ref|YP_303694.1| - 9.8e-35 119.5 1.5 1.1e-34 119.4 1.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5611) AIRS PF00586.24 gi|73667681|ref|YP_303696.1| - 1.7e-18 67.1 1.0 3.1e-18 66.2 1.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|73667681|ref|YP_303696.1| - 4.4e-18 65.9 0.0 7.8e-18 65.1 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain SH3_3 PF08239.11 gi|73667681|ref|YP_303696.1| - 0.013 15.8 0.0 3.1 8.1 0.0 2.7 2 0 0 2 2 2 0 Bacterial SH3 domain Fer4 PF00037.27 gi|73667682|ref|YP_303697.1| - 7.1e-18 63.6 17.6 5.8e-09 35.4 5.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73667682|ref|YP_303697.1| - 6.9e-14 51.2 18.6 1.9e-07 30.9 4.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73667682|ref|YP_303697.1| - 7.1e-12 44.7 15.5 1.8e-06 27.7 4.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73667682|ref|YP_303697.1| - 1.8e-11 44.0 25.8 8.5e-09 35.4 14.5 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73667682|ref|YP_303697.1| - 2.9e-11 43.3 11.2 3.9e-11 43.0 11.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73667682|ref|YP_303697.1| - 1.6e-10 41.4 13.0 4.9e-10 39.9 13.3 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73667682|ref|YP_303697.1| - 2.6e-10 40.0 12.1 3.7e-05 23.9 1.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73667682|ref|YP_303697.1| - 2.3e-09 38.0 11.8 7.6e-05 23.6 3.0 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|73667682|ref|YP_303697.1| - 1.3e-08 34.8 14.4 0.00043 20.4 3.1 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73667682|ref|YP_303697.1| - 5.7e-07 30.0 24.0 0.0043 17.6 3.2 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73667682|ref|YP_303697.1| - 4.3e-06 27.1 13.5 0.0016 18.8 2.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73667682|ref|YP_303697.1| - 1.3e-05 25.6 16.4 0.013 16.0 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|73667682|ref|YP_303697.1| - 1.8e-05 25.5 7.9 0.013 16.3 2.0 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73667682|ref|YP_303697.1| - 2.6e-05 24.8 18.3 0.0087 16.9 4.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|73667682|ref|YP_303697.1| - 0.0015 19.3 16.7 0.48 11.2 16.7 2.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_11 PF13247.6 gi|73667682|ref|YP_303697.1| - 0.004 17.2 5.5 0.0041 17.2 5.5 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73667682|ref|YP_303697.1| - 0.019 15.1 12.7 0.038 14.2 12.7 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain DUF899 PF05988.12 gi|73667682|ref|YP_303697.1| - 2.6 7.5 3.5 0.63 9.5 1.0 1.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF899) ETF_QO PF05187.13 gi|73667682|ref|YP_303697.1| - 7.1 6.8 8.9 8.3 6.6 2.5 2.0 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Radical_SAM PF04055.21 gi|73667683|ref|YP_303698.1| - 6.2e-26 91.7 0.5 9.6e-26 91.1 0.1 1.5 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|73667683|ref|YP_303698.1| - 2.4e-05 24.4 0.6 5.4e-05 23.3 0.1 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|73667683|ref|YP_303698.1| - 0.0046 17.2 0.1 0.013 15.7 0.1 1.8 1 1 0 1 1 1 1 4Fe-4S single cluster domain PTPS PF01242.19 gi|73667684|ref|YP_303699.1| - 2.4e-27 95.3 0.0 3e-27 95.0 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Radical_SAM PF04055.21 gi|73667685|ref|YP_303700.1| - 5.2e-11 43.2 0.1 1e-10 42.3 0.1 1.5 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|73667685|ref|YP_303700.1| - 4.7e-09 36.4 0.2 1.9e-08 34.5 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|73667685|ref|YP_303700.1| - 6.1e-07 29.8 0.1 1.4e-06 28.6 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain DUF366 PF04017.12 gi|73667686|ref|YP_303701.1| - 1.1e-72 243.4 0.8 1.2e-72 243.3 0.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) QueC PF06508.13 gi|73667687|ref|YP_303702.1| - 4.4e-60 202.8 0.0 5.1e-60 202.6 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|73667687|ref|YP_303702.1| - 5.9e-06 26.2 0.0 9e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.14 gi|73667687|ref|YP_303702.1| - 0.00026 20.6 0.0 0.011 15.3 0.0 2.1 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.20 gi|73667687|ref|YP_303702.1| - 0.00046 20.0 0.0 0.0041 16.9 0.0 2.0 2 0 0 2 2 2 1 PP-loop family tRNA_Me_trans PF03054.16 gi|73667687|ref|YP_303702.1| - 0.077 11.8 0.0 0.12 11.1 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase Phage_pRha PF09669.10 gi|73667687|ref|YP_303702.1| - 0.13 12.8 0.0 0.75 10.4 0.0 2.1 1 1 0 1 1 1 0 Phage regulatory protein Rha (Phage_pRha) NAD_synthase PF02540.17 gi|73667687|ref|YP_303702.1| - 0.15 11.2 0.0 0.23 10.6 0.0 1.3 1 0 0 1 1 1 0 NAD synthase Metallophos_2 PF12850.7 gi|73667688|ref|YP_303703.1| - 1.1e-27 97.2 0.1 1.3e-27 97.0 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|73667688|ref|YP_303703.1| - 8.5e-08 32.9 0.9 0.00012 22.7 0.1 2.1 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|73667688|ref|YP_303703.1| - 0.067 12.5 0.9 5.8 6.2 0.0 2.1 1 1 0 2 2 2 0 Metallophosphoesterase, calcineurin superfamily DGC PF08859.11 gi|73667689|ref|YP_303704.1| - 2.4e-25 88.7 0.1 2.9e-25 88.4 0.1 1.1 1 0 0 1 1 1 1 DGC domain Metallophos_2 PF12850.7 gi|73667690|ref|YP_303705.1| - 3.7e-31 108.5 0.0 4.7e-31 108.2 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|73667690|ref|YP_303705.1| - 8.1e-14 52.6 0.0 8.7e-14 52.5 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|73667690|ref|YP_303705.1| - 0.002 17.5 0.0 0.014 14.7 0.0 1.9 2 0 0 2 2 2 1 Metallophosphoesterase, calcineurin superfamily FBPase_2 PF06874.11 gi|73667690|ref|YP_303705.1| - 0.0075 14.6 0.6 0.026 12.8 0.2 1.9 1 1 1 2 2 2 1 Firmicute fructose-1,6-bisphosphatase Hydantoinase_A PF01968.18 gi|73667691|ref|YP_303706.1| - 1.2e-32 113.4 1.1 4.9e-31 108.1 0.1 2.6 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|73667691|ref|YP_303706.1| - 2.3e-30 105.6 4.9 6.5e-28 97.6 0.7 3.4 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|73667691|ref|YP_303706.1| - 2.5e-06 26.4 0.8 0.021 13.4 0.1 2.1 2 0 0 2 2 2 2 MutL protein ROK PF00480.20 gi|73667691|ref|YP_303706.1| - 0.013 14.9 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 ROK family BcrAD_BadFG PF01869.20 gi|73667691|ref|YP_303706.1| - 0.049 13.1 0.2 0.89 9.0 0.0 2.7 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family Methyltransf_12 PF08242.12 gi|73667692|ref|YP_303707.1| - 6e-16 59.0 0.0 1e-15 58.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73667692|ref|YP_303707.1| - 3.3e-14 53.4 0.0 6.2e-14 52.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73667692|ref|YP_303707.1| - 1.5e-10 41.6 0.0 2.3e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73667692|ref|YP_303707.1| - 8.4e-08 32.1 0.0 1.5e-07 31.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73667692|ref|YP_303707.1| - 1.1e-06 28.6 0.0 1.5e-06 28.1 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73667692|ref|YP_303707.1| - 2.5e-05 23.7 0.0 3.9e-05 23.1 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_2 PF00891.18 gi|73667692|ref|YP_303707.1| - 0.00061 19.1 0.0 0.00079 18.8 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain CMAS PF02353.20 gi|73667692|ref|YP_303707.1| - 0.0032 16.8 0.0 0.0042 16.4 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_5 PF01795.19 gi|73667692|ref|YP_303707.1| - 0.0079 15.7 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 MraW methylase family MTS PF05175.14 gi|73667692|ref|YP_303707.1| - 0.012 15.2 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|73667692|ref|YP_303707.1| - 0.07 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain GtrA PF04138.14 gi|73667693|ref|YP_303708.1| - 0.18 12.1 10.6 14 5.9 10.6 2.3 1 1 0 1 1 1 0 GtrA-like protein TauE PF01925.19 gi|73667694|ref|YP_303709.1| - 1.2e-21 77.5 13.4 1.3e-21 77.3 13.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DEAD PF00270.29 gi|73667695|ref|YP_303710.1| - 5.7e-49 166.3 0.0 2.7e-48 164.1 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|73667695|ref|YP_303710.1| - 2.1e-32 111.8 1.2 7e-31 106.8 0.1 3.3 4 0 0 4 4 4 1 Helicase conserved C-terminal domain DbpA PF03880.15 gi|73667695|ref|YP_303710.1| - 2.5e-15 56.2 0.1 1.5e-14 53.7 0.0 2.5 2 0 0 2 2 2 1 DbpA RNA binding domain ResIII PF04851.15 gi|73667695|ref|YP_303710.1| - 1e-09 38.7 0.0 2.4e-09 37.4 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 gi|73667695|ref|YP_303710.1| - 0.00039 19.8 0.0 0.0012 18.2 0.0 1.9 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit ERCC3_RAD25_C PF16203.5 gi|73667695|ref|YP_303710.1| - 0.00096 18.4 0.1 0.0017 17.6 0.1 1.4 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_30 PF13604.6 gi|73667695|ref|YP_303710.1| - 0.0082 15.9 0.0 0.021 14.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain UvrD-helicase PF00580.21 gi|73667695|ref|YP_303710.1| - 0.009 15.6 0.1 0.03 13.8 0.1 1.7 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain DUF2408 PF10303.9 gi|73667696|ref|YP_303711.1| - 0.031 14.8 0.1 0.039 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Fer4_7 PF12838.7 gi|73667697|ref|YP_303712.1| - 7.2e-13 48.9 34.4 8.2e-07 29.5 14.7 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73667697|ref|YP_303712.1| - 5.6e-11 41.8 15.0 7.5e-08 31.9 3.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73667697|ref|YP_303712.1| - 1.4e-10 41.1 21.4 1.7e-08 34.5 11.0 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73667697|ref|YP_303712.1| - 1.1e-08 35.1 12.8 1.6e-08 34.5 12.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73667697|ref|YP_303712.1| - 5.3e-07 29.4 10.3 6.2e-05 22.9 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73667697|ref|YP_303712.1| - 1.1e-06 28.6 11.0 1.7e-06 28.1 11.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73667697|ref|YP_303712.1| - 1.2e-06 28.3 19.2 2.1e-05 24.4 3.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73667697|ref|YP_303712.1| - 5.5e-06 27.2 11.4 0.0047 17.8 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|73667697|ref|YP_303712.1| - 5.5e-05 23.6 12.1 0.0093 16.5 1.4 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73667697|ref|YP_303712.1| - 0.00031 21.1 15.2 0.085 13.3 15.8 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73667697|ref|YP_303712.1| - 0.0016 19.2 21.5 0.038 14.9 3.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|73667697|ref|YP_303712.1| - 0.0017 19.1 7.3 0.12 13.2 2.2 2.6 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|73667697|ref|YP_303712.1| - 0.0018 18.7 13.4 0.12 13.0 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|73667697|ref|YP_303712.1| - 0.005 17.6 5.8 0.92 10.4 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73667697|ref|YP_303712.1| - 0.17 12.1 10.1 0.36 11.0 10.2 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73667697|ref|YP_303712.1| - 0.18 12.3 12.6 0.97 10.0 1.5 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 gi|73667697|ref|YP_303712.1| - 0.2 11.8 0.1 0.2 11.8 0.1 2.1 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Complex1_49kDa PF00346.19 gi|73667698|ref|YP_303713.1| - 2.7e-64 216.9 0.1 6.3e-48 163.2 0.1 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|73667698|ref|YP_303713.1| - 4.1e-15 55.7 2.1 1.1e-14 54.3 0.0 2.4 3 0 0 3 3 3 1 Nickel-dependent hydrogenase Complex1_30kDa PF00329.19 gi|73667699|ref|YP_303714.1| - 1.2e-06 29.1 0.0 1.4e-06 29.0 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Oxidored_q6 PF01058.22 gi|73667700|ref|YP_303715.1| - 1.2e-25 89.8 3.8 1.5e-25 89.5 3.8 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NADHdh PF00146.21 gi|73667701|ref|YP_303716.1| - 3.3e-42 144.8 20.9 4.6e-42 144.4 20.9 1.1 1 0 0 1 1 1 1 NADH dehydrogenase PRA1 PF03208.19 gi|73667701|ref|YP_303716.1| - 0.56 9.8 19.4 0.55 9.8 0.4 2.8 1 1 2 3 3 3 0 PRA1 family protein PHO4 PF01384.20 gi|73667701|ref|YP_303716.1| - 3.3 6.7 20.9 9.3e+03 -4.7 20.9 2.4 1 1 0 1 1 1 0 Phosphate transporter family Proton_antipo_M PF00361.20 gi|73667702|ref|YP_303717.1| - 2.1e-52 178.1 25.6 2.1e-52 178.1 25.6 2.2 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|73667702|ref|YP_303717.1| - 5.6e-08 32.7 4.0 5.9e-08 32.7 0.1 3.0 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ArsP_1 PF03773.13 gi|73667703|ref|YP_303718.1| - 9.2e-69 231.8 21.7 1e-68 231.6 21.7 1.0 1 0 0 1 1 1 1 Predicted permease DGC PF08859.11 gi|73667704|ref|YP_303719.1| - 3.7e-32 110.6 0.5 4.5e-32 110.3 0.5 1.1 1 0 0 1 1 1 1 DGC domain Thioredoxin_3 PF13192.6 gi|73667705|ref|YP_303720.1| - 1.4e-28 98.7 1.8 1.5e-28 98.6 1.8 1.0 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_4 PF13462.6 gi|73667705|ref|YP_303720.1| - 0.0011 19.1 1.0 0.025 14.7 0.1 2.0 1 1 1 2 2 2 2 Thioredoxin Glutaredoxin PF00462.24 gi|73667705|ref|YP_303720.1| - 0.0044 17.2 0.4 0.013 15.7 0.4 1.8 1 1 0 1 1 1 1 Glutaredoxin DUF1611 PF07755.11 gi|73667705|ref|YP_303720.1| - 0.0097 15.2 0.2 0.0097 15.2 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1611_C) P-loop domain ArsD PF06953.11 gi|73667705|ref|YP_303720.1| - 0.085 13.2 0.1 0.21 11.9 0.0 1.6 1 1 1 2 2 2 0 Arsenical resistance operon trans-acting repressor ArsD CorA PF01544.18 gi|73667706|ref|YP_303721.1| - 3.7e-60 203.7 6.8 4.2e-60 203.5 6.8 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein DUF4804 PF16062.5 gi|73667706|ref|YP_303721.1| - 0.027 13.3 1.7 0.039 12.8 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4804) Spore_YhaL PF14147.6 gi|73667706|ref|YP_303721.1| - 4.3 7.1 5.3 8.2 6.2 0.1 2.7 2 0 0 2 2 2 0 Sporulation protein YhaL Ammonium_transp PF00909.21 gi|73667707|ref|YP_303722.1| - 2.2e-105 352.6 38.5 2.5e-105 352.5 38.5 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Ammonium_transp PF00909.21 gi|73667708|ref|YP_303723.1| - 5.1e-119 397.5 38.2 5.7e-119 397.4 38.2 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.22 gi|73667709|ref|YP_303724.1| - 2.1e-32 111.8 0.4 2.4e-32 111.6 0.4 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Methyltransf_11 PF08241.12 gi|73667710|ref|YP_303725.1| - 1.1e-20 74.1 0.0 1.7e-20 73.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73667710|ref|YP_303725.1| - 1.3e-19 70.4 0.0 1.9e-19 70.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73667710|ref|YP_303725.1| - 4.8e-19 68.9 0.0 7.9e-19 68.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73667710|ref|YP_303725.1| - 9.3e-15 54.6 0.0 1.3e-14 54.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|73667710|ref|YP_303725.1| - 5.3e-14 52.8 0.0 8.6e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73667710|ref|YP_303725.1| - 7.8e-12 45.3 0.0 1.7e-11 44.2 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|73667710|ref|YP_303725.1| - 3.2e-08 33.2 0.0 1.3e-07 31.2 0.0 2.0 2 0 0 2 2 2 1 Putative methyltransferase MTS PF05175.14 gi|73667710|ref|YP_303725.1| - 3.1e-06 26.8 0.0 6.3e-06 25.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.18 gi|73667710|ref|YP_303725.1| - 3.4e-05 23.2 0.0 5.2e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_32 PF13679.6 gi|73667710|ref|YP_303725.1| - 0.0001 22.3 0.0 0.00016 21.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_29 PF03141.16 gi|73667710|ref|YP_303725.1| - 0.00012 20.8 0.0 0.00015 20.4 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_8 PF05148.15 gi|73667710|ref|YP_303725.1| - 0.00014 21.8 0.0 0.00023 21.1 0.0 1.5 1 1 0 1 1 1 1 Hypothetical methyltransferase PCMT PF01135.19 gi|73667710|ref|YP_303725.1| - 0.00039 20.2 0.0 0.00072 19.4 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 gi|73667710|ref|YP_303725.1| - 0.00091 18.7 0.0 0.0014 18.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 gi|73667710|ref|YP_303725.1| - 0.0014 18.0 0.0 0.002 17.5 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.7 gi|73667710|ref|YP_303725.1| - 0.0022 17.9 0.0 0.0045 16.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|73667710|ref|YP_303725.1| - 0.0096 15.5 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase DUF938 PF06080.12 gi|73667710|ref|YP_303725.1| - 0.093 12.5 0.0 0.21 11.3 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_9 PF08003.11 gi|73667710|ref|YP_303725.1| - 0.17 10.8 0.0 0.25 10.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) NNMT_PNMT_TEMT PF01234.17 gi|73667710|ref|YP_303725.1| - 0.19 10.9 0.0 14 4.7 0.0 2.2 2 0 0 2 2 2 0 NNMT/PNMT/TEMT family YdjM PF04307.14 gi|73667711|ref|YP_303726.1| - 2.7e-15 56.1 4.0 5.2e-15 55.2 4.0 1.6 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF3382 PF11862.8 gi|73667711|ref|YP_303726.1| - 0.047 14.0 0.5 0.22 11.8 0.1 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF3382) DUF4064 PF13273.6 gi|73667711|ref|YP_303726.1| - 2.9 8.2 14.0 0.37 11.1 0.3 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) Cytochrom_D1 PF02239.16 gi|73667712|ref|YP_303727.1| - 2.4e-15 55.9 6.0 8e-07 27.9 0.5 3.3 1 1 3 4 4 4 4 Cytochrome D1 heme domain Lactonase PF10282.9 gi|73667712|ref|YP_303727.1| - 8.6e-14 51.5 7.5 4.1e-05 23.0 0.7 3.4 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|73667712|ref|YP_303727.1| - 1.5e-13 50.9 9.6 3.8e-05 23.4 1.3 3.5 1 1 3 4 4 4 3 SMP-30/Gluconolactonase/LRE-like region PD40 PF07676.12 gi|73667712|ref|YP_303727.1| - 4.1e-13 48.9 0.8 0.93 9.5 0.2 6.8 6 1 0 6 6 6 3 WD40-like Beta Propeller Repeat Arylesterase PF01731.20 gi|73667712|ref|YP_303727.1| - 2.4e-08 34.1 10.2 0.57 10.4 0.1 5.7 3 2 2 5 5 5 4 Arylesterase Str_synth PF03088.16 gi|73667712|ref|YP_303727.1| - 8.9e-07 28.9 0.3 1.9 8.6 0.0 4.5 4 1 0 4 4 4 2 Strictosidine synthase NHL PF01436.21 gi|73667712|ref|YP_303727.1| - 5.6e-06 26.1 8.9 0.23 11.6 0.3 6.1 6 0 0 6 6 6 2 NHL repeat SBP56 PF05694.11 gi|73667712|ref|YP_303727.1| - 0.00028 19.8 0.1 0.84 8.4 0.0 4.6 1 1 2 4 4 4 1 56kDa selenium binding protein (SBP56) Arm-DNA-bind_3 PF13356.6 gi|73667712|ref|YP_303727.1| - 0.00064 20.1 0.0 3.1 8.3 0.0 4.6 1 1 1 2 2 2 1 Arm DNA-binding domain Me-amine-dh_H PF06433.11 gi|73667712|ref|YP_303727.1| - 0.00073 18.5 13.5 0.026 13.4 0.5 3.8 1 1 3 4 4 4 2 Methylamine dehydrogenase heavy chain (MADH) PCC_BT PF18140.1 gi|73667712|ref|YP_303727.1| - 0.0012 19.1 8.2 0.16 12.3 0.2 3.3 1 1 2 3 3 3 2 Propionyl-coenzyme A carboxylase BT domain DPPIV_N PF00930.21 gi|73667712|ref|YP_303727.1| - 0.0017 17.2 1.8 0.11 11.2 0.3 3.3 2 1 1 4 4 4 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region ANAPC4_WD40 PF12894.7 gi|73667712|ref|YP_303727.1| - 0.0057 16.9 4.1 2.3 8.6 0.1 4.7 2 2 3 5 5 5 1 Anaphase-promoting complex subunit 4 WD40 domain P_proprotein PF01483.20 gi|73667712|ref|YP_303727.1| - 0.036 14.1 0.2 46 4.1 0.0 4.7 4 1 2 6 6 6 0 Proprotein convertase P-domain baeRF_family8 PF18851.1 gi|73667712|ref|YP_303727.1| - 0.068 13.2 0.1 44 4.1 0.0 3.3 3 0 0 3 3 3 0 Bacterial archaeo-eukaryotic release factor family 8 DUF1905 PF08922.11 gi|73667712|ref|YP_303727.1| - 0.091 12.8 2.1 62 3.8 0.0 4.1 2 1 1 4 4 4 0 Domain of unknown function (DUF1905) ThaI PF15514.6 gi|73667712|ref|YP_303727.1| - 0.15 11.7 2.3 5.6 6.6 0.1 3.3 3 1 1 4 4 4 0 Restriction endonuclease ThaI VSG_B PF13206.6 gi|73667712|ref|YP_303727.1| - 0.2 10.9 0.0 0.28 10.4 0.0 1.2 1 0 0 1 1 1 0 Trypanosomal VSG domain Peptidase_S29 PF02907.15 gi|73667712|ref|YP_303727.1| - 1.2 8.9 7.7 7.9 6.2 0.3 3.5 2 1 1 3 3 3 0 Hepatitis C virus NS3 protease PQQ PF01011.21 gi|73667712|ref|YP_303727.1| - 6.9 6.8 11.6 4.6 7.3 0.1 4.8 5 0 0 5 5 5 0 PQQ enzyme repeat UPF0228 PF05727.11 gi|73667713|ref|YP_303728.1| - 3.6e-33 114.0 10.3 2.3e-32 111.4 9.0 2.2 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0228) AbrB-like PF14250.6 gi|73667713|ref|YP_303728.1| - 0.05 13.7 0.0 0.093 12.8 0.0 1.3 1 0 0 1 1 1 0 AbrB-like transcriptional regulator Peptidase_C39_2 PF13529.6 gi|73667714|ref|YP_303729.1| - 2.8e-10 40.9 0.6 9e-10 39.3 0.6 1.9 1 0 0 1 1 1 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|73667714|ref|YP_303729.1| - 3.2e-05 24.0 0.0 6.6e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 Peptidase_C39 PF03412.15 gi|73667714|ref|YP_303729.1| - 0.0053 16.6 0.0 0.011 15.5 0.0 1.5 1 0 0 1 1 1 1 Peptidase C39 family Oxidored_nitro PF00148.19 gi|73667715|ref|YP_303730.1| - 7.9e-141 469.4 0.0 9e-141 469.2 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 gi|73667716|ref|YP_303731.1| - 5.3e-115 384.3 0.0 6.1e-115 384.1 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Glyco_transf_4 PF13439.6 gi|73667716|ref|YP_303731.1| - 0.18 11.8 0.0 0.46 10.5 0.0 1.7 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Oxidored_nitro PF00148.19 gi|73667717|ref|YP_303732.1| - 2.8e-129 431.3 0.0 3.2e-129 431.2 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 gi|73667718|ref|YP_303733.1| - 6e-134 446.7 0.1 8.9e-134 446.2 0.1 1.3 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase P-II PF00543.22 gi|73667719|ref|YP_303734.1| - 1.4e-32 112.3 0.1 1.8e-32 112.0 0.1 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II P-II PF00543.22 gi|73667720|ref|YP_303735.1| - 3.5e-30 104.6 1.0 3.9e-30 104.5 1.0 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II GAPES1 PF17155.4 gi|73667720|ref|YP_303735.1| - 0.034 13.5 0.0 0.04 13.2 0.0 1.2 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain Fer4_NifH PF00142.18 gi|73667721|ref|YP_303736.1| - 1e-126 422.0 1.1 1.1e-126 421.8 1.1 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|73667721|ref|YP_303736.1| - 1.7e-12 47.5 0.0 7.7e-12 45.4 0.0 2.0 1 1 1 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|73667721|ref|YP_303736.1| - 9.5e-10 38.7 1.1 8.1e-09 35.6 0.4 2.3 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|73667721|ref|YP_303736.1| - 9.6e-08 31.8 0.3 3.2e-06 26.8 0.2 2.2 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|73667721|ref|YP_303736.1| - 9.3e-06 25.0 0.3 9.3e-06 25.0 0.3 1.7 2 0 0 2 2 2 1 Anion-transporting ATPase MeaB PF03308.16 gi|73667721|ref|YP_303736.1| - 0.0005 19.1 0.3 0.00069 18.7 0.3 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|73667721|ref|YP_303736.1| - 0.0068 16.1 0.3 0.013 15.2 0.3 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_24 PF13479.6 gi|73667721|ref|YP_303736.1| - 0.012 15.3 0.1 0.021 14.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain CBP_BcsQ PF06564.12 gi|73667721|ref|YP_303736.1| - 0.014 14.8 0.1 0.88 9.0 0.1 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|73667721|ref|YP_303736.1| - 0.021 14.1 0.3 0.074 12.3 0.1 1.8 2 0 0 2 2 2 0 ATPase MipZ RNA_helicase PF00910.22 gi|73667721|ref|YP_303736.1| - 0.038 14.4 0.5 0.075 13.4 0.1 1.7 2 0 0 2 2 2 0 RNA helicase DUF87 PF01935.17 gi|73667721|ref|YP_303736.1| - 0.048 13.7 0.1 0.089 12.9 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_22 PF13401.6 gi|73667721|ref|YP_303736.1| - 0.085 13.1 0.1 0.2 11.9 0.1 1.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|73667721|ref|YP_303736.1| - 0.12 12.9 0.4 0.2 12.2 0.1 1.5 2 0 0 2 2 1 0 ABC transporter AAA_10 PF12846.7 gi|73667721|ref|YP_303736.1| - 0.13 11.2 0.1 0.18 10.7 0.1 1.2 1 0 0 1 1 1 0 AAA-like domain ATP_bind_1 PF03029.17 gi|73667721|ref|YP_303736.1| - 0.17 11.6 0.2 0.32 10.8 0.2 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein CLP1_P PF16575.5 gi|73667721|ref|YP_303736.1| - 0.2 11.4 0.1 0.37 10.6 0.1 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop NB-ARC PF00931.22 gi|73667721|ref|YP_303736.1| - 0.24 10.5 0.4 0.35 10.0 0.4 1.2 1 0 0 1 1 1 0 NB-ARC domain DAO PF01266.24 gi|73667722|ref|YP_303737.1| - 4.6e-14 52.8 0.5 2.2e-06 27.5 0.2 2.1 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|73667722|ref|YP_303737.1| - 4e-12 46.1 0.7 6.2e-11 42.1 0.1 2.4 2 1 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.7 gi|73667722|ref|YP_303737.1| - 7.7e-09 35.4 0.5 1.8e-08 34.2 0.5 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|73667722|ref|YP_303737.1| - 3.8e-08 32.5 0.6 8.8e-08 31.2 0.1 1.7 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 gi|73667722|ref|YP_303737.1| - 7.4e-08 31.9 0.2 1.3e-07 31.1 0.2 1.3 1 1 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_2 PF07992.14 gi|73667722|ref|YP_303737.1| - 1.5e-07 31.0 0.2 3.2e-07 29.9 0.2 1.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|73667722|ref|YP_303737.1| - 4.7e-07 29.2 0.1 9.3e-07 28.3 0.0 1.5 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|73667722|ref|YP_303737.1| - 1.6e-06 28.2 0.1 5.1e-06 26.6 0.1 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|73667722|ref|YP_303737.1| - 3.2e-05 23.2 1.9 0.032 13.3 0.4 2.7 2 1 0 2 2 2 2 Lycopene cyclase protein Thi4 PF01946.17 gi|73667722|ref|YP_303737.1| - 4.7e-05 22.8 0.0 8.7e-05 21.9 0.0 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 gi|73667722|ref|YP_303737.1| - 0.00067 19.0 0.4 0.0036 16.6 0.1 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|73667722|ref|YP_303737.1| - 0.0009 18.2 0.5 0.089 11.6 0.1 2.7 1 1 1 2 2 2 1 Tryptophan halogenase AlaDh_PNT_C PF01262.21 gi|73667722|ref|YP_303737.1| - 0.014 14.7 0.0 0.041 13.2 0.0 1.8 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|73667722|ref|YP_303737.1| - 0.035 14.7 0.1 1.4 9.5 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|73667722|ref|YP_303737.1| - 0.039 13.8 0.0 0.2 11.5 0.0 2.0 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|73667722|ref|YP_303737.1| - 0.043 13.8 0.0 0.093 12.7 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TPR_1 PF00515.28 gi|73667723|ref|YP_303738.1| - 2.6e-13 49.2 0.5 1.2e-08 34.4 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73667723|ref|YP_303738.1| - 5.6e-12 44.9 0.5 1e-07 31.6 0.0 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73667723|ref|YP_303738.1| - 7e-11 41.6 0.2 4.3e-08 32.7 0.2 2.3 1 1 1 2 2 2 2 TPR repeat TPR_2 PF07719.17 gi|73667723|ref|YP_303738.1| - 2.6e-10 39.6 0.8 8e-07 28.7 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73667723|ref|YP_303738.1| - 1.4e-07 32.1 0.1 0.0013 19.3 0.0 2.0 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73667723|ref|YP_303738.1| - 1.7e-05 24.9 0.0 2.2e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73667723|ref|YP_303738.1| - 0.00012 22.2 0.2 0.027 14.8 0.0 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73667723|ref|YP_303738.1| - 0.00014 22.4 0.1 0.13 13.2 0.0 2.8 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73667723|ref|YP_303738.1| - 0.0042 17.3 0.1 0.01 16.1 0.0 1.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73667723|ref|YP_303738.1| - 0.0045 17.5 0.0 0.087 13.3 0.1 2.1 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73667723|ref|YP_303738.1| - 0.087 13.5 0.0 25 5.8 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73667723|ref|YP_303738.1| - 0.21 11.7 0.7 3.2 8.0 0.1 2.7 2 1 0 2 2 2 0 Tetratricopeptide repeat PK PF00224.21 gi|73667725|ref|YP_303740.1| - 5.8e-122 406.9 1.7 7.6e-122 406.5 1.7 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|73667725|ref|YP_303740.1| - 5.6e-24 84.6 0.0 3.3e-23 82.1 0.0 2.3 3 0 0 3 3 3 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 gi|73667725|ref|YP_303740.1| - 1e-05 24.8 0.6 2.6e-05 23.5 0.4 1.8 1 1 1 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family IMPDH PF00478.25 gi|73667725|ref|YP_303740.1| - 0.12 11.3 1.9 0.16 10.9 0.1 2.0 2 1 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain DUF5608 PF18356.1 gi|73667725|ref|YP_303740.1| - 0.14 12.2 0.0 0.34 10.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5608) DeoC PF01791.9 gi|73667726|ref|YP_303741.1| - 2e-55 188.0 0.0 2.5e-55 187.7 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase DZR PF12773.7 gi|73667727|ref|YP_303742.1| - 0.00047 20.1 0.3 0.00069 19.6 0.3 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc-ribbons_6 PF07191.12 gi|73667727|ref|YP_303742.1| - 0.0011 18.9 0.5 0.0016 18.4 0.5 1.2 1 0 0 1 1 1 1 zinc-ribbons C1_2 PF03107.16 gi|73667727|ref|YP_303742.1| - 0.0049 17.1 0.9 0.007 16.7 0.9 1.3 1 0 0 1 1 1 1 C1 domain Nudix_N_2 PF14803.6 gi|73667727|ref|YP_303742.1| - 0.0063 16.4 0.5 2.8 8.0 0.1 2.2 2 0 0 2 2 2 2 Nudix N-terminal DUF2757 PF10955.8 gi|73667727|ref|YP_303742.1| - 0.015 15.6 0.4 0.38 11.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2757) zf-FPG_IleRS PF06827.14 gi|73667727|ref|YP_303742.1| - 0.015 15.1 2.5 0.033 14.1 2.6 1.5 1 1 0 1 1 1 0 Zinc finger found in FPG and IleRS Zn_ribbon_SprT PF17283.2 gi|73667727|ref|YP_303742.1| - 0.016 15.1 1.5 0.027 14.4 1.5 1.4 1 1 0 1 1 1 0 SprT-like zinc ribbon domain C1_1 PF00130.22 gi|73667727|ref|YP_303742.1| - 0.022 14.6 0.6 0.031 14.2 0.6 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) TF_Zn_Ribbon PF08271.12 gi|73667727|ref|YP_303742.1| - 0.042 13.4 2.0 0.11 12.0 2.0 1.7 1 1 0 1 1 1 0 TFIIB zinc-binding zf-RRN7 PF11781.8 gi|73667727|ref|YP_303742.1| - 0.044 13.5 2.9 0.046 13.4 0.3 2.0 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 HypA PF01155.19 gi|73667727|ref|YP_303742.1| - 0.054 13.5 0.2 0.063 13.3 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 gi|73667727|ref|YP_303742.1| - 0.056 13.2 0.8 1.4 8.7 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|73667727|ref|YP_303742.1| - 0.062 12.6 0.8 0.14 11.5 0.8 1.5 1 0 0 1 1 1 0 Transcription factor zinc-finger zf-UDP PF14569.6 gi|73667727|ref|YP_303742.1| - 0.083 13.0 0.2 0.11 12.6 0.2 1.2 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-B_box PF00643.24 gi|73667727|ref|YP_303742.1| - 0.087 13.0 0.9 12 6.1 0.1 2.2 2 0 0 2 2 2 0 B-box zinc finger zinc_ribbon_10 PF10058.9 gi|73667727|ref|YP_303742.1| - 0.32 10.7 2.9 0.64 9.8 2.9 1.6 1 1 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein DBI_PRT PF02277.17 gi|73667728|ref|YP_303743.1| - 0.0022 17.3 0.5 0.0032 16.7 0.5 1.2 1 0 0 1 1 1 1 Phosphoribosyltransferase tRNA-synt_2b PF00587.25 gi|73667729|ref|YP_303744.1| - 9.8e-27 94.1 0.0 1.5e-26 93.4 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|73667729|ref|YP_303744.1| - 1.2e-21 76.7 0.1 2.5e-21 75.6 0.1 1.6 1 0 0 1 1 1 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|73667729|ref|YP_303744.1| - 1.6e-16 60.3 0.6 6.8e-16 58.2 0.3 2.1 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal TIR_2 PF13676.6 gi|73667729|ref|YP_303744.1| - 0.069 13.8 0.0 0.24 12.0 0.0 1.9 1 0 0 1 1 1 0 TIR domain zf-ZPR1 PF03367.13 gi|73667730|ref|YP_303745.1| - 1.4e-35 122.5 0.1 1.8e-35 122.2 0.1 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain DUF3943 PF13084.6 gi|73667730|ref|YP_303745.1| - 0.18 11.7 0.1 1 9.3 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3943) SepF PF04472.12 gi|73667731|ref|YP_303746.1| - 8.7e-13 48.4 1.9 8.7e-13 48.4 1.9 1.5 2 0 0 2 2 2 1 Cell division protein SepF Transposase_31 PF04754.12 gi|73667731|ref|YP_303746.1| - 0.015 14.9 0.0 0.018 14.7 0.0 1.2 1 0 0 1 1 1 0 Putative transposase, YhgA-like PUA PF01472.20 gi|73667732|ref|YP_303747.1| - 3.6e-20 71.7 1.7 5.1e-20 71.2 1.7 1.2 1 0 0 1 1 1 1 PUA domain Pre-PUA PF17832.1 gi|73667732|ref|YP_303747.1| - 3.5e-05 24.4 0.3 0.00013 22.5 0.3 1.9 1 1 0 1 1 1 1 Pre-PUA-like domain DUF1947 PF09183.10 gi|73667732|ref|YP_303747.1| - 0.00066 19.9 0.1 0.0013 19.0 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) UPF0113 PF03657.13 gi|73667732|ref|YP_303747.1| - 0.02 15.2 0.1 0.034 14.4 0.1 1.3 1 0 0 1 1 1 0 UPF0113 PUA domain KH_2 PF07650.17 gi|73667732|ref|YP_303747.1| - 0.067 13.0 2.3 0.16 11.8 0.4 2.4 3 0 0 3 3 3 0 KH domain DUF1104 PF06518.11 gi|73667732|ref|YP_303747.1| - 0.089 13.2 0.4 16 5.9 0.3 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1104) MFS_1 PF07690.16 gi|73667733|ref|YP_303748.1| - 3.4e-30 105.2 54.4 5.1e-20 71.7 18.5 2.0 1 1 0 2 2 2 2 Major Facilitator Superfamily ThiI PF02568.14 gi|73667734|ref|YP_303749.1| - 0.00021 21.0 0.0 0.00052 19.6 0.0 1.6 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) NAD_synthase PF02540.17 gi|73667734|ref|YP_303749.1| - 0.0063 15.7 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 NAD synthase QueC PF06508.13 gi|73667734|ref|YP_303749.1| - 0.066 12.7 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC H_PPase PF03030.16 gi|73667735|ref|YP_303750.1| - 4.1e-264 878.2 44.5 4.6e-264 878.0 44.5 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 gi|73667736|ref|YP_303751.1| - 5.3e-182 606.9 22.0 6.5e-182 606.6 22.0 1.1 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase Fer4_NifH PF00142.18 gi|73667737|ref|YP_303752.1| - 7.4e-41 140.4 0.3 7.9e-41 140.3 0.3 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_31 PF13614.6 gi|73667737|ref|YP_303752.1| - 3.7e-05 23.7 0.1 4.4e-05 23.5 0.1 1.1 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|73667737|ref|YP_303752.1| - 4.8e-05 23.4 0.0 4.9e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|73667737|ref|YP_303752.1| - 0.12 11.9 0.1 0.14 11.6 0.1 1.2 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Pterin_bind PF00809.22 gi|73667739|ref|YP_303754.1| - 3.5e-10 40.0 0.3 6.2e-09 35.9 0.3 2.2 1 1 0 1 1 1 1 Pterin binding enzyme DUF4346 PF14251.6 gi|73667739|ref|YP_303754.1| - 6.8e-10 39.0 0.0 2.8e-09 37.0 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4346) CdhD PF03599.16 gi|73667739|ref|YP_303754.1| - 3.6e-05 22.6 0.0 0.00011 21.0 0.0 1.7 2 0 0 2 2 2 1 CO dehydrogenase/acetyl-CoA synthase delta subunit Tubulin PF00091.25 gi|73667740|ref|YP_303755.1| - 1.3e-39 136.5 0.1 2.2e-39 135.7 0.1 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|73667740|ref|YP_303755.1| - 5.2e-35 119.6 1.2 2.1e-34 117.7 0.1 2.5 2 1 0 2 2 2 1 FtsZ family, C-terminal domain TrkA_N PF02254.18 gi|73667740|ref|YP_303755.1| - 0.041 14.2 0.7 0.88 9.9 0.1 3.2 4 1 0 4 4 4 0 TrkA-N domain ThiF PF00899.21 gi|73667740|ref|YP_303755.1| - 0.07 12.5 0.0 0.22 10.9 0.0 1.9 2 0 0 2 2 2 0 ThiF family Tubulin_2 PF13809.6 gi|73667740|ref|YP_303755.1| - 0.44 9.7 5.8 5.4 6.1 2.2 2.3 1 1 1 2 2 2 0 Tubulin like HAD_2 PF13419.6 gi|73667741|ref|YP_303756.1| - 2.7e-29 102.5 0.0 3.3e-29 102.2 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73667741|ref|YP_303756.1| - 9.8e-15 55.4 0.0 5.6e-14 52.9 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|73667741|ref|YP_303756.1| - 0.013 15.9 0.0 0.023 15.1 0.0 1.5 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase KH_7 PF17214.3 gi|73667742|ref|YP_303757.1| - 8.1e-29 99.4 1.2 1.7e-27 95.1 0.1 3.0 2 0 0 2 2 2 1 KH domain Beta-Casp PF10996.8 gi|73667742|ref|YP_303757.1| - 1.4e-24 86.5 0.0 3.9e-24 85.1 0.0 1.8 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 gi|73667742|ref|YP_303757.1| - 1.3e-15 57.0 0.0 3.4e-15 55.7 0.0 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|73667742|ref|YP_303757.1| - 1.1e-14 54.9 0.3 7.2e-13 49.0 0.4 3.0 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|73667742|ref|YP_303757.1| - 1.5e-13 50.6 0.0 2.6e-13 49.9 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|73667742|ref|YP_303757.1| - 1.4e-10 41.1 0.1 2.5e-10 40.2 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|73667742|ref|YP_303757.1| - 6.7e-06 25.8 0.6 5.8e-05 22.8 0.2 2.7 3 0 0 3 3 3 1 KH domain Lactamase_B_3 PF13483.6 gi|73667742|ref|YP_303757.1| - 5e-05 23.3 0.0 0.00013 21.9 0.0 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_1 PF00013.29 gi|73667742|ref|YP_303757.1| - 0.0068 16.2 1.5 0.068 13.0 0.2 2.6 2 0 0 2 2 2 1 KH domain KH_4 PF13083.6 gi|73667742|ref|YP_303757.1| - 0.013 15.3 0.0 0.033 14.0 0.0 1.7 1 0 0 1 1 1 0 KH domain DUF3489 PF11994.8 gi|73667742|ref|YP_303757.1| - 0.12 12.4 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) Proteasome PF00227.26 gi|73667743|ref|YP_303758.1| - 2.2e-56 190.4 1.7 2.4e-56 190.2 1.7 1.0 1 0 0 1 1 1 1 Proteasome subunit DUF4191 PF13829.6 gi|73667743|ref|YP_303758.1| - 0.031 13.6 0.1 0.045 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) HD PF01966.22 gi|73667744|ref|YP_303759.1| - 1.2e-16 61.1 1.3 1.7e-16 60.5 1.3 1.3 1 0 0 1 1 1 1 HD domain HD_2 PF12917.7 gi|73667744|ref|YP_303759.1| - 0.0013 18.5 1.3 0.0026 17.5 0.4 1.9 1 1 1 2 2 2 1 HD containing hydrolase-like enzyme HDOD PF08668.12 gi|73667744|ref|YP_303759.1| - 0.0074 15.8 0.1 0.012 15.1 0.1 1.4 1 0 0 1 1 1 1 HDOD domain Arena_nucleocap PF00843.17 gi|73667744|ref|YP_303759.1| - 0.18 10.7 0.1 0.24 10.3 0.1 1.2 1 0 0 1 1 1 0 Arenavirus nucleocapsid N-terminal domain TFIIE_alpha PF02002.17 gi|73667745|ref|YP_303760.1| - 4.6e-17 61.8 1.5 7.7e-17 61.1 1.3 1.4 2 0 0 2 2 2 1 TFIIE alpha subunit Mab-21 PF03281.14 gi|73667745|ref|YP_303760.1| - 0.00082 18.7 0.2 0.001 18.5 0.2 1.1 1 0 0 1 1 1 1 Mab-21 protein TF_Zn_Ribbon PF08271.12 gi|73667745|ref|YP_303760.1| - 0.011 15.3 1.4 0.027 14.0 1.4 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding DUF1610 PF07754.11 gi|73667745|ref|YP_303760.1| - 0.048 13.6 2.0 0.079 12.9 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) RepL PF05732.11 gi|73667745|ref|YP_303760.1| - 0.051 13.0 0.0 0.086 12.3 0.0 1.3 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) ATP-grasp_3 PF02655.14 gi|73667746|ref|YP_303761.1| - 2.4e-46 157.7 0.0 3.3e-46 157.3 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|73667746|ref|YP_303761.1| - 7.2e-10 38.7 0.0 3.7e-09 36.4 0.0 2.0 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.17 gi|73667746|ref|YP_303761.1| - 1.8e-08 34.1 0.0 2.5e-07 30.4 0.0 2.1 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain RimK PF08443.11 gi|73667746|ref|YP_303761.1| - 5.9e-07 29.3 0.0 9.1e-06 25.4 0.0 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|73667746|ref|YP_303761.1| - 0.00021 20.9 0.0 0.0012 18.4 0.0 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_ST PF14397.6 gi|73667746|ref|YP_303761.1| - 0.027 13.7 0.0 0.072 12.3 0.0 1.7 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp ATP-grasp_4 PF13535.6 gi|73667746|ref|YP_303761.1| - 0.16 11.6 0.0 0.71 9.5 0.0 2.0 1 1 1 2 2 2 0 ATP-grasp domain GARS_A PF01071.19 gi|73667746|ref|YP_303761.1| - 0.17 11.6 0.0 8.2 6.1 0.0 2.2 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NMD3 PF04981.13 gi|73667747|ref|YP_303762.1| - 1.2e-55 188.6 0.1 1.5e-55 188.4 0.1 1.1 1 0 0 1 1 1 1 NMD3 family Ribosomal_L37e PF01907.19 gi|73667747|ref|YP_303762.1| - 0.0041 17.3 1.2 0.0041 17.3 1.2 2.5 3 0 0 3 3 3 1 Ribosomal protein L37e Prok-RING_1 PF14446.6 gi|73667747|ref|YP_303762.1| - 0.22 11.5 0.1 0.22 11.5 0.1 2.9 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zinc_ribbon_2 PF13240.6 gi|73667747|ref|YP_303762.1| - 0.38 10.6 4.5 18 5.2 1.4 3.1 3 0 0 3 3 3 0 zinc-ribbon domain CdhD PF03599.16 gi|73667748|ref|YP_303763.1| - 7.1e-157 522.0 0.2 8.4e-157 521.8 0.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.13 gi|73667748|ref|YP_303763.1| - 1.8e-13 49.9 2.4 4.5e-13 48.6 2.4 1.7 1 0 0 1 1 1 1 Putative Fe-S cluster MOFRL PF05161.13 gi|73667748|ref|YP_303763.1| - 0.063 13.5 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 MOFRL family CdhD PF03599.16 gi|73667749|ref|YP_303764.1| - 3.3e-92 309.2 2.1 2.2e-84 283.4 0.2 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit CbiA PF01656.23 gi|73667750|ref|YP_303765.1| - 5.1e-17 62.1 0.0 1.1e-16 61.0 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|73667750|ref|YP_303765.1| - 8.1e-14 51.9 0.1 1.6e-13 51.0 0.1 1.5 1 1 0 1 1 1 1 AAA domain ParA PF10609.9 gi|73667750|ref|YP_303765.1| - 1.9e-10 40.6 1.7 0.00028 20.4 0.1 2.5 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|73667750|ref|YP_303765.1| - 3.3e-09 36.6 3.5 1.1e-08 34.9 3.5 1.7 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|73667750|ref|YP_303765.1| - 2.6e-06 26.8 2.5 1e-05 24.9 0.6 2.3 1 1 1 2 2 2 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|73667750|ref|YP_303765.1| - 1.6e-05 24.5 0.1 0.00056 19.5 0.1 2.4 2 1 0 2 2 2 1 Cellulose biosynthesis protein BcsQ NTPase_1 PF03266.15 gi|73667750|ref|YP_303765.1| - 0.00018 21.5 1.2 0.36 10.7 0.0 2.2 2 0 0 2 2 2 2 NTPase AAA_26 PF13500.6 gi|73667750|ref|YP_303765.1| - 0.00082 19.2 2.0 0.23 11.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|73667750|ref|YP_303765.1| - 0.00088 19.7 0.1 0.001 19.5 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain Toprim PF01751.22 gi|73667750|ref|YP_303765.1| - 0.0014 18.8 0.7 0.012 15.9 0.1 2.2 1 1 0 2 2 2 1 Toprim domain MipZ PF09140.11 gi|73667750|ref|YP_303765.1| - 0.002 17.5 0.4 0.06 12.6 0.0 2.4 2 1 0 2 2 2 1 ATPase MipZ AAA_24 PF13479.6 gi|73667750|ref|YP_303765.1| - 0.0024 17.6 0.6 0.029 14.1 0.5 2.2 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|73667750|ref|YP_303765.1| - 0.0046 16.7 0.4 0.0099 15.6 0.4 1.8 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 gi|73667750|ref|YP_303765.1| - 0.007 16.1 0.1 0.048 13.4 0.0 2.0 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 gi|73667750|ref|YP_303765.1| - 0.0074 16.2 0.6 0.018 14.9 0.1 1.8 2 0 0 2 2 2 1 Adenylylsulphate kinase ResIII PF04851.15 gi|73667750|ref|YP_303765.1| - 0.0099 15.9 0.0 0.015 15.3 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|73667750|ref|YP_303765.1| - 0.015 15.5 0.2 0.031 14.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|73667750|ref|YP_303765.1| - 0.022 14.9 3.5 0.059 13.5 3.4 2.1 1 1 0 1 1 1 0 Helicase HerA, central domain DUF2075 PF09848.9 gi|73667750|ref|YP_303765.1| - 0.038 13.2 0.0 0.055 12.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ABC_tran PF00005.27 gi|73667750|ref|YP_303765.1| - 0.049 14.2 0.2 0.068 13.7 0.1 1.6 1 1 0 1 1 1 0 ABC transporter AAA_18 PF13238.6 gi|73667750|ref|YP_303765.1| - 0.055 14.0 0.5 0.1 13.2 0.3 1.8 1 1 1 2 2 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|73667750|ref|YP_303765.1| - 0.056 12.4 0.7 0.1 11.5 0.4 1.6 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain SRP54 PF00448.22 gi|73667750|ref|YP_303765.1| - 0.058 13.0 1.9 0.32 10.6 0.2 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Helicase_RecD PF05127.14 gi|73667750|ref|YP_303765.1| - 0.064 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Helicase Toprim_4 PF13662.6 gi|73667750|ref|YP_303765.1| - 0.073 13.6 0.1 0.2 12.1 0.0 1.8 2 0 0 2 2 1 0 Toprim domain Zeta_toxin PF06414.12 gi|73667750|ref|YP_303765.1| - 0.099 11.9 0.1 0.16 11.2 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin Sigma54_activat PF00158.26 gi|73667750|ref|YP_303765.1| - 0.1 12.3 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|73667750|ref|YP_303765.1| - 0.18 12.2 0.0 1 9.8 0.0 2.2 3 0 0 3 3 2 0 RNA helicase NACHT PF05729.12 gi|73667750|ref|YP_303765.1| - 0.2 11.6 0.2 0.33 10.9 0.2 1.5 1 1 0 1 1 1 0 NACHT domain MeaB PF03308.16 gi|73667750|ref|YP_303765.1| - 0.24 10.3 2.2 0.64 8.9 0.1 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_19 PF13245.6 gi|73667750|ref|YP_303765.1| - 0.26 11.6 3.2 0.6 10.4 1.1 2.3 1 1 1 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|73667750|ref|YP_303765.1| - 0.28 10.7 3.8 0.36 10.4 0.3 2.3 3 0 0 3 3 2 0 AAA domain CdhC PF03598.15 gi|73667751|ref|YP_303766.1| - 1.5e-61 206.9 0.2 2.2e-61 206.3 0.2 1.3 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit Nro1 PF12753.7 gi|73667751|ref|YP_303766.1| - 0.085 11.8 3.9 0.39 9.6 0.0 2.1 2 0 0 2 2 2 0 Nuclear pore complex subunit Nro1 E7 PF00527.18 gi|73667751|ref|YP_303766.1| - 2.9 8.1 5.1 1.8 8.8 0.9 2.2 2 0 0 2 2 2 0 E7 protein, Early protein CO_dh PF02552.16 gi|73667752|ref|YP_303767.1| - 2.1e-32 112.2 0.0 2.6e-32 111.9 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.22 gi|73667752|ref|YP_303767.1| - 5.8e-08 32.6 0.0 8.7e-08 32.0 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Prismane PF03063.20 gi|73667753|ref|YP_303768.1| - 2.6e-108 362.9 2.4 7e-90 302.1 0.0 2.1 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_7 PF12838.7 gi|73667753|ref|YP_303768.1| - 4.8e-06 27.1 7.9 4.8e-06 27.1 7.9 2.6 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73667753|ref|YP_303768.1| - 8.2e-06 25.9 10.9 8.2e-06 25.9 10.9 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73667753|ref|YP_303768.1| - 9.2e-06 25.7 7.8 9.2e-06 25.7 7.8 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73667753|ref|YP_303768.1| - 0.0049 17.1 4.5 0.28 11.4 0.2 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73667753|ref|YP_303768.1| - 0.0071 16.1 1.8 0.0071 16.1 1.8 3.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73667753|ref|YP_303768.1| - 0.0077 16.7 11.0 0.0077 16.7 11.0 2.6 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73667753|ref|YP_303768.1| - 0.025 15.1 0.9 0.025 15.1 0.9 3.7 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73667753|ref|YP_303768.1| - 0.082 13.5 0.6 0.043 14.4 1.5 3.8 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73667753|ref|YP_303768.1| - 0.086 12.9 26.7 0.025 14.7 4.7 3.4 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73667753|ref|YP_303768.1| - 0.094 12.8 23.7 0.11 12.7 1.4 4.1 3 0 0 3 3 3 0 4Fe-4S binding domain CODH_A_N PF18537.1 gi|73667753|ref|YP_303768.1| - 0.11 12.5 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Fer4_22 PF17179.4 gi|73667753|ref|YP_303768.1| - 0.2 12.5 11.2 0.13 13.1 0.6 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73667753|ref|YP_303768.1| - 0.6 10.3 24.9 0.032 14.3 14.3 3.4 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73667753|ref|YP_303768.1| - 2 9.0 11.5 6.1 7.5 2.3 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Rhomboid PF01694.22 gi|73667754|ref|YP_303769.1| - 3.1e-35 121.4 10.8 5.1e-35 120.7 10.8 1.3 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 gi|73667754|ref|YP_303769.1| - 1.8e-07 31.7 4.4 2.1e-07 31.4 0.5 2.3 2 0 0 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) NYN PF01936.18 gi|73667756|ref|YP_303771.1| - 1.3e-23 84.2 0.0 1.8e-23 83.7 0.0 1.1 1 0 0 1 1 1 1 NYN domain DUF460 PF04312.13 gi|73667756|ref|YP_303771.1| - 0.092 12.5 0.0 2.8 7.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF460) DUF2103 PF09876.9 gi|73667758|ref|YP_303773.1| - 1.5e-36 124.3 1.1 1.8e-36 124.1 1.1 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2103) Semialdhyde_dh PF01118.24 gi|73667758|ref|YP_303773.1| - 0.076 13.5 0.1 0.1 13.1 0.1 1.4 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain ACT PF01842.25 gi|73667759|ref|YP_303774.1| - 2.2e-17 62.5 0.5 4.2e-08 32.8 0.1 2.3 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 gi|73667759|ref|YP_303774.1| - 4.9e-07 30.3 1.0 0.0049 17.4 0.1 2.3 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 gi|73667759|ref|YP_303774.1| - 5.4e-06 26.1 0.2 0.023 14.5 0.1 2.5 2 1 0 2 2 2 2 ACT domain PfUIS3 PF11567.8 gi|73667759|ref|YP_303774.1| - 0.064 13.6 0.0 0.097 13.0 0.0 1.3 1 0 0 1 1 1 0 Plasmodium falciparum UIS3 membrane protein AMP-binding_C_2 PF14535.6 gi|73667760|ref|YP_303775.1| - 8.2e-33 112.6 0.1 2.2e-32 111.2 0.1 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|73667760|ref|YP_303775.1| - 6.7e-18 64.5 0.0 2.4e-17 62.7 0.0 1.8 2 0 0 2 2 2 1 AMP-binding enzyme GH3 PF03321.13 gi|73667760|ref|YP_303775.1| - 0.07 12.0 0.0 0.13 11.1 0.0 1.5 2 0 0 2 2 2 0 GH3 auxin-responsive promoter DHHA1 PF02272.19 gi|73667761|ref|YP_303776.1| - 4.4e-12 46.6 1.4 8.2e-12 45.7 1.4 1.5 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.20 gi|73667761|ref|YP_303776.1| - 6.4e-12 45.6 0.1 1.3e-11 44.6 0.1 1.5 1 0 0 1 1 1 1 DHH family DUF637 PF04830.13 gi|73667761|ref|YP_303776.1| - 0.022 14.6 1.3 0.037 13.8 0.3 1.8 1 1 1 2 2 2 0 Possible hemagglutinin (DUF637) Prefoldin_2 PF01920.20 gi|73667762|ref|YP_303777.1| - 2e-25 88.8 15.2 2.2e-25 88.7 15.2 1.0 1 0 0 1 1 1 1 Prefoldin subunit Colicin_E5 PF12106.8 gi|73667762|ref|YP_303777.1| - 0.0083 16.4 0.1 0.013 15.8 0.1 1.2 1 0 0 1 1 1 1 Colicin E5 ribonuclease domain Snf7 PF03357.21 gi|73667762|ref|YP_303777.1| - 0.0086 15.7 13.7 0.12 11.9 4.1 2.1 2 0 0 2 2 2 2 Snf7 UPF0147 PF03685.13 gi|73667762|ref|YP_303777.1| - 0.047 13.8 0.8 0.19 11.8 0.1 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0147) IMS PF00817.20 gi|73667762|ref|YP_303777.1| - 0.05 13.6 0.7 0.064 13.2 0.7 1.1 1 0 0 1 1 1 0 impB/mucB/samB family PI_PP_I PF18363.1 gi|73667762|ref|YP_303777.1| - 0.072 13.3 1.3 0.69 10.1 0.1 2.1 2 0 0 2 2 2 0 Phosphoinositide phosphatase insertion domain GvpK PF05121.12 gi|73667762|ref|YP_303777.1| - 0.089 12.8 4.4 3.4 7.8 0.4 2.2 2 0 0 2 2 2 0 Gas vesicle protein K DOCK_N PF16172.5 gi|73667762|ref|YP_303777.1| - 0.16 10.8 5.5 0.18 10.7 5.5 1.0 1 0 0 1 1 1 0 DOCK N-terminus FlxA PF14282.6 gi|73667762|ref|YP_303777.1| - 0.18 11.8 24.7 0.28 11.2 11.1 2.3 2 0 0 2 2 2 0 FlxA-like protein YojJ PF10372.9 gi|73667762|ref|YP_303777.1| - 0.19 11.8 4.8 0.33 11.1 0.6 2.2 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus GAS PF13851.6 gi|73667762|ref|YP_303777.1| - 0.25 10.7 15.9 7.5 5.8 15.9 2.0 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding LPP PF04728.13 gi|73667762|ref|YP_303777.1| - 0.28 11.6 9.3 6.8 7.2 0.1 2.5 2 0 0 2 2 2 0 Lipoprotein leucine-zipper V_ATPase_I PF01496.19 gi|73667762|ref|YP_303777.1| - 0.48 8.3 5.9 0.61 7.9 5.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Prefoldin PF02996.17 gi|73667762|ref|YP_303777.1| - 0.85 9.5 14.8 36 4.3 14.8 2.2 1 1 0 1 1 1 0 Prefoldin subunit DHR10 PF18595.1 gi|73667762|ref|YP_303777.1| - 1 9.4 17.6 3.2 7.8 3.1 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF3552 PF12072.8 gi|73667762|ref|YP_303777.1| - 1.6 8.1 18.6 0.25 10.7 6.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) Nup54 PF13874.6 gi|73667762|ref|YP_303777.1| - 2.2 8.4 14.5 26 4.9 14.5 2.1 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 DUF3450 PF11932.8 gi|73667762|ref|YP_303777.1| - 2.2 7.5 20.0 1.5 8.1 4.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Com_YlbF PF06133.11 gi|73667762|ref|YP_303777.1| - 3.2 8.4 18.4 1.4 9.6 11.6 2.3 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA APG6_N PF17675.1 gi|73667762|ref|YP_303777.1| - 3.6 8.1 19.6 84 3.7 19.5 2.0 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF3847 PF12958.7 gi|73667762|ref|YP_303777.1| - 3.8 7.7 12.5 2.6 8.2 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3847) UPF0242 PF06785.11 gi|73667762|ref|YP_303777.1| - 5.9 6.9 16.9 20 5.2 16.9 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HemX PF04375.14 gi|73667762|ref|YP_303777.1| - 6.5 5.9 19.5 41 3.3 19.5 1.8 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Spc24 PF08286.11 gi|73667762|ref|YP_303777.1| - 6.9 7.0 13.4 8.5 6.7 4.4 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Peptidase_M42 PF05343.14 gi|73667763|ref|YP_303778.1| - 1.7e-115 385.1 0.2 1.9e-115 384.9 0.2 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|73667763|ref|YP_303778.1| - 6.7e-09 35.7 0.0 1.2e-08 35.0 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|73667763|ref|YP_303778.1| - 8.7e-05 22.3 0.0 0.0052 16.5 0.0 2.5 2 1 0 2 2 2 1 Peptidase family M28 Sec61_beta PF03911.16 gi|73667764|ref|YP_303779.1| - 0.17 12.0 0.3 0.17 12.0 0.3 4.6 5 0 0 5 5 5 0 Sec61beta family DUF5625 PF18539.1 gi|73667765|ref|YP_303780.1| - 0.047 14.0 0.0 0.072 13.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5625) FA_desaturase PF00487.24 gi|73667765|ref|YP_303780.1| - 2.2 8.0 8.2 3.2 7.5 8.2 1.3 1 0 0 1 1 1 0 Fatty acid desaturase HMGL-like PF00682.19 gi|73667766|ref|YP_303781.1| - 9.5e-75 251.5 0.4 9.5e-75 251.5 0.4 1.6 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 gi|73667766|ref|YP_303781.1| - 3.4e-37 127.3 1.6 6.6e-37 126.4 1.6 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain TPP_enzyme_N PF02776.18 gi|73667767|ref|YP_303782.1| - 6.6e-60 201.6 0.1 6.4e-59 198.4 0.0 2.4 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|73667767|ref|YP_303782.1| - 9.9e-57 191.0 0.1 7.1e-56 188.2 0.1 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|73667767|ref|YP_303782.1| - 1.8e-51 173.5 0.2 3.7e-51 172.5 0.2 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 gi|73667767|ref|YP_303782.1| - 0.049 13.4 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ALS_ss_C PF10369.9 gi|73667768|ref|YP_303783.1| - 9.8e-31 105.8 2.6 9.8e-31 105.8 2.6 2.1 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|73667768|ref|YP_303783.1| - 8.1e-19 67.2 1.6 4.1e-18 65.0 0.2 2.3 2 1 0 2 2 2 1 ACT domain ACT PF01842.25 gi|73667768|ref|YP_303783.1| - 1.3e-17 63.3 0.9 1.1e-16 60.3 0.1 2.3 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|73667768|ref|YP_303783.1| - 3.8e-07 30.6 0.7 3.8e-07 30.6 0.7 1.8 2 1 0 2 2 2 1 ACT domain DUF211 PF02680.14 gi|73667768|ref|YP_303783.1| - 0.031 14.4 5.3 1.7 8.9 0.8 2.2 1 1 1 2 2 2 0 Uncharacterized ArCR, COG1888 SLS PF14611.6 gi|73667768|ref|YP_303783.1| - 0.048 13.5 1.2 6.4 6.5 0.1 2.1 1 1 1 2 2 2 0 Mitochondrial inner-membrane-bound regulator NIL PF09383.10 gi|73667768|ref|YP_303783.1| - 0.05 13.4 0.2 9.5 6.2 0.0 2.5 2 1 1 3 3 3 0 NIL domain Saccharop_dh_N PF04455.12 gi|73667768|ref|YP_303783.1| - 0.066 13.6 0.3 0.21 12.0 0.1 1.9 1 1 0 2 2 2 0 LOR/SDH bifunctional enzyme conserved region RL10P_insert PF17777.1 gi|73667768|ref|YP_303783.1| - 0.071 13.1 0.2 0.15 12.1 0.2 1.5 1 0 0 1 1 1 0 Insertion domain in 60S ribosomal protein L10P YbbR PF07949.12 gi|73667768|ref|YP_303783.1| - 0.18 12.1 5.1 5.3 7.5 0.1 2.4 2 0 0 2 2 2 0 YbbR-like protein IlvN PF07991.12 gi|73667769|ref|YP_303784.1| - 8.2e-80 266.2 1.1 1.2e-79 265.6 1.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|73667769|ref|YP_303784.1| - 2e-61 206.5 0.5 3e-61 205.9 0.5 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 gi|73667769|ref|YP_303784.1| - 1.1e-08 34.6 0.0 2e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|73667769|ref|YP_303784.1| - 1.5e-08 35.1 0.1 3.9e-08 33.8 0.1 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|73667769|ref|YP_303784.1| - 7.6e-08 32.7 0.1 1.6e-07 31.6 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 gi|73667769|ref|YP_303784.1| - 0.00063 19.8 0.0 0.0016 18.6 0.0 1.6 1 1 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CoA_binding PF02629.19 gi|73667769|ref|YP_303784.1| - 0.015 15.9 0.0 0.048 14.3 0.0 1.8 1 0 0 1 1 1 0 CoA binding domain ApbA PF02558.16 gi|73667769|ref|YP_303784.1| - 0.02 14.6 0.0 0.049 13.3 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Mur_ligase PF01225.25 gi|73667769|ref|YP_303784.1| - 0.037 14.4 0.3 0.12 12.8 0.1 2.0 2 1 0 2 2 2 0 Mur ligase family, catalytic domain Oxidored_nitro PF00148.19 gi|73667769|ref|YP_303784.1| - 0.039 12.7 0.1 0.073 11.8 0.1 1.8 1 1 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Shikimate_DH PF01488.20 gi|73667769|ref|YP_303784.1| - 0.083 13.0 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ELFV_dehydrog PF00208.21 gi|73667769|ref|YP_303784.1| - 0.091 12.5 0.0 0.21 11.3 0.0 1.6 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TrkA_N PF02254.18 gi|73667769|ref|YP_303784.1| - 0.13 12.5 0.1 0.51 10.6 0.1 2.0 1 1 0 1 1 1 0 TrkA-N domain Nitroreductase PF00881.24 gi|73667770|ref|YP_303785.1| - 3.4e-32 111.8 0.3 4.8e-19 69.1 0.0 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|73667770|ref|YP_303785.1| - 6.8e-16 58.5 0.1 4.7e-05 23.1 0.0 3.0 2 1 1 3 3 3 3 Putative TM nitroreductase ParE_toxin PF05016.15 gi|73667772|ref|YP_303787.1| - 1.2e-09 38.6 0.1 1.3e-09 38.5 0.1 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE Gp49 PF05973.14 gi|73667772|ref|YP_303787.1| - 3.5e-05 23.9 0.0 4.6e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Phage derived protein Gp49-like (DUF891) Gemini_AL1_M PF08283.11 gi|73667773|ref|YP_303788.1| - 0.004 17.2 0.1 0.0051 16.9 0.1 1.3 1 0 0 1 1 1 1 Geminivirus rep protein central domain Peptidase_S49_N PF08496.10 gi|73667773|ref|YP_303788.1| - 0.061 13.4 0.5 0.08 13.0 0.5 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Mrr_cat PF04471.12 gi|73667774|ref|YP_303789.1| - 1.7e-08 34.5 0.1 3e-08 33.7 0.1 1.3 1 0 0 1 1 1 1 Restriction endonuclease DUF234 PF03008.14 gi|73667774|ref|YP_303789.1| - 0.14 12.7 2.9 0.25 11.8 2.9 1.5 1 0 0 1 1 1 0 Archaea bacterial proteins of unknown function Mrr_cat PF04471.12 gi|73667775|ref|YP_303790.1| - 1.3e-08 34.8 0.1 2e-08 34.2 0.1 1.3 1 0 0 1 1 1 1 Restriction endonuclease DNA_topoisoIV PF00521.20 gi|73667775|ref|YP_303790.1| - 0.11 11.3 0.7 0.69 8.7 0.0 1.9 2 0 0 2 2 2 0 DNA gyrase/topoisomerase IV, subunit A Fer4_20 PF14691.6 gi|73667776|ref|YP_303791.1| - 3.6e-44 149.2 4.5 6e-44 148.4 4.5 1.4 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.14 gi|73667776|ref|YP_303791.1| - 7.4e-37 127.2 1.4 1e-36 126.7 1.4 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|73667776|ref|YP_303791.1| - 1.4e-17 64.0 3.5 2.7e-08 34.3 0.2 3.5 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|73667776|ref|YP_303791.1| - 9.4e-12 44.8 1.3 2.4e-06 27.0 0.2 3.5 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|73667776|ref|YP_303791.1| - 6.5e-09 35.9 0.0 1.9e-08 34.4 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 gi|73667776|ref|YP_303791.1| - 2.2e-08 34.5 0.7 0.0031 17.9 0.2 2.7 2 1 0 2 2 2 2 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|73667776|ref|YP_303791.1| - 2.3e-07 30.3 5.6 0.00053 19.3 0.0 2.7 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 gi|73667776|ref|YP_303791.1| - 9.5e-07 28.5 1.7 5.6e-05 22.7 0.0 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|73667776|ref|YP_303791.1| - 8.9e-06 25.1 0.4 2.2e-05 23.8 0.0 1.7 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 gi|73667776|ref|YP_303791.1| - 1.1e-05 24.8 1.4 1.1e-05 24.8 1.4 2.6 3 0 0 3 3 3 1 FAD binding domain HI0933_like PF03486.14 gi|73667776|ref|YP_303791.1| - 1.9e-05 23.5 0.5 1.9e-05 23.5 0.5 1.8 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 gi|73667776|ref|YP_303791.1| - 0.00034 19.8 4.7 0.00058 19.1 0.1 2.8 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|73667776|ref|YP_303791.1| - 0.00037 19.8 1.0 0.00059 19.2 0.1 1.7 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.24 gi|73667776|ref|YP_303791.1| - 0.0013 18.3 5.2 0.0014 18.3 0.4 2.5 1 1 0 2 2 2 1 FAD dependent oxidoreductase Shikimate_DH PF01488.20 gi|73667776|ref|YP_303791.1| - 0.0021 18.2 0.0 14 5.7 0.1 3.5 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase FMO-like PF00743.19 gi|73667776|ref|YP_303791.1| - 0.0027 16.2 0.0 1.2 7.4 0.0 2.3 3 0 0 3 3 3 2 Flavin-binding monooxygenase-like 2-Hacid_dh_C PF02826.19 gi|73667776|ref|YP_303791.1| - 0.0034 16.8 0.0 0.28 10.5 0.0 2.4 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amino_oxidase PF01593.24 gi|73667776|ref|YP_303791.1| - 0.0044 16.4 0.1 0.0044 16.4 0.1 1.5 2 0 0 2 2 1 1 Flavin containing amine oxidoreductase F420_oxidored PF03807.17 gi|73667776|ref|YP_303791.1| - 0.0045 17.5 1.4 0.85 10.2 0.2 3.2 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent ELFV_dehydrog PF00208.21 gi|73667776|ref|YP_303791.1| - 0.0069 16.1 0.1 3 7.5 0.0 2.2 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K_oxygenase PF13434.6 gi|73667776|ref|YP_303791.1| - 0.015 14.5 0.2 8.5 5.4 0.0 3.0 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) UDPG_MGDP_dh_N PF03721.14 gi|73667776|ref|YP_303791.1| - 0.04 13.5 0.0 0.12 11.9 0.0 1.8 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_9 PF13454.6 gi|73667776|ref|YP_303791.1| - 0.042 13.8 0.1 0.12 12.4 0.1 1.8 1 0 0 1 1 1 0 FAD-NAD(P)-binding 3HCDH_N PF02737.18 gi|73667776|ref|YP_303791.1| - 0.06 13.2 0.1 0.45 10.4 0.0 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Fer4_7 PF12838.7 gi|73667776|ref|YP_303791.1| - 0.063 13.9 0.8 0.063 13.9 0.8 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain Lycopene_cycl PF05834.12 gi|73667776|ref|YP_303791.1| - 0.074 12.1 1.2 0.15 11.1 0.2 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein Fer4_18 PF13746.6 gi|73667776|ref|YP_303791.1| - 0.08 13.1 2.1 0.1 12.8 0.8 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain TrkA_N PF02254.18 gi|73667776|ref|YP_303791.1| - 0.095 13.0 0.3 6.8 7.0 0.0 2.8 2 0 0 2 2 2 0 TrkA-N domain Trp_halogenase PF04820.14 gi|73667776|ref|YP_303791.1| - 0.23 10.3 3.1 0.085 11.7 0.3 1.6 2 0 0 2 2 2 0 Tryptophan halogenase AdoHcyase_NAD PF00670.21 gi|73667776|ref|YP_303791.1| - 3.6 7.6 5.3 14 5.7 0.1 3.0 3 0 0 3 3 3 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DHODB_Fe-S_bind PF10418.9 gi|73667777|ref|YP_303792.1| - 2.6e-13 49.5 3.1 4.9e-13 48.6 3.1 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|73667777|ref|YP_303792.1| - 5.3e-07 30.3 0.0 1.2e-06 29.1 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Fer2_3 PF13085.6 gi|73667777|ref|YP_303792.1| - 0.1 12.6 0.2 0.19 11.7 0.2 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain NAD_binding_6 PF08030.12 gi|73667777|ref|YP_303792.1| - 0.11 12.6 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Pept_tRNA_hydro PF01195.19 gi|73667777|ref|YP_303792.1| - 0.17 11.8 0.1 0.3 11.0 0.1 1.3 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase MannoseP_isomer PF01050.18 gi|73667778|ref|YP_303793.1| - 2.9e-55 186.3 0.1 4.5e-55 185.7 0.1 1.3 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase NTP_transferase PF00483.23 gi|73667778|ref|YP_303793.1| - 3.1e-54 184.2 0.0 5.4e-54 183.4 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase Cupin_2 PF07883.11 gi|73667778|ref|YP_303793.1| - 1.1e-09 37.8 0.1 1.9e-09 37.1 0.1 1.4 1 0 0 1 1 1 1 Cupin domain NTP_transf_3 PF12804.7 gi|73667778|ref|YP_303793.1| - 5.6e-06 26.8 0.0 9.5e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|73667778|ref|YP_303793.1| - 0.01 15.6 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AraC_binding PF02311.19 gi|73667778|ref|YP_303793.1| - 0.039 13.9 0.0 0.07 13.0 0.0 1.4 1 0 0 1 1 1 0 AraC-like ligand binding domain Glyco_transf_8 PF01501.20 gi|73667778|ref|YP_303793.1| - 0.095 12.2 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 8 dTDP_sugar_isom PF00908.17 gi|73667779|ref|YP_303794.1| - 6.7e-70 234.1 0.0 7.5e-70 234.0 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase GDP_Man_Dehyd PF16363.5 gi|73667780|ref|YP_303795.1| - 2.8e-83 280.1 0.0 3.2e-83 279.9 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|73667780|ref|YP_303795.1| - 2.4e-65 220.4 0.0 3.2e-65 219.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|73667780|ref|YP_303795.1| - 6.3e-26 91.0 0.1 8.1e-26 90.7 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|73667780|ref|YP_303795.1| - 5.2e-25 88.2 0.0 3.2e-24 85.6 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|73667780|ref|YP_303795.1| - 6.5e-17 61.5 0.2 3.1e-15 56.0 0.1 2.6 2 1 0 2 2 2 1 Male sterility protein RmlD_sub_bind PF04321.17 gi|73667780|ref|YP_303795.1| - 1.9e-16 60.1 0.0 2.7e-16 59.5 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|73667780|ref|YP_303795.1| - 4.2e-09 36.6 0.0 5.8e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|73667780|ref|YP_303795.1| - 0.00029 20.5 0.0 0.00045 19.9 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|73667780|ref|YP_303795.1| - 0.0019 17.7 0.0 0.013 15.0 0.0 2.0 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|73667780|ref|YP_303795.1| - 0.035 14.0 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 KR domain FtsJ PF01728.19 gi|73667780|ref|YP_303795.1| - 0.1 12.7 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 FtsJ-like methyltransferase RmlD_sub_bind PF04321.17 gi|73667781|ref|YP_303796.1| - 1.6e-88 296.5 0.0 2.1e-88 296.1 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|73667781|ref|YP_303796.1| - 3.5e-16 59.4 0.0 5.5e-16 58.8 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|73667781|ref|YP_303796.1| - 1.3e-12 47.8 0.0 2e-12 47.2 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|73667781|ref|YP_303796.1| - 2.2e-10 40.1 0.0 1.1e-08 34.6 0.0 2.8 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|73667781|ref|YP_303796.1| - 2.7e-07 29.9 0.2 7.8e-07 28.4 0.0 1.8 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|73667781|ref|YP_303796.1| - 4.1e-05 22.9 0.0 6.5e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 Male sterility protein NTP_transferase PF00483.23 gi|73667782|ref|YP_303797.1| - 6.5e-54 183.1 0.0 7.3e-54 183.0 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|73667782|ref|YP_303797.1| - 5.3e-13 49.6 0.0 5.8e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|73667782|ref|YP_303797.1| - 0.018 15.0 0.0 0.036 14.0 0.0 1.4 1 0 0 1 1 1 0 Cytidylyltransferase Polysacc_synt PF01943.17 gi|73667783|ref|YP_303798.1| - 1.4e-33 116.4 39.7 1.4e-33 116.4 39.7 3.0 2 1 1 3 3 3 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|73667783|ref|YP_303798.1| - 5.4e-21 75.2 24.3 5.4e-21 75.2 24.3 3.9 3 1 0 3 3 3 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.6 gi|73667783|ref|YP_303798.1| - 2.1e-13 50.2 28.7 2.1e-13 50.2 28.7 2.4 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein MatE PF01554.18 gi|73667783|ref|YP_303798.1| - 7.4e-12 45.2 13.3 7.4e-12 45.2 13.3 4.1 3 2 1 4 4 4 2 MatE MurJ PF03023.14 gi|73667783|ref|YP_303798.1| - 1.9e-10 40.0 50.6 2.8e-10 39.4 50.6 1.3 1 0 0 1 1 1 1 Lipid II flippase MurJ Glycos_transf_2 PF00535.26 gi|73667784|ref|YP_303799.1| - 3.8e-25 88.7 0.1 5.9e-25 88.0 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73667784|ref|YP_303799.1| - 1.4e-16 61.1 0.0 2e-16 60.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|73667784|ref|YP_303799.1| - 4e-10 39.9 0.0 6.2e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.9 gi|73667784|ref|YP_303799.1| - 7.3e-08 32.2 0.1 1e-07 31.7 0.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|73667784|ref|YP_303799.1| - 0.0014 19.1 0.0 0.0025 18.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glycos_transf_2 PF00535.26 gi|73667785|ref|YP_303800.1| - 5.1e-34 117.5 0.6 8.9e-26 90.7 0.2 2.4 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|73667785|ref|YP_303800.1| - 3.6e-14 52.9 4.2 2.8e-08 33.6 0.7 3.7 3 1 0 3 3 3 2 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|73667785|ref|YP_303800.1| - 2.1e-09 37.6 0.0 0.0011 18.9 0.0 4.0 4 0 0 4 4 4 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|73667785|ref|YP_303800.1| - 9.4e-05 22.4 0.3 0.45 10.4 0.0 3.1 3 0 0 3 3 3 2 Glycosyl transferase family group 2 Glyco_transf_7C PF02709.14 gi|73667785|ref|YP_303800.1| - 0.011 15.3 0.0 0.19 11.4 0.0 2.4 2 0 0 2 2 2 0 N-terminal domain of galactosyltransferase Acetyltransf_11 PF13720.6 gi|73667785|ref|YP_303800.1| - 0.14 12.6 0.1 66 4.1 0.0 3.3 3 0 0 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Glycos_transf_2 PF00535.26 gi|73667786|ref|YP_303801.1| - 2e-22 79.8 0.1 3.9e-22 78.9 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73667786|ref|YP_303801.1| - 4.8e-12 46.3 0.0 7.2e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|73667786|ref|YP_303801.1| - 2.3e-07 30.6 0.1 3.8e-07 29.8 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|73667786|ref|YP_303801.1| - 0.031 14.8 0.0 0.065 13.8 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_2 PF00535.26 gi|73667787|ref|YP_303802.1| - 6e-21 75.0 2.1 5.3e-10 39.4 0.0 3.0 3 0 0 3 3 3 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73667787|ref|YP_303802.1| - 2.7e-09 37.3 0.0 0.00022 21.2 0.0 2.5 2 1 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|73667787|ref|YP_303802.1| - 0.0057 16.6 0.0 0.033 14.1 0.0 2.1 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glycos_transf_1 PF00534.20 gi|73667788|ref|YP_303803.1| - 3.1e-41 140.8 0.1 5e-41 140.1 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73667788|ref|YP_303803.1| - 9e-33 113.6 0.0 1.3e-32 113.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|73667788|ref|YP_303803.1| - 1.3e-10 41.6 0.0 3.9e-10 40.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73667788|ref|YP_303803.1| - 3.3e-10 40.2 0.0 7.7e-10 39.0 0.0 1.6 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_transf_20 PF00982.21 gi|73667788|ref|YP_303803.1| - 7.3e-06 24.9 0.0 1.3e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 20 Glycogen_syn PF05693.13 gi|73667788|ref|YP_303803.1| - 0.016 13.8 0.0 0.022 13.3 0.0 1.2 1 0 0 1 1 1 0 Glycogen synthase TnpV PF14198.6 gi|73667788|ref|YP_303803.1| - 0.077 13.0 0.1 0.2 11.7 0.1 1.7 1 0 0 1 1 1 0 Transposon-encoded protein TnpV Glyco_transf_4 PF13439.6 gi|73667789|ref|YP_303804.1| - 6.1e-35 120.7 1.1 1.1e-34 119.9 1.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|73667789|ref|YP_303804.1| - 6.1e-29 100.8 0.1 1e-28 100.0 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|73667789|ref|YP_303804.1| - 1.2e-21 77.8 0.0 2.2e-21 77.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 gi|73667789|ref|YP_303804.1| - 4.8e-21 75.6 0.0 1.1e-20 74.5 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|73667789|ref|YP_303804.1| - 5.7e-11 42.6 0.2 1.6e-10 41.2 0.1 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.11 gi|73667789|ref|YP_303804.1| - 0.00025 20.8 1.9 0.051 13.3 0.0 2.3 1 1 1 2 2 2 2 Starch synthase catalytic domain DUF2325 PF10087.9 gi|73667789|ref|YP_303804.1| - 0.0032 17.5 0.0 1.6 8.9 0.0 3.2 3 0 0 3 3 3 1 Uncharacterized protein conserved in bacteria (DUF2325) Glyco_trans_1_2 PF13524.6 gi|73667789|ref|YP_303804.1| - 0.15 12.5 0.0 0.33 11.4 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|73667790|ref|YP_303805.1| - 1.6e-21 76.6 0.0 2.8e-21 75.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73667790|ref|YP_303805.1| - 2.4e-16 60.4 0.0 4.3e-16 59.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73667790|ref|YP_303805.1| - 7.7e-14 52.0 0.0 1.4e-13 51.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|73667790|ref|YP_303805.1| - 1.6e-09 38.4 0.0 6.4e-09 36.5 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|73667790|ref|YP_303805.1| - 0.0038 17.3 0.0 0.0068 16.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like STT3 PF02516.14 gi|73667791|ref|YP_303806.1| - 1.8e-31 109.7 28.5 6.8e-31 107.7 28.5 1.8 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit AglB_L1 PF18079.1 gi|73667791|ref|YP_303806.1| - 1.6e-28 98.8 3.1 3e-28 98.0 3.1 1.5 1 0 0 1 1 1 1 Archaeal glycosylation protein B long peripheral domain Big_6 PF17936.1 gi|73667791|ref|YP_303806.1| - 0.11 12.8 0.4 0.21 11.9 0.4 1.4 1 0 0 1 1 1 0 Bacterial Ig domain YwiC PF14256.6 gi|73667791|ref|YP_303806.1| - 5.3 7.4 15.8 2 8.7 1.1 3.2 3 1 1 4 4 4 0 YwiC-like protein STT3 PF02516.14 gi|73667792|ref|YP_303807.1| - 1.1e-32 113.6 28.3 2.7e-32 112.3 28.3 1.5 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit AglB_L1 PF18079.1 gi|73667792|ref|YP_303807.1| - 2.7e-28 98.1 3.5 5.2e-28 97.2 3.5 1.5 1 0 0 1 1 1 1 Archaeal glycosylation protein B long peripheral domain Big_1 PF02369.16 gi|73667792|ref|YP_303807.1| - 0.074 13.1 2.4 0.19 11.7 2.4 1.7 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) Saf_2TM PF18303.1 gi|73667792|ref|YP_303807.1| - 0.3 10.7 1.9 0.38 10.3 0.1 2.2 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain Aconitase_C PF00694.19 gi|73667793|ref|YP_303808.1| - 1.4e-19 70.7 0.0 1.9e-19 70.3 0.0 1.2 1 0 0 1 1 1 1 Aconitase C-terminal domain WSK PF03832.13 gi|73667793|ref|YP_303808.1| - 0.012 15.3 0.9 0.022 14.5 0.9 1.4 1 0 0 1 1 1 0 WSK motif Mntp PF02659.15 gi|73667796|ref|YP_303811.1| - 4e-51 172.8 17.4 8.5e-51 171.7 9.4 2.0 2 0 0 2 2 2 2 Putative manganese efflux pump DUF373 PF04123.13 gi|73667796|ref|YP_303811.1| - 0.0034 16.9 0.6 0.004 16.7 0.5 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF373) UPF0016 PF01169.19 gi|73667796|ref|YP_303811.1| - 0.8 10.1 14.0 1 9.7 2.7 2.6 2 1 0 2 2 2 0 Uncharacterized protein family UPF0016 Pam17 PF08566.10 gi|73667796|ref|YP_303811.1| - 4.5 7.1 10.3 5.6 6.8 0.7 2.9 1 1 2 3 3 3 0 Mitochondrial import protein Pam17 Iso_dh PF00180.20 gi|73667797|ref|YP_303812.1| - 1.2e-95 320.6 0.0 1.4e-95 320.4 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DUF166 PF02593.14 gi|73667797|ref|YP_303812.1| - 0.14 11.7 0.2 0.73 9.3 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function Cyclase PF04199.13 gi|73667798|ref|YP_303813.1| - 2.4e-19 69.9 0.0 2.9e-19 69.7 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase Rubrerythrin PF02915.17 gi|73667799|ref|YP_303814.1| - 2.2e-11 44.3 6.6 1.7e-05 25.3 0.7 2.1 2 0 0 2 2 2 2 Rubrerythrin DUF2383 PF09537.10 gi|73667799|ref|YP_303814.1| - 2e-05 24.9 1.5 0.019 15.3 0.1 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF2383) Ferritin_2 PF13668.6 gi|73667799|ref|YP_303814.1| - 0.00031 21.0 1.5 0.12 12.5 0.1 2.1 2 0 0 2 2 2 2 Ferritin-like domain Flavoprotein PF02441.19 gi|73667800|ref|YP_303815.1| - 2.3e-18 66.4 0.0 4.1e-18 65.6 0.0 1.3 1 0 0 1 1 1 1 Flavoprotein FMN_red PF03358.15 gi|73667801|ref|YP_303816.1| - 2.8e-31 108.3 0.0 3.9e-31 107.9 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73667801|ref|YP_303816.1| - 4e-05 23.4 0.0 6.6e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin-like fold Beta_helix PF13229.6 gi|73667802|ref|YP_303817.1| - 7.7e-13 48.6 24.1 2.1e-12 47.2 19.8 2.3 1 1 1 2 2 2 2 Right handed beta helix region Glyco_hydro_28 PF00295.17 gi|73667802|ref|YP_303817.1| - 0.00028 20.0 7.4 0.00029 20.0 6.1 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 28 Bac_luciferase PF00296.20 gi|73667803|ref|YP_303818.1| - 6.6e-62 209.7 0.0 8.1e-62 209.4 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase FliE PF02049.18 gi|73667803|ref|YP_303818.1| - 0.18 12.0 0.0 0.35 11.0 0.0 1.5 1 0 0 1 1 1 0 Flagellar hook-basal body complex protein FliE FrhB_FdhB_C PF04432.13 gi|73667804|ref|YP_303819.1| - 1.6e-37 128.7 0.1 3e-37 127.9 0.1 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|73667804|ref|YP_303819.1| - 1.3e-16 60.5 0.0 2.4e-16 59.6 0.0 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.27 gi|73667804|ref|YP_303819.1| - 2.2e-05 24.0 18.6 0.00053 19.7 6.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73667804|ref|YP_303819.1| - 2.7e-05 24.2 7.5 2.7e-05 24.2 7.5 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73667804|ref|YP_303819.1| - 5.2e-05 23.7 9.2 5.2e-05 23.7 9.2 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73667804|ref|YP_303819.1| - 0.00051 20.1 12.3 0.00051 20.1 12.3 2.6 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73667804|ref|YP_303819.1| - 0.00076 19.9 8.0 0.0073 16.7 8.7 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73667804|ref|YP_303819.1| - 0.0015 18.6 18.5 0.033 14.3 3.9 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73667804|ref|YP_303819.1| - 0.0028 17.6 14.6 0.054 13.6 4.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain CTP_transf_like PF01467.26 gi|73667804|ref|YP_303819.1| - 0.0049 17.1 0.1 0.0093 16.2 0.1 1.4 1 0 0 1 1 1 1 Cytidylyltransferase-like Fer4_4 PF12800.7 gi|73667804|ref|YP_303819.1| - 0.022 15.2 1.4 0.022 15.2 1.4 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73667804|ref|YP_303819.1| - 0.034 15.1 15.3 0.18 12.7 12.1 2.9 2 1 1 3 3 2 0 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|73667804|ref|YP_303819.1| - 1.6 8.9 24.6 0.068 13.3 5.6 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73667804|ref|YP_303819.1| - 1.6 9.3 16.4 0.28 11.7 9.8 2.6 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73667804|ref|YP_303819.1| - 3.3 8.3 11.4 16 6.1 5.3 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|73667804|ref|YP_303819.1| - 6.5 7.7 12.2 17 6.4 3.0 2.8 1 1 2 3 3 3 0 4Fe-4S dicluster domain CTP_transf_like PF01467.26 gi|73667805|ref|YP_303820.1| - 3.4e-17 63.0 0.2 9e-17 61.6 0.2 1.6 1 1 0 1 1 1 1 Cytidylyltransferase-like ATP-sulfurylase PF01747.17 gi|73667805|ref|YP_303820.1| - 0.0092 15.5 0.1 1.8 8.0 0.0 2.1 2 0 0 2 2 2 2 ATP-sulfurylase Citrate_ly_lig PF08218.11 gi|73667805|ref|YP_303820.1| - 0.11 12.1 0.1 0.3 10.7 0.1 1.9 1 1 0 1 1 1 0 Citrate lyase ligase C-terminal domain Big_9 PF17963.1 gi|73667806|ref|YP_303821.1| - 0.0069 17.1 0.0 0.01 16.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial Ig domain Cadherin_4 PF17803.1 gi|73667806|ref|YP_303821.1| - 0.06 14.0 0.0 0.093 13.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial cadherin-like domain AAA_18 PF13238.6 gi|73667807|ref|YP_303822.1| - 2.9e-23 82.8 1.7 3e-23 82.8 0.6 1.5 2 0 0 2 2 2 1 AAA domain dNK PF01712.19 gi|73667807|ref|YP_303822.1| - 6.4e-05 22.9 2.5 0.022 14.6 0.6 2.1 1 1 0 2 2 2 2 Deoxynucleoside kinase AAA_28 PF13521.6 gi|73667807|ref|YP_303822.1| - 0.00023 21.4 1.1 0.0025 18.1 1.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|73667807|ref|YP_303822.1| - 0.00039 20.9 0.5 0.0021 18.5 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|73667807|ref|YP_303822.1| - 0.00074 20.0 0.1 0.015 15.7 0.0 2.4 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|73667807|ref|YP_303822.1| - 0.0016 18.6 0.0 0.024 14.8 0.0 2.2 1 1 1 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|73667807|ref|YP_303822.1| - 0.0023 17.6 0.6 0.29 10.8 0.1 2.2 1 1 0 2 2 2 1 Thymidylate kinase CoaE PF01121.20 gi|73667807|ref|YP_303822.1| - 0.0074 16.0 0.2 0.089 12.5 0.1 2.2 1 1 1 2 2 2 1 Dephospho-CoA kinase DUF4085 PF13315.6 gi|73667807|ref|YP_303822.1| - 0.011 15.4 0.3 0.011 15.4 0.3 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF4085) AAA_5 PF07728.14 gi|73667807|ref|YP_303822.1| - 0.013 15.5 0.1 0.018 15.0 0.1 1.4 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|73667807|ref|YP_303822.1| - 0.024 14.9 0.1 0.039 14.2 0.1 1.7 1 1 0 1 1 1 0 AAA domain KTI12 PF08433.10 gi|73667807|ref|YP_303822.1| - 0.039 13.4 0.1 0.084 12.3 0.0 1.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 ADK PF00406.22 gi|73667807|ref|YP_303822.1| - 0.055 13.6 0.1 0.77 9.9 0.0 2.2 1 1 0 2 2 2 0 Adenylate kinase Zeta_toxin PF06414.12 gi|73667807|ref|YP_303822.1| - 0.059 12.6 0.0 0.097 11.9 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin Kinase-PPPase PF03618.14 gi|73667807|ref|YP_303822.1| - 0.076 12.8 0.2 1.4 8.6 0.2 2.1 1 1 0 1 1 1 0 Kinase/pyrophosphorylase PRK PF00485.18 gi|73667807|ref|YP_303822.1| - 0.08 12.7 0.4 0.6 9.8 0.1 2.3 2 2 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family UPF0180 PF03698.13 gi|73667807|ref|YP_303822.1| - 0.082 13.1 0.5 2.1 8.6 0.5 2.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0180) DUF2968 PF11180.8 gi|73667807|ref|YP_303822.1| - 0.11 12.1 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) MeaB PF03308.16 gi|73667807|ref|YP_303822.1| - 0.13 11.2 0.2 0.76 8.7 0.1 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Peptidase_S8 PF00082.22 gi|73667808|ref|YP_303823.1| - 2.1e-33 115.9 13.3 4.3e-33 114.9 13.3 1.5 1 1 0 1 1 1 1 Subtilase family Cyt-b5 PF00173.28 gi|73667809|ref|YP_303824.1| - 5.1e-13 49.0 0.1 6.1e-13 48.7 0.1 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain CsiD PF08943.10 gi|73667809|ref|YP_303824.1| - 0.13 11.3 0.1 0.16 11.1 0.1 1.0 1 0 0 1 1 1 0 CsiD Thioredox_DsbH PF03190.15 gi|73667810|ref|YP_303825.1| - 4.4e-77 257.6 0.1 7.7e-77 256.8 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|73667810|ref|YP_303825.1| - 9.6e-11 41.7 0.0 1.7e-10 40.9 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like C5-epim_C PF06662.13 gi|73667810|ref|YP_303825.1| - 0.0014 18.1 1.0 0.06 12.8 0.1 2.4 2 0 0 2 2 2 1 D-glucuronyl C5-epimerase C-terminus Glyco_hydro_88 PF07470.13 gi|73667810|ref|YP_303825.1| - 0.0039 16.3 0.6 0.13 11.3 0.1 2.4 2 1 0 2 2 2 1 Glycosyl Hydrolase Family 88 Glyco_hydro_76 PF03663.14 gi|73667810|ref|YP_303825.1| - 0.0049 16.4 0.1 0.6 9.6 0.0 2.6 2 1 0 2 2 2 1 Glycosyl hydrolase family 76 LANC_like PF05147.13 gi|73667810|ref|YP_303825.1| - 0.0055 15.3 0.1 0.49 8.9 0.0 2.6 2 0 0 2 2 2 1 Lanthionine synthetase C-like protein Pec_lyase PF09492.10 gi|73667810|ref|YP_303825.1| - 0.0063 15.9 0.4 0.15 11.3 0.0 2.3 2 0 0 2 2 2 1 Pectic acid lyase GlcNAc_2-epim PF07221.11 gi|73667810|ref|YP_303825.1| - 0.0079 15.5 0.1 1.6 7.9 0.0 2.9 2 1 0 3 3 3 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Glyco_hydro_127 PF07944.12 gi|73667810|ref|YP_303825.1| - 0.098 11.1 0.2 2.6 6.4 0.0 2.2 2 0 0 2 2 2 0 Beta-L-arabinofuranosidase, GH127 Sigma70_r4 PF04545.16 gi|73667810|ref|YP_303825.1| - 0.11 12.1 0.0 0.44 10.1 0.0 2.1 1 1 0 1 1 1 0 Sigma-70, region 4 Prenyltransf PF01255.19 gi|73667812|ref|YP_303827.1| - 4.1e-71 239.1 0.0 4.9e-71 238.8 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase DIOX_N PF14226.6 gi|73667812|ref|YP_303827.1| - 0.12 13.2 0.1 19 6.0 0.0 2.6 2 1 1 3 3 3 0 non-haem dioxygenase in morphine synthesis N-terminal DUF2551 PF10826.8 gi|73667813|ref|YP_303828.1| - 4.4e-31 107.0 0.5 4.9e-31 106.8 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) FUR PF01475.19 gi|73667813|ref|YP_303828.1| - 0.055 13.6 0.0 0.066 13.4 0.0 1.0 1 0 0 1 1 1 0 Ferric uptake regulator family ACPS PF01648.20 gi|73667814|ref|YP_303829.1| - 0.0013 18.9 0.5 0.0041 17.2 0.1 2.1 2 2 0 2 2 2 1 4'-phosphopantetheinyl transferase superfamily PP-binding PF00550.25 gi|73667815|ref|YP_303830.1| - 1.8e-05 25.0 0.1 2e-05 24.9 0.1 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site YqbF PF14553.6 gi|73667815|ref|YP_303830.1| - 0.14 12.0 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 YqbF, hypothetical protein domain AMP-binding PF00501.28 gi|73667816|ref|YP_303831.1| - 2.3e-66 224.1 0.0 2.8e-66 223.9 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|73667816|ref|YP_303831.1| - 1.3e-11 45.3 0.0 2.8e-11 44.2 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain tRNA_Me_trans PF03054.16 gi|73667817|ref|YP_303832.1| - 0.0013 17.6 0.1 0.0028 16.5 0.0 1.6 1 1 1 2 2 2 1 tRNA methyl transferase QueC PF06508.13 gi|73667817|ref|YP_303832.1| - 0.0078 15.7 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|73667817|ref|YP_303832.1| - 0.022 14.4 0.0 0.034 13.8 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase NAD_synthase PF02540.17 gi|73667817|ref|YP_303832.1| - 0.034 13.3 0.0 0.061 12.4 0.0 1.4 1 0 0 1 1 1 0 NAD synthase ATP_bind_3 PF01171.20 gi|73667817|ref|YP_303832.1| - 0.14 11.9 0.0 0.28 10.9 0.0 1.5 2 0 0 2 2 2 0 PP-loop family NAD_synthase PF02540.17 gi|73667818|ref|YP_303833.1| - 1.8e-52 177.9 0.1 4.8e-31 107.7 0.1 2.1 2 0 0 2 2 2 2 NAD synthase ATP_bind_3 PF01171.20 gi|73667818|ref|YP_303833.1| - 0.044 13.5 0.1 0.13 12.0 0.0 1.9 2 0 0 2 2 2 0 PP-loop family tRNA_Me_trans PF03054.16 gi|73667818|ref|YP_303833.1| - 0.07 11.9 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase QueC PF06508.13 gi|73667818|ref|YP_303833.1| - 0.078 12.5 0.0 0.24 10.9 0.0 1.8 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC DUF362 PF04015.12 gi|73667819|ref|YP_303834.1| - 1.3e-52 179.1 0.0 1.8e-52 178.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|73667819|ref|YP_303834.1| - 2.1e-08 33.6 15.5 2.9e-05 23.7 5.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73667819|ref|YP_303834.1| - 1.9e-05 24.4 15.8 0.0092 16.0 4.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73667819|ref|YP_303834.1| - 0.00011 22.7 15.3 0.00027 21.5 15.3 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73667819|ref|YP_303834.1| - 0.00017 21.7 15.9 0.00029 20.9 15.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73667819|ref|YP_303834.1| - 0.00047 20.2 15.8 0.00095 19.3 15.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|73667819|ref|YP_303834.1| - 0.0018 18.4 7.8 0.89 9.7 4.8 2.4 1 1 1 2 2 2 2 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_6 PF12837.7 gi|73667819|ref|YP_303834.1| - 0.0038 17.2 15.8 0.0059 16.6 3.0 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73667819|ref|YP_303834.1| - 0.0061 16.6 16.7 0.031 14.4 17.1 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Lar_N PF09861.9 gi|73667819|ref|YP_303834.1| - 0.031 13.4 0.0 0.072 12.3 0.0 1.6 2 0 0 2 2 2 0 Lactate racemase N-terminal domain Fer4_16 PF13484.6 gi|73667819|ref|YP_303834.1| - 0.093 13.7 15.6 0.47 11.4 3.1 2.5 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|73667819|ref|YP_303834.1| - 0.23 12.0 16.7 1.4 9.6 5.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73667819|ref|YP_303834.1| - 1.4 9.5 18.1 3.1 8.4 2.6 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73667819|ref|YP_303834.1| - 1.8 8.8 10.7 9.3 6.5 10.8 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73667819|ref|YP_303834.1| - 6.6 7.3 18.7 11 6.5 4.2 2.4 1 1 3 4 4 3 0 4Fe-4S dicluster domain Hexapep PF00132.24 gi|73667820|ref|YP_303835.1| - 1.7e-08 33.8 12.0 2.8e-05 23.7 6.1 3.4 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73667820|ref|YP_303835.1| - 0.00028 20.6 19.4 0.0062 16.3 9.0 3.6 2 2 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase YdjM PF04307.14 gi|73667821|ref|YP_303836.1| - 9.8e-11 41.3 7.3 1.5e-10 40.7 7.3 1.3 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase ABC2_membrane_3 PF12698.7 gi|73667821|ref|YP_303836.1| - 2.8 7.0 19.2 34 3.4 19.2 2.0 1 1 1 2 2 2 0 ABC-2 family transporter protein Radical_SAM PF04055.21 gi|73667822|ref|YP_303837.1| - 1.1e-06 29.1 0.0 4.7e-06 27.1 0.0 2.0 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|73667822|ref|YP_303837.1| - 3.7e-06 27.0 0.0 8.4e-06 25.9 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|73667822|ref|YP_303837.1| - 0.00022 21.5 0.2 0.00065 20.0 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain DUF3512 PF12024.8 gi|73667822|ref|YP_303837.1| - 0.039 13.5 0.0 0.066 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3512) Fer4 PF00037.27 gi|73667823|ref|YP_303838.1| - 3e-13 48.9 14.6 7.8e-07 28.7 2.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73667823|ref|YP_303838.1| - 9.2e-09 35.0 15.7 1.5e-05 24.8 3.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73667823|ref|YP_303838.1| - 1.2e-08 35.8 13.1 1.6e-05 25.8 1.7 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|73667823|ref|YP_303838.1| - 1.7e-08 34.5 30.4 1.4e-06 28.3 16.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73667823|ref|YP_303838.1| - 1.8e-08 34.4 24.8 5.3e-07 29.7 14.0 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73667823|ref|YP_303838.1| - 8.3e-08 31.9 13.6 0.00014 21.8 3.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73667823|ref|YP_303838.1| - 3.8e-07 30.6 12.7 1e-06 29.2 12.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73667823|ref|YP_303838.1| - 5.4e-07 29.6 15.0 0.0034 17.8 4.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73667823|ref|YP_303838.1| - 4.6e-05 23.5 16.1 0.02 15.0 5.3 2.0 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73667823|ref|YP_303838.1| - 9.7e-05 22.7 14.6 0.0061 17.0 2.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73667823|ref|YP_303838.1| - 0.00099 19.9 16.0 0.13 13.3 4.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73667823|ref|YP_303838.1| - 0.0026 17.9 8.8 0.0036 17.5 8.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73667823|ref|YP_303838.1| - 0.0038 17.7 12.1 0.033 14.7 2.5 2.1 1 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73667823|ref|YP_303838.1| - 0.0085 16.6 12.2 0.38 11.3 5.0 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|73667823|ref|YP_303838.1| - 0.52 11.2 13.7 2.5 9.0 2.2 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73667823|ref|YP_303838.1| - 0.86 10.4 13.7 0.41 11.4 2.8 2.6 2 1 0 2 2 2 0 4Fe-4S single cluster domain Cyclase PF04199.13 gi|73667824|ref|YP_303839.1| - 1e-23 84.0 0.0 1.3e-23 83.8 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase DUF4736 PF15883.5 gi|73667825|ref|YP_303840.1| - 0.0051 16.6 0.0 0.0074 16.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4736) PUB_1 PF18486.1 gi|73667825|ref|YP_303840.1| - 0.051 13.4 0.0 0.082 12.8 0.0 1.3 1 0 0 1 1 1 0 PNGase/UBA- or UBX-containing domain Ham1p_like PF01725.16 gi|73667827|ref|YP_303842.1| - 9.9e-52 175.6 0.0 1.1e-51 175.4 0.0 1.0 1 0 0 1 1 1 1 Ham1 family MutL PF13941.6 gi|73667827|ref|YP_303842.1| - 0.11 11.1 0.0 0.13 10.8 0.0 1.1 1 0 0 1 1 1 0 MutL protein Peptidase_M22 PF00814.25 gi|73667828|ref|YP_303843.1| - 4.3e-88 295.5 0.2 5.8e-88 295.1 0.2 1.1 1 0 0 1 1 1 1 Glycoprotease family Kdo PF06293.14 gi|73667828|ref|YP_303843.1| - 3.7e-07 29.7 0.0 1.7e-06 27.6 0.0 1.9 1 1 1 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 gi|73667828|ref|YP_303843.1| - 5.5e-07 29.4 0.0 9.6e-07 28.6 0.0 1.3 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|73667828|ref|YP_303843.1| - 3e-05 23.5 0.0 4.7e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|73667828|ref|YP_303843.1| - 4.5e-05 23.5 0.0 0.00068 19.6 0.0 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family Carbam_trans_N PF02543.15 gi|73667828|ref|YP_303843.1| - 0.0012 18.5 0.0 0.035 13.8 0.0 2.4 2 0 0 2 2 2 1 Carbamoyltransferase N-terminus Pkinase_Tyr PF07714.17 gi|73667828|ref|YP_303843.1| - 0.012 14.9 0.0 0.019 14.2 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase TPR_2 PF07719.17 gi|73667829|ref|YP_303844.1| - 7.9e-93 297.3 78.3 1.6e-08 34.0 0.1 21.7 22 1 1 23 23 22 20 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73667829|ref|YP_303844.1| - 9.9e-93 300.5 61.9 1.3e-08 34.3 0.1 22.4 22 1 0 22 22 22 17 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73667829|ref|YP_303844.1| - 2.8e-55 184.7 58.2 9.9e-10 38.9 1.2 14.5 7 3 11 18 18 18 16 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73667829|ref|YP_303844.1| - 6.6e-55 178.8 48.0 0.00018 21.5 0.0 20.7 21 0 0 21 21 20 10 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73667829|ref|YP_303844.1| - 5.9e-47 157.9 56.9 3e-08 33.8 0.2 15.8 9 4 7 16 16 16 14 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73667829|ref|YP_303844.1| - 2.5e-44 148.7 41.4 2.9e-09 36.4 0.2 16.8 12 2 7 19 19 18 9 TPR repeat TPR_19 PF14559.6 gi|73667829|ref|YP_303844.1| - 5.9e-44 148.4 40.8 5.1e-07 30.1 0.0 13.5 10 4 4 14 14 14 10 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73667829|ref|YP_303844.1| - 7.3e-43 141.6 62.3 0.00015 22.3 0.3 19.9 9 5 11 20 20 20 10 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73667829|ref|YP_303844.1| - 5.5e-40 132.9 27.0 9.3e-06 25.7 0.0 16.6 19 0 0 19 19 16 6 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73667829|ref|YP_303844.1| - 4.7e-39 132.4 25.2 2.4e-07 30.8 0.2 12.2 8 3 5 13 13 13 9 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73667829|ref|YP_303844.1| - 2.6e-30 102.2 42.3 0.0033 17.3 0.1 19.7 19 1 1 20 20 20 5 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73667829|ref|YP_303844.1| - 1.8e-28 98.5 29.5 1.7e-05 24.9 0.3 10.9 6 4 4 11 11 11 8 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|73667829|ref|YP_303844.1| - 1e-21 76.1 56.7 0.21 12.3 0.2 19.9 21 1 1 22 22 19 5 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|73667829|ref|YP_303844.1| - 1.1e-15 57.5 25.1 0.065 13.3 0.0 13.1 12 2 2 14 14 14 3 Fis1 C-terminal tetratricopeptide repeat TPR_15 PF13429.6 gi|73667829|ref|YP_303844.1| - 1.7e-14 53.8 18.7 0.0002 20.7 0.0 8.0 3 2 6 9 9 9 3 Tetratricopeptide repeat NARP1 PF12569.8 gi|73667829|ref|YP_303844.1| - 1.8e-13 50.3 8.4 0.2 10.5 0.1 8.5 5 3 3 8 8 8 3 NMDA receptor-regulated protein 1 SRP_TPR_like PF17004.5 gi|73667829|ref|YP_303844.1| - 2.6e-12 46.8 9.8 0.012 15.7 0.0 8.0 7 3 1 8 8 7 4 Putative TPR-like repeat TPR_10 PF13374.6 gi|73667829|ref|YP_303844.1| - 9.5e-11 41.2 45.2 0.036 13.9 0.0 15.6 17 0 0 17 17 16 3 Tetratricopeptide repeat BTAD PF03704.17 gi|73667829|ref|YP_303844.1| - 5.6e-09 36.6 35.2 0.018 15.5 0.0 9.6 4 2 5 10 10 10 4 Bacterial transcriptional activator domain DUF3856 PF12968.7 gi|73667829|ref|YP_303844.1| - 8.3e-09 35.7 22.1 0.56 10.3 0.1 11.8 7 6 4 12 12 12 2 Domain of Unknown Function (DUF3856) TPR_20 PF14561.6 gi|73667829|ref|YP_303844.1| - 1.2e-08 35.2 10.7 3 8.2 0.0 8.5 7 1 1 8 8 8 2 Tetratricopeptide repeat TPR_21 PF09976.9 gi|73667829|ref|YP_303844.1| - 6.9e-07 29.2 19.3 0.16 11.6 0.2 8.5 7 2 2 9 9 9 2 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 gi|73667829|ref|YP_303844.1| - 4.3e-05 23.7 17.2 26 5.8 0.0 11.4 12 0 0 12 12 9 0 Tetratricopeptide repeat TPR_3 PF07720.12 gi|73667829|ref|YP_303844.1| - 8.4e-05 22.5 12.9 3 7.9 0.0 7.4 7 0 0 7 7 7 2 Tetratricopeptide repeat RPN7 PF10602.9 gi|73667829|ref|YP_303844.1| - 0.00028 20.6 8.8 17 5.0 0.1 7.8 7 3 1 8 8 8 0 26S proteasome subunit RPN7 HrpB1_HrpK PF09613.10 gi|73667829|ref|YP_303844.1| - 0.0031 17.1 0.0 0.56 9.8 0.0 3.6 3 0 0 3 3 3 1 Bacterial type III secretion protein (HrpB1_HrpK) FAT PF02259.23 gi|73667829|ref|YP_303844.1| - 0.012 14.9 0.1 5.6 6.1 0.0 3.2 2 0 0 2 2 2 0 FAT domain ChAPs PF09295.10 gi|73667829|ref|YP_303844.1| - 0.015 14.3 0.0 0.68 8.9 0.0 2.8 3 1 0 3 3 3 0 ChAPs (Chs5p-Arf1p-binding proteins) DDT PF02791.17 gi|73667829|ref|YP_303844.1| - 0.043 14.1 0.1 21 5.5 0.0 5.2 7 0 0 7 7 4 0 DDT domain MIT PF04212.18 gi|73667829|ref|YP_303844.1| - 0.054 13.6 26.6 1.6 8.9 0.1 10.6 12 1 0 12 12 11 0 MIT (microtubule interacting and transport) domain ANAPC5 PF12862.7 gi|73667829|ref|YP_303844.1| - 1.4 9.1 8.0 62 3.8 0.0 6.4 8 1 0 8 8 6 0 Anaphase-promoting complex subunit 5 Alkyl_sulf_dimr PF14863.6 gi|73667829|ref|YP_303844.1| - 1.6 9.2 9.4 28 5.2 0.0 5.4 5 1 1 6 6 6 0 Alkyl sulfatase dimerisation Ribosomal_S27 PF01599.19 gi|73667830|ref|YP_303845.1| - 2.3e-20 72.5 2.9 2.5e-20 72.4 2.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S27a Nudix_N_2 PF14803.6 gi|73667830|ref|YP_303845.1| - 0.0003 20.6 4.8 0.0046 16.8 5.3 2.2 2 1 0 2 2 2 1 Nudix N-terminal Ribosomal_L37e PF01907.19 gi|73667830|ref|YP_303845.1| - 0.0004 20.5 1.4 0.00047 20.3 1.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e TF_Zn_Ribbon PF08271.12 gi|73667830|ref|YP_303845.1| - 0.003 17.0 2.1 0.004 16.6 2.1 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding DUF1451 PF07295.11 gi|73667830|ref|YP_303845.1| - 0.038 14.0 0.7 0.04 13.9 0.7 1.0 1 0 0 1 1 1 0 Zinc-ribbon containing domain zf-NADH-PPase PF09297.11 gi|73667830|ref|YP_303845.1| - 0.058 13.1 8.8 0.39 10.4 8.8 2.0 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain DZR PF12773.7 gi|73667830|ref|YP_303845.1| - 0.058 13.4 2.8 0.14 12.2 2.8 1.6 1 1 0 1 1 1 0 Double zinc ribbon GFA PF04828.14 gi|73667830|ref|YP_303845.1| - 0.068 13.5 1.5 0.34 11.3 0.1 1.9 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_13 PF09855.9 gi|73667830|ref|YP_303845.1| - 0.073 13.2 2.8 0.32 11.2 0.6 2.2 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) NOB1_Zn_bind PF08772.11 gi|73667830|ref|YP_303845.1| - 0.11 12.7 6.1 0.17 12.1 0.5 2.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 gi|73667830|ref|YP_303845.1| - 0.14 11.9 7.2 0.95 9.3 1.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|73667830|ref|YP_303845.1| - 0.19 11.6 6.5 3.1 7.8 6.5 2.1 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit zf-ribbon_3 PF13248.6 gi|73667830|ref|YP_303845.1| - 0.39 10.2 5.5 1.9 8.0 0.6 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|73667830|ref|YP_303845.1| - 0.46 10.5 4.7 1.2 9.2 4.7 1.8 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Ribosomal_S24e PF01282.19 gi|73667831|ref|YP_303846.1| - 3e-25 87.9 0.1 3.7e-25 87.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e Ribosomal_S4 PF00163.19 gi|73667831|ref|YP_303846.1| - 0.11 13.4 0.1 0.19 12.7 0.1 1.5 1 0 0 1 1 1 0 Ribosomal protein S4/S9 N-terminal domain DUF359 PF04019.12 gi|73667832|ref|YP_303847.1| - 9.8e-44 148.0 0.1 1.2e-43 147.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Spt4 PF06093.13 gi|73667833|ref|YP_303848.1| - 1.7e-13 50.4 0.0 2.1e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger Prok-RING_4 PF14447.6 gi|73667833|ref|YP_303848.1| - 0.0033 17.3 0.9 0.0045 16.8 0.9 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 TF_Zn_Ribbon PF08271.12 gi|73667833|ref|YP_303848.1| - 0.032 13.7 0.3 0.14 11.7 0.0 1.9 2 0 0 2 2 2 0 TFIIB zinc-binding zf-C3HC4_3 PF13920.6 gi|73667833|ref|YP_303848.1| - 0.045 13.6 2.6 0.066 13.1 2.6 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.6 gi|73667833|ref|YP_303848.1| - 0.071 12.5 2.3 0.38 10.2 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.9 gi|73667833|ref|YP_303848.1| - 0.16 12.1 2.0 2.2 8.5 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Prim_Zn_Ribbon PF08273.12 gi|73667833|ref|YP_303848.1| - 1.5 9.2 5.2 2.4 8.5 0.4 2.1 1 1 1 2 2 2 0 Zinc-binding domain of primase-helicase SHS2_Rpb7-N PF03876.17 gi|73667834|ref|YP_303849.1| - 1.1e-19 70.5 0.4 2.5e-19 69.4 0.1 1.7 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|73667834|ref|YP_303849.1| - 8.8e-12 45.2 0.9 1.6e-11 44.3 0.9 1.5 1 0 0 1 1 1 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.12 gi|73667834|ref|YP_303849.1| - 0.0039 17.4 0.0 0.0098 16.1 0.0 1.6 2 0 0 2 2 2 1 RNA polymerase III subunit Rpc25 DUF826 PF05696.11 gi|73667834|ref|YP_303849.1| - 0.022 14.8 0.0 0.051 13.7 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF826) RNase_II_C_S1 PF18614.1 gi|73667834|ref|YP_303849.1| - 0.078 12.9 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain PIN_9 PF18477.1 gi|73667835|ref|YP_303850.1| - 1.5e-43 147.8 0.1 1.7e-43 147.6 0.1 1.0 1 0 0 1 1 1 1 PIN like domain PIN_5 PF08745.11 gi|73667835|ref|YP_303850.1| - 3.7e-05 23.3 0.2 0.0046 16.4 0.1 2.1 1 1 1 2 2 2 2 PINc domain ribonuclease DUF188 PF02639.14 gi|73667835|ref|YP_303850.1| - 0.045 13.4 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 PIN PF01850.21 gi|73667835|ref|YP_303850.1| - 0.076 13.5 0.2 0.21 12.1 0.2 1.7 1 1 0 1 1 1 0 PIN domain DUF5615 PF18480.1 gi|73667835|ref|YP_303850.1| - 0.13 12.1 0.0 0.6 9.9 0.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF5615) GTP_EFTU PF00009.27 gi|73667836|ref|YP_303851.1| - 3.9e-33 114.6 0.6 1e-32 113.3 0.6 1.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|73667836|ref|YP_303851.1| - 3.4e-32 110.5 0.9 8e-32 109.3 0.9 1.7 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 gi|73667836|ref|YP_303851.1| - 1e-07 32.2 0.9 2.8e-07 30.8 0.9 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RsgA_GTPase PF03193.16 gi|73667836|ref|YP_303851.1| - 2.7e-05 24.1 1.0 0.00052 20.0 0.2 2.3 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1_Xtn PF16897.5 gi|73667836|ref|YP_303851.1| - 0.0014 18.6 0.1 0.0034 17.4 0.1 1.6 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain PduV-EutP PF10662.9 gi|73667836|ref|YP_303851.1| - 0.0015 18.3 1.9 0.87 9.3 0.4 2.7 3 0 0 3 3 3 2 Ethanolamine utilisation - propanediol utilisation Nop10p PF04135.12 gi|73667836|ref|YP_303851.1| - 0.0015 18.5 2.2 0.0028 17.7 2.2 1.4 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family MMR_HSR1 PF01926.23 gi|73667836|ref|YP_303851.1| - 0.0026 17.8 0.0 0.021 14.9 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase PolC_DP2 PF03833.13 gi|73667836|ref|YP_303851.1| - 0.031 12.1 0.1 0.044 11.7 0.1 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 cobW PF02492.19 gi|73667836|ref|YP_303851.1| - 0.036 13.6 0.2 0.66 9.5 0.1 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SRPRB PF09439.10 gi|73667836|ref|YP_303851.1| - 0.13 11.7 0.0 5.1 6.5 0.0 2.2 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit DUF35_N PF12172.8 gi|73667836|ref|YP_303851.1| - 0.42 10.5 2.4 0.68 9.9 2.4 1.3 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TF_Zn_Ribbon PF08271.12 gi|73667836|ref|YP_303851.1| - 0.42 10.2 7.8 1.1 8.9 7.8 1.7 1 1 0 1 1 1 0 TFIIB zinc-binding DUF1297 PF06973.12 gi|73667837|ref|YP_303852.1| - 5.3e-79 264.1 0.0 7.2e-79 263.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|73667837|ref|YP_303852.1| - 4.9e-45 152.4 0.0 7.7e-45 151.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) SpoIIM PF01944.17 gi|73667838|ref|YP_303853.1| - 1.2e-34 119.6 24.1 1.6e-34 119.2 24.1 1.1 1 0 0 1 1 1 1 Stage II sporulation protein M DUF63 PF01889.17 gi|73667839|ref|YP_303854.1| - 1.5e-102 343.5 18.5 1.6e-102 343.3 18.5 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 DUF2244 PF10003.9 gi|73667839|ref|YP_303854.1| - 0.69 9.6 4.2 1.9 8.1 4.2 1.7 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) Fe-ADH_2 PF13685.6 gi|73667840|ref|YP_303855.1| - 1.6e-77 260.6 2.3 2e-77 260.3 2.3 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|73667840|ref|YP_303855.1| - 1.2e-25 90.1 5.6 1.8e-24 86.3 5.6 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|73667840|ref|YP_303855.1| - 5.5e-06 25.7 0.2 2.6e-05 23.5 0.2 2.0 1 1 0 1 1 1 1 3-dehydroquinate synthase AIRC PF00731.20 gi|73667840|ref|YP_303855.1| - 4.5e-05 23.1 1.4 0.00011 21.9 1.4 1.6 1 0 0 1 1 1 1 AIR carboxylase UPF0179 PF03684.13 gi|73667841|ref|YP_303856.1| - 3.3e-54 182.6 3.4 3.7e-54 182.4 3.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) DUF2150 PF09920.9 gi|73667842|ref|YP_303857.1| - 5.6e-70 235.2 2.7 6.8e-70 234.9 2.7 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) Glycos_transf_1 PF00534.20 gi|73667843|ref|YP_303858.1| - 7.1e-31 107.0 0.0 1.8e-30 105.7 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73667843|ref|YP_303858.1| - 2.6e-24 86.2 0.0 4.7e-24 85.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73667843|ref|YP_303858.1| - 5.9e-22 78.5 0.1 2e-21 76.7 0.0 1.9 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_transf_5 PF08323.11 gi|73667843|ref|YP_303858.1| - 2.2e-14 53.7 0.2 2.1e-06 27.6 0.0 2.2 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_trans_4_4 PF13579.6 gi|73667843|ref|YP_303858.1| - 3.8e-14 53.4 0.0 6.4e-14 52.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|73667843|ref|YP_303858.1| - 1.5e-09 38.0 0.0 3.5e-09 36.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|73667843|ref|YP_303858.1| - 0.00088 19.6 0.0 0.0021 18.4 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF4921 PF16268.5 gi|73667844|ref|YP_303859.1| - 1.1e-13 50.8 0.0 6e-12 45.1 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4921) GalP_UDP_transf PF01087.22 gi|73667844|ref|YP_303859.1| - 5.2e-13 49.8 0.0 1.5e-12 48.3 0.0 1.8 1 1 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, N-terminal domain DUF4931 PF16285.5 gi|73667844|ref|YP_303859.1| - 0.00016 21.0 0.1 0.00057 19.3 0.0 1.8 3 0 0 3 3 3 1 Domain of unknown function (DUF4931) GalP_UDP_tr_C PF02744.17 gi|73667844|ref|YP_303859.1| - 0.0097 15.6 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, C-terminal domain HIT PF01230.23 gi|73667844|ref|YP_303859.1| - 0.013 16.2 0.0 0.035 14.8 0.0 1.6 2 0 0 2 2 2 0 HIT domain Glycogen_syn PF05693.13 gi|73667845|ref|YP_303860.1| - 8.5e-22 77.5 0.0 1.5e-10 40.3 0.0 2.5 2 1 0 2 2 2 2 Glycogen synthase Glyco_transf_4 PF13439.6 gi|73667845|ref|YP_303860.1| - 1.5e-07 31.5 0.1 4.7e-07 30.0 0.0 1.9 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|73667845|ref|YP_303860.1| - 0.0022 17.5 0.0 0.0066 16.0 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 gi|73667845|ref|YP_303860.1| - 0.015 15.0 0.0 0.04 13.6 0.0 1.7 2 0 0 2 2 2 0 Starch synthase catalytic domain Glyco_trans_1_4 PF13692.6 gi|73667845|ref|YP_303860.1| - 0.024 15.1 0.1 0.12 12.8 0.0 2.1 2 0 0 2 2 2 0 Glycosyl transferases group 1 DUF4091 PF13320.6 gi|73667845|ref|YP_303860.1| - 0.16 12.1 0.0 0.46 10.6 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4091) ABC_tran PF00005.27 gi|73667846|ref|YP_303861.1| - 1.2e-24 87.4 0.0 2e-24 86.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73667846|ref|YP_303861.1| - 8.6e-12 45.5 2.2 8.8e-06 25.7 0.6 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73667846|ref|YP_303861.1| - 6.1e-07 29.8 0.1 2.7e-06 27.7 0.1 1.9 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|73667846|ref|YP_303861.1| - 0.00011 21.7 0.2 0.0023 17.4 0.1 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|73667846|ref|YP_303861.1| - 0.00025 20.9 0.1 0.023 14.4 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 gi|73667846|ref|YP_303861.1| - 0.00031 21.2 0.0 0.00073 20.0 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 gi|73667846|ref|YP_303861.1| - 0.00069 19.4 0.1 0.047 13.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|73667846|ref|YP_303861.1| - 0.00075 19.2 1.5 0.0011 18.7 0.2 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain Rad17 PF03215.15 gi|73667846|ref|YP_303861.1| - 0.0038 17.2 0.0 1.1 9.1 0.0 2.2 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_7 PF12775.7 gi|73667846|ref|YP_303861.1| - 0.0041 16.7 0.0 0.007 15.9 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF815 PF05673.13 gi|73667846|ref|YP_303861.1| - 0.007 15.6 0.1 0.015 14.5 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_23 PF13476.6 gi|73667846|ref|YP_303861.1| - 0.012 16.1 0.1 0.023 15.2 0.1 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|73667846|ref|YP_303861.1| - 0.016 15.3 0.0 0.034 14.2 0.0 1.7 2 0 0 2 2 1 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 gi|73667846|ref|YP_303861.1| - 0.039 13.9 0.2 5.5 6.9 0.0 2.3 2 0 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 gi|73667846|ref|YP_303861.1| - 0.048 13.6 0.1 0.085 12.8 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase DUF87 PF01935.17 gi|73667846|ref|YP_303861.1| - 0.05 13.7 0.2 0.11 12.6 0.1 1.6 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_14 PF13173.6 gi|73667846|ref|YP_303861.1| - 0.076 13.1 0.0 0.57 10.2 0.0 2.2 2 1 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|73667846|ref|YP_303861.1| - 0.08 12.7 0.1 0.8 9.4 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein FtsK_SpoIIIE PF01580.18 gi|73667846|ref|YP_303861.1| - 0.092 12.1 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family TniB PF05621.11 gi|73667846|ref|YP_303861.1| - 0.1 12.0 0.0 0.27 10.6 0.0 1.6 2 0 0 2 2 2 0 Bacterial TniB protein ATPase_2 PF01637.18 gi|73667846|ref|YP_303861.1| - 0.1 12.5 0.1 0.42 10.5 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Roc PF08477.13 gi|73667846|ref|YP_303861.1| - 0.11 12.7 0.0 0.25 11.6 0.0 1.6 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_10 PF12846.7 gi|73667846|ref|YP_303861.1| - 0.11 11.4 0.1 0.55 9.1 0.0 2.1 3 0 0 3 3 3 0 AAA-like domain AAA_30 PF13604.6 gi|73667846|ref|YP_303861.1| - 0.15 11.8 0.0 0.79 9.4 0.0 2.0 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|73667846|ref|YP_303861.1| - 0.16 11.3 0.1 0.46 9.8 0.0 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Acetyltransf_3 PF13302.7 gi|73667848|ref|YP_303863.1| - 9.8e-19 68.4 0.0 1.1e-18 68.2 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73667848|ref|YP_303863.1| - 4.2e-13 49.6 0.2 5.2e-13 49.3 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|73667848|ref|YP_303863.1| - 1e-08 35.5 0.4 1e-08 35.5 0.4 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|73667848|ref|YP_303863.1| - 0.0013 18.4 0.0 0.0018 18.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73667848|ref|YP_303863.1| - 0.0026 17.7 0.1 0.0035 17.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73667848|ref|YP_303863.1| - 0.0058 17.0 0.2 0.0081 16.6 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DNA_alkylation PF08713.11 gi|73667849|ref|YP_303864.1| - 2.8e-62 210.2 3.0 3.2e-62 210.0 3.0 1.0 1 0 0 1 1 1 1 DNA alkylation repair enzyme Cas_Cas6 PF01881.16 gi|73667850|ref|YP_303865.1| - 3.1e-38 131.6 2.4 1.3e-36 126.4 0.2 2.1 1 1 1 2 2 2 2 CRISPR associated protein Cas6 CRISPR_Cas6 PF10040.9 gi|73667850|ref|YP_303865.1| - 0.021 15.5 0.1 0.076 13.7 0.1 2.0 1 1 0 1 1 1 0 CRISPR-associated endoribonuclease Cas6 Cas_Cas4 PF01930.17 gi|73667851|ref|YP_303866.1| - 2.1e-54 184.0 1.6 2.6e-54 183.7 1.6 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|73667851|ref|YP_303866.1| - 5.9e-08 32.9 0.0 6.5e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Cas_Cas1 PF01867.16 gi|73667852|ref|YP_303867.1| - 1.3e-63 214.8 0.1 1.6e-63 214.5 0.1 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 CRISPR_Cas2 PF09827.9 gi|73667853|ref|YP_303868.1| - 1.2e-21 76.6 0.7 1.4e-21 76.5 0.7 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 EspA PF03433.13 gi|73667853|ref|YP_303868.1| - 0.019 14.8 0.0 0.024 14.5 0.0 1.1 1 0 0 1 1 1 0 EspA-like secreted protein Cas_Cas2CT1978 PF09707.10 gi|73667853|ref|YP_303868.1| - 0.023 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas2CT1978) IZUMO PF15005.6 gi|73667853|ref|YP_303868.1| - 0.028 14.9 0.1 0.034 14.7 0.1 1.1 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated ApoO PF09769.9 gi|73667853|ref|YP_303868.1| - 0.062 13.3 0.1 0.075 13.0 0.1 1.2 1 0 0 1 1 1 0 Apolipoprotein O DUF1514 PF07438.11 gi|73667854|ref|YP_303869.1| - 0.082 12.8 0.1 0.17 11.7 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1514) Cas_CXXC_CXXC PF09706.10 gi|73667855|ref|YP_303870.1| - 1.1e-18 67.2 0.2 4.5e-18 65.2 0.2 2.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_CXXC_CXXC) DUF3885 PF13021.6 gi|73667855|ref|YP_303870.1| - 0.26 11.4 2.2 0.39 10.9 0.3 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF3885) DevR PF01905.16 gi|73667856|ref|YP_303871.1| - 1.3e-15 57.2 0.0 2.2e-14 53.2 0.0 2.3 1 1 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 Rubrerythrin PF02915.17 gi|73667856|ref|YP_303871.1| - 0.15 12.5 0.1 0.31 11.4 0.1 1.5 1 0 0 1 1 1 0 Rubrerythrin Cas_Cas5d PF09704.10 gi|73667857|ref|YP_303872.1| - 4.2e-05 23.5 0.5 0.00041 20.3 0.5 2.0 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DEAD PF00270.29 gi|73667858|ref|YP_303873.1| - 3.7e-14 52.9 0.1 5.3e-12 45.9 0.0 2.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|73667858|ref|YP_303873.1| - 2.4e-09 37.5 1.0 6.6e-09 36.1 0.1 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|73667858|ref|YP_303873.1| - 3.4e-08 33.7 3.9 2.2e-07 31.1 0.1 2.8 2 1 1 3 3 3 1 Type III restriction enzyme, res subunit HD_6 PF18019.1 gi|73667858|ref|YP_303873.1| - 6.9e-06 26.3 0.0 1.3e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 HD domain AAA_22 PF13401.6 gi|73667858|ref|YP_303873.1| - 0.0021 18.4 0.0 0.018 15.3 0.0 2.4 1 1 0 1 1 1 1 AAA domain HD PF01966.22 gi|73667858|ref|YP_303873.1| - 0.0023 18.2 0.1 0.0071 16.6 0.1 1.9 1 0 0 1 1 1 1 HD domain DUF919 PF06034.11 gi|73667858|ref|YP_303873.1| - 0.0024 17.7 1.4 0.0087 15.9 1.4 2.0 1 0 0 1 1 1 1 Nucleopolyhedrovirus protein of unknown function (DUF919) DUF1330 PF07045.11 gi|73667859|ref|YP_303874.1| - 1.6e-21 76.4 0.0 1.9e-21 76.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1330) Acetyltransf_3 PF13302.7 gi|73667860|ref|YP_303875.1| - 2.6e-22 80.0 0.0 3e-22 79.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|73667860|ref|YP_303875.1| - 9.5e-11 42.1 0.0 1.2e-10 41.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73667860|ref|YP_303875.1| - 8.4e-07 29.2 0.0 1.1e-06 28.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 gi|73667860|ref|YP_303875.1| - 0.013 15.2 0.0 0.018 14.8 0.0 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain VAPB_antitox PF02697.14 gi|73667861|ref|YP_303876.1| - 4.7e-06 27.3 1.5 7.3e-06 26.7 1.5 1.4 1 0 0 1 1 1 1 Putative antitoxin Fic PF02661.18 gi|73667862|ref|YP_303877.1| - 1.9e-10 41.5 0.3 5.1e-10 40.1 0.1 1.9 2 1 0 2 2 2 1 Fic/DOC family Methyltransf_11 PF08241.12 gi|73667863|ref|YP_303878.1| - 1.2e-20 74.0 0.0 2e-20 73.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73667863|ref|YP_303878.1| - 1.2e-18 67.4 0.0 1.6e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73667863|ref|YP_303878.1| - 9.3e-18 64.7 0.0 1.8e-17 63.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73667863|ref|YP_303878.1| - 2.5e-13 50.2 0.0 3.1e-13 49.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73667863|ref|YP_303878.1| - 1.7e-09 37.3 0.0 6.7e-09 35.4 0.0 1.8 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|73667863|ref|YP_303878.1| - 2.4e-08 34.6 0.0 4.3e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|73667863|ref|YP_303878.1| - 4.3e-06 26.3 0.0 0.00079 18.9 0.0 2.8 3 0 0 3 3 3 1 Putative methyltransferase Methyltransf_9 PF08003.11 gi|73667863|ref|YP_303878.1| - 1e-05 24.6 0.0 1.4e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) CMAS PF02353.20 gi|73667863|ref|YP_303878.1| - 0.00028 20.3 0.0 0.00042 19.7 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase DOT1 PF08123.13 gi|73667863|ref|YP_303878.1| - 0.00059 19.4 0.0 0.0022 17.5 0.0 1.8 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_8 PF05148.15 gi|73667863|ref|YP_303878.1| - 0.00082 19.3 0.0 0.088 12.6 0.0 2.1 2 0 0 2 2 2 1 Hypothetical methyltransferase GCD14 PF08704.10 gi|73667863|ref|YP_303878.1| - 0.0015 18.2 0.0 0.0032 17.2 0.0 1.5 2 0 0 2 2 2 1 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 gi|73667863|ref|YP_303878.1| - 0.0018 18.0 0.0 0.0036 17.1 0.0 1.5 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Fibrillarin PF01269.17 gi|73667863|ref|YP_303878.1| - 0.0029 16.8 0.0 0.0048 16.0 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin MetW PF07021.12 gi|73667863|ref|YP_303878.1| - 0.0029 17.2 0.0 0.0049 16.5 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_16 PF10294.9 gi|73667863|ref|YP_303878.1| - 0.0045 16.7 0.0 0.0061 16.3 0.0 1.2 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_2 PF00891.18 gi|73667863|ref|YP_303878.1| - 0.0062 15.9 0.0 0.01 15.1 0.0 1.4 1 1 0 1 1 1 1 O-methyltransferase domain TehB PF03848.14 gi|73667863|ref|YP_303878.1| - 0.0079 15.6 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB AdoMet_MTase PF07757.13 gi|73667863|ref|YP_303878.1| - 0.015 15.6 0.0 0.027 14.8 0.0 1.4 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase MTS PF05175.14 gi|73667863|ref|YP_303878.1| - 0.031 13.8 0.0 0.087 12.4 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase small domain Methyltransf_32 PF13679.6 gi|73667863|ref|YP_303878.1| - 0.055 13.5 0.0 0.057 13.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_17 PF12692.7 gi|73667863|ref|YP_303878.1| - 0.085 12.8 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase UbiA PF01040.18 gi|73667864|ref|YP_303879.1| - 7.1e-40 136.9 15.4 7.1e-40 136.9 15.4 1.4 1 1 0 1 1 1 1 UbiA prenyltransferase family Nitroreductase PF00881.24 gi|73667865|ref|YP_303880.1| - 2.2e-10 40.8 0.0 0.0042 17.2 0.0 4.0 4 0 0 4 4 4 3 Nitroreductase family TM1586_NiRdase PF14512.6 gi|73667865|ref|YP_303880.1| - 3.9e-06 26.6 0.0 0.0001 22.0 0.0 2.6 3 0 0 3 3 3 1 Putative TM nitroreductase Cupin_2 PF07883.11 gi|73667866|ref|YP_303881.1| - 1.1e-17 63.5 0.1 1.5e-17 63.1 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|73667866|ref|YP_303881.1| - 0.00043 20.2 0.0 0.00068 19.5 0.0 1.3 1 1 0 1 1 1 1 AraC-like ligand binding domain CENP-C_C PF11699.8 gi|73667866|ref|YP_303881.1| - 0.0012 19.0 0.0 0.0015 18.7 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like MannoseP_isomer PF01050.18 gi|73667866|ref|YP_303881.1| - 0.0013 18.7 0.1 0.0015 18.5 0.1 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_3 PF05899.12 gi|73667866|ref|YP_303881.1| - 0.0025 17.5 0.0 0.004 16.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 gi|73667866|ref|YP_303881.1| - 0.066 12.8 0.0 0.07 12.7 0.0 1.2 1 0 0 1 1 1 0 Cupin Cupin_6 PF12852.7 gi|73667866|ref|YP_303881.1| - 0.18 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Cupin OrfB_IS605 PF01385.19 gi|73667868|ref|YP_303883.1| - 5.5e-29 100.8 1.4 1e-28 100.0 1.4 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73667868|ref|YP_303883.1| - 4.8e-21 74.5 0.1 1.1e-20 73.3 0.1 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zf-piccolo PF05715.13 gi|73667868|ref|YP_303883.1| - 0.012 15.8 0.4 0.029 14.5 0.4 1.6 1 0 0 1 1 1 0 Piccolo Zn-finger Med18 PF09637.10 gi|73667868|ref|YP_303883.1| - 0.034 14.0 0.3 0.21 11.4 0.1 1.9 2 0 0 2 2 2 0 Med18 protein zf-RanBP PF00641.18 gi|73667868|ref|YP_303883.1| - 0.85 9.0 6.1 7.6 6.0 1.3 2.8 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others MRNIP PF15749.5 gi|73667868|ref|YP_303883.1| - 1.1 9.9 6.2 1.1 10.0 0.1 2.4 2 0 0 2 2 2 0 MRN-interacting protein zinc_ribbon_2 PF13240.6 gi|73667868|ref|YP_303883.1| - 4.8 7.0 5.5 16 5.4 0.2 2.9 3 0 0 3 3 3 0 zinc-ribbon domain Enterotoxin_ST PF02048.16 gi|73667869|ref|YP_303884.1| - 0.00073 19.9 1.5 0.0012 19.3 1.5 1.4 1 0 0 1 1 1 1 Heat-stable enterotoxin ST zinc_ribbon_4 PF13717.6 gi|73667869|ref|YP_303884.1| - 0.03 14.2 0.0 0.07 13.1 0.0 1.7 1 0 0 1 1 1 0 zinc-ribbon domain zf_C2H2_13 PF18508.1 gi|73667869|ref|YP_303884.1| - 0.053 13.1 1.0 0.058 13.0 0.1 1.5 2 0 0 2 2 2 0 Zinc finger domain TFIIS_C PF01096.18 gi|73667869|ref|YP_303884.1| - 0.055 13.3 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 Transcription factor S-II (TFIIS) Nudix_N_2 PF14803.6 gi|73667869|ref|YP_303884.1| - 0.088 12.7 1.3 0.19 11.7 1.3 1.6 1 0 0 1 1 1 0 Nudix N-terminal AA_permease_2 PF13520.6 gi|73667870|ref|YP_303885.1| - 8.3e-40 136.9 48.7 1.1e-39 136.5 48.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|73667870|ref|YP_303885.1| - 1.5e-38 132.7 43.1 2.4e-38 132.0 43.1 1.2 1 0 0 1 1 1 1 Amino acid permease Usp PF00582.26 gi|73667870|ref|YP_303885.1| - 8.1e-18 65.3 0.0 1.3e-08 35.5 0.0 3.1 2 1 0 2 2 2 2 Universal stress protein family Spore_permease PF03845.13 gi|73667870|ref|YP_303885.1| - 3e-11 42.7 17.0 3e-11 42.7 17.0 2.4 3 0 0 3 3 3 1 Spore germination protein ChaB PF06150.12 gi|73667872|ref|YP_303887.1| - 1.4e-10 41.6 0.0 1.6e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 ChaB M64_N PF16217.5 gi|73667872|ref|YP_303887.1| - 0.045 13.3 0.1 0.045 13.3 0.1 1.1 1 0 0 1 1 1 0 Peptidase M64 N-terminus Transglut_core PF01841.19 gi|73667873|ref|YP_303888.1| - 1.9e-10 41.2 0.2 1.3e-09 38.5 0.0 2.0 1 1 1 2 2 2 1 Transglutaminase-like superfamily DUF553 PF04473.12 gi|73667873|ref|YP_303888.1| - 0.0049 16.4 5.5 0.029 13.9 0.8 2.8 1 1 1 2 2 2 1 Transglutaminase-like domain Peptidase_C71 PF12386.8 gi|73667873|ref|YP_303888.1| - 0.013 15.1 2.2 0.024 14.3 2.2 1.4 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei Peptidase_C93 PF06035.11 gi|73667873|ref|YP_303888.1| - 0.07 12.9 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP DUF2892 PF11127.8 gi|73667874|ref|YP_303889.1| - 0.00068 19.6 0.1 0.001 19.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Gas_vesicle PF00741.18 gi|73667875|ref|YP_303890.1| - 5.2e-15 55.3 5.7 6.9e-15 54.9 5.7 1.2 1 0 0 1 1 1 1 Gas vesicle protein Gas_vesicle PF00741.18 gi|73667876|ref|YP_303891.1| - 5.2e-15 55.3 5.7 6.9e-15 54.9 5.7 1.2 1 0 0 1 1 1 1 Gas vesicle protein Gas_vesicle PF00741.18 gi|73667877|ref|YP_303892.1| - 5.2e-15 55.3 5.7 6.9e-15 54.9 5.7 1.2 1 0 0 1 1 1 1 Gas vesicle protein FAM184 PF15665.5 gi|73667878|ref|YP_303893.1| - 0.00016 21.5 4.1 0.0002 21.2 4.1 1.1 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B Spc7 PF08317.11 gi|73667878|ref|YP_303893.1| - 0.00054 18.9 7.5 0.00065 18.7 7.5 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein Cob_adeno_trans PF01923.18 gi|73667878|ref|YP_303893.1| - 0.009 16.2 1.1 0.01 16.0 1.1 1.1 1 0 0 1 1 1 1 Cobalamin adenosyltransferase CENP-F_leu_zip PF10473.9 gi|73667878|ref|YP_303893.1| - 0.01 15.8 6.4 0.021 14.9 1.2 2.1 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HMMR_N PF15905.5 gi|73667878|ref|YP_303893.1| - 0.012 15.2 7.6 0.012 15.1 7.6 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal HAP1_N PF04849.13 gi|73667878|ref|YP_303893.1| - 0.012 14.8 5.2 0.014 14.6 5.2 1.1 1 0 0 1 1 1 0 HAP1 N-terminal conserved region DUF1664 PF07889.12 gi|73667878|ref|YP_303893.1| - 0.019 15.0 5.5 0.055 13.5 5.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Cluap1 PF10234.9 gi|73667878|ref|YP_303893.1| - 0.019 14.3 3.8 0.025 14.0 3.8 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 TPR_MLP1_2 PF07926.12 gi|73667878|ref|YP_303893.1| - 0.02 15.0 2.9 0.036 14.1 2.8 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein GIT1_C PF12205.8 gi|73667878|ref|YP_303893.1| - 0.023 14.8 1.5 0.73 10.0 0.6 2.1 1 1 1 2 2 2 0 G protein-coupled receptor kinase-interacting protein 1 C term Baculo_PEP_C PF04513.12 gi|73667878|ref|YP_303893.1| - 0.023 14.7 0.8 0.034 14.2 0.8 1.3 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus FliD_N PF02465.18 gi|73667878|ref|YP_303893.1| - 0.024 15.3 2.2 3.4 8.4 0.3 2.2 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Phage_Mu_Gam PF07352.12 gi|73667878|ref|YP_303893.1| - 0.026 14.5 2.8 0.026 14.5 2.8 1.9 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein Golgin_A5 PF09787.9 gi|73667878|ref|YP_303893.1| - 0.027 14.0 6.1 0.034 13.6 6.1 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 Prefoldin_2 PF01920.20 gi|73667878|ref|YP_303893.1| - 0.029 14.3 5.6 0.043 13.8 5.6 1.4 1 1 0 1 1 1 0 Prefoldin subunit UPF0242 PF06785.11 gi|73667878|ref|YP_303893.1| - 0.044 13.9 6.5 0.051 13.7 6.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5082 PF16888.5 gi|73667878|ref|YP_303893.1| - 0.06 13.6 7.3 0.06 13.6 2.5 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) Leu_zip PF15294.6 gi|73667878|ref|YP_303893.1| - 0.064 12.8 4.6 0.072 12.6 4.6 1.0 1 0 0 1 1 1 0 Leucine zipper AAA_13 PF13166.6 gi|73667878|ref|YP_303893.1| - 0.066 11.8 5.4 0.073 11.7 5.4 1.0 1 0 0 1 1 1 0 AAA domain CENP-H PF05837.12 gi|73667878|ref|YP_303893.1| - 0.075 13.4 3.2 0.097 13.1 3.2 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Prominin PF05478.11 gi|73667878|ref|YP_303893.1| - 0.086 10.8 3.3 0.1 10.5 3.3 1.1 1 0 0 1 1 1 0 Prominin DUF4618 PF15397.6 gi|73667878|ref|YP_303893.1| - 0.1 12.0 6.7 0.74 9.2 6.7 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Lebercilin PF15619.6 gi|73667878|ref|YP_303893.1| - 0.12 12.0 5.2 0.39 10.3 5.2 1.7 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease HAUS6_N PF14661.6 gi|73667878|ref|YP_303893.1| - 0.13 11.8 2.0 0.16 11.5 2.0 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus WXG100 PF06013.12 gi|73667878|ref|YP_303893.1| - 0.14 12.4 2.3 7.7 6.8 1.4 2.7 1 1 1 2 2 2 0 Proteins of 100 residues with WXG TSC22 PF01166.18 gi|73667878|ref|YP_303893.1| - 0.16 12.3 1.5 1.1 9.6 0.1 2.5 2 1 0 2 2 2 0 TSC-22/dip/bun family DUF1640 PF07798.11 gi|73667878|ref|YP_303893.1| - 0.16 12.0 5.4 0.38 10.8 5.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) SPATA1_C PF15743.5 gi|73667878|ref|YP_303893.1| - 0.17 11.9 6.1 0.36 10.9 5.5 1.6 1 1 0 1 1 1 0 Spermatogenesis-associated C-terminus BLOC1_2 PF10046.9 gi|73667878|ref|YP_303893.1| - 0.2 12.0 5.0 1 9.7 2.5 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF5595 PF18077.1 gi|73667878|ref|YP_303893.1| - 0.24 11.5 3.7 0.5 10.5 3.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5595) DUF1515 PF07439.11 gi|73667878|ref|YP_303893.1| - 0.3 11.1 2.0 0.94 9.5 1.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) bZIP_1 PF00170.21 gi|73667878|ref|YP_303893.1| - 0.37 10.9 4.1 0.79 9.9 0.7 2.4 1 1 2 3 3 3 0 bZIP transcription factor DivIC PF04977.15 gi|73667878|ref|YP_303893.1| - 0.37 10.6 5.7 0.16 11.8 1.2 2.2 1 1 1 2 2 2 0 Septum formation initiator DUF1319 PF07028.11 gi|73667878|ref|YP_303893.1| - 0.44 10.8 4.1 5 7.4 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1319) DUF16 PF01519.16 gi|73667878|ref|YP_303893.1| - 0.5 10.9 7.6 29 5.2 7.6 2.1 1 1 0 1 1 1 0 Protein of unknown function DUF16 HU-CCDC81_bac_2 PF18175.1 gi|73667878|ref|YP_303893.1| - 0.53 10.2 4.1 3.2 7.7 0.3 2.9 1 1 2 3 3 3 0 CCDC81-like prokaryotic HU domain 2 FlaC_arch PF05377.11 gi|73667878|ref|YP_303893.1| - 1.2 9.6 8.8 10 6.6 0.3 3.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) bZIP_2 PF07716.15 gi|73667878|ref|YP_303893.1| - 1.4 9.1 4.2 0.84 9.8 0.6 2.3 2 1 0 2 2 2 0 Basic region leucine zipper ACCA PF03255.14 gi|73667878|ref|YP_303893.1| - 1.4 8.7 7.0 1.7 8.5 1.1 2.0 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF3573 PF12097.8 gi|73667878|ref|YP_303893.1| - 2.1 7.1 5.0 5.9 5.6 5.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3573) AAA_5 PF07728.14 gi|73667879|ref|YP_303894.1| - 6.9e-15 55.3 0.0 1.1e-13 51.3 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|73667879|ref|YP_303894.1| - 6.9e-07 29.8 0.1 3.2e-06 27.6 0.0 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|73667879|ref|YP_303894.1| - 0.00053 20.4 0.0 0.0052 17.2 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain Sigma54_activ_2 PF14532.6 gi|73667879|ref|YP_303894.1| - 0.00073 19.7 0.0 0.0015 18.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_7 PF12775.7 gi|73667879|ref|YP_303894.1| - 0.00079 19.0 0.0 0.0014 18.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region IPT PF01745.16 gi|73667879|ref|YP_303894.1| - 0.0016 17.9 0.0 0.0028 17.1 0.0 1.4 1 0 0 1 1 1 1 Isopentenyl transferase AAA_25 PF13481.6 gi|73667879|ref|YP_303894.1| - 0.0018 17.9 0.0 0.0043 16.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|73667879|ref|YP_303894.1| - 0.0036 17.8 1.3 0.0068 16.9 0.0 2.1 2 1 0 2 2 2 1 ABC transporter Zeta_toxin PF06414.12 gi|73667879|ref|YP_303894.1| - 0.0049 16.2 0.1 0.039 13.2 0.0 2.4 3 0 0 3 3 3 1 Zeta toxin IstB_IS21 PF01695.17 gi|73667879|ref|YP_303894.1| - 0.0055 16.5 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_3 PF07726.11 gi|73667879|ref|YP_303894.1| - 0.0059 16.5 0.0 0.22 11.4 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|73667879|ref|YP_303894.1| - 0.0062 16.3 0.0 0.017 14.9 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 gi|73667879|ref|YP_303894.1| - 0.0063 16.7 0.0 0.037 14.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|73667879|ref|YP_303894.1| - 0.0085 16.6 0.1 0.025 15.1 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_6 PF12774.7 gi|73667879|ref|YP_303894.1| - 0.015 14.3 0.1 0.054 12.5 0.0 1.8 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region TIP49 PF06068.13 gi|73667879|ref|YP_303894.1| - 0.015 14.5 0.0 0.015 14.5 0.0 2.3 2 1 1 3 3 3 0 TIP49 P-loop domain Sigma54_activat PF00158.26 gi|73667879|ref|YP_303894.1| - 0.02 14.6 0.0 0.076 12.7 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|73667879|ref|YP_303894.1| - 0.025 15.0 0.1 0.095 13.1 0.0 2.0 2 0 0 2 2 2 0 RNA helicase NACHT PF05729.12 gi|73667879|ref|YP_303894.1| - 0.03 14.2 0.0 0.069 13.1 0.0 1.6 1 0 0 1 1 1 0 NACHT domain TsaE PF02367.17 gi|73667879|ref|YP_303894.1| - 0.032 14.2 0.0 0.091 12.8 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_22 PF13401.6 gi|73667879|ref|YP_303894.1| - 0.034 14.4 0.0 0.087 13.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|73667879|ref|YP_303894.1| - 0.044 13.8 0.1 0.28 11.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain ResIII PF04851.15 gi|73667879|ref|YP_303894.1| - 0.069 13.2 1.9 1.7 8.6 0.0 3.0 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_28 PF13521.6 gi|73667879|ref|YP_303894.1| - 0.071 13.4 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain FAM220 PF15487.6 gi|73667879|ref|YP_303894.1| - 0.42 10.2 6.1 0.76 9.3 6.1 1.4 1 0 0 1 1 1 0 FAM220 family ALMT PF11744.8 gi|73667879|ref|YP_303894.1| - 7 5.4 10.0 11 4.7 10.0 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter GvpO PF05800.11 gi|73667880|ref|YP_303895.1| - 3.4e-15 55.8 0.1 4e-15 55.6 0.1 1.1 1 0 0 1 1 1 1 Gas vesicle synthesis protein GvpO ArsR PF09824.9 gi|73667880|ref|YP_303895.1| - 0.03 13.9 0.4 0.051 13.2 0.4 1.4 1 0 0 1 1 1 0 ArsR transcriptional regulator GvpL_GvpF PF06386.11 gi|73667881|ref|YP_303896.1| - 1.8e-37 129.6 0.0 2.1e-20 73.7 0.0 2.0 1 1 1 2 2 2 2 Gas vesicle synthesis protein GvpL/GvpF SHOCT PF09851.9 gi|73667882|ref|YP_303897.1| - 0.023 14.4 1.0 0.023 14.4 1.0 1.8 2 0 0 2 2 2 0 Short C-terminal domain GvpG PF05120.12 gi|73667882|ref|YP_303897.1| - 0.11 12.5 1.2 0.12 12.3 1.2 1.1 1 0 0 1 1 1 0 Gas vesicle protein G HTH_ParB PF17762.1 gi|73667882|ref|YP_303897.1| - 0.13 12.1 0.3 0.25 11.2 0.0 1.6 2 0 0 2 2 2 0 HTH domain found in ParB protein Gas_vesicle PF00741.18 gi|73667884|ref|YP_303899.1| - 9.7e-15 54.4 4.9 1.3e-14 54.0 4.9 1.2 1 0 0 1 1 1 1 Gas vesicle protein RecR PF02132.15 gi|73667884|ref|YP_303899.1| - 0.0068 15.9 0.2 0.011 15.2 0.2 1.4 1 0 0 1 1 1 1 RecR protein DZR PF12773.7 gi|73667884|ref|YP_303899.1| - 0.013 15.6 0.3 0.02 14.9 0.3 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|73667884|ref|YP_303899.1| - 0.014 14.8 3.3 1.6 8.2 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF3797 PF12677.7 gi|73667884|ref|YP_303899.1| - 0.014 15.3 2.0 0.014 15.3 2.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) DUF2072 PF09845.9 gi|73667884|ref|YP_303899.1| - 0.025 14.8 0.1 0.039 14.2 0.1 1.4 1 0 0 1 1 1 0 Zn-ribbon containing protein TF_Zn_Ribbon PF08271.12 gi|73667884|ref|YP_303899.1| - 0.087 12.4 0.5 4.9 6.8 0.1 2.6 2 0 0 2 2 2 0 TFIIB zinc-binding HypA PF01155.19 gi|73667884|ref|YP_303899.1| - 0.13 12.3 0.2 0.15 12.1 0.2 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_ligase_ZBD PF03119.16 gi|73667884|ref|YP_303899.1| - 2.3 8.3 5.2 12 6.0 0.1 2.8 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain ArsA_HSP20 PF17886.1 gi|73667885|ref|YP_303900.1| - 1.1e-08 34.4 0.0 1.8e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA Tropomyosin_1 PF12718.7 gi|73667885|ref|YP_303900.1| - 0.0011 19.1 2.4 0.0019 18.3 2.4 1.4 1 0 0 1 1 1 1 Tropomyosin like HSP20 PF00011.21 gi|73667885|ref|YP_303900.1| - 0.0025 18.0 4.1 0.54 10.4 0.0 2.9 2 1 1 3 3 3 2 Hsp20/alpha crystallin family DUF4407 PF14362.6 gi|73667885|ref|YP_303900.1| - 0.01 15.2 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PKcGMP_CC PF16808.5 gi|73667885|ref|YP_303900.1| - 0.11 12.4 0.2 0.11 12.4 0.2 2.5 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase CS PF04969.16 gi|73667885|ref|YP_303900.1| - 0.23 12.5 2.6 0.27 12.3 0.2 2.2 2 0 0 2 2 2 0 CS domain Ax_dynein_light PF10211.9 gi|73667885|ref|YP_303900.1| - 0.69 9.8 5.8 1.4 8.9 5.8 1.5 1 0 0 1 1 1 0 Axonemal dynein light chain XhlA PF10779.9 gi|73667885|ref|YP_303900.1| - 3.1 8.1 7.6 1.8 8.8 5.2 1.9 2 0 0 2 2 2 0 Haemolysin XhlA GvpK PF05121.12 gi|73667886|ref|YP_303901.1| - 5.5e-18 64.8 6.1 9e-18 64.1 6.1 1.4 1 0 0 1 1 1 1 Gas vesicle protein K Sec3_C PF09763.9 gi|73667886|ref|YP_303901.1| - 0.047 12.1 0.4 0.051 12.0 0.4 1.1 1 0 0 1 1 1 0 Exocyst complex component Sec3 Ago_PAZ PF18309.1 gi|73667886|ref|YP_303901.1| - 0.051 14.2 0.0 0.076 13.7 0.0 1.2 1 0 0 1 1 1 0 Argonaute PAZ domain PEP-utilisers_N PF05524.13 gi|73667886|ref|YP_303901.1| - 0.083 13.1 0.4 0.14 12.4 0.4 1.5 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal DUF4175 PF13779.6 gi|73667886|ref|YP_303901.1| - 0.14 10.1 1.7 0.15 10.0 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) Rx_N PF18052.1 gi|73667886|ref|YP_303901.1| - 0.25 11.6 3.9 0.39 11.0 3.9 1.4 1 0 0 1 1 1 0 Rx N-terminal domain TSC22 PF01166.18 gi|73667886|ref|YP_303901.1| - 0.48 10.8 6.7 6.8 7.1 0.7 2.4 1 1 1 2 2 2 0 TSC-22/dip/bun family GvpL_GvpF PF06386.11 gi|73667887|ref|YP_303902.1| - 1.6e-57 195.2 0.0 1.8e-57 195.1 0.0 1.0 1 0 0 1 1 1 1 Gas vesicle synthesis protein GvpL/GvpF Gas_vesicle PF00741.18 gi|73667888|ref|YP_303903.1| - 2.3e-14 53.2 5.6 3.8e-14 52.5 5.6 1.4 1 0 0 1 1 1 1 Gas vesicle protein BNR_2 PF13088.6 gi|73667888|ref|YP_303903.1| - 0.054 12.8 0.0 0.1 11.9 0.0 1.3 1 1 0 1 1 1 0 BNR repeat-like domain PadR PF03551.14 gi|73667889|ref|YP_303904.1| - 3.4e-09 36.6 0.0 5.3e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family TraB PF01963.17 gi|73667890|ref|YP_303905.1| - 0.022 14.7 0.1 0.029 14.3 0.1 1.6 1 1 0 1 1 1 0 TraB family DUF2267 PF10025.9 gi|73667891|ref|YP_303906.1| - 7.4e-29 100.5 0.0 8.4e-29 100.3 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2267) E1-E2_ATPase PF00122.20 gi|73667892|ref|YP_303907.1| - 5.4e-49 166.2 0.7 5.4e-49 166.2 0.7 2.6 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 gi|73667892|ref|YP_303907.1| - 3.7e-43 148.3 1.1 3.7e-43 148.3 1.1 1.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|73667892|ref|YP_303907.1| - 1.2e-06 28.5 0.2 0.0094 15.7 0.0 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|73667892|ref|YP_303907.1| - 4.5e-05 23.9 0.0 0.00041 20.8 0.0 2.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|73667892|ref|YP_303907.1| - 0.013 15.6 0.4 0.035 14.2 0.4 1.7 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF1056 PF06341.11 gi|73667892|ref|YP_303907.1| - 1.4 9.3 5.0 0.96 9.8 0.3 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1056) CbiX PF01903.17 gi|73667893|ref|YP_303908.1| - 4.7e-28 97.6 0.0 5.4e-28 97.4 0.0 1.0 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|73667893|ref|YP_303908.1| - 5.1e-07 29.3 0.0 6.1e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|73667893|ref|YP_303908.1| - 0.086 11.9 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Ferrochelatase Mur_ligase_M PF08245.12 gi|73667894|ref|YP_303909.1| - 1.4e-06 28.4 0.3 5.9e-06 26.4 0.3 2.0 1 1 0 1 1 1 1 Mur ligase middle domain Oxidored_nitro PF00148.19 gi|73667895|ref|YP_303910.1| - 3.7e-19 68.7 0.1 4.9e-19 68.3 0.1 1.3 1 1 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase GvpG PF05120.12 gi|73667895|ref|YP_303910.1| - 0.011 15.7 0.1 0.018 15.0 0.1 1.3 1 0 0 1 1 1 0 Gas vesicle protein G SHOCT PF09851.9 gi|73667895|ref|YP_303910.1| - 0.044 13.5 0.2 0.092 12.5 0.2 1.6 1 0 0 1 1 1 0 Short C-terminal domain Fer4_NifH PF00142.18 gi|73667896|ref|YP_303911.1| - 2.9e-90 302.4 1.8 3.4e-90 302.2 1.8 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|73667896|ref|YP_303911.1| - 8.5e-11 42.0 0.0 1.4e-10 41.3 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|73667896|ref|YP_303911.1| - 6e-10 39.0 0.8 4e-09 36.3 0.8 2.1 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|73667896|ref|YP_303911.1| - 9.9e-10 38.6 0.4 2.4e-09 37.4 0.1 1.7 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|73667896|ref|YP_303911.1| - 9.3e-09 34.9 1.1 2.2e-07 30.4 0.6 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_24 PF13479.6 gi|73667896|ref|YP_303911.1| - 3.2e-05 23.7 0.0 5.8e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain MipZ PF09140.11 gi|73667896|ref|YP_303911.1| - 0.00016 21.1 0.1 0.0049 16.2 0.0 2.3 3 0 0 3 3 3 1 ATPase MipZ MeaB PF03308.16 gi|73667896|ref|YP_303911.1| - 0.00022 20.3 0.1 0.00034 19.7 0.1 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|73667896|ref|YP_303911.1| - 0.0034 17.0 0.2 0.0062 16.2 0.2 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_22 PF13401.6 gi|73667896|ref|YP_303911.1| - 0.016 15.4 0.1 0.069 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|73667896|ref|YP_303911.1| - 0.023 14.3 0.0 0.039 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|73667896|ref|YP_303911.1| - 0.029 14.8 0.0 0.049 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain ATPase PF06745.13 gi|73667896|ref|YP_303911.1| - 0.052 12.9 0.1 1.8 7.9 0.0 2.1 2 0 0 2 2 2 0 KaiC NB-ARC PF00931.22 gi|73667896|ref|YP_303911.1| - 0.058 12.6 0.2 0.098 11.8 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain ATP_bind_1 PF03029.17 gi|73667896|ref|YP_303911.1| - 0.075 12.8 0.3 3.7 7.2 0.2 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 gi|73667896|ref|YP_303911.1| - 0.17 12.2 0.0 0.57 10.6 0.0 1.9 2 0 0 2 2 2 0 RNA helicase IstB_IS21 PF01695.17 gi|73667896|ref|YP_303911.1| - 0.23 11.2 0.4 0.36 10.5 0.4 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein GATase_3 PF07685.14 gi|73667897|ref|YP_303912.1| - 3e-44 151.0 0.1 4.9e-44 150.3 0.1 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|73667897|ref|YP_303912.1| - 1.4e-19 70.7 0.0 1.5e-17 64.1 0.1 2.5 2 1 0 2 2 2 1 AAA domain CbiA PF01656.23 gi|73667897|ref|YP_303912.1| - 2.9e-17 62.9 0.0 5.7e-17 62.0 0.0 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MobB PF03205.14 gi|73667897|ref|YP_303912.1| - 0.031 14.2 0.0 0.081 12.8 0.0 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B MipZ PF09140.11 gi|73667897|ref|YP_303912.1| - 0.12 11.6 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ tRNA_int_endo PF01974.17 gi|73667898|ref|YP_303913.1| - 3.8e-46 155.1 2.6 1.5e-24 85.8 0.4 2.3 2 0 0 2 2 2 2 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|73667898|ref|YP_303913.1| - 2.3e-43 145.7 2.6 1.6e-22 78.9 0.0 2.7 2 0 0 2 2 2 2 tRNA intron endonuclease, N-terminal domain tRNA_int_end_N2 PF12928.7 gi|73667898|ref|YP_303913.1| - 0.0025 18.0 0.2 0.72 10.1 0.1 2.6 2 0 0 2 2 2 2 tRNA-splicing endonuclease subunit sen54 N-term DUF2209 PF09974.9 gi|73667899|ref|YP_303914.1| - 6.3e-51 171.8 0.1 7.1e-51 171.6 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2209) GTP-bdg_N PF13167.6 gi|73667900|ref|YP_303915.1| - 3.8e-23 82.0 0.0 8.4e-23 80.9 0.0 1.6 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal MMR_HSR1 PF01926.23 gi|73667900|ref|YP_303915.1| - 1e-19 70.7 0.0 2.4e-19 69.5 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|73667900|ref|YP_303915.1| - 2e-13 50.7 4.6 2.1e-13 50.7 3.1 1.8 2 0 0 2 2 2 1 GTP-binding GTPase Middle Region RsgA_GTPase PF03193.16 gi|73667900|ref|YP_303915.1| - 9.7e-09 35.3 0.1 0.0011 18.9 0.0 2.6 3 0 0 3 3 3 2 RsgA GTPase MMR_HSR1_Xtn PF16897.5 gi|73667900|ref|YP_303915.1| - 2.6e-07 30.6 0.0 5.1e-07 29.7 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain GTP_EFTU PF00009.27 gi|73667900|ref|YP_303915.1| - 4.3e-07 29.7 0.0 0.00011 21.8 0.0 2.8 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 gi|73667900|ref|YP_303915.1| - 6.7e-06 25.7 0.1 2.1e-05 24.1 0.1 1.8 1 1 0 1 1 1 1 Ferrous iron transport protein B cobW PF02492.19 gi|73667900|ref|YP_303915.1| - 0.00084 19.0 0.9 0.067 12.8 0.1 2.6 2 1 1 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain MnmE_helical PF12631.7 gi|73667900|ref|YP_303915.1| - 0.015 15.5 0.0 0.025 14.8 0.0 1.3 1 0 0 1 1 1 0 MnmE helical domain Dynamin_N PF00350.23 gi|73667900|ref|YP_303915.1| - 0.016 15.3 0.1 0.1 12.6 0.0 2.2 1 1 1 2 2 2 0 Dynamin family NOG1 PF06858.14 gi|73667900|ref|YP_303915.1| - 0.02 14.7 0.1 0.067 13.0 0.1 1.9 1 0 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) Arf PF00025.21 gi|73667900|ref|YP_303915.1| - 0.039 13.4 0.2 0.21 11.0 0.2 2.2 1 1 0 1 1 1 0 ADP-ribosylation factor family BRO1 PF03097.18 gi|73667900|ref|YP_303915.1| - 0.072 11.9 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 BRO1-like domain Fzo_mitofusin PF04799.13 gi|73667900|ref|YP_303915.1| - 0.21 11.1 0.7 1.5 8.3 0.1 2.1 1 1 1 2 2 2 0 fzo-like conserved region AAA_23 PF13476.6 gi|73667900|ref|YP_303915.1| - 1.8 9.0 7.5 1.7 9.1 0.3 2.3 1 1 1 2 2 2 0 AAA domain PHP_C PF13263.6 gi|73667901|ref|YP_303916.1| - 5e-22 77.4 0.1 2.2e-21 75.3 0.1 2.0 2 0 0 2 2 2 1 PHP-associated PHP PF02811.19 gi|73667901|ref|YP_303916.1| - 1.2e-08 35.5 0.0 2.8e-07 31.0 0.0 2.3 2 1 0 2 2 2 1 PHP domain DJ-1_PfpI PF01965.24 gi|73667902|ref|YP_303917.1| - 5e-29 101.2 0.0 5.8e-29 101.0 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family RasGEF PF00617.19 gi|73667903|ref|YP_303918.1| - 0.096 12.9 0.3 0.21 11.8 0.3 1.6 1 1 0 1 1 1 0 RasGEF domain DUF4277 PF14104.6 gi|73667904|ref|YP_303919.1| - 2.8e-37 127.4 0.0 7e-37 126.1 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|73667904|ref|YP_303919.1| - 1.3e-12 47.8 0.5 1.5e-11 44.4 0.5 2.1 1 1 0 1 1 1 1 Transposase DDE domain ArgoMid PF16487.5 gi|73667904|ref|YP_303919.1| - 0.087 13.1 0.1 17 5.7 0.0 3.2 3 0 0 3 3 3 0 Mid domain of argonaute Yae1_N PF09811.9 gi|73667905|ref|YP_303920.1| - 0.0031 17.2 3.9 0.52 10.1 0.0 2.3 2 0 0 2 2 2 2 Essential protein Yae1, N terminal SnoaL_2 PF12680.7 gi|73667906|ref|YP_303921.1| - 6.7e-05 23.5 0.0 7.6e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|73667906|ref|YP_303921.1| - 0.00079 19.8 0.0 0.0009 19.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL PF07366.12 gi|73667906|ref|YP_303921.1| - 0.095 12.5 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase Metallophos PF00149.28 gi|73667908|ref|YP_303923.1| - 2e-12 48.0 0.0 4.6e-12 46.9 0.0 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|73667908|ref|YP_303923.1| - 5.1e-11 43.0 0.0 2.6e-06 27.7 0.0 2.3 2 0 0 2 2 2 2 Calcineurin-like phosphoesterase superfamily domain SMC_N PF02463.19 gi|73667909|ref|YP_303924.1| - 4.4e-11 42.7 33.9 2.8e-10 40.0 33.9 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73667909|ref|YP_303924.1| - 2.2e-08 34.3 3.9 0.00051 20.0 0.0 2.9 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|73667909|ref|YP_303924.1| - 4.8e-05 23.0 0.0 9.6e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|73667909|ref|YP_303924.1| - 0.0083 16.7 136.4 1.8e+04 -8.8 27.1 7.1 1 1 1 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|73667909|ref|YP_303924.1| - 0.047 13.6 0.8 0.3 11.0 0.1 2.7 2 0 0 2 2 2 0 RsgA GTPase AAA_16 PF13191.6 gi|73667909|ref|YP_303924.1| - 0.64 10.4 0.0 0.64 10.4 0.0 4.3 4 1 1 5 5 5 0 AAA ATPase domain AAA_15 PF13175.6 gi|73667909|ref|YP_303924.1| - 1.5 8.4 69.8 0.0077 16.0 31.1 4.7 1 1 2 3 3 3 0 AAA ATPase domain T4SS PF07996.11 gi|73667909|ref|YP_303924.1| - 2.5 8.4 39.6 0.13 12.7 3.0 4.7 4 0 0 4 4 4 0 Type IV secretion system proteins TPD PF14811.6 gi|73667910|ref|YP_303925.1| - 6.5e-48 162.1 0.1 1.1e-47 161.3 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif DUF1765 PF08578.10 gi|73667910|ref|YP_303925.1| - 0.13 12.8 1.3 0.57 10.7 0.2 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1765) SprA-related PF12118.8 gi|73667911|ref|YP_303926.1| - 0.19 10.8 1.9 0.25 10.4 0.4 1.7 1 1 1 2 2 2 0 SprA-related family Pribosyltran_N PF13793.6 gi|73667912|ref|YP_303927.1| - 4.3e-26 91.1 0.0 2.7e-24 85.3 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|73667912|ref|YP_303927.1| - 2.9e-17 62.6 0.1 5e-17 61.9 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|73667912|ref|YP_303927.1| - 2e-07 31.2 0.4 3e-07 30.6 0.4 1.2 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|73667912|ref|YP_303927.1| - 8.6e-07 28.6 0.1 1.6e-06 27.7 0.1 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|73667912|ref|YP_303927.1| - 0.002 17.7 0.0 0.0032 17.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase MoaC PF01967.21 gi|73667913|ref|YP_303928.1| - 1.4e-49 167.7 2.2 1.5e-49 167.5 2.2 1.0 1 0 0 1 1 1 1 MoaC family Carb_kinase PF01256.17 gi|73667915|ref|YP_303930.1| - 2.3e-51 174.6 0.2 3.2e-51 174.2 0.2 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|73667915|ref|YP_303930.1| - 5.1e-38 130.6 0.4 1.6e-37 129.0 0.1 1.9 2 0 0 2 2 2 1 YjeF-related protein N-terminus HK PF02110.15 gi|73667915|ref|YP_303930.1| - 2.3e-07 30.5 0.0 3.6e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family TrkA_N PF02254.18 gi|73667916|ref|YP_303931.1| - 6e-25 87.8 0.2 1.5e-24 86.4 0.2 1.8 1 0 0 1 1 1 1 TrkA-N domain DHHA1 PF02272.19 gi|73667916|ref|YP_303931.1| - 4.3e-15 56.3 0.7 1.8e-14 54.3 0.0 2.3 2 1 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|73667916|ref|YP_303931.1| - 4.7e-14 52.4 0.0 2.3e-13 50.3 0.0 2.0 2 0 0 2 2 2 1 DHH family F420_oxidored PF03807.17 gi|73667916|ref|YP_303931.1| - 0.0017 18.9 0.1 0.0042 17.6 0.1 1.9 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|73667916|ref|YP_303931.1| - 0.0017 18.0 0.0 0.0033 17.1 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 gi|73667916|ref|YP_303931.1| - 0.0018 18.5 0.1 0.0039 17.5 0.1 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 gi|73667916|ref|YP_303931.1| - 0.0018 18.7 0.1 0.0049 17.3 0.1 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|73667916|ref|YP_303931.1| - 0.0023 17.5 0.0 0.0046 16.6 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Epimerase PF01370.21 gi|73667916|ref|YP_303931.1| - 0.003 17.0 0.0 0.005 16.3 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_Gly3P_dh_N PF01210.23 gi|73667916|ref|YP_303931.1| - 0.0053 16.8 0.0 0.013 15.5 0.0 1.7 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PrpR_N PF06506.11 gi|73667916|ref|YP_303931.1| - 0.015 14.9 0.1 0.064 12.8 0.0 2.1 2 0 0 2 2 2 0 Propionate catabolism activator Shikimate_DH PF01488.20 gi|73667916|ref|YP_303931.1| - 0.016 15.3 0.0 0.041 13.9 0.0 1.7 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_2 PF03446.15 gi|73667916|ref|YP_303931.1| - 0.024 14.8 0.0 0.041 14.1 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase TyeA PF09059.10 gi|73667916|ref|YP_303931.1| - 0.03 14.4 0.0 0.071 13.2 0.0 1.5 1 0 0 1 1 1 0 TyeA Methyltransf_31 PF13847.6 gi|73667916|ref|YP_303931.1| - 0.034 13.9 0.1 0.071 12.9 0.1 1.5 1 0 0 1 1 1 0 Methyltransferase domain FAD_binding_3 PF01494.19 gi|73667916|ref|YP_303931.1| - 0.057 12.7 0.0 0.13 11.5 0.0 1.5 1 0 0 1 1 1 0 FAD binding domain IlvN PF07991.12 gi|73667916|ref|YP_303931.1| - 0.098 12.2 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain AglB_L1 PF18079.1 gi|73667917|ref|YP_303932.1| - 1.7e-22 79.5 1.2 3.3e-22 78.6 1.2 1.5 1 0 0 1 1 1 1 Archaeal glycosylation protein B long peripheral domain STT3 PF02516.14 gi|73667917|ref|YP_303932.1| - 3.7e-11 42.6 32.6 1.2e-10 40.9 30.4 2.5 2 1 0 2 2 2 1 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.6 gi|73667917|ref|YP_303932.1| - 0.0075 16.5 18.0 0.0075 16.5 18.0 4.8 4 1 0 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF2510 PF10708.9 gi|73667917|ref|YP_303932.1| - 1.4 8.8 3.4 2.5 7.9 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2510) Glycos_transf_1 PF00534.20 gi|73667918|ref|YP_303933.1| - 2.3e-33 115.2 0.0 3.9e-33 114.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73667918|ref|YP_303933.1| - 2.9e-22 79.5 0.0 5.1e-22 78.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73667918|ref|YP_303933.1| - 1.3e-06 28.5 0.0 1.9e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Epimerase_2 PF02350.19 gi|73667918|ref|YP_303933.1| - 9.7e-06 24.7 0.0 1.6e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_1_2 PF13524.6 gi|73667918|ref|YP_303933.1| - 4.5e-05 23.8 0.0 0.00022 21.5 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 ABC2_membrane PF01061.24 gi|73667919|ref|YP_303934.1| - 3.3e-16 59.3 23.7 3.3e-16 59.3 23.7 1.6 2 0 0 2 2 2 1 ABC-2 type transporter LisH_TPL PF17814.1 gi|73667919|ref|YP_303934.1| - 2.6 7.8 4.8 1.3 8.8 0.2 2.2 2 0 0 2 2 2 0 LisH-like dimerisation domain Wzt_C PF14524.6 gi|73667920|ref|YP_303935.1| - 1.1e-22 80.6 0.1 2.2e-22 79.6 0.1 1.5 1 0 0 1 1 1 1 Wzt C-terminal domain ABC_tran PF00005.27 gi|73667920|ref|YP_303935.1| - 2e-18 67.2 0.0 6.4e-18 65.6 0.0 1.9 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73667920|ref|YP_303935.1| - 4.9e-05 23.3 2.4 0.001 19.0 1.6 2.6 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|73667920|ref|YP_303935.1| - 0.00034 20.3 0.1 0.00067 19.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|73667920|ref|YP_303935.1| - 0.00067 20.2 0.3 0.0013 19.3 0.3 1.4 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|73667920|ref|YP_303935.1| - 0.0076 16.0 0.1 0.014 15.1 0.1 1.5 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73667920|ref|YP_303935.1| - 0.0081 16.1 0.0 0.016 15.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase TSP9 PF11493.8 gi|73667920|ref|YP_303935.1| - 0.03 15.0 0.0 0.055 14.1 0.0 1.4 1 0 0 1 1 1 0 Thylakoid soluble phosphoprotein TSP9 SMC_N PF02463.19 gi|73667920|ref|YP_303935.1| - 0.057 12.8 0.2 0.58 9.6 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain MukB PF04310.12 gi|73667920|ref|YP_303935.1| - 0.079 12.8 0.0 0.39 10.5 0.0 2.0 2 0 0 2 2 2 0 MukB N-terminal Rad17 PF03215.15 gi|73667920|ref|YP_303935.1| - 0.12 12.3 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain Methyltransf_25 PF13649.6 gi|73667921|ref|YP_303936.1| - 2.7e-29 101.7 0.1 1.5e-14 54.4 0.0 3.8 3 0 0 3 3 3 2 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73667921|ref|YP_303936.1| - 8.7e-29 100.5 0.0 1.1e-14 54.6 0.0 3.4 3 0 0 3 3 3 2 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73667921|ref|YP_303936.1| - 2.1e-26 92.5 0.3 2.7e-15 56.5 0.0 3.6 3 0 0 3 3 3 2 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73667921|ref|YP_303936.1| - 4.3e-24 85.1 1.0 3.9e-12 46.8 0.1 3.8 3 0 0 3 3 3 2 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73667921|ref|YP_303936.1| - 7.6e-24 84.2 0.0 2.1e-10 41.1 0.0 3.2 3 0 0 3 3 2 2 Methyltransferase domain MetW PF07021.12 gi|73667921|ref|YP_303936.1| - 5.6e-19 68.5 0.1 3.9e-13 49.4 0.1 2.9 3 0 0 3 3 2 2 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|73667921|ref|YP_303936.1| - 2.4e-14 53.3 0.0 2.7e-08 33.4 0.0 2.6 2 0 0 2 2 2 2 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|73667921|ref|YP_303936.1| - 1.9e-12 47.1 0.0 7.9e-09 35.3 0.0 3.0 3 0 0 3 3 3 2 Methyltransferase small domain TehB PF03848.14 gi|73667921|ref|YP_303936.1| - 2.7e-10 40.0 2.8 1.8e-05 24.3 0.1 2.9 2 0 0 2 2 2 2 Tellurite resistance protein TehB NodS PF05401.11 gi|73667921|ref|YP_303936.1| - 8.6e-08 32.0 0.0 5.4e-06 26.2 0.0 2.3 2 0 0 2 2 2 1 Nodulation protein S (NodS) Methyltransf_4 PF02390.17 gi|73667921|ref|YP_303936.1| - 3e-07 30.1 0.2 0.036 13.5 0.0 3.8 3 0 0 3 3 3 2 Putative methyltransferase Methyltransf_24 PF13578.6 gi|73667921|ref|YP_303936.1| - 3.9e-07 31.1 0.0 1.5e-06 29.2 0.0 2.0 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|73667921|ref|YP_303936.1| - 1.7e-06 27.6 4.4 7.4e-05 22.3 0.0 3.0 3 0 0 3 3 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 gi|73667921|ref|YP_303936.1| - 4.4e-06 26.8 10.6 0.00043 20.3 0.0 3.5 4 1 0 4 4 2 2 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73667921|ref|YP_303936.1| - 1.9e-05 24.1 0.5 0.004 16.5 0.0 2.8 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family FtsJ PF01728.19 gi|73667921|ref|YP_303936.1| - 2.1e-05 24.7 0.0 0.21 11.7 0.0 2.6 2 0 0 2 2 2 2 FtsJ-like methyltransferase Methyltransf_18 PF12847.7 gi|73667921|ref|YP_303936.1| - 6.8e-05 22.8 0.4 0.25 11.3 0.1 3.3 3 1 1 4 4 2 2 Methyltransferase domain RrnaAD PF00398.20 gi|73667921|ref|YP_303936.1| - 0.00012 21.2 0.0 0.001 18.2 0.0 2.3 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase CheR PF01739.18 gi|73667921|ref|YP_303936.1| - 0.00019 21.0 0.1 0.0018 17.8 0.0 2.6 2 1 0 2 2 2 1 CheR methyltransferase, SAM binding domain AdoMet_MTase PF07757.13 gi|73667921|ref|YP_303936.1| - 0.00034 20.9 0.2 0.66 10.3 0.0 2.8 2 0 0 2 2 2 1 Predicted AdoMet-dependent methyltransferase TMF_TATA_bd PF12325.8 gi|73667921|ref|YP_303936.1| - 0.00046 20.4 4.4 0.00046 20.4 4.4 2.7 3 0 0 3 3 2 1 TATA element modulatory factor 1 TATA binding PCMT PF01135.19 gi|73667921|ref|YP_303936.1| - 0.002 17.9 0.0 0.17 11.7 0.0 3.0 3 0 0 3 3 3 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) bZIP_1 PF00170.21 gi|73667921|ref|YP_303936.1| - 0.0021 18.1 7.7 0.0021 18.1 7.7 3.0 3 0 0 3 3 2 1 bZIP transcription factor ZapB PF06005.12 gi|73667921|ref|YP_303936.1| - 0.0025 18.2 4.9 0.0025 18.2 4.9 2.2 2 0 0 2 2 1 1 Cell division protein ZapB Methyltransf_9 PF08003.11 gi|73667921|ref|YP_303936.1| - 0.0042 16.0 0.1 0.8 8.6 0.0 2.9 3 0 0 3 3 3 1 Protein of unknown function (DUF1698) Spermine_synth PF01564.17 gi|73667921|ref|YP_303936.1| - 0.0078 15.6 0.4 4.6 6.6 0.1 2.9 2 0 0 2 2 2 0 Spermine/spermidine synthase domain SecA_SW PF07516.13 gi|73667921|ref|YP_303936.1| - 0.012 15.7 0.1 0.012 15.7 0.1 3.0 2 1 0 2 2 1 0 SecA Wing and Scaffold domain DUF2205 PF10224.9 gi|73667921|ref|YP_303936.1| - 0.013 15.5 1.5 0.056 13.4 1.5 2.1 1 0 0 1 1 1 0 Short coiled-coil protein TRM13 PF05206.14 gi|73667921|ref|YP_303936.1| - 0.03 13.9 0.1 1.4 8.4 0.0 2.6 2 0 0 2 2 2 0 Methyltransferase TRM13 Chibby PF14645.6 gi|73667921|ref|YP_303936.1| - 0.037 14.4 1.5 0.57 10.6 0.8 2.7 2 0 0 2 2 2 0 Chibby family N_BRCA1_IG PF16158.5 gi|73667921|ref|YP_303936.1| - 0.052 14.3 0.0 0.7 10.6 0.0 2.6 2 0 0 2 2 2 0 Ig-like domain from next to BRCA1 gene BST2 PF16716.5 gi|73667921|ref|YP_303936.1| - 0.064 13.8 6.4 0.24 12.0 6.4 2.0 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 DUF3450 PF11932.8 gi|73667921|ref|YP_303936.1| - 0.075 12.3 3.6 0.17 11.2 3.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DivIC PF04977.15 gi|73667921|ref|YP_303936.1| - 0.1 12.4 6.1 0.085 12.6 3.3 2.4 2 0 0 2 2 1 0 Septum formation initiator DUF948 PF06103.11 gi|73667921|ref|YP_303936.1| - 0.12 12.7 1.9 0.89 9.9 2.1 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) HALZ PF02183.18 gi|73667921|ref|YP_303936.1| - 0.24 11.7 10.1 0.036 14.3 5.0 2.4 2 1 1 3 3 2 0 Homeobox associated leucine zipper Uso1_p115_C PF04871.13 gi|73667921|ref|YP_303936.1| - 0.34 11.3 15.6 0.19 12.1 5.1 2.7 2 0 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region LPP PF04728.13 gi|73667921|ref|YP_303936.1| - 0.38 11.2 7.0 2.1 8.8 2.3 3.3 1 1 1 2 2 2 0 Lipoprotein leucine-zipper ORF6C PF10552.9 gi|73667921|ref|YP_303936.1| - 0.52 10.4 7.2 11 6.1 2.8 2.8 1 1 1 2 2 2 0 ORF6C domain Cep57_MT_bd PF06657.13 gi|73667921|ref|YP_303936.1| - 1.4 9.4 6.6 0.74 10.3 3.3 2.3 2 0 0 2 2 1 0 Centrosome microtubule-binding domain of Cep57 Myc-LZ PF02344.15 gi|73667921|ref|YP_303936.1| - 1.7 8.8 5.7 1.9 8.6 4.2 2.0 1 1 1 2 2 2 0 Myc leucine zipper domain bZIP_2 PF07716.15 gi|73667921|ref|YP_303936.1| - 1.7 8.8 9.3 1.5 9.0 5.6 2.7 3 0 0 3 3 2 0 Basic region leucine zipper Fez1 PF06818.15 gi|73667921|ref|YP_303936.1| - 1.8 9.0 12.8 0.088 13.3 4.0 2.4 2 0 0 2 2 2 0 Fez1 HAP1_N PF04849.13 gi|73667921|ref|YP_303936.1| - 5.1 6.2 17.3 0.03 13.5 5.3 2.2 2 0 0 2 2 2 0 HAP1 N-terminal conserved region DUF1640 PF07798.11 gi|73667921|ref|YP_303936.1| - 5.3 7.1 10.8 0.091 12.8 3.0 1.9 2 0 0 2 2 1 0 Protein of unknown function (DUF1640) NRBF2 PF08961.10 gi|73667921|ref|YP_303936.1| - 7.8 6.1 10.7 0.1 12.2 2.1 2.2 2 0 0 2 2 1 0 Nuclear receptor-binding factor 2, autophagy regulator Ax_dynein_light PF10211.9 gi|73667921|ref|YP_303936.1| - 8 6.4 15.1 0.18 11.8 3.0 2.5 2 0 0 2 2 2 0 Axonemal dynein light chain PA26 PF04636.13 gi|73667921|ref|YP_303936.1| - 9.2 5.1 10.1 0.79 8.6 2.1 2.3 2 0 0 2 2 2 0 PA26 p53-induced protein (sestrin) Spc7 PF08317.11 gi|73667921|ref|YP_303936.1| - 9.8 5.0 18.2 0.044 12.7 6.5 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein Glycos_transf_1 PF00534.20 gi|73667922|ref|YP_303937.1| - 1.9e-17 63.3 0.0 3.7e-17 62.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|73667922|ref|YP_303937.1| - 2.5e-11 43.8 0.0 4.5e-11 43.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73667922|ref|YP_303937.1| - 2.5e-10 40.9 0.0 3.8e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73667922|ref|YP_303937.1| - 0.028 14.4 0.0 0.19 11.7 0.0 2.1 2 0 0 2 2 2 0 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|73667923|ref|YP_303938.1| - 9e-28 96.9 0.0 3.8e-27 94.9 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73667923|ref|YP_303938.1| - 7e-17 62.1 0.0 1.1e-16 61.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|73667923|ref|YP_303938.1| - 0.03 14.7 0.0 0.064 13.6 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|73667924|ref|YP_303939.1| - 1.9e-17 63.3 0.0 3.7e-17 62.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73667924|ref|YP_303939.1| - 3.5e-12 46.9 0.0 5.7e-12 46.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|73667924|ref|YP_303939.1| - 5.3e-10 39.6 0.0 1.2e-09 38.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73667924|ref|YP_303939.1| - 0.0026 17.8 0.0 0.59 10.1 0.0 2.2 2 0 0 2 2 2 2 Glycosyltransferase Family 4 DUF1699 PF08004.11 gi|73667925|ref|YP_303940.1| - 6.4e-63 210.2 2.4 7.2e-63 210.1 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|73667925|ref|YP_303940.1| - 0.09 13.1 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) PAM2 PF07145.15 gi|73667925|ref|YP_303940.1| - 0.096 12.4 0.3 12 5.8 0.1 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region ATP-synt_C PF00137.21 gi|73667927|ref|YP_303942.1| - 4e-14 52.7 10.9 5.3e-14 52.3 10.9 1.2 1 0 0 1 1 1 1 ATP synthase subunit C CinA PF02464.17 gi|73667927|ref|YP_303942.1| - 0.012 15.2 0.9 0.012 15.2 0.9 1.1 1 0 0 1 1 1 0 Competence-damaged protein ATG16 PF08614.11 gi|73667928|ref|YP_303943.1| - 9.7e-05 22.7 47.8 9.7e-05 22.7 25.3 2.7 1 1 1 2 2 2 1 Autophagy protein 16 (ATG16) Fez1 PF06818.15 gi|73667928|ref|YP_303943.1| - 0.00052 20.5 51.2 0.19 12.2 18.9 3.8 1 1 2 3 3 3 3 Fez1 SlyX PF04102.12 gi|73667928|ref|YP_303943.1| - 0.0037 17.9 35.3 0.051 14.2 3.1 5.2 1 1 5 6 6 6 3 SlyX HMMR_N PF15905.5 gi|73667928|ref|YP_303943.1| - 0.007 15.9 40.1 0.007 15.9 40.1 2.9 1 1 2 3 3 3 1 Hyaluronan mediated motility receptor N-terminal ERM PF00769.19 gi|73667928|ref|YP_303943.1| - 0.013 15.3 29.9 0.013 15.3 29.9 3.1 1 1 2 3 3 3 0 Ezrin/radixin/moesin family DUF16 PF01519.16 gi|73667928|ref|YP_303943.1| - 0.05 14.1 41.1 0.64 10.5 9.0 4.2 1 1 3 4 4 4 0 Protein of unknown function DUF16 Golgin_A5 PF09787.9 gi|73667928|ref|YP_303943.1| - 0.29 10.5 45.1 0.22 11.0 24.1 2.3 1 1 1 2 2 2 0 Golgin subfamily A member 5 PKcGMP_CC PF16808.5 gi|73667928|ref|YP_303943.1| - 0.3 11.0 46.9 0.28 11.1 0.5 7.1 5 2 3 8 8 8 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Fib_alpha PF08702.10 gi|73667928|ref|YP_303943.1| - 0.67 10.1 33.8 0.026 14.7 10.5 4.2 1 1 1 3 3 3 0 Fibrinogen alpha/beta chain family Lebercilin PF15619.6 gi|73667928|ref|YP_303943.1| - 1.3 8.7 54.6 0.64 9.6 27.1 3.4 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease VWA_N PF08399.11 gi|73667928|ref|YP_303943.1| - 1.6 9.2 0.0 1.6 9.2 0.0 3.5 3 1 1 4 4 4 0 VWA N-terminal DUF4201 PF13870.6 gi|73667928|ref|YP_303943.1| - 1.8 8.3 56.1 0.051 13.3 13.0 4.1 1 1 3 4 4 4 0 Domain of unknown function (DUF4201) BLOC1_2 PF10046.9 gi|73667928|ref|YP_303943.1| - 2.7 8.3 32.1 1.8 8.9 6.3 4.0 1 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF3552 PF12072.8 gi|73667928|ref|YP_303943.1| - 4.9 6.5 58.5 3.9 6.8 15.0 3.9 1 1 3 4 4 4 0 Domain of unknown function (DUF3552) Noelin-1 PF12308.8 gi|73667928|ref|YP_303943.1| - 5.7 7.0 18.3 3.3 7.7 0.8 4.0 1 1 3 4 4 4 0 Neurogenesis glycoprotein Csm1_N PF18504.1 gi|73667928|ref|YP_303943.1| - 9 6.7 47.4 1.6 9.2 1.8 6.1 1 1 5 6 6 6 0 Csm1 N-terminal domain DUF1699 PF08004.11 gi|73667929|ref|YP_303944.1| - 8.9e-48 161.2 0.1 1e-47 161.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) DUF4394 PF14339.6 gi|73667929|ref|YP_303944.1| - 0.078 12.3 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) Sua5_yciO_yrdC PF01300.18 gi|73667930|ref|YP_303945.1| - 3.6e-45 153.7 0.0 6.5e-45 152.8 0.0 1.4 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.12 gi|73667930|ref|YP_303945.1| - 7.6e-32 108.8 17.3 3.6e-16 58.6 5.9 2.4 2 0 0 2 2 2 2 HypF finger HypF_C PF17788.1 gi|73667930|ref|YP_303945.1| - 1.3e-24 86.8 0.3 4.2e-24 85.2 0.6 1.7 2 0 0 2 2 2 1 HypF Kae1-like domain Acylphosphatase PF00708.18 gi|73667930|ref|YP_303945.1| - 5.6e-22 77.9 0.1 1.6e-21 76.5 0.0 1.8 2 0 0 2 2 2 1 Acylphosphatase Peptidase_M22 PF00814.25 gi|73667930|ref|YP_303945.1| - 0.0022 17.7 0.0 0.0044 16.8 0.0 1.4 1 0 0 1 1 1 1 Glycoprotease family DZR PF12773.7 gi|73667930|ref|YP_303945.1| - 0.0081 16.2 7.3 0.35 10.9 0.4 2.3 2 0 0 2 2 2 2 Double zinc ribbon Cys_rich_KTR PF14205.6 gi|73667930|ref|YP_303945.1| - 1.1 9.1 4.4 12 5.8 1.4 2.8 3 0 0 3 3 3 0 Cysteine-rich KTR LIM PF00412.22 gi|73667930|ref|YP_303945.1| - 2.8 8.2 4.4 25 5.2 1.2 2.5 1 1 1 2 2 2 0 LIM domain FYDLN_acid PF09538.10 gi|73667930|ref|YP_303945.1| - 4.2 8.1 4.6 0.88 10.3 0.9 1.7 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) NMD3 PF04981.13 gi|73667930|ref|YP_303945.1| - 6.3 6.2 7.0 5.1 6.5 0.3 2.3 1 1 1 2 2 2 0 NMD3 family DUF2370 PF10176.9 gi|73667931|ref|YP_303946.1| - 0.13 11.9 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) ATP-synt_D PF01813.17 gi|73667932|ref|YP_303947.1| - 4.3e-55 186.6 6.7 4.8e-55 186.4 6.7 1.0 1 0 0 1 1 1 1 ATP synthase subunit D Ead_Ea22 PF13935.6 gi|73667932|ref|YP_303947.1| - 0.12 13.1 0.8 0.46 11.1 0.0 2.0 1 1 1 2 2 2 0 Ead/Ea22-like protein HNOBA PF07701.14 gi|73667932|ref|YP_303947.1| - 0.12 11.7 0.5 0.28 10.6 0.2 1.7 2 0 0 2 2 2 0 Heme NO binding associated ATP-synt_ab PF00006.25 gi|73667933|ref|YP_303948.1| - 9.6e-66 221.5 0.0 1.4e-65 220.9 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|73667933|ref|YP_303948.1| - 3e-14 53.3 1.1 3e-14 53.3 1.1 1.8 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|73667933|ref|YP_303948.1| - 0.0075 16.4 1.1 0.016 15.4 0.5 1.9 2 0 0 2 2 2 1 HAS barrel domain DUF561 PF04481.12 gi|73667933|ref|YP_303948.1| - 0.066 12.4 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) ATP-synt_ab PF00006.25 gi|73667934|ref|YP_303949.1| - 6.3e-95 316.8 0.0 9.1e-95 316.3 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|73667934|ref|YP_303949.1| - 8.4e-43 145.1 0.1 1.6e-42 144.2 0.1 1.5 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|73667934|ref|YP_303949.1| - 5.5e-13 49.2 0.7 2.3e-12 47.3 0.5 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain RnfC_N PF13375.6 gi|73667934|ref|YP_303949.1| - 0.052 13.5 1.3 0.27 11.2 0.1 2.3 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain AAA_22 PF13401.6 gi|73667934|ref|YP_303949.1| - 0.062 13.6 0.0 0.14 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATP-synt_F PF01990.17 gi|73667935|ref|YP_303950.1| - 3.3e-14 53.0 0.0 3.6e-14 52.8 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit vATP-synt_AC39 PF01992.16 gi|73667936|ref|YP_303951.1| - 4.9e-70 236.7 5.5 5.6e-70 236.5 5.5 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit vATP-synt_E PF01991.18 gi|73667937|ref|YP_303952.1| - 2.7e-19 69.4 15.1 1.6e-17 63.6 15.1 2.0 1 1 0 1 1 1 1 ATP synthase (E/31 kDa) subunit OmpH PF03938.14 gi|73667937|ref|YP_303952.1| - 0.036 14.4 9.3 0.051 13.9 9.3 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) GPAT_N PF14829.6 gi|73667937|ref|YP_303952.1| - 0.068 13.2 0.9 0.17 11.9 0.4 2.0 2 0 0 2 2 2 0 Glycerol-3-phosphate acyltransferase N-terminal V-ATPase_G PF03179.15 gi|73667937|ref|YP_303952.1| - 0.23 12.0 9.4 0.12 12.9 6.9 1.9 2 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 gi|73667937|ref|YP_303952.1| - 0.26 11.4 6.3 0.4 10.8 6.0 1.5 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) RNase_J_C PF17770.1 gi|73667937|ref|YP_303952.1| - 0.5 11.5 3.4 0.58 11.2 1.0 2.3 1 1 1 2 2 2 0 Ribonuclease J C-terminal domain DUF1104 PF06518.11 gi|73667937|ref|YP_303952.1| - 1.8 9.0 7.4 0.78 10.2 4.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1104) ATP-synt_C PF00137.21 gi|73667938|ref|YP_303953.1| - 2.8e-14 53.2 11.5 3.7e-14 52.8 11.5 1.2 1 0 0 1 1 1 1 ATP synthase subunit C CinA PF02464.17 gi|73667938|ref|YP_303953.1| - 0.011 15.3 0.8 0.012 15.2 0.8 1.1 1 0 0 1 1 1 0 Competence-damaged protein V_ATPase_I PF01496.19 gi|73667939|ref|YP_303954.1| - 3e-30 104.9 9.1 1.3e-20 73.0 0.2 3.4 3 1 0 3 3 3 2 V-type ATPase 116kDa subunit family TOM13 PF08219.11 gi|73667939|ref|YP_303954.1| - 0.0026 17.7 0.0 0.0097 15.8 0.0 2.0 1 0 0 1 1 1 1 Outer membrane protein TOM13 Vps51 PF08700.11 gi|73667939|ref|YP_303954.1| - 0.027 14.6 2.5 0.17 12.0 0.1 2.6 2 1 0 2 2 2 0 Vps51/Vps67 DUF1351 PF07083.11 gi|73667939|ref|YP_303954.1| - 0.038 13.8 6.0 0.12 12.1 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1351) UPF0242 PF06785.11 gi|73667939|ref|YP_303954.1| - 0.054 13.6 4.7 1 9.5 0.3 3.0 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus DUF5082 PF16888.5 gi|73667939|ref|YP_303954.1| - 0.059 13.7 3.7 0.11 12.8 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) Atg14 PF10186.9 gi|73667939|ref|YP_303954.1| - 0.077 12.1 0.3 0.27 10.3 0.1 1.8 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 ZapB PF06005.12 gi|73667939|ref|YP_303954.1| - 0.11 12.9 2.4 7.2 7.1 0.3 2.4 2 0 0 2 2 2 0 Cell division protein ZapB NYD-SP28 PF14772.6 gi|73667939|ref|YP_303954.1| - 0.12 12.4 1.1 1.6 8.9 0.4 2.4 2 0 0 2 2 2 0 Sperm tail Spc7 PF08317.11 gi|73667939|ref|YP_303954.1| - 0.18 10.7 3.9 0.44 9.4 1.3 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein DivIC PF04977.15 gi|73667939|ref|YP_303954.1| - 0.2 11.4 5.8 6.8 6.5 2.1 2.8 2 0 0 2 2 2 0 Septum formation initiator Dict-STAT-coil PF09267.10 gi|73667939|ref|YP_303954.1| - 0.22 11.9 0.7 32 4.9 0.2 2.9 2 1 1 3 3 3 0 Dictyostelium STAT, coiled coil CENP-F_leu_zip PF10473.9 gi|73667939|ref|YP_303954.1| - 0.37 10.8 7.0 5.6 7.0 0.7 2.8 3 0 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SKA1 PF07160.12 gi|73667939|ref|YP_303954.1| - 0.42 10.4 4.0 0.87 9.4 0.8 2.3 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 DUF2905 PF11146.8 gi|73667939|ref|YP_303954.1| - 0.47 10.7 5.3 9.6 6.5 0.2 3.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2905) ATG16 PF08614.11 gi|73667939|ref|YP_303954.1| - 0.51 10.5 5.6 2.9 8.1 2.8 2.4 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) TolA_bind_tri PF16331.5 gi|73667939|ref|YP_303954.1| - 0.52 10.4 2.8 7.7 6.7 1.4 2.3 2 0 0 2 2 2 0 TolA binding protein trimerisation TMF_DNA_bd PF12329.8 gi|73667939|ref|YP_303954.1| - 0.71 9.9 7.3 0.43 10.6 2.1 2.4 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF3450 PF11932.8 gi|73667939|ref|YP_303954.1| - 0.72 9.1 2.6 1.4 8.2 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) BLOC1_2 PF10046.9 gi|73667939|ref|YP_303954.1| - 0.8 10.1 5.9 8.9 6.7 0.2 2.7 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF3552 PF12072.8 gi|73667939|ref|YP_303954.1| - 1.1 8.7 4.3 3.7 6.9 1.5 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) DUF4200 PF13863.6 gi|73667939|ref|YP_303954.1| - 1.4 9.3 4.4 3.8 8.0 0.9 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) FlaC_arch PF05377.11 gi|73667939|ref|YP_303954.1| - 1.5 9.3 4.7 8.3 6.9 1.6 2.9 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) CLZ PF16526.5 gi|73667939|ref|YP_303954.1| - 1.7 9.0 4.3 1.9 8.9 0.2 2.4 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Fib_alpha PF08702.10 gi|73667939|ref|YP_303954.1| - 3.3 7.9 4.4 13 6.0 1.0 2.4 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Prefoldin_2 PF01920.20 gi|73667939|ref|YP_303954.1| - 6 6.9 8.1 25 4.9 2.5 2.4 2 0 0 2 2 2 0 Prefoldin subunit V-ATPase_G_2 PF16999.5 gi|73667940|ref|YP_303955.1| - 2.7e-08 34.1 17.7 3.3e-08 33.9 17.7 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit V-ATPase_G PF03179.15 gi|73667940|ref|YP_303955.1| - 5.1e-05 23.8 15.6 7.2e-05 23.3 15.6 1.3 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 gi|73667940|ref|YP_303955.1| - 0.00021 21.4 20.8 0.0015 18.6 13.7 2.0 1 1 1 2 2 2 2 ATP synthase B/B' CF(0) HOIP-UBA PF16678.5 gi|73667940|ref|YP_303955.1| - 0.23 11.5 6.3 0.46 10.5 6.3 1.6 1 1 0 1 1 1 0 HOIP UBA domain pair HrpE PF06188.12 gi|73667940|ref|YP_303955.1| - 0.25 11.2 4.6 0.34 10.8 4.6 1.3 1 1 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E YhzD PF14120.6 gi|73667940|ref|YP_303955.1| - 0.25 11.5 2.1 0.6 10.3 1.6 1.9 1 1 1 2 2 2 0 YhzD-like protein DUF3043 PF11241.8 gi|73667940|ref|YP_303955.1| - 0.53 10.3 3.2 0.7 9.9 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF883 PF05957.13 gi|73667940|ref|YP_303955.1| - 0.79 10.4 8.4 0.65 10.6 6.7 1.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) FAM25 PF15825.5 gi|73667940|ref|YP_303955.1| - 2 8.8 9.5 1.5 9.2 1.3 2.8 1 1 2 3 3 3 0 FAM25 family Radical_SAM PF04055.21 gi|73667941|ref|YP_303956.1| - 1.8e-14 54.4 0.0 3.4e-14 53.6 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|73667941|ref|YP_303956.1| - 1.4e-09 38.3 0.1 3.1e-09 37.2 0.1 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|73667941|ref|YP_303956.1| - 0.066 13.5 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain polyprenyl_synt PF00348.17 gi|73667942|ref|YP_303957.1| - 4.5e-48 163.5 0.0 5.6e-48 163.2 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Lactamase_B PF00753.27 gi|73667943|ref|YP_303958.1| - 2.9e-08 34.0 0.0 2.3e-07 31.0 0.0 2.1 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily ACT PF01842.25 gi|73667943|ref|YP_303958.1| - 2.8e-07 30.2 0.0 0.00094 18.9 0.0 2.6 2 0 0 2 2 2 2 ACT domain Thr_dehydrat_C PF00585.18 gi|73667943|ref|YP_303958.1| - 0.015 15.1 0.0 0.92 9.3 0.0 2.5 1 1 1 2 2 2 0 C-terminal regulatory domain of Threonine dehydratase Pox_polyA_pol PF03296.13 gi|73667943|ref|YP_303958.1| - 0.044 13.7 0.6 0.099 12.5 0.1 1.8 2 0 0 2 2 2 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Lactamase_B_2 PF12706.7 gi|73667943|ref|YP_303958.1| - 0.052 13.1 0.0 0.12 11.8 0.0 1.6 2 0 0 2 2 2 0 Beta-lactamase superfamily domain ACT_4 PF13291.6 gi|73667943|ref|YP_303958.1| - 0.093 13.3 0.0 2.9 8.5 0.0 2.5 2 0 0 2 2 2 0 ACT domain DUF123 PF01986.16 gi|73667944|ref|YP_303959.1| - 1.9e-30 105.2 0.0 2.5e-30 104.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF123 ADP_ribosyl_GH PF03747.14 gi|73667945|ref|YP_303960.1| - 1.9e-65 221.5 0.1 2.2e-65 221.3 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase NFRKB_winged PF14465.6 gi|73667946|ref|YP_303961.1| - 1.1 9.4 4.5 14 5.9 0.1 3.2 3 0 0 3 3 3 0 NFRKB Winged Helix-like AAA PF00004.29 gi|73667948|ref|YP_303963.1| - 1.2e-42 145.5 0.0 2.9e-42 144.2 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|73667948|ref|YP_303963.1| - 2e-12 46.7 0.0 6.8e-12 45.0 0.0 1.9 2 0 0 2 2 2 1 AAA+ lid domain AAA_16 PF13191.6 gi|73667948|ref|YP_303963.1| - 3.9e-06 27.3 0.1 0.00043 20.7 0.1 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 gi|73667948|ref|YP_303963.1| - 4.2e-05 23.6 0.0 0.00014 21.8 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|73667948|ref|YP_303963.1| - 7.9e-05 22.4 0.0 0.0003 20.6 0.0 2.0 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|73667948|ref|YP_303963.1| - 0.00011 22.4 0.0 0.0003 20.9 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|73667948|ref|YP_303963.1| - 0.00064 20.0 0.2 0.045 14.0 0.2 2.6 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|73667948|ref|YP_303963.1| - 0.0022 18.0 0.0 0.0074 16.3 0.0 1.8 2 0 0 2 2 1 1 AAA domain AAA_3 PF07726.11 gi|73667948|ref|YP_303963.1| - 0.0039 17.1 0.1 0.016 15.1 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Torsin PF06309.11 gi|73667948|ref|YP_303963.1| - 0.0056 16.8 0.0 0.013 15.6 0.0 1.5 1 0 0 1 1 1 1 Torsin ATPase PF06745.13 gi|73667948|ref|YP_303963.1| - 0.0065 15.8 0.0 0.041 13.2 0.0 2.3 1 1 1 2 2 2 1 KaiC AAA_33 PF13671.6 gi|73667948|ref|YP_303963.1| - 0.0067 16.6 0.0 0.014 15.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|73667948|ref|YP_303963.1| - 0.0068 16.8 0.0 0.012 15.9 0.0 1.4 1 0 0 1 1 1 1 RNA helicase Sigma54_activat PF00158.26 gi|73667948|ref|YP_303963.1| - 0.0085 15.8 0.1 0.049 13.3 0.0 2.3 3 0 0 3 3 3 1 Sigma-54 interaction domain TIP49 PF06068.13 gi|73667948|ref|YP_303963.1| - 0.011 14.9 0.0 0.023 13.9 0.0 1.5 1 0 0 1 1 1 0 TIP49 P-loop domain CPT PF07931.12 gi|73667948|ref|YP_303963.1| - 0.014 15.2 0.0 0.029 14.2 0.0 1.5 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_18 PF13238.6 gi|73667948|ref|YP_303963.1| - 0.015 15.8 0.0 0.054 14.1 0.0 1.9 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 gi|73667948|ref|YP_303963.1| - 0.021 14.9 0.0 0.17 12.0 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|73667948|ref|YP_303963.1| - 0.026 14.3 0.0 0.053 13.2 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_28 PF13521.6 gi|73667948|ref|YP_303963.1| - 0.03 14.6 0.0 0.062 13.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|73667948|ref|YP_303963.1| - 0.032 13.6 0.1 0.096 12.1 0.1 1.8 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF2075 PF09848.9 gi|73667948|ref|YP_303963.1| - 0.035 13.4 0.0 0.055 12.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 gi|73667948|ref|YP_303963.1| - 0.043 13.5 0.0 0.072 12.8 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NB-ARC PF00931.22 gi|73667948|ref|YP_303963.1| - 0.045 12.9 0.1 0.34 10.1 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain AAA_30 PF13604.6 gi|73667948|ref|YP_303963.1| - 0.059 13.1 0.0 0.2 11.4 0.0 2.0 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|73667948|ref|YP_303963.1| - 0.064 13.7 0.1 0.4 11.1 0.0 2.3 2 1 1 3 3 3 0 AAA domain AAA_19 PF13245.6 gi|73667948|ref|YP_303963.1| - 0.067 13.5 0.1 0.28 11.5 0.1 2.0 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|73667948|ref|YP_303963.1| - 0.068 12.3 0.0 0.13 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) NACHT PF05729.12 gi|73667948|ref|YP_303963.1| - 0.11 12.4 0.2 0.32 10.9 0.1 1.8 1 1 1 2 2 2 0 NACHT domain Parvo_NS1 PF01057.17 gi|73667948|ref|YP_303963.1| - 0.21 10.7 0.0 0.38 9.8 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF131 PF01998.17 gi|73667949|ref|YP_303964.1| - 1.6e-13 50.1 4.9 1.6e-13 50.1 4.9 2.1 1 1 1 2 2 2 1 Protein of unknown function DUF131 HRG PF16954.5 gi|73667949|ref|YP_303964.1| - 0.0064 16.9 3.3 0.96 9.9 0.1 2.1 2 0 0 2 2 2 2 Haem-transporter, endosomal/lysosomal, haem-responsive gene DUF202 PF02656.15 gi|73667949|ref|YP_303964.1| - 0.11 13.0 1.1 0.22 12.0 1.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF131 PF01998.17 gi|73667950|ref|YP_303965.1| - 3.4e-23 81.1 0.9 3.4e-23 81.1 0.9 2.3 1 1 1 2 2 2 1 Protein of unknown function DUF131 DUF5362 PF17319.2 gi|73667950|ref|YP_303965.1| - 0.0017 18.2 3.4 0.01 15.6 0.0 2.3 2 1 0 2 2 2 1 Family of unknown function (DUF5362) DUF2371 PF10177.9 gi|73667950|ref|YP_303965.1| - 0.0065 16.6 0.0 0.0095 16.1 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2371) Saf_2TM PF18303.1 gi|73667950|ref|YP_303965.1| - 0.017 14.7 0.3 0.14 11.8 0.0 2.0 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain DUF202 PF02656.15 gi|73667950|ref|YP_303965.1| - 0.036 14.5 1.5 9.5 6.7 0.8 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF202) DUF4418 PF14387.6 gi|73667950|ref|YP_303965.1| - 0.048 13.9 1.7 1.4 9.1 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4418) Tetraspanin PF00335.20 gi|73667950|ref|YP_303965.1| - 0.05 13.3 0.5 0.13 12.0 0.5 1.6 1 1 0 1 1 1 0 Tetraspanin family Tmemb_9 PF05434.11 gi|73667950|ref|YP_303965.1| - 0.13 12.2 0.5 0.3 11.0 0.0 1.7 2 0 0 2 2 2 0 TMEM9 DUF3040 PF11239.8 gi|73667950|ref|YP_303965.1| - 0.17 12.2 0.9 3.1 8.1 0.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3040) DUF4834 PF16118.5 gi|73667950|ref|YP_303965.1| - 0.18 12.8 0.0 0.18 12.8 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) S_4TM PF18159.1 gi|73667950|ref|YP_303965.1| - 0.18 11.0 1.4 1 8.6 0.0 1.9 1 1 1 2 2 2 0 SMODS-associating 4TM effector domain LapA_dom PF06305.11 gi|73667950|ref|YP_303965.1| - 0.25 11.2 2.4 1.3 8.9 0.0 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Adenylsucc_synt PF00709.21 gi|73667951|ref|YP_303966.1| - 4.5e-161 536.5 0.0 5.1e-161 536.3 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase PAS_3 PF08447.12 gi|73667952|ref|YP_303967.1| - 1.2e-64 214.6 0.4 8.6e-18 64.4 0.0 5.6 5 0 0 5 5 5 5 PAS fold PocR PF10114.9 gi|73667952|ref|YP_303967.1| - 4.4e-44 150.1 0.6 1.4e-43 148.5 0.0 2.1 2 0 0 2 2 2 1 Sensory domain found in PocR PAS_4 PF08448.10 gi|73667952|ref|YP_303967.1| - 3.6e-41 139.8 0.1 3.1e-13 49.9 0.0 6.3 6 0 0 6 6 6 5 PAS fold HisKA_2 PF07568.12 gi|73667952|ref|YP_303967.1| - 3.1e-33 113.7 0.5 3.1e-33 113.7 0.5 3.2 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.7 gi|73667952|ref|YP_303967.1| - 1.1e-32 112.4 0.0 2.5e-16 59.8 0.0 6.5 6 0 0 6 6 6 5 PAS domain PAS PF00989.25 gi|73667952|ref|YP_303967.1| - 1.8e-31 108.5 0.0 6.9e-12 45.4 0.0 6.5 6 0 0 6 6 6 6 PAS fold PAS_8 PF13188.7 gi|73667952|ref|YP_303967.1| - 4.9e-09 36.0 0.0 5.8e-07 29.4 0.0 3.8 4 0 0 4 4 4 1 PAS domain HATPase_c PF02518.26 gi|73667952|ref|YP_303967.1| - 3.1e-07 30.9 0.3 2e-06 28.3 0.3 2.5 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.6 gi|73667952|ref|YP_303967.1| - 0.00064 20.3 1.4 2.6 8.7 0.0 4.6 5 0 0 5 5 4 1 PAS domain HATPase_c_2 PF13581.6 gi|73667952|ref|YP_303967.1| - 0.00081 19.4 0.0 0.0024 17.8 0.0 1.9 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|73667952|ref|YP_303967.1| - 0.0011 19.6 2.5 0.0016 19.1 0.2 2.6 3 0 0 3 3 2 1 HWE histidine kinase PAS_7 PF12860.7 gi|73667952|ref|YP_303967.1| - 0.0083 16.3 2.4 23 5.2 0.0 5.0 5 0 0 5 5 5 0 PAS fold NAT PF04768.13 gi|73667952|ref|YP_303967.1| - 0.08 12.6 0.0 0.25 11.0 0.0 1.8 2 0 0 2 2 2 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase OEP PF02321.18 gi|73667952|ref|YP_303967.1| - 0.25 11.1 7.7 0.15 11.8 0.7 2.8 2 0 0 2 2 2 0 Outer membrane efflux protein OmpH PF03938.14 gi|73667952|ref|YP_303967.1| - 1.3 9.3 6.1 0.64 10.4 1.6 2.5 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) MFS_1 PF07690.16 gi|73667953|ref|YP_303968.1| - 1.7e-27 96.3 82.6 6.6e-21 74.6 48.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily E1-E2_ATPase PF00122.20 gi|73667954|ref|YP_303969.1| - 6.6e-49 165.9 5.3 6.6e-49 165.9 5.3 2.4 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|73667954|ref|YP_303969.1| - 2.4e-43 148.0 5.5 5.6e-43 146.8 5.5 1.7 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Cation_ATPase_N PF00690.26 gi|73667954|ref|YP_303969.1| - 3.1e-21 74.8 0.0 7.1e-21 73.7 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase PF00702.26 gi|73667954|ref|YP_303969.1| - 1.5e-20 74.4 2.4 9.8e-20 71.7 2.4 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|73667954|ref|YP_303969.1| - 2.4e-17 62.8 0.0 5.6e-17 61.6 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|73667954|ref|YP_303969.1| - 2.4e-07 30.8 0.7 0.00022 21.0 0.4 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|73667954|ref|YP_303969.1| - 0.013 16.0 0.0 0.039 14.3 0.0 1.9 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|73667954|ref|YP_303969.1| - 0.045 13.9 0.0 0.58 10.3 0.0 2.7 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase MarR_2 PF12802.7 gi|73667955|ref|YP_303970.1| - 1.3e-05 25.0 0.0 1.8e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 MarR family TBPIP PF07106.13 gi|73667955|ref|YP_303970.1| - 0.00011 22.0 0.1 0.00049 20.0 0.0 2.0 2 1 1 3 3 3 1 TBPIP/Hop2 winged helix domain HTH_IclR PF09339.10 gi|73667955|ref|YP_303970.1| - 0.00017 21.3 0.0 0.00023 20.9 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|73667955|ref|YP_303970.1| - 0.0022 17.9 0.0 0.0043 17.0 0.0 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|73667955|ref|YP_303970.1| - 0.0035 17.2 0.0 0.0051 16.7 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FUR PF01475.19 gi|73667955|ref|YP_303970.1| - 0.014 15.5 0.0 0.017 15.3 0.0 1.2 1 0 0 1 1 1 0 Ferric uptake regulator family HTH_5 PF01022.20 gi|73667955|ref|YP_303970.1| - 0.026 14.4 0.0 0.038 13.9 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 gi|73667955|ref|YP_303970.1| - 0.029 14.7 0.0 0.035 14.5 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|73667955|ref|YP_303970.1| - 0.035 14.1 0.0 0.05 13.6 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|73667955|ref|YP_303970.1| - 0.047 13.2 0.0 0.075 12.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|73667955|ref|YP_303970.1| - 0.062 13.4 0.0 0.082 13.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|73667955|ref|YP_303970.1| - 0.086 13.3 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Polysacc_deac_1 PF01522.21 gi|73667956|ref|YP_303971.1| - 1.1e-28 99.7 0.0 1.8e-28 98.9 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 gi|73667956|ref|YP_303971.1| - 0.062 12.5 0.0 0.41 9.8 0.0 1.9 1 1 0 1 1 1 0 Glycosyl hydrolase family 57 eRF1_2 PF03464.15 gi|73667957|ref|YP_303972.1| - 2.4e-38 131.4 0.0 4.2e-38 130.7 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|73667957|ref|YP_303972.1| - 1.4e-27 96.4 0.2 4.3e-27 94.8 0.0 1.9 2 0 0 2 2 2 1 eRF1 domain 3 baeRF_family10 PF18854.1 gi|73667957|ref|YP_303972.1| - 1.5e-11 44.7 0.0 2.7e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_1 PF03463.15 gi|73667957|ref|YP_303972.1| - 5.4e-10 39.4 0.1 4.5e-09 36.4 0.0 2.0 2 0 0 2 2 2 1 eRF1 domain 1 acVLRF1 PF18859.1 gi|73667957|ref|YP_303972.1| - 8.5e-09 35.8 0.0 1.6e-08 34.9 0.0 1.4 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor HypA PF01155.19 gi|73667957|ref|YP_303972.1| - 0.0046 17.0 0.1 0.0088 16.1 0.1 1.5 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RNA_POL_M_15KD PF02150.16 gi|73667957|ref|YP_303972.1| - 0.011 15.5 1.0 4.1 7.4 0.1 3.0 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit DNA_ligase_ZBD PF03119.16 gi|73667957|ref|YP_303972.1| - 0.027 14.5 0.1 0.068 13.2 0.1 1.7 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Zn-ribbon_8 PF09723.10 gi|73667957|ref|YP_303972.1| - 0.028 14.5 0.3 0.028 14.5 0.3 2.5 3 0 0 3 3 3 0 Zinc ribbon domain zinc_ribbon_10 PF10058.9 gi|73667957|ref|YP_303972.1| - 0.044 13.5 0.1 0.1 12.3 0.1 1.6 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Ribosomal_L37e PF01907.19 gi|73667957|ref|YP_303972.1| - 0.074 13.2 0.7 0.22 11.7 0.7 1.8 1 0 0 1 1 1 0 Ribosomal protein L37e zinc_ribbon_4 PF13717.6 gi|73667957|ref|YP_303972.1| - 0.2 11.6 0.3 3.1 7.8 0.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|73667957|ref|YP_303972.1| - 0.22 11.0 1.7 3.9 7.0 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|73667957|ref|YP_303972.1| - 0.25 11.1 2.7 9.1 6.1 0.1 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain UPF0547 PF10571.9 gi|73667957|ref|YP_303972.1| - 0.28 11.3 1.8 23 5.2 0.2 2.5 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.6 gi|73667957|ref|YP_303972.1| - 0.31 10.8 2.7 18 5.2 0.4 2.6 2 0 0 2 2 2 0 zinc-ribbon domain MtrA PF04208.14 gi|73667958|ref|YP_303973.1| - 4.7e-41 140.3 0.2 5.6e-41 140.0 0.2 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A Acetyltransf_10 PF13673.7 gi|73667959|ref|YP_303974.1| - 1.5e-08 34.6 0.0 3.8e-08 33.3 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73667959|ref|YP_303974.1| - 2e-06 28.1 0.0 2.8e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73667959|ref|YP_303974.1| - 4.7e-06 26.8 0.0 6.1e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family NERD PF08378.11 gi|73667960|ref|YP_303975.1| - 4.5e-05 23.9 0.5 0.00014 22.3 0.5 1.8 1 0 0 1 1 1 1 Nuclease-related domain DZR PF12773.7 gi|73667960|ref|YP_303975.1| - 0.0092 16.0 2.1 0.015 15.3 2.1 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|73667960|ref|YP_303975.1| - 0.035 13.5 3.1 0.069 12.6 3.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain TackOD1 PF18551.1 gi|73667960|ref|YP_303975.1| - 0.082 12.6 0.3 0.28 10.8 0.3 1.9 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 zinc_ribbon_2 PF13240.6 gi|73667960|ref|YP_303975.1| - 0.13 12.0 5.1 0.39 10.5 0.3 2.4 1 1 1 2 2 2 0 zinc-ribbon domain zf-C3HC4_2 PF13923.6 gi|73667960|ref|YP_303975.1| - 0.72 9.8 2.5 1.5 8.7 2.5 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) IstB_IS21 PF01695.17 gi|73667961|ref|YP_303976.1| - 3.5e-07 30.1 0.0 5.2e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_22 PF13401.6 gi|73667961|ref|YP_303976.1| - 3.9e-05 23.9 0.1 0.00018 21.8 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73667961|ref|YP_303976.1| - 4.3e-05 23.9 0.1 0.00018 21.9 0.1 2.1 1 1 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 gi|73667961|ref|YP_303976.1| - 0.00041 20.3 0.1 0.0083 16.0 0.1 2.3 1 1 0 1 1 1 1 NACHT domain ATPase_2 PF01637.18 gi|73667961|ref|YP_303976.1| - 0.00078 19.4 1.8 0.0016 18.4 1.4 1.8 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea Bac_DnaA PF00308.18 gi|73667961|ref|YP_303976.1| - 0.0013 18.6 0.1 0.0016 18.3 0.1 1.2 1 0 0 1 1 1 1 Bacterial dnaA protein NB-ARC PF00931.22 gi|73667961|ref|YP_303976.1| - 0.0014 17.8 0.8 0.14 11.3 0.8 2.3 1 1 0 1 1 1 1 NB-ARC domain AAA_14 PF13173.6 gi|73667961|ref|YP_303976.1| - 0.0021 18.1 0.4 0.0056 16.7 0.4 1.7 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|73667961|ref|YP_303976.1| - 0.013 16.0 0.0 0.046 14.1 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|73667961|ref|YP_303976.1| - 0.015 15.2 0.0 0.031 14.2 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 gi|73667961|ref|YP_303976.1| - 0.019 15.0 0.0 0.048 13.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|73667961|ref|YP_303976.1| - 0.036 14.6 0.0 0.078 13.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|73667961|ref|YP_303976.1| - 0.046 14.1 0.1 0.15 12.5 0.1 1.9 1 1 1 2 2 2 0 RNA helicase TPR_12 PF13424.6 gi|73667962|ref|YP_303977.1| - 6.9e-39 132.0 5.0 1.7e-15 57.1 0.2 3.5 2 1 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73667962|ref|YP_303977.1| - 6e-25 85.3 13.8 6.7e-06 25.8 0.1 6.7 7 0 0 7 7 6 4 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73667962|ref|YP_303977.1| - 8.9e-20 69.6 12.3 9.6e-06 25.2 0.2 5.4 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73667962|ref|YP_303977.1| - 1.3e-18 66.2 8.1 1.3e-05 24.9 0.2 5.9 6 1 1 7 7 5 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73667962|ref|YP_303977.1| - 3e-15 55.0 7.6 0.00036 20.4 0.1 5.3 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73667962|ref|YP_303977.1| - 9.3e-15 53.5 17.1 0.002 18.2 0.1 6.3 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73667962|ref|YP_303977.1| - 1.6e-12 46.9 12.5 0.00023 20.8 0.1 5.2 5 0 0 5 5 5 3 TPR repeat TPR_16 PF13432.6 gi|73667962|ref|YP_303977.1| - 3.8e-10 40.2 0.0 3.9e-06 27.4 0.0 3.6 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73667962|ref|YP_303977.1| - 1.2e-09 38.1 0.0 0.017 15.9 0.0 4.6 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73667962|ref|YP_303977.1| - 4.8e-09 36.1 0.1 9.1e-09 35.1 0.1 1.5 1 0 0 1 1 1 1 MalT-like TPR region MIT PF04212.18 gi|73667962|ref|YP_303977.1| - 2.5e-08 33.9 10.6 0.32 11.1 0.0 5.6 5 0 0 5 5 5 4 MIT (microtubule interacting and transport) domain TPR_3 PF07720.12 gi|73667962|ref|YP_303977.1| - 1.3e-07 31.4 10.8 0.021 14.8 0.0 4.3 5 0 0 5 5 3 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73667962|ref|YP_303977.1| - 3.3e-07 30.2 0.1 0.15 12.5 0.0 4.9 4 0 0 4 4 4 1 Tetratricopeptide repeat SNAP PF14938.6 gi|73667962|ref|YP_303977.1| - 2.1e-06 27.4 0.1 0.0058 16.1 0.0 2.5 1 1 0 2 2 2 2 Soluble NSF attachment protein, SNAP SHNi-TPR PF10516.9 gi|73667962|ref|YP_303977.1| - 2.5e-06 26.8 1.4 2.4 7.7 0.0 5.3 5 0 0 5 5 5 1 SHNi-TPR TPR_19 PF14559.6 gi|73667962|ref|YP_303977.1| - 3.2e-06 27.6 2.6 0.00011 22.7 0.7 2.7 1 1 1 2 2 2 2 Tetratricopeptide repeat RPN7 PF10602.9 gi|73667962|ref|YP_303977.1| - 4e-06 26.6 0.4 1.3e-05 25.0 0.1 1.9 2 0 0 2 2 2 1 26S proteasome subunit RPN7 TPR_4 PF07721.14 gi|73667962|ref|YP_303977.1| - 3.5e-05 24.0 0.0 0.82 10.5 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73667962|ref|YP_303977.1| - 8.5e-05 22.9 0.2 12 6.8 0.0 4.3 4 0 0 4 4 3 0 Tetratricopeptide repeat DUF627 PF04781.12 gi|73667962|ref|YP_303977.1| - 0.00051 20.0 0.5 2.7 8.1 0.0 4.3 3 2 0 3 3 3 1 Protein of unknown function (DUF627) ANAPC3 PF12895.7 gi|73667962|ref|YP_303977.1| - 0.00052 20.2 0.6 0.25 11.6 0.1 3.5 1 1 2 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 ComR_TPR PF18710.1 gi|73667962|ref|YP_303977.1| - 0.00054 19.6 3.8 0.48 9.9 0.0 3.6 3 1 1 4 4 4 2 ComR tetratricopeptide Trans_coact PF16805.5 gi|73667962|ref|YP_303977.1| - 0.011 15.8 0.6 0.14 12.3 0.0 2.5 2 0 0 2 2 2 0 Phage late-transcription coactivator Rapsyn_N PF10579.9 gi|73667962|ref|YP_303977.1| - 0.015 15.4 0.9 0.26 11.4 0.1 3.1 1 1 2 3 3 3 0 Rapsyn N-terminal myristoylation and linker region PPR_2 PF13041.6 gi|73667962|ref|YP_303977.1| - 0.092 13.0 0.2 8.9 6.6 0.0 2.9 3 0 0 3 3 2 0 PPR repeat family PPR PF01535.20 gi|73667962|ref|YP_303977.1| - 0.13 12.6 0.0 38 4.9 0.0 4.0 4 0 0 4 4 3 0 PPR repeat TPR_9 PF13371.6 gi|73667962|ref|YP_303977.1| - 0.18 12.0 0.0 20 5.4 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat SPO22 PF08631.10 gi|73667962|ref|YP_303977.1| - 0.74 9.2 3.1 3.8 6.9 0.4 3.2 2 1 1 3 3 3 0 Meiosis protein SPO22/ZIP4 like NHL PF01436.21 gi|73667964|ref|YP_303979.1| - 8.3e-66 214.9 10.3 4.8e-12 45.3 0.1 6.4 6 0 0 6 6 6 6 NHL repeat SGL PF08450.12 gi|73667964|ref|YP_303979.1| - 8.6e-27 94.3 6.2 9.6e-08 31.9 0.3 5.8 1 1 4 5 5 5 5 SMP-30/Gluconolactonase/LRE-like region SBBP PF06739.11 gi|73667964|ref|YP_303979.1| - 2.8e-26 91.2 30.6 0.00011 22.1 1.6 6.7 6 0 0 6 6 6 6 Beta-propeller repeat Phytase-like PF13449.6 gi|73667964|ref|YP_303979.1| - 4.5e-16 59.6 1.0 0.00077 19.5 0.0 6.0 4 2 2 6 6 6 4 Esterase-like activity of phytase DUF5128 PF17170.4 gi|73667964|ref|YP_303979.1| - 1e-13 51.2 9.7 0.00012 21.4 0.9 3.9 2 1 2 4 4 4 4 6-bladed beta-propeller US22 PF02393.16 gi|73667964|ref|YP_303979.1| - 1.4e-07 31.9 0.3 1.6 9.0 0.0 5.8 4 2 2 6 6 6 1 US22 like Reg_prop PF07494.11 gi|73667964|ref|YP_303979.1| - 6.3e-06 25.8 0.4 37 5.0 0.0 6.4 6 0 0 6 6 6 0 Two component regulator propeller SdiA-regulated PF06977.11 gi|73667964|ref|YP_303979.1| - 8.8e-06 25.1 2.8 1.2 8.3 0.0 5.3 6 0 0 6 6 6 1 SdiA-regulated Ntox33 PF15533.6 gi|73667964|ref|YP_303979.1| - 0.00012 22.5 4.7 2.9 8.4 0.0 5.9 6 0 0 6 6 6 1 Bacterial toxin 33 Ldl_recept_b PF00058.17 gi|73667964|ref|YP_303979.1| - 0.0035 17.8 2.4 5.8 7.5 0.1 5.3 8 1 0 8 8 8 1 Low-density lipoprotein receptor repeat class B Cytotoxic PF09000.10 gi|73667964|ref|YP_303979.1| - 0.016 15.5 7.1 29 5.1 0.1 5.0 4 1 1 5 5 5 0 Cytotoxic SNAP-25 PF00835.19 gi|73667964|ref|YP_303979.1| - 0.048 14.0 7.6 6.6 7.1 0.2 4.4 3 2 1 4 4 4 0 SNAP-25 family SUKH-3 PF14433.6 gi|73667964|ref|YP_303979.1| - 0.058 13.9 5.9 41 4.6 0.1 5.4 3 2 3 6 6 6 0 SUKH-3 immunity protein TPR_17 PF13431.6 gi|73667967|ref|YP_303982.1| - 6.7e-20 70.0 1.4 4.6e-06 26.7 0.2 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73667967|ref|YP_303982.1| - 3.2e-18 66.1 5.1 1.7e-09 38.2 0.1 3.0 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73667967|ref|YP_303982.1| - 3.4e-15 55.4 3.6 4.2e-06 26.3 0.2 3.2 1 1 2 3 3 3 3 TPR repeat TPR_8 PF13181.6 gi|73667967|ref|YP_303982.1| - 1e-14 53.4 6.2 2.6e-06 27.2 0.2 4.0 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73667967|ref|YP_303982.1| - 2.2e-14 52.3 8.7 5.2e-05 23.1 0.0 4.0 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73667967|ref|YP_303982.1| - 1.2e-11 44.6 3.1 0.00054 20.1 0.1 2.7 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73667967|ref|YP_303982.1| - 1.6e-11 44.5 2.3 6.6e-05 23.3 0.0 3.0 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73667967|ref|YP_303982.1| - 1.7e-10 40.2 8.9 0.00029 20.5 0.5 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73667967|ref|YP_303982.1| - 4.3e-09 36.5 4.2 0.002 18.4 1.8 2.8 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73667967|ref|YP_303982.1| - 8.7e-08 32.4 1.7 0.0079 16.9 0.0 3.8 1 1 3 4 4 4 2 Tetratricopeptide repeat TPR_20 PF14561.6 gi|73667967|ref|YP_303982.1| - 8e-07 29.3 0.1 0.78 10.1 0.0 3.1 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73667967|ref|YP_303982.1| - 3.6e-05 23.5 3.8 0.39 10.9 0.0 3.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73667967|ref|YP_303982.1| - 6.5e-05 23.3 1.7 3.7 8.4 0.0 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat Pec_lyase_N PF04431.13 gi|73667967|ref|YP_303982.1| - 0.00016 21.9 0.2 5.4 7.3 0.0 3.2 2 1 1 3 3 3 1 Pectate lyase, N terminus ANAPC3 PF12895.7 gi|73667967|ref|YP_303982.1| - 0.00023 21.3 1.3 0.057 13.6 0.1 1.7 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 Coatomer_E PF04733.14 gi|73667967|ref|YP_303982.1| - 0.00037 20.0 0.3 0.052 13.0 0.0 2.2 1 1 1 2 2 2 2 Coatomer epsilon subunit TPR_3 PF07720.12 gi|73667967|ref|YP_303982.1| - 0.00048 20.0 1.3 0.05 13.6 0.1 2.6 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_4 PF07721.14 gi|73667967|ref|YP_303982.1| - 0.0085 16.6 0.0 27 5.8 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF4810 PF16068.5 gi|73667967|ref|YP_303982.1| - 0.04 14.5 2.6 2.4 8.7 0.1 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4810) nos_propeller PF18764.1 gi|73667967|ref|YP_303982.1| - 0.052 13.5 0.0 29 4.7 0.0 2.8 2 1 1 3 3 3 0 Nitrous oxide reductase propeller repeat TPR_10 PF13374.6 gi|73667967|ref|YP_303982.1| - 0.095 12.6 12.6 0.28 11.1 0.1 3.4 4 0 0 4 4 4 0 Tetratricopeptide repeat Bac_luciferase PF00296.20 gi|73667968|ref|YP_303983.1| - 1.2e-55 189.2 0.1 1.5e-55 188.8 0.1 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase GDE_N_bis PF14742.6 gi|73667969|ref|YP_303984.1| - 5.9e-44 150.0 0.0 8.6e-44 149.4 0.0 1.3 1 0 0 1 1 1 1 N-terminal domain of (some) glycogen debranching enzymes GDE_C PF06202.14 gi|73667969|ref|YP_303984.1| - 8.3e-15 54.6 0.0 2.2e-14 53.2 0.0 1.6 1 1 0 1 1 1 1 Amylo-alpha-1,6-glucosidase Glyco_hydro_63 PF03200.16 gi|73667969|ref|YP_303984.1| - 0.00013 20.9 0.3 0.037 12.8 0.1 2.2 1 1 1 2 2 2 2 Glycosyl hydrolase family 63 C-terminal domain Bac_rhamnosid6H PF17389.2 gi|73667969|ref|YP_303984.1| - 0.0045 16.3 0.0 0.0074 15.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glyco_hydro_100 PF12899.7 gi|73667969|ref|YP_303984.1| - 0.018 13.7 0.2 2 7.0 0.1 3.1 2 1 0 2 2 2 0 Alkaline and neutral invertase Glutaredoxin PF00462.24 gi|73667970|ref|YP_303985.1| - 3.2e-09 36.9 0.0 5.5e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 gi|73667970|ref|YP_303985.1| - 0.034 14.5 0.0 0.045 14.2 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Oxidored_FMN PF00724.20 gi|73667971|ref|YP_303986.1| - 1.2e-81 274.7 0.0 1.3e-81 274.5 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family DUF5552 PF17706.1 gi|73667971|ref|YP_303986.1| - 0.02 14.6 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5552) Lyase_1 PF00206.20 gi|73667973|ref|YP_303988.1| - 2.7e-99 332.5 0.0 3.4e-99 332.2 0.0 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 gi|73667973|ref|YP_303988.1| - 1.7e-20 73.2 0.0 4.7e-20 71.7 0.0 1.8 1 0 0 1 1 1 1 Fumarase C C-terminus Methyltransf_11 PF08241.12 gi|73667974|ref|YP_303989.1| - 3.4e-17 62.9 0.0 5.7e-17 62.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73667974|ref|YP_303989.1| - 1.4e-16 60.7 0.0 1.8e-16 60.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73667974|ref|YP_303989.1| - 3.7e-16 59.6 0.1 6.1e-16 58.9 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73667974|ref|YP_303989.1| - 2.3e-15 56.7 0.1 3e-15 56.3 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73667974|ref|YP_303989.1| - 2.2e-11 44.4 0.2 5.1e-11 43.2 0.2 1.7 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|73667974|ref|YP_303989.1| - 7e-08 32.2 0.1 1e-07 31.7 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.18 gi|73667974|ref|YP_303989.1| - 2.2e-06 27.2 0.1 2.8e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|73667974|ref|YP_303989.1| - 5.1e-06 26.1 0.0 7.5e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|73667974|ref|YP_303989.1| - 9.5e-06 25.1 0.0 1.2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.11 gi|73667974|ref|YP_303989.1| - 4.9e-05 22.4 0.0 6.8e-05 21.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) NodS PF05401.11 gi|73667974|ref|YP_303989.1| - 0.00015 21.5 0.0 0.00023 20.8 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) TehB PF03848.14 gi|73667974|ref|YP_303989.1| - 0.00063 19.2 1.0 0.0009 18.7 1.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB FtsJ PF01728.19 gi|73667974|ref|YP_303989.1| - 0.0022 18.1 0.0 0.0033 17.5 0.0 1.5 1 1 0 1 1 1 1 FtsJ-like methyltransferase MetW PF07021.12 gi|73667974|ref|YP_303989.1| - 0.0049 16.5 0.2 0.015 14.9 0.2 1.7 1 1 1 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_15 PF09445.10 gi|73667974|ref|YP_303989.1| - 0.0089 15.6 0.5 0.013 15.1 0.5 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PCMT PF01135.19 gi|73667974|ref|YP_303989.1| - 0.0092 15.7 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Pox_MCEL PF03291.16 gi|73667974|ref|YP_303989.1| - 0.02 14.0 2.1 0.37 9.8 1.5 2.7 1 1 1 2 2 2 0 mRNA capping enzyme DREV PF05219.12 gi|73667974|ref|YP_303989.1| - 0.052 12.6 0.2 0.15 11.1 0.1 1.8 2 1 0 2 2 2 0 DREV methyltransferase Bmt2 PF11968.8 gi|73667974|ref|YP_303989.1| - 0.055 13.3 0.1 0.098 12.5 0.1 1.4 1 1 0 1 1 1 0 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 NNMT_PNMT_TEMT PF01234.17 gi|73667974|ref|YP_303989.1| - 0.11 11.7 0.0 0.64 9.2 0.0 2.1 3 0 0 3 3 3 0 NNMT/PNMT/TEMT family Methyltransf_31 PF13847.6 gi|73667975|ref|YP_303990.1| - 4.9e-23 81.6 0.0 1.1e-22 80.5 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73667975|ref|YP_303990.1| - 7.1e-12 45.9 0.0 1.2e-11 45.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73667975|ref|YP_303990.1| - 2.6e-11 44.0 0.0 4.9e-11 43.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73667975|ref|YP_303990.1| - 1.5e-10 41.7 0.0 2.5e-10 41.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73667975|ref|YP_303990.1| - 5.3e-10 39.4 0.0 1.1e-09 38.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|73667975|ref|YP_303990.1| - 1.3e-05 25.2 0.0 2.2e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73667975|ref|YP_303990.1| - 2.3e-05 24.0 0.0 3.9e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|73667975|ref|YP_303990.1| - 0.00013 21.4 0.0 0.0002 20.8 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|73667975|ref|YP_303990.1| - 0.0015 18.3 0.0 0.014 15.2 0.0 2.2 2 1 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_9 PF08003.11 gi|73667975|ref|YP_303990.1| - 0.0081 15.1 0.0 0.012 14.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) TehB PF03848.14 gi|73667975|ref|YP_303990.1| - 0.017 14.6 0.0 0.029 13.8 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB GCD14 PF08704.10 gi|73667975|ref|YP_303990.1| - 0.028 14.1 0.0 0.055 13.1 0.0 1.5 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit FmrO PF07091.11 gi|73667975|ref|YP_303990.1| - 0.19 11.3 0.0 0.56 9.7 0.0 1.7 2 0 0 2 2 2 0 Ribosomal RNA methyltransferase (FmrO) TrkA_N PF02254.18 gi|73667975|ref|YP_303990.1| - 0.19 12.0 0.0 0.35 11.1 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain TPP_enzyme_N PF02776.18 gi|73667976|ref|YP_303991.1| - 3.1e-50 170.1 0.2 9e-50 168.6 0.0 1.8 2 1 1 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|73667976|ref|YP_303991.1| - 1.2e-42 145.2 0.0 3e-42 144.0 0.0 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|73667976|ref|YP_303991.1| - 2.2e-36 124.6 0.0 3.8e-36 123.9 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain CdhD PF03599.16 gi|73667977|ref|YP_303992.1| - 7.1e-157 522.0 0.2 8.4e-157 521.8 0.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.13 gi|73667977|ref|YP_303992.1| - 1.8e-13 49.9 2.4 4.5e-13 48.6 2.4 1.7 1 0 0 1 1 1 1 Putative Fe-S cluster MOFRL PF05161.13 gi|73667977|ref|YP_303992.1| - 0.063 13.5 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 MOFRL family CdhD PF03599.16 gi|73667978|ref|YP_303993.1| - 3.3e-92 309.2 2.1 2.2e-84 283.4 0.2 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit CbiA PF01656.23 gi|73667979|ref|YP_303994.1| - 7.8e-18 64.8 0.1 1.1e-17 64.2 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|73667979|ref|YP_303994.1| - 8.5e-15 55.1 0.1 1.2e-14 54.6 0.1 1.4 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|73667979|ref|YP_303994.1| - 1.1e-08 34.8 1.4 0.00093 18.7 0.2 2.6 2 2 0 3 3 3 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|73667979|ref|YP_303994.1| - 3.1e-08 33.4 1.1 1.1e-07 31.6 1.1 1.8 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|73667979|ref|YP_303994.1| - 3e-07 29.9 1.2 4.7e-06 26.0 1.2 2.2 1 1 1 2 2 2 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|73667979|ref|YP_303994.1| - 1.6e-05 24.5 0.0 0.023 14.2 0.0 2.5 3 0 0 3 3 3 2 Cellulose biosynthesis protein BcsQ NTPase_1 PF03266.15 gi|73667979|ref|YP_303994.1| - 0.00025 21.0 0.8 0.36 10.7 0.0 2.2 2 0 0 2 2 2 2 NTPase AAA_26 PF13500.6 gi|73667979|ref|YP_303994.1| - 0.00025 20.9 1.4 0.14 12.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|73667979|ref|YP_303994.1| - 0.00033 21.1 0.1 0.00066 20.1 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|73667979|ref|YP_303994.1| - 0.00085 19.1 0.2 0.0026 17.5 0.0 1.8 2 1 0 2 2 2 1 AAA domain Toprim PF01751.22 gi|73667979|ref|YP_303994.1| - 0.00094 19.4 0.5 0.0036 17.5 0.1 2.1 1 1 1 2 2 2 1 Toprim domain AAA_24 PF13479.6 gi|73667979|ref|YP_303994.1| - 0.0015 18.3 0.9 0.016 15.0 0.9 2.2 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 gi|73667979|ref|YP_303994.1| - 0.0034 17.4 0.2 0.0051 16.8 0.1 1.6 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit MipZ PF09140.11 gi|73667979|ref|YP_303994.1| - 0.0075 15.6 0.7 0.45 9.7 0.1 2.3 2 0 0 2 2 2 1 ATPase MipZ APS_kinase PF01583.20 gi|73667979|ref|YP_303994.1| - 0.011 15.6 0.7 0.028 14.3 0.1 1.9 2 0 0 2 2 2 0 Adenylylsulphate kinase Toprim_2 PF13155.6 gi|73667979|ref|YP_303994.1| - 0.011 16.1 0.2 1.1 9.8 0.1 2.3 2 0 0 2 2 2 0 Toprim-like Toprim_4 PF13662.6 gi|73667979|ref|YP_303994.1| - 0.012 16.1 0.1 0.041 14.4 0.0 1.8 2 0 0 2 2 1 0 Toprim domain AAA_19 PF13245.6 gi|73667979|ref|YP_303994.1| - 0.014 15.8 0.4 0.21 11.9 0.0 2.4 2 1 0 2 2 2 0 AAA domain PRK PF00485.18 gi|73667979|ref|YP_303994.1| - 0.016 15.0 0.2 0.12 12.2 0.0 2.1 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family SRP54 PF00448.22 gi|73667979|ref|YP_303994.1| - 0.016 14.8 2.6 0.12 12.0 0.6 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DUF87 PF01935.17 gi|73667979|ref|YP_303994.1| - 0.017 15.2 1.8 0.045 13.8 0.3 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain BORCS6 PF10157.9 gi|73667979|ref|YP_303994.1| - 0.023 14.9 0.1 0.032 14.4 0.1 1.2 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 Helicase_RecD PF05127.14 gi|73667979|ref|YP_303994.1| - 0.05 13.4 0.0 0.097 12.5 0.0 1.6 1 0 0 1 1 1 0 Helicase AAA_22 PF13401.6 gi|73667979|ref|YP_303994.1| - 0.076 13.3 0.1 0.25 11.6 0.0 1.9 2 1 1 3 3 3 0 AAA domain DUF2075 PF09848.9 gi|73667979|ref|YP_303994.1| - 0.082 12.1 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DUF1664 PF07889.12 gi|73667979|ref|YP_303994.1| - 0.096 12.7 0.1 0.18 11.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) ABC_tran PF00005.27 gi|73667979|ref|YP_303994.1| - 0.11 13.0 0.2 0.15 12.5 0.2 1.6 1 1 0 1 1 1 0 ABC transporter Fib_alpha PF08702.10 gi|73667979|ref|YP_303994.1| - 0.12 12.6 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Sigma54_activat PF00158.26 gi|73667979|ref|YP_303994.1| - 0.12 12.1 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain RecA PF00154.21 gi|73667979|ref|YP_303994.1| - 0.13 11.7 1.5 1.8 7.9 0.0 2.3 2 1 0 2 2 2 0 recA bacterial DNA recombination protein TrwB_AAD_bind PF10412.9 gi|73667979|ref|YP_303994.1| - 0.14 11.0 0.2 0.25 10.2 0.2 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain CLP1_P PF16575.5 gi|73667979|ref|YP_303994.1| - 0.15 11.8 0.0 0.35 10.6 0.0 1.6 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_18 PF13238.6 gi|73667979|ref|YP_303994.1| - 0.16 12.6 1.2 0.27 11.8 0.4 2.0 1 1 1 2 2 2 0 AAA domain NACHT PF05729.12 gi|73667979|ref|YP_303994.1| - 0.18 11.7 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain CdhC PF03598.15 gi|73667980|ref|YP_303995.1| - 1.5e-61 206.8 0.2 2.2e-61 206.3 0.2 1.3 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit Nro1 PF12753.7 gi|73667980|ref|YP_303995.1| - 0.085 11.8 3.9 0.39 9.6 0.0 2.1 2 0 0 2 2 2 0 Nuclear pore complex subunit Nro1 E7 PF00527.18 gi|73667980|ref|YP_303995.1| - 3 8.1 5.1 1.8 8.8 0.9 2.2 2 0 0 2 2 2 0 E7 protein, Early protein CO_dh PF02552.16 gi|73667981|ref|YP_303996.1| - 3.5e-30 105.0 0.0 4.2e-30 104.7 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.22 gi|73667981|ref|YP_303996.1| - 3.4e-08 33.3 0.0 5.1e-08 32.7 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Prismane PF03063.20 gi|73667982|ref|YP_303997.1| - 2e-102 343.5 5.3 3.5e-85 286.6 0.2 2.1 2 0 0 2 2 2 2 Prismane/CO dehydrogenase family Fer4_21 PF14697.6 gi|73667982|ref|YP_303997.1| - 3.9e-06 26.9 6.0 3.9e-06 26.9 6.0 2.4 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73667982|ref|YP_303997.1| - 1.5e-05 25.0 9.3 1.5e-05 25.0 9.3 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73667982|ref|YP_303997.1| - 4.3e-05 24.0 7.3 4.3e-05 24.0 7.3 2.6 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73667982|ref|YP_303997.1| - 0.00029 21.2 8.4 0.00029 21.2 8.4 2.4 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73667982|ref|YP_303997.1| - 0.004 16.9 22.8 0.014 15.2 2.4 3.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73667982|ref|YP_303997.1| - 0.0046 17.1 7.0 0.065 13.4 0.2 2.9 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73667982|ref|YP_303997.1| - 0.0097 16.4 1.1 0.0097 16.4 1.1 3.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73667982|ref|YP_303997.1| - 0.032 14.3 26.2 0.044 13.9 2.5 4.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73667982|ref|YP_303997.1| - 0.037 14.6 20.6 0.044 14.3 0.2 3.6 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|73667982|ref|YP_303997.1| - 0.11 13.4 0.6 0.11 13.4 0.6 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain VRR_NUC PF08774.11 gi|73667982|ref|YP_303997.1| - 0.12 12.5 0.0 0.33 11.0 0.0 1.7 1 0 0 1 1 1 0 VRR-NUC domain Glyco_transf_28 PF03033.20 gi|73667982|ref|YP_303997.1| - 0.13 12.3 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain Fer4_6 PF12837.7 gi|73667982|ref|YP_303997.1| - 0.35 11.0 27.3 0.043 13.9 3.3 3.3 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73667982|ref|YP_303997.1| - 0.7 10.0 23.5 0.059 13.5 13.5 3.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73667982|ref|YP_303997.1| - 4.7 7.8 12.0 3.1 8.4 2.0 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I DUF134 PF02001.16 gi|73667983|ref|YP_303998.1| - 3.6e-23 82.0 0.0 5.5e-23 81.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4_2 PF08281.12 gi|73667983|ref|YP_303998.1| - 3.5e-05 23.4 0.1 5.4e-05 22.8 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Zn-ribbon_8 PF09723.10 gi|73667983|ref|YP_303998.1| - 7.1e-05 22.8 0.5 0.00022 21.3 0.5 1.8 1 0 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|73667983|ref|YP_303998.1| - 0.00072 19.6 2.9 0.0014 18.7 2.7 1.7 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HTH_10 PF04967.12 gi|73667983|ref|YP_303998.1| - 0.0011 18.7 0.0 0.0018 18.1 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain HTH_23 PF13384.6 gi|73667983|ref|YP_303998.1| - 0.0038 17.0 0.1 0.0084 15.9 0.1 1.5 1 1 0 1 1 1 1 Homeodomain-like domain zinc_ribbon_9 PF14369.6 gi|73667983|ref|YP_303998.1| - 0.022 15.0 1.2 0.076 13.3 1.2 1.9 1 0 0 1 1 1 0 zinc-ribbon HTH_1 PF00126.27 gi|73667983|ref|YP_303998.1| - 0.022 14.7 0.0 0.036 14.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF3039 PF11238.8 gi|73667983|ref|YP_303998.1| - 0.028 14.2 0.4 0.028 14.2 0.4 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3039) HTH_8 PF02954.19 gi|73667983|ref|YP_303998.1| - 0.035 13.9 0.0 0.062 13.1 0.0 1.5 1 1 0 1 1 1 0 Bacterial regulatory protein, Fis family Sigma70_r4 PF04545.16 gi|73667983|ref|YP_303998.1| - 0.095 12.2 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 TF_Zn_Ribbon PF08271.12 gi|73667983|ref|YP_303998.1| - 0.13 11.8 9.3 1.2 8.7 0.3 3.0 1 1 1 2 2 2 0 TFIIB zinc-binding Sigma70_ECF PF07638.11 gi|73667983|ref|YP_303998.1| - 0.14 12.0 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 ECF sigma factor Enolase_like_N PF18374.1 gi|73667984|ref|YP_303999.1| - 0.0063 15.9 0.2 0.0094 15.3 0.2 1.3 1 0 0 1 1 1 1 Enolase N-terminal domain-like DDE_Tnp_1 PF01609.21 gi|73667985|ref|YP_304000.1| - 3.7e-22 79.0 0.8 4.5e-22 78.8 0.8 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73667985|ref|YP_304000.1| - 0.0044 16.7 0.2 0.18 11.5 0.2 2.3 1 1 0 1 1 1 1 DDE superfamily endonuclease TPP_enzyme_N PF02776.18 gi|73667986|ref|YP_304001.1| - 7.6e-50 168.9 0.0 2.2e-49 167.4 0.0 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|73667986|ref|YP_304001.1| - 1.9e-39 134.9 0.1 1.8e-38 131.8 0.0 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|73667986|ref|YP_304001.1| - 1.4e-28 99.4 0.0 2.5e-28 98.5 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain PHO4 PF01384.20 gi|73667987|ref|YP_304002.1| - 0.037 13.1 7.4 0.013 14.6 3.8 1.7 1 1 1 2 2 2 0 Phosphate transporter family ATP1G1_PLM_MAT8 PF02038.16 gi|73667987|ref|YP_304002.1| - 0.21 11.0 0.7 0.83 9.1 0.6 2.1 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family DUF4181 PF13789.6 gi|73667987|ref|YP_304002.1| - 0.22 11.8 14.6 0.12 12.6 4.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4181) 2TM PF13239.6 gi|73667987|ref|YP_304002.1| - 2.2 8.6 10.3 0.22 11.8 0.8 2.1 2 0 0 2 2 2 0 2TM domain S_4TM PF18159.1 gi|73667987|ref|YP_304002.1| - 3.4 6.9 10.5 0.19 11.0 1.0 2.0 1 1 1 2 2 2 0 SMODS-associating 4TM effector domain FxsA PF04186.13 gi|73667987|ref|YP_304002.1| - 4.5 7.4 12.6 1.3 9.1 5.5 2.4 1 1 1 2 2 2 0 FxsA cytoplasmic membrane protein SUR7 PF06687.12 gi|73667987|ref|YP_304002.1| - 9.7 5.8 9.9 3.3 7.3 7.1 1.6 1 1 1 2 2 2 0 SUR7/PalI family DUF983 PF06170.12 gi|73667987|ref|YP_304002.1| - 9.8 6.7 8.3 19 5.8 2.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF983) ParE_toxin PF05016.15 gi|73667988|ref|YP_304003.1| - 1.2e-06 29.0 0.1 1.5e-06 28.7 0.1 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE HLH PF00010.26 gi|73667988|ref|YP_304003.1| - 0.002 18.1 0.0 0.0021 18.0 0.0 1.3 1 1 0 1 1 1 1 Helix-loop-helix DNA-binding domain Gp49 PF05973.14 gi|73667988|ref|YP_304003.1| - 0.0076 16.4 0.1 0.0084 16.2 0.1 1.1 1 0 0 1 1 1 1 Phage derived protein Gp49-like (DUF891) HigB_toxin PF09907.9 gi|73667988|ref|YP_304003.1| - 0.043 14.0 0.0 0.052 13.8 0.0 1.3 1 0 0 1 1 1 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system tify PF06200.14 gi|73667988|ref|YP_304003.1| - 0.17 11.2 0.1 1.1 8.6 0.0 2.0 2 0 0 2 2 2 0 tify domain DUF4258 PF14076.6 gi|73667989|ref|YP_304004.1| - 4.5e-21 75.0 0.2 6e-21 74.6 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4258) MqsA_antitoxin PF15731.5 gi|73667990|ref|YP_304005.1| - 0.00011 22.4 0.1 0.00013 22.1 0.1 1.1 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA Mut7-C PF01927.16 gi|73667990|ref|YP_304005.1| - 0.0076 16.4 0.0 0.0084 16.2 0.0 1.1 1 0 0 1 1 1 1 Mut7-C RNAse domain Lar_restr_allev PF14354.6 gi|73667990|ref|YP_304005.1| - 0.035 14.5 0.2 0.044 14.2 0.2 1.1 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-FCS PF06467.14 gi|73667990|ref|YP_304005.1| - 0.04 13.9 0.2 2.4 8.2 0.0 2.2 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif YokU PF14122.6 gi|73667990|ref|YP_304005.1| - 0.073 13.1 0.1 0.08 12.9 0.1 1.3 1 0 0 1 1 1 0 YokU-like protein, putative antitoxin YgbA_NO PF11756.8 gi|73667990|ref|YP_304005.1| - 0.078 13.3 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Nitrous oxide-stimulated promoter zf-C4_ClpX PF06689.13 gi|73667990|ref|YP_304005.1| - 4.3 7.3 12.1 1.9e+02 2.0 12.1 2.5 1 1 0 1 1 1 0 ClpX C4-type zinc finger NTP_transf_2 PF01909.23 gi|73667991|ref|YP_304006.1| - 1.4e-16 60.5 0.2 1.7e-16 60.3 0.2 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|73667991|ref|YP_304006.1| - 5.7e-16 58.4 0.0 6.5e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|73667991|ref|YP_304006.1| - 0.0091 16.2 0.0 0.01 16.1 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase beta palm PAC2 PF09754.9 gi|73667991|ref|YP_304006.1| - 0.1 12.6 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 PAC2 family Y1_Tnp PF01797.16 gi|73667992|ref|YP_304007.1| - 2.2e-34 118.2 2.1 3e-34 117.7 2.1 1.2 1 0 0 1 1 1 1 Transposase IS200 like Peptidase_M44 PF03410.13 gi|73667992|ref|YP_304007.1| - 0.016 13.8 0.0 0.019 13.6 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox Na_Ca_ex PF01699.24 gi|73667993|ref|YP_304008.1| - 6.7 6.7 19.0 1.7 8.6 3.1 2.2 1 1 1 2 2 2 0 Sodium/calcium exchanger protein Mrr_cat PF04471.12 gi|73667994|ref|YP_304009.1| - 2e-05 24.6 0.1 4e-05 23.6 0.1 1.4 1 0 0 1 1 1 1 Restriction endonuclease DUF2672 PF10878.8 gi|73667994|ref|YP_304009.1| - 0.62 10.1 3.9 0.82 9.7 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2672) PI3K_rbd PF00794.18 gi|73667995|ref|YP_304010.1| - 0.023 14.9 1.0 0.042 14.0 1.0 1.4 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain SIT PF15330.6 gi|73667995|ref|YP_304010.1| - 0.33 11.4 1.4 1.8 9.0 0.0 2.6 3 0 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT FrhB_FdhB_C PF04432.13 gi|73667996|ref|YP_304011.1| - 4e-41 140.4 0.0 6.2e-41 139.8 0.0 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|73667996|ref|YP_304011.1| - 3e-30 104.2 0.0 5.2e-30 103.4 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Oxidored_q6 PF01058.22 gi|73667997|ref|YP_304012.1| - 1.6e-28 99.1 0.3 1.6e-28 99.1 0.3 2.2 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.27 gi|73667997|ref|YP_304012.1| - 1.8e-12 46.5 15.0 1.7e-07 30.8 2.6 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73667997|ref|YP_304012.1| - 5.2e-08 33.7 9.3 0.0041 18.0 1.3 3.5 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|73667997|ref|YP_304012.1| - 3e-07 30.9 16.6 1e-06 29.2 10.7 3.1 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73667997|ref|YP_304012.1| - 6.5e-07 29.4 20.6 1.5e-05 25.0 11.9 3.8 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73667997|ref|YP_304012.1| - 8.2e-07 29.1 11.3 0.012 15.7 0.3 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73667997|ref|YP_304012.1| - 8.8e-07 29.0 9.9 8.8e-07 29.0 9.9 2.6 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73667997|ref|YP_304012.1| - 2.8e-06 27.1 17.4 0.00071 19.5 2.4 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73667997|ref|YP_304012.1| - 3.4e-06 26.8 16.5 0.0027 17.7 2.4 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73667997|ref|YP_304012.1| - 5.9e-06 26.4 14.8 0.006 17.0 1.6 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73667997|ref|YP_304012.1| - 0.00034 21.1 9.7 0.021 15.4 1.1 3.0 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|73667997|ref|YP_304012.1| - 0.00064 20.1 13.9 0.045 14.2 2.2 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73667997|ref|YP_304012.1| - 0.0095 16.5 17.3 0.61 10.7 4.5 3.4 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73667997|ref|YP_304012.1| - 0.11 12.7 7.1 0.07 13.3 4.5 2.0 2 0 0 2 2 2 0 4Fe-4S dicluster domain sCache_like PF16736.5 gi|73667997|ref|YP_304012.1| - 0.14 12.3 0.7 0.3 11.2 0.7 1.5 1 0 0 1 1 1 0 Single Cache-like Fer4_15 PF13459.6 gi|73667997|ref|YP_304012.1| - 0.24 12.2 14.1 0.34 11.7 0.3 3.6 3 1 1 4 4 3 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|73667997|ref|YP_304012.1| - 0.4 11.5 16.9 1.4 9.9 4.0 3.8 4 0 0 4 4 4 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73667997|ref|YP_304012.1| - 2.1 9.5 26.0 0.63 11.1 8.3 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain HycI PF01750.18 gi|73667998|ref|YP_304013.1| - 9.3e-35 119.3 0.0 1.1e-34 119.1 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease NiFeSe_Hases PF00374.19 gi|73667999|ref|YP_304014.1| - 4.1e-31 108.5 14.1 1.4e-15 57.2 0.6 4.7 2 1 1 3 3 3 3 Nickel-dependent hydrogenase Ribosomal_S19e PF01090.19 gi|73668001|ref|YP_304016.1| - 1.1e-55 187.1 0.1 1.3e-55 186.9 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.13 gi|73668001|ref|YP_304016.1| - 0.015 15.1 0.0 4.7 7.2 0.0 2.5 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain HTH_27 PF13463.6 gi|73668001|ref|YP_304016.1| - 0.05 14.1 0.0 0.64 10.6 0.0 2.2 2 0 0 2 2 2 0 Winged helix DNA-binding domain Ribosomal_S25 PF03297.15 gi|73668001|ref|YP_304016.1| - 0.055 13.7 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 S25 ribosomal protein dsDNA_bind PF01984.20 gi|73668002|ref|YP_304017.1| - 5.7e-29 100.6 19.0 6.4e-29 100.5 19.0 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain cwf18 PF08315.12 gi|73668002|ref|YP_304017.1| - 0.049 14.3 8.7 0.054 14.2 8.7 1.0 1 0 0 1 1 1 0 cwf18 pre-mRNA splicing factor DUF4355 PF14265.6 gi|73668002|ref|YP_304017.1| - 0.094 13.0 11.2 0.033 14.4 8.6 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4355) Octopine_DH PF02317.17 gi|73668002|ref|YP_304017.1| - 0.18 11.9 1.5 1.9 8.5 0.1 1.9 1 1 1 2 2 2 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain MRP-S26 PF14943.6 gi|73668002|ref|YP_304017.1| - 9.1 6.2 13.7 4.2 7.2 11.7 1.5 1 1 0 1 1 1 0 Mitochondrial ribosome subunit S26 Asn_synthase PF00733.21 gi|73668003|ref|YP_304018.1| - 0.00065 19.5 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 gi|73668003|ref|YP_304018.1| - 0.018 14.6 0.0 0.025 14.1 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|73668003|ref|YP_304018.1| - 0.23 10.2 0.1 0.54 9.0 0.1 1.7 1 1 0 1 1 1 0 tRNA methyl transferase Ribosomal_L39 PF00832.20 gi|73668004|ref|YP_304019.1| - 3.3e-20 71.4 9.8 3.8e-20 71.2 9.8 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Ribosomal_L31e PF01198.19 gi|73668005|ref|YP_304020.1| - 1.5e-11 44.4 0.3 1.7e-11 44.2 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e eIF-6 PF01912.18 gi|73668006|ref|YP_304021.1| - 3.1e-66 222.5 3.8 3.6e-66 222.3 3.8 1.0 1 0 0 1 1 1 1 eIF-6 family FluMu_N PF17891.1 gi|73668006|ref|YP_304021.1| - 0.065 13.0 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Mu-like prophage FluMu N-terminal domain Ribosomal_L18A PF01775.17 gi|73668007|ref|YP_304022.1| - 2.6e-14 53.4 1.1 2.7e-14 53.3 1.1 1.0 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A Prefoldin PF02996.17 gi|73668008|ref|YP_304023.1| - 6.2e-29 100.3 5.2 6.2e-29 100.3 5.2 1.4 1 1 1 2 2 2 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|73668008|ref|YP_304023.1| - 4.2e-05 23.4 7.1 0.0021 18.0 1.5 2.3 2 0 0 2 2 2 2 Prefoldin subunit Gp-FAR-1 PF05823.12 gi|73668008|ref|YP_304023.1| - 0.0035 17.7 3.1 0.0067 16.8 0.3 2.0 1 1 1 2 2 2 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) TACC_C PF05010.14 gi|73668008|ref|YP_304023.1| - 0.0082 15.9 5.0 0.012 15.5 5.0 1.3 1 1 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Tropomyosin_1 PF12718.7 gi|73668008|ref|YP_304023.1| - 0.013 15.6 7.5 0.06 13.5 0.8 2.1 2 0 0 2 2 2 0 Tropomyosin like SIKE PF05769.11 gi|73668008|ref|YP_304023.1| - 0.021 14.7 0.5 0.021 14.7 0.5 2.1 2 0 0 2 2 2 0 SIKE family HAUS-augmin3 PF14932.6 gi|73668008|ref|YP_304023.1| - 0.024 14.2 8.0 0.38 10.3 0.8 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 TMPIT PF07851.13 gi|73668008|ref|YP_304023.1| - 0.025 13.9 3.2 0.043 13.1 2.6 1.5 1 1 0 1 1 1 0 TMPIT-like protein UPF0242 PF06785.11 gi|73668008|ref|YP_304023.1| - 0.031 14.4 4.0 0.23 11.6 0.2 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus POX PF07526.11 gi|73668008|ref|YP_304023.1| - 0.039 14.5 3.1 0.056 14.0 0.3 1.8 1 1 1 2 2 2 0 Associated with HOX RasGAP_C PF03836.15 gi|73668008|ref|YP_304023.1| - 0.04 14.1 1.5 6.8 6.8 0.0 2.1 2 0 0 2 2 2 0 RasGAP C-terminus DUF948 PF06103.11 gi|73668008|ref|YP_304023.1| - 0.047 13.9 5.0 0.2 11.9 0.3 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Myc-LZ PF02344.15 gi|73668008|ref|YP_304023.1| - 0.051 13.7 0.1 0.051 13.7 0.1 2.4 3 0 0 3 3 2 0 Myc leucine zipper domain Synaptobrevin PF00957.21 gi|73668008|ref|YP_304023.1| - 0.057 13.2 2.8 0.28 11.0 0.1 2.3 2 0 0 2 2 2 0 Synaptobrevin Sipho_Gp157 PF05565.11 gi|73668008|ref|YP_304023.1| - 0.071 13.1 7.8 0.093 12.7 0.3 2.1 1 1 1 2 2 2 0 Siphovirus Gp157 PseudoU_synth_1 PF01416.20 gi|73668008|ref|YP_304023.1| - 0.072 13.6 0.0 0.11 13.0 0.0 1.4 1 1 0 1 1 1 0 tRNA pseudouridine synthase Seryl_tRNA_N PF02403.22 gi|73668008|ref|YP_304023.1| - 0.074 13.3 8.4 0.32 11.2 0.8 2.3 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain CENP-F_leu_zip PF10473.9 gi|73668008|ref|YP_304023.1| - 0.088 12.8 9.4 0.068 13.2 1.7 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GrpE PF01025.19 gi|73668008|ref|YP_304023.1| - 0.092 12.4 3.7 0.86 9.2 0.1 2.1 2 0 0 2 2 2 0 GrpE Sec3_C_2 PF15278.6 gi|73668008|ref|YP_304023.1| - 0.11 12.8 0.9 11 6.4 0.1 2.2 2 0 0 2 2 2 0 Sec3 exocyst complex subunit DUF4795 PF16043.5 gi|73668008|ref|YP_304023.1| - 0.14 11.8 7.5 1.4 8.5 1.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) YabA PF06156.13 gi|73668008|ref|YP_304023.1| - 0.17 12.6 5.2 1.1 9.9 1.4 2.2 2 0 0 2 2 2 0 Initiation control protein YabA DHR10 PF18595.1 gi|73668008|ref|YP_304023.1| - 0.19 11.8 10.6 0.86 9.7 1.4 2.4 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain TSC22 PF01166.18 gi|73668008|ref|YP_304023.1| - 0.22 11.8 5.2 0.49 10.7 0.1 2.6 2 1 0 2 2 2 0 TSC-22/dip/bun family Spc7 PF08317.11 gi|73668008|ref|YP_304023.1| - 0.27 10.1 12.3 0.4 9.5 3.5 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF5320 PF17253.2 gi|73668008|ref|YP_304023.1| - 0.33 12.0 2.4 5 8.3 0.0 2.5 3 0 0 3 3 2 0 Family of unknown function (DUF5320) Rx_N PF18052.1 gi|73668008|ref|YP_304023.1| - 0.81 10.0 4.0 1.8 8.9 0.1 2.3 2 1 0 2 2 2 0 Rx N-terminal domain ADIP PF11559.8 gi|73668008|ref|YP_304023.1| - 0.95 9.5 8.4 5.2 7.2 1.5 2.2 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding APG6_N PF17675.1 gi|73668008|ref|YP_304023.1| - 2.3 8.7 12.5 1.2 9.7 5.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region ZapB PF06005.12 gi|73668008|ref|YP_304023.1| - 4.7 7.7 11.9 1.9 9.0 0.9 2.8 2 1 0 2 2 2 0 Cell division protein ZapB BLOC1_2 PF10046.9 gi|73668008|ref|YP_304023.1| - 4.8 7.5 9.0 7.8 6.9 1.0 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CENP-Q PF13094.6 gi|73668008|ref|YP_304023.1| - 4.8 7.3 9.4 2.2 8.4 4.1 1.9 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit SRP54 PF00448.22 gi|73668009|ref|YP_304024.1| - 7.2e-71 237.9 0.1 1.1e-70 237.3 0.1 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|73668009|ref|YP_304024.1| - 7.3e-09 35.7 0.6 7.3e-09 35.7 0.6 2.6 3 0 0 3 3 2 1 SRP54-type protein, helical bundle domain Zeta_toxin PF06414.12 gi|73668009|ref|YP_304024.1| - 0.00025 20.4 0.0 0.0005 19.4 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_30 PF13604.6 gi|73668009|ref|YP_304024.1| - 0.00031 20.5 0.1 0.00069 19.4 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|73668009|ref|YP_304024.1| - 0.00037 20.9 0.2 0.0011 19.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain DUF5452 PF17533.2 gi|73668009|ref|YP_304024.1| - 0.0013 18.8 0.0 0.0025 17.9 0.0 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5452) APS_kinase PF01583.20 gi|73668009|ref|YP_304024.1| - 0.0015 18.5 0.0 0.0027 17.6 0.0 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase Thymidylate_kin PF02223.17 gi|73668009|ref|YP_304024.1| - 0.0047 16.6 0.0 0.14 11.8 0.0 2.7 2 0 0 2 2 2 1 Thymidylate kinase AAA_16 PF13191.6 gi|73668009|ref|YP_304024.1| - 0.006 17.0 0.0 0.022 15.2 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|73668009|ref|YP_304024.1| - 0.011 16.1 0.0 0.03 14.6 0.0 1.7 1 1 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|73668009|ref|YP_304024.1| - 0.019 15.0 0.7 0.033 14.2 0.0 1.8 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_7 PF12775.7 gi|73668009|ref|YP_304024.1| - 0.025 14.1 0.0 0.049 13.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 gi|73668009|ref|YP_304024.1| - 0.029 14.5 0.1 0.19 11.8 0.1 2.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF262 PF03235.14 gi|73668009|ref|YP_304024.1| - 0.036 14.3 1.0 0.055 13.6 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF262 AAA PF00004.29 gi|73668009|ref|YP_304024.1| - 0.044 14.2 0.0 0.16 12.4 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|73668009|ref|YP_304024.1| - 0.058 13.6 0.1 0.17 12.2 0.1 1.9 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|73668009|ref|YP_304024.1| - 0.12 12.9 0.1 0.37 11.3 0.0 1.9 2 1 0 2 2 2 0 ABC transporter Methyltransf_11 PF08241.12 gi|73668010|ref|YP_304025.1| - 3.2e-27 95.0 0.0 6e-27 94.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668010|ref|YP_304025.1| - 3.1e-24 85.5 0.0 1.1e-23 83.8 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668010|ref|YP_304025.1| - 7e-22 77.9 0.0 1.7e-21 76.6 0.0 1.7 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73668010|ref|YP_304025.1| - 3.6e-21 75.7 0.0 5.4e-21 75.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668010|ref|YP_304025.1| - 1.1e-16 61.4 0.0 2.1e-16 60.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668010|ref|YP_304025.1| - 2.7e-16 59.6 0.0 9.3e-16 57.9 0.0 1.7 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_9 PF08003.11 gi|73668010|ref|YP_304025.1| - 7.6e-08 31.6 0.0 1.8e-06 27.2 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1698) MetW PF07021.12 gi|73668010|ref|YP_304025.1| - 1.5e-06 27.9 0.0 3.2e-06 26.9 0.0 1.5 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW NodS PF05401.11 gi|73668010|ref|YP_304025.1| - 3.2e-06 26.9 0.0 4.2e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|73668010|ref|YP_304025.1| - 1.2e-05 25.0 0.0 6.2e-05 22.6 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase small domain DREV PF05219.12 gi|73668010|ref|YP_304025.1| - 2.1e-05 23.7 0.0 3.3e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase TehB PF03848.14 gi|73668010|ref|YP_304025.1| - 0.0001 21.8 0.0 0.00016 21.2 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB CMAS PF02353.20 gi|73668010|ref|YP_304025.1| - 0.00015 21.1 0.0 0.00026 20.4 0.0 1.5 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_2 PF00891.18 gi|73668010|ref|YP_304025.1| - 0.00019 20.8 0.0 0.00026 20.4 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_32 PF13679.6 gi|73668010|ref|YP_304025.1| - 0.00044 20.3 0.0 0.00076 19.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|73668010|ref|YP_304025.1| - 0.00086 19.0 0.0 0.0023 17.6 0.0 1.8 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) CheR PF01739.18 gi|73668010|ref|YP_304025.1| - 0.0014 18.2 0.0 0.69 9.4 0.0 2.7 1 1 1 2 2 2 2 CheR methyltransferase, SAM binding domain PCMT PF01135.19 gi|73668010|ref|YP_304025.1| - 0.0017 18.1 0.0 0.0042 16.9 0.0 1.6 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|73668010|ref|YP_304025.1| - 0.0059 16.7 0.0 0.012 15.7 0.0 1.5 1 1 1 2 2 2 1 FtsJ-like methyltransferase AdoMet_MTase PF07757.13 gi|73668010|ref|YP_304025.1| - 0.0067 16.8 0.0 0.015 15.6 0.0 1.6 1 0 0 1 1 1 1 Predicted AdoMet-dependent methyltransferase PrmA PF06325.13 gi|73668010|ref|YP_304025.1| - 0.0082 15.6 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.20 gi|73668010|ref|YP_304025.1| - 0.013 14.6 0.0 0.023 13.8 0.0 1.4 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase N2227 PF07942.12 gi|73668010|ref|YP_304025.1| - 0.015 14.5 0.0 1.3 8.1 0.0 2.3 1 1 1 2 2 2 0 N2227-like protein POR PF01558.18 gi|73668010|ref|YP_304025.1| - 0.076 13.1 0.0 0.098 12.7 0.0 1.3 1 0 0 1 1 1 0 Pyruvate ferredoxin/flavodoxin oxidoreductase Methyltransf_11 PF08241.12 gi|73668011|ref|YP_304026.1| - 2e-28 98.9 0.0 2.9e-28 98.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668011|ref|YP_304026.1| - 8.2e-26 90.5 0.0 1.2e-25 90.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668011|ref|YP_304026.1| - 3.5e-21 75.6 0.0 4e-21 75.4 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|73668011|ref|YP_304026.1| - 7.7e-20 71.2 0.0 9.2e-20 71.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73668011|ref|YP_304026.1| - 1.1e-16 61.1 0.0 1.8e-16 60.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668011|ref|YP_304026.1| - 4.2e-15 56.3 0.0 6.3e-15 55.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|73668011|ref|YP_304026.1| - 1.8e-09 37.3 0.0 2.4e-09 36.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB NodS PF05401.11 gi|73668011|ref|YP_304026.1| - 2.2e-07 30.7 0.0 3.1e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|73668011|ref|YP_304026.1| - 2.9e-07 30.2 0.0 4.2e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|73668011|ref|YP_304026.1| - 4.4e-06 26.4 0.0 7e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|73668011|ref|YP_304026.1| - 1.8e-05 24.3 0.0 2.5e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) GidB PF02527.15 gi|73668011|ref|YP_304026.1| - 0.00013 21.3 0.1 0.00042 19.7 0.1 1.7 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G DREV PF05219.12 gi|73668011|ref|YP_304026.1| - 0.0002 20.6 0.0 0.0003 20.0 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase RrnaAD PF00398.20 gi|73668011|ref|YP_304026.1| - 0.00045 19.4 0.0 0.00069 18.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_16 PF10294.9 gi|73668011|ref|YP_304026.1| - 0.00052 19.8 0.0 0.001 18.8 0.0 1.5 2 0 0 2 2 1 1 Lysine methyltransferase Methyltransf_32 PF13679.6 gi|73668011|ref|YP_304026.1| - 0.0013 18.8 0.0 0.0018 18.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|73668011|ref|YP_304026.1| - 0.0021 17.9 0.0 0.0042 16.9 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.7 gi|73668011|ref|YP_304026.1| - 0.0049 16.8 0.0 0.0082 16.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Mur_ligase PF01225.25 gi|73668011|ref|YP_304026.1| - 0.011 16.0 0.0 0.02 15.2 0.0 1.4 1 0 0 1 1 1 0 Mur ligase family, catalytic domain adh_short PF00106.25 gi|73668011|ref|YP_304026.1| - 0.014 14.8 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase Rsm22 PF09243.10 gi|73668011|ref|YP_304026.1| - 0.017 14.4 0.0 0.027 13.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 ADH_zinc_N PF00107.26 gi|73668011|ref|YP_304026.1| - 0.061 13.3 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase CMAS PF02353.20 gi|73668011|ref|YP_304026.1| - 0.067 12.5 0.0 0.13 11.5 0.0 1.5 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_29 PF03141.16 gi|73668011|ref|YP_304026.1| - 0.086 11.4 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase DUF43 PF01861.16 gi|73668011|ref|YP_304026.1| - 0.097 11.9 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain CheR PF01739.18 gi|73668011|ref|YP_304026.1| - 0.1 12.1 0.0 1.2 8.6 0.0 2.0 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain adh_short_C2 PF13561.6 gi|73668011|ref|YP_304026.1| - 0.13 11.8 0.0 0.24 10.9 0.0 1.4 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Methyltransf_24 PF13578.6 gi|73668011|ref|YP_304026.1| - 0.13 13.3 0.1 0.43 11.6 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain ABC_tran PF00005.27 gi|73668012|ref|YP_304027.1| - 2.1e-29 102.8 0.2 4e-29 101.9 0.2 1.4 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.6 gi|73668012|ref|YP_304027.1| - 3.5e-14 53.3 1.2 1e-06 28.8 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|73668012|ref|YP_304027.1| - 5.5e-07 30.3 0.0 6.5e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|73668012|ref|YP_304027.1| - 5.7e-07 29.6 1.1 0.0012 18.7 0.0 2.1 1 1 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 gi|73668012|ref|YP_304027.1| - 6.3e-07 29.1 0.8 1.3e-05 24.8 0.8 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73668012|ref|YP_304027.1| - 0.00017 21.3 0.0 0.00036 20.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 gi|73668012|ref|YP_304027.1| - 0.00034 19.6 0.9 0.057 12.2 0.1 2.9 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_14 PF13173.6 gi|73668012|ref|YP_304027.1| - 0.0099 15.9 0.1 0.13 12.3 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|73668012|ref|YP_304027.1| - 0.011 16.0 0.1 0.021 15.1 0.1 1.4 1 1 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 gi|73668012|ref|YP_304027.1| - 0.014 14.2 0.2 0.1 11.3 0.1 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein HSM3_N PF18795.1 gi|73668012|ref|YP_304027.1| - 0.018 14.4 0.1 0.031 13.7 0.1 1.3 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, N terminal domain ATPase_2 PF01637.18 gi|73668012|ref|YP_304027.1| - 0.021 14.7 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|73668012|ref|YP_304027.1| - 0.025 15.0 0.0 0.031 14.7 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|73668012|ref|YP_304027.1| - 0.029 14.8 0.7 0.24 11.8 0.7 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|73668012|ref|YP_304027.1| - 0.043 13.7 0.1 0.087 12.7 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 gi|73668012|ref|YP_304027.1| - 0.057 13.5 0.0 0.12 12.5 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF2813 PF11398.8 gi|73668012|ref|YP_304027.1| - 0.13 11.5 0.0 0.25 10.5 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) FecCD PF01032.18 gi|73668013|ref|YP_304028.1| - 1.7e-88 296.6 35.3 2.2e-88 296.3 35.3 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|73668013|ref|YP_304028.1| - 2e-07 30.8 20.2 2e-07 30.8 20.2 1.6 1 1 0 1 1 1 1 ABC 3 transport family Peripla_BP_2 PF01497.18 gi|73668014|ref|YP_304029.1| - 8.3e-32 110.6 0.0 1.1e-31 110.3 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_4 PF13407.6 gi|73668014|ref|YP_304029.1| - 0.0025 17.4 0.0 0.004 16.8 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain DUF2206 PF09971.9 gi|73668014|ref|YP_304029.1| - 0.1 11.3 0.0 0.15 10.8 0.0 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) Methyltransf_11 PF08241.12 gi|73668015|ref|YP_304030.1| - 3.7e-24 85.2 0.0 6.1e-24 84.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668015|ref|YP_304030.1| - 7.7e-23 81.0 0.0 1.2e-22 80.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668015|ref|YP_304030.1| - 7.7e-20 71.2 0.0 1e-19 70.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73668015|ref|YP_304030.1| - 4e-16 59.3 0.0 5.4e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668015|ref|YP_304030.1| - 1.3e-13 50.8 0.0 1.8e-13 50.4 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|73668015|ref|YP_304030.1| - 1.2e-11 45.2 0.0 1.8e-11 44.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73668015|ref|YP_304030.1| - 1.5e-05 24.6 0.0 2.4e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|73668015|ref|YP_304030.1| - 4.3e-05 23.1 0.0 6.2e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_29 PF03141.16 gi|73668015|ref|YP_304030.1| - 5.3e-05 22.0 0.0 6.7e-05 21.6 0.0 1.2 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase NodS PF05401.11 gi|73668015|ref|YP_304030.1| - 0.00017 21.3 0.0 0.00024 20.8 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) DREV PF05219.12 gi|73668015|ref|YP_304030.1| - 0.00037 19.7 0.0 0.00052 19.2 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase PCMT PF01135.19 gi|73668015|ref|YP_304030.1| - 0.0053 16.5 0.0 0.014 15.2 0.0 1.7 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GidB PF02527.15 gi|73668015|ref|YP_304030.1| - 0.008 15.5 0.0 0.012 15.0 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_32 PF13679.6 gi|73668015|ref|YP_304030.1| - 0.013 15.5 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 gi|73668015|ref|YP_304030.1| - 0.027 13.9 0.0 0.036 13.5 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB CheR PF01739.18 gi|73668015|ref|YP_304030.1| - 0.028 13.9 0.0 0.13 11.7 0.0 2.0 1 1 0 1 1 1 0 CheR methyltransferase, SAM binding domain Methyltransf_18 PF12847.7 gi|73668015|ref|YP_304030.1| - 0.041 13.8 0.0 0.06 13.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 gi|73668015|ref|YP_304030.1| - 0.081 12.0 0.0 0.12 11.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase BPD_transp_1 PF00528.22 gi|73668016|ref|YP_304031.1| - 4.1e-43 147.3 7.2 4.1e-43 147.3 7.2 1.8 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component EI24 PF07264.11 gi|73668016|ref|YP_304031.1| - 0.00051 20.3 0.1 0.0029 17.9 0.1 2.1 1 1 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) DUF2070 PF09843.9 gi|73668016|ref|YP_304031.1| - 0.064 11.5 5.1 0.084 11.1 5.1 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TOM13 PF08219.11 gi|73668016|ref|YP_304031.1| - 0.11 12.5 0.1 0.25 11.3 0.1 1.6 1 0 0 1 1 1 0 Outer membrane protein TOM13 Renin_r PF07850.14 gi|73668016|ref|YP_304031.1| - 0.7 10.5 5.6 0.96 10.1 0.4 2.7 3 0 0 3 3 3 0 Renin receptor-like protein BPD_transp_1 PF00528.22 gi|73668017|ref|YP_304032.1| - 9.1e-29 100.5 13.1 9.1e-29 100.5 13.1 2.1 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|73668017|ref|YP_304032.1| - 0.00014 21.7 1.1 0.00014 21.7 1.1 3.7 5 1 0 5 5 5 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 gi|73668018|ref|YP_304033.1| - 2.2e-24 86.5 0.0 3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|73668018|ref|YP_304033.1| - 6e-06 25.8 0.3 2.6e-05 23.8 0.3 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73668018|ref|YP_304033.1| - 8.2e-06 25.8 0.7 0.027 14.3 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system oligo_HPY PF08352.12 gi|73668018|ref|YP_304033.1| - 0.00017 22.1 0.0 0.0003 21.2 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|73668018|ref|YP_304033.1| - 0.0011 19.3 0.4 0.028 14.7 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|73668018|ref|YP_304033.1| - 0.0013 18.4 0.1 0.0028 17.4 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|73668018|ref|YP_304033.1| - 0.002 18.6 0.4 0.09 13.2 0.1 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|73668018|ref|YP_304033.1| - 0.0024 17.5 1.2 0.13 11.9 0.2 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|73668018|ref|YP_304033.1| - 0.0049 17.3 0.0 0.0075 16.7 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73668018|ref|YP_304033.1| - 0.017 15.0 0.1 0.029 14.3 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_7 PF12775.7 gi|73668018|ref|YP_304033.1| - 0.11 12.0 0.0 0.26 10.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_23 PF13476.6 gi|73668018|ref|YP_304033.1| - 0.2 12.1 0.0 0.35 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|73668019|ref|YP_304034.1| - 1.6e-31 109.6 0.1 2.5e-31 109.0 0.1 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|73668019|ref|YP_304034.1| - 6.3e-09 36.2 2.8 1.2e-08 35.3 2.8 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|73668019|ref|YP_304034.1| - 3.8e-07 30.2 0.2 0.0025 17.7 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668019|ref|YP_304034.1| - 0.00021 20.8 0.0 0.00033 20.2 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|73668019|ref|YP_304034.1| - 0.0008 19.7 0.4 0.0061 16.8 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73668019|ref|YP_304034.1| - 0.0057 16.4 0.4 0.011 15.4 0.4 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.6 gi|73668019|ref|YP_304034.1| - 0.0057 15.4 0.8 0.089 11.4 0.0 2.3 2 1 0 2 2 2 1 AAA domain G-alpha PF00503.20 gi|73668019|ref|YP_304034.1| - 0.0095 15.1 0.4 0.019 14.2 0.4 1.5 1 1 0 1 1 1 1 G-protein alpha subunit RsgA_GTPase PF03193.16 gi|73668019|ref|YP_304034.1| - 0.035 14.0 1.0 0.07 13.0 0.3 1.8 2 0 0 2 2 2 0 RsgA GTPase AAA_16 PF13191.6 gi|73668019|ref|YP_304034.1| - 0.047 14.1 0.5 0.095 13.1 0.5 1.7 1 1 0 1 1 1 0 AAA ATPase domain DLIC PF05783.11 gi|73668019|ref|YP_304034.1| - 0.089 11.6 0.2 0.13 11.1 0.2 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) MMR_HSR1 PF01926.23 gi|73668019|ref|YP_304034.1| - 0.12 12.5 0.3 0.4 10.8 0.1 2.0 2 1 0 2 2 2 0 50S ribosome-binding GTPase SBP_bac_5 PF00496.22 gi|73668020|ref|YP_304035.1| - 1.1e-90 304.3 1.0 1.4e-90 304.0 1.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Pilus_CpaD PF09476.10 gi|73668020|ref|YP_304035.1| - 0.0028 17.4 0.2 0.0043 16.8 0.2 1.2 1 0 0 1 1 1 1 Pilus biogenesis CpaD protein (pilus_cpaD) Methyltransf_11 PF08241.12 gi|73668021|ref|YP_304036.1| - 1.4e-16 60.9 0.0 2.3e-16 60.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668021|ref|YP_304036.1| - 1.7e-15 57.5 0.0 4e-15 56.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668021|ref|YP_304036.1| - 3e-15 56.3 0.0 4.4e-15 55.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73668021|ref|YP_304036.1| - 1.1e-11 44.9 0.0 1.5e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668021|ref|YP_304036.1| - 2.1e-09 38.0 0.1 8.5e-09 36.1 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|73668021|ref|YP_304036.1| - 2.5e-08 33.7 0.0 4.2e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|73668021|ref|YP_304036.1| - 4.3e-07 29.8 0.0 5.6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) TehB PF03848.14 gi|73668021|ref|YP_304036.1| - 1.1e-05 24.9 0.0 1.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB PCMT PF01135.19 gi|73668021|ref|YP_304036.1| - 5.1e-05 23.1 0.0 7.4e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GidB PF02527.15 gi|73668021|ref|YP_304036.1| - 5.7e-05 22.5 0.1 0.00032 20.1 0.1 2.1 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G PrmA PF06325.13 gi|73668021|ref|YP_304036.1| - 0.00012 21.6 0.0 0.00016 21.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|73668021|ref|YP_304036.1| - 0.0004 20.3 0.0 0.00068 19.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668021|ref|YP_304036.1| - 0.00049 19.5 0.1 0.0008 18.8 0.1 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family RrnaAD PF00398.20 gi|73668021|ref|YP_304036.1| - 0.00073 18.7 0.1 0.0011 18.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_32 PF13679.6 gi|73668021|ref|YP_304036.1| - 0.0021 18.1 0.0 0.0026 17.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|73668021|ref|YP_304036.1| - 0.003 17.3 0.0 0.0042 16.9 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_9 PF08003.11 gi|73668021|ref|YP_304036.1| - 0.0089 15.0 0.0 0.014 14.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) tRNA_U5-meth_tr PF05958.11 gi|73668021|ref|YP_304036.1| - 0.014 14.4 0.0 0.035 13.1 0.0 1.6 2 0 0 2 2 2 0 tRNA (Uracil-5-)-methyltransferase FtsJ PF01728.19 gi|73668021|ref|YP_304036.1| - 0.016 15.3 0.0 0.028 14.6 0.0 1.7 1 1 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_4 PF02390.17 gi|73668021|ref|YP_304036.1| - 0.076 12.5 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 Putative methyltransferase PspC PF04024.12 gi|73668022|ref|YP_304037.1| - 2.8e-26 91.1 1.2 3e-26 91.0 1.2 1.0 1 0 0 1 1 1 1 PspC domain Hexapep PF00132.24 gi|73668023|ref|YP_304038.1| - 9.1e-09 34.7 12.0 2.3e-05 23.9 4.1 2.4 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73668023|ref|YP_304038.1| - 6.6e-05 22.6 11.5 0.0024 17.6 4.4 2.6 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase DUF1735 PF08522.10 gi|73668024|ref|YP_304039.1| - 0.0056 17.3 2.0 0.025 15.2 0.2 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1735) CARDB PF07705.11 gi|73668024|ref|YP_304039.1| - 0.062 13.6 0.4 0.11 12.7 0.4 1.4 1 0 0 1 1 1 0 CARDB DUF1722 PF08349.11 gi|73668025|ref|YP_304040.1| - 1.9e-40 137.8 0.4 3.4e-40 137.0 0.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) DUF523 PF04463.12 gi|73668025|ref|YP_304040.1| - 4.9e-33 114.1 0.0 7.9e-33 113.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF523) AhpC-TSA PF00578.21 gi|73668026|ref|YP_304041.1| - 8.5e-34 116.1 0.1 1.4e-33 115.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|73668026|ref|YP_304041.1| - 3.7e-15 55.9 0.0 4.9e-15 55.5 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|73668026|ref|YP_304041.1| - 3.2e-13 49.3 1.1 1.7e-12 47.0 0.6 2.1 2 0 0 2 2 2 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 gi|73668026|ref|YP_304041.1| - 0.014 15.3 0.7 0.024 14.6 0.0 1.7 3 0 0 3 3 3 0 SCO1/SenC P_C10 PF14974.6 gi|73668026|ref|YP_304041.1| - 0.015 15.4 0.2 0.032 14.3 0.1 1.7 2 0 0 2 2 2 0 Protein C10 DUF2375 PF09558.10 gi|73668026|ref|YP_304041.1| - 0.039 14.0 0.0 0.14 12.2 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2375) P5CR_dimer PF14748.6 gi|73668027|ref|YP_304042.1| - 1.7e-39 134.2 2.4 3.6e-39 133.2 2.4 1.6 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 gi|73668027|ref|YP_304042.1| - 6.2e-20 71.6 0.6 1.8e-19 70.1 0.6 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|73668027|ref|YP_304042.1| - 4e-06 27.1 0.7 9.2e-06 25.9 0.7 1.7 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|73668027|ref|YP_304042.1| - 0.00025 21.1 3.0 0.0035 17.3 3.0 2.3 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PDH PF02153.17 gi|73668027|ref|YP_304042.1| - 0.06 12.3 0.2 0.1 11.6 0.2 1.6 1 1 0 1 1 1 0 Prephenate dehydrogenase Sacchrp_dh_C PF16653.5 gi|73668027|ref|YP_304042.1| - 0.074 13.1 0.7 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 Saccharopine dehydrogenase C-terminal domain AA_kinase PF00696.28 gi|73668028|ref|YP_304043.1| - 1.7e-44 152.2 0.1 2.3e-44 151.8 0.1 1.2 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 gi|73668028|ref|YP_304043.1| - 3.9e-19 68.4 0.8 3.9e-19 68.4 0.8 1.8 2 0 0 2 2 2 1 PUA domain Aldedh PF00171.22 gi|73668029|ref|YP_304044.1| - 9.2e-18 64.0 0.4 2.6e-13 49.3 0.1 2.3 2 1 0 2 2 2 2 Aldehyde dehydrogenase family FlgN PF05130.12 gi|73668029|ref|YP_304044.1| - 0.03 14.9 1.0 0.062 13.8 1.0 1.5 1 0 0 1 1 1 0 FlgN protein MAT1 PF06391.13 gi|73668029|ref|YP_304044.1| - 0.12 12.2 0.9 0.19 11.5 0.9 1.2 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 DUF356 PF04009.12 gi|73668030|ref|YP_304045.1| - 3.8e-43 146.1 0.1 4.7e-43 145.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF356) Toprim_4 PF13662.6 gi|73668031|ref|YP_304046.1| - 1.6e-06 28.5 0.0 4.2e-06 27.1 0.0 1.7 1 1 0 1 1 1 1 Toprim domain Toprim PF01751.22 gi|73668031|ref|YP_304046.1| - 6.3e-05 23.2 0.0 0.0012 19.1 0.0 2.3 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|73668031|ref|YP_304046.1| - 0.0016 18.8 0.0 0.0026 18.1 0.0 1.4 1 0 0 1 1 1 1 Toprim-like DUF167 PF02594.16 gi|73668032|ref|YP_304047.1| - 2e-20 72.7 0.1 2.4e-20 72.4 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 DUF1966 PF09260.11 gi|73668032|ref|YP_304047.1| - 0.066 13.5 0.4 0.77 10.1 0.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1966) DUF2805 PF10985.8 gi|73668032|ref|YP_304047.1| - 0.096 13.1 0.0 0.16 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2805) Amidohydro_1 PF01979.20 gi|73668033|ref|YP_304048.1| - 2.3e-29 102.8 0.9 3.4e-28 99.0 0.9 1.9 1 1 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.22 gi|73668033|ref|YP_304048.1| - 1e-08 34.9 0.0 2e-08 34.0 0.0 1.4 2 0 0 2 2 2 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.11 gi|73668033|ref|YP_304048.1| - 1.6e-08 34.5 0.0 2.7e-07 30.5 0.0 2.3 2 1 0 2 2 2 1 Amidohydrolase family Peripla_BP_2 PF01497.18 gi|73668033|ref|YP_304048.1| - 0.05 13.1 0.0 0.077 12.5 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein CRM1_repeat PF18777.1 gi|73668033|ref|YP_304048.1| - 0.07 12.7 0.2 0.14 11.7 0.2 1.4 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat Usp PF00582.26 gi|73668034|ref|YP_304049.1| - 1.8e-36 125.7 0.0 2.1e-36 125.5 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Aldo_ket_red PF00248.21 gi|73668034|ref|YP_304049.1| - 0.1 11.8 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Aldo/keto reductase family CBS PF00571.28 gi|73668035|ref|YP_304050.1| - 8.5e-44 147.8 13.3 2.8e-13 50.1 0.2 4.2 4 0 0 4 4 4 4 CBS domain GAF PF01590.26 gi|73668035|ref|YP_304050.1| - 0.021 15.5 0.2 6.7 7.4 0.0 2.9 2 1 1 3 3 3 0 GAF domain Peptidase_S55 PF05580.12 gi|73668035|ref|YP_304050.1| - 0.036 14.0 0.4 1 9.2 0.0 2.3 2 0 0 2 2 2 0 SpoIVB peptidase S55 H_kinase_N PF12282.8 gi|73668035|ref|YP_304050.1| - 0.064 13.2 0.4 2.4 8.1 0.0 2.5 2 1 0 2 2 2 0 Signal transduction histidine kinase RibD_C PF01872.17 gi|73668036|ref|YP_304051.1| - 2.8e-57 193.8 0.1 3.2e-57 193.6 0.1 1.0 1 0 0 1 1 1 1 RibD C-terminal domain DUF934 PF06073.12 gi|73668036|ref|YP_304051.1| - 0.078 12.9 0.0 0.21 11.5 0.0 1.7 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF934) ATC_hydrolase PF14196.6 gi|73668037|ref|YP_304052.1| - 0.00055 20.7 0.0 0.00074 20.3 0.0 1.2 1 0 0 1 1 1 1 L-2-amino-thiazoline-4-carboxylic acid hydrolase CxxCxxCC PF03692.15 gi|73668038|ref|YP_304053.1| - 2.9e-10 40.7 2.7 9.3e-10 39.1 2.7 1.8 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain DUF5350 PF17299.2 gi|73668039|ref|YP_304054.1| - 8.4e-28 96.6 5.9 9e-28 96.5 5.9 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5350) CRCB PF02537.15 gi|73668040|ref|YP_304055.1| - 8.9e-23 80.4 7.1 1.1e-22 80.2 7.1 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) DUF3938 PF13074.6 gi|73668040|ref|YP_304055.1| - 0.051 13.8 6.0 0.098 12.9 2.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3938) TetR_C_19 PF17924.1 gi|73668040|ref|YP_304055.1| - 0.18 12.4 0.9 0.25 11.9 0.9 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CRCB PF02537.15 gi|73668041|ref|YP_304056.1| - 5.2e-18 65.2 9.7 6.3e-18 64.9 9.7 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) MoeA_N PF03453.17 gi|73668042|ref|YP_304057.1| - 1e-40 139.1 0.3 1.7e-40 138.3 0.3 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|73668042|ref|YP_304057.1| - 2.2e-21 76.0 0.0 3.8e-21 75.3 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|73668042|ref|YP_304057.1| - 2.4e-12 46.8 3.0 1.6e-11 44.2 0.0 3.0 3 0 0 3 3 3 1 MoeA C-terminal region (domain IV) DUF2529 PF10740.9 gi|73668042|ref|YP_304057.1| - 0.069 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) ThiS PF02597.20 gi|73668043|ref|YP_304058.1| - 7.5e-19 68.1 0.0 9.1e-19 67.9 0.0 1.1 1 0 0 1 1 1 1 ThiS family PMT_2 PF13231.6 gi|73668044|ref|YP_304059.1| - 1.6e-13 51.2 6.7 1.6e-13 51.2 6.7 3.5 3 1 1 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.18 gi|73668044|ref|YP_304059.1| - 5.8e-12 45.7 6.6 5.8e-12 45.7 6.6 2.5 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase CBS PF00571.28 gi|73668045|ref|YP_304060.1| - 1.3e-25 89.6 4.1 1e-12 48.3 0.5 2.2 2 0 0 2 2 2 2 CBS domain Na_H_Exchanger PF00999.21 gi|73668046|ref|YP_304061.1| - 6.1e-52 176.7 50.5 7.6e-52 176.4 50.5 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family E1-E2_ATPase PF00122.20 gi|73668047|ref|YP_304062.1| - 3.8e-54 182.9 0.2 3.8e-54 182.9 0.2 2.8 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|73668047|ref|YP_304062.1| - 4.7e-47 160.0 9.5 4.7e-47 160.0 9.5 2.7 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|73668047|ref|YP_304062.1| - 3.3e-23 83.1 1.4 4e-22 79.5 1.4 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|73668047|ref|YP_304062.1| - 8.5e-23 80.3 0.1 4.5e-22 77.9 0.0 2.2 2 1 0 2 2 2 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|73668047|ref|YP_304062.1| - 1.1e-18 66.6 0.2 3.8e-18 64.9 0.2 2.0 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|73668047|ref|YP_304062.1| - 1.4e-05 24.9 1.9 0.012 15.4 1.5 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|73668047|ref|YP_304062.1| - 0.00037 20.9 0.0 0.00084 19.8 0.0 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Amino_oxidase PF01593.24 gi|73668048|ref|YP_304063.1| - 3.4e-31 109.0 0.0 4.7e-31 108.6 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DAO PF01266.24 gi|73668048|ref|YP_304063.1| - 5.1e-14 52.6 0.0 2.8e-13 50.2 0.0 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|73668048|ref|YP_304063.1| - 3.7e-10 39.9 0.0 7.9e-10 38.8 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|73668048|ref|YP_304063.1| - 3.6e-08 32.9 0.6 0.00052 19.3 0.1 2.4 2 0 0 2 2 2 2 Thi4 family FAD_binding_2 PF00890.24 gi|73668048|ref|YP_304063.1| - 6.4e-07 28.8 0.2 0.00019 20.7 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|73668048|ref|YP_304063.1| - 0.00067 19.1 0.0 0.0012 18.3 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase GDI PF00996.18 gi|73668048|ref|YP_304063.1| - 0.0055 15.3 0.0 0.0098 14.5 0.0 1.3 1 0 0 1 1 1 1 GDP dissociation inhibitor Pyr_redox_2 PF07992.14 gi|73668048|ref|YP_304063.1| - 0.0069 15.7 0.1 0.014 14.6 0.0 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|73668048|ref|YP_304063.1| - 0.0097 14.6 0.4 0.58 8.8 0.2 2.1 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 gi|73668048|ref|YP_304063.1| - 0.014 14.5 0.2 0.056 12.5 0.0 2.0 2 0 0 2 2 2 0 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|73668048|ref|YP_304063.1| - 0.021 15.3 0.1 2 9.0 0.0 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|73668048|ref|YP_304063.1| - 0.026 13.6 0.0 2.4 7.1 0.0 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein FAD_binding_3 PF01494.19 gi|73668048|ref|YP_304063.1| - 0.072 12.3 0.0 0.14 11.3 0.0 1.5 1 0 0 1 1 1 0 FAD binding domain Pyr_redox_3 PF13738.6 gi|73668048|ref|YP_304063.1| - 0.17 11.1 0.0 0.29 10.3 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF3303 PF11746.8 gi|73668049|ref|YP_304064.1| - 1.1e-06 28.9 0.0 1.3e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) tify PF06200.14 gi|73668049|ref|YP_304064.1| - 0.044 13.1 0.3 0.073 12.4 0.3 1.2 1 0 0 1 1 1 0 tify domain Aldedh PF00171.22 gi|73668050|ref|YP_304065.1| - 1e-165 551.7 0.0 1.2e-165 551.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF2298 PF10060.9 gi|73668051|ref|YP_304066.1| - 2e-116 389.6 34.2 2.7e-116 389.3 34.2 1.1 1 0 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) LPG_synthase_TM PF03706.13 gi|73668052|ref|YP_304067.1| - 6.2e-42 144.2 19.8 7.9e-42 143.8 19.8 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Glycos_transf_2 PF00535.26 gi|73668052|ref|YP_304067.1| - 6.5e-29 100.9 0.1 1e-28 100.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|73668052|ref|YP_304067.1| - 5.4e-07 29.4 0.1 9.2e-07 28.6 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|73668052|ref|YP_304067.1| - 1.6e-06 28.2 0.1 3.1e-06 27.2 0.1 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|73668052|ref|YP_304067.1| - 0.00036 21.0 0.6 0.00079 19.9 0.1 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|73668052|ref|YP_304067.1| - 0.035 13.6 0.0 0.065 12.7 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 21 VF530 PF09905.9 gi|73668052|ref|YP_304067.1| - 0.12 12.6 0.0 0.28 11.4 0.0 1.6 1 0 0 1 1 1 0 DNA-binding protein VF530 TOC159_MAD PF11886.8 gi|73668052|ref|YP_304067.1| - 0.2 10.5 0.0 0.32 9.9 0.0 1.3 1 0 0 1 1 1 0 Translocase of chloroplast 159/132, membrane anchor domain E1-E2_ATPase PF00122.20 gi|73668052|ref|YP_304067.1| - 3.5 7.1 6.3 3.2 7.2 0.8 2.6 2 0 0 2 2 2 0 E1-E2 ATPase HTH_5 PF01022.20 gi|73668053|ref|YP_304068.1| - 5.8e-15 54.9 1.3 1.1e-14 54.0 0.9 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73668053|ref|YP_304068.1| - 7.6e-13 48.3 0.2 1.2e-12 47.6 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain ArsR PF09824.9 gi|73668053|ref|YP_304068.1| - 0.0055 16.3 0.0 0.0071 16.0 0.0 1.3 1 0 0 1 1 1 1 ArsR transcriptional regulator HTH_27 PF13463.6 gi|73668053|ref|YP_304068.1| - 0.013 16.0 0.0 0.022 15.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2513 PF10711.9 gi|73668053|ref|YP_304068.1| - 0.014 15.7 0.0 0.017 15.4 0.0 1.3 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) MarR_2 PF12802.7 gi|73668053|ref|YP_304068.1| - 0.018 14.9 0.1 0.035 14.0 0.1 1.5 1 1 0 1 1 1 0 MarR family HTH_45 PF14947.6 gi|73668053|ref|YP_304068.1| - 0.024 14.6 0.0 0.034 14.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DUF505 PF04458.12 gi|73668053|ref|YP_304068.1| - 0.031 12.7 0.1 0.045 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF505) MutL_C PF08676.11 gi|73668053|ref|YP_304068.1| - 0.032 14.0 0.0 0.044 13.6 0.0 1.2 1 0 0 1 1 1 0 MutL C terminal dimerisation domain HTH_34 PF13601.6 gi|73668053|ref|YP_304068.1| - 0.053 13.7 0.1 0.077 13.2 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_12 PF08461.10 gi|73668053|ref|YP_304068.1| - 0.098 12.6 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain PadR PF03551.14 gi|73668053|ref|YP_304068.1| - 0.13 12.2 0.1 0.26 11.3 0.0 1.6 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family NikR_C PF08753.11 gi|73668054|ref|YP_304069.1| - 1.1e-34 118.5 2.0 1.5e-34 118.0 2.0 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|73668054|ref|YP_304069.1| - 1.8e-09 37.2 1.1 3.8e-09 36.2 0.0 2.0 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|73668054|ref|YP_304069.1| - 0.0059 16.7 0.0 0.034 14.2 0.0 2.1 2 1 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system RHH_8 PF17723.1 gi|73668054|ref|YP_304069.1| - 0.023 14.9 0.0 0.051 13.8 0.0 1.6 1 1 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family OpcA_G6PD_assem PF10128.9 gi|73668054|ref|YP_304069.1| - 0.13 11.7 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase subunit AMP-binding PF00501.28 gi|73668055|ref|YP_304070.1| - 1.2e-18 66.9 0.0 1.6e-18 66.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme SIS_2 PF13580.6 gi|73668055|ref|YP_304070.1| - 0.027 14.5 0.0 0.13 12.3 0.0 2.0 1 1 0 1 1 1 0 SIS domain ABC_tran PF00005.27 gi|73668056|ref|YP_304071.1| - 1.4e-34 119.5 0.0 2.1e-34 119.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668056|ref|YP_304071.1| - 3.7e-14 53.2 0.1 4.7e-06 26.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668056|ref|YP_304071.1| - 8.6e-07 28.6 0.2 0.00066 19.2 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|73668056|ref|YP_304071.1| - 1.9e-06 28.5 0.1 2.6e-06 28.1 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73668056|ref|YP_304071.1| - 4.2e-06 26.4 0.0 7.9e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|73668056|ref|YP_304071.1| - 7.3e-05 22.6 0.1 0.018 14.8 0.1 2.1 1 1 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73668056|ref|YP_304071.1| - 0.00012 22.0 0.0 0.00021 21.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|73668056|ref|YP_304071.1| - 0.00044 20.7 0.1 0.00073 20.0 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 gi|73668056|ref|YP_304071.1| - 0.00099 18.0 0.1 0.48 9.2 0.1 2.1 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_27 PF13514.6 gi|73668056|ref|YP_304071.1| - 0.0071 16.0 0.0 0.011 15.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|73668056|ref|YP_304071.1| - 0.016 14.9 0.1 0.035 13.8 0.1 1.5 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|73668056|ref|YP_304071.1| - 0.026 13.9 0.0 0.045 13.1 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA PF00004.29 gi|73668056|ref|YP_304071.1| - 0.034 14.6 0.0 0.099 13.1 0.0 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|73668056|ref|YP_304071.1| - 0.054 13.4 0.1 0.37 10.7 0.1 2.0 2 0 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 gi|73668056|ref|YP_304071.1| - 0.059 13.7 0.4 0.14 12.4 0.1 1.7 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|73668056|ref|YP_304071.1| - 0.062 13.2 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_19 PF13245.6 gi|73668056|ref|YP_304071.1| - 0.1 12.9 0.2 1.2 9.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|73668056|ref|YP_304071.1| - 0.17 11.6 0.3 0.32 10.7 0.1 1.6 2 0 0 2 2 2 0 AAA domain FecCD PF01032.18 gi|73668057|ref|YP_304072.1| - 9e-90 300.8 33.1 1.1e-89 300.6 33.1 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|73668057|ref|YP_304072.1| - 8.4e-05 22.2 18.1 8.4e-05 22.2 18.1 1.8 1 1 0 1 1 1 1 ABC 3 transport family Radical_SAM PF04055.21 gi|73668058|ref|YP_304073.1| - 1.7e-06 28.5 0.0 5.9e-06 26.8 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73668058|ref|YP_304073.1| - 9.7e-06 25.9 0.3 2.7e-05 24.5 0.3 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain Peripla_BP_2 PF01497.18 gi|73668058|ref|YP_304073.1| - 0.00013 21.7 0.0 0.00022 20.9 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein zf-C4_Topoisom PF01396.19 gi|73668058|ref|YP_304073.1| - 0.0051 16.6 0.3 1.6 8.5 0.0 2.7 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger Methyltransf_11 PF08241.12 gi|73668059|ref|YP_304074.1| - 8e-20 71.3 0.0 8.8e-19 68.0 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668059|ref|YP_304074.1| - 1e-17 64.6 0.0 1.2e-16 61.2 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668059|ref|YP_304074.1| - 4.3e-13 49.3 0.0 5.2e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668059|ref|YP_304074.1| - 9.1e-10 39.2 0.0 1.7e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668059|ref|YP_304074.1| - 4e-09 36.2 0.0 5.8e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|73668059|ref|YP_304074.1| - 4e-07 30.0 0.0 6.7e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|73668059|ref|YP_304074.1| - 0.00034 20.1 0.1 0.00074 19.0 0.0 1.7 1 1 1 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|73668059|ref|YP_304074.1| - 0.00042 19.9 0.1 0.00087 18.9 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.15 gi|73668059|ref|YP_304074.1| - 0.00058 19.8 0.1 0.008 16.0 0.1 2.0 1 1 0 1 1 1 1 Hypothetical methyltransferase UPF0020 PF01170.18 gi|73668059|ref|YP_304074.1| - 0.0022 17.7 0.0 0.0091 15.7 0.0 1.9 1 1 1 2 2 2 1 Putative RNA methylase family UPF0020 Methyltransf_29 PF03141.16 gi|73668059|ref|YP_304074.1| - 0.0042 15.7 0.0 0.0051 15.4 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_32 PF13679.6 gi|73668059|ref|YP_304074.1| - 0.034 14.1 0.0 0.062 13.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|73668059|ref|YP_304074.1| - 0.083 12.6 0.0 6.2 6.5 0.0 2.1 2 0 0 2 2 2 0 DNA methylase CMAS PF02353.20 gi|73668059|ref|YP_304074.1| - 0.091 12.0 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_16 PF10294.9 gi|73668059|ref|YP_304074.1| - 0.15 11.8 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Peripla_BP_2 PF01497.18 gi|73668060|ref|YP_304075.1| - 2.5e-25 89.5 0.0 3.1e-25 89.1 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein RapH_N PF18801.1 gi|73668060|ref|YP_304075.1| - 0.087 12.9 0.0 0.19 11.8 0.0 1.6 1 0 0 1 1 1 0 response regulator aspartate phosphatase H, N terminal DUF4405 PF14358.6 gi|73668061|ref|YP_304076.1| - 9.5e-06 26.1 5.1 1.2e-05 25.8 5.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4405) Ferric_reduct PF01794.19 gi|73668061|ref|YP_304076.1| - 0.003 17.7 0.5 0.0031 17.6 0.5 1.2 1 0 0 1 1 1 1 Ferric reductase like transmembrane component MLANA PF14991.6 gi|73668061|ref|YP_304076.1| - 0.22 11.8 0.3 0.24 11.7 0.3 1.1 1 0 0 1 1 1 0 Protein melan-A SCIMP PF15050.6 gi|73668061|ref|YP_304076.1| - 0.31 11.5 1.3 0.39 11.2 1.3 1.1 1 0 0 1 1 1 0 SCIMP protein DUF169 PF02596.15 gi|73668062|ref|YP_304077.1| - 4.9e-62 209.5 0.1 5.5e-62 209.4 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 LIM PF00412.22 gi|73668063|ref|YP_304078.1| - 0.0089 16.2 5.6 0.016 15.4 5.6 1.4 1 0 0 1 1 1 1 LIM domain TrmB PF01978.19 gi|73668063|ref|YP_304078.1| - 0.045 13.6 0.0 0.067 13.1 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Metallothio_Pro PF02069.16 gi|73668063|ref|YP_304078.1| - 0.063 13.5 7.1 0.1 12.9 7.1 1.3 1 0 0 1 1 1 0 Prokaryotic metallothionein zf-RING_2 PF13639.6 gi|73668063|ref|YP_304078.1| - 0.73 10.2 11.5 1.3 9.5 11.5 1.4 1 0 0 1 1 1 0 Ring finger domain CMD PF02627.20 gi|73668064|ref|YP_304079.1| - 6.2e-18 64.6 0.2 7.2e-18 64.4 0.2 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family TrmB PF01978.19 gi|73668065|ref|YP_304080.1| - 7.8e-06 25.7 0.0 0.0085 16.0 0.0 2.3 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|73668065|ref|YP_304080.1| - 0.00078 19.2 0.0 0.0089 15.8 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|73668065|ref|YP_304080.1| - 0.00087 19.3 0.0 0.018 15.1 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain LIM PF00412.22 gi|73668065|ref|YP_304080.1| - 0.0019 18.4 0.5 0.004 17.4 0.5 1.5 1 0 0 1 1 1 1 LIM domain NMD3 PF04981.13 gi|73668065|ref|YP_304080.1| - 0.0035 16.8 0.0 0.0051 16.3 0.0 1.5 1 0 0 1 1 1 1 NMD3 family HTH_23 PF13384.6 gi|73668065|ref|YP_304080.1| - 0.0036 17.1 0.5 2.9 7.8 0.0 3.6 3 1 1 4 4 4 1 Homeodomain-like domain DUF4428 PF14471.6 gi|73668065|ref|YP_304080.1| - 0.008 16.1 0.8 0.024 14.5 0.8 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) HTH_Crp_2 PF13545.6 gi|73668065|ref|YP_304080.1| - 0.012 15.5 0.0 3.6 7.6 0.0 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Penicillinase_R PF03965.16 gi|73668065|ref|YP_304080.1| - 0.015 15.7 0.0 0.028 14.8 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor Cdc6_C PF09079.11 gi|73668065|ref|YP_304080.1| - 0.022 14.7 0.0 0.049 13.6 0.0 1.6 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain TFIIE_alpha PF02002.17 gi|73668065|ref|YP_304080.1| - 0.037 13.9 0.0 0.099 12.5 0.0 1.7 2 0 0 2 2 2 0 TFIIE alpha subunit DUF4423 PF14394.6 gi|73668065|ref|YP_304080.1| - 0.038 13.7 0.0 1.3 8.7 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) MarR_2 PF12802.7 gi|73668065|ref|YP_304080.1| - 0.045 13.7 0.0 3.6 7.5 0.0 2.2 2 0 0 2 2 2 0 MarR family Sgf11 PF08209.11 gi|73668065|ref|YP_304080.1| - 0.1 12.2 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) Mnd1 PF03962.15 gi|73668065|ref|YP_304080.1| - 0.11 12.8 0.1 0.99 9.7 0.0 2.3 2 1 0 2 2 2 0 Mnd1 HTH domain PRP21_like_P PF12230.8 gi|73668065|ref|YP_304080.1| - 0.12 12.2 0.1 1.4 8.7 0.1 2.0 1 1 0 1 1 1 0 Pre-mRNA splicing factor PRP21 like protein PadR PF03551.14 gi|73668065|ref|YP_304080.1| - 0.13 12.2 0.0 0.29 11.1 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family PadR PF03551.14 gi|73668066|ref|YP_304081.1| - 4.3e-14 52.2 0.0 6e-14 51.8 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|73668066|ref|YP_304081.1| - 0.0079 16.8 0.1 0.012 16.3 0.1 1.2 1 0 0 1 1 1 1 Replication terminator protein DUF4364 PF14277.6 gi|73668066|ref|YP_304081.1| - 0.013 15.3 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) ArsP_1 PF03773.13 gi|73668067|ref|YP_304082.1| - 0.6 9.2 11.1 0.68 9.0 11.1 1.0 1 0 0 1 1 1 0 Predicted permease ArsP_1 PF03773.13 gi|73668068|ref|YP_304083.1| - 1.3e-11 44.2 3.4 1.3e-11 44.2 3.4 1.3 2 0 0 2 2 2 1 Predicted permease YoqO PF14037.6 gi|73668068|ref|YP_304083.1| - 0.26 11.8 5.8 5.9 7.5 0.7 2.6 2 1 0 2 2 2 0 YoqO-like protein Pyr_excise PF03013.14 gi|73668069|ref|YP_304084.1| - 2.7e-13 50.0 1.2 4.9e-13 49.2 1.2 1.5 1 1 0 1 1 1 1 Pyrimidine dimer DNA glycosylase PPC PF04151.15 gi|73668070|ref|YP_304085.1| - 0.0023 19.0 0.1 0.0057 17.7 0.1 1.7 1 1 0 1 1 1 1 Bacterial pre-peptidase C-terminal domain DUF378 PF04070.12 gi|73668071|ref|YP_304086.1| - 4.2e-25 87.4 9.4 4.6e-25 87.3 9.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF378) DNA_photolyase PF00875.18 gi|73668073|ref|YP_304088.1| - 9.1e-33 113.6 0.0 1.8e-32 112.6 0.0 1.4 1 0 0 1 1 1 1 DNA photolyase Lactamase_B_2 PF12706.7 gi|73668074|ref|YP_304089.1| - 2.8e-27 95.5 0.0 3.7e-27 95.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|73668074|ref|YP_304089.1| - 1.2e-19 71.1 0.0 1.8e-19 70.5 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|73668074|ref|YP_304089.1| - 5.9e-06 26.3 0.2 1.2e-05 25.3 0.2 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Hpr_kinase_C PF07475.12 gi|73668074|ref|YP_304089.1| - 0.15 11.6 0.0 0.22 11.0 0.0 1.2 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain AAA PF00004.29 gi|73668075|ref|YP_304090.1| - 2.9e-37 128.0 0.1 8.7e-37 126.5 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|73668075|ref|YP_304090.1| - 3.2e-10 39.6 0.0 1.1e-09 37.9 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 gi|73668075|ref|YP_304090.1| - 2.8e-06 27.4 0.0 1.2e-05 25.3 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|73668075|ref|YP_304090.1| - 6.3e-06 26.8 0.0 2e-05 25.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73668075|ref|YP_304090.1| - 2.3e-05 24.9 0.2 0.00044 20.7 0.2 2.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_2 PF07724.14 gi|73668075|ref|YP_304090.1| - 0.00026 21.2 0.3 0.00094 19.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|73668075|ref|YP_304090.1| - 0.00031 21.0 0.7 0.02 15.2 0.0 3.0 2 1 1 3 3 3 1 AAA domain AAA_28 PF13521.6 gi|73668075|ref|YP_304090.1| - 0.00062 20.0 0.0 0.0018 18.6 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|73668075|ref|YP_304090.1| - 0.00075 19.7 0.0 0.0016 18.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_7 PF12775.7 gi|73668075|ref|YP_304090.1| - 0.0013 18.3 0.0 0.0029 17.1 0.0 1.6 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF815 PF05673.13 gi|73668075|ref|YP_304090.1| - 0.0013 17.9 0.1 0.0031 16.7 0.1 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF815) RuvB_N PF05496.12 gi|73668075|ref|YP_304090.1| - 0.0014 18.4 0.0 0.0024 17.6 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 gi|73668075|ref|YP_304090.1| - 0.0021 17.3 0.1 0.007 15.6 0.0 1.8 1 1 0 1 1 1 1 TIP49 P-loop domain Mg_chelatase PF01078.21 gi|73668075|ref|YP_304090.1| - 0.0046 16.4 0.0 0.014 14.8 0.0 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_17 PF13207.6 gi|73668075|ref|YP_304090.1| - 0.0049 17.3 0.5 0.11 13.0 0.0 2.5 2 0 0 2 2 2 1 AAA domain SKI PF01202.22 gi|73668075|ref|YP_304090.1| - 0.011 15.9 0.0 0.03 14.4 0.0 1.8 1 0 0 1 1 1 0 Shikimate kinase Cytidylate_kin PF02224.18 gi|73668075|ref|YP_304090.1| - 0.017 14.9 0.1 0.048 13.4 0.0 1.8 2 0 0 2 2 2 0 Cytidylate kinase IstB_IS21 PF01695.17 gi|73668075|ref|YP_304090.1| - 0.019 14.7 0.0 0.053 13.3 0.0 1.7 1 1 1 2 2 2 0 IstB-like ATP binding protein AAA_11 PF13086.6 gi|73668075|ref|YP_304090.1| - 0.019 14.7 0.4 0.048 13.4 0.0 1.8 1 1 1 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|73668075|ref|YP_304090.1| - 0.027 14.0 0.3 1.2 8.6 0.0 2.5 1 1 1 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|73668075|ref|YP_304090.1| - 0.062 13.3 0.1 0.23 11.5 0.0 2.0 2 1 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 gi|73668075|ref|YP_304090.1| - 0.086 12.5 0.0 0.21 11.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain ResIII PF04851.15 gi|73668075|ref|YP_304090.1| - 0.11 12.5 0.0 0.25 11.3 0.0 1.7 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit MMR_HSR1 PF01926.23 gi|73668075|ref|YP_304090.1| - 0.12 12.5 0.0 0.33 11.0 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase RNA_helicase PF00910.22 gi|73668075|ref|YP_304090.1| - 0.14 12.5 0.0 0.33 11.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase SAICAR_synt PF01259.18 gi|73668076|ref|YP_304091.1| - 0.02 14.5 0.0 0.02 14.5 0.0 1.1 1 0 0 1 1 1 0 SAICAR synthetase DUF1871 PF08958.10 gi|73668076|ref|YP_304091.1| - 0.17 12.2 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1871) SAICAR_synt PF01259.18 gi|73668077|ref|YP_304092.1| - 2.3e-62 210.9 0.7 2.7e-62 210.6 0.7 1.0 1 0 0 1 1 1 1 SAICAR synthetase Nre_N PF04894.12 gi|73668078|ref|YP_304093.1| - 4.7e-106 354.6 0.0 5.7e-106 354.3 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|73668078|ref|YP_304093.1| - 2.2e-40 137.0 0.0 3.7e-40 136.3 0.0 1.4 1 0 0 1 1 1 1 Archaeal Nre, C-terminal Sigma70_r4 PF04545.16 gi|73668079|ref|YP_304094.1| - 0.00086 18.8 0.0 0.002 17.6 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|73668079|ref|YP_304094.1| - 0.0017 18.3 0.0 0.0031 17.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix Sigma70_r4_2 PF08281.12 gi|73668079|ref|YP_304094.1| - 0.0032 17.1 0.0 0.0054 16.4 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|73668079|ref|YP_304094.1| - 0.0046 16.5 0.0 0.0095 15.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_40 PF14493.6 gi|73668079|ref|YP_304094.1| - 0.011 16.2 0.0 0.014 15.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|73668079|ref|YP_304094.1| - 0.036 14.0 0.0 0.068 13.1 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|73668079|ref|YP_304094.1| - 0.067 13.2 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_26 PF13443.6 gi|73668079|ref|YP_304094.1| - 0.12 12.8 0.0 0.2 12.1 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain SUI1 PF01253.22 gi|73668080|ref|YP_304095.1| - 1e-20 74.1 0.1 1.2e-20 73.7 0.1 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.15 gi|73668080|ref|YP_304095.1| - 0.013 15.2 0.5 0.018 14.8 0.5 1.3 1 0 0 1 1 1 0 DTW domain Img2 PF05046.14 gi|73668080|ref|YP_304095.1| - 0.036 14.3 0.2 0.09 13.1 0.2 1.7 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) HTH_45 PF14947.6 gi|73668081|ref|YP_304096.1| - 6.4e-06 26.1 0.6 8e-06 25.8 0.6 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix MarR PF01047.22 gi|73668081|ref|YP_304096.1| - 4.6e-05 23.3 0.3 6.6e-05 22.8 0.3 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|73668081|ref|YP_304096.1| - 9.5e-05 22.2 0.5 0.00013 21.8 0.5 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 gi|73668081|ref|YP_304096.1| - 0.00074 19.7 0.6 0.0023 18.1 0.3 1.8 1 1 1 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_34 PF13601.6 gi|73668081|ref|YP_304096.1| - 0.0018 18.4 0.1 0.0038 17.4 0.1 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_DeoR PF08220.12 gi|73668081|ref|YP_304096.1| - 0.003 17.3 0.1 0.0044 16.7 0.1 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_24 PF13412.6 gi|73668081|ref|YP_304096.1| - 0.0032 17.0 0.2 0.0044 16.5 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HxlR PF01638.17 gi|73668081|ref|YP_304096.1| - 0.0047 16.7 0.6 0.014 15.2 0.7 1.9 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_27 PF13463.6 gi|73668081|ref|YP_304096.1| - 0.0054 17.2 0.1 0.007 16.8 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|73668081|ref|YP_304096.1| - 0.0061 16.3 0.3 0.0083 15.9 0.3 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_20 PF12840.7 gi|73668081|ref|YP_304096.1| - 0.0084 16.2 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TFIIE_alpha PF02002.17 gi|73668081|ref|YP_304096.1| - 0.01 15.7 0.3 0.011 15.6 0.3 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit TBPIP PF07106.13 gi|73668081|ref|YP_304096.1| - 0.016 15.1 1.2 0.072 13.0 0.6 2.0 1 1 1 2 2 2 0 TBPIP/Hop2 winged helix domain DUF2089 PF09862.9 gi|73668081|ref|YP_304096.1| - 0.048 13.7 0.3 0.053 13.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) MarR_2 PF12802.7 gi|73668081|ref|YP_304096.1| - 0.056 13.3 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 MarR family AIRS_C PF02769.22 gi|73668082|ref|YP_304097.1| - 1.3e-48 165.1 6.8 1.4e-31 109.7 0.8 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|73668082|ref|YP_304097.1| - 1.3e-46 157.2 1.6 2e-24 86.1 0.1 3.8 4 0 0 4 4 4 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|73668082|ref|YP_304097.1| - 6.6e-08 33.0 0.1 2.1e-07 31.3 0.0 2.0 2 0 0 2 2 2 1 Formylglycinamide ribonucleotide amidotransferase linker domain Glyco_hydro_57 PF03065.15 gi|73668083|ref|YP_304098.1| - 6.6e-47 160.3 0.1 1.1e-46 159.6 0.1 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Glyco_hydro_57 PF03065.15 gi|73668084|ref|YP_304099.1| - 2e-66 224.5 0.0 2.8e-66 224.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.21 gi|73668084|ref|YP_304099.1| - 1.8e-05 24.6 0.0 3.1e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase V4R PF02830.18 gi|73668085|ref|YP_304100.1| - 4.5e-20 71.4 0.2 1.4e-19 69.8 0.1 1.9 2 0 0 2 2 2 1 V4R domain Glyco_hydro_15 PF00723.21 gi|73668086|ref|YP_304101.1| - 1.6e-13 50.3 0.3 4.1e-10 39.0 0.3 2.7 2 1 1 3 3 3 2 Glycosyl hydrolases family 15 Glucodextran_N PF09137.11 gi|73668086|ref|YP_304101.1| - 0.034 13.7 0.0 0.05 13.2 0.0 1.2 1 0 0 1 1 1 0 Glucodextranase, domain N tRNA-synt_2b PF00587.25 gi|488599556|ref|YP_304102.3| - 1e-32 113.6 0.0 2.8e-32 112.1 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|488599556|ref|YP_304102.3| - 3.3e-27 94.8 2.6 6.7e-27 93.9 2.6 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain MIP-T3_C PF17749.1 gi|488599556|ref|YP_304102.3| - 0.0057 16.6 1.5 0.01 15.8 1.5 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region DUF948 PF06103.11 gi|488599556|ref|YP_304102.3| - 0.015 15.5 0.4 0.046 14.0 0.2 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) KLRAQ PF10205.9 gi|488599556|ref|YP_304102.3| - 0.027 14.7 0.3 0.05 13.9 0.3 1.3 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein Tex_N PF09371.10 gi|488599556|ref|YP_304102.3| - 0.84 9.3 3.7 0.5 10.0 1.1 1.8 2 0 0 2 2 2 0 Tex-like protein N-terminal domain Peptidase_S49 PF01343.18 gi|73668088|ref|YP_304103.1| - 3.9e-41 140.6 0.3 6.3e-41 139.9 0.3 1.3 1 0 0 1 1 1 1 Peptidase family S49 Asparaginase_C PF17763.1 gi|73668088|ref|YP_304103.1| - 8.9e-05 22.7 0.2 0.00023 21.4 0.2 1.6 1 0 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain CLP_protease PF00574.23 gi|73668088|ref|YP_304103.1| - 0.0071 16.3 1.3 0.016 15.1 0.6 1.8 2 0 0 2 2 2 1 Clp protease Asparaginase PF00710.20 gi|73668088|ref|YP_304103.1| - 0.036 13.6 0.2 0.18 11.3 0.1 2.1 2 1 1 3 3 3 0 Asparaginase, N-terminal Ligase_CoA PF00549.19 gi|73668088|ref|YP_304103.1| - 0.052 13.4 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 CoA-ligase tRNA-synt_1g PF09334.11 gi|73668089|ref|YP_304104.1| - 2e-155 517.4 0.0 2.5e-155 517.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|73668089|ref|YP_304104.1| - 1.3e-27 95.7 0.3 2.5e-27 94.8 0.3 1.5 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 gi|73668089|ref|YP_304104.1| - 7.2e-21 74.1 0.1 1e-10 40.5 0.0 4.0 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|73668089|ref|YP_304104.1| - 3.6e-19 69.2 0.1 6.3e-19 68.4 0.1 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|73668089|ref|YP_304104.1| - 1e-18 67.8 0.0 1.8e-11 44.0 0.0 2.7 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|73668089|ref|YP_304104.1| - 6e-05 22.1 0.0 0.15 11.0 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) zf_C2H2_10 PF18414.1 gi|73668089|ref|YP_304104.1| - 0.016 14.7 2.9 0.51 9.9 0.5 2.4 2 0 0 2 2 2 0 C2H2 type zinc-finger zf-RING_7 PF02591.15 gi|73668089|ref|YP_304104.1| - 0.28 11.4 3.3 1.3 9.2 0.0 3.1 2 0 0 2 2 2 0 C4-type zinc ribbon domain DZR PF12773.7 gi|73668089|ref|YP_304104.1| - 0.97 9.5 7.0 5.7 7.0 7.0 2.2 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|73668089|ref|YP_304104.1| - 4.7 7.1 11.8 0.83 9.5 3.4 2.7 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|73668089|ref|YP_304104.1| - 7.8 6.1 14.8 3.1 7.3 1.1 3.8 3 1 1 4 4 4 0 zinc-ribbon domain FtsH_ext PF06480.15 gi|73668090|ref|YP_304105.1| - 0.77 10.1 7.3 14 6.1 7.3 2.1 1 1 0 1 1 1 0 FtsH Extracellular PTPRCAP PF15713.5 gi|73668090|ref|YP_304105.1| - 1.8 8.8 10.7 2.5 8.4 10.7 1.1 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Zip PF02535.22 gi|73668090|ref|YP_304105.1| - 2.4 7.3 4.1 3.6 6.7 4.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter NB-ARC PF00931.22 gi|73668091|ref|YP_304106.1| - 3.3e-30 105.1 0.0 7e-30 104.0 0.0 1.5 1 0 0 1 1 1 1 NB-ARC domain TIR_2 PF13676.6 gi|73668091|ref|YP_304106.1| - 3e-23 82.7 0.1 2.5e-22 79.7 0.0 2.5 2 0 0 2 2 2 1 TIR domain WD40 PF00400.32 gi|73668091|ref|YP_304106.1| - 5.7e-21 74.4 3.8 1.9e-05 25.3 0.1 3.6 3 0 0 3 3 3 3 WD domain, G-beta repeat APAF1_C PF17908.1 gi|73668091|ref|YP_304106.1| - 7.2e-13 48.7 0.1 2.1e-12 47.2 0.1 1.9 1 0 0 1 1 1 1 APAF-1 helical domain TIR PF01582.20 gi|73668091|ref|YP_304106.1| - 2.2e-05 24.3 0.0 0.00044 20.1 0.0 2.4 2 0 0 2 2 2 1 TIR domain DUF1863 PF08937.11 gi|73668091|ref|YP_304106.1| - 0.00053 20.3 0.1 0.003 17.9 0.0 2.3 2 1 0 2 2 2 1 MTH538 TIR-like domain (DUF1863) AAA_16 PF13191.6 gi|73668091|ref|YP_304106.1| - 0.0034 17.8 0.0 0.015 15.7 0.0 2.2 1 0 0 1 1 1 1 AAA ATPase domain Nucleoporin_N PF08801.11 gi|73668091|ref|YP_304106.1| - 0.054 12.2 0.2 0.34 9.6 0.0 1.9 1 1 1 2 2 2 0 Nup133 N terminal like NACHT PF05729.12 gi|73668091|ref|YP_304106.1| - 0.063 13.2 0.0 0.24 11.3 0.0 2.1 2 1 0 2 2 2 0 NACHT domain DUF4062 PF13271.6 gi|73668091|ref|YP_304106.1| - 0.074 13.4 0.0 0.31 11.4 0.0 2.1 2 0 0 2 2 1 0 Domain of unknown function (DUF4062) DUF272 PF03312.15 gi|73668091|ref|YP_304106.1| - 0.11 12.7 0.1 0.26 11.5 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF272) AAA_22 PF13401.6 gi|73668091|ref|YP_304106.1| - 0.16 12.3 0.8 1.8 8.8 0.0 2.8 3 0 0 3 3 3 0 AAA domain WD40 PF00400.32 gi|73668092|ref|YP_304107.1| - 6.6e-83 270.5 27.8 1.1e-07 32.4 0.0 11.3 11 0 0 11 11 11 11 WD domain, G-beta repeat WD40_like PF17005.5 gi|73668092|ref|YP_304107.1| - 2.9e-22 79.4 5.5 7.4e-07 28.8 1.5 4.4 2 1 3 5 5 5 5 WD40-like domain ANAPC4_WD40 PF12894.7 gi|73668092|ref|YP_304107.1| - 3.2e-21 75.4 10.2 0.046 14.0 0.1 9.0 1 1 9 10 10 10 7 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 gi|73668092|ref|YP_304107.1| - 2.3e-19 69.5 15.2 6.4e-05 21.8 0.7 10.1 2 2 8 10 10 10 5 Nucleoporin Nup120/160 eIF2A PF08662.11 gi|73668092|ref|YP_304107.1| - 6.8e-12 45.7 1.2 0.038 13.9 0.1 5.6 1 1 6 7 7 7 5 Eukaryotic translation initiation factor eIF2A Nucleoporin_N PF08801.11 gi|73668092|ref|YP_304107.1| - 1.9e-10 40.1 17.8 0.057 12.1 1.3 7.5 1 1 5 7 7 7 5 Nup133 N terminal like Cytochrom_D1 PF02239.16 gi|73668092|ref|YP_304107.1| - 1.2e-08 33.9 9.3 0.017 13.6 0.2 5.3 2 2 3 5 5 5 4 Cytochrome D1 heme domain PD40 PF07676.12 gi|73668092|ref|YP_304107.1| - 1.4e-07 31.3 5.8 9.3 6.3 0.0 8.0 9 0 0 9 9 9 0 WD40-like Beta Propeller Repeat VID27 PF08553.10 gi|73668092|ref|YP_304107.1| - 7e-07 28.6 5.0 0.33 10.0 0.1 4.5 2 1 4 6 6 6 4 VID27 C-terminal WD40-like domain Ge1_WD40 PF16529.5 gi|73668092|ref|YP_304107.1| - 2.1e-06 26.9 2.2 1.9 7.4 0.0 6.1 2 1 3 6 6 6 1 WD40 region of Ge1, enhancer of mRNA-decapping protein DUF5046 PF16465.5 gi|73668092|ref|YP_304107.1| - 0.00023 20.7 0.3 0.4 10.1 0.0 3.6 1 1 4 5 5 5 3 Domain of unknown function (DUF5046) GspH PF12019.8 gi|73668092|ref|YP_304107.1| - 0.0038 17.6 0.1 39 4.7 0.0 5.0 1 1 3 5 5 5 0 Type II transport protein GspH Nbas_N PF15492.6 gi|73668092|ref|YP_304107.1| - 0.0063 15.9 0.1 2.7 7.3 0.0 3.9 1 1 1 3 3 3 1 Neuroblastoma-amplified sequence, N terminal DUF4597 PF15366.6 gi|73668092|ref|YP_304107.1| - 0.0065 16.2 8.0 38 4.1 0.0 7.2 5 2 4 9 9 8 0 Domain of unknown function (DUF4597) RalF_SCD PF18248.1 gi|73668092|ref|YP_304107.1| - 0.018 15.0 0.1 0.049 13.6 0.1 1.8 1 0 0 1 1 1 0 RalF C-terminal Sec-7 capping domain Pox_TAP PF03355.14 gi|73668092|ref|YP_304107.1| - 0.035 13.7 0.5 0.23 11.0 0.1 2.4 3 0 0 3 3 3 0 Viral Trans-Activator Protein DUF2141 PF09912.9 gi|73668092|ref|YP_304107.1| - 0.05 13.5 0.0 31 4.5 0.0 3.9 4 0 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2141) HIRA_B PF09453.10 gi|73668092|ref|YP_304107.1| - 0.065 13.1 16.9 31 4.6 0.0 8.7 10 0 0 10 10 10 0 HIRA B motif FeThRed_A PF02941.15 gi|73668092|ref|YP_304107.1| - 0.071 13.3 0.1 13 6.0 0.0 3.6 3 1 1 4 4 4 0 Ferredoxin thioredoxin reductase variable alpha chain Dfp1_Him1_M PF08630.10 gi|73668092|ref|YP_304107.1| - 0.072 13.3 7.2 13 6.0 0.1 5.8 6 2 2 8 8 8 0 Dfp1/Him1, central region SUKH_6 PF14568.6 gi|73668092|ref|YP_304107.1| - 0.11 12.9 0.2 7.7 7.0 0.0 3.6 1 1 1 3 3 3 0 SMI1-KNR4 cell-wall HARP PF07443.13 gi|73668092|ref|YP_304107.1| - 0.11 12.1 0.8 75 3.1 0.0 4.7 7 0 0 7 7 7 0 HepA-related protein (HARP) PQQ PF01011.21 gi|73668092|ref|YP_304107.1| - 0.12 12.4 0.0 28 4.9 0.0 4.1 4 0 0 4 4 4 0 PQQ enzyme repeat Big_5 PF13205.6 gi|73668092|ref|YP_304107.1| - 0.12 13.1 2.8 9.5 7.0 0.3 3.5 2 1 1 3 3 3 0 Bacterial Ig-like domain nos_propeller PF18764.1 gi|73668092|ref|YP_304107.1| - 0.22 11.4 3.4 42 4.1 0.0 5.0 7 0 0 7 7 6 0 Nitrous oxide reductase propeller repeat Fibrinogen_aC PF12160.8 gi|73668092|ref|YP_304107.1| - 0.33 10.8 9.3 15 5.6 0.1 5.2 6 0 0 6 6 4 0 Fibrinogen alpha C domain CBM_19 PF03427.13 gi|73668092|ref|YP_304107.1| - 0.35 10.9 7.1 37 4.4 0.1 5.6 7 0 0 7 7 7 0 Carbohydrate binding domain (family 19) Rav1p_C PF12234.8 gi|73668092|ref|YP_304107.1| - 0.88 7.9 6.9 32 2.8 0.0 4.5 2 1 3 6 6 6 0 RAVE protein 1 C terminal DUF5122 PF17164.4 gi|73668092|ref|YP_304107.1| - 1.5 9.2 14.9 39 4.6 0.0 7.5 10 0 0 10 10 10 0 Domain of unknown function (DUF5122) beta-propeller Pribosyltran PF00156.27 gi|73668093|ref|YP_304108.1| - 5.3e-19 68.3 1.0 8.7e-19 67.6 1.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain HTH_7 PF02796.15 gi|73668093|ref|YP_304108.1| - 6.9e-05 22.8 0.0 0.00021 21.3 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase PRTase_2 PF15609.6 gi|73668093|ref|YP_304108.1| - 7.1e-05 22.4 0.3 0.00023 20.7 0.1 1.7 1 1 1 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.6 gi|73668093|ref|YP_304108.1| - 0.00015 21.3 0.1 0.00029 20.3 0.1 1.5 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase HTH_11 PF08279.12 gi|73668093|ref|YP_304108.1| - 0.0026 17.7 0.2 0.039 13.9 0.0 2.7 3 0 0 3 3 3 1 HTH domain GerE PF00196.19 gi|73668093|ref|YP_304108.1| - 0.0029 17.1 0.0 0.0071 15.9 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_Crp_2 PF13545.6 gi|73668093|ref|YP_304108.1| - 0.019 14.9 0.0 0.048 13.6 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PAX PF00292.18 gi|73668093|ref|YP_304108.1| - 0.02 14.8 0.2 1.9 8.4 0.0 2.3 2 1 0 2 2 2 0 'Paired box' domain HTH_23 PF13384.6 gi|73668093|ref|YP_304108.1| - 0.02 14.7 0.0 0.053 13.3 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_38 PF13936.6 gi|73668093|ref|YP_304108.1| - 0.026 14.3 0.2 0.73 9.6 0.0 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|73668093|ref|YP_304108.1| - 0.031 13.8 0.2 0.23 11.1 0.0 2.3 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 gi|73668093|ref|YP_304108.1| - 0.036 13.6 0.0 0.17 11.4 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 OmpA_membrane PF01389.17 gi|73668093|ref|YP_304108.1| - 0.038 13.7 0.0 0.047 13.4 0.0 1.2 1 0 0 1 1 1 0 OmpA-like transmembrane domain HTH_40 PF14493.6 gi|73668093|ref|YP_304108.1| - 0.042 14.3 0.0 0.12 12.8 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|73668093|ref|YP_304108.1| - 0.077 12.9 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 MarR family Sigma70_r4_2 PF08281.12 gi|73668093|ref|YP_304108.1| - 0.11 12.2 0.0 0.42 10.3 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 Terminase_5 PF06056.12 gi|73668093|ref|YP_304108.1| - 0.12 12.2 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) PRTase_3 PF15610.6 gi|73668093|ref|YP_304108.1| - 0.21 10.8 0.0 0.32 10.2 0.0 1.2 1 0 0 1 1 1 0 PRTase ComF-like CYTH PF01928.21 gi|73668094|ref|YP_304109.1| - 2.3e-41 141.7 2.4 2.6e-41 141.5 2.4 1.0 1 0 0 1 1 1 1 CYTH domain Zincin_1 PF06262.11 gi|73668094|ref|YP_304109.1| - 0.007 16.5 0.0 0.017 15.2 0.0 1.7 2 0 0 2 2 2 1 Zincin-like metallopeptidase OB_aCoA_assoc PF01796.17 gi|73668095|ref|YP_304110.1| - 2.6e-20 72.2 0.0 3.8e-20 71.7 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|73668095|ref|YP_304110.1| - 4.2e-10 39.3 2.3 6.1e-10 38.8 2.3 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DZR PF12773.7 gi|73668095|ref|YP_304110.1| - 0.011 15.8 0.6 0.016 15.2 0.6 1.2 1 0 0 1 1 1 0 Double zinc ribbon C1_1 PF00130.22 gi|73668095|ref|YP_304110.1| - 0.039 13.8 0.4 0.065 13.1 0.4 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-CCHC_4 PF14392.6 gi|73668095|ref|YP_304110.1| - 0.11 12.3 0.3 0.11 12.3 0.3 2.0 2 0 0 2 2 2 0 Zinc knuckle Thiolase_N PF00108.23 gi|73668096|ref|YP_304111.1| - 1.1e-25 90.5 1.2 3e-25 89.1 1.2 1.7 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|73668096|ref|YP_304111.1| - 5.5e-12 45.4 2.0 3.5e-11 42.8 1.2 2.6 2 1 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|73668096|ref|YP_304111.1| - 1.5e-07 31.3 5.2 1.2e-05 25.0 5.2 2.5 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|73668096|ref|YP_304111.1| - 0.037 14.0 5.1 0.11 12.6 0.1 3.1 4 0 0 4 4 4 0 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III PF08545.10 gi|73668096|ref|YP_304111.1| - 0.058 13.3 1.3 0.93 9.4 0.8 2.7 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACP_syn_III_C PF08541.10 gi|73668097|ref|YP_304112.1| - 3.2e-11 43.2 0.0 1.2e-10 41.5 0.0 2.0 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.10 gi|73668097|ref|YP_304112.1| - 1.3e-06 28.2 0.1 0.00018 21.2 0.0 2.5 2 1 1 3 3 3 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.17 gi|73668097|ref|YP_304112.1| - 5.6e-05 23.1 0.3 7.5e-05 22.7 0.3 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal Thiolase_N PF00108.23 gi|73668097|ref|YP_304112.1| - 0.0001 21.8 0.3 0.00025 20.5 0.4 1.5 2 0 0 2 2 2 1 Thiolase, N-terminal domain ACP_syn_III PF08545.10 gi|73668097|ref|YP_304112.1| - 3.3 7.6 6.0 1.7 8.6 2.3 2.2 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HTH_3 PF01381.22 gi|73668098|ref|YP_304113.1| - 1.2e-08 34.8 0.0 4.1e-08 33.2 0.0 2.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|73668098|ref|YP_304113.1| - 1.8e-06 27.9 0.0 5.5e-06 26.3 0.0 1.9 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|73668098|ref|YP_304113.1| - 0.0019 18.5 0.0 0.006 16.9 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|73668098|ref|YP_304113.1| - 0.083 12.9 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_38 PF13936.6 gi|73668098|ref|YP_304113.1| - 0.096 12.5 0.0 0.32 10.8 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Cas_Cas4 PF01930.17 gi|73668099|ref|YP_304114.1| - 3.9e-10 40.1 0.2 7.1e-08 32.7 0.1 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|73668099|ref|YP_304114.1| - 0.024 14.6 0.6 1.1 9.2 0.2 2.3 2 0 0 2 2 2 0 PD-(D/E)XK nuclease superfamily DUF1604 PF07713.13 gi|73668101|ref|YP_304116.1| - 0.18 11.6 1.9 0.43 10.4 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1604) DUF3042 PF11240.8 gi|73668101|ref|YP_304116.1| - 1 9.5 3.7 0.72 9.9 0.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3042) Acetyltransf_10 PF13673.7 gi|73668102|ref|YP_304117.1| - 1.3e-12 47.8 0.1 1.6e-12 47.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73668102|ref|YP_304117.1| - 7.1e-12 45.6 0.1 1.7e-11 44.4 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73668102|ref|YP_304117.1| - 7.6e-11 42.3 0.1 1.3e-10 41.5 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73668102|ref|YP_304117.1| - 4.4e-08 33.0 0.0 6.8e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|73668102|ref|YP_304117.1| - 3.3e-05 24.6 0.0 4.3e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73668102|ref|YP_304117.1| - 0.0007 19.7 0.0 0.0012 18.9 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase GNAT_acetyltran PF12746.7 gi|73668102|ref|YP_304117.1| - 0.0008 19.0 0.4 0.001 18.7 0.4 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_4 PF13420.7 gi|73668102|ref|YP_304117.1| - 0.027 14.6 3.9 0.035 14.2 3.9 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Gly_acyl_tr_C PF08444.10 gi|73668102|ref|YP_304117.1| - 0.043 14.0 0.0 0.1 12.8 0.0 1.6 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region His_biosynth PF00977.21 gi|73668102|ref|YP_304117.1| - 0.052 13.0 0.2 0.065 12.7 0.2 1.1 1 0 0 1 1 1 0 Histidine biosynthesis protein HAD_2 PF13419.6 gi|73668103|ref|YP_304118.1| - 9e-26 91.0 1.2 1.9e-25 90.0 1.2 1.6 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73668103|ref|YP_304118.1| - 1.5e-11 45.0 0.0 3.9e-11 43.7 0.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|73668103|ref|YP_304118.1| - 1.9e-09 37.5 0.0 3e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|73668103|ref|YP_304118.1| - 0.003 18.0 0.1 0.025 15.0 0.1 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|73668103|ref|YP_304118.1| - 0.0065 15.9 0.6 0.19 11.1 0.1 2.5 1 1 2 3 3 3 1 Putative Phosphatase PNK3P PF08645.11 gi|73668103|ref|YP_304118.1| - 0.021 14.5 0.4 0.39 10.4 0.4 2.3 1 1 0 1 1 1 0 Polynucleotide kinase 3 phosphatase Porphobil_deam PF01379.20 gi|73668103|ref|YP_304118.1| - 0.026 14.0 0.0 0.078 12.5 0.0 1.7 2 0 0 2 2 2 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain PGP_phosphatase PF09419.10 gi|73668103|ref|YP_304118.1| - 0.091 12.4 0.0 0.16 11.6 0.0 1.5 1 1 0 1 1 1 0 Mitochondrial PGP phosphatase Hydrolase_3 PF08282.12 gi|73668103|ref|YP_304118.1| - 6.7 6.4 7.2 1.6 8.4 0.3 2.8 1 1 3 4 4 4 0 haloacid dehalogenase-like hydrolase Acetyltransf_10 PF13673.7 gi|73668104|ref|YP_304119.1| - 6.3e-15 55.2 0.1 7.8e-15 54.9 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73668104|ref|YP_304119.1| - 4.2e-12 46.3 0.0 5.3e-12 46.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73668104|ref|YP_304119.1| - 4e-11 43.2 0.1 5.5e-11 42.7 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73668104|ref|YP_304119.1| - 1.7e-10 40.7 0.1 5.7e-09 35.8 0.0 2.1 1 1 1 2 2 2 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|73668104|ref|YP_304119.1| - 0.00025 21.7 0.0 0.00033 21.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73668104|ref|YP_304119.1| - 0.00095 19.2 0.0 0.0016 18.5 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase GNAT_acetyltran PF12746.7 gi|73668104|ref|YP_304119.1| - 0.001 18.7 0.2 0.0016 18.1 0.2 1.2 1 0 0 1 1 1 1 GNAT acetyltransferase Gly_acyl_tr_C PF08444.10 gi|73668104|ref|YP_304119.1| - 0.059 13.6 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region PAPS_reduct PF01507.19 gi|73668105|ref|YP_304120.1| - 5.4e-41 140.5 0.0 9.1e-41 139.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.20 gi|73668105|ref|YP_304120.1| - 6e-20 71.0 0.4 2.9e-19 68.8 0.0 2.2 2 0 0 2 2 2 1 PUA domain Fer4 PF00037.27 gi|73668105|ref|YP_304120.1| - 2.9e-08 33.2 16.1 8.4e-05 22.2 3.9 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73668105|ref|YP_304120.1| - 1.4e-06 28.4 8.9 1.4e-06 28.4 8.9 2.4 3 0 0 3 3 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668105|ref|YP_304120.1| - 3.9e-06 27.3 12.4 3.9e-06 27.3 12.4 2.3 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73668105|ref|YP_304120.1| - 4e-05 23.5 15.4 0.0017 18.3 3.5 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73668105|ref|YP_304120.1| - 5.7e-05 23.1 12.3 0.00022 21.3 12.3 2.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73668105|ref|YP_304120.1| - 0.00011 22.3 13.1 0.00011 22.3 13.1 2.1 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668105|ref|YP_304120.1| - 0.00081 20.3 14.0 0.037 14.9 1.9 3.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|73668105|ref|YP_304120.1| - 0.00085 19.3 1.7 0.00085 19.3 1.7 3.4 4 0 0 4 4 2 1 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73668105|ref|YP_304120.1| - 0.0054 17.1 2.7 0.0054 17.1 2.7 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|73668105|ref|YP_304120.1| - 0.011 16.6 4.7 0.011 16.6 4.7 3.4 3 0 0 3 3 2 0 4Fe-4S binding domain UPF0113 PF03657.13 gi|73668105|ref|YP_304120.1| - 0.02 15.1 0.0 0.044 14.1 0.0 1.6 1 0 0 1 1 1 0 UPF0113 PUA domain Fer4_17 PF13534.6 gi|73668105|ref|YP_304120.1| - 0.06 13.9 12.4 0.76 10.4 2.9 3.0 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73668105|ref|YP_304120.1| - 0.086 13.0 8.4 0.42 10.8 8.4 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|73668105|ref|YP_304120.1| - 0.097 13.5 6.9 5.5 7.9 0.6 2.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73668105|ref|YP_304120.1| - 4.5 7.9 12.6 1 9.9 4.0 3.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I IMS PF00817.20 gi|73668106|ref|YP_304121.1| - 4.6e-40 137.1 0.1 7.4e-40 136.4 0.1 1.3 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 gi|73668106|ref|YP_304121.1| - 3e-12 47.3 0.5 7.1e-12 46.1 0.4 1.7 2 0 0 2 2 2 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|73668106|ref|YP_304121.1| - 4.1e-10 39.4 0.6 1e-09 38.1 0.1 2.0 2 0 0 2 2 2 1 IMS family HHH motif DNA_pol_lambd_f PF10391.9 gi|73668106|ref|YP_304121.1| - 0.00094 19.0 0.0 0.0024 17.7 0.0 1.6 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|73668106|ref|YP_304121.1| - 0.0061 16.8 0.0 0.014 15.6 0.0 1.6 1 0 0 1 1 1 1 Pathogenicity locus DUF1805 PF08827.11 gi|73668106|ref|YP_304121.1| - 0.0075 16.6 0.1 0.92 9.9 0.0 2.9 3 0 0 3 3 3 1 Domain of unknown function (DUF1805) DUF4170 PF13773.6 gi|73668106|ref|YP_304121.1| - 0.045 13.9 0.0 0.37 11.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4170) NAS PF03059.16 gi|73668107|ref|YP_304122.1| - 1.5e-35 122.9 0.0 2.5e-35 122.1 0.0 1.3 1 1 0 1 1 1 1 Nicotianamine synthase protein Synapsin_N PF10581.9 gi|73668107|ref|YP_304122.1| - 0.0072 16.3 0.1 0.017 15.1 0.1 1.6 1 0 0 1 1 1 1 Synapsin N-terminal NAS PF03059.16 gi|73668108|ref|YP_304123.1| - 6e-19 68.4 0.0 8e-19 68.0 0.0 1.3 1 0 0 1 1 1 1 Nicotianamine synthase protein Methyltransf_31 PF13847.6 gi|73668108|ref|YP_304123.1| - 0.0094 15.7 0.0 0.014 15.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|73668108|ref|YP_304123.1| - 0.056 13.2 0.0 0.08 12.7 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_3 PF01596.17 gi|73668108|ref|YP_304123.1| - 0.065 12.4 0.0 0.093 11.9 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_25 PF13649.6 gi|73668108|ref|YP_304123.1| - 0.1 13.3 0.0 0.19 12.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PDGLE PF13190.6 gi|73668110|ref|YP_304125.1| - 2.5e-15 56.1 1.1 3.3e-15 55.8 1.1 1.1 1 0 0 1 1 1 1 PDGLE domain MHYT PF03707.16 gi|73668110|ref|YP_304125.1| - 0.03 14.5 0.3 0.5 10.6 0.0 2.1 2 0 0 2 2 2 0 Bacterial signalling protein N terminal repeat DUF4999 PF16390.5 gi|73668110|ref|YP_304125.1| - 0.13 12.5 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function OppC_N PF12911.7 gi|73668110|ref|YP_304125.1| - 0.28 11.2 0.1 0.28 11.2 0.1 1.7 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C Gram_pos_anchor PF00746.21 gi|73668110|ref|YP_304125.1| - 4 7.5 7.9 11 6.0 0.8 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif DUF3792 PF12670.7 gi|73668111|ref|YP_304126.1| - 2.4e-06 27.7 4.2 2.4e-06 27.7 4.2 2.5 1 1 1 2 2 2 1 Protein of unknown function (DUF3792) DUF5518 PF17647.1 gi|73668111|ref|YP_304126.1| - 3.9e-05 23.8 5.8 3.9e-05 23.8 5.8 2.2 2 0 0 2 2 2 1 Family of unknown function (DUF5518) Sigma_reg_N PF13800.6 gi|73668111|ref|YP_304126.1| - 4 7.8 7.4 0.94 9.8 0.1 2.9 3 0 0 3 3 3 0 Sigma factor regulator N-terminal DUF5518 PF17647.1 gi|73668112|ref|YP_304127.1| - 0.00077 19.6 9.8 0.00077 19.6 9.8 2.2 2 0 0 2 2 2 1 Family of unknown function (DUF5518) DUF2207 PF09972.9 gi|73668112|ref|YP_304127.1| - 0.023 13.5 2.6 0.048 12.4 2.4 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4337 PF14235.6 gi|73668112|ref|YP_304127.1| - 0.031 14.4 0.0 0.064 13.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) P16-Arc PF04699.14 gi|73668112|ref|YP_304127.1| - 0.35 11.4 4.0 0.24 11.9 0.4 2.1 2 0 0 2 2 2 0 ARP2/3 complex 16 kDa subunit (p16-Arc) DDE_Tnp_IS240 PF13610.6 gi|73668113|ref|YP_304128.1| - 9.3e-15 55.1 0.6 2.4e-14 53.8 0.2 1.7 2 0 0 2 2 2 1 DDE domain DDE_Tnp_IS66 PF03050.14 gi|73668113|ref|YP_304128.1| - 0.00026 20.6 0.1 0.00029 20.4 0.1 1.1 1 0 0 1 1 1 1 Transposase IS66 family Imm-NTF2 PF15655.6 gi|73668113|ref|YP_304128.1| - 0.022 15.0 1.0 0.022 15.0 1.0 1.5 2 0 0 2 2 2 0 NTF2 fold immunity protein rve PF00665.26 gi|73668113|ref|YP_304128.1| - 0.036 14.3 0.0 0.072 13.3 0.0 1.5 1 0 0 1 1 1 0 Integrase core domain HhH-GPD PF00730.25 gi|73668114|ref|YP_304129.1| - 8.8e-23 80.8 0.1 1.2e-22 80.4 0.1 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|73668114|ref|YP_304129.1| - 6.3e-10 38.4 0.1 2.1e-09 36.7 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|73668114|ref|YP_304129.1| - 0.00046 20.7 0.1 0.063 13.9 0.0 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.9 gi|73668114|ref|YP_304129.1| - 0.0036 17.6 4.9 0.0058 16.9 4.9 1.3 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III 5_3_exonuc PF01367.20 gi|73668114|ref|YP_304129.1| - 0.0084 16.7 0.1 0.039 14.5 0.0 2.0 1 1 1 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_8 PF14716.6 gi|73668114|ref|YP_304129.1| - 0.012 15.9 0.0 0.027 14.8 0.0 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix domain bacHORMA_1 PF18138.1 gi|73668114|ref|YP_304129.1| - 0.014 15.3 0.0 0.031 14.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial HORMA domain family 1 DUF2400 PF09674.10 gi|73668114|ref|YP_304129.1| - 0.06 13.3 0.1 0.31 11.0 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) Pyr_redox_2 PF07992.14 gi|73668115|ref|YP_304130.1| - 5.9e-56 189.9 1.2 8e-56 189.4 1.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|73668115|ref|YP_304130.1| - 1.3e-20 73.8 2.6 2.6e-18 66.4 0.1 3.2 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|73668115|ref|YP_304130.1| - 4.5e-16 59.1 0.0 1e-15 57.9 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|73668115|ref|YP_304130.1| - 3.1e-11 43.1 4.4 3.3e-10 39.7 0.2 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|73668115|ref|YP_304130.1| - 5.3e-06 25.9 2.0 0.001 18.4 0.2 3.3 3 0 0 3 3 3 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|73668115|ref|YP_304130.1| - 6.2e-05 23.0 0.6 0.35 10.7 0.1 2.4 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 gi|73668115|ref|YP_304130.1| - 0.00011 22.4 1.2 0.68 10.2 0.3 2.7 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|73668115|ref|YP_304130.1| - 0.00016 20.5 2.9 0.64 8.6 0.2 3.2 2 1 1 3 3 3 2 HI0933-like protein GDI PF00996.18 gi|73668115|ref|YP_304130.1| - 0.00076 18.1 0.1 0.0036 15.9 0.0 2.0 2 0 0 2 2 2 1 GDP dissociation inhibitor FAD_binding_2 PF00890.24 gi|73668115|ref|YP_304130.1| - 0.00092 18.4 1.9 0.0071 15.5 0.3 2.4 2 1 1 3 3 3 1 FAD binding domain Lycopene_cycl PF05834.12 gi|73668115|ref|YP_304130.1| - 0.0013 17.8 0.1 0.1 11.6 0.1 2.2 2 0 0 2 2 2 1 Lycopene cyclase protein FAD_oxidored PF12831.7 gi|73668115|ref|YP_304130.1| - 0.0016 17.8 1.2 1.1 8.6 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase 2-Hacid_dh_C PF02826.19 gi|73668115|ref|YP_304130.1| - 0.0033 16.8 0.4 1.9 7.8 0.1 2.5 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thi4 PF01946.17 gi|73668115|ref|YP_304130.1| - 0.005 16.1 1.5 0.013 14.7 0.1 2.3 2 1 0 2 2 2 1 Thi4 family F420_oxidored PF03807.17 gi|73668115|ref|YP_304130.1| - 0.0066 17.0 2.9 1.8 9.2 0.4 2.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent FAD_binding_3 PF01494.19 gi|73668115|ref|YP_304130.1| - 0.014 14.7 0.4 4.1 6.5 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.22 gi|73668115|ref|YP_304130.1| - 0.015 14.4 0.1 0.52 9.3 0.1 2.6 3 0 0 3 3 3 0 Glucose inhibited division protein A DAO PF01266.24 gi|73668115|ref|YP_304130.1| - 0.017 14.7 7.8 0.19 11.3 0.0 3.1 2 1 1 3 3 3 0 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|73668115|ref|YP_304130.1| - 0.045 13.3 0.4 6.5 6.3 0.2 2.5 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|73668115|ref|YP_304130.1| - 0.047 13.9 0.6 4.5 7.6 0.2 2.9 2 0 0 2 2 2 0 TrkA-N domain Sacchrp_dh_NADP PF03435.18 gi|73668115|ref|YP_304130.1| - 0.053 13.8 2.3 2.5 8.3 0.0 2.7 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain XdhC_C PF13478.6 gi|73668115|ref|YP_304130.1| - 0.063 13.8 0.0 8.8 6.9 0.0 2.4 2 0 0 2 2 2 0 XdhC Rossmann domain NAD_binding_9 PF13454.6 gi|73668115|ref|YP_304130.1| - 0.063 13.3 0.1 0.64 10.0 0.0 2.6 2 1 1 3 3 3 0 FAD-NAD(P)-binding PrpR_N PF06506.11 gi|73668115|ref|YP_304130.1| - 0.068 12.8 0.4 0.32 10.6 0.3 2.0 1 1 1 2 2 2 0 Propionate catabolism activator Trp_halogenase PF04820.14 gi|73668115|ref|YP_304130.1| - 0.069 12.0 0.9 2.9 6.6 0.2 2.2 2 0 0 2 2 2 0 Tryptophan halogenase AICARFT_IMPCHas PF01808.18 gi|73668116|ref|YP_304131.1| - 2.4e-99 332.6 0.0 3e-99 332.2 0.0 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 gi|73668116|ref|YP_304131.1| - 9.7e-27 93.0 0.0 1.8e-26 92.1 0.0 1.5 1 0 0 1 1 1 1 MGS-like domain CitMHS PF03600.16 gi|73668118|ref|YP_304133.1| - 3.4e-35 121.7 23.2 3.4e-35 121.7 23.2 1.8 1 1 1 2 2 2 1 Citrate transporter MMR_HSR1_Xtn PF16897.5 gi|73668119|ref|YP_304134.1| - 7.3e-35 119.2 1.0 1.4e-34 118.3 1.0 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|73668119|ref|YP_304134.1| - 2e-20 73.0 0.0 3.9e-20 72.0 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 gi|73668119|ref|YP_304134.1| - 2.3e-17 62.8 0.0 4.3e-17 61.9 0.0 1.5 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|73668119|ref|YP_304134.1| - 1.6e-11 44.0 1.4 3.4e-11 42.9 0.1 2.1 2 1 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|73668119|ref|YP_304134.1| - 0.00013 21.9 2.0 0.13 12.2 0.3 2.9 2 2 1 3 3 3 2 RsgA GTPase Dynamin_N PF00350.23 gi|73668119|ref|YP_304134.1| - 0.00091 19.3 1.9 0.14 12.2 0.3 3.0 2 1 1 3 3 3 1 Dynamin family DUF2481 PF10654.9 gi|73668119|ref|YP_304134.1| - 0.017 15.1 0.0 0.032 14.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) AIG1 PF04548.16 gi|73668119|ref|YP_304134.1| - 0.02 14.2 0.3 0.035 13.4 0.0 1.5 2 0 0 2 2 2 0 AIG1 family YchF-GTPase_C PF06071.13 gi|73668119|ref|YP_304134.1| - 0.096 12.9 0.1 1.1 9.5 0.1 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF933) SRPRB PF09439.10 gi|73668119|ref|YP_304134.1| - 0.1 12.0 0.1 0.34 10.3 0.0 1.9 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 gi|73668119|ref|YP_304134.1| - 0.13 12.7 0.2 0.3 11.4 0.2 1.7 1 0 0 1 1 1 0 AAA ATPase domain FlxA PF14282.6 gi|73668119|ref|YP_304134.1| - 0.94 9.5 5.2 2.3 8.2 3.6 1.9 1 1 1 2 2 2 0 FlxA-like protein DUF1192 PF06698.11 gi|73668119|ref|YP_304134.1| - 3.1 7.9 7.2 0.4 10.8 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) PBP_like PF12727.7 gi|73668120|ref|YP_304135.1| - 3.6e-48 163.2 0.0 5.6e-48 162.6 0.0 1.2 1 0 0 1 1 1 1 PBP superfamily domain MoeA_N PF03453.17 gi|73668120|ref|YP_304135.1| - 1e-45 155.3 0.4 3.4e-45 153.6 0.3 1.8 2 0 0 2 2 2 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|73668120|ref|YP_304135.1| - 2.3e-26 92.2 0.0 3.9e-26 91.4 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|73668120|ref|YP_304135.1| - 4e-15 55.7 0.1 1.6e-14 53.8 0.0 2.2 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) T2SSE PF00437.20 gi|73668120|ref|YP_304135.1| - 0.002 17.3 0.0 0.0033 16.5 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein Phosphonate-bd PF12974.7 gi|73668120|ref|YP_304135.1| - 0.048 13.2 0.0 0.13 11.9 0.0 1.6 2 0 0 2 2 2 0 ABC transporter, phosphonate, periplasmic substrate-binding protein Aminotran_4 PF01063.19 gi|73668121|ref|YP_304136.1| - 8.3e-56 189.3 0.0 9.6e-56 189.1 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV Ig_J_chain PF15097.6 gi|73668121|ref|YP_304136.1| - 0.08 12.8 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin J chain DsbD_2 PF13386.6 gi|73668122|ref|YP_304137.1| - 5.7e-15 55.8 22.3 9.6e-15 55.0 22.3 1.3 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Fer4 PF00037.27 gi|73668123|ref|YP_304138.1| - 2.3e-07 30.3 23.7 4.5e-05 23.1 1.5 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_5 PF12801.7 gi|73668123|ref|YP_304138.1| - 3.4e-06 26.9 18.5 4.5e-05 23.3 8.9 5.7 7 0 0 7 7 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73668123|ref|YP_304138.1| - 4e-05 23.5 19.5 0.001 19.1 1.8 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73668123|ref|YP_304138.1| - 0.00016 22.6 16.9 0.00058 20.8 1.2 3.5 4 0 0 4 4 3 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|73668123|ref|YP_304138.1| - 0.00029 21.0 12.8 0.00029 21.0 12.8 2.2 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73668123|ref|YP_304138.1| - 0.00051 20.1 27.8 0.0008 19.5 15.7 2.8 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73668123|ref|YP_304138.1| - 0.00051 20.1 9.9 0.00051 20.1 9.9 2.6 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668123|ref|YP_304138.1| - 0.00098 19.1 1.7 0.00098 19.1 1.7 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73668123|ref|YP_304138.1| - 0.0012 19.3 16.9 0.022 15.3 13.9 3.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_19 PF06902.11 gi|73668123|ref|YP_304138.1| - 0.004 17.2 2.6 0.0073 16.4 2.6 1.3 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4_17 PF13534.6 gi|73668123|ref|YP_304138.1| - 0.013 16.0 15.3 3 8.4 13.1 3.0 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73668123|ref|YP_304138.1| - 0.03 14.8 15.1 0.88 10.2 2.9 2.9 1 1 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|73668123|ref|YP_304138.1| - 0.22 12.3 9.9 2 9.2 9.9 2.2 1 1 0 1 1 1 0 4Fe-4S single cluster domain DUF4231 PF14015.6 gi|73668123|ref|YP_304138.1| - 0.52 10.8 5.3 3.5 8.1 0.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) Fer4_8 PF13183.6 gi|73668123|ref|YP_304138.1| - 3.9 8.0 21.2 0.26 11.8 3.1 2.9 3 1 1 4 4 3 0 4Fe-4S dicluster domain PspC PF04024.12 gi|73668124|ref|YP_304139.1| - 2.7e-21 75.1 0.3 3.6e-21 74.7 0.3 1.2 1 0 0 1 1 1 1 PspC domain ArsP_1 PF03773.13 gi|73668125|ref|YP_304140.1| - 1.8e-53 181.6 0.3 3.2e-53 180.8 0.3 1.3 1 1 0 1 1 1 1 Predicted permease Phage_holin_2_4 PF16082.5 gi|73668125|ref|YP_304140.1| - 0.27 11.0 1.8 0.9 9.3 1.8 1.9 1 0 0 1 1 1 0 Bacteriophage holin family, superfamily II-like DUF2842 PF11003.8 gi|73668125|ref|YP_304140.1| - 4.8 7.5 6.0 29 5.0 1.0 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2842) HTH_5 PF01022.20 gi|73668126|ref|YP_304141.1| - 3.5e-16 58.8 1.0 6.6e-16 57.9 1.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73668126|ref|YP_304141.1| - 1.5e-10 41.0 0.5 2.9e-10 40.0 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Arg_repressor PF01316.21 gi|73668126|ref|YP_304141.1| - 0.00019 21.1 0.1 0.00041 20.0 0.1 1.5 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain HTH_34 PF13601.6 gi|73668126|ref|YP_304141.1| - 0.0037 17.4 0.1 0.0066 16.6 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|73668126|ref|YP_304141.1| - 0.0069 16.3 0.0 0.013 15.4 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|73668126|ref|YP_304141.1| - 0.026 14.4 0.9 0.071 13.0 0.6 1.9 1 1 1 2 2 2 0 MarR family HTH_1 PF00126.27 gi|73668126|ref|YP_304141.1| - 0.076 13.0 0.2 0.3 11.1 0.1 2.0 2 1 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family MarR PF01047.22 gi|73668126|ref|YP_304141.1| - 0.083 12.8 0.3 0.21 11.5 0.3 1.6 1 0 0 1 1 1 0 MarR family Peptidase_C39_2 PF13529.6 gi|73668127|ref|YP_304142.1| - 4.6e-17 62.9 0.0 6.9e-17 62.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|73668127|ref|YP_304142.1| - 1.5e-14 54.2 0.0 2.4e-14 53.6 0.0 1.3 1 0 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 Peptidase_C39 PF03412.15 gi|73668127|ref|YP_304142.1| - 3.9e-09 36.4 0.0 9.8e-09 35.1 0.0 1.6 1 1 0 1 1 1 1 Peptidase C39 family DUF3335 PF11814.8 gi|73668127|ref|YP_304142.1| - 2.7e-08 33.5 0.4 0.00078 19.0 0.0 2.2 1 1 1 2 2 2 2 Peptidase_C39 like family Guanylate_cyc_2 PF09778.9 gi|73668127|ref|YP_304142.1| - 0.0021 17.4 0.0 0.56 9.5 0.0 2.3 2 0 0 2 2 2 2 Guanylylate cyclase BtrH_N PF14399.6 gi|73668127|ref|YP_304142.1| - 0.034 14.4 0.0 0.063 13.5 0.0 1.5 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal CbiQ PF02361.16 gi|73668128|ref|YP_304143.1| - 3.5e-36 124.9 12.0 3.5e-36 124.9 12.0 1.4 2 0 0 2 2 2 1 Cobalt transport protein ABC_tran PF00005.27 gi|73668129|ref|YP_304144.1| - 5.8e-29 101.4 0.0 8.9e-29 100.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668129|ref|YP_304144.1| - 3.1e-05 24.0 0.1 0.0016 18.3 0.0 2.1 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|73668129|ref|YP_304144.1| - 0.0048 17.3 0.0 0.007 16.8 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain MeaB PF03308.16 gi|73668129|ref|YP_304144.1| - 0.014 14.4 0.0 0.028 13.4 0.0 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 gi|73668129|ref|YP_304144.1| - 0.055 13.2 0.1 0.12 12.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NTPase_1 PF03266.15 gi|73668129|ref|YP_304144.1| - 0.066 13.1 0.0 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 gi|73668129|ref|YP_304144.1| - 0.085 12.8 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase ATP_bind_1 PF03029.17 gi|73668129|ref|YP_304144.1| - 0.086 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_14 PF13173.6 gi|73668129|ref|YP_304144.1| - 0.094 12.7 0.0 9.1 6.3 0.0 2.6 2 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|73668129|ref|YP_304144.1| - 0.12 11.7 0.0 0.25 10.6 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_25 PF13481.6 gi|73668129|ref|YP_304144.1| - 0.24 11.0 0.7 3.5 7.2 0.7 2.8 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|73668130|ref|YP_304145.1| - 8.7e-26 91.1 0.0 1.7e-25 90.1 0.0 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|73668130|ref|YP_304145.1| - 1.6e-10 40.8 0.1 1.7e-06 27.6 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73668130|ref|YP_304145.1| - 8.4e-09 35.6 0.3 0.0011 18.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73668130|ref|YP_304145.1| - 0.00037 20.8 0.1 0.015 15.6 0.1 2.7 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|73668130|ref|YP_304145.1| - 0.0058 16.2 0.1 0.015 14.9 0.1 1.6 2 0 0 2 2 2 1 AAA domain Zot PF05707.12 gi|73668130|ref|YP_304145.1| - 0.0065 16.1 0.0 2.9 7.5 0.0 2.2 2 0 0 2 2 2 2 Zonular occludens toxin (Zot) AAA_29 PF13555.6 gi|73668130|ref|YP_304145.1| - 0.0086 15.8 0.1 0.017 14.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain MeaB PF03308.16 gi|73668130|ref|YP_304145.1| - 0.016 14.2 0.0 0.025 13.6 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RecA PF00154.21 gi|73668130|ref|YP_304145.1| - 0.033 13.7 0.2 4.9 6.5 0.0 2.3 1 1 1 2 2 2 0 recA bacterial DNA recombination protein CbiA PF01656.23 gi|73668130|ref|YP_304145.1| - 0.037 14.1 0.0 0.056 13.5 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_15 PF13175.6 gi|73668130|ref|YP_304145.1| - 0.038 13.7 0.2 0.051 13.3 0.0 1.3 2 0 0 2 2 2 0 AAA ATPase domain AAA_5 PF07728.14 gi|73668130|ref|YP_304145.1| - 0.052 13.6 0.0 0.54 10.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Fer4_NifH PF00142.18 gi|73668130|ref|YP_304145.1| - 0.07 12.6 0.1 0.12 11.8 0.1 1.3 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_24 PF13479.6 gi|73668130|ref|YP_304145.1| - 0.086 12.6 0.5 0.21 11.3 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|73668130|ref|YP_304145.1| - 0.11 12.9 0.0 0.21 11.9 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 gi|73668130|ref|YP_304145.1| - 0.12 13.0 0.9 0.29 11.7 0.4 1.8 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|73668130|ref|YP_304145.1| - 0.14 11.7 0.0 0.25 10.9 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ParA PF10609.9 gi|73668130|ref|YP_304145.1| - 0.16 11.4 0.1 0.31 10.5 0.1 1.4 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase BioY PF02632.14 gi|73668131|ref|YP_304146.1| - 5.2e-42 143.1 15.5 8.7e-42 142.4 15.5 1.3 1 0 0 1 1 1 1 BioY family COX7a PF02238.15 gi|73668131|ref|YP_304146.1| - 0.27 11.6 4.7 14 6.2 0.0 3.4 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VII DUF2269 PF10027.9 gi|73668131|ref|YP_304146.1| - 0.33 11.0 4.3 0.23 11.5 1.3 2.2 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2269) Acetyltransf_1 PF00583.25 gi|73668132|ref|YP_304147.1| - 1.2e-12 48.1 0.0 1.5e-12 47.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|73668132|ref|YP_304147.1| - 3.4e-10 39.9 0.0 4.6e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73668132|ref|YP_304147.1| - 4.6e-10 39.8 0.0 7.8e-10 39.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73668132|ref|YP_304147.1| - 4.2e-05 23.6 0.0 6.7e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 gi|73668132|ref|YP_304147.1| - 0.00099 19.8 0.0 0.0013 19.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|73668132|ref|YP_304147.1| - 0.0014 18.7 0.0 0.0019 18.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73668132|ref|YP_304147.1| - 0.013 15.6 0.0 0.18 11.9 0.0 2.1 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73668132|ref|YP_304147.1| - 0.031 14.3 0.0 0.071 13.1 0.0 1.7 1 1 0 1 1 1 0 FR47-like protein Acetyltransf_6 PF13480.7 gi|73668132|ref|YP_304147.1| - 0.071 13.3 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain G2BR PF18442.1 gi|73668132|ref|YP_304147.1| - 0.08 12.6 0.5 0.08 12.6 0.5 1.8 2 0 0 2 2 2 0 E3 gp78 Ube2g2-binding region (G2BR) Fe_dep_repr_C PF02742.15 gi|73668133|ref|YP_304148.1| - 4.5e-27 93.9 0.1 1e-26 92.8 0.1 1.6 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|73668133|ref|YP_304148.1| - 2.8e-22 78.7 0.2 9.2e-22 77.0 0.1 2.0 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.14 gi|73668133|ref|YP_304148.1| - 1.5e-13 50.8 0.2 4e-13 49.4 0.4 1.6 2 0 0 2 2 1 1 FeoA domain HTH_24 PF13412.6 gi|73668133|ref|YP_304148.1| - 5.2e-08 32.3 0.0 2.1e-07 30.4 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|73668133|ref|YP_304148.1| - 1e-07 31.7 0.0 2.1e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|73668133|ref|YP_304148.1| - 2.6e-07 30.5 0.0 6.4e-07 29.2 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|73668133|ref|YP_304148.1| - 4.9e-07 29.5 0.0 8.4e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|73668133|ref|YP_304148.1| - 7.2e-06 25.9 0.0 1.6e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|73668133|ref|YP_304148.1| - 1.2e-05 25.1 0.0 2.4e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|73668133|ref|YP_304148.1| - 2.8e-05 24.4 0.0 9.4e-05 22.7 0.0 1.9 1 1 1 2 2 2 1 Transcriptional regulator HTH_27 PF13463.6 gi|73668133|ref|YP_304148.1| - 0.00014 22.3 0.0 0.00029 21.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|73668133|ref|YP_304148.1| - 0.0011 18.7 0.0 0.002 17.9 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|73668133|ref|YP_304148.1| - 0.0022 17.9 0.0 0.0057 16.6 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain GntR PF00392.21 gi|73668133|ref|YP_304148.1| - 0.003 17.2 0.0 0.0085 15.7 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HrcA_DNA-bdg PF03444.15 gi|73668133|ref|YP_304148.1| - 0.0031 17.1 0.0 0.0064 16.1 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DUF2250 PF10007.9 gi|73668133|ref|YP_304148.1| - 0.0048 17.0 0.2 0.0086 16.2 0.2 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_micro PF17007.5 gi|73668133|ref|YP_304148.1| - 0.0083 15.0 0.2 0.011 14.6 0.2 1.2 1 0 0 1 1 1 1 HTH-like HTH_AsnC-type PF13404.6 gi|73668133|ref|YP_304148.1| - 0.0095 15.7 0.0 0.018 14.8 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|73668133|ref|YP_304148.1| - 0.011 15.5 0.0 0.021 14.6 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain AbiEi_4 PF13338.6 gi|73668133|ref|YP_304148.1| - 0.04 14.1 0.0 0.072 13.3 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin GerE PF00196.19 gi|73668133|ref|YP_304148.1| - 0.042 13.4 0.1 0.7 9.5 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family Rio2_N PF09202.11 gi|73668133|ref|YP_304148.1| - 0.056 13.7 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 Rio2, N-terminal HTH_12 PF08461.10 gi|73668133|ref|YP_304148.1| - 0.061 13.3 0.0 0.22 11.5 0.0 1.9 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_45 PF14947.6 gi|73668133|ref|YP_304148.1| - 0.087 12.8 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix TFIIE_alpha PF02002.17 gi|73668133|ref|YP_304148.1| - 0.088 12.7 0.0 0.22 11.4 0.0 1.6 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_10 PF04967.12 gi|73668133|ref|YP_304148.1| - 0.093 12.6 0.0 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 HTH DNA binding domain HTH_23 PF13384.6 gi|73668133|ref|YP_304148.1| - 0.11 12.4 0.0 0.24 11.3 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_6 PF01418.17 gi|73668133|ref|YP_304148.1| - 0.13 12.2 0.0 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family FeoC PF09012.10 gi|73668133|ref|YP_304148.1| - 0.13 12.3 0.0 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 FeoC like transcriptional regulator FeoB_N PF02421.18 gi|73668134|ref|YP_304149.1| - 1.6e-55 186.9 0.3 2.9e-55 186.1 0.3 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|73668134|ref|YP_304149.1| - 1.7e-27 95.9 18.5 8.1e-14 51.9 8.6 2.8 2 0 0 2 2 2 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|73668134|ref|YP_304149.1| - 1.2e-19 70.4 0.1 2.3e-19 69.6 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|73668134|ref|YP_304149.1| - 1.6e-14 53.3 0.5 1.6e-14 53.3 0.5 3.0 3 0 0 3 3 3 1 Ferrous iron transport protein B C terminus Dynamin_N PF00350.23 gi|73668134|ref|YP_304149.1| - 0.00036 20.6 1.4 0.012 15.7 0.0 2.3 1 1 1 2 2 2 1 Dynamin family AIG1 PF04548.16 gi|73668134|ref|YP_304149.1| - 0.00061 19.2 0.0 0.0011 18.4 0.0 1.3 1 0 0 1 1 1 1 AIG1 family SRPRB PF09439.10 gi|73668134|ref|YP_304149.1| - 0.016 14.7 0.0 0.028 13.9 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit ATP_bind_1 PF03029.17 gi|73668134|ref|YP_304149.1| - 0.065 13.0 0.2 0.2 11.4 0.1 1.8 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein VASP_tetra PF08776.11 gi|73668136|ref|YP_304151.1| - 0.19 11.3 6.3 13 5.4 0.1 3.7 2 1 1 3 3 3 0 VASP tetramerisation domain DrrA_P4M PF14860.6 gi|73668136|ref|YP_304151.1| - 0.27 11.1 2.1 7.1 6.5 0.1 2.7 2 1 0 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain RAC_head PF16717.5 gi|73668136|ref|YP_304151.1| - 4.6 8.3 6.2 8.4 7.4 0.4 2.8 2 1 0 2 2 2 0 Ribosome-associated complex head domain SMC_N PF02463.19 gi|73668137|ref|YP_304152.1| - 1.3e-69 234.0 12.1 5.3e-69 232.0 12.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|73668137|ref|YP_304152.1| - 1.1e-32 112.8 0.1 6.2e-32 110.3 0.0 2.4 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain AAA_23 PF13476.6 gi|73668137|ref|YP_304152.1| - 5.2e-15 56.5 13.1 5.2e-15 56.5 13.1 6.6 2 2 1 3 3 3 1 AAA domain AAA_15 PF13175.6 gi|73668137|ref|YP_304152.1| - 5.2e-10 39.6 22.5 5.2e-10 39.6 22.5 4.0 2 2 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 gi|73668137|ref|YP_304152.1| - 1.1e-08 35.3 13.3 2.2e-05 24.4 0.4 3.7 3 2 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|73668137|ref|YP_304152.1| - 7.3e-07 28.8 0.0 1.6e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain APG6_N PF17675.1 gi|73668137|ref|YP_304152.1| - 0.038 14.5 123.4 0.47 11.0 20.9 8.6 2 2 7 9 9 9 0 Apg6 coiled-coil region Fez1 PF06818.15 gi|73668137|ref|YP_304152.1| - 1.1 9.7 98.2 0.19 12.2 4.6 6.2 2 2 5 7 7 7 0 Fez1 ABC_tran PF00005.27 gi|73668137|ref|YP_304152.1| - 2.5 8.6 0.0 2.5 8.6 0.0 5.7 3 2 1 4 4 4 0 ABC transporter SMC_ScpA PF02616.14 gi|73668138|ref|YP_304153.1| - 6.4e-16 59.0 0.4 1.3e-09 38.4 0.0 2.1 2 0 0 2 2 2 2 Segregation and condensation protein ScpA SMC_ScpB PF04079.16 gi|73668139|ref|YP_304154.1| - 3.7e-38 130.7 0.1 9.6e-38 129.3 0.0 1.7 2 0 0 2 2 2 1 Segregation and condensation complex subunit ScpB EnY2 PF10163.9 gi|73668139|ref|YP_304154.1| - 0.00029 21.1 1.0 0.0019 18.5 0.1 2.9 4 1 1 5 5 5 1 Transcription factor e(y)2 HTH_20 PF12840.7 gi|73668139|ref|YP_304154.1| - 0.0046 17.0 0.0 0.23 11.5 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|73668139|ref|YP_304154.1| - 0.064 13.8 0.3 2.1 8.9 0.0 3.1 4 0 0 4 4 4 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|73668139|ref|YP_304154.1| - 0.076 13.0 0.5 5.3 7.1 0.1 3.8 4 1 1 5 5 5 0 Helix-turn-helix domain HTH_15 PF12324.8 gi|73668139|ref|YP_304154.1| - 0.12 12.4 0.0 0.44 10.5 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase TBP PF00352.21 gi|73668140|ref|YP_304155.1| - 3.6e-55 183.9 0.2 6.2e-27 93.4 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|73668140|ref|YP_304155.1| - 5.2e-08 32.9 0.0 0.0045 17.1 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NdhS PF11623.8 gi|73668140|ref|YP_304155.1| - 0.0013 18.4 0.0 1.1 8.9 0.0 2.5 2 0 0 2 2 2 2 NAD(P)H dehydrogenase subunit S RTT107_BRCT_5 PF16770.5 gi|73668140|ref|YP_304155.1| - 0.042 13.7 0.1 0.082 12.8 0.1 1.4 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain Glycos_transf_2 PF00535.26 gi|73668141|ref|YP_304156.1| - 4.6e-16 59.1 0.0 6.8e-16 58.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73668141|ref|YP_304156.1| - 3.5e-05 23.8 0.0 8.9e-05 22.5 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Bmp PF02608.14 gi|73668141|ref|YP_304156.1| - 0.033 13.2 0.2 0.05 12.6 0.2 1.2 1 0 0 1 1 1 0 ABC transporter substrate-binding protein PnrA-like Glyco_tranf_2_4 PF13704.6 gi|73668141|ref|YP_304156.1| - 0.04 14.4 0.0 0.096 13.2 0.0 1.7 2 0 0 2 2 2 0 Glycosyl transferase family 2 SUR7 PF06687.12 gi|73668141|ref|YP_304156.1| - 0.079 12.6 0.5 0.12 12.0 0.5 1.2 1 0 0 1 1 1 0 SUR7/PalI family ThiC_Rad_SAM PF01964.18 gi|73668142|ref|YP_304157.1| - 8.8e-178 591.3 0.9 1e-177 591.2 0.9 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family DNA_binding_1 PF01035.20 gi|73668143|ref|YP_304158.1| - 1.1e-32 112.0 0.0 1.5e-32 111.6 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 gi|73668143|ref|YP_304158.1| - 2.7e-10 40.9 0.0 5.3e-10 40.0 0.0 1.5 1 1 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Fer4_16 PF13484.6 gi|73668144|ref|YP_304159.1| - 0.014 16.3 3.5 0.047 14.6 3.5 1.9 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|73668144|ref|YP_304159.1| - 0.029 14.2 0.8 0.029 14.2 0.8 2.7 3 0 0 3 3 3 0 4Fe-4S binding domain ABC_tran PF00005.27 gi|73668145|ref|YP_304160.1| - 1.2e-30 106.8 0.3 2.5e-30 105.8 0.0 1.6 2 1 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|73668145|ref|YP_304160.1| - 1.9e-15 57.5 0.3 3.8e-10 40.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73668145|ref|YP_304160.1| - 0.0013 19.0 0.3 0.075 13.3 0.3 3.1 1 1 0 1 1 1 1 AAA domain DUF4162 PF13732.6 gi|73668145|ref|YP_304160.1| - 0.0017 19.0 1.3 0.015 16.0 1.0 2.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_29 PF13555.6 gi|73668145|ref|YP_304160.1| - 0.0055 16.4 0.2 0.03 14.1 0.1 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|73668145|ref|YP_304160.1| - 0.012 15.6 0.8 5.6 7.1 0.1 2.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase SMC_N PF02463.19 gi|73668145|ref|YP_304160.1| - 0.013 14.9 0.4 4.3 6.7 0.1 2.4 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Rad17 PF03215.15 gi|73668145|ref|YP_304160.1| - 0.029 14.3 0.2 0.052 13.5 0.1 1.6 1 1 0 1 1 1 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|73668145|ref|YP_304160.1| - 0.049 13.5 0.2 0.14 12.1 0.1 1.9 2 0 0 2 2 2 0 RsgA GTPase AAA_15 PF13175.6 gi|73668145|ref|YP_304160.1| - 0.052 13.2 6.2 4.3 6.9 0.0 2.8 2 1 1 3 3 3 0 AAA ATPase domain Arf PF00025.21 gi|73668145|ref|YP_304160.1| - 0.083 12.3 0.1 1.1 8.7 0.0 2.3 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA PF00004.29 gi|73668145|ref|YP_304160.1| - 0.097 13.1 1.4 0.82 10.1 1.4 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|73668145|ref|YP_304160.1| - 0.18 12.3 10.7 2.7 8.4 10.7 2.6 1 1 0 1 1 1 0 AAA domain ABC2_membrane_3 PF12698.7 gi|73668146|ref|YP_304161.1| - 3.7e-28 98.6 27.5 4.4e-28 98.4 27.5 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|73668146|ref|YP_304161.1| - 2.4e-15 56.5 10.7 2.4e-15 56.5 10.7 2.3 3 0 0 3 3 3 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 gi|73668146|ref|YP_304161.1| - 6.8e-09 35.4 14.8 1.4e-08 34.4 14.8 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|73668146|ref|YP_304161.1| - 0.00013 22.0 8.1 0.00013 22.0 8.1 2.5 3 0 0 3 3 3 1 ABC-2 family transporter protein Clc-like PF07062.12 gi|73668146|ref|YP_304161.1| - 8.9 5.7 8.5 1.7 8.1 4.2 1.9 1 1 1 2 2 2 0 Clc-like DUF1616 PF07760.11 gi|73668147|ref|YP_304162.1| - 7.4e-26 91.2 0.0 9.5e-26 90.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) FixG_C PF11614.8 gi|73668147|ref|YP_304162.1| - 0.065 13.5 0.0 0.13 12.4 0.0 1.5 1 1 0 1 1 1 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF1459 PF07312.11 gi|73668147|ref|YP_304162.1| - 0.13 12.5 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1459) SAM_adeno_trans PF01887.16 gi|73668148|ref|YP_304163.1| - 3.1e-81 272.3 0.0 3.5e-81 272.1 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase HEAT_2 PF13646.6 gi|73668149|ref|YP_304164.1| - 6.3e-78 257.2 23.7 2.9e-20 72.5 1.4 4.9 1 1 4 5 5 5 5 HEAT repeats HEAT PF02985.22 gi|73668149|ref|YP_304164.1| - 7.5e-46 150.2 4.9 8.4e-05 22.5 0.0 9.6 9 0 0 9 9 9 9 HEAT repeat HEAT_PBS PF03130.16 gi|73668149|ref|YP_304164.1| - 4.9e-34 113.5 32.5 2.4e-05 24.6 0.1 9.8 10 0 0 10 10 10 8 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 gi|73668149|ref|YP_304164.1| - 8.7e-30 102.8 12.6 0.043 14.3 0.0 10.0 9 1 1 10 10 10 7 HEAT-like repeat Cnd1 PF12717.7 gi|73668149|ref|YP_304164.1| - 1.8e-15 57.4 4.4 0.0027 17.8 0.0 7.1 3 2 5 8 8 7 5 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 gi|73668149|ref|YP_304164.1| - 1.9e-11 43.6 3.9 0.62 10.2 0.0 8.1 6 2 2 8 8 8 2 Armadillo/beta-catenin-like repeat Vac14_Fab1_bd PF12755.7 gi|73668149|ref|YP_304164.1| - 3.7e-09 37.1 0.0 5 7.8 0.0 7.5 2 2 6 9 9 9 1 Vacuolar 14 Fab1-binding region DNA_alkylation PF08713.11 gi|73668149|ref|YP_304164.1| - 2.5e-08 33.9 0.1 0.0046 16.7 0.1 2.7 2 1 0 2 2 2 2 DNA alkylation repair enzyme Adaptin_N PF01602.20 gi|73668149|ref|YP_304164.1| - 9e-08 31.1 1.5 0.0019 16.9 0.0 4.1 3 2 2 5 5 5 2 Adaptin N terminal region ERAP1_C PF11838.8 gi|73668149|ref|YP_304164.1| - 2.3e-06 27.4 1.5 0.61 9.6 0.2 3.5 1 1 0 2 2 2 1 ERAP1-like C-terminal domain RasGEF_N_2 PF14663.6 gi|73668149|ref|YP_304164.1| - 6.8e-05 23.2 0.2 23 5.5 0.0 5.9 4 2 2 6 6 6 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Aconitase_B_N PF11791.8 gi|73668149|ref|YP_304164.1| - 0.00012 22.2 0.1 17 5.5 0.0 4.8 2 1 4 6 6 6 0 Aconitate B N-terminal domain CLASP_N PF12348.8 gi|73668149|ref|YP_304164.1| - 0.00027 20.6 1.4 11 5.4 0.0 4.9 4 2 1 5 5 5 0 CLASP N terminal DUF2019 PF09450.10 gi|73668149|ref|YP_304164.1| - 0.00028 20.8 1.7 0.43 10.5 0.1 4.3 3 1 1 4 4 4 1 Domain of unknown function (DUF2019) Cnd3 PF12719.7 gi|73668149|ref|YP_304164.1| - 0.0013 17.9 0.4 4.3 6.4 0.0 4.1 4 1 0 4 4 4 1 Nuclear condensing complex subunits, C-term domain Vitellogenin_N PF01347.22 gi|73668149|ref|YP_304164.1| - 0.017 13.5 0.0 0.42 8.9 0.0 2.6 1 1 2 3 3 3 0 Lipoprotein amino terminal region XPC-binding PF09280.11 gi|73668149|ref|YP_304164.1| - 0.058 13.1 0.0 1.7 8.4 0.0 3.1 3 0 0 3 3 3 0 XPC-binding domain MASE3 PF17159.4 gi|73668149|ref|YP_304164.1| - 0.062 12.9 8.9 0.13 11.9 8.9 1.4 1 1 0 1 1 1 0 Membrane-associated sensor domain RICTOR_V PF14668.6 gi|73668149|ref|YP_304164.1| - 0.13 12.5 0.9 7.5 6.9 0.0 4.0 4 0 0 4 4 4 0 Rapamycin-insensitive companion of mTOR, domain 5 DUF996 PF06195.13 gi|73668149|ref|YP_304164.1| - 0.42 10.9 11.6 0.052 13.8 4.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF996) ALF PF03752.13 gi|73668149|ref|YP_304164.1| - 2.9 8.0 8.7 1.4 9.0 0.1 4.0 4 0 0 4 4 4 0 Short repeats of unknown function YHS PF04945.13 gi|73668150|ref|YP_304165.1| - 5.2e-18 64.9 2.4 6.7e-18 64.5 2.4 1.1 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.14 gi|73668150|ref|YP_304165.1| - 0.00071 19.5 1.7 0.00095 19.1 1.7 1.3 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif FAP206 PF12018.8 gi|73668150|ref|YP_304165.1| - 0.011 15.3 0.3 0.012 15.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function Arc_trans_TRASH PF08394.10 gi|73668150|ref|YP_304165.1| - 0.031 14.6 1.5 0.046 14.1 1.5 1.3 1 0 0 1 1 1 0 Archaeal TRASH domain KAP_NTPase PF07693.14 gi|73668151|ref|YP_304166.1| - 1.8e-12 47.2 0.2 2e-12 47.0 0.2 1.0 1 0 0 1 1 1 1 KAP family P-loop domain NB-ARC PF00931.22 gi|73668151|ref|YP_304166.1| - 0.0095 15.1 0.0 0.014 14.6 0.0 1.4 1 1 0 1 1 1 1 NB-ARC domain dNK PF01712.19 gi|73668151|ref|YP_304166.1| - 0.012 15.5 0.5 0.022 14.6 0.0 1.7 2 0 0 2 2 2 0 Deoxynucleoside kinase RNA_helicase PF00910.22 gi|73668151|ref|YP_304166.1| - 0.012 16.0 0.1 0.17 12.3 0.1 2.2 2 0 0 2 2 2 0 RNA helicase NACHT PF05729.12 gi|73668151|ref|YP_304166.1| - 0.03 14.2 0.0 0.054 13.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Zeta_toxin PF06414.12 gi|73668151|ref|YP_304166.1| - 0.037 13.3 0.0 0.057 12.7 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin Torsin PF06309.11 gi|73668151|ref|YP_304166.1| - 0.11 12.7 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Torsin PRK PF00485.18 gi|73668151|ref|YP_304166.1| - 0.22 11.3 0.0 0.33 10.7 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family FGE-sulfatase PF03781.16 gi|73668152|ref|YP_304167.1| - 1.1e-47 162.8 3.9 5.9e-47 160.4 3.9 2.0 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 KAP_NTPase PF07693.14 gi|73668152|ref|YP_304167.1| - 4.7e-19 68.8 0.3 7.2e-19 68.2 0.3 1.2 1 0 0 1 1 1 1 KAP family P-loop domain Radical_SAM PF04055.21 gi|73668153|ref|YP_304168.1| - 6.4e-17 62.4 0.1 1.2e-16 61.5 0.1 1.5 1 0 0 1 1 1 1 Radical SAM superfamily DUF3463 PF11946.8 gi|73668153|ref|YP_304168.1| - 8.1e-07 28.9 0.3 1.7e-06 27.9 0.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3463) SPASM PF13186.6 gi|73668153|ref|YP_304168.1| - 0.017 15.6 3.1 0.03 14.8 1.1 2.5 2 0 0 2 2 2 0 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|73668153|ref|YP_304168.1| - 0.061 13.6 0.2 0.2 11.9 0.0 2.0 2 1 0 2 2 2 0 4Fe-4S single cluster domain HlyIII PF03006.20 gi|73668155|ref|YP_304170.1| - 0.06 13.0 17.4 0.066 12.9 3.8 2.1 2 0 0 2 2 2 0 Haemolysin-III related Sensor_TM1 PF13755.6 gi|73668155|ref|YP_304170.1| - 3.5 7.4 7.9 0.92 9.3 0.7 2.9 3 0 0 3 3 3 0 Sensor N-terminal transmembrane domain Ribosomal_60s PF00428.19 gi|73668157|ref|YP_304172.1| - 1.3e-20 73.7 20.0 1.9e-20 73.3 20.0 1.2 1 0 0 1 1 1 1 60s Acidic ribosomal protein TetR_C_31 PF17940.1 gi|73668157|ref|YP_304172.1| - 0.0026 17.9 2.5 0.0038 17.4 2.5 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain CAP_N PF01213.19 gi|73668157|ref|YP_304172.1| - 0.076 12.5 0.4 0.082 12.4 0.4 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Ribosomal_L10 PF00466.20 gi|73668158|ref|YP_304173.1| - 1.7e-22 79.4 0.3 5.4e-22 77.8 0.3 1.8 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|73668158|ref|YP_304173.1| - 1.5e-19 69.7 0.2 2.7e-19 68.9 0.2 1.4 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|73668158|ref|YP_304173.1| - 0.00064 20.3 26.2 0.00064 20.3 26.2 2.9 2 1 0 2 2 2 1 60s Acidic ribosomal protein BUD22 PF09073.10 gi|73668158|ref|YP_304173.1| - 0.012 15.0 2.1 0.012 15.0 2.1 1.6 2 0 0 2 2 2 0 BUD22 Cytomega_UL84 PF06284.11 gi|73668158|ref|YP_304173.1| - 0.26 9.7 4.1 0.41 9.0 4.1 1.2 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein WRNPLPNID PF15017.6 gi|73668158|ref|YP_304173.1| - 0.3 12.0 6.1 0.72 10.8 6.1 1.6 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box RNA_pol_3_Rpc31 PF11705.8 gi|73668158|ref|YP_304173.1| - 0.34 11.1 6.5 0.65 10.2 6.5 1.4 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DUF2780 PF11075.8 gi|73668158|ref|YP_304173.1| - 1.2 9.3 0.0 1.2 9.3 0.0 2.8 2 1 1 3 3 3 0 Protein of unknown function VcgC/VcgE (DUF2780) DUF3824 PF12868.7 gi|73668158|ref|YP_304173.1| - 3.1 8.4 4.5 6.9 7.3 4.5 1.5 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) NOA36 PF06524.12 gi|73668158|ref|YP_304173.1| - 4.9 6.4 5.8 7.3 5.8 5.8 1.2 1 0 0 1 1 1 0 NOA36 protein AIM3 PF17096.5 gi|73668158|ref|YP_304173.1| - 6.4 7.8 6.4 38 5.3 0.1 3.1 3 0 0 3 3 3 0 Altered inheritance of mitochondria protein 3 Ribosomal_L1 PF00687.21 gi|73668159|ref|YP_304174.1| - 8.9e-43 146.4 0.0 1.1e-42 146.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L11_N PF03946.14 gi|73668160|ref|YP_304175.1| - 8.6e-25 86.4 3.5 1.2e-24 85.9 1.0 2.1 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|73668160|ref|YP_304175.1| - 2.1e-23 82.6 1.1 2.1e-23 82.6 1.1 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain Spt5-NGN PF03439.13 gi|73668161|ref|YP_304176.1| - 4.1e-24 84.3 0.1 6e-24 83.8 0.1 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|73668161|ref|YP_304176.1| - 1e-06 28.5 1.1 8e-06 25.6 0.3 2.3 2 0 0 2 2 2 1 KOW motif Motile_Sperm PF00635.26 gi|73668161|ref|YP_304176.1| - 0.08 12.8 0.0 0.17 11.8 0.0 1.7 2 0 0 2 2 2 0 MSP (Major sperm protein) domain MRFAP1 PF15155.6 gi|73668161|ref|YP_304176.1| - 0.094 13.2 0.0 0.17 12.5 0.0 1.4 1 1 0 1 1 1 0 MORF4 family-associated protein1 SecE PF00584.20 gi|73668162|ref|YP_304177.1| - 1.7e-06 27.9 0.3 1.8e-06 27.8 0.3 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Tubulin PF00091.25 gi|73668163|ref|YP_304178.1| - 4e-41 141.4 0.6 6.3e-41 140.7 0.6 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|73668163|ref|YP_304178.1| - 8.4e-35 119.0 1.3 2.5e-34 117.5 1.3 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain NAD_binding_10 PF13460.6 gi|73668163|ref|YP_304178.1| - 0.02 14.8 0.9 0.09 12.7 0.2 2.2 2 0 0 2 2 2 0 NAD(P)H-binding DUF99 PF01949.16 gi|73668164|ref|YP_304179.1| - 1.9e-66 223.0 0.1 2.1e-66 222.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 AAA PF00004.29 gi|73668165|ref|YP_304180.1| - 6.6e-44 149.5 0.1 2.2e-43 147.9 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|73668165|ref|YP_304180.1| - 5.4e-16 58.1 0.6 1.4e-15 56.8 0.6 1.7 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 gi|73668165|ref|YP_304180.1| - 1.1e-10 41.3 0.0 2.6e-10 40.1 0.0 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 gi|73668165|ref|YP_304180.1| - 3.1e-08 33.7 0.8 1.1e-07 31.9 0.2 2.3 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|73668165|ref|YP_304180.1| - 1.2e-06 29.0 0.3 0.00051 20.5 0.0 2.9 2 1 1 3 3 3 1 AAA ATPase domain DUF815 PF05673.13 gi|73668165|ref|YP_304180.1| - 3.6e-06 26.3 0.0 7.3e-06 25.3 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_2 PF07724.14 gi|73668165|ref|YP_304180.1| - 9e-06 25.9 0.4 2.4e-05 24.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) Prot_ATP_OB_N PF17758.1 gi|73668165|ref|YP_304180.1| - 6.9e-05 22.4 0.0 0.00018 21.1 0.0 1.7 1 0 0 1 1 1 1 Proteasomal ATPase OB N-terminal domain AAA_18 PF13238.6 gi|73668165|ref|YP_304180.1| - 8.4e-05 23.1 0.5 0.0036 17.8 0.0 2.8 3 0 0 3 3 3 1 AAA domain RuvB_N PF05496.12 gi|73668165|ref|YP_304180.1| - 0.0005 19.9 0.0 0.0014 18.4 0.0 1.8 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain Filament PF00038.21 gi|73668165|ref|YP_304180.1| - 0.0012 18.5 1.4 0.0012 18.5 1.4 1.7 2 0 0 2 2 2 1 Intermediate filament protein AAA_22 PF13401.6 gi|73668165|ref|YP_304180.1| - 0.0015 18.8 3.4 0.054 13.8 0.1 2.6 2 1 1 3 3 2 1 AAA domain AAA_28 PF13521.6 gi|73668165|ref|YP_304180.1| - 0.0026 18.0 0.0 0.0056 16.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain APG6_N PF17675.1 gi|73668165|ref|YP_304180.1| - 0.0042 17.6 1.9 0.0042 17.6 1.9 2.1 3 0 0 3 3 1 1 Apg6 coiled-coil region ATPase PF06745.13 gi|73668165|ref|YP_304180.1| - 0.0049 16.2 3.6 0.2 11.0 0.0 3.1 2 1 1 3 3 3 1 KaiC AAA_33 PF13671.6 gi|73668165|ref|YP_304180.1| - 0.0055 16.9 0.1 0.012 15.8 0.1 1.7 1 1 0 1 1 1 1 AAA domain Rab5-bind PF09311.11 gi|73668165|ref|YP_304180.1| - 0.0059 16.1 2.0 0.012 15.0 2.0 1.5 1 0 0 1 1 1 1 Rabaptin-like protein AAA_3 PF07726.11 gi|73668165|ref|YP_304180.1| - 0.0064 16.4 0.0 0.013 15.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Cluap1 PF10234.9 gi|73668165|ref|YP_304180.1| - 0.0097 15.3 0.7 0.018 14.5 0.7 1.4 1 0 0 1 1 1 1 Clusterin-associated protein-1 AAA_14 PF13173.6 gi|73668165|ref|YP_304180.1| - 0.01 15.8 0.0 0.035 14.2 0.0 1.9 1 0 0 1 1 1 0 AAA domain Phage_GP20 PF06810.11 gi|73668165|ref|YP_304180.1| - 0.015 15.1 2.4 0.63 9.8 0.0 2.4 2 0 0 2 2 2 0 Phage minor structural protein GP20 TIP49 PF06068.13 gi|73668165|ref|YP_304180.1| - 0.021 14.0 0.0 0.039 13.2 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain Sigma54_activat PF00158.26 gi|73668165|ref|YP_304180.1| - 0.024 14.4 0.1 0.49 10.1 0.0 2.5 2 1 0 2 2 2 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|73668165|ref|YP_304180.1| - 0.026 14.3 0.1 0.11 12.2 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_17 PF13207.6 gi|73668165|ref|YP_304180.1| - 0.033 14.6 1.1 0.15 12.4 0.1 2.6 2 1 0 2 2 2 0 AAA domain Spc7 PF08317.11 gi|73668165|ref|YP_304180.1| - 0.046 12.6 4.3 0.045 12.6 1.4 2.3 3 0 0 3 3 3 0 Spc7 kinetochore protein ATPase_2 PF01637.18 gi|73668165|ref|YP_304180.1| - 0.061 13.2 2.0 10 5.9 0.0 2.9 2 1 0 3 3 3 0 ATPase domain predominantly from Archaea Mg_chelatase PF01078.21 gi|73668165|ref|YP_304180.1| - 0.068 12.6 0.0 0.2 11.0 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF724 PF05266.14 gi|73668165|ref|YP_304180.1| - 0.07 13.0 1.5 0.18 11.6 1.5 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF724) SPATA24 PF15175.6 gi|73668165|ref|YP_304180.1| - 0.11 12.4 3.9 0.061 13.2 1.0 1.9 2 0 0 2 2 2 0 Spermatogenesis-associated protein 24 ABC_tran PF00005.27 gi|73668165|ref|YP_304180.1| - 0.11 13.0 1.2 6.4 7.3 0.0 2.8 3 1 0 3 3 2 0 ABC transporter Tektin PF03148.14 gi|73668165|ref|YP_304180.1| - 0.15 10.8 8.2 0.063 12.0 3.8 2.1 2 0 0 2 2 2 0 Tektin family RNA_helicase PF00910.22 gi|73668165|ref|YP_304180.1| - 0.16 12.4 0.0 0.53 10.7 0.0 1.9 2 0 0 2 2 1 0 RNA helicase AAA_13 PF13166.6 gi|73668165|ref|YP_304180.1| - 0.28 9.8 3.4 1.3 7.6 0.6 2.3 3 0 0 3 3 3 0 AAA domain DUF3450 PF11932.8 gi|73668165|ref|YP_304180.1| - 0.31 10.3 3.8 0.83 8.9 3.8 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) BLOC1_2 PF10046.9 gi|73668165|ref|YP_304180.1| - 0.8 10.1 5.7 19 5.7 0.1 3.3 3 1 0 3 3 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF5082 PF16888.5 gi|73668165|ref|YP_304180.1| - 0.86 9.9 5.5 6.1 7.1 2.5 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) DUF3552 PF12072.8 gi|73668165|ref|YP_304180.1| - 0.92 8.9 6.2 3.6 7.0 6.5 1.8 2 0 0 2 2 1 0 Domain of unknown function (DUF3552) TMF_TATA_bd PF12325.8 gi|73668165|ref|YP_304180.1| - 1.4 9.2 8.7 1.4 9.1 4.0 2.6 3 0 0 3 3 2 0 TATA element modulatory factor 1 TATA binding Tropomyosin_1 PF12718.7 gi|73668165|ref|YP_304180.1| - 3.4 7.8 9.6 0.46 10.6 3.2 2.6 3 0 0 3 3 3 0 Tropomyosin like TSC22 PF01166.18 gi|73668165|ref|YP_304180.1| - 6.4 7.2 6.5 11 6.4 0.6 3.0 3 1 0 3 3 2 0 TSC-22/dip/bun family bZIP_2 PF07716.15 gi|73668165|ref|YP_304180.1| - 9.7 6.4 12.1 1.1 9.4 0.9 3.0 2 1 1 3 3 2 0 Basic region leucine zipper HTH_3 PF01381.22 gi|73668166|ref|YP_304181.1| - 2.5e-09 37.0 0.6 3.8e-09 36.5 0.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|73668166|ref|YP_304181.1| - 6.6e-07 29.3 1.2 1.2e-06 28.4 0.6 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|73668166|ref|YP_304181.1| - 8.1e-06 26.1 0.0 1.2e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|73668166|ref|YP_304181.1| - 0.00027 20.7 0.2 0.00045 20.0 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Flp_C PF05202.12 gi|73668166|ref|YP_304181.1| - 0.053 13.1 0.0 0.074 12.6 0.0 1.2 1 0 0 1 1 1 0 Recombinase Flp protein POTRA_1 PF08478.10 gi|73668166|ref|YP_304181.1| - 0.085 13.2 0.9 0.19 12.0 0.9 1.8 1 1 0 1 1 1 0 POTRA domain, FtsQ-type TatD_DNase PF01026.21 gi|73668167|ref|YP_304182.1| - 3.1e-24 85.7 0.0 4.5e-24 85.2 0.0 1.2 1 0 0 1 1 1 1 TatD related DNase Iso_dh PF00180.20 gi|73668168|ref|YP_304183.1| - 8.4e-83 278.4 0.0 1e-82 278.1 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase HMGL-like PF00682.19 gi|73668169|ref|YP_304184.1| - 1.1e-34 120.2 0.0 1.4e-34 119.8 0.0 1.1 1 0 0 1 1 1 1 HMGL-like Methyltransf_31 PF13847.6 gi|73668170|ref|YP_304185.1| - 1.4e-09 37.9 0.1 1.7e-09 37.7 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|73668170|ref|YP_304185.1| - 3.8e-09 36.6 0.1 5.3e-09 36.2 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73668170|ref|YP_304185.1| - 3e-08 33.4 0.1 4.6e-08 32.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|73668170|ref|YP_304185.1| - 3.4e-08 34.1 0.1 1.1e-07 32.4 0.0 1.7 1 1 1 2 2 2 1 Methyltransferase domain PrmA PF06325.13 gi|73668170|ref|YP_304185.1| - 4.7e-07 29.5 0.1 7.8e-07 28.8 0.1 1.3 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_12 PF08242.12 gi|73668170|ref|YP_304185.1| - 5.2e-06 27.1 0.1 8e-06 26.5 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|73668170|ref|YP_304185.1| - 1.1e-05 25.0 0.0 1.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase UPF0020 PF01170.18 gi|73668170|ref|YP_304185.1| - 2.5e-05 24.1 0.1 3.7e-05 23.5 0.1 1.4 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 gi|73668170|ref|YP_304185.1| - 9.2e-05 23.0 0.0 0.00017 22.1 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668170|ref|YP_304185.1| - 0.00016 21.1 0.3 0.0002 20.8 0.3 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|73668170|ref|YP_304185.1| - 0.00032 20.5 0.2 0.0013 18.6 0.0 1.7 1 1 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Cons_hypoth95 PF03602.15 gi|73668170|ref|YP_304185.1| - 0.00037 20.2 0.2 0.00051 19.7 0.2 1.3 1 1 0 1 1 1 1 Conserved hypothetical protein 95 CMAS PF02353.20 gi|73668170|ref|YP_304185.1| - 0.00042 19.7 0.0 0.00054 19.3 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase GCD14 PF08704.10 gi|73668170|ref|YP_304185.1| - 0.00049 19.8 0.0 0.00063 19.5 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit DOT1 PF08123.13 gi|73668170|ref|YP_304185.1| - 0.0014 18.2 0.0 0.0024 17.4 0.0 1.4 1 0 0 1 1 1 1 Histone methylation protein DOT1 Met_10 PF02475.16 gi|73668170|ref|YP_304185.1| - 0.0026 17.5 0.3 0.011 15.5 0.2 1.8 1 1 0 1 1 1 1 Met-10+ like-protein GidB PF02527.15 gi|73668170|ref|YP_304185.1| - 0.0033 16.8 0.1 0.0042 16.4 0.1 1.1 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltr_RsmB-F PF01189.17 gi|73668170|ref|YP_304185.1| - 0.0049 16.5 0.1 0.012 15.3 0.0 1.5 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltransf_23 PF13489.6 gi|73668170|ref|YP_304185.1| - 0.018 14.9 0.0 0.019 14.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_15 PF09445.10 gi|73668170|ref|YP_304185.1| - 0.027 14.1 0.1 0.042 13.4 0.1 1.3 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase FtsJ PF01728.19 gi|73668170|ref|YP_304185.1| - 0.029 14.5 0.0 0.038 14.1 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase N6_Mtase PF02384.16 gi|73668170|ref|YP_304185.1| - 0.051 12.8 0.2 0.12 11.6 0.0 1.5 2 0 0 2 2 2 0 N-6 DNA Methylase Methyltransf_32 PF13679.6 gi|73668170|ref|YP_304185.1| - 0.071 13.1 0.0 0.16 12.0 0.0 1.3 1 1 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 gi|73668170|ref|YP_304185.1| - 0.11 11.6 0.0 1.1 8.2 0.0 1.9 1 1 1 2 2 2 0 Ribosomal RNA adenine dimethylase TP_methylase PF00590.20 gi|73668171|ref|YP_304186.1| - 3.4e-34 118.7 0.0 4e-34 118.4 0.0 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Sipho_Gp37 PF14594.6 gi|73668171|ref|YP_304186.1| - 0.086 11.8 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Siphovirus ReqiPepy6 Gp37-like protein TP_methylase PF00590.20 gi|73668172|ref|YP_304187.1| - 2e-46 158.6 0.3 2.3e-46 158.4 0.3 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|73668172|ref|YP_304187.1| - 0.0011 19.4 0.1 0.0024 18.3 0.1 1.6 1 1 0 1 1 1 1 Radical SAM superfamily DUF4903 PF16246.5 gi|73668172|ref|YP_304187.1| - 0.11 12.1 0.1 0.7 9.5 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4903) TP_methylase PF00590.20 gi|73668173|ref|YP_304188.1| - 3.1e-35 122.1 0.7 3.7e-35 121.8 0.7 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF4127 PF13552.6 gi|73668173|ref|YP_304188.1| - 0.06 11.9 0.0 0.092 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4127) CbiC PF02570.15 gi|73668174|ref|YP_304189.1| - 2e-61 207.1 1.0 2.5e-61 206.8 1.0 1.1 1 0 0 1 1 1 1 Precorrin-8X methylmutase PglD_N PF17836.1 gi|73668174|ref|YP_304189.1| - 0.08 13.6 0.0 0.22 12.2 0.0 1.7 1 0 0 1 1 1 0 PglD N-terminal domain Y1_Tnp PF01797.16 gi|73668175|ref|YP_304190.1| - 2.2e-34 118.2 2.1 3e-34 117.7 2.1 1.2 1 0 0 1 1 1 1 Transposase IS200 like Peptidase_M44 PF03410.13 gi|73668175|ref|YP_304190.1| - 0.016 13.8 0.0 0.019 13.6 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox DsbD PF02683.15 gi|73668176|ref|YP_304191.1| - 2.4e-34 119.1 24.7 6.8e-34 117.6 24.7 1.6 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|73668176|ref|YP_304191.1| - 9.2e-14 51.8 18.4 1.5e-13 51.1 18.4 1.3 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region MerE PF05052.12 gi|73668176|ref|YP_304191.1| - 0.0028 17.5 7.7 0.099 12.6 0.8 2.8 2 1 0 2 2 2 2 MerE protein VIT1 PF01988.19 gi|73668176|ref|YP_304191.1| - 3.7 7.4 13.8 0.21 11.4 6.3 2.0 2 0 0 2 2 2 0 VIT family Thioredoxin PF00085.20 gi|73668177|ref|YP_304192.1| - 6.7e-15 54.9 0.0 1.2e-14 54.1 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.6 gi|73668177|ref|YP_304192.1| - 6e-05 23.0 0.3 0.0066 16.5 0.0 2.5 2 0 0 2 2 2 1 Thioredoxin domain DUF4972 PF16342.5 gi|73668177|ref|YP_304192.1| - 0.0015 18.2 0.1 0.0025 17.5 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4972) Thioredoxin_7 PF13899.6 gi|73668177|ref|YP_304192.1| - 0.0077 16.4 0.0 0.022 14.9 0.0 1.7 2 0 0 2 2 2 1 Thioredoxin-like DUF836 PF05768.14 gi|73668177|ref|YP_304192.1| - 0.0077 16.6 0.0 0.02 15.3 0.0 1.8 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) DIM1 PF02966.16 gi|73668177|ref|YP_304192.1| - 0.01 15.6 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 Mitosis protein DIM1 Thioredoxin_8 PF13905.6 gi|73668177|ref|YP_304192.1| - 0.078 13.3 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|73668177|ref|YP_304192.1| - 0.093 13.2 0.1 0.29 11.6 0.0 1.9 2 1 0 2 2 2 0 Thioredoxin-like domain SR-25 PF10500.9 gi|73668177|ref|YP_304192.1| - 0.11 12.1 0.3 5.6 6.5 0.1 2.1 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein Ribosomal_L21e PF01157.18 gi|73668177|ref|YP_304192.1| - 0.14 12.0 0.1 0.24 11.3 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L21e ParA PF10609.9 gi|73668178|ref|YP_304193.1| - 1.4e-93 312.9 0.1 1.7e-93 312.6 0.1 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|73668178|ref|YP_304193.1| - 1.6e-15 57.3 0.0 5.4e-15 55.6 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|73668178|ref|YP_304193.1| - 2e-09 37.6 0.9 3.1e-08 33.8 0.2 2.2 1 1 0 2 2 2 1 AAA domain Fer4_NifH PF00142.18 gi|73668178|ref|YP_304193.1| - 8.1e-07 28.7 0.1 1.9e-05 24.2 0.1 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|73668178|ref|YP_304193.1| - 1.3e-06 27.9 0.0 2.3e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.11 gi|73668178|ref|YP_304193.1| - 1.1e-05 24.8 0.0 2e-05 24.0 0.0 1.5 1 1 0 1 1 1 1 ATPase MipZ AAA_25 PF13481.6 gi|73668178|ref|YP_304193.1| - 0.0001 21.9 0.0 0.00018 21.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain CLP1_P PF16575.5 gi|73668178|ref|YP_304193.1| - 0.0008 19.3 0.0 0.0012 18.7 0.0 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop SRP54 PF00448.22 gi|73668178|ref|YP_304193.1| - 0.0024 17.5 0.2 0.0047 16.6 0.2 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|73668178|ref|YP_304193.1| - 0.0033 16.5 0.1 0.0065 15.5 0.1 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_26 PF13500.6 gi|73668178|ref|YP_304193.1| - 0.0036 17.2 0.4 0.22 11.3 0.2 2.3 2 1 0 2 2 2 1 AAA domain CBP_BcsQ PF06564.12 gi|73668178|ref|YP_304193.1| - 0.0045 16.5 0.0 0.12 11.8 0.0 2.1 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ APS_kinase PF01583.20 gi|73668178|ref|YP_304193.1| - 0.01 15.7 0.1 0.018 14.9 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase RsgA_GTPase PF03193.16 gi|73668178|ref|YP_304193.1| - 0.015 15.2 0.6 0.03 14.2 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase NB-ARC PF00931.22 gi|73668178|ref|YP_304193.1| - 0.028 13.6 0.6 0.057 12.6 0.2 1.6 2 0 0 2 2 2 0 NB-ARC domain RNA_helicase PF00910.22 gi|73668178|ref|YP_304193.1| - 0.039 14.3 0.1 1.3 9.4 0.1 2.2 2 0 0 2 2 2 0 RNA helicase Cytochrom_B559 PF00283.19 gi|73668178|ref|YP_304193.1| - 0.041 13.3 0.4 0.096 12.2 0.4 1.6 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits VirC1 PF07015.11 gi|73668178|ref|YP_304193.1| - 0.044 13.1 0.1 0.075 12.3 0.1 1.3 1 0 0 1 1 1 0 VirC1 protein Zeta_toxin PF06414.12 gi|73668178|ref|YP_304193.1| - 0.097 11.9 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 gi|73668178|ref|YP_304193.1| - 0.2 11.3 0.1 0.32 10.7 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|73668178|ref|YP_304193.1| - 0.25 11.5 0.1 0.36 11.0 0.1 1.3 1 0 0 1 1 1 0 AAA domain DUF134 PF02001.16 gi|73668179|ref|YP_304194.1| - 3.1e-27 95.0 0.1 3.5e-27 94.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4_2 PF08281.12 gi|73668179|ref|YP_304194.1| - 0.0013 18.4 0.1 0.0018 17.9 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|73668179|ref|YP_304194.1| - 0.0036 17.0 0.2 0.007 16.1 0.1 1.5 1 1 0 1 1 1 1 Homeodomain-like domain Sigma70_ECF PF07638.11 gi|73668179|ref|YP_304194.1| - 0.019 14.9 0.3 0.023 14.6 0.3 1.1 1 0 0 1 1 1 0 ECF sigma factor HTH_10 PF04967.12 gi|73668179|ref|YP_304194.1| - 0.046 13.5 0.0 0.35 10.7 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain DUF1847 PF08901.11 gi|73668181|ref|YP_304196.1| - 3.1e-38 130.9 0.2 3.7e-38 130.6 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1847) DUF1284 PF06935.11 gi|73668182|ref|YP_304197.1| - 1e-21 77.3 0.2 1.3e-21 76.9 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1284) Whib PF02467.16 gi|73668182|ref|YP_304197.1| - 0.0052 17.3 2.0 2.8 8.6 0.3 2.3 2 0 0 2 2 2 2 Transcription factor WhiB CCG PF02754.16 gi|73668183|ref|YP_304198.1| - 6.8e-34 115.9 2.1 1e-18 67.3 0.8 2.3 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|73668184|ref|YP_304199.1| - 8.4e-13 48.6 7.3 8.9e-13 48.5 6.4 1.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73668184|ref|YP_304199.1| - 1.2e-09 38.5 7.2 1.9e-09 37.9 7.2 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73668184|ref|YP_304199.1| - 5.8e-09 36.0 7.9 1.1e-08 35.1 7.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73668184|ref|YP_304199.1| - 4.4e-08 33.1 7.4 1.1e-07 31.9 7.4 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668184|ref|YP_304199.1| - 4.2e-07 30.4 6.9 9.4e-07 29.3 6.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73668184|ref|YP_304199.1| - 1.5e-05 25.0 3.8 2.5e-05 24.3 3.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668184|ref|YP_304199.1| - 7.5e-05 22.6 9.1 0.003 17.6 1.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|73668184|ref|YP_304199.1| - 0.00013 21.7 10.7 0.023 14.5 1.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73668184|ref|YP_304199.1| - 0.0033 17.8 7.8 0.083 13.4 2.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73668184|ref|YP_304199.1| - 0.017 16.0 12.4 0.29 12.1 12.5 2.3 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain DUF5316 PF17247.2 gi|73668184|ref|YP_304199.1| - 0.033 14.2 0.0 0.056 13.5 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5316) Fer4_3 PF12798.7 gi|73668184|ref|YP_304199.1| - 0.2 12.7 16.2 0.21 12.6 2.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73668184|ref|YP_304199.1| - 1.4 9.2 8.1 1.4 9.1 0.4 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73668184|ref|YP_304199.1| - 3.9 7.7 12.2 2.7 8.2 2.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|73668184|ref|YP_304199.1| - 8.8 7.3 12.6 6.5 7.7 3.5 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain ABC_tran PF00005.27 gi|73668185|ref|YP_304200.1| - 3.3e-31 108.6 0.1 4.4e-31 108.2 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668185|ref|YP_304200.1| - 3.9e-05 23.6 5.3 0.068 13.0 0.1 2.4 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system G-alpha PF00503.20 gi|73668185|ref|YP_304200.1| - 0.0004 19.7 0.3 0.00044 19.5 0.3 1.1 1 0 0 1 1 1 1 G-protein alpha subunit ATP-synt_ab PF00006.25 gi|73668185|ref|YP_304200.1| - 0.033 13.8 0.0 0.04 13.6 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_13 PF13166.6 gi|73668185|ref|YP_304200.1| - 0.037 12.7 0.2 0.74 8.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|73668185|ref|YP_304200.1| - 0.065 13.1 0.6 0.19 11.6 0.3 1.8 1 1 1 2 2 2 0 RsgA GTPase AAA_29 PF13555.6 gi|73668185|ref|YP_304200.1| - 0.11 12.3 0.5 0.19 11.5 0.5 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|73668185|ref|YP_304200.1| - 0.13 12.0 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|73668185|ref|YP_304200.1| - 0.86 9.9 4.4 10 6.4 4.4 2.1 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|73668185|ref|YP_304200.1| - 1.1 9.8 7.3 2.4 8.6 7.3 1.8 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|73668186|ref|YP_304201.1| - 2.4e-24 86.4 0.1 3.2e-24 86.0 0.1 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|73668186|ref|YP_304201.1| - 7.3e-14 52.0 0.0 1.4e-13 51.2 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|73668186|ref|YP_304201.1| - 2.7e-05 24.1 1.2 0.0018 18.2 0.0 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73668186|ref|YP_304201.1| - 6.9e-05 23.1 0.1 0.0004 20.7 0.1 1.9 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|73668186|ref|YP_304201.1| - 0.00069 19.1 2.3 0.015 14.8 2.3 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain IstB_IS21 PF01695.17 gi|73668186|ref|YP_304201.1| - 0.0082 15.9 0.0 2 8.1 0.0 2.1 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_7 PF12775.7 gi|73668186|ref|YP_304201.1| - 0.012 15.1 0.1 0.024 14.2 0.1 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_16 PF13191.6 gi|73668186|ref|YP_304201.1| - 0.019 15.4 0.0 0.031 14.6 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|73668186|ref|YP_304201.1| - 0.021 14.6 0.3 0.068 12.9 0.0 2.0 2 0 0 2 2 2 0 P-loop containing region of AAA domain DUF87 PF01935.17 gi|73668186|ref|YP_304201.1| - 0.32 11.1 2.8 0.18 11.9 0.6 1.6 2 0 0 2 2 2 0 Helicase HerA, central domain BPD_transp_1 PF00528.22 gi|73668187|ref|YP_304202.1| - 7.2e-29 100.8 11.6 7.2e-29 100.8 11.6 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|73668187|ref|YP_304202.1| - 0.0016 18.4 0.3 0.0016 18.4 0.3 3.5 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|73668188|ref|YP_304203.1| - 1.5e-43 148.7 10.6 1.5e-43 148.7 10.6 1.9 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component Glyco_transf_10 PF00852.19 gi|73668188|ref|YP_304203.1| - 0.027 14.2 0.2 0.067 12.9 0.0 1.7 2 0 0 2 2 2 0 Glycosyltransferase family 10 (fucosyltransferase) C-term SBP_bac_5 PF00496.22 gi|73668189|ref|YP_304204.1| - 3.2e-90 302.8 3.9 3.9e-90 302.5 3.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Methyltransf_11 PF08241.12 gi|73668190|ref|YP_304205.1| - 1.9e-24 86.1 0.0 3.9e-24 85.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668190|ref|YP_304205.1| - 2.4e-23 82.6 0.0 1.3e-22 80.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668190|ref|YP_304205.1| - 1.1e-18 67.5 0.0 2.3e-18 66.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73668190|ref|YP_304205.1| - 2e-17 63.5 0.0 6.4e-17 61.9 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668190|ref|YP_304205.1| - 1.1e-16 60.9 0.0 1.7e-16 60.3 0.0 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|73668190|ref|YP_304205.1| - 1.2e-14 54.8 0.0 3.9e-14 53.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain MetW PF07021.12 gi|73668190|ref|YP_304205.1| - 2e-08 34.0 0.0 2.9e-08 33.5 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.14 gi|73668190|ref|YP_304205.1| - 2.6e-06 27.1 0.0 4.9e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.14 gi|73668190|ref|YP_304205.1| - 2.8e-06 26.9 0.3 7e-06 25.6 0.0 1.8 2 0 0 2 2 2 1 Tellurite resistance protein TehB NodS PF05401.11 gi|73668190|ref|YP_304205.1| - 1.5e-05 24.8 0.0 2.1e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_32 PF13679.6 gi|73668190|ref|YP_304205.1| - 0.00032 20.7 0.0 0.00048 20.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|73668190|ref|YP_304205.1| - 0.00036 20.0 0.0 0.001 18.6 0.0 1.5 1 1 1 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 gi|73668190|ref|YP_304205.1| - 0.00044 19.6 0.0 0.00067 19.0 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase RrnaAD PF00398.20 gi|73668190|ref|YP_304205.1| - 0.002 17.3 0.0 0.003 16.7 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase TPMT PF05724.11 gi|73668190|ref|YP_304205.1| - 0.0064 16.2 0.0 0.01 15.5 0.0 1.5 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) GidB PF02527.15 gi|73668190|ref|YP_304205.1| - 0.016 14.5 0.0 0.024 13.9 0.0 1.2 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G PCMT PF01135.19 gi|73668190|ref|YP_304205.1| - 0.024 14.4 0.0 0.035 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.7 gi|73668190|ref|YP_304205.1| - 0.031 14.2 0.0 0.12 12.3 0.0 1.9 3 0 0 3 3 2 0 Methyltransferase domain N2227 PF07942.12 gi|73668190|ref|YP_304205.1| - 0.033 13.4 0.0 0.17 11.0 0.0 1.9 1 1 1 2 2 2 0 N2227-like protein AdoMet_MTase PF07757.13 gi|73668190|ref|YP_304205.1| - 0.035 14.4 0.0 0.072 13.4 0.0 1.6 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase DREV PF05219.12 gi|73668190|ref|YP_304205.1| - 0.041 13.0 0.0 0.065 12.3 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase Methyltransf_9 PF08003.11 gi|73668190|ref|YP_304205.1| - 0.1 11.5 0.0 0.29 10.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1698) Mur_ligase PF01225.25 gi|73668190|ref|YP_304205.1| - 0.11 12.8 0.0 0.24 11.7 0.0 1.5 1 0 0 1 1 1 0 Mur ligase family, catalytic domain F420_oxidored PF03807.17 gi|73668191|ref|YP_304206.1| - 3.7e-16 59.5 1.3 5e-16 59.1 0.3 1.7 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Ldh_1_N PF00056.23 gi|73668191|ref|YP_304206.1| - 0.00066 19.8 0.2 0.0011 19.1 0.2 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|73668191|ref|YP_304206.1| - 0.018 15.1 0.4 0.046 13.8 0.1 1.8 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase KR PF08659.10 gi|73668191|ref|YP_304206.1| - 0.032 14.1 1.4 0.033 14.1 0.2 1.6 2 0 0 2 2 2 0 KR domain DUF5633 PF18656.1 gi|73668191|ref|YP_304206.1| - 0.082 12.8 0.3 0.082 12.8 0.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5633) Semialdhyde_dh PF01118.24 gi|73668191|ref|YP_304206.1| - 0.19 12.2 0.6 0.57 10.6 0.1 1.9 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain DUF2284 PF10050.9 gi|73668192|ref|YP_304207.1| - 4.7e-42 143.5 0.1 5.4e-42 143.3 0.1 1.0 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) Peptidase_M24 PF00557.24 gi|73668193|ref|YP_304208.1| - 7.5e-39 133.6 0.0 1e-38 133.2 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|73668193|ref|YP_304208.1| - 2.2e-10 41.3 0.0 3.5e-10 40.7 0.0 1.3 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain DUF723 PF05265.13 gi|73668193|ref|YP_304208.1| - 0.13 12.2 0.0 0.45 10.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF723) HTH_24 PF13412.6 gi|73668194|ref|YP_304209.1| - 3.8e-23 80.8 3.8 1.9e-13 49.8 0.4 2.4 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|73668194|ref|YP_304209.1| - 1.7e-12 47.0 0.0 2.6e-05 24.0 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|73668194|ref|YP_304209.1| - 1.9e-08 34.1 0.0 0.0027 17.6 0.0 2.2 2 0 0 2 2 2 2 MarR family HTH_20 PF12840.7 gi|73668194|ref|YP_304209.1| - 3.7e-08 33.3 0.0 0.0023 17.9 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_11 PF08279.12 gi|73668194|ref|YP_304209.1| - 9.4e-08 31.9 1.1 0.00061 19.7 0.2 2.5 2 0 0 2 2 2 2 HTH domain MarR PF01047.22 gi|73668194|ref|YP_304209.1| - 1.6e-06 27.9 0.1 0.00066 19.6 0.1 2.4 2 0 0 2 2 2 1 MarR family TFIIE_alpha PF02002.17 gi|73668194|ref|YP_304209.1| - 3.4e-05 23.7 0.5 0.0056 16.5 0.1 2.3 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_AsnC-type PF13404.6 gi|73668194|ref|YP_304209.1| - 0.00023 20.9 0.0 0.0048 16.7 0.0 2.6 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain TrmB PF01978.19 gi|73668194|ref|YP_304209.1| - 0.00051 19.9 0.0 0.01 15.7 0.0 2.2 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|73668194|ref|YP_304209.1| - 0.00085 19.1 0.0 0.022 14.6 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain GerE PF00196.19 gi|73668194|ref|YP_304209.1| - 0.0014 18.1 0.3 0.63 9.6 0.1 2.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_27 PF13463.6 gi|73668194|ref|YP_304209.1| - 0.0016 18.9 0.1 0.2 12.2 0.0 2.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_Mga PF08280.11 gi|73668194|ref|YP_304209.1| - 0.0037 17.3 2.7 0.37 10.8 0.6 2.4 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain Sigma70_r4_2 PF08281.12 gi|73668194|ref|YP_304209.1| - 0.007 16.0 0.0 1.4 8.7 0.0 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_Tnp_IS630 PF01710.16 gi|73668194|ref|YP_304209.1| - 0.0077 16.3 0.2 0.43 10.6 0.0 2.2 1 1 0 2 2 2 1 Transposase Bac_DNA_binding PF00216.21 gi|73668194|ref|YP_304209.1| - 0.0089 16.2 1.1 0.2 11.9 0.1 2.2 2 0 0 2 2 2 1 Bacterial DNA-binding protein HTH_23 PF13384.6 gi|73668194|ref|YP_304209.1| - 0.012 15.3 0.0 2.3 8.1 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain HTH_34 PF13601.6 gi|73668194|ref|YP_304209.1| - 0.013 15.7 0.0 5.8 7.2 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain Mga PF05043.13 gi|73668194|ref|YP_304209.1| - 0.015 15.9 1.1 1.7 9.3 0.3 2.3 2 0 0 2 2 2 0 Mga helix-turn-helix domain HTH_29 PF13551.6 gi|73668194|ref|YP_304209.1| - 0.022 14.8 0.0 5.7 7.0 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn helix DDRGK PF09756.9 gi|73668194|ref|YP_304209.1| - 0.041 13.5 0.7 0.35 10.4 0.0 2.0 1 1 1 2 2 2 0 DDRGK domain FaeA PF04703.12 gi|73668194|ref|YP_304209.1| - 0.048 14.0 0.0 0.13 12.7 0.0 1.7 1 0 0 1 1 1 0 FaeA-like protein Ribosomal_S25 PF03297.15 gi|73668194|ref|YP_304209.1| - 0.069 13.4 0.5 6 7.1 0.1 2.2 2 0 0 2 2 2 0 S25 ribosomal protein Fe_dep_repress PF01325.19 gi|73668194|ref|YP_304209.1| - 0.071 13.3 0.0 0.43 10.8 0.0 2.0 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_10 PF04967.12 gi|73668194|ref|YP_304209.1| - 0.11 12.3 0.5 0.82 9.5 0.0 2.5 3 0 0 3 3 3 0 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|73668194|ref|YP_304209.1| - 0.13 11.8 0.0 4.7 6.8 0.0 2.5 2 0 0 2 2 2 0 Sigma-70, region 4 Peptidase_M28 PF04389.17 gi|73668196|ref|YP_304211.1| - 2.7e-32 112.1 0.0 1e-31 110.2 0.0 2.0 2 1 0 2 2 2 1 Peptidase family M28 Peptidase_M20 PF01546.28 gi|73668196|ref|YP_304211.1| - 7.7e-07 29.0 0.0 1.2e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Nicastrin PF05450.15 gi|73668196|ref|YP_304211.1| - 0.00069 19.2 0.1 0.0024 17.4 0.0 1.9 2 0 0 2 2 2 1 Nicastrin Peptidase_M42 PF05343.14 gi|73668196|ref|YP_304211.1| - 0.00077 18.6 0.1 0.0026 16.8 0.0 1.9 2 0 0 2 2 2 1 M42 glutamyl aminopeptidase DUF4910 PF16254.5 gi|73668196|ref|YP_304211.1| - 0.0077 15.1 0.0 0.017 14.0 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4910) Y_Y_Y PF07495.13 gi|73668196|ref|YP_304211.1| - 0.011 15.7 0.4 3.7 7.6 0.0 2.9 2 0 0 2 2 2 0 Y_Y_Y domain Y1_Tnp PF01797.16 gi|73668197|ref|YP_304212.1| - 1.8e-34 118.5 1.8 2.2e-34 118.1 1.8 1.1 1 0 0 1 1 1 1 Transposase IS200 like Peptidase_M44 PF03410.13 gi|73668197|ref|YP_304212.1| - 0.017 13.7 0.1 0.022 13.4 0.1 1.1 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox HTH_24 PF13412.6 gi|73668198|ref|YP_304213.1| - 9.3e-24 82.7 3.8 2e-13 49.7 0.9 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|73668198|ref|YP_304213.1| - 2.2e-13 49.8 0.4 8e-06 25.6 0.0 2.6 3 0 0 3 3 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73668198|ref|YP_304213.1| - 1.3e-08 34.8 0.0 0.0041 17.2 0.0 2.5 3 0 0 3 3 2 2 Helix-turn-helix domain MarR_2 PF12802.7 gi|73668198|ref|YP_304213.1| - 1.6e-08 34.3 0.0 0.002 18.0 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_11 PF08279.12 gi|73668198|ref|YP_304213.1| - 2.8e-08 33.6 1.5 0.00018 21.4 0.3 2.5 2 0 0 2 2 2 2 HTH domain MarR PF01047.22 gi|73668198|ref|YP_304213.1| - 1.6e-07 31.1 0.4 0.00025 20.9 0.1 2.3 2 0 0 2 2 2 2 MarR family TFIIE_alpha PF02002.17 gi|73668198|ref|YP_304213.1| - 7.1e-05 22.6 0.3 0.005 16.7 0.1 2.2 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_AsnC-type PF13404.6 gi|73668198|ref|YP_304213.1| - 0.00052 19.8 0.0 0.0046 16.8 0.0 2.4 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain TrmB PF01978.19 gi|73668198|ref|YP_304213.1| - 0.00061 19.6 0.0 0.017 15.0 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|73668198|ref|YP_304213.1| - 0.00097 18.9 0.0 0.019 14.8 0.0 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain GerE PF00196.19 gi|73668198|ref|YP_304213.1| - 0.0017 17.9 0.2 0.61 9.7 0.1 2.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_34 PF13601.6 gi|73668198|ref|YP_304213.1| - 0.0022 18.1 0.1 1.2 9.4 0.0 2.3 2 0 0 2 2 2 1 Winged helix DNA-binding domain Sigma70_r4_2 PF08281.12 gi|73668198|ref|YP_304213.1| - 0.0064 16.1 0.0 1.4 8.7 0.0 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_29 PF13551.6 gi|73668198|ref|YP_304213.1| - 0.0073 16.3 0.0 3.8 7.6 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|73668198|ref|YP_304213.1| - 0.012 15.3 0.0 1.9 8.4 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain HTH_27 PF13463.6 gi|73668198|ref|YP_304213.1| - 0.022 15.2 0.4 2.9 8.4 0.0 2.5 2 1 0 2 2 2 0 Winged helix DNA-binding domain Ribosomal_S25 PF03297.15 gi|73668198|ref|YP_304213.1| - 0.029 14.6 0.7 5 7.4 0.0 2.2 2 0 0 2 2 2 0 S25 ribosomal protein Fe_dep_repress PF01325.19 gi|73668198|ref|YP_304213.1| - 0.061 13.5 0.0 0.47 10.7 0.0 2.1 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Sigma70_r4 PF04545.16 gi|73668198|ref|YP_304213.1| - 0.087 12.4 0.0 3 7.4 0.0 2.5 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_Mga PF08280.11 gi|73668198|ref|YP_304213.1| - 0.12 12.4 5.1 0.34 11.0 0.6 2.4 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_36 PF13730.6 gi|73668198|ref|YP_304213.1| - 0.14 12.1 1.1 4.8 7.2 0.0 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain Mga PF05043.13 gi|73668198|ref|YP_304213.1| - 0.16 12.6 1.7 1.5 9.4 0.3 2.3 2 0 0 2 2 2 0 Mga helix-turn-helix domain Bac_DNA_binding PF00216.21 gi|73668198|ref|YP_304213.1| - 0.17 12.1 1.5 2.6 8.3 0.1 2.2 2 0 0 2 2 2 0 Bacterial DNA-binding protein gpUL132 PF11359.8 gi|73668198|ref|YP_304213.1| - 0.17 11.4 0.1 0.45 10.0 0.0 1.7 1 1 0 1 1 1 0 Glycoprotein UL132 DUF148 PF02520.17 gi|73668198|ref|YP_304213.1| - 0.19 11.9 3.2 0.32 11.1 3.2 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF148 HTH_10 PF04967.12 gi|73668198|ref|YP_304213.1| - 0.2 11.5 1.0 0.75 9.6 0.0 2.4 3 0 0 3 3 3 0 HTH DNA binding domain zf-H2C2 PF09337.10 gi|73668200|ref|YP_304215.1| - 0.097 12.9 0.0 4.1 7.7 0.0 2.4 2 0 0 2 2 2 0 H2C2 zinc finger DUF5518 PF17647.1 gi|73668201|ref|YP_304216.1| - 0.15 12.2 24.2 0.22 11.7 24.2 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5518) DUF2070 PF09843.9 gi|73668201|ref|YP_304216.1| - 0.46 8.7 6.2 0.56 8.4 6.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ABC2_membrane_2 PF12679.7 gi|73668202|ref|YP_304217.1| - 2.9e-12 46.5 25.7 1.6e-11 44.1 25.7 2.1 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|73668202|ref|YP_304217.1| - 6.7e-07 28.7 38.4 6.7e-07 28.7 38.4 2.0 1 1 1 2 2 2 1 ABC-2 family transporter protein DUF2921 PF11145.8 gi|73668202|ref|YP_304217.1| - 0.15 9.9 1.5 0.18 9.6 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2921) ABC2_membrane PF01061.24 gi|73668202|ref|YP_304217.1| - 0.33 10.3 42.5 0.049 13.0 32.2 2.3 1 1 1 2 2 2 0 ABC-2 type transporter ABC2_membrane_5 PF13346.6 gi|73668202|ref|YP_304217.1| - 2.8 7.5 42.0 40 3.7 41.8 2.5 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|73668203|ref|YP_304218.1| - 4.8e-27 95.1 0.1 7.1e-27 94.6 0.1 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668203|ref|YP_304218.1| - 3.4e-13 50.1 1.6 1.4e-08 35.0 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|73668203|ref|YP_304218.1| - 0.0048 17.6 1.0 0.0098 16.6 1.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) Rad17 PF03215.15 gi|73668203|ref|YP_304218.1| - 0.0081 16.1 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain Peptidase_M28 PF04389.17 gi|73668204|ref|YP_304219.1| - 2.3e-31 109.1 0.0 8.6e-31 107.2 0.0 1.9 2 1 0 2 2 2 1 Peptidase family M28 Peptidase_M20 PF01546.28 gi|73668204|ref|YP_304219.1| - 7.7e-07 29.0 0.0 1.3e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Nicastrin PF05450.15 gi|73668204|ref|YP_304219.1| - 0.00065 19.2 0.1 0.002 17.6 0.0 1.8 2 0 0 2 2 2 1 Nicastrin Peptidase_M42 PF05343.14 gi|73668204|ref|YP_304219.1| - 0.0008 18.5 0.1 0.0022 17.1 0.0 1.7 2 0 0 2 2 2 1 M42 glutamyl aminopeptidase DUF4910 PF16254.5 gi|73668204|ref|YP_304219.1| - 0.0031 16.4 0.0 0.0061 15.5 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4910) FrhB_FdhB_C PF04432.13 gi|73668206|ref|YP_304221.1| - 3.3e-33 114.7 0.1 5.4e-33 114.0 0.1 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|73668206|ref|YP_304221.1| - 3.3e-18 65.6 0.1 6e-18 64.8 0.1 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_6 PF12837.7 gi|73668206|ref|YP_304221.1| - 1.2e-08 34.7 12.0 1.6e-06 27.9 2.0 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|73668206|ref|YP_304221.1| - 7.8e-08 31.8 3.1 7.8e-08 31.8 3.1 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73668206|ref|YP_304221.1| - 1.6e-06 28.1 8.6 1.6e-06 28.1 8.6 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668206|ref|YP_304221.1| - 9e-05 23.0 10.0 9e-05 23.0 10.0 2.0 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73668206|ref|YP_304221.1| - 0.00016 21.8 20.2 0.0012 18.9 10.6 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668206|ref|YP_304221.1| - 0.00045 20.2 2.1 0.00045 20.2 2.1 3.3 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73668206|ref|YP_304221.1| - 0.0012 19.2 13.7 0.0053 17.2 0.9 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73668206|ref|YP_304221.1| - 0.0032 18.4 14.1 0.29 12.1 12.2 3.0 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|73668206|ref|YP_304221.1| - 0.0076 16.8 7.3 0.14 12.8 0.6 2.7 3 0 0 3 3 2 2 4Fe-4S dicluster domain DUF1344 PF07076.11 gi|73668206|ref|YP_304221.1| - 0.017 15.0 0.0 0.037 13.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1344) Fer4_8 PF13183.6 gi|73668206|ref|YP_304221.1| - 0.027 14.9 9.0 0.51 10.8 2.1 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73668206|ref|YP_304221.1| - 0.028 15.1 2.0 0.81 10.5 0.3 2.9 3 0 0 3 3 2 0 4Fe-4S single cluster domain Fer4_21 PF14697.6 gi|73668206|ref|YP_304221.1| - 0.041 14.0 2.1 0.041 14.0 2.1 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73668206|ref|YP_304221.1| - 0.057 13.6 3.3 1.7 8.9 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|73668206|ref|YP_304221.1| - 0.11 13.4 5.2 0.16 12.8 0.2 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73668206|ref|YP_304221.1| - 0.14 12.7 7.2 0.87 10.2 1.1 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|73668206|ref|YP_304221.1| - 1.7 9.8 24.3 0.28 12.2 6.4 3.2 4 0 0 4 4 2 0 4Fe-4S binding domain GXGXG PF01493.19 gi|73668207|ref|YP_304222.1| - 1.1e-34 119.7 8.7 1.4e-34 119.4 8.7 1.1 1 0 0 1 1 1 1 GXGXG motif Glu_synthase PF01645.17 gi|73668208|ref|YP_304223.1| - 2.7e-137 457.8 0.0 3.6e-137 457.4 0.0 1.1 1 0 0 1 1 1 1 Conserved region in glutamate synthase Glu_syn_central PF04898.14 gi|73668208|ref|YP_304223.1| - 1.4e-15 57.5 0.0 9.7e-08 31.8 0.0 2.3 2 0 0 2 2 2 2 Glutamate synthase central domain Fer4_10 PF13237.6 gi|73668208|ref|YP_304223.1| - 8.4e-10 38.6 15.1 1.8e-06 28.0 12.0 2.8 2 1 1 3 3 3 3 4Fe-4S dicluster domain IMPDH PF00478.25 gi|73668208|ref|YP_304223.1| - 2.7e-09 36.5 6.4 9e-07 28.2 6.6 2.8 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Fer4_7 PF12838.7 gi|73668208|ref|YP_304223.1| - 4.3e-09 36.8 14.9 6.5e-05 23.4 13.7 3.4 2 1 2 4 4 4 4 4Fe-4S dicluster domain FMN_dh PF01070.18 gi|73668208|ref|YP_304223.1| - 6.3e-09 35.3 6.2 2.2e-07 30.3 2.7 3.0 3 0 0 3 3 3 1 FMN-dependent dehydrogenase Fer4_6 PF12837.7 gi|73668208|ref|YP_304223.1| - 8.2e-09 35.2 21.7 3.3e-05 23.8 2.3 3.3 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73668208|ref|YP_304223.1| - 1.9e-08 34.3 15.3 1.8e-07 31.2 10.6 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73668208|ref|YP_304223.1| - 1.1e-07 31.4 23.1 4.7e-06 26.2 1.8 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73668208|ref|YP_304223.1| - 3e-07 30.5 8.4 3e-07 30.5 8.4 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668208|ref|YP_304223.1| - 3.6e-07 31.0 8.8 0.00045 21.1 0.2 3.3 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain NMO PF03060.15 gi|73668208|ref|YP_304223.1| - 8.7e-07 28.6 4.8 8.8e-06 25.3 6.3 1.9 2 1 0 2 2 2 1 Nitronate monooxygenase Fer4_17 PF13534.6 gi|73668208|ref|YP_304223.1| - 3.5e-06 27.4 7.1 0.063 13.8 0.2 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668208|ref|YP_304223.1| - 1.1e-05 25.2 20.5 0.011 15.8 1.6 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain DHO_dh PF01180.21 gi|73668208|ref|YP_304223.1| - 1.8e-05 24.1 3.3 0.00013 21.3 2.7 2.3 2 1 0 2 2 2 1 Dihydroorotate dehydrogenase Fer4_8 PF13183.6 gi|73668208|ref|YP_304223.1| - 2.6e-05 24.6 12.3 0.062 13.8 0.9 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain His_biosynth PF00977.21 gi|73668208|ref|YP_304223.1| - 0.0024 17.3 0.3 0.005 16.3 0.3 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein Fer4_15 PF13459.6 gi|73668208|ref|YP_304223.1| - 0.018 15.8 13.2 0.17 12.6 1.6 3.3 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|73668208|ref|YP_304223.1| - 0.019 15.1 4.7 0.019 15.1 4.7 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|73668208|ref|YP_304223.1| - 0.12 13.2 17.3 0.18 12.7 1.1 3.1 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73668208|ref|YP_304223.1| - 3.3 8.3 21.0 0.14 12.7 1.1 3.3 4 0 0 4 4 2 0 4Fe-4S single cluster domain of Ferredoxin I GATase_6 PF13522.6 gi|73668209|ref|YP_304224.1| - 2.4e-12 47.2 0.0 1.9e-09 37.8 0.0 2.2 2 0 0 2 2 2 2 Glutamine amidotransferase domain GATase_2 PF00310.21 gi|73668209|ref|YP_304224.1| - 3e-08 32.8 0.4 2.3e-06 26.6 0.4 2.3 1 1 0 1 1 1 1 Glutamine amidotransferases class-II GATase_7 PF13537.6 gi|73668209|ref|YP_304224.1| - 2.1e-06 27.6 0.0 0.051 13.5 0.0 2.2 2 0 0 2 2 2 2 Glutamine amidotransferase domain Gln-synt_C PF00120.24 gi|73668210|ref|YP_304225.1| - 1.1e-136 455.4 0.0 1.3e-136 455.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|73668210|ref|YP_304225.1| - 9.1e-29 99.0 0.0 2.1e-28 97.9 0.0 1.7 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 gi|73668210|ref|YP_304225.1| - 4.4e-06 26.5 0.0 2.5e-05 24.0 0.0 2.1 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain DUF4096 PF13340.6 gi|73668211|ref|YP_304226.1| - 4.9e-21 74.7 0.2 8.3e-21 74.0 0.0 1.5 2 0 0 2 2 2 1 Putative transposase of IS4/5 family (DUF4096) BTRD1 PF17660.1 gi|73668211|ref|YP_304226.1| - 0.097 12.5 0.1 0.54 10.1 0.0 2.0 2 0 0 2 2 2 0 Bacterial tandem repeat domain 1 HTH_IclR PF09339.10 gi|73668211|ref|YP_304226.1| - 0.22 11.4 0.0 0.44 10.4 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain ParE_toxin PF05016.15 gi|73668212|ref|YP_304227.1| - 3.5e-05 24.3 0.3 4.1e-05 24.1 0.3 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE Na_H_Exchanger PF00999.21 gi|73668213|ref|YP_304228.1| - 1.9e-58 198.1 60.3 2.8e-58 197.5 60.3 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|73668213|ref|YP_304228.1| - 4.3e-23 81.8 0.2 7.4e-23 81.0 0.2 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|73668213|ref|YP_304228.1| - 1.4e-13 50.4 0.2 3.5e-13 49.2 0.2 1.7 1 0 0 1 1 1 1 TrkA-C domain LAM_C PF12544.8 gi|73668214|ref|YP_304229.1| - 1.3e-36 125.6 0.0 2.1e-36 124.9 0.0 1.3 1 0 0 1 1 1 1 Lysine-2,3-aminomutase Radical_SAM PF04055.21 gi|73668214|ref|YP_304229.1| - 4.5e-10 40.1 0.8 2.2e-09 37.9 0.1 2.3 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|73668214|ref|YP_304229.1| - 0.00025 21.2 0.1 0.063 13.4 0.0 3.0 3 0 0 3 3 3 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|73668214|ref|YP_304229.1| - 0.00066 20.0 0.1 0.0023 18.2 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Acetyltransf_1 PF00583.25 gi|73668215|ref|YP_304230.1| - 3.3e-06 27.3 0.0 1.2e-05 25.5 0.0 2.0 3 0 0 3 3 3 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|73668215|ref|YP_304230.1| - 6.4e-05 23.1 0.1 0.0006 20.0 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73668215|ref|YP_304230.1| - 9.5e-05 22.3 0.0 0.00018 21.5 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73668215|ref|YP_304230.1| - 0.022 14.8 0.0 0.055 13.5 0.0 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73668215|ref|YP_304230.1| - 0.089 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein RACo_C_ter PF14574.6 gi|73668216|ref|YP_304231.1| - 2e-72 243.4 1.9 7.3e-72 241.5 2.4 1.7 2 0 0 2 2 2 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|73668216|ref|YP_304231.1| - 9.4e-09 35.2 0.0 7.2e-08 32.3 0.0 2.2 2 0 0 2 2 2 1 RACo middle region Fer4_9 PF13187.6 gi|73668216|ref|YP_304231.1| - 9.2e-06 25.7 11.2 1.7e-05 24.9 11.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668216|ref|YP_304231.1| - 3.9e-05 24.2 11.4 8.8e-05 23.0 11.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668216|ref|YP_304231.1| - 8.1e-05 23.5 13.7 0.00034 21.5 3.9 2.8 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|73668216|ref|YP_304231.1| - 0.00083 19.4 11.6 0.0017 18.4 11.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73668216|ref|YP_304231.1| - 0.001 19.0 14.6 0.022 14.8 5.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73668216|ref|YP_304231.1| - 0.002 18.2 14.2 0.0074 16.4 14.3 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|73668216|ref|YP_304231.1| - 0.0027 17.8 4.6 0.0055 16.8 4.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73668216|ref|YP_304231.1| - 0.0027 17.4 5.1 0.0027 17.4 5.1 2.7 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73668216|ref|YP_304231.1| - 0.0045 17.0 12.3 0.2 11.8 2.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73668216|ref|YP_304231.1| - 0.021 15.2 3.6 0.15 12.6 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain ELFV_dehydrog PF00208.21 gi|73668216|ref|YP_304231.1| - 0.047 13.4 0.1 0.15 11.8 0.0 1.8 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Fer4_4 PF12800.7 gi|73668216|ref|YP_304231.1| - 0.073 13.6 12.4 0.51 11.0 0.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73668216|ref|YP_304231.1| - 0.39 10.9 11.3 1.8 8.8 11.4 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73668216|ref|YP_304231.1| - 1.3 10.1 17.4 6.3 8.0 5.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Lyase_1 PF00206.20 gi|73668217|ref|YP_304232.1| - 1.5e-54 185.6 1.2 1.9e-54 185.2 1.2 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|73668217|ref|YP_304232.1| - 2.3e-19 69.7 0.3 7.4e-19 68.1 0.1 2.0 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus HSCB_C PF07743.13 gi|73668217|ref|YP_304232.1| - 0.048 14.1 0.8 10 6.7 0.1 3.1 2 1 1 3 3 3 0 HSCB C-terminal oligomerisation domain Phage_TAC_5 PF08890.11 gi|73668217|ref|YP_304232.1| - 0.14 12.2 0.1 0.87 9.6 0.0 2.1 2 0 0 2 2 2 0 Phage XkdN-like tail assembly chaperone protein, TAC Ribosomal_L40e PF01020.17 gi|73668218|ref|YP_304233.1| - 2.4e-06 27.3 6.2 2.8e-06 27.1 6.2 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DNA_RNApol_7kD PF03604.13 gi|73668218|ref|YP_304233.1| - 0.00035 20.2 4.3 0.00055 19.5 4.3 1.4 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.6 gi|73668218|ref|YP_304233.1| - 0.0019 17.9 0.6 0.0026 17.4 0.6 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|73668218|ref|YP_304233.1| - 0.0044 17.0 0.6 0.0048 16.9 0.6 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|73668218|ref|YP_304233.1| - 0.016 14.6 1.4 0.02 14.3 1.4 1.2 1 0 0 1 1 1 0 zinc-ribbon domain Ribosomal_L37e PF01907.19 gi|73668218|ref|YP_304233.1| - 0.021 15.0 3.8 0.028 14.6 3.8 1.3 1 0 0 1 1 1 0 Ribosomal protein L37e Rubredoxin_2 PF18073.1 gi|73668218|ref|YP_304233.1| - 0.071 12.8 1.5 0.32 10.7 0.2 2.0 2 0 0 2 2 2 0 Rubredoxin metal binding domain PcrB PF01884.17 gi|73668219|ref|YP_304234.1| - 1.3e-65 221.0 0.4 1.6e-65 220.8 0.4 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|73668219|ref|YP_304234.1| - 1.1e-05 25.1 0.1 2e-05 24.2 0.1 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.25 gi|73668219|ref|YP_304234.1| - 0.016 14.2 1.0 0.5 9.3 0.2 2.1 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 gi|73668219|ref|YP_304234.1| - 0.063 12.5 0.9 0.48 9.6 0.1 2.1 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Ribul_P_3_epim PF00834.19 gi|73668219|ref|YP_304234.1| - 0.067 12.6 0.2 0.15 11.4 0.2 1.5 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family ABC_tran PF00005.27 gi|73668220|ref|YP_304235.1| - 4.4e-54 182.7 0.0 3.5e-27 95.6 0.0 2.8 2 1 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 gi|73668220|ref|YP_304235.1| - 1.7e-08 34.5 0.2 0.0026 17.7 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 gi|73668220|ref|YP_304235.1| - 6.5e-08 32.2 0.5 0.0033 17.1 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|73668220|ref|YP_304235.1| - 2.1e-07 31.1 2.7 0.0044 16.9 0.1 3.9 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73668220|ref|YP_304235.1| - 2.1e-06 28.0 2.0 0.19 12.0 0.0 3.9 4 0 0 4 4 4 2 AAA domain AAA_23 PF13476.6 gi|73668220|ref|YP_304235.1| - 5.1e-06 27.1 2.5 0.0079 16.7 0.1 2.8 2 1 0 2 2 2 2 AAA domain TniB PF05621.11 gi|73668220|ref|YP_304235.1| - 7.4e-06 25.5 0.4 0.00081 18.8 0.0 3.6 4 0 0 4 4 4 1 Bacterial TniB protein AAA_16 PF13191.6 gi|73668220|ref|YP_304235.1| - 1.6e-05 25.4 0.0 0.14 12.6 0.1 2.6 2 0 0 2 2 2 2 AAA ATPase domain SbcCD_C PF13558.6 gi|73668220|ref|YP_304235.1| - 3e-05 24.2 0.3 0.45 10.8 0.0 4.6 3 2 0 3 3 3 1 Putative exonuclease SbcCD, C subunit PRK PF00485.18 gi|73668220|ref|YP_304235.1| - 3.4e-05 23.7 0.8 0.21 11.3 0.0 2.5 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_30 PF13604.6 gi|73668220|ref|YP_304235.1| - 5.3e-05 23.0 0.7 0.34 10.6 0.0 2.9 3 0 0 3 3 3 2 AAA domain NB-ARC PF00931.22 gi|73668220|ref|YP_304235.1| - 0.00019 20.7 0.1 0.4 9.8 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain SMC_N PF02463.19 gi|73668220|ref|YP_304235.1| - 0.00036 20.1 0.0 10 5.5 0.0 3.7 3 1 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|73668220|ref|YP_304235.1| - 0.00054 19.8 0.1 0.11 12.2 0.0 3.0 3 0 0 3 3 3 1 AAA ATPase domain MMR_HSR1 PF01926.23 gi|73668220|ref|YP_304235.1| - 0.0019 18.3 1.1 1.2 9.2 0.1 3.1 4 0 0 4 4 2 1 50S ribosome-binding GTPase MobB PF03205.14 gi|73668220|ref|YP_304235.1| - 0.0022 17.9 0.8 0.93 9.4 0.1 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 gi|73668220|ref|YP_304235.1| - 0.0029 17.5 0.8 2.7 7.8 0.0 3.2 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea APS_kinase PF01583.20 gi|73668220|ref|YP_304235.1| - 0.0087 16.0 0.1 2.2 8.2 0.0 2.5 2 0 0 2 2 2 1 Adenylylsulphate kinase G-alpha PF00503.20 gi|73668220|ref|YP_304235.1| - 0.0088 15.2 0.1 0.89 8.6 0.0 2.5 2 1 0 2 2 2 1 G-protein alpha subunit NTPase_1 PF03266.15 gi|73668220|ref|YP_304235.1| - 0.0088 16.0 0.4 0.68 9.8 0.2 2.5 2 0 0 2 2 2 1 NTPase PduV-EutP PF10662.9 gi|73668220|ref|YP_304235.1| - 0.01 15.6 0.1 0.89 9.3 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 gi|73668220|ref|YP_304235.1| - 0.014 15.3 3.7 2.7 7.9 0.2 3.1 3 0 0 3 3 3 0 NACHT domain AAA_24 PF13479.6 gi|73668220|ref|YP_304235.1| - 0.016 15.0 1.1 2 8.1 0.1 2.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|73668220|ref|YP_304235.1| - 0.016 14.8 0.1 23 4.5 0.1 3.6 4 0 0 4 4 4 0 AAA domain TsaE PF02367.17 gi|73668220|ref|YP_304235.1| - 0.02 14.9 0.1 1.2 9.2 0.0 2.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 gi|73668220|ref|YP_304235.1| - 0.023 14.8 2.8 1.6 8.9 0.5 2.9 3 1 0 3 3 2 0 AAA domain Zeta_toxin PF06414.12 gi|73668220|ref|YP_304235.1| - 0.025 13.9 0.4 7 5.9 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin Rad17 PF03215.15 gi|73668220|ref|YP_304235.1| - 0.032 14.2 0.0 8.7 6.2 0.0 2.6 2 0 0 2 2 2 0 Rad17 P-loop domain MeaB PF03308.16 gi|73668220|ref|YP_304235.1| - 0.032 13.2 0.2 0.26 10.2 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA PF00004.29 gi|73668220|ref|YP_304235.1| - 0.033 14.6 0.4 34 4.9 0.0 3.6 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) cobW PF02492.19 gi|73668220|ref|YP_304235.1| - 0.036 13.7 2.0 3.1 7.4 0.1 2.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 gi|73668220|ref|YP_304235.1| - 0.072 13.3 2.6 2.8 8.2 0.5 3.0 3 1 0 3 3 2 0 AAA domain PhoH PF02562.16 gi|73668220|ref|YP_304235.1| - 0.081 12.4 0.1 6.7 6.1 0.0 2.5 2 0 0 2 2 2 0 PhoH-like protein Peptidase_M99_C PF17129.4 gi|73668220|ref|YP_304235.1| - 0.083 13.1 0.1 0.24 11.6 0.1 1.7 1 0 0 1 1 1 0 C-terminal domain of metallo-carboxypeptidase Mg_chelatase PF01078.21 gi|73668220|ref|YP_304235.1| - 0.084 12.2 0.0 2.2 7.6 0.0 2.5 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|73668220|ref|YP_304235.1| - 0.085 13.3 0.3 12 6.3 0.0 2.6 2 0 0 2 2 2 0 RNA helicase DLIC PF05783.11 gi|73668220|ref|YP_304235.1| - 0.091 11.6 0.1 2.2 7.0 0.0 2.1 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) AAA_14 PF13173.6 gi|73668220|ref|YP_304235.1| - 0.11 12.5 0.8 34 4.5 0.1 3.4 3 0 0 3 3 3 0 AAA domain IstB_IS21 PF01695.17 gi|73668220|ref|YP_304235.1| - 0.14 11.9 0.0 34 4.1 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein DUF87 PF01935.17 gi|73668220|ref|YP_304235.1| - 0.17 12.0 9.0 4.8 7.2 0.8 3.4 2 1 0 3 3 3 0 Helicase HerA, central domain AAA_18 PF13238.6 gi|73668220|ref|YP_304235.1| - 0.17 12.4 3.8 4.1 7.9 0.2 3.2 2 1 0 2 2 2 0 AAA domain Roc PF08477.13 gi|73668220|ref|YP_304235.1| - 0.21 11.8 0.3 8 6.7 0.0 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_5 PF07728.14 gi|73668220|ref|YP_304235.1| - 0.26 11.3 1.8 8.9 6.3 0.3 3.2 3 1 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_17 PF13207.6 gi|73668220|ref|YP_304235.1| - 0.26 11.7 1.1 16 5.9 0.3 3.1 2 1 0 2 2 2 0 AAA domain FMN_red PF03358.15 gi|73668221|ref|YP_304236.1| - 5.3e-20 71.7 0.0 7.9e-20 71.2 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73668221|ref|YP_304236.1| - 3.5e-08 33.4 0.0 4.6e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Flavin_Reduct PF01613.18 gi|73668222|ref|YP_304237.1| - 1.3e-16 61.0 0.0 1.6e-16 60.8 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain HATPase_c PF02518.26 gi|73668223|ref|YP_304238.1| - 1.3e-28 99.7 0.3 6.8e-28 97.4 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|73668223|ref|YP_304238.1| - 5e-15 55.3 0.1 1.2e-14 54.1 0.1 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain MEDS PF14417.6 gi|73668223|ref|YP_304238.1| - 6.2e-12 45.6 0.0 1.3e-11 44.6 0.0 1.5 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HATPase_c_3 PF13589.6 gi|73668223|ref|YP_304238.1| - 0.0028 17.5 0.2 0.0092 15.8 0.0 1.9 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NPCBM_assoc PF10633.9 gi|73668224|ref|YP_304239.1| - 3.2e-06 27.3 1.2 0.77 10.1 0.0 4.2 4 1 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|73668224|ref|YP_304239.1| - 9.6e-06 25.8 6.6 0.021 15.1 0.3 4.0 2 2 0 2 2 2 2 Domain of unknown function DUF11 CARDB PF07705.11 gi|73668224|ref|YP_304239.1| - 6.9e-05 23.1 4.3 0.00095 19.4 0.3 3.5 3 1 0 3 3 3 1 CARDB TIG PF01833.24 gi|73668224|ref|YP_304239.1| - 0.057 13.5 1.3 14 5.8 0.2 3.1 3 0 0 3 3 3 0 IPT/TIG domain Gram_pos_anchor PF00746.21 gi|73668224|ref|YP_304239.1| - 0.12 12.4 0.0 0.12 12.4 0.0 2.1 2 1 1 3 3 3 0 LPXTG cell wall anchor motif DUF824 PF05688.11 gi|73668224|ref|YP_304239.1| - 4.5 7.2 8.4 1.2 9.0 0.1 4.0 5 0 0 5 5 5 0 Salmonella repeat of unknown function (DUF824) ABC_tran PF00005.27 gi|73668225|ref|YP_304240.1| - 1.1e-34 119.9 0.0 1.4e-34 119.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668225|ref|YP_304240.1| - 1.3e-06 28.4 0.3 0.037 13.8 0.3 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668225|ref|YP_304240.1| - 2.3e-05 24.0 0.0 0.0009 18.7 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73668225|ref|YP_304240.1| - 0.00018 21.1 0.0 0.00033 20.3 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|73668225|ref|YP_304240.1| - 0.0016 18.4 0.0 0.0026 17.7 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|73668225|ref|YP_304240.1| - 0.0023 18.2 0.1 0.006 16.9 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73668225|ref|YP_304240.1| - 0.0052 17.2 0.0 0.0065 16.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|73668225|ref|YP_304240.1| - 0.011 16.2 0.1 0.017 15.7 0.1 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|73668225|ref|YP_304240.1| - 0.1 12.7 0.1 0.22 11.6 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 gi|73668225|ref|YP_304240.1| - 0.11 12.1 0.0 0.42 10.3 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_24 PF13479.6 gi|73668225|ref|YP_304240.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|73668225|ref|YP_304240.1| - 0.15 11.6 0.0 0.28 10.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|73668225|ref|YP_304240.1| - 0.19 10.9 0.1 0.33 10.1 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain MacB_PCD PF12704.7 gi|73668226|ref|YP_304241.1| - 1.6e-24 87.4 0.8 3.2e-24 86.4 0.8 1.5 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|73668226|ref|YP_304241.1| - 4.6e-11 43.1 2.0 4.6e-11 43.1 2.0 3.1 3 0 0 3 3 3 2 FtsX-like permease family CARDB PF07705.11 gi|73668227|ref|YP_304242.1| - 2.5e-06 27.7 3.2 0.0002 21.6 0.2 3.4 3 1 0 3 3 3 1 CARDB DUF11 PF01345.18 gi|73668227|ref|YP_304242.1| - 3.8e-06 27.1 5.2 0.082 13.2 0.2 4.2 2 2 0 2 2 2 2 Domain of unknown function DUF11 NPCBM_assoc PF10633.9 gi|73668227|ref|YP_304242.1| - 3.1e-05 24.1 0.2 1.9 8.8 0.0 4.1 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4352 PF11611.8 gi|73668227|ref|YP_304242.1| - 0.074 13.3 1.9 9.5 6.5 0.2 2.9 2 2 0 2 2 2 0 Domain of unknown function (DUF4352) DUF824 PF05688.11 gi|73668227|ref|YP_304242.1| - 0.086 12.7 4.4 3 7.7 0.0 3.8 4 0 0 4 4 4 0 Salmonella repeat of unknown function (DUF824) ABC2_membrane PF01061.24 gi|73668228|ref|YP_304243.1| - 2.9e-22 79.1 21.5 2.9e-22 79.1 21.5 2.0 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|73668228|ref|YP_304243.1| - 6.8e-09 35.3 28.9 6.8e-09 35.3 28.9 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein N_methyl PF07963.12 gi|73668228|ref|YP_304243.1| - 0.023 14.2 0.1 0.023 14.2 0.1 3.7 4 0 0 4 4 4 0 Prokaryotic N-terminal methylation motif ABC_tran PF00005.27 gi|73668229|ref|YP_304244.1| - 2.6e-34 118.7 0.2 5.7e-34 117.6 0.1 1.6 2 0 0 2 2 2 1 ABC transporter DUF4162 PF13732.6 gi|73668229|ref|YP_304244.1| - 8.1e-12 45.7 2.5 1e-11 45.4 0.4 2.3 3 0 0 3 3 2 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|73668229|ref|YP_304244.1| - 1e-10 42.0 0.2 0.00012 22.0 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|73668229|ref|YP_304244.1| - 1.4e-05 25.0 0.9 0.036 13.8 0.2 3.0 1 1 2 3 3 3 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73668229|ref|YP_304244.1| - 8.7e-05 22.5 0.6 0.00029 20.8 0.1 2.1 2 1 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 gi|73668229|ref|YP_304244.1| - 0.00026 20.5 0.7 0.0012 18.3 0.3 2.3 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|73668229|ref|YP_304244.1| - 0.00039 21.0 5.7 0.0019 18.7 5.7 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73668229|ref|YP_304244.1| - 0.0016 18.1 0.1 0.0038 16.9 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|73668229|ref|YP_304244.1| - 0.011 16.2 0.3 0.36 11.4 0.2 2.4 1 1 1 2 2 2 0 AAA domain Rad17 PF03215.15 gi|73668229|ref|YP_304244.1| - 0.016 15.1 0.1 0.027 14.4 0.1 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_22 PF13401.6 gi|73668229|ref|YP_304244.1| - 0.023 15.0 0.6 0.12 12.7 0.4 2.3 1 1 1 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|73668229|ref|YP_304244.1| - 0.048 13.7 3.1 0.12 12.4 0.4 2.4 2 1 0 2 2 2 0 50S ribosome-binding GTPase MGS PF02142.22 gi|73668229|ref|YP_304244.1| - 0.059 13.6 0.4 0.23 11.7 0.2 2.1 2 0 0 2 2 2 0 MGS-like domain AAA_16 PF13191.6 gi|73668229|ref|YP_304244.1| - 0.062 13.7 0.0 0.44 10.9 0.0 2.1 2 1 0 2 2 2 0 AAA ATPase domain AAA_33 PF13671.6 gi|73668229|ref|YP_304244.1| - 0.13 12.5 0.2 1.7 8.8 0.2 2.5 1 1 0 1 1 1 0 AAA domain HSP20 PF00011.21 gi|73668231|ref|YP_304246.1| - 0.033 14.3 0.0 1.1 9.4 0.0 2.0 1 1 0 1 1 1 0 Hsp20/alpha crystallin family CS PF04969.16 gi|73668231|ref|YP_304246.1| - 0.082 13.9 0.0 0.097 13.7 0.0 1.2 1 0 0 1 1 1 0 CS domain PIH1_CS PF18201.1 gi|73668231|ref|YP_304246.1| - 0.1 13.0 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 PIH1 CS-like domain DUF1059 PF06348.11 gi|73668232|ref|YP_304247.1| - 5.9e-13 48.8 1.5 7.3e-13 48.5 1.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) Halogen_Hydrol PF10112.9 gi|73668232|ref|YP_304247.1| - 0.0071 16.4 0.7 0.0082 16.2 0.7 1.0 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF832 PF05734.11 gi|73668232|ref|YP_304247.1| - 0.012 15.1 0.2 0.014 14.9 0.2 1.0 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) Sina PF03145.16 gi|73668232|ref|YP_304247.1| - 0.028 14.4 0.3 0.032 14.2 0.3 1.1 1 0 0 1 1 1 0 Seven in absentia protein family Tugs PF17840.1 gi|73668232|ref|YP_304247.1| - 0.029 14.6 0.3 0.039 14.1 0.3 1.2 1 0 0 1 1 1 0 Tethering Ubl4a to BAGS domain PhosphMutase PF10143.9 gi|73668232|ref|YP_304247.1| - 0.047 13.6 0.0 0.051 13.4 0.0 1.0 1 0 0 1 1 1 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DDE_Tnp_1_2 PF13586.6 gi|73668233|ref|YP_304248.1| - 3.4e-10 40.2 0.7 3.9e-10 40.0 0.7 1.0 1 0 0 1 1 1 1 Transposase DDE domain Apelin PF15360.6 gi|73668233|ref|YP_304248.1| - 0.068 13.7 1.6 0.11 13.1 1.6 1.2 1 0 0 1 1 1 0 APJ endogenous ligand DUF2178 PF09946.9 gi|73668234|ref|YP_304249.1| - 3.6e-28 97.8 4.7 4.5e-28 97.5 4.7 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) DUF3796 PF12676.7 gi|73668234|ref|YP_304249.1| - 0.0032 17.9 5.7 0.0059 17.0 5.6 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3796) Neurensin PF14927.6 gi|73668234|ref|YP_304249.1| - 0.096 12.4 1.1 0.16 11.7 0.4 1.7 2 0 0 2 2 2 0 Neurensin Phenol_hyd_sub PF06099.11 gi|73668234|ref|YP_304249.1| - 0.12 12.4 0.1 0.23 11.5 0.1 1.4 1 0 0 1 1 1 0 Phenol hydroxylase subunit UbiA PF01040.18 gi|73668234|ref|YP_304249.1| - 0.52 9.6 9.6 1.3 8.3 9.6 1.5 1 1 0 1 1 1 0 UbiA prenyltransferase family DUF373 PF04123.13 gi|73668234|ref|YP_304249.1| - 5.8 6.3 8.4 7.5 5.9 8.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) HTH_3 PF01381.22 gi|73668235|ref|YP_304250.1| - 3.1e-16 59.2 0.0 4.1e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|73668235|ref|YP_304250.1| - 2.6e-09 36.9 0.1 3e-09 36.8 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|73668235|ref|YP_304250.1| - 3.3e-09 36.9 0.0 4.4e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|73668235|ref|YP_304250.1| - 4.7e-07 30.1 0.0 5.4e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.16 gi|73668235|ref|YP_304250.1| - 0.00038 19.9 0.0 0.0006 19.3 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_11 PF08279.12 gi|73668235|ref|YP_304250.1| - 0.003 17.5 0.0 0.0053 16.7 0.0 1.4 1 0 0 1 1 1 1 HTH domain YdaS_antitoxin PF15943.5 gi|73668235|ref|YP_304250.1| - 0.0048 16.7 0.0 0.007 16.2 0.0 1.2 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_25 PF13413.6 gi|73668235|ref|YP_304250.1| - 0.0052 16.6 0.0 0.0083 16.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|73668235|ref|YP_304250.1| - 0.018 15.0 0.0 0.031 14.3 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|73668235|ref|YP_304250.1| - 0.032 13.8 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MerR PF00376.23 gi|73668235|ref|YP_304250.1| - 0.061 13.1 0.0 1.6 8.5 0.0 2.2 2 0 0 2 2 2 0 MerR family regulatory protein HTH_Tnp_1_2 PF13022.6 gi|73668235|ref|YP_304250.1| - 0.098 12.8 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase DUF2642 PF10842.8 gi|73668236|ref|YP_304251.1| - 0.0083 16.0 0.1 0.0093 15.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2642) DUF150_C PF17384.2 gi|73668236|ref|YP_304251.1| - 0.027 14.6 0.0 0.033 14.3 0.0 1.1 1 0 0 1 1 1 0 RimP C-terminal SH3 domain Arginase PF00491.21 gi|73668237|ref|YP_304252.1| - 2.8e-78 263.3 0.0 3.1e-78 263.1 0.0 1.0 1 0 0 1 1 1 1 Arginase family eIF-5a PF01287.20 gi|73668238|ref|YP_304253.1| - 5.5e-07 29.6 0.6 5.5e-07 29.6 0.6 1.6 2 0 0 2 2 2 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|73668238|ref|YP_304253.1| - 8.1e-05 22.6 0.2 0.00015 21.7 0.1 1.5 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain AFOR_C PF01314.18 gi|73668239|ref|YP_304254.1| - 1.2e-86 291.1 0.0 7.5e-86 288.5 0.0 1.9 1 1 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|73668239|ref|YP_304254.1| - 3.5e-62 209.8 0.6 5e-62 209.3 0.6 1.2 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain NUDIX PF00293.28 gi|73668240|ref|YP_304255.1| - 3.1e-19 69.3 0.0 3.7e-19 69.1 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|73668240|ref|YP_304255.1| - 0.0017 18.3 0.0 0.0022 18.0 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain DUF2764 PF10962.8 gi|73668240|ref|YP_304255.1| - 0.14 11.6 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2764) PKD PF00801.20 gi|73668241|ref|YP_304256.1| - 3.7e-20 71.5 21.8 4.5e-10 39.2 2.1 3.9 3 0 0 3 3 3 3 PKD domain PGF-CTERM PF18204.1 gi|73668241|ref|YP_304256.1| - 7.8e-07 28.9 0.0 1.4e-06 28.0 0.0 1.5 1 0 0 1 1 1 1 PGF-CTERM motif PKD_3 PF16820.5 gi|73668241|ref|YP_304256.1| - 3.4e-06 26.7 2.5 0.018 14.8 0.2 2.6 2 0 0 2 2 2 2 PKD-like domain Peptidase_M10 PF00413.24 gi|73668242|ref|YP_304257.1| - 3.8e-16 59.3 0.0 9.1e-16 58.1 0.0 1.5 1 1 0 1 1 1 1 Matrixin Peptidase_M66 PF10462.9 gi|73668242|ref|YP_304257.1| - 0.00066 18.7 0.1 0.00089 18.3 0.1 1.1 1 0 0 1 1 1 1 Peptidase M66 Astacin PF01400.24 gi|73668242|ref|YP_304257.1| - 0.0015 18.2 0.1 0.0089 15.7 0.0 1.9 2 0 0 2 2 2 1 Astacin (Peptidase family M12A) Reprolysin_3 PF13582.6 gi|73668242|ref|YP_304257.1| - 0.0079 16.7 0.0 0.01 16.3 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.8 gi|73668242|ref|YP_304257.1| - 0.0096 14.6 0.0 0.013 14.1 0.0 1.1 1 0 0 1 1 1 1 Putative peptidase family Reprolysin_5 PF13688.6 gi|73668242|ref|YP_304257.1| - 0.14 12.3 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 CMD PF02627.20 gi|73668243|ref|YP_304258.1| - 1.6e-14 53.7 0.0 2.2e-14 53.3 0.0 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family MCR_C PF04609.12 gi|73668244|ref|YP_304259.1| - 3.7e-124 413.2 0.2 4.3e-124 413.0 0.2 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C DUF2113 PF09886.9 gi|73668245|ref|YP_304260.1| - 2.3e-66 222.7 0.2 2.6e-66 222.5 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) BcrAD_BadFG PF01869.20 gi|73668246|ref|YP_304261.1| - 8.9e-56 189.3 5.2 1.2e-55 188.9 5.2 1.2 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FGGY_C PF02782.16 gi|73668246|ref|YP_304261.1| - 0.0016 18.2 0.2 0.0041 16.9 0.2 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FtsA PF14450.6 gi|73668246|ref|YP_304261.1| - 0.0027 18.1 0.4 0.02 15.3 0.4 2.4 1 1 0 1 1 1 1 Cell division protein FtsA MutL PF13941.6 gi|73668246|ref|YP_304261.1| - 0.012 14.2 1.1 1 7.9 0.1 2.4 2 0 0 2 2 2 0 MutL protein Hydant_A_N PF05378.13 gi|73668246|ref|YP_304261.1| - 0.044 13.5 0.4 0.12 12.1 0.4 1.7 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase N-terminal region DUF4934 PF16288.5 gi|73668246|ref|YP_304261.1| - 0.089 12.7 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4934) DUF2112 PF09885.9 gi|73668247|ref|YP_304262.1| - 2.1e-64 215.9 0.0 2.5e-64 215.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) DUF2102 PF09875.9 gi|73668248|ref|YP_304263.1| - 1.3e-43 146.9 0.0 1.9e-43 146.3 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) Cut12 PF11500.8 gi|73668249|ref|YP_304264.1| - 0.0085 16.0 0.0 0.017 15.0 0.0 1.4 1 0 0 1 1 1 1 Spindle pole body formation-associated protein Fer2_4 PF13510.6 gi|73668249|ref|YP_304264.1| - 0.012 15.6 0.0 0.028 14.5 0.0 1.6 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Pro_isomerase PF00160.21 gi|73668249|ref|YP_304264.1| - 0.016 15.5 0.0 6.5 7.0 0.0 3.8 4 0 0 4 4 4 0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABC_tran PF00005.27 gi|73668250|ref|YP_304265.1| - 3.5e-50 170.1 0.4 1.2e-24 87.3 0.0 2.7 2 1 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 gi|73668250|ref|YP_304265.1| - 0.00018 21.4 0.4 0.34 10.8 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_21 PF13304.6 gi|73668250|ref|YP_304265.1| - 0.00048 20.0 2.8 1.2 8.9 0.0 3.5 3 1 1 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73668250|ref|YP_304265.1| - 0.0012 19.1 0.4 0.65 10.3 0.0 2.7 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|73668250|ref|YP_304265.1| - 0.0029 18.0 0.2 0.4 11.0 0.0 2.7 2 1 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 gi|73668250|ref|YP_304265.1| - 0.003 17.3 0.0 2.9 7.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|73668250|ref|YP_304265.1| - 0.0045 16.7 2.1 1.2 9.0 0.2 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain PRK PF00485.18 gi|73668250|ref|YP_304265.1| - 0.0045 16.7 0.2 3.4 7.4 0.0 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.6 gi|73668250|ref|YP_304265.1| - 0.0067 16.6 0.1 0.85 9.8 0.1 2.6 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|73668250|ref|YP_304265.1| - 0.0069 16.9 2.4 1.6 9.3 0.1 3.0 3 0 0 3 3 2 1 AAA domain MobB PF03205.14 gi|73668250|ref|YP_304265.1| - 0.0076 16.2 0.4 2.6 8.0 0.1 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B OrfB_Zn_ribbon PF07282.11 gi|73668250|ref|YP_304265.1| - 0.013 15.4 0.6 0.039 13.9 0.5 1.8 2 0 0 2 2 1 0 Putative transposase DNA-binding domain Mg_chelatase PF01078.21 gi|73668250|ref|YP_304265.1| - 0.014 14.8 0.2 0.56 9.6 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI NB-ARC PF00931.22 gi|73668250|ref|YP_304265.1| - 0.048 12.8 1.9 1.4 8.1 0.1 2.5 2 0 0 2 2 2 0 NB-ARC domain AAA_23 PF13476.6 gi|73668250|ref|YP_304265.1| - 0.055 14.0 2.8 2.3 8.7 0.2 2.4 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|73668250|ref|YP_304265.1| - 0.085 13.1 0.0 31 4.9 0.0 3.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit DUF87 PF01935.17 gi|73668250|ref|YP_304265.1| - 0.11 12.6 5.6 1.5 8.9 0.2 2.9 3 0 0 3 3 3 0 Helicase HerA, central domain DUF4796 PF16044.5 gi|73668250|ref|YP_304265.1| - 0.17 11.5 0.0 0.32 10.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4796) PhoH PF02562.16 gi|73668250|ref|YP_304265.1| - 0.19 11.2 1.0 1.3 8.4 0.0 2.6 3 0 0 3 3 3 0 PhoH-like protein NACHT PF05729.12 gi|73668250|ref|YP_304265.1| - 0.3 11.0 2.2 1.1 9.1 0.0 2.5 2 0 0 2 2 2 0 NACHT domain ATPase PF06745.13 gi|73668250|ref|YP_304265.1| - 0.42 9.9 5.0 1.5 8.1 0.1 3.0 3 0 0 3 3 3 0 KaiC TF_Zn_Ribbon PF08271.12 gi|73668250|ref|YP_304265.1| - 0.86 9.2 3.0 4.5 6.9 3.0 2.1 1 1 0 1 1 1 0 TFIIB zinc-binding AAA_24 PF13479.6 gi|73668250|ref|YP_304265.1| - 1.2 8.8 3.8 17 5.1 0.5 2.5 2 0 0 2 2 2 0 AAA domain zf-ribbon_3 PF13248.6 gi|73668250|ref|YP_304265.1| - 2.8 7.5 5.0 16 5.1 5.2 2.0 1 1 0 1 1 1 0 zinc-ribbon domain Hydrolase PF00702.26 gi|73668251|ref|YP_304266.1| - 2.3e-16 60.7 0.0 5e-16 59.6 0.0 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|73668251|ref|YP_304266.1| - 5.3e-05 23.1 1.5 0.06 13.1 0.2 2.9 2 2 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|73668251|ref|YP_304266.1| - 0.0016 18.4 0.0 0.0032 17.5 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like SPP PF06550.11 gi|73668252|ref|YP_304267.1| - 8e-111 370.0 30.1 9.5e-111 369.8 30.1 1.0 1 0 0 1 1 1 1 Signal-peptide peptidase, presenilin aspartyl protease Peptidase_A22B PF04258.13 gi|73668252|ref|YP_304267.1| - 2.5e-11 43.6 20.4 3.5e-11 43.2 20.4 1.2 1 0 0 1 1 1 1 Signal peptide peptidase Orthoreo_P10 PF07204.11 gi|73668252|ref|YP_304267.1| - 1 9.3 0.0 1 9.3 0.0 2.9 3 1 0 3 3 3 0 Orthoreovirus membrane fusion protein p10 Pentapeptide PF00805.22 gi|73668253|ref|YP_304268.1| - 2.8e-109 356.0 50.8 5.4e-14 51.5 1.7 9.7 4 2 4 10 10 10 9 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|73668253|ref|YP_304268.1| - 5.5e-59 196.3 9.8 1.5e-11 44.3 0.2 6.2 1 1 5 6 6 6 6 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|73668253|ref|YP_304268.1| - 6.7e-46 154.2 0.0 2.3e-06 27.6 0.0 8.9 1 1 8 9 9 9 9 Pentapeptide repeats (9 copies) NOD2_WH PF17779.1 gi|73668253|ref|YP_304268.1| - 1.5e-07 31.6 1.2 3.2 8.2 0.0 8.1 4 2 6 10 10 10 2 NOD2 winged helix domain DNA_ligase_OB PF03120.16 gi|73668253|ref|YP_304268.1| - 1.1e-05 25.2 6.7 11 6.0 0.1 7.3 1 1 6 8 8 8 1 NAD-dependent DNA ligase OB-fold domain Glyco_hydro_36N PF16875.5 gi|73668253|ref|YP_304268.1| - 0.076 12.6 0.1 3.8 7.0 0.0 3.2 1 1 2 4 4 4 0 Glycosyl hydrolase family 36 N-terminal domain APH PF01636.23 gi|73668254|ref|YP_304269.1| - 3e-09 37.2 0.0 6.5e-09 36.1 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family HAD_2 PF13419.6 gi|73668255|ref|YP_304270.1| - 6.3e-14 52.4 0.0 1.3e-13 51.4 0.0 1.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73668255|ref|YP_304270.1| - 4.3e-07 30.4 0.0 3.6e-06 27.4 0.0 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|73668255|ref|YP_304270.1| - 0.00021 21.3 0.0 0.00037 20.5 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Put_Phosphatase PF06888.12 gi|73668255|ref|YP_304270.1| - 0.048 13.0 0.0 0.68 9.3 0.0 2.1 2 0 0 2 2 2 0 Putative Phosphatase HAD_2 PF13419.6 gi|73668256|ref|YP_304271.1| - 4.8e-16 59.3 0.0 1.3e-15 57.9 0.0 1.6 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73668256|ref|YP_304271.1| - 7.9e-07 29.6 0.0 6.4e-06 26.6 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|73668256|ref|YP_304271.1| - 0.00034 20.1 0.2 0.48 9.8 0.0 2.9 2 1 0 3 3 3 2 Putative Phosphatase Hydrolase_like PF13242.6 gi|73668256|ref|YP_304271.1| - 0.0021 18.1 0.0 0.0036 17.3 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Aconitase PF00330.20 gi|73668257|ref|YP_304272.1| - 2e-181 604.0 0.0 2.7e-181 603.6 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|73668257|ref|YP_304272.1| - 3.2e-41 140.7 0.0 8.9e-41 139.3 0.0 1.8 2 0 0 2 2 2 1 Aconitase C-terminal domain Citrate_synt PF00285.21 gi|73668258|ref|YP_304273.1| - 1.3e-115 386.3 0.0 1.4e-115 386.2 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain UbiD PF01977.16 gi|73668259|ref|YP_304274.1| - 3.6e-116 388.4 0.4 4e-116 388.2 0.4 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Gln-synt_N_2 PF16952.5 gi|73668259|ref|YP_304274.1| - 0.15 11.9 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 Glutamine synthetase N-terminal domain DUF521 PF04412.13 gi|73668260|ref|YP_304275.1| - 3e-159 530.1 0.2 3.4e-159 529.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) DUF126 PF01989.16 gi|73668261|ref|YP_304276.1| - 7e-38 128.3 0.4 1.1e-37 127.7 0.4 1.3 1 0 0 1 1 1 1 Aconitase X swivel domain TrkA_C PF02080.21 gi|73668261|ref|YP_304276.1| - 0.065 13.1 0.1 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 TrkA-C domain Peptidase_M50 PF02163.22 gi|73668262|ref|YP_304277.1| - 1.7e-11 43.9 12.6 2.8e-08 33.4 0.5 2.5 1 1 1 2 2 2 2 Peptidase family M50 AgrB PF04647.15 gi|73668262|ref|YP_304277.1| - 0.11 11.8 3.1 0.18 11.1 1.6 1.9 2 0 0 2 2 2 0 Accessory gene regulator B Radical_SAM PF04055.21 gi|73668263|ref|YP_304278.1| - 3.5e-24 86.1 0.1 7.4e-23 81.7 0.0 2.1 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|73668263|ref|YP_304278.1| - 3.7e-11 43.1 0.1 8.8e-11 41.9 0.1 1.6 1 0 0 1 1 1 1 B12 binding domain PGM_PMM_I PF02878.16 gi|73668264|ref|YP_304279.1| - 5.6e-40 136.2 0.1 1.3e-39 135.1 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|73668264|ref|YP_304279.1| - 1.6e-27 96.1 0.0 4.1e-27 94.8 0.0 1.7 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|73668264|ref|YP_304279.1| - 2.4e-27 95.4 0.0 4.3e-27 94.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|73668264|ref|YP_304279.1| - 3e-12 46.5 0.0 9.7e-12 44.9 0.0 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain NAD_synthase PF02540.17 gi|73668265|ref|YP_304280.1| - 3.7e-07 29.5 0.0 5.8e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 NAD synthase QueC PF06508.13 gi|73668265|ref|YP_304280.1| - 2e-05 24.2 0.0 0.00033 20.2 0.0 2.4 1 1 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|73668265|ref|YP_304280.1| - 3.6e-05 23.6 0.1 7.6e-05 22.5 0.0 1.3 1 1 0 1 1 1 1 Asparagine synthase ThiI PF02568.14 gi|73668265|ref|YP_304280.1| - 0.00047 19.8 0.0 0.0015 18.1 0.0 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.20 gi|73668265|ref|YP_304280.1| - 0.0023 17.7 0.0 0.011 15.4 0.0 1.9 2 0 0 2 2 2 1 PP-loop family tRNA_Me_trans PF03054.16 gi|73668265|ref|YP_304280.1| - 0.11 11.2 0.2 0.82 8.4 0.1 2.1 2 1 0 2 2 2 0 tRNA methyl transferase Acetyltransf_1 PF00583.25 gi|73668266|ref|YP_304281.1| - 6.4e-13 49.0 0.0 8.1e-13 48.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73668266|ref|YP_304281.1| - 1.8e-12 47.5 0.0 2.5e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73668266|ref|YP_304281.1| - 8e-10 38.7 0.0 1.2e-09 38.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73668266|ref|YP_304281.1| - 5e-07 29.8 0.0 3.8e-06 27.0 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73668266|ref|YP_304281.1| - 5.1e-07 29.6 0.0 1.1e-06 28.5 0.0 1.5 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 gi|73668266|ref|YP_304281.1| - 3.2e-05 24.0 0.0 4.8e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 gi|73668266|ref|YP_304281.1| - 0.0062 16.0 0.0 0.0062 16.0 0.0 1.2 1 0 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_13 PF13880.6 gi|73668266|ref|YP_304281.1| - 0.077 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_3 PF13302.7 gi|73668266|ref|YP_304281.1| - 0.18 12.5 0.0 0.21 12.3 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PKD PF00801.20 gi|73668267|ref|YP_304282.1| - 3.4e-58 193.4 20.7 2.1e-15 56.3 0.7 4.3 4 0 0 4 4 4 4 PKD domain ChitinaseA_N PF08329.10 gi|73668267|ref|YP_304282.1| - 7.8e-07 28.8 2.7 0.98 9.1 0.0 4.4 4 0 0 4 4 4 3 Chitinase A, N-terminal domain MG2 PF01835.19 gi|73668267|ref|YP_304282.1| - 1.9e-05 25.0 14.6 1.1 9.8 0.1 5.1 2 1 3 5 5 5 3 MG2 domain PKD_3 PF16820.5 gi|73668267|ref|YP_304282.1| - 2.4e-05 24.0 7.9 0.19 11.5 0.2 4.7 4 0 0 4 4 4 3 PKD-like domain Kelch_4 PF13418.6 gi|73668267|ref|YP_304282.1| - 6.2e-05 22.9 5.7 18 5.4 0.0 6.4 6 0 0 6 6 6 0 Galactose oxidase, central domain PD40 PF07676.12 gi|73668267|ref|YP_304282.1| - 7.6e-05 22.5 18.4 0.69 9.9 0.1 7.0 6 1 0 6 6 6 2 WD40-like Beta Propeller Repeat Kelch_3 PF13415.6 gi|73668267|ref|YP_304282.1| - 0.0048 17.2 11.6 2.9 8.3 0.6 5.7 5 1 1 6 6 6 1 Galactose oxidase, central domain Big_4 PF07532.11 gi|73668267|ref|YP_304282.1| - 0.011 15.5 10.7 11 5.9 0.1 5.0 4 0 0 4 4 4 0 Bacterial Ig-like domain (group 4) Phage_Cox PF10743.9 gi|73668267|ref|YP_304282.1| - 0.059 13.5 2.0 0.69 10.0 0.2 2.5 2 0 0 2 2 2 0 Regulatory phage protein cox SoxZ PF08770.11 gi|73668267|ref|YP_304282.1| - 0.096 12.5 2.1 6.4 6.6 0.2 3.7 3 0 0 3 3 3 0 Sulphur oxidation protein SoxZ DUF5011 PF16403.5 gi|73668267|ref|YP_304282.1| - 0.35 11.0 22.1 1.2 9.3 0.5 4.8 4 0 0 4 4 4 0 Domain of unknown function (DUF5011) He_PIG PF05345.12 gi|73668267|ref|YP_304282.1| - 3.4 7.9 20.6 13 6.1 0.3 5.5 6 0 0 6 6 6 0 Putative Ig domain PKD PF00801.20 gi|73668268|ref|YP_304283.1| - 1.8e-05 24.5 0.1 2.3e-05 24.2 0.1 1.1 1 0 0 1 1 1 1 PKD domain PKD PF00801.20 gi|73668269|ref|YP_304284.1| - 8.2e-29 99.3 6.6 8.6e-14 51.1 0.2 2.4 2 0 0 2 2 2 2 PKD domain Pectate_lyase22 PF14583.6 gi|73668269|ref|YP_304284.1| - 8.9e-07 27.9 4.3 0.21 10.2 0.0 4.5 2 2 3 5 5 5 3 Oligogalacturonate lyase DPPIV_N PF00930.21 gi|73668269|ref|YP_304284.1| - 0.00019 20.4 0.5 0.00019 20.4 0.5 4.6 4 2 1 5 5 5 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region Kelch_4 PF13418.6 gi|73668269|ref|YP_304284.1| - 0.00076 19.4 10.2 28 4.8 0.0 6.9 7 0 0 7 7 7 1 Galactose oxidase, central domain PKD_3 PF16820.5 gi|73668269|ref|YP_304284.1| - 0.011 15.4 1.8 0.069 12.9 0.1 2.9 3 0 0 3 3 3 0 PKD-like domain Kelch_3 PF13415.6 gi|73668269|ref|YP_304284.1| - 0.77 10.1 20.4 4.2 7.8 0.6 6.0 5 2 1 6 6 6 0 Galactose oxidase, central domain DUF531 PF04407.12 gi|73668270|ref|YP_304285.1| - 1.2e-80 269.5 0.0 1.4e-80 269.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF531) AKAP95 PF04988.12 gi|73668271|ref|YP_304286.1| - 0.033 14.4 0.1 0.037 14.3 0.1 1.0 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) Aminotran_5 PF00266.19 gi|73668272|ref|YP_304287.1| - 1.1e-127 426.1 0.0 1.2e-127 425.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|73668272|ref|YP_304287.1| - 1.2e-09 37.3 0.0 2e-09 36.5 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|73668272|ref|YP_304287.1| - 1.5e-09 37.6 0.0 2.3e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|73668272|ref|YP_304287.1| - 8.8e-09 35.0 0.1 8.4e-08 31.8 0.0 1.9 2 0 0 2 2 2 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|73668272|ref|YP_304287.1| - 4e-08 32.9 0.0 5.5e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase SepSecS PF05889.13 gi|73668272|ref|YP_304287.1| - 0.0055 15.5 0.0 0.011 14.4 0.0 1.4 1 1 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS SHMT PF00464.19 gi|73668272|ref|YP_304287.1| - 0.017 13.7 0.0 0.025 13.2 0.0 1.1 1 0 0 1 1 1 0 Serine hydroxymethyltransferase OKR_DC_1 PF01276.20 gi|73668272|ref|YP_304287.1| - 0.022 13.5 0.2 0.072 11.8 0.2 1.7 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Alpha-amylase PF00128.24 gi|73668272|ref|YP_304287.1| - 0.04 13.5 0.0 0.07 12.7 0.0 1.3 1 0 0 1 1 1 0 Alpha amylase, catalytic domain Transketolase_C PF02780.20 gi|73668272|ref|YP_304287.1| - 0.041 13.8 0.0 0.073 12.9 0.0 1.4 1 0 0 1 1 1 0 Transketolase, C-terminal domain S_100 PF01023.19 gi|73668272|ref|YP_304287.1| - 0.084 12.6 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain Methyltransf_25 PF13649.6 gi|73668273|ref|YP_304288.1| - 2.5e-21 76.2 0.0 1.2e-20 74.0 0.0 2.1 2 1 1 3 3 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668273|ref|YP_304288.1| - 4.9e-21 75.1 0.2 2.4e-20 72.9 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73668273|ref|YP_304288.1| - 1.1e-19 70.8 0.0 5.7e-19 68.6 0.0 2.1 3 0 0 3 3 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668273|ref|YP_304288.1| - 7.4e-17 61.9 0.0 2e-16 60.6 0.0 1.8 2 1 1 3 3 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73668273|ref|YP_304288.1| - 7.3e-16 58.4 0.0 1.1e-15 57.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73668273|ref|YP_304288.1| - 9.4e-10 38.3 0.0 1.5e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|73668273|ref|YP_304288.1| - 1.2e-08 34.6 0.0 2.5e-08 33.5 0.0 1.5 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase NodS PF05401.11 gi|73668273|ref|YP_304288.1| - 1.4e-08 34.6 0.0 2e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Ubie_methyltran PF01209.18 gi|73668273|ref|YP_304288.1| - 2.2e-08 33.7 0.0 5e-08 32.6 0.0 1.6 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|73668273|ref|YP_304288.1| - 1.1e-06 28.3 0.0 1.6e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|73668273|ref|YP_304288.1| - 3.9e-06 26.5 0.0 5.8e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.12 gi|73668273|ref|YP_304288.1| - 6.6e-06 25.4 0.0 9.8e-06 24.9 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_32 PF13679.6 gi|73668273|ref|YP_304288.1| - 1e-05 25.6 0.1 5.2e-05 23.3 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 gi|73668273|ref|YP_304288.1| - 1.2e-05 25.1 0.0 2.4e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TehB PF03848.14 gi|73668273|ref|YP_304288.1| - 0.00012 21.5 0.2 0.00026 20.4 0.0 1.6 2 0 0 2 2 2 1 Tellurite resistance protein TehB RrnaAD PF00398.20 gi|73668273|ref|YP_304288.1| - 0.00014 21.0 0.0 0.00039 19.6 0.0 1.6 1 1 1 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.17 gi|73668273|ref|YP_304288.1| - 0.00083 18.9 0.2 0.0084 15.6 0.0 2.3 2 1 1 3 3 3 1 Putative methyltransferase Methyltransf_PK PF05891.12 gi|73668273|ref|YP_304288.1| - 0.0025 17.4 0.0 0.0053 16.3 0.0 1.5 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase FtsJ PF01728.19 gi|73668273|ref|YP_304288.1| - 0.0048 17.0 0.0 0.0078 16.3 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltr_RsmB-F PF01189.17 gi|73668273|ref|YP_304288.1| - 0.0075 15.9 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_9 PF08003.11 gi|73668273|ref|YP_304288.1| - 0.014 14.4 0.0 0.02 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) TPMT PF05724.11 gi|73668273|ref|YP_304288.1| - 0.039 13.6 0.0 0.067 12.8 0.0 1.4 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) UPF0020 PF01170.18 gi|73668273|ref|YP_304288.1| - 0.1 12.3 0.1 0.52 10.0 0.1 2.0 1 1 1 2 2 2 0 Putative RNA methylase family UPF0020 T2SSE PF00437.20 gi|73668274|ref|YP_304289.1| - 1.2e-44 152.4 0.0 2e-44 151.7 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|73668274|ref|YP_304289.1| - 0.0089 15.8 0.1 0.025 14.3 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain FAD_binding_8 PF08022.12 gi|73668274|ref|YP_304289.1| - 0.027 14.6 0.0 0.78 9.9 0.0 2.4 2 0 0 2 2 2 0 FAD-binding domain Zeta_toxin PF06414.12 gi|73668274|ref|YP_304289.1| - 0.039 13.2 0.0 0.82 8.9 0.0 2.2 2 0 0 2 2 2 0 Zeta toxin AAA_7 PF12775.7 gi|73668274|ref|YP_304289.1| - 0.058 12.9 0.2 0.2 11.1 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region T2SSF PF00482.23 gi|73668275|ref|YP_304290.1| - 1.2e-38 131.9 15.0 2.1e-19 69.7 0.2 4.0 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F DUF2207 PF09972.9 gi|73668275|ref|YP_304290.1| - 0.038 12.8 17.1 0.59 8.8 0.0 3.8 3 1 0 3 3 3 0 Predicted membrane protein (DUF2207) Pex24p PF06398.11 gi|73668275|ref|YP_304290.1| - 3.2 6.6 17.4 6.8 5.6 0.9 3.0 1 1 1 2 2 2 0 Integral peroxisomal membrane peroxin PMEI PF04043.15 gi|73668276|ref|YP_304291.1| - 0.014 15.7 0.2 0.017 15.4 0.2 1.2 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor Peptidase_C1 PF00112.23 gi|73668277|ref|YP_304292.1| - 1.9e-12 47.7 0.0 1.6e-11 44.7 0.0 1.9 1 1 0 1 1 1 1 Papain family cysteine protease SWIM PF04434.17 gi|73668278|ref|YP_304293.1| - 0.012 15.3 0.6 0.023 14.4 0.6 1.4 1 0 0 1 1 1 0 SWIM zinc finger DUF2277 PF10041.9 gi|73668278|ref|YP_304293.1| - 0.063 13.6 0.0 3.5 8.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2277) Fer4 PF00037.27 gi|73668279|ref|YP_304294.1| - 7.1e-18 63.6 22.2 1.1e-09 37.6 6.9 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73668279|ref|YP_304294.1| - 1.4e-10 41.2 16.2 1.7e-10 40.9 16.2 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73668279|ref|YP_304294.1| - 5.8e-10 39.1 31.9 1.3e-07 31.6 17.7 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668279|ref|YP_304294.1| - 6.3e-10 39.5 16.6 1.4e-09 38.4 16.7 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73668279|ref|YP_304294.1| - 1.6e-09 37.4 20.9 4.8e-05 23.2 3.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73668279|ref|YP_304294.1| - 1.6e-09 37.3 19.4 9.2e-05 22.3 3.4 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73668279|ref|YP_304294.1| - 2.5e-09 37.1 18.6 1.1e-08 35.1 18.6 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668279|ref|YP_304294.1| - 3.6e-08 34.2 15.7 0.00048 21.0 3.6 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|73668279|ref|YP_304294.1| - 1.4e-07 31.4 19.0 0.00018 21.8 3.6 2.3 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73668279|ref|YP_304294.1| - 1.2e-05 25.7 28.0 0.012 16.1 2.8 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73668279|ref|YP_304294.1| - 4.9e-05 24.0 23.3 0.0085 17.0 5.9 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|73668279|ref|YP_304294.1| - 5e-05 23.3 9.1 5.6e-05 23.2 9.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|73668279|ref|YP_304294.1| - 5.6e-05 23.9 11.3 0.0085 16.9 1.8 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73668279|ref|YP_304294.1| - 6.3e-05 23.3 18.2 0.018 15.4 4.2 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73668279|ref|YP_304294.1| - 0.00017 22.1 20.8 0.011 16.3 5.9 2.7 2 1 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|73668279|ref|YP_304294.1| - 0.013 16.2 23.1 0.2 12.4 7.8 3.4 1 1 2 3 3 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|73668279|ref|YP_304294.1| - 0.041 14.1 15.8 0.11 12.7 15.8 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain UDG PF03167.19 gi|73668280|ref|YP_304295.1| - 2.9e-11 43.6 0.0 3.3e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DUF1724 PF08350.10 gi|73668281|ref|YP_304296.1| - 2.2e-21 75.7 0.5 4.8e-21 74.7 0.5 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|73668281|ref|YP_304296.1| - 8.9e-06 25.5 0.9 1.7e-05 24.5 0.6 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|73668281|ref|YP_304296.1| - 0.0065 16.9 0.0 0.012 16.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|73668281|ref|YP_304296.1| - 0.01 15.7 0.8 0.04 13.8 0.1 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|73668281|ref|YP_304296.1| - 0.085 12.9 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|73668281|ref|YP_304296.1| - 0.1 12.6 0.1 0.22 11.5 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_24 PF13412.6 gi|73668281|ref|YP_304296.1| - 0.11 12.1 0.5 0.21 11.2 0.5 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|73668281|ref|YP_304296.1| - 0.16 11.9 0.2 0.48 10.4 0.2 1.8 1 0 0 1 1 1 0 MarR family DUF1724 PF08350.10 gi|73668282|ref|YP_304297.1| - 4.8e-17 61.9 0.1 1.1e-16 60.7 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|73668282|ref|YP_304297.1| - 0.0003 20.6 0.2 0.00057 19.7 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|73668282|ref|YP_304297.1| - 0.00089 19.2 0.1 0.002 18.0 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.7 gi|73668282|ref|YP_304297.1| - 0.0009 19.3 0.0 0.0019 18.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|73668282|ref|YP_304297.1| - 0.0067 16.4 0.1 0.016 15.2 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|73668282|ref|YP_304297.1| - 0.053 13.4 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 MarR family PadR PF03551.14 gi|73668282|ref|YP_304297.1| - 0.12 12.4 0.1 1.4 8.9 0.0 2.6 2 1 0 2 2 2 0 Transcriptional regulator PadR-like family DUF4298 PF14131.6 gi|73668282|ref|YP_304297.1| - 0.16 12.0 1.0 1 9.4 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) B12-binding PF02310.19 gi|73668283|ref|YP_304298.1| - 1.3e-17 64.0 0.3 2e-17 63.4 0.3 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|73668283|ref|YP_304298.1| - 4.1e-15 56.0 1.2 9.9e-15 54.7 0.2 2.2 2 1 0 2 2 2 1 B12 binding domain UPF0180 PF03698.13 gi|73668283|ref|YP_304298.1| - 0.097 12.9 0.0 0.25 11.5 0.0 1.8 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) MtaB PF12176.8 gi|73668284|ref|YP_304299.1| - 1.5e-234 779.0 5.1 1.7e-234 778.8 5.1 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit HAD_2 PF13419.6 gi|73668285|ref|YP_304300.1| - 5.9e-35 120.9 0.1 7e-35 120.7 0.1 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73668285|ref|YP_304300.1| - 3.7e-18 66.6 0.0 1.3e-16 61.5 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|73668285|ref|YP_304300.1| - 5.8e-05 23.1 0.0 0.0001 22.3 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|73668285|ref|YP_304300.1| - 0.00028 21.4 0.0 0.00037 21.0 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NIF PF03031.18 gi|73668285|ref|YP_304300.1| - 0.0027 17.5 0.0 0.016 15.0 0.0 2.1 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase AAA_14 PF13173.6 gi|73668285|ref|YP_304300.1| - 0.0067 16.5 0.1 0.073 13.1 0.1 2.3 1 1 0 1 1 1 1 AAA domain Hydrolase_6 PF13344.6 gi|73668285|ref|YP_304300.1| - 0.01 16.0 0.3 5.9 7.1 0.2 3.5 2 2 1 3 3 3 0 Haloacid dehalogenase-like hydrolase PLDc_2 PF13091.6 gi|73668285|ref|YP_304300.1| - 0.054 13.4 0.1 0.76 9.7 0.1 2.1 2 0 0 2 2 2 0 PLD-like domain SelR PF01641.18 gi|73668286|ref|YP_304301.1| - 4.9e-57 191.3 0.3 5.7e-57 191.0 0.3 1.0 1 0 0 1 1 1 1 SelR domain zinc_ribbon_10 PF10058.9 gi|73668286|ref|YP_304301.1| - 0.00067 19.3 0.8 0.025 14.3 0.0 2.2 2 0 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein TF_Zn_Ribbon PF08271.12 gi|73668286|ref|YP_304301.1| - 0.0012 18.3 1.3 1.1 8.8 0.0 2.6 2 1 0 2 2 2 2 TFIIB zinc-binding Yippee-Mis18 PF03226.14 gi|73668286|ref|YP_304301.1| - 0.0091 16.2 0.3 0.021 15.0 0.3 1.7 1 1 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly ADD_ATRX PF17981.1 gi|73668286|ref|YP_304301.1| - 0.012 15.5 0.1 2.3 8.1 0.0 2.3 2 0 0 2 2 2 0 Cysteine Rich ADD domain DUF2318 PF10080.9 gi|73668286|ref|YP_304301.1| - 0.014 15.5 0.7 4.9 7.3 0.1 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) zf-ribbon_3 PF13248.6 gi|73668286|ref|YP_304301.1| - 0.016 14.6 0.8 3.4 7.2 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain HNH_5 PF14279.6 gi|73668286|ref|YP_304301.1| - 0.02 14.8 0.1 0.6 10.0 0.0 2.2 2 0 0 2 2 2 0 HNH endonuclease zf_UBZ PF18439.1 gi|73668286|ref|YP_304301.1| - 0.02 14.5 0.5 5.2 6.7 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger HECT_2 PF09814.9 gi|73668286|ref|YP_304301.1| - 0.04 12.8 0.2 0.28 10.0 0.3 1.8 1 1 1 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding DZR PF12773.7 gi|73668286|ref|YP_304301.1| - 0.056 13.5 0.7 0.35 10.9 0.7 2.2 1 1 0 1 1 1 0 Double zinc ribbon Ribosomal_L37e PF01907.19 gi|73668286|ref|YP_304301.1| - 0.088 13.0 0.3 14 6.0 0.0 2.4 2 0 0 2 2 2 0 Ribosomal protein L37e DUF678 PF05077.12 gi|73668286|ref|YP_304301.1| - 0.12 12.6 0.1 21 5.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF678) Zn_Tnp_IS1595 PF12760.7 gi|73668286|ref|YP_304301.1| - 0.12 12.3 1.6 11 6.1 0.2 2.4 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|73668286|ref|YP_304301.1| - 0.14 11.9 1.9 8.9 6.2 0.0 2.5 3 0 0 3 3 3 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|73668286|ref|YP_304301.1| - 1.5 8.6 5.7 13 5.5 0.4 3.1 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain DUF2304 PF10066.9 gi|73668287|ref|YP_304302.1| - 0.02 15.1 8.3 0.76 10.0 4.9 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) DUF4181 PF13789.6 gi|73668287|ref|YP_304302.1| - 0.28 11.5 11.5 0.73 10.1 5.8 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4181) PEN-2 PF10251.9 gi|73668287|ref|YP_304302.1| - 0.29 11.6 5.4 0.76 10.2 2.2 2.4 2 1 0 2 2 2 0 Presenilin enhancer-2 subunit of gamma secretase DUF3754 PF12576.8 gi|73668287|ref|YP_304302.1| - 1.4 8.8 4.1 2.4 8.1 0.1 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF3754) HXXEE PF13787.6 gi|73668287|ref|YP_304302.1| - 4.1 8.2 10.9 0.7 10.7 2.9 2.6 1 1 2 3 3 3 0 Protein of unknown function with HXXEE motif DUF373 PF04123.13 gi|73668287|ref|YP_304302.1| - 5.5 6.3 6.7 3.6 7.0 3.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF373) DUF4711 PF15829.5 gi|73668287|ref|YP_304302.1| - 7.6 6.4 6.9 0.42 10.5 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4711) DUF2807 PF10988.8 gi|73668288|ref|YP_304303.1| - 4.1e-45 153.8 5.2 5.7e-45 153.3 2.7 2.0 2 0 0 2 2 2 1 Putative auto-transporter adhesin, head GIN domain MacB_PCD PF12704.7 gi|73668289|ref|YP_304304.1| - 1.1e-24 87.9 3.1 2e-24 87.0 3.1 1.5 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|73668289|ref|YP_304304.1| - 7.3e-11 42.4 4.9 7.3e-11 42.4 4.9 3.1 3 0 0 3 3 3 1 FtsX-like permease family Ribosomal_S4Pg PF11993.8 gi|73668289|ref|YP_304304.1| - 0.084 12.9 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Ribosomal S4P (gammaproteobacterial) TIR_2 PF13676.6 gi|73668290|ref|YP_304305.1| - 2.6e-14 53.8 0.3 1.4e-13 51.4 0.1 2.3 3 0 0 3 3 3 1 TIR domain DUF919 PF06034.11 gi|73668290|ref|YP_304305.1| - 0.85 9.5 7.8 0.24 11.3 2.4 2.7 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) FMN_red PF03358.15 gi|73668291|ref|YP_304306.1| - 3.1e-22 79.0 0.0 3.5e-22 78.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73668291|ref|YP_304306.1| - 6.2e-17 62.0 0.0 7.4e-17 61.7 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|73668291|ref|YP_304306.1| - 0.094 12.9 0.0 0.18 12.1 0.0 1.5 2 0 0 2 2 2 0 Flavodoxin domain DUF308 PF03729.13 gi|73668292|ref|YP_304307.1| - 2.2e-15 56.7 52.3 5.8e-10 39.3 18.5 3.1 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) AA_permease_C PF13906.6 gi|73668292|ref|YP_304307.1| - 0.033 14.3 1.5 0.033 14.3 1.5 3.7 3 3 1 4 4 4 0 C-terminus of AA_permease DDE_Tnp_IS1 PF03400.13 gi|73668293|ref|YP_304308.1| - 0.075 13.4 0.0 0.077 13.3 0.0 1.1 1 0 0 1 1 1 0 IS1 transposase DUF2341 PF10102.9 gi|73668294|ref|YP_304309.1| - 8.4e-28 96.8 0.6 2.2e-27 95.5 0.6 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF2341) PDE8 PF08629.10 gi|73668294|ref|YP_304309.1| - 2.2 8.3 4.2 3.2 7.8 0.1 2.9 3 0 0 3 3 3 0 PDE8 phosphodiesterase dUTPase PF00692.19 gi|73668295|ref|YP_304310.1| - 2.1e-09 37.1 0.0 3e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|73668295|ref|YP_304310.1| - 0.041 12.7 0.0 0.071 11.9 0.0 1.6 1 1 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DeoC PF01791.9 gi|73668296|ref|YP_304311.1| - 1.5e-62 211.3 0.1 2.1e-62 210.8 0.1 1.2 1 0 0 1 1 1 1 DeoC/LacD family aldolase OMPdecase PF00215.24 gi|73668296|ref|YP_304311.1| - 1.1e-05 25.2 0.1 1.6e-05 24.6 0.1 1.2 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family ThiG PF05690.14 gi|73668296|ref|YP_304311.1| - 0.041 13.2 1.3 0.082 12.2 0.1 1.9 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG DUF2663 PF10864.8 gi|73668297|ref|YP_304312.1| - 0.0098 16.3 3.6 0.01 16.2 3.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2663) DctQ PF04290.12 gi|73668297|ref|YP_304312.1| - 0.015 15.2 0.4 0.016 15.1 0.4 1.1 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component 7tm_7 PF08395.12 gi|73668297|ref|YP_304312.1| - 0.026 13.7 4.0 0.028 13.6 4.0 1.0 1 0 0 1 1 1 0 7tm Chemosensory receptor Presenilin PF01080.17 gi|73668297|ref|YP_304312.1| - 0.063 12.0 3.0 0.072 11.8 3.0 1.0 1 0 0 1 1 1 0 Presenilin DUF1372 PF07116.11 gi|73668297|ref|YP_304312.1| - 0.33 11.1 3.1 0.73 10.0 0.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1372) DUF2207 PF09972.9 gi|73668297|ref|YP_304312.1| - 0.47 9.2 3.0 0.49 9.1 3.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Radical_SAM PF04055.21 gi|73668298|ref|YP_304313.1| - 4.2e-10 40.2 0.2 8.6e-10 39.2 0.2 1.6 1 0 0 1 1 1 1 Radical SAM superfamily cobW PF02492.19 gi|73668299|ref|YP_304314.1| - 5.8e-38 130.2 0.2 8.9e-38 129.6 0.2 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.22 gi|73668299|ref|YP_304314.1| - 0.013 15.1 0.4 0.027 14.1 0.4 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|73668299|ref|YP_304314.1| - 0.017 14.1 1.2 0.05 12.6 1.2 1.9 1 1 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Viral_helicase1 PF01443.18 gi|73668299|ref|YP_304314.1| - 0.037 13.8 0.1 0.091 12.5 0.1 1.7 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase T2SSE PF00437.20 gi|73668299|ref|YP_304314.1| - 0.24 10.4 1.8 0.57 9.2 0.5 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein Zeta_toxin PF06414.12 gi|73668299|ref|YP_304314.1| - 0.49 9.6 2.2 0.73 9.1 0.1 2.2 2 0 0 2 2 2 0 Zeta toxin AAA_11 PF13086.6 gi|73668299|ref|YP_304314.1| - 2.7 7.7 9.0 4.6 6.9 0.1 2.8 3 1 0 3 3 3 0 AAA domain CbiA PF01656.23 gi|73668299|ref|YP_304314.1| - 2.8 8.0 4.2 2.7 8.1 0.9 2.4 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain HTH_45 PF14947.6 gi|73668300|ref|YP_304315.1| - 0.013 15.5 0.0 0.02 14.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix Scaffolding_pro PF11418.8 gi|73668300|ref|YP_304315.1| - 0.027 15.0 0.0 0.031 14.8 0.0 1.2 1 0 0 1 1 1 0 Phi29 scaffolding protein Fer4 PF00037.27 gi|73668301|ref|YP_304316.1| - 3.3e-18 64.7 19.6 5.4e-09 35.5 5.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73668301|ref|YP_304316.1| - 2.1e-12 47.0 26.0 4.1e-09 36.4 14.2 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73668301|ref|YP_304316.1| - 4.2e-12 46.0 12.3 4.9e-12 45.8 12.3 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668301|ref|YP_304316.1| - 1.5e-11 44.7 12.0 2e-11 44.3 12.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668301|ref|YP_304316.1| - 3.9e-10 40.5 12.1 4.8e-05 24.2 1.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|73668301|ref|YP_304316.1| - 5.7e-10 38.7 15.7 8.6e-05 22.4 3.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73668301|ref|YP_304316.1| - 1.4e-09 37.6 19.5 1.6e-05 24.7 6.3 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73668301|ref|YP_304316.1| - 1.7e-09 37.6 14.4 2.8e-09 37.0 14.4 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73668301|ref|YP_304316.1| - 4.2e-08 33.1 13.9 0.00041 20.6 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73668301|ref|YP_304316.1| - 3.6e-07 30.6 25.5 0.0034 17.9 2.4 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73668301|ref|YP_304316.1| - 1e-06 29.1 14.8 0.0043 17.6 4.6 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_11 PF13247.6 gi|73668301|ref|YP_304316.1| - 2e-06 27.9 6.1 2e-06 27.9 6.1 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73668301|ref|YP_304316.1| - 1.4e-05 25.7 19.0 0.013 16.4 6.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73668301|ref|YP_304316.1| - 3e-05 24.4 15.6 0.0094 16.4 15.6 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|73668301|ref|YP_304316.1| - 3.8e-05 24.4 7.7 0.05 14.5 0.7 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73668301|ref|YP_304316.1| - 0.00033 21.3 17.1 0.5 11.2 17.1 2.8 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|73668301|ref|YP_304316.1| - 0.032 14.4 12.3 0.066 13.4 12.3 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|73668301|ref|YP_304316.1| - 0.52 10.5 8.2 1 9.6 0.9 2.0 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Semialdhyde_dh PF01118.24 gi|73668302|ref|YP_304317.1| - 8.5e-36 123.1 0.0 1.4e-35 122.4 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|73668302|ref|YP_304317.1| - 2.3e-35 122.3 0.0 3.7e-35 121.7 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain NAD_binding_10 PF13460.6 gi|73668302|ref|YP_304317.1| - 0.00061 19.7 0.1 0.00092 19.1 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding DXP_reductoisom PF02670.16 gi|73668302|ref|YP_304317.1| - 0.002 18.8 0.0 0.004 17.9 0.0 1.5 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase GFO_IDH_MocA PF01408.22 gi|73668302|ref|YP_304317.1| - 0.0091 16.8 0.0 0.015 16.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.20 gi|73668302|ref|YP_304317.1| - 0.014 15.6 0.0 0.025 14.7 0.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 gi|73668302|ref|YP_304317.1| - 0.015 15.6 0.0 0.024 14.9 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF111 PF01969.17 gi|73668303|ref|YP_304318.1| - 1.2e-120 403.0 0.1 1.4e-120 402.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 AIRC PF00731.20 gi|73668304|ref|YP_304319.1| - 1.6e-15 56.9 4.7 2.6e-15 56.3 4.7 1.3 1 0 0 1 1 1 1 AIR carboxylase DUF3721 PF12518.8 gi|73668304|ref|YP_304319.1| - 0.56 10.1 2.1 1.7 8.6 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function Aldo_ket_red PF00248.21 gi|73668305|ref|YP_304320.1| - 1.2e-38 133.0 0.0 3e-37 128.4 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|73668305|ref|YP_304320.1| - 2.7e-12 47.0 7.2 6.5e-12 45.8 7.2 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73668305|ref|YP_304320.1| - 1e-09 38.4 7.0 1.9e-09 37.5 7.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73668305|ref|YP_304320.1| - 6e-06 26.4 1.0 0.0033 17.6 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73668305|ref|YP_304320.1| - 6.2e-05 23.4 6.4 0.00014 22.2 6.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73668305|ref|YP_304320.1| - 8.2e-05 22.7 5.1 0.12 12.6 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|73668305|ref|YP_304320.1| - 0.00031 20.5 3.1 0.00043 20.0 0.1 2.1 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_16 PF13484.6 gi|73668305|ref|YP_304320.1| - 0.00077 20.4 3.4 0.021 15.7 0.3 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|73668305|ref|YP_304320.1| - 0.002 18.2 11.9 0.0062 16.6 1.3 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|73668305|ref|YP_304320.1| - 0.0032 18.3 3.2 0.39 11.6 0.4 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73668305|ref|YP_304320.1| - 0.0048 16.7 1.5 0.0048 16.7 1.5 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain PA_decarbox PF05870.11 gi|73668305|ref|YP_304320.1| - 0.096 12.3 0.3 1.2 8.7 0.0 2.3 2 1 1 3 3 3 0 Phenolic acid decarboxylase (PAD) Fer4_7 PF12838.7 gi|73668305|ref|YP_304320.1| - 0.44 11.2 13.6 5.2 7.7 14.0 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Med27 PF11571.8 gi|73668305|ref|YP_304320.1| - 0.78 10.1 3.2 11 6.4 0.1 2.4 1 1 0 2 2 2 0 Mediator complex subunit 27 Fer4_4 PF12800.7 gi|73668305|ref|YP_304320.1| - 1.1 9.9 13.3 0.9 10.2 2.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|73668305|ref|YP_304320.1| - 4.1 8.6 15.3 1.3 10.2 5.4 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73668305|ref|YP_304320.1| - 8.7 6.6 13.4 0.25 11.5 1.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain DLH PF01738.18 gi|73668306|ref|YP_304321.1| - 7.8e-08 32.1 0.3 8.2e-07 28.8 0.3 2.3 1 1 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 gi|73668306|ref|YP_304321.1| - 1.1e-06 28.5 0.1 1.5e-06 28.0 0.1 1.1 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Hydrolase_4 PF12146.8 gi|73668306|ref|YP_304321.1| - 0.00014 21.2 0.1 0.0024 17.2 0.1 2.2 2 0 0 2 2 2 1 Serine aminopeptidase, S33 AXE1 PF05448.12 gi|73668306|ref|YP_304321.1| - 0.00049 18.9 0.2 0.001 17.9 0.1 1.5 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 gi|73668306|ref|YP_304321.1| - 0.00076 19.0 0.0 0.0092 15.5 0.1 2.2 2 0 0 2 2 2 1 Prolyl oligopeptidase family BAAT_C PF08840.11 gi|73668306|ref|YP_304321.1| - 0.002 18.1 0.0 0.003 17.5 0.0 1.3 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Cyclophil_like2 PF18050.1 gi|73668307|ref|YP_304322.1| - 4.3e-52 175.0 0.7 2.2e-26 92.0 0.1 2.2 2 0 0 2 2 2 2 Cyclophilin-like family Cyclophil_like PF04126.13 gi|73668307|ref|YP_304322.1| - 7.8e-10 38.6 0.0 1.5e-05 24.8 0.0 2.3 2 0 0 2 2 2 2 Cyclophilin-like DUF824 PF05688.11 gi|73668307|ref|YP_304322.1| - 0.21 11.4 0.9 6.9 6.6 0.0 3.0 3 0 0 3 3 3 0 Salmonella repeat of unknown function (DUF824) DUF3737 PF12541.8 gi|73668308|ref|YP_304323.1| - 1.6e-117 391.6 1.7 2.1e-117 391.2 1.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3737) Beta_helix PF13229.6 gi|73668308|ref|YP_304323.1| - 4e-05 23.5 0.3 0.071 13.0 0.2 3.3 1 1 1 2 2 2 2 Right handed beta helix region Hexapep PF00132.24 gi|73668309|ref|YP_304324.1| - 2e-13 49.5 4.2 1e-08 34.5 0.6 3.4 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73668309|ref|YP_304324.1| - 4.9e-10 39.0 1.4 2.7e-06 27.0 0.1 2.8 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Mac PF12464.8 gi|73668309|ref|YP_304324.1| - 0.0049 17.1 0.0 0.01 16.1 0.0 1.5 2 0 0 2 2 2 1 Maltose acetyltransferase CMD PF02627.20 gi|73668310|ref|YP_304325.1| - 1.6e-28 98.6 0.0 4.1e-13 49.2 0.0 2.1 2 0 0 2 2 2 2 Carboxymuconolactone decarboxylase family Aldo_ket_red PF00248.21 gi|73668311|ref|YP_304326.1| - 1.7e-41 142.4 0.0 4.3e-40 137.8 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|73668311|ref|YP_304326.1| - 1.8e-11 44.4 3.5 4.3e-11 43.2 3.5 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73668311|ref|YP_304326.1| - 1.6e-10 41.0 6.1 3.9e-10 39.7 6.1 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73668311|ref|YP_304326.1| - 8.6e-08 32.5 1.2 0.017 15.5 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668311|ref|YP_304326.1| - 3.2e-07 30.8 7.3 2.7e-06 27.9 7.5 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|73668311|ref|YP_304326.1| - 4e-07 29.8 8.0 0.00033 20.4 0.9 2.6 1 1 1 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 gi|73668311|ref|YP_304326.1| - 1.2e-06 28.6 7.9 0.0043 17.2 1.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73668311|ref|YP_304326.1| - 2.2e-06 27.7 10.8 5.8e-05 23.1 12.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73668311|ref|YP_304326.1| - 1.5e-05 25.1 10.4 0.0019 18.6 2.4 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|73668311|ref|YP_304326.1| - 0.00037 20.2 16.0 0.0027 17.5 2.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73668311|ref|YP_304326.1| - 0.00097 19.2 9.4 0.062 13.4 0.4 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73668311|ref|YP_304326.1| - 0.0012 18.8 14.8 0.02 15.0 2.2 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73668311|ref|YP_304326.1| - 0.0019 19.1 13.2 0.036 15.0 13.7 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 gi|73668311|ref|YP_304326.1| - 0.0024 18.7 0.9 1.2 10.0 0.1 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73668311|ref|YP_304326.1| - 0.0087 16.6 10.0 0.055 14.0 1.3 3.0 3 0 0 3 3 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_2 PF12797.7 gi|73668311|ref|YP_304326.1| - 0.018 15.1 14.0 0.3 11.3 2.9 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|73668311|ref|YP_304326.1| - 0.039 14.9 16.2 0.8 10.8 3.7 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Flavodoxin_4 PF12682.7 gi|73668312|ref|YP_304327.1| - 4.1e-22 78.6 0.1 7.6e-22 77.7 0.1 1.5 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 gi|73668312|ref|YP_304327.1| - 0.00032 20.4 0.0 0.36 10.5 0.0 2.3 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_2 PF02525.17 gi|73668312|ref|YP_304327.1| - 0.061 13.0 0.0 0.074 12.8 0.0 1.2 1 0 0 1 1 1 0 Flavodoxin-like fold TIP49 PF06068.13 gi|73668312|ref|YP_304327.1| - 0.13 11.5 0.0 0.2 10.8 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain ADH_N PF08240.12 gi|73668313|ref|YP_304328.1| - 6.7e-30 103.2 6.3 6.7e-30 103.2 6.3 1.8 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|73668313|ref|YP_304328.1| - 1.4e-13 51.0 0.0 2.6e-13 50.1 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|73668313|ref|YP_304328.1| - 0.0036 16.6 0.0 0.0063 15.8 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|73668313|ref|YP_304328.1| - 0.0098 15.3 0.0 0.018 14.4 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|73668313|ref|YP_304328.1| - 0.021 15.0 0.0 0.061 13.5 0.0 1.7 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Cupin_2 PF07883.11 gi|73668314|ref|YP_304329.1| - 1.4e-10 40.7 1.1 1.4e-10 40.7 1.1 1.7 3 0 0 3 3 3 1 Cupin domain AraC_binding PF02311.19 gi|73668314|ref|YP_304329.1| - 7.9e-07 29.1 0.7 1.2e-06 28.5 0.7 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 gi|73668314|ref|YP_304329.1| - 0.0011 18.6 0.0 0.0015 18.2 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.12 gi|73668314|ref|YP_304329.1| - 0.019 14.7 0.1 0.051 13.3 0.1 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF861) Cupin_7 PF12973.7 gi|73668314|ref|YP_304329.1| - 0.055 13.4 0.0 0.075 13.0 0.0 1.3 1 0 0 1 1 1 0 ChrR Cupin-like domain Lactamase_B_2 PF12706.7 gi|73668315|ref|YP_304330.1| - 3.3e-38 131.2 0.0 4.3e-38 130.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|73668315|ref|YP_304330.1| - 1e-11 45.0 0.0 1.7e-11 44.3 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|73668315|ref|YP_304330.1| - 0.024 14.7 3.4 0.12 12.4 3.4 2.1 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily ADH_zinc_N PF00107.26 gi|73668316|ref|YP_304331.1| - 2.6e-09 37.2 0.0 1.8e-06 27.9 0.0 2.3 2 0 0 2 2 2 2 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|73668316|ref|YP_304331.1| - 1.5e-05 24.6 0.1 0.00014 21.4 0.0 2.1 2 1 0 2 2 2 1 Glucose dehydrogenase C-terminus HI0933_like PF03486.14 gi|73668316|ref|YP_304331.1| - 3e-05 22.9 0.0 3.8e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|73668316|ref|YP_304331.1| - 0.0012 18.2 0.1 0.002 17.5 0.1 1.3 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_2 PF07992.14 gi|73668316|ref|YP_304331.1| - 0.014 14.7 0.0 0.02 14.1 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|73668316|ref|YP_304331.1| - 0.029 13.9 0.0 0.041 13.5 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Shikimate_DH PF01488.20 gi|73668316|ref|YP_304331.1| - 0.095 12.8 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.18 gi|73668316|ref|YP_304331.1| - 0.12 12.6 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_7 PF13241.6 gi|73668316|ref|YP_304331.1| - 0.13 12.8 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding FAD_binding_2 PF00890.24 gi|73668316|ref|YP_304331.1| - 0.13 11.3 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain FAD_binding_3 PF01494.19 gi|73668316|ref|YP_304331.1| - 0.23 10.6 0.1 0.35 10.1 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain ADH_N PF08240.12 gi|73668317|ref|YP_304332.1| - 1.5e-22 79.5 1.0 2e-22 79.1 1.0 1.1 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.6 gi|73668317|ref|YP_304332.1| - 2.4e-09 36.9 1.8 2.4e-09 36.9 1.8 1.8 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-associated Cupin_2 PF07883.11 gi|73668318|ref|YP_304333.1| - 1.4e-10 40.7 2.7 3.6e-10 39.4 2.6 1.9 2 1 0 2 2 2 1 Cupin domain AraC_binding PF02311.19 gi|73668318|ref|YP_304333.1| - 4e-07 30.0 0.5 5e-07 29.7 0.5 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 gi|73668318|ref|YP_304333.1| - 0.02 14.5 0.1 0.025 14.2 0.1 1.2 1 0 0 1 1 1 0 Cupin adh_short_C2 PF13561.6 gi|73668319|ref|YP_304334.1| - 3.4e-73 246.1 0.4 4.1e-73 245.8 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|73668319|ref|YP_304334.1| - 1.2e-59 201.0 1.4 1.5e-59 200.8 1.4 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|73668319|ref|YP_304334.1| - 1.9e-13 50.7 0.2 2.7e-13 50.2 0.2 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|73668319|ref|YP_304334.1| - 0.00017 21.2 0.1 0.00021 20.8 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Hexapep PF00132.24 gi|73668320|ref|YP_304335.1| - 0.00074 19.2 3.3 1.3 8.8 0.3 3.3 2 2 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73668320|ref|YP_304335.1| - 0.024 14.4 0.4 2.5 7.9 0.4 3.0 2 1 1 3 3 3 0 Hexapeptide repeat of succinyl-transferase Aldo_ket_red PF00248.21 gi|73668321|ref|YP_304336.1| - 5.5e-20 71.8 0.0 7.4e-16 58.2 0.0 2.2 1 1 1 2 2 2 2 Aldo/keto reductase family Fer4_17 PF13534.6 gi|73668321|ref|YP_304336.1| - 1e-08 35.6 6.4 2.5e-08 34.3 6.4 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73668321|ref|YP_304336.1| - 4.8e-06 26.8 11.1 0.00013 22.1 1.0 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73668321|ref|YP_304336.1| - 1.5e-05 25.1 6.2 3.6e-05 23.8 6.2 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668321|ref|YP_304336.1| - 7e-05 23.3 3.8 0.0049 17.4 0.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73668321|ref|YP_304336.1| - 0.0005 20.1 9.5 0.0046 17.1 10.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73668321|ref|YP_304336.1| - 0.00069 20.0 21.7 0.0063 16.9 2.7 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73668321|ref|YP_304336.1| - 0.00085 19.0 9.0 0.001 18.8 2.2 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.6 gi|73668321|ref|YP_304336.1| - 0.018 14.8 7.5 0.045 13.5 0.9 2.4 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_4 PF12800.7 gi|73668321|ref|YP_304336.1| - 0.021 15.3 1.7 0.021 15.3 1.7 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73668321|ref|YP_304336.1| - 0.05 13.7 2.5 0.05 13.7 2.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73668321|ref|YP_304336.1| - 0.62 11.0 11.1 24 5.9 12.2 2.5 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|73668321|ref|YP_304336.1| - 1.5 9.0 12.5 11 6.3 12.5 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain DUF4405 PF14358.6 gi|73668322|ref|YP_304337.1| - 6.1e-11 42.7 12.7 6.1e-11 42.7 12.7 3.3 2 1 1 3 3 3 2 Domain of unknown function (DUF4405) Ni_hydr_CYTB PF01292.20 gi|73668322|ref|YP_304337.1| - 0.053 13.1 21.5 0.015 14.9 16.8 2.3 2 1 0 2 2 2 0 Prokaryotic cytochrome b561 Ank PF00023.30 gi|73668322|ref|YP_304337.1| - 0.17 12.4 0.3 0.44 11.1 0.3 1.7 1 0 0 1 1 1 0 Ankyrin repeat Flavodoxin_4 PF12682.7 gi|73668323|ref|YP_304338.1| - 7.1e-25 87.5 0.0 9.4e-25 87.1 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 gi|73668323|ref|YP_304338.1| - 1.7e-07 31.1 0.7 0.00048 19.9 0.0 2.5 2 1 1 3 3 3 2 Flavodoxin domain Flavodoxin_5 PF12724.7 gi|73668323|ref|YP_304338.1| - 0.00012 22.3 0.0 0.0018 18.6 0.0 2.2 1 1 1 2 2 2 1 Flavodoxin domain FMN_red PF03358.15 gi|73668323|ref|YP_304338.1| - 0.00068 19.4 0.0 0.00096 18.9 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73668323|ref|YP_304338.1| - 0.00088 19.0 0.0 0.0012 18.6 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_1 PF00258.25 gi|73668323|ref|YP_304338.1| - 0.0024 18.1 0.0 0.01 16.1 0.0 1.9 1 1 1 2 2 2 1 Flavodoxin DUF4354 PF14263.6 gi|73668323|ref|YP_304338.1| - 0.085 12.7 0.1 1.1 9.0 0.0 2.5 2 1 0 3 3 3 0 Domain of unknown function (DUF4354) MFS_1 PF07690.16 gi|73668324|ref|YP_304339.1| - 1.2e-43 149.4 46.6 1.2e-43 149.4 46.6 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily OATP PF03137.20 gi|73668324|ref|YP_304339.1| - 6.1 5.0 10.9 1.5 7.0 1.2 2.9 2 1 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family Glyco_hydro_108 PF05838.12 gi|73668325|ref|YP_304340.1| - 0.17 12.3 0.0 0.23 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase 108 Fe-ADH PF00465.19 gi|73668326|ref|YP_304341.1| - 2e-90 303.3 0.4 2.2e-90 303.1 0.4 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|73668326|ref|YP_304341.1| - 6.1e-15 55.6 1.0 6.1e-07 29.4 0.1 2.0 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase ArsP_1 PF03773.13 gi|73668327|ref|YP_304342.1| - 4e-36 124.7 12.5 5.1e-36 124.3 12.5 1.1 1 0 0 1 1 1 1 Predicted permease DUF362 PF04015.12 gi|73668328|ref|YP_304343.1| - 6.4e-35 121.2 0.1 9.7e-35 120.6 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Lar_N PF09861.9 gi|73668328|ref|YP_304343.1| - 0.0013 17.9 0.6 0.0026 17.0 0.6 1.4 1 0 0 1 1 1 1 Lactate racemase N-terminal domain TetR_N PF00440.23 gi|73668329|ref|YP_304344.1| - 5.1e-18 64.6 0.0 8.6e-18 63.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_10 PF16295.5 gi|73668329|ref|YP_304344.1| - 1.7e-08 34.8 0.1 2.3e-08 34.4 0.1 1.2 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 gi|73668329|ref|YP_304344.1| - 0.012 15.8 0.0 0.18 11.9 0.0 2.5 1 1 1 2 2 2 0 Helix-turn-helix of insertion element transposase AA_kinase PF00696.28 gi|73668330|ref|YP_304345.1| - 9.3e-26 90.9 1.0 2.7e-25 89.3 1.0 1.7 1 1 0 1 1 1 1 Amino acid kinase family MacB_PCD PF12704.7 gi|73668332|ref|YP_304347.1| - 1.6e-22 80.8 0.4 1.6e-22 80.8 0.4 2.3 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|73668332|ref|YP_304347.1| - 5.5e-15 55.6 6.4 5.5e-15 55.6 6.4 3.3 4 0 0 4 4 4 1 FtsX-like permease family DUF2613 PF11021.8 gi|73668332|ref|YP_304347.1| - 0.039 14.1 5.5 0.19 11.9 0.1 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) DUF4849 PF16141.5 gi|73668332|ref|YP_304347.1| - 0.14 11.4 0.0 0.21 10.8 0.0 1.1 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 ABC_tran PF00005.27 gi|73668333|ref|YP_304348.1| - 6.7e-34 117.3 0.0 9.4e-34 116.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|73668333|ref|YP_304348.1| - 3.3e-08 33.3 0.0 4.9e-05 22.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73668333|ref|YP_304348.1| - 1.1e-07 32.0 0.4 0.0018 18.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|73668333|ref|YP_304348.1| - 1.3e-05 25.6 0.4 3.1e-05 24.4 0.4 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|73668333|ref|YP_304348.1| - 0.00024 20.8 0.1 0.0004 20.1 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain NB-ARC PF00931.22 gi|73668333|ref|YP_304348.1| - 0.0017 17.6 0.3 1.1 8.4 0.2 2.0 2 0 0 2 2 2 2 NB-ARC domain AAA_22 PF13401.6 gi|73668333|ref|YP_304348.1| - 0.0049 17.1 0.3 0.012 15.9 0.3 1.9 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|73668333|ref|YP_304348.1| - 0.0058 16.8 0.5 0.053 13.7 0.5 2.2 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|73668333|ref|YP_304348.1| - 0.0066 16.4 0.0 0.012 15.6 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 gi|73668333|ref|YP_304348.1| - 0.011 15.5 0.2 0.051 13.3 0.1 1.8 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|73668333|ref|YP_304348.1| - 0.018 14.8 0.1 0.21 11.3 0.1 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_25 PF13481.6 gi|73668333|ref|YP_304348.1| - 0.037 13.6 0.2 0.16 11.6 0.3 1.8 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|73668333|ref|YP_304348.1| - 0.042 13.8 0.1 0.093 12.6 0.1 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_23 PF13476.6 gi|73668333|ref|YP_304348.1| - 0.043 14.3 1.1 0.074 13.6 0.3 1.7 2 1 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|73668333|ref|YP_304348.1| - 0.045 13.1 0.6 2.7 7.3 0.0 2.2 2 0 0 2 2 2 0 KaiC AAA_15 PF13175.6 gi|73668333|ref|YP_304348.1| - 0.057 13.1 0.0 4.8 6.8 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 gi|73668333|ref|YP_304348.1| - 0.06 13.9 0.5 0.46 11.0 0.5 2.4 1 1 0 1 1 1 0 AAA domain Trm5_N PF18093.1 gi|73668333|ref|YP_304348.1| - 0.08 12.8 0.4 0.21 11.5 0.4 1.7 1 0 0 1 1 1 0 tRNA methyltransferase 5 N-terminal domain AAA_PrkA PF08298.11 gi|73668333|ref|YP_304348.1| - 0.092 11.6 0.0 0.14 11.0 0.0 1.3 1 0 0 1 1 1 0 PrkA AAA domain T2SSE PF00437.20 gi|73668333|ref|YP_304348.1| - 0.12 11.4 0.2 0.19 10.8 0.2 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 gi|73668333|ref|YP_304348.1| - 0.12 12.3 0.4 0.29 11.0 0.2 1.8 1 1 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 gi|73668333|ref|YP_304348.1| - 0.13 11.9 0.4 0.34 10.6 0.2 1.7 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|73668333|ref|YP_304348.1| - 0.19 12.0 0.1 3.5 7.9 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Acetyltransf_1 PF00583.25 gi|73668334|ref|YP_304349.1| - 4.8e-15 55.8 0.0 5.3e-15 55.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|73668334|ref|YP_304349.1| - 5.6e-12 45.7 0.1 7.7e-12 45.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73668334|ref|YP_304349.1| - 1.3e-11 44.7 0.1 1.7e-11 44.4 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73668334|ref|YP_304349.1| - 2.4e-05 24.2 0.0 3.6e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 gi|73668334|ref|YP_304349.1| - 4.3e-05 23.5 0.0 6.9e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 gi|73668334|ref|YP_304349.1| - 0.00027 21.6 0.1 0.0003 21.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|73668334|ref|YP_304349.1| - 0.00063 19.3 0.4 0.00071 19.1 0.4 1.2 1 0 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_4 PF13420.7 gi|73668334|ref|YP_304349.1| - 0.0037 17.4 0.5 0.0052 16.9 0.5 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73668334|ref|YP_304349.1| - 0.0041 17.2 0.0 0.0079 16.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 gi|73668334|ref|YP_304349.1| - 0.0054 16.4 0.0 0.0086 15.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 gi|73668334|ref|YP_304349.1| - 0.021 14.8 0.0 0.041 13.9 0.0 1.5 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase DUF2264 PF10022.9 gi|73668334|ref|YP_304349.1| - 0.074 12.1 0.0 0.77 8.8 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2264) Acetyltransf_8 PF13523.6 gi|73668334|ref|YP_304349.1| - 0.12 12.1 0.0 0.34 10.6 0.0 1.6 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain IF-2B PF01008.17 gi|73668335|ref|YP_304350.1| - 8.3e-83 277.8 1.9 9.5e-83 277.6 1.9 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family DUF1724 PF08350.10 gi|73668336|ref|YP_304351.1| - 2.1e-23 82.2 0.1 4.4e-23 81.2 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|73668336|ref|YP_304351.1| - 0.00012 21.9 0.2 0.00021 21.1 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|73668336|ref|YP_304351.1| - 0.008 16.1 0.1 0.032 14.2 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_11 PF08279.12 gi|73668336|ref|YP_304351.1| - 0.18 11.7 0.1 0.39 10.7 0.1 1.6 1 0 0 1 1 1 0 HTH domain FmdE PF02663.14 gi|73668337|ref|YP_304352.1| - 1e-41 142.1 0.0 1.2e-41 141.8 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.17 gi|73668337|ref|YP_304352.1| - 5.5e-08 32.6 1.1 1.1e-07 31.6 1.1 1.6 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger TrmO PF01980.16 gi|73668338|ref|YP_304353.1| - 4e-31 107.7 0.0 5.1e-31 107.4 0.0 1.1 1 0 0 1 1 1 1 tRNA-methyltransferase O CobN-Mg_chel PF02514.16 gi|73668339|ref|YP_304354.1| - 1.1e-302 1006.9 0.0 1.3e-302 1006.6 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase SMI1_KNR4 PF09346.10 gi|73668339|ref|YP_304354.1| - 0.062 13.7 1.3 0.2 12.0 0.1 2.6 3 0 0 3 3 3 0 SMI1 / KNR4 family (SUKH-1) DUF1638 PF07796.11 gi|73668340|ref|YP_304355.1| - 6.4e-34 117.4 0.0 7.9e-34 117.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) PGM_PMM_II PF02879.16 gi|73668340|ref|YP_304355.1| - 0.085 13.5 0.0 1.6 9.4 0.0 2.7 2 1 1 3 3 3 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DDE_Tnp_1 PF01609.21 gi|73668341|ref|YP_304356.1| - 5.1e-22 78.6 1.1 6.9e-22 78.1 1.1 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73668341|ref|YP_304356.1| - 0.0074 16.0 0.2 0.27 10.9 0.2 2.3 1 1 0 1 1 1 1 DDE superfamily endonuclease NKWYS PF10364.9 gi|73668341|ref|YP_304356.1| - 0.019 15.1 1.4 1.2 9.3 0.4 2.5 2 0 0 2 2 2 0 Putative capsular polysaccharide synthesis protein Peptidase_S41 PF03572.18 gi|73668341|ref|YP_304356.1| - 0.15 11.6 0.0 0.33 10.5 0.0 1.6 2 0 0 2 2 2 0 Peptidase family S41 DUF2149 PF09919.9 gi|73668342|ref|YP_304357.1| - 5.2e-32 110.0 0.2 7.2e-32 109.5 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) VirionAssem_T7 PF11653.8 gi|73668342|ref|YP_304357.1| - 0.071 13.6 0.5 0.099 13.2 0.5 1.2 1 0 0 1 1 1 0 Bacteriophage T7 virion assembly protein MotA_ExbB PF01618.16 gi|73668343|ref|YP_304358.1| - 1.6e-11 44.1 0.1 2.9e-11 43.2 0.1 1.5 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family VIT1 PF01988.19 gi|73668343|ref|YP_304358.1| - 0.00024 21.1 0.0 0.00033 20.6 0.0 1.3 1 0 0 1 1 1 1 VIT family Spore_III_AE PF09546.10 gi|73668343|ref|YP_304358.1| - 0.92 8.7 6.8 5.2 6.2 0.4 2.1 2 0 0 2 2 2 0 Stage III sporulation protein AE (spore_III_AE) DUF2162 PF09930.9 gi|73668344|ref|YP_304359.1| - 2.7e-67 226.5 22.5 3e-67 226.3 22.5 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) DUF1686 PF07937.11 gi|73668344|ref|YP_304359.1| - 0.06 13.2 0.3 0.06 13.2 0.3 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1686) DUF3180 PF11377.8 gi|73668344|ref|YP_304359.1| - 0.5 10.5 8.3 0.45 10.6 0.3 3.6 2 2 1 3 3 3 0 Protein of unknown function (DUF3180) Abhydrolase_9_N PF15420.6 gi|73668344|ref|YP_304359.1| - 2.2 8.2 8.2 0.23 11.4 0.9 2.3 2 1 1 3 3 3 0 Alpha/beta-hydrolase family N-terminus HTH_20 PF12840.7 gi|73668345|ref|YP_304360.1| - 1.3e-09 38.0 0.1 3.3e-09 36.7 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|73668345|ref|YP_304360.1| - 2.3e-09 37.0 0.2 4.5e-09 36.0 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|73668345|ref|YP_304360.1| - 1e-05 25.0 0.1 1.7e-05 24.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|73668345|ref|YP_304360.1| - 1.8e-05 24.5 0.0 4e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|73668345|ref|YP_304360.1| - 0.00095 19.0 0.0 0.0016 18.3 0.0 1.3 1 0 0 1 1 1 1 MarR family DUF4430 PF14478.6 gi|73668345|ref|YP_304360.1| - 0.0018 18.9 1.0 0.0075 16.8 1.0 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4430) DUF4423 PF14394.6 gi|73668345|ref|YP_304360.1| - 0.0068 16.1 0.2 0.015 15.0 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4423) HxlR PF01638.17 gi|73668345|ref|YP_304360.1| - 0.014 15.3 0.0 0.031 14.1 0.0 1.6 1 0 0 1 1 1 0 HxlR-like helix-turn-helix ArsR PF09824.9 gi|73668345|ref|YP_304360.1| - 0.031 13.9 0.0 0.069 12.7 0.0 1.4 1 1 0 1 1 1 0 ArsR transcriptional regulator Rrf2 PF02082.20 gi|73668345|ref|YP_304360.1| - 0.067 13.5 0.0 0.18 12.2 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator TrmB PF01978.19 gi|73668345|ref|YP_304360.1| - 0.074 12.9 0.0 0.28 11.1 0.0 2.0 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB Fibrillarin PF01269.17 gi|73668346|ref|YP_304361.1| - 5.8e-89 297.1 0.0 6.9e-89 296.8 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.6 gi|73668346|ref|YP_304361.1| - 0.061 14.0 0.0 0.12 13.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DREV PF05219.12 gi|73668346|ref|YP_304361.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase Nop PF01798.18 gi|73668347|ref|YP_304362.1| - 4.5e-52 176.8 0.0 1e-51 175.6 0.0 1.5 1 1 0 1 1 1 1 snoRNA binding domain, fibrillarin GHMP_kinases_N PF00288.26 gi|73668348|ref|YP_304363.1| - 1.1e-07 32.0 1.1 2.2e-07 31.0 1.1 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|73668348|ref|YP_304363.1| - 0.00011 22.5 0.0 0.00022 21.5 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal 40S_S4_C PF16121.5 gi|73668348|ref|YP_304363.1| - 0.05 13.2 2.0 0.17 11.5 0.4 2.5 2 1 0 2 2 2 0 40S ribosomal protein S4 C-terminus rRNA_proc-arch PF13234.6 gi|73668348|ref|YP_304363.1| - 0.23 11.4 0.0 0.33 10.8 0.0 1.2 1 0 0 1 1 1 0 rRNA-processing arch domain DUF2953 PF11167.8 gi|73668349|ref|YP_304364.1| - 4.9e-15 55.3 0.0 1.1e-14 54.2 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2953) Presenilin PF01080.17 gi|73668349|ref|YP_304364.1| - 0.0013 17.6 0.2 0.0016 17.3 0.2 1.2 1 0 0 1 1 1 1 Presenilin Mem_trans PF03547.18 gi|73668349|ref|YP_304364.1| - 0.77 8.1 2.8 0.93 7.8 2.8 1.4 1 1 0 1 1 1 0 Membrane transport protein RR_TM4-6 PF06459.12 gi|73668349|ref|YP_304364.1| - 1.5 8.6 13.6 2.7 7.7 13.6 1.5 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CCDC71L PF15374.6 gi|73668349|ref|YP_304364.1| - 6 6.0 12.2 7.9 5.6 12.2 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 71L RNA_pol_Rbc25 PF08292.12 gi|73668349|ref|YP_304364.1| - 6.3 7.0 8.9 15 5.8 8.9 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit Rpc25 Spore_YtfJ PF09579.10 gi|73668350|ref|YP_304365.1| - 2.3e-22 78.9 1.1 3.9e-22 78.2 1.1 1.3 1 0 0 1 1 1 1 Sporulation protein YtfJ (Spore_YtfJ) PKD PF00801.20 gi|73668351|ref|YP_304366.1| - 2.3e-75 248.4 30.2 2.1e-15 56.3 4.4 5.5 5 0 0 5 5 5 5 PKD domain NosD PF05048.13 gi|73668351|ref|YP_304366.1| - 2.7e-52 177.5 29.0 6.4e-52 176.2 29.0 1.6 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73668351|ref|YP_304366.1| - 1.5e-17 63.9 29.2 1.5e-17 63.9 29.2 2.4 1 1 0 1 1 1 1 Right handed beta helix region ChitinaseA_N PF08329.10 gi|73668351|ref|YP_304366.1| - 1.5e-09 37.6 10.1 0.31 10.7 0.0 5.5 4 1 1 5 5 5 4 Chitinase A, N-terminal domain MG2 PF01835.19 gi|73668351|ref|YP_304366.1| - 2.8e-07 30.9 16.2 0.34 11.4 0.4 5.4 1 1 3 5 5 5 3 MG2 domain CNRIP1 PF15043.6 gi|73668351|ref|YP_304366.1| - 8.8e-07 28.6 7.2 0.44 10.1 0.1 4.5 4 0 0 4 4 4 3 CB1 cannabinoid receptor-interacting protein 1 DUF5513 PF17632.2 gi|73668351|ref|YP_304366.1| - 4.5e-06 27.0 0.5 9.2 6.8 0.0 4.6 5 0 0 5 5 4 0 Family of unknown function (DUF5513) PKD_3 PF16820.5 gi|73668351|ref|YP_304366.1| - 2.9e-05 23.7 11.1 0.57 10.0 0.3 5.4 5 0 0 5 5 5 2 PKD-like domain ribosomal_L24 PF17136.4 gi|73668351|ref|YP_304366.1| - 0.00051 20.4 0.9 83 3.7 0.0 4.8 5 0 0 5 5 4 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 DUF4625 PF15418.6 gi|73668351|ref|YP_304366.1| - 0.0069 16.6 5.1 44 4.3 0.0 5.1 5 0 0 5 5 5 0 Domain of unknown function (DUF4625) DUF2045 PF09741.9 gi|73668351|ref|YP_304366.1| - 0.031 13.7 4.1 2.8 7.3 0.2 2.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2045) DUF807 PF05660.11 gi|73668351|ref|YP_304366.1| - 0.049 13.6 12.6 1.5 8.8 0.5 4.7 2 2 2 4 4 4 0 Coxiella burnetii protein of unknown function (DUF807) Arylesterase PF01731.20 gi|73668351|ref|YP_304366.1| - 0.094 12.9 7.6 8.2 6.7 0.1 4.1 4 0 0 4 4 4 0 Arylesterase DUF5011 PF16403.5 gi|73668351|ref|YP_304366.1| - 0.1 12.7 41.4 1.6 8.9 1.0 6.7 7 0 0 7 7 7 0 Domain of unknown function (DUF5011) RnfC_N PF13375.6 gi|73668351|ref|YP_304366.1| - 0.32 11.0 1.6 9.6 6.2 0.1 3.7 3 1 0 3 3 3 0 RnfC Barrel sandwich hybrid domain FeThRed_A PF02941.15 gi|73668351|ref|YP_304366.1| - 0.43 10.8 1.4 39 4.5 0.0 4.1 5 1 1 6 6 5 0 Ferredoxin thioredoxin reductase variable alpha chain Y_Y_Y PF07495.13 gi|73668351|ref|YP_304366.1| - 1.7 8.7 18.4 12 6.0 0.2 6.0 6 0 0 6 6 6 0 Y_Y_Y domain Cadherin PF00028.17 gi|73668351|ref|YP_304366.1| - 1.9 9.0 7.3 90 3.6 0.0 4.8 4 0 0 4 4 4 0 Cadherin domain He_PIG PF05345.12 gi|73668351|ref|YP_304366.1| - 3.4 7.9 32.8 26 5.1 1.5 8.1 7 0 0 7 7 7 0 Putative Ig domain SoxZ PF08770.11 gi|73668351|ref|YP_304366.1| - 6.4 6.6 13.0 33 4.3 0.1 5.4 6 0 0 6 6 6 0 Sulphur oxidation protein SoxZ PKD PF00801.20 gi|73668352|ref|YP_304367.1| - 4.7e-148 481.3 63.5 1e-16 60.5 0.5 9.8 9 0 0 9 9 9 9 PKD domain PKD_3 PF16820.5 gi|73668352|ref|YP_304367.1| - 6.8e-24 83.4 35.0 0.059 13.1 0.2 9.6 9 0 0 9 9 9 9 PKD-like domain Lactonase PF10282.9 gi|73668352|ref|YP_304367.1| - 1.5e-18 67.2 7.0 9.3e-05 21.8 0.1 4.7 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller ChitinaseA_N PF08329.10 gi|73668352|ref|YP_304367.1| - 6.9e-16 58.1 34.5 0.082 12.6 0.1 9.9 9 1 0 10 10 10 6 Chitinase A, N-terminal domain MG2 PF01835.19 gi|73668352|ref|YP_304367.1| - 1.7e-15 57.3 41.0 0.71 10.4 0.2 9.8 2 1 6 9 9 9 9 MG2 domain SGL PF08450.12 gi|73668352|ref|YP_304367.1| - 5e-10 39.4 12.7 9.8e-05 22.1 2.0 4.6 2 1 1 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|73668352|ref|YP_304367.1| - 1.3e-07 31.3 10.7 0.072 13.2 0.0 5.7 6 0 0 6 6 5 2 NHL repeat DUF4625 PF15418.6 gi|73668352|ref|YP_304367.1| - 2.3e-07 31.1 12.1 30 4.9 0.0 9.0 9 0 0 9 9 9 0 Domain of unknown function (DUF4625) Cytochrom_D1 PF02239.16 gi|73668352|ref|YP_304367.1| - 1.2e-06 27.3 5.4 0.00026 19.7 5.4 3.5 1 1 0 1 1 1 1 Cytochrome D1 heme domain ribosomal_L24 PF17136.4 gi|73668352|ref|YP_304367.1| - 7.4e-05 23.1 15.6 38 4.8 0.1 8.0 7 0 0 7 7 7 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 GbpA_2 PF18416.1 gi|73668352|ref|YP_304367.1| - 0.0005 20.3 9.1 75 3.7 0.1 7.6 6 0 0 6 6 6 0 N-acetylglucosamine binding protein domain 2 FeThRed_A PF02941.15 gi|73668352|ref|YP_304367.1| - 0.00078 19.5 1.6 12 6.1 0.0 4.9 4 0 0 4 4 3 0 Ferredoxin thioredoxin reductase variable alpha chain DUF5011 PF16403.5 gi|73668352|ref|YP_304367.1| - 0.0033 17.5 71.1 0.98 9.6 0.8 10.8 11 0 0 11 11 10 6 Domain of unknown function (DUF5011) MATH PF00917.26 gi|73668352|ref|YP_304367.1| - 0.01 16.0 0.1 1e+02 3.1 0.0 6.4 6 2 1 7 7 7 0 MATH domain MetallophosC PF16370.5 gi|73668352|ref|YP_304367.1| - 0.03 14.6 25.3 20 5.4 0.2 8.0 7 0 0 7 7 7 0 C terminal of Calcineurin-like phosphoesterase DUF3324 PF11797.8 gi|73668352|ref|YP_304367.1| - 0.043 13.8 38.0 16 5.5 0.1 9.5 9 0 0 9 9 9 0 Protein of unknown function C-terminal (DUF3324) DUF1513 PF07433.11 gi|73668352|ref|YP_304367.1| - 0.044 12.9 6.3 1.4 7.9 0.5 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF1513) DUF4915 PF16261.5 gi|73668352|ref|YP_304367.1| - 0.073 12.3 0.1 11 5.1 0.0 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4915) Peptidase_C80 PF11713.8 gi|73668352|ref|YP_304367.1| - 0.13 12.5 0.4 37 4.5 0.0 3.7 2 1 1 3 3 3 0 Peptidase C80 family DUF1905 PF08922.11 gi|73668352|ref|YP_304367.1| - 0.33 11.1 8.1 15 5.7 0.2 4.8 3 1 2 5 5 5 0 Domain of unknown function (DUF1905) DUF2381 PF09544.10 gi|73668352|ref|YP_304367.1| - 1.8 8.0 8.5 1.8e+02 1.4 0.0 5.8 4 2 1 6 6 6 0 Protein of unknown function (DUF2381) Big_4 PF07532.11 gi|73668352|ref|YP_304367.1| - 3 7.6 53.5 17 5.2 0.2 11.2 11 1 0 11 11 10 0 Bacterial Ig-like domain (group 4) Zn_ribbon_SprT PF17283.2 gi|73668354|ref|YP_304369.1| - 0.0016 18.3 1.0 0.29 11.1 0.0 2.2 2 0 0 2 2 2 1 SprT-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|73668354|ref|YP_304369.1| - 0.0017 18.5 0.6 0.0033 17.5 0.6 1.4 1 1 0 1 1 1 1 Zinc ribbon domain Trep_Strep PF09605.10 gi|73668354|ref|YP_304369.1| - 0.0023 18.0 3.5 0.0025 17.8 3.5 1.1 1 0 0 1 1 1 1 Hypothetical bacterial integral membrane protein (Trep_Strep) zf_UBZ PF18439.1 gi|73668354|ref|YP_304369.1| - 0.0043 16.6 0.2 3.1 7.5 0.0 2.3 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zinc_ribbon_15 PF17032.5 gi|73668354|ref|YP_304369.1| - 0.0064 17.2 0.0 0.013 16.2 0.0 1.5 2 0 0 2 2 1 1 zinc-ribbon family Zn_Tnp_IS1595 PF12760.7 gi|73668354|ref|YP_304369.1| - 0.011 15.7 2.2 0.22 11.5 2.8 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-CSL PF05207.13 gi|73668354|ref|YP_304369.1| - 0.012 15.3 0.7 0.094 12.4 0.9 2.0 1 1 1 2 2 2 0 CSL zinc finger SecG PF03840.14 gi|73668354|ref|YP_304369.1| - 0.015 15.3 2.2 0.24 11.5 0.0 2.1 2 0 0 2 2 2 0 Preprotein translocase SecG subunit Ribosomal_L37e PF01907.19 gi|73668354|ref|YP_304369.1| - 0.018 15.2 0.2 0.066 13.4 0.0 1.8 2 0 0 2 2 2 0 Ribosomal protein L37e zf-ISL3 PF14690.6 gi|73668354|ref|YP_304369.1| - 0.022 15.4 0.5 2.4 8.9 0.1 2.3 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-H2C2_2 PF13465.6 gi|73668354|ref|YP_304369.1| - 0.032 14.7 1.4 6.9 7.3 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger double domain zf-Di19 PF05605.12 gi|73668354|ref|YP_304369.1| - 0.037 14.3 0.0 0.057 13.7 0.0 1.3 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding OrfB_Zn_ribbon PF07282.11 gi|73668354|ref|YP_304369.1| - 0.049 13.6 0.3 0.099 12.6 0.3 1.5 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_4 PF13717.6 gi|73668354|ref|YP_304369.1| - 0.055 13.4 2.4 0.55 10.2 2.4 2.1 1 1 0 1 1 1 0 zinc-ribbon domain DUF3797 PF12677.7 gi|73668354|ref|YP_304369.1| - 0.065 13.1 0.8 0.63 10.0 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) zf-ribbon_3 PF13248.6 gi|73668354|ref|YP_304369.1| - 0.068 12.6 2.3 2.1 7.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Ogr_Delta PF04606.12 gi|73668354|ref|YP_304369.1| - 0.074 13.1 0.1 4.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-C2H2 PF00096.26 gi|73668354|ref|YP_304369.1| - 0.075 13.5 2.4 1.6 9.4 0.1 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zinc_ribbon_5 PF13719.6 gi|73668354|ref|YP_304369.1| - 0.084 12.6 1.9 0.5 10.2 1.9 2.0 1 1 0 1 1 1 0 zinc-ribbon domain DZR PF12773.7 gi|73668354|ref|YP_304369.1| - 0.088 12.8 0.2 0.2 11.7 0.2 1.5 1 1 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 gi|73668354|ref|YP_304369.1| - 0.09 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-LITAF-like PF10601.9 gi|73668354|ref|YP_304369.1| - 0.097 12.9 4.4 4.9 7.5 2.3 2.5 2 1 0 2 2 2 0 LITAF-like zinc ribbon domain zf-C2H2_4 PF13894.6 gi|73668354|ref|YP_304369.1| - 0.11 13.5 0.9 6 8.0 0.1 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger DUF4337 PF14235.6 gi|73668354|ref|YP_304369.1| - 0.21 11.7 1.8 0.28 11.3 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) CpXC PF14353.6 gi|73668354|ref|YP_304369.1| - 0.25 11.4 0.8 21 5.2 0.9 2.1 1 1 1 2 2 2 0 CpXC protein zf-ACC PF17848.1 gi|73668354|ref|YP_304369.1| - 0.29 11.3 1.9 8.7 6.5 0.1 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Nudix_N_2 PF14803.6 gi|73668354|ref|YP_304369.1| - 0.31 11.0 3.2 6.1 6.8 3.5 2.1 1 1 0 1 1 1 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|73668354|ref|YP_304369.1| - 0.31 10.8 5.1 2.3 8.1 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Corona_S2 PF01601.16 gi|73668354|ref|YP_304369.1| - 0.35 9.3 1.6 0.38 9.2 1.6 1.2 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein DUF2207 PF09972.9 gi|73668354|ref|YP_304369.1| - 0.39 9.4 2.2 0.42 9.3 2.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-CCHC_5 PF14787.6 gi|73668354|ref|YP_304369.1| - 1.1 9.1 7.0 0.32 10.7 1.7 2.2 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger TF_Zn_Ribbon PF08271.12 gi|73668354|ref|YP_304369.1| - 1.3 8.6 6.1 4.3 6.9 0.6 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding DUF4191 PF13829.6 gi|73668354|ref|YP_304369.1| - 1.9 7.8 3.5 2.3 7.5 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF1610 PF07754.11 gi|73668354|ref|YP_304369.1| - 2.2 8.3 7.9 6.2 6.9 1.5 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) MFS_1 PF07690.16 gi|73668355|ref|YP_304370.1| - 3e-43 148.1 32.1 3e-43 148.1 32.1 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|73668355|ref|YP_304370.1| - 2.4e-13 49.7 17.7 3.5e-13 49.2 17.7 1.1 1 0 0 1 1 1 1 MFS_1 like family Mem_trans PF03547.18 gi|73668355|ref|YP_304370.1| - 4.2 5.6 12.1 0.093 11.1 4.1 2.2 2 1 0 2 2 2 0 Membrane transport protein Trp_oprn_chp PF09534.10 gi|73668355|ref|YP_304370.1| - 8.5 6.1 5.4 31 4.3 0.0 2.7 3 0 0 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Catalase PF00199.19 gi|73668356|ref|YP_304371.1| - 1.2e-199 663.2 0.1 1.5e-199 662.9 0.1 1.0 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 gi|73668356|ref|YP_304371.1| - 6.3e-21 74.4 0.1 1.5e-20 73.1 0.1 1.7 1 0 0 1 1 1 1 Catalase-related immune-responsive HisKA_2 PF07568.12 gi|73668357|ref|YP_304372.1| - 5.2e-32 109.8 1.2 5.2e-32 109.8 1.2 3.0 2 0 0 2 2 2 1 Histidine kinase GAF_2 PF13185.6 gi|73668357|ref|YP_304372.1| - 4.9e-29 101.4 0.1 2e-12 47.6 0.0 3.3 3 0 0 3 3 3 2 GAF domain PAS_3 PF08447.12 gi|73668357|ref|YP_304372.1| - 3.5e-20 72.1 0.0 3.6e-18 65.6 0.0 2.9 3 0 0 3 3 2 1 PAS fold PAS_4 PF08448.10 gi|73668357|ref|YP_304372.1| - 1.1e-17 64.3 0.0 1.4e-12 47.9 0.0 2.8 3 0 0 3 3 3 2 PAS fold GAF PF01590.26 gi|73668357|ref|YP_304372.1| - 4.4e-17 63.0 0.0 7.6e-07 29.8 0.0 3.0 3 0 0 3 3 3 2 GAF domain GAF_3 PF13492.6 gi|73668357|ref|YP_304372.1| - 8e-12 45.6 0.1 5.1e-06 26.9 0.0 2.8 3 0 0 3 3 2 2 GAF domain PAS_9 PF13426.7 gi|73668357|ref|YP_304372.1| - 1.7e-10 41.1 2.3 1.3e-05 25.4 0.0 4.4 5 0 0 5 5 4 2 PAS domain HATPase_c PF02518.26 gi|73668357|ref|YP_304372.1| - 5.5e-10 39.7 0.9 5e-09 36.7 0.4 2.8 3 1 0 3 3 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|73668357|ref|YP_304372.1| - 1.3e-05 25.1 0.0 3.7e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|73668357|ref|YP_304372.1| - 0.00045 20.9 0.4 0.00045 20.9 0.4 4.2 6 0 0 6 6 4 1 HWE histidine kinase PAS PF00989.25 gi|73668357|ref|YP_304372.1| - 0.0019 18.2 0.0 0.19 11.7 0.0 3.3 2 0 0 2 2 2 1 PAS fold SPOB_a PF14689.6 gi|73668357|ref|YP_304372.1| - 0.023 14.4 0.2 0.15 11.8 0.1 2.5 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain PAS_6 PF08348.11 gi|73668357|ref|YP_304372.1| - 0.034 14.0 0.0 0.16 11.8 0.0 2.2 2 0 0 2 2 2 0 YheO-like PAS domain dCache_1 PF02743.18 gi|73668357|ref|YP_304372.1| - 0.12 12.1 0.0 0.77 9.5 0.0 2.4 1 1 1 2 2 2 0 Cache domain PEP-utilisers_N PF05524.13 gi|73668357|ref|YP_304372.1| - 1.9 8.7 4.5 1.6 8.9 0.1 2.9 3 0 0 3 3 3 0 PEP-utilising enzyme, N-terminal GAF_2 PF13185.6 gi|73668358|ref|YP_304373.1| - 5.5e-11 42.9 0.0 8e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|73668358|ref|YP_304373.1| - 0.00061 20.4 0.0 0.00077 20.1 0.0 1.2 1 0 0 1 1 1 1 GAF domain HALZ PF02183.18 gi|73668358|ref|YP_304373.1| - 0.002 18.3 2.0 0.0036 17.5 2.0 1.4 1 0 0 1 1 1 1 Homeobox associated leucine zipper GAF_3 PF13492.6 gi|73668358|ref|YP_304373.1| - 0.0071 16.7 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 GAF domain PLDc_N PF13396.6 gi|73668359|ref|YP_304374.1| - 1.7e-09 37.5 7.4 1.7e-09 37.5 7.4 1.7 2 0 0 2 2 2 1 Phospholipase_D-nuclease N-terminal HlyIII PF03006.20 gi|73668359|ref|YP_304374.1| - 0.00096 18.9 1.6 0.0011 18.7 1.6 1.1 1 0 0 1 1 1 1 Haemolysin-III related JAMP PF05571.12 gi|73668359|ref|YP_304374.1| - 0.0059 16.3 0.8 0.0066 16.1 0.8 1.0 1 0 0 1 1 1 1 JNK1/MAPK8-associated membrane protein Phage_holin_3_6 PF07332.11 gi|73668359|ref|YP_304374.1| - 0.052 13.6 2.9 0.058 13.4 2.9 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4131 PF13567.6 gi|73668359|ref|YP_304374.1| - 0.07 12.8 4.0 0.079 12.6 4.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF1496 PF07383.12 gi|73668359|ref|YP_304374.1| - 0.081 12.5 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1496) BatA PF07584.11 gi|73668359|ref|YP_304374.1| - 0.16 12.4 0.3 0.16 12.4 0.3 2.1 1 1 1 2 2 2 0 Aerotolerance regulator N-terminal YqjK PF13997.6 gi|73668359|ref|YP_304374.1| - 0.17 12.2 0.1 0.17 12.2 0.1 1.7 2 0 0 2 2 2 0 YqjK-like protein DUF2207 PF09972.9 gi|73668359|ref|YP_304374.1| - 5.5 5.6 7.4 6.4 5.4 7.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) E1-E2_ATPase PF00122.20 gi|73668360|ref|YP_304375.1| - 2.5e-54 183.5 4.3 6.3e-54 182.2 4.3 1.7 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|73668360|ref|YP_304375.1| - 9e-40 137.2 0.5 1.5e-39 136.5 0.5 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|73668360|ref|YP_304375.1| - 6.5e-06 26.1 0.5 0.0026 17.6 0.5 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Zip PF02535.22 gi|73668360|ref|YP_304375.1| - 3.5e-05 23.2 3.2 0.023 13.9 0.0 3.1 2 1 1 3 3 3 1 ZIP Zinc transporter HAD PF12710.7 gi|73668360|ref|YP_304375.1| - 0.018 15.5 0.0 0.037 14.4 0.0 1.5 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase ProQ_C PF17516.2 gi|73668360|ref|YP_304375.1| - 0.38 10.2 2.6 1.4 8.4 0.5 2.4 2 0 0 2 2 2 0 ProQ C-terminal domain Zn_Tnp_IS1595 PF12760.7 gi|73668361|ref|YP_304376.1| - 0.0031 17.4 1.5 0.014 15.3 0.0 2.1 2 0 0 2 2 2 1 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|73668361|ref|YP_304376.1| - 0.0037 17.3 2.4 0.014 15.5 2.4 1.9 1 1 0 1 1 1 1 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|73668361|ref|YP_304376.1| - 0.0084 15.5 1.2 0.35 10.4 0.1 2.4 2 0 0 2 2 2 1 zinc-ribbon domain zf-C2H2_4 PF13894.6 gi|73668361|ref|YP_304376.1| - 0.019 15.7 2.7 1.6 9.8 0.6 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2H2_11 PF16622.5 gi|73668361|ref|YP_304376.1| - 0.025 14.4 3.8 0.11 12.2 1.1 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type HypA PF01155.19 gi|73668361|ref|YP_304376.1| - 0.044 13.8 1.7 0.056 13.5 1.7 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Terminase_GpA PF05876.12 gi|73668361|ref|YP_304376.1| - 0.064 11.8 2.0 0.069 11.7 2.0 1.0 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) Headcase PF16002.5 gi|73668361|ref|YP_304376.1| - 0.07 12.6 3.6 0.086 12.3 3.6 1.1 1 0 0 1 1 1 0 Headcase protein zf-UDP PF14569.6 gi|73668361|ref|YP_304376.1| - 0.093 12.9 3.7 0.26 11.4 3.7 1.7 1 1 0 1 1 1 0 Zinc-binding RING-finger Ribosomal_S26e PF01283.19 gi|73668361|ref|YP_304376.1| - 0.16 12.4 2.5 0.51 10.8 0.1 2.0 2 0 0 2 2 2 0 Ribosomal protein S26e zf-LITAF-like PF10601.9 gi|73668361|ref|YP_304376.1| - 0.18 12.1 5.1 5.9 7.2 1.1 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|73668361|ref|YP_304376.1| - 1.2 9.1 9.0 3.7 7.6 3.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF2892 PF11127.8 gi|73668362|ref|YP_304377.1| - 1.9e-11 43.8 0.2 2.5e-11 43.4 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) YcaO PF02624.16 gi|73668363|ref|YP_304378.1| - 5.6e-86 288.8 0.0 7.2e-86 288.4 0.0 1.1 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding TfuA PF07812.12 gi|73668364|ref|YP_304379.1| - 6.1e-46 155.1 0.0 1.2e-45 154.1 0.0 1.5 1 0 0 1 1 1 1 TfuA-like protein NKAIN PF05640.14 gi|73668365|ref|YP_304380.1| - 1.2 8.4 7.3 1.3 8.2 7.3 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein Usp PF00582.26 gi|73668367|ref|YP_304382.1| - 6.6e-35 120.7 0.0 7.6e-35 120.5 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Toprim_4 PF13662.6 gi|73668367|ref|YP_304382.1| - 0.13 12.7 0.7 3.6 8.1 0.0 2.7 3 0 0 3 3 3 0 Toprim domain Usp PF00582.26 gi|73668368|ref|YP_304383.1| - 8.7e-30 104.1 0.0 1.1e-29 103.8 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Ferritin PF00210.24 gi|73668369|ref|YP_304384.1| - 2.7e-43 147.3 3.3 3.2e-43 147.1 3.3 1.0 1 0 0 1 1 1 1 Ferritin-like domain Lipoprotein_10 PF03202.13 gi|73668369|ref|YP_304384.1| - 0.027 14.9 3.3 0.028 14.8 1.3 2.0 1 1 1 2 2 2 0 Putative mycoplasma lipoprotein, C-terminal region ARD PF03079.14 gi|73668369|ref|YP_304384.1| - 0.096 12.9 2.2 10 6.3 0.7 2.3 2 0 0 2 2 2 0 ARD/ARD' family Radical_SAM PF04055.21 gi|73668370|ref|YP_304385.1| - 1.5e-14 54.7 0.2 6e-14 52.8 0.1 2.0 1 1 1 2 2 2 1 Radical SAM superfamily TrmB PF01978.19 gi|73668370|ref|YP_304385.1| - 0.0029 17.5 0.2 0.015 15.1 0.1 2.4 2 1 1 3 3 3 1 Sugar-specific transcriptional regulator TrmB DUF166 PF02593.14 gi|73668370|ref|YP_304385.1| - 0.028 14.0 0.3 0.11 12.0 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function FliG_N PF14842.6 gi|73668370|ref|YP_304385.1| - 0.12 12.9 1.9 7.6 7.1 0.4 3.6 2 1 1 3 3 3 0 FliG N-terminal domain DHHA1 PF02272.19 gi|73668370|ref|YP_304385.1| - 0.13 12.7 0.4 5.2 7.5 0.0 2.5 2 0 0 2 2 2 0 DHHA1 domain DUF5320 PF17253.2 gi|73668371|ref|YP_304386.1| - 8.9e-29 100.5 24.6 6.9e-14 52.7 16.8 2.1 1 1 1 2 2 2 2 Family of unknown function (DUF5320) APG6_N PF17675.1 gi|73668371|ref|YP_304386.1| - 0.013 16.0 1.0 0.016 15.8 1.0 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF134 PF02001.16 gi|73668372|ref|YP_304387.1| - 1.4e-17 64.1 0.0 1.8e-17 63.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4_2 PF08281.12 gi|73668372|ref|YP_304387.1| - 0.00012 21.7 0.4 0.0002 21.0 0.4 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_37 PF13744.6 gi|73668372|ref|YP_304387.1| - 0.00095 19.1 0.1 0.0015 18.4 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|73668372|ref|YP_304387.1| - 0.0017 17.8 0.3 0.0025 17.3 0.3 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 DUF2857 PF11198.8 gi|73668372|ref|YP_304387.1| - 0.032 14.0 0.2 0.044 13.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) HTH_23 PF13384.6 gi|73668372|ref|YP_304387.1| - 0.046 13.5 0.0 0.075 12.9 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain zf-C4_Topoisom PF01396.19 gi|73668372|ref|YP_304387.1| - 0.1 12.4 1.0 0.1 12.4 1.0 2.5 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger HTH_psq PF05225.16 gi|73668372|ref|YP_304387.1| - 0.15 11.9 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 helix-turn-helix, Psq domain zinc_ribbon_2 PF13240.6 gi|73668372|ref|YP_304387.1| - 0.33 10.7 6.2 2.9 7.7 0.7 2.5 2 0 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|73668372|ref|YP_304387.1| - 0.54 10.0 9.0 3 7.7 1.8 2.5 2 0 0 2 2 2 0 A2L zinc ribbon domain SQHop_cyclase_C PF13243.6 gi|73668373|ref|YP_304388.1| - 0.00036 19.7 5.0 0.081 12.0 0.5 3.7 1 1 1 2 2 2 2 Squalene-hopene cyclase C-terminal domain Prenyltrans PF00432.21 gi|73668373|ref|YP_304388.1| - 0.00047 19.8 5.2 0.37 10.6 0.0 4.8 3 1 0 3 3 3 1 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_N PF13249.6 gi|73668373|ref|YP_304388.1| - 0.011 14.9 0.7 0.67 9.0 0.0 3.3 1 1 3 4 4 4 0 Squalene-hopene cyclase N-terminal domain PLRV_ORF5 PF01690.17 gi|73668373|ref|YP_304388.1| - 0.09 11.5 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Potato leaf roll virus readthrough protein DUF1638 PF07796.11 gi|73668374|ref|YP_304389.1| - 1.7e-30 106.2 0.0 2.2e-30 105.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF1638 PF07796.11 gi|73668375|ref|YP_304390.1| - 1e-35 123.2 0.0 1.5e-35 122.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) TetR_N PF00440.23 gi|73668376|ref|YP_304391.1| - 1.2e-08 34.6 0.0 2.2e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Sigma70_r4_2 PF08281.12 gi|73668376|ref|YP_304391.1| - 0.0018 17.9 0.0 0.0053 16.4 0.0 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 Terminase_5 PF06056.12 gi|73668376|ref|YP_304391.1| - 0.0023 17.8 0.0 0.0046 16.8 0.0 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) NAD_binding_2 PF03446.15 gi|73668377|ref|YP_304392.1| - 0.005 17.0 0.0 0.012 15.7 0.0 1.6 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_7 PF13241.6 gi|73668377|ref|YP_304392.1| - 0.036 14.5 0.0 0.16 12.4 0.0 1.9 2 0 0 2 2 2 0 Putative NAD(P)-binding 3HCDH_N PF02737.18 gi|73668377|ref|YP_304392.1| - 0.077 12.9 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATP-grasp_3 PF02655.14 gi|73668378|ref|YP_304393.1| - 2e-09 37.7 0.0 3.5e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|73668378|ref|YP_304393.1| - 0.00066 19.4 0.0 0.0019 17.9 0.0 1.7 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon FAD_oxidored PF12831.7 gi|73668378|ref|YP_304393.1| - 0.026 13.9 0.0 0.035 13.5 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase Dala_Dala_lig_C PF07478.13 gi|73668378|ref|YP_304393.1| - 0.033 13.7 0.0 0.073 12.6 0.0 1.5 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus GIDA PF01134.22 gi|73668378|ref|YP_304393.1| - 0.042 12.9 0.0 0.056 12.5 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A GARS_A PF01071.19 gi|73668378|ref|YP_304393.1| - 0.11 12.2 0.2 7.6 6.2 0.1 2.8 3 0 0 3 3 3 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Radical_SAM PF04055.21 gi|73668379|ref|YP_304394.1| - 1.7e-10 41.6 0.5 1.4e-09 38.5 0.2 2.3 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|73668379|ref|YP_304394.1| - 0.00045 20.3 0.3 0.00076 19.6 0.3 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|73668379|ref|YP_304394.1| - 0.012 15.9 0.2 0.019 15.3 0.2 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain tRNA-synt_2d PF01409.20 gi|73668380|ref|YP_304395.1| - 4.5e-11 42.7 0.0 5.4e-08 32.6 0.0 2.4 2 1 0 2 2 2 2 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 gi|73668380|ref|YP_304395.1| - 4.4e-08 32.6 0.4 7.4e-06 25.3 0.0 2.8 3 1 0 3 3 3 2 tRNA synthetases class II (D, K and N) tRNA-synt_2b PF00587.25 gi|73668380|ref|YP_304395.1| - 0.00017 21.6 0.0 0.00089 19.3 0.0 2.0 1 1 1 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA_synthFbeta PF17759.1 gi|73668380|ref|YP_304395.1| - 0.00073 19.0 0.0 0.0015 18.0 0.0 1.5 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain FAP PF07174.11 gi|73668380|ref|YP_304395.1| - 0.8 9.1 8.1 1.2 8.6 8.1 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) RACo_C_ter PF14574.6 gi|73668381|ref|YP_304396.1| - 9.2e-72 241.2 1.7 2.6e-71 239.7 1.7 1.7 1 1 0 1 1 1 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|73668381|ref|YP_304396.1| - 7.4e-11 42.0 0.0 1.6e-10 40.9 0.0 1.6 1 0 0 1 1 1 1 RACo middle region Fer4_21 PF14697.6 gi|73668381|ref|YP_304396.1| - 3.5e-10 39.9 10.8 6.7e-10 38.9 10.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73668381|ref|YP_304396.1| - 1.1e-08 34.5 10.0 0.00051 19.7 3.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73668381|ref|YP_304396.1| - 6.3e-08 32.4 12.9 4e-06 26.7 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73668381|ref|YP_304396.1| - 5.8e-07 30.0 10.8 1.2e-06 29.0 10.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668381|ref|YP_304396.1| - 1.1e-06 28.4 11.4 0.00057 19.8 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73668381|ref|YP_304396.1| - 1.6e-06 28.2 10.6 2.8e-06 27.4 10.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668381|ref|YP_304396.1| - 9.3e-06 26.5 11.6 0.019 15.9 3.6 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|73668381|ref|YP_304396.1| - 1.3e-05 25.2 12.6 5.1e-05 23.3 12.9 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73668381|ref|YP_304396.1| - 0.0014 19.1 5.1 0.11 13.1 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73668381|ref|YP_304396.1| - 0.0066 16.9 13.3 0.22 12.1 2.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73668381|ref|YP_304396.1| - 0.17 12.4 13.1 1 9.9 3.3 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73668381|ref|YP_304396.1| - 0.47 11.5 15.8 0.33 12.0 3.4 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73668381|ref|YP_304396.1| - 1.8 8.8 12.7 6.3 7.0 2.5 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73668381|ref|YP_304396.1| - 2.1 8.9 10.8 6 7.5 10.8 1.8 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I URO-D PF01208.17 gi|73668382|ref|YP_304397.1| - 6.3e-79 265.6 0.2 7.1e-79 265.5 0.2 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) B12-binding_2 PF02607.17 gi|73668383|ref|YP_304398.1| - 3.5e-19 69.0 1.8 3.8e-19 68.9 0.1 2.0 2 1 0 2 2 2 1 B12 binding domain B12-binding PF02310.19 gi|73668383|ref|YP_304398.1| - 2.9e-17 62.8 0.4 5.2e-17 62.0 0.4 1.4 1 0 0 1 1 1 1 B12 binding domain Blt1 PF12754.7 gi|73668383|ref|YP_304398.1| - 0.14 12.5 0.1 0.24 11.7 0.1 1.4 1 0 0 1 1 1 0 Blt1 N-terminal domain MtmB PF05369.12 gi|480537608|ref|YP_304399.3| - 9.9e-234 776.1 3.3 1.1e-233 775.9 3.3 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB B12-binding_2 PF02607.17 gi|73668386|ref|YP_304401.1| - 3.4e-20 72.3 0.4 3.4e-20 72.3 0.4 1.7 2 0 0 2 2 2 1 B12 binding domain B12-binding PF02310.19 gi|73668386|ref|YP_304401.1| - 3e-16 59.6 0.3 5.8e-16 58.6 0.3 1.4 1 0 0 1 1 1 1 B12 binding domain Blt1 PF12754.7 gi|73668386|ref|YP_304401.1| - 0.081 13.2 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 Blt1 N-terminal domain MtmB PF05369.12 gi|488599557|ref|YP_007936917.1| - 9.9e-234 776.1 3.3 1.1e-233 775.9 3.3 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB AA_permease PF00324.21 gi|73668387|ref|YP_304402.1| - 3e-40 138.2 41.5 4e-40 137.8 41.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|73668387|ref|YP_304402.1| - 2.2e-24 86.1 41.1 4e-24 85.2 41.0 1.4 1 1 0 1 1 1 1 Amino acid permease Herpes_LMP1 PF05297.11 gi|73668387|ref|YP_304402.1| - 0.3 10.2 11.4 0.036 13.3 2.0 3.0 3 0 0 3 3 3 0 Herpesvirus latent membrane protein 1 (LMP1) DUF2583 PF10762.9 gi|73668388|ref|YP_304403.1| - 0.015 15.7 0.4 0.02 15.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2583) FixQ PF05545.11 gi|73668389|ref|YP_304404.1| - 9 6.4 12.2 1.8 8.6 1.7 2.2 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ DNA_pol3_delta2 PF13177.6 gi|73668390|ref|YP_304405.1| - 1.6e-14 54.0 0.0 2.9e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 gi|73668390|ref|YP_304405.1| - 3e-12 46.8 0.8 1.1e-11 44.9 0.1 2.3 2 1 0 3 3 2 1 Replication factor C C-terminal domain AAA PF00004.29 gi|73668390|ref|YP_304405.1| - 4.1e-10 40.2 0.0 1e-09 38.9 0.0 1.7 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|73668390|ref|YP_304405.1| - 6e-05 23.1 0.1 0.00027 21.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|73668390|ref|YP_304405.1| - 0.00056 19.7 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|73668390|ref|YP_304405.1| - 0.00078 19.7 0.0 0.002 18.4 0.0 1.6 1 1 0 1 1 1 1 AAA domain DNA_pol3_delta PF06144.13 gi|73668390|ref|YP_304405.1| - 0.00082 19.2 0.0 0.0027 17.5 0.0 1.9 2 0 0 2 2 2 1 DNA polymerase III, delta subunit ATPase_2 PF01637.18 gi|73668390|ref|YP_304405.1| - 0.00098 19.1 0.0 0.0023 17.9 0.0 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|73668390|ref|YP_304405.1| - 0.0026 18.2 0.0 0.011 16.1 0.0 2.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 gi|73668390|ref|YP_304405.1| - 0.0035 17.0 0.6 0.092 12.3 0.0 3.0 2 2 1 3 3 3 1 AAA domain RuvB_N PF05496.12 gi|73668390|ref|YP_304405.1| - 0.017 14.9 1.6 0.41 10.4 0.0 3.3 3 2 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain RNA_helicase PF00910.22 gi|73668390|ref|YP_304405.1| - 0.029 14.8 0.0 0.06 13.8 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 gi|73668390|ref|YP_304405.1| - 0.031 14.8 0.0 0.063 13.8 0.0 1.7 1 1 0 1 1 1 0 AAA domain TIP49 PF06068.13 gi|73668390|ref|YP_304405.1| - 0.035 13.3 0.0 0.087 12.0 0.0 1.6 2 0 0 2 2 2 0 TIP49 P-loop domain CLP1_P PF16575.5 gi|73668390|ref|YP_304405.1| - 0.045 13.5 0.0 7.2 6.4 0.0 2.2 1 1 1 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_assoc_2 PF16193.5 gi|73668390|ref|YP_304405.1| - 0.058 13.7 0.7 0.41 11.0 0.1 2.4 2 0 0 2 2 2 0 AAA C-terminal domain AAA_23 PF13476.6 gi|73668390|ref|YP_304405.1| - 0.06 13.8 0.6 0.12 12.8 0.6 1.8 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|73668390|ref|YP_304405.1| - 0.1 12.0 0.0 0.37 10.1 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|73668390|ref|YP_304405.1| - 0.12 12.5 0.0 0.25 11.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain DUF4315 PF14193.6 gi|73668390|ref|YP_304405.1| - 0.18 11.8 0.4 0.4 10.7 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4315) SecD_SecF PF02355.16 gi|73668391|ref|YP_304406.1| - 1.6e-14 53.7 10.1 3e-14 52.8 10.1 1.3 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|73668391|ref|YP_304406.1| - 0.038 13.5 0.9 0.14 11.7 0.1 2.4 2 0 0 2 2 2 0 SecD/SecF GG Motif MMPL PF03176.15 gi|73668391|ref|YP_304406.1| - 0.12 11.3 16.8 0.014 14.4 12.0 1.7 2 0 0 2 2 2 0 MMPL family SecD_SecF PF02355.16 gi|73668392|ref|YP_304407.1| - 3.2e-34 118.0 14.1 5.1e-34 117.3 14.1 1.3 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|73668392|ref|YP_304407.1| - 3.5e-05 23.1 0.0 9.6e-05 21.7 0.0 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif Patched PF02460.18 gi|73668392|ref|YP_304407.1| - 0.035 12.2 14.4 0.047 11.8 14.4 1.1 1 0 0 1 1 1 0 Patched family DUF2187 PF09953.9 gi|73668392|ref|YP_304407.1| - 0.048 13.6 0.1 0.11 12.6 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2187) dCMP_cyt_deam_1 PF00383.23 gi|73668393|ref|YP_304408.1| - 1.1e-29 102.2 1.2 1.5e-29 101.9 1.2 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|73668393|ref|YP_304408.1| - 3.1e-20 72.3 0.1 3.7e-20 72.1 0.1 1.1 1 0 0 1 1 1 1 MafB19-like deaminase Bd3614-deam PF14439.6 gi|73668393|ref|YP_304408.1| - 0.0037 17.3 0.5 0.0077 16.3 0.3 1.6 1 1 1 2 2 2 1 Bd3614-like deaminase APOBEC_N PF08210.11 gi|73668393|ref|YP_304408.1| - 0.0072 16.2 0.1 0.0086 16.0 0.1 1.2 1 0 0 1 1 1 1 APOBEC-like N-terminal domain APOBEC3 PF18771.1 gi|73668393|ref|YP_304408.1| - 0.043 13.9 0.2 0.058 13.5 0.2 1.2 1 0 0 1 1 1 0 APOBEC3 OTT_1508_deam PF14441.6 gi|73668393|ref|YP_304408.1| - 0.045 13.8 0.2 0.073 13.1 0.2 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase zf-C3HC4 PF00097.25 gi|73668393|ref|YP_304408.1| - 0.085 12.7 2.4 0.13 12.2 1.5 1.8 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Cupin_2 PF07883.11 gi|73668394|ref|YP_304409.1| - 5.4e-09 35.6 0.0 7.1e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|73668394|ref|YP_304409.1| - 0.00035 20.5 0.0 0.00044 20.2 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|73668394|ref|YP_304409.1| - 0.0015 18.2 0.0 0.002 17.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Ppnp PF06865.11 gi|73668394|ref|YP_304409.1| - 0.008 16.6 0.0 0.01 16.2 0.0 1.1 1 0 0 1 1 1 1 Pyrimidine/purine nucleoside phosphorylase EutQ PF06249.12 gi|73668394|ref|YP_304409.1| - 0.0083 15.9 0.0 0.0091 15.8 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_1 PF00190.22 gi|73668394|ref|YP_304409.1| - 0.13 11.9 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Cupin Lyx_isomer PF07385.12 gi|73668394|ref|YP_304409.1| - 0.14 11.3 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 D-lyxose isomerase DUF1796 PF08795.10 gi|73668394|ref|YP_304409.1| - 0.2 11.6 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Putative papain-like cysteine peptidase (DUF1796) F420_ligase PF01996.16 gi|73668395|ref|YP_304410.1| - 5.3e-58 196.2 0.1 6.4e-58 196.0 0.1 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase DUF5064 PF16703.5 gi|73668396|ref|YP_304411.1| - 0.018 15.5 0.1 0.024 15.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5064) DUF1128 PF06569.11 gi|73668396|ref|YP_304411.1| - 0.1 12.6 2.0 0.75 9.8 0.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1128) DUF29 PF01724.16 gi|73668396|ref|YP_304411.1| - 0.17 12.1 4.4 0.2 11.9 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF29 PNPase PF03726.14 gi|73668396|ref|YP_304411.1| - 2.7 8.5 7.4 20 5.8 2.6 2.6 1 1 1 2 2 2 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain Cation_efflux PF01545.21 gi|73668397|ref|YP_304412.1| - 3.4e-48 164.0 11.3 4.1e-48 163.8 11.3 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|73668397|ref|YP_304412.1| - 6.3e-24 83.9 0.4 1e-23 83.2 0.4 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF3760 PF12586.8 gi|73668397|ref|YP_304412.1| - 0.051 13.8 0.1 1 9.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3760) AMP-binding_C_2 PF14535.6 gi|73668397|ref|YP_304412.1| - 0.074 13.4 0.0 0.18 12.2 0.0 1.6 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain HSP20 PF00011.21 gi|73668398|ref|YP_304413.1| - 7e-21 74.3 0.7 8.4e-21 74.0 0.7 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|73668398|ref|YP_304413.1| - 2.6e-10 39.7 0.0 3.6e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|73668398|ref|YP_304413.1| - 4.8e-07 30.7 0.0 6.5e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 CS domain FKBP26_C PF18046.1 gi|73668398|ref|YP_304413.1| - 0.0086 16.2 0.8 2.6 8.2 0.2 2.4 2 1 0 2 2 2 2 FKBP26_C-terminal GvpH PF05455.11 gi|73668398|ref|YP_304413.1| - 0.043 13.9 0.0 0.064 13.3 0.0 1.5 1 0 0 1 1 1 0 GvpH DUF2718 PF10918.8 gi|73668398|ref|YP_304413.1| - 0.16 12.5 0.2 0.22 12.0 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2718) PhosphMutase PF10143.9 gi|73668399|ref|YP_304414.1| - 8.3e-60 201.5 0.0 1.2e-59 201.0 0.0 1.3 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|73668399|ref|YP_304414.1| - 1.7e-37 129.2 0.0 1.9e-37 129.0 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Alk_phosphatase PF00245.20 gi|73668399|ref|YP_304414.1| - 0.12 11.3 0.7 0.18 10.7 0.1 1.5 2 0 0 2 2 2 0 Alkaline phosphatase AA_kinase PF00696.28 gi|73668400|ref|YP_304415.1| - 2.7e-50 171.2 0.1 2.7e-50 171.2 0.1 1.9 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.6 gi|73668400|ref|YP_304415.1| - 1.4e-24 85.7 5.0 3.3e-12 46.0 0.1 2.6 2 0 0 2 2 2 2 ACT domain ACT PF01842.25 gi|73668400|ref|YP_304415.1| - 7.9e-20 70.3 4.0 2.3e-09 36.9 0.2 2.9 3 0 0 3 3 3 2 ACT domain ACT_6 PF13740.6 gi|73668400|ref|YP_304415.1| - 0.0011 18.9 2.3 0.049 13.6 0.1 3.3 3 0 0 3 3 3 1 ACT domain Hydrolase_6 PF13344.6 gi|73668400|ref|YP_304415.1| - 0.031 14.4 0.1 11 6.2 0.0 3.2 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase Gasdermin PF04598.12 gi|73668400|ref|YP_304415.1| - 0.05 13.0 0.5 6.3 6.1 0.2 2.3 2 0 0 2 2 2 0 Gasdermin pore forming domain DUF4094 PF13334.6 gi|73668400|ref|YP_304415.1| - 0.099 13.1 0.1 0.21 12.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) AIRS_C PF02769.22 gi|73668401|ref|YP_304416.1| - 1.5e-19 70.7 0.1 3.4e-19 69.5 0.0 1.7 2 0 0 2 2 2 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|73668401|ref|YP_304416.1| - 2.2e-15 57.1 0.4 4e-15 56.2 0.4 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain DUF2089 PF09862.9 gi|73668402|ref|YP_304417.1| - 9.6e-14 51.4 0.1 1.1e-13 51.2 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2089) Sigma70_r4 PF04545.16 gi|73668402|ref|YP_304417.1| - 0.0055 16.2 0.0 0.0089 15.5 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 GerE PF00196.19 gi|73668402|ref|YP_304417.1| - 0.0066 16.0 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_Tnp_ISL3 PF13542.6 gi|73668402|ref|YP_304417.1| - 0.012 15.0 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_30 PF13556.6 gi|73668402|ref|YP_304417.1| - 0.02 14.7 0.0 0.031 14.1 0.0 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_10 PF04967.12 gi|73668402|ref|YP_304417.1| - 0.12 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain HTH_23 PF13384.6 gi|73668402|ref|YP_304417.1| - 0.13 12.1 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain DUF1894 PF08979.11 gi|73668403|ref|YP_304418.1| - 2e-34 117.8 0.3 2.5e-34 117.5 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) DUF1890 PF09001.11 gi|73668404|ref|YP_304419.1| - 1.9e-55 187.1 0.2 2.2e-55 186.9 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1890) DUF1894 PF08979.11 gi|73668405|ref|YP_304420.1| - 2.1e-31 108.1 0.4 2.5e-31 107.9 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) BPL_N PF09825.9 gi|73668406|ref|YP_304421.1| - 0.028 13.5 0.1 0.079 12.0 0.0 1.6 2 0 0 2 2 2 0 Biotin-protein ligase, N terminal TGT_C2 PF14810.6 gi|73668408|ref|YP_304423.1| - 9.7e-28 96.1 0.1 1.8e-27 95.2 0.1 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|73668408|ref|YP_304423.1| - 3.3e-12 46.2 0.2 5.8e-12 45.4 0.2 1.4 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|73668408|ref|YP_304423.1| - 0.018 15.3 0.0 0.03 14.6 0.0 1.4 1 0 0 1 1 1 0 UPF0113 PUA domain AbrB_C PF18277.1 gi|73668408|ref|YP_304423.1| - 0.033 13.8 0.0 4.4 7.0 0.0 2.7 3 0 0 3 3 3 0 AbrB C-terminal domain PUA_3 PF17785.1 gi|73668408|ref|YP_304423.1| - 0.1 12.4 0.0 0.28 11.0 0.0 1.7 2 0 0 2 2 2 0 PUA-like domain Bactofilin PF04519.13 gi|73668409|ref|YP_304424.1| - 1.3e-09 38.3 14.4 3.7e-06 27.1 0.4 4.3 3 2 1 4 4 4 3 Polymer-forming cytoskeletal Hexapep PF00132.24 gi|73668409|ref|YP_304424.1| - 3.1e-06 26.7 22.3 0.049 13.4 0.0 5.7 5 1 1 6 6 6 3 Bacterial transferase hexapeptide (six repeats) Phage_spike PF18715.1 gi|73668409|ref|YP_304424.1| - 0.0024 17.9 1.0 6.5 6.9 0.0 3.5 3 0 0 3 3 3 2 Phage spike trimer DUF3494 PF11999.8 gi|73668409|ref|YP_304424.1| - 0.067 12.8 1.9 4.8 6.8 0.0 3.3 2 2 1 3 3 3 0 Protein of unknown function (DUF3494) Aminotran_3 PF00202.21 gi|73668410|ref|YP_304425.1| - 1.4e-120 402.7 0.1 1.6e-120 402.5 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|73668410|ref|YP_304425.1| - 3.1e-07 29.9 0.0 5.4e-07 29.1 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|73668410|ref|YP_304425.1| - 5.9e-06 25.8 0.1 1.5e-05 24.4 0.1 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|73668410|ref|YP_304425.1| - 3e-05 23.5 0.1 6e-05 22.5 0.1 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|73668410|ref|YP_304425.1| - 0.00023 20.2 0.0 0.0013 17.7 0.0 1.9 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|73668410|ref|YP_304425.1| - 0.0064 15.1 0.0 0.009 14.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme UPF0020 PF01170.18 gi|73668410|ref|YP_304425.1| - 0.048 13.3 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Aminotran_1_2 PF00155.21 gi|73668411|ref|YP_304426.1| - 9.3e-58 196.1 0.0 1.1e-57 195.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|73668411|ref|YP_304426.1| - 2e-10 40.5 0.0 2.9e-10 40.0 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|73668411|ref|YP_304426.1| - 1e-05 24.7 0.0 0.00026 20.1 0.0 2.1 2 0 0 2 2 2 1 Aminotransferase class-V Alliinase_C PF04864.13 gi|73668411|ref|YP_304426.1| - 7.7e-05 21.7 0.0 0.00012 21.1 0.0 1.2 1 0 0 1 1 1 1 Allinase Cys_Met_Meta_PP PF01053.20 gi|73668411|ref|YP_304426.1| - 0.022 13.3 0.0 0.034 12.7 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme DHNA PF04038.12 gi|73668412|ref|YP_304427.1| - 2.3e-44 150.4 0.0 2.7e-44 150.1 0.0 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase CDP-OH_P_transf PF01066.21 gi|73668413|ref|YP_304428.1| - 4.4e-14 53.0 0.9 4.4e-14 53.0 0.9 3.2 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase PNTB PF02233.16 gi|73668413|ref|YP_304428.1| - 0.033 13.1 0.8 0.033 13.1 0.8 2.1 2 0 0 2 2 2 0 NAD(P) transhydrogenase beta subunit HlyIII PF03006.20 gi|73668413|ref|YP_304428.1| - 0.36 10.5 11.3 0.13 12.0 7.2 2.1 2 1 0 2 2 2 0 Haemolysin-III related PS_Dcarbxylase PF02666.15 gi|73668414|ref|YP_304429.1| - 2.2e-29 102.5 1.3 5e-25 88.2 0.3 2.2 1 1 1 2 2 2 2 Phosphatidylserine decarboxylase RnfC_N PF13375.6 gi|73668414|ref|YP_304429.1| - 0.0013 18.7 0.4 7.5 6.6 0.0 3.7 1 1 3 4 4 4 2 RnfC Barrel sandwich hybrid domain Cytochrom_C_asm PF01578.20 gi|73668414|ref|YP_304429.1| - 0.069 12.9 0.2 0.092 12.5 0.2 1.2 1 0 0 1 1 1 0 Cytochrome C assembly protein Exosortase_EpsH PF09721.10 gi|73668415|ref|YP_304430.1| - 6.8e-11 42.2 15.3 1.1e-10 41.5 15.3 1.3 1 1 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) NUDIX PF00293.28 gi|73668416|ref|YP_304431.1| - 1.6e-18 67.0 0.0 1.9e-18 66.7 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 gi|73668416|ref|YP_304431.1| - 0.087 12.3 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) TFIIS_C PF01096.18 gi|73668417|ref|YP_304432.1| - 1.1e-18 66.8 15.0 2.3e-18 65.7 3.9 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|73668417|ref|YP_304432.1| - 5.4e-08 32.6 5.3 5.4e-08 32.6 5.3 3.4 3 1 0 3 3 3 1 RNA polymerases M/15 Kd subunit OrfB_Zn_ribbon PF07282.11 gi|73668417|ref|YP_304432.1| - 6.5e-07 29.2 6.5 9.8e-05 22.2 0.4 2.3 2 0 0 2 2 2 2 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.12 gi|73668417|ref|YP_304432.1| - 3.2e-06 26.5 8.8 0.003 17.0 0.9 2.8 2 1 0 2 2 2 2 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|73668417|ref|YP_304432.1| - 3.4e-05 23.7 11.1 0.0013 18.7 0.7 2.5 2 1 0 2 2 2 2 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|73668417|ref|YP_304432.1| - 0.00068 19.3 15.3 1.4 8.7 0.3 4.3 4 0 0 4 4 4 1 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|73668417|ref|YP_304432.1| - 0.00084 19.2 14.5 1.3 9.0 0.9 4.2 3 1 1 4 4 4 2 zinc-ribbon domain TackOD1 PF18551.1 gi|73668417|ref|YP_304432.1| - 0.001 18.8 7.5 0.0031 17.2 0.7 2.6 2 1 1 3 3 3 1 Thaumarchaeal output domain 1 zf-ACC PF17848.1 gi|73668417|ref|YP_304432.1| - 0.0013 18.8 15.5 1.1 9.3 0.3 4.2 4 0 0 4 4 4 2 Acetyl-coA carboxylase zinc finger domain zf_UBZ PF18439.1 gi|73668417|ref|YP_304432.1| - 0.0013 18.3 10.1 4.4 7.0 0.1 4.2 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 gi|73668417|ref|YP_304432.1| - 0.0016 18.5 9.4 1.9 8.7 0.1 4.2 4 0 0 4 4 4 1 Zinc ribbon domain Ogr_Delta PF04606.12 gi|73668417|ref|YP_304432.1| - 0.0018 18.2 0.5 0.0018 18.2 0.5 2.7 3 0 0 3 3 3 1 Ogr/Delta-like zinc finger zf-CHY PF05495.12 gi|73668417|ref|YP_304432.1| - 0.0029 18.0 1.1 0.048 14.1 1.2 2.5 1 1 0 1 1 1 1 CHY zinc finger IBR PF01485.21 gi|73668417|ref|YP_304432.1| - 0.004 17.4 10.3 12 6.2 10.3 2.7 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain Nudix_N_2 PF14803.6 gi|73668417|ref|YP_304432.1| - 0.006 16.5 7.2 0.13 12.2 0.2 3.5 3 1 0 3 3 3 1 Nudix N-terminal zf-Mss51 PF13824.6 gi|73668417|ref|YP_304432.1| - 0.0063 16.6 12.3 0.047 13.8 1.6 3.2 2 2 1 3 3 3 1 Zinc-finger of mitochondrial splicing suppressor 51 zinc-ribbons_6 PF07191.12 gi|73668417|ref|YP_304432.1| - 0.0095 15.9 8.1 0.025 14.5 0.6 2.5 2 1 0 2 2 2 1 zinc-ribbons Ribosomal_S27e PF01667.17 gi|73668417|ref|YP_304432.1| - 0.013 15.2 5.8 0.43 10.3 0.0 3.5 3 1 1 4 4 4 0 Ribosomal protein S27 DZR PF12773.7 gi|73668417|ref|YP_304432.1| - 0.014 15.4 12.5 0.029 14.4 1.4 2.9 2 1 0 2 2 2 0 Double zinc ribbon HypA PF01155.19 gi|73668417|ref|YP_304432.1| - 0.015 15.3 6.0 0.04 14.0 0.1 2.8 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|73668417|ref|YP_304432.1| - 0.019 14.4 18.2 0.42 10.1 0.5 4.1 3 1 1 4 4 4 0 zinc-ribbon domain zf-AN1 PF01428.16 gi|73668417|ref|YP_304432.1| - 0.025 14.8 10.1 8.9 6.6 3.2 3.3 3 0 0 3 3 3 0 AN1-like Zinc finger Desulfoferrod_N PF06397.12 gi|73668417|ref|YP_304432.1| - 0.027 14.1 6.8 1.7 8.3 0.2 3.2 3 0 0 3 3 3 0 Desulfoferrodoxin, N-terminal domain zf-BED PF02892.15 gi|73668417|ref|YP_304432.1| - 0.044 13.8 4.7 1.2 9.2 0.8 3.2 3 0 0 3 3 3 0 BED zinc finger Rubredoxin_2 PF18073.1 gi|73668417|ref|YP_304432.1| - 0.05 13.3 15.6 2.7 7.8 0.8 4.1 4 0 0 4 4 4 0 Rubredoxin metal binding domain FdhE PF04216.12 gi|73668417|ref|YP_304432.1| - 0.057 13.3 1.4 0.058 13.3 0.1 1.6 2 0 0 2 2 2 0 Protein involved in formate dehydrogenase formation FYVE PF01363.21 gi|73668417|ref|YP_304432.1| - 0.096 12.8 6.7 0.94 9.7 6.7 2.2 1 1 0 1 1 1 0 FYVE zinc finger DUF2387 PF09526.10 gi|73668417|ref|YP_304432.1| - 0.096 12.9 8.2 0.36 11.0 0.5 2.4 2 1 0 2 2 2 0 Probable metal-binding protein (DUF2387) zinc-ribbon_6 PF10005.9 gi|73668417|ref|YP_304432.1| - 0.097 13.4 3.7 0.47 11.2 3.8 2.0 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|73668417|ref|YP_304432.1| - 0.1 13.4 0.2 0.1 13.4 0.2 3.0 1 1 1 3 3 3 0 zinc-ribbon family FUR PF01475.19 gi|73668417|ref|YP_304432.1| - 0.11 12.7 0.2 0.5 10.5 0.1 2.0 2 0 0 2 2 2 0 Ferric uptake regulator family zf-C4_Topoisom PF01396.19 gi|73668417|ref|YP_304432.1| - 0.13 12.1 14.2 2 8.3 0.4 3.8 3 1 1 4 4 4 0 Topoisomerase DNA binding C4 zinc finger Terminase_GpA PF05876.12 gi|73668417|ref|YP_304432.1| - 0.14 10.7 4.4 0.066 11.8 1.0 1.8 2 0 0 2 2 2 0 Phage terminase large subunit (GpA) zf-ZPR1 PF03367.13 gi|73668417|ref|YP_304432.1| - 0.14 12.0 0.0 0.14 12.0 0.0 2.3 2 1 0 2 2 2 0 ZPR1 zinc-finger domain C1_1 PF00130.22 gi|73668417|ref|YP_304432.1| - 0.18 11.7 8.3 3 7.8 1.4 2.8 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) UPF0547 PF10571.9 gi|73668417|ref|YP_304432.1| - 0.27 11.4 16.7 1.4 9.1 0.1 4.1 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 DUF3268 PF11672.8 gi|73668417|ref|YP_304432.1| - 0.34 11.2 2.8 1 9.7 0.2 2.3 2 1 1 3 3 2 0 zinc-finger-containing domain PADR1 PF08063.12 gi|73668417|ref|YP_304432.1| - 0.35 10.7 9.0 2.7 7.8 1.5 3.1 3 0 0 3 3 3 0 PADR1 (NUC008) domain Baculo_LEF5_C PF11792.8 gi|73668417|ref|YP_304432.1| - 0.36 10.5 0.1 0.36 10.5 0.1 3.3 5 0 0 5 5 4 0 Baculoviridae late expression factor 5 C-terminal domain DNA_RNApol_7kD PF03604.13 gi|73668417|ref|YP_304432.1| - 0.53 10.0 11.6 4.4 7.1 0.1 3.4 3 1 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zf-C2H2 PF00096.26 gi|73668417|ref|YP_304432.1| - 0.79 10.3 12.2 29 5.4 0.1 4.2 3 1 1 4 4 4 0 Zinc finger, C2H2 type DUF2752 PF10825.8 gi|73668417|ref|YP_304432.1| - 1 9.5 0.0 1 9.5 0.0 2.9 4 0 0 4 4 3 0 Protein of unknown function (DUF2752) RecR PF02132.15 gi|73668417|ref|YP_304432.1| - 1.1 8.9 7.9 14 5.4 0.1 3.8 4 0 0 4 4 4 0 RecR protein Baculo_ME53 PF06061.11 gi|73668417|ref|YP_304432.1| - 1.8 7.7 4.2 27 3.9 0.0 2.3 2 1 0 2 2 2 0 Baculoviridae ME53 zf-3CxxC_2 PF17180.4 gi|73668417|ref|YP_304432.1| - 2.1 9.2 17.7 12 6.7 0.0 4.1 2 2 1 3 3 3 0 Zinc-binding domain DUF35_N PF12172.8 gi|73668417|ref|YP_304432.1| - 2.6 8.0 8.9 43 4.1 0.1 4.0 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-RING_7 PF02591.15 gi|73668417|ref|YP_304432.1| - 2.8 8.2 6.3 5.7 7.2 0.1 3.4 4 0 0 4 4 3 0 C4-type zinc ribbon domain YhfH PF14149.6 gi|73668417|ref|YP_304432.1| - 3.8 7.6 13.1 12 6.0 0.2 3.8 3 1 0 3 3 3 0 YhfH-like protein zf-UDP PF14569.6 gi|73668417|ref|YP_304432.1| - 4.5 7.5 8.2 21 5.3 0.5 3.4 2 1 1 3 3 3 0 Zinc-binding RING-finger Mu-like_Com PF10122.9 gi|73668417|ref|YP_304432.1| - 4.8 6.7 6.8 6 6.4 0.1 3.3 3 1 0 3 3 3 0 Mu-like prophage protein Com eIF-5_eIF-2B PF01873.17 gi|73668417|ref|YP_304432.1| - 5.3 7.0 7.3 0.72 9.7 0.4 2.3 2 1 0 2 2 2 0 Domain found in IF2B/IF5 zf-H2C2_2 PF13465.6 gi|73668417|ref|YP_304432.1| - 8 7.1 16.1 19 5.9 0.5 4.1 3 1 1 4 4 4 0 Zinc-finger double domain PCNA_N PF00705.18 gi|73668418|ref|YP_304433.1| - 8.5e-13 48.1 2.0 1.5e-12 47.3 0.4 2.0 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|73668418|ref|YP_304433.1| - 8.6e-11 42.1 0.0 2.7e-10 40.5 0.0 1.9 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|73668418|ref|YP_304433.1| - 6.5e-05 22.5 0.0 0.00027 20.5 0.0 1.8 2 0 0 2 2 2 1 Rad9 DNA_primase_lrg PF04104.14 gi|73668419|ref|YP_304434.1| - 4.7e-30 104.9 0.0 4.7e-30 104.9 0.0 2.8 1 1 1 2 2 2 1 Eukaryotic and archaeal DNA primase, large subunit CDC45 PF02724.14 gi|73668419|ref|YP_304434.1| - 0.0027 16.1 21.2 0.0034 15.8 21.2 1.1 1 0 0 1 1 1 1 CDC45-like protein DDHD PF02862.17 gi|73668419|ref|YP_304434.1| - 0.095 12.8 4.6 0.17 12.0 4.6 1.5 1 0 0 1 1 1 0 DDHD domain LpxK PF02606.14 gi|73668419|ref|YP_304434.1| - 0.36 9.9 0.0 0.36 9.9 0.0 1.8 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_11 PF13086.6 gi|73668419|ref|YP_304434.1| - 1.6 8.4 16.7 2.8 7.6 16.7 1.4 1 0 0 1 1 1 0 AAA domain VIR_N PF15912.5 gi|73668419|ref|YP_304434.1| - 1.9 8.0 13.5 3.2 7.3 13.5 1.4 1 0 0 1 1 1 0 Virilizer, N-terminal FrhB_FdhB_C PF04432.13 gi|73668420|ref|YP_304435.1| - 7.6e-41 139.5 0.8 1.3e-40 138.8 0.0 1.7 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|73668420|ref|YP_304435.1| - 6.7e-26 90.2 0.1 2.8e-25 88.2 0.1 2.1 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term YHS PF04945.13 gi|73668420|ref|YP_304435.1| - 7.2e-11 42.0 2.2 2.1e-10 40.6 2.2 1.8 1 0 0 1 1 1 1 YHS domain Fer4_10 PF13237.6 gi|73668420|ref|YP_304435.1| - 0.00011 22.2 12.5 0.00018 21.6 10.6 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73668420|ref|YP_304435.1| - 0.0054 17.1 15.1 0.14 12.7 1.7 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain zf-FCS PF06467.14 gi|73668420|ref|YP_304435.1| - 0.026 14.4 4.7 0.026 14.4 4.7 2.7 3 0 0 3 3 3 0 MYM-type Zinc finger with FCS sequence motif Fer4_9 PF13187.6 gi|73668420|ref|YP_304435.1| - 0.028 14.6 14.9 0.15 12.3 12.6 2.9 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73668420|ref|YP_304435.1| - 0.084 12.7 18.1 0.17 11.8 3.7 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73668420|ref|YP_304435.1| - 0.16 12.9 9.5 2.3 9.2 0.7 3.1 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|73668420|ref|YP_304435.1| - 0.28 11.8 16.4 0.4 11.3 2.8 3.0 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668420|ref|YP_304435.1| - 0.47 11.1 15.2 0.61 10.7 2.5 3.2 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73668420|ref|YP_304435.1| - 0.89 10.3 7.6 6.4 7.6 1.3 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_6 PF12837.7 gi|73668420|ref|YP_304435.1| - 1 9.5 17.4 0.098 12.8 2.2 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73668420|ref|YP_304435.1| - 1.1 9.8 14.5 4.1 7.9 2.5 2.8 1 1 3 4 4 4 0 4Fe-4S dicluster domain zf-FLZ PF04570.14 gi|73668420|ref|YP_304435.1| - 1.2 8.7 7.0 0.42 10.1 1.0 3.0 3 0 0 3 3 3 0 zinc-finger of the FCS-type, C2-C2 Fer4_21 PF14697.6 gi|73668420|ref|YP_304435.1| - 1.9 8.7 11.5 7 6.9 11.5 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668420|ref|YP_304435.1| - 3.1 8.1 19.5 0.5 10.6 1.7 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Glu-tRNAGln PF02686.15 gi|73668421|ref|YP_304436.1| - 3.1e-16 59.4 0.5 4.1e-16 59.0 0.5 1.2 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Chorion_S16 PF05836.12 gi|73668421|ref|YP_304436.1| - 0.23 11.7 0.0 0.28 11.5 0.0 1.1 1 0 0 1 1 1 0 Chorion protein S16 Amidase PF01425.21 gi|73668422|ref|YP_304437.1| - 3.3e-162 540.6 0.0 3.7e-162 540.4 0.0 1.0 1 0 0 1 1 1 1 Amidase PSII_BNR PF14870.6 gi|73668422|ref|YP_304437.1| - 0.015 14.6 0.0 0.025 13.8 0.0 1.3 1 0 0 1 1 1 0 Photosynthesis system II assembly factor YCF48 GatB_N PF02934.15 gi|73668423|ref|YP_304438.1| - 5.2e-104 347.5 0.0 7.4e-104 346.9 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|73668423|ref|YP_304438.1| - 3.9e-51 172.8 1.2 6.4e-51 172.1 1.2 1.4 1 0 0 1 1 1 1 GatB domain CN_hydrolase PF00795.22 gi|73668424|ref|YP_304439.1| - 1.3e-46 159.1 0.0 1.5e-46 158.9 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Nitroreductase PF00881.24 gi|73668425|ref|YP_304440.1| - 8.2e-18 65.0 0.0 1.5e-17 64.2 0.0 1.4 1 0 0 1 1 1 1 Nitroreductase family Fer4_7 PF12838.7 gi|73668425|ref|YP_304440.1| - 4.3e-11 43.2 5.4 1.9e-05 25.1 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73668425|ref|YP_304440.1| - 4.5e-10 39.5 19.1 8.2e-08 32.3 10.6 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73668425|ref|YP_304440.1| - 6.4e-10 38.4 20.7 9.2e-05 22.1 3.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73668425|ref|YP_304440.1| - 5.5e-09 35.7 17.7 0.00019 21.4 7.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73668425|ref|YP_304440.1| - 1.1e-08 35.9 2.6 0.0001 23.1 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|73668425|ref|YP_304440.1| - 7.9e-08 32.3 10.5 1.6e-06 28.2 11.6 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73668425|ref|YP_304440.1| - 1.7e-07 31.2 8.8 3.1e-07 30.4 8.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668425|ref|YP_304440.1| - 5.9e-06 26.1 14.7 0.0083 16.2 2.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|73668425|ref|YP_304440.1| - 1.1e-05 26.1 7.6 0.034 14.9 0.7 2.6 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|73668425|ref|YP_304440.1| - 0.00023 21.6 9.6 0.038 14.4 1.3 2.4 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73668425|ref|YP_304440.1| - 0.00029 21.6 20.8 0.005 17.7 7.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73668425|ref|YP_304440.1| - 0.00047 20.5 14.9 0.014 15.9 3.4 2.4 1 1 1 2 2 2 2 4Fe-4S binding domain TM1586_NiRdase PF14512.6 gi|73668425|ref|YP_304440.1| - 0.00057 19.5 0.1 0.065 12.8 0.0 2.2 2 0 0 2 2 2 1 Putative TM nitroreductase Fer4_17 PF13534.6 gi|73668425|ref|YP_304440.1| - 0.0012 19.3 10.5 0.016 15.8 0.8 2.4 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73668425|ref|YP_304440.1| - 0.027 14.7 1.6 0.027 14.7 1.6 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73668425|ref|YP_304440.1| - 0.055 14.0 11.4 0.54 10.9 2.2 2.7 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|73668425|ref|YP_304440.1| - 0.31 11.9 14.1 0.17 12.8 3.2 2.4 1 1 0 2 2 2 0 4Fe-4S dicluster domain Ac76 PF05814.11 gi|73668426|ref|YP_304441.1| - 0.14 12.2 0.0 0.14 12.2 0.0 3.4 4 0 0 4 4 4 0 Orf76 (Ac76) Mrr_cat PF04471.12 gi|73668427|ref|YP_304442.1| - 9.2e-35 119.1 0.0 1.4e-34 118.5 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease Mrr_N PF14338.6 gi|73668427|ref|YP_304442.1| - 2.7e-32 110.8 0.0 4.9e-32 109.9 0.0 1.5 1 0 0 1 1 1 1 Mrr N-terminal domain Mrr_cat_2 PF13156.6 gi|73668427|ref|YP_304442.1| - 1.7e-10 40.9 0.0 2.9e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease DUF4638 PF15472.6 gi|73668427|ref|YP_304442.1| - 0.011 15.5 0.1 0.018 14.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4638) Peptidase_M48 PF01435.18 gi|73668428|ref|YP_304443.1| - 2.4e-37 128.6 0.1 3.8e-37 128.0 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|73668428|ref|YP_304443.1| - 0.00017 20.9 0.0 0.00028 20.2 0.0 1.4 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF1129 PF06570.11 gi|73668428|ref|YP_304443.1| - 0.34 10.4 4.3 2.9 7.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) Thymidylat_synt PF00303.19 gi|73668429|ref|YP_304444.1| - 2.4e-23 82.6 0.0 2.9e-23 82.3 0.0 1.1 1 0 0 1 1 1 1 Thymidylate synthase BNR_6 PF15899.5 gi|73668429|ref|YP_304444.1| - 0.057 13.5 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 BNR-Asp box repeat EPSP_synthase PF00275.20 gi|73668430|ref|YP_304445.1| - 8.1e-113 377.3 0.3 9.5e-113 377.0 0.3 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Cu_amine_oxidN1 PF07833.11 gi|73668430|ref|YP_304445.1| - 0.15 12.6 0.0 1 9.9 0.0 2.4 2 0 0 2 2 2 0 Copper amine oxidase N-terminal domain PrmA PF06325.13 gi|73668431|ref|YP_304446.1| - 1.8e-06 27.6 0.0 2.8e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|73668431|ref|YP_304446.1| - 2.5e-05 23.9 0.0 4.1e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|73668431|ref|YP_304446.1| - 0.00018 22.2 0.0 0.0012 19.5 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|73668431|ref|YP_304446.1| - 0.047 13.3 0.0 0.08 12.6 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 AAA_31 PF13614.6 gi|73668431|ref|YP_304446.1| - 0.11 12.4 0.2 0.78 9.6 0.0 2.4 1 1 1 2 2 2 0 AAA domain MCR_alpha_N PF02745.15 gi|73668432|ref|YP_304447.1| - 2.6e-145 482.8 0.7 3.4e-145 482.4 0.7 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.17 gi|73668432|ref|YP_304447.1| - 5.1e-66 220.9 4.5 5.1e-66 220.9 4.5 2.0 2 0 0 2 2 2 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_gamma PF02240.16 gi|73668433|ref|YP_304448.1| - 7.1e-116 385.7 0.3 8e-116 385.5 0.3 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_C PF04609.12 gi|73668434|ref|YP_304449.1| - 1.6e-06 27.5 0.1 1.9e-06 27.2 0.1 1.2 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C MCR_D PF02505.14 gi|73668435|ref|YP_304450.1| - 1.2e-55 187.3 0.1 1.4e-55 187.1 0.1 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D MCR_beta PF02241.18 gi|73668436|ref|YP_304451.1| - 4.4e-135 449.1 4.8 7.3e-135 448.3 4.8 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.15 gi|73668436|ref|YP_304451.1| - 5.2e-78 260.9 2.6 7.9e-78 260.3 2.6 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain GSDH PF07995.11 gi|73668436|ref|YP_304451.1| - 0.058 12.7 0.0 0.086 12.1 0.0 1.2 1 0 0 1 1 1 0 Glucose / Sorbosone dehydrogenase Radical_SAM PF04055.21 gi|73668437|ref|YP_304452.1| - 6.3e-11 42.9 8.4 3.1e-09 37.4 6.9 3.2 2 1 0 2 2 2 1 Radical SAM superfamily DUF4159 PF13709.6 gi|73668437|ref|YP_304452.1| - 0.073 12.5 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4159) PolC_DP2 PF03833.13 gi|73668438|ref|YP_304453.1| - 0 1297.2 0.0 0 1296.4 0.0 1.4 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 TerY_C PF15616.6 gi|73668438|ref|YP_304453.1| - 0.0015 18.7 2.8 0.0015 18.7 2.8 2.2 2 0 0 2 2 2 1 TerY-C metal binding domain zinc-ribbons_6 PF07191.12 gi|73668438|ref|YP_304453.1| - 0.0024 17.8 10.6 0.49 10.4 8.1 2.5 2 0 0 2 2 2 2 zinc-ribbons HypA PF01155.19 gi|73668438|ref|YP_304453.1| - 0.024 14.6 11.4 0.58 10.2 0.1 3.3 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|73668438|ref|YP_304453.1| - 0.25 11.4 20.4 0.46 10.5 0.4 3.0 3 1 0 3 3 3 0 Double zinc ribbon DUF2072 PF09845.9 gi|73668438|ref|YP_304453.1| - 1.4 9.2 5.8 0.82 9.9 0.3 2.9 3 0 0 3 3 3 0 Zn-ribbon containing protein DUF4231 PF14015.6 gi|73668439|ref|YP_304454.1| - 0.014 15.8 0.2 0.017 15.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) TMEM208_SND2 PF05620.11 gi|73668439|ref|YP_304454.1| - 0.016 15.0 0.3 0.019 14.7 0.3 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 DUF4181 PF13789.6 gi|73668439|ref|YP_304454.1| - 0.017 15.4 0.4 0.023 14.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) DUF3040 PF11239.8 gi|73668439|ref|YP_304454.1| - 0.025 14.8 0.0 0.027 14.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF2207 PF09972.9 gi|73668439|ref|YP_304454.1| - 0.031 13.0 0.2 0.036 12.8 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) S_4TM PF18159.1 gi|73668439|ref|YP_304454.1| - 0.08 12.2 0.1 0.09 12.1 0.1 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF3899 PF13038.6 gi|73668439|ref|YP_304454.1| - 0.34 11.4 3.4 0.81 10.2 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) Sua5_yciO_yrdC PF01300.18 gi|73668440|ref|YP_304455.1| - 1.1e-57 194.4 0.0 1.7e-57 193.8 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 gi|73668440|ref|YP_304455.1| - 2.2e-24 86.5 0.0 5.3e-24 85.3 0.0 1.6 2 0 0 2 2 2 1 Putative GTP-binding controlling metal-binding RuBisCO_large PF00016.20 gi|73668441|ref|YP_304456.1| - 2.6e-104 348.6 0.1 3.2e-104 348.3 0.1 1.1 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 gi|73668441|ref|YP_304456.1| - 1.5e-42 144.6 0.0 4e-42 143.2 0.0 1.8 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain DUF1646 PF07854.12 gi|73668442|ref|YP_304457.1| - 1.3e-129 432.5 30.3 1.5e-129 432.3 30.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DUF1646 PF07854.12 gi|73668443|ref|YP_304458.1| - 6.5e-132 440.1 32.0 7.5e-132 439.9 32.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DUF1646 PF07854.12 gi|73668444|ref|YP_304459.1| - 2e-131 438.5 32.6 2.3e-131 438.3 32.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) ArsA_HSP20 PF17886.1 gi|73668445|ref|YP_304460.1| - 2e-08 33.6 0.0 2.8e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|73668445|ref|YP_304460.1| - 8.4e-07 29.1 0.1 2.4e-05 24.4 0.0 2.1 1 1 1 2 2 2 1 Hsp20/alpha crystallin family HSP20 PF00011.21 gi|73668446|ref|YP_304461.1| - 4.7e-09 36.3 0.7 6.7e-07 29.4 0.7 2.2 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|73668446|ref|YP_304461.1| - 2.5e-08 33.3 0.0 3.7e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA AAA PF00004.29 gi|73668447|ref|YP_304462.1| - 3.5e-99 328.4 0.0 7e-49 165.6 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|73668447|ref|YP_304462.1| - 9.1e-34 115.0 1.4 2.6e-16 59.1 0.2 3.0 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|73668447|ref|YP_304462.1| - 1.2e-29 102.3 0.7 3.9e-28 97.4 1.6 2.7 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.14 gi|73668447|ref|YP_304462.1| - 2.1e-16 60.5 0.0 6.8e-07 29.6 0.0 3.1 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|73668447|ref|YP_304462.1| - 1.5e-15 57.3 0.0 1.2e-07 31.6 0.0 3.0 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|73668447|ref|YP_304462.1| - 4.2e-15 56.5 0.2 8.4e-07 29.5 0.0 3.4 2 1 0 2 2 2 2 AAA ATPase domain CDC48_2 PF02933.17 gi|73668447|ref|YP_304462.1| - 2.4e-14 52.9 0.3 7.3e-14 51.3 0.3 1.8 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_5 PF07728.14 gi|73668447|ref|YP_304462.1| - 4.8e-13 49.3 1.5 6.4e-05 23.0 0.1 3.8 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) TIP49 PF06068.13 gi|73668447|ref|YP_304462.1| - 3.1e-11 43.1 0.1 0.00012 21.5 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|73668447|ref|YP_304462.1| - 4.2e-11 43.2 0.0 7e-05 23.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|73668447|ref|YP_304462.1| - 1.4e-10 41.6 2.0 0.0015 18.8 0.0 4.2 3 2 2 5 5 4 2 AAA domain AAA_14 PF13173.6 gi|73668447|ref|YP_304462.1| - 1.4e-10 41.3 0.0 0.00021 21.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 gi|73668447|ref|YP_304462.1| - 6.1e-08 32.6 0.1 0.035 13.8 0.0 3.9 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_18 PF13238.6 gi|73668447|ref|YP_304462.1| - 1.5e-07 32.0 0.0 0.026 15.1 0.0 2.9 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.10 gi|73668447|ref|YP_304462.1| - 1.9e-07 31.0 1.6 0.0077 16.2 0.0 3.6 3 0 0 3 3 3 2 Vps4 C terminal oligomerisation domain IstB_IS21 PF01695.17 gi|73668447|ref|YP_304462.1| - 2.3e-07 30.7 0.0 0.011 15.5 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_3 PF07726.11 gi|73668447|ref|YP_304462.1| - 4.5e-07 29.8 0.0 0.013 15.4 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|73668447|ref|YP_304462.1| - 8.4e-07 29.4 0.4 0.053 13.8 0.0 3.0 3 0 0 3 3 2 2 AAA domain ABC_tran PF00005.27 gi|73668447|ref|YP_304462.1| - 8.4e-07 29.6 0.3 0.044 14.3 0.0 2.8 3 0 0 3 3 2 2 ABC transporter Mg_chelatase PF01078.21 gi|73668447|ref|YP_304462.1| - 8.8e-07 28.5 0.0 0.034 13.5 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|73668447|ref|YP_304462.1| - 9.5e-07 28.5 0.0 0.031 13.8 0.0 2.8 3 0 0 3 3 2 2 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|73668447|ref|YP_304462.1| - 4.1e-06 27.1 0.0 0.084 13.3 0.0 2.6 2 0 0 2 2 2 2 RNA helicase Zeta_toxin PF06414.12 gi|73668447|ref|YP_304462.1| - 1.1e-05 24.8 0.0 0.074 12.3 0.0 2.7 2 0 0 2 2 2 2 Zeta toxin TsaE PF02367.17 gi|73668447|ref|YP_304462.1| - 1.5e-05 25.0 0.1 0.25 11.3 0.0 3.0 2 1 1 3 3 3 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|73668447|ref|YP_304462.1| - 3.1e-05 23.8 0.0 0.31 10.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|73668447|ref|YP_304462.1| - 4.9e-05 22.9 0.1 0.23 10.9 0.0 2.6 2 0 0 2 2 2 2 PhoH-like protein NACHT PF05729.12 gi|73668447|ref|YP_304462.1| - 7e-05 22.8 0.1 2.1 8.2 0.0 3.8 3 1 1 4 4 4 2 NACHT domain AAA_17 PF13207.6 gi|73668447|ref|YP_304462.1| - 0.00011 22.7 0.0 0.19 12.1 0.0 3.0 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|73668447|ref|YP_304462.1| - 0.00011 21.4 0.0 0.67 9.1 0.0 2.9 2 1 0 2 2 2 2 NB-ARC domain DUF815 PF05673.13 gi|73668447|ref|YP_304462.1| - 0.00013 21.2 0.0 0.44 9.7 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_30 PF13604.6 gi|73668447|ref|YP_304462.1| - 0.00027 20.7 0.0 0.63 9.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.6 gi|73668447|ref|YP_304462.1| - 0.00029 21.2 0.6 1.1 9.5 0.0 3.0 2 1 0 3 3 2 1 AAA domain DUF2075 PF09848.9 gi|73668447|ref|YP_304462.1| - 0.00038 19.8 0.0 0.22 10.7 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) Sigma54_activ_2 PF14532.6 gi|73668447|ref|YP_304462.1| - 0.00043 20.4 0.0 1.7 8.8 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_25 PF13481.6 gi|73668447|ref|YP_304462.1| - 0.00044 19.9 4.4 2.5 7.6 0.9 4.1 3 1 0 3 3 3 1 AAA domain ATPase PF06745.13 gi|73668447|ref|YP_304462.1| - 0.00049 19.5 4.9 0.8 9.0 0.1 4.0 3 2 1 4 4 4 2 KaiC AAA_11 PF13086.6 gi|73668447|ref|YP_304462.1| - 0.00055 19.8 1.4 0.34 10.7 0.0 2.6 3 0 0 3 3 2 2 AAA domain Parvo_NS1 PF01057.17 gi|73668447|ref|YP_304462.1| - 0.0011 18.2 0.0 1.6 7.7 0.0 2.4 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 ATPase_2 PF01637.18 gi|73668447|ref|YP_304462.1| - 0.0021 18.0 0.1 3.7 7.4 0.0 3.2 2 2 1 3 3 3 0 ATPase domain predominantly from Archaea Cytidylate_kin PF02224.18 gi|73668447|ref|YP_304462.1| - 0.009 15.8 0.2 2.8 7.6 0.0 2.6 2 0 0 2 2 2 1 Cytidylate kinase Bac_DnaA PF00308.18 gi|73668447|ref|YP_304462.1| - 0.013 15.4 0.0 3.7 7.3 0.0 2.6 2 0 0 2 2 2 0 Bacterial dnaA protein ResIII PF04851.15 gi|73668447|ref|YP_304462.1| - 0.014 15.4 0.0 3.7 7.5 0.0 2.9 2 1 1 3 3 2 0 Type III restriction enzyme, res subunit Cytidylate_kin2 PF13189.6 gi|73668447|ref|YP_304462.1| - 0.015 15.4 0.1 7 6.7 0.0 2.7 2 0 0 2 2 2 0 Cytidylate kinase-like family TniB PF05621.11 gi|73668447|ref|YP_304462.1| - 0.018 14.5 0.0 8.5 5.7 0.0 3.1 3 1 1 4 4 3 0 Bacterial TniB protein Hydin_ADK PF17213.3 gi|73668447|ref|YP_304462.1| - 0.019 15.3 0.7 1.4 9.1 0.0 3.0 3 0 0 3 3 2 0 Hydin Adenylate kinase-like domain CPT PF07931.12 gi|73668447|ref|YP_304462.1| - 0.021 14.6 0.0 2.6 7.9 0.0 2.7 3 0 0 3 3 2 0 Chloramphenicol phosphotransferase-like protein Viral_helicase1 PF01443.18 gi|73668447|ref|YP_304462.1| - 0.023 14.4 0.0 5.1 6.8 0.0 2.4 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AFG1_ATPase PF03969.16 gi|73668447|ref|YP_304462.1| - 0.024 13.6 0.0 5.6 5.7 0.0 2.5 2 0 0 2 2 2 0 AFG1-like ATPase NTPase_1 PF03266.15 gi|73668447|ref|YP_304462.1| - 0.029 14.3 5.1 8.3 6.3 0.0 4.1 3 2 0 4 4 4 0 NTPase Guanylate_kin PF00625.21 gi|73668447|ref|YP_304462.1| - 0.035 13.8 2.5 33 4.1 0.0 4.5 3 2 2 5 5 5 0 Guanylate kinase SKI PF01202.22 gi|73668447|ref|YP_304462.1| - 0.059 13.5 0.9 6.2 6.9 0.0 3.1 3 0 0 3 3 3 0 Shikimate kinase UFD1 PF03152.14 gi|73668447|ref|YP_304462.1| - 0.07 12.6 0.0 1.7 8.1 0.0 2.4 1 1 1 2 2 2 0 Ubiquitin fusion degradation protein UFD1 Rad17 PF03215.15 gi|73668447|ref|YP_304462.1| - 0.074 13.0 0.0 19 5.1 0.0 2.7 2 1 0 2 2 2 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|73668447|ref|YP_304462.1| - 0.081 12.7 0.0 16 5.4 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain IPT PF01745.16 gi|73668447|ref|YP_304462.1| - 0.12 11.7 0.1 14 4.9 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase DUF1677 PF07911.13 gi|73668447|ref|YP_304462.1| - 0.18 12.2 0.0 15 6.0 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1677) HTH_5 PF01022.20 gi|73668448|ref|YP_304463.1| - 1.4e-15 56.9 0.2 3.4e-11 42.8 0.1 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73668448|ref|YP_304463.1| - 1.7e-10 40.8 1.0 4.6e-08 33.0 0.0 2.6 3 0 0 3 3 3 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|73668448|ref|YP_304463.1| - 3e-07 30.2 0.0 0.0052 16.7 0.0 2.4 2 0 0 2 2 2 2 MarR family DprA_WH PF17782.1 gi|73668448|ref|YP_304463.1| - 5.4e-05 23.2 0.0 0.00063 19.8 0.0 2.1 2 0 0 2 2 2 1 DprA winged helix domain LexA_DNA_bind PF01726.16 gi|73668448|ref|YP_304463.1| - 0.00093 18.9 0.0 0.23 11.3 0.0 2.8 3 0 0 3 3 3 1 LexA DNA binding domain TrmB PF01978.19 gi|73668448|ref|YP_304463.1| - 0.0015 18.4 0.0 0.046 13.6 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB SKA2 PF16740.5 gi|73668448|ref|YP_304463.1| - 0.0039 17.0 0.4 0.0065 16.3 0.4 1.5 1 0 0 1 1 1 1 Spindle and kinetochore-associated protein 2 MarR PF01047.22 gi|73668448|ref|YP_304463.1| - 0.0053 16.6 0.0 0.062 13.2 0.0 2.3 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 gi|73668448|ref|YP_304463.1| - 0.0061 16.5 0.4 0.39 10.7 0.0 3.0 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain HTH_34 PF13601.6 gi|73668448|ref|YP_304463.1| - 0.0062 16.7 0.0 0.025 14.8 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_27 PF13463.6 gi|73668448|ref|YP_304463.1| - 0.015 15.8 0.1 2.8 8.5 0.0 3.0 3 0 0 3 3 3 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|73668448|ref|YP_304463.1| - 0.017 15.0 0.0 0.044 13.7 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|73668448|ref|YP_304463.1| - 0.022 14.3 0.5 0.022 14.3 0.5 2.9 4 1 0 4 4 4 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|73668448|ref|YP_304463.1| - 0.023 14.6 0.1 0.079 12.9 0.0 2.0 2 0 0 2 2 2 0 HTH domain Rrf2 PF02082.20 gi|73668448|ref|YP_304463.1| - 0.025 14.9 0.0 0.56 10.6 0.0 2.5 2 0 0 2 2 2 0 Transcriptional regulator DUF742 PF05331.11 gi|73668448|ref|YP_304463.1| - 0.045 13.6 0.0 8.2 6.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF742) DUF2513 PF10711.9 gi|73668448|ref|YP_304463.1| - 0.054 13.8 0.1 0.17 12.2 0.0 1.9 2 1 0 2 2 2 0 Hypothetical protein (DUF2513) HTH_29 PF13551.6 gi|73668448|ref|YP_304463.1| - 0.091 12.8 0.0 0.33 11.0 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn helix PDZ_5 PF17817.1 gi|73668448|ref|YP_304463.1| - 0.1 12.9 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 PDZ domain COG2 PF06148.11 gi|73668448|ref|YP_304463.1| - 0.11 12.5 1.4 5 7.2 0.4 2.2 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Pep_M12B_propep PF01562.19 gi|73668449|ref|YP_304464.1| - 0.038 14.2 0.1 0.055 13.7 0.1 1.3 1 0 0 1 1 1 0 Reprolysin family propeptide DUF423 PF04241.15 gi|73668449|ref|YP_304464.1| - 0.044 14.0 0.3 9.1 6.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF423) DUF2072 PF09845.9 gi|73668450|ref|YP_304465.1| - 3.3e-46 156.8 0.2 3.9e-46 156.6 0.2 1.0 1 0 0 1 1 1 1 Zn-ribbon containing protein Zn-ribbon_8 PF09723.10 gi|73668450|ref|YP_304465.1| - 0.0054 16.8 0.7 0.013 15.6 0.7 1.6 1 0 0 1 1 1 1 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|73668450|ref|YP_304465.1| - 0.039 13.4 3.1 1.3 8.5 0.8 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Prok-RING_1 PF14446.6 gi|73668450|ref|YP_304465.1| - 0.056 13.4 0.5 0.12 12.4 0.5 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 AnfO_nitrog PF09582.10 gi|73668450|ref|YP_304465.1| - 0.059 12.7 0.6 0.14 11.5 0.6 1.7 1 1 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) DUF2205 PF10224.9 gi|73668450|ref|YP_304465.1| - 0.069 13.2 4.9 0.15 12.1 4.6 1.8 1 1 0 1 1 1 0 Short coiled-coil protein TF_Zn_Ribbon PF08271.12 gi|73668450|ref|YP_304465.1| - 0.39 10.3 7.1 1.5 8.4 0.1 3.1 3 1 1 4 4 4 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|73668450|ref|YP_304465.1| - 0.65 9.8 5.1 3.6 7.4 5.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|73668450|ref|YP_304465.1| - 0.73 9.8 3.6 6.2 6.8 0.3 2.5 1 1 1 2 2 2 0 Nudix N-terminal zinc_ribbon_4 PF13717.6 gi|73668450|ref|YP_304465.1| - 2.5 8.1 5.5 2.4 8.2 0.7 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Pribosyltran PF00156.27 gi|73668451|ref|YP_304466.1| - 3.8e-19 68.7 0.0 5e-19 68.4 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|73668451|ref|YP_304466.1| - 0.061 12.7 0.0 0.08 12.4 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase DUF1724 PF08350.10 gi|73668452|ref|YP_304467.1| - 1.1e-16 60.7 2.2 1.2e-16 60.6 0.1 2.2 3 0 0 3 3 3 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|73668452|ref|YP_304467.1| - 0.0017 18.2 0.1 0.0036 17.1 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|73668452|ref|YP_304467.1| - 0.0042 17.0 0.1 0.01 15.8 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.6 gi|73668452|ref|YP_304467.1| - 0.087 13.3 0.2 0.33 11.5 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain Formyl_trans_N PF00551.19 gi|73668453|ref|YP_304468.1| - 1.6e-18 67.1 0.0 2.1e-18 66.7 0.0 1.3 1 0 0 1 1 1 1 Formyl transferase Bromodomain PF00439.25 gi|73668453|ref|YP_304468.1| - 0.23 11.6 1.6 1.8 8.7 0.1 2.5 2 1 0 2 2 2 0 Bromodomain Inhibitor_I42 PF09394.10 gi|73668454|ref|YP_304469.1| - 1.7e-24 86.0 0.5 5.6e-24 84.4 0.3 2.0 2 1 0 2 2 2 1 Chagasin family peptidase inhibitor I42 zf-FCS PF06467.14 gi|73668455|ref|YP_304470.1| - 0.03 14.3 2.8 0.03 14.3 2.8 2.2 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif zf-C4_ClpX PF06689.13 gi|73668455|ref|YP_304470.1| - 0.33 10.9 0.3 0.33 10.9 0.3 2.8 2 1 0 3 3 3 0 ClpX C4-type zinc finger SRP54 PF00448.22 gi|73668456|ref|YP_304471.1| - 8.1e-73 244.2 0.4 1.3e-72 243.5 0.4 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|73668456|ref|YP_304471.1| - 2.7e-29 101.7 6.5 2.9e-29 101.6 3.5 2.5 3 0 0 3 3 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|73668456|ref|YP_304471.1| - 1.4e-23 82.8 0.3 2.5e-20 72.5 0.0 2.9 2 0 0 2 2 2 2 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|73668456|ref|YP_304471.1| - 2.8e-06 27.4 0.0 6.9e-06 26.1 0.0 1.7 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain 6PF2K PF01591.18 gi|73668456|ref|YP_304471.1| - 4.7e-05 22.8 0.0 0.00011 21.6 0.0 1.6 1 0 0 1 1 1 1 6-phosphofructo-2-kinase Zeta_toxin PF06414.12 gi|73668456|ref|YP_304471.1| - 0.00019 20.8 0.0 0.00035 19.9 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 gi|73668456|ref|YP_304471.1| - 0.00093 19.5 0.0 0.0029 17.9 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73668456|ref|YP_304471.1| - 0.0013 19.1 0.0 0.0025 18.2 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|73668456|ref|YP_304471.1| - 0.0018 18.4 0.0 0.0034 17.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|73668456|ref|YP_304471.1| - 0.0024 18.3 0.7 0.16 12.4 0.1 2.9 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.20 gi|73668456|ref|YP_304471.1| - 0.0025 17.7 0.0 0.0064 16.4 0.0 1.7 1 0 0 1 1 1 1 Adenylylsulphate kinase MeaB PF03308.16 gi|73668456|ref|YP_304471.1| - 0.0029 16.7 0.0 0.011 14.7 0.0 1.9 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|73668456|ref|YP_304471.1| - 0.0061 16.2 1.6 0.14 11.8 1.6 2.4 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.14 gi|73668456|ref|YP_304471.1| - 0.0063 16.4 0.1 0.014 15.3 0.1 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ParA PF10609.9 gi|73668456|ref|YP_304471.1| - 0.01 15.3 0.0 0.019 14.4 0.0 1.5 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Thymidylate_kin PF02223.17 gi|73668456|ref|YP_304471.1| - 0.016 14.9 0.6 0.068 12.9 0.2 2.2 2 0 0 2 2 2 0 Thymidylate kinase PFOR_II PF17147.4 gi|73668456|ref|YP_304471.1| - 0.018 15.4 0.2 0.17 12.2 0.0 2.7 2 1 1 3 3 3 0 Pyruvate:ferredoxin oxidoreductase core domain II KTI12 PF08433.10 gi|73668456|ref|YP_304471.1| - 0.019 14.4 0.0 0.038 13.4 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DUF1611 PF07755.11 gi|73668456|ref|YP_304471.1| - 0.035 13.4 0.1 0.067 12.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain ATP_bind_1 PF03029.17 gi|73668456|ref|YP_304471.1| - 0.04 13.7 0.6 0.13 12.1 0.1 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein ArsA_ATPase PF02374.15 gi|73668456|ref|YP_304471.1| - 0.041 13.1 4.5 1.9 7.6 0.3 2.7 2 1 0 2 2 2 0 Anion-transporting ATPase Spectrin PF00435.21 gi|73668456|ref|YP_304471.1| - 0.041 14.4 1.3 8.2 7.0 0.0 3.2 4 0 0 4 4 2 0 Spectrin repeat NB-ARC PF00931.22 gi|73668456|ref|YP_304471.1| - 0.091 11.9 1.2 4.1 6.5 0.1 2.4 2 0 0 2 2 2 0 NB-ARC domain MMR_HSR1 PF01926.23 gi|73668456|ref|YP_304471.1| - 0.093 12.8 0.2 0.36 10.9 0.2 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase LpxK PF02606.14 gi|73668456|ref|YP_304471.1| - 0.11 11.5 0.3 0.28 10.2 0.1 1.7 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase DUF166 PF02593.14 gi|73668456|ref|YP_304471.1| - 0.12 11.9 0.1 5.8 6.4 0.0 2.4 1 1 1 2 2 2 0 Domain of unknown function AAA_5 PF07728.14 gi|73668456|ref|YP_304471.1| - 0.31 11.0 2.0 4.6 7.3 0.1 2.9 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) GATase PF00117.28 gi|73668457|ref|YP_304472.1| - 1.1e-41 142.7 0.0 1.2e-41 142.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|73668457|ref|YP_304472.1| - 3.4e-13 49.9 1.6 1.1e-11 45.0 0.6 2.7 1 1 1 2 2 2 1 Peptidase C26 DeoC PF01791.9 gi|73668458|ref|YP_304473.1| - 7.2e-64 215.6 0.0 8.3e-64 215.4 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase OMPdecase PF00215.24 gi|73668458|ref|YP_304473.1| - 0.11 12.0 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family DHQS PF01959.16 gi|73668459|ref|YP_304474.1| - 1.6e-144 481.2 0.9 1.8e-144 481.0 0.9 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II Peripla_BP_4 PF13407.6 gi|73668459|ref|YP_304474.1| - 0.027 14.1 0.1 1.9 8.0 0.0 2.9 3 0 0 3 3 3 0 Periplasmic binding protein domain Trp_syntA PF00290.20 gi|73668459|ref|YP_304474.1| - 0.027 13.3 0.1 0.052 12.4 0.1 1.4 1 0 0 1 1 1 0 Tryptophan synthase alpha chain ThiG PF05690.14 gi|73668459|ref|YP_304474.1| - 0.044 13.1 0.0 0.19 11.0 0.0 1.8 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG DHquinase_I PF01487.15 gi|73668460|ref|YP_304475.1| - 5.2e-57 193.7 0.4 6.1e-57 193.5 0.4 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase HMGL-like PF00682.19 gi|73668460|ref|YP_304475.1| - 0.00026 20.6 0.3 0.0011 18.6 0.3 2.0 1 1 0 1 1 1 1 HMGL-like DUF2285 PF10074.9 gi|73668460|ref|YP_304475.1| - 0.071 13.8 0.1 0.14 12.8 0.1 1.6 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) Shikimate_dh_N PF08501.11 gi|73668461|ref|YP_304476.1| - 5.1e-26 90.8 0.0 1.5e-25 89.2 0.0 1.8 2 0 0 2 2 2 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|73668461|ref|YP_304476.1| - 5.7e-15 54.8 0.2 1.2e-14 53.8 0.2 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|73668461|ref|YP_304476.1| - 7.7e-10 39.0 0.2 1.2e-09 38.3 0.2 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|73668461|ref|YP_304476.1| - 0.00071 20.1 1.1 0.0017 18.9 1.1 1.7 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent adh_short PF00106.25 gi|73668461|ref|YP_304476.1| - 0.00093 18.7 0.4 0.0014 18.1 0.4 1.4 1 0 0 1 1 1 1 short chain dehydrogenase TrkA_N PF02254.18 gi|73668461|ref|YP_304476.1| - 0.0044 17.3 0.6 0.009 16.3 0.6 1.5 1 1 0 1 1 1 1 TrkA-N domain Pyr_redox_3 PF13738.6 gi|73668461|ref|YP_304476.1| - 0.0056 16.0 0.1 0.008 15.5 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|73668461|ref|YP_304476.1| - 0.0088 16.5 0.0 0.013 15.9 0.0 1.4 1 1 0 1 1 1 1 Putative NAD(P)-binding ApbA PF02558.16 gi|73668461|ref|YP_304476.1| - 0.021 14.5 0.4 0.048 13.3 0.4 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 gi|73668461|ref|YP_304476.1| - 0.029 13.6 0.3 0.041 13.1 0.3 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 gi|73668461|ref|YP_304476.1| - 0.031 13.7 0.4 0.18 11.1 0.3 2.1 2 1 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ldh_1_N PF00056.23 gi|73668461|ref|YP_304476.1| - 0.059 13.5 0.3 0.12 12.4 0.3 1.5 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|73668461|ref|YP_304476.1| - 0.061 13.2 0.2 0.095 12.6 0.2 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YdfZ PF14001.6 gi|73668461|ref|YP_304476.1| - 0.11 13.0 0.0 0.27 11.7 0.0 1.7 1 0 0 1 1 1 0 YdfZ protein PDH PF02153.17 gi|73668462|ref|YP_304477.1| - 2.1e-56 190.8 0.0 3.1e-56 190.3 0.0 1.3 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.15 gi|73668462|ref|YP_304477.1| - 2.1e-09 37.7 0.0 4.1e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|73668462|ref|YP_304477.1| - 8.5e-08 32.7 0.0 3e-07 30.9 0.0 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|73668462|ref|YP_304477.1| - 5e-06 26.0 0.0 1.1e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CoA_binding PF02629.19 gi|73668462|ref|YP_304477.1| - 0.0041 17.8 0.0 0.027 15.1 0.0 2.3 2 0 0 2 2 2 1 CoA binding domain NAD_Gly3P_dh_N PF01210.23 gi|73668462|ref|YP_304477.1| - 0.0048 16.9 1.7 0.26 11.3 1.3 3.0 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Shikimate_DH PF01488.20 gi|73668462|ref|YP_304477.1| - 0.012 15.6 0.0 0.052 13.6 0.0 2.0 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DpaA_N PF16924.5 gi|73668462|ref|YP_304477.1| - 0.018 15.1 0.0 0.046 13.8 0.0 1.7 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain Epimerase PF01370.21 gi|73668462|ref|YP_304477.1| - 0.033 13.7 0.0 0.055 12.9 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family DapB_N PF01113.20 gi|73668462|ref|YP_304477.1| - 0.076 13.1 0.0 0.23 11.6 0.0 1.9 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus HEAT_2 PF13646.6 gi|73668463|ref|YP_304478.1| - 9.2e-47 157.4 10.1 1.1e-13 51.4 0.1 6.6 4 2 3 7 7 7 6 HEAT repeats HEAT_PBS PF03130.16 gi|73668463|ref|YP_304478.1| - 3.4e-33 110.9 15.1 0.00018 21.8 0.0 10.2 10 1 0 10 10 9 7 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|73668463|ref|YP_304478.1| - 1.3e-14 53.1 0.1 0.0026 17.9 0.0 7.7 8 0 0 8 8 8 3 HEAT repeat Vitellogenin_N PF01347.22 gi|73668463|ref|YP_304478.1| - 1.1e-08 34.0 0.4 3.3e-07 29.1 0.0 2.8 1 1 1 2 2 2 1 Lipoprotein amino terminal region HEAT_EZ PF13513.6 gi|73668463|ref|YP_304478.1| - 1.3e-08 35.2 6.4 0.28 11.8 0.0 7.2 6 2 1 7 7 7 2 HEAT-like repeat Arm PF00514.23 gi|73668463|ref|YP_304478.1| - 5.1e-06 26.3 0.2 3.9 7.7 0.0 6.1 7 1 1 8 8 8 1 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|73668463|ref|YP_304478.1| - 6.5e-06 26.3 5.6 0.31 11.1 0.0 5.4 3 1 2 5 5 5 3 non-SMC mitotic condensation complex subunit 1 ERAP1_C PF11838.8 gi|73668463|ref|YP_304478.1| - 1.1e-05 25.2 3.2 0.00028 20.6 0.3 3.0 1 1 1 2 2 2 1 ERAP1-like C-terminal domain Tctex-1 PF03645.13 gi|73668463|ref|YP_304478.1| - 0.096 12.9 0.0 0.23 11.7 0.0 1.7 1 0 0 1 1 1 0 Tctex-1 family RICTOR_V PF14668.6 gi|73668463|ref|YP_304478.1| - 0.14 12.4 0.0 4.2 7.7 0.0 3.1 2 1 0 2 2 2 0 Rapamycin-insensitive companion of mTOR, domain 5 TraG-D_C PF12696.7 gi|73668463|ref|YP_304478.1| - 0.18 11.8 1.2 0.99 9.4 0.0 2.5 2 0 0 2 2 2 0 TraM recognition site of TraD and TraG Aconitase_B_N PF11791.8 gi|73668463|ref|YP_304478.1| - 0.2 11.7 7.3 36 4.4 0.0 5.1 4 1 1 5 5 5 0 Aconitate B N-terminal domain GUN4_N PF16416.5 gi|73668463|ref|YP_304478.1| - 0.35 10.9 1.4 5.5 7.1 0.0 3.4 4 1 1 5 5 5 0 ARM-like repeat domain, GUN4-N terminal UPF0147 PF03685.13 gi|73668463|ref|YP_304478.1| - 0.99 9.5 6.7 6.2 6.9 0.1 4.1 4 1 1 5 5 5 0 Uncharacterised protein family (UPF0147) ABC_tran PF00005.27 gi|73668464|ref|YP_304479.1| - 6.2e-32 111.0 0.0 8.5e-32 110.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668464|ref|YP_304479.1| - 0.00024 21.0 1.6 0.052 13.4 0.4 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668464|ref|YP_304479.1| - 0.00029 20.3 0.0 0.00048 19.6 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|73668464|ref|YP_304479.1| - 0.0012 19.2 0.5 0.0045 17.3 0.5 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|73668464|ref|YP_304479.1| - 0.0016 17.9 0.0 0.0031 16.9 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 gi|73668464|ref|YP_304479.1| - 0.0052 16.5 0.3 0.01 15.5 0.3 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|73668464|ref|YP_304479.1| - 0.0058 17.0 0.0 0.0086 16.5 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain DUF87 PF01935.17 gi|73668464|ref|YP_304479.1| - 0.0064 16.6 0.1 0.01 15.9 0.1 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain AAA PF00004.29 gi|73668464|ref|YP_304479.1| - 0.0085 16.5 0.3 0.033 14.6 0.3 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) dNK PF01712.19 gi|73668464|ref|YP_304479.1| - 0.0087 15.9 0.0 0.014 15.2 0.0 1.3 1 0 0 1 1 1 1 Deoxynucleoside kinase AAA_24 PF13479.6 gi|73668464|ref|YP_304479.1| - 0.015 15.0 0.4 0.032 13.9 0.4 1.6 1 1 0 1 1 1 0 AAA domain MobB PF03205.14 gi|73668464|ref|YP_304479.1| - 0.018 14.9 0.1 0.03 14.2 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.22 gi|73668464|ref|YP_304479.1| - 0.025 13.8 0.0 0.035 13.3 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_13 PF13166.6 gi|73668464|ref|YP_304479.1| - 0.025 13.2 1.9 0.83 8.2 0.4 2.1 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|73668464|ref|YP_304479.1| - 0.028 14.9 0.0 0.038 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 gi|73668464|ref|YP_304479.1| - 0.049 13.4 0.0 0.078 12.7 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NTPase_1 PF03266.15 gi|73668464|ref|YP_304479.1| - 0.057 13.3 0.4 1.1 9.2 0.2 2.2 2 0 0 2 2 2 0 NTPase AAA_5 PF07728.14 gi|73668464|ref|YP_304479.1| - 0.078 13.0 0.0 0.29 11.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) PhoH PF02562.16 gi|73668464|ref|YP_304479.1| - 0.085 12.3 0.1 0.24 10.8 0.1 1.7 1 0 0 1 1 1 0 PhoH-like protein Rad17 PF03215.15 gi|73668464|ref|YP_304479.1| - 0.096 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain T2SSE PF00437.20 gi|73668464|ref|YP_304479.1| - 0.098 11.7 0.1 0.14 11.2 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 gi|73668464|ref|YP_304479.1| - 0.11 12.4 0.5 0.18 11.7 0.5 1.3 1 0 0 1 1 1 0 NACHT domain G-alpha PF00503.20 gi|73668464|ref|YP_304479.1| - 0.13 11.4 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit ABC_tran PF00005.27 gi|73668465|ref|YP_304480.1| - 8.4e-26 91.1 0.0 1.2e-25 90.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|73668465|ref|YP_304480.1| - 3.3e-15 56.3 0.1 7.4e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_16 PF13191.6 gi|73668465|ref|YP_304480.1| - 0.00045 20.6 0.0 0.00065 20.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|73668465|ref|YP_304480.1| - 0.0016 17.9 1.7 0.034 13.6 1.7 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73668465|ref|YP_304480.1| - 0.0017 18.2 3.3 0.018 14.9 0.4 2.2 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 gi|73668465|ref|YP_304480.1| - 0.0085 15.7 0.0 0.14 11.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|73668465|ref|YP_304480.1| - 0.012 15.9 2.2 0.26 11.5 2.2 2.3 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|73668465|ref|YP_304480.1| - 0.013 15.2 0.0 0.032 14.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 gi|73668465|ref|YP_304480.1| - 0.016 15.1 0.0 0.042 13.8 0.0 1.7 2 0 0 2 2 2 0 NACHT domain NB-ARC PF00931.22 gi|73668465|ref|YP_304480.1| - 0.033 13.4 0.0 0.055 12.6 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_7 PF12775.7 gi|73668465|ref|YP_304480.1| - 0.041 13.4 0.0 0.075 12.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 gi|73668465|ref|YP_304480.1| - 0.044 13.7 0.0 0.076 12.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 gi|73668465|ref|YP_304480.1| - 0.046 13.7 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PhoH PF02562.16 gi|73668465|ref|YP_304480.1| - 0.085 12.3 0.0 0.16 11.4 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA PF00004.29 gi|73668465|ref|YP_304480.1| - 0.19 12.1 0.4 0.64 10.5 0.0 2.1 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|73668465|ref|YP_304480.1| - 0.78 9.4 3.6 6.1 6.4 0.1 2.2 1 1 0 2 2 2 0 AAA ATPase domain BPD_transp_1 PF00528.22 gi|73668466|ref|YP_304481.1| - 1.2e-17 64.2 14.9 1.2e-17 64.2 14.9 2.0 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|73668466|ref|YP_304481.1| - 2.4e-05 24.2 2.0 2.4e-05 24.2 2.0 3.7 4 1 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|73668467|ref|YP_304482.1| - 5.8e-27 94.6 7.1 5.8e-27 94.6 7.1 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|73668468|ref|YP_304483.1| - 2e-84 283.7 5.6 2.5e-84 283.4 5.6 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Glyoxalase_3 PF13468.6 gi|73668468|ref|YP_304483.1| - 0.2 11.8 0.0 0.38 10.9 0.0 1.5 1 0 0 1 1 1 0 Glyoxalase-like domain FmdE PF02663.14 gi|73668469|ref|YP_304484.1| - 1.8e-42 144.5 0.0 2.3e-42 144.2 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.17 gi|73668469|ref|YP_304484.1| - 7.8e-09 35.3 1.3 2e-08 34.0 0.9 1.9 2 0 0 2 2 2 1 Prokaryotic dksA/traR C4-type zinc finger LIM PF00412.22 gi|73668469|ref|YP_304484.1| - 0.0053 17.0 1.1 0.011 16.0 1.1 1.5 1 0 0 1 1 1 1 LIM domain OrfB_Zn_ribbon PF07282.11 gi|73668469|ref|YP_304484.1| - 0.011 15.7 0.2 0.036 14.0 0.2 2.0 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C2HC_2 PF13913.6 gi|73668469|ref|YP_304484.1| - 0.023 14.6 0.1 0.054 13.4 0.1 1.6 1 0 0 1 1 1 0 zinc-finger of a C2HC-type Zn-ribbon_8 PF09723.10 gi|73668469|ref|YP_304484.1| - 0.023 14.8 1.0 0.21 11.7 1.1 2.4 2 0 0 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|73668469|ref|YP_304484.1| - 0.077 12.4 0.3 0.63 9.5 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Auto_anti-p27 PF06677.12 gi|73668469|ref|YP_304484.1| - 0.084 13.0 1.1 0.21 11.8 1.1 1.7 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) HEAT_2 PF13646.6 gi|73668470|ref|YP_304485.1| - 1.4e-147 480.5 43.2 2.9e-21 75.7 0.5 14.1 4 4 11 15 15 15 15 HEAT repeats HEAT_PBS PF03130.16 gi|73668470|ref|YP_304485.1| - 9.7e-92 292.4 35.3 0.00014 22.2 0.1 24.8 25 0 0 25 25 25 18 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|73668470|ref|YP_304485.1| - 3.1e-80 257.2 2.5 0.00034 20.6 0.0 23.0 24 0 0 24 24 23 13 HEAT repeat HEAT_EZ PF13513.6 gi|73668470|ref|YP_304485.1| - 4.7e-60 199.4 19.7 0.0063 17.0 0.0 21.9 21 3 2 23 23 22 14 HEAT-like repeat Arm PF00514.23 gi|73668470|ref|YP_304485.1| - 9.4e-40 133.5 13.7 0.00068 19.6 0.0 17.3 12 4 7 19 19 19 7 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|73668470|ref|YP_304485.1| - 1.8e-36 125.6 12.5 0.00041 20.4 0.0 13.2 5 2 10 15 15 14 10 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|73668470|ref|YP_304485.1| - 6.6e-19 67.9 8.2 0.011 14.4 0.0 8.6 5 2 4 10 10 10 5 Adaptin N terminal region Vac14_Fab1_bd PF12755.7 gi|73668470|ref|YP_304485.1| - 8.2e-13 48.8 0.0 7.3 7.3 0.0 11.8 5 3 4 12 12 12 0 Vacuolar 14 Fab1-binding region RTP1_C1 PF10363.9 gi|73668470|ref|YP_304485.1| - 2.9e-10 40.3 0.4 2.7 8.2 0.0 7.1 3 3 1 4 4 4 2 Required for nuclear transport of RNA pol II C-terminus 1 Vitellogenin_N PF01347.22 gi|73668470|ref|YP_304485.1| - 3.8e-10 38.8 2.3 0.09 11.2 0.0 6.2 5 3 2 8 8 8 4 Lipoprotein amino terminal region RasGEF_N_2 PF14663.6 gi|73668470|ref|YP_304485.1| - 1.3e-08 35.2 9.0 0.31 11.5 0.1 8.8 5 1 3 9 9 8 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain CLASP_N PF12348.8 gi|73668470|ref|YP_304485.1| - 2.8e-08 33.6 19.0 0.16 11.5 0.2 10.9 6 4 3 11 11 11 2 CLASP N terminal Aconitase_B_N PF11791.8 gi|73668470|ref|YP_304485.1| - 2.1e-06 27.9 13.7 8.2 6.5 0.1 10.4 8 3 3 11 11 10 0 Aconitate B N-terminal domain Matrix PF00661.21 gi|73668470|ref|YP_304485.1| - 2.7e-05 23.1 0.8 0.1 11.3 0.0 3.8 3 1 1 4 4 4 2 Viral matrix protein DUF1829 PF08862.10 gi|73668470|ref|YP_304485.1| - 0.00046 20.6 1.8 2 9.0 0.0 5.3 5 1 0 5 5 3 1 Domain of unknown function DUF1829 RICTOR_M PF14666.6 gi|73668470|ref|YP_304485.1| - 0.00095 18.9 1.9 8.9 6.1 0.0 7.3 7 2 2 9 9 9 0 Rapamycin-insensitive companion of mTOR, middle domain Condensin2nSMC PF12422.8 gi|73668470|ref|YP_304485.1| - 0.0081 16.4 0.4 14 5.9 0.0 5.9 9 1 0 10 10 7 0 Condensin II non structural maintenance of chromosomes subunit ThylakoidFormat PF11264.8 gi|73668470|ref|YP_304485.1| - 0.11 12.2 0.1 0.11 12.2 0.1 6.0 4 3 2 7 7 7 0 Thylakoid formation protein TPR_15 PF13429.6 gi|73668470|ref|YP_304485.1| - 0.16 11.2 1.4 2.9 7.0 0.0 3.6 5 0 0 5 5 5 0 Tetratricopeptide repeat YmgB PF10798.8 gi|73668470|ref|YP_304485.1| - 0.18 11.6 3.6 4.5 7.2 0.0 4.6 4 0 0 4 4 4 0 Biofilm development protein YmgB/AriR PetM PF08041.11 gi|73668470|ref|YP_304485.1| - 0.82 9.3 6.0 1.3 8.6 1.6 2.7 2 0 0 2 2 2 0 PetM family of cytochrome b6f complex subunit 7 TetR_C_16 PF17920.1 gi|73668470|ref|YP_304485.1| - 4.7 7.5 6.2 30 4.9 0.0 5.1 5 1 2 7 7 7 0 Tetracyclin repressor-like, C-terminal domain HemY_N PF07219.13 gi|73668470|ref|YP_304485.1| - 6.5 7.0 6.2 23 5.3 0.3 4.1 3 1 1 4 4 4 0 HemY protein N-terminus Cohesin_HEAT PF12765.7 gi|73668470|ref|YP_304485.1| - 6.8 7.1 12.8 4.6 7.6 0.6 5.6 7 0 0 7 7 5 0 HEAT repeat associated with sister chromatid cohesion Nop52 PF05997.12 gi|73668470|ref|YP_304485.1| - 8.1 6.2 9.3 28 4.4 0.2 5.9 6 2 1 7 7 7 0 Nucleolar protein,Nop52 TIM PF00121.18 gi|73668471|ref|YP_304486.1| - 8.7e-11 41.6 0.0 1.2e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Triosephosphate isomerase ThiG PF05690.14 gi|73668471|ref|YP_304486.1| - 0.00017 21.0 0.2 0.00034 20.0 0.2 1.5 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|73668471|ref|YP_304486.1| - 0.003 17.0 0.8 0.0048 16.3 0.8 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|73668471|ref|YP_304486.1| - 0.0062 15.6 0.3 0.011 14.8 0.3 1.3 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Hydrolase_like PF13242.6 gi|73668471|ref|YP_304486.1| - 0.013 15.6 0.1 4.4 7.4 0.0 2.3 2 0 0 2 2 2 0 HAD-hyrolase-like His_biosynth PF00977.21 gi|73668471|ref|YP_304486.1| - 0.054 12.9 0.1 0.18 11.2 0.0 1.8 2 0 0 2 2 2 0 Histidine biosynthesis protein IGPS PF00218.21 gi|73668471|ref|YP_304486.1| - 0.062 12.5 0.0 0.13 11.4 0.0 1.6 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase Fae PF08714.11 gi|73668472|ref|YP_304487.1| - 1.7e-69 232.8 0.2 4e-69 231.6 0.2 1.6 1 0 0 1 1 1 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.24 gi|73668472|ref|YP_304487.1| - 1.8e-20 73.5 2.2 2.4e-19 69.8 2.5 2.3 2 1 0 2 2 2 1 Orotidine 5'-phosphate decarboxylase / HUMPS family QRPTase_C PF01729.19 gi|73668472|ref|YP_304487.1| - 0.0026 17.5 0.4 0.0084 15.9 0.2 1.9 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain Ribul_P_3_epim PF00834.19 gi|73668472|ref|YP_304487.1| - 0.0041 16.5 4.0 0.0043 16.5 1.5 2.4 2 1 0 2 2 2 1 Ribulose-phosphate 3 epimerase family DUF1887 PF09002.11 gi|73668472|ref|YP_304487.1| - 0.066 11.9 0.0 0.094 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) HhH-GPD PF00730.25 gi|73668473|ref|YP_304488.1| - 3.9e-22 78.7 0.0 5.8e-22 78.2 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|73668473|ref|YP_304488.1| - 1.5e-09 37.2 0.3 2.2e-08 33.5 0.0 2.8 3 1 0 3 3 3 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|73668473|ref|YP_304488.1| - 0.00093 19.8 0.1 0.74 10.5 0.0 2.5 1 1 2 3 3 3 3 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|73668473|ref|YP_304488.1| - 0.016 15.3 0.0 8.6 6.5 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix motif DUF1409 PF07197.12 gi|73668473|ref|YP_304488.1| - 0.079 12.9 0.0 0.2 11.5 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1409) DUF2400 PF09674.10 gi|73668473|ref|YP_304488.1| - 0.092 12.7 0.0 0.3 11.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) Yip1 PF04893.17 gi|73668474|ref|YP_304489.1| - 1.4e-22 80.3 24.6 1.4e-22 80.3 24.6 1.9 1 1 1 2 2 2 1 Yip1 domain Ferritin PF00210.24 gi|73668477|ref|YP_304492.1| - 7.6e-06 25.9 0.1 8.7e-06 25.7 0.1 1.0 1 0 0 1 1 1 1 Ferritin-like domain Ferritin PF00210.24 gi|73668478|ref|YP_304493.1| - 2.5e-08 33.9 0.1 3e-08 33.7 0.1 1.1 1 0 0 1 1 1 1 Ferritin-like domain PilJ_C PF18223.1 gi|73668478|ref|YP_304493.1| - 0.053 14.0 0.2 0.07 13.6 0.2 1.2 1 0 0 1 1 1 0 Pili PilJ C-terminal domain DUF2383 PF09537.10 gi|73668478|ref|YP_304493.1| - 0.056 13.8 0.1 0.071 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2383) HMGL-like PF00682.19 gi|73668479|ref|YP_304494.1| - 1.6e-85 286.8 1.8 1.6e-85 286.8 1.8 1.6 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 gi|73668479|ref|YP_304494.1| - 1.6e-35 121.9 1.6 3.1e-35 121.0 1.6 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain TatD_DNase PF01026.21 gi|73668480|ref|YP_304495.1| - 5.5e-65 219.3 0.0 6.3e-65 219.1 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.14 gi|73668480|ref|YP_304495.1| - 0.0011 18.8 0.1 0.0021 17.9 0.1 1.7 1 1 0 1 1 1 1 Amidohydrolase AP_endonuc_2 PF01261.24 gi|73668480|ref|YP_304495.1| - 0.096 12.1 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Lactamase_B PF00753.27 gi|73668481|ref|YP_304496.1| - 9.8e-28 97.5 0.3 1.2e-27 97.2 0.3 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|73668481|ref|YP_304496.1| - 3.5e-07 29.9 0.0 5e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|73668481|ref|YP_304496.1| - 0.0053 16.2 0.2 0.0077 15.7 0.2 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Radical_SAM_N PF08497.10 gi|73668482|ref|YP_304497.1| - 1.2e-126 421.9 0.0 1.9e-126 421.3 0.0 1.3 1 0 0 1 1 1 1 Radical SAM N-terminal DUF3362 PF11842.8 gi|73668482|ref|YP_304497.1| - 1.2e-32 113.3 5.6 6.3e-32 111.0 0.1 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF3362) Radical_SAM PF04055.21 gi|73668482|ref|YP_304497.1| - 2.5e-17 63.7 2.0 3.1e-16 60.2 0.6 3.0 3 0 0 3 3 3 1 Radical SAM superfamily B12-binding PF02310.19 gi|73668482|ref|YP_304497.1| - 0.00015 21.7 0.0 2 8.5 0.0 3.6 4 0 0 4 4 4 2 B12 binding domain EPL1 PF10513.9 gi|73668482|ref|YP_304497.1| - 0.0024 18.3 1.5 0.12 12.8 3.7 2.1 2 0 0 2 2 2 1 Enhancer of polycomb-like Fmp27 PF10344.9 gi|73668482|ref|YP_304497.1| - 6 4.8 6.7 8.5 4.3 6.7 1.1 1 0 0 1 1 1 0 Mitochondrial protein from FMP27 DUF1837 PF08878.11 gi|73668483|ref|YP_304498.1| - 0.022 14.6 0.0 0.028 14.2 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1837) Bin3 PF06859.12 gi|73668483|ref|YP_304498.1| - 0.043 14.4 0.1 2.1 9.0 0.0 2.3 2 0 0 2 2 2 0 Bicoid-interacting protein 3 (Bin3) DEAD PF00270.29 gi|73668484|ref|YP_304499.1| - 3e-16 59.7 0.0 7.1e-16 58.5 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|73668484|ref|YP_304499.1| - 9e-10 38.8 0.0 3.9e-09 36.7 0.0 2.0 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|73668484|ref|YP_304499.1| - 7.2e-08 32.8 0.0 5.3e-07 30.0 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 gi|73668484|ref|YP_304499.1| - 0.1 12.9 4.8 0.19 12.0 0.0 3.5 4 0 0 4 4 4 0 AAA domain CCG PF02754.16 gi|73668487|ref|YP_304502.1| - 8.4e-35 118.9 2.1 3.6e-16 59.2 0.1 2.6 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_17 PF13534.6 gi|73668487|ref|YP_304502.1| - 2.8e-10 40.6 2.9 2.8e-10 40.6 2.9 3.0 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73668487|ref|YP_304502.1| - 2.8e-10 40.5 3.2 2.8e-10 40.5 3.2 2.7 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668487|ref|YP_304502.1| - 3.4e-07 30.7 5.1 3.4e-07 30.7 5.1 2.7 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668487|ref|YP_304502.1| - 4.1e-05 24.4 12.8 0.014 16.3 0.7 3.5 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|73668487|ref|YP_304502.1| - 4.9e-05 23.4 20.6 0.00036 20.7 11.6 3.5 3 1 2 5 5 5 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668487|ref|YP_304502.1| - 0.00035 20.5 2.8 0.00035 20.5 2.8 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4 PF00037.27 gi|73668487|ref|YP_304502.1| - 0.00054 19.7 21.4 0.0047 16.7 3.4 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73668487|ref|YP_304502.1| - 0.0025 17.9 19.1 0.0044 17.1 13.3 3.5 3 1 1 4 4 4 2 4Fe-4S dicluster domain UPF0004 PF00919.20 gi|73668487|ref|YP_304502.1| - 0.0036 17.3 0.1 1.1 9.3 0.1 2.9 2 1 1 3 3 3 1 Uncharacterized protein family UPF0004 Fer4_4 PF12800.7 gi|73668487|ref|YP_304502.1| - 0.0039 17.6 2.6 0.0039 17.6 2.6 3.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73668487|ref|YP_304502.1| - 0.0087 16.3 8.8 0.5 10.6 0.8 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73668487|ref|YP_304502.1| - 0.01 16.0 0.6 0.01 16.0 0.6 3.7 4 0 0 4 4 4 0 4Fe-4S dicluster domain Eapp_C PF10238.9 gi|73668487|ref|YP_304502.1| - 0.022 14.8 4.7 0.11 12.5 1.2 2.8 3 0 0 3 3 3 0 E2F-associated phosphoprotein Tetraspanin PF00335.20 gi|73668487|ref|YP_304502.1| - 0.098 12.4 1.3 5.5 6.6 0.0 2.4 2 1 0 2 2 2 0 Tetraspanin family PUMA PF15826.5 gi|73668487|ref|YP_304502.1| - 0.15 12.2 0.3 1.3 9.1 0.3 2.2 1 1 0 1 1 1 0 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis Fer4_20 PF14691.6 gi|73668487|ref|YP_304502.1| - 4.9 7.0 11.1 4.9 6.9 0.2 2.8 3 0 0 3 3 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FAD-oxidase_C PF02913.19 gi|73668488|ref|YP_304503.1| - 3.3e-57 194.0 0.0 4.4e-57 193.6 0.0 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|73668488|ref|YP_304503.1| - 4.4e-47 159.3 0.1 7.9e-47 158.5 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain DUF1828 PF08861.10 gi|73668489|ref|YP_304504.1| - 1.3e-21 76.7 0.0 2.4e-21 75.8 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function DUF1828 DASH_Dam1 PF08653.10 gi|73668491|ref|YP_304506.1| - 0.096 12.5 0.1 0.096 12.5 0.1 2.0 2 0 0 2 2 2 0 DASH complex subunit Dam1 HypA PF01155.19 gi|73668492|ref|YP_304507.1| - 9.1e-05 22.5 1.1 0.00013 22.0 1.1 1.4 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|73668492|ref|YP_304507.1| - 0.0001 22.4 0.5 0.0002 21.4 0.5 1.6 1 1 0 1 1 1 1 Zinc ribbon domain Zn_ribbon_SprT PF17283.2 gi|73668492|ref|YP_304507.1| - 0.0027 17.6 0.5 0.0088 15.9 0.5 1.8 1 1 0 1 1 1 1 SprT-like zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|73668492|ref|YP_304507.1| - 0.0045 16.9 1.0 0.014 15.4 1.1 1.8 1 1 1 2 2 2 2 zinc-ribbons zf-ribbon_3 PF13248.6 gi|73668492|ref|YP_304507.1| - 0.0081 15.5 1.8 0.44 10.0 0.2 2.3 2 0 0 2 2 2 1 zinc-ribbon domain zf-CSL PF05207.13 gi|73668492|ref|YP_304507.1| - 0.011 15.4 1.1 0.016 14.9 1.0 1.4 1 1 0 1 1 1 0 CSL zinc finger PhnA_Zn_Ribbon PF08274.12 gi|73668492|ref|YP_304507.1| - 0.012 15.6 1.0 0.81 9.7 0.2 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon DUF2072 PF09845.9 gi|73668492|ref|YP_304507.1| - 0.012 15.9 0.7 0.021 15.1 0.7 1.5 1 1 0 1 1 1 0 Zn-ribbon containing protein zf-H2C2_2 PF13465.6 gi|73668492|ref|YP_304507.1| - 0.024 15.1 1.6 1.7 9.2 0.3 2.3 2 0 0 2 2 2 0 Zinc-finger double domain UPF0547 PF10571.9 gi|73668492|ref|YP_304507.1| - 0.025 14.7 1.2 6.5 6.9 0.2 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-C4_Topoisom PF01396.19 gi|73668492|ref|YP_304507.1| - 0.033 14.0 1.7 0.91 9.4 0.1 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-TFIIB PF13453.6 gi|73668492|ref|YP_304507.1| - 0.04 13.3 1.4 3.2 7.2 0.1 2.5 2 0 0 2 2 2 0 Transcription factor zinc-finger DNA_ligase_ZBD PF03119.16 gi|73668492|ref|YP_304507.1| - 0.051 13.6 2.1 0.55 10.3 0.1 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain GcpE PF04551.14 gi|73668492|ref|YP_304507.1| - 0.051 12.7 0.3 0.066 12.3 0.3 1.3 1 1 0 1 1 1 0 GcpE protein Elf1 PF05129.13 gi|73668492|ref|YP_304507.1| - 0.053 13.6 1.1 6.8 6.8 0.1 2.1 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zf-IS66 PF13005.7 gi|73668492|ref|YP_304507.1| - 0.053 13.9 1.0 0.32 11.4 0.1 2.3 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 DZR PF12773.7 gi|73668492|ref|YP_304507.1| - 0.069 13.2 2.4 0.9 9.6 2.6 1.9 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_4 PF13717.6 gi|73668492|ref|YP_304507.1| - 0.074 13.0 1.2 9.1 6.3 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|73668492|ref|YP_304507.1| - 0.1 12.3 0.4 15 5.3 0.0 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|73668492|ref|YP_304507.1| - 0.1 12.6 2.5 2.7 8.0 0.1 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|73668492|ref|YP_304507.1| - 0.11 12.2 4.5 0.73 9.6 0.6 2.4 2 0 0 2 2 2 0 zinc-ribbon domain YacG PF03884.14 gi|73668492|ref|YP_304507.1| - 0.14 11.9 1.3 13 5.6 0.1 2.3 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG CpXC PF14353.6 gi|73668492|ref|YP_304507.1| - 0.14 12.2 3.6 6.3 6.9 0.3 2.3 1 1 1 2 2 2 0 CpXC protein zf_UBZ PF18439.1 gi|73668492|ref|YP_304507.1| - 0.15 11.6 0.7 6.4 6.5 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Trm112p PF03966.16 gi|73668492|ref|YP_304507.1| - 0.16 12.6 2.0 0.24 12.0 0.4 1.9 2 0 0 2 2 2 0 Trm112p-like protein zinc_ribbon_9 PF14369.6 gi|73668492|ref|YP_304507.1| - 0.21 11.9 4.0 3.7 7.9 0.3 2.2 1 1 1 2 2 2 0 zinc-ribbon zinc_ribbon_5 PF13719.6 gi|73668492|ref|YP_304507.1| - 0.25 11.1 1.8 4.5 7.1 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2 PF00096.26 gi|73668492|ref|YP_304507.1| - 0.41 11.2 3.1 3.4 8.3 0.4 2.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-HYPF PF07503.12 gi|73668492|ref|YP_304507.1| - 0.46 10.3 5.7 10 6.0 5.7 2.2 1 1 0 1 1 1 0 HypF finger TF_Zn_Ribbon PF08271.12 gi|73668492|ref|YP_304507.1| - 0.55 9.8 7.2 0.62 9.6 4.6 2.3 2 1 0 2 2 1 0 TFIIB zinc-binding Cys_rich_KTR PF14205.6 gi|73668492|ref|YP_304507.1| - 1 9.2 9.9 1.7 8.5 0.6 3.0 1 1 2 3 3 3 0 Cysteine-rich KTR zf-ACC PF17848.1 gi|73668492|ref|YP_304507.1| - 1.3 9.2 0.1 1.3 9.2 0.1 3.2 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain DUF5591 PF17884.1 gi|73668493|ref|YP_304508.1| - 1.1e-61 207.2 0.1 1.9e-61 206.5 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) TGT PF01702.18 gi|73668493|ref|YP_304508.1| - 6e-16 58.5 0.0 6e-15 55.2 0.0 2.4 3 0 0 3 3 3 1 Queuine tRNA-ribosyltransferase PUA PF01472.20 gi|73668493|ref|YP_304508.1| - 1.2e-13 50.8 0.2 2.7e-13 49.7 0.2 1.7 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.6 gi|73668493|ref|YP_304508.1| - 1.3e-12 47.6 0.0 2.7e-12 46.6 0.0 1.6 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase Acetyltransf_1 PF00583.25 gi|73668494|ref|YP_304509.1| - 6e-19 68.4 0.3 8.2e-19 68.0 0.3 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|73668494|ref|YP_304509.1| - 6.7e-15 55.2 0.1 9e-15 54.7 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73668494|ref|YP_304509.1| - 4.2e-14 52.7 0.8 7.2e-14 52.0 0.8 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73668494|ref|YP_304509.1| - 8.7e-08 32.0 0.0 1.3e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|73668494|ref|YP_304509.1| - 1.1e-07 32.6 0.1 1.9e-07 31.8 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73668494|ref|YP_304509.1| - 1.5e-06 28.3 0.0 5.8e-05 23.2 0.0 2.4 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73668494|ref|YP_304509.1| - 1.3e-05 25.2 0.0 2.2e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 gi|73668494|ref|YP_304509.1| - 2.5e-05 24.5 0.1 3.9e-05 23.8 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|73668494|ref|YP_304509.1| - 0.0008 19.6 0.0 0.0011 19.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|73668494|ref|YP_304509.1| - 0.00099 18.8 0.0 0.0069 16.1 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|73668494|ref|YP_304509.1| - 0.0018 17.9 0.0 0.0023 17.5 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_15 PF17013.5 gi|73668494|ref|YP_304509.1| - 0.061 12.8 0.0 0.092 12.2 0.0 1.5 1 1 0 1 1 1 0 Putative acetyl-transferase UPF0058 PF01893.16 gi|73668495|ref|YP_304510.1| - 5.9e-30 103.4 0.6 6.7e-30 103.2 0.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 TRP_2 PF08344.11 gi|73668495|ref|YP_304510.1| - 0.15 12.3 0.0 0.34 11.2 0.0 1.7 2 0 0 2 2 2 0 Transient receptor ion channel II Toprim_4 PF13662.6 gi|73668496|ref|YP_304511.1| - 1.6e-11 44.5 0.1 5.6e-11 42.8 0.1 2.0 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|73668496|ref|YP_304511.1| - 6.2e-05 23.3 0.0 0.00019 21.8 0.0 1.8 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|73668496|ref|YP_304511.1| - 0.038 14.2 0.3 0.22 11.8 0.1 2.5 2 2 0 2 2 2 0 Toprim domain Pyr_redox_2 PF07992.14 gi|73668497|ref|YP_304512.1| - 3.1e-44 151.4 0.1 4.4e-44 150.9 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|73668497|ref|YP_304512.1| - 2.4e-19 69.7 3.5 5.3e-15 55.7 0.1 3.8 3 1 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|73668497|ref|YP_304512.1| - 8.7e-12 44.9 0.0 1.8e-06 27.4 0.0 3.0 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|73668497|ref|YP_304512.1| - 5.2e-11 42.8 0.0 1.2e-10 41.6 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HI0933_like PF03486.14 gi|73668497|ref|YP_304512.1| - 1.2e-09 37.4 0.1 0.028 13.1 0.1 3.3 3 0 0 3 3 3 3 HI0933-like protein DAO PF01266.24 gi|73668497|ref|YP_304512.1| - 3.7e-08 33.3 1.7 0.015 14.9 0.4 3.3 3 0 0 3 3 3 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|73668497|ref|YP_304512.1| - 1.7e-07 30.7 0.8 0.0021 17.2 0.0 3.0 3 0 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 gi|73668497|ref|YP_304512.1| - 3.4e-07 30.4 3.0 0.0019 18.4 0.1 2.9 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|73668497|ref|YP_304512.1| - 1.8e-06 27.4 0.2 0.025 13.8 0.0 2.3 2 0 0 2 2 2 2 Thi4 family Shikimate_DH PF01488.20 gi|73668497|ref|YP_304512.1| - 1.9e-06 28.0 0.2 0.013 15.5 0.0 2.4 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase GIDA PF01134.22 gi|73668497|ref|YP_304512.1| - 2.2e-06 27.0 0.1 0.0012 18.0 0.0 3.0 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|73668497|ref|YP_304512.1| - 2.2e-06 27.2 0.2 0.0012 18.2 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain Sacchrp_dh_NADP PF03435.18 gi|73668497|ref|YP_304512.1| - 2.3e-05 24.6 1.0 0.0016 18.7 0.2 2.5 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 gi|73668497|ref|YP_304512.1| - 2.4e-05 24.0 0.0 0.033 13.9 0.0 2.4 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA ThiF PF00899.21 gi|73668497|ref|YP_304512.1| - 0.00018 21.0 0.2 0.005 16.2 0.2 2.2 2 0 0 2 2 2 1 ThiF family 2-Hacid_dh_C PF02826.19 gi|73668497|ref|YP_304512.1| - 0.00022 20.6 0.1 0.08 12.3 0.0 2.3 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|73668497|ref|YP_304512.1| - 0.00025 21.3 0.7 0.29 11.4 0.1 2.5 2 0 0 2 2 2 2 TrkA-N domain 3HCDH_N PF02737.18 gi|73668497|ref|YP_304512.1| - 0.00074 19.4 0.1 0.025 14.4 0.0 2.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|73668497|ref|YP_304512.1| - 0.0013 18.4 1.1 0.0038 16.8 0.0 2.1 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 gi|73668497|ref|YP_304512.1| - 0.0013 19.1 0.1 1.8 9.0 0.0 2.4 2 0 0 2 2 2 2 Putative NAD(P)-binding NAD_binding_9 PF13454.6 gi|73668497|ref|YP_304512.1| - 0.0022 18.0 2.0 1.5 8.8 0.0 3.9 3 1 1 4 4 4 1 FAD-NAD(P)-binding F420_oxidored PF03807.17 gi|73668497|ref|YP_304512.1| - 0.0031 18.1 0.4 2.9 8.6 0.0 2.7 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Lycopene_cycl PF05834.12 gi|73668497|ref|YP_304512.1| - 0.005 15.9 0.4 0.57 9.2 0.0 2.6 3 0 0 3 3 3 1 Lycopene cyclase protein PglD_N PF17836.1 gi|73668497|ref|YP_304512.1| - 0.0071 17.0 1.3 0.35 11.5 0.0 3.0 3 0 0 3 3 3 1 PglD N-terminal domain NAD_Gly3P_dh_N PF01210.23 gi|73668497|ref|YP_304512.1| - 0.0073 16.3 0.4 5 7.1 0.1 2.8 2 1 1 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AlaDh_PNT_C PF01262.21 gi|73668497|ref|YP_304512.1| - 0.0086 15.4 0.0 1.7 7.9 0.0 2.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 gi|73668497|ref|YP_304512.1| - 0.019 14.3 1.6 0.11 11.9 0.3 2.2 2 0 0 2 2 2 0 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|73668497|ref|YP_304512.1| - 0.023 13.6 0.6 0.37 9.6 0.0 2.3 2 0 0 2 2 2 0 Tryptophan halogenase RTC PF01137.21 gi|73668498|ref|YP_304513.1| - 2.7e-84 281.8 0.0 3.1e-84 281.6 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|73668498|ref|YP_304513.1| - 2.1e-11 44.3 0.0 3.7e-11 43.5 0.0 1.4 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain PTS_2-RNA PF01885.16 gi|73668499|ref|YP_304514.1| - 1.4e-22 80.6 0.0 1.8e-22 80.3 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Phlebovirus_G1 PF07243.11 gi|73668499|ref|YP_304514.1| - 0.032 12.6 0.0 0.041 12.2 0.0 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 tRNA_anti-codon PF01336.25 gi|73668500|ref|YP_304515.1| - 5.6e-31 106.4 10.4 1.7e-07 31.1 0.2 4.4 4 0 0 4 4 4 4 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 gi|73668500|ref|YP_304515.1| - 5.4e-21 75.3 4.5 4.1e-05 23.4 0.1 4.1 4 0 0 4 4 4 4 Cell division control protein 24, OB domain 3 REPA_OB_2 PF16900.5 gi|73668500|ref|YP_304515.1| - 1e-14 54.2 4.6 0.0058 16.5 0.0 4.4 4 0 0 4 4 4 4 Replication protein A OB domain POT1PC PF16686.5 gi|73668500|ref|YP_304515.1| - 5.3e-05 23.1 0.1 0.27 11.1 0.0 3.8 4 0 0 4 4 4 2 ssDNA-binding domain of telomere protection protein Rep_fac-A_C PF08646.10 gi|73668500|ref|YP_304515.1| - 0.0001 22.1 1.1 12 5.6 0.1 4.2 4 0 0 4 4 4 2 Replication factor-A C terminal domain DUF3127 PF11325.8 gi|73668500|ref|YP_304515.1| - 0.00015 21.9 4.0 0.33 11.2 0.1 4.5 4 1 0 4 4 4 2 Domain of unknown function (DUF3127) RecG_wedge PF17191.4 gi|73668500|ref|YP_304515.1| - 0.0063 16.1 3.1 0.12 12.0 0.2 3.2 3 0 0 3 3 3 1 RecG wedge domain T2SS-T3SS_pil_N PF13629.6 gi|73668500|ref|YP_304515.1| - 0.76 9.5 6.3 13 5.6 0.1 4.2 5 0 0 5 5 5 0 Pilus formation protein N terminal region CBS PF00571.28 gi|73668501|ref|YP_304516.1| - 2.4e-19 69.5 7.1 9e-12 45.3 0.6 2.4 2 0 0 2 2 2 2 CBS domain CBS PF00571.28 gi|73668502|ref|YP_304517.1| - 1.3e-41 140.8 12.5 1.7e-10 41.1 0.0 4.1 4 0 0 4 4 4 4 CBS domain DUF4550 PF15084.6 gi|73668502|ref|YP_304517.1| - 0.18 12.2 0.8 3.6 8.1 0.2 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4550) IF3_N PF05198.16 gi|73668502|ref|YP_304517.1| - 3.5 8.0 6.7 12 6.3 0.1 3.8 4 1 0 4 4 4 0 Translation initiation factor IF-3, N-terminal domain CBS PF00571.28 gi|73668503|ref|YP_304518.1| - 3.1e-50 168.4 7.5 5.5e-13 49.2 0.1 4.2 4 0 0 4 4 4 4 CBS domain CBS PF00571.28 gi|73668504|ref|YP_304519.1| - 9.7e-49 163.7 18.5 5.8e-14 52.3 0.3 4.1 4 0 0 4 4 4 4 CBS domain CBS PF00571.28 gi|73668505|ref|YP_304520.1| - 1.9e-40 137.1 10.6 5.8e-11 42.7 0.2 4.1 4 0 0 4 4 4 4 CBS domain AIM24 PF01987.17 gi|73668506|ref|YP_304521.1| - 6.9e-68 228.4 0.4 8.3e-68 228.1 0.4 1.1 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Lig_C PF18330.1 gi|73668507|ref|YP_304522.1| - 2.6e-46 156.7 0.1 5.6e-46 155.6 0.1 1.6 1 0 0 1 1 1 1 Ligase Pab1020 C-terminal region RNA_ligase PF09414.10 gi|73668507|ref|YP_304522.1| - 2.9e-20 73.2 0.1 4.7e-20 72.5 0.1 1.3 1 0 0 1 1 1 1 RNA ligase DNA_ligase_A_M PF01068.21 gi|73668507|ref|YP_304522.1| - 6e-09 35.8 0.2 4.8e-07 29.6 0.2 2.3 1 1 0 1 1 1 1 ATP dependent DNA ligase domain DUF587 PF04532.12 gi|73668507|ref|YP_304522.1| - 0.053 12.8 0.0 0.12 11.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF587) TusA PF01206.17 gi|73668507|ref|YP_304522.1| - 0.14 12.0 0.2 15 5.5 0.0 2.8 3 0 0 3 3 3 0 Sulfurtransferase TusA GTP_EFTU PF00009.27 gi|73668508|ref|YP_304523.1| - 0.0073 15.9 0.2 0.032 13.8 0.0 1.9 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|73668508|ref|YP_304523.1| - 0.0098 16.3 1.4 0.039 14.3 0.4 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 F420_oxidored PF03807.17 gi|73668508|ref|YP_304523.1| - 0.078 13.6 0.0 0.23 12.1 0.0 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent TRPM_tetra PF16519.5 gi|73668508|ref|YP_304523.1| - 0.093 12.8 0.0 0.74 10.0 0.0 2.3 2 0 0 2 2 2 0 Tetramerisation domain of TRPM GGACT PF06094.12 gi|73668509|ref|YP_304524.1| - 1.3e-15 58.1 0.1 1.7e-15 57.7 0.1 1.2 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AP_endonuc_2 PF01261.24 gi|73668510|ref|YP_304525.1| - 2.9e-29 102.0 0.0 3.8e-29 101.7 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel CytadhesinP1 PF12378.8 gi|73668510|ref|YP_304525.1| - 0.083 13.1 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 Trypsin-sensitive surface-exposed protein RNA_binding PF01877.17 gi|73668511|ref|YP_304526.1| - 4.3e-18 65.7 0.0 5.7e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 RNA binding 3-dmu-9_3-mt PF06983.13 gi|73668511|ref|YP_304526.1| - 0.14 12.7 0.0 0.29 11.7 0.0 1.5 2 0 0 2 2 2 0 3-demethylubiquinone-9 3-methyltransferase AAA_17 PF13207.6 gi|73668512|ref|YP_304527.1| - 2.5e-17 63.5 0.1 3.5e-17 63.1 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|73668512|ref|YP_304527.1| - 1.2e-12 48.5 0.0 1.7e-12 48.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|73668512|ref|YP_304527.1| - 6e-05 23.2 0.0 8e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain ADK PF00406.22 gi|73668512|ref|YP_304527.1| - 0.003 17.7 0.1 0.0035 17.4 0.1 1.3 1 1 0 1 1 1 1 Adenylate kinase CPT PF07931.12 gi|73668512|ref|YP_304527.1| - 0.011 15.6 1.1 0.032 14.1 1.1 1.9 1 1 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PEP-utilizers PF00391.23 gi|73668512|ref|YP_304527.1| - 0.074 12.8 3.1 0.46 10.2 3.1 2.1 1 1 0 1 1 1 0 PEP-utilising enzyme, mobile domain CoaE PF01121.20 gi|73668512|ref|YP_304527.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Dephospho-CoA kinase Cdc6_C PF09079.11 gi|73668513|ref|YP_304528.1| - 3.4e-23 81.4 0.5 7.9e-23 80.2 0.5 1.7 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|73668513|ref|YP_304528.1| - 6.7e-13 49.1 0.2 4.5e-12 46.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|73668513|ref|YP_304528.1| - 1.5e-09 38.5 0.6 3.7e-08 33.9 0.1 2.5 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|73668513|ref|YP_304528.1| - 2.6e-09 37.6 0.0 6.4e-09 36.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|73668513|ref|YP_304528.1| - 2e-08 33.8 0.9 1.4e-06 27.9 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|73668513|ref|YP_304528.1| - 1.4e-06 28.4 1.3 4.3e-06 26.8 1.3 1.8 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea KAP_NTPase PF07693.14 gi|73668513|ref|YP_304528.1| - 1.3e-05 24.7 0.9 0.015 14.6 0.0 2.2 1 1 1 2 2 2 2 KAP family P-loop domain DEAD PF00270.29 gi|73668513|ref|YP_304528.1| - 0.00013 21.7 0.7 1.1 8.9 0.0 3.2 3 0 0 3 3 3 2 DEAD/DEAH box helicase NACHT PF05729.12 gi|73668513|ref|YP_304528.1| - 0.00014 21.8 0.0 0.00035 20.5 0.0 1.6 1 0 0 1 1 1 1 NACHT domain Sigma54_activat PF00158.26 gi|73668513|ref|YP_304528.1| - 0.00036 20.3 0.0 0.00079 19.2 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|73668513|ref|YP_304528.1| - 0.00055 19.7 0.2 0.04 13.7 0.0 2.7 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 gi|73668513|ref|YP_304528.1| - 0.0011 18.1 0.2 0.0042 16.3 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 gi|73668513|ref|YP_304528.1| - 0.0019 18.7 0.0 0.0043 17.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 gi|73668513|ref|YP_304528.1| - 0.0029 16.9 0.0 0.0042 16.4 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) TsaE PF02367.17 gi|73668513|ref|YP_304528.1| - 0.008 16.2 0.2 0.026 14.5 0.0 1.9 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Bac_DnaA PF00308.18 gi|73668513|ref|YP_304528.1| - 0.014 15.2 0.4 0.12 12.2 0.4 2.1 1 1 0 1 1 1 0 Bacterial dnaA protein AAA_7 PF12775.7 gi|73668513|ref|YP_304528.1| - 0.023 14.2 0.0 0.04 13.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_2 PF07724.14 gi|73668513|ref|YP_304528.1| - 0.033 14.3 1.5 0.27 11.3 1.5 2.2 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_24 PF13479.6 gi|73668513|ref|YP_304528.1| - 0.033 13.9 0.0 0.06 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|73668513|ref|YP_304528.1| - 0.041 13.9 0.1 0.087 12.8 0.1 1.6 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit RNA_helicase PF00910.22 gi|73668513|ref|YP_304528.1| - 0.058 13.8 0.0 0.15 12.5 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Zeta_toxin PF06414.12 gi|73668513|ref|YP_304528.1| - 0.066 12.5 1.1 0.19 11.0 0.0 2.2 3 0 0 3 3 3 0 Zeta toxin IstB_IS21 PF01695.17 gi|73668513|ref|YP_304528.1| - 0.071 12.8 0.1 0.7 9.6 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_19 PF13245.6 gi|73668513|ref|YP_304528.1| - 0.073 13.4 0.2 0.2 12.0 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|73668513|ref|YP_304528.1| - 0.1 12.6 0.5 0.52 10.3 0.5 2.3 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.18 gi|73668513|ref|YP_304528.1| - 0.28 10.5 1.7 0.77 9.1 0.0 2.3 3 0 0 3 3 3 0 FtsK/SpoIIIE family Pyridoxal_deC PF00282.19 gi|73668514|ref|YP_304529.1| - 2.1e-31 109.0 0.0 3e-31 108.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|73668514|ref|YP_304529.1| - 1.9e-09 36.9 0.1 6.3e-09 35.3 0.1 1.9 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|73668514|ref|YP_304529.1| - 1.3e-06 27.9 0.0 1.6e-05 24.3 0.0 2.0 1 1 0 1 1 1 1 Aminotransferase class I and II CBS PF00571.28 gi|73668515|ref|YP_304530.1| - 8.6e-25 87.0 6.0 2.2e-13 50.4 1.3 2.4 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.22 gi|73668515|ref|YP_304530.1| - 1.1e-14 54.3 8.1 3.2e-08 33.1 0.4 3.2 1 1 1 2 2 2 2 Peptidase family M50 Peptidase_M50B PF13398.6 gi|73668515|ref|YP_304530.1| - 3.5e-05 23.5 4.6 4.3e-05 23.2 3.2 1.9 1 1 1 2 2 2 1 Peptidase M50B-like DUF3267 PF11667.8 gi|73668515|ref|YP_304530.1| - 0.016 15.4 2.9 0.016 15.4 2.9 2.2 3 0 0 3 3 3 0 Putative zincin peptidase TetR_C_17 PF17922.1 gi|73668515|ref|YP_304530.1| - 0.12 12.5 0.0 0.23 11.6 0.0 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF2689 PF10894.8 gi|73668515|ref|YP_304530.1| - 0.98 9.2 3.4 6.3 6.6 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2689) TraB PF01963.17 gi|73668516|ref|YP_304531.1| - 9.7e-35 120.7 0.0 1.9e-34 119.7 0.0 1.4 1 0 0 1 1 1 1 TraB family ABC2_membrane_3 PF12698.7 gi|73668516|ref|YP_304531.1| - 0.73 8.9 8.0 1.3 8.0 8.0 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein FTR_C PF02741.15 gi|73668517|ref|YP_304532.1| - 5.4e-67 224.4 2.3 5.4e-67 224.4 2.3 1.8 2 0 0 2 2 2 1 FTR, proximal lobe FTR PF01913.18 gi|73668517|ref|YP_304532.1| - 2.3e-64 215.6 2.3 2.9e-64 215.3 0.2 2.0 2 1 0 2 2 2 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase CheD PF03975.13 gi|73668518|ref|YP_304533.1| - 2.5e-31 108.0 0.0 3.5e-31 107.5 0.0 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheR PF01739.18 gi|73668519|ref|YP_304534.1| - 6.2e-57 192.2 0.2 8.3e-57 191.8 0.2 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.15 gi|73668519|ref|YP_304534.1| - 1.2e-13 50.5 0.1 5.4e-13 48.4 0.1 2.1 2 0 0 2 2 2 1 CheR methyltransferase, all-alpha domain Methyltransf_31 PF13847.6 gi|73668519|ref|YP_304534.1| - 2.8e-05 24.0 0.6 9.7e-05 22.2 0.6 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668519|ref|YP_304534.1| - 7.2e-05 23.5 1.6 0.00021 22.0 0.3 2.3 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668519|ref|YP_304534.1| - 0.0078 16.9 0.1 0.66 10.7 0.1 2.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73668519|ref|YP_304534.1| - 0.13 12.9 0.1 2.1 9.0 0.1 2.4 1 1 0 1 1 1 0 Methyltransferase domain CheW PF01584.19 gi|73668520|ref|YP_304535.1| - 2.5e-24 85.5 0.6 1.3e-23 83.1 0.4 2.1 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.26 gi|73668520|ref|YP_304535.1| - 8.8e-19 68.1 0.3 2.2e-18 66.8 0.3 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Hpt PF01627.23 gi|73668520|ref|YP_304535.1| - 1.4e-17 63.7 0.2 1.5e-16 60.4 0.0 2.3 2 0 0 2 2 2 1 Hpt domain H-kinase_dim PF02895.14 gi|73668520|ref|YP_304535.1| - 1e-13 51.4 2.4 5e-13 49.2 2.4 2.2 1 0 0 1 1 1 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.6 gi|73668520|ref|YP_304535.1| - 0.0012 18.7 0.0 0.0032 17.3 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|73668520|ref|YP_304535.1| - 0.016 15.1 0.2 0.071 13.0 0.2 2.1 1 1 0 1 1 1 0 GHKL domain Orthopox_F6 PF06601.12 gi|73668520|ref|YP_304535.1| - 0.03 14.5 1.3 0.059 13.5 0.2 2.2 2 0 0 2 2 2 0 Orthopoxvirus F6 protein Snf7 PF03357.21 gi|73668520|ref|YP_304535.1| - 0.036 13.6 0.1 0.036 13.6 0.1 2.6 2 0 0 2 2 2 0 Snf7 FliG_C PF01706.16 gi|73668520|ref|YP_304535.1| - 0.038 14.2 0.2 0.038 14.2 0.2 2.4 2 1 1 3 3 3 0 FliG C-terminal domain HATPase_c_2 PF13581.6 gi|73668520|ref|YP_304535.1| - 0.092 12.7 0.1 0.32 11.0 0.0 1.9 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain RWD PF05773.22 gi|73668520|ref|YP_304535.1| - 0.53 10.6 4.1 1.1 9.5 1.5 2.8 3 1 0 3 3 3 0 RWD domain CheB_methylest PF01339.17 gi|73668521|ref|YP_304536.1| - 4.2e-59 199.1 1.2 6.7e-59 198.4 0.2 1.9 3 0 0 3 3 3 1 CheB methylesterase Response_reg PF00072.24 gi|73668521|ref|YP_304536.1| - 7.8e-20 71.1 0.0 2.9e-19 69.3 0.0 1.9 2 0 0 2 2 2 1 Response regulator receiver domain Response_reg PF00072.24 gi|73668522|ref|YP_304537.1| - 5.1e-27 94.3 3.5 5.7e-27 94.1 3.5 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Peptidase_M29 PF02073.15 gi|73668522|ref|YP_304537.1| - 0.026 13.3 0.0 1.1 8.0 0.0 2.0 1 1 1 2 2 2 0 Thermophilic metalloprotease (M29) Response_reg PF00072.24 gi|73668523|ref|YP_304538.1| - 2e-23 82.7 0.0 2.2e-23 82.6 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain MCPsignal PF00015.21 gi|73668524|ref|YP_304539.1| - 5.2e-48 163.1 21.0 5.2e-48 163.1 21.0 5.3 3 1 3 6 6 6 3 Methyl-accepting chemotaxis protein (MCP) signalling domain HAMP PF00672.25 gi|73668524|ref|YP_304539.1| - 1.9e-11 44.2 0.1 1.1e-09 38.5 0.0 3.8 3 2 0 3 3 3 1 HAMP domain HBM PF16591.5 gi|73668524|ref|YP_304539.1| - 0.00047 19.7 0.7 0.00047 19.7 0.7 4.9 2 2 3 5 5 5 2 Helical bimodular sensor domain DUF1664 PF07889.12 gi|73668524|ref|YP_304539.1| - 0.0079 16.2 35.3 0.02 15.0 4.4 5.5 3 3 2 5 5 5 4 Protein of unknown function (DUF1664) DUF948 PF06103.11 gi|73668524|ref|YP_304539.1| - 0.042 14.1 0.8 0.042 14.1 0.8 7.6 4 4 4 8 8 8 0 Bacterial protein of unknown function (DUF948) T7SS_ESX_EspC PF10824.8 gi|73668524|ref|YP_304539.1| - 0.2 12.2 23.0 0.18 12.3 0.4 5.4 3 2 1 4 4 4 0 Excreted virulence factor EspC, type VII ESX diderm BAR_3 PF16746.5 gi|73668524|ref|YP_304539.1| - 2.1 8.0 34.0 0.084 12.6 4.2 4.4 2 1 1 4 4 4 0 BAR domain of APPL family BLOC1_2 PF10046.9 gi|73668524|ref|YP_304539.1| - 2.3 8.6 37.8 2.5 8.4 0.7 6.4 3 3 4 7 7 7 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FUSC PF04632.12 gi|73668524|ref|YP_304539.1| - 4.1 5.8 11.5 3.9 5.9 0.5 3.1 2 1 1 3 3 3 0 Fusaric acid resistance protein family AIP3 PF03915.13 gi|73668524|ref|YP_304539.1| - 7.1 5.6 41.5 1.1 8.3 6.3 3.4 2 1 1 3 3 3 0 Actin interacting protein 3 CheW PF01584.19 gi|73668525|ref|YP_304540.1| - 3.5e-36 123.9 1.7 4e-36 123.7 1.7 1.0 1 0 0 1 1 1 1 CheW-like domain Fe_dep_repr_C PF02742.15 gi|73668526|ref|YP_304541.1| - 2.1e-15 56.6 0.3 9.5e-15 54.4 0.0 1.9 1 1 1 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|73668526|ref|YP_304541.1| - 4e-13 49.4 0.0 5.9e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 gi|73668526|ref|YP_304541.1| - 1.3e-06 28.1 0.0 3.7e-06 26.7 0.0 1.6 2 0 0 2 2 2 1 MarR family MarR PF01047.22 gi|73668526|ref|YP_304541.1| - 0.00015 21.6 0.0 0.00033 20.5 0.0 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|73668526|ref|YP_304541.1| - 0.0091 15.9 0.1 0.03 14.2 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|73668526|ref|YP_304541.1| - 0.0094 15.7 0.0 0.021 14.6 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|73668526|ref|YP_304541.1| - 0.017 14.7 0.0 0.16 11.6 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|73668526|ref|YP_304541.1| - 0.029 14.8 0.0 0.044 14.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|73668526|ref|YP_304541.1| - 0.039 14.3 0.0 0.077 13.3 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_20 PF12840.7 gi|73668526|ref|YP_304541.1| - 0.042 13.9 0.0 0.3 11.2 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|73668526|ref|YP_304541.1| - 0.044 13.5 0.0 0.47 10.2 0.0 2.1 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_6 PF01418.17 gi|73668526|ref|YP_304541.1| - 0.045 13.7 0.0 0.2 11.7 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family HTH_Crp_2 PF13545.6 gi|73668526|ref|YP_304541.1| - 0.077 13.0 0.0 0.24 11.4 0.0 1.8 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Topoisom_bac PF01131.20 gi|73668526|ref|YP_304541.1| - 0.18 10.7 0.0 0.22 10.5 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase ZnuA PF01297.17 gi|73668527|ref|YP_304542.1| - 3.4e-65 220.0 0.8 3.9e-65 219.8 0.8 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic BshC PF10079.9 gi|73668527|ref|YP_304542.1| - 0.0095 14.7 0.0 0.014 14.2 0.0 1.2 1 0 0 1 1 1 1 Bacillithiol biosynthesis BshC Voldacs PF03517.13 gi|73668527|ref|YP_304542.1| - 0.013 15.7 1.2 0.027 14.6 0.2 2.0 1 1 1 2 2 2 0 Regulator of volume decrease after cellular swelling CoA_binding_2 PF13380.6 gi|73668527|ref|YP_304542.1| - 0.03 14.8 0.8 0.28 11.7 0.2 2.2 2 0 0 2 2 2 0 CoA binding domain ABC_tran PF00005.27 gi|73668528|ref|YP_304543.1| - 1.7e-28 99.8 0.0 2.4e-28 99.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668528|ref|YP_304543.1| - 7.1e-17 62.2 0.1 1.9e-09 37.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668528|ref|YP_304543.1| - 5.1e-08 32.6 0.0 1.5e-07 31.1 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|73668528|ref|YP_304543.1| - 2.5e-05 24.2 0.2 0.067 12.9 0.0 2.2 1 1 1 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|73668528|ref|YP_304543.1| - 0.00048 20.7 1.2 0.00078 20.0 0.4 1.7 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|73668528|ref|YP_304543.1| - 0.0023 18.2 0.1 0.0062 16.8 0.1 1.7 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 gi|73668528|ref|YP_304543.1| - 0.0043 17.3 0.0 0.13 12.5 0.0 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA PF00004.29 gi|73668528|ref|YP_304543.1| - 0.0052 17.2 0.7 0.059 13.8 0.7 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|73668528|ref|YP_304543.1| - 0.027 14.2 0.1 0.053 13.3 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 gi|73668528|ref|YP_304543.1| - 0.071 13.0 0.0 0.17 11.8 0.0 1.6 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_30 PF13604.6 gi|73668528|ref|YP_304543.1| - 0.09 12.5 0.0 0.42 10.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|73668528|ref|YP_304543.1| - 0.094 13.1 0.0 0.17 12.3 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 gi|73668528|ref|YP_304543.1| - 0.19 11.7 0.6 5.1 7.1 0.3 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ABC_ATPase PF09818.9 gi|73668528|ref|YP_304543.1| - 0.19 10.5 0.9 10 4.8 1.0 2.2 2 0 0 2 2 2 0 Predicted ATPase of the ABC class ABC-3 PF00950.17 gi|73668529|ref|YP_304544.1| - 4.9e-82 275.3 28.2 5.7e-82 275.1 28.2 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|73668529|ref|YP_304544.1| - 5e-08 32.3 24.8 1.3e-07 31.0 24.8 1.7 1 1 0 1 1 1 1 FecCD transport family Peripla_BP_2 PF01497.18 gi|73668531|ref|YP_304546.1| - 2.4e-23 83.0 0.0 3.2e-23 82.6 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein TPP_enzyme_C PF02775.21 gi|73668532|ref|YP_304547.1| - 1.3e-26 93.2 0.4 2.7e-26 92.2 0.1 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|73668533|ref|YP_304548.1| - 1.5e-67 227.7 0.3 2.3e-67 227.1 0.3 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|73668533|ref|YP_304548.1| - 7.2e-33 112.9 0.2 1.6e-32 111.9 0.2 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|73668533|ref|YP_304548.1| - 2e-08 34.2 0.1 4.4e-08 33.1 0.1 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain DUF1667 PF07892.11 gi|73668533|ref|YP_304548.1| - 0.05 13.6 0.8 0.46 10.6 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1667) Fer4 PF00037.27 gi|73668534|ref|YP_304549.1| - 1.4e-12 46.9 22.4 4.1e-08 32.7 4.8 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73668534|ref|YP_304549.1| - 1.3e-09 38.1 24.5 8.7e-09 35.4 10.2 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73668534|ref|YP_304549.1| - 1.5e-09 37.5 19.8 5.9e-06 26.1 3.3 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73668534|ref|YP_304549.1| - 4e-08 32.9 17.0 9.5e-05 22.3 1.4 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73668534|ref|YP_304549.1| - 1.3e-07 31.7 24.9 1.4e-06 28.3 11.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73668534|ref|YP_304549.1| - 3.8e-07 30.1 12.3 0.00048 20.2 0.5 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668534|ref|YP_304549.1| - 1.8e-06 28.4 12.4 1.8e-06 28.4 12.4 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668534|ref|YP_304549.1| - 4.9e-05 24.2 17.1 0.0022 18.9 2.1 2.8 2 1 1 3 3 3 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|73668534|ref|YP_304549.1| - 0.00032 21.0 19.9 0.004 17.6 2.1 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73668534|ref|YP_304549.1| - 0.0093 16.5 10.8 0.14 12.7 1.1 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|73668534|ref|YP_304549.1| - 0.0095 16.4 17.4 0.16 12.5 3.0 2.6 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73668534|ref|YP_304549.1| - 0.03 14.9 18.4 0.3 11.7 2.7 2.9 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73668534|ref|YP_304549.1| - 0.049 14.4 10.6 0.29 11.9 3.5 2.7 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|73668534|ref|YP_304549.1| - 1.1 10.1 17.3 0.21 12.4 1.3 2.4 2 1 1 3 3 2 0 4Fe-4S dicluster domain POR PF01558.18 gi|73668535|ref|YP_304550.1| - 1e-38 133.2 1.5 1.2e-38 133.0 1.5 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Dus PF01207.17 gi|73668536|ref|YP_304551.1| - 6.6e-82 275.1 0.0 7.6e-82 274.9 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|73668536|ref|YP_304551.1| - 0.00014 21.4 0.0 0.00024 20.6 0.0 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein SOR_SNZ PF01680.17 gi|73668536|ref|YP_304551.1| - 0.0025 17.6 0.7 0.03 14.1 0.1 2.3 1 1 1 2 2 2 1 SOR/SNZ family NMO PF03060.15 gi|73668536|ref|YP_304551.1| - 0.012 15.1 0.0 0.019 14.4 0.0 1.4 1 1 0 1 1 1 0 Nitronate monooxygenase Oxidored_FMN PF00724.20 gi|73668536|ref|YP_304551.1| - 0.012 14.9 0.0 0.015 14.5 0.0 1.2 1 0 0 1 1 1 0 NADH:flavin oxidoreductase / NADH oxidase family G3P_antiterm PF04309.12 gi|73668536|ref|YP_304551.1| - 0.12 11.8 0.0 0.22 10.9 0.0 1.4 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator Peptidase_S24 PF00717.23 gi|73668537|ref|YP_304552.1| - 4.5e-06 26.5 0.4 1.1e-05 25.3 0.1 1.8 2 0 0 2 2 2 1 Peptidase S24-like DNA_pol_E_B PF04042.16 gi|73668538|ref|YP_304553.1| - 2.2e-15 56.6 0.0 3.9e-15 55.8 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos PF00149.28 gi|73668538|ref|YP_304553.1| - 6.2e-10 39.9 0.0 1.2e-09 39.0 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|73668538|ref|YP_304553.1| - 7.8e-09 35.9 0.0 2e-08 34.6 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain tRNA_anti-codon PF01336.25 gi|73668538|ref|YP_304553.1| - 6e-05 23.0 0.0 0.00015 21.7 0.0 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Wyosine_form PF08608.12 gi|73668539|ref|YP_304554.1| - 3.6e-23 81.7 0.0 6.2e-23 80.9 0.0 1.4 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 gi|73668539|ref|YP_304554.1| - 4.2e-21 76.0 0.0 3.9e-20 72.9 0.0 2.2 1 1 0 1 1 1 1 Radical SAM superfamily Hydrolase PF00702.26 gi|73668539|ref|YP_304554.1| - 0.19 12.0 0.0 0.33 11.2 0.0 1.6 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase eRF1_2 PF03464.15 gi|73668540|ref|YP_304555.1| - 1.2e-41 142.2 0.0 2e-41 141.5 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|73668540|ref|YP_304555.1| - 6e-31 107.3 0.0 3.2e-30 104.9 0.0 2.1 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_1 PF03463.15 gi|73668540|ref|YP_304555.1| - 2.5e-14 53.4 0.1 7.6e-14 51.8 0.0 1.8 2 0 0 2 2 2 1 eRF1 domain 1 acVLRF1 PF18859.1 gi|73668540|ref|YP_304555.1| - 6.5e-12 45.9 0.0 1.6e-11 44.6 0.0 1.6 1 1 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|73668540|ref|YP_304555.1| - 3.6e-11 43.5 0.0 1.3e-10 41.7 0.0 1.9 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 Vps36-NZF-N PF16988.5 gi|73668540|ref|YP_304555.1| - 0.019 14.4 0.1 0.033 13.6 0.1 1.4 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain HypA PF01155.19 gi|73668540|ref|YP_304555.1| - 0.022 14.8 0.1 0.041 13.9 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|73668540|ref|YP_304555.1| - 0.061 12.8 3.0 0.28 10.7 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|73668540|ref|YP_304555.1| - 0.068 12.9 3.9 1 9.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|73668540|ref|YP_304555.1| - 0.13 12.4 2.1 0.89 9.7 0.3 2.5 2 0 0 2 2 2 0 Zinc ribbon domain baeRF_family2 PF18844.1 gi|73668540|ref|YP_304555.1| - 0.16 12.0 0.4 4.2 7.4 0.1 2.3 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 2 OrfB_Zn_ribbon PF07282.11 gi|73668540|ref|YP_304555.1| - 1.1 9.3 3.9 1 9.3 1.8 2.0 2 1 0 2 2 2 0 Putative transposase DNA-binding domain tRNA-synt_1d PF00750.19 gi|73668541|ref|YP_304556.1| - 5.6e-40 137.3 0.2 7.3e-40 137.0 0.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|73668541|ref|YP_304556.1| - 1.5e-34 118.7 0.3 4.6e-34 117.1 0.3 1.9 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|73668541|ref|YP_304556.1| - 9.9e-13 48.5 0.0 2.8e-12 47.1 0.0 1.8 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1f PF01921.18 gi|73668541|ref|YP_304556.1| - 1.1e-07 31.1 0.0 0.008 15.1 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|73668541|ref|YP_304556.1| - 7.4e-07 28.3 0.1 0.0011 17.8 0.0 3.0 2 1 1 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|73668541|ref|YP_304556.1| - 3.7e-05 23.2 0.1 7.5e-05 22.2 0.1 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 gi|73668541|ref|YP_304556.1| - 0.0046 15.3 0.0 0.0072 14.6 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) DUF2683 PF10884.8 gi|73668541|ref|YP_304556.1| - 0.06 13.6 0.1 1.4 9.2 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2683) DDE_3 PF13358.6 gi|73668543|ref|YP_304558.1| - 9.5e-20 70.8 0.4 1.2e-19 70.5 0.4 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF287 PF03384.14 gi|73668543|ref|YP_304558.1| - 0.34 11.3 3.0 1.4 9.4 3.0 2.1 1 1 0 1 1 1 0 Drosophila protein of unknown function, DUF287 HTH_32 PF13565.6 gi|73668545|ref|YP_304560.1| - 1e-13 51.7 1.1 4e-13 49.8 0.1 1.9 1 1 1 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.6 gi|73668545|ref|YP_304560.1| - 2e-12 46.5 0.1 8.5e-12 44.5 0.2 1.9 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 gi|73668545|ref|YP_304560.1| - 7.1e-09 35.6 0.2 1.4e-08 34.6 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 gi|73668545|ref|YP_304560.1| - 1.2e-08 34.9 0.1 2.7e-08 33.8 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain LZ_Tnp_IS481 PF13011.6 gi|73668545|ref|YP_304560.1| - 0.0015 19.0 0.1 0.0022 18.5 0.1 1.3 1 0 0 1 1 1 1 leucine-zipper of insertion element IS481 HTH_17 PF12728.7 gi|73668545|ref|YP_304560.1| - 0.0023 18.1 0.0 0.005 17.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|73668545|ref|YP_304560.1| - 0.0024 17.6 0.8 0.0058 16.4 0.8 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|73668545|ref|YP_304560.1| - 0.0055 16.6 0.1 0.012 15.5 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|73668545|ref|YP_304560.1| - 0.0062 16.4 0.1 0.017 15.0 0.1 1.8 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_7 PF02796.15 gi|73668545|ref|YP_304560.1| - 0.014 15.4 0.1 0.18 11.9 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_Tnp_1 PF01527.20 gi|73668545|ref|YP_304560.1| - 0.029 14.7 0.0 0.17 12.2 0.0 2.0 1 1 1 2 2 2 0 Transposase HTH_18 PF12833.7 gi|73668545|ref|YP_304560.1| - 0.034 14.4 0.1 0.063 13.5 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|73668545|ref|YP_304560.1| - 0.047 13.4 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_10 PF04967.12 gi|73668545|ref|YP_304560.1| - 0.1 12.4 0.0 0.28 11.0 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain UNC-79 PF14776.6 gi|73668546|ref|YP_304561.1| - 0.22 10.2 0.0 0.25 10.1 0.0 1.1 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 SWI2_SNF2 PF18766.1 gi|73668547|ref|YP_304562.1| - 9.5e-25 87.6 0.9 2.9e-24 86.0 0.9 1.8 1 1 0 1 1 1 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|73668547|ref|YP_304562.1| - 4e-12 46.5 0.0 1.7e-11 44.4 0.0 2.1 1 0 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|73668547|ref|YP_304562.1| - 4.9e-12 46.2 3.0 5.6e-12 46.0 0.7 2.3 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|73668547|ref|YP_304562.1| - 3.2e-09 36.8 0.2 7e-09 35.7 0.2 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_11 PF13086.6 gi|73668547|ref|YP_304562.1| - 0.025 14.4 0.7 0.11 12.3 0.5 1.9 1 1 1 2 2 2 0 AAA domain UvrD-helicase PF00580.21 gi|73668547|ref|YP_304562.1| - 0.044 13.3 9.5 0.12 11.9 7.7 2.7 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain FKBP_N PF01346.18 gi|73668547|ref|YP_304562.1| - 0.11 13.5 1.5 32 5.6 0.2 3.1 3 0 0 3 3 3 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DUF4720 PF15846.5 gi|73668547|ref|YP_304562.1| - 0.11 12.3 1.9 1.7 8.5 0.2 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4720) DUF1967 PF09269.11 gi|73668547|ref|YP_304562.1| - 0.13 12.3 1.0 23 5.0 0.1 3.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1967) Methylase_S PF01420.19 gi|73668548|ref|YP_304563.1| - 2.6e-25 89.6 7.1 1.1e-13 51.7 1.5 2.3 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain Osmo_CC PF08946.10 gi|73668548|ref|YP_304563.1| - 0.0092 16.2 3.2 0.69 10.2 0.1 2.7 2 0 0 2 2 2 2 Osmosensory transporter coiled coil GPS2_interact PF15784.5 gi|73668548|ref|YP_304563.1| - 0.15 12.5 2.5 10 6.6 0.1 2.4 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain FlgN PF05130.12 gi|73668548|ref|YP_304563.1| - 0.27 11.7 1.7 0.9 10.0 0.2 2.2 2 0 0 2 2 2 0 FlgN protein N6_Mtase PF02384.16 gi|73668549|ref|YP_304564.1| - 2.5e-66 224.1 0.3 4e-66 223.4 0.3 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|73668549|ref|YP_304564.1| - 7e-21 75.3 0.0 7e-21 75.3 0.0 3.1 4 0 0 4 4 4 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|73668549|ref|YP_304564.1| - 0.005 16.6 1.6 0.068 12.9 0.2 2.8 2 1 0 2 2 2 1 Putative RNA methylase family UPF0020 Eco57I PF07669.11 gi|73668549|ref|YP_304564.1| - 0.0078 16.7 0.2 0.075 13.5 0.0 2.6 2 1 0 2 2 2 1 Eco57I restriction-modification methylase MTS PF05175.14 gi|73668549|ref|YP_304564.1| - 0.088 12.3 0.0 0.25 10.9 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase small domain DUF4355 PF14265.6 gi|73668549|ref|YP_304564.1| - 0.11 12.8 13.0 0.032 14.5 7.8 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4355) HP0268 PF18618.1 gi|73668549|ref|YP_304564.1| - 0.54 10.7 4.3 0.29 11.6 0.5 2.7 3 0 0 3 3 3 0 HP0268 Y1_Tnp PF01797.16 gi|73668550|ref|YP_304565.1| - 2.8e-14 53.2 2.6 8.2e-12 45.3 0.2 2.0 1 1 1 2 2 2 2 Transposase IS200 like OrfB_IS605 PF01385.19 gi|73668551|ref|YP_304566.1| - 1.6e-27 96.1 1.8 3.1e-27 95.2 1.8 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73668551|ref|YP_304566.1| - 7.3e-21 73.9 0.2 1.4e-20 73.0 0.2 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73668551|ref|YP_304566.1| - 1.1e-20 72.8 0.5 1.9e-20 72.0 0.5 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73668551|ref|YP_304566.1| - 0.00014 22.0 2.3 0.00014 21.9 0.9 1.7 2 0 0 2 2 2 1 Piccolo Zn-finger HypA PF01155.19 gi|73668551|ref|YP_304566.1| - 0.13 12.3 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|73668551|ref|YP_304566.1| - 0.15 12.1 0.5 0.27 11.3 0.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon Flavodoxin_1 PF00258.25 gi|73668552|ref|YP_304567.1| - 0.0051 17.0 0.0 0.0078 16.4 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin KilA-N PF04383.13 gi|73668552|ref|YP_304567.1| - 0.032 14.1 0.2 0.54 10.1 0.0 2.5 2 1 1 3 3 3 0 KilA-N domain HTH_5 PF01022.20 gi|73668552|ref|YP_304567.1| - 0.073 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF4455 PF14643.6 gi|73668553|ref|YP_304568.1| - 0.0068 15.1 3.9 0.0073 15.0 3.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4455) VAPB_antitox PF02697.14 gi|73668553|ref|YP_304568.1| - 0.012 16.3 7.0 0.02 15.6 7.0 1.5 1 1 0 1 1 1 0 Putative antitoxin ZnuA PF01297.17 gi|73668553|ref|YP_304568.1| - 0.019 14.4 2.5 0.021 14.2 2.5 1.0 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Ribosomal_L30_N PF08079.12 gi|73668553|ref|YP_304568.1| - 0.022 15.0 5.4 0.031 14.5 5.4 1.2 1 0 0 1 1 1 0 Ribosomal L30 N-terminal domain EFhand_Ca_insen PF08726.10 gi|73668553|ref|YP_304568.1| - 0.023 14.8 0.4 0.07 13.2 0.1 1.8 2 0 0 2 2 2 0 Ca2+ insensitive EF hand DUF5446 PF17522.2 gi|73668553|ref|YP_304568.1| - 0.042 14.0 5.5 0.043 14.0 4.7 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5446) GrpE PF01025.19 gi|73668553|ref|YP_304568.1| - 0.045 13.4 6.6 0.051 13.2 6.6 1.1 1 0 0 1 1 1 0 GrpE CdiI_2 PF18593.1 gi|73668553|ref|YP_304568.1| - 0.058 14.0 0.7 0.068 13.8 0.7 1.2 1 0 0 1 1 1 0 CdiI immunity protein DUF4635 PF15466.6 gi|73668553|ref|YP_304568.1| - 0.14 11.6 5.0 0.13 11.8 4.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4635) Glyco_hydro_38N PF01074.22 gi|73668553|ref|YP_304568.1| - 0.16 11.3 1.5 0.17 11.2 1.5 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 N-terminal domain FdhE PF04216.12 gi|73668553|ref|YP_304568.1| - 0.18 11.7 0.7 0.17 11.7 0.7 1.0 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation MazG PF03819.17 gi|73668553|ref|YP_304568.1| - 1.3 9.3 10.5 0.5 10.6 5.4 2.1 2 0 0 2 2 2 0 MazG nucleotide pyrophosphohydrolase domain ParE_toxin PF05016.15 gi|73668554|ref|YP_304569.1| - 4.1e-11 43.4 0.6 4.7e-11 43.1 0.6 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE MoCF_biosynth PF00994.24 gi|73668555|ref|YP_304570.1| - 0.11 12.2 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Probable molybdopterin binding domain RHH_1 PF01402.21 gi|73668557|ref|YP_304572.1| - 0.00013 21.7 0.2 0.00056 19.7 0.0 1.9 1 1 1 2 2 2 1 Ribbon-helix-helix protein, copG family Latarcin PF10279.9 gi|73668557|ref|YP_304572.1| - 0.0051 17.2 0.2 0.006 17.0 0.2 1.1 1 0 0 1 1 1 1 Latarcin precursor BLOC1_2 PF10046.9 gi|73668557|ref|YP_304572.1| - 0.024 14.9 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4113 PF13438.6 gi|73668557|ref|YP_304572.1| - 0.2 11.8 1.6 8.3 6.6 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4113) TRAM PF01938.20 gi|73668558|ref|YP_304573.1| - 2.9e-17 62.4 0.4 3.2e-17 62.3 0.4 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|73668558|ref|YP_304573.1| - 0.11 12.2 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) TRAM PF01938.20 gi|73668559|ref|YP_304574.1| - 5.2e-17 61.6 1.7 5.8e-17 61.4 1.7 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|73668559|ref|YP_304574.1| - 0.012 15.3 0.1 0.022 14.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) S1 PF00575.23 gi|73668559|ref|YP_304574.1| - 0.55 10.6 5.1 8 6.9 0.4 2.3 1 1 1 2 2 2 0 S1 RNA binding domain TRAM PF01938.20 gi|73668560|ref|YP_304575.1| - 1.2e-16 60.4 1.3 1.4e-16 60.2 1.3 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|73668560|ref|YP_304575.1| - 0.049 13.4 0.1 0.09 12.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) S1 PF00575.23 gi|73668560|ref|YP_304575.1| - 0.42 11.0 4.7 8 6.9 0.4 2.3 1 1 1 2 2 2 0 S1 RNA binding domain TRAM PF01938.20 gi|73668561|ref|YP_304576.1| - 2.7e-17 62.5 0.9 3e-17 62.4 0.9 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|73668561|ref|YP_304576.1| - 0.0011 18.6 0.3 0.0018 17.9 0.3 1.4 1 0 0 1 1 1 1 Bacterial transferase hexapeptide (six repeats) Bactofilin PF04519.13 gi|73668562|ref|YP_304577.1| - 2.6e-07 30.9 0.7 5.6e-07 29.8 0.5 1.6 1 1 0 1 1 1 1 Polymer-forming cytoskeletal Hexapep PF00132.24 gi|73668562|ref|YP_304577.1| - 0.0091 15.7 0.1 1.7 8.5 0.0 3.3 3 0 0 3 3 3 1 Bacterial transferase hexapeptide (six repeats) ABC_tran PF00005.27 gi|73668563|ref|YP_304578.1| - 5.3e-32 111.2 0.0 8.2e-32 110.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668563|ref|YP_304578.1| - 1.8e-08 34.6 0.1 0.00052 19.9 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 gi|73668563|ref|YP_304578.1| - 2.4e-05 24.8 0.6 0.00021 21.7 0.6 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|73668563|ref|YP_304578.1| - 0.00037 20.9 0.2 0.003 17.9 0.2 2.2 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73668563|ref|YP_304578.1| - 0.00083 19.3 0.0 0.0017 18.3 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|73668563|ref|YP_304578.1| - 0.0011 19.3 0.2 0.0048 17.2 0.1 2.2 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|73668563|ref|YP_304578.1| - 0.0054 16.9 0.3 0.054 13.7 0.3 2.1 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|73668563|ref|YP_304578.1| - 0.0074 16.2 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_28 PF13521.6 gi|73668563|ref|YP_304578.1| - 0.0085 16.3 0.1 0.041 14.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|73668563|ref|YP_304578.1| - 0.0088 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_5 PF07728.14 gi|73668563|ref|YP_304578.1| - 0.01 15.8 0.5 0.044 13.8 0.1 2.2 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 gi|73668563|ref|YP_304578.1| - 0.011 15.6 0.0 0.13 12.1 0.0 2.2 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_29 PF13555.6 gi|73668563|ref|YP_304578.1| - 0.011 15.4 0.0 0.023 14.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|73668563|ref|YP_304578.1| - 0.014 15.9 0.1 0.021 15.3 0.1 1.4 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|73668563|ref|YP_304578.1| - 0.037 13.4 0.0 3 7.2 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 gi|73668563|ref|YP_304578.1| - 0.042 13.8 0.7 0.091 12.7 0.1 1.8 2 1 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 gi|73668563|ref|YP_304578.1| - 0.081 13.5 0.4 0.22 12.1 0.3 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|73668563|ref|YP_304578.1| - 0.082 12.5 0.1 0.35 10.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|73668563|ref|YP_304578.1| - 0.1 12.3 0.0 0.52 10.0 0.0 2.0 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|73668563|ref|YP_304578.1| - 0.11 12.8 0.0 0.25 11.7 0.0 1.8 1 1 0 1 1 1 0 RNA helicase NTPase_1 PF03266.15 gi|73668563|ref|YP_304578.1| - 0.14 12.0 0.7 15 5.5 0.2 2.4 2 0 0 2 2 2 0 NTPase TsaE PF02367.17 gi|73668563|ref|YP_304578.1| - 0.15 12.1 0.1 0.26 11.3 0.1 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE BPD_transp_1 PF00528.22 gi|73668564|ref|YP_304579.1| - 4.7e-25 88.4 10.2 4.7e-25 88.4 10.2 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component NMT1_2 PF13379.6 gi|73668565|ref|YP_304580.1| - 4.5e-39 134.7 0.1 6.6e-39 134.1 0.1 1.2 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 gi|73668565|ref|YP_304580.1| - 3e-20 73.1 0.0 4e-20 72.7 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|73668565|ref|YP_304580.1| - 2.8e-07 30.4 0.0 3.6e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 gi|73668565|ref|YP_304580.1| - 6.4e-05 22.5 0.0 0.00044 19.8 0.0 2.2 2 1 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 NMT1_3 PF16868.5 gi|73668565|ref|YP_304580.1| - 9.1e-05 22.0 0.0 0.00032 20.2 0.0 1.9 1 1 1 2 2 2 1 NMT1-like family DctP PF03480.13 gi|73668565|ref|YP_304580.1| - 0.022 14.1 0.0 0.036 13.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein, family 7 LysR_substrate PF03466.20 gi|73668565|ref|YP_304580.1| - 0.04 13.3 0.0 0.074 12.4 0.0 1.4 1 0 0 1 1 1 0 LysR substrate binding domain Ppnp PF06865.11 gi|73668565|ref|YP_304580.1| - 0.067 13.6 0.0 0.17 12.4 0.0 1.6 1 0 0 1 1 1 0 Pyrimidine/purine nucleoside phosphorylase HTH_3 PF01381.22 gi|73668566|ref|YP_304581.1| - 2.2e-08 34.0 0.0 5.3e-08 32.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|73668566|ref|YP_304581.1| - 0.00084 19.3 0.1 0.0032 17.5 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain PrpR_N PF06506.11 gi|73668566|ref|YP_304581.1| - 0.015 14.9 1.2 0.026 14.1 1.2 1.4 1 0 0 1 1 1 0 Propionate catabolism activator CENP-B_N PF04218.13 gi|73668566|ref|YP_304581.1| - 0.066 12.9 2.5 0.61 9.8 0.0 3.1 4 0 0 4 4 4 0 CENP-B N-terminal DNA-binding domain HTH_31 PF13560.6 gi|73668566|ref|YP_304581.1| - 0.075 13.4 0.0 0.14 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_26 PF13443.6 gi|73668566|ref|YP_304581.1| - 0.11 13.0 0.0 0.24 11.8 0.0 1.6 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain S-layer PF07752.11 gi|73668567|ref|YP_304582.1| - 3.8e-188 622.6 28.2 4.8e-95 317.5 9.1 2.5 2 0 0 2 2 2 2 S-layer protein DUF4198 PF10670.9 gi|73668567|ref|YP_304582.1| - 5.8e-07 30.1 13.5 0.043 14.2 0.1 5.6 4 1 1 5 5 5 2 Domain of unknown function (DUF4198) PEGA PF08308.11 gi|73668567|ref|YP_304582.1| - 6.2e-07 29.2 13.1 0.0097 15.8 1.0 5.1 5 0 0 5 5 5 2 PEGA domain CarbopepD_reg_2 PF13715.6 gi|73668567|ref|YP_304582.1| - 1e-05 25.4 13.0 0.023 14.7 2.1 4.9 4 0 0 4 4 4 2 CarboxypepD_reg-like domain CarboxypepD_reg PF13620.6 gi|73668567|ref|YP_304582.1| - 1.6e-05 25.1 13.6 0.0035 17.6 1.1 5.4 5 1 0 5 5 5 2 Carboxypeptidase regulatory-like domain PKD_3 PF16820.5 gi|73668567|ref|YP_304582.1| - 0.00071 19.3 16.3 6.2 6.7 0.1 6.7 4 1 2 6 6 6 3 PKD-like domain tRNA-synt_1c_C PF03950.18 gi|73668567|ref|YP_304582.1| - 0.0008 19.3 2.3 3.8 7.3 0.1 3.9 3 0 0 3 3 3 2 tRNA synthetases class I (E and Q), anti-codon binding domain Ig_3 PF13927.6 gi|73668567|ref|YP_304582.1| - 0.0013 19.2 15.1 1.2 9.8 0.5 5.6 6 0 0 6 6 4 2 Immunoglobulin domain PKD PF00801.20 gi|73668567|ref|YP_304582.1| - 0.0014 18.4 19.2 0.038 13.8 1.2 4.9 4 0 0 4 4 4 2 PKD domain SH3_16 PF18348.1 gi|73668567|ref|YP_304582.1| - 0.024 14.4 1.4 5 7.0 0.0 2.8 3 0 0 3 3 3 0 Bacterial dipeptidyl-peptidase Sh3 domain YtkA PF13115.6 gi|73668567|ref|YP_304582.1| - 0.026 15.1 13.6 0.27 11.9 0.1 5.8 6 1 0 6 6 5 0 YtkA-like PrcB_C PF14343.6 gi|73668567|ref|YP_304582.1| - 0.033 14.3 0.2 9.6 6.4 0.0 2.8 2 0 0 2 2 2 0 PrcB C-terminal AIRS PF00586.24 gi|73668568|ref|YP_304583.1| - 7.8e-21 74.5 1.8 1.5e-20 73.6 1.8 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|73668568|ref|YP_304583.1| - 1.5e-06 28.4 0.0 2.7e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Radical_SAM PF04055.21 gi|73668569|ref|YP_304584.1| - 1.7e-15 57.8 0.1 4.4e-15 56.5 0.0 1.7 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73668569|ref|YP_304584.1| - 6.8e-09 36.1 0.0 1.2e-08 35.4 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73668569|ref|YP_304584.1| - 4.2e-08 33.3 0.0 8.2e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain UBX PF00789.20 gi|73668569|ref|YP_304584.1| - 0.014 15.5 0.0 0.038 14.2 0.0 1.7 2 0 0 2 2 2 0 UBX domain NRDD PF13597.6 gi|73668570|ref|YP_304585.1| - 1.4e-158 529.1 0.2 1.8e-158 528.8 0.2 1.1 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Glutaredoxin PF00462.24 gi|73668571|ref|YP_304586.1| - 2.4e-08 34.1 0.0 3.2e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 gi|73668571|ref|YP_304586.1| - 0.0001 22.6 0.0 0.00012 22.4 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) GST_N_3 PF13417.6 gi|73668571|ref|YP_304586.1| - 0.0017 18.7 0.0 0.0023 18.3 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Thioredoxin_3 PF13192.6 gi|73668571|ref|YP_304586.1| - 0.0083 16.2 0.3 0.019 15.0 0.3 1.7 1 1 0 1 1 1 1 Thioredoxin domain VP_N-CPKC PF11475.8 gi|73668571|ref|YP_304586.1| - 0.11 12.5 1.7 1.1 9.2 0.2 2.4 2 0 0 2 2 2 0 Virion protein N terminal domain Thioredoxin_2 PF13098.6 gi|73668571|ref|YP_304586.1| - 0.14 12.6 0.2 0.21 12.0 0.2 1.6 1 1 0 1 1 1 0 Thioredoxin-like domain Rad51 PF08423.11 gi|73668572|ref|YP_304587.1| - 1.9e-33 115.8 0.1 2.4e-33 115.5 0.1 1.1 1 0 0 1 1 1 1 Rad51 ATPase PF06745.13 gi|73668572|ref|YP_304587.1| - 9.6e-15 54.5 0.6 1.5e-13 50.6 0.6 2.0 1 1 0 1 1 1 1 KaiC RecA PF00154.21 gi|73668572|ref|YP_304587.1| - 2.3e-12 46.9 0.0 2.9e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|73668572|ref|YP_304587.1| - 8.6e-10 38.5 0.0 1.4e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain Zot PF05707.12 gi|73668572|ref|YP_304587.1| - 1.5e-08 34.6 0.0 1.9e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) TrwB_AAD_bind PF10412.9 gi|73668572|ref|YP_304587.1| - 1.1e-06 27.9 0.1 3.1e-05 23.1 0.0 2.1 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_24 PF13479.6 gi|73668572|ref|YP_304587.1| - 1.5e-05 24.9 0.0 2e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|73668572|ref|YP_304587.1| - 8.6e-05 22.3 0.0 0.00013 21.7 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain IstB_IS21 PF01695.17 gi|73668572|ref|YP_304587.1| - 0.00025 20.9 0.0 0.00048 19.9 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein CbiA PF01656.23 gi|73668572|ref|YP_304587.1| - 0.00041 20.4 0.0 0.0006 19.9 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain PhoH PF02562.16 gi|73668572|ref|YP_304587.1| - 0.0013 18.2 0.2 0.0022 17.5 0.2 1.3 1 0 0 1 1 1 1 PhoH-like protein DnaB_C PF03796.15 gi|73668572|ref|YP_304587.1| - 0.004 16.5 0.1 0.033 13.5 0.0 2.0 2 1 1 3 3 3 1 DnaB-like helicase C terminal domain AAA_18 PF13238.6 gi|73668572|ref|YP_304587.1| - 0.0048 17.5 0.0 0.0074 16.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_31 PF13614.6 gi|73668572|ref|YP_304587.1| - 0.0057 16.6 0.0 0.0074 16.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|73668572|ref|YP_304587.1| - 0.0059 15.8 0.0 0.0089 15.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) DUF2075 PF09848.9 gi|73668572|ref|YP_304587.1| - 0.01 15.1 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) IPT PF01745.16 gi|73668572|ref|YP_304587.1| - 0.021 14.2 0.1 0.1 12.0 0.0 2.1 2 0 0 2 2 2 0 Isopentenyl transferase UvrD-helicase PF00580.21 gi|73668572|ref|YP_304587.1| - 0.021 14.3 0.1 0.032 13.8 0.1 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain DUF87 PF01935.17 gi|73668572|ref|YP_304587.1| - 0.021 14.9 0.0 0.11 12.5 0.0 1.9 1 1 0 1 1 1 0 Helicase HerA, central domain AAA_30 PF13604.6 gi|73668572|ref|YP_304587.1| - 0.038 13.7 0.0 0.073 12.8 0.0 1.5 2 0 0 2 2 2 0 AAA domain CLP1_P PF16575.5 gi|73668572|ref|YP_304587.1| - 0.054 13.3 0.0 0.091 12.6 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop ResIII PF04851.15 gi|73668572|ref|YP_304587.1| - 0.082 12.9 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit MipZ PF09140.11 gi|73668572|ref|YP_304587.1| - 0.088 12.1 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 ATPase MipZ AAA_28 PF13521.6 gi|73668572|ref|YP_304587.1| - 0.092 13.0 0.1 0.22 11.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|73668572|ref|YP_304587.1| - 0.1 12.9 0.0 0.17 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain CobA_CobO_BtuR PF02572.15 gi|73668572|ref|YP_304587.1| - 0.17 12.1 0.6 8.9 6.5 0.2 2.2 2 0 0 2 2 2 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Inos-1-P_synth PF01658.17 gi|73668573|ref|YP_304588.1| - 8.6e-32 109.6 0.1 1.9e-31 108.5 0.0 1.6 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase DUF1611_N PF17396.2 gi|73668573|ref|YP_304588.1| - 0.018 15.3 0.0 0.042 14.1 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF1611_N) Rossmann-like domain NAD_binding_5 PF07994.12 gi|73668573|ref|YP_304588.1| - 0.055 12.8 0.1 0.13 11.6 0.1 1.6 1 1 0 1 1 1 0 Myo-inositol-1-phosphate synthase IF-2B PF01008.17 gi|73668574|ref|YP_304589.1| - 4.8e-85 285.2 0.0 5.7e-85 284.9 0.0 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family Gly_kinase PF02595.15 gi|73668574|ref|YP_304589.1| - 0.069 12.1 0.1 0.12 11.3 0.1 1.4 1 0 0 1 1 1 0 Glycerate kinase family Peroxin-22 PF12827.7 gi|73668574|ref|YP_304589.1| - 0.077 12.9 0.0 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 Peroxisomal biogenesis protein family Sec61_beta PF03911.16 gi|73668575|ref|YP_304590.1| - 6.7e-14 51.6 0.2 7.9e-14 51.4 0.2 1.1 1 0 0 1 1 1 1 Sec61beta family AXE1 PF05448.12 gi|73668576|ref|YP_304591.1| - 1.2e-07 30.7 0.0 6.2e-07 28.4 0.0 1.8 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Hydrolase_4 PF12146.8 gi|73668576|ref|YP_304591.1| - 6.2e-07 28.9 0.0 1.4e-05 24.5 0.0 2.1 1 1 0 2 2 2 1 Serine aminopeptidase, S33 DLH PF01738.18 gi|73668576|ref|YP_304591.1| - 3.7e-05 23.4 0.0 6.4e-05 22.6 0.0 1.5 1 1 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 gi|73668576|ref|YP_304591.1| - 0.00011 21.7 0.0 0.00034 20.1 0.0 1.8 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 gi|73668576|ref|YP_304591.1| - 0.0012 18.5 0.0 0.0027 17.4 0.0 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|73668576|ref|YP_304591.1| - 0.0094 15.9 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_3 PF07859.13 gi|73668576|ref|YP_304591.1| - 0.049 13.5 0.0 0.12 12.3 0.0 1.4 1 1 0 1 1 1 0 alpha/beta hydrolase fold MutS_V PF00488.21 gi|73668577|ref|YP_304592.1| - 2.8e-08 34.0 0.0 4.9e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 MutS domain V HHH_5 PF14520.6 gi|73668577|ref|YP_304592.1| - 7.4e-05 23.3 0.0 0.00022 21.8 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|73668577|ref|YP_304592.1| - 0.0068 16.5 0.1 0.024 14.7 0.1 1.9 1 1 0 1 1 1 1 Helix-hairpin-helix motif IMS_HHH PF11798.8 gi|73668577|ref|YP_304592.1| - 0.098 13.0 0.0 1 9.8 0.0 2.6 2 0 0 2 2 2 0 IMS family HHH motif PAS_3 PF08447.12 gi|73668578|ref|YP_304593.1| - 3.7e-41 139.3 1.2 9.5e-19 67.5 0.1 3.3 3 0 0 3 3 3 2 PAS fold DUF2111 PF09884.9 gi|73668578|ref|YP_304593.1| - 7.3e-33 112.5 0.1 3.5e-32 110.3 0.1 2.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) GAF_2 PF13185.6 gi|73668578|ref|YP_304593.1| - 5.4e-12 46.2 0.0 6.8e-10 39.4 0.0 2.5 2 0 0 2 2 2 1 GAF domain PAS PF00989.25 gi|73668578|ref|YP_304593.1| - 5.6e-11 42.4 0.8 7.5e-05 22.7 0.1 3.1 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.10 gi|73668578|ref|YP_304593.1| - 1.8e-09 37.9 0.0 0.011 16.0 0.0 3.6 4 0 0 4 4 4 2 PAS fold PAS_9 PF13426.7 gi|73668578|ref|YP_304593.1| - 3.8e-08 33.5 2.1 0.016 15.4 0.1 3.4 3 0 0 3 3 3 3 PAS domain PAS_11 PF14598.6 gi|73668578|ref|YP_304593.1| - 1.1e-05 25.5 0.0 0.14 12.3 0.0 2.5 2 0 0 2 2 2 2 PAS domain VanY PF02557.17 gi|73668578|ref|YP_304593.1| - 0.00011 22.1 0.0 0.026 14.3 0.0 2.3 2 0 0 2 2 2 1 D-alanyl-D-alanine carboxypeptidase GAF PF01590.26 gi|73668578|ref|YP_304593.1| - 0.00016 22.3 0.0 0.0022 18.6 0.0 2.3 2 0 0 2 2 2 1 GAF domain GAF_3 PF13492.6 gi|73668578|ref|YP_304593.1| - 0.00026 21.3 0.0 0.0098 16.2 0.0 2.5 3 0 0 3 3 3 1 GAF domain SnoaL_3 PF13474.6 gi|73668578|ref|YP_304593.1| - 0.049 13.9 0.1 0.47 10.7 0.0 2.2 2 0 0 2 2 2 0 SnoaL-like domain DUF3654 PF12376.8 gi|73668578|ref|YP_304593.1| - 0.075 13.2 0.8 1.7 8.8 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3654) Melibiase_2_C PF17450.2 gi|73668578|ref|YP_304593.1| - 0.14 12.4 0.0 22 5.4 0.0 2.6 2 0 0 2 2 2 0 Alpha galactosidase A C-terminal beta sandwich domain ABC2_membrane_3 PF12698.7 gi|73668579|ref|YP_304594.1| - 2.8e-44 151.6 23.0 3.3e-44 151.4 23.0 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|73668579|ref|YP_304594.1| - 6.6e-13 48.6 16.0 1.1e-12 47.9 16.0 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|73668579|ref|YP_304594.1| - 2e-07 30.6 20.7 2e-07 30.6 20.7 2.3 2 1 0 2 2 2 1 ABC-2 type transporter ABC_tran PF00005.27 gi|73668580|ref|YP_304595.1| - 1.5e-28 100.0 0.1 2.5e-27 96.1 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|73668580|ref|YP_304595.1| - 2.7e-15 57.0 2.2 2e-08 34.4 0.2 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|73668580|ref|YP_304595.1| - 1e-14 55.0 1.6 1e-14 55.0 1.6 1.7 2 0 0 2 2 1 1 Domain of unknown function (DUF4162) AAA_16 PF13191.6 gi|73668580|ref|YP_304595.1| - 0.00014 22.3 0.0 0.0042 17.5 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|73668580|ref|YP_304595.1| - 0.0005 20.4 0.2 0.0025 18.1 0.1 2.2 1 1 1 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|73668580|ref|YP_304595.1| - 0.00098 19.7 0.2 0.00098 19.7 0.2 3.4 4 0 0 4 4 4 1 AAA domain RsgA_GTPase PF03193.16 gi|73668580|ref|YP_304595.1| - 0.0011 18.9 0.3 0.0062 16.4 0.0 2.3 3 0 0 3 3 3 1 RsgA GTPase AAA_14 PF13173.6 gi|73668580|ref|YP_304595.1| - 0.0019 18.3 3.3 1 9.4 0.0 3.3 2 1 0 3 3 3 2 AAA domain SMC_N PF02463.19 gi|73668580|ref|YP_304595.1| - 0.0043 16.5 0.2 2.7 7.4 0.0 2.7 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73668580|ref|YP_304595.1| - 0.0073 16.0 0.3 0.056 13.2 0.0 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|73668580|ref|YP_304595.1| - 0.017 15.7 0.1 0.064 13.8 0.1 2.2 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|73668580|ref|YP_304595.1| - 0.019 15.2 0.0 0.039 14.2 0.0 1.5 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 gi|73668580|ref|YP_304595.1| - 0.023 14.4 0.0 0.062 13.0 0.0 1.8 1 1 1 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|73668580|ref|YP_304595.1| - 0.024 14.6 0.2 0.71 9.7 0.0 2.2 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Arf PF00025.21 gi|73668580|ref|YP_304595.1| - 0.033 13.7 1.6 1.1 8.7 0.1 2.7 3 0 0 3 3 3 0 ADP-ribosylation factor family AAA_33 PF13671.6 gi|73668580|ref|YP_304595.1| - 0.039 14.1 0.0 2 8.6 0.0 2.3 2 1 0 2 2 2 0 AAA domain cobW PF02492.19 gi|73668580|ref|YP_304595.1| - 0.048 13.2 0.1 0.37 10.4 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 gi|73668580|ref|YP_304595.1| - 0.057 13.6 0.1 11 6.2 0.0 2.9 3 0 0 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase TsaE PF02367.17 gi|73668580|ref|YP_304595.1| - 0.064 13.3 0.0 0.29 11.2 0.0 2.1 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RibD_C PF01872.17 gi|73668581|ref|YP_304596.1| - 1.6e-13 50.9 0.0 3e-13 50.0 0.0 1.4 1 1 0 1 1 1 1 RibD C-terminal domain DUF1724 PF08350.10 gi|73668583|ref|YP_304598.1| - 1.3e-21 76.5 0.5 2.3e-21 75.7 0.5 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|73668583|ref|YP_304598.1| - 0.0031 17.3 0.1 0.0066 16.3 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|73668583|ref|YP_304598.1| - 0.0034 17.3 0.1 0.0084 16.0 0.1 1.6 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|73668583|ref|YP_304598.1| - 0.0067 16.3 0.0 0.017 15.0 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Phage_rep_org_N PF09681.10 gi|73668583|ref|YP_304598.1| - 0.008 16.1 0.7 0.017 15.0 0.1 1.8 2 0 0 2 2 2 1 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_27 PF13463.6 gi|73668583|ref|YP_304598.1| - 0.015 15.8 0.0 0.052 14.1 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|73668583|ref|YP_304598.1| - 0.016 15.3 0.0 0.035 14.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain TFIIE_alpha PF02002.17 gi|73668583|ref|YP_304598.1| - 0.032 14.1 0.1 0.079 12.8 0.1 1.6 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_45 PF14947.6 gi|73668583|ref|YP_304598.1| - 0.054 13.5 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix Response_reg PF00072.24 gi|73668584|ref|YP_304599.1| - 7.2e-29 100.2 0.9 8.1e-29 100.1 0.9 1.0 1 0 0 1 1 1 1 Response regulator receiver domain FtsJ PF01728.19 gi|73668584|ref|YP_304599.1| - 0.092 12.9 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase FleQ PF06490.11 gi|73668584|ref|YP_304599.1| - 0.1 13.0 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ Response_reg PF00072.24 gi|73668585|ref|YP_304600.1| - 2.4e-36 124.3 0.1 5.2e-18 65.3 0.0 2.5 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.26 gi|73668585|ref|YP_304600.1| - 1.8e-32 112.2 0.0 3.6e-32 111.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|73668585|ref|YP_304600.1| - 6.4e-20 71.0 0.1 3.1e-19 68.8 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain CHASE4 PF05228.13 gi|73668585|ref|YP_304600.1| - 6.3e-18 65.3 0.0 3.3e-15 56.5 0.0 2.4 2 0 0 2 2 2 1 CHASE4 domain PAS_4 PF08448.10 gi|73668585|ref|YP_304600.1| - 2.2e-12 47.2 0.0 4.4e-12 46.2 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|73668585|ref|YP_304600.1| - 4.8e-10 39.6 0.1 2.4e-09 37.4 0.0 2.4 2 0 0 2 2 2 1 PAS domain PAS_10 PF13596.6 gi|73668585|ref|YP_304600.1| - 2.7e-08 34.3 0.0 1.2e-07 32.3 0.0 2.1 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 gi|73668585|ref|YP_304600.1| - 3.1e-07 30.4 0.0 9.6e-07 28.8 0.0 2.0 1 0 0 1 1 1 1 PAS fold dCache_3 PF14827.6 gi|73668585|ref|YP_304600.1| - 1.5e-06 28.0 0.1 0.021 14.5 0.1 2.5 2 0 0 2 2 2 2 Double sensory domain of two-component sensor kinase Cache_3-Cache_2 PF17201.4 gi|73668585|ref|YP_304600.1| - 0.00042 19.7 0.0 0.012 14.9 0.0 2.3 2 0 0 2 2 2 1 Cache 3/Cache 2 fusion domain sCache_3_2 PF17203.4 gi|73668585|ref|YP_304600.1| - 0.0012 19.0 0.0 0.4 10.8 0.0 2.6 2 0 0 2 2 2 1 Single cache domain 3 sCache_3_3 PF17202.4 gi|73668585|ref|YP_304600.1| - 0.0016 18.9 0.0 0.013 15.9 0.0 2.5 2 0 0 2 2 2 1 Single cache domain 3 HATPase_c_5 PF14501.6 gi|73668585|ref|YP_304600.1| - 0.0028 17.5 0.0 0.0074 16.2 0.0 1.7 1 0 0 1 1 1 1 GHKL domain VPS28 PF03997.12 gi|73668585|ref|YP_304600.1| - 0.0063 16.2 0.0 0.014 15.0 0.0 1.6 1 0 0 1 1 1 1 VPS28 protein HATPase_c_3 PF13589.6 gi|73668585|ref|YP_304600.1| - 0.011 15.5 0.0 0.031 14.1 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|73668585|ref|YP_304600.1| - 0.013 15.9 0.1 0.028 14.8 0.1 1.6 1 0 0 1 1 1 0 HAMP domain Thioredoxin_6 PF13848.6 gi|73668585|ref|YP_304600.1| - 0.02 14.8 0.1 0.23 11.4 0.0 2.6 2 0 0 2 2 2 0 Thioredoxin-like domain SPRY PF00622.28 gi|73668585|ref|YP_304600.1| - 0.14 12.3 0.0 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 SPRY domain E1-E2_ATPase PF00122.20 gi|73668586|ref|YP_304601.1| - 6.7e-49 165.9 0.7 6.7e-49 165.9 0.7 3.5 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|73668586|ref|YP_304601.1| - 2.4e-43 147.9 1.8 2.4e-43 147.9 1.8 2.4 2 1 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|73668586|ref|YP_304601.1| - 1.1e-22 81.4 0.8 2.2e-21 77.1 0.8 2.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|73668586|ref|YP_304601.1| - 5.1e-21 74.6 0.0 2.9e-20 72.1 0.0 2.1 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|73668586|ref|YP_304601.1| - 8.7e-17 60.6 0.1 2.1e-16 59.3 0.1 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|73668586|ref|YP_304601.1| - 6.1e-10 39.3 1.9 1.2e-05 25.2 1.6 2.6 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|73668586|ref|YP_304601.1| - 1.1e-05 26.0 0.0 3.9e-05 24.1 0.0 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase DUF316 PF03761.15 gi|73668586|ref|YP_304601.1| - 0.15 11.6 0.6 1.1 8.8 0.1 2.2 2 0 0 2 2 2 0 Chymotrypsin family Peptidase-S1 URO-D PF01208.17 gi|73668587|ref|YP_304602.1| - 6.7e-85 285.3 0.1 7.5e-85 285.1 0.1 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) RACo_C_ter PF14574.6 gi|73668588|ref|YP_304603.1| - 1.3e-68 230.8 8.3 1.6e-68 230.6 6.5 1.9 2 0 0 2 2 2 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|73668588|ref|YP_304603.1| - 5.3e-09 36.0 0.0 2e-08 34.1 0.0 2.0 2 0 0 2 2 2 1 RACo middle region Fer4_16 PF13484.6 gi|73668588|ref|YP_304603.1| - 6.6e-06 27.0 8.8 0.00017 22.4 1.6 2.8 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|73668588|ref|YP_304603.1| - 1.4e-05 25.5 11.0 3.4e-05 24.4 11.0 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73668588|ref|YP_304603.1| - 2e-05 24.7 9.7 4.2e-05 23.6 9.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73668588|ref|YP_304603.1| - 0.00017 21.6 10.0 0.00042 20.4 10.0 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73668588|ref|YP_304603.1| - 0.00024 20.8 4.2 0.00024 20.8 4.2 2.7 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73668588|ref|YP_304603.1| - 0.00024 21.1 11.6 0.002 18.2 2.4 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668588|ref|YP_304603.1| - 0.0016 18.4 12.7 0.077 13.1 3.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73668588|ref|YP_304603.1| - 0.002 18.6 2.9 0.038 14.4 0.1 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|73668588|ref|YP_304603.1| - 0.0021 18.1 3.0 0.0048 17.0 3.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73668588|ref|YP_304603.1| - 0.0035 17.4 13.8 0.18 12.0 2.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73668588|ref|YP_304603.1| - 0.0036 17.8 5.3 0.05 14.2 0.2 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain KH_7 PF17214.3 gi|73668588|ref|YP_304603.1| - 0.0059 16.5 0.0 0.015 15.2 0.0 1.6 1 0 0 1 1 1 1 KH domain Fer4_3 PF12798.7 gi|73668588|ref|YP_304603.1| - 0.065 14.2 18.4 0.14 13.2 7.1 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73668588|ref|YP_304603.1| - 1.1 9.9 11.6 0.69 10.6 2.2 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73668588|ref|YP_304603.1| - 7.8 6.7 10.0 42 4.4 10.1 2.1 2 1 0 2 2 2 0 4Fe-4S dicluster domain cobW PF02492.19 gi|73668589|ref|YP_304604.1| - 2.1e-35 121.9 0.5 2.1e-35 121.9 0.5 1.6 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|73668589|ref|YP_304604.1| - 0.00031 19.8 0.5 0.00066 18.7 0.5 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|73668589|ref|YP_304604.1| - 0.00051 19.7 2.1 0.00082 19.0 0.8 1.9 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_31 PF13614.6 gi|73668589|ref|YP_304604.1| - 0.00051 20.0 1.3 0.0015 18.5 1.3 1.9 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|73668589|ref|YP_304604.1| - 0.00066 19.7 0.8 0.00066 19.7 0.8 2.2 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain LpxK PF02606.14 gi|73668589|ref|YP_304604.1| - 0.016 14.3 0.7 0.016 14.3 0.7 1.8 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_11 PF13086.6 gi|73668589|ref|YP_304604.1| - 0.018 14.8 10.2 11 5.7 10.2 2.3 1 1 0 1 1 1 0 AAA domain DUF2922 PF11148.8 gi|73668589|ref|YP_304604.1| - 0.027 14.2 4.2 4.5 7.1 0.3 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF2922) DUF5011 PF16403.5 gi|73668589|ref|YP_304604.1| - 0.3 11.3 0.0 0.3 11.3 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF5011) Zip PF02535.22 gi|73668589|ref|YP_304604.1| - 5 6.2 20.5 9.4 5.3 20.5 1.4 1 0 0 1 1 1 0 ZIP Zinc transporter CbiM PF01891.16 gi|73668590|ref|YP_304605.1| - 3.1e-54 184.0 18.4 3.1e-54 184.0 18.4 1.6 2 0 0 2 2 2 1 Cobalt uptake substrate-specific transmembrane region PDGLE PF13190.6 gi|73668590|ref|YP_304605.1| - 3.9e-06 26.7 0.0 3.9e-06 26.7 0.0 2.4 3 0 0 3 3 3 1 PDGLE domain SHR3_chaperone PF08229.11 gi|73668590|ref|YP_304605.1| - 0.062 12.3 0.4 0.19 10.7 0.0 1.9 2 0 0 2 2 2 0 ER membrane protein SH3 CbiQ PF02361.16 gi|73668591|ref|YP_304606.1| - 5.7e-35 120.9 12.4 7.7e-35 120.5 12.4 1.1 1 0 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.27 gi|73668592|ref|YP_304607.1| - 1.6e-31 109.7 0.0 2.9e-31 108.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668592|ref|YP_304607.1| - 1.1e-18 68.1 1.6 8.7e-12 45.5 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668592|ref|YP_304607.1| - 3.2e-11 43.1 0.0 5.2e-11 42.4 0.0 1.4 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|73668592|ref|YP_304607.1| - 1.7e-09 37.9 0.4 0.00078 19.3 0.3 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|73668592|ref|YP_304607.1| - 6.5e-05 22.6 0.1 0.00013 21.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|73668592|ref|YP_304607.1| - 0.0011 19.5 0.1 0.0016 19.0 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_13 PF13166.6 gi|73668592|ref|YP_304607.1| - 0.0069 15.1 0.0 2.1 6.9 0.0 2.1 2 0 0 2 2 2 2 AAA domain SbcCD_C PF13558.6 gi|73668592|ref|YP_304607.1| - 0.035 14.3 0.0 2.1 8.7 0.0 2.9 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 gi|73668592|ref|YP_304607.1| - 0.056 13.3 0.1 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase AAA_28 PF13521.6 gi|73668592|ref|YP_304607.1| - 0.061 13.6 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain DLIC PF05783.11 gi|73668592|ref|YP_304607.1| - 0.074 11.9 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) NACHT PF05729.12 gi|73668592|ref|YP_304607.1| - 0.16 11.9 0.5 1.2 9.1 0.1 2.1 2 0 0 2 2 2 0 NACHT domain DUF1724 PF08350.10 gi|73668593|ref|YP_304608.1| - 1.5e-23 82.7 0.1 2.6e-23 81.9 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) Corona_RPol_N PF06478.13 gi|73668593|ref|YP_304608.1| - 0.0011 18.0 1.2 0.0019 17.3 0.5 1.7 2 0 0 2 2 2 1 Coronavirus RPol N-terminus HTH_5 PF01022.20 gi|73668593|ref|YP_304608.1| - 0.0013 18.5 0.1 0.0024 17.7 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family SpoIISA_toxin PF14171.6 gi|73668593|ref|YP_304608.1| - 0.0095 15.7 0.2 4 7.1 0.0 2.1 2 0 0 2 2 2 2 Toxin SpoIISA, type II toxin-antitoxin system cobW PF02492.19 gi|73668594|ref|YP_304609.1| - 1.1e-31 109.8 0.3 1.3e-31 109.6 0.3 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.14 gi|73668594|ref|YP_304609.1| - 1.2e-06 28.4 0.1 2.6e-06 27.4 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B MeaB PF03308.16 gi|73668594|ref|YP_304609.1| - 2.5e-05 23.4 0.2 0.00015 20.9 0.1 2.0 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 gi|73668594|ref|YP_304609.1| - 5.8e-05 22.5 0.1 8.9e-05 21.9 0.1 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_30 PF13604.6 gi|73668594|ref|YP_304609.1| - 9.4e-05 22.2 0.1 0.00015 21.6 0.1 1.3 1 0 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 gi|73668594|ref|YP_304609.1| - 0.00011 22.1 0.1 0.00095 19.0 0.1 2.0 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein SRP54 PF00448.22 gi|73668594|ref|YP_304609.1| - 0.00015 21.5 0.1 0.00027 20.6 0.1 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_16 PF13191.6 gi|73668594|ref|YP_304609.1| - 0.00055 20.4 0.1 0.001 19.5 0.1 1.4 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73668594|ref|YP_304609.1| - 0.00063 19.7 0.3 0.32 10.9 0.1 2.2 2 0 0 2 2 2 2 RsgA GTPase AAA_18 PF13238.6 gi|73668594|ref|YP_304609.1| - 0.0008 20.0 0.2 0.0046 17.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain TrwB_AAD_bind PF10412.9 gi|73668594|ref|YP_304609.1| - 0.0013 17.8 0.4 0.0024 16.8 0.4 1.4 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain KTI12 PF08433.10 gi|73668594|ref|YP_304609.1| - 0.0017 17.9 0.0 0.0022 17.5 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 NTPase_1 PF03266.15 gi|73668594|ref|YP_304609.1| - 0.0017 18.3 0.5 0.0036 17.2 0.4 1.6 1 1 0 1 1 1 1 NTPase AAA_22 PF13401.6 gi|73668594|ref|YP_304609.1| - 0.0024 18.1 0.2 0.0052 17.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|73668594|ref|YP_304609.1| - 0.0024 17.6 0.2 0.0045 16.7 0.2 1.5 1 0 0 1 1 1 1 Thymidylate kinase AAA_33 PF13671.6 gi|73668594|ref|YP_304609.1| - 0.0041 17.3 0.0 0.0069 16.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 gi|73668594|ref|YP_304609.1| - 0.0052 16.6 0.0 0.0085 15.9 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase T2SSE PF00437.20 gi|73668594|ref|YP_304609.1| - 0.0052 15.9 0.1 0.0072 15.4 0.1 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|73668594|ref|YP_304609.1| - 0.0067 16.9 0.3 0.0098 16.4 0.2 1.5 1 1 0 1 1 1 1 ABC transporter NACHT PF05729.12 gi|73668594|ref|YP_304609.1| - 0.0097 15.8 0.2 0.018 15.0 0.2 1.4 1 0 0 1 1 1 1 NACHT domain ATPase_2 PF01637.18 gi|73668594|ref|YP_304609.1| - 0.011 15.6 0.1 0.03 14.2 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea LpxK PF02606.14 gi|73668594|ref|YP_304609.1| - 0.015 14.4 0.1 0.026 13.7 0.1 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_19 PF13245.6 gi|73668594|ref|YP_304609.1| - 0.015 15.6 0.1 0.038 14.3 0.1 1.6 2 0 0 2 2 2 0 AAA domain APS_kinase PF01583.20 gi|73668594|ref|YP_304609.1| - 0.017 15.0 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase CbiA PF01656.23 gi|73668594|ref|YP_304609.1| - 0.019 15.0 1.5 0.029 14.4 1.5 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF463 PF04317.12 gi|73668594|ref|YP_304609.1| - 0.019 13.9 0.2 0.081 11.8 0.1 1.9 2 0 0 2 2 2 0 YcjX-like family, DUF463 PIF1 PF05970.14 gi|73668594|ref|YP_304609.1| - 0.026 13.7 0.0 0.033 13.4 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase PRK PF00485.18 gi|73668594|ref|YP_304609.1| - 0.039 13.7 0.0 0.055 13.2 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_17 PF13207.6 gi|73668594|ref|YP_304609.1| - 0.08 13.4 0.1 0.17 12.3 0.1 1.6 1 0 0 1 1 1 0 AAA domain Arf PF00025.21 gi|73668594|ref|YP_304609.1| - 0.13 11.7 0.3 6.6 6.2 0.1 2.1 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_28 PF13521.6 gi|73668594|ref|YP_304609.1| - 0.13 12.5 0.1 0.19 11.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain TBP PF00352.21 gi|73668595|ref|YP_304610.1| - 2e-55 184.7 0.3 1.5e-27 95.3 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|73668595|ref|YP_304610.1| - 3.7e-08 33.4 0.0 0.0021 18.1 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) B12-binding PF02310.19 gi|73668596|ref|YP_304611.1| - 3.7e-19 68.9 0.3 5.9e-19 68.3 0.3 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|73668596|ref|YP_304611.1| - 3.2e-15 56.3 1.5 7.7e-15 55.1 0.2 2.3 3 0 0 3 3 3 1 B12 binding domain Cu2_monoox_C PF03712.15 gi|73668596|ref|YP_304611.1| - 0.062 12.8 0.0 0.091 12.3 0.0 1.2 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, C-terminal domain MtaB PF12176.8 gi|73668597|ref|YP_304612.1| - 4.5e-230 764.2 6.0 5.1e-230 764.0 6.0 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit Gpr1_Fun34_YaaH PF01184.19 gi|73668598|ref|YP_304613.1| - 1.8e-32 112.7 28.0 2.1e-32 112.5 28.0 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Cation_efflux PF01545.21 gi|73668599|ref|YP_304614.1| - 3.1e-20 72.8 8.9 4e-20 72.4 8.9 1.2 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|73668599|ref|YP_304614.1| - 3.7e-17 62.2 0.1 5.9e-17 61.6 0.1 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF3975 PF13126.6 gi|73668599|ref|YP_304614.1| - 2.5 8.6 5.7 0.7 10.4 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3975) Hydantoinase_A PF01968.18 gi|73668600|ref|YP_304615.1| - 4.4e-33 114.8 2.2 1.2e-31 110.1 0.5 2.9 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|73668600|ref|YP_304615.1| - 8.5e-33 113.5 1.6 2.9e-28 98.8 0.2 3.4 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|73668600|ref|YP_304615.1| - 4.1e-07 29.0 1.1 0.0077 14.9 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|73668600|ref|YP_304615.1| - 0.0022 17.5 0.2 0.21 11.1 0.0 2.7 2 1 1 3 3 3 1 BadF/BadG/BcrA/BcrD ATPase family ROK PF00480.20 gi|73668600|ref|YP_304615.1| - 0.023 14.2 0.0 0.067 12.7 0.0 1.8 2 0 0 2 2 2 0 ROK family FtsA PF14450.6 gi|73668600|ref|YP_304615.1| - 0.036 14.5 0.3 2.5 8.6 0.0 2.9 2 0 0 2 2 2 0 Cell division protein FtsA StbA PF06406.11 gi|73668600|ref|YP_304615.1| - 0.08 12.2 0.1 0.22 10.7 0.0 1.7 2 0 0 2 2 2 0 StbA protein Hydant_A_N PF05378.13 gi|73668601|ref|YP_304616.1| - 7.6e-34 117.0 0.4 5.8e-29 101.1 0.1 3.4 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|73668601|ref|YP_304616.1| - 4.5e-30 104.9 3.5 5.5e-30 104.6 0.6 2.5 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|73668601|ref|YP_304616.1| - 5.9e-06 25.1 0.4 0.013 14.2 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|73668601|ref|YP_304616.1| - 0.0079 15.7 2.0 0.21 11.0 0.0 2.7 3 0 0 3 3 3 1 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.6 gi|73668601|ref|YP_304616.1| - 0.012 16.0 1.0 1.5 9.3 0.3 3.1 2 1 1 3 3 3 0 Cell division protein FtsA StbA PF06406.11 gi|73668601|ref|YP_304616.1| - 0.084 12.1 0.0 0.19 10.9 0.0 1.5 1 0 0 1 1 1 0 StbA protein Sda PF08970.10 gi|73668601|ref|YP_304616.1| - 0.17 11.7 0.1 0.86 9.4 0.0 2.1 2 0 0 2 2 2 0 Sporulation inhibitor A DUF1724 PF08350.10 gi|73668602|ref|YP_304617.1| - 2e-22 79.1 0.0 3.6e-22 78.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_45 PF14947.6 gi|73668602|ref|YP_304617.1| - 0.00057 19.8 1.5 0.00093 19.1 0.4 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix MarR PF01047.22 gi|73668602|ref|YP_304617.1| - 0.018 15.0 0.2 0.12 12.3 0.1 2.2 2 0 0 2 2 2 0 MarR family HemN_C PF06969.16 gi|73668602|ref|YP_304617.1| - 0.057 13.5 0.0 2.6 8.2 0.0 2.8 3 0 0 3 3 3 0 HemN C-terminal domain TrmB PF01978.19 gi|73668602|ref|YP_304617.1| - 0.069 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|73668602|ref|YP_304617.1| - 0.1 13.1 0.1 0.27 11.8 0.1 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF1724 PF08350.10 gi|73668603|ref|YP_304618.1| - 3.7e-22 78.2 0.4 1.2e-21 76.6 0.2 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|73668603|ref|YP_304618.1| - 0.0013 18.5 0.3 0.0026 17.6 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family ParcG PF10274.9 gi|73668603|ref|YP_304618.1| - 0.053 13.6 0.2 0.12 12.5 0.2 1.6 1 0 0 1 1 1 0 Parkin co-regulated protein HTH_27 PF13463.6 gi|73668603|ref|YP_304618.1| - 0.14 12.7 0.0 0.25 11.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HicB-like_2 PF15970.5 gi|73668604|ref|YP_304619.1| - 0.15 12.3 0.1 0.34 11.1 0.1 1.6 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system MMR_HSR1_C PF08438.10 gi|73668606|ref|YP_304621.1| - 7.1e-34 116.7 0.0 1.2e-33 116.1 0.0 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|73668606|ref|YP_304621.1| - 2.7e-19 69.3 0.0 1.2e-18 67.2 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.21 gi|73668606|ref|YP_304621.1| - 1.1e-13 51.0 0.0 2.5e-13 49.9 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|73668606|ref|YP_304621.1| - 1.8e-08 34.1 0.9 6e-07 29.1 0.1 2.7 3 0 0 3 3 3 1 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 gi|73668606|ref|YP_304621.1| - 0.014 15.4 0.0 0.027 14.5 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Prenyltransf PF01255.19 gi|73668607|ref|YP_304622.1| - 5.3e-29 101.4 0.0 5e-27 94.9 0.0 2.1 1 1 0 2 2 2 2 Putative undecaprenyl diphosphate synthase Rib PF08428.10 gi|73668607|ref|YP_304622.1| - 0.097 12.7 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 Rib/alpha-like repeat DUF1922 PF09082.10 gi|73668608|ref|YP_304623.1| - 0.00093 19.4 0.2 0.0018 18.5 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1922) Zn_Tnp_IS1595 PF12760.7 gi|73668608|ref|YP_304623.1| - 0.0085 16.0 2.5 0.014 15.4 2.5 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|73668608|ref|YP_304623.1| - 0.045 13.3 0.0 0.096 12.2 0.0 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding YdaS_antitoxin PF15943.5 gi|73668608|ref|YP_304623.1| - 0.065 13.1 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Ribosomal_S27e PF01667.17 gi|73668608|ref|YP_304623.1| - 0.089 12.5 3.7 0.089 12.5 2.1 1.8 2 0 0 2 2 2 0 Ribosomal protein S27 zinc-ribbons_6 PF07191.12 gi|73668608|ref|YP_304623.1| - 0.093 12.7 1.4 0.16 12.0 1.4 1.3 1 0 0 1 1 1 0 zinc-ribbons Lar_restr_allev PF14354.6 gi|73668608|ref|YP_304623.1| - 0.12 12.7 0.1 0.23 11.9 0.1 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar Ogr_Delta PF04606.12 gi|73668608|ref|YP_304623.1| - 0.13 12.2 0.7 7 6.7 0.2 2.3 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-ribbon_3 PF13248.6 gi|73668608|ref|YP_304623.1| - 0.15 11.6 1.4 8.2 6.0 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|73668608|ref|YP_304623.1| - 0.15 11.8 1.4 0.27 11.0 1.4 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein zinc_ribbon_2 PF13240.6 gi|73668608|ref|YP_304623.1| - 0.2 11.4 2.8 2.1 8.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-ACC PF17848.1 gi|73668608|ref|YP_304623.1| - 0.24 11.5 4.7 3.1 8.0 0.1 2.8 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf_UBZ PF18439.1 gi|73668608|ref|YP_304623.1| - 1.3 8.6 3.8 10 5.8 0.1 2.8 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-BED PF02892.15 gi|73668608|ref|YP_304623.1| - 1.4 9.0 4.8 0.36 10.9 0.9 2.0 2 1 1 3 3 3 0 BED zinc finger zinc_ribbon_4 PF13717.6 gi|73668608|ref|YP_304623.1| - 2 8.4 6.5 13 5.8 6.5 2.2 1 1 0 1 1 1 0 zinc-ribbon domain NRD1_2 PF01995.16 gi|73668609|ref|YP_304624.1| - 1.3e-93 312.6 0.6 1.8e-93 312.2 0.6 1.2 1 0 0 1 1 1 1 NrpR regulatory domains NRD1 and 2 HTH_12 PF08461.10 gi|73668609|ref|YP_304624.1| - 1.4e-31 108.3 1.1 3.2e-31 107.1 1.1 1.7 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_21 PF13276.6 gi|73668609|ref|YP_304624.1| - 0.023 14.8 0.3 0.048 13.8 0.3 1.5 1 0 0 1 1 1 0 HTH-like domain HTH_20 PF12840.7 gi|73668609|ref|YP_304624.1| - 0.19 11.8 0.0 0.47 10.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Lactamase_B PF00753.27 gi|73668610|ref|YP_304625.1| - 1.6e-12 47.9 0.1 2.8e-12 47.1 0.1 1.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|73668610|ref|YP_304625.1| - 5.5e-10 39.1 0.0 9e-10 38.4 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|73668610|ref|YP_304625.1| - 0.048 13.1 0.0 0.068 12.6 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain ABC_tran PF00005.27 gi|73668611|ref|YP_304626.1| - 8.2e-21 75.0 0.0 1.7e-20 73.9 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|73668611|ref|YP_304626.1| - 1.1e-07 32.0 0.1 0.00038 20.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668611|ref|YP_304626.1| - 3e-05 23.6 0.1 0.0065 15.9 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|73668611|ref|YP_304626.1| - 0.0016 19.0 0.1 0.0035 17.9 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_27 PF13514.6 gi|73668611|ref|YP_304626.1| - 0.0045 16.6 0.0 0.0069 16.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73668611|ref|YP_304626.1| - 0.01 15.6 0.6 0.021 14.6 0.0 1.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|73668611|ref|YP_304626.1| - 0.012 15.5 0.0 0.021 14.7 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_13 PF13166.6 gi|73668611|ref|YP_304626.1| - 0.028 13.1 0.1 0.04 12.6 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|73668611|ref|YP_304626.1| - 0.096 12.4 0.0 0.24 11.1 0.0 1.6 1 1 0 2 2 2 0 AAA ATPase domain ATPase_2 PF01637.18 gi|73668611|ref|YP_304626.1| - 0.11 12.3 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea UPF0051 PF01458.17 gi|73668612|ref|YP_304627.1| - 3e-56 190.5 0.1 5.5e-56 189.7 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) TrmB PF01978.19 gi|73668613|ref|YP_304628.1| - 8.1e-06 25.6 0.1 1.1e-05 25.2 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|73668613|ref|YP_304628.1| - 0.0012 18.7 0.1 0.002 18.0 0.1 1.4 1 0 0 1 1 1 1 MarR family Rio2_N PF09202.11 gi|73668613|ref|YP_304628.1| - 0.0016 18.6 0.1 0.0024 18.0 0.1 1.4 1 0 0 1 1 1 1 Rio2, N-terminal Fe_dep_repress PF01325.19 gi|73668613|ref|YP_304628.1| - 0.0018 18.4 0.1 0.0054 16.9 0.1 1.9 1 1 1 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain TFIIE_alpha PF02002.17 gi|73668613|ref|YP_304628.1| - 0.0059 16.5 3.0 0.0081 16.0 3.0 1.3 1 1 0 1 1 1 1 TFIIE alpha subunit HTH_36 PF13730.6 gi|73668613|ref|YP_304628.1| - 0.0092 15.9 0.1 0.015 15.2 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|73668613|ref|YP_304628.1| - 0.02 15.3 0.3 0.024 15.0 0.3 1.2 1 0 0 1 1 1 0 Penicillinase repressor Cullin_Nedd8 PF10557.9 gi|73668613|ref|YP_304628.1| - 0.078 13.0 1.6 0.11 12.5 0.4 1.8 2 0 0 2 2 2 0 Cullin protein neddylation domain HTH_11 PF08279.12 gi|73668613|ref|YP_304628.1| - 0.088 12.8 0.1 0.15 12.1 0.1 1.5 1 1 0 1 1 1 0 HTH domain Fer4_5 PF12801.7 gi|73668614|ref|YP_304629.1| - 2.5e-14 52.9 12.0 1.4e-11 44.1 4.1 3.2 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73668614|ref|YP_304629.1| - 2.4e-10 40.4 27.3 9.2e-07 28.9 15.9 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73668614|ref|YP_304629.1| - 1.3e-09 37.5 13.4 2.1e-06 27.3 3.4 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73668614|ref|YP_304629.1| - 1.5e-09 37.5 14.5 6.2e-05 22.9 2.4 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73668614|ref|YP_304629.1| - 9.8e-09 35.4 6.4 1.9e-08 34.5 6.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668614|ref|YP_304629.1| - 1.9e-07 31.5 18.3 0.00032 21.2 2.0 3.3 3 2 0 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73668614|ref|YP_304629.1| - 4.6e-07 29.9 14.4 9.6e-05 22.4 1.7 2.6 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668614|ref|YP_304629.1| - 8e-07 29.9 12.8 0.0016 19.3 2.3 3.0 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|73668614|ref|YP_304629.1| - 3.9e-06 26.9 17.4 3.9e-06 26.9 17.4 2.7 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668614|ref|YP_304629.1| - 6.2e-06 26.0 13.0 0.00018 21.4 1.0 3.1 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73668614|ref|YP_304629.1| - 8.5e-05 22.8 25.5 0.0045 17.4 5.7 3.3 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73668614|ref|YP_304629.1| - 0.00011 22.7 19.3 0.056 14.0 7.1 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73668614|ref|YP_304629.1| - 0.0019 19.0 4.2 0.0019 19.0 4.2 3.6 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|73668614|ref|YP_304629.1| - 0.0051 17.6 11.5 0.13 13.1 1.9 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73668614|ref|YP_304629.1| - 0.023 15.2 18.0 0.027 15.0 2.1 2.7 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|73668614|ref|YP_304629.1| - 0.026 15.0 20.3 0.21 12.0 4.6 2.6 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73668614|ref|YP_304629.1| - 0.53 11.1 8.0 7.2 7.4 0.4 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain PRA1 PF03208.19 gi|73668614|ref|YP_304629.1| - 5.9 6.5 7.2 18 4.9 7.2 1.7 1 1 0 1 1 1 0 PRA1 family protein FAD_binding_4 PF01565.23 gi|73668615|ref|YP_304630.1| - 1.8e-35 121.7 0.0 3.5e-35 120.8 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain CCG PF02754.16 gi|73668615|ref|YP_304630.1| - 4.9e-30 103.6 0.3 2.6e-14 53.2 0.0 2.7 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_17 PF13534.6 gi|73668615|ref|YP_304630.1| - 5.9e-09 36.3 7.7 1.8e-08 34.8 7.7 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73668615|ref|YP_304630.1| - 1.1e-05 25.8 6.8 2.8e-05 24.5 6.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73668615|ref|YP_304630.1| - 0.00044 20.3 3.0 0.00044 20.3 3.0 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73668615|ref|YP_304630.1| - 0.001 19.6 5.9 0.0027 18.3 5.9 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain FAD-oxidase_C PF02913.19 gi|73668615|ref|YP_304630.1| - 0.0078 15.9 0.0 1.1 8.8 0.0 2.6 2 0 0 2 2 2 1 FAD linked oxidases, C-terminal domain Fer4_10 PF13237.6 gi|73668615|ref|YP_304630.1| - 0.6 10.3 13.0 0.43 10.7 9.3 2.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain DUF2795 PF11387.8 gi|73668616|ref|YP_304631.1| - 7.7e-26 90.0 0.1 2e-12 47.1 0.0 2.5 2 1 0 2 2 2 2 Protein of unknown function (DUF2795) DUF349 PF03993.12 gi|73668616|ref|YP_304631.1| - 0.00035 20.8 4.6 0.026 14.8 0.2 2.3 1 1 1 2 2 2 2 Domain of Unknown Function (DUF349) CdiI_2 PF18593.1 gi|73668616|ref|YP_304631.1| - 0.00086 19.9 0.5 0.095 13.4 0.1 2.1 1 1 1 2 2 2 1 CdiI immunity protein PTS_IIA PF02255.16 gi|73668616|ref|YP_304631.1| - 0.0054 16.8 3.2 0.7 10.0 0.1 3.3 1 1 3 4 4 4 1 PTS system, Lactose/Cellobiose specific IIA subunit Myb_DNA-bind_3 PF12776.7 gi|73668616|ref|YP_304631.1| - 0.0056 17.6 0.5 3.5 8.7 0.1 2.1 1 1 1 2 2 2 2 Myb/SANT-like DNA-binding domain PspB PF06667.12 gi|73668616|ref|YP_304631.1| - 0.016 15.2 0.2 7 6.8 0.0 2.3 2 0 0 2 2 2 0 Phage shock protein B DUF573 PF04504.14 gi|73668616|ref|YP_304631.1| - 0.022 15.4 1.7 0.75 10.5 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function, DUF573 SOR_SNZ PF01680.17 gi|73668616|ref|YP_304631.1| - 0.048 13.4 1.9 0.86 9.4 0.1 2.1 1 1 1 2 2 2 0 SOR/SNZ family rpo30_N PF12410.8 gi|73668616|ref|YP_304631.1| - 0.055 13.4 0.9 0.47 10.4 0.6 2.0 1 1 1 2 2 2 0 Poxvirus DNA dependent RNA polymerase 30kDa subunit HTH_Tnp_Tc5 PF03221.16 gi|73668616|ref|YP_304631.1| - 0.065 13.3 0.4 0.98 9.5 0.1 2.2 2 0 0 2 2 2 0 Tc5 transposase DNA-binding domain UBA_2 PF08587.11 gi|73668616|ref|YP_304631.1| - 0.12 12.5 0.3 21 5.3 0.0 3.2 3 0 0 3 3 3 0 Ubiquitin associated domain (UBA) Cpn60_TCP1 PF00118.24 gi|73668617|ref|YP_304632.1| - 5.3e-180 599.2 20.3 6e-180 599.1 20.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF473 PF04322.12 gi|73668618|ref|YP_304633.1| - 1.5e-43 147.4 0.4 1.7e-43 147.2 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF473) DUF918 PF06033.11 gi|73668618|ref|YP_304633.1| - 0.015 15.3 0.0 0.019 15.0 0.0 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF918) SNF PF00209.18 gi|73668618|ref|YP_304633.1| - 0.22 10.2 0.0 0.24 10.1 0.0 1.0 1 0 0 1 1 1 0 Sodium:neurotransmitter symporter family PAC2 PF09754.9 gi|73668619|ref|YP_304634.1| - 1.6e-49 168.8 0.5 1.8e-49 168.6 0.5 1.0 1 0 0 1 1 1 1 PAC2 family PK_C PF02887.16 gi|73668620|ref|YP_304635.1| - 9.9e-17 61.3 0.5 1.2e-16 61.0 0.5 1.1 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain UvsW PF11637.8 gi|73668620|ref|YP_304635.1| - 0.032 14.3 0.2 0.063 13.4 0.2 1.5 1 0 0 1 1 1 0 ATP-dependant DNA helicase UvsW Asp_Glu_race PF01177.22 gi|73668620|ref|YP_304635.1| - 0.056 13.3 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Asp/Glu/Hydantoin racemase Semialdhyde_dh PF01118.24 gi|73668620|ref|YP_304635.1| - 0.082 13.3 0.1 0.19 12.2 0.0 1.7 2 1 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain TGT PF01702.18 gi|73668621|ref|YP_304636.1| - 6.1e-87 292.0 0.0 7.9e-87 291.6 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase DUF5591 PF17884.1 gi|73668621|ref|YP_304636.1| - 0.065 13.1 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5591) UbiA PF01040.18 gi|73668622|ref|YP_304637.1| - 1.9e-39 135.5 16.8 2.5e-39 135.1 16.8 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family RseC_MucC PF04246.12 gi|73668622|ref|YP_304637.1| - 0.35 10.8 3.5 1.4 8.9 0.7 2.5 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC HI0933_like PF03486.14 gi|73668623|ref|YP_304638.1| - 1.9e-11 43.4 1.1 2.2e-07 30.0 0.2 2.2 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_3 PF13738.6 gi|73668623|ref|YP_304638.1| - 5.4e-10 39.0 1.7 1.3e-08 34.5 1.3 2.7 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|73668623|ref|YP_304638.1| - 5.9e-10 39.3 0.0 3.2e-05 23.7 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|73668623|ref|YP_304638.1| - 2.1e-08 33.7 0.0 4.2e-08 32.6 0.0 1.4 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_2 PF07992.14 gi|73668623|ref|YP_304638.1| - 3.2e-08 33.2 7.6 0.0013 18.0 0.1 3.2 2 2 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|73668623|ref|YP_304638.1| - 4.5e-07 29.4 0.0 0.00031 20.1 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|73668623|ref|YP_304638.1| - 1.2e-06 28.1 0.2 2.4e-06 27.2 0.2 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|73668623|ref|YP_304638.1| - 1.7e-05 25.3 0.4 0.68 10.5 0.0 3.3 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|73668623|ref|YP_304638.1| - 7.6e-05 22.0 0.0 0.00018 20.7 0.0 1.6 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|73668623|ref|YP_304638.1| - 0.00012 21.3 0.4 0.00056 19.1 0.3 2.1 2 1 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|73668623|ref|YP_304638.1| - 0.0016 18.6 0.0 0.0051 17.0 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|73668623|ref|YP_304638.1| - 0.0022 17.3 0.3 0.0022 17.3 0.3 2.1 2 1 0 2 2 2 1 Thi4 family Amino_oxidase PF01593.24 gi|73668623|ref|YP_304638.1| - 0.023 14.0 1.0 4.4 6.5 0.1 2.4 3 0 0 3 3 3 0 Flavin containing amine oxidoreductase Trp_halogenase PF04820.14 gi|73668623|ref|YP_304638.1| - 0.082 11.7 0.1 6.9 5.4 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase AlaDh_PNT_C PF01262.21 gi|73668623|ref|YP_304638.1| - 0.086 12.1 2.1 0.099 11.9 0.1 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Radical_SAM PF04055.21 gi|73668624|ref|YP_304639.1| - 1.1e-19 71.4 0.0 1.7e-19 70.8 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|73668624|ref|YP_304639.1| - 1.5e-05 25.4 0.3 3.3e-05 24.3 0.3 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|73668624|ref|YP_304639.1| - 6.1e-05 23.3 0.0 0.0001 22.6 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73668624|ref|YP_304639.1| - 0.001 19.2 0.0 0.0022 18.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Acetyltransf_1 PF00583.25 gi|73668625|ref|YP_304640.1| - 5.5e-08 33.1 0.0 8.7e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|73668625|ref|YP_304640.1| - 4.8e-05 23.3 0.0 9.8e-05 22.3 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73668625|ref|YP_304640.1| - 5e-05 23.7 0.0 8.8e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 gi|73668625|ref|YP_304640.1| - 0.00028 20.6 0.0 0.00039 20.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ DUF3787 PF12655.7 gi|73668625|ref|YP_304640.1| - 0.072 13.0 0.5 0.31 11.0 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3787) DivIVA PF05103.13 gi|73668626|ref|YP_304641.1| - 0.018 15.1 13.3 0.018 15.1 13.3 3.6 1 1 2 3 3 2 0 DivIVA protein DUF2935 PF11155.8 gi|73668626|ref|YP_304641.1| - 0.019 15.3 9.1 0.11 12.9 2.5 3.2 1 1 2 3 3 3 0 Domain of unknown function (DUF2935) DUF3577 PF12101.8 gi|73668626|ref|YP_304641.1| - 0.11 12.3 4.4 0.067 13.0 1.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3577) CALCOCO1 PF07888.11 gi|73668626|ref|YP_304641.1| - 0.33 9.7 40.0 0.12 11.2 36.2 1.8 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Sec34 PF04136.15 gi|73668626|ref|YP_304641.1| - 0.39 10.6 19.9 0.045 13.6 6.0 3.1 1 1 1 3 3 3 0 Sec34-like family ERM PF00769.19 gi|73668626|ref|YP_304641.1| - 2.7 7.8 46.0 0.83 9.4 20.5 2.1 1 1 1 2 2 2 0 Ezrin/radixin/moesin family Seryl_tRNA_N PF02403.22 gi|73668626|ref|YP_304641.1| - 8.2 6.7 47.5 0.23 11.7 16.2 4.0 1 1 3 4 4 4 0 Seryl-tRNA synthetase N-terminal domain MAD PF05557.13 gi|73668626|ref|YP_304641.1| - 8.7 4.6 44.0 1.2 7.4 14.3 2.1 1 1 0 2 2 2 0 Mitotic checkpoint protein HAD PF12710.7 gi|73668627|ref|YP_304642.1| - 1.8e-21 77.4 0.0 2.3e-21 77.1 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73668627|ref|YP_304642.1| - 1.9e-16 61.0 0.3 3.4e-16 60.2 0.3 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|73668627|ref|YP_304642.1| - 1.9e-09 37.7 0.0 4.7e-07 29.8 0.0 2.9 2 1 1 3 3 3 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|73668627|ref|YP_304642.1| - 3e-07 30.1 0.1 0.0034 16.8 0.0 2.1 2 0 0 2 2 2 2 Putative Phosphatase HAD_2 PF13419.6 gi|73668627|ref|YP_304642.1| - 6.7e-07 29.5 0.3 0.016 15.3 0.4 3.1 2 1 0 2 2 2 2 Haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|73668627|ref|YP_304642.1| - 0.022 14.3 0.0 2.4 7.6 0.0 2.1 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase DUF705 PF05152.12 gi|73668627|ref|YP_304642.1| - 0.18 11.2 0.0 0.31 10.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF705) MTD PF01993.18 gi|73668628|ref|YP_304643.1| - 1.2e-126 421.6 0.9 1.4e-126 421.5 0.9 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase DUF2111 PF09884.9 gi|73668629|ref|YP_304644.1| - 2.3e-35 120.5 1.2 4.3e-35 119.6 1.2 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) DUF166 PF02593.14 gi|73668630|ref|YP_304645.1| - 7.6e-62 208.7 0.0 8.7e-62 208.5 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DapB_N PF01113.20 gi|73668630|ref|YP_304645.1| - 0.014 15.5 0.0 0.079 13.1 0.0 1.9 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Thymidylate_kin PF02223.17 gi|73668631|ref|YP_304646.1| - 1.3e-44 152.1 0.0 1.6e-44 151.8 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_18 PF13238.6 gi|73668631|ref|YP_304646.1| - 2.5e-05 24.8 0.0 7.1e-05 23.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|73668631|ref|YP_304646.1| - 4e-05 23.9 0.0 5.2e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|73668631|ref|YP_304646.1| - 0.00033 20.8 0.0 0.00062 20.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|73668631|ref|YP_304646.1| - 0.0011 19.4 0.1 0.011 16.1 0.1 2.3 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|73668631|ref|YP_304646.1| - 0.0078 16.1 0.0 0.015 15.1 0.0 1.8 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_22 PF13401.6 gi|73668631|ref|YP_304646.1| - 0.025 14.9 0.0 0.048 13.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain APS_kinase PF01583.20 gi|73668631|ref|YP_304646.1| - 0.043 13.7 0.0 0.079 12.8 0.0 1.6 1 1 0 1 1 1 0 Adenylylsulphate kinase KTI12 PF08433.10 gi|73668631|ref|YP_304646.1| - 0.077 12.4 0.1 0.19 11.1 0.1 1.7 1 1 0 1 1 1 0 Chromatin associated protein KTI12 AAA_16 PF13191.6 gi|73668631|ref|YP_304646.1| - 0.099 13.0 0.0 0.17 12.3 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 gi|73668631|ref|YP_304646.1| - 0.1 12.7 0.1 0.37 10.9 0.1 1.7 2 1 0 2 2 2 0 50S ribosome-binding GTPase CKS PF01111.19 gi|73668631|ref|YP_304646.1| - 0.13 12.5 0.1 0.24 11.7 0.1 1.4 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit CPT PF07931.12 gi|73668631|ref|YP_304646.1| - 0.21 11.4 0.0 0.58 10.0 0.0 1.7 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein His_biosynth PF00977.21 gi|73668633|ref|YP_304648.1| - 5.4e-30 104.5 0.0 6.5e-30 104.3 0.0 1.1 1 0 0 1 1 1 1 Histidine biosynthesis protein Trp_syntA PF00290.20 gi|73668633|ref|YP_304648.1| - 0.056 12.3 0.0 0.084 11.7 0.0 1.2 1 0 0 1 1 1 0 Tryptophan synthase alpha chain 4HFCP_synth PF04476.13 gi|73668634|ref|YP_304649.1| - 6.9e-91 304.0 0.0 7.7e-91 303.8 0.0 1.0 1 0 0 1 1 1 1 4-HFC-P synthase QRPTase_C PF01729.19 gi|73668634|ref|YP_304649.1| - 0.02 14.7 0.0 0.068 12.9 0.0 1.8 1 1 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain YdjM PF04307.14 gi|73668635|ref|YP_304650.1| - 2.3e-16 59.6 1.8 2.8e-16 59.3 1.8 1.1 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF3201 PF11447.8 gi|73668635|ref|YP_304650.1| - 0.0065 16.0 0.1 0.0098 15.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3201) Polysacc_deac_1 PF01522.21 gi|73668637|ref|YP_304652.1| - 4.3e-20 71.9 0.0 5.9e-20 71.4 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF3473 PF11959.8 gi|73668637|ref|YP_304652.1| - 1.2e-07 31.8 0.0 2.3e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) DUF2334 PF10096.9 gi|73668637|ref|YP_304652.1| - 0.0013 18.4 0.0 0.0025 17.5 0.0 1.7 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Disaggr_assoc PF08480.10 gi|73668638|ref|YP_304653.1| - 3.7e-86 287.9 11.9 3.7e-86 287.9 11.9 2.4 2 0 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.6 gi|73668638|ref|YP_304653.1| - 2.4e-20 73.0 48.8 8.9e-14 51.6 20.6 2.7 2 1 1 3 3 3 2 Right handed beta helix region DUF5123 PF17161.4 gi|73668638|ref|YP_304653.1| - 0.00065 20.8 2.4 0.00065 20.8 2.4 3.8 2 2 2 4 4 4 1 Domain of unknown function (DUF5123) DUF5492 PF17596.2 gi|73668638|ref|YP_304653.1| - 0.086 13.2 0.3 0.086 13.2 0.3 2.5 3 0 0 3 3 3 0 Family of unknown function (DUF5492) Hexapep PF00132.24 gi|73668639|ref|YP_304654.1| - 7.2e-09 35.0 13.7 4.2e-06 26.3 4.8 2.4 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73668639|ref|YP_304654.1| - 0.0001 22.0 13.7 0.0018 18.0 5.1 2.9 2 1 1 3 3 3 2 Hexapeptide repeat of succinyl-transferase Disaggr_repeat PF06848.11 gi|73668640|ref|YP_304655.1| - 9.5e-84 279.5 5.0 1.9e-83 278.5 5.0 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|73668640|ref|YP_304655.1| - 1.1e-72 243.9 11.3 1.1e-72 243.9 11.3 2.2 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|73668640|ref|YP_304655.1| - 7.5e-15 55.1 44.7 7e-10 39.0 23.5 2.7 1 1 1 2 2 2 2 Right handed beta helix region DUF4277 PF14104.6 gi|73668641|ref|YP_304656.1| - 3.7e-43 146.3 0.0 7.4e-43 145.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|73668641|ref|YP_304656.1| - 6.4e-18 65.2 1.5 2.3e-17 63.4 1.5 1.8 1 1 0 1 1 1 1 Transposase DDE domain Glycos_transf_2 PF00535.26 gi|73668642|ref|YP_304657.1| - 9.2e-25 87.4 0.0 4e-21 75.6 0.0 2.8 3 0 0 3 3 3 2 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|73668642|ref|YP_304657.1| - 2.8e-07 31.0 0.0 0.00021 21.8 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73668642|ref|YP_304657.1| - 0.00078 19.4 0.0 0.011 15.7 0.0 2.2 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|73668642|ref|YP_304657.1| - 0.0032 17.0 0.0 1.6 8.1 0.0 2.2 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Polysacc_deac_1 PF01522.21 gi|73668643|ref|YP_304658.1| - 0.0052 16.7 0.0 0.039 13.8 0.0 2.2 1 1 0 1 1 1 1 Polysaccharide deacetylase Polysacc_synt_3 PF13440.6 gi|73668645|ref|YP_304660.1| - 2e-20 73.2 16.1 2e-20 73.2 16.1 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|73668645|ref|YP_304660.1| - 1.1e-16 61.1 22.1 1.1e-16 61.1 22.1 2.9 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein MurJ PF03023.14 gi|73668645|ref|YP_304660.1| - 3.2e-10 39.2 16.7 3.2e-10 39.2 16.7 2.8 1 1 2 3 3 3 1 Lipid II flippase MurJ Acetyltransf_6 PF13480.7 gi|73668646|ref|YP_304661.1| - 5.3e-12 46.1 0.0 3.2e-11 43.6 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|73668646|ref|YP_304661.1| - 0.00039 19.4 0.0 1.1 8.1 0.0 3.0 2 1 1 3 3 3 2 FemAB family FemAB_like PF04339.12 gi|73668646|ref|YP_304661.1| - 0.0063 15.7 0.0 0.016 14.4 0.0 1.7 1 1 0 1 1 1 1 Peptidogalycan biosysnthesis/recognition Glycos_transf_1 PF00534.20 gi|73668647|ref|YP_304662.1| - 6.2e-30 104.0 0.0 1.5e-29 102.7 0.0 1.6 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73668647|ref|YP_304662.1| - 9.7e-28 97.3 0.0 1.4e-27 96.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73668647|ref|YP_304662.1| - 2.6e-17 63.4 0.0 4.2e-17 62.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|73668647|ref|YP_304662.1| - 3e-09 37.2 0.0 5.5e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|73668647|ref|YP_304662.1| - 3.5e-05 23.8 0.0 7.1e-05 22.9 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.6 gi|73668647|ref|YP_304662.1| - 0.0037 17.7 0.0 0.0071 16.8 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_2 PF00535.26 gi|73668648|ref|YP_304663.1| - 9.7e-17 61.3 0.0 2e-16 60.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73668648|ref|YP_304663.1| - 7.4e-06 26.0 0.0 1.8e-05 24.7 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|73668648|ref|YP_304663.1| - 0.00022 21.2 0.0 0.00077 19.4 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.6 gi|73668648|ref|YP_304663.1| - 0.024 15.1 0.0 0.074 13.6 0.0 1.8 2 0 0 2 2 2 0 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|73668648|ref|YP_304663.1| - 0.16 11.4 0.0 0.35 10.3 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 21 Polysacc_deac_1 PF01522.21 gi|73668649|ref|YP_304664.1| - 0.0017 18.2 0.0 0.0058 16.5 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide deacetylase DUF3362 PF11842.8 gi|73668649|ref|YP_304664.1| - 0.15 12.4 0.0 0.25 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3362) DUF354 PF04007.12 gi|73668650|ref|YP_304665.1| - 3.5e-20 72.4 0.0 4e-20 72.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|73668650|ref|YP_304665.1| - 0.11 12.5 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like HTH_psq PF05225.16 gi|73668650|ref|YP_304665.1| - 0.17 11.7 0.0 0.35 10.6 0.0 1.5 1 0 0 1 1 1 0 helix-turn-helix, Psq domain UDPG_MGDP_dh_N PF03721.14 gi|73668652|ref|YP_304667.1| - 5e-47 159.9 1.3 5.5e-47 159.8 1.3 1.0 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 gi|73668652|ref|YP_304667.1| - 1.2e-06 28.5 0.2 3.2e-06 27.2 0.0 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|73668652|ref|YP_304667.1| - 7e-06 26.1 0.0 1.8e-05 24.8 0.0 1.8 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 gi|73668652|ref|YP_304667.1| - 9.3e-05 22.1 0.1 0.0002 21.1 0.0 1.7 1 1 1 2 2 2 1 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 gi|73668652|ref|YP_304667.1| - 0.00028 20.2 0.0 0.00036 19.8 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 gi|73668652|ref|YP_304667.1| - 0.00038 21.0 0.1 0.0019 18.7 0.0 2.1 1 1 1 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|73668652|ref|YP_304667.1| - 0.00047 20.4 0.1 0.00093 19.4 0.1 1.5 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox PF00070.27 gi|73668652|ref|YP_304667.1| - 0.0012 19.4 0.1 0.0024 18.4 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|73668652|ref|YP_304667.1| - 0.0035 16.7 0.2 0.0045 16.3 0.1 1.3 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.6 gi|73668652|ref|YP_304667.1| - 0.0069 16.6 1.3 0.06 13.6 0.2 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 gi|73668652|ref|YP_304667.1| - 0.0075 16.5 0.2 0.026 14.8 0.1 1.8 2 0 0 2 2 2 1 TrkA-N domain Sacchrp_dh_NADP PF03435.18 gi|73668652|ref|YP_304667.1| - 0.016 15.5 0.0 0.027 14.7 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Rossmann-like PF10727.9 gi|73668652|ref|YP_304667.1| - 0.017 15.0 0.3 0.057 13.3 0.0 1.9 2 0 0 2 2 2 0 Rossmann-like domain GFO_IDH_MocA PF01408.22 gi|73668652|ref|YP_304667.1| - 0.018 15.8 0.1 0.031 15.1 0.1 1.5 1 1 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 gi|73668652|ref|YP_304667.1| - 0.019 14.3 0.0 0.029 13.7 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|73668652|ref|YP_304667.1| - 0.071 13.6 0.1 0.21 12.0 0.0 1.7 1 1 1 2 2 2 0 Putative NAD(P)-binding FAD_binding_3 PF01494.19 gi|73668652|ref|YP_304667.1| - 0.11 11.7 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain UDPG_MGDP_dh PF00984.19 gi|73668653|ref|YP_304668.1| - 6.4e-38 128.9 0.1 1.2e-37 127.9 0.1 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|73668653|ref|YP_304668.1| - 5.5e-30 103.9 0.1 1.1e-29 102.9 0.1 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh_N PF03721.14 gi|73668653|ref|YP_304668.1| - 3.5e-12 46.3 0.0 5.9e-12 45.6 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_11 PF14833.6 gi|73668653|ref|YP_304668.1| - 0.054 13.7 0.1 0.14 12.4 0.1 1.8 1 1 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NTP_transferase PF00483.23 gi|73668654|ref|YP_304669.1| - 6.4e-30 104.5 0.0 8.1e-30 104.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|73668654|ref|YP_304669.1| - 1.1e-08 35.6 0.0 2.1e-08 34.7 0.0 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain Smr PF01713.21 gi|73668654|ref|YP_304669.1| - 0.0059 16.9 0.0 0.19 12.1 0.0 2.8 3 0 0 3 3 3 1 Smr domain IspD PF01128.19 gi|73668654|ref|YP_304669.1| - 0.011 15.5 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.26 gi|73668654|ref|YP_304669.1| - 0.051 13.4 0.0 0.081 12.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 CTP_transf_3 PF02348.19 gi|73668654|ref|YP_304669.1| - 0.14 12.1 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Cytidylyltransferase Epimerase PF01370.21 gi|73668655|ref|YP_304670.1| - 1.3e-51 175.4 0.0 1.5e-51 175.2 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|73668655|ref|YP_304670.1| - 5.4e-48 164.1 0.0 1.5e-47 162.6 0.0 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|73668655|ref|YP_304670.1| - 5.8e-21 74.7 0.0 7.4e-21 74.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|73668655|ref|YP_304670.1| - 8.9e-18 64.4 0.0 1.3e-16 60.6 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|73668655|ref|YP_304670.1| - 2.1e-15 56.6 0.0 2.7e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|73668655|ref|YP_304670.1| - 3.7e-13 49.8 0.0 7.5e-13 48.8 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|73668655|ref|YP_304670.1| - 1.4e-12 47.3 0.2 8.5e-10 38.2 0.2 2.9 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.25 gi|73668655|ref|YP_304670.1| - 7.4e-08 32.1 0.1 3.4e-06 26.6 0.1 2.4 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 gi|73668655|ref|YP_304670.1| - 7.1e-06 25.7 0.0 1.6e-05 24.6 0.0 1.6 1 1 0 1 1 1 1 NmrA-like family NAD_binding_7 PF13241.6 gi|73668655|ref|YP_304670.1| - 0.02 15.3 0.0 0.037 14.5 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding TrkA_N PF02254.18 gi|73668655|ref|YP_304670.1| - 0.037 14.3 0.1 0.1 12.8 0.0 1.8 2 0 0 2 2 2 0 TrkA-N domain NAD_binding_2 PF03446.15 gi|73668655|ref|YP_304670.1| - 0.041 14.1 0.0 0.21 11.8 0.0 1.9 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase KR PF08659.10 gi|73668655|ref|YP_304670.1| - 0.043 13.7 0.0 0.22 11.4 0.1 2.1 2 1 0 2 2 2 0 KR domain Polysacc_synt_3 PF13440.6 gi|73668656|ref|YP_304671.1| - 6.9e-23 81.3 16.7 6.9e-23 81.3 16.7 2.2 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|73668656|ref|YP_304671.1| - 1.9e-20 73.4 31.3 1.9e-20 73.4 31.3 2.7 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|73668656|ref|YP_304671.1| - 1.6e-19 70.4 24.9 1.6e-19 70.4 24.9 3.4 3 1 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|73668656|ref|YP_304671.1| - 2.9e-08 32.8 45.6 3.2e-08 32.6 44.7 1.5 1 1 0 1 1 1 1 Lipid II flippase MurJ MatE PF01554.18 gi|73668656|ref|YP_304671.1| - 3.9e-08 33.1 6.9 3.9e-08 33.1 6.9 4.4 3 2 1 4 4 4 2 MatE Disaggr_repeat PF06848.11 gi|73668657|ref|YP_304672.1| - 2.6e-168 555.0 16.2 5.5e-84 280.3 5.0 2.5 2 0 0 2 2 2 2 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|73668657|ref|YP_304672.1| - 1.9e-77 259.4 12.8 1.9e-77 259.4 12.8 3.4 2 1 2 4 4 4 1 Disaggregatase related Beta_helix PF13229.6 gi|73668657|ref|YP_304672.1| - 1.9e-18 66.8 57.2 7.1e-12 45.4 24.6 3.2 2 1 1 3 3 3 2 Right handed beta helix region DUF5123 PF17161.4 gi|73668657|ref|YP_304672.1| - 6.5e-05 24.0 18.4 0.00047 21.2 4.4 4.1 3 1 0 3 3 3 2 Domain of unknown function (DUF5123) Rapsyn_N PF10579.9 gi|73668657|ref|YP_304672.1| - 0.022 14.9 0.0 6.4 7.0 0.0 3.7 5 0 0 5 5 5 0 Rapsyn N-terminal myristoylation and linker region TGFb_propeptide PF00688.18 gi|73668657|ref|YP_304672.1| - 0.042 13.6 0.0 26 4.4 0.0 3.5 4 0 0 4 4 4 0 TGF-beta propeptide B12D PF06522.11 gi|73668657|ref|YP_304672.1| - 2.2 8.2 8.5 9.5 6.1 0.6 2.9 3 0 0 3 3 3 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Disaggr_assoc PF08480.10 gi|73668658|ref|YP_304673.1| - 8.3e-74 247.6 14.7 8.3e-74 247.6 14.7 3.3 2 1 0 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|73668658|ref|YP_304673.1| - 6.6e-15 55.3 45.2 6.3e-12 45.6 26.0 3.3 2 1 1 3 3 3 2 Right handed beta helix region He_PIG PF05345.12 gi|73668658|ref|YP_304673.1| - 4.3e-07 30.0 0.4 0.0014 18.8 0.0 2.6 2 0 0 2 2 2 2 Putative Ig domain Big_9 PF17963.1 gi|73668658|ref|YP_304673.1| - 0.00091 19.9 1.9 0.0016 19.1 0.2 2.2 2 1 0 2 2 2 1 Bacterial Ig domain DUF5123 PF17161.4 gi|73668658|ref|YP_304673.1| - 0.0024 18.9 1.4 0.0024 18.9 1.4 4.9 3 2 1 5 5 5 1 Domain of unknown function (DUF5123) DUF5345 PF17280.2 gi|73668658|ref|YP_304673.1| - 0.034 14.1 0.0 0.056 13.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5345) Disaggr_assoc PF08480.10 gi|73668659|ref|YP_304674.1| - 1.5e-74 250.0 13.7 1.5e-74 250.0 13.7 3.2 2 1 2 4 4 4 1 Disaggregatase related Beta_helix PF13229.6 gi|73668659|ref|YP_304674.1| - 1e-15 57.9 55.3 3.2e-12 46.6 28.5 3.2 2 1 1 3 3 3 2 Right handed beta helix region He_PIG PF05345.12 gi|73668659|ref|YP_304674.1| - 4.1e-07 30.1 0.4 0.0014 18.8 0.0 2.6 2 0 0 2 2 2 2 Putative Ig domain Big_9 PF17963.1 gi|73668659|ref|YP_304674.1| - 0.0011 19.6 2.2 0.0016 19.1 0.2 2.2 2 1 0 2 2 2 1 Bacterial Ig domain DUF5123 PF17161.4 gi|73668659|ref|YP_304674.1| - 0.0028 18.7 1.1 0.0028 18.7 1.1 5.2 3 2 2 5 5 5 1 Domain of unknown function (DUF5123) DUF5345 PF17280.2 gi|73668659|ref|YP_304674.1| - 0.034 14.1 0.0 0.056 13.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5345) Disaggr_assoc PF08480.10 gi|73668660|ref|YP_304675.1| - 3.2e-69 232.6 11.1 3.2e-69 232.6 11.1 3.1 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|73668660|ref|YP_304675.1| - 1.9e-14 53.8 41.2 2.5e-13 50.2 21.2 3.1 2 1 1 3 3 3 2 Right handed beta helix region DUF5123 PF17161.4 gi|73668660|ref|YP_304675.1| - 0.0093 17.0 12.0 0.11 13.5 4.1 3.6 2 1 1 3 3 3 1 Domain of unknown function (DUF5123) Glycos_transf_1 PF00534.20 gi|73668661|ref|YP_304676.1| - 1.5e-31 109.3 0.2 2.2e-30 105.4 0.0 2.8 3 1 1 4 4 4 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73668661|ref|YP_304676.1| - 3.1e-28 98.9 0.0 1.3e-27 96.8 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73668661|ref|YP_304676.1| - 5.2e-15 55.8 0.0 7.8e-15 55.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|73668661|ref|YP_304676.1| - 1.1e-10 41.7 0.0 2.1e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|73668661|ref|YP_304676.1| - 4.6e-08 33.7 0.0 7.2e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|73668662|ref|YP_304677.1| - 4.1e-44 150.1 0.0 7.5e-44 149.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73668662|ref|YP_304677.1| - 1.9e-34 118.9 0.1 5.7e-34 117.4 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73668662|ref|YP_304677.1| - 2.3e-20 73.3 0.0 4.5e-20 72.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|73668662|ref|YP_304677.1| - 2.3e-11 43.9 0.0 4.4e-11 43.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|73668662|ref|YP_304677.1| - 3.3e-10 40.6 0.0 8e-10 39.4 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|73668662|ref|YP_304677.1| - 0.00013 22.0 0.2 0.0019 18.2 0.2 2.4 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.26 gi|73668664|ref|YP_304679.1| - 2.3e-30 105.6 0.0 3.2e-30 105.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|73668664|ref|YP_304679.1| - 3e-17 63.0 0.0 4.6e-17 62.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|73668664|ref|YP_304679.1| - 4.7e-16 59.4 0.0 9.7e-16 58.3 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|73668664|ref|YP_304679.1| - 1.6e-09 38.0 0.0 3.6e-09 36.8 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.6 gi|73668664|ref|YP_304679.1| - 1.2e-05 25.7 0.0 7e-05 23.3 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase family 2 NTP_transf_3 PF12804.7 gi|73668664|ref|YP_304679.1| - 0.0014 19.1 0.0 0.0024 18.2 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain Anp1 PF03452.14 gi|73668664|ref|YP_304679.1| - 0.013 14.9 0.0 0.031 13.7 0.0 1.5 1 1 1 2 2 2 0 Anp1 FA_desaturase PF00487.24 gi|73668664|ref|YP_304679.1| - 0.036 13.9 2.7 0.053 13.3 2.7 1.2 1 0 0 1 1 1 0 Fatty acid desaturase Glyco_transf_21 PF13506.6 gi|73668664|ref|YP_304679.1| - 0.069 12.6 0.0 0.35 10.3 0.0 2.0 1 1 0 1 1 1 0 Glycosyl transferase family 21 Kei1 PF08552.11 gi|73668664|ref|YP_304679.1| - 2.6 7.9 10.0 1 9.2 5.8 2.1 1 1 1 2 2 2 0 Inositolphosphorylceramide synthase subunit Kei1 Glycos_transf_2 PF00535.26 gi|73668665|ref|YP_304680.1| - 2.4e-26 92.6 0.1 3.6e-26 92.0 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73668665|ref|YP_304680.1| - 2.7e-06 27.5 0.0 4.1e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|73668665|ref|YP_304680.1| - 5.6e-06 26.8 0.1 6.7e-05 23.3 0.1 2.1 1 1 1 2 2 2 1 Glycosyl transferase family 2 DUF374 PF04028.13 gi|73668665|ref|YP_304680.1| - 0.12 12.0 0.0 0.38 10.3 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF374) Glyco_tranf_2_2 PF10111.9 gi|73668665|ref|YP_304680.1| - 0.16 11.5 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF373 PF04123.13 gi|73668665|ref|YP_304680.1| - 1.5 8.2 8.7 0.71 9.3 2.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF373) DUF1616 PF07760.11 gi|73668666|ref|YP_304681.1| - 3.4e-86 289.3 1.2 3.9e-86 289.0 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) 7tm_3 PF00003.22 gi|73668666|ref|YP_304681.1| - 0.014 15.1 1.7 0.024 14.4 1.1 1.6 2 0 0 2 2 2 0 7 transmembrane sweet-taste receptor of 3 GCPR DUF872 PF05915.12 gi|73668666|ref|YP_304681.1| - 0.38 10.9 3.6 13 6.0 1.2 2.4 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) CPBP PF02517.16 gi|73668667|ref|YP_304682.1| - 6.1e-15 55.4 13.8 1.2e-13 51.2 9.9 2.6 1 1 1 2 2 2 2 CPBP intramembrane metalloprotease Hexapep PF00132.24 gi|73668669|ref|YP_304684.1| - 8.1e-31 104.6 24.0 1.7e-08 33.9 4.0 5.2 5 0 0 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73668669|ref|YP_304684.1| - 3.3e-11 42.7 24.2 1.9e-05 24.3 6.2 5.1 5 0 0 5 5 5 3 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.13 gi|73668669|ref|YP_304684.1| - 0.013 15.7 5.5 0.03 14.6 1.7 2.9 3 0 0 3 3 3 0 Polymer-forming cytoskeletal DegT_DnrJ_EryC1 PF01041.17 gi|73668670|ref|YP_304685.1| - 3.6e-134 447.6 0.1 4.1e-134 447.5 0.1 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|73668670|ref|YP_304685.1| - 1.1e-08 34.8 0.1 4.9e-08 32.6 0.1 1.9 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|73668670|ref|YP_304685.1| - 5.3e-07 28.5 0.0 1.1e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|73668670|ref|YP_304685.1| - 0.00015 20.8 0.0 0.00085 18.4 0.0 1.9 2 0 0 2 2 2 1 Aminotransferase class-V GFO_IDH_MocA PF01408.22 gi|73668671|ref|YP_304686.1| - 7.1e-31 107.5 1.0 1.3e-30 106.7 1.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|73668671|ref|YP_304686.1| - 2.2e-05 24.4 0.1 7.8e-05 22.7 0.0 2.0 2 0 0 2 2 2 1 Oxidoreductase family, C-terminal alpha/beta domain Semialdhyde_dh PF01118.24 gi|73668671|ref|YP_304686.1| - 0.00018 22.0 0.6 0.00038 20.9 0.5 1.6 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain OCD_Mu_crystall PF02423.15 gi|73668671|ref|YP_304686.1| - 0.00023 20.2 1.4 0.00037 19.5 1.4 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family F420_oxidored PF03807.17 gi|73668671|ref|YP_304686.1| - 0.00027 21.5 0.3 0.00056 20.4 0.3 1.6 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|73668671|ref|YP_304686.1| - 0.00049 20.3 1.4 0.00089 19.5 1.4 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase CoA_binding PF02629.19 gi|73668671|ref|YP_304686.1| - 0.0013 19.3 1.2 0.0036 17.9 1.2 1.7 1 0 0 1 1 1 1 CoA binding domain NAD_binding_3 PF03447.16 gi|73668671|ref|YP_304686.1| - 0.0014 19.3 1.4 0.0026 18.4 1.4 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|73668671|ref|YP_304686.1| - 0.0046 17.1 1.7 0.014 15.5 1.7 2.0 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 2-Hacid_dh_C PF02826.19 gi|73668671|ref|YP_304686.1| - 0.0077 15.6 0.1 0.019 14.3 0.1 1.6 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|73668671|ref|YP_304686.1| - 0.024 14.7 1.2 0.2 11.7 0.2 2.5 2 1 1 3 3 3 0 Shikimate / quinate 5-dehydrogenase Gp_dh_N PF00044.24 gi|73668671|ref|YP_304686.1| - 0.025 14.9 0.1 0.078 13.3 0.1 1.9 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|73668671|ref|YP_304686.1| - 0.035 14.4 1.0 0.082 13.2 0.5 1.9 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain VitD-bind_III PF09164.10 gi|73668671|ref|YP_304686.1| - 0.14 12.2 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Vitamin D binding protein, domain III UDPG_MGDP_dh_N PF03721.14 gi|73668672|ref|YP_304687.1| - 2.9e-37 128.1 0.0 5.1e-37 127.3 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|73668672|ref|YP_304687.1| - 5.9e-21 74.5 0.1 4e-20 71.8 0.0 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|73668672|ref|YP_304687.1| - 8.4e-19 67.9 0.1 2.1e-18 66.6 0.0 1.7 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Polysacc_deac_1 PF01522.21 gi|73668673|ref|YP_304688.1| - 0.0037 17.2 0.0 0.012 15.5 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|73668673|ref|YP_304688.1| - 0.046 13.4 0.1 0.36 10.5 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2334) Polysacc_synt_3 PF13440.6 gi|73668674|ref|YP_304689.1| - 2.1e-24 86.3 9.7 2.1e-24 86.3 9.7 1.7 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|73668674|ref|YP_304689.1| - 4.3e-12 46.0 12.5 4.3e-12 46.0 12.5 3.0 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Glycos_transf_2 PF00535.26 gi|73668675|ref|YP_304690.1| - 1.6e-19 70.4 0.3 2.2e-19 69.9 0.3 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|73668675|ref|YP_304690.1| - 0.0015 19.0 0.0 0.003 18.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73668675|ref|YP_304690.1| - 0.0032 17.4 0.1 0.0041 17.0 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 ADH_zinc_N PF00107.26 gi|73668675|ref|YP_304690.1| - 0.015 15.2 0.6 0.042 13.8 0.6 1.7 1 1 0 1 1 1 0 Zinc-binding dehydrogenase Man-6-P_recep PF02157.15 gi|73668675|ref|YP_304690.1| - 0.15 11.1 2.5 0.21 10.7 0.7 1.9 2 0 0 2 2 2 0 Mannose-6-phosphate receptor DUF1616 PF07760.11 gi|73668676|ref|YP_304691.1| - 3.6e-109 364.7 1.1 4.2e-109 364.5 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Sigma_reg_N PF13800.6 gi|73668676|ref|YP_304691.1| - 0.39 11.0 1.5 0.9 9.9 0.3 2.2 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Fumarate_red_C PF02300.17 gi|73668676|ref|YP_304691.1| - 0.82 9.8 3.4 0.74 9.9 0.1 2.3 2 1 0 2 2 2 0 Fumarate reductase subunit C Epimerase PF01370.21 gi|73668677|ref|YP_304692.1| - 5.6e-65 219.2 0.0 1e-64 218.3 0.0 1.4 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|73668677|ref|YP_304692.1| - 3.4e-57 194.3 0.0 7.7e-57 193.2 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|73668677|ref|YP_304692.1| - 5.9e-29 100.9 0.0 1e-28 100.1 0.0 1.4 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|73668677|ref|YP_304692.1| - 4.5e-23 81.8 0.0 4.6e-22 78.5 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|73668677|ref|YP_304692.1| - 1.5e-12 47.3 0.0 1.9e-12 46.9 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|73668677|ref|YP_304692.1| - 3.9e-12 46.4 0.0 8.3e-12 45.4 0.0 1.7 1 1 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|73668677|ref|YP_304692.1| - 1.9e-09 37.1 0.6 4.7e-07 29.2 0.0 2.9 2 1 0 3 3 3 1 Male sterility protein NmrA PF05368.13 gi|73668677|ref|YP_304692.1| - 1.2e-08 34.8 0.1 6.1e-08 32.5 0.0 2.0 2 0 0 2 2 2 1 NmrA-like family adh_short PF00106.25 gi|73668677|ref|YP_304692.1| - 3.5e-05 23.4 0.2 0.00034 20.1 0.0 2.5 2 1 0 2 2 2 1 short chain dehydrogenase 3HCDH_N PF02737.18 gi|73668677|ref|YP_304692.1| - 0.0021 18.0 0.0 0.004 17.1 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KR PF08659.10 gi|73668677|ref|YP_304692.1| - 0.0089 15.9 3.2 0.27 11.1 0.8 3.0 2 1 0 2 2 2 1 KR domain Pyr_redox PF00070.27 gi|73668677|ref|YP_304692.1| - 0.022 15.3 0.2 0.22 12.1 0.0 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase adh_short_C2 PF13561.6 gi|73668677|ref|YP_304692.1| - 0.089 12.3 0.3 0.6 9.6 0.0 2.3 2 1 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase DUF1616 PF07760.11 gi|73668678|ref|YP_304693.1| - 2.7e-94 315.8 0.0 3.2e-94 315.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) CPBP PF02517.16 gi|73668679|ref|YP_304694.1| - 5.8e-19 68.3 8.6 5.8e-19 68.3 8.6 2.2 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease DUF2834 PF11196.8 gi|73668679|ref|YP_304694.1| - 0.05 13.9 0.0 0.05 13.9 0.0 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF2834) ThrE PF06738.12 gi|73668679|ref|YP_304694.1| - 0.068 12.5 9.0 1.6 8.0 0.1 3.0 2 1 1 3 3 3 0 Putative threonine/serine exporter DUF1624 PF07786.12 gi|73668680|ref|YP_304695.1| - 4.5e-76 255.3 9.9 5.1e-76 255.1 9.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.22 gi|73668680|ref|YP_304695.1| - 3.1e-08 33.1 24.9 1.2e-07 31.2 6.0 2.5 1 1 1 2 2 2 2 Acyltransferase family OpgC_C PF10129.9 gi|73668680|ref|YP_304695.1| - 0.00017 20.6 12.3 0.00018 20.5 6.2 2.9 1 1 2 3 3 3 2 OpgC protein Ribosomal_S17e PF00833.18 gi|73668682|ref|YP_304697.1| - 2.7e-14 53.2 2.5 3e-14 53.0 2.5 1.0 1 0 0 1 1 1 1 Ribosomal S17 Longin PF13774.6 gi|73668682|ref|YP_304697.1| - 0.06 13.4 0.1 0.073 13.1 0.1 1.2 1 0 0 1 1 1 0 Regulated-SNARE-like domain DHDPS PF00701.22 gi|73668683|ref|YP_304698.1| - 9.5e-98 326.5 0.1 1.1e-97 326.3 0.1 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family ThiG PF05690.14 gi|73668683|ref|YP_304698.1| - 0.01 15.2 0.0 0.017 14.4 0.0 1.3 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG DapB_C PF05173.14 gi|73668684|ref|YP_304699.1| - 1.1e-46 157.8 0.1 1.5e-46 157.3 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 gi|73668684|ref|YP_304699.1| - 4.5e-34 117.2 1.0 7.1e-34 116.6 1.0 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 3Beta_HSD PF01073.19 gi|73668684|ref|YP_304699.1| - 0.0023 17.0 0.3 0.0027 16.7 0.3 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Semialdhyde_dh PF01118.24 gi|73668684|ref|YP_304699.1| - 0.0065 16.9 0.4 0.014 15.9 0.3 1.6 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain CoA_binding PF02629.19 gi|73668684|ref|YP_304699.1| - 0.0089 16.7 2.1 0.014 16.1 1.0 1.9 2 0 0 2 2 2 1 CoA binding domain HTH_1 PF00126.27 gi|73668686|ref|YP_304701.1| - 0.0064 16.4 0.2 0.012 15.6 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Tnp_4 PF13613.6 gi|73668686|ref|YP_304701.1| - 0.0065 16.2 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix of DDE superfamily endonuclease HTH_29 PF13551.6 gi|73668686|ref|YP_304701.1| - 0.02 14.9 0.1 0.029 14.4 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn helix MarR_2 PF12802.7 gi|73668686|ref|YP_304701.1| - 0.021 14.7 0.0 0.036 14.0 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_23 PF13384.6 gi|73668686|ref|YP_304701.1| - 0.024 14.4 0.0 0.051 13.4 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain LacI PF00356.21 gi|73668686|ref|YP_304701.1| - 0.024 14.4 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family HTH_11 PF08279.12 gi|73668686|ref|YP_304701.1| - 0.037 14.0 0.0 0.07 13.1 0.0 1.6 1 1 0 1 1 1 0 HTH domain HTH_Crp_2 PF13545.6 gi|73668686|ref|YP_304701.1| - 0.054 13.5 0.1 0.11 12.5 0.1 1.6 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain NADH-G_4Fe-4S_3 PF10588.9 gi|73668686|ref|YP_304701.1| - 0.063 12.8 0.0 0.24 11.0 0.1 1.9 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HTH_38 PF13936.6 gi|73668686|ref|YP_304701.1| - 0.069 12.9 0.0 0.5 10.2 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|73668686|ref|YP_304701.1| - 0.071 12.7 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_7 PF02796.15 gi|73668686|ref|YP_304701.1| - 0.099 12.7 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF1673 PF07895.11 gi|73668687|ref|YP_304702.1| - 7.2e-48 163.3 5.5 5.2e-45 154.0 5.5 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) ETRAMP PF09716.10 gi|73668687|ref|YP_304702.1| - 0.026 14.6 0.0 2.6 8.2 0.0 2.5 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Kei1 PF08552.11 gi|73668687|ref|YP_304702.1| - 0.12 12.3 2.1 0.13 12.1 0.7 1.8 2 1 0 2 2 2 0 Inositolphosphorylceramide synthase subunit Kei1 DUF1673 PF07895.11 gi|73668688|ref|YP_304703.1| - 1.1e-52 179.0 9.4 1.3e-52 178.8 9.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) DUF2061 PF09834.9 gi|73668688|ref|YP_304703.1| - 5.9 7.5 9.6 0.32 11.5 2.7 2.3 2 0 0 2 2 2 0 Predicted membrane protein (DUF2061) DUF1673 PF07895.11 gi|73668689|ref|YP_304704.1| - 1.1e-38 133.2 7.8 2.5e-38 132.1 7.8 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) PufQ PF05398.11 gi|73668689|ref|YP_304704.1| - 0.012 15.7 0.1 0.027 14.6 0.1 1.5 1 0 0 1 1 1 0 PufQ cytochrome subunit DUF4131 PF13567.6 gi|73668689|ref|YP_304704.1| - 0.27 10.8 5.1 0.23 11.1 1.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DUF1673 PF07895.11 gi|73668690|ref|YP_304705.1| - 4.9e-32 111.5 7.2 5.4e-31 108.1 7.2 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) DUF4131 PF13567.6 gi|73668690|ref|YP_304705.1| - 0.016 14.9 1.7 0.016 14.9 1.7 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) CCDC-167 PF15188.6 gi|73668690|ref|YP_304705.1| - 0.094 13.1 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 BPD_transp_1 PF00528.22 gi|73668690|ref|YP_304705.1| - 2.3 7.9 11.5 0.33 10.6 7.2 1.7 2 0 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component DUF1673 PF07895.11 gi|73668691|ref|YP_304706.1| - 1.9e-51 175.0 8.9 3.6e-50 170.8 8.9 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) SecD_SecF PF02355.16 gi|73668691|ref|YP_304706.1| - 0.00062 19.2 2.5 0.00081 18.8 2.5 1.1 1 0 0 1 1 1 1 Protein export membrane protein TctB PF07331.11 gi|73668691|ref|YP_304706.1| - 0.95 9.7 7.3 6.7 7.0 7.3 2.0 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Vma12 PF11712.8 gi|73668691|ref|YP_304706.1| - 1.2 9.2 5.4 0.36 10.9 2.3 1.6 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF1980 PF09323.10 gi|73668691|ref|YP_304706.1| - 2.1 8.3 9.0 0.91 9.4 4.2 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF1980) DUF1673 PF07895.11 gi|73668692|ref|YP_304707.1| - 6.8e-37 127.4 5.1 1.3e-36 126.5 5.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) DUF2418 PF10332.9 gi|73668692|ref|YP_304707.1| - 0.063 13.8 8.5 2.2 8.9 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2418) DUF1673 PF07895.11 gi|73668693|ref|YP_304708.1| - 2.6e-36 125.5 7.8 2.3e-35 122.4 7.8 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) DUF4131 PF13567.6 gi|73668693|ref|YP_304708.1| - 0.0004 20.1 2.2 0.0004 20.1 2.2 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4131) E1-E2_ATPase PF00122.20 gi|73668693|ref|YP_304708.1| - 0.68 9.4 4.1 0.25 10.8 1.2 1.7 2 0 0 2 2 2 0 E1-E2 ATPase DUF2116 PF09889.9 gi|73668693|ref|YP_304708.1| - 1.7 8.7 6.1 14 5.8 3.5 2.3 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2070 PF09843.9 gi|73668693|ref|YP_304708.1| - 4.1 5.6 6.9 5.3 5.2 6.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF805 PF05656.14 gi|73668693|ref|YP_304708.1| - 7.4 7.0 10.5 13 6.2 10.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF805) DUF1673 PF07895.11 gi|73668694|ref|YP_304709.1| - 1.5e-42 145.9 5.9 5.6e-42 144.0 5.9 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) DUF5439 PF17507.2 gi|73668694|ref|YP_304709.1| - 0.048 13.9 2.3 0.048 13.9 2.3 2.0 1 1 0 2 2 2 0 Family of unknown function (DUF5439) PAP2 PF01569.21 gi|73668694|ref|YP_304709.1| - 0.096 12.5 2.3 0.16 11.7 1.7 1.6 1 1 0 1 1 1 0 PAP2 superfamily DUF4396 PF14342.6 gi|73668694|ref|YP_304709.1| - 0.74 10.2 3.8 0.34 11.3 0.8 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4396) Vma12 PF11712.8 gi|73668694|ref|YP_304709.1| - 5.7 7.0 6.1 1.8 8.6 2.0 2.0 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF1673 PF07895.11 gi|73668695|ref|YP_304710.1| - 8.5e-50 169.6 4.1 1.5e-48 165.5 4.1 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) DUF872 PF05915.12 gi|73668695|ref|YP_304710.1| - 0.19 11.9 4.0 0.25 11.5 3.1 1.6 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) CPP1-like PF11833.8 gi|73668695|ref|YP_304710.1| - 0.21 11.2 0.4 0.31 10.7 0.4 1.2 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF1673 PF07895.11 gi|73668696|ref|YP_304711.1| - 2.5e-49 168.0 8.1 8.6e-49 166.3 8.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) DUF1673 PF07895.11 gi|73668697|ref|YP_304712.1| - 3.3e-06 27.0 9.6 1.6e-05 24.7 9.6 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) Syndecan PF01034.20 gi|73668697|ref|YP_304712.1| - 0.23 11.4 1.8 0.66 9.9 0.7 2.4 1 1 0 1 1 1 0 Syndecan domain Glucos_trans_II PF14264.6 gi|73668697|ref|YP_304712.1| - 2.9 7.2 12.9 7.1 5.9 12.9 1.6 1 1 0 1 1 1 0 Glucosyl transferase GtrII DUF2892 PF11127.8 gi|73668697|ref|YP_304712.1| - 4.9 7.3 6.0 24 5.1 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) DUF1673 PF07895.11 gi|73668698|ref|YP_304713.1| - 2.1e-16 60.3 5.3 2.7e-16 60.0 5.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) SRP54_N PF02881.19 gi|73668699|ref|YP_304714.1| - 0.41 10.9 5.7 9.2 6.6 3.2 3.2 1 1 1 2 2 2 0 SRP54-type protein, helical bundle domain PyrI PF01948.18 gi|73668700|ref|YP_304715.1| - 3.2e-30 104.2 2.8 4.7e-30 103.7 2.8 1.3 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|73668700|ref|YP_304715.1| - 2.2e-16 59.5 6.5 3.1e-16 59.0 4.0 2.1 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.21 gi|73668701|ref|YP_304716.1| - 3.5e-50 169.9 0.0 8.6e-50 168.6 0.0 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|73668701|ref|YP_304716.1| - 8.2e-32 110.5 0.0 1.1e-31 110.0 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BRCT PF00533.26 gi|73668701|ref|YP_304716.1| - 0.12 12.7 0.0 0.32 11.4 0.0 1.7 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain RraA-like PF03737.15 gi|73668703|ref|YP_304718.1| - 1.7e-42 145.1 1.5 1.7e-42 145.1 1.5 2.4 2 1 0 2 2 2 1 Aldolase/RraA OMPdecase PF00215.24 gi|73668703|ref|YP_304718.1| - 2.1e-15 56.9 5.9 9e-15 54.9 5.9 2.2 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family HMGL-like PF00682.19 gi|73668703|ref|YP_304718.1| - 5.1e-05 23.0 3.2 0.065 12.8 0.1 2.9 1 1 2 3 3 3 2 HMGL-like His_biosynth PF00977.21 gi|73668703|ref|YP_304718.1| - 9.5e-05 22.0 3.3 0.002 17.6 1.7 2.6 1 1 1 2 2 2 1 Histidine biosynthesis protein NanE PF04131.14 gi|73668703|ref|YP_304718.1| - 0.00011 21.4 1.2 0.00011 21.4 1.2 2.0 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase ADH_zinc_N PF00107.26 gi|73668703|ref|YP_304718.1| - 0.00047 20.1 2.0 0.098 12.6 2.0 2.5 1 1 0 1 1 1 1 Zinc-binding dehydrogenase Ribul_P_3_epim PF00834.19 gi|73668703|ref|YP_304718.1| - 0.015 14.6 2.8 0.12 11.7 0.5 2.4 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family TPP_enzyme_M PF00205.22 gi|73668703|ref|YP_304718.1| - 0.023 14.4 2.1 9.9 5.9 0.1 3.5 2 2 1 3 3 3 0 Thiamine pyrophosphate enzyme, central domain ThiG PF05690.14 gi|73668703|ref|YP_304718.1| - 0.044 13.1 2.5 0.081 12.2 2.5 1.5 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG Trp_syntA PF00290.20 gi|73668703|ref|YP_304718.1| - 0.054 12.3 5.1 0.95 8.2 2.4 2.6 2 1 0 2 2 2 0 Tryptophan synthase alpha chain DUF4410 PF14366.6 gi|73668703|ref|YP_304718.1| - 0.13 12.1 1.4 0.29 11.1 0.1 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4410) RQC PF09382.10 gi|73668704|ref|YP_304719.1| - 2.1e-33 114.5 0.0 5.5e-33 113.2 0.0 1.7 1 0 0 1 1 1 1 RQC domain Helicase_C PF00271.31 gi|73668704|ref|YP_304719.1| - 2e-21 76.4 0.0 2.1e-18 66.7 0.0 3.6 4 0 0 4 4 4 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|73668704|ref|YP_304719.1| - 1.9e-20 73.3 0.0 5.1e-20 72.0 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase HRDC PF00570.23 gi|73668704|ref|YP_304719.1| - 1.4e-19 69.9 0.0 3.5e-19 68.5 0.0 1.7 1 0 0 1 1 1 1 HRDC domain RecQ_Zn_bind PF16124.5 gi|73668704|ref|YP_304719.1| - 1.1e-16 61.3 5.1 3.2e-16 59.8 5.1 1.9 1 0 0 1 1 1 1 RecQ zinc-binding Helicase_Sgs1 PF11408.8 gi|73668704|ref|YP_304719.1| - 1.5e-06 28.2 0.0 4.4e-06 26.6 0.0 1.8 1 0 0 1 1 1 1 Sgs1 RecQ helicase HTH_40 PF14493.6 gi|73668704|ref|YP_304719.1| - 2.8e-06 27.7 0.0 1.3e-05 25.5 0.0 2.3 1 0 0 1 1 1 1 Helix-turn-helix domain ResIII PF04851.15 gi|73668704|ref|YP_304719.1| - 0.025 14.6 0.0 0.098 12.7 0.0 2.1 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit ABC_tran PF00005.27 gi|73668705|ref|YP_304720.1| - 3.3e-32 111.9 0.0 4.3e-32 111.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668705|ref|YP_304720.1| - 2.8e-14 53.7 0.1 6.6e-09 36.0 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668705|ref|YP_304720.1| - 1.2e-10 41.3 0.0 7e-10 38.7 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|73668705|ref|YP_304720.1| - 0.00021 21.9 0.1 0.00045 20.8 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|73668705|ref|YP_304720.1| - 0.0046 17.4 0.0 0.01 16.3 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|73668705|ref|YP_304720.1| - 0.037 13.8 0.0 0.057 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|73668705|ref|YP_304720.1| - 0.041 13.6 0.2 0.092 12.5 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_ATPase PF09818.9 gi|73668705|ref|YP_304720.1| - 0.097 11.4 0.1 0.47 9.2 0.0 1.8 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_16 PF13191.6 gi|73668705|ref|YP_304720.1| - 0.1 13.0 0.0 0.17 12.2 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 gi|73668705|ref|YP_304720.1| - 0.16 11.6 0.1 1.4 8.4 0.1 2.2 2 0 0 2 2 2 0 AAA domain RecA PF00154.21 gi|73668705|ref|YP_304720.1| - 0.17 11.3 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 recA bacterial DNA recombination protein AAA_15 PF13175.6 gi|73668705|ref|YP_304720.1| - 0.18 11.5 0.5 7.5 6.2 0.3 2.1 1 1 0 2 2 2 0 AAA ATPase domain FecCD PF01032.18 gi|73668706|ref|YP_304721.1| - 4.5e-92 308.4 30.7 5.7e-92 308.1 30.7 1.1 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|73668706|ref|YP_304721.1| - 1.4e-05 24.8 19.4 1.4e-05 24.8 19.4 1.9 2 1 0 2 2 2 1 ABC 3 transport family LapA_dom PF06305.11 gi|73668706|ref|YP_304721.1| - 0.16 11.8 0.3 0.16 11.8 0.3 5.4 4 1 2 6 6 6 0 Lipopolysaccharide assembly protein A domain Peripla_BP_2 PF01497.18 gi|73668707|ref|YP_304722.1| - 6.7e-20 71.7 0.0 1e-19 71.0 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein MCR_C PF04609.12 gi|73668707|ref|YP_304722.1| - 0.019 14.1 0.1 0.031 13.4 0.1 1.2 1 0 0 1 1 1 0 Methyl-coenzyme M reductase operon protein C Phi-29_GP16_7 PF06720.11 gi|73668707|ref|YP_304722.1| - 0.087 12.7 0.4 0.25 11.2 0.1 1.9 2 0 0 2 2 2 0 Bacteriophage phi-29 early protein GP16.7 DsbD PF02683.15 gi|73668708|ref|YP_304723.1| - 4.4e-11 43.1 16.9 7.7e-11 42.3 16.9 1.4 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Thioredoxin_3 PF13192.6 gi|73668708|ref|YP_304723.1| - 0.0087 16.1 0.0 0.018 15.1 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin domain CARDB PF07705.11 gi|73668708|ref|YP_304723.1| - 0.15 12.4 0.7 0.25 11.6 0.2 1.6 2 0 0 2 2 2 0 CARDB Peripla_BP_2 PF01497.18 gi|73668709|ref|YP_304724.1| - 1.1e-18 67.7 0.0 2.3e-18 66.7 0.0 1.5 1 1 0 1 1 1 1 Periplasmic binding protein AP_endonuc_2 PF01261.24 gi|73668709|ref|YP_304724.1| - 0.12 11.8 0.0 0.24 10.8 0.0 1.5 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel DUF5608 PF18356.1 gi|73668709|ref|YP_304724.1| - 0.16 12.0 0.1 0.39 10.7 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5608) Methyltransf_25 PF13649.6 gi|73668710|ref|YP_304725.1| - 8.7e-13 48.8 0.0 1.7e-12 47.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|73668710|ref|YP_304725.1| - 9.3e-09 34.7 0.0 1.9e-08 33.7 0.0 1.5 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|73668710|ref|YP_304725.1| - 4e-08 33.8 0.0 8.3e-08 32.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668710|ref|YP_304725.1| - 1.9e-07 31.0 0.0 3.6e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668710|ref|YP_304725.1| - 2.4e-07 31.4 0.0 4.6e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|73668710|ref|YP_304725.1| - 4.4e-07 29.9 0.0 6.4e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GidB PF02527.15 gi|73668710|ref|YP_304725.1| - 7.8e-07 28.6 0.0 1.2e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G MTS PF05175.14 gi|73668710|ref|YP_304725.1| - 9.2e-07 28.6 0.0 1.6e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|73668710|ref|YP_304725.1| - 2.1e-05 24.0 0.1 3.2e-05 23.4 0.1 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|73668710|ref|YP_304725.1| - 3.3e-05 23.8 0.0 5e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|73668710|ref|YP_304725.1| - 6.4e-05 22.6 0.0 0.00018 21.1 0.0 1.7 1 1 1 2 2 2 1 RNA cap guanine-N2 methyltransferase DREV PF05219.12 gi|73668710|ref|YP_304725.1| - 0.00041 19.5 0.0 0.00059 19.0 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase Methyltr_RsmB-F PF01189.17 gi|73668710|ref|YP_304725.1| - 0.00077 19.2 0.0 0.0011 18.6 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_18 PF12847.7 gi|73668710|ref|YP_304725.1| - 0.0039 17.1 0.0 0.0089 16.0 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|73668710|ref|YP_304725.1| - 0.0044 16.8 0.1 0.0077 16.0 0.1 1.5 1 0 0 1 1 1 1 Lysine methyltransferase TehB PF03848.14 gi|73668710|ref|YP_304725.1| - 0.011 15.2 0.0 0.019 14.4 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB PrmA PF06325.13 gi|73668710|ref|YP_304725.1| - 0.013 14.9 0.0 0.025 14.0 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) NodS PF05401.11 gi|73668710|ref|YP_304725.1| - 0.015 15.0 0.0 0.031 13.9 0.0 1.4 1 1 0 1 1 1 0 Nodulation protein S (NodS) CMAS PF02353.20 gi|73668710|ref|YP_304725.1| - 0.022 14.1 0.0 0.041 13.2 0.0 1.4 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Cons_hypoth95 PF03602.15 gi|73668710|ref|YP_304725.1| - 0.025 14.2 0.0 0.043 13.5 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 tRNA_U5-meth_tr PF05958.11 gi|73668710|ref|YP_304725.1| - 0.09 11.7 0.0 0.21 10.6 0.0 1.5 1 1 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase DUF938 PF06080.12 gi|73668710|ref|YP_304725.1| - 0.11 12.3 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) GMP_synt_C PF00958.22 gi|73668711|ref|YP_304726.1| - 3.3e-30 104.0 0.0 6.6e-30 103.0 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|73668711|ref|YP_304726.1| - 1.8e-08 33.8 0.0 0.00065 18.9 0.0 2.2 2 0 0 2 2 2 2 NAD synthase QueC PF06508.13 gi|73668711|ref|YP_304726.1| - 0.00074 19.1 0.0 0.0017 17.9 0.0 1.6 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|73668711|ref|YP_304726.1| - 0.0009 18.1 0.0 0.029 13.2 0.0 2.2 2 0 0 2 2 2 1 tRNA methyl transferase PAPS_reduct PF01507.19 gi|73668711|ref|YP_304726.1| - 0.014 15.5 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.21 gi|73668711|ref|YP_304726.1| - 0.034 13.8 0.0 0.06 13.0 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase ATP_bind_3 PF01171.20 gi|73668711|ref|YP_304726.1| - 0.18 11.5 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 PP-loop family Radical_SAM PF04055.21 gi|73668712|ref|YP_304727.1| - 0.017 15.5 0.1 0.045 14.1 0.1 1.7 1 1 0 1 1 1 0 Radical SAM superfamily Radical_SAM_C PF16199.5 gi|73668712|ref|YP_304727.1| - 0.065 13.3 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Radical_SAM C-terminal domain Acetyltransf_1 PF00583.25 gi|73668713|ref|YP_304728.1| - 6.3e-18 65.1 0.0 7.5e-18 64.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73668713|ref|YP_304728.1| - 7.6e-15 55.1 0.0 1.1e-14 54.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|73668713|ref|YP_304728.1| - 4e-14 53.0 0.0 4.7e-14 52.8 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73668713|ref|YP_304728.1| - 4.4e-14 52.5 0.0 5.7e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|73668713|ref|YP_304728.1| - 6.4e-14 52.8 0.0 7.6e-14 52.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73668713|ref|YP_304728.1| - 0.00039 20.5 0.1 0.0014 18.7 0.1 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73668713|ref|YP_304728.1| - 0.00067 19.7 0.0 0.0012 19.0 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 gi|73668713|ref|YP_304728.1| - 0.00092 19.1 0.1 0.0023 17.8 0.1 1.7 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.6 gi|73668713|ref|YP_304728.1| - 0.0023 17.6 0.0 0.0052 16.5 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain AstA PF04958.12 gi|73668713|ref|YP_304728.1| - 0.02 13.4 0.1 0.057 12.0 0.1 1.6 1 1 0 1 1 1 0 Arginine N-succinyltransferase beta subunit DUF3823 PF12866.7 gi|73668713|ref|YP_304728.1| - 0.1 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3823) N-terminal domain AA_kinase PF00696.28 gi|73668714|ref|YP_304729.1| - 5.6e-43 147.3 6.9 6.5e-43 147.1 6.9 1.0 1 0 0 1 1 1 1 Amino acid kinase family MC1 PF05854.11 gi|73668715|ref|YP_304730.1| - 2.6e-40 136.6 1.4 3.1e-40 136.4 1.4 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 GCHY-1 PF02649.14 gi|73668716|ref|YP_304731.1| - 4.1e-84 282.1 2.5 4.7e-84 281.9 2.5 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 FolB PF02152.18 gi|73668716|ref|YP_304731.1| - 0.0034 17.9 0.2 0.41 11.2 0.0 2.7 2 0 0 2 2 2 2 Dihydroneopterin aldolase DUF2098 PF09871.9 gi|73668717|ref|YP_304732.1| - 8.4e-24 83.7 1.6 9.5e-24 83.6 1.6 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) HAS-barrel PF09378.10 gi|73668717|ref|YP_304732.1| - 0.1 12.7 1.0 0.24 11.6 1.0 1.7 1 1 0 1 1 1 0 HAS barrel domain DUF2114 PF09887.9 gi|73668718|ref|YP_304733.1| - 2.9e-232 771.0 7.0 3.3e-232 770.8 7.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) Glyoxalase_2 PF12681.7 gi|73668719|ref|YP_304734.1| - 2.8e-54 182.1 1.7 3.5e-54 181.8 1.7 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|73668719|ref|YP_304734.1| - 2.4e-06 27.8 0.0 0.019 15.2 0.0 2.6 3 0 0 3 3 3 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DUF2172 PF09940.9 gi|73668719|ref|YP_304734.1| - 0.036 14.5 0.1 2.8 8.4 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF2172) GATase_3 PF07685.14 gi|73668720|ref|YP_304735.1| - 2.8e-32 111.9 0.0 4.1e-32 111.4 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|73668720|ref|YP_304735.1| - 1.4e-23 83.8 0.8 3.3e-15 56.5 0.1 2.4 2 0 0 2 2 2 2 AAA domain CbiA PF01656.23 gi|73668720|ref|YP_304735.1| - 1.9e-19 70.0 0.0 3.2e-19 69.3 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MobB PF03205.14 gi|73668720|ref|YP_304735.1| - 0.089 12.7 0.1 1.8 8.5 0.0 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF1611 PF07755.11 gi|73668720|ref|YP_304735.1| - 0.11 11.8 1.1 0.48 9.7 1.0 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain NTPase_1 PF03266.15 gi|73668720|ref|YP_304735.1| - 0.17 11.8 0.1 1.1 9.2 0.1 2.2 2 1 0 2 2 2 0 NTPase PRK PF00485.18 gi|73668720|ref|YP_304735.1| - 0.18 11.5 0.3 10 5.8 0.0 2.5 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_31 PF13614.6 gi|73668720|ref|YP_304735.1| - 0.23 11.4 0.5 0.49 10.3 0.5 1.5 1 0 0 1 1 1 0 AAA domain Pentapeptide PF00805.22 gi|73668721|ref|YP_304736.1| - 0.0059 16.2 8.9 0.0059 16.2 8.9 3.0 2 1 0 2 2 2 2 Pentapeptide repeats (8 copies) Y1_Tnp PF01797.16 gi|73668722|ref|YP_304737.1| - 2.2e-34 118.2 2.1 3e-34 117.7 2.1 1.2 1 0 0 1 1 1 1 Transposase IS200 like Peptidase_M44 PF03410.13 gi|73668722|ref|YP_304737.1| - 0.016 13.8 0.0 0.019 13.6 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox Radical_SAM PF04055.21 gi|73668723|ref|YP_304738.1| - 8.3e-30 104.3 1.4 1.8e-28 100.0 0.2 2.2 2 0 0 2 2 2 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|73668723|ref|YP_304738.1| - 7.9e-20 71.1 0.2 1.3e-19 70.4 0.2 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|73668723|ref|YP_304738.1| - 1e-08 35.6 0.3 2.6e-08 34.2 0.2 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73668723|ref|YP_304738.1| - 6.8e-05 23.0 0.6 0.00014 21.9 0.6 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain SurE PF01975.17 gi|73668725|ref|YP_304740.1| - 1.5e-51 174.9 0.0 1.8e-51 174.7 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE MEDS PF14417.6 gi|73668726|ref|YP_304741.1| - 0.004 17.0 0.0 0.0044 16.9 0.0 1.1 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain DUF4919 PF16266.5 gi|73668726|ref|YP_304741.1| - 0.025 14.5 0.2 0.028 14.3 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4919) PP_kinase_C_1 PF17941.1 gi|73668727|ref|YP_304742.1| - 1.3e-73 246.0 0.0 2.4e-73 245.2 0.0 1.4 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain 1 PP_kinase PF02503.17 gi|73668727|ref|YP_304742.1| - 2.2e-63 213.5 0.0 6e-63 212.1 0.0 1.8 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PP_kinase_C PF13090.6 gi|73668727|ref|YP_304742.1| - 1.1e-61 207.2 0.0 2.5e-61 206.1 0.0 1.6 2 0 0 2 2 2 1 Polyphosphate kinase C-terminal domain 2 PP_kinase_N PF13089.6 gi|73668727|ref|YP_304742.1| - 5.8e-35 119.9 0.4 1.3e-34 118.8 0.4 1.6 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PLDc_2 PF13091.6 gi|73668727|ref|YP_304742.1| - 1.1e-09 38.3 0.0 3.2e-05 23.8 0.0 3.3 2 1 0 2 2 2 2 PLD-like domain MR_MLE_C PF13378.6 gi|73668727|ref|YP_304742.1| - 0.29 10.7 0.8 0.62 9.6 0.8 1.5 1 0 0 1 1 1 0 Enolase C-terminal domain-like Cyt-b5 PF00173.28 gi|73668728|ref|YP_304743.1| - 4.3e-10 39.6 0.1 7.9e-10 38.7 0.1 1.5 1 1 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain CARDB PF07705.11 gi|73668729|ref|YP_304744.1| - 1.8e-53 179.0 20.4 1.5e-23 83.0 2.0 3.7 3 0 0 3 3 3 3 CARDB DUF11 PF01345.18 gi|73668729|ref|YP_304744.1| - 1.3e-05 25.4 11.2 0.0082 16.4 0.2 4.6 4 2 0 4 4 4 2 Domain of unknown function DUF11 NPCBM_assoc PF10633.9 gi|73668729|ref|YP_304744.1| - 0.0014 18.8 3.7 0.1 12.9 0.4 3.6 2 1 0 2 2 2 1 NPCBM-associated, NEW3 domain of alpha-galactosidase Phage_TTP_12 PF16461.5 gi|73668729|ref|YP_304744.1| - 0.048 13.4 4.9 5.5 6.7 0.1 3.1 2 1 1 3 3 3 0 Lambda phage tail tube protein, TTP DUF4448 PF14610.6 gi|73668729|ref|YP_304744.1| - 0.2 11.4 0.0 0.2 11.4 0.0 2.5 3 1 0 3 3 3 0 Protein of unknown function (DUF4448) Ppx-GppA PF02541.16 gi|73668730|ref|YP_304745.1| - 2.2e-63 214.4 0.7 3.3e-63 213.8 0.7 1.2 1 0 0 1 1 1 1 Ppx/GppA phosphatase family HD PF01966.22 gi|73668730|ref|YP_304745.1| - 1.8e-08 34.6 2.0 2.4e-08 34.2 0.6 1.9 2 0 0 2 2 2 1 HD domain FtsA PF14450.6 gi|73668730|ref|YP_304745.1| - 0.026 15.0 0.0 0.6 10.6 0.0 2.6 2 1 0 2 2 2 0 Cell division protein FtsA UPF0147 PF03685.13 gi|73668730|ref|YP_304745.1| - 0.11 12.6 0.1 29 4.8 0.0 2.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0147) CHAD PF05235.14 gi|73668731|ref|YP_304746.1| - 1.6e-53 182.0 0.9 3.3e-53 181.0 0.9 1.5 1 0 0 1 1 1 1 CHAD domain CYTH PF01928.21 gi|73668731|ref|YP_304746.1| - 8.7e-23 81.2 0.2 8.7e-23 81.2 0.2 2.4 2 0 0 2 2 2 1 CYTH domain Mem_trans PF03547.18 gi|73668731|ref|YP_304746.1| - 0.17 10.2 1.2 0.27 9.6 1.2 1.3 1 0 0 1 1 1 0 Membrane transport protein RR_TM4-6 PF06459.12 gi|73668731|ref|YP_304746.1| - 0.49 10.2 19.1 1.2 8.9 19.1 1.6 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DDHD PF02862.17 gi|73668731|ref|YP_304746.1| - 0.6 10.2 3.8 1.3 9.2 3.8 1.5 1 0 0 1 1 1 0 DDHD domain Presenilin PF01080.17 gi|73668731|ref|YP_304746.1| - 4 6.1 13.3 8.2 5.1 13.3 1.4 1 0 0 1 1 1 0 Presenilin DUF3807 PF12720.7 gi|73668731|ref|YP_304746.1| - 7 6.9 19.4 16 5.7 19.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Coilin_N PF15862.5 gi|73668731|ref|YP_304746.1| - 7.9 6.3 19.9 19 5.0 19.9 1.7 1 0 0 1 1 1 0 Coilin N-terminus AAA_16 PF13191.6 gi|73668732|ref|YP_304747.1| - 1.4e-10 41.8 0.0 3.1e-09 37.4 0.0 2.4 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|73668732|ref|YP_304747.1| - 1.4e-05 25.5 0.0 2.6e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|73668732|ref|YP_304747.1| - 4.4e-05 23.1 0.0 0.00086 18.9 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region Cdc6_C PF09079.11 gi|73668732|ref|YP_304747.1| - 0.00036 20.4 0.2 0.0021 18.0 0.0 2.3 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|73668732|ref|YP_304747.1| - 0.0015 18.8 0.0 0.0028 17.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|73668732|ref|YP_304747.1| - 0.0051 16.6 0.0 0.0078 16.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain TIP49_C PF17856.1 gi|73668732|ref|YP_304747.1| - 0.0062 16.7 0.0 0.015 15.4 0.0 1.6 1 0 0 1 1 1 1 TIP49 AAA-lid domain DUF815 PF05673.13 gi|73668732|ref|YP_304747.1| - 0.022 13.9 0.1 0.065 12.4 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF815) IstB_IS21 PF01695.17 gi|73668732|ref|YP_304747.1| - 0.025 14.3 0.1 2.1 8.0 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein NTPase_1 PF03266.15 gi|73668732|ref|YP_304747.1| - 0.028 14.4 0.2 0.059 13.3 0.2 1.5 1 0 0 1 1 1 0 NTPase AAA_5 PF07728.14 gi|73668732|ref|YP_304747.1| - 0.046 13.7 0.0 0.086 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_32 PF13654.6 gi|73668732|ref|YP_304747.1| - 0.075 11.8 0.0 8.2 5.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|73668732|ref|YP_304747.1| - 0.11 12.9 0.1 0.28 11.5 0.1 1.7 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|73668732|ref|YP_304747.1| - 0.12 12.0 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain RuvB_N PF05496.12 gi|73668732|ref|YP_304747.1| - 0.16 11.7 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 gi|73668732|ref|YP_304747.1| - 0.16 11.8 0.0 0.49 10.3 0.0 1.7 1 1 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|73668732|ref|YP_304747.1| - 0.18 12.0 0.0 0.38 10.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain Cpn60_TCP1 PF00118.24 gi|73668733|ref|YP_304748.1| - 2.1e-182 607.2 21.0 2.4e-182 607.0 21.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Cytadhesin_P30 PF07271.11 gi|73668733|ref|YP_304748.1| - 0.0047 16.5 1.5 0.0084 15.7 1.5 1.4 1 0 0 1 1 1 1 Cytadhesin P30/P32 Nitro_FeMo-Co PF02579.17 gi|73668733|ref|YP_304748.1| - 0.052 13.9 2.8 0.67 10.3 0.1 3.1 3 0 0 3 3 3 0 Dinitrogenase iron-molybdenum cofactor Beta-lactamase PF00144.24 gi|73668734|ref|YP_304749.1| - 1e-29 103.8 0.0 1.9e-29 102.9 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase DUF169 PF02596.15 gi|73668735|ref|YP_304750.1| - 8.4e-26 91.2 0.2 1.9e-25 90.0 0.2 1.5 1 1 0 1 1 1 1 Uncharacterised ArCR, COG2043 tRNA-synt_2d PF01409.20 gi|73668736|ref|YP_304751.1| - 4e-54 183.7 0.0 4.9e-49 167.0 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) SepRS_C PF18006.1 gi|73668736|ref|YP_304751.1| - 4.1e-13 49.1 0.0 1.1e-12 47.8 0.0 1.8 1 0 0 1 1 1 1 O-phosphoseryl-tRNA synthetase C-terminal domain tRNA_synthFbeta PF17759.1 gi|73668736|ref|YP_304751.1| - 1.2e-08 34.7 0.0 1.4e-05 24.7 0.0 2.2 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain Lambda_Bor PF06291.11 gi|73668736|ref|YP_304751.1| - 0.067 13.2 0.1 0.29 11.2 0.0 2.0 2 0 0 2 2 2 0 Bor protein Translin PF01997.16 gi|73668737|ref|YP_304752.1| - 2.1e-07 31.2 0.1 6.1e-06 26.4 0.1 2.1 1 1 0 1 1 1 1 Translin family UPF0147 PF03685.13 gi|73668738|ref|YP_304753.1| - 1.3e-34 118.1 1.7 1.5e-34 117.9 1.7 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.12 gi|73668738|ref|YP_304753.1| - 0.084 13.2 0.1 2 8.7 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) TAF1_subA PF14929.6 gi|73668738|ref|YP_304753.1| - 0.17 11.3 0.0 0.33 10.3 0.0 1.5 1 1 0 1 1 1 0 TAF RNA Polymerase I subunit A Auto_anti-p27 PF06677.12 gi|73668739|ref|YP_304754.1| - 1.9e-12 47.1 0.3 2.9e-12 46.5 0.3 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Tristanin_u2 PF16638.5 gi|73668739|ref|YP_304754.1| - 0.067 14.0 3.0 0.11 13.3 3.0 1.4 1 0 0 1 1 1 0 Unstructured region on methyltransferase between zinc-fingers DUF1178 PF06676.11 gi|73668739|ref|YP_304754.1| - 0.35 11.3 6.3 0.31 11.4 2.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1178) zf-CCCH_6 PF18585.1 gi|73668739|ref|YP_304754.1| - 1.3 9.0 3.5 0.79 9.6 0.7 2.2 3 0 0 3 3 3 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 DUF2072 PF09845.9 gi|73668739|ref|YP_304754.1| - 2.2 8.5 5.6 4.7 7.5 5.6 1.8 1 1 0 1 1 1 0 Zn-ribbon containing protein ERCC4 PF02732.15 gi|73668740|ref|YP_304755.1| - 8.4e-26 91.0 0.0 3e-25 89.2 0.0 2.0 2 0 0 2 2 2 1 ERCC4 domain Helicase_C PF00271.31 gi|73668740|ref|YP_304755.1| - 1.6e-22 80.0 0.0 3.4e-20 72.4 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|73668740|ref|YP_304755.1| - 1.5e-17 63.9 0.1 1.1e-16 61.1 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|73668740|ref|YP_304755.1| - 7.5e-15 55.3 1.6 2.4e-14 53.7 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_2 PF12826.7 gi|73668740|ref|YP_304755.1| - 1.1e-09 38.3 0.0 3.9e-09 36.5 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|73668740|ref|YP_304755.1| - 4.1e-09 36.9 0.3 1.5e-08 35.1 0.3 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH PF00633.23 gi|73668740|ref|YP_304755.1| - 0.00026 20.7 0.1 0.0044 16.8 0.1 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 gi|73668740|ref|YP_304755.1| - 0.0022 18.6 3.0 0.012 16.2 0.1 3.1 3 0 0 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold HGTP_anticodon PF03129.20 gi|73668741|ref|YP_304756.1| - 1.1e-21 76.8 1.1 1.1e-19 70.3 0.1 3.9 5 0 0 5 5 5 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|73668741|ref|YP_304756.1| - 4.6e-09 36.5 0.0 1.5e-08 34.9 0.0 1.9 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HEPN_Apea PF18739.1 gi|73668742|ref|YP_304757.1| - 0.0075 16.7 1.5 0.0075 16.7 1.5 2.8 2 1 0 2 2 2 1 Apea-like HEPN XPG_I PF00867.18 gi|73668744|ref|YP_304759.1| - 6.4e-28 97.0 0.1 5.1e-27 94.1 0.0 2.3 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 gi|73668744|ref|YP_304759.1| - 1.6e-20 73.4 0.0 3.6e-20 72.3 0.0 1.6 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|73668744|ref|YP_304759.1| - 4.7e-05 23.9 0.4 0.00017 22.1 0.0 2.0 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 gi|73668744|ref|YP_304759.1| - 0.051 14.2 0.0 0.15 12.7 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix domain DGC PF08859.11 gi|73668745|ref|YP_304760.1| - 1.8e-22 79.4 0.2 2.2e-22 79.1 0.2 1.0 1 0 0 1 1 1 1 DGC domain DNA_RNApol_7kD PF03604.13 gi|73668746|ref|YP_304761.1| - 3.1e-05 23.5 5.1 0.23 11.2 0.9 4.5 3 1 0 3 3 3 2 DNA directed RNA polymerase, 7 kDa subunit Desulfoferrod_N PF06397.12 gi|73668746|ref|YP_304761.1| - 1 9.1 29.0 1.7 8.3 1.9 4.5 4 1 0 4 4 4 0 Desulfoferrodoxin, N-terminal domain CbiM PF01891.16 gi|73668748|ref|YP_304763.1| - 1.2e-48 165.7 17.9 1.4e-48 165.5 17.9 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region Transgly_assoc PF04226.13 gi|73668748|ref|YP_304763.1| - 0.29 11.4 5.1 20 5.5 0.0 3.7 3 0 0 3 3 3 0 Transglycosylase associated protein CbiN PF02553.15 gi|73668749|ref|YP_304764.1| - 1e-23 83.1 0.1 1.3e-23 82.7 0.1 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN AA_permease PF00324.21 gi|73668749|ref|YP_304764.1| - 0.12 10.9 1.6 0.23 10.0 0.7 1.7 1 1 1 2 2 2 0 Amino acid permease CbiQ PF02361.16 gi|73668750|ref|YP_304765.1| - 8e-42 143.3 7.3 8e-42 143.3 7.3 1.5 2 0 0 2 2 2 1 Cobalt transport protein ABC_tran PF00005.27 gi|73668751|ref|YP_304766.1| - 2.1e-30 106.0 0.0 3.4e-30 105.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668751|ref|YP_304766.1| - 1.5e-10 41.4 0.1 0.0002 21.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668751|ref|YP_304766.1| - 2.4e-07 30.4 0.1 2e-06 27.4 0.0 2.3 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73668751|ref|YP_304766.1| - 0.001 18.8 0.1 0.0022 17.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|73668751|ref|YP_304766.1| - 0.0029 17.4 0.4 0.028 14.1 0.1 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|73668751|ref|YP_304766.1| - 0.0098 16.4 0.0 0.021 15.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|73668751|ref|YP_304766.1| - 0.083 13.2 0.0 0.33 11.2 0.0 1.9 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|73668751|ref|YP_304766.1| - 0.091 12.7 0.0 0.22 11.4 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase Peptidase_M17 PF00883.21 gi|73668751|ref|YP_304766.1| - 0.094 12.0 0.2 0.26 10.5 0.0 1.8 2 1 0 2 2 2 0 Cytosol aminopeptidase family, catalytic domain MMR_HSR1 PF01926.23 gi|73668751|ref|YP_304766.1| - 0.097 12.8 0.5 1.1 9.3 0.2 2.7 2 1 0 2 2 2 0 50S ribosome-binding GTPase BCA_ABC_TP_C PF12399.8 gi|73668751|ref|YP_304766.1| - 0.099 12.6 0.0 0.39 10.7 0.0 2.0 2 0 0 2 2 2 0 Branched-chain amino acid ATP-binding cassette transporter IstB_IS21 PF01695.17 gi|73668751|ref|YP_304766.1| - 0.11 12.2 0.1 7.3 6.3 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein Cation_efflux PF01545.21 gi|73668752|ref|YP_304767.1| - 1.6e-37 129.1 14.2 2e-37 128.8 14.2 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|73668752|ref|YP_304767.1| - 3.1e-15 56.0 10.6 3.1e-15 56.0 10.6 1.9 3 0 0 3 3 3 1 Dimerisation domain of Zinc Transporter YjcB PF15940.5 gi|73668752|ref|YP_304767.1| - 0.032 14.4 0.3 0.18 12.0 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function PlyB_C PF18684.1 gi|73668752|ref|YP_304767.1| - 0.13 12.0 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Pleurotolysin B C-terminal domain Cation_ATPase_C PF00689.21 gi|73668752|ref|YP_304767.1| - 1.8 8.2 8.5 1.2 8.9 1.5 2.3 1 1 1 2 2 2 0 Cation transporting ATPase, C-terminus DUF2104 PF09877.9 gi|73668752|ref|YP_304767.1| - 5 7.4 7.8 0.92 9.8 1.1 2.4 2 0 0 2 2 2 0 Predicted membrane protein (DUF2104) PriA_CRR PF18319.1 gi|73668753|ref|YP_304768.1| - 0.00015 21.7 4.0 0.25 11.4 0.1 3.0 3 0 0 3 3 3 2 PriA DNA helicase Cys-rich region (CRR) domain PhnA_Zn_Ribbon PF08274.12 gi|73668753|ref|YP_304768.1| - 0.00024 21.0 4.2 0.18 11.8 0.1 3.1 3 0 0 3 3 3 2 PhnA Zinc-Ribbon Desulfoferrod_N PF06397.12 gi|73668753|ref|YP_304768.1| - 0.00079 19.0 30.9 0.1 12.3 11.4 4.4 2 2 0 2 2 2 1 Desulfoferrodoxin, N-terminal domain zf-BED PF02892.15 gi|73668753|ref|YP_304768.1| - 0.027 14.5 11.6 0.13 12.3 0.3 3.0 2 1 1 3 3 3 0 BED zinc finger DNA_RNApol_7kD PF03604.13 gi|73668753|ref|YP_304768.1| - 0.091 12.5 0.1 0.091 12.5 0.1 3.6 4 0 0 4 4 4 0 DNA directed RNA polymerase, 7 kDa subunit GHMP_kinases_N PF00288.26 gi|73668754|ref|YP_304769.1| - 7.9e-06 26.0 1.3 1.6e-05 25.1 1.3 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|73668754|ref|YP_304769.1| - 0.0047 17.3 0.0 0.0098 16.2 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal Terminase_3 PF04466.13 gi|73668754|ref|YP_304769.1| - 0.18 11.3 0.0 0.28 10.7 0.0 1.3 1 0 0 1 1 1 0 Phage terminase large subunit iPGM_N PF06415.13 gi|73668755|ref|YP_304770.1| - 2.2e-87 292.1 0.0 3e-87 291.6 0.0 1.2 1 0 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Metalloenzyme PF01676.18 gi|73668755|ref|YP_304770.1| - 2.5e-81 272.7 0.0 2.9e-81 272.5 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|73668755|ref|YP_304770.1| - 0.00051 19.7 0.0 0.00096 18.8 0.0 1.4 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 gi|73668755|ref|YP_304770.1| - 0.017 15.2 0.1 0.044 13.9 0.1 1.6 2 0 0 2 2 2 0 PglZ domain Alk_phosphatase PF00245.20 gi|73668755|ref|YP_304770.1| - 0.031 13.3 0.1 0.051 12.5 0.1 1.3 1 0 0 1 1 1 0 Alkaline phosphatase Gpr1_Fun34_YaaH PF01184.19 gi|73668756|ref|YP_304771.1| - 1e-41 142.9 16.2 1.3e-41 142.5 16.2 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family UbiA PF01040.18 gi|73668757|ref|YP_304772.1| - 7.7e-12 45.0 14.8 4.3e-11 42.6 14.9 1.8 1 1 0 1 1 1 1 UbiA prenyltransferase family Wzy_C PF04932.15 gi|73668758|ref|YP_304773.1| - 0.0046 16.6 0.0 0.005 16.5 0.0 1.1 1 0 0 1 1 1 1 O-Antigen ligase YopD PF05844.12 gi|73668758|ref|YP_304773.1| - 0.027 13.5 0.1 0.033 13.2 0.1 1.0 1 0 0 1 1 1 0 YopD protein DUF1772 PF08592.11 gi|73668758|ref|YP_304773.1| - 0.03 14.6 0.0 0.033 14.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) DUF948 PF06103.11 gi|73668758|ref|YP_304773.1| - 0.043 14.1 1.1 0.11 12.8 1.1 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF751 PF05421.11 gi|73668758|ref|YP_304773.1| - 0.047 14.4 1.4 0.073 13.8 1.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF751) HSBP1 PF06825.12 gi|73668758|ref|YP_304773.1| - 0.052 13.4 2.6 0.92 9.4 2.6 2.1 1 1 0 1 1 1 0 Heat shock factor binding protein 1 ArsP_2 PF11449.8 gi|73668758|ref|YP_304773.1| - 0.15 11.3 0.7 0.3 10.2 0.0 1.6 1 1 1 2 2 2 0 Putative, 10TM heavy-metal exporter MtrG PF04210.13 gi|73668758|ref|YP_304773.1| - 0.18 11.7 1.9 3.9 7.4 0.2 2.3 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G COX16 PF14138.6 gi|73668758|ref|YP_304773.1| - 4.1 8.0 7.6 1.5e+02 3.0 7.6 2.1 1 1 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 DUF3040 PF11239.8 gi|73668758|ref|YP_304773.1| - 4.7 7.6 7.1 1.2 9.4 0.1 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) Pentapeptide PF00805.22 gi|73668759|ref|YP_304774.1| - 6.4e-35 118.4 13.2 2.2e-15 56.0 1.2 3.7 1 1 2 3 3 3 3 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|73668759|ref|YP_304774.1| - 3e-16 59.4 0.0 9.9e-09 35.3 0.0 2.2 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|73668759|ref|YP_304774.1| - 6e-10 39.1 0.0 4.7e-05 23.5 0.0 3.2 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) MalF_P2 PF14785.6 gi|73668759|ref|YP_304774.1| - 0.043 13.9 0.0 0.045 13.8 0.0 1.3 1 0 0 1 1 1 0 Maltose transport system permease protein MalF P2 domain PHP PF02811.19 gi|73668760|ref|YP_304775.1| - 5.7e-06 26.7 0.0 9.8e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 PHP domain PHP_C PF13263.6 gi|73668760|ref|YP_304775.1| - 0.00089 19.0 0.0 0.0021 17.8 0.0 1.7 1 0 0 1 1 1 1 PHP-associated Peptidase_M74 PF03411.13 gi|73668760|ref|YP_304775.1| - 0.13 11.8 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Penicillin-insensitive murein endopeptidase OrfB_Zn_ribbon PF07282.11 gi|73668761|ref|YP_304776.1| - 5.4e-26 90.3 1.4 8.3e-26 89.7 0.2 1.9 2 0 0 2 2 2 1 Putative transposase DNA-binding domain HypA PF01155.19 gi|73668761|ref|YP_304776.1| - 0.0032 17.5 0.1 0.0074 16.3 0.1 1.6 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Anti-TRAP PF15777.5 gi|73668761|ref|YP_304776.1| - 0.23 11.5 1.1 0.5 10.4 1.1 1.5 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-ribbon_3 PF13248.6 gi|73668761|ref|YP_304776.1| - 0.47 9.9 3.4 1.7 8.2 0.2 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_17 PF17120.5 gi|73668761|ref|YP_304776.1| - 0.96 9.1 5.1 0.66 9.6 2.8 1.8 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type UPF0547 PF10571.9 gi|73668761|ref|YP_304776.1| - 1.7 8.8 7.4 0.57 10.3 1.9 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.6 gi|73668761|ref|YP_304776.1| - 9.8 6.0 8.8 13 5.6 6.5 2.5 2 1 0 2 2 2 0 zinc-ribbon domain Alk_phosphatase PF00245.20 gi|73668762|ref|YP_304777.1| - 1.8e-93 313.8 0.2 2.7e-93 313.2 0.2 1.3 1 0 0 1 1 1 1 Alkaline phosphatase Metalloenzyme PF01676.18 gi|73668762|ref|YP_304777.1| - 3.6e-05 23.2 0.5 0.0002 20.8 0.5 2.0 1 1 0 1 1 1 1 Metalloenzyme superfamily Methyltransf_28 PF02636.17 gi|73668762|ref|YP_304777.1| - 0.0036 17.0 0.0 0.0057 16.3 0.0 1.3 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Glyco_trans_1_3 PF13528.6 gi|73668763|ref|YP_304778.1| - 6.6e-14 51.9 0.0 5.5e-13 48.9 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.16 gi|73668763|ref|YP_304778.1| - 1.6e-13 50.9 0.0 3.6e-13 49.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_28 PF03033.20 gi|73668763|ref|YP_304778.1| - 1.3e-05 25.3 0.0 2.4e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Glyco_transf_4 PF13439.6 gi|73668763|ref|YP_304778.1| - 2e-05 24.6 0.0 4.6e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|73668763|ref|YP_304778.1| - 0.00046 20.6 0.0 0.001 19.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|73668763|ref|YP_304778.1| - 0.00052 20.1 0.1 0.0013 18.8 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase 4-like UDPGT PF00201.18 gi|73668763|ref|YP_304778.1| - 0.03 13.1 0.0 0.36 9.6 0.0 2.0 2 0 0 2 2 2 0 UDP-glucoronosyl and UDP-glucosyl transferase Metallophos PF00149.28 gi|73668764|ref|YP_304779.1| - 3.3e-14 53.9 0.5 4.7e-14 53.4 0.5 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|73668764|ref|YP_304779.1| - 4.5e-11 43.2 0.0 7.6e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|73668764|ref|YP_304779.1| - 0.00049 19.5 0.0 0.0012 18.2 0.0 1.6 2 0 0 2 2 2 1 Metallophosphoesterase, calcineurin superfamily MutL PF13941.6 gi|73668764|ref|YP_304779.1| - 0.043 12.4 0.0 0.059 12.0 0.0 1.1 1 0 0 1 1 1 0 MutL protein APH PF01636.23 gi|73668765|ref|YP_304780.1| - 5.9e-08 32.9 0.0 8.7e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 gi|73668765|ref|YP_304780.1| - 8.3e-06 25.5 0.3 0.082 12.5 0.2 2.3 1 1 0 2 2 2 2 RIO1 family VWA_2 PF13519.6 gi|73668767|ref|YP_304782.1| - 5e-12 46.4 0.1 3.7e-11 43.6 0.0 2.3 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA PF00092.28 gi|73668767|ref|YP_304782.1| - 2.3e-09 37.7 0.0 6.8e-09 36.2 0.0 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|73668767|ref|YP_304782.1| - 6.6e-08 32.6 0.0 1.4e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|73668767|ref|YP_304782.1| - 4.1e-07 29.6 0.0 6.8e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein DUF2201 PF09967.9 gi|73668767|ref|YP_304782.1| - 0.0027 17.8 0.0 0.0052 16.9 0.0 1.4 1 0 0 1 1 1 1 VWA-like domain (DUF2201) WDCP PF15390.6 gi|73668767|ref|YP_304782.1| - 0.89 7.9 7.8 1.3 7.3 7.8 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family AAA_5 PF07728.14 gi|73668768|ref|YP_304783.1| - 1.5e-27 96.3 0.0 2.7e-27 95.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_8 PF17868.1 gi|73668768|ref|YP_304783.1| - 1.2e-19 69.9 1.6 3e-19 68.7 1.6 1.7 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 gi|73668768|ref|YP_304783.1| - 3.3e-07 30.8 0.0 7.9e-07 29.6 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 gi|73668768|ref|YP_304783.1| - 1.1e-06 28.6 0.0 1.7e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|73668768|ref|YP_304783.1| - 0.0036 17.7 0.0 0.016 15.6 0.0 2.1 3 0 0 3 3 3 1 AAA ATPase domain CAF1 PF04857.20 gi|73668768|ref|YP_304783.1| - 0.0079 15.4 0.7 0.014 14.5 0.7 1.4 1 0 0 1 1 1 1 CAF1 family ribonuclease Lant_dehydr_C PF14028.6 gi|73668768|ref|YP_304783.1| - 0.0088 15.6 0.1 0.24 10.9 0.0 2.1 2 0 0 2 2 2 1 Lantibiotic biosynthesis dehydratase C-term Mg_chelatase PF01078.21 gi|73668768|ref|YP_304783.1| - 0.01 15.3 0.1 0.028 13.8 0.0 1.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|73668768|ref|YP_304783.1| - 0.012 15.2 0.0 0.058 12.9 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region ATPase PF06745.13 gi|73668768|ref|YP_304783.1| - 0.028 13.8 0.2 2 7.7 0.0 2.7 2 0 0 2 2 2 0 KaiC DASH_Spc34 PF08657.10 gi|73668768|ref|YP_304783.1| - 0.037 13.8 2.6 0.078 12.8 2.6 1.5 1 0 0 1 1 1 0 DASH complex subunit Spc34 RuvB_N PF05496.12 gi|73668768|ref|YP_304783.1| - 0.039 13.7 0.1 0.13 12.0 0.1 1.8 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 gi|73668768|ref|YP_304783.1| - 0.067 12.9 0.0 0.76 9.5 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain IL12 PF03039.14 gi|73668768|ref|YP_304783.1| - 0.084 12.2 0.2 0.18 11.1 0.2 1.5 1 0 0 1 1 1 0 Interleukin-12 alpha subunit Put_Phosphatase PF06888.12 gi|73668768|ref|YP_304783.1| - 0.1 12.0 0.5 1.2 8.4 0.0 2.2 2 0 0 2 2 2 0 Putative Phosphatase MCM PF00493.23 gi|73668768|ref|YP_304783.1| - 0.11 11.5 0.0 0.7 9.0 0.0 2.0 2 0 0 2 2 2 0 MCM P-loop domain Wtap PF17098.5 gi|73668768|ref|YP_304783.1| - 0.16 11.9 5.3 0.58 10.1 0.0 3.1 2 1 0 2 2 2 0 WTAP/Mum2p family AAA_11 PF13086.6 gi|73668768|ref|YP_304783.1| - 0.32 10.7 1.3 2.4 7.8 0.0 2.3 2 1 0 2 2 2 0 AAA domain DUF4974 PF16344.5 gi|73668768|ref|YP_304783.1| - 0.79 9.8 5.6 1.5 8.9 0.9 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4974) ThiF PF00899.21 gi|73668769|ref|YP_304784.1| - 1.3e-68 231.0 0.0 1.6e-68 230.7 0.0 1.0 1 0 0 1 1 1 1 ThiF family 2-Hacid_dh_C PF02826.19 gi|73668769|ref|YP_304784.1| - 0.009 15.4 0.9 1.4 8.2 0.1 2.1 1 1 1 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|73668769|ref|YP_304784.1| - 0.01 15.9 0.2 0.063 13.3 0.0 2.0 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|73668769|ref|YP_304784.1| - 0.034 14.4 0.5 0.17 12.1 0.5 1.9 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|73668769|ref|YP_304784.1| - 0.14 12.0 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AhpC-TSA PF00578.21 gi|73668771|ref|YP_304786.1| - 1.6e-30 105.5 0.0 1.9e-30 105.3 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|73668771|ref|YP_304786.1| - 1.4e-18 67.0 0.0 1.6e-18 66.8 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|73668771|ref|YP_304786.1| - 0.0011 18.9 0.0 0.0015 18.4 0.0 1.4 1 1 0 1 1 1 1 SCO1/SenC Cys_Met_Meta_PP PF01053.20 gi|73668771|ref|YP_304786.1| - 0.18 10.3 0.1 1.8 7.0 0.0 1.9 2 0 0 2 2 2 0 Cys/Met metabolism PLP-dependent enzyme NosD PF05048.13 gi|73668772|ref|YP_304787.1| - 1.4e-43 149.0 28.8 1.4e-43 149.0 28.8 4.6 3 2 2 5 5 4 1 Periplasmic copper-binding protein (NosD) Cytochrom_D1 PF02239.16 gi|73668772|ref|YP_304787.1| - 2.3e-16 59.3 9.3 1.5e-06 27.0 0.3 3.3 1 1 2 3 3 3 3 Cytochrome D1 heme domain Beta_helix PF13229.6 gi|73668772|ref|YP_304787.1| - 8.8e-14 51.6 42.7 2e-12 47.3 30.5 5.0 4 2 1 5 5 4 2 Right handed beta helix region Lactonase PF10282.9 gi|73668772|ref|YP_304787.1| - 7e-10 38.7 5.3 7.8e-09 35.2 0.9 3.0 1 1 1 3 3 3 2 Lactonase, 7-bladed beta-propeller PKD PF00801.20 gi|73668772|ref|YP_304787.1| - 6.5e-08 32.3 3.1 3.3e-07 30.1 3.1 2.3 1 0 0 1 1 1 1 PKD domain NHL PF01436.21 gi|73668772|ref|YP_304787.1| - 1.2e-07 31.4 11.1 1.9 8.7 0.1 6.8 6 0 0 6 6 6 4 NHL repeat SGL PF08450.12 gi|73668772|ref|YP_304787.1| - 5.4e-05 22.9 9.7 0.0013 18.4 1.7 3.6 1 1 3 4 4 4 3 SMP-30/Gluconolactonase/LRE-like region Phytase-like PF13449.6 gi|73668772|ref|YP_304787.1| - 0.00027 21.0 0.0 0.073 13.0 0.0 2.7 2 1 0 2 2 2 1 Esterase-like activity of phytase PQQ PF01011.21 gi|73668772|ref|YP_304787.1| - 0.006 16.5 14.7 5.4 7.1 0.2 6.0 5 0 0 5 5 5 1 PQQ enzyme repeat DUF4221 PF13970.6 gi|73668772|ref|YP_304787.1| - 0.027 14.0 0.0 0.15 11.6 0.0 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4221) Arylesterase PF01731.20 gi|73668772|ref|YP_304787.1| - 0.19 12.0 14.2 13 6.1 0.1 5.9 3 2 4 7 7 7 0 Arylesterase Arm-DNA-bind_3 PF13356.6 gi|73668772|ref|YP_304787.1| - 0.19 12.1 0.8 1e+02 3.4 0.2 3.9 2 1 0 2 2 2 0 Arm DNA-binding domain PCC_BT PF18140.1 gi|73668772|ref|YP_304787.1| - 0.62 10.4 15.1 0.14 12.5 1.5 3.8 1 1 2 3 3 3 0 Propionyl-coenzyme A carboxylase BT domain MNR PF15718.5 gi|73668772|ref|YP_304787.1| - 1.5 6.9 2.5 29 2.6 0.1 3.0 1 1 3 4 4 4 0 Protein moonraker dCache_1 PF02743.18 gi|73668773|ref|YP_304788.1| - 3.4e-18 66.3 3.5 5.2e-18 65.7 3.5 1.3 1 0 0 1 1 1 1 Cache domain Cache_3-Cache_2 PF17201.4 gi|73668773|ref|YP_304788.1| - 5.6e-06 25.8 0.0 9.1e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 Cache 3/Cache 2 fusion domain dCache_2 PF08269.11 gi|73668773|ref|YP_304788.1| - 0.00079 18.7 0.0 0.0017 17.6 0.0 1.5 1 0 0 1 1 1 1 Cache domain Sigma_reg_N PF13800.6 gi|73668773|ref|YP_304788.1| - 0.0063 16.8 6.5 0.57 10.5 0.0 3.7 3 0 0 3 3 3 2 Sigma factor regulator N-terminal Fig1 PF12351.8 gi|73668773|ref|YP_304788.1| - 0.25 11.3 7.1 5.2 7.0 0.9 3.4 3 0 0 3 3 3 0 Ca2+ regulator and membrane fusion protein Fig1 DUF4131 PF13567.6 gi|73668773|ref|YP_304788.1| - 1.1 8.9 8.7 1.4 8.6 0.6 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4131) DUF2976 PF11190.8 gi|73668773|ref|YP_304788.1| - 1.3 8.9 3.8 4.5 7.1 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2976) Aminotran_5 PF00266.19 gi|73668774|ref|YP_304789.1| - 5e-38 131.0 0.0 1e-37 130.0 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V UPF0113_N PF17833.1 gi|73668775|ref|YP_304790.1| - 0.055 14.0 0.5 0.77 10.4 0.5 2.4 1 1 0 1 1 1 0 UPF0113 Pre-PUA domain DUF4969 PF16339.5 gi|73668775|ref|YP_304790.1| - 0.072 13.5 0.7 18 5.8 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4969) CxxCxxCC PF03692.15 gi|73668776|ref|YP_304791.1| - 3.8e-07 30.7 10.4 7.9e-07 29.7 9.7 1.9 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain FadA PF09403.10 gi|73668776|ref|YP_304791.1| - 0.026 15.0 4.6 0.99 9.9 0.1 2.7 2 1 1 3 3 3 0 Adhesion protein FadA YAF2_RYBP PF17219.3 gi|73668776|ref|YP_304791.1| - 0.2 11.3 0.3 2.1 8.0 0.0 2.3 2 0 0 2 2 2 0 Yaf2/RYBP C-terminal binding motif Y1_Tnp PF01797.16 gi|73668777|ref|YP_304792.1| - 1.2e-31 109.3 0.0 1.5e-31 109.0 0.0 1.1 1 0 0 1 1 1 1 Transposase IS200 like Lipid_DES PF08557.10 gi|73668777|ref|YP_304792.1| - 0.1 12.1 0.0 0.26 10.8 0.0 1.8 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) Aldolase_II PF00596.21 gi|73668778|ref|YP_304793.1| - 1.6e-33 116.2 0.1 1.8e-33 116.0 0.1 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain CDP-OH_P_transf PF01066.21 gi|73668779|ref|YP_304794.1| - 3.4e-14 53.4 0.5 3.4e-14 53.4 0.5 2.5 3 1 0 3 3 3 1 CDP-alcohol phosphatidyltransferase Archease PF01951.16 gi|73668780|ref|YP_304795.1| - 2.1e-49 167.3 0.7 2.3e-49 167.2 0.7 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) RtcB PF01139.17 gi|73668781|ref|YP_304796.1| - 1.1e-172 574.8 0.2 1.3e-172 574.6 0.2 1.1 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB CNDH2_N PF06278.11 gi|73668782|ref|YP_304797.1| - 0.0044 17.2 0.3 0.011 16.0 0.1 1.7 2 0 0 2 2 2 1 Condensin II complex subunit CAP-H2 or CNDH2, N-terminal MtrH PF02007.18 gi|73668783|ref|YP_304798.1| - 2.9e-152 506.0 0.7 3.3e-152 505.8 0.7 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit MtrG PF04210.13 gi|73668784|ref|YP_304799.1| - 3.1e-30 103.8 0.6 3.4e-30 103.7 0.6 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G TIM PF00121.18 gi|73668784|ref|YP_304799.1| - 0.0045 16.4 0.0 0.0052 16.2 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase MtrF PF09472.10 gi|73668785|ref|YP_304800.1| - 4.3e-29 99.7 1.0 4.8e-29 99.6 1.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrA PF04208.14 gi|73668786|ref|YP_304801.1| - 3.1e-86 287.4 0.9 4.2e-86 287.0 0.9 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.10 gi|73668786|ref|YP_304801.1| - 0.003 16.9 0.3 0.0086 15.5 0.3 1.8 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrB PF05440.12 gi|73668787|ref|YP_304802.1| - 1.3e-38 131.3 0.0 1.5e-38 131.1 0.0 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrC PF04211.13 gi|73668788|ref|YP_304803.1| - 2.5e-106 354.6 29.7 2.9e-106 354.4 29.7 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C TssN PF17555.2 gi|73668788|ref|YP_304803.1| - 0.94 8.8 2.9 1.6 8.0 2.9 1.4 1 0 0 1 1 1 0 Type VI secretion system, TssN MtrD PF04207.12 gi|73668789|ref|YP_304804.1| - 4.3e-101 337.2 27.8 5.2e-101 336.9 27.8 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D Pilin_N PF07790.11 gi|73668789|ref|YP_304804.1| - 0.029 15.3 0.7 0.029 15.3 0.7 3.0 3 0 0 3 3 3 0 Archaeal Type IV pilin, N-terminal MtrE PF04206.12 gi|73668790|ref|YP_304805.1| - 4.3e-137 455.8 10.5 4.9e-137 455.6 10.5 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E DUF1673 PF07895.11 gi|73668790|ref|YP_304805.1| - 0.0045 16.7 3.0 0.23 11.2 0.3 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1673) AP_endonuc_2 PF01261.24 gi|73668791|ref|YP_304806.1| - 3.3e-28 98.6 0.0 3.9e-28 98.3 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel SSF PF00474.17 gi|73668792|ref|YP_304807.1| - 3e-37 128.4 31.5 5.4e-37 127.6 31.5 1.4 1 0 0 1 1 1 1 Sodium:solute symporter family TOBE PF03459.17 gi|73668793|ref|YP_304808.1| - 7e-16 58.3 0.1 1.5e-15 57.2 0.1 1.6 1 0 0 1 1 1 1 TOBE domain HTH_1 PF00126.27 gi|73668793|ref|YP_304808.1| - 2.6e-10 40.1 0.0 4.1e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_23 PF13384.6 gi|73668793|ref|YP_304808.1| - 0.0066 16.2 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Rad9_Rad53_bind PF08605.10 gi|73668793|ref|YP_304808.1| - 0.027 14.6 0.1 0.041 14.1 0.1 1.3 1 0 0 1 1 1 0 Fungal Rad9-like Rad53-binding TOBE_3 PF12857.7 gi|73668793|ref|YP_304808.1| - 0.1 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 TOBE-like domain TOBE_2 PF08402.10 gi|73668793|ref|YP_304808.1| - 0.11 12.7 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 TOBE domain HTH_50 PF18024.1 gi|73668793|ref|YP_304808.1| - 0.13 11.9 0.0 0.31 10.7 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|73668793|ref|YP_304808.1| - 0.14 12.2 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix DDE_Tnp_1 PF01609.21 gi|73668794|ref|YP_304809.1| - 1.1e-21 77.5 0.8 1.5e-21 77.1 0.8 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73668794|ref|YP_304809.1| - 0.013 15.2 0.2 0.44 10.2 0.2 2.3 1 1 0 1 1 1 0 DDE superfamily endonuclease NPCBM_assoc PF10633.9 gi|73668795|ref|YP_304810.1| - 4.4e-05 23.6 0.1 0.1 12.8 0.0 3.4 3 0 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|73668795|ref|YP_304810.1| - 0.02 15.1 2.1 0.44 10.8 0.1 2.9 2 1 1 3 3 3 0 CARDB NPCBM_assoc PF10633.9 gi|73668796|ref|YP_304811.1| - 9.8e-05 22.5 0.3 0.6 10.4 0.1 3.4 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF3520 PF12034.8 gi|73668796|ref|YP_304811.1| - 0.018 15.2 4.2 0.34 11.0 0.1 3.5 2 1 2 4 4 4 0 Domain of unknown function (DUF3520) LRRC37AB_C PF14914.6 gi|73668796|ref|YP_304811.1| - 0.042 13.8 0.0 0.13 12.2 0.0 1.8 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain MMPL PF03176.15 gi|73668797|ref|YP_304812.1| - 4.5e-59 200.0 17.0 2.2e-31 109.0 3.0 2.1 2 0 0 2 2 2 2 MMPL family Sterol-sensing PF12349.8 gi|73668797|ref|YP_304812.1| - 4.9e-14 52.4 5.6 3.3e-07 30.3 0.7 2.5 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation ACR_tran PF00873.19 gi|73668797|ref|YP_304812.1| - 3e-10 38.5 21.5 1.5e-07 29.5 5.8 2.3 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 gi|73668797|ref|YP_304812.1| - 3.6e-10 39.5 8.9 3.6e-10 39.5 8.9 2.3 2 0 0 2 2 2 1 Protein export membrane protein Patched PF02460.18 gi|73668797|ref|YP_304812.1| - 1.3e-07 30.2 11.3 0.00037 18.7 0.9 2.4 2 0 0 2 2 2 2 Patched family Trp_oprn_chp PF09534.10 gi|73668797|ref|YP_304812.1| - 0.031 14.1 0.3 18 5.1 0.0 3.6 3 0 0 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) TrmB PF01978.19 gi|73668798|ref|YP_304813.1| - 1.3e-23 82.6 0.4 2e-23 82.1 0.4 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|73668798|ref|YP_304813.1| - 3.8e-05 23.0 0.0 5.2e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_34 PF13601.6 gi|73668798|ref|YP_304813.1| - 0.00041 20.5 0.1 0.0018 18.4 0.0 2.0 2 1 0 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|73668798|ref|YP_304813.1| - 0.00055 19.7 0.3 0.0014 18.4 0.0 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|73668798|ref|YP_304813.1| - 0.0012 19.3 0.1 0.0036 17.7 0.1 1.8 1 1 1 2 2 2 1 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|73668798|ref|YP_304813.1| - 0.0023 18.3 0.1 0.0056 17.0 0.0 1.7 1 1 0 1 1 1 1 Transcriptional regulator HTH_46 PF15977.5 gi|73668798|ref|YP_304813.1| - 0.027 14.5 0.0 0.083 12.9 0.0 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding GntR PF00392.21 gi|73668798|ref|YP_304813.1| - 0.032 13.9 0.0 0.066 12.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 gi|73668798|ref|YP_304813.1| - 0.033 14.1 0.1 0.066 13.1 0.1 1.6 1 1 0 1 1 1 0 MarR family PadR PF03551.14 gi|73668798|ref|YP_304813.1| - 0.041 13.9 0.2 0.15 12.1 0.1 1.9 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family Helicase_C_2 PF13307.6 gi|73668798|ref|YP_304813.1| - 0.041 14.0 0.2 0.058 13.6 0.2 1.2 1 0 0 1 1 1 0 Helicase C-terminal domain AAA PF00004.29 gi|73668798|ref|YP_304813.1| - 0.062 13.7 0.1 0.088 13.2 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) HTH_20 PF12840.7 gi|73668798|ref|YP_304813.1| - 0.071 13.2 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Lactamase_B_3 PF13483.6 gi|73668799|ref|YP_304814.1| - 3e-38 131.3 0.0 3.7e-38 131.0 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|73668799|ref|YP_304814.1| - 1.6e-15 57.2 0.2 2.9e-15 56.3 0.2 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|73668799|ref|YP_304814.1| - 0.002 18.2 0.9 0.17 11.9 0.1 2.4 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Rpr2 PF04032.16 gi|73668800|ref|YP_304815.1| - 1.6e-14 53.9 0.2 2.7e-14 53.2 0.2 1.4 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF4674 PF15719.5 gi|73668800|ref|YP_304815.1| - 0.00011 22.3 1.2 0.036 14.1 0.0 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF4674) SRP19 PF01922.17 gi|73668801|ref|YP_304816.1| - 2.1e-23 83.1 0.1 2.7e-23 82.7 0.1 1.2 1 0 0 1 1 1 1 SRP19 protein Pilin_N PF07790.11 gi|73668804|ref|YP_304819.1| - 9.1e-11 42.5 0.1 1.2e-09 39.0 0.0 2.2 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Fe_bilin_red PF05996.12 gi|73668804|ref|YP_304819.1| - 0.12 12.0 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Ferredoxin-dependent bilin reductase APG6_N PF17675.1 gi|73668805|ref|YP_304820.1| - 4.1e-05 24.1 5.2 4.8e-05 23.9 5.2 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region DUF3693 PF12472.8 gi|73668805|ref|YP_304820.1| - 0.0094 15.6 2.3 0.015 14.9 1.4 1.8 1 1 0 1 1 1 1 Phage related protein DUF2796 PF10986.8 gi|73668805|ref|YP_304820.1| - 0.097 12.6 2.1 0.12 12.4 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2796) DUF3450 PF11932.8 gi|73668805|ref|YP_304820.1| - 0.3 10.4 7.3 0.41 9.9 7.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) CLN3 PF02487.17 gi|73668805|ref|YP_304820.1| - 0.73 8.8 2.5 0.85 8.6 2.5 1.1 1 0 0 1 1 1 0 CLN3 protein FapA PF03961.13 gi|73668805|ref|YP_304820.1| - 1.9 7.0 9.8 2.4 6.7 9.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A MTH865 PF07747.11 gi|73668806|ref|YP_304821.1| - 7.2e-23 80.2 0.1 8e-23 80.0 0.1 1.0 1 0 0 1 1 1 1 MTH865-like family PASTA PF03793.19 gi|73668806|ref|YP_304821.1| - 0.13 12.1 0.1 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 PASTA domain Methyltransf_11 PF08241.12 gi|73668807|ref|YP_304822.1| - 3.7e-21 75.6 0.0 7.1e-21 74.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668807|ref|YP_304822.1| - 7.5e-20 71.5 0.0 1.6e-19 70.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668807|ref|YP_304822.1| - 2.4e-18 66.4 0.0 3e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668807|ref|YP_304822.1| - 1.8e-12 47.1 0.0 3.8e-12 46.0 0.0 1.4 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|73668807|ref|YP_304822.1| - 2.1e-12 47.2 0.0 5.7e-12 45.8 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668807|ref|YP_304822.1| - 4.2e-12 46.7 0.0 9.8e-12 45.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73668807|ref|YP_304822.1| - 7.4e-05 22.4 0.0 0.00014 21.4 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|73668807|ref|YP_304822.1| - 0.00011 21.8 0.0 0.00021 20.9 0.0 1.4 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.6 gi|73668807|ref|YP_304822.1| - 0.0026 17.8 0.0 0.0042 17.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|73668807|ref|YP_304822.1| - 0.0065 16.2 0.0 0.012 15.3 0.0 1.6 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) TehB PF03848.14 gi|73668807|ref|YP_304822.1| - 0.013 15.0 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB CMAS PF02353.20 gi|73668807|ref|YP_304822.1| - 0.018 14.3 0.0 0.031 13.6 0.0 1.4 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.11 gi|73668807|ref|YP_304822.1| - 0.029 13.3 0.0 0.064 12.2 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1698) PrmA PF06325.13 gi|73668807|ref|YP_304822.1| - 0.085 12.2 0.0 0.13 11.6 0.0 1.3 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.18 gi|73668807|ref|YP_304822.1| - 0.089 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 3HCDH_N PF02737.18 gi|73668807|ref|YP_304822.1| - 0.092 12.6 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PCMT PF01135.19 gi|73668807|ref|YP_304822.1| - 0.12 12.1 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.7 gi|73668807|ref|YP_304822.1| - 0.14 12.0 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain RQC PF09382.10 gi|73668807|ref|YP_304822.1| - 0.17 11.6 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 RQC domain DREV PF05219.12 gi|73668807|ref|YP_304822.1| - 0.19 10.8 0.0 0.26 10.4 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase ABC_tran PF00005.27 gi|73668808|ref|YP_304823.1| - 9.2e-31 107.2 0.0 1.2e-30 106.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73668808|ref|YP_304823.1| - 1.8e-05 24.7 5.0 0.034 14.0 0.1 2.7 1 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668808|ref|YP_304823.1| - 0.001 18.6 0.0 0.0019 17.7 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73668808|ref|YP_304823.1| - 0.035 13.8 0.3 0.065 13.0 0.3 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|73668808|ref|YP_304823.1| - 0.045 14.2 0.1 1 9.8 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.6 gi|73668808|ref|YP_304823.1| - 0.063 11.9 0.0 2.7 6.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|73668808|ref|YP_304823.1| - 0.13 12.5 2.5 1.1 9.5 2.5 2.1 1 1 0 1 1 1 0 AAA domain RecA PF00154.21 gi|73668808|ref|YP_304823.1| - 0.15 11.5 0.9 2.1 7.8 0.1 2.6 3 0 0 3 3 3 0 recA bacterial DNA recombination protein AAA_23 PF13476.6 gi|73668808|ref|YP_304823.1| - 0.28 11.7 2.3 0.24 11.9 0.6 1.7 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|73668809|ref|YP_304824.1| - 2.4e-19 70.2 0.0 3.8e-19 69.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|73668809|ref|YP_304824.1| - 1.1e-14 54.6 0.1 2.4e-14 53.6 0.1 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|73668809|ref|YP_304824.1| - 3.6e-05 23.7 0.5 0.0045 16.8 0.0 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|73668809|ref|YP_304824.1| - 0.033 14.6 0.1 0.069 13.5 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|73668809|ref|YP_304824.1| - 0.038 14.3 0.1 0.21 11.8 0.1 2.1 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|73668809|ref|YP_304824.1| - 0.046 13.5 0.0 7.2 6.3 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_29 PF13555.6 gi|73668809|ref|YP_304824.1| - 0.049 13.4 0.1 0.1 12.4 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATP-synt_ab PF00006.25 gi|73668809|ref|YP_304824.1| - 0.095 12.3 0.0 0.11 12.1 0.0 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_7 PF12775.7 gi|73668809|ref|YP_304824.1| - 0.14 11.7 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region BPD_transp_1 PF00528.22 gi|73668810|ref|YP_304825.1| - 1.6e-27 96.4 10.9 1.8e-27 96.3 10.1 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|73668810|ref|YP_304825.1| - 6.4e-05 22.8 0.2 6.4e-05 22.8 0.2 3.4 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|73668811|ref|YP_304826.1| - 1.4e-44 152.1 9.8 1.4e-44 152.1 9.8 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|73668812|ref|YP_304827.1| - 2.7e-88 296.5 3.1 3.3e-88 296.2 3.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TOM6p PF15184.6 gi|73668812|ref|YP_304827.1| - 0.11 12.2 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Mitochondrial import receptor subunit TOM6 homolog Methyltransf_11 PF08241.12 gi|73668813|ref|YP_304828.1| - 3.7e-24 85.2 0.0 2.9e-23 82.3 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668813|ref|YP_304828.1| - 3.7e-23 82.0 0.0 4.4e-22 78.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668813|ref|YP_304828.1| - 1.9e-21 76.5 0.0 2.4e-21 76.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73668813|ref|YP_304828.1| - 5.5e-17 62.1 0.0 8.8e-17 61.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668813|ref|YP_304828.1| - 1.8e-13 51.1 0.0 3.3e-13 50.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668813|ref|YP_304828.1| - 1.3e-12 47.6 0.0 2e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|73668813|ref|YP_304828.1| - 7.8e-09 35.3 0.0 1.6e-08 34.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_9 PF08003.11 gi|73668813|ref|YP_304828.1| - 1.1e-05 24.6 0.0 2.2e-05 23.5 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1698) Methyltransf_32 PF13679.6 gi|73668813|ref|YP_304828.1| - 5.4e-05 23.2 0.0 8.8e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|73668813|ref|YP_304828.1| - 6.7e-05 22.6 0.0 0.00011 21.8 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.19 gi|73668813|ref|YP_304828.1| - 9.6e-05 22.2 0.0 0.00013 21.8 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TehB PF03848.14 gi|73668813|ref|YP_304828.1| - 0.00015 21.2 0.0 0.00023 20.6 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB CMAS PF02353.20 gi|73668813|ref|YP_304828.1| - 0.00019 20.8 0.0 0.00045 19.6 0.0 1.7 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|73668813|ref|YP_304828.1| - 0.00067 19.1 0.0 0.0011 18.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 gi|73668813|ref|YP_304828.1| - 0.0015 18.1 0.0 0.0022 17.6 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Mur_ligase PF01225.25 gi|73668813|ref|YP_304828.1| - 0.0044 17.3 0.0 0.0084 16.4 0.0 1.5 1 0 0 1 1 1 1 Mur ligase family, catalytic domain TPMT PF05724.11 gi|73668813|ref|YP_304828.1| - 0.012 15.3 0.0 0.02 14.6 0.0 1.5 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) NodS PF05401.11 gi|73668813|ref|YP_304828.1| - 0.014 15.0 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) DREV PF05219.12 gi|73668813|ref|YP_304828.1| - 0.046 12.8 0.0 0.069 12.2 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase RrnaAD PF00398.20 gi|73668813|ref|YP_304828.1| - 0.048 12.7 0.0 0.073 12.1 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_18 PF12847.7 gi|73668813|ref|YP_304828.1| - 0.08 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain AdoMet_MTase PF07757.13 gi|73668813|ref|YP_304828.1| - 0.081 13.3 0.1 0.23 11.8 0.1 1.7 1 1 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase CheR PF01739.18 gi|73668813|ref|YP_304828.1| - 0.1 12.1 0.0 1.3 8.5 0.0 2.2 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain GidB PF02527.15 gi|73668813|ref|YP_304828.1| - 0.17 11.2 0.0 0.32 10.3 0.0 1.4 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Peripla_BP_2 PF01497.18 gi|73668814|ref|YP_304829.1| - 6.6e-23 81.5 0.0 8.5e-23 81.1 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein FmdE PF02663.14 gi|73668815|ref|YP_304830.1| - 1.7e-27 96.0 0.0 2.4e-27 95.5 0.0 1.2 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Arc_trans_TRASH PF08394.10 gi|73668815|ref|YP_304830.1| - 0.016 15.6 0.6 2.2 8.7 0.3 2.8 3 0 0 3 3 3 0 Archaeal TRASH domain Fer4 PF00037.27 gi|73668816|ref|YP_304831.1| - 1.5e-54 179.7 88.4 6.3e-08 32.1 2.5 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73668816|ref|YP_304831.1| - 1.5e-45 153.6 126.3 1.8e-09 38.0 15.2 5.8 2 1 5 7 7 7 7 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73668816|ref|YP_304831.1| - 6.3e-33 113.5 58.4 3.3e-09 37.5 8.2 7.3 7 0 0 7 7 7 7 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|73668816|ref|YP_304831.1| - 1.7e-32 110.1 88.3 3.6e-06 26.8 2.7 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73668816|ref|YP_304831.1| - 3.5e-29 100.7 71.3 3.1e-08 33.6 13.3 7.2 5 2 2 7 7 7 7 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73668816|ref|YP_304831.1| - 3.2e-28 97.6 72.2 8.8e-08 32.2 7.7 6.2 3 2 2 5 5 5 5 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73668816|ref|YP_304831.1| - 6e-28 96.8 68.2 2.3e-08 34.0 11.8 6.4 4 2 3 7 7 7 7 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73668816|ref|YP_304831.1| - 4.7e-23 79.8 79.9 6.3e-06 26.0 1.8 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73668816|ref|YP_304831.1| - 8.2e-19 67.8 61.6 3.4e-07 30.6 6.4 6.2 3 2 4 7 7 7 7 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73668816|ref|YP_304831.1| - 1.5e-18 67.1 56.7 4.6e-06 27.1 10.3 6.1 4 1 2 6 6 6 6 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73668816|ref|YP_304831.1| - 3.6e-17 61.4 75.2 0.00022 21.5 3.2 8.4 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_3 PF12798.7 gi|73668816|ref|YP_304831.1| - 1.6e-13 50.6 106.3 0.0018 19.1 6.0 8.5 8 0 0 8 8 8 6 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73668816|ref|YP_304831.1| - 7.5e-06 26.4 82.0 0.075 13.6 3.1 8.4 7 1 0 7 7 7 6 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|73668816|ref|YP_304831.1| - 9.4e-06 26.4 67.6 0.029 15.2 0.5 8.0 4 2 6 10 10 10 5 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73668816|ref|YP_304831.1| - 1.8e-05 24.9 67.0 0.065 13.4 0.2 7.9 2 1 5 8 8 8 6 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73668816|ref|YP_304831.1| - 0.0028 18.4 70.9 0.31 11.8 1.0 9.0 7 3 0 7 7 6 5 4Fe-4S single cluster domain ETF_QO PF05187.13 gi|73668816|ref|YP_304831.1| - 0.69 10.1 37.2 1.7 8.8 2.8 5.4 3 2 2 5 5 5 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Amidohydro_3 PF07969.11 gi|73668817|ref|YP_304832.1| - 1.2e-108 364.6 0.0 1.4e-108 364.4 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|73668817|ref|YP_304832.1| - 5.9e-07 29.1 0.2 0.003 16.9 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase family GXGXG PF01493.19 gi|73668818|ref|YP_304833.1| - 8.9e-09 35.2 19.5 1.8e-08 34.2 18.7 2.3 1 1 0 1 1 1 1 GXGXG motif Molydop_binding PF01568.21 gi|73668819|ref|YP_304834.1| - 2e-09 37.4 0.0 2.4e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdopterin PF00384.22 gi|73668820|ref|YP_304835.1| - 3e-18 66.0 0.0 9.5e-18 64.4 0.0 1.7 1 1 0 1 1 1 1 Molybdopterin oxidoreductase TPP_enzyme_M PF00205.22 gi|73668820|ref|YP_304835.1| - 0.017 14.8 0.0 0.048 13.4 0.0 1.8 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain SIMPL PF04402.14 gi|73668821|ref|YP_304836.1| - 3.8e-49 167.9 13.6 4.5e-49 167.6 13.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) YbaB_DNA_bd PF02575.16 gi|73668821|ref|YP_304836.1| - 0.033 14.4 4.0 0.059 13.6 0.9 2.6 2 1 0 2 2 2 0 YbaB/EbfC DNA-binding family RcpB PF16971.5 gi|73668821|ref|YP_304836.1| - 0.14 12.1 5.2 0.064 13.2 2.1 2.0 2 0 0 2 2 2 0 Rough colony protein B, tight adherence - tad - subunit Aminotran_5 PF00266.19 gi|73668822|ref|YP_304837.1| - 9.1e-06 24.9 0.0 1.1e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V HNH_3 PF13392.6 gi|73668822|ref|YP_304837.1| - 0.023 14.4 0.0 0.061 13.1 0.0 1.7 1 0 0 1 1 1 0 HNH endonuclease Formyl_trans_N PF00551.19 gi|73668823|ref|YP_304838.1| - 5.7e-50 169.6 0.0 6.6e-50 169.4 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase ubiquitin PF00240.23 gi|73668823|ref|YP_304838.1| - 0.028 14.2 0.3 0.097 12.4 0.1 2.0 2 1 0 2 2 2 0 Ubiquitin family Methyltransf_25 PF13649.6 gi|73668824|ref|YP_304839.1| - 4.2e-16 59.4 0.0 7e-16 58.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668824|ref|YP_304839.1| - 1.4e-14 54.6 0.0 2.2e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73668824|ref|YP_304839.1| - 1.1e-13 51.7 0.0 1.7e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73668824|ref|YP_304839.1| - 2e-13 50.4 0.1 3.4e-13 49.7 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|73668824|ref|YP_304839.1| - 1.9e-11 43.8 0.0 2.8e-11 43.2 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|73668824|ref|YP_304839.1| - 1.1e-10 41.6 0.0 2.1e-10 40.7 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668824|ref|YP_304839.1| - 1.2e-06 28.0 0.0 1.7e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|73668824|ref|YP_304839.1| - 4e-05 23.2 0.0 8e-05 22.3 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 gi|73668824|ref|YP_304839.1| - 6e-05 22.6 0.0 0.00011 21.8 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase NodS PF05401.11 gi|73668824|ref|YP_304839.1| - 0.00015 21.4 0.0 0.00023 20.8 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) PCMT PF01135.19 gi|73668824|ref|YP_304839.1| - 0.00016 21.5 0.0 0.00023 21.0 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TehB PF03848.14 gi|73668824|ref|YP_304839.1| - 0.0033 16.8 0.0 0.0053 16.2 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_18 PF12847.7 gi|73668824|ref|YP_304839.1| - 0.027 14.4 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|73668824|ref|YP_304839.1| - 0.027 13.9 0.0 0.04 13.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) tRNA_U5-meth_tr PF05958.11 gi|73668824|ref|YP_304839.1| - 0.042 12.8 0.0 0.061 12.3 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Pox_MCEL PF03291.16 gi|73668824|ref|YP_304839.1| - 0.068 12.3 1.5 1.1 8.2 0.1 2.5 2 1 0 2 2 2 0 mRNA capping enzyme TPMT PF05724.11 gi|73668824|ref|YP_304839.1| - 0.098 12.3 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_32 PF13679.6 gi|73668824|ref|YP_304839.1| - 0.22 11.5 0.0 0.33 10.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Cyt-b5 PF00173.28 gi|73668825|ref|YP_304840.1| - 1.3e-08 34.9 0.1 2.8e-08 33.8 0.1 1.6 2 0 0 2 2 2 1 Cytochrome b5-like Heme/Steroid binding domain DUF190 PF02641.15 gi|73668827|ref|YP_304842.1| - 3.9e-32 110.4 0.3 4.3e-32 110.3 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1993 DnaI_N PF07319.11 gi|73668828|ref|YP_304843.1| - 0.037 14.7 0.1 0.32 11.7 0.0 2.4 3 0 0 3 3 3 0 Primosomal protein DnaI N-terminus DUF1129 PF06570.11 gi|73668829|ref|YP_304844.1| - 0.047 13.2 3.8 0.079 12.4 3.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DDE_Tnp_1_2 PF13586.6 gi|73668830|ref|YP_304845.1| - 6.1e-13 49.0 1.7 6.7e-13 48.8 1.7 1.0 1 0 0 1 1 1 1 Transposase DDE domain RGS12_us1 PF16613.5 gi|73668830|ref|YP_304845.1| - 0.14 12.5 1.7 0.17 12.2 1.7 1.1 1 0 0 1 1 1 0 Unstructured region of RGS12 DDE_Tnp_1 PF01609.21 gi|73668830|ref|YP_304845.1| - 1.3 8.7 4.8 1.5 8.4 4.8 1.3 1 1 0 1 1 1 0 Transposase DDE domain DUF364 PF04016.12 gi|73668831|ref|YP_304846.1| - 1.4e-40 138.2 0.0 2.5e-40 137.5 0.0 1.3 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF4213 PF13938.6 gi|73668831|ref|YP_304846.1| - 9.8e-21 73.8 0.0 1.6e-20 73.1 0.0 1.3 1 0 0 1 1 1 1 Putative heavy-metal chelation QRPTase_C PF01729.19 gi|73668832|ref|YP_304847.1| - 8.3e-23 81.0 0.0 1.5e-22 80.2 0.0 1.4 1 1 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|73668832|ref|YP_304847.1| - 4.8e-13 49.0 0.0 9.4e-13 48.0 0.0 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain DUF5380 PF17351.2 gi|73668832|ref|YP_304847.1| - 0.077 12.9 0.0 0.21 11.5 0.0 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5380) ABC_tran PF00005.27 gi|73668833|ref|YP_304848.1| - 1.9e-31 109.4 0.0 3.3e-31 108.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 gi|73668833|ref|YP_304848.1| - 1e-14 54.6 0.1 1.7e-12 47.5 0.0 3.2 2 1 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 gi|73668833|ref|YP_304848.1| - 1.3e-08 35.0 0.1 0.0032 17.3 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73668833|ref|YP_304848.1| - 2.2e-05 24.0 0.2 0.00059 19.3 0.1 2.5 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|73668833|ref|YP_304848.1| - 0.0015 18.7 0.1 0.027 14.7 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 gi|73668833|ref|YP_304848.1| - 0.011 16.0 0.1 0.03 14.6 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|73668833|ref|YP_304848.1| - 0.019 14.7 0.0 0.038 13.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain TOBE_2 PF08402.10 gi|73668833|ref|YP_304848.1| - 0.023 14.9 0.0 0.091 12.9 0.0 2.0 1 1 1 2 2 2 0 TOBE domain T2SSE PF00437.20 gi|73668833|ref|YP_304848.1| - 0.024 13.7 0.0 0.052 12.6 0.0 1.6 1 0 0 1 1 1 0 Type II/IV secretion system protein Mg_chelatase PF01078.21 gi|73668833|ref|YP_304848.1| - 0.029 13.7 0.0 0.061 12.7 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|73668833|ref|YP_304848.1| - 0.14 12.5 0.1 0.27 11.6 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain BPD_transp_1 PF00528.22 gi|73668834|ref|YP_304849.1| - 5.3e-17 62.2 15.2 5.3e-17 62.2 15.2 1.8 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.6 gi|73668835|ref|YP_304850.1| - 1.3e-45 155.9 0.0 1.5e-45 155.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Phosphonate-bd PF12974.7 gi|73668835|ref|YP_304850.1| - 8.7e-06 25.5 0.0 2.2e-05 24.2 0.0 1.7 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 gi|73668835|ref|YP_304850.1| - 0.00039 19.9 0.0 0.00065 19.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 SBP_bac_8 PF13416.6 gi|73668835|ref|YP_304850.1| - 0.0074 16.1 0.3 0.012 15.4 0.2 1.5 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein ox_reductase_C PF08635.10 gi|73668835|ref|YP_304850.1| - 0.064 12.9 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain Flavodoxin_2 PF02525.17 gi|73668836|ref|YP_304851.1| - 8.6e-56 188.8 0.0 9.5e-56 188.7 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 gi|73668836|ref|YP_304851.1| - 5.4e-16 58.7 0.0 2e-15 56.9 0.0 1.9 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Dynein_light PF01221.18 gi|73668836|ref|YP_304851.1| - 0.13 12.6 0.0 0.25 11.7 0.0 1.5 1 0 0 1 1 1 0 Dynein light chain type 1 IGPD PF00475.18 gi|73668838|ref|YP_304853.1| - 1.6e-62 210.1 2.0 2e-62 209.8 2.0 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase His_biosynth PF00977.21 gi|73668839|ref|YP_304854.1| - 3e-79 265.7 0.5 3.4e-79 265.5 0.5 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|73668839|ref|YP_304854.1| - 1.1e-10 41.1 0.0 0.00014 21.1 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) DHO_dh PF01180.21 gi|73668839|ref|YP_304854.1| - 5.2e-09 35.7 0.2 6.4e-05 22.3 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase NMO PF03060.15 gi|73668839|ref|YP_304854.1| - 3e-08 33.4 1.7 3.4e-06 26.7 0.2 2.1 1 1 1 2 2 2 2 Nitronate monooxygenase IMPDH PF00478.25 gi|73668839|ref|YP_304854.1| - 3.6e-06 26.2 0.3 0.039 12.9 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain ThiG PF05690.14 gi|73668839|ref|YP_304854.1| - 5.2e-06 26.0 0.7 0.073 12.4 0.1 2.6 2 1 1 3 3 3 3 Thiazole biosynthesis protein ThiG NanE PF04131.14 gi|73668839|ref|YP_304854.1| - 6e-06 25.6 0.1 0.031 13.5 0.0 2.2 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase TMP-TENI PF02581.17 gi|73668839|ref|YP_304854.1| - 1.8e-05 24.1 1.1 0.00032 20.1 0.0 2.5 2 1 0 2 2 2 1 Thiamine monophosphate synthase IGPS PF00218.21 gi|73668839|ref|YP_304854.1| - 6.9e-05 22.1 0.2 0.0041 16.3 0.0 2.3 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase FMN_dh PF01070.18 gi|73668839|ref|YP_304854.1| - 9.7e-05 21.5 0.1 0.048 12.7 0.0 2.2 2 0 0 2 2 2 2 FMN-dependent dehydrogenase PcrB PF01884.17 gi|73668839|ref|YP_304854.1| - 0.00082 18.9 0.2 0.033 13.7 0.1 2.1 2 0 0 2 2 2 1 PcrB family G3P_antiterm PF04309.12 gi|73668839|ref|YP_304854.1| - 0.0022 17.5 1.0 0.064 12.7 0.1 2.2 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator Trp_syntA PF00290.20 gi|73668839|ref|YP_304854.1| - 0.0045 15.9 1.3 0.11 11.3 0.1 2.1 2 0 0 2 2 2 1 Tryptophan synthase alpha chain DUF561 PF04481.12 gi|73668839|ref|YP_304854.1| - 0.0055 15.9 0.2 0.011 14.9 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF561) Toprim_3 PF13362.6 gi|73668839|ref|YP_304854.1| - 0.031 14.6 0.1 1 9.8 0.0 2.6 3 0 0 3 3 3 0 Toprim domain DNA_pol_lambd_f PF10391.9 gi|73668839|ref|YP_304854.1| - 0.098 12.5 0.0 29 4.6 0.0 3.2 3 0 0 3 3 3 0 Fingers domain of DNA polymerase lambda HisG PF01634.18 gi|73668840|ref|YP_304855.1| - 8.2e-53 178.6 0.4 1.2e-52 178.1 0.4 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|73668840|ref|YP_304855.1| - 7.9e-26 90.0 0.3 1.8e-25 88.9 0.3 1.6 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.11 gi|73668840|ref|YP_304855.1| - 2e-06 27.9 0.1 0.00069 19.6 0.1 2.3 1 1 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.20 gi|73668840|ref|YP_304855.1| - 0.00098 18.6 0.1 0.0013 18.2 0.1 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 gi|73668840|ref|YP_304855.1| - 0.072 12.7 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein AdoMet_Synthase PF01941.19 gi|73668841|ref|YP_304856.1| - 7.2e-179 594.7 0.7 8.2e-179 594.5 0.7 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) Peptidase_M24 PF00557.24 gi|73668843|ref|YP_304858.1| - 1.9e-46 158.4 0.8 2.5e-46 158.0 0.8 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Endonuc-BglII PF09195.11 gi|73668843|ref|YP_304858.1| - 0.11 12.3 0.0 0.39 10.6 0.0 1.8 2 0 0 2 2 2 0 Restriction endonuclease BglII Peptidase_M24 PF00557.24 gi|73668844|ref|YP_304859.1| - 1.1e-41 142.8 0.0 1.3e-41 142.6 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF1805 PF08827.11 gi|73668846|ref|YP_304861.1| - 1.1e-26 92.9 0.9 1.5e-26 92.5 0.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1805) SCF PF02404.15 gi|73668847|ref|YP_304862.1| - 0.0039 16.6 0.1 0.0039 16.6 0.1 1.0 1 0 0 1 1 1 1 Stem cell factor Colicin_V PF02674.16 gi|73668849|ref|YP_304864.1| - 0.021 14.8 0.3 0.031 14.3 0.3 1.3 1 0 0 1 1 1 0 Colicin V production protein SK_channel PF03530.14 gi|73668849|ref|YP_304864.1| - 0.11 12.5 0.8 0.17 11.9 0.8 1.3 1 0 0 1 1 1 0 Calcium-activated SK potassium channel EamA PF00892.20 gi|73668850|ref|YP_304865.1| - 1.1e-25 90.3 34.3 2.5e-14 53.6 14.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|73668850|ref|YP_304865.1| - 1.4e-05 24.6 21.1 0.00012 21.6 5.4 2.3 2 0 0 2 2 2 2 Triose-phosphate Transporter family Sugar_transport PF06800.12 gi|73668850|ref|YP_304865.1| - 0.00015 21.2 11.9 0.00018 20.9 11.9 1.2 1 0 0 1 1 1 1 Sugar transport protein TMEM234 PF10639.9 gi|73668850|ref|YP_304865.1| - 0.00034 20.6 0.7 0.00034 20.6 0.7 3.1 2 1 0 2 2 2 1 Putative transmembrane family 234 DDE_Tnp_IS1 PF03400.13 gi|73668851|ref|YP_304866.1| - 6.4e-09 36.2 0.1 7e-09 36.1 0.1 1.0 1 0 0 1 1 1 1 IS1 transposase HTH_23 PF13384.6 gi|73668852|ref|YP_304867.1| - 1.5e-06 27.8 0.0 2.8e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.12 gi|73668852|ref|YP_304867.1| - 1.9e-06 27.7 0.0 2.9e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_28 PF13518.6 gi|73668852|ref|YP_304867.1| - 0.00012 22.1 0.0 0.00019 21.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|73668852|ref|YP_304867.1| - 0.0017 18.0 0.0 0.0042 16.8 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain TnsD PF15978.5 gi|73668852|ref|YP_304867.1| - 0.0045 16.0 0.2 0.0074 15.3 0.2 1.4 1 1 0 1 1 1 1 Tn7-like transposition protein D Sigma70_r4_2 PF08281.12 gi|73668852|ref|YP_304867.1| - 0.0052 16.4 0.0 0.0094 15.6 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_29 PF13551.6 gi|73668852|ref|YP_304867.1| - 0.01 15.8 0.0 0.019 15.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Zn-ribbon_8 PF09723.10 gi|73668852|ref|YP_304867.1| - 0.022 14.9 2.8 0.67 10.1 0.1 2.4 2 0 0 2 2 2 0 Zinc ribbon domain Zn_Tnp_IS1 PF03811.13 gi|73668852|ref|YP_304867.1| - 0.026 14.3 8.6 0.043 13.5 8.6 1.4 1 0 0 1 1 1 0 InsA N-terminal domain HTH_Tnp_1 PF01527.20 gi|73668852|ref|YP_304867.1| - 0.037 14.3 0.0 0.067 13.5 0.0 1.5 1 1 0 1 1 1 0 Transposase zf-Mss51 PF13824.6 gi|73668852|ref|YP_304867.1| - 0.055 13.6 3.6 0.13 12.4 3.6 1.7 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF1670 PF07900.11 gi|73668852|ref|YP_304867.1| - 0.061 12.7 0.0 0.07 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) Zn_Tnp_IS1595 PF12760.7 gi|73668852|ref|YP_304867.1| - 0.14 12.1 6.8 0.23 11.5 6.8 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zinc-ribbons_6 PF07191.12 gi|73668852|ref|YP_304867.1| - 0.29 11.2 3.7 0.29 11.1 2.6 1.5 2 0 0 2 2 2 0 zinc-ribbons Rubredoxin PF00301.20 gi|73668852|ref|YP_304867.1| - 0.66 10.0 3.9 1 9.4 0.5 2.2 2 0 0 2 2 2 0 Rubredoxin zf-ACC PF17848.1 gi|73668852|ref|YP_304867.1| - 0.67 10.1 3.8 0.75 9.9 0.5 2.5 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain OrfB_Zn_ribbon PF07282.11 gi|73668852|ref|YP_304867.1| - 0.93 9.5 6.8 2.9 7.9 4.3 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain UPF0547 PF10571.9 gi|73668852|ref|YP_304867.1| - 5.2 7.3 6.2 7.3 6.8 0.6 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Radical_SAM PF04055.21 gi|73668853|ref|YP_304868.1| - 7.4e-08 32.9 0.0 1.3e-07 32.2 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|73668853|ref|YP_304868.1| - 8.4e-05 23.0 2.5 0.00014 22.3 0.6 2.4 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain DUF2358 PF10184.9 gi|73668853|ref|YP_304868.1| - 0.081 13.2 0.4 0.22 11.8 0.4 1.7 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2358) Glycos_transf_2 PF00535.26 gi|73668854|ref|YP_304869.1| - 1.2e-29 103.3 0.0 1.9e-29 102.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|73668854|ref|YP_304869.1| - 1.4e-16 60.8 0.0 2.4e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|73668854|ref|YP_304869.1| - 3.8e-13 49.9 0.0 5.3e-13 49.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|73668854|ref|YP_304869.1| - 0.13 12.7 0.1 0.3 11.6 0.1 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 2 DDE_Tnp_IS1 PF03400.13 gi|73668855|ref|YP_304870.1| - 6.4e-09 36.2 0.1 7e-09 36.1 0.1 1.0 1 0 0 1 1 1 1 IS1 transposase HTH_23 PF13384.6 gi|73668856|ref|YP_304871.1| - 1.6e-06 27.7 0.0 2.8e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.12 gi|73668856|ref|YP_304871.1| - 2e-06 27.6 0.0 2.9e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_28 PF13518.6 gi|73668856|ref|YP_304871.1| - 0.00013 22.1 0.0 0.00019 21.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|73668856|ref|YP_304871.1| - 0.0018 18.0 0.0 0.0042 16.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|73668856|ref|YP_304871.1| - 0.0052 16.4 0.0 0.0094 15.6 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_29 PF13551.6 gi|73668856|ref|YP_304871.1| - 0.011 15.8 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix TnsD PF15978.5 gi|73668856|ref|YP_304871.1| - 0.013 14.5 0.1 0.019 13.9 0.1 1.4 1 1 0 1 1 1 0 Tn7-like transposition protein D Zn-ribbon_8 PF09723.10 gi|73668856|ref|YP_304871.1| - 0.016 15.3 2.8 0.44 10.7 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|73668856|ref|YP_304871.1| - 0.027 14.4 1.5 0.035 14.1 0.9 1.5 2 0 0 2 2 2 0 zinc-ribbons HTH_Tnp_1 PF01527.20 gi|73668856|ref|YP_304871.1| - 0.044 14.1 0.0 0.072 13.4 0.0 1.3 1 0 0 1 1 1 0 Transposase Zn_Tnp_IS1595 PF12760.7 gi|73668856|ref|YP_304871.1| - 0.045 13.7 3.5 0.072 13.1 3.5 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DUF1670 PF07900.11 gi|73668856|ref|YP_304871.1| - 0.076 12.3 0.0 0.093 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) Lar_restr_allev PF14354.6 gi|73668856|ref|YP_304871.1| - 0.11 12.9 0.4 0.19 12.2 0.4 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-Mss51 PF13824.6 gi|73668856|ref|YP_304871.1| - 0.44 10.7 4.0 1.7 8.8 4.0 1.9 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Zn_Tnp_IS1 PF03811.13 gi|73668856|ref|YP_304871.1| - 0.6 9.9 5.5 1.2 8.9 5.5 1.6 1 0 0 1 1 1 0 InsA N-terminal domain zf-ACC PF17848.1 gi|73668856|ref|YP_304871.1| - 0.75 9.9 3.8 0.75 9.9 0.5 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain OrfB_Zn_ribbon PF07282.11 gi|73668856|ref|YP_304871.1| - 1.5 8.8 4.4 6 6.9 2.1 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain UPF0020 PF01170.18 gi|73668857|ref|YP_304872.1| - 4.6e-29 101.5 0.0 1.6e-28 99.7 0.0 1.8 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|73668857|ref|YP_304872.1| - 3.9e-13 49.7 0.3 2.3e-12 47.2 0.3 2.0 2 0 0 2 2 2 1 THUMP domain Methyltransf_31 PF13847.6 gi|73668857|ref|YP_304872.1| - 4.6e-09 36.2 0.0 6.9e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|73668857|ref|YP_304872.1| - 2.3e-08 34.1 0.0 0.0016 18.2 0.0 2.3 2 0 0 2 2 2 2 DNA methylase Methyltransf_25 PF13649.6 gi|73668857|ref|YP_304872.1| - 4.7e-08 33.6 0.0 1.7e-07 31.9 0.0 2.0 2 1 0 2 2 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73668857|ref|YP_304872.1| - 7e-08 33.0 0.0 3.8e-07 30.7 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|73668857|ref|YP_304872.1| - 1.5e-06 28.0 0.0 2.2e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 AviRa PF11599.8 gi|73668857|ref|YP_304872.1| - 1.9e-05 24.3 0.0 0.006 16.1 0.0 2.2 1 1 1 2 2 2 2 RRNA methyltransferase AviRa Methyltransf_15 PF09445.10 gi|73668857|ref|YP_304872.1| - 0.00051 19.7 0.0 0.00098 18.7 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.14 gi|73668857|ref|YP_304872.1| - 0.0021 17.6 0.0 0.0036 16.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain N6_Mtase PF02384.16 gi|73668857|ref|YP_304872.1| - 0.0051 16.1 0.0 0.01 15.2 0.0 1.4 1 0 0 1 1 1 1 N-6 DNA Methylase Ubie_methyltran PF01209.18 gi|73668857|ref|YP_304872.1| - 0.0053 16.1 0.0 0.02 14.3 0.0 1.8 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrpR_N PF06506.11 gi|73668857|ref|YP_304872.1| - 0.11 12.1 0.0 0.26 10.8 0.0 1.6 1 0 0 1 1 1 0 Propionate catabolism activator PseudoU_synth_1 PF01416.20 gi|73668859|ref|YP_304874.1| - 2.9e-28 98.5 0.0 3.6e-23 82.1 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase HTH_20 PF12840.7 gi|73668860|ref|YP_304875.1| - 1.4e-08 34.7 0.0 2.7e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|73668860|ref|YP_304875.1| - 6.4e-06 25.6 0.5 1.1e-05 24.9 0.5 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF742 PF05331.11 gi|73668860|ref|YP_304875.1| - 0.0003 20.6 0.0 0.00053 19.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF742) HTH_5 PF01022.20 gi|73668860|ref|YP_304875.1| - 0.00086 19.1 0.2 0.0017 18.2 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|73668860|ref|YP_304875.1| - 0.0017 18.2 0.2 0.0032 17.3 0.2 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|73668860|ref|YP_304875.1| - 0.035 14.0 0.7 0.056 13.3 0.7 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_IclR PF09339.10 gi|73668860|ref|YP_304875.1| - 0.081 12.7 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_40 PF14493.6 gi|73668860|ref|YP_304875.1| - 0.086 13.3 0.2 0.15 12.5 0.2 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|73668860|ref|YP_304875.1| - 0.16 12.0 1.3 0.3 11.1 1.3 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DUF1297 PF06973.12 gi|73668861|ref|YP_304876.1| - 1.2e-55 188.0 0.1 1.6e-55 187.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|73668861|ref|YP_304876.1| - 3.3e-44 149.8 0.0 6.7e-44 148.8 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1246) CPSase_L_D2 PF02786.17 gi|73668861|ref|YP_304876.1| - 0.0023 17.5 0.0 0.0041 16.6 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|73668861|ref|YP_304876.1| - 0.0065 16.5 0.0 0.02 14.9 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 gi|73668861|ref|YP_304876.1| - 0.039 13.5 0.0 0.087 12.4 0.0 1.5 1 0 0 1 1 1 0 RimK-like ATP-grasp domain Radical_SAM PF04055.21 gi|73668862|ref|YP_304877.1| - 4.5e-19 69.4 0.0 7e-19 68.8 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|73668862|ref|YP_304877.1| - 4.7e-09 36.6 0.6 1.4e-08 35.1 0.6 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|73668862|ref|YP_304877.1| - 4.3e-06 27.0 0.0 7.5e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73668862|ref|YP_304877.1| - 3.5e-05 23.9 0.0 0.00014 22.0 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain CCDC84 PF14968.6 gi|73668863|ref|YP_304878.1| - 0.0013 18.4 0.1 0.21 11.2 0.0 2.0 1 1 1 2 2 2 2 Coiled coil protein 84 CheR PF01739.18 gi|73668863|ref|YP_304878.1| - 0.064 12.7 0.1 0.63 9.5 0.0 2.0 2 0 0 2 2 2 0 CheR methyltransferase, SAM binding domain ADD_DNMT3 PF17980.1 gi|73668863|ref|YP_304878.1| - 0.13 12.3 0.6 1.8 8.6 0.0 2.2 2 0 0 2 2 2 0 Cysteine rich ADD domain in DNMT3 DUF87 PF01935.17 gi|73668864|ref|YP_304879.1| - 1.2e-10 41.9 0.0 2e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 gi|73668864|ref|YP_304879.1| - 4.8e-05 22.8 0.0 0.092 12.1 0.0 2.2 2 0 0 2 2 2 2 FtsK/SpoIIIE family DUF853 PF05872.12 gi|73668864|ref|YP_304879.1| - 0.0052 15.4 0.0 0.011 14.3 0.0 1.5 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) AAA_10 PF12846.7 gi|73668864|ref|YP_304879.1| - 0.0066 15.4 0.0 1.7 7.5 0.0 2.2 2 0 0 2 2 2 2 AAA-like domain Zot PF05707.12 gi|73668864|ref|YP_304879.1| - 0.037 13.7 0.0 0.078 12.6 0.0 1.5 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) AAA PF00004.29 gi|73668864|ref|YP_304879.1| - 0.048 14.1 0.0 2.3 8.7 0.0 2.4 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|73668864|ref|YP_304879.1| - 0.05 13.9 0.0 1.2 9.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain Aconitase_C PF00694.19 gi|73668865|ref|YP_304880.1| - 8.3e-19 68.2 0.0 1.2e-18 67.7 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|73668865|ref|YP_304880.1| - 0.006 16.2 0.1 0.1 12.2 0.1 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Iso_dh PF00180.20 gi|73668866|ref|YP_304881.1| - 7.2e-93 311.5 0.0 8.2e-93 311.3 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DUF2213 PF09979.9 gi|73668866|ref|YP_304881.1| - 0.15 12.0 0.1 0.28 11.1 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2213) ABC_tran PF00005.27 gi|73668867|ref|YP_304882.1| - 2.6e-23 83.1 0.0 3.7e-23 82.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|73668867|ref|YP_304882.1| - 0.00045 20.5 0.1 0.0011 19.3 0.1 1.6 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|73668867|ref|YP_304882.1| - 0.0014 18.6 0.5 0.005 16.8 0.2 1.8 2 0 0 2 2 2 1 RsgA GTPase AAA_21 PF13304.6 gi|73668867|ref|YP_304882.1| - 0.0021 17.9 1.7 0.064 13.1 0.2 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system TniB PF05621.11 gi|73668867|ref|YP_304882.1| - 0.0033 16.9 0.1 0.31 10.4 0.1 2.1 2 0 0 2 2 2 1 Bacterial TniB protein SMC_N PF02463.19 gi|73668867|ref|YP_304882.1| - 0.0064 16.0 0.7 0.2 11.1 0.0 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73668867|ref|YP_304882.1| - 0.0069 16.1 0.2 0.0069 16.1 0.2 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|73668867|ref|YP_304882.1| - 0.0083 16.7 0.0 0.015 15.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 gi|73668867|ref|YP_304882.1| - 0.016 15.0 0.7 0.025 14.3 0.1 1.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation MeaB PF03308.16 gi|73668867|ref|YP_304882.1| - 0.02 13.9 0.0 0.029 13.4 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA PF00004.29 gi|73668867|ref|YP_304882.1| - 0.045 14.2 0.1 0.11 12.9 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|73668867|ref|YP_304882.1| - 0.054 13.9 0.1 0.072 13.5 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain CLP1_P PF16575.5 gi|73668867|ref|YP_304882.1| - 0.077 12.8 0.5 0.13 12.1 0.1 1.5 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_30 PF13604.6 gi|73668867|ref|YP_304882.1| - 0.088 12.5 0.0 0.36 10.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain KAP_NTPase PF07693.14 gi|73668867|ref|YP_304882.1| - 0.093 11.9 0.0 0.094 11.9 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain AAA_23 PF13476.6 gi|73668867|ref|YP_304882.1| - 0.094 13.2 0.5 0.33 11.4 0.5 2.0 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|73668867|ref|YP_304882.1| - 0.16 11.7 0.3 1 9.0 0.1 2.0 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|73668868|ref|YP_304883.1| - 7.1e-23 81.6 0.1 1.1e-22 81.0 0.1 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|73668868|ref|YP_304883.1| - 7.7e-11 42.3 0.0 1.5e-10 41.4 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|73668868|ref|YP_304883.1| - 9.7e-06 25.9 0.0 2.1e-05 24.8 0.0 1.5 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|73668868|ref|YP_304883.1| - 0.00025 20.5 0.8 0.0018 17.7 0.2 2.1 1 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI SMC_N PF02463.19 gi|73668868|ref|YP_304883.1| - 0.00031 20.2 0.4 0.0021 17.6 0.4 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73668868|ref|YP_304883.1| - 0.0064 16.3 0.1 3.1 7.5 0.2 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|73668868|ref|YP_304883.1| - 0.012 15.4 0.1 0.022 14.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|73668868|ref|YP_304883.1| - 0.013 15.9 0.0 0.023 15.1 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|73668868|ref|YP_304883.1| - 0.028 13.6 0.3 0.13 11.4 0.0 2.1 3 0 0 3 3 3 0 NB-ARC domain RsgA_GTPase PF03193.16 gi|73668868|ref|YP_304883.1| - 0.11 12.4 0.0 0.21 11.5 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 gi|73668868|ref|YP_304883.1| - 0.13 12.7 0.1 0.53 10.7 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) T2SSE PF00437.20 gi|73668868|ref|YP_304883.1| - 0.14 11.2 0.0 0.23 10.5 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF87 PF01935.17 gi|73668868|ref|YP_304883.1| - 0.45 10.6 2.5 0.68 10.0 1.0 1.9 1 1 1 2 2 2 0 Helicase HerA, central domain BPD_transp_1 PF00528.22 gi|73668869|ref|YP_304884.1| - 2.8e-20 72.8 8.9 2.8e-20 72.8 8.9 2.1 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|73668870|ref|YP_304885.1| - 1.3e-38 132.6 11.2 1.3e-38 132.6 11.2 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|73668871|ref|YP_304886.1| - 1.9e-78 264.0 8.9 2.6e-78 263.6 8.9 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF4096 PF13340.6 gi|73668872|ref|YP_304887.1| - 8.2e-26 90.0 0.3 2.3e-25 88.6 0.3 1.8 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1 PF01609.21 gi|73668872|ref|YP_304887.1| - 1.1e-14 54.5 4.7 8.1e-14 51.8 4.7 2.0 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.6 gi|73668872|ref|YP_304887.1| - 4.4e-13 49.4 0.4 8.6e-13 48.5 0.4 1.5 1 0 0 1 1 1 1 Transposase DDE domain PRiA4_ORF3 PF07929.11 gi|73668874|ref|YP_304889.1| - 1.5e-67 226.7 0.8 1.7e-67 226.5 0.8 1.0 1 0 0 1 1 1 1 Plasmid pRiA4b ORF-3-like protein PRiA4_ORF3 PF07929.11 gi|73668876|ref|YP_304891.1| - 1e-62 210.9 0.2 1.2e-62 210.7 0.2 1.0 1 0 0 1 1 1 1 Plasmid pRiA4b ORF-3-like protein GIIM PF08388.11 gi|73668877|ref|YP_304892.1| - 0.0027 17.7 0.1 0.0048 16.9 0.1 1.4 1 0 0 1 1 1 1 Group II intron, maturase-specific domain RVT_1 PF00078.27 gi|73668877|ref|YP_304892.1| - 0.018 14.6 0.0 0.039 13.5 0.0 1.6 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Lipoprotein_2 PF00921.17 gi|73668877|ref|YP_304892.1| - 0.042 13.4 0.3 0.054 13.1 0.3 1.1 1 0 0 1 1 1 0 Borrelia lipoprotein Cas6b_C PF17262.2 gi|73668878|ref|YP_304893.1| - 3e-40 136.9 0.1 5.1e-40 136.1 0.1 1.4 1 0 0 1 1 1 1 Cas6b C-terminal domain Cas6b_N PF17955.1 gi|73668878|ref|YP_304893.1| - 1.4e-33 115.0 0.0 2.4e-33 114.3 0.0 1.4 1 0 0 1 1 1 1 Cas6b N-terminal domain DUF723 PF05265.13 gi|73668878|ref|YP_304893.1| - 0.13 12.2 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF723) RAMPs PF03787.15 gi|73668879|ref|YP_304894.1| - 6.8e-19 68.8 4.2 2.5e-17 63.6 0.5 2.3 2 0 0 2 2 2 2 RAMP superfamily RAMPs PF03787.15 gi|73668880|ref|YP_304895.1| - 0.00014 22.0 0.3 0.00014 22.0 0.3 2.6 2 1 0 2 2 2 1 RAMP superfamily RAMPs PF03787.15 gi|73668882|ref|YP_304897.1| - 4.5e-25 89.0 0.0 7.5e-25 88.2 0.0 1.4 1 1 0 1 1 1 1 RAMP superfamily Cas_Cmr3 PF09700.10 gi|73668882|ref|YP_304897.1| - 0.15 11.5 0.0 0.22 10.9 0.0 1.4 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr3) AAA_assoc_C PF09821.9 gi|73668883|ref|YP_304898.1| - 0.023 15.2 0.3 0.15 12.6 0.1 1.9 2 0 0 2 2 2 0 C-terminal AAA-associated domain TIMELESS PF04821.14 gi|73668883|ref|YP_304898.1| - 0.031 13.6 0.2 0.035 13.4 0.2 1.2 1 0 0 1 1 1 0 Timeless protein RAMPs PF03787.15 gi|73668884|ref|YP_304899.1| - 1.1e-06 28.9 2.3 4.3e-06 26.9 2.3 1.9 1 1 0 1 1 1 1 RAMP superfamily Methyltransf_15 PF09445.10 gi|73668886|ref|YP_304901.1| - 1.2e-11 44.5 0.0 2e-11 43.8 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_31 PF13847.6 gi|73668886|ref|YP_304901.1| - 4.1e-08 33.1 0.0 7e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668886|ref|YP_304901.1| - 6.4e-08 33.2 0.0 1.2e-07 32.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|73668886|ref|YP_304901.1| - 1.6e-06 27.7 0.0 2.5e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_11 PF08241.12 gi|73668886|ref|YP_304901.1| - 4.1e-06 27.4 0.0 9e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|73668886|ref|YP_304901.1| - 0.00059 19.6 0.0 0.00098 18.9 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.7 gi|73668886|ref|YP_304901.1| - 0.00059 19.8 0.0 0.0011 18.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|73668886|ref|YP_304901.1| - 0.0015 17.6 0.0 0.0023 17.0 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase MTS PF05175.14 gi|73668886|ref|YP_304901.1| - 0.0033 17.0 0.0 0.0058 16.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Peptidase_A25 PF03418.14 gi|73668886|ref|YP_304901.1| - 0.017 14.1 0.0 0.026 13.4 0.0 1.2 1 0 0 1 1 1 0 Germination protease Methyltr_RsmB-F PF01189.17 gi|73668886|ref|YP_304901.1| - 0.033 13.8 0.0 0.06 13.0 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F DOT1 PF08123.13 gi|73668886|ref|YP_304901.1| - 0.051 13.1 0.0 0.31 10.5 0.0 2.0 2 0 0 2 2 2 0 Histone methylation protein DOT1 CmcI PF04989.12 gi|73668886|ref|YP_304901.1| - 0.071 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Cephalosporin hydroxylase Thump_like PF18096.1 gi|73668886|ref|YP_304901.1| - 0.1 12.5 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 THUMP domain-like Cons_hypoth95 PF03602.15 gi|73668886|ref|YP_304901.1| - 0.11 12.1 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 GidB PF02527.15 gi|73668886|ref|YP_304901.1| - 0.12 11.7 0.0 0.21 10.9 0.0 1.4 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_12 PF08242.12 gi|73668886|ref|YP_304901.1| - 0.13 13.1 0.0 0.24 12.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_30 PF05430.11 gi|73668886|ref|YP_304901.1| - 0.13 12.1 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase FtsJ PF01728.19 gi|73668886|ref|YP_304901.1| - 0.14 12.3 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase UPF0020 PF01170.18 gi|73668886|ref|YP_304901.1| - 0.19 11.4 0.0 0.33 10.6 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 tRNA-synt_2c PF01411.19 gi|73668887|ref|YP_304902.1| - 7.5e-134 447.2 0.0 9.5e-134 446.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|73668887|ref|YP_304902.1| - 2.4e-21 76.6 1.7 5.1e-21 75.5 1.7 1.6 1 0 0 1 1 1 1 DHHA1 domain tRNA_SAD PF07973.14 gi|73668887|ref|YP_304902.1| - 3.6e-12 46.2 1.5 8.5e-12 45.0 1.5 1.7 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain LAMTOR5 PF16672.5 gi|73668887|ref|YP_304902.1| - 0.2 11.6 0.4 0.62 10.0 0.4 1.8 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 CRS1_YhbY PF01985.21 gi|73668888|ref|YP_304903.1| - 3.5e-20 72.0 2.2 3.8e-20 71.8 2.2 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain CelTOS PF18659.1 gi|73668888|ref|YP_304903.1| - 0.039 14.4 0.5 0.044 14.2 0.5 1.1 1 0 0 1 1 1 0 Cell-traversal protein for ookinetes and sporozoites DUF1724 PF08350.10 gi|73668889|ref|YP_304904.1| - 1.2e-18 67.0 0.0 2.4e-18 66.0 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|73668889|ref|YP_304904.1| - 5.8e-06 26.1 0.2 1.2e-05 25.1 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|73668889|ref|YP_304904.1| - 6.5e-05 22.7 0.0 0.00014 21.7 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HemN_C PF06969.16 gi|73668889|ref|YP_304904.1| - 0.0092 16.0 0.1 0.03 14.4 0.0 1.8 2 0 0 2 2 2 1 HemN C-terminal domain HTH_20 PF12840.7 gi|73668889|ref|YP_304904.1| - 0.012 15.6 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|73668889|ref|YP_304904.1| - 0.027 14.4 0.1 0.063 13.2 0.1 1.6 1 0 0 1 1 1 0 HTH domain Rrf2 PF02082.20 gi|73668889|ref|YP_304904.1| - 0.079 13.3 0.0 0.2 12.0 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator HTH_27 PF13463.6 gi|73668889|ref|YP_304904.1| - 0.12 12.9 0.0 0.22 12.1 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain Cupin_2 PF07883.11 gi|73668890|ref|YP_304905.1| - 2.4e-15 56.0 0.0 3.2e-15 55.6 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|73668890|ref|YP_304905.1| - 0.00017 21.5 0.0 0.0002 21.3 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain CENP-C_C PF11699.8 gi|73668890|ref|YP_304905.1| - 0.0024 18.0 0.1 0.0031 17.7 0.1 1.3 1 0 0 1 1 1 1 Mif2/CENP-C like Cupin_3 PF05899.12 gi|73668890|ref|YP_304905.1| - 0.0043 16.7 0.0 0.0065 16.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 gi|73668890|ref|YP_304905.1| - 0.083 12.5 0.0 0.095 12.3 0.0 1.2 1 0 0 1 1 1 0 Cupin CobA_CobO_BtuR PF02572.15 gi|73668891|ref|YP_304906.1| - 4.5e-55 186.6 0.0 5e-55 186.4 0.0 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IstB_IS21 PF01695.17 gi|73668891|ref|YP_304906.1| - 0.00035 20.4 0.2 0.19 11.5 0.0 2.1 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA PF00004.29 gi|73668891|ref|YP_304906.1| - 0.086 13.3 0.3 8.7 6.8 0.1 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|73668891|ref|YP_304906.1| - 0.12 12.5 0.0 0.2 11.7 0.0 1.5 1 1 0 1 1 1 0 AAA domain TPR_10 PF13374.6 gi|73668892|ref|YP_304907.1| - 8.8e-93 302.0 15.9 9.5e-15 53.9 0.1 8.5 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73668892|ref|YP_304907.1| - 7.3e-91 298.5 17.7 1.2e-24 86.4 0.5 5.9 2 2 1 5 5 5 5 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73668892|ref|YP_304907.1| - 5.8e-50 163.7 12.8 6.2e-07 29.0 0.1 7.6 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73668892|ref|YP_304907.1| - 2.5e-47 156.8 29.9 7.1e-07 28.8 1.4 7.6 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73668892|ref|YP_304907.1| - 1.7e-35 118.2 26.7 9.3e-06 25.4 0.4 7.6 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73668892|ref|YP_304907.1| - 2.2e-27 92.9 23.0 0.0023 18.0 0.2 7.8 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73668892|ref|YP_304907.1| - 2.3e-20 72.9 15.9 1.1e-05 26.0 2.7 6.4 5 2 1 6 6 6 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73668892|ref|YP_304907.1| - 1.5e-18 65.9 13.5 0.19 12.6 0.1 8.2 5 1 3 8 8 7 6 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73668892|ref|YP_304907.1| - 1.6e-17 63.7 11.4 0.00061 20.2 0.8 5.7 2 2 2 5 5 5 4 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73668892|ref|YP_304907.1| - 4.8e-15 55.8 0.9 1.1e-07 31.5 0.1 3.1 1 1 2 3 3 3 3 MalT-like TPR region SNAP PF14938.6 gi|73668892|ref|YP_304907.1| - 1.2e-13 51.2 0.0 5.4e-06 26.0 0.0 3.6 1 1 0 2 2 2 2 Soluble NSF attachment protein, SNAP TPR_17 PF13431.6 gi|73668892|ref|YP_304907.1| - 1.8e-13 49.9 17.3 0.018 15.4 0.2 8.4 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73668892|ref|YP_304907.1| - 5.5e-13 48.4 21.4 0.18 11.5 0.6 8.2 7 2 1 8 8 8 5 TPR repeat TPR_6 PF13174.6 gi|73668892|ref|YP_304907.1| - 1e-12 47.8 18.5 0.04 14.6 0.6 7.9 7 0 0 7 7 7 3 Tetratricopeptide repeat MIT PF04212.18 gi|73668892|ref|YP_304907.1| - 2.9e-11 43.2 14.3 0.082 13.0 0.0 7.8 4 2 4 8 8 7 3 MIT (microtubule interacting and transport) domain RPN7 PF10602.9 gi|73668892|ref|YP_304907.1| - 1.6e-10 41.0 3.2 3.8 7.2 0.0 7.1 1 1 6 7 7 7 1 26S proteasome subunit RPN7 TPR_5 PF12688.7 gi|73668892|ref|YP_304907.1| - 1.8e-10 41.1 5.1 0.029 14.6 0.0 6.3 3 1 3 6 6 6 2 Tetratrico peptide repeat DUF2225 PF09986.9 gi|73668892|ref|YP_304907.1| - 3e-09 36.9 0.2 0.08 12.7 0.0 3.8 1 1 3 4 4 4 4 Uncharacterized protein conserved in bacteria (DUF2225) EzrA PF06160.12 gi|73668892|ref|YP_304907.1| - 5.8e-09 34.7 1.0 0.4 8.8 0.0 6.2 7 0 0 7 7 7 2 Septation ring formation regulator, EzrA ANAPC3 PF12895.7 gi|73668892|ref|YP_304907.1| - 6.8e-08 32.6 8.5 0.055 13.7 0.8 5.4 1 1 4 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 gi|73668892|ref|YP_304907.1| - 7e-08 32.5 10.2 0.15 12.3 0.2 6.2 1 1 6 7 7 7 3 Tetratricopeptide repeat DUF3856 PF12968.7 gi|73668892|ref|YP_304907.1| - 2.5e-05 24.4 0.0 0.69 10.0 0.0 3.8 1 1 1 3 3 3 1 Domain of Unknown Function (DUF3856) SesA PF17107.5 gi|73668892|ref|YP_304907.1| - 3e-05 24.2 0.4 3.7 7.8 0.0 5.5 3 2 4 7 7 7 1 N-terminal domain on NACHT_NTPase and P-loop NTPases TPR_15 PF13429.6 gi|73668892|ref|YP_304907.1| - 3.4e-05 23.2 9.1 1.9 7.6 2.0 6.3 1 1 4 5 5 5 1 Tetratricopeptide repeat DUF5113 PF17140.4 gi|73668892|ref|YP_304907.1| - 0.00044 20.1 9.4 27 4.5 0.1 6.8 7 0 0 7 7 7 0 Domain of unknown function (DUF5113) DUF4404 PF14357.6 gi|73668892|ref|YP_304907.1| - 0.00051 20.6 12.9 9 7.0 0.0 7.3 8 1 1 9 9 6 0 Domain of unknown function (DUF4404) AAA_16 PF13191.6 gi|73668892|ref|YP_304907.1| - 0.0021 18.5 0.0 0.0073 16.7 0.0 2.0 2 0 0 2 2 1 1 AAA ATPase domain 14-3-3 PF00244.20 gi|73668892|ref|YP_304907.1| - 0.0023 17.5 5.1 2.4 7.6 0.0 4.8 1 1 5 7 7 7 1 14-3-3 protein TPR_4 PF07721.14 gi|73668892|ref|YP_304907.1| - 0.0032 18.0 0.5 1.7e+02 3.3 0.0 5.3 6 0 0 6 6 5 0 Tetratricopeptide repeat Tcf25 PF04910.14 gi|73668892|ref|YP_304907.1| - 0.0036 16.4 0.4 2.8 6.9 0.0 3.7 3 2 1 4 4 4 1 Transcriptional repressor TCF25 TPR_3 PF07720.12 gi|73668892|ref|YP_304907.1| - 0.0042 17.1 13.4 3.5 7.7 0.3 6.0 6 0 0 6 6 6 1 Tetratricopeptide repeat NB-ARC PF00931.22 gi|73668892|ref|YP_304907.1| - 0.055 12.6 0.1 0.24 10.6 0.0 2.1 2 0 0 2 2 2 0 NB-ARC domain ATPase_2 PF01637.18 gi|73668892|ref|YP_304907.1| - 0.11 12.4 4.0 0.047 13.6 1.0 2.1 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea Fis1_TPR_C PF14853.6 gi|73668892|ref|YP_304907.1| - 1.4 9.0 18.8 2 8.5 0.5 6.2 7 0 0 7 7 6 0 Fis1 C-terminal tetratricopeptide repeat DUF5347 PF17282.2 gi|73668892|ref|YP_304907.1| - 2.7 8.3 4.6 15 5.9 0.6 3.1 2 1 1 3 3 3 0 Family of unknown function (DUF5347) MoCF_biosynth PF00994.24 gi|73668893|ref|YP_304908.1| - 6.5e-34 116.7 0.1 7.5e-34 116.5 0.1 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain Glycos_transf_1 PF00534.20 gi|73668894|ref|YP_304909.1| - 3.6e-31 108.0 0.0 7.2e-31 107.0 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73668894|ref|YP_304909.1| - 2e-24 86.5 0.0 4.2e-24 85.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73668894|ref|YP_304909.1| - 2.9e-24 86.0 0.2 7.5e-24 84.6 0.1 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|73668894|ref|YP_304909.1| - 5.4e-18 65.9 0.0 9.5e-18 65.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|73668894|ref|YP_304909.1| - 5.4e-15 55.8 0.0 2.5e-06 27.4 0.0 2.2 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_trans_4_2 PF13477.6 gi|73668894|ref|YP_304909.1| - 2e-09 37.6 0.0 4.5e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|73668894|ref|YP_304909.1| - 0.00055 20.3 0.0 0.0013 19.0 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 GDE_C PF06202.14 gi|73668895|ref|YP_304910.1| - 9.9e-138 459.2 0.0 3.1e-137 457.6 0.0 1.7 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|73668895|ref|YP_304910.1| - 1.1e-66 224.3 0.0 1.7e-66 223.8 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.13 gi|73668895|ref|YP_304910.1| - 0.00094 18.4 0.1 0.0015 17.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Glyco_hydro_100 PF12899.7 gi|73668895|ref|YP_304910.1| - 0.0029 16.3 0.8 0.13 10.9 0.1 2.7 2 1 0 2 2 2 2 Alkaline and neutral invertase DUF1786 PF08735.10 gi|73668896|ref|YP_304911.1| - 1.2e-91 306.5 0.0 1.5e-91 306.1 0.0 1.1 1 0 0 1 1 1 1 Putative pyruvate format-lyase activating enzyme (DUF1786) DDR PF08841.10 gi|73668896|ref|YP_304911.1| - 0.00099 18.2 1.0 0.0023 17.0 0.1 2.0 2 1 1 3 3 3 1 Diol dehydratase reactivase ATPase-like domain Ribosomal_L16 PF00252.18 gi|73668897|ref|YP_304912.1| - 3.5e-31 108.0 0.4 4.2e-31 107.7 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e eIF-5_eIF-2B PF01873.17 gi|73668898|ref|YP_304913.1| - 3.7e-38 130.0 0.0 5.4e-38 129.5 0.0 1.2 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.20 gi|73668898|ref|YP_304913.1| - 1e-11 44.6 0.5 1e-11 44.6 0.5 1.8 2 0 0 2 2 2 1 TRAM domain DUF4265 PF14085.6 gi|73668898|ref|YP_304913.1| - 0.013 15.4 0.1 0.073 13.1 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4265) NMD3 PF04981.13 gi|73668898|ref|YP_304913.1| - 0.028 13.9 0.0 0.037 13.5 0.0 1.2 1 0 0 1 1 1 0 NMD3 family Zn-ribbon_8 PF09723.10 gi|73668898|ref|YP_304913.1| - 0.053 13.7 0.4 0.12 12.5 0.4 1.6 1 0 0 1 1 1 0 Zinc ribbon domain DZR PF12773.7 gi|73668898|ref|YP_304913.1| - 0.11 12.5 0.3 0.18 11.9 0.3 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|73668898|ref|YP_304913.1| - 0.12 11.8 1.2 4.9 6.7 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.8 gi|73668898|ref|YP_304913.1| - 0.27 11.1 2.6 0.78 9.7 0.2 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Radical_SAM PF04055.21 gi|73668899|ref|YP_304914.1| - 1.5e-09 38.4 0.0 3.1e-09 37.4 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|73668899|ref|YP_304914.1| - 0.00038 20.9 0.0 0.00082 19.8 0.0 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain NAD_binding_2 PF03446.15 gi|73668899|ref|YP_304914.1| - 0.0019 18.4 0.0 0.0033 17.6 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase tRNA-synt_1b PF00579.25 gi|73668900|ref|YP_304915.1| - 1.9e-33 116.1 0.0 1.4e-17 64.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) tRNA-synt_2d PF01409.20 gi|73668901|ref|YP_304916.1| - 7.7e-89 297.4 0.0 1.1e-88 296.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|73668901|ref|YP_304916.1| - 2e-07 30.7 0.0 8.6e-06 25.3 0.0 2.2 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 gi|73668901|ref|YP_304916.1| - 0.00067 18.8 0.3 0.025 13.7 0.0 2.7 3 0 0 3 3 3 1 tRNA synthetases class II (D, K and N) TrmB PF01978.19 gi|73668901|ref|YP_304916.1| - 0.097 12.6 1.6 0.2 11.6 0.2 2.2 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB Rio2_N PF09202.11 gi|73668901|ref|YP_304916.1| - 0.1 12.8 0.1 6.3 7.1 0.0 2.4 2 0 0 2 2 2 0 Rio2, N-terminal MarR PF01047.22 gi|73668901|ref|YP_304916.1| - 0.12 12.3 0.0 0.38 10.7 0.0 1.9 1 0 0 1 1 1 0 MarR family Helicase_C_2 PF13307.6 gi|73668902|ref|YP_304917.1| - 2e-31 109.4 0.0 6.4e-31 107.8 0.0 1.8 2 0 0 2 2 2 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|73668902|ref|YP_304917.1| - 3.9e-15 55.9 2.4 3.3e-14 52.9 2.4 2.1 1 1 0 1 1 1 1 DEAD_2 ResIII PF04851.15 gi|73668902|ref|YP_304917.1| - 1.1e-07 32.0 1.0 9.6e-06 25.7 1.0 2.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|73668902|ref|YP_304917.1| - 2.4e-06 27.4 0.2 0.00017 21.4 0.0 2.7 3 0 0 3 3 3 1 DEAD/DEAH box helicase Zot PF05707.12 gi|73668902|ref|YP_304917.1| - 0.00024 20.8 0.1 0.64 9.6 0.0 2.4 2 0 0 2 2 2 2 Zonular occludens toxin (Zot) PhoH PF02562.16 gi|73668902|ref|YP_304917.1| - 0.0019 17.7 0.1 0.0078 15.7 0.1 1.9 2 0 0 2 2 2 1 PhoH-like protein AAA PF00004.29 gi|73668902|ref|YP_304917.1| - 0.012 16.1 0.2 7.5 7.0 0.0 2.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 gi|73668902|ref|YP_304917.1| - 0.036 13.3 0.1 2.4 7.3 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ATPase PF06745.13 gi|73668902|ref|YP_304917.1| - 0.065 12.6 0.1 0.12 11.7 0.1 1.4 1 0 0 1 1 1 0 KaiC DnaJ PF00226.31 gi|73668902|ref|YP_304917.1| - 0.094 12.9 1.1 9.7 6.4 0.5 3.5 3 0 0 3 3 3 0 DnaJ domain AAA_34 PF13872.6 gi|73668902|ref|YP_304917.1| - 0.13 11.2 0.0 0.22 10.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 Sigma54_activat PF00158.26 gi|73668902|ref|YP_304917.1| - 0.15 11.7 0.0 0.47 10.1 0.0 1.8 1 0 0 1 1 1 0 Sigma-54 interaction domain OmpH PF03938.14 gi|73668902|ref|YP_304917.1| - 0.18 12.1 1.3 0.44 10.9 1.3 1.6 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) HTH_56 PF18662.1 gi|73668902|ref|YP_304917.1| - 0.66 10.1 3.1 0.6 10.2 0.1 2.5 3 0 0 3 3 3 0 Cch helix turn helix domain HxlR PF01638.17 gi|73668903|ref|YP_304918.1| - 1.8e-33 114.2 0.1 2.2e-33 114.0 0.1 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR PF01047.22 gi|73668903|ref|YP_304918.1| - 0.003 17.5 0.0 0.0048 16.8 0.0 1.4 1 0 0 1 1 1 1 MarR family PadR PF03551.14 gi|73668903|ref|YP_304918.1| - 0.004 17.1 0.0 0.0058 16.6 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|73668903|ref|YP_304918.1| - 0.018 14.6 0.0 0.032 13.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|73668903|ref|YP_304918.1| - 0.049 13.5 0.0 1.2 9.1 0.0 2.2 2 0 0 2 2 2 0 MarR family B-block_TFIIIC PF04182.12 gi|73668903|ref|YP_304918.1| - 0.085 13.0 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_Crp_2 PF13545.6 gi|73668903|ref|YP_304918.1| - 0.12 12.3 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain FMN_red PF03358.15 gi|73668904|ref|YP_304919.1| - 1.3e-26 93.2 0.0 2.1e-26 92.5 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73668904|ref|YP_304919.1| - 1.4e-13 51.0 0.0 1.6e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|73668904|ref|YP_304919.1| - 0.0019 18.5 0.0 0.003 17.8 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Nitroreductase PF00881.24 gi|73668905|ref|YP_304920.1| - 9.6e-30 103.9 0.4 4.8e-17 62.5 0.2 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|73668905|ref|YP_304920.1| - 1.4e-13 50.9 0.0 4.8e-05 23.0 0.1 3.1 1 1 2 3 3 3 3 Putative TM nitroreductase ABM PF03992.16 gi|73668907|ref|YP_304922.1| - 2e-18 66.2 0.0 2.7e-18 65.9 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase RelB_N PF18506.1 gi|73668907|ref|YP_304922.1| - 0.19 11.6 1.5 1.3 8.9 0.1 2.7 2 1 1 3 3 3 0 RelB Antitoxin alpha helical domain PI3K_P85_iSH2 PF16454.5 gi|73668909|ref|YP_304924.1| - 0.015 14.9 1.1 0.027 14.1 0.2 1.9 1 1 2 3 3 3 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain UxaC PF02614.14 gi|73668909|ref|YP_304924.1| - 0.035 13.0 0.4 0.042 12.7 0.4 1.1 1 0 0 1 1 1 0 Glucuronate isomerase SOR_SNZ PF01680.17 gi|73668909|ref|YP_304924.1| - 0.051 13.3 1.0 0.082 12.7 1.0 1.4 1 1 0 1 1 1 0 SOR/SNZ family DUF2203 PF09969.9 gi|73668909|ref|YP_304924.1| - 0.44 11.3 2.8 2.3 8.9 0.4 2.5 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) CorA PF01544.18 gi|73668909|ref|YP_304924.1| - 0.64 9.3 3.7 0.71 9.1 3.1 1.4 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein Fib_alpha PF08702.10 gi|73668909|ref|YP_304924.1| - 0.72 10.0 9.3 0.59 10.3 2.3 2.3 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family SOGA PF11365.8 gi|73668909|ref|YP_304924.1| - 0.99 10.6 8.0 0.63 11.2 0.3 3.3 1 1 2 3 3 3 0 Protein SOGA DUF5082 PF16888.5 gi|73668909|ref|YP_304924.1| - 1.5 9.1 16.3 1.2 9.5 5.0 2.8 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) DUF4200 PF13863.6 gi|73668909|ref|YP_304924.1| - 2.1 8.8 6.6 0.35 11.3 1.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) DUF2353 PF09789.9 gi|73668910|ref|YP_304925.1| - 0.0048 16.3 4.9 0.0054 16.1 4.9 1.1 1 0 0 1 1 1 1 Uncharacterized coiled-coil protein (DUF2353) UPF0242 PF06785.11 gi|73668910|ref|YP_304925.1| - 0.036 14.2 1.5 0.048 13.8 1.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Zip PF02535.22 gi|73668910|ref|YP_304925.1| - 0.039 13.2 0.5 0.044 13.0 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Conotoxin PF02950.17 gi|73668910|ref|YP_304925.1| - 0.048 14.7 1.3 0.81 10.8 0.0 2.2 1 1 1 2 2 2 0 Conotoxin O-antigen_lig PF13425.6 gi|73668910|ref|YP_304925.1| - 0.24 10.1 2.6 0.28 9.9 2.6 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Presenilin PF01080.17 gi|73668910|ref|YP_304925.1| - 0.4 9.4 3.5 0.43 9.3 3.5 1.1 1 0 0 1 1 1 0 Presenilin DUF4834 PF16118.5 gi|73668910|ref|YP_304925.1| - 1.6 9.8 8.6 6.3 7.8 8.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) FMN_red PF03358.15 gi|73668911|ref|YP_304926.1| - 2.8e-34 118.1 0.0 3.3e-34 117.9 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73668911|ref|YP_304926.1| - 2.3e-11 43.8 0.0 2.7e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold DUF2284 PF10050.9 gi|73668911|ref|YP_304926.1| - 0.0043 16.8 0.3 0.0072 16.1 0.3 1.3 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) Flavodoxin_5 PF12724.7 gi|73668911|ref|YP_304926.1| - 0.16 12.2 0.0 6 7.1 0.0 2.3 1 1 1 2 2 2 0 Flavodoxin domain FdhD-NarQ PF02634.15 gi|73668912|ref|YP_304927.1| - 3.2e-54 184.1 0.1 3.7e-54 183.9 0.1 1.0 1 0 0 1 1 1 1 FdhD/NarQ family Pilin_N PF07790.11 gi|73668914|ref|YP_304929.1| - 1.8e-16 60.8 0.9 2.4e-15 57.2 0.6 2.4 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Flo11 PF10182.9 gi|73668914|ref|YP_304929.1| - 0.0054 16.9 0.5 0.07 13.3 0.2 2.7 3 0 0 3 3 3 1 Flo11 domain Pilin_N PF07790.11 gi|73668915|ref|YP_304930.1| - 3.3e-22 79.2 2.8 3.3e-22 79.2 2.8 1.9 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Yae1_N PF09811.9 gi|73668916|ref|YP_304931.1| - 0.00051 19.7 1.4 0.11 12.2 0.3 2.4 2 0 0 2 2 2 2 Essential protein Yae1, N terminal DUF4006 PF13179.6 gi|73668916|ref|YP_304931.1| - 0.12 12.2 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF4006) Met_10 PF02475.16 gi|73668917|ref|YP_304932.1| - 7.6e-63 211.9 0.0 9.7e-63 211.5 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|73668917|ref|YP_304932.1| - 3.2e-19 68.5 0.5 7.7e-19 67.3 0.5 1.6 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain MTS PF05175.14 gi|73668917|ref|YP_304932.1| - 1.5e-07 31.1 0.0 3.5e-07 29.9 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|73668917|ref|YP_304932.1| - 4.5e-07 30.5 0.0 1.7e-06 28.7 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 gi|73668917|ref|YP_304932.1| - 7.6e-07 28.8 0.0 1.1e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|73668917|ref|YP_304932.1| - 3.8e-06 26.8 0.0 6.7e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|73668917|ref|YP_304932.1| - 1.2e-05 25.0 0.0 1.9e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltr_RsmB-F PF01189.17 gi|73668917|ref|YP_304932.1| - 3.4e-05 23.6 0.0 0.00012 21.8 0.0 1.7 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltransf_24 PF13578.6 gi|73668917|ref|YP_304932.1| - 3.8e-05 24.7 0.0 0.0014 19.7 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain TRM PF02005.16 gi|73668917|ref|YP_304932.1| - 5.1e-05 22.6 0.0 6.6e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.10 gi|73668917|ref|YP_304932.1| - 0.00028 20.5 0.0 0.00042 19.9 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase ADH_zinc_N PF00107.26 gi|73668917|ref|YP_304932.1| - 0.0005 20.0 0.0 0.00077 19.4 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_12 PF08242.12 gi|73668917|ref|YP_304932.1| - 0.0025 18.5 0.0 0.0052 17.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|73668917|ref|YP_304932.1| - 0.0068 15.7 0.0 0.01 15.1 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PRMT5 PF05185.16 gi|73668917|ref|YP_304932.1| - 0.0099 15.7 0.0 0.022 14.6 0.0 1.6 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase Methyltransf_4 PF02390.17 gi|73668917|ref|YP_304932.1| - 0.01 15.3 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_18 PF12847.7 gi|73668917|ref|YP_304932.1| - 0.016 15.2 0.0 0.039 13.9 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73668917|ref|YP_304932.1| - 0.053 14.2 0.0 0.12 13.0 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|73668917|ref|YP_304932.1| - 0.13 12.0 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 DNA methylase LysE PF01810.18 gi|73668918|ref|YP_304933.1| - 1.7e-29 102.7 16.2 2e-29 102.5 16.2 1.0 1 0 0 1 1 1 1 LysE type translocator DUF3185 PF11381.8 gi|73668918|ref|YP_304933.1| - 0.15 12.1 0.3 0.15 12.1 0.3 3.3 4 0 0 4 4 4 0 Protein of unknown function (DUF3185) TFIIB PF00382.19 gi|73668919|ref|YP_304934.1| - 1.5e-44 149.9 2.0 3.1e-21 75.2 0.4 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|73668919|ref|YP_304934.1| - 1.5e-18 66.0 0.9 1.5e-18 66.0 0.9 1.8 2 0 0 2 2 2 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|73668919|ref|YP_304934.1| - 0.00034 20.5 0.5 0.00086 19.2 0.5 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Sigma70_r4 PF04545.16 gi|73668919|ref|YP_304934.1| - 0.0035 16.8 0.5 0.019 14.4 0.1 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 Lar_restr_allev PF14354.6 gi|73668919|ref|YP_304934.1| - 0.0047 17.3 1.4 0.045 14.1 0.3 2.7 3 0 0 3 3 3 1 Restriction alleviation protein Lar Cyclin_C PF02984.19 gi|73668919|ref|YP_304934.1| - 0.0052 16.9 0.0 5.3 7.2 0.0 2.7 3 0 0 3 3 3 2 Cyclin, C-terminal domain RPA_interact_C PF14768.6 gi|73668919|ref|YP_304934.1| - 0.0081 16.7 0.0 0.6 10.7 0.0 2.5 2 0 0 2 2 2 1 Replication protein A interacting C-terminal HTH_AsnC-type PF13404.6 gi|73668919|ref|YP_304934.1| - 0.015 15.1 0.4 0.057 13.3 0.2 2.2 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DZR PF12773.7 gi|73668919|ref|YP_304934.1| - 0.087 12.9 1.1 0.48 10.5 0.3 2.3 2 0 0 2 2 2 0 Double zinc ribbon zf-ACC PF17848.1 gi|73668919|ref|YP_304934.1| - 0.088 12.9 1.7 5.4 7.2 0.7 3.0 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain A2L_zn_ribbon PF08792.10 gi|73668919|ref|YP_304934.1| - 0.12 12.1 1.6 0.53 10.1 1.6 2.0 1 1 0 1 1 1 0 A2L zinc ribbon domain HTH_31 PF13560.6 gi|73668919|ref|YP_304934.1| - 0.2 12.0 3.7 7.7 6.9 0.1 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain Zn-ribbon_8 PF09723.10 gi|73668919|ref|YP_304934.1| - 0.41 10.8 6.8 0.19 11.9 0.5 3.1 2 1 1 3 3 3 0 Zinc ribbon domain DUF35_N PF12172.8 gi|73668919|ref|YP_304934.1| - 0.43 10.5 0.0 0.43 10.5 0.0 2.5 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Ribosomal_S27e PF01667.17 gi|73668919|ref|YP_304934.1| - 0.5 10.1 1.8 0.5 10.1 0.2 1.8 2 0 0 2 2 2 0 Ribosomal protein S27 Zn_Tnp_IS1595 PF12760.7 gi|73668919|ref|YP_304934.1| - 1 9.4 4.6 0.18 11.8 0.4 1.9 2 0 0 2 2 1 0 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|73668919|ref|YP_304934.1| - 1.1 8.8 4.5 16 5.1 4.5 2.4 1 1 0 1 1 1 0 zinc-ribbon domain Methyltransf_13 PF08421.11 gi|73668919|ref|YP_304934.1| - 1.8 8.9 5.8 2.4 8.4 0.1 2.8 2 1 1 3 3 3 0 Putative zinc binding domain Nudix_N_2 PF14803.6 gi|73668919|ref|YP_304934.1| - 2.7 8.0 6.1 4.6 7.2 2.7 3.0 2 1 1 3 3 3 0 Nudix N-terminal Gar1 PF04410.14 gi|73668920|ref|YP_304935.1| - 5.4e-08 32.8 0.0 5.5e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region PEP-utilizers_C PF02896.18 gi|73668921|ref|YP_304936.1| - 1.1e-92 310.3 0.1 1.9e-92 309.5 0.1 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 gi|73668921|ref|YP_304936.1| - 9.9e-64 215.7 0.0 1.6e-37 129.5 0.0 3.3 1 1 2 3 3 3 3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|73668921|ref|YP_304936.1| - 5.2e-29 99.8 1.2 1.2e-28 98.6 1.2 1.7 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain HAS-barrel PF09378.10 gi|73668921|ref|YP_304936.1| - 0.11 12.7 0.1 0.44 10.7 0.1 2.0 1 0 0 1 1 1 0 HAS barrel domain PEP-utilisers_N PF05524.13 gi|73668921|ref|YP_304936.1| - 0.17 12.1 0.6 1.7 8.9 0.1 2.8 3 0 0 3 3 3 0 PEP-utilising enzyme, N-terminal DDE_Tnp_1 PF01609.21 gi|73668922|ref|YP_304937.1| - 5.8e-24 84.9 0.4 5.8e-24 84.9 0.4 1.7 2 1 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_4 PF13701.6 gi|73668922|ref|YP_304937.1| - 0.00046 18.6 0.3 0.00069 18.0 0.3 1.2 1 0 0 1 1 1 1 Transposase DDE domain group 1 DDE_Tnp_2 PF04693.12 gi|73668922|ref|YP_304937.1| - 0.003 16.8 0.5 0.0049 16.2 0.5 1.3 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 PRD1_DD PF11087.8 gi|73668922|ref|YP_304937.1| - 0.21 11.3 1.0 0.36 10.5 0.2 1.8 2 0 0 2 2 2 0 PRD1 phage membrane DNA delivery DDE_Tnp_1 PF01609.21 gi|73668923|ref|YP_304938.1| - 0.014 15.0 0.1 0.017 14.7 0.1 1.1 1 0 0 1 1 1 0 Transposase DDE domain LETM1 PF07766.13 gi|73668923|ref|YP_304938.1| - 0.026 13.9 0.1 0.029 13.7 0.1 1.1 1 0 0 1 1 1 0 LETM1-like protein DDE_Tnp_1 PF01609.21 gi|73668924|ref|YP_304939.1| - 5e-07 29.6 0.0 7.8e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_assoc PF13808.6 gi|73668924|ref|YP_304939.1| - 0.062 13.3 0.0 0.17 11.9 0.0 1.8 1 1 0 1 1 1 0 DDE_Tnp_1-associated PMT_2 PF13231.6 gi|73668925|ref|YP_304940.1| - 3.2e-12 47.0 19.7 3.2e-12 47.0 19.7 2.7 3 1 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.18 gi|73668925|ref|YP_304940.1| - 0.0011 18.6 14.1 0.0011 18.6 14.1 1.7 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF362 PF04015.12 gi|73668926|ref|YP_304941.1| - 5.4e-26 92.1 0.0 8.7e-26 91.4 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF362) LPG_synthase_TM PF03706.13 gi|73668927|ref|YP_304942.1| - 3.8e-35 121.9 16.1 4.6e-35 121.6 16.1 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region GAPT PF11770.8 gi|73668927|ref|YP_304942.1| - 0.12 12.2 1.2 0.17 11.7 0.2 1.7 2 0 0 2 2 2 0 GRB2-binding adapter (GAPT) PHP PF02811.19 gi|73668928|ref|YP_304943.1| - 3e-14 53.7 0.3 3.6e-14 53.4 0.3 1.2 1 1 0 1 1 1 1 PHP domain PHP_C PF13263.6 gi|73668928|ref|YP_304943.1| - 4.4e-12 45.6 0.1 9.7e-12 44.5 0.0 1.6 2 0 0 2 2 2 1 PHP-associated LpxC PF03331.13 gi|73668928|ref|YP_304943.1| - 0.0041 16.6 0.0 0.0051 16.3 0.0 1.2 1 0 0 1 1 1 1 UDP-3-O-acyl N-acetylglycosamine deacetylase PMT_2 PF13231.6 gi|73668929|ref|YP_304944.1| - 7.6e-14 52.2 16.8 7.6e-14 52.2 16.8 3.8 3 1 2 5 5 5 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Glyco_transf_22 PF03901.17 gi|73668929|ref|YP_304944.1| - 9.8 5.3 51.6 2.7e+02 0.5 51.6 2.7 1 1 0 1 1 1 0 Alg9-like mannosyltransferase family UbiA PF01040.18 gi|73668930|ref|YP_304945.1| - 1.2e-28 100.1 12.2 2e-28 99.4 12.2 1.3 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF4231 PF14015.6 gi|73668930|ref|YP_304945.1| - 0.86 10.1 7.2 0.54 10.7 0.4 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF4231) Transposase_20 PF02371.16 gi|73668931|ref|YP_304946.1| - 3.2e-28 97.9 0.0 7.4e-28 96.7 0.0 1.6 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|73668931|ref|YP_304946.1| - 3.5e-19 69.2 0.1 8.2e-19 68.0 0.0 1.6 2 0 0 2 2 2 1 Transposase 5_3_exonuc PF01367.20 gi|73668931|ref|YP_304946.1| - 0.35 11.5 2.7 2.9 8.6 0.6 3.2 2 1 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Transposase_20 PF02371.16 gi|73668932|ref|YP_304947.1| - 2.9e-27 94.8 0.0 7.3e-27 93.5 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|73668932|ref|YP_304947.1| - 7.2e-18 64.9 0.1 2.3e-17 63.3 0.1 1.8 1 0 0 1 1 1 1 Transposase 5_3_exonuc PF01367.20 gi|73668932|ref|YP_304947.1| - 0.002 18.7 3.3 1.8 9.2 0.0 3.3 2 1 1 3 3 3 2 5'-3' exonuclease, C-terminal SAM fold HTH_23 PF13384.6 gi|73668933|ref|YP_304948.1| - 1.8e-06 27.6 0.0 2.9e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 gi|73668933|ref|YP_304948.1| - 6.4e-05 22.9 0.0 0.0001 22.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.6 gi|73668933|ref|YP_304948.1| - 7.3e-05 22.8 0.0 0.00011 22.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_32 PF13565.6 gi|73668933|ref|YP_304948.1| - 8.5e-05 23.1 0.0 0.00014 22.4 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain DDE_3 PF13358.6 gi|73668934|ref|YP_304949.1| - 2.6e-20 72.7 0.2 2.6e-20 72.7 0.2 1.6 2 0 0 2 2 2 1 DDE superfamily endonuclease DDE_1 PF03184.19 gi|73668934|ref|YP_304949.1| - 6e-07 29.3 0.4 8.1e-07 28.9 0.4 1.3 1 0 0 1 1 1 1 DDE superfamily endonuclease rve PF00665.26 gi|73668934|ref|YP_304949.1| - 6.8e-06 26.3 0.0 1.4e-05 25.3 0.0 1.5 2 0 0 2 2 2 1 Integrase core domain Ribosomal_S2 PF00318.20 gi|73668934|ref|YP_304949.1| - 0.0057 15.9 4.2 0.088 12.0 0.3 2.1 2 0 0 2 2 2 2 Ribosomal protein S2 SPC25 PF06703.11 gi|73668935|ref|YP_304950.1| - 0.037 13.8 1.1 0.037 13.8 1.1 2.8 3 0 0 3 3 3 0 Microsomal signal peptidase 25 kDa subunit (SPC25) TMEM208_SND2 PF05620.11 gi|73668935|ref|YP_304950.1| - 1.9 8.2 11.6 9.4 6.0 0.1 3.2 3 0 0 3 3 3 0 SRP-independent targeting protein 2/TMEM208 PMT_2 PF13231.6 gi|73668935|ref|YP_304950.1| - 3.8 7.7 24.7 0.064 13.5 16.4 2.1 2 1 0 2 2 2 0 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF362 PF04015.12 gi|73668936|ref|YP_304951.1| - 5.3e-26 92.1 0.0 8.7e-26 91.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF362) LPG_synthase_TM PF03706.13 gi|73668937|ref|YP_304952.1| - 5e-35 121.5 16.0 6e-35 121.2 16.0 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region GAPT PF11770.8 gi|73668937|ref|YP_304952.1| - 0.09 12.6 0.7 0.17 11.7 0.1 1.8 2 0 0 2 2 2 0 GRB2-binding adapter (GAPT) PHP PF02811.19 gi|73668938|ref|YP_304953.1| - 1.6e-12 48.1 0.1 2e-12 47.8 0.1 1.2 1 0 0 1 1 1 1 PHP domain PHP_C PF13263.6 gi|73668938|ref|YP_304953.1| - 3.1e-12 46.0 0.1 9.7e-12 44.5 0.0 1.9 2 0 0 2 2 2 1 PHP-associated LpxC PF03331.13 gi|73668938|ref|YP_304953.1| - 0.003 17.1 0.0 0.0038 16.8 0.0 1.2 1 0 0 1 1 1 1 UDP-3-O-acyl N-acetylglycosamine deacetylase TPR_1 PF00515.28 gi|73668939|ref|YP_304954.1| - 0.025 14.4 0.1 0.058 13.2 0.1 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73668939|ref|YP_304954.1| - 0.06 13.9 0.0 2.6 8.6 0.0 2.5 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF5325 PF17259.2 gi|73668939|ref|YP_304954.1| - 6.8 6.7 8.4 4.3 7.3 1.5 3.2 2 0 0 2 2 2 0 Family of unknown function (DUF5325) UbiA PF01040.18 gi|73668940|ref|YP_304955.1| - 6.5e-25 87.9 20.8 2.3e-24 86.1 20.1 1.9 1 1 1 2 2 2 1 UbiA prenyltransferase family polyprenyl_synt PF00348.17 gi|73668941|ref|YP_304956.1| - 1.3e-69 234.2 0.1 1.5e-69 233.9 0.1 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase RMMBL PF07521.12 gi|73668942|ref|YP_304957.1| - 8.1e-09 35.3 2.1 1.8e-08 34.2 0.1 2.5 3 0 0 3 3 3 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|73668942|ref|YP_304957.1| - 8.2e-09 35.3 0.9 4.7e-08 32.8 0.1 2.3 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|73668942|ref|YP_304957.1| - 4.6e-08 33.3 0.1 8.5e-08 32.4 0.1 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily DRTGG PF07085.12 gi|73668942|ref|YP_304957.1| - 0.018 14.8 0.8 1.4 8.7 0.1 3.1 3 0 0 3 3 3 0 DRTGG domain FMN_dh PF01070.18 gi|73668943|ref|YP_304958.1| - 1e-32 113.5 2.7 3.6e-22 78.9 2.0 2.3 1 1 2 3 3 3 2 FMN-dependent dehydrogenase NMO PF03060.15 gi|73668943|ref|YP_304958.1| - 5.9e-05 22.6 0.6 5.9e-05 22.6 0.6 1.6 2 0 0 2 2 2 1 Nitronate monooxygenase IMPDH PF00478.25 gi|73668943|ref|YP_304958.1| - 7.2e-05 21.9 10.1 0.0014 17.7 0.5 3.7 4 1 1 5 5 5 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|73668943|ref|YP_304958.1| - 0.00038 19.7 0.3 0.00076 18.7 0.3 1.5 1 0 0 1 1 1 1 Conserved region in glutamate synthase DHO_dh PF01180.21 gi|73668943|ref|YP_304958.1| - 0.0015 17.8 3.5 0.0019 17.5 0.1 2.3 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase His_biosynth PF00977.21 gi|73668943|ref|YP_304958.1| - 0.021 14.3 0.3 1 8.8 0.1 2.9 3 0 0 3 3 3 0 Histidine biosynthesis protein G3P_antiterm PF04309.12 gi|73668943|ref|YP_304958.1| - 0.11 11.9 0.2 0.29 10.5 0.2 1.6 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator AA_kinase PF00696.28 gi|73668944|ref|YP_304959.1| - 3.6e-40 138.1 0.1 4.1e-40 137.9 0.1 1.0 1 0 0 1 1 1 1 Amino acid kinase family GHMP_kinases_N PF00288.26 gi|73668945|ref|YP_304960.1| - 5.7e-16 58.5 0.4 5.7e-16 58.5 0.4 1.7 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|73668945|ref|YP_304960.1| - 5.2e-10 39.5 0.2 1.3e-09 38.3 0.2 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.9 gi|73668945|ref|YP_304960.1| - 0.0063 16.1 0.1 0.015 14.9 0.1 1.6 1 0 0 1 1 1 1 Galactokinase galactose-binding signature ELYS-bb PF16687.5 gi|73668945|ref|YP_304960.1| - 0.2 10.2 0.0 0.29 9.7 0.0 1.2 1 0 0 1 1 1 0 beta-propeller of ELYS nucleoporin Memo PF01875.17 gi|73668946|ref|YP_304961.1| - 1.5e-81 273.5 0.0 1.8e-81 273.3 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.18 gi|73668946|ref|YP_304961.1| - 0.0045 16.1 0.0 0.0054 15.8 0.0 1.3 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase Ribosomal_S2 PF00318.20 gi|73668947|ref|YP_304962.1| - 6.6e-24 84.3 0.1 5.8e-14 51.8 0.1 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 RNA_pol_Rpb6 PF01192.22 gi|73668948|ref|YP_304963.1| - 3.6e-13 49.2 0.1 4e-13 49.1 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 RNA_pol_N PF01194.17 gi|73668949|ref|YP_304964.1| - 5.1e-30 103.6 0.3 5.5e-30 103.4 0.3 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Toxin_8 PF07365.12 gi|73668949|ref|YP_304964.1| - 0.044 14.0 0.5 0.084 13.1 0.6 1.4 1 1 0 1 1 1 0 Alpha conotoxin precursor Ribosomal_S9 PF00380.19 gi|73668950|ref|YP_304965.1| - 1.3e-31 109.6 0.1 1.5e-31 109.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.18 gi|73668951|ref|YP_304966.1| - 1.5e-12 47.9 0.1 1.1e-10 41.8 0.1 2.1 1 1 0 1 1 1 1 Ribosomal protein L13 Ribosomal_L18 PF17135.4 gi|73668952|ref|YP_304967.1| - 6.8e-12 45.2 0.0 8.2e-12 44.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|73668952|ref|YP_304967.1| - 6.4e-08 33.3 0.0 1.1e-07 32.6 0.0 1.5 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Trp_Tyr_perm PF03222.13 gi|73668952|ref|YP_304967.1| - 0.25 10.3 0.0 0.33 9.9 0.0 1.2 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family TPP_enzyme_N PF02776.18 gi|73668953|ref|YP_304968.1| - 2.8e-31 108.5 0.0 5.2e-31 107.6 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|73668953|ref|YP_304968.1| - 2.2e-18 66.5 0.0 1.1e-16 61.0 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|73668953|ref|YP_304968.1| - 1.1e-17 64.0 0.0 3e-17 62.6 0.0 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain DUF2240 PF09999.9 gi|73668954|ref|YP_304969.1| - 2.9e-48 163.2 0.1 3.3e-48 163.0 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) 2-Hacid_dh_C PF02826.19 gi|73668955|ref|YP_304970.1| - 8e-62 207.7 0.0 1.4e-61 207.0 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|73668955|ref|YP_304970.1| - 1.2e-40 138.2 0.5 3.1e-40 136.9 0.6 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 gi|73668955|ref|YP_304970.1| - 4.9e-06 26.2 0.0 1.6e-05 24.5 0.0 2.0 1 0 0 1 1 1 1 ACT domain IlvN PF07991.12 gi|73668955|ref|YP_304970.1| - 7.1e-06 25.7 0.0 5.8e-05 22.7 0.0 2.3 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 gi|73668955|ref|YP_304970.1| - 0.00043 20.5 1.5 0.0019 18.4 0.1 2.4 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase RPA_C PF08784.11 gi|73668956|ref|YP_304971.1| - 0.077 13.7 0.0 0.13 12.9 0.0 1.3 1 0 0 1 1 1 0 Replication protein A C terminal tRNA_anti-codon PF01336.25 gi|73668957|ref|YP_304972.1| - 1.7e-07 31.1 1.0 0.07 13.1 0.0 4.2 4 2 0 4 4 4 2 OB-fold nucleic acid binding domain NosD PF05048.13 gi|73668958|ref|YP_304973.1| - 3e-46 157.6 17.8 3e-46 157.6 17.8 1.7 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73668958|ref|YP_304973.1| - 4.6e-13 49.3 17.4 1.1e-12 48.1 17.4 1.8 1 1 0 1 1 1 1 Right handed beta helix region Pectate_lyase_3 PF12708.7 gi|73668958|ref|YP_304973.1| - 3.9e-05 23.6 4.5 3.9e-05 23.6 4.5 1.7 2 0 0 2 2 2 1 Pectate lyase superfamily protein Lactonase PF10282.9 gi|73668959|ref|YP_304974.1| - 4.4e-18 65.7 9.6 1.5e-05 24.4 0.6 4.4 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|73668959|ref|YP_304974.1| - 4e-12 46.3 20.1 1.3e-05 24.9 0.7 4.4 1 1 3 4 4 4 4 SMP-30/Gluconolactonase/LRE-like region Cytochrom_D1 PF02239.16 gi|73668959|ref|YP_304974.1| - 4.1e-10 38.7 5.0 9.6e-05 21.1 0.3 3.7 1 1 2 3 3 3 3 Cytochrome D1 heme domain NHL PF01436.21 gi|73668959|ref|YP_304974.1| - 4.3e-10 39.1 12.8 0.016 15.2 0.0 6.4 7 0 0 7 7 7 3 NHL repeat Glu_cyclase_2 PF05096.12 gi|73668959|ref|YP_304974.1| - 2.3e-06 27.2 4.5 6.4e-05 22.5 2.2 3.2 1 1 1 2 2 2 1 Glutamine cyclotransferase MATH PF00917.26 gi|73668959|ref|YP_304974.1| - 0.00017 21.7 0.0 3.2 7.9 0.0 4.6 4 1 1 5 5 5 1 MATH domain Arylesterase PF01731.20 gi|73668959|ref|YP_304974.1| - 0.00025 21.2 10.1 1.1 9.5 0.1 6.1 1 1 6 7 7 7 1 Arylesterase PCC_BT PF18140.1 gi|73668959|ref|YP_304974.1| - 0.00093 19.5 13.8 0.024 15.0 1.4 3.3 1 1 2 3 3 3 2 Propionyl-coenzyme A carboxylase BT domain Arm-DNA-bind_3 PF13356.6 gi|73668959|ref|YP_304974.1| - 0.0014 18.9 1.6 28 5.2 1.6 5.2 1 1 0 1 1 1 0 Arm DNA-binding domain DUF4915 PF16261.5 gi|73668959|ref|YP_304974.1| - 0.0041 16.4 0.3 2.5 7.3 0.0 3.8 2 1 2 4 4 4 1 Domain of unknown function (DUF4915) P_proprotein PF01483.20 gi|73668959|ref|YP_304974.1| - 0.0054 16.7 0.4 6.7 6.8 0.0 4.8 4 2 2 6 6 6 1 Proprotein convertase P-domain Peptidase_C80 PF11713.8 gi|73668959|ref|YP_304974.1| - 0.0056 16.9 1.7 14 5.9 0.0 4.1 2 1 0 3 3 3 0 Peptidase C80 family Str_synth PF03088.16 gi|73668959|ref|YP_304974.1| - 0.0063 16.6 0.2 0.71 10.0 0.0 3.7 1 1 4 5 5 5 1 Strictosidine synthase PD40 PF07676.12 gi|73668959|ref|YP_304974.1| - 0.015 15.3 0.0 2.8 8.0 0.0 2.5 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat DUF1513 PF07433.11 gi|73668959|ref|YP_304974.1| - 0.039 13.0 9.0 0.18 10.8 0.4 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF1513) Svf1 PF08622.10 gi|73668959|ref|YP_304974.1| - 0.048 13.7 5.0 31 4.6 0.2 4.0 1 1 3 4 4 4 0 Svf1-like N-terminal lipocalin domain DUF1905 PF08922.11 gi|73668959|ref|YP_304974.1| - 0.053 13.6 6.4 4.2 7.5 0.1 4.2 3 1 2 5 5 5 0 Domain of unknown function (DUF1905) Phytase-like PF13449.6 gi|73668959|ref|YP_304974.1| - 0.071 13.0 0.1 19 5.1 0.0 3.2 1 1 0 2 2 2 0 Esterase-like activity of phytase POLO_box PF00659.18 gi|73668959|ref|YP_304974.1| - 0.34 11.2 1.7 42 4.4 0.0 4.2 3 1 2 5 5 4 0 POLO box duplicated region PQQ PF01011.21 gi|73668959|ref|YP_304974.1| - 1.9 8.6 13.3 7.1 6.7 0.4 5.0 5 1 1 6 6 6 0 PQQ enzyme repeat DUF1935 PF09149.10 gi|73668959|ref|YP_304974.1| - 3.8 7.9 14.2 40 4.7 0.2 4.9 1 1 5 6 6 6 0 Domain of unknown function (DUF1935) Cation_efflux PF01545.21 gi|73668960|ref|YP_304975.1| - 4.3e-44 150.7 9.1 5.1e-44 150.4 9.1 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|73668960|ref|YP_304975.1| - 2.7e-22 78.7 0.7 5.4e-22 77.7 0.7 1.5 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Intg_mem_TP0381 PF09529.10 gi|73668960|ref|YP_304975.1| - 0.16 11.4 3.8 0.53 9.8 3.5 2.0 1 1 0 1 1 1 0 Integral membrane protein (intg_mem_TP0381) DUF4029 PF13221.6 gi|73668960|ref|YP_304975.1| - 2.2 9.0 7.1 0.14 12.8 1.1 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF4029) Chorismate_synt PF01264.21 gi|73668961|ref|YP_304976.1| - 4.4e-145 482.5 0.0 4.9e-145 482.3 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase Methyltransf_31 PF13847.6 gi|73668962|ref|YP_304977.1| - 6.7e-22 77.9 0.1 7.5e-22 77.8 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73668962|ref|YP_304977.1| - 2.1e-21 76.4 0.0 3e-21 75.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73668962|ref|YP_304977.1| - 2.5e-20 72.9 0.0 3.6e-20 72.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73668962|ref|YP_304977.1| - 2.2e-13 50.8 0.1 3.1e-13 50.3 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73668962|ref|YP_304977.1| - 9.9e-13 48.0 0.0 1.2e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|73668962|ref|YP_304977.1| - 8.5e-12 45.2 0.0 1e-11 45.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73668962|ref|YP_304977.1| - 1.1e-10 41.4 0.0 2e-10 40.5 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain TehB PF03848.14 gi|73668962|ref|YP_304977.1| - 4.9e-09 35.9 0.0 7.5e-09 35.3 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_18 PF12847.7 gi|73668962|ref|YP_304977.1| - 3.4e-08 33.5 0.1 6e-08 32.8 0.0 1.4 2 0 0 2 2 1 1 Methyltransferase domain PrmA PF06325.13 gi|73668962|ref|YP_304977.1| - 1.6e-06 27.7 0.0 2.2e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 gi|73668962|ref|YP_304977.1| - 4.3e-06 26.2 0.0 5.6e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 gi|73668962|ref|YP_304977.1| - 0.00016 21.4 0.0 0.00023 20.8 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.15 gi|73668962|ref|YP_304977.1| - 0.00027 20.9 0.0 0.0049 16.7 0.0 2.1 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_32 PF13679.6 gi|73668962|ref|YP_304977.1| - 0.00029 20.9 0.0 0.00088 19.3 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_20 PF12147.8 gi|73668962|ref|YP_304977.1| - 0.001 18.3 0.0 0.0015 17.7 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase UPF0020 PF01170.18 gi|73668962|ref|YP_304977.1| - 0.0011 18.7 0.0 0.0022 17.7 0.0 1.4 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 CheR PF01739.18 gi|73668962|ref|YP_304977.1| - 0.002 17.6 0.0 0.0079 15.7 0.0 1.8 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain Methyltransf_15 PF09445.10 gi|73668962|ref|YP_304977.1| - 0.0031 17.1 0.0 0.0037 16.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase NodS PF05401.11 gi|73668962|ref|YP_304977.1| - 0.0046 16.6 0.0 0.0065 16.1 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_4 PF02390.17 gi|73668962|ref|YP_304977.1| - 0.0058 16.1 0.0 0.041 13.4 0.0 2.0 2 0 0 2 2 2 1 Putative methyltransferase DREV PF05219.12 gi|73668962|ref|YP_304977.1| - 0.0068 15.5 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_9 PF08003.11 gi|73668962|ref|YP_304977.1| - 0.0091 14.9 0.2 0.02 13.9 0.1 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF1698) TPMT PF05724.11 gi|73668962|ref|YP_304977.1| - 0.011 15.4 0.0 0.026 14.2 0.0 1.5 1 1 1 2 2 2 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_29 PF03141.16 gi|73668962|ref|YP_304977.1| - 0.054 12.0 0.1 0.17 10.4 0.1 1.6 2 0 0 2 2 2 0 Putative S-adenosyl-L-methionine-dependent methyltransferase N6_N4_Mtase PF01555.18 gi|73668962|ref|YP_304977.1| - 0.063 13.0 0.5 0.48 10.1 0.1 2.1 2 0 0 2 2 2 0 DNA methylase N2227 PF07942.12 gi|73668962|ref|YP_304977.1| - 0.08 12.1 0.0 0.18 11.0 0.0 1.6 2 0 0 2 2 2 0 N2227-like protein DUF3663 PF12404.8 gi|73668962|ref|YP_304977.1| - 0.11 12.5 0.0 0.6 10.2 0.0 2.0 2 0 0 2 2 2 0 Peptidase UPF0239 PF06783.11 gi|73668963|ref|YP_304978.1| - 0.097 12.9 1.4 0.41 10.9 1.4 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0239) DUF3160 PF11369.8 gi|73668964|ref|YP_304979.1| - 1.6e-230 766.9 12.0 1.9e-230 766.7 12.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) ID PF18543.1 gi|73668965|ref|YP_304980.1| - 0.094 12.7 0.5 0.98 9.5 0.0 2.5 3 0 0 3 3 3 0 Intracellular delivery domain FixQ PF05545.11 gi|73668966|ref|YP_304981.1| - 2.8 8.0 9.5 2.7 8.0 0.1 3.2 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ DUF2964 PF11177.8 gi|73668967|ref|YP_304982.1| - 0.78 10.0 5.3 3.3 8.0 0.1 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF2964) EMP70 PF02990.16 gi|73668967|ref|YP_304982.1| - 1 7.9 9.6 0.14 10.8 2.4 2.0 1 1 1 2 2 2 0 Endomembrane protein 70 TadE PF07811.12 gi|73668967|ref|YP_304982.1| - 2.9 8.2 6.3 1.9 8.8 0.7 2.7 2 0 0 2 2 2 0 TadE-like protein ID PF18543.1 gi|73668968|ref|YP_304983.1| - 0.24 11.5 1.4 1.4 9.0 0.0 2.6 2 2 1 3 3 3 0 Intracellular delivery domain LolA_like PF17131.4 gi|73668969|ref|YP_304984.1| - 2.7e-11 43.5 0.0 5.8e-11 42.5 0.0 1.6 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein DUF4367 PF14285.6 gi|73668969|ref|YP_304984.1| - 1.6e-05 25.3 5.8 0.00065 20.1 0.2 3.2 3 1 0 3 3 3 2 Domain of unknown function (DUF4367) DUF2092 PF09865.9 gi|73668969|ref|YP_304984.1| - 7.2e-05 22.2 0.0 0.0034 16.7 0.0 2.2 1 1 0 1 1 1 1 Predicted periplasmic protein (DUF2092) DUF1329 PF07044.11 gi|73668969|ref|YP_304984.1| - 0.00034 20.0 0.0 0.00063 19.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1329) MucB_RseB PF03888.14 gi|73668969|ref|YP_304984.1| - 0.0028 17.2 0.0 0.0051 16.4 0.0 1.4 1 0 0 1 1 1 1 MucB/RseB N-terminal domain DUF1571 PF07608.11 gi|73668969|ref|YP_304984.1| - 0.014 14.9 0.0 0.027 13.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1571) LolA PF03548.15 gi|73668969|ref|YP_304984.1| - 0.023 14.4 0.0 3.3 7.4 0.0 2.3 2 0 0 2 2 2 0 Outer membrane lipoprotein carrier protein LolA ABC2_membrane_3 PF12698.7 gi|73668970|ref|YP_304985.1| - 0.013 14.6 0.1 0.013 14.6 0.1 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4131 PF13567.6 gi|73668971|ref|YP_304986.1| - 6.6 6.4 8.6 1.6 8.4 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) FeoA PF04023.14 gi|73668972|ref|YP_304987.1| - 4e-17 62.2 0.1 4.5e-17 62.1 0.1 1.0 1 0 0 1 1 1 1 FeoA domain FeoA PF04023.14 gi|73668973|ref|YP_304988.1| - 1.6e-17 63.5 0.0 1.7e-17 63.4 0.0 1.0 1 0 0 1 1 1 1 FeoA domain FeoB_N PF02421.18 gi|73668974|ref|YP_304989.1| - 2.9e-64 215.3 0.8 4.6e-64 214.7 0.8 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|73668974|ref|YP_304989.1| - 4.6e-43 146.0 19.7 8.5e-31 106.5 2.2 3.0 3 0 0 3 3 3 2 Nucleoside recognition FeoB_C PF07664.12 gi|73668974|ref|YP_304989.1| - 4e-21 74.4 0.6 4e-21 74.4 0.6 2.6 3 0 0 3 3 3 1 Ferrous iron transport protein B C terminus FeoB_Cyto PF17910.1 gi|73668974|ref|YP_304989.1| - 7.3e-20 71.3 5.6 6.5e-19 68.3 2.5 2.3 2 0 0 2 2 2 1 FeoB cytosolic helical domain MMR_HSR1 PF01926.23 gi|73668974|ref|YP_304989.1| - 2.5e-17 63.0 0.1 4.7e-17 62.1 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 gi|73668974|ref|YP_304989.1| - 0.012 15.1 0.0 0.023 14.1 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Dynamin_N PF00350.23 gi|73668974|ref|YP_304989.1| - 0.02 15.0 0.5 8.7 6.4 0.0 2.6 3 0 0 3 3 3 0 Dynamin family NTPase_1 PF03266.15 gi|73668974|ref|YP_304989.1| - 0.12 12.2 0.2 0.24 11.3 0.2 1.4 1 0 0 1 1 1 0 NTPase Yip1 PF04893.17 gi|73668975|ref|YP_304990.1| - 0.0019 17.9 9.3 0.0026 17.5 9.3 1.2 1 0 0 1 1 1 1 Yip1 domain DUF308 PF03729.13 gi|73668975|ref|YP_304990.1| - 0.53 10.7 11.1 7.6 6.9 5.1 2.8 2 1 1 3 3 3 0 Short repeat of unknown function (DUF308) DUF3899 PF13038.6 gi|73668975|ref|YP_304990.1| - 0.59 10.7 0.0 0.59 10.7 0.0 2.8 3 1 1 4 4 4 0 Domain of unknown function (DUF3899) TssN PF17555.2 gi|73668975|ref|YP_304990.1| - 1.1 8.6 4.5 2.1 7.7 4.5 1.5 1 1 0 1 1 1 0 Type VI secretion system, TssN FeoC PF09012.10 gi|73668976|ref|YP_304991.1| - 8.8e-17 61.0 0.8 1.3e-16 60.4 0.8 1.4 1 0 0 1 1 1 1 FeoC like transcriptional regulator Cas_Cas4 PF01930.17 gi|73668976|ref|YP_304991.1| - 0.0016 18.5 0.2 0.0024 18.0 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF83 MarR_2 PF12802.7 gi|73668976|ref|YP_304991.1| - 0.0048 16.8 0.0 0.0067 16.3 0.0 1.2 1 0 0 1 1 1 1 MarR family DUF4423 PF14394.6 gi|73668976|ref|YP_304991.1| - 0.0055 16.4 0.0 0.0067 16.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) DUF2250 PF10007.9 gi|73668976|ref|YP_304991.1| - 0.0092 16.1 0.3 0.064 13.4 0.1 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) TrmB PF01978.19 gi|73668976|ref|YP_304991.1| - 0.037 13.9 0.1 0.15 12.0 0.1 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF1495 PF07381.11 gi|73668976|ref|YP_304991.1| - 0.053 13.3 0.2 5.3 6.9 0.0 2.2 2 0 0 2 2 2 0 Winged helix DNA-binding domain (DUF1495) FtsK_gamma PF09397.10 gi|73668976|ref|YP_304991.1| - 0.058 13.2 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Ftsk gamma domain Sigma70_r1_1 PF03979.14 gi|73668976|ref|YP_304991.1| - 0.059 13.4 0.4 0.095 12.8 0.4 1.3 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 HTH_34 PF13601.6 gi|73668976|ref|YP_304991.1| - 0.089 13.0 0.7 5.2 7.3 0.1 2.3 2 0 0 2 2 2 0 Winged helix DNA-binding domain FaeA PF04703.12 gi|73668976|ref|YP_304991.1| - 0.099 13.0 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 FaeA-like protein Fe_dep_repress PF01325.19 gi|73668976|ref|YP_304991.1| - 0.13 12.5 0.7 3.3 8.0 0.3 2.2 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain TFIIE_beta PF02186.15 gi|73668976|ref|YP_304991.1| - 0.14 12.5 0.1 0.19 12.0 0.1 1.2 1 0 0 1 1 1 0 TFIIE beta subunit core domain DDE_Tnp_ISL3 PF01610.17 gi|73668977|ref|YP_304992.1| - 7.6e-06 25.8 0.0 9e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 Transposase Fe_dep_repress PF01325.19 gi|73668979|ref|YP_304994.1| - 7.3e-19 67.7 0.6 1.1e-18 67.1 0.6 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|73668979|ref|YP_304994.1| - 3.8e-14 52.5 0.5 7e-14 51.7 0.5 1.4 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_24 PF13412.6 gi|73668979|ref|YP_304994.1| - 9.1e-05 21.9 0.0 0.00015 21.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_micro PF17007.5 gi|73668979|ref|YP_304994.1| - 0.00011 21.1 0.8 0.00021 20.2 0.2 1.6 1 1 0 2 2 2 1 HTH-like LexA_DNA_bind PF01726.16 gi|73668979|ref|YP_304994.1| - 0.00012 21.8 0.0 0.00022 20.9 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain MarR PF01047.22 gi|73668979|ref|YP_304994.1| - 0.00019 21.3 0.0 0.00041 20.2 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|73668979|ref|YP_304994.1| - 0.00085 19.1 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|73668979|ref|YP_304994.1| - 0.0011 18.8 0.0 0.0018 18.1 0.0 1.3 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|73668979|ref|YP_304994.1| - 0.0021 18.4 0.0 0.0032 17.8 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_12 PF08461.10 gi|73668979|ref|YP_304994.1| - 0.0037 17.2 0.3 0.014 15.3 0.3 2.0 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_45 PF14947.6 gi|73668979|ref|YP_304994.1| - 0.0038 17.2 1.2 0.0064 16.5 0.9 1.5 1 1 1 2 2 2 1 Winged helix-turn-helix Penicillinase_R PF03965.16 gi|73668979|ref|YP_304994.1| - 0.0041 17.5 0.0 0.013 15.8 0.0 1.8 1 1 0 1 1 1 1 Penicillinase repressor TrmB PF01978.19 gi|73668979|ref|YP_304994.1| - 0.0079 16.1 0.1 0.013 15.3 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_40 PF14493.6 gi|73668979|ref|YP_304994.1| - 0.014 15.9 0.1 0.04 14.4 0.0 1.8 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|73668979|ref|YP_304994.1| - 0.015 15.1 0.0 0.032 14.0 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_6 PF01418.17 gi|73668979|ref|YP_304994.1| - 0.046 13.7 0.0 0.081 12.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family FeoC PF09012.10 gi|73668979|ref|YP_304994.1| - 0.063 13.4 0.0 0.16 12.1 0.0 1.7 1 1 1 2 2 2 0 FeoC like transcriptional regulator HTH_Crp_2 PF13545.6 gi|73668979|ref|YP_304994.1| - 0.084 12.9 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Mrr_N PF14338.6 gi|73668979|ref|YP_304994.1| - 0.098 12.8 0.1 0.21 11.7 0.1 1.5 1 0 0 1 1 1 0 Mrr N-terminal domain CENP-B_N PF04218.13 gi|73668979|ref|YP_304994.1| - 0.1 12.2 0.0 0.19 11.4 0.0 1.5 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain HTH_DeoR PF08220.12 gi|73668979|ref|YP_304994.1| - 0.12 12.2 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Radical_SAM PF04055.21 gi|73668980|ref|YP_304995.1| - 7.7e-26 91.5 0.2 6.4e-25 88.4 0.0 2.5 1 1 2 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73668980|ref|YP_304995.1| - 6.4e-10 39.4 0.0 1.3e-09 38.4 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|73668980|ref|YP_304995.1| - 1.4e-08 35.1 1.7 2.8e-08 34.1 1.7 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.6 gi|73668980|ref|YP_304995.1| - 1.4e-06 28.4 0.0 3.8e-06 27.0 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain AsnC_trans_reg2 PF17805.1 gi|73668981|ref|YP_304996.1| - 3.1e-23 81.7 0.0 8.5e-23 80.3 0.0 1.7 2 0 0 2 2 2 1 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|73668981|ref|YP_304996.1| - 5.5e-11 42.1 0.0 1.2e-10 41.1 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|73668981|ref|YP_304996.1| - 0.00011 21.7 8.1 0.00092 18.7 4.0 3.1 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 gi|73668981|ref|YP_304996.1| - 0.0051 16.6 0.2 0.013 15.3 0.2 1.7 1 1 0 1 1 1 1 LexA DNA binding domain CinA_KH PF18146.1 gi|73668981|ref|YP_304996.1| - 0.0074 16.4 0.1 4.3 7.6 0.0 3.0 2 1 1 3 3 3 1 Damage-inducible protein CinA KH domain 3H PF02829.14 gi|73668981|ref|YP_304996.1| - 0.027 14.8 0.0 0.072 13.4 0.0 1.7 1 0 0 1 1 1 0 3H domain HTH_20 PF12840.7 gi|73668981|ref|YP_304996.1| - 0.059 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 gi|73668981|ref|YP_304996.1| - 0.11 12.4 0.4 0.34 10.8 0.2 1.9 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB AsnC_trans_reg2 PF17805.1 gi|73668982|ref|YP_304997.1| - 5.6e-33 112.9 0.0 1.1e-32 112.0 0.0 1.5 2 0 0 2 2 2 1 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|73668982|ref|YP_304997.1| - 2.3e-05 24.1 0.0 5.3e-05 23.0 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|73668982|ref|YP_304997.1| - 0.003 17.1 0.3 0.23 11.1 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|73668982|ref|YP_304997.1| - 0.058 13.3 0.0 0.095 12.6 0.0 1.3 1 0 0 1 1 1 0 MarR family DDRGK PF09756.9 gi|73668982|ref|YP_304997.1| - 0.059 13.0 0.0 0.087 12.4 0.0 1.1 1 0 0 1 1 1 0 DDRGK domain AsnC_trans_reg PF01037.21 gi|73668982|ref|YP_304997.1| - 0.074 13.0 0.1 0.46 10.5 0.0 2.0 2 0 0 2 2 2 0 Lrp/AsnC ligand binding domain HTH_Tnp_ISL3 PF13542.6 gi|73668982|ref|YP_304997.1| - 0.12 11.8 0.0 0.43 10.0 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 FaeA PF04703.12 gi|73668982|ref|YP_304997.1| - 0.16 12.4 0.0 0.58 10.6 0.0 1.8 2 0 0 2 2 2 0 FaeA-like protein NAD_binding_7 PF13241.6 gi|73668983|ref|YP_304998.1| - 2.1e-18 66.7 0.0 4.6e-18 65.6 0.0 1.6 2 0 0 2 2 2 1 Putative NAD(P)-binding Sirohm_synth_M PF14824.6 gi|73668983|ref|YP_304998.1| - 0.00086 18.7 0.0 0.0015 17.9 0.0 1.4 1 0 0 1 1 1 1 Sirohaem biosynthesis protein central Sacchrp_dh_NADP PF03435.18 gi|73668983|ref|YP_304998.1| - 0.0078 16.5 0.0 0.039 14.2 0.0 2.0 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 gi|73668984|ref|YP_304999.1| - 2.7e-42 144.1 1.1 2.7e-42 144.1 1.1 1.9 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GlutR_N PF05201.15 gi|73668984|ref|YP_304999.1| - 4.8e-37 127.0 0.0 1.1e-36 125.8 0.0 1.6 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.20 gi|73668984|ref|YP_304999.1| - 1.1e-18 67.4 1.3 2.9e-18 66.1 1.3 1.8 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.17 gi|73668984|ref|YP_304999.1| - 2.3e-07 31.3 1.5 1e-06 29.2 0.5 2.7 3 0 0 3 3 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|73668984|ref|YP_304999.1| - 3.8e-06 26.4 0.2 7.8e-06 25.4 0.2 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Glu_dehyd_C PF16912.5 gi|73668984|ref|YP_304999.1| - 6.6e-06 25.8 0.3 1.6e-05 24.5 0.3 1.6 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus Sacchrp_dh_NADP PF03435.18 gi|73668984|ref|YP_304999.1| - 0.0001 22.6 4.1 0.00016 22.0 0.3 2.9 2 1 0 3 3 3 1 Saccharopine dehydrogenase NADP binding domain OCD_Mu_crystall PF02423.15 gi|73668984|ref|YP_304999.1| - 0.00069 18.6 0.3 0.0013 17.8 0.3 1.4 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family THF_DHG_CYH_C PF02882.19 gi|73668984|ref|YP_304999.1| - 0.0019 17.5 0.9 0.044 13.1 0.2 2.8 3 1 0 3 3 3 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_7 PF13241.6 gi|73668984|ref|YP_304999.1| - 0.0049 17.3 3.9 0.022 15.2 3.9 2.3 1 1 0 1 1 1 1 Putative NAD(P)-binding ThiF PF00899.21 gi|73668984|ref|YP_304999.1| - 0.0052 16.2 0.6 0.0052 16.2 0.6 2.4 3 0 0 3 3 3 1 ThiF family Pyr_redox_2 PF07992.14 gi|73668984|ref|YP_304999.1| - 0.023 13.9 1.0 0.052 12.8 0.5 1.7 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase IlvN PF07991.12 gi|73668984|ref|YP_304999.1| - 0.036 13.6 0.3 0.079 12.5 0.3 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 gi|73668984|ref|YP_304999.1| - 0.058 13.7 1.3 0.15 12.3 0.5 2.2 1 1 0 1 1 1 0 TrkA-N domain adh_short PF00106.25 gi|73668984|ref|YP_304999.1| - 0.071 12.6 0.4 0.18 11.2 0.4 1.8 1 0 0 1 1 1 0 short chain dehydrogenase AdoHcyase_NAD PF00670.21 gi|73668984|ref|YP_304999.1| - 0.098 12.7 5.1 0.06 13.4 2.0 2.2 2 1 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Sld5 PF05916.11 gi|73668984|ref|YP_304999.1| - 2.5 8.6 5.8 3.3e+02 1.8 5.8 2.4 1 1 0 1 1 1 0 GINS complex protein ALAD PF00490.21 gi|73668985|ref|YP_305000.1| - 3.2e-146 486.5 1.2 3.6e-146 486.3 1.2 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase SpoVAE PF14097.6 gi|73668985|ref|YP_305000.1| - 0.0039 16.9 0.3 0.0065 16.1 0.3 1.3 1 0 0 1 1 1 1 Stage V sporulation protein AE1 Aminotran_3 PF00202.21 gi|73668986|ref|YP_305001.1| - 2.2e-68 230.8 0.0 2.8e-68 230.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Porphobil_deam PF01379.20 gi|73668987|ref|YP_305002.1| - 1.1e-68 230.8 0.0 1.5e-68 230.3 0.0 1.2 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|73668987|ref|YP_305002.1| - 1.5e-12 47.7 0.1 5e-12 46.0 0.0 1.9 1 1 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain DHO_dh PF01180.21 gi|73668988|ref|YP_305003.1| - 1.7e-64 217.9 0.4 1.9e-64 217.7 0.4 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|73668988|ref|YP_305003.1| - 4e-12 45.8 0.2 3.9e-06 26.2 0.0 2.0 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|73668988|ref|YP_305003.1| - 0.00017 21.1 0.4 0.00038 20.0 0.1 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein NMO PF03060.15 gi|73668988|ref|YP_305003.1| - 0.00024 20.6 4.9 0.00024 20.6 4.9 1.9 2 1 0 2 2 2 1 Nitronate monooxygenase DUF2108 PF09881.9 gi|73668988|ref|YP_305003.1| - 0.031 14.2 1.2 0.045 13.7 0.1 1.8 2 0 0 2 2 2 0 Predicted membrane protein (DUF2108) DUF561 PF04481.12 gi|73668988|ref|YP_305003.1| - 0.04 13.1 1.0 0.053 12.7 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF561) IMPDH PF00478.25 gi|73668988|ref|YP_305003.1| - 0.095 11.7 3.4 0.16 10.9 3.4 1.5 1 1 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain ThiG PF05690.14 gi|73668988|ref|YP_305003.1| - 0.61 9.3 4.8 0.14 11.4 0.3 2.1 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG DHODB_Fe-S_bind PF10418.9 gi|73668989|ref|YP_305004.1| - 6.4e-11 41.9 5.6 7.6e-11 41.6 4.7 1.6 2 0 0 2 2 2 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|73668989|ref|YP_305004.1| - 3.9e-06 27.5 0.0 1e-05 26.1 0.0 1.7 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|73668989|ref|YP_305004.1| - 0.074 13.4 0.0 0.9 9.9 0.0 2.3 1 1 0 1 1 1 0 Oxidoreductase FAD-binding domain LAMTOR5 PF16672.5 gi|73668989|ref|YP_305004.1| - 0.11 12.5 0.5 0.25 11.3 0.5 1.6 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 FAA_hydrolase PF01557.18 gi|73668990|ref|YP_305005.1| - 7.9e-67 225.1 0.0 9.3e-67 224.9 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.9 gi|73668990|ref|YP_305005.1| - 0.014 16.3 0.0 0.035 15.0 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF2437) HTH_5 PF01022.20 gi|73668991|ref|YP_305006.1| - 0.028 14.3 0.5 0.053 13.4 0.5 1.5 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|73668991|ref|YP_305006.1| - 0.039 13.8 0.2 0.061 13.2 0.1 1.3 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB RepL PF05732.11 gi|73668991|ref|YP_305006.1| - 0.07 12.6 0.1 0.14 11.6 0.1 1.6 1 1 0 1 1 1 0 Firmicute plasmid replication protein (RepL) tRNA-synt_1c PF00749.21 gi|73668992|ref|YP_305007.1| - 2.1e-63 214.1 0.0 2.5e-63 213.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|73668992|ref|YP_305007.1| - 1.5e-27 96.6 0.1 4.9e-27 94.9 0.0 2.0 2 1 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain PKD PF00801.20 gi|73668993|ref|YP_305008.1| - 2e-56 187.7 22.7 1.1e-14 54.1 1.0 4.5 4 0 0 4 4 4 4 PKD domain MG2 PF01835.19 gi|73668993|ref|YP_305008.1| - 4e-05 24.0 6.7 2.1 8.9 0.2 4.5 1 1 3 4 4 4 2 MG2 domain ChitinaseA_N PF08329.10 gi|73668993|ref|YP_305008.1| - 0.00066 19.3 1.8 4.3 7.0 0.0 4.4 3 1 1 4 4 4 2 Chitinase A, N-terminal domain PKD_3 PF16820.5 gi|73668993|ref|YP_305008.1| - 0.0015 18.2 3.1 0.17 11.6 0.2 3.8 4 0 0 4 4 4 1 PKD-like domain Phage_Cox PF10743.9 gi|73668993|ref|YP_305008.1| - 0.0062 16.6 0.2 4.6 7.4 0.1 2.6 2 0 0 2 2 2 2 Regulatory phage protein cox Big_4 PF07532.11 gi|73668993|ref|YP_305008.1| - 0.0084 15.8 7.5 22 4.9 0.1 4.9 4 0 0 4 4 4 2 Bacterial Ig-like domain (group 4) He_PIG PF05345.12 gi|73668993|ref|YP_305008.1| - 7.7 6.8 21.6 4.1 7.7 0.4 6.0 5 2 0 5 5 5 0 Putative Ig domain PKD PF00801.20 gi|73668994|ref|YP_305009.1| - 5.1e-60 199.2 21.9 4.4e-15 55.3 0.7 4.5 4 0 0 4 4 4 4 PKD domain PKD_3 PF16820.5 gi|73668994|ref|YP_305009.1| - 1.5e-06 27.8 6.0 0.29 10.9 0.1 4.6 4 0 0 4 4 4 3 PKD-like domain ChitinaseA_N PF08329.10 gi|73668994|ref|YP_305009.1| - 8e-06 25.5 0.4 1.7 8.3 0.0 4.4 4 0 0 4 4 4 2 Chitinase A, N-terminal domain MG2 PF01835.19 gi|73668994|ref|YP_305009.1| - 0.00014 22.3 9.7 8.2 7.0 0.1 4.7 2 1 3 5 5 5 3 MG2 domain HA1 PF18239.1 gi|73668994|ref|YP_305009.1| - 0.0027 17.5 1.2 8.4 6.3 0.0 3.8 2 1 2 4 4 4 2 Hemagglutinin I Big_4 PF07532.11 gi|73668994|ref|YP_305009.1| - 0.0033 17.1 7.8 4 7.2 0.1 5.0 4 0 0 4 4 4 1 Bacterial Ig-like domain (group 4) Kelch_3 PF13415.6 gi|73668994|ref|YP_305009.1| - 0.0048 17.2 0.1 0.52 10.7 0.0 3.2 2 0 0 2 2 2 1 Galactose oxidase, central domain DUF5011 PF16403.5 gi|73668994|ref|YP_305009.1| - 0.0056 16.8 21.7 0.47 10.6 0.2 5.1 5 0 0 5 5 5 3 Domain of unknown function (DUF5011) Phage_XkdX PF09693.10 gi|73668994|ref|YP_305009.1| - 0.08 13.0 3.5 1.2 9.2 0.2 2.7 2 0 0 2 2 2 0 Phage uncharacterised protein (Phage_XkdX) Kelch_4 PF13418.6 gi|73668994|ref|YP_305009.1| - 0.088 12.8 2.9 16 5.6 0.0 4.8 4 0 0 4 4 4 0 Galactose oxidase, central domain SoxZ PF08770.11 gi|73668994|ref|YP_305009.1| - 0.21 11.4 1.9 72 3.2 0.1 3.8 3 0 0 3 3 3 0 Sulphur oxidation protein SoxZ He_PIG PF05345.12 gi|73668994|ref|YP_305009.1| - 7.2 6.9 26.2 13 6.1 0.2 6.3 6 1 0 6 6 6 0 Putative Ig domain PKD PF00801.20 gi|73668995|ref|YP_305010.1| - 4.1e-60 199.6 22.7 2.3e-15 56.2 0.5 5.2 5 0 0 5 5 5 4 PKD domain ChitinaseA_N PF08329.10 gi|73668995|ref|YP_305010.1| - 2.1e-06 27.4 2.7 0.47 10.1 0.0 4.8 4 1 0 4 4 4 2 Chitinase A, N-terminal domain MG2 PF01835.19 gi|73668995|ref|YP_305010.1| - 2.8e-06 27.7 9.7 0.88 10.1 0.1 4.5 1 1 3 4 4 4 3 MG2 domain PKD_3 PF16820.5 gi|73668995|ref|YP_305010.1| - 0.00049 19.8 6.2 0.28 11.0 0.1 4.5 5 0 0 5 5 5 2 PKD-like domain DUF4625 PF15418.6 gi|73668995|ref|YP_305010.1| - 0.00089 19.5 1.3 46 4.3 0.0 6.1 7 0 0 7 7 7 0 Domain of unknown function (DUF4625) Big_4 PF07532.11 gi|73668995|ref|YP_305010.1| - 0.0034 17.1 9.2 6.7 6.5 0.1 5.0 4 0 0 4 4 4 1 Bacterial Ig-like domain (group 4) SoxZ PF08770.11 gi|73668995|ref|YP_305010.1| - 0.0093 15.7 3.1 7.1 6.5 0.0 3.8 3 0 0 3 3 3 1 Sulphur oxidation protein SoxZ DUF5011 PF16403.5 gi|73668995|ref|YP_305010.1| - 0.022 14.9 24.8 0.42 10.8 0.6 4.8 4 0 0 4 4 4 0 Domain of unknown function (DUF5011) Kelch_4 PF13418.6 gi|73668995|ref|YP_305010.1| - 0.046 13.7 2.7 16 5.6 0.0 4.9 5 0 0 5 5 4 0 Galactose oxidase, central domain DUF3324 PF11797.8 gi|73668995|ref|YP_305010.1| - 0.058 13.4 17.1 1.1 9.3 0.1 5.8 4 2 1 5 5 5 0 Protein of unknown function C-terminal (DUF3324) ribosomal_L24 PF17136.4 gi|73668995|ref|YP_305010.1| - 0.064 13.7 0.1 18 5.8 0.0 4.2 6 0 0 6 6 5 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 Kelch_3 PF13415.6 gi|73668995|ref|YP_305010.1| - 0.11 12.8 8.5 18 5.7 0.1 5.0 5 0 0 5 5 5 0 Galactose oxidase, central domain FeThRed_A PF02941.15 gi|73668995|ref|YP_305010.1| - 0.18 12.0 1.1 1.4e+02 2.8 0.0 4.0 4 1 0 4 4 4 0 Ferredoxin thioredoxin reductase variable alpha chain DUF5074 PF16819.5 gi|73668995|ref|YP_305010.1| - 1.3 9.0 11.5 0.27 11.3 0.6 4.3 2 2 2 4 4 4 0 Domain of unknown function (DUF5074) Cadherin PF00028.17 gi|73668995|ref|YP_305010.1| - 2.9 8.4 5.1 2.7e+02 2.1 0.1 5.2 6 0 0 6 6 6 0 Cadherin domain bMG6 PF17962.1 gi|73668995|ref|YP_305010.1| - 2.9 8.1 10.8 15 5.8 0.2 4.7 2 1 4 6 6 6 0 Bacterial macroglobulin domain 6 He_PIG PF05345.12 gi|73668995|ref|YP_305010.1| - 3.4 7.9 26.6 13 6.1 0.2 6.8 6 1 0 6 6 6 0 Putative Ig domain PKD PF00801.20 gi|73668996|ref|YP_305011.1| - 5.9e-45 151.0 13.3 4.7e-15 55.2 0.3 3.3 3 0 0 3 3 3 3 PKD domain ChitinaseA_N PF08329.10 gi|73668996|ref|YP_305011.1| - 0.00035 20.2 0.0 3.1 7.4 0.0 3.5 3 0 0 3 3 3 2 Chitinase A, N-terminal domain MG2 PF01835.19 gi|73668996|ref|YP_305011.1| - 0.00046 20.6 4.3 5 7.7 0.1 3.7 1 1 2 3 3 3 3 MG2 domain DUF5011 PF16403.5 gi|73668996|ref|YP_305011.1| - 0.004 17.2 18.7 0.21 11.7 0.3 3.9 4 0 0 4 4 3 3 Domain of unknown function (DUF5011) Big_4 PF07532.11 gi|73668996|ref|YP_305011.1| - 0.0053 16.5 3.0 4.6 7.1 0.1 4.0 3 0 0 3 3 3 1 Bacterial Ig-like domain (group 4) Kelch_3 PF13415.6 gi|73668996|ref|YP_305011.1| - 0.0067 16.7 0.3 12 6.4 0.1 3.7 3 0 0 3 3 3 1 Galactose oxidase, central domain DUF3324 PF11797.8 gi|73668996|ref|YP_305011.1| - 0.0073 16.3 5.6 2 8.4 0.1 3.7 3 0 0 3 3 3 1 Protein of unknown function C-terminal (DUF3324) PKD_3 PF16820.5 gi|73668996|ref|YP_305011.1| - 0.01 15.6 0.8 16 5.3 0.0 3.4 3 0 0 3 3 3 0 PKD-like domain SoxZ PF08770.11 gi|73668996|ref|YP_305011.1| - 0.032 14.0 1.7 36 4.2 0.1 3.7 3 0 0 3 3 3 0 Sulphur oxidation protein SoxZ MCR_beta_N PF02783.15 gi|73668996|ref|YP_305011.1| - 0.04 13.5 0.0 21 4.7 0.0 3.0 3 0 0 3 3 3 0 Methyl-coenzyme M reductase beta subunit, N-terminal domain ribosomal_L24 PF17136.4 gi|73668996|ref|YP_305011.1| - 0.069 13.6 0.1 21 5.6 0.0 3.8 4 0 0 4 4 4 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 DUF4625 PF15418.6 gi|73668996|ref|YP_305011.1| - 0.14 12.4 2.3 35 4.6 0.0 3.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4625) DUF2381 PF09544.10 gi|73668996|ref|YP_305011.1| - 0.26 10.8 0.1 66 2.9 0.0 3.2 2 1 2 4 4 4 0 Protein of unknown function (DUF2381) Pectate_lyase_3 PF12708.7 gi|73668997|ref|YP_305012.1| - 6.3e-13 49.1 8.3 6.3e-13 49.1 8.3 2.0 1 1 1 2 2 2 1 Pectate lyase superfamily protein Beta_helix PF13229.6 gi|73668997|ref|YP_305012.1| - 1.1e-12 48.1 17.9 1.1e-12 48.1 17.9 1.8 1 1 1 2 2 2 1 Right handed beta helix region NosD PF05048.13 gi|73668997|ref|YP_305012.1| - 7.2e-06 25.4 5.0 7.2e-06 25.4 5.0 1.6 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Phage_integrase PF00589.22 gi|73668997|ref|YP_305012.1| - 0.038 13.8 0.0 9.8 5.9 0.0 2.2 2 0 0 2 2 2 0 Phage integrase family LdpA_C PF12617.8 gi|73668997|ref|YP_305012.1| - 0.093 12.3 0.3 0.22 11.1 0.3 1.6 1 0 0 1 1 1 0 Iron-Sulfur binding protein C terminal Pectate_lyase_3 PF12708.7 gi|73668998|ref|YP_305013.1| - 1.3e-12 48.1 8.8 4.4e-12 46.3 8.7 2.0 1 1 0 1 1 1 1 Pectate lyase superfamily protein Beta_helix PF13229.6 gi|73668998|ref|YP_305013.1| - 2e-12 47.2 15.2 2e-12 47.2 15.2 2.2 2 0 0 2 2 2 1 Right handed beta helix region Phage_integrase PF00589.22 gi|73668998|ref|YP_305013.1| - 0.13 12.0 0.0 4.9 6.9 0.0 2.2 1 1 0 2 2 2 0 Phage integrase family PKD PF00801.20 gi|73668999|ref|YP_305014.1| - 6.1e-61 202.2 23.1 1.9e-15 56.4 0.9 4.7 4 0 0 4 4 4 4 PKD domain ChitinaseA_N PF08329.10 gi|73668999|ref|YP_305014.1| - 3.7e-08 33.1 1.1 0.69 9.6 0.0 4.5 4 0 0 4 4 4 3 Chitinase A, N-terminal domain MG2 PF01835.19 gi|73668999|ref|YP_305014.1| - 5.9e-07 29.9 11.2 0.83 10.2 0.2 4.9 1 1 3 4 4 4 4 MG2 domain PKD_3 PF16820.5 gi|73668999|ref|YP_305014.1| - 4.8e-05 23.0 11.5 0.09 12.5 0.1 5.8 6 0 0 6 6 6 2 PKD-like domain Kelch_4 PF13418.6 gi|73668999|ref|YP_305014.1| - 0.0039 17.2 3.3 49 4.0 0.0 5.5 5 0 0 5 5 5 0 Galactose oxidase, central domain MCR_beta_N PF02783.15 gi|73668999|ref|YP_305014.1| - 0.028 14.1 1.0 44 3.6 0.0 3.6 2 1 2 4 4 4 0 Methyl-coenzyme M reductase beta subunit, N-terminal domain DUF3324 PF11797.8 gi|73668999|ref|YP_305014.1| - 0.029 14.4 13.7 6.2 6.8 0.0 5.3 4 1 0 4 4 4 0 Protein of unknown function C-terminal (DUF3324) DUF5011 PF16403.5 gi|73668999|ref|YP_305014.1| - 0.032 14.4 26.6 0.66 10.1 0.7 5.4 5 0 0 5 5 5 0 Domain of unknown function (DUF5011) Big_4 PF07532.11 gi|73668999|ref|YP_305014.1| - 0.05 13.3 14.6 3.7 7.4 0.1 5.3 4 1 0 4 4 4 0 Bacterial Ig-like domain (group 4) SoxZ PF08770.11 gi|73668999|ref|YP_305014.1| - 0.34 10.7 4.2 9.2 6.1 0.1 3.7 4 0 0 4 4 4 0 Sulphur oxidation protein SoxZ PKD PF00801.20 gi|73669000|ref|YP_305015.1| - 4e-60 199.6 22.1 6.6e-15 54.7 1.0 4.4 4 0 0 4 4 4 4 PKD domain DUF5050 PF16472.5 gi|73669000|ref|YP_305015.1| - 3e-10 39.8 26.3 4.1e-06 26.2 7.4 2.5 1 1 1 2 2 2 2 Domain of unknown function (DUF5050) Kelch_4 PF13418.6 gi|73669000|ref|YP_305015.1| - 3.3e-06 27.0 2.0 16 5.6 0.0 6.6 6 0 0 6 6 6 0 Galactose oxidase, central domain MG2 PF01835.19 gi|73669000|ref|YP_305015.1| - 3.5e-06 27.4 11.9 1.5 9.3 0.2 4.9 3 1 2 5 5 5 4 MG2 domain ChitinaseA_N PF08329.10 gi|73669000|ref|YP_305015.1| - 1.8e-05 24.4 1.1 2.2 8.0 0.0 4.5 4 0 0 4 4 4 2 Chitinase A, N-terminal domain PKD_3 PF16820.5 gi|73669000|ref|YP_305015.1| - 0.00019 21.1 8.4 0.11 12.3 0.2 5.2 5 1 0 5 5 5 1 PKD-like domain MCR_beta_N PF02783.15 gi|73669000|ref|YP_305015.1| - 0.001 18.7 0.8 6.7 6.3 0.0 3.7 2 1 2 4 4 4 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain Pectate_lyase22 PF14583.6 gi|73669000|ref|YP_305015.1| - 0.0016 17.2 1.5 2.9 6.5 0.0 4.2 1 1 3 5 5 5 1 Oligogalacturonate lyase Big_4 PF07532.11 gi|73669000|ref|YP_305015.1| - 0.0033 17.1 12.7 4 7.2 0.1 5.6 5 0 0 5 5 5 2 Bacterial Ig-like domain (group 4) Kelch_3 PF13415.6 gi|73669000|ref|YP_305015.1| - 0.0099 16.2 4.7 1.1e+02 3.3 0.0 6.1 5 1 1 6 6 6 0 Galactose oxidase, central domain HCNGP PF07818.13 gi|73669000|ref|YP_305015.1| - 0.016 15.9 0.1 3.9 8.2 0.0 2.8 2 0 0 2 2 2 0 HCNGP-like protein DUF3324 PF11797.8 gi|73669000|ref|YP_305015.1| - 0.1 12.6 17.0 3.3 7.7 0.1 5.6 5 1 1 6 6 6 0 Protein of unknown function C-terminal (DUF3324) DUF2381 PF09544.10 gi|73669000|ref|YP_305015.1| - 0.11 12.0 0.1 45 3.4 0.0 3.3 1 1 2 4 4 4 0 Protein of unknown function (DUF2381) SoxZ PF08770.11 gi|73669000|ref|YP_305015.1| - 0.14 12.0 1.0 10 6.0 0.1 3.4 3 0 0 3 3 3 0 Sulphur oxidation protein SoxZ ribosomal_L24 PF17136.4 gi|73669000|ref|YP_305015.1| - 0.14 12.6 0.1 24 5.4 0.0 3.8 4 0 0 4 4 3 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 Phage_Gp19 PF09355.10 gi|73669000|ref|YP_305015.1| - 0.2 12.1 2.0 44 4.5 0.0 3.3 3 0 0 3 3 3 0 Phage protein Gp19/Gp15/Gp42 DUF5074 PF16819.5 gi|73669000|ref|YP_305015.1| - 0.28 11.2 20.5 2.6 8.1 1.4 5.7 1 1 4 5 5 5 0 Domain of unknown function (DUF5074) MBG PF17883.1 gi|73669000|ref|YP_305015.1| - 1.8 9.2 47.3 1.5 9.5 1.4 6.9 4 2 2 7 7 6 0 MBG domain He_PIG PF05345.12 gi|73669000|ref|YP_305015.1| - 3 8.1 26.9 15 5.8 0.1 6.5 6 1 0 6 6 6 0 Putative Ig domain Cadherin PF00028.17 gi|73669000|ref|YP_305015.1| - 9.3 6.8 7.3 1.2e+02 3.2 0.1 5.1 6 0 0 6 6 5 0 Cadherin domain Pyrophosphatase PF00719.19 gi|73669001|ref|YP_305016.1| - 1.3e-52 177.8 0.4 1.5e-52 177.6 0.4 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase T4SS PF07996.11 gi|73669002|ref|YP_305017.1| - 0.00038 20.9 6.0 0.02 15.3 6.0 2.2 1 1 0 1 1 1 1 Type IV secretion system proteins DUF2397 PF09660.10 gi|73669002|ref|YP_305017.1| - 0.0012 17.8 0.8 0.0038 16.2 0.2 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2397) bZIP_C PF12498.8 gi|73669002|ref|YP_305017.1| - 0.018 16.0 1.6 0.018 16.0 1.6 2.7 1 1 2 3 3 3 0 Basic leucine-zipper C terminal Dynactin_p22 PF07426.11 gi|73669002|ref|YP_305017.1| - 0.023 14.6 0.6 0.023 14.6 0.6 3.3 3 1 0 3 3 3 0 Dynactin subunit p22 HAUS-augmin3 PF14932.6 gi|73669002|ref|YP_305017.1| - 0.064 12.8 7.6 0.016 14.8 3.6 1.8 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 Prominin PF05478.11 gi|73669002|ref|YP_305017.1| - 0.077 10.9 5.1 0.13 10.1 3.2 2.0 2 0 0 2 2 2 0 Prominin 7TMR-HDED PF07697.11 gi|73669002|ref|YP_305017.1| - 0.093 12.8 2.2 0.31 11.1 2.2 1.9 1 1 0 1 1 1 0 7TM-HD extracellular DUF1542 PF07564.11 gi|73669002|ref|YP_305017.1| - 0.16 12.1 0.8 0.42 10.8 0.1 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1542) DUF5638 PF18688.1 gi|73669002|ref|YP_305017.1| - 0.34 11.2 3.1 0.86 9.9 0.1 2.5 2 1 0 2 2 2 0 Family of unknown function (DUF5638) DUF4486 PF14858.6 gi|73669002|ref|YP_305017.1| - 1.2 7.5 3.9 1.4 7.3 1.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4486) CAMP_factor PF07373.11 gi|73669002|ref|YP_305017.1| - 1.3 8.6 6.3 0.94 9.0 0.2 2.8 2 1 1 3 3 3 0 CAMP factor (Cfa) Wbp11 PF09429.10 gi|73669002|ref|YP_305017.1| - 1.4 9.4 3.3 4.5 7.8 0.3 2.8 2 1 1 3 3 3 0 WW domain binding protein 11 Fib_alpha PF08702.10 gi|73669002|ref|YP_305017.1| - 1.8 8.8 9.9 2.9 8.1 5.2 2.7 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family TBCC_N PF16752.5 gi|73669002|ref|YP_305017.1| - 2.8 8.4 7.8 4.5 7.7 0.1 3.2 2 1 0 2 2 2 0 Tubulin-specific chaperone C N-terminal domain DrrA_P4M PF14860.6 gi|73669002|ref|YP_305017.1| - 3.3 7.6 5.5 5.3 7.0 0.4 3.1 2 1 1 3 3 3 0 DrrA phosphatidylinositol 4-phosphate binding domain TolA_bind_tri PF16331.5 gi|73669002|ref|YP_305017.1| - 6.5 6.9 9.2 1.6 8.9 0.8 3.1 3 0 0 3 3 3 0 TolA binding protein trimerisation dCache_2 PF08269.11 gi|73669002|ref|YP_305017.1| - 7.9 5.6 10.4 3.3 6.8 1.1 2.4 2 1 1 3 3 3 0 Cache domain ABC_tran_CTD PF16326.5 gi|73669002|ref|YP_305017.1| - 9.8 6.5 7.9 1.4 9.2 0.6 3.0 3 1 0 3 3 3 0 ABC transporter C-terminal domain PAS_3 PF08447.12 gi|73669003|ref|YP_305018.1| - 4.7e-36 122.9 0.0 1.9e-19 69.7 0.0 3.3 3 0 0 3 3 3 2 PAS fold HisKA_2 PF07568.12 gi|73669003|ref|YP_305018.1| - 5.8e-31 106.4 3.1 1.4e-30 105.2 0.7 2.7 2 0 0 2 2 2 1 Histidine kinase MEDS PF14417.6 gi|73669003|ref|YP_305018.1| - 2.2e-30 105.6 0.1 5.2e-29 101.2 0.0 2.9 2 1 0 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HATPase_c PF02518.26 gi|73669003|ref|YP_305018.1| - 2.9e-11 43.8 1.0 1.9e-10 41.2 0.1 2.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|73669003|ref|YP_305018.1| - 5.2e-11 42.8 0.0 2e-08 34.5 0.0 2.6 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|73669003|ref|YP_305018.1| - 3.3e-07 30.5 0.1 0.0055 16.9 0.0 3.1 2 0 0 2 2 2 2 PAS domain PAS PF00989.25 gi|73669003|ref|YP_305018.1| - 9.3e-07 28.8 0.0 0.043 13.8 0.0 2.5 2 0 0 2 2 2 2 PAS fold HATPase_c_2 PF13581.6 gi|73669003|ref|YP_305018.1| - 0.0019 18.2 0.0 0.005 16.8 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|73669003|ref|YP_305018.1| - 0.013 16.2 0.1 0.013 16.2 0.1 3.1 4 0 0 4 4 3 0 HWE histidine kinase tRNA-Thr_ED PF08915.11 gi|73669003|ref|YP_305018.1| - 0.015 15.4 0.0 0.068 13.2 0.0 2.1 1 0 0 1 1 1 0 Archaea-specific editing domain of threonyl-tRNA synthetase NAT PF04768.13 gi|73669003|ref|YP_305018.1| - 0.062 13.0 0.0 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase SPOB_a PF14689.6 gi|73669003|ref|YP_305018.1| - 0.065 13.0 0.0 0.21 11.3 0.0 1.9 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain DUF5344 PF17279.2 gi|73669003|ref|YP_305018.1| - 3.9 8.1 10.2 1.2 9.7 2.1 3.3 3 1 1 4 4 4 0 Family of unknown function (DUF5344) DUF5050 PF16472.5 gi|73669004|ref|YP_305019.1| - 1.6e-08 34.2 27.2 7.1e-05 22.2 15.8 2.6 1 1 1 2 2 2 2 Domain of unknown function (DUF5050) Kelch_4 PF13418.6 gi|73669004|ref|YP_305019.1| - 5.8e-06 26.2 3.3 0.29 11.2 0.0 5.1 5 0 0 5 5 5 2 Galactose oxidase, central domain Pectate_lyase22 PF14583.6 gi|73669004|ref|YP_305019.1| - 3e-05 22.9 1.4 0.13 11.0 0.0 3.8 1 1 2 4 4 4 2 Oligogalacturonate lyase Kelch_3 PF13415.6 gi|73669004|ref|YP_305019.1| - 0.0028 17.9 6.8 3.7 7.9 0.1 5.0 3 2 1 5 5 5 1 Galactose oxidase, central domain FAINT PF04385.15 gi|73669004|ref|YP_305019.1| - 0.26 11.4 19.8 0.94 9.6 0.1 5.8 5 1 1 6 6 6 0 Domain of unknown function, DUF529 Fibrillarin PF01269.17 gi|73669004|ref|YP_305019.1| - 0.83 8.7 4.0 3.6 6.6 0.1 3.0 3 1 1 4 4 4 0 Fibrillarin Kelch_1 PF01344.25 gi|73669004|ref|YP_305019.1| - 1.1 8.9 12.3 36 4.0 0.3 5.1 5 0 0 5 5 5 0 Kelch motif PQQ_3 PF13570.6 gi|73669004|ref|YP_305019.1| - 2.4 8.7 9.2 2.1 8.9 0.4 4.9 5 1 0 5 5 5 0 PQQ-like domain Tox-PL-2 PF15643.6 gi|73669004|ref|YP_305019.1| - 3.8 7.7 5.6 28 4.9 0.1 4.0 3 2 2 5 5 5 0 Papain fold toxin 2 PKD PF00801.20 gi|73669005|ref|YP_305020.1| - 4.3e-30 103.4 6.5 1.4e-15 56.9 1.6 2.1 2 0 0 2 2 2 2 PKD domain MG2 PF01835.19 gi|73669005|ref|YP_305020.1| - 0.00012 22.4 1.0 0.15 12.5 0.1 2.1 1 1 1 2 2 2 2 MG2 domain ChitinaseA_N PF08329.10 gi|73669005|ref|YP_305020.1| - 0.0072 16.0 0.4 1.1 8.9 0.1 2.3 1 1 1 2 2 2 2 Chitinase A, N-terminal domain Big_4 PF07532.11 gi|73669005|ref|YP_305020.1| - 0.0072 16.0 3.9 2 8.2 0.7 3.1 3 1 0 3 3 3 2 Bacterial Ig-like domain (group 4) DUF5011 PF16403.5 gi|73669005|ref|YP_305020.1| - 0.019 15.1 6.4 0.91 9.7 0.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5011) DUF2381 PF09544.10 gi|73669005|ref|YP_305020.1| - 0.029 13.9 0.0 0.91 9.0 0.0 2.5 1 1 3 4 4 4 0 Protein of unknown function (DUF2381) DUF3324 PF11797.8 gi|73669005|ref|YP_305020.1| - 0.056 13.4 1.1 8.7 6.3 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function C-terminal (DUF3324) He_PIG PF05345.12 gi|73669005|ref|YP_305020.1| - 0.85 9.9 7.4 31 4.9 0.0 4.0 4 0 0 4 4 4 0 Putative Ig domain Pentapeptide PF00805.22 gi|73669006|ref|YP_305021.1| - 1.4e-75 248.2 49.7 4.5e-15 55.0 0.9 6.3 3 2 5 8 8 8 7 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|73669006|ref|YP_305021.1| - 1.1e-23 83.1 0.0 4.4e-08 33.2 0.1 3.4 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|73669006|ref|YP_305021.1| - 8.4e-19 67.5 0.0 0.00032 20.8 0.0 5.6 1 1 4 5 5 5 5 Pentapeptide repeats (9 copies) DNA_ligase_OB PF03120.16 gi|73669006|ref|YP_305021.1| - 0.0074 16.2 0.3 15 5.5 0.0 4.6 1 1 3 5 5 5 1 NAD-dependent DNA ligase OB-fold domain FtsZ_C PF12327.8 gi|73669006|ref|YP_305021.1| - 0.019 15.3 2.6 0.14 12.5 0.1 3.0 1 1 2 3 3 3 0 FtsZ family, C-terminal domain CarboxypepD_reg PF13620.6 gi|73669007|ref|YP_305022.1| - 2.1e-09 37.5 0.7 1.7e-06 28.2 0.0 3.6 3 0 0 3 3 3 2 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|73669007|ref|YP_305022.1| - 1.9e-05 24.6 1.2 0.00017 21.6 0.0 3.0 3 0 0 3 3 3 1 CarboxypepD_reg-like domain Beta_helix PF13229.6 gi|73669007|ref|YP_305022.1| - 0.0019 18.0 21.6 0.0019 18.0 21.6 5.6 2 1 4 6 6 6 2 Right handed beta helix region DUF1410 PF07198.11 gi|73669007|ref|YP_305022.1| - 3.2 8.3 6.5 0.85 10.2 1.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1410) TBPIP PF07106.13 gi|73669008|ref|YP_305023.1| - 0.032 14.2 0.1 0.042 13.8 0.1 1.2 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain SelB-wing_2 PF09106.11 gi|73669008|ref|YP_305023.1| - 0.069 13.4 0.0 0.099 12.9 0.0 1.2 1 0 0 1 1 1 0 Elongation factor SelB, winged helix DUF2254 PF10011.9 gi|73669010|ref|YP_305025.1| - 1.3e-11 44.0 9.5 2e-11 43.3 9.5 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) Spo7 PF03907.13 gi|73669010|ref|YP_305025.1| - 1.7 8.1 5.8 1.6 8.1 1.9 2.5 1 1 1 2 2 2 0 Spo7-like protein Arc_PepC_II PF06847.11 gi|73669011|ref|YP_305026.1| - 2.3e-30 105.0 0.0 5.7e-30 103.7 0.0 1.7 1 0 0 1 1 1 1 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.18 gi|73669011|ref|YP_305026.1| - 2.4e-13 50.4 5.9 2.4e-13 50.4 5.9 1.8 2 0 0 2 2 2 1 Type IV leader peptidase family TP_methylase PF00590.20 gi|73669012|ref|YP_305027.1| - 1.4e-22 80.7 0.2 3.4e-21 76.2 0.2 2.0 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiD PF01888.17 gi|73669013|ref|YP_305028.1| - 2.1e-51 174.6 0.5 3.1e-51 174.1 0.5 1.2 1 0 0 1 1 1 1 CbiD sCache_like PF16736.5 gi|73669013|ref|YP_305028.1| - 0.088 12.9 0.0 0.24 11.5 0.0 1.8 1 0 0 1 1 1 0 Single Cache-like DNA_mis_repair PF01119.19 gi|73669014|ref|YP_305029.1| - 2.6e-38 130.3 0.0 4.9e-38 129.5 0.0 1.5 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.11 gi|73669014|ref|YP_305029.1| - 1.1e-34 119.3 0.0 2.4e-34 118.2 0.0 1.5 1 0 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.6 gi|73669014|ref|YP_305029.1| - 3e-13 49.8 0.1 6.1e-13 48.8 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|73669014|ref|YP_305029.1| - 8.4e-08 32.7 0.1 2.1e-07 31.4 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MutS_V PF00488.21 gi|73669015|ref|YP_305030.1| - 7.5e-86 287.0 0.1 7.5e-86 287.0 0.1 2.0 3 0 0 3 3 3 1 MutS domain V MutS_III PF05192.18 gi|73669015|ref|YP_305030.1| - 8.7e-44 150.0 2.7 8.2e-43 146.9 0.9 2.6 3 0 0 3 3 3 1 MutS domain III MutS_I PF01624.20 gi|73669015|ref|YP_305030.1| - 1.2e-43 147.9 0.1 7.3e-43 145.4 0.0 2.2 2 0 0 2 2 2 1 MutS domain I MutS_IV PF05190.18 gi|73669015|ref|YP_305030.1| - 3.7e-32 110.5 0.7 1.2e-31 108.9 0.7 2.0 1 0 0 1 1 1 1 MutS family domain IV MutS_II PF05188.17 gi|73669015|ref|YP_305030.1| - 3.2e-24 85.8 0.0 1.1e-23 84.1 0.0 2.0 2 0 0 2 2 2 1 MutS domain II AAA_27 PF13514.6 gi|73669015|ref|YP_305030.1| - 0.0026 17.4 0.0 0.018 14.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain HTH_27 PF13463.6 gi|73669015|ref|YP_305030.1| - 0.033 14.7 2.2 14 6.3 0.3 3.7 3 0 0 3 3 3 0 Winged helix DNA-binding domain AAA_29 PF13555.6 gi|73669015|ref|YP_305030.1| - 0.075 12.8 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF1129 PF06570.11 gi|73669016|ref|YP_305031.1| - 0.0014 18.2 3.9 0.004 16.7 3.8 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1129) DUF1048 PF06304.11 gi|73669016|ref|YP_305031.1| - 0.0049 17.3 0.2 0.0088 16.5 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1048) DUF3810 PF12725.7 gi|73669016|ref|YP_305031.1| - 0.023 14.1 0.9 0.023 14.1 0.9 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3810) PadR PF03551.14 gi|73669017|ref|YP_305032.1| - 1.2e-22 79.6 0.3 1.6e-22 79.2 0.3 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|73669017|ref|YP_305032.1| - 0.073 13.2 0.0 0.098 12.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain CDP-OH_P_transf PF01066.21 gi|73669018|ref|YP_305033.1| - 9.6e-09 35.9 1.7 9.6e-09 35.9 1.7 2.3 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase GerA PF03323.13 gi|73669018|ref|YP_305033.1| - 0.21 10.0 0.4 0.24 9.8 0.4 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein DUF2189 PF09955.9 gi|73669018|ref|YP_305033.1| - 6.4 7.0 8.7 0.1 12.9 1.5 1.7 2 1 0 2 2 2 0 Predicted integral membrane protein (DUF2189) CCG PF02754.16 gi|73669019|ref|YP_305034.1| - 2.3e-30 104.7 2.6 7.3e-16 58.2 0.2 2.5 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|73669019|ref|YP_305034.1| - 1.2e-06 28.9 7.5 1.2e-06 28.9 7.5 2.6 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73669019|ref|YP_305034.1| - 4.2e-05 23.6 11.7 4.2e-05 23.6 11.7 3.6 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73669019|ref|YP_305034.1| - 5.3e-05 23.7 9.3 5.3e-05 23.7 9.3 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73669019|ref|YP_305034.1| - 6.7e-05 23.0 18.2 0.011 15.9 1.1 3.9 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73669019|ref|YP_305034.1| - 9.4e-05 22.6 3.2 0.11 12.7 0.2 2.8 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73669019|ref|YP_305034.1| - 0.00019 21.9 11.3 0.00019 21.9 11.3 3.2 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73669019|ref|YP_305034.1| - 0.0017 19.2 14.8 0.059 14.3 0.1 3.4 4 0 0 4 4 3 2 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|73669019|ref|YP_305034.1| - 0.0044 16.8 2.2 0.0044 16.8 2.2 3.6 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73669019|ref|YP_305034.1| - 0.0055 17.1 0.8 0.0055 17.1 0.8 3.8 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73669019|ref|YP_305034.1| - 0.026 14.6 5.1 0.026 14.6 5.1 3.7 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73669019|ref|YP_305034.1| - 0.028 14.5 1.9 0.028 14.5 1.9 3.9 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73669019|ref|YP_305034.1| - 0.045 13.9 15.5 0.39 10.9 1.3 3.7 4 0 0 4 4 4 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73669019|ref|YP_305034.1| - 0.22 12.1 10.8 1.6 9.3 0.4 3.1 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_20 PF14691.6 gi|73669019|ref|YP_305034.1| - 0.61 9.9 6.3 0.62 9.8 0.4 2.5 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_3 PF12798.7 gi|73669019|ref|YP_305034.1| - 0.72 10.9 30.3 0.16 13.0 4.2 4.2 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|73669019|ref|YP_305034.1| - 6.1 7.7 10.9 2.9 8.7 0.7 3.1 3 0 0 3 3 2 0 4Fe-4S single cluster domain Fer4_NifH PF00142.18 gi|73669020|ref|YP_305035.1| - 8.5e-14 51.6 0.0 8.9e-14 51.6 0.0 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_31 PF13614.6 gi|73669020|ref|YP_305035.1| - 0.084 12.8 0.0 0.084 12.8 0.0 1.0 1 0 0 1 1 1 0 AAA domain B12-binding PF02310.19 gi|73669021|ref|YP_305036.1| - 4.6e-26 91.2 0.6 7.1e-26 90.6 0.6 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|73669021|ref|YP_305036.1| - 2.6e-19 69.4 0.9 7.1e-19 68.0 0.6 1.9 2 0 0 2 2 2 1 B12 binding domain B12-binding PF02310.19 gi|73669022|ref|YP_305037.1| - 3.8e-23 81.8 0.6 7e-23 81.0 0.6 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|73669022|ref|YP_305037.1| - 1.2e-21 76.9 0.8 1.2e-21 76.9 0.8 2.5 3 0 0 3 3 3 1 B12 binding domain EamA PF00892.20 gi|73669023|ref|YP_305038.1| - 7e-14 52.2 48.1 1.8e-07 31.4 15.9 3.2 2 1 0 2 2 2 2 EamA-like transporter family tRNA-synt_1f PF01921.18 gi|73669025|ref|YP_305040.1| - 1.2e-130 435.7 0.0 1.6e-130 435.3 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|73669025|ref|YP_305040.1| - 6.5e-10 38.3 0.0 0.00024 20.0 0.0 2.6 3 0 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|73669025|ref|YP_305040.1| - 4.2e-06 26.3 0.0 0.036 13.4 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 gi|73669025|ref|YP_305040.1| - 0.15 10.3 0.0 2.5 6.2 0.0 2.1 2 0 0 2 2 2 0 tRNA synthetases class I (I, L, M and V) tRNA-synt_1b PF00579.25 gi|73669025|ref|YP_305040.1| - 0.15 11.3 0.0 4.1 6.6 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) Methyltransf_11 PF08241.12 gi|73669026|ref|YP_305041.1| - 2e-16 60.4 0.0 3.3e-16 59.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73669026|ref|YP_305041.1| - 1.1e-15 58.2 0.0 3.9e-15 56.3 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73669026|ref|YP_305041.1| - 4.6e-10 39.6 0.0 8.3e-10 38.7 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669026|ref|YP_305041.1| - 9.2e-10 38.5 0.0 1.7e-09 37.6 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73669026|ref|YP_305041.1| - 1.2e-08 35.6 0.0 2.4e-08 34.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|73669026|ref|YP_305041.1| - 8e-06 25.3 0.0 1e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.11 gi|73669026|ref|YP_305041.1| - 5.5e-05 22.2 0.0 0.0001 21.4 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) MetW PF07021.12 gi|73669026|ref|YP_305041.1| - 0.0022 17.6 0.0 0.0033 17.0 0.0 1.4 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW CheR PF01739.18 gi|73669026|ref|YP_305041.1| - 0.11 12.0 0.0 0.39 10.2 0.0 1.8 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain Methyltransf_32 PF13679.6 gi|73669026|ref|YP_305041.1| - 0.17 11.9 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain BofA PF07441.11 gi|73669027|ref|YP_305042.1| - 2.3e-11 43.7 21.5 3e-11 43.4 21.5 1.2 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA Pox_A14 PF05767.12 gi|73669027|ref|YP_305042.1| - 2 8.6 11.5 0.91 9.7 9.2 1.6 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 DUF2721 PF11026.8 gi|73669027|ref|YP_305042.1| - 6 6.8 14.4 1.5 8.8 11.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) Popeye PF04831.13 gi|73669027|ref|YP_305042.1| - 6.7 6.9 8.8 7.4 6.7 7.8 1.6 1 1 1 2 2 2 0 Popeye protein conserved region Nuc_deoxyrib_tr PF05014.15 gi|73669028|ref|YP_305043.1| - 1.2e-06 28.6 0.0 1.3e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase Peptidase_U32 PF01136.19 gi|73669029|ref|YP_305044.1| - 5.1e-129 428.3 0.0 3.6e-87 291.4 0.0 2.2 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.8 gi|73669029|ref|YP_305044.1| - 2.5e-28 98.8 1.0 1e-27 96.9 0.4 2.4 2 0 0 2 2 2 1 Collagenase Glyco_hydro_97 PF10566.9 gi|73669029|ref|YP_305044.1| - 0.12 11.6 0.0 0.38 10.0 0.0 1.7 2 0 0 2 2 2 0 Glycoside hydrolase 97 DUF2059 PF09832.9 gi|73669029|ref|YP_305044.1| - 0.22 11.6 0.6 15 5.7 0.0 2.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2059) MazG PF03819.17 gi|73669031|ref|YP_305046.1| - 1.8e-10 40.8 0.1 2.2e-10 40.6 0.1 1.1 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain His_biosynth PF00977.21 gi|73669032|ref|YP_305047.1| - 1.8e-89 299.2 0.2 2e-89 299.0 0.2 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.14 gi|73669032|ref|YP_305047.1| - 1.1e-06 28.2 0.1 0.041 13.2 0.1 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|73669032|ref|YP_305047.1| - 6.1e-06 25.9 0.2 0.092 12.1 0.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase G3P_antiterm PF04309.12 gi|73669032|ref|YP_305047.1| - 3.4e-05 23.3 0.3 0.014 14.8 0.1 2.2 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator Dus PF01207.17 gi|73669032|ref|YP_305047.1| - 7.6e-05 21.9 0.0 0.0023 17.1 0.0 2.1 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) IMPDH PF00478.25 gi|73669032|ref|YP_305047.1| - 0.00022 20.3 0.3 0.34 9.9 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain TMP-TENI PF02581.17 gi|73669032|ref|YP_305047.1| - 0.00022 20.6 0.2 0.31 10.4 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase DHO_dh PF01180.21 gi|73669032|ref|YP_305047.1| - 0.0053 16.0 0.1 2.8 7.0 0.1 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase DNase-RNase PF02577.14 gi|73669033|ref|YP_305048.1| - 2e-37 127.7 0.1 2.3e-37 127.5 0.1 1.1 1 0 0 1 1 1 1 Bifunctional nuclease PCMT PF01135.19 gi|73669034|ref|YP_305049.1| - 5.3e-44 150.5 0.1 6.3e-44 150.2 0.1 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|73669034|ref|YP_305049.1| - 1.8e-08 34.4 0.0 2.8e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|73669034|ref|YP_305049.1| - 4.2e-08 33.2 0.0 6.4e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Fibrillarin PF01269.17 gi|73669034|ref|YP_305049.1| - 2.3e-05 23.6 0.0 3.4e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_3 PF01596.17 gi|73669034|ref|YP_305049.1| - 5.8e-05 22.4 0.4 0.0001 21.5 0.0 1.5 2 0 0 2 2 2 1 O-methyltransferase RrnaAD PF00398.20 gi|73669034|ref|YP_305049.1| - 7.9e-05 21.8 0.0 0.00012 21.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|73669034|ref|YP_305049.1| - 0.0006 20.5 0.0 0.0014 19.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73669034|ref|YP_305049.1| - 0.0019 18.1 0.0 0.0043 16.9 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73669034|ref|YP_305049.1| - 0.0024 17.2 0.0 0.0042 16.5 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_24 PF13578.6 gi|73669034|ref|YP_305049.1| - 0.01 16.8 0.1 0.025 15.6 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669034|ref|YP_305049.1| - 0.015 15.9 0.1 0.043 14.5 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|73669034|ref|YP_305049.1| - 0.018 14.7 0.0 0.028 14.1 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F CMAS PF02353.20 gi|73669034|ref|YP_305049.1| - 0.019 14.3 0.0 0.025 13.9 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|73669034|ref|YP_305049.1| - 0.062 12.9 0.1 0.097 12.2 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase small domain ACP_syn_III_C PF08541.10 gi|73669034|ref|YP_305049.1| - 0.17 12.1 0.1 0.32 11.2 0.1 1.6 1 1 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal zinc_ribbon_4 PF13717.6 gi|73669035|ref|YP_305050.1| - 0.022 14.7 0.4 0.055 13.4 0.4 1.7 1 0 0 1 1 1 0 zinc-ribbon domain Elf1 PF05129.13 gi|73669035|ref|YP_305050.1| - 0.056 13.5 0.2 0.099 12.7 0.2 1.4 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like DUF1765 PF08578.10 gi|73669036|ref|YP_305051.1| - 0.0017 18.8 0.5 0.0019 18.6 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1765) SHR3_chaperone PF08229.11 gi|73669036|ref|YP_305051.1| - 0.072 12.1 0.1 0.078 11.9 0.1 1.2 1 0 0 1 1 1 0 ER membrane protein SH3 Putative_PNPOx PF01243.20 gi|73669038|ref|YP_305053.1| - 1.5e-19 70.0 0.0 1.9e-19 69.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|73669038|ref|YP_305053.1| - 0.00087 18.9 0.0 0.0011 18.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like CTP-dep_RFKase PF01982.16 gi|73669039|ref|YP_305054.1| - 4.3e-46 155.9 0.0 6.9e-46 155.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 MarR PF01047.22 gi|73669039|ref|YP_305054.1| - 0.014 15.3 0.1 0.025 14.5 0.1 1.4 1 0 0 1 1 1 0 MarR family eIF-1a PF01176.19 gi|73669039|ref|YP_305054.1| - 0.018 14.8 0.0 3.6 7.5 0.0 2.5 2 0 0 2 2 2 0 Translation initiation factor 1A / IF-1 HTH_Crp_2 PF13545.6 gi|73669039|ref|YP_305054.1| - 0.021 14.8 0.0 0.047 13.7 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HxlR PF01638.17 gi|73669039|ref|YP_305054.1| - 0.059 13.2 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DHBP_synthase PF00926.19 gi|73669040|ref|YP_305055.1| - 1.3e-60 204.2 0.1 1.6e-60 203.9 0.1 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PEP-utilizers PF00391.23 gi|73669040|ref|YP_305055.1| - 0.027 14.2 0.0 0.11 12.2 0.0 2.0 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain Transposase_mut PF00872.18 gi|73669041|ref|YP_305056.1| - 7.7e-50 169.8 0.1 9.1e-50 169.6 0.1 1.0 1 0 0 1 1 1 1 Transposase, Mutator family DDE_Tnp_IS66 PF03050.14 gi|73669041|ref|YP_305056.1| - 0.0031 17.0 0.0 0.0048 16.4 0.0 1.3 1 0 0 1 1 1 1 Transposase IS66 family Transposase_mut PF00872.18 gi|73669042|ref|YP_305057.1| - 6.9e-10 38.3 0.1 8.3e-10 38.1 0.1 1.1 1 0 0 1 1 1 1 Transposase, Mutator family Gasdermin_C PF17708.1 gi|73669042|ref|YP_305057.1| - 0.00097 19.3 0.3 0.0011 19.1 0.3 1.1 1 0 0 1 1 1 1 Gasdermin PUB domain DDE_Tnp_IS66 PF03050.14 gi|73669042|ref|YP_305057.1| - 0.011 15.2 0.1 0.012 15.1 0.1 1.0 1 0 0 1 1 1 0 Transposase IS66 family DHQ_synthase PF01761.20 gi|73669042|ref|YP_305057.1| - 0.042 13.0 0.0 0.042 13.0 0.0 1.0 1 0 0 1 1 1 0 3-dehydroquinate synthase NosD PF05048.13 gi|73669043|ref|YP_305058.1| - 4.4e-32 111.3 20.4 2.6e-31 108.7 20.4 1.8 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) DUF1565 PF07602.11 gi|73669043|ref|YP_305058.1| - 0.00052 19.4 10.4 0.0016 17.9 10.0 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1565) DUF1699 PF08004.11 gi|73669044|ref|YP_305059.1| - 5.7e-61 203.9 1.1 6.4e-61 203.8 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|73669044|ref|YP_305059.1| - 0.052 13.9 0.1 0.076 13.3 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Glycos_transf_2 PF00535.26 gi|73669046|ref|YP_305061.1| - 2.8e-35 121.6 0.1 5.3e-35 120.7 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73669046|ref|YP_305061.1| - 2.9e-24 86.2 0.0 4.1e-24 85.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|73669046|ref|YP_305061.1| - 3.1e-21 76.2 2.9 3.1e-21 76.2 2.9 1.9 2 1 0 2 2 2 1 Glycosyl transferase family group 2 DUF2334 PF10096.9 gi|73669046|ref|YP_305061.1| - 7.5e-10 38.8 0.0 1.9e-08 34.2 0.0 2.6 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2334) Glyco_tranf_2_2 PF10111.9 gi|73669046|ref|YP_305061.1| - 1.1e-09 38.2 0.5 2.1e-09 37.3 0.2 1.7 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|73669046|ref|YP_305061.1| - 1.4e-06 27.9 0.0 2.9e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Chitin_synth_2 PF03142.15 gi|73669046|ref|YP_305061.1| - 1.8e-05 23.6 6.9 0.008 14.8 0.1 3.2 1 1 1 3 3 3 2 Chitin synthase Glyco_tranf_2_4 PF13704.6 gi|73669046|ref|YP_305061.1| - 7.8e-05 23.1 0.4 0.00021 21.8 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 2 Polysacc_deac_1 PF01522.21 gi|73669046|ref|YP_305061.1| - 0.00026 20.9 0.0 0.0019 18.1 0.0 2.3 1 1 0 2 2 2 1 Polysaccharide deacetylase MotB_plug PF13677.6 gi|73669047|ref|YP_305062.1| - 0.16 11.6 0.2 0.41 10.3 0.2 1.7 1 0 0 1 1 1 0 Membrane MotB of proton-channel complex MotA/MotB DLH PF01738.18 gi|73669048|ref|YP_305063.1| - 6.3e-10 39.0 0.0 7.9e-10 38.6 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 gi|73669048|ref|YP_305063.1| - 8.1e-09 35.1 0.1 0.00042 19.6 0.0 2.9 2 1 0 2 2 2 2 Serine aminopeptidase, S33 BAAT_C PF08840.11 gi|73669048|ref|YP_305063.1| - 1.6e-07 31.5 0.0 0.00057 19.9 0.0 2.2 1 1 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 gi|73669048|ref|YP_305063.1| - 5e-07 29.4 0.1 0.013 15.0 0.0 2.7 2 1 1 3 3 3 2 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 gi|73669048|ref|YP_305063.1| - 0.0002 21.1 0.0 0.079 12.6 0.0 2.5 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|73669048|ref|YP_305063.1| - 0.00058 20.5 0.0 0.51 10.9 0.0 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 gi|73669048|ref|YP_305063.1| - 0.0075 15.9 0.1 0.044 13.4 0.0 1.8 1 1 1 2 2 2 1 X-Pro dipeptidyl-peptidase (S15 family) PAF-AH_p_II PF03403.13 gi|73669048|ref|YP_305063.1| - 0.086 11.3 0.0 0.92 8.0 0.0 1.9 2 0 0 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II Pribosyltran PF00156.27 gi|73669049|ref|YP_305064.1| - 3.1e-26 91.8 0.0 5.5e-26 91.0 0.0 1.3 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|73669049|ref|YP_305064.1| - 0.00033 20.2 0.2 0.00051 19.5 0.2 1.6 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|73669049|ref|YP_305064.1| - 0.00064 19.3 0.0 0.0014 18.2 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase MASE3 PF17159.4 gi|73669050|ref|YP_305065.1| - 1.5e-68 230.8 21.7 2e-68 230.4 21.7 1.2 1 0 0 1 1 1 1 Membrane-associated sensor domain HisKA_2 PF07568.12 gi|73669050|ref|YP_305065.1| - 3.1e-33 113.7 2.9 7.3e-33 112.5 2.9 1.7 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.12 gi|73669050|ref|YP_305065.1| - 3.8e-16 59.1 0.1 9.7e-16 57.8 0.0 1.7 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.26 gi|73669050|ref|YP_305065.1| - 3.2e-08 34.1 0.0 8.8e-08 32.6 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|73669050|ref|YP_305065.1| - 3.3e-05 24.5 0.5 7e-05 23.4 0.5 1.6 1 0 0 1 1 1 1 HWE histidine kinase PAS_9 PF13426.7 gi|73669050|ref|YP_305065.1| - 8.7e-05 22.7 0.1 0.00025 21.3 0.1 1.8 1 0 0 1 1 1 1 PAS domain SPOB_a PF14689.6 gi|73669050|ref|YP_305065.1| - 0.019 14.6 0.1 0.26 11.0 0.0 2.4 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain DUF3989 PF13150.6 gi|73669050|ref|YP_305065.1| - 0.069 12.9 3.3 5.4 6.8 0.0 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3989) PRC PF05239.16 gi|73669051|ref|YP_305066.1| - 7e-35 119.0 0.0 2e-19 69.5 0.0 2.1 2 0 0 2 2 2 2 PRC-barrel domain PRC PF05239.16 gi|73669052|ref|YP_305067.1| - 3.9e-54 180.7 0.0 3.7e-18 65.4 0.0 3.2 3 0 0 3 3 3 3 PRC-barrel domain TNV_CP PF03898.13 gi|73669052|ref|YP_305067.1| - 0.015 14.6 0.1 0.11 11.7 0.0 2.0 2 0 0 2 2 2 0 Satellite tobacco necrosis virus coat protein LD_cluster2 PF18163.1 gi|73669052|ref|YP_305067.1| - 0.017 14.7 4.8 4.2 6.8 0.0 3.8 3 1 1 4 4 4 0 SLOG cluster2 DUF362 PF04015.12 gi|73669053|ref|YP_305068.1| - 3.5e-48 164.5 0.0 5.1e-48 164.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|73669053|ref|YP_305068.1| - 2.7e-09 36.5 12.5 5.3e-05 22.8 4.7 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73669053|ref|YP_305068.1| - 4.5e-07 29.9 11.4 9.4e-07 28.9 11.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73669053|ref|YP_305068.1| - 1.5e-06 27.9 13.7 0.003 17.6 2.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73669053|ref|YP_305068.1| - 5.1e-06 27.0 12.5 1.4e-05 25.6 12.5 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73669053|ref|YP_305068.1| - 6.2e-05 22.9 14.9 9.9e-05 22.3 1.5 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73669053|ref|YP_305068.1| - 0.00065 19.8 13.5 0.0034 17.5 14.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73669053|ref|YP_305068.1| - 0.00077 19.9 6.6 0.28 11.8 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73669053|ref|YP_305068.1| - 0.0056 16.8 17.2 0.039 14.1 16.2 2.5 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73669053|ref|YP_305068.1| - 0.012 16.6 11.7 0.21 12.5 0.9 2.6 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|73669053|ref|YP_305068.1| - 0.016 16.0 7.6 0.37 11.6 0.5 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|73669053|ref|YP_305068.1| - 0.19 12.3 17.2 0.31 11.7 2.6 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73669053|ref|YP_305068.1| - 0.2 12.2 11.7 3.8 8.1 4.2 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|73669053|ref|YP_305068.1| - 2.4 8.7 19.6 9.7 6.7 5.5 2.9 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73669053|ref|YP_305068.1| - 7.9 7.7 25.7 2.5 9.2 6.5 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain HTH_5 PF01022.20 gi|73669054|ref|YP_305069.1| - 1.5e-05 24.8 0.1 3.5e-05 23.6 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73669054|ref|YP_305069.1| - 0.00072 19.6 0.2 0.0018 18.3 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|73669054|ref|YP_305069.1| - 0.00086 18.8 0.4 0.0041 16.7 0.1 2.4 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding RepL PF05732.11 gi|73669054|ref|YP_305069.1| - 0.0031 17.0 0.0 0.0037 16.7 0.0 1.1 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) MarR PF01047.22 gi|73669054|ref|YP_305069.1| - 0.0051 16.7 0.1 0.011 15.6 0.1 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|73669054|ref|YP_305069.1| - 0.011 15.6 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.9 gi|73669054|ref|YP_305069.1| - 0.014 15.5 0.2 0.024 14.7 0.2 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Mga PF05043.13 gi|73669054|ref|YP_305069.1| - 0.018 15.6 0.3 0.03 14.9 0.1 1.6 2 0 0 2 2 2 0 Mga helix-turn-helix domain TFIIE_alpha PF02002.17 gi|73669054|ref|YP_305069.1| - 0.028 14.3 0.2 0.059 13.2 0.2 1.5 1 0 0 1 1 1 0 TFIIE alpha subunit Rrf2 PF02082.20 gi|73669054|ref|YP_305069.1| - 0.03 14.7 0.0 0.055 13.8 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator RP-C PF03428.13 gi|73669054|ref|YP_305069.1| - 0.038 13.7 0.2 0.083 12.5 0.1 1.5 1 1 0 1 1 1 0 Replication protein C N-terminal domain z-alpha PF02295.17 gi|73669054|ref|YP_305069.1| - 1.3 9.1 3.5 1.3 9.1 0.2 2.4 3 0 0 3 3 3 0 Adenosine deaminase z-alpha domain Cpn10 PF00166.21 gi|73669055|ref|YP_305070.1| - 3.6e-26 91.0 0.8 4e-26 90.9 0.8 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Cpn60_TCP1 PF00118.24 gi|73669056|ref|YP_305071.1| - 4.7e-100 335.5 21.0 1e-99 334.5 21.0 1.5 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family GTP-bdg_M PF16360.5 gi|73669056|ref|YP_305071.1| - 0.053 14.1 0.3 0.13 12.9 0.3 1.6 1 0 0 1 1 1 0 GTP-binding GTPase Middle Region ImmE5 PF11480.8 gi|73669056|ref|YP_305071.1| - 0.091 13.3 0.1 0.33 11.5 0.1 2.0 1 0 0 1 1 1 0 Colicin-E5 Imm protein Aminotran_1_2 PF00155.21 gi|73669059|ref|YP_305074.1| - 4.4e-63 213.6 0.0 5e-63 213.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|73669059|ref|YP_305074.1| - 2.2e-10 40.4 0.0 3.1e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|73669059|ref|YP_305074.1| - 5.4e-07 28.5 0.0 7.8e-07 28.0 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|73669059|ref|YP_305074.1| - 4.5e-06 26.1 0.0 7.1e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|73669059|ref|YP_305074.1| - 4.7e-05 22.5 0.0 8.7e-05 21.6 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V OKR_DC_1 PF01276.20 gi|73669059|ref|YP_305074.1| - 0.0042 15.9 0.0 0.0061 15.3 0.0 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Aminotran_3 PF00202.21 gi|73669059|ref|YP_305074.1| - 0.048 12.3 0.0 0.06 12.0 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-III LMSTEN PF07988.12 gi|73669060|ref|YP_305075.1| - 0.061 12.8 0.3 0.17 11.4 0.3 1.7 1 0 0 1 1 1 0 LMSTEN motif Pyridox_ox_2 PF12900.7 gi|73669061|ref|YP_305076.1| - 3.6e-28 98.3 0.0 4.1e-28 98.1 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|73669061|ref|YP_305076.1| - 3.4e-06 27.1 0.0 5.2e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase TPR_6 PF13174.6 gi|73669061|ref|YP_305076.1| - 0.072 13.8 0.1 0.18 12.5 0.1 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat AnfO_nitrog PF09582.10 gi|73669062|ref|YP_305077.1| - 5.4e-16 58.5 0.3 8.3e-15 54.6 0.1 1.9 1 1 1 2 2 2 2 Iron only nitrogenase protein AnfO (AnfO_nitrog) Oxidored_nitro PF00148.19 gi|73669063|ref|YP_305078.1| - 2.1e-118 395.6 0.0 2.3e-118 395.4 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase AnfG_VnfG PF03139.15 gi|73669064|ref|YP_305079.1| - 1.9e-51 172.9 0.8 2.1e-51 172.7 0.8 1.0 1 0 0 1 1 1 1 Vanadium/alternative nitrogenase delta subunit Vpu PF00558.19 gi|73669064|ref|YP_305079.1| - 0.084 12.7 0.3 0.26 11.1 0.1 1.7 2 0 0 2 2 2 0 Vpu protein Oxidored_nitro PF00148.19 gi|73669065|ref|YP_305080.1| - 9.5e-98 327.5 0.0 1.1e-97 327.3 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase P-II PF00543.22 gi|73669066|ref|YP_305081.1| - 8.5e-33 113.0 0.8 1.1e-32 112.7 0.8 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II P-II PF00543.22 gi|73669067|ref|YP_305082.1| - 1.8e-27 95.9 0.3 2.1e-27 95.7 0.3 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II CdAMP_rec PF06153.11 gi|73669067|ref|YP_305082.1| - 0.0006 20.0 0.6 0.022 14.9 0.2 2.7 1 1 1 2 2 2 1 Cyclic-di-AMP receptor DUF2179 PF10035.9 gi|73669067|ref|YP_305082.1| - 0.69 9.7 3.3 0.7 9.7 0.7 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2179) ABC_tran PF00005.27 gi|73669068|ref|YP_305083.1| - 5.1e-33 114.5 0.0 1.2e-32 113.3 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|73669068|ref|YP_305083.1| - 7.4e-11 42.4 0.5 0.00021 21.2 0.1 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73669068|ref|YP_305083.1| - 5.7e-07 29.2 1.6 9.2e-06 25.2 0.1 2.6 2 1 0 2 2 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|73669068|ref|YP_305083.1| - 8.1e-05 22.9 0.3 0.087 13.1 0.1 2.3 2 0 0 2 2 2 2 AAA domain AAA_23 PF13476.6 gi|73669068|ref|YP_305083.1| - 0.00041 20.9 7.3 0.00079 20.0 6.1 2.3 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|73669068|ref|YP_305083.1| - 0.0011 19.0 0.1 0.0026 17.7 0.1 1.6 1 0 0 1 1 1 1 RsgA GTPase ATPase_2 PF01637.18 gi|73669068|ref|YP_305083.1| - 0.0027 17.6 0.1 0.0062 16.5 0.1 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA PF00004.29 gi|73669068|ref|YP_305083.1| - 0.0046 17.4 0.1 0.06 13.8 0.1 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|73669068|ref|YP_305083.1| - 0.0056 16.4 0.1 0.016 14.9 0.1 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain Mg_chelatase PF01078.21 gi|73669068|ref|YP_305083.1| - 0.0091 15.4 0.2 0.05 13.0 0.0 2.3 4 0 0 4 4 4 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|73669068|ref|YP_305083.1| - 0.014 15.8 0.0 0.036 14.4 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 gi|73669068|ref|YP_305083.1| - 0.016 13.9 0.0 1.2 7.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 gi|73669068|ref|YP_305083.1| - 0.029 14.1 0.0 0.059 13.1 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation TOBE_2 PF08402.10 gi|73669068|ref|YP_305083.1| - 0.029 14.5 0.0 0.24 11.6 0.0 2.4 3 0 0 3 3 2 0 TOBE domain SbcCD_C PF13558.6 gi|73669068|ref|YP_305083.1| - 0.039 14.2 0.1 0.37 11.1 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TniB PF05621.11 gi|73669068|ref|YP_305083.1| - 0.043 13.2 0.1 1.8 8.0 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein AAA_30 PF13604.6 gi|73669068|ref|YP_305083.1| - 0.071 12.8 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|73669068|ref|YP_305083.1| - 0.087 13.0 0.1 0.18 11.9 0.1 1.5 1 0 0 1 1 1 0 AAA domain PEPCK_ATP PF01293.20 gi|73669068|ref|YP_305083.1| - 0.11 11.2 0.2 0.19 10.4 0.2 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase TIP49 PF06068.13 gi|73669068|ref|YP_305083.1| - 0.11 11.7 0.0 0.2 10.8 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain TOBE_3 PF12857.7 gi|73669068|ref|YP_305083.1| - 0.11 12.4 0.0 0.27 11.2 0.0 1.6 1 0 0 1 1 1 0 TOBE-like domain IstB_IS21 PF01695.17 gi|73669068|ref|YP_305083.1| - 0.14 11.9 0.1 0.4 10.4 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein TsaE PF02367.17 gi|73669068|ref|YP_305083.1| - 0.14 12.2 0.1 0.33 10.9 0.1 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 gi|73669068|ref|YP_305083.1| - 0.19 12.0 0.2 1.5 9.0 0.2 2.1 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 gi|73669069|ref|YP_305084.1| - 7.7e-22 77.9 14.6 7.7e-22 77.9 14.6 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component NapE PF06796.11 gi|73669069|ref|YP_305084.1| - 0.95 9.0 4.4 1.8 8.2 0.1 2.5 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE SBP_bac_11 PF13531.6 gi|73669070|ref|YP_305085.1| - 2.2e-58 197.7 0.1 2.6e-58 197.5 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|73669070|ref|YP_305085.1| - 1.7e-22 80.8 3.2 6.5e-21 75.6 2.9 2.2 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|73669070|ref|YP_305085.1| - 1.2e-08 34.7 0.0 2e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|73669070|ref|YP_305085.1| - 2.1e-07 31.0 0.9 2.5e-05 24.2 0.2 2.3 1 1 0 2 2 2 2 Bacterial extracellular solute-binding protein PBP_like_2 PF12849.7 gi|73669070|ref|YP_305085.1| - 3.1e-07 30.3 2.8 2.8e-06 27.2 2.8 2.0 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|73669070|ref|YP_305085.1| - 6.5e-06 25.4 0.1 1.7e-05 24.0 0.1 1.7 1 1 0 1 1 1 1 PBP superfamily domain TOBE PF03459.17 gi|73669071|ref|YP_305086.1| - 1e-17 64.2 0.1 1.1e-17 64.1 0.1 1.0 1 0 0 1 1 1 1 TOBE domain TOBE_2 PF08402.10 gi|73669071|ref|YP_305086.1| - 0.0066 16.6 0.0 0.0086 16.2 0.0 1.1 1 0 0 1 1 1 1 TOBE domain SLBB PF10531.9 gi|73669071|ref|YP_305086.1| - 0.094 12.6 0.2 0.15 11.9 0.2 1.3 1 0 0 1 1 1 0 SLBB domain OB_aCoA_assoc PF01796.17 gi|73669071|ref|YP_305086.1| - 0.14 12.2 0.0 0.2 11.7 0.0 1.3 1 1 0 1 1 1 0 DUF35 OB-fold domain, acyl-CoA-associated Molybdopterin PF00384.22 gi|73669072|ref|YP_305087.1| - 1.4e-10 40.8 0.0 1.3e-09 37.6 0.0 2.0 1 1 0 1 1 1 1 Molybdopterin oxidoreductase TPP_enzyme_M PF00205.22 gi|73669072|ref|YP_305087.1| - 0.00088 19.0 0.0 0.0015 18.3 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Molybdopterin PF00384.22 gi|73669073|ref|YP_305088.1| - 2.2e-89 300.4 0.0 2.9e-89 300.0 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|73669073|ref|YP_305088.1| - 3.7e-33 113.9 0.0 6.4e-33 113.1 0.0 1.4 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|73669073|ref|YP_305088.1| - 5.1e-19 68.0 1.1 1.1e-18 66.9 0.3 2.0 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain Bac_DnaA PF00308.18 gi|73669073|ref|YP_305088.1| - 0.19 11.5 0.0 0.33 10.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial dnaA protein FrhB_FdhB_C PF04432.13 gi|73669074|ref|YP_305089.1| - 1.7e-33 115.7 0.7 8.3e-33 113.4 0.0 2.0 1 1 1 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|73669074|ref|YP_305089.1| - 2.6e-17 62.7 0.0 1.1e-16 60.7 0.0 2.0 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_10 PF13237.6 gi|73669074|ref|YP_305089.1| - 2.1e-09 37.4 7.0 0.00053 20.1 0.0 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73669074|ref|YP_305089.1| - 2.7e-08 34.2 4.5 2.7e-08 34.2 4.5 2.2 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73669074|ref|YP_305089.1| - 4e-08 32.7 17.5 5.9e-05 22.7 2.1 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73669074|ref|YP_305089.1| - 1.4e-07 31.9 3.7 1.4e-07 31.9 3.7 2.0 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73669074|ref|YP_305089.1| - 2.4e-06 27.6 12.4 3.2e-05 24.0 10.5 3.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73669074|ref|YP_305089.1| - 3.5e-06 27.5 12.5 1.4e-05 25.6 10.6 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73669074|ref|YP_305089.1| - 1.3e-05 24.9 16.6 0.0033 17.4 2.3 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_20 PF14691.6 gi|73669074|ref|YP_305089.1| - 3e-05 23.8 1.7 0.021 14.6 0.2 2.4 2 0 0 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 gi|73669074|ref|YP_305089.1| - 7.4e-05 22.9 3.5 0.09 13.0 0.1 2.7 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73669074|ref|YP_305089.1| - 8.5e-05 22.5 19.5 0.0026 17.8 2.5 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73669074|ref|YP_305089.1| - 0.00029 21.1 17.2 0.0036 17.7 1.5 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73669074|ref|YP_305089.1| - 0.0024 18.0 10.9 0.0024 18.0 10.9 2.4 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73669074|ref|YP_305089.1| - 0.017 15.7 13.7 0.73 10.4 3.3 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 gi|73669074|ref|YP_305089.1| - 0.065 14.2 16.0 1.7 9.6 2.9 3.2 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|73669074|ref|YP_305089.1| - 0.086 13.8 3.2 0.086 13.8 3.2 3.5 4 0 0 4 4 2 0 4Fe-4S binding domain c-SKI_SMAD_bind PF08782.10 gi|73669074|ref|YP_305089.1| - 0.1 12.8 3.8 6 7.2 0.2 2.4 2 0 0 2 2 2 0 c-SKI Smad4 binding domain Fer4_22 PF17179.4 gi|73669074|ref|YP_305089.1| - 0.15 12.9 10.9 1.9 9.4 1.5 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73669074|ref|YP_305089.1| - 0.91 10.3 6.8 9 7.1 0.4 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF4145 PF13643.6 gi|73669075|ref|YP_305090.1| - 1.9e-17 63.2 0.0 3.3e-17 62.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4145) RNHCP PF12647.7 gi|73669075|ref|YP_305090.1| - 0.0045 16.9 0.0 0.036 14.1 0.0 2.2 2 0 0 2 2 2 1 RNHCP domain PHP_C PF13263.6 gi|73669076|ref|YP_305091.1| - 0.00021 20.9 0.0 0.00054 19.7 0.0 1.7 1 0 0 1 1 1 1 PHP-associated PHP PF02811.19 gi|73669076|ref|YP_305091.1| - 0.0069 16.7 0.1 0.03 14.6 0.1 1.9 2 0 0 2 2 2 1 PHP domain DUF5327 PF17261.2 gi|73669076|ref|YP_305091.1| - 0.21 12.4 2.1 0.39 11.5 2.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5327) PAC2 PF09754.9 gi|73669077|ref|YP_305092.1| - 1.6e-54 185.2 0.0 1.8e-54 185.0 0.0 1.0 1 0 0 1 1 1 1 PAC2 family YfdX PF10938.8 gi|73669077|ref|YP_305092.1| - 0.088 12.7 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 YfdX protein Nop10p PF04135.12 gi|73669078|ref|YP_305093.1| - 7.1e-24 83.6 2.2 7.4e-24 83.5 2.2 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|73669078|ref|YP_305093.1| - 7.9e-06 25.3 0.8 9.5e-06 25.1 0.8 1.1 1 0 0 1 1 1 1 RecR protein DUF35_N PF12172.8 gi|73669078|ref|YP_305093.1| - 0.0004 20.2 1.1 0.00063 19.6 1.1 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF1272 PF06906.11 gi|73669078|ref|YP_305093.1| - 0.0064 16.6 3.1 0.0077 16.3 3.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) PolC_DP2 PF03833.13 gi|73669078|ref|YP_305093.1| - 0.021 12.7 0.4 0.022 12.7 0.4 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 NRDD PF13597.6 gi|73669078|ref|YP_305093.1| - 0.031 13.1 0.4 0.031 13.1 0.4 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase TF_Zn_Ribbon PF08271.12 gi|73669078|ref|YP_305093.1| - 0.038 13.5 5.6 1.5 8.4 0.6 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding zf-FPG_IleRS PF06827.14 gi|73669078|ref|YP_305093.1| - 0.17 11.8 5.3 1 9.3 0.5 2.4 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS zf-RRN7 PF11781.8 gi|73669078|ref|YP_305093.1| - 0.22 11.2 0.4 0.22 11.2 0.4 2.1 1 1 1 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Zn-ribbon_8 PF09723.10 gi|73669078|ref|YP_305093.1| - 0.32 11.2 4.6 4 7.6 4.6 2.1 1 1 0 1 1 1 0 Zinc ribbon domain zf-C2H2_4 PF13894.6 gi|73669078|ref|YP_305093.1| - 0.65 11.0 3.3 3.2 8.8 0.2 2.4 2 1 0 2 2 2 0 C2H2-type zinc finger EIF_2_alpha PF07541.12 gi|73669079|ref|YP_305094.1| - 2.5e-25 88.8 0.1 3.9e-25 88.2 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|73669079|ref|YP_305094.1| - 6e-14 52.1 0.3 1.7e-13 50.7 0.3 1.8 1 0 0 1 1 1 1 S1 RNA binding domain DUF4170 PF13773.6 gi|73669079|ref|YP_305094.1| - 0.13 12.5 0.0 0.33 11.1 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4170) Ribosomal_S27e PF01667.17 gi|73669080|ref|YP_305095.1| - 4.8e-25 87.0 1.0 5.3e-25 86.9 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 zf-C2H2_12 PF18658.1 gi|73669080|ref|YP_305095.1| - 0.002 17.6 0.1 0.0035 16.9 0.0 1.4 1 1 0 1 1 1 1 Zinc-finger C2H2-type Zn_Tnp_IS91 PF14319.6 gi|73669080|ref|YP_305095.1| - 0.0083 16.1 0.2 0.0087 16.1 0.2 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain zf-RING_10 PF16685.5 gi|73669080|ref|YP_305095.1| - 0.018 15.2 0.2 0.17 12.0 0.0 2.0 2 0 0 2 2 2 0 zinc RING finger of MSL2 HypA PF01155.19 gi|73669080|ref|YP_305095.1| - 0.023 14.7 0.3 0.026 14.5 0.3 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FYVE PF01363.21 gi|73669080|ref|YP_305095.1| - 0.029 14.5 0.4 0.033 14.3 0.4 1.2 1 0 0 1 1 1 0 FYVE zinc finger zf-BED PF02892.15 gi|73669080|ref|YP_305095.1| - 0.03 14.3 0.6 1.2 9.2 0.0 2.1 2 0 0 2 2 2 0 BED zinc finger zinc_ribbon_6 PF14599.6 gi|73669080|ref|YP_305095.1| - 0.11 12.5 2.9 0.5 10.4 2.9 2.0 2 1 1 3 3 3 0 Zinc-ribbon Ribosomal_L44 PF00935.19 gi|73669081|ref|YP_305096.1| - 8e-25 87.1 5.5 1e-24 86.8 5.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L44 Cys_rich_CPXG PF14255.6 gi|73669081|ref|YP_305096.1| - 0.08 12.9 1.6 0.099 12.6 0.1 1.8 2 0 0 2 2 2 0 Cysteine-rich CPXCG Zf_RING PF16744.5 gi|73669081|ref|YP_305096.1| - 0.16 12.1 2.8 0.21 11.8 0.8 1.9 2 0 0 2 2 2 0 KIAA1045 RING finger zf-C2H2_6 PF13912.6 gi|73669081|ref|YP_305096.1| - 0.18 11.9 0.9 0.18 11.9 0.9 2.3 3 0 0 3 3 3 0 C2H2-type zinc finger Phasin PF05597.11 gi|73669082|ref|YP_305097.1| - 0.099 12.6 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DNA_primase_S PF01896.19 gi|73669083|ref|YP_305098.1| - 1e-21 77.8 0.0 2e-21 76.8 0.0 1.5 1 1 0 1 1 1 1 DNA primase small subunit FGE-sulfatase PF03781.16 gi|73669084|ref|YP_305099.1| - 2.1e-50 171.7 3.6 1.6e-49 168.9 3.6 1.9 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 Kelch_6 PF13964.6 gi|73669084|ref|YP_305099.1| - 0.08 13.3 0.4 0.18 12.1 0.4 1.5 1 0 0 1 1 1 0 Kelch motif FGE-sulfatase PF03781.16 gi|73669086|ref|YP_305101.1| - 1.3e-52 179.0 9.8 6.9e-52 176.6 9.8 1.9 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 Peptidase_C14 PF00656.22 gi|73669086|ref|YP_305101.1| - 1.5e-14 54.6 0.1 3.1e-14 53.5 0.1 1.5 1 1 0 1 1 1 1 Caspase domain Peptidase_C13 PF01650.18 gi|73669086|ref|YP_305101.1| - 1.4e-05 24.8 0.0 3.4e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Peptidase C13 family Porin_OmpL1 PF11389.8 gi|73669086|ref|YP_305101.1| - 0.058 12.6 0.0 0.1 11.9 0.0 1.3 1 0 0 1 1 1 0 Leptospira porin protein OmpL1 DMAP_binding PF06464.11 gi|73669086|ref|YP_305101.1| - 0.08 13.8 1.4 0.19 12.6 1.4 1.6 1 1 0 1 1 1 0 DMAP1-binding Domain FbpA PF05833.11 gi|73669087|ref|YP_305102.1| - 2.1e-111 372.9 3.9 3.2e-111 372.3 3.9 1.2 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|73669087|ref|YP_305102.1| - 8.8e-26 90.7 0.0 1.7e-25 89.8 0.0 1.5 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 gi|73669087|ref|YP_305102.1| - 4.1e-05 23.7 0.0 0.00014 22.0 0.0 1.9 1 0 0 1 1 1 1 NFACT protein RNA binding domain Ribosomal_S13 PF00416.22 gi|73669087|ref|YP_305102.1| - 0.054 13.9 0.0 0.19 12.1 0.0 1.9 1 0 0 1 1 1 0 Ribosomal protein S13/S18 DUF5333 PF17267.2 gi|73669087|ref|YP_305102.1| - 0.061 13.5 0.0 1.2 9.3 0.0 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5333) NESP55 PF06390.12 gi|73669087|ref|YP_305102.1| - 5.9 6.4 13.3 0.046 13.3 2.8 2.1 2 0 0 2 2 2 0 Neuroendocrine-specific golgi protein P55 (NESP55) eRF1_1 PF03463.15 gi|73669088|ref|YP_305103.1| - 1.2e-27 96.4 0.9 1.9e-27 95.8 0.9 1.3 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|73669088|ref|YP_305103.1| - 3.8e-24 85.4 0.5 1e-23 84.0 0.2 1.9 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|73669088|ref|YP_305103.1| - 1.7e-10 41.3 0.0 8.5e-10 39.1 0.0 2.1 1 1 0 1 1 1 1 eRF1 domain 2 Radical_SAM PF04055.21 gi|73669088|ref|YP_305103.1| - 0.34 11.3 1.3 1.4 9.3 0.1 2.4 3 0 0 3 3 3 0 Radical SAM superfamily S-layer PF07752.11 gi|73669089|ref|YP_305104.1| - 2.3e-127 423.4 19.8 2.9e-64 216.6 5.1 2.1 2 0 0 2 2 2 2 S-layer protein NPHI_C PF08469.10 gi|73669089|ref|YP_305104.1| - 0.0035 17.3 0.4 4.1 7.4 0.1 2.6 2 0 0 2 2 2 2 Nucleoside triphosphatase I C-terminal TbpB_B_D PF01298.18 gi|73669089|ref|YP_305104.1| - 0.009 16.4 3.6 2.7 8.4 0.1 3.1 2 1 0 2 2 2 2 C-lobe and N-lobe beta barrels of Tf-binding protein B JmjC PF02373.22 gi|73669089|ref|YP_305104.1| - 0.012 16.0 0.0 10 6.6 0.0 2.6 2 0 0 2 2 2 0 JmjC domain, hydroxylase DUF1764 PF08576.10 gi|73669089|ref|YP_305104.1| - 0.042 14.8 0.5 4.1 8.4 0.0 2.7 2 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF1764) CDCA PF18484.1 gi|73669089|ref|YP_305104.1| - 0.08 12.8 0.0 15 5.4 0.0 2.4 2 0 0 2 2 2 0 Cadmium carbonic anhydrase repeat IBV_3C PF03620.13 gi|73669089|ref|YP_305104.1| - 0.095 13.2 0.2 30 5.2 0.0 2.5 2 0 0 2 2 2 0 IBV 3C protein RGI_lyase PF18370.1 gi|73669089|ref|YP_305104.1| - 0.1 12.9 1.7 21 5.5 0.1 2.8 2 0 0 2 2 2 0 Rhamnogalacturonan I lyases beta-sheet domain DUF4141 PF13605.6 gi|73669089|ref|YP_305104.1| - 0.16 11.2 2.5 13 5.1 0.2 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4141) FTP PF07504.13 gi|73669089|ref|YP_305104.1| - 0.18 11.7 3.3 16 5.4 0.1 3.2 3 0 0 3 3 3 0 Fungalysin/Thermolysin Propeptide Motif DUF3922 PF13059.6 gi|73669089|ref|YP_305104.1| - 0.24 11.9 8.4 3.4 8.2 1.1 2.9 2 2 0 2 2 2 0 Protein of unknown function (DUF3992) DUF1614 PF07758.11 gi|73669090|ref|YP_305105.1| - 5.8e-58 195.7 13.5 5.8e-58 195.7 13.5 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1614) DisA_N PF02457.16 gi|73669091|ref|YP_305106.1| - 1.8e-23 82.3 2.3 1.2e-21 76.5 0.3 2.4 2 0 0 2 2 2 2 DisA bacterial checkpoint controller nucleotide-binding Methyltransf_18 PF12847.7 gi|73669091|ref|YP_305106.1| - 0.062 13.2 0.1 0.14 12.1 0.1 1.5 1 0 0 1 1 1 0 Methyltransferase domain LigT_PEase PF02834.16 gi|73669092|ref|YP_305107.1| - 2.1e-28 98.3 0.1 4e-16 59.0 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|73669092|ref|YP_305107.1| - 9.3e-11 41.9 0.0 1.9e-10 40.9 0.0 1.3 1 1 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|73669092|ref|YP_305107.1| - 2.8e-07 30.6 0.0 3.2e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain Fer4_9 PF13187.6 gi|73669093|ref|YP_305108.1| - 0.025 14.8 3.7 0.14 12.4 0.7 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73669093|ref|YP_305108.1| - 0.044 14.7 3.7 1.8 9.6 0.7 2.8 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|73669093|ref|YP_305108.1| - 0.78 10.4 5.9 2.5e+02 2.4 10.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Rep_fac_C PF08542.11 gi|73669094|ref|YP_305109.1| - 2e-23 82.6 0.1 5.5e-23 81.2 0.1 1.8 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|73669094|ref|YP_305109.1| - 2.8e-18 66.6 0.0 8.1e-18 65.1 0.0 1.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|73669094|ref|YP_305109.1| - 7.6e-16 58.3 0.0 1.1e-12 48.0 0.0 2.3 1 1 0 1 1 1 1 DNA polymerase III, delta subunit RuvB_N PF05496.12 gi|73669094|ref|YP_305109.1| - 1.8e-07 31.0 0.0 3.8e-06 26.7 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|73669094|ref|YP_305109.1| - 2.4e-07 31.3 0.1 0.00016 22.1 0.0 2.6 2 1 1 3 3 2 1 AAA ATPase domain Rad17 PF03215.15 gi|73669094|ref|YP_305109.1| - 1.3e-06 28.5 0.0 2.3e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain DNA_pol3_delta PF06144.13 gi|73669094|ref|YP_305109.1| - 1.6e-05 24.8 0.0 4.6e-05 23.3 0.0 1.7 2 0 0 2 2 2 1 DNA polymerase III, delta subunit Mg_chelatase PF01078.21 gi|73669094|ref|YP_305109.1| - 3.3e-05 23.4 0.0 0.014 14.8 0.0 3.0 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 gi|73669094|ref|YP_305109.1| - 4.3e-05 23.4 0.0 9.2e-05 22.3 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_assoc_2 PF16193.5 gi|73669094|ref|YP_305109.1| - 5.6e-05 23.4 0.0 0.00012 22.4 0.0 1.6 1 0 0 1 1 1 1 AAA C-terminal domain AAA_14 PF13173.6 gi|73669094|ref|YP_305109.1| - 9.5e-05 22.4 0.0 0.00019 21.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|73669094|ref|YP_305109.1| - 0.00048 20.4 0.2 2.1 8.6 0.0 3.1 2 1 0 3 3 3 2 AAA domain TIP49 PF06068.13 gi|73669094|ref|YP_305109.1| - 0.0012 18.1 0.0 0.004 16.4 0.0 1.7 1 1 1 2 2 2 1 TIP49 P-loop domain AAA_5 PF07728.14 gi|73669094|ref|YP_305109.1| - 0.0022 18.0 0.0 0.01 15.8 0.0 2.1 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) ResIII PF04851.15 gi|73669094|ref|YP_305109.1| - 0.0023 18.0 0.0 0.099 12.6 0.0 2.4 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit AAA_2 PF07724.14 gi|73669094|ref|YP_305109.1| - 0.012 15.8 0.0 0.023 14.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Sigma54_activat PF00158.26 gi|73669094|ref|YP_305109.1| - 0.018 14.7 0.0 3.5 7.3 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain SNF2_N PF00176.23 gi|73669094|ref|YP_305109.1| - 0.02 13.6 0.0 0.052 12.3 0.0 1.6 1 1 1 2 2 2 0 SNF2 family N-terminal domain AAA_24 PF13479.6 gi|73669094|ref|YP_305109.1| - 0.028 14.2 0.0 0.11 12.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain TPR_9 PF13371.6 gi|73669094|ref|YP_305109.1| - 0.033 14.3 0.0 0.47 10.6 0.0 2.3 1 1 1 2 2 2 0 Tetratricopeptide repeat AAA_25 PF13481.6 gi|73669094|ref|YP_305109.1| - 0.041 13.4 0.0 0.075 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|73669094|ref|YP_305109.1| - 0.053 13.3 0.0 0.16 11.7 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_18 PF13238.6 gi|73669094|ref|YP_305109.1| - 0.057 14.0 0.0 0.18 12.4 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 gi|73669094|ref|YP_305109.1| - 0.15 11.8 0.0 0.46 10.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain Fer4_12 PF13353.6 gi|73669094|ref|YP_305109.1| - 0.19 12.0 0.0 0.39 11.0 0.0 1.6 1 0 0 1 1 1 0 4Fe-4S single cluster domain Viral_helicase1 PF01443.18 gi|73669094|ref|YP_305109.1| - 0.19 11.4 0.0 0.35 10.6 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Sm_multidrug_ex PF06695.11 gi|73669095|ref|YP_305110.1| - 1.3e-39 135.5 3.7 2.2e-39 134.9 3.7 1.3 1 0 0 1 1 1 1 Putative small multi-drug export protein CBFD_NFYB_HMF PF00808.23 gi|73669096|ref|YP_305111.1| - 8.5e-16 58.0 0.1 1e-15 57.8 0.1 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|73669096|ref|YP_305111.1| - 9.4e-10 39.0 0.1 1.2e-09 38.6 0.1 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Bromo_TP PF07524.13 gi|73669096|ref|YP_305111.1| - 3.6e-06 26.9 0.0 4.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Bromodomain associated CENP-T_C PF15511.6 gi|73669096|ref|YP_305111.1| - 8.2e-06 25.9 0.0 8.6e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TFIID-31kDa PF02291.15 gi|73669096|ref|YP_305111.1| - 2.3e-05 24.5 0.0 2.8e-05 24.2 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit CENP-S PF15630.6 gi|73669096|ref|YP_305111.1| - 6.8e-05 23.2 0.0 7.8e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 CENP-S protein TAF PF02969.17 gi|73669096|ref|YP_305111.1| - 0.0024 18.0 0.1 0.0026 17.9 0.1 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID-18kDa PF02269.16 gi|73669096|ref|YP_305111.1| - 0.011 15.8 0.0 0.012 15.6 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit DUF1931 PF09123.11 gi|73669096|ref|YP_305111.1| - 0.028 14.5 0.1 0.03 14.4 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1931) Peptidase_C39 PF03412.15 gi|73669096|ref|YP_305111.1| - 0.065 13.0 0.1 0.071 12.9 0.1 1.1 1 0 0 1 1 1 0 Peptidase C39 family TFIID_20kDa PF03847.13 gi|73669096|ref|YP_305111.1| - 0.11 13.0 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A PCP_red PF08369.10 gi|73669096|ref|YP_305111.1| - 0.32 11.2 2.4 1.1 9.6 0.7 2.1 2 0 0 2 2 2 0 Proto-chlorophyllide reductase 57 kD subunit Methyltransf_25 PF13649.6 gi|73669097|ref|YP_305112.1| - 2.2e-06 28.3 0.0 6.9e-06 26.7 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669097|ref|YP_305112.1| - 0.00011 22.8 0.0 0.0007 20.2 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|73669097|ref|YP_305112.1| - 0.022 13.7 0.0 0.038 13.0 0.0 1.3 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase PYC_OADA PF02436.18 gi|73669098|ref|YP_305113.1| - 1.5e-60 204.4 0.1 2.8e-60 203.5 0.1 1.4 1 0 0 1 1 1 1 Conserved carboxylase domain HMGL-like PF00682.19 gi|73669098|ref|YP_305113.1| - 2.3e-48 165.0 0.0 3.7e-48 164.4 0.0 1.3 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.22 gi|73669098|ref|YP_305113.1| - 3.2e-17 62.1 5.7 3.4e-17 62.0 3.7 2.0 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|73669098|ref|YP_305113.1| - 6.4e-10 38.7 0.1 7.7e-05 22.4 0.0 2.6 1 1 1 2 2 2 2 Biotin-lipoyl like RnfC_N PF13375.6 gi|73669098|ref|YP_305113.1| - 0.00013 21.8 2.4 0.00055 19.8 1.5 2.5 2 1 0 2 2 2 1 RnfC Barrel sandwich hybrid domain HlyD_3 PF13437.6 gi|73669098|ref|YP_305113.1| - 0.00026 21.7 0.3 0.16 12.7 0.0 2.7 2 0 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 gi|73669098|ref|YP_305113.1| - 0.00089 18.5 0.4 0.045 13.0 0.0 2.4 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion DUF561 PF04481.12 gi|73669098|ref|YP_305113.1| - 0.031 13.4 0.5 5.7 6.0 0.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF561) CPSase_L_D2 PF02786.17 gi|73669099|ref|YP_305114.1| - 1.3e-79 266.6 0.1 2.1e-79 265.9 0.1 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|73669099|ref|YP_305114.1| - 9.1e-49 164.6 0.1 3.8e-47 159.4 0.1 2.6 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|73669099|ref|YP_305114.1| - 1.7e-43 147.1 0.0 3.3e-43 146.2 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 gi|73669099|ref|YP_305114.1| - 3.9e-13 49.4 0.1 1.2e-12 47.8 0.1 1.8 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.11 gi|73669099|ref|YP_305114.1| - 1.2e-07 31.5 0.0 2.3e-06 27.3 0.0 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp PF02222.22 gi|73669099|ref|YP_305114.1| - 3.8e-07 29.9 0.1 7.6e-07 28.9 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|73669099|ref|YP_305114.1| - 1.4e-06 28.4 0.1 2.9e-06 27.4 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|73669099|ref|YP_305114.1| - 9e-05 22.3 0.3 0.00017 21.4 0.0 1.7 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_Ter PF15632.6 gi|73669099|ref|YP_305114.1| - 0.0024 17.6 0.0 0.0063 16.3 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_5 PF13549.6 gi|73669099|ref|YP_305114.1| - 0.0026 17.3 0.1 0.0078 15.7 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|73669099|ref|YP_305114.1| - 0.014 15.0 0.0 0.029 14.0 0.0 1.7 1 1 0 1 1 1 0 ATP-grasp domain Oxidored_nitro PF00148.19 gi|73669099|ref|YP_305114.1| - 0.015 14.0 0.0 0.022 13.5 0.0 1.4 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase ExbD PF02472.16 gi|73669099|ref|YP_305114.1| - 0.13 12.4 0.0 1.4 9.1 0.0 2.3 2 0 0 2 2 2 0 Biopolymer transport protein ExbD/TolR OAD_gamma PF04277.13 gi|73669099|ref|YP_305114.1| - 0.2 12.3 5.1 0.41 11.3 5.1 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain BPL_LplA_LipB PF03099.19 gi|73669100|ref|YP_305115.1| - 2.7e-19 69.4 0.0 5.4e-19 68.4 0.0 1.5 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.12 gi|73669100|ref|YP_305115.1| - 1.3e-16 60.2 0.7 3.7e-16 58.8 0.1 2.0 2 0 0 2 2 2 1 HTH domain BPL_C PF02237.17 gi|73669100|ref|YP_305115.1| - 1.4e-09 37.7 0.1 3.4e-09 36.4 0.1 1.6 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain BPL_LplA_LipB_2 PF16917.5 gi|73669100|ref|YP_305115.1| - 1.1e-05 25.1 0.0 1.5e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_24 PF13412.6 gi|73669100|ref|YP_305115.1| - 0.00011 21.7 0.0 0.00023 20.7 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF2642 PF10842.8 gi|73669100|ref|YP_305115.1| - 0.13 12.1 0.3 0.69 9.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2642) S-layer PF07752.11 gi|73669101|ref|YP_305116.1| - 2.6e-11 43.1 0.2 3.3e-11 42.7 0.2 1.1 1 0 0 1 1 1 1 S-layer protein Laminin_I PF06008.14 gi|73669102|ref|YP_305117.1| - 1.2e-05 25.1 32.1 0.007 16.1 16.9 2.1 2 0 0 2 2 2 2 Laminin Domain I MAD PF05557.13 gi|73669102|ref|YP_305117.1| - 0.00014 20.4 40.6 0.015 13.7 13.6 2.1 1 1 1 2 2 2 2 Mitotic checkpoint protein Baculo_PEP_C PF04513.12 gi|73669102|ref|YP_305117.1| - 0.00041 20.4 9.3 0.0085 16.1 3.3 2.6 2 1 0 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus CENP-F_leu_zip PF10473.9 gi|73669102|ref|YP_305117.1| - 0.0017 18.4 13.5 0.0017 18.4 13.5 2.6 2 1 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3450 PF11932.8 gi|73669102|ref|YP_305117.1| - 0.008 15.5 5.5 0.008 15.5 5.5 3.7 1 1 3 4 4 4 2 Protein of unknown function (DUF3450) GAS PF13851.6 gi|73669102|ref|YP_305117.1| - 0.0087 15.4 14.4 0.0087 15.4 14.4 3.2 1 1 1 3 3 3 1 Growth-arrest specific micro-tubule binding KASH_CCD PF14662.6 gi|73669102|ref|YP_305117.1| - 0.011 15.5 11.3 0.011 15.5 11.3 2.9 2 1 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF1664 PF07889.12 gi|73669102|ref|YP_305117.1| - 0.015 15.3 23.3 1.2 9.2 2.1 4.1 2 2 0 3 3 3 0 Protein of unknown function (DUF1664) HsbA PF12296.8 gi|73669102|ref|YP_305117.1| - 0.022 15.2 0.3 3.8 7.9 0.0 3.7 2 2 4 6 6 6 0 Hydrophobic surface binding protein A FUSC PF04632.12 gi|73669102|ref|YP_305117.1| - 0.045 12.3 3.3 0.14 10.7 0.8 2.2 1 1 0 2 2 2 0 Fusaric acid resistance protein family Fez1 PF06818.15 gi|73669102|ref|YP_305117.1| - 0.05 14.1 35.7 0.18 12.3 14.1 2.6 1 1 1 2 2 2 0 Fez1 Seryl_tRNA_N PF02403.22 gi|73669102|ref|YP_305117.1| - 0.06 13.6 39.8 0.12 12.6 8.1 4.4 1 1 3 4 4 4 0 Seryl-tRNA synthetase N-terminal domain IL5 PF02025.15 gi|73669102|ref|YP_305117.1| - 0.066 13.5 9.7 0.082 13.2 0.3 3.7 2 2 1 4 4 4 0 Interleukin 5 Atg14 PF10186.9 gi|73669102|ref|YP_305117.1| - 0.1 11.7 43.5 0.45 9.5 15.0 3.5 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 gi|73669102|ref|YP_305117.1| - 0.12 11.2 40.7 0.022 13.6 14.4 2.9 1 1 2 3 3 3 0 Spc7 kinetochore protein FAM76 PF16046.5 gi|73669102|ref|YP_305117.1| - 0.19 11.1 34.4 0.24 10.7 16.1 2.1 2 0 0 2 2 2 0 FAM76 protein NPV_P10 PF05531.12 gi|73669102|ref|YP_305117.1| - 0.3 11.6 15.2 2.1 8.9 1.3 4.8 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF3584 PF12128.8 gi|73669102|ref|YP_305117.1| - 0.53 7.7 35.3 2 5.8 35.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) DUF948 PF06103.11 gi|73669102|ref|YP_305117.1| - 0.77 10.1 12.9 16 5.8 1.8 4.6 2 2 2 4 4 4 0 Bacterial protein of unknown function (DUF948) TolA_bind_tri PF16331.5 gi|73669102|ref|YP_305117.1| - 0.97 9.6 16.0 0.76 9.9 4.7 4.1 2 2 1 3 3 3 0 TolA binding protein trimerisation ATG16 PF08614.11 gi|73669102|ref|YP_305117.1| - 1.7 8.8 36.4 4.9 7.3 11.4 2.6 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) Filament PF00038.21 gi|73669102|ref|YP_305117.1| - 1.7 8.1 35.8 7e+02 -0.4 35.8 3.1 1 1 0 1 1 1 0 Intermediate filament protein DUF5600 PF18150.1 gi|73669102|ref|YP_305117.1| - 2.7 8.6 10.9 0.059 14.0 2.0 2.7 2 2 0 2 2 2 0 Domain of unknown function (DUF5600) COG2 PF06148.11 gi|73669102|ref|YP_305117.1| - 2.7 8.1 20.9 3.3 7.8 4.6 4.1 2 2 3 5 5 5 0 COG (conserved oligomeric Golgi) complex component, COG2 APG6_N PF17675.1 gi|73669102|ref|YP_305117.1| - 2.9 8.4 43.5 11 6.6 13.8 3.8 1 1 2 3 3 3 0 Apg6 coiled-coil region DUF4407 PF14362.6 gi|73669102|ref|YP_305117.1| - 4.8 6.4 28.5 0.73 9.1 7.8 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) IFT57 PF10498.9 gi|73669102|ref|YP_305117.1| - 5.8 5.8 33.8 0.14 11.1 9.0 2.9 1 1 1 3 3 3 0 Intra-flagellar transport protein 57 Tup_N PF08581.10 gi|73669102|ref|YP_305117.1| - 6.2 7.2 27.3 0.84 10.0 1.8 4.9 1 1 3 4 4 4 0 Tup N-terminal TACC_C PF05010.14 gi|73669102|ref|YP_305117.1| - 6.8 6.4 35.5 1.1 9.0 11.5 2.4 1 1 0 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal AAA_13 PF13166.6 gi|73669102|ref|YP_305117.1| - 7.6 5.0 35.5 1.7 7.2 8.7 2.1 1 1 0 2 2 2 0 AAA domain FlaC_arch PF05377.11 gi|73669102|ref|YP_305117.1| - 7.9 7.0 21.0 3.6 8.0 3.3 5.2 3 2 2 5 5 5 0 Flagella accessory protein C (FlaC) zf-C4H2 PF10146.9 gi|73669102|ref|YP_305117.1| - 7.9 6.7 34.5 1.7 8.9 10.6 2.2 1 1 1 2 2 2 0 Zinc finger-containing protein TPR_MLP1_2 PF07926.12 gi|73669102|ref|YP_305117.1| - 8.2 6.5 38.1 0.85 9.7 10.9 4.5 1 1 3 4 4 4 0 TPR/MLP1/MLP2-like protein DUF848 PF05852.11 gi|73669102|ref|YP_305117.1| - 8.7 6.5 30.6 4.1 7.5 8.0 3.8 1 1 1 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) CHASE3 PF05227.13 gi|73669103|ref|YP_305118.1| - 0.61 10.0 9.2 0.11 12.3 4.5 1.9 2 0 0 2 2 2 0 CHASE3 domain V_ATPase_I PF01496.19 gi|73669103|ref|YP_305118.1| - 1.8 6.4 19.9 0.054 11.4 9.4 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family DUF424 PF04242.13 gi|73669104|ref|YP_305119.1| - 8.5e-31 106.1 0.2 9.8e-31 105.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) MCM PF00493.23 gi|73669105|ref|YP_305120.1| - 1.4e-96 321.9 0.0 2e-96 321.4 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|73669105|ref|YP_305120.1| - 2.2e-35 121.3 0.0 3.7e-35 120.5 0.0 1.3 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|73669105|ref|YP_305120.1| - 3.8e-29 101.0 1.0 2.4e-28 98.4 0.8 2.3 2 0 0 2 2 2 1 MCM AAA-lid domain MCM_N PF14551.6 gi|73669105|ref|YP_305120.1| - 5.3e-08 33.4 0.1 3.9e-07 30.6 0.1 2.4 2 0 0 2 2 2 1 MCM N-terminal domain Mg_chelatase PF01078.21 gi|73669105|ref|YP_305120.1| - 1.8e-06 27.5 0.1 0.00014 21.3 0.0 2.3 1 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|73669105|ref|YP_305120.1| - 6.5e-06 26.2 0.0 1.5e-05 25.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|73669105|ref|YP_305120.1| - 0.0016 18.3 0.0 0.0047 16.8 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Imm74 PF15603.6 gi|73669105|ref|YP_305120.1| - 0.065 13.4 0.2 0.31 11.2 0.1 2.3 2 0 0 2 2 2 0 Immunity protein 74 AAA_33 PF13671.6 gi|73669105|ref|YP_305120.1| - 0.084 13.0 0.0 4.9 7.3 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|73669105|ref|YP_305120.1| - 0.099 13.0 0.3 0.58 10.5 0.0 2.4 2 0 0 2 2 2 0 AAA ATPase domain DUF4072 PF13284.6 gi|73669105|ref|YP_305120.1| - 0.1 13.1 0.3 0.27 11.7 0.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4072) SpoU_methylase PF00588.19 gi|73669106|ref|YP_305121.1| - 9.3e-33 113.4 0.0 1.2e-32 113.0 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family Methyltrn_RNA_4 PF09936.9 gi|73669106|ref|YP_305121.1| - 0.048 13.5 0.0 0.17 11.7 0.0 1.7 1 1 1 2 2 2 0 SAM-dependent RNA methyltransferase Rubrerythrin PF02915.17 gi|73669107|ref|YP_305122.1| - 4.6e-15 56.2 2.0 2e-13 50.9 2.0 2.0 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|73669107|ref|YP_305122.1| - 1e-05 25.5 1.6 0.0031 17.5 0.0 2.1 1 1 1 2 2 2 2 Ferritin-like domain FA_desaturase_2 PF03405.14 gi|73669107|ref|YP_305122.1| - 0.011 14.6 0.2 1.1 8.0 0.1 2.0 1 1 1 2 2 2 0 Fatty acid desaturase NIR_SIR PF01077.22 gi|73669108|ref|YP_305123.1| - 9.3e-29 100.0 0.0 1.3e-28 99.5 0.0 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|73669108|ref|YP_305123.1| - 6.9e-17 61.1 0.0 1.3e-16 60.2 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain PMBR PF09373.10 gi|73669108|ref|YP_305123.1| - 0.029 14.5 0.0 0.089 13.0 0.0 1.9 2 0 0 2 2 2 0 Pseudomurein-binding repeat Nitrate_red_gam PF02665.14 gi|73669109|ref|YP_305124.1| - 5e-07 29.5 12.9 5e-06 26.2 2.9 2.7 3 0 0 3 3 3 2 Nitrate reductase gamma subunit Ni_hydr_CYTB PF01292.20 gi|73669109|ref|YP_305124.1| - 6 6.4 18.2 85 2.7 7.2 2.7 1 1 1 2 2 2 0 Prokaryotic cytochrome b561 CCG PF02754.16 gi|73669110|ref|YP_305125.1| - 9.1e-33 112.3 7.8 6.9e-17 61.4 0.0 2.7 3 0 0 3 3 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|73669110|ref|YP_305125.1| - 9.6e-11 42.0 2.7 9.6e-11 42.0 2.7 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73669110|ref|YP_305125.1| - 6.4e-07 29.8 1.7 6.4e-07 29.8 1.7 3.1 4 1 0 4 4 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73669110|ref|YP_305125.1| - 1.1e-06 29.2 6.3 1.1e-06 29.2 6.3 2.5 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73669110|ref|YP_305125.1| - 1.5e-06 28.2 14.5 1.8e-05 24.7 10.1 3.7 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73669110|ref|YP_305125.1| - 1.7e-05 24.9 20.4 5.5e-05 23.2 9.9 3.3 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73669110|ref|YP_305125.1| - 2.8e-05 25.0 6.2 2.8e-05 25.0 6.2 2.4 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|73669110|ref|YP_305125.1| - 0.00015 21.9 3.4 0.25 11.5 0.4 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73669110|ref|YP_305125.1| - 0.0019 18.3 8.7 0.14 12.3 0.7 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73669110|ref|YP_305125.1| - 0.004 17.1 1.9 0.004 17.1 1.9 3.2 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73669110|ref|YP_305125.1| - 0.0079 16.2 2.6 0.0079 16.2 2.6 3.1 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4 PF00037.27 gi|73669110|ref|YP_305125.1| - 0.012 15.5 2.8 0.012 15.5 2.8 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|73669110|ref|YP_305125.1| - 0.054 14.3 13.6 0.22 12.4 0.3 3.7 4 0 0 4 4 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73669110|ref|YP_305125.1| - 1.4 9.7 12.5 4.3 8.2 0.1 3.9 4 0 0 4 4 4 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|73669110|ref|YP_305125.1| - 3.4 8.8 22.2 0.11 13.5 4.3 3.4 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73669110|ref|YP_305125.1| - 4.3 8.1 24.9 0.075 13.6 2.1 3.6 4 0 0 4 4 3 0 4Fe-4S binding domain zf-FLZ PF04570.14 gi|73669110|ref|YP_305125.1| - 6.6 6.3 7.5 0.54 9.8 0.1 2.9 3 0 0 3 3 3 0 zinc-finger of the FCS-type, C2-C2 DUF116 PF01976.17 gi|73669111|ref|YP_305126.1| - 5.6e-45 152.6 4.0 6.8e-45 152.4 4.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 ABC2_membrane PF01061.24 gi|73669111|ref|YP_305126.1| - 0.0046 16.4 0.6 0.0063 16.0 0.6 1.1 1 0 0 1 1 1 1 ABC-2 type transporter DUF116 PF01976.17 gi|73669112|ref|YP_305127.1| - 3e-43 147.0 0.1 3.7e-43 146.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF116 FAD_binding_3 PF01494.19 gi|73669113|ref|YP_305128.1| - 5.3e-15 55.5 0.0 1.4e-14 54.1 0.0 1.6 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|73669113|ref|YP_305128.1| - 3.1e-09 36.9 0.0 4.8e-05 23.1 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|73669113|ref|YP_305128.1| - 8.6e-08 31.8 0.0 1.4e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|73669113|ref|YP_305128.1| - 8.6e-08 31.3 0.0 1.8e-05 23.6 0.0 2.1 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_3 PF13738.6 gi|73669113|ref|YP_305128.1| - 1.7e-07 30.8 0.5 3.5e-06 26.5 0.5 2.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|73669113|ref|YP_305128.1| - 3.3e-06 27.2 0.0 1.1e-05 25.6 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 gi|73669113|ref|YP_305128.1| - 3.5e-06 26.1 0.0 0.0025 16.7 0.0 2.7 2 1 0 2 2 2 2 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|73669113|ref|YP_305128.1| - 4e-06 26.1 0.0 1.4e-05 24.4 0.0 1.9 1 1 0 1 1 1 1 Lycopene cyclase protein Thi4 PF01946.17 gi|73669113|ref|YP_305128.1| - 1.4e-05 24.4 0.0 3.1e-05 23.3 0.0 1.6 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 gi|73669113|ref|YP_305128.1| - 5.5e-05 22.4 0.0 8.5e-05 21.8 0.0 1.3 1 1 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|73669113|ref|YP_305128.1| - 0.00014 21.0 0.0 0.00023 20.4 0.0 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|73669113|ref|YP_305128.1| - 0.00037 20.0 0.0 0.00047 19.6 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase ApbA PF02558.16 gi|73669113|ref|YP_305128.1| - 0.022 14.4 0.0 0.039 13.6 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 gi|73669113|ref|YP_305128.1| - 0.07 13.1 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 FAD-NAD(P)-binding Shikimate_DH PF01488.20 gi|73669113|ref|YP_305128.1| - 0.11 12.6 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 gi|73669113|ref|YP_305128.1| - 0.15 12.5 0.0 0.32 11.5 0.0 1.6 1 1 0 1 1 1 0 Putative NAD(P)-binding TrkA_N PF02254.18 gi|73669113|ref|YP_305128.1| - 0.17 12.2 0.0 0.34 11.2 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|73669113|ref|YP_305128.1| - 0.18 11.0 0.0 0.32 10.3 0.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain XdhC_C PF13478.6 gi|73669113|ref|YP_305128.1| - 0.2 12.2 0.0 0.33 11.4 0.0 1.3 1 0 0 1 1 1 0 XdhC Rossmann domain Pyr_redox PF00070.27 gi|73669113|ref|YP_305128.1| - 0.21 12.2 0.3 2.7 8.6 0.0 2.6 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|73669114|ref|YP_305129.1| - 1.9e-11 43.8 0.2 3.8e-09 36.3 0.1 2.5 2 1 0 2 2 2 2 FAD binding domain Pyr_redox_3 PF13738.6 gi|73669114|ref|YP_305129.1| - 2.7e-07 30.1 0.4 3.1e-06 26.7 0.4 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|73669114|ref|YP_305129.1| - 2.9e-07 30.0 0.0 4.4e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|73669114|ref|YP_305129.1| - 8.5e-06 25.4 0.0 1.1e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|73669114|ref|YP_305129.1| - 3.4e-05 22.7 0.1 0.00076 18.3 0.0 2.1 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 gi|73669114|ref|YP_305129.1| - 0.0002 20.6 0.1 0.00045 19.4 0.1 1.6 1 1 0 1 1 1 1 Glucose inhibited division protein A DAO PF01266.24 gi|73669114|ref|YP_305129.1| - 0.00031 20.4 0.3 0.048 13.2 0.1 2.2 1 1 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|73669114|ref|YP_305129.1| - 0.00065 18.7 0.0 0.26 10.1 0.0 2.4 2 1 0 2 2 2 2 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|73669114|ref|YP_305129.1| - 0.0017 17.5 0.0 0.0035 16.5 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|73669114|ref|YP_305129.1| - 0.0043 17.3 0.0 0.013 15.7 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|73669114|ref|YP_305129.1| - 0.0048 16.2 0.0 0.0077 15.5 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 gi|73669114|ref|YP_305129.1| - 0.11 11.5 0.0 0.48 9.4 0.0 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein Pyr_redox PF00070.27 gi|73669114|ref|YP_305129.1| - 0.17 12.4 0.2 28 5.4 0.0 2.9 2 1 1 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|73669115|ref|YP_305130.1| - 7.3e-07 28.9 0.0 1e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|73669115|ref|YP_305130.1| - 1.1e-06 28.1 0.0 0.00013 21.3 0.0 2.5 2 1 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|73669115|ref|YP_305130.1| - 5.5e-06 25.8 0.2 0.062 12.5 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|73669115|ref|YP_305130.1| - 2e-05 24.0 0.4 0.004 16.4 0.0 2.1 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|73669115|ref|YP_305130.1| - 3.5e-05 22.9 0.0 0.024 13.5 0.0 2.4 1 1 1 2 2 2 2 Tryptophan halogenase HI0933_like PF03486.14 gi|73669115|ref|YP_305130.1| - 4.4e-05 22.4 0.0 0.0075 15.0 0.0 2.5 3 0 0 3 3 3 2 HI0933-like protein DAO PF01266.24 gi|73669115|ref|YP_305130.1| - 0.0001 22.0 0.0 0.26 10.8 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|73669115|ref|YP_305130.1| - 0.0014 17.8 0.0 0.0065 15.6 0.0 2.0 3 0 0 3 3 3 1 FAD binding domain Pyr_redox PF00070.27 gi|73669115|ref|YP_305130.1| - 0.0048 17.4 0.2 0.92 10.1 0.1 2.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|73669115|ref|YP_305130.1| - 0.0097 15.0 0.0 0.013 14.6 0.0 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|73669115|ref|YP_305130.1| - 0.012 15.9 0.1 0.081 13.2 0.0 2.3 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|73669115|ref|YP_305130.1| - 0.017 14.4 0.0 0.03 13.6 0.0 1.4 1 0 0 1 1 1 0 Thi4 family NAD_binding_9 PF13454.6 gi|73669115|ref|YP_305130.1| - 0.038 14.0 3.9 26 4.8 0.0 3.7 3 1 1 4 4 4 0 FAD-NAD(P)-binding Dus PF01207.17 gi|73669116|ref|YP_305131.1| - 2.1e-13 50.1 0.1 3.9e-13 49.2 0.1 1.4 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|73669116|ref|YP_305131.1| - 9.7e-05 21.9 0.2 0.00018 21.1 0.2 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.25 gi|73669116|ref|YP_305131.1| - 0.012 14.7 0.8 0.018 14.0 0.8 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain CitG PF01874.16 gi|73669117|ref|YP_305132.1| - 3.4e-73 246.8 0.0 3.8e-73 246.6 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase DUF447 PF04289.12 gi|73669118|ref|YP_305133.1| - 7.6e-52 175.6 0.0 8.7e-52 175.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) SNARE_assoc PF09335.11 gi|73669119|ref|YP_305134.1| - 1.5e-13 51.3 7.1 1.5e-13 51.3 7.1 1.9 2 0 0 2 2 2 1 SNARE associated Golgi protein PIP49_N PF14875.6 gi|73669119|ref|YP_305134.1| - 0.28 11.1 1.1 2.1 8.2 0.0 2.2 2 0 0 2 2 2 0 N-term cysteine-rich ER, FAM69 Flavoprotein PF02441.19 gi|73669121|ref|YP_305136.1| - 9.2e-16 58.0 0.0 1.4e-15 57.4 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein Fer4_7 PF12838.7 gi|73669121|ref|YP_305136.1| - 2.4e-07 31.2 3.4 0.00045 20.7 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73669121|ref|YP_305136.1| - 1.2e-06 28.1 13.0 1.2e-06 28.0 2.0 3.1 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73669121|ref|YP_305136.1| - 5.5e-06 27.2 7.7 0.0014 19.5 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_11 PF13247.6 gi|73669121|ref|YP_305136.1| - 0.00011 22.2 1.5 0.00017 21.7 1.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73669121|ref|YP_305136.1| - 0.00012 22.1 9.8 0.0023 18.0 11.6 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73669121|ref|YP_305136.1| - 0.00031 20.8 21.6 0.0045 17.1 1.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73669121|ref|YP_305136.1| - 0.00055 19.9 14.0 0.0073 16.4 1.7 2.5 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73669121|ref|YP_305136.1| - 0.00067 19.6 11.1 0.004 17.2 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73669121|ref|YP_305136.1| - 0.00087 19.4 8.5 0.0015 18.6 8.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73669121|ref|YP_305136.1| - 0.04 14.5 11.1 0.085 13.4 0.7 2.3 1 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73669121|ref|YP_305136.1| - 4 8.2 9.7 1.3 9.8 0.2 3.0 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|73669121|ref|YP_305136.1| - 5.4 7.5 12.3 0.48 10.9 1.4 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain ABC_tran PF00005.27 gi|73669122|ref|YP_305137.1| - 1.2e-28 100.3 0.0 1.7e-28 99.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669122|ref|YP_305137.1| - 9.5e-05 22.3 0.6 0.0023 17.8 0.1 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73669122|ref|YP_305137.1| - 0.00018 21.0 0.1 0.00066 19.2 0.1 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73669122|ref|YP_305137.1| - 0.012 15.4 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|73669122|ref|YP_305137.1| - 0.06 13.3 0.0 0.093 12.6 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 gi|73669123|ref|YP_305138.1| - 1.4e-20 74.2 0.0 2.2e-20 73.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|73669123|ref|YP_305138.1| - 5.9e-15 55.5 0.2 1.4e-14 54.3 0.2 1.7 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_7 PF12775.7 gi|73669123|ref|YP_305138.1| - 6.6e-05 22.5 0.0 0.0001 21.8 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_29 PF13555.6 gi|73669123|ref|YP_305138.1| - 0.003 17.3 0.0 0.006 16.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|73669123|ref|YP_305138.1| - 0.0045 17.3 0.0 0.008 16.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|73669123|ref|YP_305138.1| - 0.015 15.7 0.0 0.025 15.0 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|73669123|ref|YP_305138.1| - 0.015 15.2 0.2 0.028 14.3 0.2 1.4 1 0 0 1 1 1 0 RsgA GTPase Mg_chelatase PF01078.21 gi|73669123|ref|YP_305138.1| - 0.017 14.5 0.0 0.029 13.8 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|73669123|ref|YP_305138.1| - 0.02 14.6 0.0 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Hexapep PF00132.24 gi|73669123|ref|YP_305138.1| - 0.021 14.6 0.0 0.042 13.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) SMC_N PF02463.19 gi|73669123|ref|YP_305138.1| - 0.022 14.2 0.1 0.056 12.9 0.1 1.6 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain Sigma54_activat PF00158.26 gi|73669123|ref|YP_305138.1| - 0.026 14.2 0.0 0.043 13.5 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain T2SSE PF00437.20 gi|73669123|ref|YP_305138.1| - 0.026 13.6 0.1 0.05 12.6 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 gi|73669123|ref|YP_305138.1| - 0.069 13.5 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain BPD_transp_1 PF00528.22 gi|73669124|ref|YP_305139.1| - 1.4e-18 67.3 10.3 1.4e-18 67.3 10.3 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|73669124|ref|YP_305139.1| - 0.041 13.9 0.5 0.041 13.9 0.5 2.8 2 1 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|73669125|ref|YP_305140.1| - 2.1e-38 131.9 12.1 3e-38 131.4 12.1 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|73669126|ref|YP_305141.1| - 4.1e-68 230.0 3.6 5.8e-68 229.6 3.6 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle PHP PF02811.19 gi|73669127|ref|YP_305142.1| - 1.8e-07 31.6 0.0 3.6e-07 30.6 0.0 1.6 1 1 0 1 1 1 1 PHP domain EFhand_Ca_insen PF08726.10 gi|73669127|ref|YP_305142.1| - 0.00027 21.0 0.1 0.0018 18.3 0.0 2.1 2 0 0 2 2 2 1 Ca2+ insensitive EF hand PHP_C PF13263.6 gi|73669127|ref|YP_305142.1| - 0.029 14.1 0.0 0.12 12.1 0.0 2.0 2 0 0 2 2 2 0 PHP-associated Seipin PF06775.14 gi|73669127|ref|YP_305142.1| - 0.1 12.7 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) Mrr_cat_2 PF13156.6 gi|73669128|ref|YP_305143.1| - 0.066 13.1 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Restriction endonuclease Longin_2 PF18639.1 gi|73669129|ref|YP_305144.1| - 0.11 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Yeast longin domain Aldedh PF00171.22 gi|73669130|ref|YP_305145.1| - 4.2e-139 464.0 0.0 4.7e-139 463.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|73669130|ref|YP_305145.1| - 0.15 11.1 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) Prefoldin_2 PF01920.20 gi|73669131|ref|YP_305146.1| - 0.00032 20.6 8.5 0.58 10.1 7.9 2.5 1 1 0 1 1 1 1 Prefoldin subunit Laminin_II PF06009.12 gi|73669131|ref|YP_305146.1| - 0.001 19.1 5.2 1.2 9.1 0.8 2.9 1 1 0 2 2 2 2 Laminin Domain II DUF4795 PF16043.5 gi|73669131|ref|YP_305146.1| - 0.0016 18.1 7.6 0.0023 17.6 7.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) Bacillus_HBL PF05791.11 gi|73669131|ref|YP_305146.1| - 0.0048 16.7 2.2 0.57 10.0 2.2 2.2 1 1 0 1 1 1 1 Bacillus haemolytic enterotoxin (HBL) NleF_casp_inhib PF16809.5 gi|73669131|ref|YP_305146.1| - 0.0051 16.7 4.7 0.049 13.5 1.6 2.1 1 1 1 2 2 2 1 NleF caspase inhibitor CorA PF01544.18 gi|73669131|ref|YP_305146.1| - 0.0088 15.4 7.8 0.02 14.2 1.2 2.4 1 1 0 2 2 2 1 CorA-like Mg2+ transporter protein SIKE PF05769.11 gi|73669131|ref|YP_305146.1| - 0.016 15.1 6.2 0.03 14.3 6.1 1.7 1 1 0 1 1 1 0 SIKE family HIP1_clath_bdg PF16515.5 gi|73669131|ref|YP_305146.1| - 0.018 15.6 8.6 0.055 14.1 2.2 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TolA_bind_tri PF16331.5 gi|73669131|ref|YP_305146.1| - 0.018 15.1 3.3 0.97 9.6 0.5 2.5 2 1 0 2 2 2 0 TolA binding protein trimerisation BLOC1_2 PF10046.9 gi|73669131|ref|YP_305146.1| - 0.02 15.2 6.1 0.3 11.4 1.6 2.2 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Baculo_PEP_C PF04513.12 gi|73669131|ref|YP_305146.1| - 0.02 14.9 0.8 0.4 10.7 0.8 2.1 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus TPR_MLP1_2 PF07926.12 gi|73669131|ref|YP_305146.1| - 0.024 14.7 6.7 0.18 11.9 1.0 2.2 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF3829 PF12889.7 gi|73669131|ref|YP_305146.1| - 0.027 14.0 2.7 0.12 11.9 0.2 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF3829) Spc7 PF08317.11 gi|73669131|ref|YP_305146.1| - 0.029 13.3 9.2 0.057 12.3 8.9 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein Snapin_Pallidin PF14712.6 gi|73669131|ref|YP_305146.1| - 0.033 14.6 5.1 0.14 12.6 1.7 2.2 1 1 1 2 2 2 0 Snapin/Pallidin 4HB_MCP_1 PF12729.7 gi|73669131|ref|YP_305146.1| - 0.043 13.3 4.7 0.07 12.7 4.7 1.4 1 1 0 1 1 1 0 Four helix bundle sensory module for signal transduction FlaC_arch PF05377.11 gi|73669131|ref|YP_305146.1| - 0.045 14.1 7.5 5.9 7.4 3.8 3.0 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Cytochrom_B562 PF07361.11 gi|73669131|ref|YP_305146.1| - 0.046 14.4 1.6 1.2 9.8 0.2 2.2 1 1 1 2 2 2 0 Cytochrome b562 LepB_GAP_N PF18172.1 gi|73669131|ref|YP_305146.1| - 0.047 13.6 0.1 0.086 12.7 0.0 1.6 1 1 0 1 1 1 0 LepB GAP domain N-terminal subdomain CLZ PF16526.5 gi|73669131|ref|YP_305146.1| - 0.05 14.0 7.3 0.6 10.5 1.5 2.7 1 1 2 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels LXG PF04740.12 gi|73669131|ref|YP_305146.1| - 0.061 13.0 2.8 1.2 8.8 0.3 2.1 1 1 1 2 2 2 0 LXG domain of WXG superfamily DUF948 PF06103.11 gi|73669131|ref|YP_305146.1| - 0.064 13.5 1.1 0.69 10.2 0.1 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Allexi_40kDa PF05549.11 gi|73669131|ref|YP_305146.1| - 0.073 12.6 1.3 0.095 12.2 1.3 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein Fib_alpha PF08702.10 gi|73669131|ref|YP_305146.1| - 0.074 13.2 4.4 0.72 10.0 0.5 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Syntaxin_2 PF14523.6 gi|73669131|ref|YP_305146.1| - 0.079 13.3 2.9 0.23 11.9 0.2 2.1 1 1 1 2 2 2 0 Syntaxin-like protein YabA PF06156.13 gi|73669131|ref|YP_305146.1| - 0.1 13.2 6.1 11 6.7 6.1 2.5 1 1 0 1 1 1 0 Initiation control protein YabA DUF5344 PF17279.2 gi|73669131|ref|YP_305146.1| - 0.1 13.2 1.6 0.39 11.3 0.2 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5344) KfrA_N PF11740.8 gi|73669131|ref|YP_305146.1| - 0.12 13.1 3.7 9.7 6.9 0.0 2.1 2 0 0 2 2 2 0 Plasmid replication region DNA-binding N-term SH3BP5 PF05276.14 gi|73669131|ref|YP_305146.1| - 0.12 12.2 3.9 0.95 9.2 3.9 2.3 1 1 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) DUF2730 PF10805.8 gi|73669131|ref|YP_305146.1| - 0.12 12.5 5.2 0.64 10.2 0.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Atg14 PF10186.9 gi|73669131|ref|YP_305146.1| - 0.14 11.2 4.6 0.2 10.7 4.6 1.3 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Com_YlbF PF06133.11 gi|73669131|ref|YP_305146.1| - 0.14 12.8 5.4 0.37 11.4 1.2 2.2 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA Sec34 PF04136.15 gi|73669131|ref|YP_305146.1| - 0.14 12.0 2.5 2.2 8.2 1.0 2.1 1 1 1 2 2 2 0 Sec34-like family ADIP PF11559.8 gi|73669131|ref|YP_305146.1| - 0.15 12.1 6.9 0.6 10.2 1.6 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF4407 PF14362.6 gi|73669131|ref|YP_305146.1| - 0.21 10.9 3.5 1.2 8.4 3.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FapA PF03961.13 gi|73669131|ref|YP_305146.1| - 0.26 9.8 6.5 0.13 10.9 1.8 1.8 1 1 1 2 2 2 0 Flagellar Assembly Protein A Spc24 PF08286.11 gi|73669131|ref|YP_305146.1| - 0.27 11.5 8.1 1.5 9.1 2.8 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 H-kinase_dim PF02895.14 gi|73669131|ref|YP_305146.1| - 0.28 11.6 4.5 6.2 7.3 2.2 3.1 1 1 1 2 2 2 0 Signal transducing histidine kinase, homodimeric domain DASH_Dad3 PF08656.10 gi|73669131|ref|YP_305146.1| - 0.29 11.3 5.6 4.3 7.5 5.6 2.5 1 1 0 1 1 1 0 DASH complex subunit Dad3 DUF2203 PF09969.9 gi|73669131|ref|YP_305146.1| - 0.29 11.8 3.7 3.8 8.2 0.3 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DLP_helical PF18709.1 gi|73669131|ref|YP_305146.1| - 0.55 9.4 5.4 0.75 8.9 0.6 2.0 1 1 1 2 2 2 0 Dynamin-like helical domain DASH_Dam1 PF08653.10 gi|73669131|ref|YP_305146.1| - 0.94 9.3 2.5 33 4.4 0.3 3.3 1 1 2 4 4 4 0 DASH complex subunit Dam1 LMBR1 PF04791.16 gi|73669131|ref|YP_305146.1| - 0.95 8.3 2.8 1.1 8.0 2.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Ax_dynein_light PF10211.9 gi|73669131|ref|YP_305146.1| - 1 9.2 8.6 3.1 7.7 1.8 2.1 1 1 1 2 2 2 0 Axonemal dynein light chain XhlA PF10779.9 gi|73669131|ref|YP_305146.1| - 1.6 9.0 7.7 1.7 8.9 0.5 2.8 1 1 2 3 3 3 0 Haemolysin XhlA bZIP_1 PF00170.21 gi|73669131|ref|YP_305146.1| - 2.1 8.5 9.4 1.2 9.3 1.0 3.2 1 1 2 3 3 3 0 bZIP transcription factor DivIC PF04977.15 gi|73669131|ref|YP_305146.1| - 2.2 8.1 7.1 2.1 8.2 1.9 2.4 1 1 0 2 2 2 0 Septum formation initiator Latarcin PF10279.9 gi|73669131|ref|YP_305146.1| - 3.6 8.1 10.5 1.8 9.0 2.9 2.4 1 1 1 2 2 2 0 Latarcin precursor APG6_N PF17675.1 gi|73669131|ref|YP_305146.1| - 7.4 7.1 13.1 7 7.2 3.0 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Mrr_cat PF04471.12 gi|73669132|ref|YP_305147.1| - 3.3e-31 107.7 0.1 4.3e-31 107.3 0.1 1.1 1 0 0 1 1 1 1 Restriction endonuclease Mrr_cat_2 PF13156.6 gi|73669132|ref|YP_305147.1| - 3e-07 30.4 0.1 4.1e-07 29.9 0.1 1.2 1 0 0 1 1 1 1 Restriction endonuclease FtsX PF02687.21 gi|73669133|ref|YP_305148.1| - 0.31 11.5 11.7 0.11 13.0 2.1 2.5 2 0 0 2 2 2 0 FtsX-like permease family ERGIC_N PF13850.6 gi|73669133|ref|YP_305148.1| - 2.8 8.3 7.3 1.2 9.5 0.3 3.4 2 1 1 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) NurA PF09376.10 gi|73669134|ref|YP_305149.1| - 0.00027 20.7 0.0 0.00049 19.9 0.0 1.6 1 1 0 1 1 1 1 NurA domain DUF2496 PF10689.9 gi|73669134|ref|YP_305149.1| - 0.021 14.6 0.0 0.046 13.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2496) DUF87 PF01935.17 gi|73669135|ref|YP_305150.1| - 1.5e-11 44.9 0.7 6.9e-11 42.7 0.0 2.2 2 0 0 2 2 2 1 Helicase HerA, central domain DUF853 PF05872.12 gi|73669135|ref|YP_305150.1| - 8.2e-08 31.3 0.0 0.00018 20.2 0.0 2.3 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_22 PF13401.6 gi|73669135|ref|YP_305150.1| - 1.1e-05 25.8 0.0 0.0016 18.7 0.0 2.7 3 0 0 3 3 3 1 AAA domain ResIII PF04851.15 gi|73669135|ref|YP_305150.1| - 1.6e-05 25.0 0.0 0.0049 16.9 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_10 PF12846.7 gi|73669135|ref|YP_305150.1| - 1.7e-05 23.9 0.0 0.021 13.7 0.0 2.3 2 0 0 2 2 2 2 AAA-like domain DEAD PF00270.29 gi|73669135|ref|YP_305150.1| - 0.00044 20.1 0.0 0.85 9.4 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase AAA PF00004.29 gi|73669135|ref|YP_305150.1| - 0.00059 20.3 0.0 0.91 10.0 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) TrwB_AAD_bind PF10412.9 gi|73669135|ref|YP_305150.1| - 0.0036 16.3 0.0 0.0085 15.0 0.0 1.5 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_7 PF12775.7 gi|73669135|ref|YP_305150.1| - 0.0062 16.1 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 gi|73669135|ref|YP_305150.1| - 0.0069 16.8 0.0 0.27 11.6 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain RNA_helicase PF00910.22 gi|73669135|ref|YP_305150.1| - 0.0089 16.4 0.0 0.022 15.1 0.0 1.7 1 0 0 1 1 1 1 RNA helicase FtsK_SpoIIIE PF01580.18 gi|73669135|ref|YP_305150.1| - 0.046 13.1 0.0 0.84 8.9 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family ABC_tran PF00005.27 gi|73669135|ref|YP_305150.1| - 0.063 13.8 0.0 0.16 12.5 0.0 1.7 1 0 0 1 1 1 0 ABC transporter HAS-barrel PF09378.10 gi|73669135|ref|YP_305150.1| - 0.086 13.0 0.1 0.67 10.1 0.0 2.3 2 0 0 2 2 2 0 HAS barrel domain AAA_33 PF13671.6 gi|73669135|ref|YP_305150.1| - 0.1 12.7 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Peptidase_S8 PF00082.22 gi|73669136|ref|YP_305151.1| - 4.9e-57 193.4 6.7 4.9e-57 193.4 6.7 2.0 2 0 0 2 2 2 1 Subtilase family PKD PF00801.20 gi|73669136|ref|YP_305151.1| - 1.5e-33 114.4 6.8 4.7e-18 64.8 0.4 2.6 2 0 0 2 2 2 2 PKD domain PKD_3 PF16820.5 gi|73669136|ref|YP_305151.1| - 0.00079 19.1 0.2 0.03 14.0 0.0 2.6 2 0 0 2 2 2 1 PKD-like domain Inhibitor_I9 PF05922.16 gi|73669136|ref|YP_305151.1| - 0.0015 19.2 0.2 0.0039 17.8 0.2 1.7 1 0 0 1 1 1 1 Peptidase inhibitor I9 MG2 PF01835.19 gi|73669136|ref|YP_305151.1| - 0.04 14.4 2.1 3.6 8.1 0.2 2.6 1 1 1 2 2 2 0 MG2 domain DUF5013 PF16405.5 gi|73669136|ref|YP_305151.1| - 0.17 12.1 3.2 14 5.9 0.2 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF5013) DUF3324 PF11797.8 gi|73669136|ref|YP_305151.1| - 0.34 10.9 5.7 4.1 7.4 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function C-terminal (DUF3324) DUF5011 PF16403.5 gi|73669136|ref|YP_305151.1| - 0.55 10.4 9.4 8.8 6.5 2.6 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF5011) PKD PF00801.20 gi|73669137|ref|YP_305152.1| - 3.7e-42 142.0 9.2 1.3e-13 50.5 0.4 3.8 3 0 0 3 3 3 3 PKD domain PD40 PF07676.12 gi|73669137|ref|YP_305152.1| - 1.7e-30 104.3 18.4 1.1e-09 37.9 0.6 7.5 7 0 0 7 7 7 5 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 gi|73669137|ref|YP_305152.1| - 6.4e-14 51.5 7.5 3e-05 22.9 0.5 5.7 3 2 1 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF5050 PF16472.5 gi|73669137|ref|YP_305152.1| - 3.5e-07 29.8 3.4 0.0023 17.3 0.1 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF5050) Pectate_lyase22 PF14583.6 gi|73669137|ref|YP_305152.1| - 4.8e-06 25.5 0.2 0.074 11.7 0.0 3.6 1 1 0 3 3 3 2 Oligogalacturonate lyase SGL PF08450.12 gi|73669137|ref|YP_305152.1| - 3.6e-05 23.5 3.1 0.11 12.1 0.0 3.6 2 1 1 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region MG2 PF01835.19 gi|73669137|ref|YP_305152.1| - 7.4e-05 23.1 1.7 0.41 11.1 0.1 3.4 1 1 1 3 3 3 2 MG2 domain PKD_3 PF16820.5 gi|73669137|ref|YP_305152.1| - 0.0012 18.5 0.9 6.3 6.6 0.0 4.3 4 0 0 4 4 4 1 PKD-like domain Gmad1 PF10647.9 gi|73669137|ref|YP_305152.1| - 0.0018 18.0 0.0 13 5.5 0.0 4.1 3 1 2 5 5 5 1 Lipoprotein LpqB beta-propeller domain DUF5513 PF17632.2 gi|73669137|ref|YP_305152.1| - 0.017 15.5 0.2 2.7 8.5 0.0 3.1 3 0 0 3 3 3 0 Family of unknown function (DUF5513) DUF3324 PF11797.8 gi|73669137|ref|YP_305152.1| - 0.31 11.0 2.2 5.4 7.0 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function C-terminal (DUF3324) Proteasome_A_N PF10584.9 gi|73669137|ref|YP_305152.1| - 2 8.2 9.9 44 3.9 0.0 4.8 5 0 0 5 5 5 0 Proteasome subunit A N-terminal signature Flavoprotein PF02441.19 gi|73669138|ref|YP_305153.1| - 1.8e-26 92.8 0.1 2.4e-26 92.4 0.1 1.1 1 0 0 1 1 1 1 Flavoprotein Phage_base_V PF04717.12 gi|73669139|ref|YP_305154.1| - 0.017 15.0 0.0 0.057 13.3 0.0 1.8 2 0 0 2 2 2 0 Type VI secretion system, phage-baseplate injector DUF5460 PF17544.2 gi|73669139|ref|YP_305154.1| - 0.078 12.0 0.0 0.092 11.7 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5460) HD PF01966.22 gi|73669140|ref|YP_305155.1| - 1.4e-14 54.4 2.0 1.6e-13 50.9 0.5 2.6 2 0 0 2 2 2 1 HD domain HDOD PF08668.12 gi|73669140|ref|YP_305155.1| - 0.02 14.4 0.0 0.24 10.8 0.0 2.3 2 0 0 2 2 2 0 HDOD domain LPD1 PF18796.1 gi|73669140|ref|YP_305155.1| - 0.049 13.7 0.0 0.52 10.5 0.0 2.3 2 0 0 2 2 2 0 Large polyvalent protein-associated domain 1 MerR PF00376.23 gi|73669140|ref|YP_305155.1| - 0.059 13.2 0.0 3.3 7.5 0.0 2.7 2 0 0 2 2 2 0 MerR family regulatory protein UPF0052 PF01933.18 gi|73669141|ref|YP_305156.1| - 5.6e-49 167.0 0.0 6.6e-49 166.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 FmdE PF02663.14 gi|73669142|ref|YP_305157.1| - 6.3e-08 32.7 0.0 2e-07 31.1 0.0 1.8 2 1 0 2 2 2 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Pribosyltran PF00156.27 gi|73669143|ref|YP_305158.1| - 9.1e-20 70.8 0.5 1.1e-19 70.5 0.5 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|73669143|ref|YP_305158.1| - 2.3e-05 23.9 0.1 3.7e-05 23.3 0.1 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|73669143|ref|YP_305158.1| - 0.0015 18.1 0.1 0.0023 17.5 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase Diphthamide_syn PF01866.17 gi|73669144|ref|YP_305159.1| - 4e-83 279.3 0.0 5e-83 279.0 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein MTS PF05175.14 gi|73669145|ref|YP_305160.1| - 1.1e-13 51.1 0.0 1.4e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|73669145|ref|YP_305160.1| - 1.2e-13 51.2 0.2 1.6e-13 50.8 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|73669145|ref|YP_305160.1| - 3.2e-09 36.8 0.0 4.6e-09 36.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73669145|ref|YP_305160.1| - 1.6e-08 35.1 0.0 2.8e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|73669145|ref|YP_305160.1| - 2.4e-08 33.9 0.4 2.3e-07 30.7 0.4 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 gi|73669145|ref|YP_305160.1| - 4.1e-06 27.3 0.0 8.1e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73669145|ref|YP_305160.1| - 0.0015 18.4 0.0 0.0017 18.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|73669145|ref|YP_305160.1| - 0.0038 17.2 0.0 0.0046 17.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|73669145|ref|YP_305160.1| - 0.019 14.6 0.0 0.026 14.1 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 PCMT PF01135.19 gi|73669145|ref|YP_305160.1| - 0.044 13.5 0.0 0.06 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.7 gi|73669145|ref|YP_305160.1| - 0.054 13.4 0.1 0.08 12.9 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase domain FmrO PF07091.11 gi|73669145|ref|YP_305160.1| - 0.14 11.7 0.0 0.26 10.8 0.0 1.3 1 1 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) AviRa PF11599.8 gi|73669145|ref|YP_305160.1| - 0.16 11.4 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 RRNA methyltransferase AviRa ECR1_N PF14382.6 gi|73669146|ref|YP_305161.1| - 3.4e-11 42.7 1.1 6.2e-11 41.9 1.1 1.5 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.9 gi|73669146|ref|YP_305161.1| - 3.1e-06 27.8 3.9 1.2e-05 25.9 0.5 2.8 2 1 1 3 3 3 1 Exosome component EXOSC1/CSL4 HypA PF01155.19 gi|73669146|ref|YP_305161.1| - 0.024 14.7 0.1 0.042 13.9 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA S1 PF00575.23 gi|73669146|ref|YP_305161.1| - 0.14 12.5 4.4 0.14 12.5 0.8 2.5 2 0 0 2 2 2 0 S1 RNA binding domain zf-LITAF-like PF10601.9 gi|73669146|ref|YP_305161.1| - 0.16 12.2 0.5 21 5.5 0.1 2.4 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain RNA_pol_L_2 PF13656.6 gi|73669147|ref|YP_305162.1| - 1.6e-20 72.7 0.1 1.9e-20 72.4 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|73669147|ref|YP_305162.1| - 2.3e-06 26.9 0.0 5.6e-06 25.7 0.0 1.6 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain SepSecS PF05889.13 gi|73669148|ref|YP_305163.1| - 9.7e-55 185.8 0.0 2.9e-54 184.3 0.0 1.7 1 1 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_5 PF00266.19 gi|73669148|ref|YP_305163.1| - 6.3e-15 55.0 0.0 8.9e-15 54.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|73669148|ref|YP_305163.1| - 4.6e-10 39.2 0.0 5.8e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II OKR_DC_1 PF01276.20 gi|73669148|ref|YP_305163.1| - 0.006 15.4 0.0 0.028 13.2 0.0 1.8 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Pyridoxal_deC PF00282.19 gi|73669148|ref|YP_305163.1| - 0.013 14.2 0.0 0.022 13.5 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain Rib PF08428.10 gi|73669148|ref|YP_305163.1| - 0.023 14.7 0.1 0.07 13.1 0.1 1.8 2 0 0 2 2 2 0 Rib/alpha-like repeat DegT_DnrJ_EryC1 PF01041.17 gi|73669148|ref|YP_305163.1| - 0.15 11.3 0.0 0.23 10.7 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family HTH_20 PF12840.7 gi|73669149|ref|YP_305164.1| - 0.00011 22.1 0.0 0.00018 21.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|73669149|ref|YP_305164.1| - 0.0014 18.8 0.0 0.0023 18.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|73669149|ref|YP_305164.1| - 0.0048 16.8 0.1 0.0077 16.2 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_5 PF01022.20 gi|73669149|ref|YP_305164.1| - 0.013 15.4 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|73669149|ref|YP_305164.1| - 0.068 13.1 0.0 0.13 12.2 0.0 1.5 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Skp1 PF01466.19 gi|73669149|ref|YP_305164.1| - 1.1 9.5 0.1 1.1 9.5 0.1 2.5 3 0 0 3 3 3 0 Skp1 family, dimerisation domain motB PF17613.2 gi|73669150|ref|YP_305165.1| - 0.12 12.2 0.2 1.5 8.7 0.1 2.0 1 1 1 2 2 2 0 Modifier of transcription Orn_Arg_deC_N PF02784.16 gi|73669151|ref|YP_305166.1| - 6.2e-30 104.4 0.0 8.2e-30 104.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|73669151|ref|YP_305166.1| - 2.9e-20 72.3 0.0 3e-20 72.3 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain mTERF PF02536.14 gi|73669151|ref|YP_305166.1| - 0.22 10.4 0.1 0.34 9.8 0.1 1.2 1 0 0 1 1 1 0 mTERF DNA_pol_B_thumb PF14791.6 gi|73669152|ref|YP_305167.1| - 3.9e-22 78.2 0.0 1.1e-21 76.8 0.0 1.8 1 0 0 1 1 1 1 DNA polymerase beta thumb HHH_8 PF14716.6 gi|73669152|ref|YP_305167.1| - 1.3e-20 73.6 6.9 3.9e-20 72.0 1.0 3.5 2 1 1 3 3 3 1 Helix-hairpin-helix domain PHP PF02811.19 gi|73669152|ref|YP_305167.1| - 1.4e-11 45.0 0.1 6e-11 42.9 0.1 2.0 1 1 0 1 1 1 1 PHP domain HHH_5 PF14520.6 gi|73669152|ref|YP_305167.1| - 2.9e-11 43.8 7.8 2e-07 31.5 0.8 3.7 3 0 0 3 3 3 2 Helix-hairpin-helix domain HHH_3 PF12836.7 gi|73669152|ref|YP_305167.1| - 5.2e-05 23.4 2.0 0.01 16.1 0.2 3.5 2 1 0 2 2 2 1 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|73669152|ref|YP_305167.1| - 0.0012 19.0 2.2 0.016 15.3 0.0 3.4 3 1 0 4 4 4 1 Helix-hairpin-helix motif DNA_pol_B_palm PF14792.6 gi|73669152|ref|YP_305167.1| - 0.0014 18.8 0.0 0.0037 17.4 0.0 1.7 1 0 0 1 1 1 1 DNA polymerase beta palm DUF3701 PF12482.8 gi|73669152|ref|YP_305167.1| - 0.0019 18.3 0.0 0.53 10.4 0.0 2.6 1 1 0 2 2 2 1 Phage integrase protein HHH PF00633.23 gi|73669152|ref|YP_305167.1| - 0.0022 17.8 0.7 0.043 13.7 0.0 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif RNase_P_p30 PF01876.16 gi|73669152|ref|YP_305167.1| - 0.0033 16.9 0.1 0.008 15.7 0.1 1.7 1 1 0 1 1 1 1 RNase P subunit p30 DNA_pol_lambd_f PF10391.9 gi|73669152|ref|YP_305167.1| - 0.0057 16.5 0.1 0.16 11.8 0.0 2.9 3 0 0 3 3 3 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|73669152|ref|YP_305167.1| - 0.03 14.5 0.1 3 8.2 0.0 2.6 1 1 1 2 2 2 0 Pathogenicity locus IMS_HHH PF11798.8 gi|73669152|ref|YP_305167.1| - 0.055 13.8 0.6 6.3 7.3 0.0 3.3 3 0 0 3 3 3 0 IMS family HHH motif HRDC PF00570.23 gi|73669152|ref|YP_305167.1| - 0.067 13.2 0.3 1.3 9.0 0.1 2.7 3 0 0 3 3 3 0 HRDC domain DNA_ligase_A_M PF01068.21 gi|73669153|ref|YP_305168.1| - 5.7e-55 186.1 1.5 8.1e-55 185.6 1.5 1.2 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|73669153|ref|YP_305168.1| - 1.4e-30 106.9 0.4 8.4e-30 104.3 0.1 2.4 3 0 0 3 3 3 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|73669153|ref|YP_305168.1| - 4.2e-22 78.6 0.0 9.7e-22 77.4 0.0 1.7 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|73669153|ref|YP_305168.1| - 3e-08 34.1 1.0 5.6e-08 33.3 1.0 1.4 1 0 0 1 1 1 1 RNA ligase DNA_ligase_OB_2 PF14743.6 gi|73669153|ref|YP_305168.1| - 5.3e-06 26.4 0.2 0.0054 16.7 0.0 2.6 2 0 0 2 2 2 2 DNA ligase OB-like domain AAA_assoc_C PF09821.9 gi|73669153|ref|YP_305168.1| - 0.025 15.1 0.2 10 6.7 0.0 2.6 2 0 0 2 2 2 0 C-terminal AAA-associated domain DNA_ligase_A_N PF04675.14 gi|73669154|ref|YP_305169.1| - 0.076 13.3 0.3 0.078 13.3 0.3 1.0 1 0 0 1 1 1 0 DNA ligase N terminus 4HBT PF03061.22 gi|73669155|ref|YP_305170.1| - 1.3e-09 38.3 0.0 1.6e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|73669155|ref|YP_305170.1| - 2.6e-06 27.6 0.1 3.6e-06 27.1 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) Phage_T4_gp36 PF03903.13 gi|73669157|ref|YP_305172.1| - 0.083 12.9 2.9 0.089 12.8 2.9 1.1 1 0 0 1 1 1 0 Phage T4 tail fibre Rhodanese PF00581.20 gi|73669158|ref|YP_305173.1| - 9.6e-20 71.1 0.0 1.2e-19 70.8 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF2769 PF10967.8 gi|73669159|ref|YP_305174.1| - 1.1e-06 29.1 13.5 1.7e-05 25.4 13.8 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF2769) Na_H_Exchanger PF00999.21 gi|73669160|ref|YP_305175.1| - 5.3e-64 216.4 51.6 7.6e-64 215.9 51.6 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|73669160|ref|YP_305175.1| - 4.4e-23 81.8 0.4 6.7e-23 81.2 0.4 1.3 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|73669160|ref|YP_305175.1| - 1e-12 47.7 0.0 5.7e-12 45.3 0.0 2.4 2 0 0 2 2 2 1 TrkA-C domain AdoHcyase_NAD PF00670.21 gi|73669160|ref|YP_305175.1| - 0.15 12.1 0.5 1.6 8.8 0.1 2.2 1 1 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LYTB PF02401.18 gi|73669160|ref|YP_305175.1| - 0.15 11.3 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 LytB protein Mur_ligase PF01225.25 gi|73669160|ref|YP_305175.1| - 0.18 12.1 0.5 1.9 8.9 0.1 2.5 2 0 0 2 2 2 0 Mur ligase family, catalytic domain Maf PF02545.14 gi|73669161|ref|YP_305176.1| - 1.6e-52 177.7 0.0 1.8e-52 177.6 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein DUF674 PF05056.12 gi|73669161|ref|YP_305176.1| - 0.13 11.2 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) tRNA-synt_1e PF01406.19 gi|73669162|ref|YP_305177.1| - 1.1e-104 350.0 0.0 1.5e-104 349.5 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DALR_2 PF09190.11 gi|73669162|ref|YP_305177.1| - 3.3e-14 53.1 0.0 7.4e-14 52.0 0.0 1.6 1 0 0 1 1 1 1 DALR domain tRNA-synt_1g PF09334.11 gi|73669162|ref|YP_305177.1| - 5.1e-13 48.5 0.1 2.6e-05 23.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 gi|73669162|ref|YP_305177.1| - 1.1e-10 41.0 0.0 0.00013 21.0 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 gi|73669162|ref|YP_305177.1| - 4e-09 35.3 0.0 2e-07 29.6 0.0 2.5 2 0 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1c PF00749.21 gi|73669162|ref|YP_305177.1| - 0.014 14.3 0.0 0.041 12.8 0.0 1.8 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1d PF00750.19 gi|73669162|ref|YP_305177.1| - 0.05 12.5 0.9 0.14 11.0 0.0 2.2 2 1 1 3 3 3 0 tRNA synthetases class I (R) Y1_Tnp PF01797.16 gi|73669164|ref|YP_305179.1| - 2.4e-35 121.2 3.8 2.8e-35 121.0 3.8 1.0 1 0 0 1 1 1 1 Transposase IS200 like HTH_OrfB_IS605 PF12323.8 gi|73669165|ref|YP_305180.1| - 1.2e-21 76.0 0.4 1.3e-21 75.8 0.4 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_int_SAM_4 PF13495.6 gi|73669165|ref|YP_305180.1| - 0.086 13.3 0.0 0.1 13.1 0.0 1.2 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain OrfB_IS605 PF01385.19 gi|73669166|ref|YP_305181.1| - 3.1e-28 98.4 1.7 5.3e-28 97.7 1.7 1.3 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73669166|ref|YP_305181.1| - 5.2e-23 80.7 0.2 9.8e-23 79.9 0.2 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zf-piccolo PF05715.13 gi|73669166|ref|YP_305181.1| - 0.00089 19.4 0.6 0.0024 18.0 0.6 1.7 1 0 0 1 1 1 1 Piccolo Zn-finger DZR PF12773.7 gi|73669166|ref|YP_305181.1| - 0.08 13.0 0.3 0.14 12.2 0.3 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-RanBP PF00641.18 gi|73669166|ref|YP_305181.1| - 0.76 9.2 6.3 5.8 6.3 0.1 2.6 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Ima1_N PF09779.9 gi|73669166|ref|YP_305181.1| - 0.91 10.4 3.7 0.66 10.8 0.2 2.2 2 0 0 2 2 2 0 Ima1 N-terminal domain Lon_C PF05362.13 gi|73669167|ref|YP_305182.1| - 7e-13 48.6 3.1 7.9e-13 48.4 1.5 1.8 1 1 1 2 2 2 1 Lon protease (S16) C-terminal proteolytic domain HAP1_N PF04849.13 gi|73669167|ref|YP_305182.1| - 0.019 14.2 2.0 0.029 13.6 2.0 1.2 1 0 0 1 1 1 0 HAP1 N-terminal conserved region HemX PF04375.14 gi|73669167|ref|YP_305182.1| - 0.02 14.2 0.1 0.027 13.8 0.1 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase ChlI PF13541.6 gi|73669167|ref|YP_305182.1| - 0.041 13.7 0.0 0.063 13.1 0.0 1.4 1 0 0 1 1 1 0 Subunit ChlI of Mg-chelatase Sec2p PF06428.11 gi|73669167|ref|YP_305182.1| - 0.048 13.6 1.3 0.14 12.2 1.3 1.7 1 0 0 1 1 1 0 GDP/GTP exchange factor Sec2p CBM_26 PF16824.5 gi|73669167|ref|YP_305182.1| - 0.059 13.5 0.1 0.78 9.9 0.0 2.3 2 0 0 2 2 2 0 C-terminal carbohydrate-binding module YlqD PF11068.8 gi|73669167|ref|YP_305182.1| - 0.13 12.6 1.1 0.21 12.0 1.1 1.3 1 0 0 1 1 1 0 YlqD protein DUF1447 PF07288.11 gi|73669167|ref|YP_305182.1| - 0.19 11.8 3.9 0.13 12.3 1.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1447) Snapin_Pallidin PF14712.6 gi|73669167|ref|YP_305182.1| - 0.29 11.6 1.9 1.3 9.5 0.8 2.2 2 0 0 2 2 2 0 Snapin/Pallidin bZIP_2 PF07716.15 gi|73669167|ref|YP_305182.1| - 0.42 10.7 2.6 1 9.5 2.6 1.7 1 0 0 1 1 1 0 Basic region leucine zipper Mto2_bdg PF12808.7 gi|73669167|ref|YP_305182.1| - 0.71 10.2 2.4 1.1 9.6 1.4 1.8 1 1 1 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region Acetyltransf_10 PF13673.7 gi|73669168|ref|YP_305183.1| - 2.2e-15 56.7 0.0 2.8e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73669168|ref|YP_305183.1| - 3e-09 37.2 0.1 4.3e-09 36.7 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73669168|ref|YP_305183.1| - 1.5e-08 34.9 0.1 2e-08 34.4 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 gi|73669168|ref|YP_305183.1| - 0.00012 22.2 0.1 0.00016 21.8 0.1 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73669168|ref|YP_305183.1| - 0.0083 16.2 0.0 0.016 15.4 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 gi|73669168|ref|YP_305183.1| - 0.041 13.8 0.1 0.091 12.7 0.1 1.6 1 1 0 1 1 1 0 FR47-like protein DUF1485 PF07364.12 gi|73669169|ref|YP_305184.1| - 1.3e-68 231.4 0.0 1.8e-68 230.9 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M81 MlrC_C PF07171.12 gi|73669169|ref|YP_305184.1| - 2.9e-51 174.2 0.1 4.7e-51 173.5 0.1 1.4 1 0 0 1 1 1 1 MlrC C-terminus LAB_N PF07578.11 gi|73669169|ref|YP_305184.1| - 0.14 12.2 0.0 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain Amidohydro_1 PF01979.20 gi|73669170|ref|YP_305185.1| - 2.5e-35 122.4 0.0 3.4e-35 122.0 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|73669170|ref|YP_305185.1| - 5.1e-11 42.7 0.7 2.7e-06 27.1 0.0 2.2 1 1 1 2 2 2 2 Amidohydrolase family ThrE PF06738.12 gi|73669171|ref|YP_305186.1| - 1.4e-43 149.0 29.5 4.2e-40 137.6 8.0 2.0 2 0 0 2 2 2 2 Putative threonine/serine exporter ThrE_2 PF12821.7 gi|73669171|ref|YP_305186.1| - 1.4e-13 51.1 37.2 1e-07 32.1 14.0 2.3 2 0 0 2 2 2 2 Threonine/Serine exporter, ThrE DUF3481 PF11980.8 gi|73669171|ref|YP_305186.1| - 1 9.1 4.3 1.6 8.5 0.1 2.9 2 1 1 3 3 3 0 C-terminal domain of neuropilin glycoprotein Amidohydro_1 PF01979.20 gi|73669172|ref|YP_305187.1| - 7.9e-33 114.2 0.0 1e-32 113.8 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|73669172|ref|YP_305187.1| - 1.6e-09 37.8 0.1 0.0015 18.0 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family Metallophos PF00149.28 gi|73669173|ref|YP_305188.1| - 6.7e-07 30.0 0.5 9.6e-07 29.5 0.5 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|73669173|ref|YP_305188.1| - 7.9e-06 26.2 0.0 1.2e-05 25.6 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DNA_pol_E_B PF04042.16 gi|73669173|ref|YP_305188.1| - 0.042 13.2 0.0 0.17 11.2 0.0 1.8 1 1 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B Metallophos_3 PF14582.6 gi|73669173|ref|YP_305188.1| - 0.091 12.1 0.0 0.26 10.6 0.0 1.6 1 1 1 2 2 2 0 Metallophosphoesterase, calcineurin superfamily PAS_3 PF08447.12 gi|73669175|ref|YP_305190.1| - 1.1e-53 179.4 0.1 3.1e-17 62.6 0.1 4.9 4 0 0 4 4 4 4 PAS fold PocR PF10114.9 gi|73669175|ref|YP_305190.1| - 1.8e-47 161.1 0.0 6.2e-47 159.4 0.0 2.0 1 0 0 1 1 1 1 Sensory domain found in PocR HisKA_2 PF07568.12 gi|73669175|ref|YP_305190.1| - 1.9e-33 114.3 1.6 1.9e-33 114.3 1.6 3.1 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.7 gi|73669175|ref|YP_305190.1| - 6.7e-32 109.9 0.4 4.7e-15 55.7 0.1 4.9 4 0 0 4 4 4 4 PAS domain PAS PF00989.25 gi|73669175|ref|YP_305190.1| - 6.8e-20 71.2 0.0 1.9e-09 37.5 0.0 5.1 5 0 0 5 5 5 4 PAS fold PAS_4 PF08448.10 gi|73669175|ref|YP_305190.1| - 1.5e-18 67.1 0.0 2.8e-09 37.2 0.0 4.0 4 0 0 4 4 4 3 PAS fold HATPase_c PF02518.26 gi|73669175|ref|YP_305190.1| - 3.3e-10 40.5 0.2 1.3e-09 38.5 0.2 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|73669175|ref|YP_305190.1| - 1.2e-09 37.9 0.0 0.01 15.8 0.0 4.1 4 0 0 4 4 4 2 PAS domain HATPase_c_2 PF13581.6 gi|73669175|ref|YP_305190.1| - 1.7e-05 24.7 0.0 4.3e-05 23.5 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|73669175|ref|YP_305190.1| - 0.0019 18.9 0.1 0.0019 18.9 0.1 3.9 5 0 0 5 5 4 1 HWE histidine kinase Lipase PF00151.19 gi|73669175|ref|YP_305190.1| - 0.0064 15.8 0.0 0.013 14.8 0.0 1.4 1 0 0 1 1 1 1 Lipase MEKHLA PF08670.11 gi|73669175|ref|YP_305190.1| - 0.0076 16.2 0.0 0.41 10.6 0.0 2.5 1 1 1 2 2 2 1 MEKHLA domain OmpH PF03938.14 gi|73669175|ref|YP_305190.1| - 0.021 15.2 0.5 0.021 15.2 0.5 4.2 4 1 0 4 4 3 0 Outer membrane protein (OmpH-like) LprI PF07007.12 gi|73669175|ref|YP_305190.1| - 0.11 13.2 2.5 2.1 9.1 1.3 3.1 3 0 0 3 3 3 0 Lysozyme inhibitor LprI PAS_10 PF13596.6 gi|73669175|ref|YP_305190.1| - 0.12 13.0 0.0 0.58 10.8 0.0 2.3 1 1 0 1 1 1 0 PAS domain RapH_N PF18801.1 gi|73669175|ref|YP_305190.1| - 0.26 11.4 3.7 18 5.5 0.2 3.0 2 0 0 2 2 2 0 response regulator aspartate phosphatase H, N terminal SPOB_a PF14689.6 gi|73669175|ref|YP_305190.1| - 0.32 10.7 3.4 0.68 9.7 0.0 3.2 4 0 0 4 4 4 0 Sensor_kinase_SpoOB-type, alpha-helical domain Fzo_mitofusin PF04799.13 gi|73669175|ref|YP_305190.1| - 0.83 9.2 5.7 0.88 9.1 1.0 2.7 2 0 0 2 2 2 0 fzo-like conserved region tRNA-synt_2 PF00152.20 gi|73669176|ref|YP_305191.1| - 5.9e-86 288.4 0.3 7.5e-86 288.1 0.3 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|73669176|ref|YP_305191.1| - 1.8e-14 53.4 0.1 3.6e-14 52.5 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|73669176|ref|YP_305191.1| - 6.2e-08 32.4 0.2 0.00047 19.7 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) DUF4179 PF13786.6 gi|73669177|ref|YP_305192.1| - 0.00011 22.5 0.0 0.00022 21.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4179) PEARLI-4 PF05278.12 gi|73669177|ref|YP_305192.1| - 0.015 15.0 1.4 0.019 14.6 1.4 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) FAM176 PF14851.6 gi|73669177|ref|YP_305192.1| - 0.016 14.9 0.1 0.021 14.5 0.1 1.2 1 0 0 1 1 1 0 FAM176 family O-antigen_lig PF13425.6 gi|73669177|ref|YP_305192.1| - 0.017 14.0 0.4 0.016 14.0 0.4 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein SID-1_RNA_chan PF13965.6 gi|73669177|ref|YP_305192.1| - 0.13 10.7 0.3 0.17 10.3 0.3 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DEAD_assoc PF08494.11 gi|73669178|ref|YP_305193.1| - 2.6e-33 115.4 0.0 5.8e-33 114.3 0.0 1.6 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|73669178|ref|YP_305193.1| - 4.1e-31 108.1 0.0 1.3e-30 106.5 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|73669178|ref|YP_305193.1| - 1.5e-22 80.0 0.5 2.3e-19 69.7 0.0 3.3 3 0 0 3 3 3 2 Helicase conserved C-terminal domain ResIII PF04851.15 gi|73669178|ref|YP_305193.1| - 2.8e-09 37.2 0.0 5.6e-09 36.2 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|73669178|ref|YP_305193.1| - 0.014 15.7 0.1 0.1 12.9 0.1 2.5 1 1 0 1 1 1 0 AAA domain T4SS-DNA_transf PF02534.14 gi|73669178|ref|YP_305193.1| - 0.023 13.5 0.0 0.048 12.4 0.0 1.4 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer Zn-ribbon_8 PF09723.10 gi|73669178|ref|YP_305193.1| - 0.075 13.2 0.4 0.17 12.0 0.4 1.5 1 0 0 1 1 1 0 Zinc ribbon domain FAT PF02259.23 gi|73669178|ref|YP_305193.1| - 0.17 11.1 0.0 0.29 10.3 0.0 1.3 1 0 0 1 1 1 0 FAT domain CBM_11 PF03425.13 gi|73669179|ref|YP_305194.1| - 2.2e-08 34.2 1.8 3.3e-08 33.6 1.8 1.3 1 0 0 1 1 1 1 Carbohydrate binding domain (family 11) Endotoxin_C PF03944.14 gi|73669179|ref|YP_305194.1| - 0.018 15.3 0.0 0.052 13.9 0.0 1.7 1 0 0 1 1 1 0 delta endotoxin ABC_tran PF00005.27 gi|73669181|ref|YP_305196.1| - 1.3e-16 61.3 0.0 2.3e-16 60.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669181|ref|YP_305196.1| - 4.1e-12 46.5 0.3 9.8e-06 25.6 0.2 2.5 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|73669181|ref|YP_305196.1| - 6.3e-05 22.8 0.1 0.00034 20.4 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73669181|ref|YP_305196.1| - 8.2e-05 23.1 0.0 0.00013 22.4 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|73669181|ref|YP_305196.1| - 0.00023 20.7 0.4 0.005 16.3 0.4 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|73669181|ref|YP_305196.1| - 0.00023 21.4 0.2 0.002 18.4 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73669181|ref|YP_305196.1| - 0.0032 17.2 0.0 0.0072 16.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|73669181|ref|YP_305196.1| - 0.0042 16.8 0.5 0.13 12.0 0.0 2.7 2 1 1 3 3 3 1 AAA ATPase domain AAA_23 PF13476.6 gi|73669181|ref|YP_305196.1| - 0.0066 17.0 2.6 0.067 13.7 2.6 2.1 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|73669181|ref|YP_305196.1| - 0.0072 16.3 0.3 3.7 7.6 0.0 2.5 1 1 1 2 2 2 2 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 gi|73669181|ref|YP_305196.1| - 0.013 15.4 0.1 0.031 14.2 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_14 PF13173.6 gi|73669181|ref|YP_305196.1| - 0.026 14.6 0.1 0.25 11.4 0.0 2.3 2 1 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 gi|73669181|ref|YP_305196.1| - 0.038 12.8 0.2 0.58 8.9 0.0 2.5 2 1 0 3 3 3 0 Predicted ATPase of the ABC class NACHT PF05729.12 gi|73669181|ref|YP_305196.1| - 0.053 13.4 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain cobW PF02492.19 gi|73669181|ref|YP_305196.1| - 0.055 13.1 0.0 0.16 11.5 0.0 1.8 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Adeno_IVa2 PF02456.15 gi|73669181|ref|YP_305196.1| - 0.058 12.2 0.0 0.1 11.4 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_19 PF13245.6 gi|73669181|ref|YP_305196.1| - 0.077 13.3 0.7 0.92 9.8 0.7 2.3 1 1 0 1 1 1 0 AAA domain PhoH PF02562.16 gi|73669181|ref|YP_305196.1| - 0.079 12.4 0.1 0.2 11.1 0.0 1.8 2 0 0 2 2 2 0 PhoH-like protein DUF1513 PF07433.11 gi|73669181|ref|YP_305196.1| - 0.084 11.9 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1513) AAA_25 PF13481.6 gi|73669181|ref|YP_305196.1| - 0.13 11.9 0.1 0.38 10.3 0.1 1.5 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 gi|73669182|ref|YP_305197.1| - 5e-13 49.0 0.0 7.3e-13 48.5 0.0 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|73669182|ref|YP_305197.1| - 7.7e-05 21.8 0.2 0.08 11.9 0.0 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 gi|73669182|ref|YP_305197.1| - 0.00012 22.0 0.0 0.00021 21.2 0.0 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.6 gi|73669182|ref|YP_305197.1| - 0.0055 17.1 0.0 0.0068 16.8 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain NTPase_1 PF03266.15 gi|73669182|ref|YP_305197.1| - 0.0067 16.3 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 NTPase KTI12 PF08433.10 gi|73669182|ref|YP_305197.1| - 0.013 15.0 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 SRP54 PF00448.22 gi|73669182|ref|YP_305197.1| - 0.026 14.2 0.0 0.058 13.0 0.0 1.7 1 1 1 2 2 2 0 SRP54-type protein, GTPase domain ATP_bind_1 PF03029.17 gi|73669182|ref|YP_305197.1| - 0.032 14.0 0.0 0.17 11.6 0.0 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Ploopntkinase3 PF18751.1 gi|73669182|ref|YP_305197.1| - 0.036 14.0 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 RecA PF00154.21 gi|73669182|ref|YP_305197.1| - 0.043 13.3 0.1 0.11 11.9 0.0 1.7 2 0 0 2 2 2 0 recA bacterial DNA recombination protein Fer2_BFD PF04324.15 gi|73669182|ref|YP_305197.1| - 0.047 14.0 0.2 3.7 8.0 0.0 3.0 3 0 0 3 3 3 0 BFD-like [2Fe-2S] binding domain ATPase_2 PF01637.18 gi|73669182|ref|YP_305197.1| - 0.062 13.2 0.0 0.082 12.8 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea SBP_bac_6 PF13343.6 gi|73669183|ref|YP_305198.1| - 3.3e-53 180.6 0.1 4.9e-53 180.1 0.1 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF1858 PF08984.11 gi|73669183|ref|YP_305198.1| - 7.9e-11 42.0 0.1 1.6e-10 41.0 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1858) MIT PF04212.18 gi|73669184|ref|YP_305199.1| - 0.05 13.7 0.1 0.13 12.3 0.1 1.7 1 1 0 1 1 1 0 MIT (microtubule interacting and transport) domain Fib_alpha PF08702.10 gi|73669184|ref|YP_305199.1| - 0.12 12.5 0.4 0.2 11.8 0.4 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family NTP_transf_2 PF01909.23 gi|73669185|ref|YP_305200.1| - 0.00013 22.2 0.0 0.00013 22.2 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|73669185|ref|YP_305200.1| - 0.00013 21.9 0.0 0.00014 21.9 0.0 1.0 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase Inhibitor_I42 PF09394.10 gi|73669186|ref|YP_305201.1| - 5.4e-23 81.2 0.1 6.9e-23 80.9 0.1 1.1 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 DUF3267 PF11667.8 gi|73669187|ref|YP_305202.1| - 4.8e-19 68.6 6.9 4.8e-19 68.6 6.9 1.6 2 0 0 2 2 2 1 Putative zincin peptidase DUF1232 PF06803.12 gi|73669188|ref|YP_305203.1| - 6.9e-12 44.9 12.7 1.1e-11 44.4 12.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) Filamin PF00630.19 gi|73669189|ref|YP_305204.1| - 0.086 13.7 0.0 0.11 13.3 0.0 1.2 1 0 0 1 1 1 0 Filamin/ABP280 repeat ADH_zinc_N_2 PF13602.6 gi|73669190|ref|YP_305205.1| - 9.5e-30 104.4 0.0 1.8e-29 103.5 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 gi|73669190|ref|YP_305205.1| - 7.1e-18 64.8 0.0 1.3e-17 64.0 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|73669190|ref|YP_305205.1| - 7e-10 38.8 0.1 5.4e-08 32.7 0.0 2.3 1 1 1 2 2 2 2 Alcohol dehydrogenase GroES-like domain DUF2855 PF11017.8 gi|73669190|ref|YP_305205.1| - 0.018 14.8 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) ADH_N_2 PF16884.5 gi|73669190|ref|YP_305205.1| - 0.063 13.2 0.2 0.17 11.8 0.0 1.8 2 0 0 2 2 2 0 N-terminal domain of oxidoreductase NosD PF05048.13 gi|73669191|ref|YP_305206.1| - 5.7e-121 402.3 165.5 2e-47 161.5 44.3 6.0 2 2 2 5 5 5 5 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73669191|ref|YP_305206.1| - 3.5e-56 189.4 139.5 1.3e-18 67.3 29.9 5.4 2 1 3 6 6 6 5 Right handed beta helix region Pectinesterase PF01095.19 gi|73669191|ref|YP_305206.1| - 0.00043 19.1 3.3 0.19 10.4 0.0 3.2 3 0 0 3 3 3 2 Pectinesterase Pectate_lyase_3 PF12708.7 gi|73669191|ref|YP_305206.1| - 0.53 10.1 80.1 0.3 10.9 7.6 6.5 2 2 5 7 7 7 0 Pectate lyase superfamily protein Acetyltransf_4 PF13420.7 gi|73669192|ref|YP_305207.1| - 2.3e-18 66.8 0.0 2.7e-18 66.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73669192|ref|YP_305207.1| - 4.2e-15 56.0 0.0 5.2e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|73669192|ref|YP_305207.1| - 2.2e-11 43.8 0.0 2.7e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|73669192|ref|YP_305207.1| - 1.6e-09 38.6 0.0 2.5e-09 37.9 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73669192|ref|YP_305207.1| - 2.2e-09 37.6 0.0 3.3e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_16 PF05301.11 gi|73669192|ref|YP_305207.1| - 0.016 14.9 0.0 0.06 13.1 0.0 1.8 2 0 0 2 2 2 0 GNAT acetyltransferase, Mec-17 Acetyltransf_9 PF13527.7 gi|73669192|ref|YP_305207.1| - 0.029 14.4 0.0 0.085 12.9 0.0 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73669192|ref|YP_305207.1| - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein TaqI_C PF12950.7 gi|73669193|ref|YP_305208.1| - 1.3e-05 25.3 0.0 2.5e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain DUF3579 PF12112.8 gi|73669193|ref|YP_305208.1| - 0.14 12.8 0.0 3.3 8.3 0.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3579) HisKA_7TM PF16927.5 gi|73669194|ref|YP_305209.1| - 3.6e-49 167.8 30.7 4.6e-49 167.4 30.7 1.1 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HATPase_c PF02518.26 gi|73669194|ref|YP_305209.1| - 1.4e-13 51.3 0.2 3.7e-13 50.0 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|73669194|ref|YP_305209.1| - 3.2e-09 36.8 0.0 7.7e-09 35.5 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|73669194|ref|YP_305209.1| - 7.7e-08 32.5 0.0 3.4e-07 30.5 0.0 2.2 2 0 0 2 2 2 1 PAS domain PAS_8 PF13188.7 gi|73669194|ref|YP_305209.1| - 2.4e-07 30.6 0.0 5.7e-07 29.4 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|73669194|ref|YP_305209.1| - 8.7e-07 29.2 0.0 1.5e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 PAS fold SPOB_a PF14689.6 gi|73669194|ref|YP_305209.1| - 0.00032 20.3 1.2 0.00076 19.1 0.4 2.1 2 1 0 2 2 2 1 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_2 PF13581.6 gi|73669194|ref|YP_305209.1| - 0.0017 18.3 0.0 0.0032 17.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain DUF3418 PF11898.8 gi|73669194|ref|YP_305209.1| - 0.016 13.9 0.0 0.022 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) HATPase_c_3 PF13589.6 gi|73669194|ref|YP_305209.1| - 0.12 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase URO-D PF01208.17 gi|73669195|ref|YP_305210.1| - 3.8e-83 279.5 0.0 4.2e-83 279.4 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Cupin_2 PF07883.11 gi|73669196|ref|YP_305211.1| - 2.8e-10 39.7 0.1 6.6e-10 38.6 0.1 1.5 1 0 0 1 1 1 1 Cupin domain ARD PF03079.14 gi|73669196|ref|YP_305211.1| - 5.9e-05 23.3 3.3 0.00039 20.6 3.3 2.1 1 1 0 1 1 1 1 ARD/ARD' family Cupin_3 PF05899.12 gi|73669196|ref|YP_305211.1| - 0.00015 21.4 0.5 0.00041 20.0 0.2 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 gi|73669196|ref|YP_305211.1| - 0.0012 18.7 0.2 0.018 14.9 0.0 2.4 3 0 0 3 3 3 1 AraC-like ligand binding domain Cupin_1 PF00190.22 gi|73669196|ref|YP_305211.1| - 0.0015 18.2 0.0 0.0025 17.5 0.0 1.3 1 0 0 1 1 1 1 Cupin EutQ PF06249.12 gi|73669196|ref|YP_305211.1| - 0.0044 16.8 0.0 0.007 16.1 0.0 1.4 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ CENP-C_C PF11699.8 gi|73669196|ref|YP_305211.1| - 0.02 15.1 0.0 0.035 14.3 0.0 1.3 1 0 0 1 1 1 0 Mif2/CENP-C like GPI PF06560.11 gi|73669196|ref|YP_305211.1| - 0.11 11.8 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) Cupin_6 PF12852.7 gi|73669196|ref|YP_305211.1| - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Cupin UPF0029 PF01205.19 gi|73669197|ref|YP_305212.1| - 5.3e-25 87.8 0.0 1.8e-24 86.1 0.0 1.8 2 0 0 2 2 2 1 Uncharacterized protein family UPF0029 DUF1949 PF09186.11 gi|73669197|ref|YP_305212.1| - 8.6e-11 41.6 0.2 1.4e-10 40.9 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1949) DUF4969 PF16339.5 gi|73669198|ref|YP_305213.1| - 0.013 15.8 0.1 0.013 15.8 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4969) PA26 PF04636.13 gi|73669198|ref|YP_305213.1| - 0.07 12.1 1.6 0.076 11.9 1.6 1.0 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) BUD22 PF09073.10 gi|73669198|ref|YP_305213.1| - 4.2 6.6 12.0 4.4 6.5 12.0 1.0 1 0 0 1 1 1 0 BUD22 UbiA PF01040.18 gi|73669199|ref|YP_305214.1| - 8.8e-31 107.1 10.1 1.1e-30 106.7 10.1 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Amidinotransf PF02274.17 gi|73669200|ref|YP_305215.1| - 2.6e-37 128.7 0.0 4.9e-36 124.5 0.0 2.0 1 1 0 1 1 1 1 Amidinotransferase HNHc_6 PF16784.5 gi|73669200|ref|YP_305215.1| - 0.00087 18.9 0.1 0.0024 17.4 0.1 1.7 1 1 1 2 2 2 1 Putative HNHc nuclease Methyltransf_33 PF10017.9 gi|73669201|ref|YP_305216.1| - 4.6e-26 91.7 0.0 5.7e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 Histidine-specific methyltransferase, SAM-dependent PUB_1 PF18486.1 gi|73669201|ref|YP_305216.1| - 0.12 12.2 0.1 3.8 7.4 0.0 2.4 2 0 0 2 2 2 0 PNGase/UBA- or UBX-containing domain SPASM PF13186.6 gi|73669202|ref|YP_305217.1| - 4.5e-08 33.5 0.9 1.7e-07 31.7 0.1 2.2 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain Radical_SAM PF04055.21 gi|73669202|ref|YP_305217.1| - 1.4e-06 28.8 0.0 2.9e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73669202|ref|YP_305217.1| - 0.0091 16.3 0.7 0.067 13.5 0.0 2.5 3 0 0 3 3 3 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|73669203|ref|YP_305218.1| - 0.034 14.5 0.1 0.037 14.4 0.1 1.2 1 0 0 1 1 1 0 Radical SAM superfamily Insulin_TMD PF17870.1 gi|73669204|ref|YP_305219.1| - 0.082 13.0 0.9 0.15 12.2 0.9 1.4 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Baculo_11_kDa PF06143.11 gi|73669204|ref|YP_305219.1| - 0.16 11.6 0.2 0.25 11.0 0.2 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family Radical_SAM PF04055.21 gi|73669205|ref|YP_305220.1| - 1.7e-08 35.0 0.0 2.7e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily DUF3388 PF11868.8 gi|73669205|ref|YP_305220.1| - 0.0044 16.4 0.1 0.0068 15.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3388) DUF1848 PF08902.11 gi|73669205|ref|YP_305220.1| - 0.017 14.9 2.1 0.045 13.5 0.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1848) Disaggr_assoc PF08480.10 gi|73669206|ref|YP_305221.1| - 2e-80 269.2 13.5 2e-80 269.2 13.5 3.1 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|73669206|ref|YP_305221.1| - 6.3e-16 58.6 49.5 2.4e-14 53.5 14.3 4.1 1 1 3 4 4 4 3 Right handed beta helix region DUF5123 PF17161.4 gi|73669206|ref|YP_305221.1| - 0.0013 19.8 21.0 0.0034 18.4 7.2 4.4 2 2 1 3 3 3 2 Domain of unknown function (DUF5123) DUF4957 PF16318.5 gi|73669206|ref|YP_305221.1| - 2.6 8.0 9.3 0.099 12.6 0.5 3.1 3 1 0 4 4 4 0 Domain of unknown function (DUF4957) Hexapep PF00132.24 gi|73669206|ref|YP_305221.1| - 6.1 6.7 9.6 44 4.0 0.1 4.4 4 0 0 4 4 4 0 Bacterial transferase hexapeptide (six repeats) CMD PF02627.20 gi|73669207|ref|YP_305222.1| - 0.0011 18.9 0.0 0.0015 18.5 0.0 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Acetyltransf_1 PF00583.25 gi|73669208|ref|YP_305223.1| - 9e-17 61.4 0.1 1.4e-16 60.8 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73669208|ref|YP_305223.1| - 2.1e-12 47.3 0.2 3.3e-12 46.7 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73669208|ref|YP_305223.1| - 1.9e-11 44.0 0.1 2.9e-11 43.4 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73669208|ref|YP_305223.1| - 4.1e-10 39.5 0.1 6.4e-10 38.9 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|73669208|ref|YP_305223.1| - 1.3e-08 35.1 0.9 1.6e-08 34.9 0.9 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73669208|ref|YP_305223.1| - 2e-08 34.4 0.0 2.6e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|73669208|ref|YP_305223.1| - 2.6e-05 24.9 0.0 3.2e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|73669208|ref|YP_305223.1| - 0.0027 17.4 0.0 0.0036 17.0 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|73669208|ref|YP_305223.1| - 0.003 17.0 3.9 0.0058 16.1 3.8 1.4 1 1 0 1 1 1 1 Putative acetyl-transferase DUF2833 PF11090.8 gi|73669208|ref|YP_305223.1| - 0.0096 16.3 0.9 0.025 14.9 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2833) Nudix_hydro PF18290.1 gi|73669208|ref|YP_305223.1| - 0.018 15.1 0.1 0.044 13.8 0.0 1.7 2 0 0 2 2 2 0 Nudix hydrolase domain GNAT_acetyltran PF12746.7 gi|73669208|ref|YP_305223.1| - 0.026 14.1 0.0 0.049 13.2 0.0 1.3 1 1 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_CG PF14542.6 gi|73669208|ref|YP_305223.1| - 0.12 12.5 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Methyltransf_25 PF13649.6 gi|73669210|ref|YP_305225.1| - 2.4e-16 60.2 0.0 3.8e-16 59.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669210|ref|YP_305225.1| - 2.1e-15 57.1 0.0 3.3e-15 56.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669210|ref|YP_305225.1| - 2.5e-15 56.6 0.0 3e-15 56.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73669210|ref|YP_305225.1| - 1.2e-13 51.7 0.0 1.7e-13 51.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|73669210|ref|YP_305225.1| - 1.2e-12 47.8 0.5 1.9e-12 47.0 0.0 1.6 2 1 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|73669210|ref|YP_305225.1| - 1.2e-09 38.2 0.0 1.7e-09 37.7 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73669210|ref|YP_305225.1| - 2.7e-08 33.5 0.0 3.7e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|73669210|ref|YP_305225.1| - 2.6e-05 24.1 0.0 4.6e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 gi|73669210|ref|YP_305225.1| - 3.2e-05 23.5 0.0 4.6e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) NodS PF05401.11 gi|73669210|ref|YP_305225.1| - 4e-05 23.3 0.0 6.3e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|73669210|ref|YP_305225.1| - 8.7e-05 22.1 0.0 0.00018 21.1 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 gi|73669210|ref|YP_305225.1| - 0.00027 20.4 0.0 0.00075 19.0 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase TehB PF03848.14 gi|73669210|ref|YP_305225.1| - 0.00093 18.6 0.0 0.0013 18.1 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_18 PF12847.7 gi|73669210|ref|YP_305225.1| - 0.0011 19.0 0.1 0.002 18.0 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain TPMT PF05724.11 gi|73669210|ref|YP_305225.1| - 0.0056 16.4 0.0 0.0076 15.9 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Pox_MCEL PF03291.16 gi|73669210|ref|YP_305225.1| - 0.023 13.8 0.0 0.038 13.1 0.0 1.3 1 0 0 1 1 1 0 mRNA capping enzyme DREV PF05219.12 gi|73669210|ref|YP_305225.1| - 0.027 13.6 0.0 0.033 13.3 0.0 1.1 1 0 0 1 1 1 0 DREV methyltransferase tRNA_U5-meth_tr PF05958.11 gi|73669210|ref|YP_305225.1| - 0.037 13.0 0.0 0.05 12.6 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_32 PF13679.6 gi|73669210|ref|YP_305225.1| - 0.18 11.8 0.0 0.27 11.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain SBF PF01758.16 gi|73669211|ref|YP_305226.1| - 1.3e-66 224.0 12.7 1.3e-66 224.0 12.7 2.3 3 0 0 3 3 3 1 Sodium Bile acid symporter family HTH_5 PF01022.20 gi|73669212|ref|YP_305227.1| - 2.6e-16 59.2 0.3 3.8e-16 58.7 0.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73669212|ref|YP_305227.1| - 9.7e-11 41.6 0.0 1.4e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|73669212|ref|YP_305227.1| - 0.00027 20.8 0.0 0.00042 20.1 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|73669212|ref|YP_305227.1| - 0.0003 20.6 0.0 0.00045 20.0 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|73669212|ref|YP_305227.1| - 0.00085 18.8 1.5 0.0026 17.3 1.5 1.8 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding Cdc6_C PF09079.11 gi|73669212|ref|YP_305227.1| - 0.0052 16.7 0.0 0.0089 16.0 0.0 1.4 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain MarR PF01047.22 gi|73669212|ref|YP_305227.1| - 0.0087 16.0 0.1 0.014 15.4 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|73669212|ref|YP_305227.1| - 0.0089 16.2 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|73669212|ref|YP_305227.1| - 0.012 15.6 0.2 0.055 13.4 0.0 2.0 1 1 1 2 2 2 0 Crp-like helix-turn-helix domain PaaX PF07848.12 gi|73669212|ref|YP_305227.1| - 0.063 13.5 0.0 0.088 13.0 0.0 1.4 1 0 0 1 1 1 0 PaaX-like protein HTH_CodY PF08222.11 gi|73669212|ref|YP_305227.1| - 0.077 12.6 0.0 0.15 11.6 0.0 1.6 1 0 0 1 1 1 0 CodY helix-turn-helix domain TFIIE_alpha PF02002.17 gi|73669212|ref|YP_305227.1| - 0.078 12.9 0.3 0.1 12.5 0.3 1.3 1 1 0 1 1 1 0 TFIIE alpha subunit Usp PF00582.26 gi|73669213|ref|YP_305228.1| - 3.2e-27 95.8 0.0 4e-27 95.4 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family HTH_5 PF01022.20 gi|73669214|ref|YP_305229.1| - 1.6e-13 50.3 0.2 3.4e-13 49.2 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73669214|ref|YP_305229.1| - 0.00024 21.1 0.0 0.00036 20.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DUF3024 PF11225.8 gi|73669214|ref|YP_305229.1| - 0.019 15.2 0.1 0.04 14.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3024) HTH_5 PF01022.20 gi|73669215|ref|YP_305230.1| - 9.5e-11 41.4 0.1 8e-08 32.0 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73669215|ref|YP_305230.1| - 1.6e-10 40.8 0.0 4.2e-10 39.5 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain Cdc6_C PF09079.11 gi|73669215|ref|YP_305230.1| - 0.0017 18.3 0.0 0.003 17.5 0.0 1.5 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain HTH_34 PF13601.6 gi|73669215|ref|YP_305230.1| - 0.004 17.3 0.0 0.0071 16.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_CodY PF08222.11 gi|73669215|ref|YP_305230.1| - 0.0047 16.4 0.0 0.0083 15.7 0.0 1.4 1 0 0 1 1 1 1 CodY helix-turn-helix domain TrmB PF01978.19 gi|73669215|ref|YP_305230.1| - 0.0061 16.4 0.0 0.027 14.4 0.0 2.0 2 1 1 3 3 3 1 Sugar-specific transcriptional regulator TrmB ArsP_1 PF03773.13 gi|73669216|ref|YP_305231.1| - 1.1e-69 234.8 23.4 1.3e-69 234.6 23.4 1.0 1 0 0 1 1 1 1 Predicted permease Thioredoxin_3 PF13192.6 gi|73669217|ref|YP_305232.1| - 2.8e-28 97.8 4.0 4.1e-28 97.2 4.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|73669217|ref|YP_305232.1| - 9.1e-06 25.8 1.2 2.3e-05 24.5 1.2 1.8 1 1 0 1 1 1 1 Glutaredoxin ArsD PF06953.11 gi|73669217|ref|YP_305232.1| - 0.0039 17.5 0.8 0.0085 16.4 0.2 1.8 1 1 1 2 2 2 1 Arsenical resistance operon trans-acting repressor ArsD Thioredoxin_4 PF13462.6 gi|73669217|ref|YP_305232.1| - 0.009 16.2 1.3 2.9 8.0 0.5 2.3 1 1 1 2 2 2 2 Thioredoxin DUF953 PF06110.11 gi|73669217|ref|YP_305232.1| - 0.01 15.5 0.1 0.014 15.0 0.1 1.3 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) BAT PF15915.5 gi|73669217|ref|YP_305232.1| - 0.016 15.1 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 GAF and HTH_10 associated domain DUF836 PF05768.14 gi|73669217|ref|YP_305232.1| - 0.017 15.5 0.4 0.024 15.0 0.3 1.4 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) FtsK_alpha PF17854.1 gi|73669217|ref|YP_305232.1| - 0.025 14.7 3.6 0.074 13.2 3.6 1.8 1 1 0 1 1 1 0 FtsK alpha domain DUF1611 PF07755.11 gi|73669217|ref|YP_305232.1| - 0.033 13.5 0.3 0.038 13.3 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain Thioredoxin PF00085.20 gi|73669217|ref|YP_305232.1| - 0.042 13.8 0.7 0.048 13.6 0.7 1.2 1 0 0 1 1 1 0 Thioredoxin PHD_Oberon PF07227.11 gi|73669217|ref|YP_305232.1| - 0.064 13.1 0.3 0.079 12.8 0.3 1.2 1 0 0 1 1 1 0 PHD - plant homeodomain finger protein DGC PF08859.11 gi|73669218|ref|YP_305233.1| - 5.3e-34 116.5 0.3 6.4e-34 116.2 0.3 1.1 1 0 0 1 1 1 1 DGC domain MtrA PF04208.14 gi|73669220|ref|YP_305235.1| - 1.8e-43 148.1 0.0 2.5e-43 147.7 0.0 1.2 1 1 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A ZZ PF00569.17 gi|73669220|ref|YP_305235.1| - 0.074 12.9 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 Zinc finger, ZZ type Methyltransf_31 PF13847.6 gi|73669221|ref|YP_305236.1| - 4e-38 130.6 0.0 6.2e-38 130.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73669221|ref|YP_305236.1| - 9.8e-24 83.9 0.0 2.1e-23 82.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669221|ref|YP_305236.1| - 1.1e-21 77.3 0.0 2.7e-21 76.0 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73669221|ref|YP_305236.1| - 1e-18 67.6 0.0 1.6e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|73669221|ref|YP_305236.1| - 7.1e-12 45.5 0.0 9.5e-12 45.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|73669221|ref|YP_305236.1| - 1.3e-11 44.7 0.0 1.7e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|73669221|ref|YP_305236.1| - 4.4e-11 43.4 0.0 9.2e-11 42.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|73669221|ref|YP_305236.1| - 1.4e-07 31.2 0.1 2e-07 30.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.18 gi|73669221|ref|YP_305236.1| - 1.7e-07 31.2 0.0 2.8e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|73669221|ref|YP_305236.1| - 2e-07 30.7 0.0 4.3e-07 29.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.15 gi|73669221|ref|YP_305236.1| - 1.1e-05 25.4 0.3 3.6e-05 23.7 0.3 1.8 1 1 0 1 1 1 1 Hypothetical methyltransferase CMAS PF02353.20 gi|73669221|ref|YP_305236.1| - 2e-05 24.0 0.0 2.9e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 gi|73669221|ref|YP_305236.1| - 3.5e-05 23.9 0.0 5.3e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|73669221|ref|YP_305236.1| - 0.00044 20.2 0.0 0.0007 19.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|73669221|ref|YP_305236.1| - 0.00079 18.9 0.0 0.003 17.1 0.0 1.8 1 1 1 2 2 2 1 Putative methyltransferase Methyltransf_15 PF09445.10 gi|73669221|ref|YP_305236.1| - 0.0012 18.5 0.1 0.0017 17.9 0.1 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase FtsJ PF01728.19 gi|73669221|ref|YP_305236.1| - 0.0013 18.9 0.0 0.0017 18.5 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase DOT1 PF08123.13 gi|73669221|ref|YP_305236.1| - 0.0049 16.4 0.1 0.007 15.9 0.1 1.3 1 0 0 1 1 1 1 Histone methylation protein DOT1 Fibrillarin PF01269.17 gi|73669221|ref|YP_305236.1| - 0.031 13.4 0.0 1.6 7.8 0.0 2.1 1 1 1 2 2 2 0 Fibrillarin Methyltransf_3 PF01596.17 gi|73669221|ref|YP_305236.1| - 0.076 12.2 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Methyltr_RsmB-F PF01189.17 gi|73669221|ref|YP_305236.1| - 0.11 12.2 0.0 0.27 10.8 0.0 1.7 1 1 1 2 2 2 0 16S rRNA methyltransferase RsmB/F GidB PF02527.15 gi|73669221|ref|YP_305236.1| - 0.13 11.6 0.1 0.29 10.4 0.1 1.5 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G N6_N4_Mtase PF01555.18 gi|73669221|ref|YP_305236.1| - 0.14 11.9 0.0 3.7 7.2 0.0 2.1 2 0 0 2 2 2 0 DNA methylase DsbD PF02683.15 gi|73669222|ref|YP_305237.1| - 3.4e-33 115.3 26.4 1.5e-32 113.2 26.4 1.8 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|73669222|ref|YP_305237.1| - 1.1e-13 51.6 20.4 1.4e-13 51.2 20.4 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region MerE PF05052.12 gi|73669222|ref|YP_305237.1| - 1.6 8.7 5.8 1.5 8.8 0.5 2.5 2 1 0 2 2 2 0 MerE protein Thioredoxin PF00085.20 gi|73669223|ref|YP_305238.1| - 0.0002 21.3 0.0 0.00033 20.6 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin Thioredoxin_6 PF13848.6 gi|73669223|ref|YP_305238.1| - 0.0033 17.4 0.0 0.0047 16.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain T4_deiodinase PF00837.17 gi|73669223|ref|YP_305238.1| - 0.096 12.0 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Iodothyronine deiodinase Pox_G9-A16 PF03003.16 gi|73669224|ref|YP_305239.1| - 0.014 15.1 0.5 0.015 15.0 0.5 1.2 1 0 0 1 1 1 0 Pox virus entry-fusion-complex G9/A16 CMD PF02627.20 gi|73669225|ref|YP_305240.1| - 0.0098 15.9 0.0 0.011 15.7 0.0 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Apo-VLDL-II PF05418.11 gi|73669225|ref|YP_305240.1| - 0.027 15.0 0.2 0.035 14.7 0.2 1.3 1 1 0 1 1 1 0 Apovitellenin I (Apo-VLDL-II) NOG1_N PF17835.1 gi|73669225|ref|YP_305240.1| - 0.058 13.4 0.0 0.063 13.2 0.0 1.1 1 0 0 1 1 1 0 NOG1 N-terminal helical domain HTH_5 PF01022.20 gi|73669226|ref|YP_305241.1| - 5e-13 48.7 0.2 1.8e-12 46.9 0.2 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73669226|ref|YP_305241.1| - 0.00019 21.4 0.0 0.00028 20.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DUF3024 PF11225.8 gi|73669226|ref|YP_305241.1| - 0.019 15.2 0.1 0.04 14.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3024) CMD PF02627.20 gi|73669227|ref|YP_305242.1| - 4.4e-22 77.9 0.1 5.5e-22 77.6 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family PA26 PF04636.13 gi|73669227|ref|YP_305242.1| - 0.092 11.6 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) FlhD PF05247.13 gi|73669227|ref|YP_305242.1| - 0.12 12.7 0.1 0.16 12.3 0.1 1.2 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) FeS PF04060.13 gi|73669228|ref|YP_305243.1| - 1.8e-14 53.1 1.4 3.6e-14 52.1 1.4 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster HTH_20 PF12840.7 gi|73669228|ref|YP_305243.1| - 7.3e-06 25.9 0.0 2e-05 24.5 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain TBP PF00352.21 gi|73669228|ref|YP_305243.1| - 8.2e-05 22.5 0.1 0.00022 21.1 0.0 1.7 2 0 0 2 2 2 1 Transcription factor TFIID (or TATA-binding protein, TBP) HTH_5 PF01022.20 gi|73669228|ref|YP_305243.1| - 0.00054 19.8 0.0 0.0014 18.4 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Fer4 PF00037.27 gi|73669229|ref|YP_305244.1| - 9 6.3 8.2 2 8.4 0.2 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain HTH_5 PF01022.20 gi|73669230|ref|YP_305245.1| - 1.7e-05 24.6 0.0 4.4e-05 23.3 0.0 1.8 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73669230|ref|YP_305245.1| - 4.6e-05 23.4 0.0 7e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DrsE PF02635.15 gi|73669232|ref|YP_305247.1| - 6.9e-21 74.8 0.0 7.9e-21 74.6 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE PF02635.15 gi|73669233|ref|YP_305248.1| - 1.8e-09 38.0 0.0 2.1e-09 37.8 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DsrH PF04077.12 gi|73669234|ref|YP_305249.1| - 1.9e-11 43.9 0.0 2.7e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 DsrH like protein HTH_20 PF12840.7 gi|73669236|ref|YP_305251.1| - 7.5e-10 38.7 0.0 1.9e-09 37.5 0.0 1.6 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|73669236|ref|YP_305251.1| - 1.1e-08 34.7 0.1 1e-05 25.3 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family Cdc6_C PF09079.11 gi|73669236|ref|YP_305251.1| - 0.0028 17.6 0.0 0.0049 16.8 0.0 1.4 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain HTH_34 PF13601.6 gi|73669236|ref|YP_305251.1| - 0.0077 16.4 0.0 0.015 15.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_CodY PF08222.11 gi|73669236|ref|YP_305251.1| - 0.028 14.0 0.0 0.046 13.3 0.0 1.4 1 0 0 1 1 1 0 CodY helix-turn-helix domain Polysacc_deac_1 PF01522.21 gi|73669237|ref|YP_305252.1| - 5.7e-25 87.6 0.0 8.2e-25 87.1 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|73669237|ref|YP_305252.1| - 4.1e-05 23.3 0.1 0.0003 20.5 0.1 2.1 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) DUF2194 PF09960.9 gi|73669237|ref|YP_305252.1| - 0.014 13.8 0.0 0.018 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2194) DUF3473 PF11959.8 gi|73669237|ref|YP_305252.1| - 0.021 14.8 0.1 0.049 13.6 0.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3473) WHIM1 PF15612.6 gi|73669237|ref|YP_305252.1| - 0.055 13.0 0.1 0.13 11.9 0.1 1.7 1 0 0 1 1 1 0 WSTF, HB1, Itc1p, MBD9 motif 1 Glycos_transf_1 PF00534.20 gi|73669238|ref|YP_305253.1| - 9.5e-40 135.9 0.3 6.5e-39 133.2 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73669238|ref|YP_305253.1| - 5.3e-27 94.9 0.1 4.3e-26 91.9 0.0 2.2 2 1 0 3 3 3 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73669238|ref|YP_305253.1| - 1.6e-25 90.1 0.0 3.7e-25 88.9 0.0 1.6 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|73669238|ref|YP_305253.1| - 5.1e-17 62.8 0.0 7.7e-17 62.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|73669238|ref|YP_305253.1| - 9.8e-14 51.6 0.0 2.1e-13 50.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|73669238|ref|YP_305253.1| - 7.9e-06 26.2 0.0 1.5e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 gi|73669238|ref|YP_305253.1| - 0.0007 19.4 0.0 0.0019 18.0 0.0 1.6 1 1 0 1 1 1 1 Starch synthase catalytic domain PIGA PF08288.12 gi|73669238|ref|YP_305253.1| - 0.0046 17.5 0.0 0.011 16.4 0.0 1.6 1 0 0 1 1 1 1 PIGA (GPI anchor biosynthesis) LPG_synthase_TM PF03706.13 gi|73669239|ref|YP_305254.1| - 6.1e-41 140.9 24.9 6.9e-41 140.7 24.9 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region RVT_1 PF00078.27 gi|73669240|ref|YP_305255.1| - 8e-44 149.8 1.1 2.2e-43 148.4 0.0 2.1 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_N PF13655.6 gi|73669240|ref|YP_305255.1| - 6.1e-32 109.7 6.6 1.3e-31 108.7 6.6 1.6 1 0 0 1 1 1 1 N-terminal domain of reverse transcriptase GIIM PF08388.11 gi|73669240|ref|YP_305255.1| - 2.2e-25 88.5 5.6 2.2e-25 88.5 5.6 2.5 3 0 0 3 3 3 1 Group II intron, maturase-specific domain Cupredoxin_1 PF13473.6 gi|73669241|ref|YP_305256.1| - 2.7e-32 110.9 3.5 1.7e-22 79.5 0.2 2.2 2 0 0 2 2 2 2 Cupredoxin-like domain Copper-bind PF00127.20 gi|73669241|ref|YP_305256.1| - 1e-05 25.9 7.1 0.06 13.8 0.3 4.4 1 1 2 3 3 3 2 Copper binding proteins, plastocyanin/azurin family Y_Y_Y PF07495.13 gi|73669241|ref|YP_305256.1| - 0.001 18.9 0.5 2.3 8.2 0.0 2.8 2 0 0 2 2 2 2 Y_Y_Y domain DUF4330 PF14221.6 gi|73669241|ref|YP_305256.1| - 0.094 12.9 1.9 1.8 8.7 0.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4330) DUF5640 PF18692.1 gi|73669241|ref|YP_305256.1| - 0.15 12.1 5.5 5.6 7.1 0.1 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5640) DUF1724 PF08350.10 gi|73669242|ref|YP_305257.1| - 2.8e-21 75.4 0.1 8.2e-21 73.9 0.1 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) NifU_N PF01592.16 gi|73669243|ref|YP_305258.1| - 6.3e-43 146.0 0.0 1.1e-42 145.3 0.0 1.3 1 0 0 1 1 1 1 NifU-like N terminal domain FeS_assembly_P PF01883.19 gi|73669243|ref|YP_305258.1| - 7.2e-12 45.3 1.2 1.4e-11 44.3 0.4 1.9 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein E2F_TDP PF02319.20 gi|73669243|ref|YP_305258.1| - 0.036 14.1 0.0 0.074 13.1 0.0 1.7 1 1 0 1 1 1 0 E2F/DP family winged-helix DNA-binding domain TSCPD PF12637.7 gi|73669243|ref|YP_305258.1| - 0.12 12.6 0.1 0.25 11.6 0.1 1.5 1 0 0 1 1 1 0 TSCPD domain Aminotran_5 PF00266.19 gi|73669244|ref|YP_305259.1| - 4.1e-62 210.3 0.1 6.4e-62 209.6 0.1 1.3 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|73669244|ref|YP_305259.1| - 1.4e-07 31.1 0.1 2.7e-07 30.2 0.1 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|73669244|ref|YP_305259.1| - 7.4e-05 22.2 0.0 9.8e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|73669244|ref|YP_305259.1| - 0.00073 18.8 0.0 0.00087 18.6 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|73669244|ref|YP_305259.1| - 0.0033 16.0 0.5 0.0049 15.5 0.1 1.4 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme CbiK PF06180.11 gi|73669244|ref|YP_305259.1| - 0.042 13.2 0.0 0.089 12.1 0.0 1.5 1 0 0 1 1 1 0 Cobalt chelatase (CbiK) Pyridoxal_deC PF00282.19 gi|73669244|ref|YP_305259.1| - 0.052 12.3 0.0 0.19 10.4 0.0 1.8 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain SepSecS PF05889.13 gi|73669244|ref|YP_305259.1| - 0.085 11.5 0.0 0.13 10.9 0.0 1.3 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Transketolase_C PF02780.20 gi|73669244|ref|YP_305259.1| - 0.09 12.7 0.1 0.2 11.5 0.1 1.6 1 0 0 1 1 1 0 Transketolase, C-terminal domain DrsE_2 PF13686.6 gi|73669245|ref|YP_305260.1| - 4.7e-38 130.5 2.8 8.1e-22 77.8 0.2 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|73669245|ref|YP_305260.1| - 9.6e-08 32.4 0.0 1.3e-07 32.0 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family TusA PF01206.17 gi|73669246|ref|YP_305261.1| - 1.2e-21 76.3 0.2 1.3e-21 76.1 0.2 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA HIT PF01230.23 gi|73669247|ref|YP_305262.1| - 2.4e-30 105.1 0.0 3.3e-30 104.7 0.0 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|73669247|ref|YP_305262.1| - 1.2e-14 54.7 0.0 1.6e-14 54.3 0.0 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|73669247|ref|YP_305262.1| - 0.015 15.2 0.0 0.023 14.5 0.0 1.3 1 1 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 DUF5518 PF17647.1 gi|73669248|ref|YP_305263.1| - 6.2e-10 39.3 32.2 7.5e-10 39.0 32.2 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5518) DUF4277 PF14104.6 gi|73669249|ref|YP_305264.1| - 3.2e-38 130.4 0.0 6.2e-38 129.5 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|73669249|ref|YP_305264.1| - 1.4e-14 54.3 3.6 5.9e-14 52.2 3.6 1.9 1 1 0 1 1 1 1 Transposase DDE domain CARDB PF07705.11 gi|73669250|ref|YP_305265.1| - 8.1e-90 295.8 41.6 2.6e-23 82.2 2.0 6.5 6 0 0 6 6 6 6 CARDB ASH PF15780.5 gi|73669250|ref|YP_305265.1| - 6.4e-07 29.5 19.9 0.0027 17.9 0.4 6.0 6 0 0 6 6 6 3 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF11 PF01345.18 gi|73669250|ref|YP_305265.1| - 5.1e-06 26.7 12.7 0.015 15.6 0.2 6.3 5 3 1 6 6 6 2 Domain of unknown function DUF11 Sec23_BS PF08033.12 gi|73669250|ref|YP_305265.1| - 0.0011 19.7 2.0 26 5.6 0.0 5.0 4 2 0 4 4 4 0 Sec23/Sec24 beta-sandwich domain Flg_hook PF02120.16 gi|73669250|ref|YP_305265.1| - 0.0088 15.9 0.7 21 5.1 0.0 4.0 4 0 0 4 4 4 0 Flagellar hook-length control protein FliK Lysyl_oxidase PF01186.17 gi|73669250|ref|YP_305265.1| - 0.061 13.0 0.3 7.2 6.2 0.0 3.2 3 0 0 3 3 3 0 Lysyl oxidase AGS_C PF18134.1 gi|73669250|ref|YP_305265.1| - 1 9.3 13.2 8 6.5 0.1 5.5 2 1 3 5 5 5 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain DUF1573 PF07610.11 gi|73669250|ref|YP_305265.1| - 1.2 9.2 31.2 0.18 11.9 0.5 7.1 5 2 2 7 7 7 0 Protein of unknown function (DUF1573) NPCBM_assoc PF10633.9 gi|73669250|ref|YP_305265.1| - 1.4 9.2 16.8 0.17 12.2 0.4 5.3 7 0 0 7 7 7 0 NPCBM-associated, NEW3 domain of alpha-galactosidase S-l_SbsC_C PF18316.1 gi|73669250|ref|YP_305265.1| - 2.9 8.4 12.7 39 4.8 0.3 5.3 4 0 0 4 4 4 0 S-layer protein SbsC C-terminal domain Malate_synthase PF01274.22 gi|73669251|ref|YP_305266.1| - 0.038 12.3 0.0 0.061 11.6 0.0 1.3 1 0 0 1 1 1 0 Malate synthase DUF5452 PF17533.2 gi|73669251|ref|YP_305266.1| - 0.78 9.8 5.6 3.6 7.6 3.2 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5452) tRNA-synt_1b PF00579.25 gi|73669252|ref|YP_305267.1| - 2.3e-58 197.8 0.0 2.8e-58 197.6 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.18 gi|73669252|ref|YP_305267.1| - 0.03 13.3 0.0 5.5 5.8 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (K) Thg1 PF04446.12 gi|73669253|ref|YP_305268.1| - 1.5e-22 80.0 0.0 2e-22 79.5 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Thg1C PF14413.6 gi|73669253|ref|YP_305268.1| - 1.9e-07 31.3 0.1 2.6e-07 30.8 0.1 1.2 1 0 0 1 1 1 1 Thg1 C terminal domain PRC PF05239.16 gi|73669254|ref|YP_305269.1| - 6.3e-15 55.0 1.0 8.1e-15 54.7 1.0 1.1 1 0 0 1 1 1 1 PRC-barrel domain Ldh_1_N PF00056.23 gi|73669255|ref|YP_305270.1| - 5e-37 127.1 1.6 7.8e-37 126.5 1.6 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|73669255|ref|YP_305270.1| - 1.6e-29 103.0 0.0 2.5e-29 102.4 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 gi|73669255|ref|YP_305270.1| - 1.8e-05 24.3 2.2 4.8e-05 23.0 0.2 2.2 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase UDPG_MGDP_dh_N PF03721.14 gi|73669255|ref|YP_305270.1| - 0.0059 16.2 2.7 0.026 14.1 2.7 1.9 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Shikimate_DH PF01488.20 gi|73669255|ref|YP_305270.1| - 0.021 14.9 0.3 0.046 13.8 0.3 1.7 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF2344 PF10105.9 gi|73669255|ref|YP_305270.1| - 0.072 12.9 0.1 0.46 10.3 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2344) ThiF PF00899.21 gi|73669255|ref|YP_305270.1| - 0.13 11.6 0.2 0.28 10.5 0.2 1.5 1 0 0 1 1 1 0 ThiF family RNase_H_2 PF13482.6 gi|73669256|ref|YP_305271.1| - 4.9e-36 124.2 0.2 7.4e-36 123.6 0.2 1.3 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|73669256|ref|YP_305271.1| - 8.6e-05 22.3 0.0 0.21 11.2 0.0 2.2 2 0 0 2 2 2 2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB GPI PF06560.11 gi|73669257|ref|YP_305272.1| - 2.1e-50 170.5 0.2 2.6e-50 170.2 0.2 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.11 gi|73669257|ref|YP_305272.1| - 2.6e-05 23.9 0.2 9.3e-05 22.1 0.2 2.0 1 1 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|73669257|ref|YP_305272.1| - 0.00022 20.9 0.0 0.00034 20.2 0.0 1.2 1 0 0 1 1 1 1 Cupin ARD PF03079.14 gi|73669257|ref|YP_305272.1| - 0.031 14.4 0.7 0.15 12.3 0.0 2.0 2 0 0 2 2 2 0 ARD/ARD' family Ribosomal_L9_N PF01281.19 gi|73669257|ref|YP_305272.1| - 0.12 11.9 1.0 0.86 9.2 0.0 2.6 2 1 0 2 2 2 0 Ribosomal protein L9, N-terminal domain NRD1_2 PF01995.16 gi|73669258|ref|YP_305273.1| - 9.8e-99 329.4 0.5 1.1e-98 329.3 0.5 1.0 1 0 0 1 1 1 1 NrpR regulatory domains NRD1 and 2 DHHA1 PF02272.19 gi|73669259|ref|YP_305274.1| - 1.2e-18 67.9 2.8 1.2e-18 67.9 2.8 2.0 2 1 0 2 2 2 1 DHHA1 domain SelA PF03841.13 gi|73669259|ref|YP_305274.1| - 0.0048 16.0 0.0 0.0083 15.2 0.0 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase DHH PF01368.20 gi|73669259|ref|YP_305274.1| - 0.075 13.3 0.2 0.15 12.3 0.2 1.5 1 0 0 1 1 1 0 DHH family DUF1699 PF08004.11 gi|73669261|ref|YP_305276.1| - 7.1e-61 203.6 2.5 7.9e-61 203.5 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Radical_SAM_C PF16199.5 gi|73669262|ref|YP_305277.1| - 1e-26 92.8 0.1 2e-26 91.8 0.1 1.5 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|73669262|ref|YP_305277.1| - 5.3e-18 65.9 0.0 2e-17 64.1 0.0 1.9 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|73669262|ref|YP_305277.1| - 1.4e-10 41.4 0.0 4e-10 40.0 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|73669262|ref|YP_305277.1| - 1e-06 28.7 0.5 2.4e-06 27.5 0.5 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73669262|ref|YP_305277.1| - 0.00042 20.7 0.1 0.0009 19.6 0.1 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain RHH_8 PF17723.1 gi|73669262|ref|YP_305277.1| - 0.011 16.0 0.0 0.055 13.6 0.0 2.1 2 0 0 2 2 2 0 Ribbon-Helix-Helix transcriptional regulator family zinc_ribbon_4 PF13717.6 gi|73669262|ref|YP_305277.1| - 0.14 12.1 1.0 0.31 11.0 1.0 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|73669262|ref|YP_305277.1| - 0.19 11.5 1.1 0.52 10.1 1.1 1.7 1 0 0 1 1 1 0 zinc-ribbon domain S-layer PF07752.11 gi|73669265|ref|YP_305280.1| - 7.8e-154 510.2 37.8 8.1e-79 264.3 14.6 2.1 2 0 0 2 2 2 2 S-layer protein PGF-CTERM PF18204.1 gi|73669265|ref|YP_305280.1| - 3.2e-09 36.5 1.1 3.2e-09 36.5 1.1 1.7 2 0 0 2 2 2 1 PGF-CTERM motif mRNA_cap_C PF03919.15 gi|73669265|ref|YP_305280.1| - 0.069 13.8 0.9 20 5.9 0.1 2.7 2 0 0 2 2 2 0 mRNA capping enzyme, C-terminal domain MucBP_2 PF17965.1 gi|73669265|ref|YP_305280.1| - 0.075 13.6 9.1 3.2 8.4 0.4 4.4 4 0 0 4 4 4 0 Mucin binding domain FOG_N PF15888.5 gi|73669265|ref|YP_305280.1| - 0.14 12.5 1.7 0.25 11.7 0.2 2.2 2 0 0 2 2 2 0 Folded gastrulation N-terminus SOG2 PF10428.9 gi|73669266|ref|YP_305281.1| - 0.0046 16.2 2.7 0.0039 16.5 2.7 1.1 1 0 0 1 1 1 1 RAM signalling pathway protein GXGXG PF01493.19 gi|73669268|ref|YP_305283.1| - 0.015 14.9 0.1 0.018 14.6 0.1 1.2 1 0 0 1 1 1 0 GXGXG motif Molybdopterin PF00384.22 gi|73669269|ref|YP_305284.1| - 5.4e-14 52.0 0.0 1.8e-13 50.2 0.0 1.7 1 1 0 1 1 1 1 Molybdopterin oxidoreductase TPP_enzyme_M PF00205.22 gi|73669269|ref|YP_305284.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.6 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Hemerythrin PF01814.23 gi|73669270|ref|YP_305285.1| - 1.4e-13 51.6 10.0 2.9e-13 50.6 10.0 1.5 1 1 0 1 1 1 1 Hemerythrin HHE cation binding domain Fib_alpha PF08702.10 gi|73669270|ref|YP_305285.1| - 0.15 12.2 2.5 0.099 12.8 0.8 1.6 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family PhoU PF01895.19 gi|73669271|ref|YP_305286.1| - 9.3e-24 83.7 8.9 2.3e-20 72.8 1.4 3.2 3 1 0 3 3 3 2 PhoU domain MazE_antitoxin PF04014.18 gi|73669271|ref|YP_305286.1| - 3.1e-08 33.3 0.0 8.5e-08 32.0 0.0 1.7 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin ABC2_membrane PF01061.24 gi|73669272|ref|YP_305287.1| - 8.4e-32 110.3 22.0 1.1e-31 109.9 22.0 1.1 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|73669272|ref|YP_305287.1| - 4.3e-11 42.5 27.3 5.2e-11 42.2 27.3 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|73669273|ref|YP_305288.1| - 6.6e-30 104.4 0.0 1e-29 103.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669273|ref|YP_305288.1| - 3.4e-09 36.9 0.4 8.3e-06 25.8 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|73669273|ref|YP_305288.1| - 0.00019 22.0 0.0 0.00029 21.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73669273|ref|YP_305288.1| - 0.0023 17.6 0.3 0.0047 16.7 0.3 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain KdpD PF02702.17 gi|73669273|ref|YP_305288.1| - 0.0084 15.6 0.0 0.02 14.3 0.0 1.5 1 1 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain AAA_15 PF13175.6 gi|73669273|ref|YP_305288.1| - 0.012 15.4 0.0 0.026 14.2 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain Thymidylate_kin PF02223.17 gi|73669273|ref|YP_305288.1| - 0.045 13.4 0.1 0.32 10.6 0.1 2.0 1 1 0 1 1 1 0 Thymidylate kinase MukB PF04310.12 gi|73669273|ref|YP_305288.1| - 0.048 13.5 0.2 0.11 12.3 0.2 1.6 1 1 0 1 1 1 0 MukB N-terminal AAA_PrkA PF08298.11 gi|73669273|ref|YP_305288.1| - 0.072 12.0 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 PrkA AAA domain SMC_N PF02463.19 gi|73669273|ref|YP_305288.1| - 0.075 12.5 0.0 0.91 8.9 0.0 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 gi|73669273|ref|YP_305288.1| - 0.091 12.3 0.1 0.25 10.9 0.1 1.7 1 1 1 2 2 2 0 AAA domain AAA PF00004.29 gi|73669273|ref|YP_305288.1| - 0.098 13.1 0.1 0.86 10.0 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CbiQ PF02361.16 gi|73669274|ref|YP_305289.1| - 9.7e-25 87.5 10.1 9.7e-25 87.5 10.1 1.7 2 0 0 2 2 2 1 Cobalt transport protein ABC_tran PF00005.27 gi|73669275|ref|YP_305290.1| - 2.9e-57 193.0 0.1 1.6e-28 99.9 0.1 2.4 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|73669275|ref|YP_305290.1| - 6.8e-13 48.6 0.2 2.4e-05 23.9 0.0 2.5 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73669275|ref|YP_305290.1| - 3.6e-11 42.6 0.3 0.00021 20.9 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|73669275|ref|YP_305290.1| - 1.6e-10 41.3 8.8 0.016 15.0 0.2 4.5 3 2 2 5 5 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|73669275|ref|YP_305290.1| - 2.1e-09 38.0 0.0 0.0004 20.8 0.0 2.5 2 1 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|73669275|ref|YP_305290.1| - 1.3e-08 35.6 0.6 0.001 19.6 0.0 2.7 2 1 0 2 2 2 2 AAA domain T2SSE PF00437.20 gi|73669275|ref|YP_305290.1| - 3.2e-08 33.0 0.1 0.0027 16.8 0.1 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein RsgA_GTPase PF03193.16 gi|73669275|ref|YP_305290.1| - 5.7e-08 32.9 1.2 0.00044 20.2 0.2 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_25 PF13481.6 gi|73669275|ref|YP_305290.1| - 5.9e-08 32.5 1.0 0.017 14.7 0.0 3.1 3 0 0 3 3 3 2 AAA domain AAA_22 PF13401.6 gi|73669275|ref|YP_305290.1| - 4.8e-07 30.1 1.4 0.015 15.6 1.6 3.1 2 1 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|73669275|ref|YP_305290.1| - 1.6e-06 28.7 2.1 0.03 14.9 0.0 3.7 4 0 0 4 4 4 2 AAA domain AAA_28 PF13521.6 gi|73669275|ref|YP_305290.1| - 2.2e-06 28.0 1.2 0.017 15.4 0.0 2.6 2 0 0 2 2 2 2 AAA domain NACHT PF05729.12 gi|73669275|ref|YP_305290.1| - 5.7e-06 26.4 0.3 0.065 13.1 0.0 2.6 2 0 0 2 2 2 2 NACHT domain Rad17 PF03215.15 gi|73669275|ref|YP_305290.1| - 7.6e-06 26.0 0.1 0.0012 18.8 0.1 2.6 2 0 0 2 2 2 1 Rad17 P-loop domain ATPase_2 PF01637.18 gi|73669275|ref|YP_305290.1| - 8.6e-06 25.8 0.2 0.14 12.0 0.1 2.5 2 0 0 2 2 2 2 ATPase domain predominantly from Archaea AAA_5 PF07728.14 gi|73669275|ref|YP_305290.1| - 1.2e-05 25.3 0.4 0.21 11.6 0.1 2.8 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 gi|73669275|ref|YP_305290.1| - 1.6e-05 24.8 0.0 0.036 13.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|73669275|ref|YP_305290.1| - 2.9e-05 23.6 0.1 0.0079 15.6 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI SbcCD_C PF13558.6 gi|73669275|ref|YP_305290.1| - 3.5e-05 23.9 0.1 0.13 12.5 0.0 3.2 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 gi|73669275|ref|YP_305290.1| - 5.5e-05 23.2 0.3 0.36 10.9 0.0 2.8 2 1 0 2 2 2 2 50S ribosome-binding GTPase RNA_helicase PF00910.22 gi|73669275|ref|YP_305290.1| - 6.7e-05 23.2 1.2 0.12 12.8 0.1 3.5 3 1 0 3 3 3 1 RNA helicase AAA_7 PF12775.7 gi|73669275|ref|YP_305290.1| - 7.6e-05 22.3 0.3 0.041 13.4 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region NTPase_1 PF03266.15 gi|73669275|ref|YP_305290.1| - 9e-05 22.4 1.6 0.34 10.8 0.2 2.8 3 0 0 3 3 2 2 NTPase AAA_14 PF13173.6 gi|73669275|ref|YP_305290.1| - 0.00025 21.1 0.1 0.38 10.8 0.1 2.9 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|73669275|ref|YP_305290.1| - 0.00034 20.8 0.0 1.4 9.1 0.0 2.7 2 1 0 2 2 2 2 AAA domain DAP3 PF10236.9 gi|73669275|ref|YP_305290.1| - 0.00035 19.9 2.2 0.054 12.6 0.2 2.4 2 0 0 2 2 2 1 Mitochondrial ribosomal death-associated protein 3 AAA_24 PF13479.6 gi|73669275|ref|YP_305290.1| - 0.0006 19.6 1.0 0.35 10.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|73669275|ref|YP_305290.1| - 0.00062 20.2 0.1 0.073 13.5 0.0 3.0 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 gi|73669275|ref|YP_305290.1| - 0.0011 18.3 0.1 1.2 8.3 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin cobW PF02492.19 gi|73669275|ref|YP_305290.1| - 0.0017 18.0 1.9 1.1 8.8 0.0 2.7 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|73669275|ref|YP_305290.1| - 0.0022 17.1 0.1 0.31 10.0 0.0 2.4 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB FtsK_SpoIIIE PF01580.18 gi|73669275|ref|YP_305290.1| - 0.0035 16.7 0.4 0.56 9.5 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family CbiA PF01656.23 gi|73669275|ref|YP_305290.1| - 0.0052 16.8 2.3 0.011 15.8 0.0 2.5 2 1 0 2 2 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ATP_bind_1 PF03029.17 gi|73669275|ref|YP_305290.1| - 0.0062 16.3 0.6 0.92 9.2 0.0 2.5 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein G-alpha PF00503.20 gi|73669275|ref|YP_305290.1| - 0.008 15.4 2.0 2.2 7.3 0.0 2.7 2 1 1 3 3 3 1 G-protein alpha subunit DUF815 PF05673.13 gi|73669275|ref|YP_305290.1| - 0.0084 15.3 0.0 0.51 9.4 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF815) SRP54 PF00448.22 gi|73669275|ref|YP_305290.1| - 0.0088 15.7 1.4 0.24 11.0 0.0 2.7 3 0 0 3 3 2 1 SRP54-type protein, GTPase domain IstB_IS21 PF01695.17 gi|73669275|ref|YP_305290.1| - 0.012 15.4 0.4 2.4 7.8 0.1 2.6 2 0 0 2 2 2 0 IstB-like ATP binding protein TniB PF05621.11 gi|73669275|ref|YP_305290.1| - 0.012 15.0 1.5 1.7 8.0 0.2 3.2 3 0 0 3 3 3 0 Bacterial TniB protein NB-ARC PF00931.22 gi|73669275|ref|YP_305290.1| - 0.013 14.7 0.6 2.3 7.3 0.0 2.8 3 0 0 3 3 3 0 NB-ARC domain PIF1 PF05970.14 gi|73669275|ref|YP_305290.1| - 0.022 13.9 0.4 1.6 7.8 0.1 2.4 2 0 0 2 2 2 0 PIF1-like helicase PduV-EutP PF10662.9 gi|73669275|ref|YP_305290.1| - 0.025 14.3 0.3 1.5 8.6 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Viral_helicase1 PF01443.18 gi|73669275|ref|YP_305290.1| - 0.027 14.2 0.5 5 6.8 0.2 2.5 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 gi|73669275|ref|YP_305290.1| - 0.029 14.7 1.2 9.5 6.5 0.0 2.5 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|73669275|ref|YP_305290.1| - 0.04 13.6 0.2 5 6.8 0.1 2.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family TsaE PF02367.17 gi|73669275|ref|YP_305290.1| - 0.041 13.9 0.9 1.6 8.7 0.1 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE dNK PF01712.19 gi|73669275|ref|YP_305290.1| - 0.043 13.7 0.2 8.3 6.2 0.1 2.4 2 0 0 2 2 2 0 Deoxynucleoside kinase ATPase PF06745.13 gi|73669275|ref|YP_305290.1| - 0.05 12.9 1.5 9.4 5.5 0.1 3.2 3 0 0 3 3 3 0 KaiC ATP-synt_ab PF00006.25 gi|73669275|ref|YP_305290.1| - 0.05 13.2 0.1 1.5 8.4 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF3584 PF12128.8 gi|73669275|ref|YP_305290.1| - 0.071 10.6 0.2 0.14 9.6 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) MCM PF00493.23 gi|73669275|ref|YP_305290.1| - 0.083 12.0 0.2 2.4 7.2 0.0 2.3 2 0 0 2 2 2 0 MCM P-loop domain DUF87 PF01935.17 gi|73669275|ref|YP_305290.1| - 0.083 13.0 0.8 2.9 7.9 0.1 2.6 2 0 0 2 2 2 0 Helicase HerA, central domain Ada3 PF10198.9 gi|73669275|ref|YP_305290.1| - 0.086 13.0 0.3 6.4 6.9 0.1 2.5 2 0 0 2 2 2 0 Histone acetyltransferases subunit 3 TrwB_AAD_bind PF10412.9 gi|73669275|ref|YP_305290.1| - 0.087 11.7 0.8 1.5 7.6 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain APS_kinase PF01583.20 gi|73669275|ref|YP_305290.1| - 0.11 12.4 0.2 18 5.2 0.1 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase MobB PF03205.14 gi|73669275|ref|YP_305290.1| - 0.17 11.8 0.3 2.9 7.8 0.0 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DLIC PF05783.11 gi|73669275|ref|YP_305290.1| - 0.2 10.4 1.5 2.6 6.8 0.1 2.1 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) ABC_ATPase PF09818.9 gi|73669275|ref|YP_305290.1| - 1.6 7.4 6.2 9 5.0 0.1 3.3 4 0 0 4 4 3 0 Predicted ATPase of the ABC class NPCBM_assoc PF10633.9 gi|73669276|ref|YP_305291.1| - 0.024 14.9 0.0 9.9 6.5 0.0 2.9 3 0 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase CobN-Mg_chel PF02514.16 gi|73669277|ref|YP_305292.1| - 0 1239.6 0.0 0 1239.4 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase PQQ PF01011.21 gi|73669278|ref|YP_305293.1| - 4e-11 42.3 7.9 0.098 12.6 0.2 6.2 7 0 0 7 7 7 4 PQQ enzyme repeat PQQ_2 PF13360.6 gi|73669278|ref|YP_305293.1| - 1.9e-09 37.5 0.0 1.1e-06 28.4 0.0 3.1 1 1 1 2 2 2 2 PQQ-like domain PD40 PF07676.12 gi|73669278|ref|YP_305293.1| - 4.6e-06 26.4 6.2 0.55 10.2 0.0 6.0 6 0 0 6 6 6 2 WD40-like Beta Propeller Repeat ANAPC4_WD40 PF12894.7 gi|73669278|ref|YP_305293.1| - 5.9e-05 23.3 0.0 0.012 15.9 0.0 4.2 4 1 2 6 6 6 2 Anaphase-promoting complex subunit 4 WD40 domain SdiA-regulated PF06977.11 gi|73669278|ref|YP_305293.1| - 0.002 17.4 0.0 0.014 14.7 0.0 2.2 2 1 1 3 3 3 1 SdiA-regulated WD40 PF00400.32 gi|73669278|ref|YP_305293.1| - 0.0027 18.5 0.9 17 6.5 0.0 5.1 5 0 0 5 5 5 1 WD domain, G-beta repeat TolB_like PF15869.5 gi|73669278|ref|YP_305293.1| - 0.0085 15.4 0.0 6.5 5.9 0.0 3.2 2 1 1 3 3 3 2 TolB-like 6-blade propeller-like Arylsulfotrans PF05935.11 gi|73669278|ref|YP_305293.1| - 0.046 12.6 0.2 2 7.2 0.0 2.8 2 1 0 2 2 2 0 Arylsulfotransferase (ASST) PQQ_2 PF13360.6 gi|73669279|ref|YP_305294.1| - 2.4e-11 43.7 2.2 8.9e-06 25.4 0.0 3.4 1 1 1 3 3 3 3 PQQ-like domain PQQ PF01011.21 gi|73669279|ref|YP_305294.1| - 8.4e-07 28.6 9.4 0.079 12.9 0.0 6.2 5 0 0 5 5 5 2 PQQ enzyme repeat Cytochrom_D1 PF02239.16 gi|73669279|ref|YP_305294.1| - 0.00021 19.9 0.1 0.0004 19.0 0.1 1.5 1 0 0 1 1 1 1 Cytochrome D1 heme domain WD40 PF00400.32 gi|73669279|ref|YP_305294.1| - 0.00033 21.4 4.4 0.18 12.7 0.0 5.1 5 1 0 5 5 5 1 WD domain, G-beta repeat PQQ_3 PF13570.6 gi|73669279|ref|YP_305294.1| - 0.00035 21.0 15.0 0.085 13.4 0.0 7.4 8 0 0 8 8 8 1 PQQ-like domain ANAPC4_WD40 PF12894.7 gi|73669279|ref|YP_305294.1| - 0.0012 19.1 0.1 0.047 14.0 0.0 3.0 2 1 1 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 gi|73669279|ref|YP_305294.1| - 0.0032 17.4 0.1 4.4 7.4 0.0 4.7 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat DUF5122 PF17164.4 gi|73669279|ref|YP_305294.1| - 0.013 15.8 6.8 0.21 11.9 0.1 4.3 4 1 0 4 4 4 0 Domain of unknown function (DUF5122) beta-propeller S-layer PF07752.11 gi|73669281|ref|YP_305296.1| - 4.6e-69 232.4 7.0 3.2e-48 164.0 0.0 3.1 2 1 0 2 2 2 2 S-layer protein AAA_lid_2 PF17863.1 gi|73669282|ref|YP_305297.1| - 2.1e-24 85.1 0.0 4.9e-24 84.0 0.0 1.7 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 gi|73669282|ref|YP_305297.1| - 3.3e-13 49.5 0.5 3e-11 43.1 0.5 2.4 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI VWA_2 PF13519.6 gi|73669282|ref|YP_305297.1| - 5.4e-13 49.5 0.0 1.6e-12 48.0 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_5 PF07728.14 gi|73669282|ref|YP_305297.1| - 1.2e-08 35.1 0.0 9.4e-05 22.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) VWA PF00092.28 gi|73669282|ref|YP_305297.1| - 2.9e-07 30.9 0.0 6.2e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain MCM PF00493.23 gi|73669282|ref|YP_305297.1| - 3e-06 26.5 0.8 0.00095 18.3 0.0 3.5 3 1 0 3 3 3 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|73669282|ref|YP_305297.1| - 0.0011 18.8 0.1 0.21 11.3 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_16 PF13191.6 gi|73669282|ref|YP_305297.1| - 0.005 17.2 0.2 0.024 15.0 0.1 2.3 2 1 0 2 2 2 1 AAA ATPase domain AAA_7 PF12775.7 gi|73669282|ref|YP_305297.1| - 0.008 15.7 0.0 0.024 14.1 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_3 PF07726.11 gi|73669282|ref|YP_305297.1| - 0.012 15.4 0.0 0.91 9.4 0.0 2.8 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) RR_TM4-6 PF06459.12 gi|73669282|ref|YP_305297.1| - 0.024 14.5 10.0 0.038 13.8 10.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 AAA PF00004.29 gi|73669282|ref|YP_305297.1| - 0.027 14.9 0.0 0.099 13.1 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|73669282|ref|YP_305297.1| - 0.032 14.5 0.0 0.12 12.6 0.0 2.0 1 0 0 1 1 1 0 AAA domain Paf1 PF03985.13 gi|73669282|ref|YP_305297.1| - 2.5 7.0 19.6 3.8 6.4 19.6 1.2 1 0 0 1 1 1 0 Paf1 NARP1 PF12569.8 gi|73669282|ref|YP_305297.1| - 2.6 6.9 16.9 3.9 6.3 16.9 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 SAPS PF04499.15 gi|73669282|ref|YP_305297.1| - 3.4 6.3 10.3 5.4 5.7 10.3 1.3 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Selenoprotein_S PF06936.11 gi|73669282|ref|YP_305297.1| - 4.5 7.0 15.3 8.4 6.2 15.3 1.3 1 0 0 1 1 1 0 Selenoprotein S (SelS) Afi1 PF07792.12 gi|73669282|ref|YP_305297.1| - 6.9 7.2 12.5 14 6.1 12.5 1.4 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking ALMT PF11744.8 gi|73669282|ref|YP_305297.1| - 7.8 5.2 6.3 11 4.7 6.3 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Presenilin PF01080.17 gi|73669282|ref|YP_305297.1| - 9.2 4.9 12.9 13 4.4 12.9 1.1 1 0 0 1 1 1 0 Presenilin DNA_pol_B PF00136.21 gi|73669283|ref|YP_305298.1| - 5.5e-109 364.9 0.0 8e-109 364.4 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|73669283|ref|YP_305298.1| - 1.1e-54 185.8 0.0 1.8e-54 185.1 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.9 gi|73669283|ref|YP_305298.1| - 0.0041 16.8 0.0 0.0088 15.7 0.0 1.5 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB PBP_like_2 PF12849.7 gi|73669284|ref|YP_305299.1| - 2e-44 152.4 4.8 4.1e-44 151.3 4.8 1.4 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|73669284|ref|YP_305299.1| - 2.6e-17 62.6 0.2 3.3e-17 62.2 0.2 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|73669284|ref|YP_305299.1| - 5.2e-05 23.1 0.0 0.00013 21.8 0.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Jacalin PF01419.17 gi|73669284|ref|YP_305299.1| - 0.078 12.9 0.1 2.4 8.1 0.1 2.4 1 1 0 1 1 1 0 Jacalin-like lectin domain BPD_transp_1 PF00528.22 gi|73669285|ref|YP_305300.1| - 1.3e-22 80.4 19.4 1.3e-22 80.4 19.4 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF4227 PF14004.6 gi|73669285|ref|YP_305300.1| - 6.5 6.8 7.0 3.8 7.6 2.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) BPD_transp_1 PF00528.22 gi|73669286|ref|YP_305301.1| - 2.8e-25 89.1 15.1 2.8e-25 89.1 15.1 2.6 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component DUF2780 PF11075.8 gi|73669286|ref|YP_305301.1| - 0.1 12.7 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function VcgC/VcgE (DUF2780) DUF3333 PF11812.8 gi|73669286|ref|YP_305301.1| - 0.13 12.5 0.9 0.31 11.2 0.9 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) TssN PF17555.2 gi|73669286|ref|YP_305301.1| - 0.26 10.7 12.4 0.17 11.2 1.8 3.2 3 1 0 3 3 3 0 Type VI secretion system, TssN ABC_tran PF00005.27 gi|73669287|ref|YP_305302.1| - 2.8e-32 112.1 0.0 4.2e-32 111.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669287|ref|YP_305302.1| - 1.3e-10 41.6 0.0 0.00048 20.0 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73669287|ref|YP_305302.1| - 3.2e-07 30.0 0.1 4.8e-05 22.9 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|73669287|ref|YP_305302.1| - 4.5e-05 23.3 0.0 6.7e-05 22.8 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73669287|ref|YP_305302.1| - 0.00013 21.9 0.0 0.00023 21.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase Rad17 PF03215.15 gi|73669287|ref|YP_305302.1| - 0.00034 20.6 0.0 0.00055 19.9 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 gi|73669287|ref|YP_305302.1| - 0.00053 19.7 0.0 0.0011 18.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|73669287|ref|YP_305302.1| - 0.00054 20.5 0.0 0.001 19.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73669287|ref|YP_305302.1| - 0.00077 19.9 0.0 0.0011 19.4 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|73669287|ref|YP_305302.1| - 0.0013 19.1 0.0 0.0027 18.0 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|73669287|ref|YP_305302.1| - 0.027 14.1 0.0 0.053 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|73669287|ref|YP_305302.1| - 0.058 13.9 0.0 0.11 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain PPV_E1_C PF00519.17 gi|73669287|ref|YP_305302.1| - 0.063 12.1 0.0 0.098 11.5 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase NB-ARC PF00931.22 gi|73669287|ref|YP_305302.1| - 0.09 11.9 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_33 PF13671.6 gi|73669287|ref|YP_305302.1| - 0.091 12.9 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 gi|73669287|ref|YP_305302.1| - 0.094 11.5 0.1 0.39 9.5 0.1 1.9 2 0 0 2 2 2 0 Adenovirus IVa2 protein AAA PF00004.29 gi|73669287|ref|YP_305302.1| - 0.15 12.5 0.0 0.38 11.2 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Viral_helicase1 PF01443.18 gi|73669287|ref|YP_305302.1| - 0.17 11.6 0.0 0.33 10.6 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase PhoU PF01895.19 gi|73669288|ref|YP_305303.1| - 3.7e-37 126.7 7.9 1e-20 74.0 2.3 2.1 2 0 0 2 2 2 2 PhoU domain Amidohydro_1 PF01979.20 gi|73669289|ref|YP_305304.1| - 1.2e-23 84.0 0.0 1.8e-23 83.5 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|73669289|ref|YP_305304.1| - 5e-15 55.9 0.0 1.3e-06 28.2 0.0 3.0 3 0 0 3 3 3 2 Amidohydrolase family KH_1 PF00013.29 gi|73669290|ref|YP_305305.1| - 1.9e-12 46.8 2.8 5.2e-08 32.6 0.1 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 gi|73669290|ref|YP_305305.1| - 0.00068 19.4 5.2 0.084 12.7 0.2 2.6 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 gi|73669290|ref|YP_305305.1| - 0.019 14.8 5.3 2 8.3 0.4 3.3 2 1 1 3 3 3 0 KH domain Glyco_hydro2_C5 PF18565.1 gi|73669290|ref|YP_305305.1| - 0.12 12.2 0.0 1.4 8.8 0.0 2.0 2 0 0 2 2 2 0 Glycoside hydrolase family 2 C-terminal domain 5 RIO1 PF01163.22 gi|73669291|ref|YP_305306.1| - 2.5e-62 209.8 0.2 3.5e-62 209.4 0.2 1.1 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|73669291|ref|YP_305306.1| - 7.8e-08 32.0 0.1 1.2e-07 31.4 0.1 1.4 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 gi|73669291|ref|YP_305306.1| - 0.00044 19.7 0.1 0.0043 16.4 0.0 2.1 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 gi|73669291|ref|YP_305306.1| - 0.0015 17.4 0.1 0.0025 16.7 0.1 1.3 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 gi|73669291|ref|YP_305306.1| - 0.0042 17.0 0.2 1.2 9.0 0.1 2.5 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 gi|73669291|ref|YP_305306.1| - 0.024 13.9 0.1 0.037 13.3 0.1 1.6 1 1 0 1 1 1 0 Protein tyrosine kinase Haspin_kinase PF12330.8 gi|73669291|ref|YP_305306.1| - 0.1 11.5 0.0 0.11 11.4 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Choline_kinase PF01633.20 gi|73669291|ref|YP_305306.1| - 0.11 12.0 0.5 0.27 10.8 0.2 1.7 1 1 0 1 1 1 0 Choline/ethanolamine kinase eIF-1a PF01176.19 gi|73669292|ref|YP_305307.1| - 4.4e-13 48.8 1.3 5.3e-13 48.6 1.3 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 AAA PF00004.29 gi|73669293|ref|YP_305308.1| - 5.5e-36 123.9 0.0 9.4e-36 123.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 gi|73669293|ref|YP_305308.1| - 1.6e-08 34.9 0.0 3.4e-08 33.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_lid_3 PF17862.1 gi|73669293|ref|YP_305308.1| - 2e-06 27.5 0.1 4.8e-06 26.3 0.1 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_22 PF13401.6 gi|73669293|ref|YP_305308.1| - 2.4e-05 24.6 0.4 0.0022 18.3 0.0 2.5 1 1 1 2 2 2 1 AAA domain TIP49 PF06068.13 gi|73669293|ref|YP_305308.1| - 2.7e-05 23.5 0.0 0.00011 21.6 0.0 1.9 2 1 1 3 3 3 1 TIP49 P-loop domain AAA_16 PF13191.6 gi|73669293|ref|YP_305308.1| - 7.1e-05 23.3 0.2 0.0012 19.2 0.1 2.5 1 1 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.17 gi|73669293|ref|YP_305308.1| - 0.00029 20.6 0.0 0.00047 19.9 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein DUF815 PF05673.13 gi|73669293|ref|YP_305308.1| - 0.00047 19.4 0.0 0.0034 16.6 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_5 PF07728.14 gi|73669293|ref|YP_305308.1| - 0.00049 20.1 0.0 0.0018 18.3 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|73669293|ref|YP_305308.1| - 0.00088 19.1 0.0 0.0025 17.6 0.0 1.7 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_28 PF13521.6 gi|73669293|ref|YP_305308.1| - 0.0011 19.2 0.0 0.0029 17.9 0.0 1.7 2 0 0 2 2 1 1 AAA domain Mg_chelatase PF01078.21 gi|73669293|ref|YP_305308.1| - 0.0015 18.0 0.1 0.0029 17.0 0.1 1.5 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|73669293|ref|YP_305308.1| - 0.0022 17.5 0.1 0.021 14.3 0.0 2.1 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_33 PF13671.6 gi|73669293|ref|YP_305308.1| - 0.0024 18.0 0.0 0.0044 17.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|73669293|ref|YP_305308.1| - 0.0025 18.4 0.0 0.0058 17.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|73669293|ref|YP_305308.1| - 0.0046 16.7 0.1 0.0092 15.7 0.1 1.5 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 gi|73669293|ref|YP_305308.1| - 0.025 14.0 0.0 0.085 12.3 0.0 1.8 2 0 0 2 2 2 0 Bacterial TniB protein TsaE PF02367.17 gi|73669293|ref|YP_305308.1| - 0.026 14.5 0.0 0.049 13.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 gi|73669293|ref|YP_305308.1| - 0.027 13.6 0.0 0.057 12.5 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 RNA_helicase PF00910.22 gi|73669293|ref|YP_305308.1| - 0.028 14.8 0.0 0.068 13.6 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Bac_DnaA PF00308.18 gi|73669293|ref|YP_305308.1| - 0.033 14.0 0.0 0.06 13.2 0.0 1.4 1 1 0 1 1 1 0 Bacterial dnaA protein PduV-EutP PF10662.9 gi|73669293|ref|YP_305308.1| - 0.035 13.9 0.0 0.073 12.8 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Sigma54_activat PF00158.26 gi|73669293|ref|YP_305308.1| - 0.038 13.7 0.0 0.096 12.4 0.0 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain ABC_tran PF00005.27 gi|73669293|ref|YP_305308.1| - 0.064 13.8 0.0 0.22 12.0 0.0 1.8 2 0 0 2 2 2 0 ABC transporter PhoH PF02562.16 gi|73669293|ref|YP_305308.1| - 0.082 12.4 0.0 0.13 11.6 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein Torsin PF06309.11 gi|73669293|ref|YP_305308.1| - 0.1 12.7 0.0 0.25 11.5 0.0 1.6 1 0 0 1 1 1 0 Torsin RsgA_GTPase PF03193.16 gi|73669293|ref|YP_305308.1| - 0.12 12.2 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase NACHT PF05729.12 gi|73669293|ref|YP_305308.1| - 0.18 11.7 0.0 0.4 10.6 0.0 1.6 1 0 0 1 1 1 0 NACHT domain ATP-synt_ab PF00006.25 gi|73669293|ref|YP_305308.1| - 0.19 11.4 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain PEPCK_ATP PF01293.20 gi|73669293|ref|YP_305308.1| - 0.21 10.2 0.0 0.33 9.6 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase Lactamase_B_2 PF12706.7 gi|73669295|ref|YP_305310.1| - 3.4e-20 72.4 0.0 8.8e-10 38.4 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|73669295|ref|YP_305310.1| - 2.6e-10 40.6 0.0 2e-09 37.7 0.0 2.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|73669295|ref|YP_305310.1| - 0.00011 21.8 0.0 0.00021 20.9 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease NAD_binding_10 PF13460.6 gi|73669295|ref|YP_305310.1| - 0.02 14.8 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding Alpha-amylase PF00128.24 gi|73669296|ref|YP_305311.1| - 1.2e-28 100.6 2.7 6e-18 65.5 0.6 2.4 2 1 0 2 2 2 2 Alpha amylase, catalytic domain hDGE_amylase PF14701.6 gi|73669296|ref|YP_305311.1| - 0.047 12.8 0.0 0.076 12.1 0.0 1.3 1 0 0 1 1 1 0 Glycogen debranching enzyme, glucanotransferase domain TP_methylase PF00590.20 gi|73669297|ref|YP_305312.1| - 1e-54 185.7 1.0 1.3e-54 185.4 1.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|73669297|ref|YP_305312.1| - 0.021 15.2 0.1 0.034 14.5 0.1 1.3 1 0 0 1 1 1 0 Radical SAM superfamily HEM4 PF02602.15 gi|73669298|ref|YP_305313.1| - 1.6e-42 145.5 0.0 1.9e-42 145.2 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD DUF2299 PF10061.9 gi|73669298|ref|YP_305313.1| - 0.086 12.6 0.0 9.5 6.0 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2299) Radical_SAM PF04055.21 gi|73669299|ref|YP_305314.1| - 1.7e-26 93.6 0.1 7.6e-25 88.2 0.0 2.2 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73669299|ref|YP_305314.1| - 9.7e-12 45.3 0.0 1.8e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73669299|ref|YP_305314.1| - 3.4e-07 30.4 0.0 6e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|73669299|ref|YP_305314.1| - 6.6e-05 23.4 0.0 0.00018 21.9 0.0 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain B PF02216.16 gi|73669299|ref|YP_305314.1| - 0.16 11.9 0.0 0.31 11.1 0.0 1.4 1 0 0 1 1 1 0 B domain CoA_binding_2 PF13380.6 gi|73669299|ref|YP_305314.1| - 0.19 12.2 0.0 3.6 8.1 0.0 2.3 2 0 0 2 2 2 0 CoA binding domain PQQ_2 PF13360.6 gi|73669300|ref|YP_305315.1| - 1.8e-66 224.1 16.5 1e-18 67.8 0.6 6.5 3 2 4 7 7 7 6 PQQ-like domain PQQ_3 PF13570.6 gi|73669300|ref|YP_305315.1| - 2.2e-52 174.3 66.0 6e-07 29.8 0.1 16.0 16 1 0 16 16 16 11 PQQ-like domain PQQ PF01011.21 gi|73669300|ref|YP_305315.1| - 5.4e-39 130.3 34.3 2.3e-06 27.2 0.0 13.1 13 0 0 13 13 13 10 PQQ enzyme repeat PKD PF00801.20 gi|73669300|ref|YP_305315.1| - 7.3e-33 112.2 28.9 1.1e-11 44.4 3.1 5.5 5 1 1 6 6 6 3 PKD domain CARDB PF07705.11 gi|73669300|ref|YP_305315.1| - 3.2e-25 88.3 5.8 3.2e-25 88.3 5.8 4.4 4 1 1 5 5 5 1 CARDB MG2 PF01835.19 gi|73669300|ref|YP_305315.1| - 9.3e-06 26.0 5.9 2.1 8.8 0.1 4.8 3 1 0 4 4 4 3 MG2 domain PKD_3 PF16820.5 gi|73669300|ref|YP_305315.1| - 0.00072 19.3 10.7 0.51 10.1 0.8 4.4 4 0 0 4 4 4 3 PKD-like domain Y_Y_Y PF07495.13 gi|73669300|ref|YP_305315.1| - 0.0057 16.6 14.0 0.054 13.4 0.0 5.3 5 0 0 5 5 5 2 Y_Y_Y domain DUF1935 PF09149.10 gi|73669300|ref|YP_305315.1| - 0.037 14.4 6.9 0.072 13.5 0.2 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF1935) Lysyl_oxidase PF01186.17 gi|73669300|ref|YP_305315.1| - 0.13 12.0 0.2 0.28 10.8 0.2 1.5 1 0 0 1 1 1 0 Lysyl oxidase DUF1727 PF08353.10 gi|73669300|ref|YP_305315.1| - 0.82 9.6 6.9 24 4.9 0.2 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF1727) EF-hand_1 PF00036.32 gi|73669300|ref|YP_305315.1| - 0.88 9.3 9.8 36 4.2 0.2 4.0 3 0 0 3 3 3 0 EF hand EF-hand_6 PF13405.6 gi|73669300|ref|YP_305315.1| - 1.2 9.3 11.7 29 4.9 0.2 4.4 4 0 0 4 4 3 0 EF-hand domain Kelch_6 PF13964.6 gi|73669300|ref|YP_305315.1| - 9.9 6.6 11.4 1.6 9.2 0.1 5.1 5 1 1 6 6 6 0 Kelch motif CobN-Mg_chel PF02514.16 gi|73669301|ref|YP_305316.1| - 2.5e-302 1005.7 0.1 4.1e-302 1005.0 0.1 1.3 1 0 0 1 1 1 1 CobN/Magnesium Chelatase PQQ_3 PF13570.6 gi|73669302|ref|YP_305317.1| - 3.4e-37 126.0 30.8 4.2e-13 49.3 0.3 8.2 8 2 0 8 8 8 6 PQQ-like domain PQQ_2 PF13360.6 gi|73669302|ref|YP_305317.1| - 4.1e-30 105.1 1.0 7.1e-15 55.2 0.0 3.8 1 1 2 4 4 4 3 PQQ-like domain PQQ PF01011.21 gi|73669302|ref|YP_305317.1| - 1.1e-16 59.9 17.4 9.6e-09 34.8 0.3 6.9 7 1 1 8 8 8 3 PQQ enzyme repeat DUF4905 PF16248.5 gi|73669302|ref|YP_305317.1| - 0.0025 17.6 0.6 0.077 12.9 0.2 3.2 2 1 2 4 4 4 1 Domain of unknown function (DUF4905) FixG_C PF11614.8 gi|73669303|ref|YP_305318.1| - 0.00025 21.3 0.2 0.00077 19.7 0.0 1.9 2 1 0 2 2 2 1 IG-like fold at C-terminal of FixG, putative oxidoreductase NPCBM_assoc PF10633.9 gi|73669303|ref|YP_305318.1| - 0.00037 20.7 0.1 0.001 19.3 0.0 1.8 1 1 0 1 1 1 1 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4702 PF15774.5 gi|73669303|ref|YP_305318.1| - 0.098 11.6 0.0 0.098 11.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4702) Cadherin-like PF12733.7 gi|73669303|ref|YP_305318.1| - 0.31 11.6 0.1 0.31 11.6 0.1 2.9 3 1 0 3 3 3 0 Cadherin-like beta sandwich domain DUF4796 PF16044.5 gi|73669303|ref|YP_305318.1| - 0.37 10.3 1.1 0.92 9.1 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4796) PKD PF00801.20 gi|73669304|ref|YP_305319.1| - 2.5e-86 283.5 56.5 4.8e-15 55.1 5.0 7.9 7 0 0 7 7 7 7 PKD domain PQQ_2 PF13360.6 gi|73669304|ref|YP_305319.1| - 1.6e-31 109.7 6.6 7.8e-22 78.0 0.2 4.6 2 1 3 5 5 5 4 PQQ-like domain PQQ_3 PF13570.6 gi|73669304|ref|YP_305319.1| - 6.9e-30 102.7 48.2 4.1e-06 27.1 0.1 9.5 9 0 0 9 9 8 7 PQQ-like domain NosD PF05048.13 gi|73669304|ref|YP_305319.1| - 2.4e-29 102.3 14.0 4.8e-29 101.3 12.6 2.2 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) PQQ PF01011.21 gi|73669304|ref|YP_305319.1| - 1.6e-18 65.7 10.3 0.0039 17.0 0.0 8.1 7 0 0 7 7 7 5 PQQ enzyme repeat PKD_3 PF16820.5 gi|73669304|ref|YP_305319.1| - 2.6e-09 36.7 21.1 0.0071 16.1 0.2 7.3 7 0 0 7 7 7 3 PKD-like domain Beta_helix PF13229.6 gi|73669304|ref|YP_305319.1| - 4e-09 36.5 13.3 4e-09 36.5 13.3 2.5 1 1 1 2 2 2 1 Right handed beta helix region MG2 PF01835.19 gi|73669304|ref|YP_305319.1| - 4.9e-09 36.5 18.1 0.75 10.3 0.1 7.3 4 1 3 7 7 7 4 MG2 domain DUF2381 PF09544.10 gi|73669304|ref|YP_305319.1| - 0.0064 16.1 1.0 25 4.3 0.0 4.0 3 1 0 4 4 4 0 Protein of unknown function (DUF2381) DUF3324 PF11797.8 gi|73669304|ref|YP_305319.1| - 0.33 10.9 17.4 6.5 6.7 0.2 6.0 7 0 0 7 7 7 0 Protein of unknown function C-terminal (DUF3324) SoxZ PF08770.11 gi|73669304|ref|YP_305319.1| - 0.36 10.6 7.4 26 4.7 0.1 4.6 5 0 0 5 5 5 0 Sulphur oxidation protein SoxZ Phage_Gp19 PF09355.10 gi|73669304|ref|YP_305319.1| - 9.2 6.7 8.2 29 5.1 0.0 4.2 5 0 0 5 5 5 0 Phage protein Gp19/Gp15/Gp42 PQQ_3 PF13570.6 gi|73669305|ref|YP_305320.1| - 1.2e-09 38.4 36.7 0.083 13.4 0.4 8.7 9 0 0 9 9 9 6 PQQ-like domain PQQ_2 PF13360.6 gi|73669305|ref|YP_305320.1| - 1.5e-09 37.8 0.0 1.6e-05 24.6 0.0 3.4 1 1 0 2 2 2 2 PQQ-like domain PKD PF00801.20 gi|73669306|ref|YP_305321.1| - 1.2e-139 454.4 103.1 1.2e-15 57.1 3.4 12.6 12 0 0 12 12 12 11 PKD domain PQQ_3 PF13570.6 gi|73669306|ref|YP_305321.1| - 1.4e-65 216.3 61.0 2.6e-06 27.7 0.1 17.8 17 1 1 18 18 17 13 PQQ-like domain PQQ_2 PF13360.6 gi|73669306|ref|YP_305321.1| - 6.1e-63 212.6 8.1 1.3e-26 93.7 0.6 6.7 2 2 4 6 6 6 6 PQQ-like domain NosD PF05048.13 gi|73669306|ref|YP_305321.1| - 7e-57 192.5 72.6 6.1e-33 114.1 28.8 5.1 5 1 1 6 6 6 3 Periplasmic copper-binding protein (NosD) PQQ PF01011.21 gi|73669306|ref|YP_305321.1| - 1e-26 91.5 36.3 0.045 13.7 0.1 16.0 17 0 0 17 17 17 8 PQQ enzyme repeat PKD_3 PF16820.5 gi|73669306|ref|YP_305321.1| - 2.6e-14 52.7 39.3 0.057 13.2 0.3 11.4 11 0 0 11 11 11 6 PKD-like domain Beta_helix PF13229.6 gi|73669306|ref|YP_305321.1| - 9.1e-13 48.4 49.8 2.5e-09 37.2 28.9 5.4 4 1 1 5 5 5 3 Right handed beta helix region MG2 PF01835.19 gi|73669306|ref|YP_305321.1| - 1.4e-12 47.9 36.7 0.11 13.0 0.1 10.6 8 1 3 11 11 11 7 MG2 domain DUF2381 PF09544.10 gi|73669306|ref|YP_305321.1| - 0.0017 18.0 7.4 35 3.8 0.0 6.9 7 0 0 7 7 7 0 Protein of unknown function (DUF2381) LPD25 PF18840.1 gi|73669306|ref|YP_305321.1| - 0.034 14.7 0.1 85 3.8 0.0 4.2 3 0 0 3 3 3 0 Large polyvalent protein associated domain 25 DUF3324 PF11797.8 gi|73669306|ref|YP_305321.1| - 0.3 11.1 28.9 9 6.3 0.2 8.5 10 0 0 10 10 10 0 Protein of unknown function C-terminal (DUF3324) EF-hand_6 PF13405.6 gi|73669306|ref|YP_305321.1| - 9.8 6.4 12.4 16 5.8 0.3 5.1 5 0 0 5 5 4 0 EF-hand domain PQQ_3 PF13570.6 gi|73669307|ref|YP_305322.1| - 3e-09 37.1 36.1 0.00019 21.8 0.3 8.8 8 0 0 8 8 8 6 PQQ-like domain PQQ_2 PF13360.6 gi|73669307|ref|YP_305322.1| - 9.6e-09 35.2 0.2 0.007 16.0 0.0 3.5 1 1 1 3 3 3 3 PQQ-like domain PQQ PF01011.21 gi|73669307|ref|YP_305322.1| - 0.0074 16.2 8.4 37 4.5 0.1 6.3 6 0 0 6 6 6 1 PQQ enzyme repeat PQQ_3 PF13570.6 gi|73669308|ref|YP_305323.1| - 6.9e-93 303.1 93.3 2.1e-08 34.4 0.0 24.1 24 0 0 24 24 24 20 PQQ-like domain PKD PF00801.20 gi|73669308|ref|YP_305323.1| - 2.4e-88 290.0 58.2 9.3e-14 51.0 0.5 8.4 7 0 0 7 7 7 7 PKD domain PQQ_2 PF13360.6 gi|73669308|ref|YP_305323.1| - 5.6e-87 291.3 6.9 3.3e-21 76.0 0.0 10.0 3 3 4 9 9 9 8 PQQ-like domain PQQ PF01011.21 gi|73669308|ref|YP_305323.1| - 1.5e-45 151.0 48.5 3e-05 23.7 0.0 18.9 19 0 0 19 19 19 12 PQQ enzyme repeat NosD PF05048.13 gi|73669308|ref|YP_305323.1| - 1.3e-23 83.5 10.4 1.3e-23 83.5 10.4 2.8 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73669308|ref|YP_305323.1| - 3e-09 36.9 6.1 3e-09 36.9 6.1 2.5 2 0 0 2 2 1 1 Right handed beta helix region MG2 PF01835.19 gi|73669308|ref|YP_305323.1| - 1.7e-08 34.8 19.8 1.4 9.4 0.1 7.4 5 1 2 8 8 8 5 MG2 domain PKD_3 PF16820.5 gi|73669308|ref|YP_305323.1| - 0.00034 20.3 23.3 0.41 10.4 0.2 7.6 8 0 0 8 8 8 2 PKD-like domain DUF2381 PF09544.10 gi|73669308|ref|YP_305323.1| - 0.0075 15.8 2.3 21 4.5 0.0 4.6 5 0 0 5 5 5 0 Protein of unknown function (DUF2381) SoxZ PF08770.11 gi|73669308|ref|YP_305323.1| - 0.31 10.8 4.7 27 4.6 0.1 4.2 3 0 0 3 3 3 0 Sulphur oxidation protein SoxZ DUF3324 PF11797.8 gi|73669308|ref|YP_305323.1| - 0.95 9.4 18.0 14 5.6 0.1 5.8 6 0 0 6 6 6 0 Protein of unknown function C-terminal (DUF3324) YscJ_FliF_C PF08345.11 gi|73669310|ref|YP_305325.1| - 0.022 15.1 0.1 0.19 12.1 0.0 2.1 2 0 0 2 2 2 0 Flagellar M-ring protein C-terminal GIY-YIG PF01541.24 gi|73669310|ref|YP_305325.1| - 0.72 10.2 5.7 1.5 9.1 1.8 2.5 1 1 1 2 2 2 0 GIY-YIG catalytic domain DUF3387 PF11867.8 gi|73669311|ref|YP_305326.1| - 2.8e-08 33.5 0.1 2.8e-08 33.5 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3387) HSP20 PF00011.21 gi|73669312|ref|YP_305327.1| - 4.7e-22 78.1 0.4 5.8e-22 77.8 0.4 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|73669312|ref|YP_305327.1| - 7.5e-13 47.8 0.0 1e-12 47.4 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|73669312|ref|YP_305327.1| - 0.014 16.4 0.0 0.024 15.6 0.0 1.4 1 1 0 1 1 1 0 CS domain FKBP26_C PF18046.1 gi|73669312|ref|YP_305327.1| - 0.026 14.6 0.1 3.6 7.7 0.0 2.3 2 0 0 2 2 2 0 FKBP26_C-terminal AMMECR1 PF01871.17 gi|73669313|ref|YP_305328.1| - 2.4e-49 167.1 0.0 2.8e-49 166.9 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 PGK PF00162.19 gi|73669314|ref|YP_305329.1| - 3.8e-107 358.5 0.4 4.4e-107 358.3 0.4 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase UDG PF03167.19 gi|73669315|ref|YP_305330.1| - 9e-39 132.9 0.0 1.1e-38 132.6 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily HSP20 PF00011.21 gi|73669316|ref|YP_305331.1| - 3.3e-06 27.2 0.1 4.2e-05 23.6 0.1 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|73669316|ref|YP_305331.1| - 0.0028 17.2 0.0 0.0052 16.3 0.0 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA Fer4 PF00037.27 gi|73669317|ref|YP_305332.1| - 2.3e-12 46.2 14.6 1.8e-07 30.7 5.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73669317|ref|YP_305332.1| - 9.1e-11 41.4 13.8 1.4e-05 24.9 6.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73669317|ref|YP_305332.1| - 1.3e-10 41.3 7.9 1.5e-10 41.1 7.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73669317|ref|YP_305332.1| - 1.3e-10 41.2 9.5 2.1e-10 40.6 9.6 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73669317|ref|YP_305332.1| - 1.6e-09 38.2 9.7 2.6e-09 37.5 9.8 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73669317|ref|YP_305332.1| - 7.7e-09 35.1 11.7 0.0005 20.0 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73669317|ref|YP_305332.1| - 8.1e-08 32.3 10.7 0.034 14.3 0.6 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73669317|ref|YP_305332.1| - 1.5e-07 32.2 7.1 9.1e-05 23.3 2.6 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|73669317|ref|YP_305332.1| - 7e-06 26.4 5.1 0.005 17.3 0.8 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73669317|ref|YP_305332.1| - 8.7e-06 26.3 12.4 0.00026 21.7 4.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73669317|ref|YP_305332.1| - 3.8e-05 24.1 13.8 0.014 15.9 1.3 2.2 1 1 1 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|73669317|ref|YP_305332.1| - 4.1e-05 24.0 10.4 0.0014 19.1 3.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73669317|ref|YP_305332.1| - 0.00045 20.5 13.8 0.0016 18.8 5.0 2.3 2 1 0 2 2 2 2 4Fe-4S binding domain ETF_QO PF05187.13 gi|73669317|ref|YP_305332.1| - 0.00077 19.6 3.6 0.00084 19.4 3.6 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_15 PF13459.6 gi|73669317|ref|YP_305332.1| - 0.002 18.8 12.8 0.99 10.2 12.7 2.6 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|73669317|ref|YP_305332.1| - 0.011 16.5 2.5 0.64 10.9 0.4 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73669317|ref|YP_305332.1| - 0.022 14.9 9.9 0.61 10.3 9.8 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Toxin_2 PF00451.19 gi|73669317|ref|YP_305332.1| - 1.9 8.9 9.4 1.8 8.9 0.4 2.1 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 PD40 PF07676.12 gi|73669318|ref|YP_305333.1| - 1.2e-12 47.4 15.7 0.0053 16.7 0.2 8.0 7 1 0 7 7 7 6 WD40-like Beta Propeller Repeat Lactonase PF10282.9 gi|73669319|ref|YP_305334.1| - 2.7e-07 30.2 5.1 0.0013 18.1 0.5 2.2 1 1 1 2 2 2 2 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|73669319|ref|YP_305334.1| - 2.2e-06 26.5 3.2 0.037 12.6 0.1 2.9 2 1 1 3 3 3 2 Cytochrome D1 heme domain SGL PF08450.12 gi|73669319|ref|YP_305334.1| - 0.00074 19.2 7.1 0.089 12.4 0.2 2.8 2 1 1 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|73669319|ref|YP_305334.1| - 0.0013 18.6 7.8 0.49 10.5 0.1 4.3 4 0 0 4 4 4 2 NHL repeat PD40 PF07676.12 gi|73669319|ref|YP_305334.1| - 0.0015 18.4 0.0 4.4 7.4 0.0 3.8 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat LSM14 PF12701.7 gi|73669319|ref|YP_305334.1| - 0.017 15.2 1.0 5.8 7.1 0.0 2.9 3 0 0 3 3 3 0 Scd6-like Sm domain MATH PF00917.26 gi|73669319|ref|YP_305334.1| - 0.02 15.1 0.0 7.1 6.8 0.0 3.0 3 0 0 3 3 3 0 MATH domain PCC_BT PF18140.1 gi|73669319|ref|YP_305334.1| - 0.051 13.9 6.7 0.18 12.2 0.7 3.2 2 1 1 3 3 3 0 Propionyl-coenzyme A carboxylase BT domain Thioredoxin_10 PF17991.1 gi|73669319|ref|YP_305334.1| - 0.073 13.6 2.2 8 7.0 0.1 2.4 2 0 0 2 2 2 0 Thioredoxin like C-terminal domain DUF1513 PF07433.11 gi|73669319|ref|YP_305334.1| - 0.15 11.2 0.8 6.7 5.7 0.0 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1513) Mannosidase_ig PF17786.1 gi|73669319|ref|YP_305334.1| - 0.3 11.7 0.2 0.3 11.7 0.2 2.6 2 1 1 3 3 3 0 Mannosidase Ig/CBM-like domain Cytochrom_D1 PF02239.16 gi|73669320|ref|YP_305335.1| - 0.0019 16.8 0.1 0.0023 16.6 0.1 1.1 1 0 0 1 1 1 1 Cytochrome D1 heme domain SGL PF08450.12 gi|73669320|ref|YP_305335.1| - 0.0091 15.6 0.1 0.012 15.2 0.1 1.2 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Lactonase PF10282.9 gi|73669320|ref|YP_305335.1| - 0.013 14.8 0.2 33 3.6 0.1 1.7 1 1 0 1 1 1 0 Lactonase, 7-bladed beta-propeller Arylesterase PF01731.20 gi|73669320|ref|YP_305335.1| - 0.063 13.5 0.1 0.22 11.7 0.1 1.9 1 1 1 2 2 2 0 Arylesterase MHC2-interact PF09307.10 gi|73669320|ref|YP_305335.1| - 0.15 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 CLIP, MHC2 interacting S-layer PF07752.11 gi|73669321|ref|YP_305336.1| - 1.3e-113 378.4 15.5 5.7e-38 130.4 0.1 3.0 1 1 1 3 3 3 3 S-layer protein Chibby PF14645.6 gi|73669321|ref|YP_305336.1| - 0.00099 19.5 3.1 0.25 11.7 0.3 3.2 3 0 0 3 3 3 2 Chibby family Fibrillarin PF01269.17 gi|73669321|ref|YP_305336.1| - 0.0023 17.1 0.0 0.55 9.3 0.0 3.1 3 0 0 3 3 3 1 Fibrillarin tRNA-synt_1c_C PF03950.18 gi|73669321|ref|YP_305336.1| - 0.014 15.3 1.8 20 5.0 0.1 3.4 3 0 0 3 3 3 0 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA_bind_4 PF18490.1 gi|73669321|ref|YP_305336.1| - 0.12 12.1 0.2 3.9 7.2 0.0 2.3 2 0 0 2 2 2 0 tRNA-binding domain VirDNA-topo-I_N PF09266.10 gi|73669321|ref|YP_305336.1| - 0.15 12.3 1.4 1.4 9.2 0.1 3.2 3 0 0 3 3 3 0 Viral DNA topoisomerase I, N-terminal S_layer_N PF05123.12 gi|73669321|ref|YP_305336.1| - 0.16 11.8 7.6 0.061 13.2 1.6 2.9 3 1 1 4 4 4 0 S-layer like family, N-terminal region Lipocalin PF00061.23 gi|73669321|ref|YP_305336.1| - 0.22 11.7 2.2 2.6 8.2 0.5 2.6 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family S-layer PF07752.11 gi|73669322|ref|YP_305337.1| - 8.4e-76 254.4 20.7 3.7e-38 131.0 8.2 2.1 2 0 0 2 2 2 2 S-layer protein tRNA-synt_1c_C PF03950.18 gi|73669322|ref|YP_305337.1| - 7.5e-06 25.9 1.3 0.13 12.2 0.1 2.6 2 1 0 2 2 2 2 tRNA synthetases class I (E and Q), anti-codon binding domain PD40 PF07676.12 gi|73669322|ref|YP_305337.1| - 8.7e-05 22.3 0.0 0.83 9.7 0.0 2.7 2 0 0 2 2 2 2 WD40-like Beta Propeller Repeat DUF2140 PF09911.9 gi|73669322|ref|YP_305337.1| - 0.0063 16.1 0.7 3.7 7.0 0.1 2.6 2 0 0 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2140) Chibby PF14645.6 gi|73669322|ref|YP_305337.1| - 0.0082 16.5 6.2 1.1 9.7 0.3 3.7 4 0 0 4 4 4 2 Chibby family eIF-5a PF01287.20 gi|73669322|ref|YP_305337.1| - 0.034 14.2 0.9 16 5.7 0.0 3.5 4 0 0 4 4 4 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold DCD PF06559.11 gi|73669322|ref|YP_305337.1| - 0.043 12.6 0.0 4.3 6.0 0.0 2.2 2 0 0 2 2 2 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) FtsQ PF03799.15 gi|73669322|ref|YP_305337.1| - 0.057 14.2 0.5 14 6.5 0.0 2.8 2 1 0 2 2 2 0 Cell division protein FtsQ LytTR PF04397.15 gi|73669322|ref|YP_305337.1| - 0.068 13.4 0.5 27 5.1 0.0 3.9 4 0 0 4 4 4 0 LytTr DNA-binding domain DUF756 PF05506.12 gi|73669322|ref|YP_305337.1| - 0.19 12.7 0.7 34 5.4 0.0 3.8 3 2 2 5 5 5 0 Domain of unknown function (DUF756) mRNA_triPase PF02940.15 gi|73669322|ref|YP_305337.1| - 0.33 10.6 2.9 11 5.6 0.2 2.2 2 0 0 2 2 2 0 mRNA capping enzyme, beta chain Cyc-maltodext_C PF10438.9 gi|73669322|ref|YP_305337.1| - 0.57 10.3 6.3 8.5 6.6 0.1 3.3 3 0 0 3 3 3 0 Cyclo-malto-dextrinase C-terminal domain HEAT_2 PF13646.6 gi|73669323|ref|YP_305338.1| - 1e-87 288.6 8.2 4.6e-18 65.4 0.2 7.4 1 1 6 7 7 7 7 HEAT repeats HEAT_PBS PF03130.16 gi|73669323|ref|YP_305338.1| - 2.6e-61 198.1 6.9 3.9e-06 27.0 0.1 13.2 13 0 0 13 13 13 9 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|73669323|ref|YP_305338.1| - 1.2e-46 152.7 0.3 7.7e-05 22.6 0.0 13.3 15 0 0 15 15 13 9 HEAT repeat HEAT_EZ PF13513.6 gi|73669323|ref|YP_305338.1| - 2e-33 114.4 8.0 0.0057 17.1 0.0 13.0 12 2 2 14 14 14 7 HEAT-like repeat Arm PF00514.23 gi|73669323|ref|YP_305338.1| - 2.2e-25 87.8 0.9 0.026 14.6 0.0 10.5 8 2 3 11 11 11 7 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|73669323|ref|YP_305338.1| - 2.7e-21 76.3 0.1 0.0011 19.1 0.0 8.4 2 2 6 9 9 9 5 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|73669323|ref|YP_305338.1| - 1.1e-11 44.0 0.0 0.0011 17.7 0.0 3.5 1 1 1 2 2 2 2 Adaptin N terminal region Aconitase_B_N PF11791.8 gi|73669323|ref|YP_305338.1| - 3.3e-06 27.2 0.2 4.6 7.3 0.0 6.4 3 3 3 7 7 7 1 Aconitate B N-terminal domain IFRD PF05004.13 gi|73669323|ref|YP_305338.1| - 0.00044 19.5 0.9 15 4.6 0.0 4.9 4 2 0 5 5 5 0 Interferon-related developmental regulator (IFRD) DUF5397 PF17375.2 gi|73669323|ref|YP_305338.1| - 0.0028 17.4 0.0 0.075 12.8 0.0 3.0 2 1 1 3 3 3 1 Family of unknown function (DUF5397) Vitellogenin_N PF01347.22 gi|73669323|ref|YP_305338.1| - 0.0048 15.4 0.0 0.61 8.4 0.0 3.5 3 2 2 5 5 5 1 Lipoprotein amino terminal region Vac14_Fab1_bd PF12755.7 gi|73669323|ref|YP_305338.1| - 0.0053 17.3 0.0 2.1e+02 2.6 0.0 5.9 5 3 2 8 8 8 0 Vacuolar 14 Fab1-binding region RTP1_C1 PF10363.9 gi|73669323|ref|YP_305338.1| - 0.068 13.4 0.0 1.8 8.7 0.0 3.2 3 2 0 3 3 3 0 Required for nuclear transport of RNA pol II C-terminus 1 UPF0147 PF03685.13 gi|73669323|ref|YP_305338.1| - 0.11 12.6 0.1 2.5 8.2 0.0 3.4 5 0 0 5 5 5 0 Uncharacterised protein family (UPF0147) TetR_C_16 PF17920.1 gi|73669323|ref|YP_305338.1| - 0.12 12.6 0.3 46 4.3 0.0 4.1 4 1 0 4 4 4 0 Tetracyclin repressor-like, C-terminal domain DUF945 PF06097.11 gi|73669324|ref|YP_305339.1| - 0.021 14.0 0.6 0.029 13.5 0.6 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF945) TcfC PF16967.5 gi|73669324|ref|YP_305339.1| - 0.053 13.0 0.0 0.13 11.7 0.0 1.7 1 0 0 1 1 1 0 E-set like domain HTH_24 PF13412.6 gi|73669325|ref|YP_305340.1| - 0.0011 18.5 0.2 0.0021 17.6 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|73669325|ref|YP_305340.1| - 0.0011 18.8 0.1 0.0039 17.0 0.1 1.8 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 gi|73669325|ref|YP_305340.1| - 0.0032 17.4 0.1 0.0054 16.7 0.1 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|73669325|ref|YP_305340.1| - 0.0055 16.6 0.1 0.0098 15.8 0.1 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|73669325|ref|YP_305340.1| - 0.0061 16.4 0.1 0.014 15.3 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB BetaGal_dom3 PF13363.6 gi|73669325|ref|YP_305340.1| - 0.037 13.6 0.0 0.13 11.8 0.0 1.9 3 0 0 3 3 3 0 Beta-galactosidase, domain 3 B-block_TFIIIC PF04182.12 gi|73669325|ref|YP_305340.1| - 0.046 13.9 0.1 0.11 12.7 0.0 1.7 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC HTH_53 PF18606.1 gi|73669325|ref|YP_305340.1| - 0.066 12.9 0.0 0.16 11.6 0.0 1.6 1 0 0 1 1 1 0 Zap helix turn helix N-terminal domain TFIIE_alpha PF02002.17 gi|73669325|ref|YP_305340.1| - 0.1 12.4 0.3 0.21 11.5 0.3 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit TBPIP PF07106.13 gi|73669325|ref|YP_305340.1| - 0.14 12.1 0.0 0.26 11.3 0.0 1.4 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain CFTR_R PF14396.6 gi|73669325|ref|YP_305340.1| - 0.16 11.5 0.1 0.21 11.1 0.1 1.1 1 0 0 1 1 1 0 Cystic fibrosis TM conductance regulator (CFTR), regulator domain Acetate_kinase PF00871.17 gi|73669326|ref|YP_305341.1| - 3.6e-156 519.8 0.1 4.1e-156 519.6 0.1 1.0 1 0 0 1 1 1 1 Acetokinase family PTA_PTB PF01515.19 gi|73669327|ref|YP_305342.1| - 9.4e-127 422.7 4.2 1.1e-126 422.5 4.2 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase LpxI_N PF17930.1 gi|73669327|ref|YP_305342.1| - 0.068 13.1 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 LpxI N-terminal domain FMN_red PF03358.15 gi|73669328|ref|YP_305343.1| - 9.4e-41 139.1 0.0 1.2e-40 138.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73669328|ref|YP_305343.1| - 1.4e-13 51.0 0.0 1.7e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|73669328|ref|YP_305343.1| - 0.004 17.4 0.0 0.0063 16.8 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|73669328|ref|YP_305343.1| - 0.065 13.4 0.0 0.15 12.3 0.0 1.6 1 1 1 2 2 2 0 Flavodoxin Voltage_CLC PF00654.20 gi|73669329|ref|YP_305344.1| - 7.4e-89 298.4 35.6 1.5e-88 297.4 32.3 2.0 1 1 1 2 2 2 2 Voltage gated chloride channel CBS PF00571.28 gi|73669329|ref|YP_305344.1| - 3.7e-22 78.5 0.8 2.2e-11 44.0 0.1 2.6 2 0 0 2 2 2 2 CBS domain HEAT_2 PF13646.6 gi|73669330|ref|YP_305345.1| - 1e-106 349.5 42.5 1.5e-17 63.7 0.4 10.1 1 1 9 10 10 10 10 HEAT repeats HEAT_PBS PF03130.16 gi|73669330|ref|YP_305345.1| - 1.5e-61 198.8 35.9 0.0013 19.2 0.0 18.8 19 0 0 19 19 19 11 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|73669330|ref|YP_305345.1| - 1.7e-56 183.3 3.5 0.0031 17.6 0.0 18.3 18 0 0 18 18 18 10 HEAT repeat HEAT_EZ PF13513.6 gi|73669330|ref|YP_305345.1| - 7e-34 115.8 22.3 0.0029 18.1 0.0 14.7 12 3 4 16 16 15 9 HEAT-like repeat Cnd1 PF12717.7 gi|73669330|ref|YP_305345.1| - 7.5e-18 65.1 5.8 0.0037 17.3 0.0 8.5 3 1 3 8 8 8 3 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|73669330|ref|YP_305345.1| - 1.6e-13 50.1 0.3 7.5e-08 31.4 0.0 5.0 1 1 1 3 3 3 3 Adaptin N terminal region RTP1_C1 PF10363.9 gi|73669330|ref|YP_305345.1| - 3.2e-12 46.6 0.0 0.036 14.2 0.0 7.0 2 2 4 6 6 6 3 Required for nuclear transport of RNA pol II C-terminus 1 Arm PF00514.23 gi|73669330|ref|YP_305345.1| - 4.2e-12 45.7 0.0 1.7 8.8 0.0 11.8 14 2 2 16 16 15 1 Armadillo/beta-catenin-like repeat NACHT PF05729.12 gi|73669330|ref|YP_305345.1| - 1.6e-10 41.1 0.0 4.1e-10 39.8 0.0 1.7 1 0 0 1 1 1 1 NACHT domain Vac14_Fab1_bd PF12755.7 gi|73669330|ref|YP_305345.1| - 3.1e-09 37.3 0.0 11 6.7 0.0 8.6 3 3 4 9 9 9 0 Vacuolar 14 Fab1-binding region Aconitase_B_N PF11791.8 gi|73669330|ref|YP_305345.1| - 1.1e-07 32.0 11.1 2.3 8.3 0.1 8.4 6 2 2 10 10 10 2 Aconitate B N-terminal domain RasGEF_N_2 PF14663.6 gi|73669330|ref|YP_305345.1| - 4.9e-06 26.9 1.7 2.6 8.5 0.0 6.4 6 3 1 7 7 6 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain AAA_22 PF13401.6 gi|73669330|ref|YP_305345.1| - 0.00066 20.0 0.0 0.0042 17.3 0.0 2.5 2 0 0 2 2 1 1 AAA domain DNA_alkylation PF08713.11 gi|73669330|ref|YP_305345.1| - 0.00078 19.2 1.0 0.064 13.0 0.0 3.9 2 1 2 4 4 4 1 DNA alkylation repair enzyme AAA_16 PF13191.6 gi|73669330|ref|YP_305345.1| - 0.0016 18.8 0.1 0.015 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA ATPase domain DUF3385 PF11865.8 gi|73669330|ref|YP_305345.1| - 0.0084 16.0 1.1 17 5.3 0.0 5.1 4 2 1 6 6 5 0 Domain of unknown function (DUF3385) API5 PF05918.11 gi|73669330|ref|YP_305345.1| - 0.0087 14.9 2.9 0.019 13.8 0.2 2.7 3 0 0 3 3 3 1 Apoptosis inhibitory protein 5 (API5) AAA_7 PF12775.7 gi|73669330|ref|YP_305345.1| - 0.019 14.5 0.0 0.038 13.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_30 PF13604.6 gi|73669330|ref|YP_305345.1| - 0.039 13.7 0.0 0.099 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|73669330|ref|YP_305345.1| - 0.039 13.9 0.1 0.15 11.9 0.1 2.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|73669330|ref|YP_305345.1| - 0.066 13.7 0.1 0.6 10.6 0.0 2.6 2 0 0 2 2 2 0 ABC transporter DUF2019 PF09450.10 gi|73669330|ref|YP_305345.1| - 0.14 12.1 2.6 6.5 6.8 0.0 4.5 4 1 1 5 5 5 0 Domain of unknown function (DUF2019) V-ATPase_H_N PF03224.14 gi|73669330|ref|YP_305345.1| - 0.21 10.8 1.6 28 3.9 0.3 4.4 2 1 4 6 6 6 0 V-ATPase subunit H Exo_endo_phos PF03372.23 gi|73669331|ref|YP_305346.1| - 0.0024 17.4 0.2 0.004 16.7 0.2 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|73669331|ref|YP_305346.1| - 0.017 15.0 0.0 0.036 13.9 0.0 1.7 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase HEAT_2 PF13646.6 gi|73669332|ref|YP_305347.1| - 6.3e-110 359.8 30.3 4.7e-20 71.8 0.6 7.3 1 1 6 7 7 7 7 HEAT repeats HEAT_PBS PF03130.16 gi|73669332|ref|YP_305347.1| - 1e-86 276.9 20.9 2.3e-06 27.7 0.1 14.3 14 0 0 14 14 14 12 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|73669332|ref|YP_305347.1| - 3.5e-66 213.4 15.5 0.00023 21.1 0.0 13.5 13 0 0 13 13 13 12 HEAT repeat HEAT_EZ PF13513.6 gi|73669332|ref|YP_305347.1| - 1.3e-54 182.0 13.6 0.0045 17.5 0.1 13.5 13 0 0 13 13 13 12 HEAT-like repeat Arm PF00514.23 gi|73669332|ref|YP_305347.1| - 1e-41 139.7 19.2 0.00021 21.2 0.0 12.3 12 1 1 13 13 13 9 Armadillo/beta-catenin-like repeat Vac14_Fab1_bd PF12755.7 gi|73669332|ref|YP_305347.1| - 7.1e-32 109.9 0.1 0.22 12.1 0.0 14.3 2 1 12 14 14 14 6 Vacuolar 14 Fab1-binding region Cnd1 PF12717.7 gi|73669332|ref|YP_305347.1| - 7.7e-22 78.1 22.1 0.00041 20.4 0.3 9.7 2 1 9 11 11 11 10 non-SMC mitotic condensation complex subunit 1 Aconitase_B_N PF11791.8 gi|73669332|ref|YP_305347.1| - 1.8e-19 70.4 15.7 0.0057 16.7 0.0 9.3 1 1 11 12 12 12 8 Aconitate B N-terminal domain Adaptin_N PF01602.20 gi|73669332|ref|YP_305347.1| - 7.9e-17 61.0 14.1 1.8e-05 23.5 0.4 5.6 1 1 3 4 4 4 4 Adaptin N terminal region RasGEF_N_2 PF14663.6 gi|73669332|ref|YP_305347.1| - 2.4e-15 56.8 15.5 1.4 9.3 0.0 11.5 1 1 8 11 11 11 3 Rapamycin-insensitive companion of mTOR RasGEF_N domain RTP1_C1 PF10363.9 gi|73669332|ref|YP_305347.1| - 5.9e-12 45.8 6.5 0.0011 19.1 0.2 5.4 2 1 3 5 5 4 3 Required for nuclear transport of RNA pol II C-terminus 1 NACHT PF05729.12 gi|73669332|ref|YP_305347.1| - 1.4e-10 41.3 0.0 4.6e-10 39.7 0.0 2.0 1 0 0 1 1 1 1 NACHT domain zf-CCCH_6 PF18585.1 gi|73669332|ref|YP_305347.1| - 4.3e-08 32.9 16.8 35 4.4 0.0 11.7 1 1 11 12 12 12 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 RICTOR_M PF14666.6 gi|73669332|ref|YP_305347.1| - 1.4e-05 24.8 0.7 63 3.4 0.0 8.2 8 3 2 10 10 8 0 Rapamycin-insensitive companion of mTOR, middle domain CLASP_N PF12348.8 gi|73669332|ref|YP_305347.1| - 0.00037 20.1 10.3 19 4.8 6.6 6.1 2 1 1 3 3 3 0 CLASP N terminal AAA_22 PF13401.6 gi|73669332|ref|YP_305347.1| - 0.00041 20.6 0.0 0.0028 17.9 0.0 2.5 1 0 0 1 1 1 1 AAA domain DUF4042 PF13251.6 gi|73669332|ref|YP_305347.1| - 0.0013 18.4 1.7 6.3 6.4 0.0 4.9 3 2 2 5 5 5 1 Domain of unknown function (DUF4042) DUF2019 PF09450.10 gi|73669332|ref|YP_305347.1| - 0.037 14.0 3.9 5.3 7.0 0.1 3.9 3 1 1 4 4 4 0 Domain of unknown function (DUF2019) DUF948 PF06103.11 gi|73669332|ref|YP_305347.1| - 0.064 13.5 0.6 0.51 10.6 0.6 2.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) AAA_16 PF13191.6 gi|73669332|ref|YP_305347.1| - 0.11 12.9 0.9 0.54 10.6 0.0 2.7 2 1 0 2 2 2 0 AAA ATPase domain ABC_tran PF00005.27 gi|73669332|ref|YP_305347.1| - 0.13 12.7 0.0 0.13 12.7 0.0 3.2 3 2 0 3 3 2 0 ABC transporter AAA_29 PF13555.6 gi|73669332|ref|YP_305347.1| - 0.17 11.6 0.0 0.4 10.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain NLRC4_HD2 PF17776.1 gi|73669332|ref|YP_305347.1| - 0.48 11.0 3.7 1.4 9.4 0.9 3.4 2 0 0 2 2 2 0 NLRC4 helical domain HD2 CbiA PF01656.23 gi|73669332|ref|YP_305347.1| - 0.5 10.4 3.3 1.7 8.7 0.0 3.5 4 1 0 4 4 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain CHIP_TPR_N PF18391.1 gi|73669332|ref|YP_305347.1| - 0.87 10.4 8.6 0.93 10.3 0.9 4.0 1 1 1 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain DUF3549 PF12069.8 gi|73669332|ref|YP_305347.1| - 0.98 8.4 16.1 2 7.4 1.2 3.9 1 1 2 4 4 4 0 Protein of unknown function (DUF3549) Cupin_2 PF07883.11 gi|73669333|ref|YP_305348.1| - 5.8e-15 54.8 0.0 9e-15 54.2 0.0 1.3 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.18 gi|73669333|ref|YP_305348.1| - 7.7e-06 25.9 0.0 9.2e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 gi|73669333|ref|YP_305348.1| - 1.2e-05 25.2 0.0 1.6e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 gi|73669333|ref|YP_305348.1| - 0.00072 19.2 0.0 0.00091 18.9 0.0 1.2 1 0 0 1 1 1 1 Cupin Auxin_BP PF02041.16 gi|73669333|ref|YP_305348.1| - 0.018 14.7 0.1 0.028 14.1 0.1 1.4 1 1 0 1 1 1 0 Auxin binding protein GPI PF06560.11 gi|73669333|ref|YP_305348.1| - 0.11 11.8 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) DUF2956 PF11169.8 gi|73669334|ref|YP_305349.1| - 0.0094 16.1 0.1 0.011 15.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2956) Orf78 PF06024.12 gi|73669334|ref|YP_305349.1| - 0.045 14.1 0.9 0.048 14.0 0.2 1.4 1 1 0 1 1 1 0 Orf78 (ac78) pRN1_helical PF13010.6 gi|73669335|ref|YP_305350.1| - 0.016 15.2 0.0 0.023 14.7 0.0 1.2 1 0 0 1 1 1 0 Primase helical domain CbiA PF01656.23 gi|73669336|ref|YP_305351.1| - 2.2e-18 66.5 0.0 2.7e-18 66.2 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|73669336|ref|YP_305351.1| - 2.2e-11 43.7 1.2 1.6e-05 24.5 0.3 2.6 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4 PF00037.27 gi|73669336|ref|YP_305351.1| - 2.1e-10 40.0 14.7 1.2e-05 24.9 2.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_NifH PF00142.18 gi|73669336|ref|YP_305351.1| - 7.7e-10 38.7 1.9 1.5e-06 27.8 0.1 2.7 3 0 0 3 3 3 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Fer4_21 PF14697.6 gi|73669336|ref|YP_305351.1| - 3.6e-09 36.6 9.0 9.7e-09 35.2 9.0 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_31 PF13614.6 gi|73669336|ref|YP_305351.1| - 2e-08 34.3 0.0 0.00073 19.5 0.0 2.3 2 0 0 2 2 2 2 AAA domain Fer4_7 PF12838.7 gi|73669336|ref|YP_305351.1| - 2.4e-06 28.0 10.0 0.0009 19.8 12.4 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain RsgA_GTPase PF03193.16 gi|73669336|ref|YP_305351.1| - 2.5e-06 27.5 0.6 0.029 14.3 0.1 3.1 2 1 1 3 3 3 2 RsgA GTPase Fer4_10 PF13237.6 gi|73669336|ref|YP_305351.1| - 3.7e-06 27.0 11.4 4.6e-05 23.4 12.4 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73669336|ref|YP_305351.1| - 4.7e-06 26.4 12.8 0.001 19.0 1.6 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73669336|ref|YP_305351.1| - 1.5e-05 25.8 8.9 0.012 16.5 1.5 2.8 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|73669336|ref|YP_305351.1| - 2.6e-05 24.7 2.2 0.13 12.8 0.2 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73669336|ref|YP_305351.1| - 0.00013 22.1 12.3 0.014 15.5 13.5 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73669336|ref|YP_305351.1| - 0.00023 21.1 14.3 0.01 15.9 2.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73669336|ref|YP_305351.1| - 0.00025 21.3 12.9 0.084 13.4 3.6 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain CBP_BcsQ PF06564.12 gi|73669336|ref|YP_305351.1| - 0.0008 19.0 0.0 0.4 10.1 0.0 2.2 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ Fer4_22 PF17179.4 gi|73669336|ref|YP_305351.1| - 0.00096 20.0 3.1 1.7 9.6 0.0 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain AAA_16 PF13191.6 gi|73669336|ref|YP_305351.1| - 0.0015 18.9 0.0 0.01 16.2 0.0 2.2 2 1 1 3 3 3 1 AAA ATPase domain AAA_22 PF13401.6 gi|73669336|ref|YP_305351.1| - 0.0044 17.3 0.0 0.26 11.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain FTHFS PF01268.19 gi|73669336|ref|YP_305351.1| - 0.0069 14.6 0.1 0.013 13.8 0.1 1.5 1 1 0 1 1 1 1 Formate--tetrahydrofolate ligase PhoH PF02562.16 gi|73669336|ref|YP_305351.1| - 0.007 15.8 1.9 0.5 9.8 0.8 2.2 2 0 0 2 2 2 1 PhoH-like protein AAA_15 PF13175.6 gi|73669336|ref|YP_305351.1| - 0.0087 15.8 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain GTP_EFTU PF00009.27 gi|73669336|ref|YP_305351.1| - 0.0098 15.5 0.2 0.18 11.3 0.1 2.2 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain AAA_30 PF13604.6 gi|73669336|ref|YP_305351.1| - 0.012 15.3 1.0 0.21 11.3 0.3 2.4 2 1 1 3 3 3 0 AAA domain RuvB_N PF05496.12 gi|73669336|ref|YP_305351.1| - 0.012 15.3 0.1 0.48 10.2 0.0 2.3 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain IstB_IS21 PF01695.17 gi|73669336|ref|YP_305351.1| - 0.015 15.1 0.0 0.67 9.7 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_24 PF13479.6 gi|73669336|ref|YP_305351.1| - 0.02 14.6 0.0 0.038 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|73669336|ref|YP_305351.1| - 0.023 15.2 0.1 0.23 12.0 0.0 2.4 3 0 0 3 3 2 0 ABC transporter DnaB_C PF03796.15 gi|73669336|ref|YP_305351.1| - 0.026 13.9 0.1 7.9 5.7 0.0 2.4 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain ArsA_ATPase PF02374.15 gi|73669336|ref|YP_305351.1| - 0.026 13.7 1.2 0.026 13.7 1.2 2.0 2 1 0 2 2 2 0 Anion-transporting ATPase NACHT PF05729.12 gi|73669336|ref|YP_305351.1| - 0.035 14.0 0.0 0.2 11.6 0.1 2.1 2 0 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 gi|73669336|ref|YP_305351.1| - 0.039 14.5 0.4 1 9.9 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|73669336|ref|YP_305351.1| - 0.08 13.2 0.3 0.22 11.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain Fer4_13 PF13370.6 gi|73669336|ref|YP_305351.1| - 0.092 13.3 11.4 0.36 11.4 1.1 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I AAA_11 PF13086.6 gi|73669336|ref|YP_305351.1| - 0.11 12.2 0.0 15 5.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain Fer4_8 PF13183.6 gi|73669336|ref|YP_305351.1| - 0.18 12.3 12.6 2 8.9 1.8 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain AAA_23 PF13476.6 gi|73669336|ref|YP_305351.1| - 0.19 12.2 1.1 0.42 11.1 1.1 1.5 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 gi|73669336|ref|YP_305351.1| - 0.19 11.0 0.7 0.5 9.7 0.3 1.8 2 0 0 2 2 2 0 KaiC Fer4_3 PF12798.7 gi|73669336|ref|YP_305351.1| - 0.2 12.7 16.0 1.1 10.4 1.8 2.9 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_21 PF13304.6 gi|73669336|ref|YP_305351.1| - 0.2 11.4 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Zeta_toxin PF06414.12 gi|73669336|ref|YP_305351.1| - 0.21 10.8 0.4 6.7 5.9 0.1 2.2 2 0 0 2 2 2 0 Zeta toxin AAA PF00004.29 gi|73669336|ref|YP_305351.1| - 0.23 11.9 1.3 1.7 9.1 0.0 2.4 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|73669336|ref|YP_305351.1| - 0.28 11.2 1.7 5 7.1 0.3 2.7 3 1 0 3 3 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 gi|73669336|ref|YP_305351.1| - 0.61 9.6 2.2 1.1 8.8 1.5 1.7 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|73669336|ref|YP_305351.1| - 0.69 9.7 3.9 0.76 9.6 0.6 2.5 3 0 0 3 3 2 0 P-loop containing region of AAA domain Fer4_15 PF13459.6 gi|73669336|ref|YP_305351.1| - 5.9 7.7 10.9 5.5 7.8 2.0 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain CbiA PF01656.23 gi|73669337|ref|YP_305352.1| - 8.2e-22 77.6 0.0 1.1e-21 77.2 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|73669337|ref|YP_305352.1| - 3.7e-15 56.1 0.1 3.4e-08 33.3 0.0 3.1 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4 PF00037.27 gi|73669337|ref|YP_305352.1| - 2.2e-08 33.6 9.1 1.9e-05 24.2 1.2 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain AAA_31 PF13614.6 gi|73669337|ref|YP_305352.1| - 4.1e-07 30.1 0.0 8.4e-05 22.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain Fer4_6 PF12837.7 gi|73669337|ref|YP_305352.1| - 5.1e-06 26.3 14.9 0.00018 21.5 0.7 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73669337|ref|YP_305352.1| - 3.7e-05 24.6 8.0 0.0011 19.9 0.1 2.9 2 1 1 3 3 3 1 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|73669337|ref|YP_305352.1| - 3.9e-05 24.1 8.2 0.016 15.8 0.1 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain AAA_26 PF13500.6 gi|73669337|ref|YP_305352.1| - 0.00015 21.6 0.2 0.018 14.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain Fer4_21 PF14697.6 gi|73669337|ref|YP_305352.1| - 0.00017 21.6 6.4 0.00017 21.6 6.4 2.1 3 0 0 3 3 1 1 4Fe-4S dicluster domain ArsA_ATPase PF02374.15 gi|73669337|ref|YP_305352.1| - 0.00026 20.3 0.4 0.0007 18.9 0.4 1.7 2 0 0 2 2 2 1 Anion-transporting ATPase Fer4_9 PF13187.6 gi|73669337|ref|YP_305352.1| - 0.0042 17.2 11.4 0.013 15.7 10.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73669337|ref|YP_305352.1| - 0.0051 17.2 5.9 0.33 11.4 0.0 2.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain AAA_25 PF13481.6 gi|73669337|ref|YP_305352.1| - 0.0052 16.4 0.0 0.011 15.4 0.0 1.5 2 0 0 2 2 2 1 AAA domain Fer4_10 PF13237.6 gi|73669337|ref|YP_305352.1| - 0.03 14.4 14.5 0.13 12.4 0.9 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_NifH PF00142.18 gi|73669337|ref|YP_305352.1| - 0.042 13.3 0.0 0.92 8.9 0.0 2.2 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Fer4_15 PF13459.6 gi|73669337|ref|YP_305352.1| - 0.078 13.7 5.8 4.2 8.2 0.1 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain MipZ PF09140.11 gi|73669337|ref|YP_305352.1| - 0.13 11.5 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ Fer4_17 PF13534.6 gi|73669337|ref|YP_305352.1| - 2 9.0 15.2 0.75 10.4 3.1 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73669337|ref|YP_305352.1| - 6 7.6 19.0 4 8.2 5.1 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain Cation_efflux PF01545.21 gi|73669338|ref|YP_305353.1| - 9.8e-39 133.2 18.9 1.2e-38 132.8 18.9 1.1 1 0 0 1 1 1 1 Cation efflux family Nitro_FeMo-Co PF02579.17 gi|73669338|ref|YP_305353.1| - 2.2e-15 56.7 0.0 4.1e-15 55.9 0.0 1.4 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor ZT_dimer PF16916.5 gi|73669338|ref|YP_305353.1| - 8.1e-13 48.3 0.9 1.7e-12 47.3 0.9 1.5 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Nitro_FeMo-Co PF02579.17 gi|73669339|ref|YP_305354.1| - 1.2e-20 73.6 0.2 2.2e-20 72.8 0.0 1.5 2 0 0 2 2 2 1 Dinitrogenase iron-molybdenum cofactor Nitro_FeMo-Co PF02579.17 gi|73669340|ref|YP_305355.1| - 9.2e-23 80.4 0.0 1.2e-22 80.0 0.0 1.2 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor Radical_SAM PF04055.21 gi|73669341|ref|YP_305356.1| - 2.2e-20 73.7 0.1 1.2e-19 71.3 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|73669341|ref|YP_305356.1| - 1.6e-17 63.4 0.1 3.2e-17 62.4 0.1 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|73669341|ref|YP_305356.1| - 0.001 19.0 0.0 0.0021 18.0 0.0 1.6 1 0 0 1 1 1 1 TRAM domain M20_dimer PF07687.14 gi|73669341|ref|YP_305356.1| - 0.12 12.3 0.0 0.25 11.2 0.0 1.5 1 0 0 1 1 1 0 Peptidase dimerisation domain FBPase_glpX PF03320.13 gi|73669342|ref|YP_305357.1| - 2.7e-117 391.0 4.5 3.2e-117 390.8 4.5 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GATase PF00117.28 gi|73669343|ref|YP_305358.1| - 4.5e-13 49.4 0.0 6.1e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|73669343|ref|YP_305358.1| - 2e-05 24.5 0.0 0.0011 18.7 0.0 2.2 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.14 gi|73669343|ref|YP_305358.1| - 0.0028 17.3 0.0 0.0058 16.3 0.0 1.6 1 1 1 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|73669343|ref|YP_305358.1| - 0.011 15.5 0.0 0.016 15.0 0.0 1.2 1 0 0 1 1 1 0 DJ-1/PfpI family CGI-121 PF08617.10 gi|73669344|ref|YP_305359.1| - 1.5e-08 34.9 0.0 1.8e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 Ni_hydr_CYTB PF01292.20 gi|73669345|ref|YP_305360.1| - 3.3e-06 26.8 22.4 2.7e-05 23.8 22.4 2.0 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 gi|73669345|ref|YP_305360.1| - 7.1e-05 23.3 25.1 0.0038 17.7 10.4 2.8 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) DUF3481 PF11980.8 gi|73669345|ref|YP_305360.1| - 0.034 13.8 0.1 0.072 12.8 0.1 1.5 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein DUF4134 PF13572.6 gi|73669345|ref|YP_305360.1| - 0.065 13.5 1.0 1.4 9.3 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4134) PsbN PF02468.15 gi|73669345|ref|YP_305360.1| - 0.25 11.2 6.9 3.9 7.4 0.1 2.8 3 0 0 3 3 3 0 Photosystem II reaction centre N protein (psbN) Pox_A14 PF05767.12 gi|73669345|ref|YP_305360.1| - 6.1 7.1 7.6 4.1 7.6 0.4 2.9 3 0 0 3 3 3 0 Poxvirus virion envelope protein A14 NiFeSe_Hases PF00374.19 gi|73669346|ref|YP_305361.1| - 4.6e-83 279.8 0.0 1.4e-56 192.5 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase SYCP2_ARLD PF18581.1 gi|73669346|ref|YP_305361.1| - 0.086 12.8 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Synaptonemal complex 2 armadillo-repeat-like domain NiFe_hyd_SSU_C PF14720.6 gi|73669347|ref|YP_305362.1| - 2.2e-29 101.6 3.3 3.8e-29 100.9 3.3 1.3 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal Oxidored_q6 PF01058.22 gi|73669347|ref|YP_305362.1| - 1.3e-25 89.8 0.0 1.9e-25 89.2 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit TAT_signal PF10518.9 gi|73669347|ref|YP_305362.1| - 0.041 13.7 0.2 0.041 13.7 0.2 2.7 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Zn_ribbon_17 PF17120.5 gi|73669347|ref|YP_305362.1| - 8.4 6.1 7.0 36 4.1 0.1 2.5 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type PG_binding_1 PF01471.18 gi|73669348|ref|YP_305363.1| - 1.8e-12 47.3 0.0 3e-12 46.6 0.0 1.4 1 0 0 1 1 1 1 Putative peptidoglycan binding domain PG_binding_3 PF09374.10 gi|73669348|ref|YP_305363.1| - 0.014 15.6 0.1 5.9 7.2 0.0 2.3 1 1 1 2 2 2 0 Predicted Peptidoglycan domain HycI PF01750.18 gi|73669350|ref|YP_305365.1| - 7.3e-19 67.9 2.5 8.7e-19 67.6 2.5 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease Ni_hydr_CYTB PF01292.20 gi|73669351|ref|YP_305366.1| - 0.00046 19.8 22.8 0.0014 18.3 22.8 1.7 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 gi|73669351|ref|YP_305366.1| - 0.005 17.3 23.6 0.2 12.3 11.6 3.0 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) PepSY_TM PF03929.16 gi|73669351|ref|YP_305366.1| - 3.3 7.3 8.0 8.1 6.0 0.3 2.4 2 1 0 2 2 2 0 PepSY-associated TM region NiFeSe_Hases PF00374.19 gi|73669352|ref|YP_305367.1| - 4.2e-85 286.6 0.0 1.1e-55 189.5 0.0 3.0 3 0 0 3 3 3 3 Nickel-dependent hydrogenase NLRC4_HD PF17889.1 gi|73669352|ref|YP_305367.1| - 0.13 12.6 0.0 0.25 11.7 0.0 1.4 1 0 0 1 1 1 0 NLRC4 helical domain Oxidored_q6 PF01058.22 gi|73669353|ref|YP_305368.1| - 5.4e-33 113.6 2.1 1e-32 112.7 0.0 2.0 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.6 gi|73669353|ref|YP_305368.1| - 5.2e-30 103.6 4.8 9.5e-29 99.6 3.0 2.4 2 0 0 2 2 2 1 NiFe/NiFeSe hydrogenase small subunit C-terminal TAT_signal PF10518.9 gi|73669353|ref|YP_305368.1| - 2.4e-05 24.0 0.9 2.4e-05 24.0 0.9 3.4 3 0 0 3 3 3 1 TAT (twin-arginine translocation) pathway signal sequence HupF_HypC PF01455.18 gi|73669354|ref|YP_305369.1| - 1.1e-20 73.5 0.3 1.4e-20 73.2 0.3 1.1 1 0 0 1 1 1 1 HupF/HypC family HypD PF01924.16 gi|73669355|ref|YP_305370.1| - 8.6e-136 452.6 0.0 1e-135 452.4 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family HypA PF01155.19 gi|73669356|ref|YP_305371.1| - 3.8e-28 97.7 2.8 5.3e-28 97.3 2.8 1.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RbpA PF13397.6 gi|73669356|ref|YP_305371.1| - 0.12 13.0 0.2 15 6.3 0.0 2.2 1 1 1 2 2 2 0 RNA polymerase-binding protein cobW PF02492.19 gi|73669357|ref|YP_305372.1| - 1.5e-26 93.1 1.6 1.9e-26 92.7 1.6 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|73669357|ref|YP_305372.1| - 9.2e-08 31.4 0.7 0.0011 18.0 0.3 2.1 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 gi|73669357|ref|YP_305372.1| - 0.00095 19.1 0.2 0.0021 17.9 0.2 1.7 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 gi|73669357|ref|YP_305372.1| - 0.0011 18.9 0.0 0.0014 18.6 0.0 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|73669357|ref|YP_305372.1| - 0.0016 18.9 0.0 0.0021 18.5 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|73669357|ref|YP_305372.1| - 0.0017 18.6 0.0 0.0044 17.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|73669357|ref|YP_305372.1| - 0.0027 17.4 0.1 0.0048 16.6 0.1 1.4 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 gi|73669357|ref|YP_305372.1| - 0.0032 17.4 0.8 0.027 14.4 0.5 2.5 1 1 0 1 1 1 1 NTPase NB-ARC PF00931.22 gi|73669357|ref|YP_305372.1| - 0.0034 16.6 0.1 0.0053 16.0 0.1 1.2 1 0 0 1 1 1 1 NB-ARC domain AAA_18 PF13238.6 gi|73669357|ref|YP_305372.1| - 0.0042 17.6 0.1 0.0081 16.7 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|73669357|ref|YP_305372.1| - 0.0056 17.1 0.1 0.047 14.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain IIGP PF05049.13 gi|73669357|ref|YP_305372.1| - 0.012 14.7 0.2 0.023 13.8 0.0 1.4 2 0 0 2 2 2 0 Interferon-inducible GTPase (IIGP) Zeta_toxin PF06414.12 gi|73669357|ref|YP_305372.1| - 0.013 14.8 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin TsaE PF02367.17 gi|73669357|ref|YP_305372.1| - 0.016 15.2 0.0 0.031 14.3 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Pox_A32 PF04665.12 gi|73669357|ref|YP_305372.1| - 0.021 14.3 0.0 0.039 13.4 0.0 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_14 PF13173.6 gi|73669357|ref|YP_305372.1| - 0.025 14.6 0.0 0.045 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|73669357|ref|YP_305372.1| - 0.026 13.6 0.1 0.043 12.9 0.1 1.4 1 1 0 1 1 1 0 Type II/IV secretion system protein TrwB_AAD_bind PF10412.9 gi|73669357|ref|YP_305372.1| - 0.028 13.3 0.0 0.042 12.7 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain GTP_EFTU PF00009.27 gi|73669357|ref|YP_305372.1| - 0.036 13.6 0.1 0.25 10.8 0.0 2.0 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_33 PF13671.6 gi|73669357|ref|YP_305372.1| - 0.045 13.9 0.0 0.075 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|73669357|ref|YP_305372.1| - 0.052 13.5 0.3 1.8 8.5 0.1 2.3 2 1 0 2 2 2 0 RsgA GTPase AAA_7 PF12775.7 gi|73669357|ref|YP_305372.1| - 0.062 12.8 0.0 0.089 12.3 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ATP_bind_1 PF03029.17 gi|73669357|ref|YP_305372.1| - 0.067 13.0 0.1 0.17 11.6 0.0 1.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein ILEI PF15711.5 gi|73669357|ref|YP_305372.1| - 0.096 13.2 0.2 0.39 11.2 0.0 2.0 2 0 0 2 2 2 0 Interleukin-like EMT inducer AAA_30 PF13604.6 gi|73669357|ref|YP_305372.1| - 0.1 12.3 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 gi|73669357|ref|YP_305372.1| - 0.12 12.4 0.2 0.28 11.2 0.2 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_29 PF13555.6 gi|73669357|ref|YP_305372.1| - 0.13 12.0 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|73669357|ref|YP_305372.1| - 0.39 10.8 2.0 1.3 9.1 0.3 2.5 1 1 1 2 2 2 0 50S ribosome-binding GTPase AIRS_C PF02769.22 gi|73669358|ref|YP_305373.1| - 5.2e-32 111.1 0.0 8.3e-32 110.5 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|73669358|ref|YP_305373.1| - 5.4e-19 68.6 0.3 1.1e-18 67.6 0.3 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Orf78 PF06024.12 gi|73669359|ref|YP_305374.1| - 0.047 14.0 0.6 6 7.2 0.0 2.3 2 0 0 2 2 2 0 Orf78 (ac78) DUF1422 PF07226.11 gi|73669359|ref|YP_305374.1| - 0.061 13.3 3.0 0.24 11.4 1.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1422) Hexapep PF00132.24 gi|73669360|ref|YP_305375.1| - 1.7e-17 62.4 12.7 1.3e-09 37.4 1.9 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73669360|ref|YP_305375.1| - 3.8e-12 45.7 7.0 1e-06 28.4 2.6 2.6 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|73669360|ref|YP_305375.1| - 0.026 13.5 0.2 0.052 12.5 0.2 1.5 1 1 0 1 1 1 0 L-fucokinase DUF3721 PF12518.8 gi|73669361|ref|YP_305376.1| - 0.038 13.8 0.8 0.061 13.2 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function Nrap_D6 PF17407.2 gi|73669362|ref|YP_305377.1| - 0.19 12.0 1.8 9.5 6.4 0.1 3.7 1 1 1 3 3 3 0 Nrap protein domain 6 FpoO PF10621.9 gi|73669362|ref|YP_305377.1| - 2.7 8.4 7.4 1.2e+02 3.1 0.0 5.5 1 1 4 7 7 7 0 F420H2 dehydrogenase subunit FpoO UPF0014 PF03649.13 gi|73669363|ref|YP_305378.1| - 7.2e-74 248.2 13.0 8.1e-74 248.0 13.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) UPF0139 PF03669.13 gi|73669363|ref|YP_305378.1| - 0.029 14.2 0.4 0.064 13.1 0.4 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) TspO_MBR PF03073.15 gi|73669363|ref|YP_305378.1| - 0.32 11.0 9.6 0.8 9.8 9.6 1.6 1 0 0 1 1 1 0 TspO/MBR family DUF3754 PF12576.8 gi|73669363|ref|YP_305378.1| - 0.51 10.3 3.7 0.53 10.2 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3754) Thioredoxin PF00085.20 gi|73669364|ref|YP_305379.1| - 1.7e-21 76.1 0.1 2e-21 75.9 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|73669364|ref|YP_305379.1| - 1.6e-10 41.4 0.4 4.3e-10 40.0 0.4 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 gi|73669364|ref|YP_305379.1| - 3.5e-06 27.1 0.0 4.9e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like TraF PF13728.6 gi|73669364|ref|YP_305379.1| - 8.6e-05 22.5 0.0 0.00011 22.1 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_3 PF13192.6 gi|73669364|ref|YP_305379.1| - 0.00011 22.2 0.0 0.00017 21.6 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain OST3_OST6 PF04756.13 gi|73669364|ref|YP_305379.1| - 0.00042 19.8 0.0 0.00044 19.7 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 gi|73669364|ref|YP_305379.1| - 0.00063 19.7 0.0 0.0008 19.3 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|73669364|ref|YP_305379.1| - 0.00081 19.1 0.0 0.00097 18.9 0.0 1.2 1 0 0 1 1 1 1 Redoxin Thioredoxin_4 PF13462.6 gi|73669364|ref|YP_305379.1| - 0.0022 18.2 1.1 0.07 13.3 0.5 2.1 1 1 0 2 2 2 1 Thioredoxin Glutaredoxin PF00462.24 gi|73669364|ref|YP_305379.1| - 0.0037 17.5 0.1 0.0056 16.9 0.1 1.4 1 0 0 1 1 1 1 Glutaredoxin DSBA PF01323.20 gi|73669364|ref|YP_305379.1| - 0.0042 16.9 1.5 0.1 12.3 0.2 2.1 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_5 PF13743.6 gi|73669364|ref|YP_305379.1| - 0.029 14.1 0.3 0.24 11.1 0.2 1.9 1 1 0 2 2 2 0 Thioredoxin DIM1 PF02966.16 gi|73669364|ref|YP_305379.1| - 0.033 14.0 0.0 0.039 13.7 0.0 1.1 1 0 0 1 1 1 0 Mitosis protein DIM1 Thioredoxin_8 PF13905.6 gi|73669364|ref|YP_305379.1| - 0.034 14.5 0.0 0.09 13.1 0.0 1.7 1 1 1 2 2 2 0 Thioredoxin-like Zn_Tnp_IS1595 PF12760.7 gi|73669364|ref|YP_305379.1| - 0.051 13.6 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain T4_deiodinase PF00837.17 gi|73669364|ref|YP_305379.1| - 0.16 11.3 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Iodothyronine deiodinase A2L_zn_ribbon PF08792.10 gi|73669365|ref|YP_305380.1| - 0.026 14.2 7.5 2.6 7.9 0.1 3.8 4 0 0 4 4 4 0 A2L zinc ribbon domain zf-RING_5 PF14634.6 gi|73669365|ref|YP_305380.1| - 0.036 14.0 6.7 2.5 8.1 0.5 3.3 3 0 0 3 3 3 0 zinc-RING finger domain zf_UBZ PF18439.1 gi|73669365|ref|YP_305380.1| - 0.042 13.4 5.1 0.079 12.6 0.2 3.1 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger Sgf11 PF08209.11 gi|73669365|ref|YP_305380.1| - 0.055 13.0 1.6 7.4 6.2 0.1 2.5 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-NADH-PPase PF09297.11 gi|73669365|ref|YP_305380.1| - 0.15 11.8 0.0 0.15 11.8 0.0 2.7 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain DZR PF12773.7 gi|73669365|ref|YP_305380.1| - 0.24 11.4 7.0 0.9 9.6 1.9 2.9 1 1 1 2 2 2 0 Double zinc ribbon DUF2116 PF09889.9 gi|73669365|ref|YP_305380.1| - 0.35 10.9 3.3 7.7 6.6 0.0 2.6 3 0 0 3 3 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) zinc-ribbons_6 PF07191.12 gi|73669365|ref|YP_305380.1| - 0.75 9.8 5.3 1.2 9.2 1.6 2.6 2 1 0 2 2 2 0 zinc-ribbons zf-dskA_traR PF01258.17 gi|73669365|ref|YP_305380.1| - 1.1 9.3 0.1 1.1 9.3 0.1 3.6 4 0 0 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger zf-CCHC_2 PF13696.6 gi|73669365|ref|YP_305380.1| - 1.1 9.2 0.1 1.1 9.2 0.1 2.8 3 0 0 3 3 3 0 Zinc knuckle DUF2039 PF10217.9 gi|73669365|ref|YP_305380.1| - 1.6 9.1 6.2 5.1 7.5 3.1 3.0 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2039) FYVE PF01363.21 gi|73669365|ref|YP_305380.1| - 2.2 8.5 7.5 74 3.6 7.5 2.6 1 1 0 1 1 1 0 FYVE zinc finger zf_C2H2_13 PF18508.1 gi|73669365|ref|YP_305380.1| - 2.2 7.9 9.5 1.1 8.9 0.9 2.9 3 0 0 3 3 3 0 Zinc finger domain zf-ribbon_3 PF13248.6 gi|73669365|ref|YP_305380.1| - 2.4 7.7 9.1 2.7 7.5 0.0 3.2 4 0 0 4 4 4 0 zinc-ribbon domain zf-RING_4 PF14570.6 gi|73669365|ref|YP_305380.1| - 4.5 7.1 8.6 4.2 7.2 0.1 2.6 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain PIN_5 PF08745.11 gi|73669366|ref|YP_305381.1| - 1.7e-91 305.2 0.0 2e-91 305.0 0.0 1.0 1 0 0 1 1 1 1 PINc domain ribonuclease AdoMet_Synthase PF01941.19 gi|73669367|ref|YP_305382.1| - 1.1e-160 534.8 0.0 1.2e-160 534.6 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) UbiA PF01040.18 gi|73669368|ref|YP_305383.1| - 8.3e-45 153.0 14.3 1.1e-44 152.7 14.3 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family Pmp3 PF01679.17 gi|73669369|ref|YP_305384.1| - 0.48 10.7 5.0 0.091 13.0 1.0 1.8 2 0 0 2 2 2 0 Proteolipid membrane potential modulator NadA PF02445.16 gi|73669370|ref|YP_305385.1| - 1.8e-117 391.8 5.8 2e-117 391.6 5.8 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein Sigma70_r4 PF04545.16 gi|73669370|ref|YP_305385.1| - 0.12 11.9 0.1 0.96 9.0 0.0 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 DUF108 PF01958.18 gi|73669371|ref|YP_305386.1| - 2.8e-38 130.2 0.2 4.7e-38 129.4 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.16 gi|73669371|ref|YP_305386.1| - 2.2e-24 86.4 0.0 3.6e-24 85.7 0.0 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|73669371|ref|YP_305386.1| - 0.00027 21.3 0.0 0.00039 20.8 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|73669371|ref|YP_305386.1| - 0.00031 20.8 0.0 0.00058 20.0 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 gi|73669371|ref|YP_305386.1| - 0.0035 18.2 0.0 0.0064 17.3 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold F420_oxidored PF03807.17 gi|73669371|ref|YP_305386.1| - 0.03 14.9 0.1 0.063 13.9 0.1 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|73669371|ref|YP_305386.1| - 0.039 14.1 0.0 0.058 13.6 0.0 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase RuvC PF02075.17 gi|73669371|ref|YP_305386.1| - 0.096 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Crossover junction endodeoxyribonuclease RuvC 2-Hacid_dh_C PF02826.19 gi|73669371|ref|YP_305386.1| - 0.13 11.7 0.0 0.2 11.0 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain QRPTase_C PF01729.19 gi|73669372|ref|YP_305387.1| - 6.4e-57 192.0 1.3 7.9e-57 191.7 1.3 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|73669372|ref|YP_305387.1| - 8.1e-24 83.5 0.0 1.8e-23 82.4 0.0 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.19 gi|73669372|ref|YP_305387.1| - 0.022 14.1 0.2 0.057 12.8 0.1 1.7 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family Peripla_BP_2 PF01497.18 gi|73669373|ref|YP_305388.1| - 2.4e-21 76.4 0.0 4.2e-21 75.6 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_2 PF01497.18 gi|73669374|ref|YP_305389.1| - 7e-21 74.9 0.1 1.2e-20 74.1 0.1 1.4 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_2 PF01497.18 gi|73669375|ref|YP_305390.1| - 8.5e-24 84.4 0.2 1.6e-23 83.5 0.2 1.4 2 0 0 2 2 2 1 Periplasmic binding protein Pal1 PF08316.11 gi|73669375|ref|YP_305390.1| - 0.037 14.8 1.3 0.05 14.4 0.0 1.8 3 0 0 3 3 3 0 Pal1 cell morphology protein DUF5061 PF16587.5 gi|73669375|ref|YP_305390.1| - 0.12 12.5 0.3 0.22 11.6 0.3 1.4 1 0 0 1 1 1 0 17 kDa common-antigen outer membrane protein FecCD PF01032.18 gi|73669376|ref|YP_305391.1| - 6.3e-89 298.0 35.1 7.7e-89 297.8 35.1 1.0 1 0 0 1 1 1 1 FecCD transport family Herpes_US9 PF06072.11 gi|73669376|ref|YP_305391.1| - 0.25 11.2 5.8 1.2 9.1 1.4 3.0 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 ABC_tran PF00005.27 gi|73669377|ref|YP_305392.1| - 6.2e-30 104.5 0.0 8.6e-30 104.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669377|ref|YP_305392.1| - 5.7e-10 39.5 3.1 0.00041 20.2 0.2 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|73669377|ref|YP_305392.1| - 7.4e-06 26.5 0.1 2.9e-05 24.5 0.0 1.9 1 1 1 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|73669377|ref|YP_305392.1| - 0.00011 22.8 0.1 0.00018 22.1 0.1 1.3 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|73669377|ref|YP_305392.1| - 0.00017 21.1 0.4 0.49 9.8 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73669377|ref|YP_305392.1| - 0.00022 20.9 0.0 0.00054 19.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|73669377|ref|YP_305392.1| - 0.00084 19.3 0.0 0.0015 18.5 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase ABC_ATPase PF09818.9 gi|73669377|ref|YP_305392.1| - 0.00096 18.1 0.1 0.56 8.9 0.0 2.8 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_30 PF13604.6 gi|73669377|ref|YP_305392.1| - 0.0018 18.0 0.1 0.0042 16.8 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|73669377|ref|YP_305392.1| - 0.0032 17.9 0.4 0.034 14.6 0.4 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|73669377|ref|YP_305392.1| - 0.0033 17.2 0.0 0.0075 16.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|73669377|ref|YP_305392.1| - 0.0076 16.5 0.9 0.035 14.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|73669377|ref|YP_305392.1| - 0.012 14.9 0.6 0.096 11.9 0.0 2.2 2 1 0 2 2 2 0 NB-ARC domain AAA_14 PF13173.6 gi|73669377|ref|YP_305392.1| - 0.013 15.6 0.2 0.095 12.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|73669377|ref|YP_305392.1| - 0.016 15.1 0.3 0.037 14.0 0.1 1.6 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_33 PF13671.6 gi|73669377|ref|YP_305392.1| - 0.016 15.3 0.0 0.088 13.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|73669377|ref|YP_305392.1| - 0.018 14.7 0.0 0.033 13.8 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ATPase_2 PF01637.18 gi|73669377|ref|YP_305392.1| - 0.021 14.7 0.1 0.043 13.7 0.0 1.5 2 0 0 2 2 1 0 ATPase domain predominantly from Archaea AAA_13 PF13166.6 gi|73669377|ref|YP_305392.1| - 0.022 13.4 0.3 2.7 6.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|73669377|ref|YP_305392.1| - 0.026 15.1 0.3 0.062 13.8 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|73669377|ref|YP_305392.1| - 0.037 13.7 0.0 0.058 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|73669377|ref|YP_305392.1| - 0.04 13.8 0.5 0.086 12.8 0.1 1.6 2 0 0 2 2 2 0 NACHT domain IstB_IS21 PF01695.17 gi|73669377|ref|YP_305392.1| - 0.075 12.8 0.2 0.3 10.8 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_19 PF13245.6 gi|73669377|ref|YP_305392.1| - 0.085 13.2 2.7 1.1 9.6 2.7 2.3 1 1 0 1 1 1 0 AAA domain PIF1 PF05970.14 gi|73669377|ref|YP_305392.1| - 0.091 11.9 0.1 0.24 10.5 0.0 1.6 2 0 0 2 2 2 0 PIF1-like helicase Mg_chelatase PF01078.21 gi|73669377|ref|YP_305392.1| - 0.12 11.8 0.0 0.22 10.9 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NTPase_1 PF03266.15 gi|73669377|ref|YP_305392.1| - 0.12 12.3 2.2 0.18 11.7 0.2 2.1 2 1 0 2 2 2 0 NTPase AAA_5 PF07728.14 gi|73669377|ref|YP_305392.1| - 0.13 12.3 0.7 1.1 9.2 0.1 2.5 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.17 gi|73669377|ref|YP_305392.1| - 0.13 12.0 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_27 PF13514.6 gi|73669377|ref|YP_305392.1| - 0.13 11.8 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|73669377|ref|YP_305392.1| - 0.14 12.4 0.1 0.3 11.3 0.1 1.5 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 gi|73669377|ref|YP_305392.1| - 0.15 11.9 0.2 0.38 10.6 0.1 1.7 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B SbcCD_C PF13558.6 gi|73669377|ref|YP_305392.1| - 0.18 12.0 0.1 1.6 9.0 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TniB PF05621.11 gi|73669377|ref|YP_305392.1| - 0.25 10.7 2.6 2.1 7.7 0.7 2.2 2 1 0 2 2 2 0 Bacterial TniB protein Ribosomal_S13_N PF08069.12 gi|73669378|ref|YP_305393.1| - 3e-25 88.0 0.3 7.4e-25 86.8 0.2 1.7 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|73669378|ref|YP_305393.1| - 1.7e-15 57.0 1.2 2.3e-15 56.5 1.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 Y_Y_Y PF07495.13 gi|73669380|ref|YP_305395.1| - 0.07 13.1 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Y_Y_Y domain Pentapeptide_2 PF01469.18 gi|73669381|ref|YP_305396.1| - 0.0026 17.6 10.1 0.0043 16.9 10.1 1.3 1 0 0 1 1 1 1 Pentapeptide repeats (8 copies) ABC1 PF03109.16 gi|73669383|ref|YP_305398.1| - 3.6e-27 94.9 0.0 7.8e-27 93.8 0.0 1.6 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.22 gi|73669383|ref|YP_305398.1| - 1.8e-07 31.0 0.0 5e-07 29.5 0.0 1.7 2 0 0 2 2 2 1 RIO1 family Pkinase PF00069.25 gi|73669383|ref|YP_305398.1| - 3.1e-05 23.5 0.1 0.0053 16.2 0.1 2.3 2 0 0 2 2 2 2 Protein kinase domain APH PF01636.23 gi|73669383|ref|YP_305398.1| - 0.0021 18.0 0.1 0.012 15.5 0.3 2.0 2 0 0 2 2 2 1 Phosphotransferase enzyme family WaaY PF06176.11 gi|73669383|ref|YP_305398.1| - 0.0048 16.6 0.1 0.013 15.2 0.1 1.7 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) DUF4752 PF15944.5 gi|73669383|ref|YP_305398.1| - 0.15 12.1 0.0 0.55 10.3 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) TauE PF01925.19 gi|73669384|ref|YP_305399.1| - 6.9e-35 120.8 29.4 8.3e-35 120.5 29.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE UPF0016 PF01169.19 gi|73669384|ref|YP_305399.1| - 0.12 12.8 0.5 0.12 12.8 0.5 3.4 3 1 0 3 3 3 0 Uncharacterized protein family UPF0016 OppC_N PF12911.7 gi|73669385|ref|YP_305400.1| - 0.044 13.8 0.1 0.086 12.8 0.1 1.4 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C SHOCT PF09851.9 gi|73669386|ref|YP_305401.1| - 1.9e-12 46.5 2.9 2.4e-12 46.2 2.9 1.2 1 0 0 1 1 1 1 Short C-terminal domain OAD_gamma PF04277.13 gi|73669386|ref|YP_305401.1| - 0.047 14.3 0.0 0.056 14.0 0.0 1.1 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain VbhA PF18495.1 gi|73669386|ref|YP_305401.1| - 0.081 12.8 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Antitoxin VbhA KdgT PF03812.13 gi|73669386|ref|YP_305401.1| - 0.093 12.0 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 2-keto-3-deoxygluconate permease RIC3 PF15361.6 gi|73669386|ref|YP_305401.1| - 0.13 12.7 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 DUF1707 PF08044.11 gi|73669386|ref|YP_305401.1| - 0.16 12.0 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1707) HMA PF00403.26 gi|73669387|ref|YP_305402.1| - 1.7e-17 63.6 1.7 1.9e-17 63.5 1.7 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain TusA PF01206.17 gi|73669387|ref|YP_305402.1| - 0.07 13.0 0.2 0.12 12.2 0.2 1.5 1 1 0 1 1 1 0 Sulfurtransferase TusA HMA PF00403.26 gi|73669388|ref|YP_305403.1| - 1e-08 35.5 0.1 1.2e-08 35.3 0.1 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain HxlR PF01638.17 gi|73669389|ref|YP_305404.1| - 4.6e-22 77.7 0.0 5.7e-22 77.4 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|73669389|ref|YP_305404.1| - 9e-05 22.4 0.0 0.00012 21.9 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family B-block_TFIIIC PF04182.12 gi|73669389|ref|YP_305404.1| - 0.00022 21.3 0.0 0.00031 20.8 0.0 1.3 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR_2 PF12802.7 gi|73669389|ref|YP_305404.1| - 0.00045 20.0 0.0 0.0007 19.4 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|73669389|ref|YP_305404.1| - 0.0013 18.6 0.0 0.0019 18.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|73669389|ref|YP_305404.1| - 0.011 15.7 0.0 0.022 14.7 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Imm70 PF15601.6 gi|73669389|ref|YP_305404.1| - 0.019 14.5 0.0 0.023 14.2 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 70 HTH_24 PF13412.6 gi|73669389|ref|YP_305404.1| - 0.042 13.4 0.0 0.075 12.6 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|73669389|ref|YP_305404.1| - 0.14 12.6 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator CbiA PF01656.23 gi|73669390|ref|YP_305405.1| - 4.1e-13 49.5 0.0 5.7e-13 49.1 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|73669390|ref|YP_305405.1| - 1.3e-07 31.3 1.0 2.2e-07 30.6 1.0 1.6 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|73669390|ref|YP_305405.1| - 3.6e-07 30.3 0.4 5.2e-07 29.8 0.3 1.5 1 1 0 1 1 1 1 AAA domain APS_kinase PF01583.20 gi|73669390|ref|YP_305405.1| - 1.3e-06 28.4 0.1 2e-06 27.8 0.1 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase CBP_BcsQ PF06564.12 gi|73669390|ref|YP_305405.1| - 9.1e-06 25.3 0.0 0.00028 20.5 0.0 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|73669390|ref|YP_305405.1| - 1.4e-05 24.4 0.6 2.7e-05 23.5 0.6 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase Fer4_NifH PF00142.18 gi|73669390|ref|YP_305405.1| - 4.3e-05 23.1 0.3 0.00015 21.3 0.2 2.0 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DUF87 PF01935.17 gi|73669390|ref|YP_305405.1| - 4.3e-05 23.7 0.4 8.4e-05 22.8 0.2 1.6 2 0 0 2 2 1 1 Helicase HerA, central domain AAA_25 PF13481.6 gi|73669390|ref|YP_305405.1| - 7.1e-05 22.5 0.0 0.0043 16.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain SRP54 PF00448.22 gi|73669390|ref|YP_305405.1| - 7.2e-05 22.5 0.2 0.00026 20.7 0.1 1.9 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain KTI12 PF08433.10 gi|73669390|ref|YP_305405.1| - 9.2e-05 22.0 0.0 0.00015 21.3 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 MipZ PF09140.11 gi|73669390|ref|YP_305405.1| - 0.00021 20.7 0.0 0.00039 19.8 0.0 1.6 2 0 0 2 2 2 1 ATPase MipZ GTP_EFTU PF00009.27 gi|73669390|ref|YP_305405.1| - 0.00034 20.2 0.2 0.033 13.7 0.0 2.2 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain CLP1_P PF16575.5 gi|73669390|ref|YP_305405.1| - 0.00052 19.9 0.0 0.0013 18.6 0.0 1.7 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop Zeta_toxin PF06414.12 gi|73669390|ref|YP_305405.1| - 0.00065 19.0 0.1 0.0011 18.3 0.1 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_24 PF13479.6 gi|73669390|ref|YP_305405.1| - 0.00078 19.2 0.2 0.016 14.9 0.1 2.2 2 0 0 2 2 2 1 AAA domain ATPase PF06745.13 gi|73669390|ref|YP_305405.1| - 0.00091 18.6 0.1 0.0065 15.9 0.1 2.1 2 0 0 2 2 2 1 KaiC MMR_HSR1 PF01926.23 gi|73669390|ref|YP_305405.1| - 0.001 19.1 0.2 0.63 10.1 0.0 2.4 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_18 PF13238.6 gi|73669390|ref|YP_305405.1| - 0.0024 18.4 1.2 0.0082 16.7 1.2 2.0 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|73669390|ref|YP_305405.1| - 0.0037 17.6 0.7 0.0094 16.3 0.7 1.7 1 1 0 1 1 1 1 RNA helicase AAA_16 PF13191.6 gi|73669390|ref|YP_305405.1| - 0.0053 17.2 0.0 0.048 14.0 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain ATP_bind_1 PF03029.17 gi|73669390|ref|YP_305405.1| - 0.02 14.7 0.3 0.04 13.7 0.2 1.5 2 0 0 2 2 1 0 Conserved hypothetical ATP binding protein ABC_tran PF00005.27 gi|73669390|ref|YP_305405.1| - 0.024 15.1 0.9 0.042 14.4 0.9 1.6 1 1 0 1 1 1 0 ABC transporter AAA_10 PF12846.7 gi|73669390|ref|YP_305405.1| - 0.028 13.4 1.0 0.57 9.0 0.2 2.4 2 1 1 3 3 3 0 AAA-like domain Thymidylate_kin PF02223.17 gi|73669390|ref|YP_305405.1| - 0.028 14.1 0.6 0.06 13.0 0.0 1.9 2 0 0 2 2 1 0 Thymidylate kinase AAA_33 PF13671.6 gi|73669390|ref|YP_305405.1| - 0.03 14.5 0.0 0.051 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 gi|73669390|ref|YP_305405.1| - 0.036 14.0 0.1 0.036 14.0 0.1 1.7 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B MeaB PF03308.16 gi|73669390|ref|YP_305405.1| - 0.046 12.7 0.1 0.081 11.9 0.1 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 gi|73669390|ref|YP_305405.1| - 0.048 13.4 0.5 0.091 12.5 0.5 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ResIII PF04851.15 gi|73669390|ref|YP_305405.1| - 0.05 13.6 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Mur_ligase_M PF08245.12 gi|73669390|ref|YP_305405.1| - 0.058 13.4 0.1 3.2 7.7 0.1 2.3 2 0 0 2 2 2 0 Mur ligase middle domain AAA_7 PF12775.7 gi|73669390|ref|YP_305405.1| - 0.071 12.6 0.2 0.12 11.9 0.2 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region cobW PF02492.19 gi|73669390|ref|YP_305405.1| - 0.071 12.7 1.6 5.4 6.6 0.1 2.6 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain IstB_IS21 PF01695.17 gi|73669390|ref|YP_305405.1| - 0.08 12.7 0.1 0.15 11.8 0.1 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_30 PF13604.6 gi|73669390|ref|YP_305405.1| - 0.082 12.6 0.1 0.14 11.8 0.1 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|73669390|ref|YP_305405.1| - 0.084 12.8 0.1 0.2 11.6 0.1 1.6 1 0 0 1 1 1 0 NTPase G-alpha PF00503.20 gi|73669390|ref|YP_305405.1| - 0.087 12.0 0.4 0.26 10.4 0.1 1.8 2 0 0 2 2 2 0 G-protein alpha subunit TrkA_N PF02254.18 gi|73669390|ref|YP_305405.1| - 0.12 12.6 0.0 0.37 11.0 0.0 1.8 2 0 0 2 2 1 0 TrkA-N domain TrwB_AAD_bind PF10412.9 gi|73669390|ref|YP_305405.1| - 0.13 11.2 0.2 0.23 10.3 0.0 1.5 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain T2SSE PF00437.20 gi|73669390|ref|YP_305405.1| - 0.15 11.1 0.0 0.23 10.5 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein Gtr1_RagA PF04670.12 gi|73669390|ref|YP_305405.1| - 0.15 11.3 0.1 0.24 10.7 0.1 1.4 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Roc PF08477.13 gi|73669390|ref|YP_305405.1| - 0.16 12.2 0.5 1.7 8.9 0.2 2.5 3 0 0 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase Helicase_RecD PF05127.14 gi|73669390|ref|YP_305405.1| - 0.22 11.3 0.2 0.5 10.2 0.2 1.8 1 1 0 1 1 1 0 Helicase FtsK_SpoIIIE PF01580.18 gi|73669390|ref|YP_305405.1| - 0.65 9.3 1.9 1.4 8.2 1.9 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family Flavin_Reduct PF01613.18 gi|73669391|ref|YP_305406.1| - 2.3e-18 66.7 0.0 2.9e-18 66.4 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 gi|73669391|ref|YP_305406.1| - 0.062 13.1 0.0 0.14 11.9 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF447) dTDP_sugar_isom PF00908.17 gi|73669392|ref|YP_305407.1| - 8.1e-18 64.7 0.0 9.6e-18 64.4 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase FdtA PF05523.11 gi|73669392|ref|YP_305407.1| - 2.1e-09 37.2 0.0 3e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 WxcM-like, C-terminal Cupin_2 PF07883.11 gi|73669392|ref|YP_305407.1| - 0.014 15.1 0.1 1.5 8.6 0.0 2.2 2 0 0 2 2 2 0 Cupin domain HMA PF00403.26 gi|73669393|ref|YP_305408.1| - 5.3e-19 68.4 3.3 5.8e-19 68.3 3.3 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain TusA PF01206.17 gi|73669393|ref|YP_305408.1| - 0.033 14.0 0.3 0.054 13.3 0.3 1.5 1 1 0 1 1 1 0 Sulfurtransferase TusA DUF2460 PF09343.10 gi|73669393|ref|YP_305408.1| - 0.084 12.4 0.1 0.084 12.4 0.1 1.1 1 0 0 1 1 1 0 Conserved hypothetical protein 2217 (DUF2460) E1-E2_ATPase PF00122.20 gi|73669394|ref|YP_305409.1| - 1.4e-54 184.4 2.1 1.4e-54 184.4 2.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase HMA PF00403.26 gi|73669394|ref|YP_305409.1| - 9.7e-51 170.1 5.6 3.9e-17 62.4 0.3 3.6 3 0 0 3 3 3 3 Heavy-metal-associated domain Hydrolase PF00702.26 gi|73669394|ref|YP_305409.1| - 1.7e-41 142.9 2.6 3.6e-41 141.8 2.6 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|73669394|ref|YP_305409.1| - 2.6e-05 24.1 1.8 0.0011 18.8 0.5 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Tox-PL-2 PF15643.6 gi|73669394|ref|YP_305409.1| - 0.022 14.8 1.7 3.5 7.8 0.0 2.9 2 1 1 3 3 3 0 Papain fold toxin 2 SNAD4 PF18750.1 gi|73669394|ref|YP_305409.1| - 0.034 14.3 0.1 9.1 6.4 0.0 2.9 3 0 0 3 3 3 0 Secreted Novel AID/APOBEC-like Deaminase 4 Fer2_BFD PF04324.15 gi|73669394|ref|YP_305409.1| - 0.041 14.2 5.9 21 5.5 0.0 4.9 4 0 0 4 4 4 0 BFD-like [2Fe-2S] binding domain DUF2628 PF10947.8 gi|73669394|ref|YP_305409.1| - 1 9.8 4.1 0.76 10.2 1.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2628) DDE_Tnp_Tn3 PF01526.17 gi|73669395|ref|YP_305410.1| - 0.13 11.0 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Tn3 transposase DDE domain SieB PF14163.6 gi|73669395|ref|YP_305410.1| - 0.15 11.5 0.9 0.23 10.9 0.9 1.3 1 1 0 1 1 1 0 Super-infection exclusion protein B Rubrerythrin PF02915.17 gi|73669396|ref|YP_305411.1| - 1.3e-23 83.9 4.1 1.9e-23 83.4 4.1 1.2 1 0 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|73669396|ref|YP_305411.1| - 0.0023 17.9 1.0 0.0028 17.6 1.0 1.1 1 0 0 1 1 1 1 Ferritin-like domain zf-C3HC4_3 PF13920.6 gi|73669396|ref|YP_305411.1| - 0.011 15.6 0.2 0.016 15.1 0.2 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.7 gi|73669396|ref|YP_305411.1| - 0.019 15.0 0.2 0.029 14.4 0.2 1.2 1 0 0 1 1 1 0 Double zinc ribbon Prok-RING_4 PF14447.6 gi|73669396|ref|YP_305411.1| - 0.022 14.6 0.2 0.033 14.1 0.2 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 HypA PF01155.19 gi|73669396|ref|YP_305411.1| - 0.041 13.9 0.4 0.062 13.3 0.4 1.4 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|73669396|ref|YP_305411.1| - 0.045 13.9 1.5 0.1 12.7 1.5 1.6 1 0 0 1 1 1 0 Zinc ribbon domain NRDD PF13597.6 gi|73669396|ref|YP_305411.1| - 0.064 12.0 0.7 0.1 11.4 0.7 1.2 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase NinF PF05810.12 gi|73669396|ref|YP_305411.1| - 0.11 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 NinF protein RecR PF02132.15 gi|73669396|ref|YP_305411.1| - 0.17 11.5 0.5 0.38 10.4 0.5 1.5 1 0 0 1 1 1 0 RecR protein zinc_ribbon_2 PF13240.6 gi|73669396|ref|YP_305411.1| - 0.2 11.4 1.2 4.1 7.3 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|73669396|ref|YP_305411.1| - 0.67 9.4 3.1 0.68 9.4 0.5 2.0 2 0 0 2 2 2 0 zinc-ribbon domain HSP20 PF00011.21 gi|73669397|ref|YP_305412.1| - 8.4e-06 25.9 0.2 0.0014 18.8 0.2 2.1 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|73669397|ref|YP_305412.1| - 0.0008 18.9 0.0 0.0044 16.5 0.0 2.0 1 1 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|73669397|ref|YP_305412.1| - 0.0032 18.5 0.1 0.0053 17.7 0.1 1.4 1 1 0 1 1 1 1 CS domain Phasin PF05597.11 gi|73669398|ref|YP_305413.1| - 2.6e-08 33.9 7.5 2.3e-06 27.6 7.5 2.0 1 1 0 1 1 1 1 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF1192 PF06698.11 gi|73669398|ref|YP_305413.1| - 0.00078 19.4 1.1 0.00078 19.4 1.1 1.9 2 1 0 2 2 2 1 Protein of unknown function (DUF1192) Lzipper-MIP1 PF14389.6 gi|73669398|ref|YP_305413.1| - 0.0019 18.5 6.2 0.0019 18.5 6.2 1.4 2 0 0 2 2 1 1 Leucine-zipper of ternary complex factor MIP1 GatB_Yqey PF02637.18 gi|73669398|ref|YP_305413.1| - 0.0033 17.3 5.6 0.0042 17.0 5.6 1.2 1 0 0 1 1 1 1 GatB domain CtsR_C PF17727.1 gi|73669398|ref|YP_305413.1| - 0.0089 16.1 0.4 0.25 11.5 0.0 2.5 3 0 0 3 3 3 1 CtsR C-terminal dimerization domain Tox-URI2 PF15653.6 gi|73669398|ref|YP_305413.1| - 0.029 14.6 3.8 0.042 14.1 3.8 1.5 1 1 0 1 1 1 0 URI fold toxin 2 DUF655 PF04919.12 gi|73669398|ref|YP_305413.1| - 0.043 13.8 6.2 0.058 13.4 6.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF655) FAM25 PF15825.5 gi|73669398|ref|YP_305413.1| - 0.075 13.4 3.4 0.11 12.8 3.4 1.3 1 0 0 1 1 1 0 FAM25 family Cob_adeno_trans PF01923.18 gi|73669398|ref|YP_305413.1| - 0.093 12.9 2.4 0.11 12.6 2.4 1.1 1 0 0 1 1 1 0 Cobalamin adenosyltransferase TipAS PF07739.13 gi|73669398|ref|YP_305413.1| - 0.13 12.8 3.5 2.3 8.8 0.6 2.1 1 1 0 2 2 2 0 TipAS antibiotic-recognition domain HSBP1 PF06825.12 gi|73669398|ref|YP_305413.1| - 0.17 11.7 5.9 0.22 11.4 0.7 2.8 1 1 1 2 2 2 0 Heat shock factor binding protein 1 DUF883 PF05957.13 gi|73669398|ref|YP_305413.1| - 0.22 12.1 3.5 0.24 12.0 1.3 1.8 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Mnd1 PF03962.15 gi|73669398|ref|YP_305413.1| - 0.28 11.5 5.1 0.5 10.7 0.1 2.9 2 1 1 3 3 3 0 Mnd1 HTH domain GreA_GreB_N PF03449.15 gi|73669398|ref|YP_305413.1| - 0.55 10.4 10.0 6.1 7.1 8.6 2.7 1 1 1 2 2 2 0 Transcription elongation factor, N-terminal DUF1664 PF07889.12 gi|73669398|ref|YP_305413.1| - 0.73 9.9 7.4 0.95 9.5 7.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 gi|73669398|ref|YP_305413.1| - 2.7 8.5 7.1 25 5.4 7.1 2.0 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) YtxH PF12732.7 gi|73669398|ref|YP_305413.1| - 3.4 8.3 9.9 14 6.3 9.9 2.0 1 1 0 1 1 1 0 YtxH-like protein DUF2353 PF09789.9 gi|73669400|ref|YP_305415.1| - 0.0022 17.4 24.4 0.022 14.1 10.6 2.5 2 1 0 2 2 2 2 Uncharacterized coiled-coil protein (DUF2353) YbgS PF13985.6 gi|73669400|ref|YP_305415.1| - 0.033 14.5 0.4 0.086 13.1 0.1 1.8 2 0 0 2 2 2 0 YbgS-like protein DUF3391 PF11871.8 gi|73669400|ref|YP_305415.1| - 0.31 11.6 9.2 2.1 8.9 2.4 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF3391) RSRP PF17069.5 gi|73669400|ref|YP_305415.1| - 6.1 6.3 8.6 0.16 11.5 2.0 1.7 2 0 0 2 2 2 0 Arginine/Serine-Rich protein 1 HTH_24 PF13412.6 gi|73669401|ref|YP_305416.1| - 0.00056 19.4 0.5 0.0011 18.5 0.5 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|73669401|ref|YP_305416.1| - 0.00057 19.8 0.1 0.0017 18.3 0.1 1.7 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|73669401|ref|YP_305416.1| - 0.0016 18.3 0.7 0.0065 16.3 0.1 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 gi|73669401|ref|YP_305416.1| - 0.0029 17.6 0.1 0.0071 16.3 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|73669401|ref|YP_305416.1| - 0.0045 16.9 0.0 0.0086 15.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|73669401|ref|YP_305416.1| - 0.013 15.3 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF2207 PF09972.9 gi|73669401|ref|YP_305416.1| - 0.026 13.3 0.6 0.12 11.1 0.0 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) HTH_27 PF13463.6 gi|73669401|ref|YP_305416.1| - 0.065 13.7 0.1 0.15 12.6 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain CarboxypepD_reg PF13620.6 gi|73669401|ref|YP_305416.1| - 0.076 13.3 0.1 0.14 12.5 0.1 1.4 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain DUF2007 PF09413.10 gi|73669402|ref|YP_305417.1| - 0.035 14.3 0.1 2.2 8.5 0.0 2.3 2 0 0 2 2 2 0 Putative prokaryotic signal transducing protein Sigma70_r1_1 PF03979.14 gi|73669402|ref|YP_305417.1| - 0.062 13.4 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 Homoserine_dh PF00742.19 gi|73669403|ref|YP_305418.1| - 6.1e-57 192.3 1.4 1.1e-56 191.5 0.3 1.8 2 0 0 2 2 2 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|73669403|ref|YP_305418.1| - 2e-11 44.6 0.1 4e-11 43.6 0.1 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|73669403|ref|YP_305418.1| - 0.00018 21.3 2.3 0.00023 21.0 0.1 2.4 3 0 0 3 3 3 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|73669403|ref|YP_305418.1| - 0.014 15.6 0.3 0.035 14.4 0.3 1.7 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DXP_reductoisom PF02670.16 gi|73669403|ref|YP_305418.1| - 0.035 14.8 0.1 0.086 13.6 0.1 1.7 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase DNA_ligase_A_M PF01068.21 gi|73669404|ref|YP_305419.1| - 1.9e-57 194.2 0.3 3.1e-57 193.5 0.3 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|73669404|ref|YP_305419.1| - 7.3e-33 114.3 0.1 2.6e-32 112.5 0.1 2.0 1 1 1 2 2 2 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|73669404|ref|YP_305419.1| - 2.4e-19 69.8 0.0 8.7e-19 68.0 0.0 2.0 1 1 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|73669404|ref|YP_305419.1| - 5.8e-06 26.7 0.1 9.9e-06 26.0 0.1 1.4 1 0 0 1 1 1 1 RNA ligase mRNA_cap_enzyme PF01331.19 gi|73669404|ref|YP_305419.1| - 0.021 14.6 0.0 5.8 6.7 0.0 2.3 2 0 0 2 2 2 0 mRNA capping enzyme, catalytic domain DNA_ligase_OB_2 PF14743.6 gi|73669404|ref|YP_305419.1| - 0.15 12.1 0.2 0.85 9.7 0.2 2.3 1 1 0 1 1 1 0 DNA ligase OB-like domain HemS PF05171.12 gi|73669405|ref|YP_305420.1| - 0.037 14.0 0.1 6.4 6.7 0.1 2.1 1 1 1 2 2 2 0 Haemin-degrading HemS.ChuX domain ChuX_HutX PF06228.13 gi|73669405|ref|YP_305420.1| - 0.068 12.9 0.0 1.6 8.5 0.0 1.9 1 1 1 2 2 2 0 Haem utilisation ChuX/HutX Big_1 PF02369.16 gi|73669405|ref|YP_305420.1| - 0.084 12.9 0.1 0.21 11.6 0.0 1.7 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 1) FlgD_ig PF13860.6 gi|73669405|ref|YP_305420.1| - 0.11 12.3 1.3 2.1 8.3 0.1 2.6 2 1 0 2 2 2 0 FlgD Ig-like domain FlaG PF03646.15 gi|73669405|ref|YP_305420.1| - 0.65 10.2 3.8 0.84 9.8 0.4 2.1 2 0 0 2 2 2 0 FlaG protein UPF0228 PF05727.11 gi|73669407|ref|YP_305422.1| - 1.3e-34 118.6 0.8 2.2e-34 117.9 0.5 1.5 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0228) ECSCR PF15820.5 gi|73669407|ref|YP_305422.1| - 0.017 14.9 0.7 0.028 14.3 0.7 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF4179 PF13786.6 gi|73669407|ref|YP_305422.1| - 0.054 14.0 0.1 0.08 13.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF4811 PF16069.5 gi|73669407|ref|YP_305422.1| - 0.12 12.2 0.4 0.22 11.4 0.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4811) DDE_Tnp_1 PF01609.21 gi|73669408|ref|YP_305423.1| - 1.6e-12 47.6 1.2 1.4e-11 44.5 1.2 2.0 1 1 0 1 1 1 1 Transposase DDE domain Reprolysin_5 PF13688.6 gi|73669410|ref|YP_305425.1| - 6e-23 82.0 6.7 9.7e-23 81.3 6.7 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_3 PF13582.6 gi|73669410|ref|YP_305425.1| - 7e-06 26.6 0.7 2e-05 25.1 0.7 1.8 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like DUF840 PF05801.11 gi|73669410|ref|YP_305425.1| - 0.0011 19.1 0.4 0.002 18.2 0.4 1.4 1 0 0 1 1 1 1 Lagovirus protein of unknown function (DUF840) DUF1724 PF08350.10 gi|73669411|ref|YP_305426.1| - 1.4e-18 66.8 0.5 1.6e-17 63.4 0.1 2.7 3 0 0 3 3 3 1 Domain of unknown function (DUF1724) HxlR PF01638.17 gi|73669411|ref|YP_305426.1| - 0.0044 16.8 0.1 0.012 15.4 0.1 1.7 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 gi|73669411|ref|YP_305426.1| - 0.016 15.1 0.6 0.06 13.2 0.6 2.0 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Ca_bind_SSO6904 PF18249.1 gi|73669411|ref|YP_305426.1| - 0.037 14.4 1.3 0.072 13.4 0.3 1.9 2 0 0 2 2 2 0 Calcium binding protein SSO6904 HTH_27 PF13463.6 gi|73669411|ref|YP_305426.1| - 0.083 13.4 0.1 0.17 12.4 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain MMR_HSR1 PF01926.23 gi|73669412|ref|YP_305427.1| - 9.2e-19 67.6 0.0 1.2e-18 67.2 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|73669412|ref|YP_305427.1| - 2.3e-11 43.5 0.1 4.3e-10 39.3 0.1 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|73669412|ref|YP_305427.1| - 6.4e-05 22.9 0.5 0.034 14.1 0.1 3.1 3 1 0 3 3 3 2 RsgA GTPase Septin PF00735.18 gi|73669412|ref|YP_305427.1| - 6.7e-05 22.3 0.0 0.00014 21.2 0.0 1.5 1 1 0 1 1 1 1 Septin GTP_EFTU PF00009.27 gi|73669412|ref|YP_305427.1| - 0.0007 19.2 0.0 0.0085 15.6 0.0 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 gi|73669412|ref|YP_305427.1| - 0.00094 19.3 0.1 0.0016 18.5 0.1 1.5 1 1 0 1 1 1 1 Dynamin family SRPRB PF09439.10 gi|73669412|ref|YP_305427.1| - 0.024 14.1 0.0 0.069 12.6 0.0 1.7 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_18 PF13238.6 gi|73669412|ref|YP_305427.1| - 0.027 15.0 0.0 0.046 14.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain Roc PF08477.13 gi|73669412|ref|YP_305427.1| - 0.031 14.5 0.1 0.065 13.5 0.0 1.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase DUF3367 PF11847.8 gi|73669413|ref|YP_305428.1| - 0.028 12.3 0.5 0.048 11.5 0.5 1.3 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase TF_Zn_Ribbon PF08271.12 gi|73669415|ref|YP_305430.1| - 8.1e-05 22.1 0.7 9.4e-05 21.9 0.7 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|73669415|ref|YP_305430.1| - 0.00045 19.5 1.5 0.037 13.4 0.2 2.1 2 0 0 2 2 2 1 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|73669415|ref|YP_305430.1| - 0.00053 19.6 1.4 0.29 10.8 0.1 2.1 2 0 0 2 2 2 2 NADH pyrophosphatase zinc ribbon domain RNA_POL_M_15KD PF02150.16 gi|73669415|ref|YP_305430.1| - 0.00056 19.7 1.1 0.00065 19.5 1.1 1.2 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit zinc_ribbon_2 PF13240.6 gi|73669415|ref|YP_305430.1| - 0.0019 17.8 7.8 0.061 13.1 7.8 2.1 1 1 0 1 1 1 1 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|73669415|ref|YP_305430.1| - 0.0033 17.3 0.8 1 9.3 0.1 2.1 2 0 0 2 2 2 2 Nudix N-terminal OrfB_Zn_ribbon PF07282.11 gi|73669415|ref|YP_305430.1| - 0.0041 17.0 2.1 0.0087 16.0 2.1 1.5 1 1 0 1 1 1 1 Putative transposase DNA-binding domain DNA_ligase_ZBD PF03119.16 gi|73669415|ref|YP_305430.1| - 0.0062 16.5 0.3 0.025 14.6 0.0 1.9 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain DZR PF12773.7 gi|73669415|ref|YP_305430.1| - 0.0091 16.0 2.2 0.036 14.1 2.1 1.6 1 1 0 1 1 1 1 Double zinc ribbon Cys_rich_CPCC PF14206.6 gi|73669415|ref|YP_305430.1| - 0.0095 15.7 0.5 0.01 15.6 0.5 1.1 1 0 0 1 1 1 1 Cysteine-rich CPCC Prok-RING_1 PF14446.6 gi|73669415|ref|YP_305430.1| - 0.01 15.8 0.3 0.012 15.5 0.3 1.1 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF35_N PF12172.8 gi|73669415|ref|YP_305430.1| - 0.01 15.7 4.2 0.58 10.1 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-tcix PF14952.6 gi|73669415|ref|YP_305430.1| - 0.016 14.9 2.4 1.2 8.8 2.3 2.1 1 1 1 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding RecR PF02132.15 gi|73669415|ref|YP_305430.1| - 0.018 14.6 1.6 0.3 10.7 0.1 2.1 1 1 1 2 2 2 0 RecR protein zf-HIT PF04438.16 gi|73669415|ref|YP_305430.1| - 0.035 14.0 3.8 0.15 12.0 1.9 2.0 1 1 1 2 2 2 0 HIT zinc finger UPF0547 PF10571.9 gi|73669415|ref|YP_305430.1| - 0.053 13.6 3.8 2.2 8.5 0.4 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-TFIIB PF13453.6 gi|73669415|ref|YP_305430.1| - 0.06 12.7 3.2 0.11 11.8 3.2 1.5 1 1 0 1 1 1 0 Transcription factor zinc-finger Rad50_zn_hook PF04423.14 gi|73669415|ref|YP_305430.1| - 0.078 12.8 0.3 0.12 12.2 0.3 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif FAM35_C PF15793.5 gi|73669415|ref|YP_305430.1| - 0.093 12.1 0.3 0.093 12.1 0.3 1.0 1 0 0 1 1 1 0 Protein family FAM35, C-terminal Lar_restr_allev PF14354.6 gi|73669415|ref|YP_305430.1| - 0.12 12.7 2.7 0.26 11.7 2.7 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar Auto_anti-p27 PF06677.12 gi|73669415|ref|YP_305430.1| - 0.13 12.5 2.7 0.26 11.5 2.7 1.5 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zn-ribbon_14 PF16503.5 gi|73669415|ref|YP_305430.1| - 0.14 11.7 3.8 2 8.0 0.2 2.2 2 0 0 2 2 2 0 Zinc-ribbon Zn-ribbon_8 PF09723.10 gi|73669415|ref|YP_305430.1| - 0.18 12.0 3.5 0.38 10.9 0.6 2.0 1 1 0 1 1 1 0 Zinc ribbon domain zf-H2C2_2 PF13465.6 gi|73669415|ref|YP_305430.1| - 1.9 9.1 5.3 13 6.4 0.2 2.2 1 1 1 2 2 2 0 Zinc-finger double domain AAA_13 PF13166.6 gi|73669416|ref|YP_305431.1| - 0.0032 16.2 5.8 0.0043 15.8 5.8 1.2 1 0 0 1 1 1 1 AAA domain SPACA9 PF15120.6 gi|73669416|ref|YP_305431.1| - 0.0046 16.7 3.9 0.0046 16.7 3.9 2.5 2 1 1 3 3 3 1 Sperm acrosome-associated protein 9 Exonuc_VII_L PF02601.15 gi|73669416|ref|YP_305431.1| - 0.029 13.9 3.8 0.02 14.5 2.1 1.5 2 0 0 2 2 2 0 Exonuclease VII, large subunit DUF948 PF06103.11 gi|73669416|ref|YP_305431.1| - 0.31 11.3 14.6 0.82 10.0 1.6 3.3 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) NPV_P10 PF05531.12 gi|73669416|ref|YP_305431.1| - 0.42 11.1 20.8 0.32 11.5 2.8 3.8 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein CC2-LZ PF16516.5 gi|73669416|ref|YP_305431.1| - 1.1 9.7 7.7 8.5 6.8 1.5 2.9 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Osmo_CC PF08946.10 gi|73669416|ref|YP_305431.1| - 2.3 8.5 8.3 50 4.3 0.8 3.7 3 0 0 3 3 3 0 Osmosensory transporter coiled coil Prominin PF05478.11 gi|73669416|ref|YP_305431.1| - 2.5 5.9 14.9 0.81 7.6 10.6 1.9 2 0 0 2 2 2 0 Prominin TBCC_N PF16752.5 gi|73669416|ref|YP_305431.1| - 3.6 8.1 12.7 19 5.7 0.1 3.8 2 1 1 3 3 3 0 Tubulin-specific chaperone C N-terminal domain DUF4407 PF14362.6 gi|73669416|ref|YP_305431.1| - 3.6 6.8 8.0 5.5 6.3 8.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) CREPT PF16566.5 gi|73669416|ref|YP_305431.1| - 5.7 7.1 10.3 7.6 6.7 1.8 2.8 2 1 1 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour TEX15 PF15326.6 gi|73669416|ref|YP_305431.1| - 8.1 6.1 9.0 1.8 8.2 5.9 1.6 2 0 0 2 2 2 0 Testis expressed sequence 15 Glycos_transf_1 PF00534.20 gi|73669417|ref|YP_305432.1| - 3.5e-36 124.3 0.3 5.5e-36 123.7 0.3 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73669417|ref|YP_305432.1| - 4.5e-29 101.6 0.0 7.9e-29 100.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|73669417|ref|YP_305432.1| - 1.3e-27 96.8 0.7 8e-27 94.3 0.5 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|73669417|ref|YP_305432.1| - 1e-17 65.1 0.0 1.8e-17 64.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|73669417|ref|YP_305432.1| - 4.9e-07 30.1 0.0 8.9e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 gi|73669417|ref|YP_305432.1| - 0.011 14.6 0.0 0.02 13.8 0.0 1.5 1 1 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.6 gi|73669417|ref|YP_305432.1| - 0.092 12.8 0.0 0.19 11.8 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase 4-like Sir1 PF11603.8 gi|73669417|ref|YP_305432.1| - 0.1 13.1 0.0 0.18 12.3 0.0 1.4 1 0 0 1 1 1 0 Regulatory protein Sir1 Glycos_transf_2 PF00535.26 gi|73669418|ref|YP_305433.1| - 2e-22 79.8 0.0 2.8e-22 79.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|73669418|ref|YP_305433.1| - 0.0031 17.4 0.0 0.0053 16.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|73669418|ref|YP_305433.1| - 0.013 15.0 0.0 0.022 14.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|73669418|ref|YP_305433.1| - 0.15 12.6 0.0 0.36 11.4 0.0 1.6 1 1 0 1 1 1 0 Glycosyl transferase family 2 FMN_red PF03358.15 gi|73669419|ref|YP_305434.1| - 5.3e-16 58.7 0.0 7.6e-16 58.2 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_1 PF00258.25 gi|73669419|ref|YP_305434.1| - 7.9e-05 22.9 0.1 0.0017 18.5 0.1 2.2 1 1 1 2 2 2 1 Flavodoxin Flavodoxin_5 PF12724.7 gi|73669419|ref|YP_305434.1| - 0.0002 21.6 0.0 0.059 13.6 0.1 2.2 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_2 PF02525.17 gi|73669419|ref|YP_305434.1| - 0.00021 21.0 0.0 0.00031 20.5 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold PKD PF00801.20 gi|73669420|ref|YP_305435.1| - 6.4e-24 83.6 28.7 2.3e-11 43.4 1.0 3.9 4 0 0 4 4 4 3 PKD domain PGF-CTERM PF18204.1 gi|73669420|ref|YP_305435.1| - 1.2e-06 28.3 0.1 2e-06 27.6 0.1 1.4 1 0 0 1 1 1 1 PGF-CTERM motif PKD_3 PF16820.5 gi|73669420|ref|YP_305435.1| - 1.7e-05 24.5 8.7 0.019 14.7 0.2 3.4 3 0 0 3 3 3 2 PKD-like domain DIM PF08194.12 gi|73669420|ref|YP_305435.1| - 1.7 8.9 3.7 3.5 7.9 3.7 1.5 1 0 0 1 1 1 0 DIM protein FAM76 PF16046.5 gi|73669420|ref|YP_305435.1| - 4.5 6.5 7.3 6.6 6.0 7.3 1.2 1 0 0 1 1 1 0 FAM76 protein DUF5011 PF16403.5 gi|73669420|ref|YP_305435.1| - 9 6.5 11.4 16 5.7 0.1 4.0 4 0 0 4 4 4 0 Domain of unknown function (DUF5011) GREB1 PF15782.5 gi|73669420|ref|YP_305435.1| - 10 3.1 11.5 12 2.8 11.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Glyco_hydro_15 PF00723.21 gi|73669421|ref|YP_305436.1| - 4.6e-14 52.0 0.1 7.6e-08 31.6 0.1 3.4 3 1 1 4 4 4 3 Glycosyl hydrolases family 15 Glyco_transf_36 PF06165.11 gi|73669421|ref|YP_305436.1| - 0.02 14.3 0.1 0.035 13.5 0.1 1.5 1 1 0 1 1 1 0 Glycosyltransferase family 36 Phage_integrase PF00589.22 gi|73669422|ref|YP_305437.1| - 2.8e-05 24.0 0.0 0.21 11.4 0.0 2.2 1 1 0 2 2 2 2 Phage integrase family Phage_integr_3 PF16795.5 gi|73669422|ref|YP_305437.1| - 0.049 13.6 0.0 2.7 7.9 0.0 2.4 2 1 0 2 2 2 0 Archaeal phage integrase PIG-L PF02585.17 gi|73669423|ref|YP_305438.1| - 8.5e-24 84.7 0.1 1.3e-23 84.1 0.1 1.3 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase AKNA PF12443.8 gi|73669423|ref|YP_305438.1| - 0.00087 19.9 0.2 0.003 18.2 0.1 1.8 2 0 0 2 2 2 1 AT-hook-containing transcription factor Phage_holin_1 PF04531.13 gi|73669423|ref|YP_305438.1| - 0.059 13.9 0.4 0.059 13.9 0.4 1.9 2 0 0 2 2 2 0 Bacteriophage holin ATP-grasp_3 PF02655.14 gi|73669424|ref|YP_305439.1| - 2.5e-15 56.9 0.0 3.4e-15 56.4 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|73669424|ref|YP_305439.1| - 1.3e-07 31.4 0.0 2e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_4 PF13535.6 gi|73669424|ref|YP_305439.1| - 5e-06 26.2 0.0 1.5e-05 24.7 0.0 1.6 1 1 1 2 2 2 1 ATP-grasp domain RimK PF08443.11 gi|73669424|ref|YP_305439.1| - 0.00019 21.1 0.0 0.00059 19.5 0.0 1.7 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_ST PF14397.6 gi|73669424|ref|YP_305439.1| - 0.00059 19.2 0.0 0.067 12.4 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp Epimerase PF01370.21 gi|73669424|ref|YP_305439.1| - 0.0017 17.8 0.0 0.0027 17.2 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|73669424|ref|YP_305439.1| - 0.0098 15.3 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Glyco_tranf_2_3 PF13641.6 gi|73669425|ref|YP_305440.1| - 3.3e-34 118.8 0.0 4.1e-34 118.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|73669425|ref|YP_305440.1| - 3.6e-34 118.0 0.0 4.7e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|73669425|ref|YP_305440.1| - 5.2e-19 68.9 0.0 5.2e-19 68.9 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|73669425|ref|YP_305440.1| - 1.1e-17 64.1 0.0 1.5e-17 63.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 gi|73669425|ref|YP_305440.1| - 1.2e-13 51.2 0.0 2.8e-13 50.0 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Chitin_synth_2 PF03142.15 gi|73669425|ref|YP_305440.1| - 0.0005 18.8 11.0 0.72 8.4 0.0 3.0 3 0 0 3 3 3 3 Chitin synthase Glyco_tranf_2_4 PF13704.6 gi|73669425|ref|YP_305440.1| - 0.012 16.1 0.0 0.021 15.4 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 GNT-I PF03071.15 gi|73669425|ref|YP_305440.1| - 0.036 12.8 0.1 0.05 12.4 0.1 1.1 1 0 0 1 1 1 0 GNT-I family SPC25 PF06703.11 gi|73669425|ref|YP_305440.1| - 0.083 12.7 3.7 2.7 7.7 1.9 2.4 2 1 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Acetyltransf_1 PF00583.25 gi|73669427|ref|YP_305442.1| - 4.2e-14 52.8 0.0 5.1e-14 52.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73669427|ref|YP_305442.1| - 2.2e-11 44.0 0.1 3.4e-11 43.4 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73669427|ref|YP_305442.1| - 2e-09 37.5 0.0 2.3e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73669427|ref|YP_305442.1| - 0.00017 21.6 0.0 0.00029 20.9 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 gi|73669427|ref|YP_305442.1| - 0.0032 18.1 0.0 0.0036 18.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73669427|ref|YP_305442.1| - 0.022 14.7 0.0 0.032 14.2 0.0 1.2 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_8 PF13523.6 gi|73669427|ref|YP_305442.1| - 0.047 13.4 0.0 0.083 12.6 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|73669427|ref|YP_305442.1| - 0.061 13.4 0.1 0.093 12.9 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Nudix_hydro PF18290.1 gi|73669427|ref|YP_305442.1| - 0.072 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Nudix hydrolase domain Peptidase_M20 PF01546.28 gi|73669428|ref|YP_305443.1| - 2.4e-27 96.0 0.0 2.9e-27 95.7 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|73669428|ref|YP_305443.1| - 8.8e-08 32.0 0.0 1.9e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain NTP_transf_2 PF01909.23 gi|73669429|ref|YP_305444.1| - 3.3e-06 27.3 0.0 1e-05 25.7 0.0 1.9 2 1 0 2 2 2 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|73669429|ref|YP_305444.1| - 0.093 12.8 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase DDE_Tnp_1 PF01609.21 gi|73669431|ref|YP_305446.1| - 3.6e-22 79.1 0.8 4.4e-22 78.8 0.8 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73669431|ref|YP_305446.1| - 0.0033 17.1 0.2 0.14 11.8 0.2 2.2 1 1 0 1 1 1 1 DDE superfamily endonuclease PKD PF00801.20 gi|73669432|ref|YP_305447.1| - 3.4e-07 30.0 0.6 3.4e-07 30.0 0.6 2.2 2 0 0 2 2 2 1 PKD domain NPCBM_assoc PF10633.9 gi|73669432|ref|YP_305447.1| - 0.00024 21.3 0.2 0.21 11.9 0.2 3.4 1 1 1 2 2 2 1 NPCBM-associated, NEW3 domain of alpha-galactosidase PKD_3 PF16820.5 gi|73669432|ref|YP_305447.1| - 0.01 15.5 1.5 0.022 14.5 0.1 2.3 2 0 0 2 2 2 0 PKD-like domain bMG10 PF17973.1 gi|73669432|ref|YP_305447.1| - 0.011 15.9 0.1 0.052 13.7 0.0 2.2 2 0 0 2 2 2 0 Bacterial Alpha-2-macroglobulin MG10 domain DUF4139 PF13598.6 gi|73669433|ref|YP_305448.1| - 3.6e-09 36.6 11.5 5.6e-08 32.7 11.5 3.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4139) LSM PF01423.22 gi|73669433|ref|YP_305448.1| - 0.00036 20.2 0.1 0.00098 18.8 0.1 1.7 1 0 0 1 1 1 1 LSM domain DUF4140 PF13600.6 gi|73669433|ref|YP_305448.1| - 0.00048 20.5 0.4 0.0016 18.9 0.0 2.1 2 0 0 2 2 2 1 N-terminal domain of unknown function (DUF4140) Propeptide_C25 PF08126.11 gi|73669433|ref|YP_305448.1| - 0.00083 18.5 0.0 0.0022 17.1 0.0 1.7 1 0 0 1 1 1 1 Propeptide_C25 FecR PF04773.13 gi|73669433|ref|YP_305448.1| - 0.022 15.4 1.9 15 6.3 0.0 4.0 4 1 0 4 4 4 0 FecR protein Top6b_C PF18000.1 gi|73669433|ref|YP_305448.1| - 0.07 13.3 6.2 0.12 12.5 1.5 3.3 2 1 1 3 3 3 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain PDT PF00800.18 gi|73669434|ref|YP_305449.1| - 2.1e-56 190.7 0.0 2.6e-56 190.3 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|73669434|ref|YP_305449.1| - 2.4e-13 49.6 0.0 4.1e-13 48.8 0.0 1.4 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|73669434|ref|YP_305449.1| - 0.004 17.7 0.0 0.01 16.4 0.0 1.6 1 0 0 1 1 1 1 ACT domain OAD_gamma PF04277.13 gi|73669435|ref|YP_305450.1| - 0.00027 21.5 0.0 0.00027 21.5 0.0 2.4 3 0 0 3 3 3 1 Oxaloacetate decarboxylase, gamma chain AAA_3 PF07726.11 gi|73669436|ref|YP_305451.1| - 1.4e-63 212.6 0.1 2.5e-63 211.8 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|73669436|ref|YP_305451.1| - 9.5e-20 70.2 0.0 1.6e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|73669436|ref|YP_305451.1| - 3.5e-12 46.5 0.0 6.4e-12 45.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|73669436|ref|YP_305451.1| - 3.6e-06 27.4 0.0 6.5e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|73669436|ref|YP_305451.1| - 6.4e-06 25.4 0.0 1.5e-05 24.2 0.0 1.7 2 0 0 2 2 2 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|73669436|ref|YP_305451.1| - 0.00025 20.8 0.1 0.002 17.9 0.1 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|73669436|ref|YP_305451.1| - 0.00087 19.1 0.0 0.017 14.9 0.0 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|73669436|ref|YP_305451.1| - 0.052 13.7 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 gi|73669436|ref|YP_305451.1| - 0.065 12.6 0.1 0.76 9.1 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 gi|73669436|ref|YP_305451.1| - 0.085 13.2 0.0 6.7 7.0 0.0 2.3 2 0 0 2 2 2 0 AAA domain DUF58 PF01882.18 gi|73669437|ref|YP_305452.1| - 4.9e-24 84.4 0.1 1.9e-23 82.6 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function DUF58 VWA_CoxE PF05762.14 gi|73669437|ref|YP_305452.1| - 3.6e-08 33.1 0.0 5.6e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 gi|73669437|ref|YP_305452.1| - 1.9e-07 31.7 0.0 4e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|73669437|ref|YP_305452.1| - 0.0037 17.5 0.0 0.0067 16.7 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain PaaX PF07848.12 gi|73669437|ref|YP_305452.1| - 0.11 12.7 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 PaaX-like protein BatA PF07584.11 gi|73669438|ref|YP_305453.1| - 5.1e-15 55.6 6.2 9.1e-15 54.8 6.2 1.4 1 0 0 1 1 1 1 Aerotolerance regulator N-terminal VWA_2 PF13519.6 gi|73669438|ref|YP_305453.1| - 0.00021 21.9 0.5 0.00078 20.1 0.2 2.2 2 0 0 2 2 2 1 von Willebrand factor type A domain ThuA PF06283.11 gi|73669438|ref|YP_305453.1| - 0.002 18.4 0.0 0.0068 16.6 0.0 1.9 2 1 0 2 2 2 1 Trehalose utilisation ABC_transp_aux PF09822.9 gi|73669438|ref|YP_305453.1| - 0.0025 17.3 0.1 0.011 15.2 0.0 1.6 1 1 0 1 1 1 1 ABC-type uncharacterized transport system Glyco_hydro_42M PF08532.10 gi|73669438|ref|YP_305453.1| - 0.01 15.3 0.2 0.025 14.1 0.2 1.6 1 1 0 1 1 1 0 Beta-galactosidase trimerisation domain DUF2194 PF09960.9 gi|73669438|ref|YP_305453.1| - 0.023 13.1 0.9 0.029 12.7 0.1 1.6 2 0 0 2 2 2 0 Uncharacterised protein conserved in bacteria (DUF2194) GATase1_like PF07090.11 gi|73669439|ref|YP_305454.1| - 2.3e-08 33.8 0.1 0.00029 20.4 0.0 2.3 2 0 0 2 2 2 2 Putative glutamine amidotransferase VWA PF00092.28 gi|73669439|ref|YP_305454.1| - 2.9e-08 34.2 2.7 4.6e-05 23.7 0.2 2.6 2 0 0 2 2 2 2 von Willebrand factor type A domain LBP_M PF17385.2 gi|73669439|ref|YP_305454.1| - 0.059 12.9 0.0 4.9 6.6 0.0 2.8 2 0 0 2 2 2 0 Lacto-N-biose phosphorylase central domain ThuA PF06283.11 gi|73669439|ref|YP_305454.1| - 0.087 13.0 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 Trehalose utilisation TMEM125 PF15109.6 gi|73669439|ref|YP_305454.1| - 0.092 13.1 0.8 0.68 10.3 0.1 2.3 2 0 0 2 2 2 0 TMEM125 protein family DUF4350 PF14258.6 gi|73669439|ref|YP_305454.1| - 0.11 12.9 2.2 4 8.0 0.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4350) Cytadhesin_P30 PF07271.11 gi|73669439|ref|YP_305454.1| - 0.21 11.1 0.1 0.61 9.6 0.1 1.8 2 0 0 2 2 2 0 Cytadhesin P30/P32 BatA PF07584.11 gi|73669439|ref|YP_305454.1| - 7.3 7.0 9.5 10 6.6 0.2 2.6 1 1 1 2 2 2 0 Aerotolerance regulator N-terminal NTP_transferase PF00483.23 gi|73669441|ref|YP_305456.1| - 4.3e-48 164.1 0.0 5.7e-48 163.6 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|73669441|ref|YP_305456.1| - 2.2e-21 74.7 24.6 6.4e-09 35.2 1.3 5.1 2 2 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73669441|ref|YP_305456.1| - 5.4e-12 45.3 23.9 0.0019 17.9 3.9 5.1 2 2 2 4 4 4 4 Hexapeptide repeat of succinyl-transferase NTP_transf_3 PF12804.7 gi|73669441|ref|YP_305456.1| - 5e-09 36.7 0.0 7.4e-09 36.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF4954 PF16314.5 gi|73669441|ref|YP_305456.1| - 0.046 11.9 5.1 0.071 11.2 5.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Fucokinase PF07959.12 gi|73669441|ref|YP_305456.1| - 0.26 10.2 3.4 1.4 7.8 3.4 2.1 1 1 0 1 1 1 0 L-fucokinase tRNA_anti-codon PF01336.25 gi|73669442|ref|YP_305457.1| - 3.4e-06 27.0 0.0 4.6e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain OstA_2 PF13100.6 gi|73669442|ref|YP_305457.1| - 0.068 12.8 0.0 0.11 12.1 0.0 1.4 1 1 0 1 1 1 0 OstA-like protein FKBP_C PF00254.28 gi|73669443|ref|YP_305458.1| - 4.7e-21 74.9 0.3 6.7e-21 74.4 0.3 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.28 gi|73669444|ref|YP_305459.1| - 4.6e-29 100.6 0.0 7.3e-29 100.0 0.0 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.28 gi|73669445|ref|YP_305460.1| - 1.8e-28 98.7 0.3 2.6e-28 98.2 0.3 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase YajC PF02699.15 gi|73669445|ref|YP_305460.1| - 0.012 15.4 0.0 0.061 13.2 0.1 2.1 3 0 0 3 3 3 0 Preprotein translocase subunit DUF1648 PF07853.11 gi|73669446|ref|YP_305461.1| - 3.3e-18 65.1 0.8 3.3e-18 65.1 0.8 3.5 5 0 0 5 5 5 1 Protein of unknown function (DUF1648) SdpI PF13630.6 gi|73669446|ref|YP_305461.1| - 4.2e-17 62.0 1.2 4.2e-17 62.0 1.2 3.2 3 1 0 3 3 3 1 SdpI/YhfL protein family Ferlin_C PF16165.5 gi|73669446|ref|YP_305461.1| - 0.063 13.2 1.2 0.12 12.3 1.2 1.4 1 0 0 1 1 1 0 Ferlin C-terminus DUF3671 PF12420.8 gi|73669446|ref|YP_305461.1| - 0.47 10.6 7.9 14 5.8 4.2 2.9 1 1 1 2 2 2 0 Protein of unknown function TMEM18 PF14770.6 gi|73669446|ref|YP_305461.1| - 1.6 8.7 5.9 1.4 9.0 0.7 2.5 1 1 1 2 2 2 0 Transmembrane protein 18 DUF3139 PF11337.8 gi|73669446|ref|YP_305461.1| - 6.2 7.6 8.3 16 6.2 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3139) PAS_9 PF13426.7 gi|73669448|ref|YP_305463.1| - 1.2e-54 183.0 4.7 3.6e-15 56.1 0.1 6.2 6 0 0 6 6 6 5 PAS domain PAS_3 PF08447.12 gi|73669448|ref|YP_305463.1| - 1.5e-52 175.8 3.1 2.6e-19 69.3 0.1 6.8 7 0 0 7 7 6 5 PAS fold PAS_4 PF08448.10 gi|73669448|ref|YP_305463.1| - 1.2e-49 167.1 0.0 1.8e-13 50.7 0.0 5.8 5 0 0 5 5 5 5 PAS fold PAS PF00989.25 gi|73669448|ref|YP_305463.1| - 3.4e-45 152.7 0.0 5.9e-14 52.0 0.0 5.8 5 1 0 5 5 5 5 PAS fold MEDS PF14417.6 gi|73669448|ref|YP_305463.1| - 3.5e-45 153.7 1.9 5.9e-45 153.0 0.0 2.5 3 0 0 3 3 3 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HisKA_2 PF07568.12 gi|73669448|ref|YP_305463.1| - 3.6e-33 113.5 0.9 3.6e-33 113.5 0.9 2.7 3 0 0 3 3 3 1 Histidine kinase PAS_8 PF13188.7 gi|73669448|ref|YP_305463.1| - 1.4e-24 85.6 0.0 2.2e-06 27.6 0.0 5.1 5 0 0 5 5 4 4 PAS domain GAF_2 PF13185.6 gi|73669448|ref|YP_305463.1| - 7e-20 71.7 0.0 1.9e-19 70.3 0.0 1.8 1 0 0 1 1 1 1 GAF domain HATPase_c PF02518.26 gi|73669448|ref|YP_305463.1| - 4.7e-08 33.5 0.1 2.2e-07 31.4 0.1 2.2 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF PF01590.26 gi|73669448|ref|YP_305463.1| - 0.00023 21.8 0.0 0.00067 20.3 0.0 1.8 1 0 0 1 1 1 1 GAF domain sCache_3_3 PF17202.4 gi|73669448|ref|YP_305463.1| - 0.00061 20.2 0.2 0.26 11.8 0.0 3.9 5 0 0 5 5 4 1 Single cache domain 3 PAS_10 PF13596.6 gi|73669448|ref|YP_305463.1| - 0.00074 20.1 0.2 11 6.7 0.0 4.2 3 0 0 3 3 3 0 PAS domain HWE_HK PF07536.14 gi|73669448|ref|YP_305463.1| - 0.0016 19.1 0.3 0.0016 19.1 0.3 2.7 3 0 0 3 3 2 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|73669448|ref|YP_305463.1| - 0.0018 18.2 0.0 0.0045 16.9 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_7 PF12860.7 gi|73669448|ref|YP_305463.1| - 0.0019 18.3 1.0 0.74 10.0 0.0 5.2 6 0 0 6 6 6 1 PAS fold Gp-FAR-1 PF05823.12 gi|73669448|ref|YP_305463.1| - 0.007 16.7 0.6 0.04 14.3 0.6 2.3 1 0 0 1 1 1 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) GAF_3 PF13492.6 gi|73669448|ref|YP_305463.1| - 0.16 12.3 0.0 0.68 10.3 0.0 2.1 1 0 0 1 1 1 0 GAF domain MnmE_helical PF12631.7 gi|73669448|ref|YP_305463.1| - 0.44 10.7 6.5 2.4 8.3 1.3 2.6 2 1 0 2 2 2 0 MnmE helical domain Bud13 PF09736.9 gi|73669448|ref|YP_305463.1| - 0.47 10.8 4.7 0.21 12.0 1.0 2.5 2 0 0 2 2 2 0 Pre-mRNA-splicing factor of RES complex p450 PF00067.22 gi|73669449|ref|YP_305464.1| - 1.3e-33 116.5 0.0 6.5e-32 110.9 0.0 2.1 1 1 0 1 1 1 1 Cytochrome P450 Pyr_redox_2 PF07992.14 gi|73669450|ref|YP_305465.1| - 3.3e-40 138.2 0.0 4.3e-40 137.8 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|73669450|ref|YP_305465.1| - 3.5e-16 59.5 0.1 3.9e-13 49.7 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 gi|73669450|ref|YP_305465.1| - 8.7e-12 45.4 0.0 9.4e-11 42.1 0.0 2.6 1 1 1 2 2 2 1 Reductase C-terminal AlaDh_PNT_C PF01262.21 gi|73669450|ref|YP_305465.1| - 0.00019 20.8 2.2 0.0041 16.5 0.2 2.3 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|73669450|ref|YP_305465.1| - 0.0042 17.0 0.5 0.0075 16.2 0.5 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|73669450|ref|YP_305465.1| - 0.0058 16.0 0.0 0.011 15.1 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_2 PF00890.24 gi|73669450|ref|YP_305465.1| - 0.019 14.1 7.1 2.2 7.3 1.3 3.2 3 0 0 3 3 3 0 FAD binding domain NAD_binding_8 PF13450.6 gi|73669450|ref|YP_305465.1| - 0.025 14.8 9.3 0.37 11.0 0.4 3.0 2 1 0 3 3 3 0 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|73669450|ref|YP_305465.1| - 0.032 13.8 10.9 0.014 15.0 4.3 3.1 2 2 0 3 3 3 0 FAD dependent oxidoreductase K_oxygenase PF13434.6 gi|73669450|ref|YP_305465.1| - 0.11 11.6 0.0 0.31 10.2 0.0 1.6 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) FGGY_C PF02782.16 gi|73669450|ref|YP_305465.1| - 0.18 11.5 0.8 0.49 10.1 0.4 1.8 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain NAD_binding_7 PF13241.6 gi|73669450|ref|YP_305465.1| - 0.21 12.0 0.3 1.3 9.5 0.3 2.2 1 1 0 1 1 1 0 Putative NAD(P)-binding NAD_binding_9 PF13454.6 gi|73669450|ref|YP_305465.1| - 0.71 9.8 3.3 27 4.7 0.0 3.3 4 0 0 4 4 4 0 FAD-NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|73669450|ref|YP_305465.1| - 0.93 9.8 3.6 1.4 9.2 1.9 2.1 2 1 0 2 2 1 0 Saccharopine dehydrogenase NADP binding domain GIDA PF01134.22 gi|73669450|ref|YP_305465.1| - 1.9 7.5 6.3 3.8 6.5 2.2 2.5 2 1 0 2 2 2 0 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|73669450|ref|YP_305465.1| - 3.7 6.7 10.8 2.7 7.1 1.1 2.7 3 0 0 3 3 3 0 FAD binding domain Fer4_13 PF13370.6 gi|73669451|ref|YP_305466.1| - 7e-11 42.5 0.6 9.5e-11 42.1 0.6 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|73669451|ref|YP_305466.1| - 2e-09 38.0 3.1 1.1e-08 35.6 3.1 1.9 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_19 PF06902.11 gi|73669451|ref|YP_305466.1| - 6.3e-05 23.0 0.1 8.2e-05 22.6 0.1 1.2 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster SMC_ScpB PF04079.16 gi|73669452|ref|YP_305467.1| - 0.0029 17.2 0.0 0.0037 16.9 0.0 1.1 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB PadR PF03551.14 gi|73669452|ref|YP_305467.1| - 0.05 13.6 0.0 0.078 12.9 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family MarR PF01047.22 gi|73669452|ref|YP_305467.1| - 0.066 13.1 0.0 0.35 10.8 0.0 2.0 1 1 1 2 2 2 0 MarR family Ribosomal_L41 PF05162.13 gi|73669453|ref|YP_305468.1| - 1.3 9.2 11.2 0.54 10.4 2.3 2.4 1 1 1 2 2 2 0 Ribosomal protein L41 SMC_ScpB PF04079.16 gi|73669454|ref|YP_305469.1| - 0.011 15.3 0.1 0.014 15.0 0.1 1.2 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB MRP-L20 PF12824.7 gi|73669454|ref|YP_305469.1| - 0.031 14.5 0.1 0.043 14.0 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 PadR PF03551.14 gi|73669454|ref|YP_305469.1| - 0.11 12.5 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Pyr_redox_2 PF07992.14 gi|73669455|ref|YP_305470.1| - 1.7e-14 53.7 0.0 1.2e-06 28.0 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FlpD PF02662.16 gi|73669455|ref|YP_305470.1| - 4.5e-14 52.5 0.0 1.4e-12 47.7 0.0 3.2 2 1 1 3 3 3 1 Methyl-viologen-reducing hydrogenase, delta subunit Fer4_7 PF12838.7 gi|73669455|ref|YP_305470.1| - 1.4e-12 48.0 26.4 0.00015 22.3 1.2 5.3 5 0 0 5 5 5 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73669455|ref|YP_305470.1| - 8.1e-11 41.3 37.7 2.6e-05 23.8 2.8 5.4 5 1 0 5 5 5 3 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73669455|ref|YP_305470.1| - 4.5e-09 37.1 20.5 0.016 16.1 0.2 4.9 5 0 0 5 5 4 3 4Fe-4S double cluster binding domain FAD_oxidored PF12831.7 gi|73669455|ref|YP_305470.1| - 7.3e-09 35.5 0.0 1.1e-08 34.9 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer4_6 PF12837.7 gi|73669455|ref|YP_305470.1| - 3.9e-08 33.0 37.4 0.0002 21.3 2.5 5.1 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73669455|ref|YP_305470.1| - 9.4e-08 31.7 33.2 0.0027 17.7 4.0 4.9 4 0 0 4 4 4 3 4Fe-4S binding domain DAO PF01266.24 gi|73669455|ref|YP_305470.1| - 1.4e-07 31.5 0.1 3.4e-05 23.6 0.1 2.4 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|73669455|ref|YP_305470.1| - 4.8e-07 29.9 0.1 1.2e-06 28.6 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Fer4_9 PF13187.6 gi|73669455|ref|YP_305470.1| - 7e-07 29.3 38.0 1.2e-05 25.4 8.5 3.7 4 1 0 4 4 2 2 4Fe-4S dicluster domain FAD_binding_2 PF00890.24 gi|73669455|ref|YP_305470.1| - 9.7e-07 28.2 2.2 1.9e-06 27.2 2.2 1.5 1 0 0 1 1 1 1 FAD binding domain Fer4_21 PF14697.6 gi|73669455|ref|YP_305470.1| - 4e-06 26.9 29.4 6.3e-05 23.0 0.6 4.0 4 0 0 4 4 3 3 4Fe-4S dicluster domain GIDA PF01134.22 gi|73669455|ref|YP_305470.1| - 9.3e-05 21.7 0.1 0.00019 20.6 0.1 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.17 gi|73669455|ref|YP_305470.1| - 0.00018 20.8 0.0 0.00033 20.0 0.0 1.5 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 gi|73669455|ref|YP_305470.1| - 0.0013 18.0 0.4 0.0023 17.2 0.4 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|73669455|ref|YP_305470.1| - 0.0017 17.7 0.6 0.0083 15.4 0.7 2.1 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_10 PF13237.6 gi|73669455|ref|YP_305470.1| - 0.0017 18.4 42.4 0.018 15.1 14.8 4.4 4 2 2 6 6 4 3 4Fe-4S dicluster domain Pyr_redox PF00070.27 gi|73669455|ref|YP_305470.1| - 0.0021 18.6 0.4 0.17 12.5 0.5 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|73669455|ref|YP_305470.1| - 0.0025 16.6 1.2 0.0041 15.9 1.2 1.3 1 0 0 1 1 1 1 HI0933-like protein Fer4_22 PF17179.4 gi|73669455|ref|YP_305470.1| - 0.014 16.2 1.0 0.014 16.2 1.0 4.0 3 1 0 3 3 3 0 4Fe-4S dicluster domain Amino_oxidase PF01593.24 gi|73669455|ref|YP_305470.1| - 0.018 14.3 0.0 0.029 13.7 0.0 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Fer4_17 PF13534.6 gi|73669455|ref|YP_305470.1| - 0.02 15.4 34.8 0.085 13.4 3.5 5.1 4 1 2 6 6 5 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73669455|ref|YP_305470.1| - 0.055 13.9 27.5 0.034 14.6 3.5 4.5 3 1 1 4 4 4 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73669456|ref|YP_305471.1| - 9.6e-11 42.0 6.4 1.8e-10 41.1 6.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73669456|ref|YP_305471.1| - 1.9e-08 34.3 5.4 3.5e-08 33.4 5.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73669456|ref|YP_305471.1| - 2.3e-08 34.1 7.6 4.2e-08 33.2 7.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73669456|ref|YP_305471.1| - 3e-07 30.9 8.9 6.3e-07 29.8 8.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73669456|ref|YP_305471.1| - 3.5e-07 30.7 7.8 6.3e-07 29.9 7.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73669456|ref|YP_305471.1| - 2.6e-05 24.4 2.0 2.6e-05 24.4 2.0 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73669456|ref|YP_305471.1| - 0.00016 21.6 3.4 0.00016 21.6 3.4 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73669456|ref|YP_305471.1| - 0.00046 20.1 2.8 0.00046 20.1 2.8 2.0 2 0 0 2 2 1 1 4Fe-4S binding domain Fer4 PF00037.27 gi|73669456|ref|YP_305471.1| - 0.0011 18.7 11.6 0.0014 18.4 3.3 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73669456|ref|YP_305471.1| - 0.0021 18.9 14.6 0.0028 18.6 11.0 2.8 3 1 0 3 3 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|73669456|ref|YP_305471.1| - 0.015 15.4 8.8 0.063 13.4 8.9 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73669456|ref|YP_305471.1| - 0.15 12.6 0.7 0.15 12.6 0.7 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|73669456|ref|YP_305471.1| - 0.5 11.4 15.9 0.69 11.0 5.4 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain GvpK PF05121.12 gi|73669456|ref|YP_305471.1| - 0.63 10.1 3.1 15 5.7 0.0 2.7 3 0 0 3 3 3 0 Gas vesicle protein K Fer4_20 PF14691.6 gi|73669456|ref|YP_305471.1| - 1.6 8.5 8.5 51 3.7 0.5 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_22 PF17179.4 gi|73669456|ref|YP_305471.1| - 9.4 7.2 15.0 0.36 11.7 2.8 2.5 2 1 1 3 3 2 0 4Fe-4S dicluster domain CCG PF02754.16 gi|73669457|ref|YP_305472.1| - 8.5e-16 57.9 13.0 1.4e-07 31.6 4.3 3.1 3 0 0 3 3 3 2 Cysteine-rich domain Qua1 PF16274.5 gi|73669457|ref|YP_305472.1| - 0.037 13.9 0.1 0.12 12.3 0.0 1.9 2 0 0 2 2 2 0 Qua1 domain PKD PF00801.20 gi|73669458|ref|YP_305473.1| - 1.4e-119 390.1 83.6 4.1e-14 52.2 2.1 9.6 9 0 0 9 9 9 9 PKD domain PKD_3 PF16820.5 gi|73669458|ref|YP_305473.1| - 7.5e-20 70.5 39.9 0.02 14.6 1.1 9.9 9 0 0 9 9 9 9 PKD-like domain PG_binding_1 PF01471.18 gi|73669458|ref|YP_305473.1| - 0.0037 17.5 0.0 0.66 10.2 0.0 2.8 2 0 0 2 2 2 1 Putative peptidoglycan binding domain DUF4685 PF15737.5 gi|73669458|ref|YP_305473.1| - 0.0096 16.4 0.0 72 3.8 0.0 4.9 5 0 0 5 5 5 0 Domain of unknown function (DUF4685) FeThRed_A PF02941.15 gi|73669458|ref|YP_305473.1| - 0.021 14.9 0.0 91 3.3 0.0 4.3 4 0 0 4 4 4 0 Ferredoxin thioredoxin reductase variable alpha chain DUF1611 PF07755.11 gi|73669458|ref|YP_305473.1| - 0.057 12.7 1.4 47 3.2 0.0 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF1611_C) P-loop domain He_PIG PF05345.12 gi|73669458|ref|YP_305473.1| - 0.077 13.2 81.8 1.2 9.4 0.5 12.6 13 1 0 13 13 13 0 Putative Ig domain SoxZ PF08770.11 gi|73669458|ref|YP_305473.1| - 0.087 12.6 19.9 3.3 7.5 0.3 5.7 7 0 0 7 7 7 0 Sulphur oxidation protein SoxZ S6OS1 PF15676.5 gi|73669458|ref|YP_305473.1| - 1.6 7.1 16.4 4.5 5.6 0.9 3.2 3 0 0 3 3 3 0 Six6 opposite strand transcript 1 family SHP PF03579.13 gi|73669458|ref|YP_305473.1| - 7.9 6.5 6.8 1.9e+02 2.1 0.1 4.1 4 0 0 4 4 4 0 Small hydrophobic protein Inhibitor_I24 PF10465.9 gi|73669458|ref|YP_305473.1| - 9.5 6.2 8.3 1.2e+02 2.6 0.0 4.3 5 0 0 5 5 5 0 PinA peptidase inhibitor Acetyltransf_7 PF13508.7 gi|73669459|ref|YP_305474.1| - 2e-05 24.9 0.1 3.5e-05 24.1 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73669459|ref|YP_305474.1| - 4.6e-05 23.4 0.0 5.2e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73669459|ref|YP_305474.1| - 0.00086 19.5 0.0 0.0014 18.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family MazE_antitoxin PF04014.18 gi|73669459|ref|YP_305474.1| - 0.08 12.9 0.2 0.21 11.5 0.1 1.7 2 0 0 2 2 2 0 Antidote-toxin recognition MazE, bacterial antitoxin Putative_PNPOx PF01243.20 gi|73669460|ref|YP_305475.1| - 1.1e-06 28.7 0.0 1.5e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Antimicrobial_2 PF08023.12 gi|73669460|ref|YP_305475.1| - 0.15 12.6 0.0 0.29 11.7 0.0 1.4 1 0 0 1 1 1 0 Frog antimicrobial peptide Putative_PNPOx PF01243.20 gi|73669461|ref|YP_305476.1| - 7e-08 32.6 0.0 9.5e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Aconitase PF00330.20 gi|73669462|ref|YP_305477.1| - 2.8e-101 339.8 1.4 3.3e-99 333.0 1.4 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) NARP1 PF12569.8 gi|73669463|ref|YP_305478.1| - 0.007 15.3 0.1 0.0076 15.2 0.1 1.0 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 SEO_C PF14577.6 gi|73669463|ref|YP_305478.1| - 0.015 14.8 0.2 0.015 14.8 0.2 1.0 1 0 0 1 1 1 0 Sieve element occlusion C-terminus SNARE PF05739.19 gi|73669463|ref|YP_305478.1| - 0.11 12.5 0.2 0.26 11.3 0.1 1.6 2 0 0 2 2 2 0 SNARE domain DMPK_coil PF08826.10 gi|73669464|ref|YP_305479.1| - 1.8 8.7 9.1 2.3 8.4 0.1 3.3 2 1 1 3 3 3 0 DMPK coiled coil domain like T2SSF PF00482.23 gi|73669465|ref|YP_305480.1| - 1.2e-12 47.9 8.9 1e-07 31.9 0.1 3.3 3 1 1 4 4 4 2 Type II secretion system (T2SS), protein F RIFIN PF02009.16 gi|73669465|ref|YP_305480.1| - 0.12 12.2 0.2 0.18 11.7 0.2 1.3 1 0 0 1 1 1 0 Rifin MscS_TM PF12794.7 gi|73669465|ref|YP_305480.1| - 0.25 10.2 8.4 0.023 13.6 3.2 1.9 3 0 0 3 3 3 0 Mechanosensitive ion channel inner membrane domain 1 EcsB PF05975.12 gi|73669465|ref|YP_305480.1| - 2.5 6.9 14.2 0.086 11.7 7.9 1.8 2 0 0 2 2 2 0 Bacterial ABC transporter protein EcsB TNFR_16_TM PF18422.1 gi|73669465|ref|YP_305480.1| - 6.2 6.9 8.7 9.2 6.3 1.2 2.9 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain PRA1 PF03208.19 gi|73669465|ref|YP_305480.1| - 7.8 6.1 13.3 0.081 12.5 2.5 2.9 2 2 0 2 2 2 0 PRA1 family protein T2SSE PF00437.20 gi|73669466|ref|YP_305481.1| - 1.1e-44 152.5 0.0 1.6e-44 152.0 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|73669466|ref|YP_305481.1| - 6.3e-06 25.8 0.0 1.5e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|73669466|ref|YP_305481.1| - 0.00098 19.6 0.1 0.005 17.3 0.0 2.3 2 1 0 2 2 2 1 ABC transporter AAA_23 PF13476.6 gi|73669466|ref|YP_305481.1| - 0.023 15.2 4.8 0.03 14.8 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_7 PF12775.7 gi|73669466|ref|YP_305481.1| - 0.059 12.9 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_16 PF13191.6 gi|73669466|ref|YP_305481.1| - 0.13 12.6 0.0 0.39 11.1 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain ATPase PF06745.13 gi|73669467|ref|YP_305482.1| - 7.5e-25 87.6 0.6 8.5e-25 87.4 0.6 1.0 1 0 0 1 1 1 1 KaiC Rad51 PF08423.11 gi|73669467|ref|YP_305482.1| - 1.2e-05 24.7 0.0 1.8e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Rad51 PAXNEB PF05625.11 gi|73669467|ref|YP_305482.1| - 9.3e-05 21.7 1.1 0.00087 18.5 0.1 2.0 1 1 1 2 2 2 1 PAXNEB protein AAA_25 PF13481.6 gi|73669467|ref|YP_305482.1| - 0.00028 20.5 0.0 0.00044 19.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|73669467|ref|YP_305482.1| - 0.00048 20.2 2.5 0.05 13.6 0.1 2.6 1 1 1 2 2 2 2 AAA domain RecA PF00154.21 gi|73669467|ref|YP_305482.1| - 0.00089 18.8 0.1 0.055 12.9 0.0 2.1 2 0 0 2 2 2 1 recA bacterial DNA recombination protein DnaB_C PF03796.15 gi|73669467|ref|YP_305482.1| - 0.01 15.2 0.1 0.024 14.0 0.1 1.6 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain DAP3 PF10236.9 gi|73669467|ref|YP_305482.1| - 0.011 14.9 0.0 0.018 14.2 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_35 PF14516.6 gi|73669467|ref|YP_305482.1| - 0.011 14.6 0.0 0.015 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain Elong_Iki1 PF10483.9 gi|73669467|ref|YP_305482.1| - 0.012 15.1 0.1 0.014 14.9 0.1 1.2 1 0 0 1 1 1 0 Elongator subunit Iki1 DUF835 PF05763.12 gi|73669467|ref|YP_305482.1| - 0.03 14.0 0.6 0.048 13.4 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF835) ATPase_2 PF01637.18 gi|73669467|ref|YP_305482.1| - 0.03 14.2 0.5 0.041 13.8 0.5 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Glyco_hydro_100 PF12899.7 gi|73669467|ref|YP_305482.1| - 0.047 12.4 0.2 0.084 11.5 0.1 1.5 1 1 1 2 2 2 0 Alkaline and neutral invertase Arch_flagellin PF01917.16 gi|73669468|ref|YP_305483.1| - 0.00063 20.0 0.2 0.00083 19.6 0.2 1.2 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.16 gi|73669469|ref|YP_305484.1| - 9.2e-07 29.2 0.0 1.2e-06 28.8 0.0 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin AI-2E_transport PF01594.16 gi|73669469|ref|YP_305484.1| - 0.099 11.8 0.0 0.12 11.5 0.0 1.0 1 0 0 1 1 1 0 AI-2E family transporter Arch_fla_DE PF04659.13 gi|73669470|ref|YP_305485.1| - 0.0097 15.8 0.0 0.022 14.6 0.0 1.6 1 0 0 1 1 1 1 Archaeal flagella protein Arch_flagellin PF01917.16 gi|73669471|ref|YP_305486.1| - 5.5e-28 98.2 8.9 6.7e-28 97.9 8.9 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin HMG-CoA_red PF00368.18 gi|73669472|ref|YP_305487.1| - 1.6e-131 438.7 2.1 1.8e-131 438.5 2.1 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase OrfB_IS605 PF01385.19 gi|73669473|ref|YP_305488.1| - 5.9e-27 94.3 1.8 1.3e-26 93.2 1.8 1.5 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73669473|ref|YP_305488.1| - 2.9e-23 81.6 0.4 6.1e-23 80.5 0.4 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73669473|ref|YP_305488.1| - 2.2e-21 75.0 0.5 4.3e-21 74.1 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73669473|ref|YP_305488.1| - 0.0022 18.1 2.6 0.0024 18.0 0.9 1.9 2 0 0 2 2 2 1 Piccolo Zn-finger HypA PF01155.19 gi|73669473|ref|YP_305488.1| - 0.13 12.3 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|73669473|ref|YP_305488.1| - 0.15 12.1 0.6 0.29 11.2 0.6 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-RanBP PF00641.18 gi|73669473|ref|YP_305488.1| - 2.8 7.4 7.7 8.4 5.8 0.3 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others DrsE PF02635.15 gi|73669474|ref|YP_305489.1| - 1.1e-10 41.9 0.0 1.3e-10 41.7 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|73669474|ref|YP_305489.1| - 6.1e-10 39.2 0.1 6.6e-10 39.1 0.1 1.1 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family tRNA-synt_1 PF00133.22 gi|73669475|ref|YP_305490.1| - 5.4e-134 447.7 2.9 8e-133 443.8 2.9 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|73669475|ref|YP_305490.1| - 4.9e-38 130.5 0.0 9.5e-38 129.5 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|73669475|ref|YP_305490.1| - 5.5e-22 78.1 0.1 5.5e-13 48.4 0.0 3.0 3 1 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|73669475|ref|YP_305490.1| - 3.9e-06 26.4 0.0 0.02 14.3 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|73669475|ref|YP_305490.1| - 8.6e-06 25.4 0.0 5.4e-05 22.8 0.0 2.0 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 BPD_transp_1 PF00528.22 gi|73669476|ref|YP_305491.1| - 6.2e-23 81.5 10.2 6.2e-23 81.5 10.2 2.1 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|73669476|ref|YP_305491.1| - 0.0018 18.2 0.0 0.0018 18.2 0.0 3.0 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C Sigma_reg_N PF13800.6 gi|73669476|ref|YP_305491.1| - 0.11 12.8 3.0 6.9 7.0 0.0 2.6 2 0 0 2 2 2 0 Sigma factor regulator N-terminal BPD_transp_1 PF00528.22 gi|73669477|ref|YP_305492.1| - 9e-41 139.6 12.8 9e-41 139.6 12.8 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2484 PF10658.9 gi|73669477|ref|YP_305492.1| - 0.2 12.0 0.3 0.2 12.0 0.3 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2484) SBP_bac_5 PF00496.22 gi|73669478|ref|YP_305493.1| - 3.6e-104 348.7 2.2 4.8e-104 348.3 2.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle ABC_tran PF00005.27 gi|73669479|ref|YP_305494.1| - 5.1e-31 108.0 0.0 6.7e-31 107.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669479|ref|YP_305494.1| - 8.6e-07 29.0 0.8 0.0036 17.2 0.3 2.8 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73669479|ref|YP_305494.1| - 0.00024 21.4 1.4 0.0094 16.2 1.4 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73669479|ref|YP_305494.1| - 0.00033 21.1 0.6 0.00065 20.1 0.6 1.6 1 1 0 1 1 1 1 AAA ATPase domain oligo_HPY PF08352.12 gi|73669479|ref|YP_305494.1| - 0.0016 18.9 2.3 0.0098 16.4 2.3 2.2 1 1 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|73669479|ref|YP_305494.1| - 0.0019 17.6 0.0 0.05 13.0 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73669479|ref|YP_305494.1| - 0.002 17.9 0.0 0.0036 17.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain TniB PF05621.11 gi|73669479|ref|YP_305494.1| - 0.0034 16.8 0.0 0.18 11.2 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein RsgA_GTPase PF03193.16 gi|73669479|ref|YP_305494.1| - 0.011 15.6 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_25 PF13481.6 gi|73669479|ref|YP_305494.1| - 0.015 14.9 0.1 0.37 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|73669479|ref|YP_305494.1| - 0.02 14.3 0.0 0.056 12.8 0.0 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|73669479|ref|YP_305494.1| - 0.05 13.6 0.1 0.096 12.7 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) G-alpha PF00503.20 gi|73669479|ref|YP_305494.1| - 0.062 12.4 0.0 0.073 12.2 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_33 PF13671.6 gi|73669479|ref|YP_305494.1| - 0.17 12.1 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|73669479|ref|YP_305494.1| - 0.18 11.5 0.0 0.32 10.7 0.0 1.4 2 0 0 2 2 2 0 AAA ATPase domain ABC_tran PF00005.27 gi|73669480|ref|YP_305495.1| - 1.3e-19 71.1 0.0 1.7e-19 70.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|73669480|ref|YP_305495.1| - 7.9e-13 48.7 0.0 1.4e-12 48.0 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_29 PF13555.6 gi|73669480|ref|YP_305495.1| - 0.0029 17.3 0.0 0.0057 16.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|73669480|ref|YP_305495.1| - 0.014 15.7 0.0 0.17 12.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 gi|73669480|ref|YP_305495.1| - 0.017 14.5 0.0 0.063 12.7 0.0 1.8 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73669480|ref|YP_305495.1| - 0.022 14.6 6.9 0.2 11.4 0.0 2.6 2 1 1 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system IstB_IS21 PF01695.17 gi|73669480|ref|YP_305495.1| - 0.029 14.1 0.0 0.3 10.8 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_16 PF13191.6 gi|73669480|ref|YP_305495.1| - 0.061 13.7 0.0 0.19 12.1 0.0 1.8 2 1 0 2 2 2 0 AAA ATPase domain Methyltransf_25 PF13649.6 gi|73669481|ref|YP_305496.1| - 3.5e-10 40.5 0.0 7.4e-10 39.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669481|ref|YP_305496.1| - 1.5e-07 31.3 0.0 2.4e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669481|ref|YP_305496.1| - 5.7e-07 30.1 0.0 1.2e-06 29.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|73669481|ref|YP_305496.1| - 2.1e-05 23.7 0.0 4.5e-05 22.7 0.0 1.5 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltransf_23 PF13489.6 gi|73669481|ref|YP_305496.1| - 2.2e-05 24.4 0.0 3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73669481|ref|YP_305496.1| - 4.3e-05 24.2 0.0 0.00012 22.8 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain GidB PF02527.15 gi|73669481|ref|YP_305496.1| - 5.9e-05 22.5 0.0 0.00016 21.0 0.0 1.7 2 0 0 2 2 2 1 rRNA small subunit methyltransferase G MTS PF05175.14 gi|73669481|ref|YP_305496.1| - 6.2e-05 22.6 0.0 0.00011 21.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain DREV PF05219.12 gi|73669481|ref|YP_305496.1| - 0.011 14.9 0.0 0.016 14.3 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase Ubie_methyltran PF01209.18 gi|73669481|ref|YP_305496.1| - 0.013 14.9 0.0 0.02 14.3 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_16 PF10294.9 gi|73669481|ref|YP_305496.1| - 0.018 14.8 0.0 0.35 10.6 0.0 2.1 1 1 1 2 2 2 0 Lysine methyltransferase PP_kinase_C_1 PF17941.1 gi|73669481|ref|YP_305496.1| - 0.027 14.0 0.1 1.3 8.5 0.0 2.2 2 0 0 2 2 2 0 Polyphosphate kinase C-terminal domain 1 DUF938 PF06080.12 gi|73669481|ref|YP_305496.1| - 0.035 13.9 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltr_RsmB-F PF01189.17 gi|73669481|ref|YP_305496.1| - 0.12 12.0 0.0 0.38 10.4 0.0 1.7 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F BEN PF10523.9 gi|73669481|ref|YP_305496.1| - 0.13 12.5 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 BEN domain Methyltransf_15 PF09445.10 gi|73669481|ref|YP_305496.1| - 0.15 11.6 0.0 0.31 10.6 0.0 1.5 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|73669482|ref|YP_305497.1| - 1.1e-07 32.5 0.0 2.1e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73669482|ref|YP_305497.1| - 1.3e-05 25.1 0.0 1.9e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669482|ref|YP_305497.1| - 2.6e-05 24.8 0.0 4.7e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|73669482|ref|YP_305497.1| - 0.00013 21.5 0.0 0.00018 20.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_12 PF08242.12 gi|73669482|ref|YP_305497.1| - 0.00084 20.0 0.0 0.0016 19.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669482|ref|YP_305497.1| - 0.0011 18.8 0.0 0.0019 18.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|73669482|ref|YP_305497.1| - 0.0012 18.0 0.0 0.0017 17.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase NodS PF05401.11 gi|73669482|ref|YP_305497.1| - 0.0012 18.5 0.0 0.0017 18.0 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) GFP PF01353.22 gi|73669482|ref|YP_305497.1| - 0.0018 17.8 0.0 0.0027 17.2 0.0 1.2 1 0 0 1 1 1 1 Green fluorescent protein Methyltransf_16 PF10294.9 gi|73669482|ref|YP_305497.1| - 0.026 14.3 0.0 0.036 13.8 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase tRNA_U5-meth_tr PF05958.11 gi|73669482|ref|YP_305497.1| - 0.044 12.8 0.0 0.064 12.2 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Met_10 PF02475.16 gi|73669482|ref|YP_305497.1| - 0.044 13.5 0.0 0.077 12.7 0.0 1.4 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_15 PF09445.10 gi|73669482|ref|YP_305497.1| - 0.054 13.1 0.0 0.078 12.5 0.0 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase NOGCT PF08155.11 gi|73669482|ref|YP_305497.1| - 0.091 12.8 0.4 0.23 11.5 0.4 1.6 1 0 0 1 1 1 0 NOGCT (NUC087) domain DREV PF05219.12 gi|73669482|ref|YP_305497.1| - 0.098 11.7 0.0 0.14 11.3 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase MTS PF05175.14 gi|73669482|ref|YP_305497.1| - 0.1 12.1 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain DUF938 PF06080.12 gi|73669482|ref|YP_305497.1| - 0.17 11.6 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_4 PF02390.17 gi|73669482|ref|YP_305497.1| - 0.19 11.2 0.0 0.29 10.6 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase HAD_2 PF13419.6 gi|73669483|ref|YP_305498.1| - 1.2e-13 51.5 0.0 1.8e-13 51.0 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73669483|ref|YP_305498.1| - 5.9e-05 23.5 0.0 6.8e-05 23.3 0.0 1.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|73669483|ref|YP_305498.1| - 0.011 15.7 0.0 0.018 15.1 0.0 1.2 1 0 0 1 1 1 0 HAD-hyrolase-like Put_Phosphatase PF06888.12 gi|73669483|ref|YP_305498.1| - 0.053 12.9 0.6 0.69 9.3 0.0 2.3 1 1 0 2 2 2 0 Putative Phosphatase APH PF01636.23 gi|73669484|ref|YP_305499.1| - 2e-06 27.9 0.0 3.4e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 gi|73669484|ref|YP_305499.1| - 0.065 12.8 0.2 8.8 5.9 0.3 2.3 1 1 0 2 2 2 0 RIO1 family Acetyltransf_7 PF13508.7 gi|73669485|ref|YP_305500.1| - 3.3e-10 40.2 0.1 4.9e-10 39.7 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73669485|ref|YP_305500.1| - 3.8e-08 33.3 0.1 5e-08 32.9 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73669485|ref|YP_305500.1| - 5.7e-08 33.0 0.0 7.1e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_CG PF14542.6 gi|73669485|ref|YP_305500.1| - 9e-05 22.5 0.0 0.00014 21.9 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|73669485|ref|YP_305500.1| - 0.00048 20.2 0.1 0.0012 18.9 0.1 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73669485|ref|YP_305500.1| - 0.00053 19.9 0.0 0.00092 19.1 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 gi|73669485|ref|YP_305500.1| - 0.0068 15.8 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase 2 APH PF01636.23 gi|73669486|ref|YP_305501.1| - 1.6e-26 93.7 0.0 2e-26 93.4 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Fructosamin_kin PF03881.14 gi|73669486|ref|YP_305501.1| - 0.0053 16.0 0.0 0.0082 15.4 0.0 1.3 1 0 0 1 1 1 1 Fructosamine kinase DDE_Tnp_1 PF01609.21 gi|73669487|ref|YP_305502.1| - 3.3e-09 36.7 0.7 5.4e-09 36.0 0.7 1.3 1 0 0 1 1 1 1 Transposase DDE domain CagX PF03524.15 gi|73669487|ref|YP_305502.1| - 0.024 14.4 0.3 0.03 14.1 0.3 1.2 1 0 0 1 1 1 0 Conjugal transfer protein PQQ_2 PF13360.6 gi|73669488|ref|YP_305503.1| - 4.4e-70 235.9 16.9 2.9e-19 69.6 0.1 6.2 2 2 4 6 6 6 6 PQQ-like domain PKD PF00801.20 gi|73669488|ref|YP_305503.1| - 1.1e-62 207.8 41.4 3.3e-13 49.3 1.1 6.2 6 0 0 6 6 5 5 PKD domain PQQ_3 PF13570.6 gi|73669488|ref|YP_305503.1| - 2.8e-53 177.1 64.5 5.6e-07 29.9 0.1 16.3 16 1 0 16 16 16 11 PQQ-like domain PQQ PF01011.21 gi|73669488|ref|YP_305503.1| - 1.1e-38 129.4 34.8 2.2e-06 27.3 0.0 12.9 13 0 0 13 13 13 10 PQQ enzyme repeat MG2 PF01835.19 gi|73669488|ref|YP_305503.1| - 2.9e-08 34.1 14.4 0.84 10.1 0.2 6.4 3 1 3 6 6 6 4 MG2 domain PKD_3 PF16820.5 gi|73669488|ref|YP_305503.1| - 0.0014 18.3 13.6 0.49 10.2 0.3 5.4 6 0 0 6 6 6 2 PKD-like domain DUF1935 PF09149.10 gi|73669488|ref|YP_305503.1| - 0.022 15.1 0.4 0.096 13.1 0.1 2.2 2 0 0 2 2 1 0 Domain of unknown function (DUF1935) WW PF00397.26 gi|73669488|ref|YP_305503.1| - 0.023 14.8 0.6 1.3 9.2 0.1 4.2 3 0 0 3 3 3 0 WW domain DUF3324 PF11797.8 gi|73669488|ref|YP_305503.1| - 0.076 13.0 12.6 9.9 6.1 0.1 5.1 5 0 0 5 5 5 0 Protein of unknown function C-terminal (DUF3324) Big_4 PF07532.11 gi|73669488|ref|YP_305503.1| - 0.43 10.4 24.1 4.3 7.2 0.3 7.2 6 0 0 6 6 6 0 Bacterial Ig-like domain (group 4) EF-hand_6 PF13405.6 gi|73669488|ref|YP_305503.1| - 0.87 9.7 4.1 27 5.0 0.2 3.9 3 0 0 3 3 3 0 EF-hand domain EF-hand_1 PF00036.32 gi|73669488|ref|YP_305503.1| - 3.5 7.4 4.1 33 4.3 0.2 3.2 3 0 0 3 3 3 0 EF hand Kelch_6 PF13964.6 gi|73669488|ref|YP_305503.1| - 3.5 8.0 9.6 1.5 9.2 0.1 5.3 5 1 0 5 5 5 0 Kelch motif LRR_5 PF13306.6 gi|73669489|ref|YP_305504.1| - 7.6e-130 426.8 20.2 7.8e-44 148.7 4.2 4.4 3 1 1 4 4 4 4 BspA type Leucine rich repeat region (6 copies) PKD PF00801.20 gi|73669489|ref|YP_305504.1| - 4e-97 318.1 82.6 2.3e-14 53.0 4.1 10.2 10 0 0 10 10 10 9 PKD domain PQQ_2 PF13360.6 gi|73669489|ref|YP_305504.1| - 6.6e-25 88.1 0.4 3.3e-14 53.0 0.6 2.6 1 1 1 2 2 2 2 PQQ-like domain PQQ_3 PF13570.6 gi|73669489|ref|YP_305504.1| - 2.3e-23 82.0 40.3 1.1e-06 28.9 0.3 9.3 8 0 0 8 8 8 7 PQQ-like domain LRR_8 PF13855.6 gi|73669489|ref|YP_305504.1| - 8.9e-16 57.4 0.0 0.037 13.8 0.0 8.6 5 3 5 10 10 10 4 Leucine rich repeat PQQ PF01011.21 gi|73669489|ref|YP_305504.1| - 1.7e-13 49.8 21.0 0.00019 21.2 0.1 7.5 7 0 0 7 7 7 3 PQQ enzyme repeat PKD_3 PF16820.5 gi|73669489|ref|YP_305504.1| - 9.9e-10 38.0 25.3 0.23 11.3 0.3 8.6 8 0 0 8 8 8 5 PKD-like domain MG2 PF01835.19 gi|73669489|ref|YP_305504.1| - 4e-05 24.0 17.6 2.9 8.4 0.1 7.3 5 1 2 7 7 7 2 MG2 domain DUF2381 PF09544.10 gi|73669489|ref|YP_305504.1| - 0.0023 17.5 0.9 5.9 6.3 0.0 4.2 4 0 0 4 4 4 1 Protein of unknown function (DUF2381) A2M PF00207.22 gi|73669489|ref|YP_305504.1| - 3.8 7.4 16.1 73 3.3 0.2 7.7 5 2 4 9 9 9 0 Alpha-2-macroglobulin family DUF3324 PF11797.8 gi|73669489|ref|YP_305504.1| - 5 7.1 16.3 14 5.7 0.2 5.7 7 0 0 7 7 7 0 Protein of unknown function C-terminal (DUF3324) PQQ_2 PF13360.6 gi|73669490|ref|YP_305505.1| - 6.3e-47 160.2 1.0 3e-14 53.2 0.0 6.9 2 2 4 6 6 6 5 PQQ-like domain PQQ_3 PF13570.6 gi|73669490|ref|YP_305505.1| - 2.4e-40 136.0 44.1 1.4e-06 28.6 1.0 14.9 14 1 0 14 14 14 10 PQQ-like domain PQQ PF01011.21 gi|73669490|ref|YP_305505.1| - 1.8e-27 93.9 14.2 0.0011 18.8 0.2 12.1 12 0 0 12 12 12 6 PQQ enzyme repeat PKD PF00801.20 gi|73669490|ref|YP_305505.1| - 1.3e-26 92.2 38.9 5.6e-10 38.9 7.9 5.8 7 0 0 7 7 7 3 PKD domain CARDB PF07705.11 gi|73669490|ref|YP_305505.1| - 2.9e-23 82.1 4.8 2.9e-23 82.1 4.8 5.1 4 1 1 5 5 5 1 CARDB Y_Y_Y PF07495.13 gi|73669490|ref|YP_305505.1| - 0.018 15.0 0.0 0.11 12.5 0.0 2.4 1 0 0 1 1 1 0 Y_Y_Y domain DUF4905 PF16248.5 gi|73669490|ref|YP_305505.1| - 0.091 12.7 0.1 7 6.6 0.0 3.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4905) PKD_3 PF16820.5 gi|73669490|ref|YP_305505.1| - 0.13 12.1 15.0 0.37 10.6 0.3 4.5 4 0 0 4 4 4 0 PKD-like domain FlgD_ig PF13860.6 gi|73669490|ref|YP_305505.1| - 0.85 9.5 14.3 2.8 7.9 0.5 5.1 4 1 0 4 4 4 0 FlgD Ig-like domain MG2 PF01835.19 gi|73669490|ref|YP_305505.1| - 0.92 10.0 4.5 1.3 9.5 0.5 3.1 3 1 0 3 3 3 0 MG2 domain PQQ_3 PF13570.6 gi|73669491|ref|YP_305506.1| - 3.7e-14 52.7 37.1 0.0039 17.6 0.1 7.9 8 0 0 8 8 8 5 PQQ-like domain PQQ_2 PF13360.6 gi|73669491|ref|YP_305506.1| - 1.5e-13 50.9 0.5 6.7e-07 29.1 0.1 2.9 1 1 0 2 2 2 2 PQQ-like domain PQQ PF01011.21 gi|73669491|ref|YP_305506.1| - 0.47 10.5 12.6 0.74 9.9 0.3 5.4 5 2 0 5 5 5 0 PQQ enzyme repeat PKD PF00801.20 gi|73669492|ref|YP_305507.1| - 3e-86 283.3 67.0 5.5e-14 51.8 5.7 8.3 8 0 0 8 8 8 7 PKD domain PQQ_3 PF13570.6 gi|73669492|ref|YP_305507.1| - 1.2e-73 241.9 54.6 2e-08 34.4 0.0 17.5 17 0 0 17 17 17 14 PQQ-like domain PQQ_2 PF13360.6 gi|73669492|ref|YP_305507.1| - 4.7e-64 216.2 3.0 7.6e-23 81.3 0.2 7.3 2 2 2 6 6 6 6 PQQ-like domain NosD PF05048.13 gi|73669492|ref|YP_305507.1| - 1.9e-54 184.5 58.4 4.1e-33 114.6 29.4 3.4 3 0 0 3 3 3 2 Periplasmic copper-binding protein (NosD) PQQ PF01011.21 gi|73669492|ref|YP_305507.1| - 7.1e-35 117.3 33.1 0.0014 18.5 0.0 14.4 14 0 0 14 14 14 10 PQQ enzyme repeat Beta_helix PF13229.6 gi|73669492|ref|YP_305507.1| - 4.1e-17 62.5 57.9 4e-08 33.3 7.6 4.1 2 1 1 3 3 3 3 Right handed beta helix region MG2 PF01835.19 gi|73669492|ref|YP_305507.1| - 1.7e-09 38.0 18.8 0.083 13.4 0.2 7.0 4 2 3 7 7 7 4 MG2 domain PKD_3 PF16820.5 gi|73669492|ref|YP_305507.1| - 7.8e-05 22.4 17.7 0.39 10.5 0.2 6.8 7 0 0 7 7 7 2 PKD-like domain DUF2381 PF09544.10 gi|73669492|ref|YP_305507.1| - 0.049 13.2 1.2 31 4.0 0.0 4.2 4 0 0 4 4 4 0 Protein of unknown function (DUF2381) SoxZ PF08770.11 gi|73669492|ref|YP_305507.1| - 5.2 6.9 7.8 17 5.3 0.1 4.5 4 0 0 4 4 4 0 Sulphur oxidation protein SoxZ LRR_5 PF13306.6 gi|73669494|ref|YP_305509.1| - 5.5e-188 614.8 43.1 1.4e-38 131.8 5.1 7.5 1 1 6 7 7 7 7 BspA type Leucine rich repeat region (6 copies) PKD PF00801.20 gi|73669494|ref|YP_305509.1| - 5.5e-96 314.5 83.0 1.6e-14 53.5 3.7 10.2 10 0 0 10 10 10 8 PKD domain LRR_8 PF13855.6 gi|73669494|ref|YP_305509.1| - 2.1e-35 120.3 0.0 0.0022 17.7 0.0 13.0 8 3 8 16 16 16 10 Leucine rich repeat LRR_4 PF12799.7 gi|73669494|ref|YP_305509.1| - 1e-14 54.4 0.0 0.17 12.4 0.0 10.1 8 1 4 12 12 12 4 Leucine Rich repeats (2 copies) PKD_3 PF16820.5 gi|73669494|ref|YP_305509.1| - 1.2e-10 41.0 22.3 0.094 12.5 0.3 8.8 9 0 0 9 9 9 4 PKD-like domain MG2 PF01835.19 gi|73669494|ref|YP_305509.1| - 3.5e-08 33.8 23.1 2.8 8.5 0.1 8.2 6 2 3 9 9 8 5 MG2 domain bMG10 PF17973.1 gi|73669494|ref|YP_305509.1| - 0.016 15.4 0.4 0.082 13.1 0.0 2.4 2 0 0 2 2 1 0 Bacterial Alpha-2-macroglobulin MG10 domain MitoNEET_N PF10660.9 gi|73669494|ref|YP_305509.1| - 0.026 14.5 0.6 85 3.3 0.0 6.1 8 1 1 9 9 7 0 Iron-containing outer mitochondrial membrane protein N-terminus DUF2381 PF09544.10 gi|73669494|ref|YP_305509.1| - 0.033 13.7 0.3 55 3.1 0.0 4.4 4 0 0 4 4 4 0 Protein of unknown function (DUF2381) Big_4 PF07532.11 gi|73669494|ref|YP_305509.1| - 0.22 11.3 27.4 11 5.9 0.1 9.1 8 0 0 8 8 8 0 Bacterial Ig-like domain (group 4) DUF4307 PF14155.6 gi|73669494|ref|YP_305509.1| - 0.8 9.6 4.2 0.79 9.6 0.1 3.2 4 0 0 4 4 4 0 Domain of unknown function (DUF4307) SoxZ PF08770.11 gi|73669494|ref|YP_305509.1| - 0.93 9.3 6.6 20 5.1 0.1 4.3 4 0 0 4 4 4 0 Sulphur oxidation protein SoxZ DUF3324 PF11797.8 gi|73669494|ref|YP_305509.1| - 2.9 7.9 22.6 13 5.7 0.2 7.1 8 0 0 8 8 8 0 Protein of unknown function C-terminal (DUF3324) SSB PF00436.25 gi|73669494|ref|YP_305509.1| - 4.3 7.4 14.7 8.2 6.5 0.1 5.7 6 0 0 6 6 6 0 Single-strand binding protein family Y_Y_Y PF07495.13 gi|73669494|ref|YP_305509.1| - 6 6.9 36.0 5.6 7.0 0.5 8.0 8 0 0 8 8 8 0 Y_Y_Y domain Mrr_cat PF04471.12 gi|73669495|ref|YP_305510.1| - 5e-27 94.2 0.2 9.9e-27 93.2 0.2 1.5 1 0 0 1 1 1 1 Restriction endonuclease zinc_ribbon_15 PF17032.5 gi|73669495|ref|YP_305510.1| - 0.0065 17.2 3.6 0.0065 17.2 3.6 2.7 2 1 0 2 2 2 1 zinc-ribbon family zf-C2HC5 PF06221.13 gi|73669495|ref|YP_305510.1| - 0.015 15.2 5.8 0.033 14.2 5.8 1.5 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type zinc_ribbon_2 PF13240.6 gi|73669495|ref|YP_305510.1| - 0.044 13.5 0.7 0.044 13.5 0.7 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Fe-S_biosyn PF01521.20 gi|73669495|ref|YP_305510.1| - 0.053 13.7 0.1 0.053 13.7 0.1 2.3 3 0 0 3 3 3 0 Iron-sulphur cluster biosynthesis DZR PF12773.7 gi|73669495|ref|YP_305510.1| - 0.11 12.6 7.3 0.27 11.3 7.3 1.7 1 0 0 1 1 1 0 Double zinc ribbon FYVE PF01363.21 gi|73669495|ref|YP_305510.1| - 0.15 12.2 11.6 0.59 10.3 11.6 2.0 1 1 0 1 1 1 0 FYVE zinc finger zf-UBP PF02148.19 gi|73669495|ref|YP_305510.1| - 0.23 11.8 7.7 0.53 10.6 7.7 1.6 1 0 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein zf-UDP PF14569.6 gi|73669495|ref|YP_305510.1| - 0.31 11.2 4.4 1 9.5 4.4 1.9 1 0 0 1 1 1 0 Zinc-binding RING-finger Siva PF05458.12 gi|73669495|ref|YP_305510.1| - 0.44 10.2 5.3 0.52 10.0 2.8 2.0 2 0 0 2 2 2 0 Cd27 binding protein (Siva) C1_2 PF03107.16 gi|73669495|ref|YP_305510.1| - 1.1 9.6 7.5 1 9.8 5.2 2.1 2 0 0 2 2 2 0 C1 domain zf-AN1 PF01428.16 gi|73669495|ref|YP_305510.1| - 2.2 8.5 7.0 4.5 7.5 5.8 2.2 2 0 0 2 2 2 0 AN1-like Zinc finger DUF2989 PF11207.8 gi|73669496|ref|YP_305511.1| - 0.062 13.1 2.2 1.2 8.9 0.0 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2989) Cnd1_N PF12922.7 gi|73669496|ref|YP_305511.1| - 0.52 10.2 4.6 0.39 10.6 2.4 1.8 2 0 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1, N-term Acetyltransf_10 PF13673.7 gi|73669497|ref|YP_305512.1| - 1.4e-16 60.6 0.0 1.6e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73669497|ref|YP_305512.1| - 3.5e-15 56.2 0.2 4.8e-15 55.7 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73669497|ref|YP_305512.1| - 3.8e-12 46.5 0.1 5.3e-12 46.0 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|73669497|ref|YP_305512.1| - 0.00032 21.4 0.0 0.00046 20.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73669497|ref|YP_305512.1| - 0.0026 17.7 0.0 0.0071 16.3 0.0 1.7 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|73669497|ref|YP_305512.1| - 0.05 13.7 0.1 8.1 6.5 0.0 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain DUF5502 PF17606.2 gi|73669497|ref|YP_305512.1| - 0.1 13.3 0.0 0.19 12.5 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5502) Pentapeptide_4 PF13599.6 gi|73669498|ref|YP_305513.1| - 8.7e-05 22.6 2.5 0.00014 22.0 2.5 1.4 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) Diphthami_syn_2 PF01902.17 gi|73669498|ref|YP_305513.1| - 0.00027 20.5 0.0 0.00044 19.8 0.0 1.3 1 0 0 1 1 1 1 Diphthamide synthase DUF4241 PF14025.6 gi|73669498|ref|YP_305513.1| - 0.0031 17.8 0.1 0.0037 17.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4241) CfAFP PF05264.11 gi|73669498|ref|YP_305513.1| - 0.0032 17.5 8.3 0.0044 17.0 8.3 1.2 1 0 0 1 1 1 1 Choristoneura fumiferana antifreeze protein (CfAFP) Pentapeptide PF00805.22 gi|73669498|ref|YP_305513.1| - 0.61 9.8 3.9 3.5 7.4 2.1 2.1 1 1 0 1 1 1 0 Pentapeptide repeats (8 copies) Nuc_deoxyrib_tr PF05014.15 gi|73669499|ref|YP_305514.1| - 7e-28 97.3 0.0 8e-28 97.1 0.0 1.0 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase Nuc_deoxyri_tr2 PF15891.5 gi|73669499|ref|YP_305514.1| - 4.4e-20 72.0 0.0 5.8e-20 71.6 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase like TIR_2 PF13676.6 gi|73669499|ref|YP_305514.1| - 0.0014 19.2 0.0 0.0023 18.5 0.0 1.4 1 1 0 1 1 1 1 TIR domain LDcluster4 PF18306.1 gi|73669499|ref|YP_305514.1| - 0.004 16.8 0.0 0.0058 16.2 0.0 1.3 1 0 0 1 1 1 1 SLOG cluster4 family DUF4406 PF14359.6 gi|73669499|ref|YP_305514.1| - 0.14 12.6 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4406) Semialdhyde_dh PF01118.24 gi|73669500|ref|YP_305515.1| - 7e-34 116.9 0.0 1.2e-33 116.1 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|73669500|ref|YP_305515.1| - 6e-23 81.9 0.0 8e-23 81.5 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain F420_oxidored PF03807.17 gi|73669500|ref|YP_305515.1| - 0.024 15.2 0.0 0.047 14.3 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 gi|73669500|ref|YP_305515.1| - 0.11 13.3 0.0 0.26 12.1 0.0 1.6 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold CBS PF00571.28 gi|73669501|ref|YP_305516.1| - 9.8e-34 115.6 3.6 6.6e-16 58.5 0.6 2.1 2 0 0 2 2 2 2 CBS domain ArgJ PF01960.18 gi|73669502|ref|YP_305517.1| - 1.4e-132 442.0 4.8 1.6e-132 441.8 4.8 1.0 1 0 0 1 1 1 1 ArgJ family ADP_PFK_GK PF04587.15 gi|73669503|ref|YP_305518.1| - 3.2e-112 375.2 0.0 3.6e-112 375.0 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region ADP_PFK_GK PF04587.15 gi|73669504|ref|YP_305519.1| - 1e-85 287.9 0.0 2.8e-85 286.5 0.0 1.6 1 1 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region OGG_N PF07934.12 gi|73669505|ref|YP_305520.1| - 4.2e-22 78.5 1.1 6.3e-21 74.7 1.1 2.3 1 1 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.25 gi|73669505|ref|YP_305520.1| - 1.3e-10 41.6 0.0 2.3e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|73669505|ref|YP_305520.1| - 0.0072 16.1 0.0 0.02 14.8 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF4405 PF14358.6 gi|73669506|ref|YP_305521.1| - 0.52 10.9 0.1 0.52 10.9 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4405) Metal_resist PF13801.6 gi|73669506|ref|YP_305521.1| - 1.4 9.1 3.6 2.8 8.2 3.6 1.8 1 1 0 1 1 1 0 Heavy-metal resistance LPG_synthase_TM PF03706.13 gi|73669507|ref|YP_305522.1| - 1.3e-47 162.8 22.0 1.6e-47 162.5 22.0 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Babuvirus_MP PF07234.11 gi|73669507|ref|YP_305522.1| - 0.2 11.8 3.1 2.8 8.1 0.1 2.6 2 0 0 2 2 2 0 Movement and RNA silencing protein Glyco_trans_1_3 PF13528.6 gi|73669508|ref|YP_305523.1| - 1.8e-15 57.0 0.0 2e-08 33.9 0.0 2.1 2 0 0 2 2 2 2 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.16 gi|73669508|ref|YP_305523.1| - 5.2e-13 49.3 0.0 8.3e-13 48.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_28 PF03033.20 gi|73669508|ref|YP_305523.1| - 1.5e-06 28.3 0.0 3.7e-06 27.0 0.0 1.7 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Glyco_transf_4 PF13439.6 gi|73669508|ref|YP_305523.1| - 8.8e-06 25.8 0.0 2.2e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 UDPGT PF00201.18 gi|73669508|ref|YP_305523.1| - 0.00016 20.7 0.0 0.0016 17.3 0.0 2.1 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_1_4 PF13692.6 gi|73669508|ref|YP_305523.1| - 0.00049 20.5 0.0 0.00092 19.6 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF354 PF04007.12 gi|73669508|ref|YP_305523.1| - 0.0013 17.8 0.0 0.0022 17.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glycos_transf_1 PF00534.20 gi|73669508|ref|YP_305523.1| - 0.0059 16.2 0.0 0.016 14.8 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|73669508|ref|YP_305523.1| - 0.0098 15.9 0.0 0.022 14.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like YjeF_N PF03853.15 gi|73669508|ref|YP_305523.1| - 0.12 12.3 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 YjeF-related protein N-terminus LAGLIDADG_3 PF14528.6 gi|73669508|ref|YP_305523.1| - 0.14 12.5 0.2 6.5 7.2 0.1 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain PAP2_3 PF14378.6 gi|73669509|ref|YP_305524.1| - 8.6e-15 54.9 17.5 5.6e-14 52.3 17.5 2.1 1 1 0 1 1 1 1 PAP2 superfamily PAP2 PF01569.21 gi|73669509|ref|YP_305524.1| - 2.4e-12 46.8 5.1 2.4e-12 46.8 5.1 2.3 1 1 0 2 2 2 1 PAP2 superfamily PAP2_C PF14360.6 gi|73669509|ref|YP_305524.1| - 1.2 9.7 13.2 0.063 13.8 5.4 2.5 2 0 0 2 2 2 0 PAP2 superfamily C-terminal Phage_holin_3_6 PF07332.11 gi|73669509|ref|YP_305524.1| - 1.2 9.2 11.4 0.44 10.6 0.2 2.5 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III Halogen_Hydrol PF10112.9 gi|73669509|ref|YP_305524.1| - 8.7 6.3 12.3 0.24 11.4 1.9 2.4 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein S-layer PF07752.11 gi|73669510|ref|YP_305525.1| - 7.3e-157 520.1 29.5 4.9e-79 265.0 12.9 2.1 2 0 0 2 2 2 2 S-layer protein PGF-CTERM PF18204.1 gi|73669510|ref|YP_305525.1| - 4.5e-07 29.6 0.0 8.3e-07 28.8 0.0 1.5 1 0 0 1 1 1 1 PGF-CTERM motif PmrD PF11183.8 gi|73669510|ref|YP_305525.1| - 0.035 14.2 0.2 1.5 9.0 0.0 2.6 2 0 0 2 2 2 0 Polymyxin resistance protein PmrD DUF2171 PF09939.9 gi|73669510|ref|YP_305525.1| - 0.088 13.1 12.5 13 6.1 0.1 5.5 4 2 2 6 6 6 0 Uncharacterized protein conserved in bacteria (DUF2171) Big_3_4 PF13754.6 gi|73669510|ref|YP_305525.1| - 0.11 12.3 3.4 5.2 6.8 0.3 2.6 2 0 0 2 2 2 0 Domain of unknown function Myb_DNA-bind_2 PF08914.11 gi|73669510|ref|YP_305525.1| - 0.13 12.5 0.1 28 5.0 0.0 2.6 2 0 0 2 2 2 0 Rap1 Myb domain tRNA-synt_1c_C PF03950.18 gi|73669510|ref|YP_305525.1| - 0.14 12.0 4.0 9.5 6.1 0.1 3.3 4 0 0 4 4 4 0 tRNA synthetases class I (E and Q), anti-codon binding domain MGC-24 PF05283.11 gi|73669510|ref|YP_305525.1| - 5.4 7.5 8.3 13 6.2 8.3 1.6 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin HTH_24 PF13412.6 gi|73669511|ref|YP_305526.1| - 4.3e-23 80.6 1.2 2.6e-14 52.5 0.1 3.2 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|73669511|ref|YP_305526.1| - 1.7e-13 50.2 0.3 2.1e-08 33.9 0.0 3.0 2 1 1 3 3 3 2 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|73669511|ref|YP_305526.1| - 1.3e-12 47.4 0.0 3.5e-07 30.0 0.0 2.6 2 1 0 2 2 2 2 MarR family HTH_20 PF12840.7 gi|73669511|ref|YP_305526.1| - 2e-12 47.0 0.0 4.2e-07 29.9 0.0 2.6 2 1 0 2 2 2 2 Helix-turn-helix domain MarR PF01047.22 gi|73669511|ref|YP_305526.1| - 9.6e-12 44.7 0.2 2.9e-07 30.3 0.0 2.6 2 1 1 3 3 2 2 MarR family TrmB PF01978.19 gi|73669511|ref|YP_305526.1| - 3.1e-08 33.4 0.0 3.2e-07 30.1 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 gi|73669511|ref|YP_305526.1| - 2e-07 30.9 0.1 9.8e-07 28.7 0.0 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_34 PF13601.6 gi|73669511|ref|YP_305526.1| - 7.2e-07 29.3 0.0 0.005 17.0 0.0 2.3 2 0 0 2 2 2 2 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|73669511|ref|YP_305526.1| - 6.7e-06 25.8 0.0 1.7e-05 24.5 0.0 1.7 2 0 0 2 2 1 1 IclR helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|73669511|ref|YP_305526.1| - 8.8e-06 25.5 0.0 5.9e-05 22.8 0.0 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain RP-C PF03428.13 gi|73669511|ref|YP_305526.1| - 2.6e-05 23.9 0.2 0.00097 18.8 0.0 2.1 2 0 0 2 2 2 1 Replication protein C N-terminal domain DUF4423 PF14394.6 gi|73669511|ref|YP_305526.1| - 2.8e-05 23.9 0.1 0.051 13.3 0.0 2.2 1 1 1 2 2 2 2 Domain of unknown function (DUF4423) Fe_dep_repress PF01325.19 gi|73669511|ref|YP_305526.1| - 0.00025 21.2 0.0 0.00079 19.6 0.0 1.9 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain LexA_DNA_bind PF01726.16 gi|73669511|ref|YP_305526.1| - 0.00053 19.7 0.3 0.049 13.4 0.0 2.8 3 0 0 3 3 3 1 LexA DNA binding domain Penicillinase_R PF03965.16 gi|73669511|ref|YP_305526.1| - 0.0011 19.3 0.1 0.021 15.2 0.0 2.3 1 1 1 2 2 2 1 Penicillinase repressor Rrf2 PF02082.20 gi|73669511|ref|YP_305526.1| - 0.0013 19.1 0.1 0.0083 16.5 0.0 2.3 2 1 1 3 3 3 1 Transcriptional regulator HTH_36 PF13730.6 gi|73669511|ref|YP_305526.1| - 0.0024 17.8 0.0 0.0067 16.4 0.0 1.9 2 1 0 2 2 1 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|73669511|ref|YP_305526.1| - 0.0026 17.5 0.0 0.0067 16.2 0.0 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain DUF2513 PF10711.9 gi|73669511|ref|YP_305526.1| - 0.0076 16.5 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 1 Hypothetical protein (DUF2513) HTH_45 PF14947.6 gi|73669511|ref|YP_305526.1| - 0.0099 15.8 0.2 0.67 10.0 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_23 PF13384.6 gi|73669511|ref|YP_305526.1| - 0.011 15.5 0.1 0.037 13.8 0.0 2.0 2 0 0 2 2 1 0 Homeodomain-like domain RepL PF05732.11 gi|73669511|ref|YP_305526.1| - 0.012 15.0 0.0 0.03 13.7 0.0 1.6 2 0 0 2 2 2 0 Firmicute plasmid replication protein (RepL) RPA_C PF08784.11 gi|73669511|ref|YP_305526.1| - 0.018 15.7 0.1 3.1 8.5 0.0 2.4 1 1 1 2 2 2 0 Replication protein A C terminal HTH_29 PF13551.6 gi|73669511|ref|YP_305526.1| - 0.019 15.0 0.0 0.049 13.6 0.0 1.8 1 1 1 2 2 2 0 Winged helix-turn helix HTH_Tnp_Tc3_2 PF01498.18 gi|73669511|ref|YP_305526.1| - 0.02 15.1 0.1 2.1 8.6 0.0 2.3 2 0 0 2 2 2 0 Transposase HTH_11 PF08279.12 gi|73669511|ref|YP_305526.1| - 0.022 14.7 0.2 0.15 12.1 0.0 2.2 2 0 0 2 2 2 0 HTH domain GerE PF00196.19 gi|73669511|ref|YP_305526.1| - 0.026 14.1 0.2 0.068 12.7 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family Phage_rep_O PF04492.13 gi|73669511|ref|YP_305526.1| - 0.036 14.6 0.2 0.09 13.4 0.0 1.9 2 1 0 2 2 1 0 Bacteriophage replication protein O HTH_41 PF14502.6 gi|73669511|ref|YP_305526.1| - 0.037 13.7 0.0 0.84 9.4 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Mrr_N PF14338.6 gi|73669511|ref|YP_305526.1| - 0.043 14.0 0.2 1.1 9.4 0.0 2.5 2 1 0 2 2 2 0 Mrr N-terminal domain TFIIE_alpha PF02002.17 gi|73669511|ref|YP_305526.1| - 0.045 13.6 0.0 0.11 12.3 0.0 1.7 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_27 PF13463.6 gi|73669511|ref|YP_305526.1| - 0.05 14.1 0.0 0.23 12.0 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_40 PF14493.6 gi|73669511|ref|YP_305526.1| - 0.064 13.7 0.1 0.29 11.6 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain FUR PF01475.19 gi|73669511|ref|YP_305526.1| - 0.086 13.0 0.0 0.54 10.4 0.0 2.2 1 1 1 2 2 2 0 Ferric uptake regulator family DprA_WH PF17782.1 gi|73669511|ref|YP_305526.1| - 0.096 12.8 0.0 18 5.6 0.0 2.4 2 1 0 2 2 2 0 DprA winged helix domain Crp PF00325.20 gi|73669511|ref|YP_305526.1| - 0.11 12.2 0.0 0.2 11.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family LacI PF00356.21 gi|73669511|ref|YP_305526.1| - 0.16 11.8 0.0 0.56 10.0 0.0 2.0 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family 7TMR-DISM_7TM PF07695.11 gi|73669512|ref|YP_305527.1| - 0.00012 22.1 3.4 0.00014 21.8 3.4 1.1 1 0 0 1 1 1 1 7TM diverse intracellular signalling MASE3 PF17159.4 gi|73669512|ref|YP_305527.1| - 0.0027 17.3 3.6 0.0042 16.7 3.6 1.4 1 1 0 1 1 1 1 Membrane-associated sensor domain HisKA_7TM PF16927.5 gi|73669512|ref|YP_305527.1| - 0.036 14.1 3.5 0.046 13.8 3.5 1.1 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase CBP_BcsF PF11120.8 gi|73669512|ref|YP_305527.1| - 2.1 8.5 5.5 0.7 10.1 1.2 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsF DUF4131 PF13567.6 gi|73669512|ref|YP_305527.1| - 3.4 7.3 7.5 0.38 10.4 2.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) tRNA_NucTransf2 PF09249.11 gi|73669513|ref|YP_305528.1| - 3e-45 153.1 0.0 6.8e-45 151.9 0.0 1.6 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|73669513|ref|YP_305528.1| - 4.1e-12 46.2 0.0 1.2e-11 44.8 0.0 1.8 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|73669513|ref|YP_305528.1| - 0.014 15.6 0.0 0.028 14.6 0.0 1.4 1 0 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain DNA_pol_B_palm PF14792.6 gi|73669513|ref|YP_305528.1| - 0.083 13.1 0.0 0.24 11.6 0.0 1.8 1 0 0 1 1 1 0 DNA polymerase beta palm S-layer PF07752.11 gi|73669515|ref|YP_305530.1| - 2.7e-199 659.1 24.3 3.5e-102 340.9 10.7 2.4 2 0 0 2 2 2 2 S-layer protein CarbopepD_reg_2 PF13715.6 gi|73669515|ref|YP_305530.1| - 8.8e-11 41.7 14.6 1.1e-06 28.5 1.2 4.2 5 0 0 5 5 5 2 CarboxypepD_reg-like domain CarboxypepD_reg PF13620.6 gi|73669515|ref|YP_305530.1| - 8.5e-10 38.8 14.5 1.8e-06 28.1 2.5 4.3 3 1 1 4 4 4 2 Carboxypeptidase regulatory-like domain PEGA PF08308.11 gi|73669515|ref|YP_305530.1| - 1.5e-05 24.8 5.6 0.07 13.0 0.2 3.9 4 0 0 4 4 4 2 PEGA domain YtkA PF13115.6 gi|73669515|ref|YP_305530.1| - 5.6e-05 23.7 3.1 0.001 19.6 0.5 3.6 3 0 0 3 3 3 1 YtkA-like DUF4198 PF10670.9 gi|73669515|ref|YP_305530.1| - 0.00045 20.7 3.2 0.29 11.5 0.1 3.5 3 0 0 3 3 3 1 Domain of unknown function (DUF4198) tRNA-synt_1c_C PF03950.18 gi|73669515|ref|YP_305530.1| - 0.00065 19.6 1.4 3.9 7.3 0.0 4.0 4 0 0 4 4 4 2 tRNA synthetases class I (E and Q), anti-codon binding domain Cupredoxin_1 PF13473.6 gi|73669515|ref|YP_305530.1| - 0.0039 17.3 0.9 0.048 13.8 0.4 3.1 3 0 0 3 3 3 1 Cupredoxin-like domain Big_7 PF17957.1 gi|73669515|ref|YP_305530.1| - 0.021 15.6 1.8 0.021 15.6 1.8 5.6 4 1 2 6 6 6 0 Bacterial Ig domain Myb_DNA-bind_2 PF08914.11 gi|73669515|ref|YP_305530.1| - 0.17 12.1 0.2 8 6.7 0.0 2.4 2 0 0 2 2 2 0 Rap1 Myb domain DUF756 PF05506.12 gi|73669515|ref|YP_305530.1| - 0.71 10.8 3.1 3.1 8.8 0.1 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF756) SNARE_assoc PF09335.11 gi|73669516|ref|YP_305531.1| - 8.6e-15 55.3 4.5 8.6e-15 55.3 4.5 1.6 1 1 1 2 2 2 1 SNARE associated Golgi protein Sm_multidrug_ex PF06695.11 gi|73669516|ref|YP_305531.1| - 0.00074 20.1 0.5 0.0012 19.5 0.4 1.4 1 1 0 1 1 1 1 Putative small multi-drug export protein Disaggr_assoc PF08480.10 gi|73669518|ref|YP_305533.1| - 2e-62 210.4 13.8 2e-62 210.4 13.8 3.0 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|73669518|ref|YP_305533.1| - 1.2e-14 54.4 54.8 6.6e-11 42.3 22.0 2.7 1 1 1 2 2 2 2 Right handed beta helix region DUF5123 PF17161.4 gi|73669518|ref|YP_305533.1| - 0.91 10.6 13.7 2.6 9.1 7.0 3.5 1 1 2 3 3 3 0 Domain of unknown function (DUF5123) NTP_transferase PF00483.23 gi|73669519|ref|YP_305534.1| - 1.2e-44 152.7 0.0 1.8e-44 152.2 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|73669519|ref|YP_305534.1| - 1e-13 50.4 28.9 1.8e-08 33.8 5.0 5.0 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|73669519|ref|YP_305534.1| - 5.3e-12 46.4 0.0 6.3e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|73669519|ref|YP_305534.1| - 1.5e-05 24.8 0.0 0.00067 19.5 0.0 2.6 3 0 0 3 3 3 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Hexapep_2 PF14602.6 gi|73669519|ref|YP_305534.1| - 7.7e-05 22.4 20.1 0.00038 20.1 3.1 4.4 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 gi|73669519|ref|YP_305534.1| - 0.00064 18.0 0.1 0.00099 17.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Fucokinase PF07959.12 gi|73669519|ref|YP_305534.1| - 0.1 11.5 0.6 1.7 7.5 0.2 2.4 2 1 1 3 3 3 0 L-fucokinase PGM_PMM_I PF02878.16 gi|73669520|ref|YP_305535.1| - 9.1e-37 125.8 0.0 2e-36 124.8 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|73669520|ref|YP_305535.1| - 7.6e-29 100.4 0.1 2.1e-28 98.9 0.1 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|73669520|ref|YP_305535.1| - 1.6e-20 73.4 0.0 2.8e-20 72.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|73669520|ref|YP_305535.1| - 1.6e-10 41.0 0.1 3.5e-10 39.9 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain CinA_KH PF18146.1 gi|73669520|ref|YP_305535.1| - 0.015 15.4 0.3 6.7 7.0 0.0 2.7 2 0 0 2 2 2 0 Damage-inducible protein CinA KH domain Methyltransf_23 PF13489.6 gi|73669520|ref|YP_305535.1| - 0.069 13.0 0.0 0.44 10.4 0.0 2.3 2 1 0 2 2 2 0 Methyltransferase domain SIS PF01380.22 gi|73669521|ref|YP_305536.1| - 4.2e-59 198.1 0.7 3.7e-29 101.2 0.0 2.4 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|73669521|ref|YP_305536.1| - 2e-20 73.4 0.0 4.6e-20 72.2 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|73669521|ref|YP_305536.1| - 4.2e-16 59.0 0.0 1.1e-15 57.6 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|73669521|ref|YP_305536.1| - 0.00074 18.5 0.0 0.0013 17.7 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF5124 PF17160.4 gi|73669521|ref|YP_305536.1| - 0.015 16.1 0.0 0.039 14.7 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5124) NTP_transferase PF00483.23 gi|73669522|ref|YP_305537.1| - 1.2e-37 129.9 0.1 1.5e-37 129.6 0.1 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|73669522|ref|YP_305537.1| - 7.1e-16 57.2 22.5 4.3e-08 32.6 3.1 4.6 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|73669522|ref|YP_305537.1| - 2.1e-13 50.9 0.0 2.9e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|73669522|ref|YP_305537.1| - 6.9e-08 32.1 15.0 4.3e-05 23.2 4.2 4.4 3 1 2 5 5 5 3 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|73669522|ref|YP_305537.1| - 5.1e-06 26.4 0.0 2.9e-05 23.9 0.0 1.9 1 1 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISAV_HA PF06215.11 gi|73669522|ref|YP_305537.1| - 0.069 12.3 0.2 0.17 11.0 0.1 1.5 1 1 1 2 2 2 0 Infectious salmon anaemia virus haemagglutinin Pilin_N PF07790.11 gi|73669524|ref|YP_305539.1| - 0.11 13.4 0.2 0.3 12.0 0.2 1.8 1 0 0 1 1 1 0 Archaeal Type IV pilin, N-terminal tRNA_anti-codon PF01336.25 gi|73669525|ref|YP_305540.1| - 0.0046 16.9 0.2 0.29 11.2 0.0 3.0 2 1 1 3 3 3 2 OB-fold nucleic acid binding domain ABC_tran PF00005.27 gi|73669527|ref|YP_305542.1| - 1.3e-32 113.1 0.0 1.7e-32 112.8 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669527|ref|YP_305542.1| - 0.00016 21.6 2.2 0.092 12.5 0.3 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73669527|ref|YP_305542.1| - 0.0013 19.0 1.5 0.018 15.3 1.5 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|73669527|ref|YP_305542.1| - 0.0018 17.8 0.6 0.0075 15.7 0.6 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73669527|ref|YP_305542.1| - 0.0046 16.7 0.1 0.0093 15.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|73669527|ref|YP_305542.1| - 0.0079 16.6 0.2 0.013 15.9 0.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73669527|ref|YP_305542.1| - 0.0086 16.0 0.1 0.014 15.3 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase TniB PF05621.11 gi|73669527|ref|YP_305542.1| - 0.036 13.5 0.4 0.94 8.8 0.1 2.2 2 0 0 2 2 2 0 Bacterial TniB protein NB-ARC PF00931.22 gi|73669527|ref|YP_305542.1| - 0.066 12.4 0.1 0.12 11.6 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain ATP-synt_ab PF00006.25 gi|73669527|ref|YP_305542.1| - 0.13 11.9 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Mg_chelatase PF01078.21 gi|73669527|ref|YP_305542.1| - 0.13 11.6 0.0 0.41 10.0 0.0 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|73669527|ref|YP_305542.1| - 0.16 12.1 0.1 0.21 11.7 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|73669527|ref|YP_305542.1| - 0.16 12.0 0.1 0.32 11.0 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 gi|73669528|ref|YP_305543.1| - 5.8e-28 98.1 0.1 1.4e-27 96.8 0.0 1.7 2 0 0 2 2 2 1 ABC transporter oligo_HPY PF08352.12 gi|73669528|ref|YP_305543.1| - 1.5e-13 51.0 0.1 3.5e-13 49.8 0.1 1.7 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|73669528|ref|YP_305543.1| - 1e-07 32.1 0.9 0.013 15.4 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73669528|ref|YP_305543.1| - 0.00028 21.2 0.5 0.0016 18.7 0.5 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|73669528|ref|YP_305543.1| - 0.0011 18.4 0.1 0.0032 16.9 0.1 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|73669528|ref|YP_305543.1| - 0.0044 17.5 1.1 0.0044 17.5 1.1 1.6 2 1 0 2 2 1 1 AAA domain AAA_16 PF13191.6 gi|73669528|ref|YP_305543.1| - 0.0079 16.6 0.1 0.021 15.2 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 gi|73669528|ref|YP_305543.1| - 0.011 15.5 0.2 0.031 14.0 0.1 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_29 PF13555.6 gi|73669528|ref|YP_305543.1| - 0.019 14.7 0.0 0.041 13.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 gi|73669528|ref|YP_305543.1| - 0.038 14.0 0.1 0.085 12.9 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|73669528|ref|YP_305543.1| - 0.039 14.4 0.0 0.074 13.5 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|73669528|ref|YP_305543.1| - 0.046 14.3 0.1 0.1 13.2 0.1 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|73669528|ref|YP_305543.1| - 0.05 13.6 0.2 0.11 12.5 0.2 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 gi|73669528|ref|YP_305543.1| - 0.053 13.4 0.3 0.25 11.2 0.1 2.0 2 0 0 2 2 2 0 RsgA GTPase PduV-EutP PF10662.9 gi|73669528|ref|YP_305543.1| - 0.067 12.9 0.3 0.2 11.4 0.1 1.9 2 0 0 2 2 1 0 Ethanolamine utilisation - propanediol utilisation Mg_chelatase PF01078.21 gi|73669528|ref|YP_305543.1| - 0.088 12.2 0.0 0.88 8.9 0.0 2.1 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI YidD PF01809.18 gi|73669528|ref|YP_305543.1| - 0.1 12.5 0.3 0.19 11.6 0.3 1.4 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor IstB_IS21 PF01695.17 gi|73669528|ref|YP_305543.1| - 0.15 11.8 0.4 4.2 7.1 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein NACHT PF05729.12 gi|73669528|ref|YP_305543.1| - 0.18 11.7 0.3 0.79 9.6 0.1 2.0 2 0 0 2 2 2 0 NACHT domain ATP-synt_ab PF00006.25 gi|73669528|ref|YP_305543.1| - 0.2 11.3 0.1 0.33 10.6 0.1 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain zf-CCCH_2 PF14608.6 gi|73669528|ref|YP_305543.1| - 2.3 8.8 5.5 0.43 11.1 1.8 1.8 2 0 0 2 2 1 0 RNA-binding, Nab2-type zinc finger BPD_transp_1 PF00528.22 gi|73669529|ref|YP_305544.1| - 3.6e-28 98.5 6.2 3.6e-28 98.5 6.2 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|73669529|ref|YP_305544.1| - 1.1e-11 44.5 1.4 1.1e-11 44.5 1.4 2.9 5 0 0 5 5 5 1 N-terminal TM domain of oligopeptide transport permease C DUF2106 PF09879.9 gi|73669529|ref|YP_305544.1| - 0.19 11.3 2.0 0.25 10.9 0.9 1.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2106) BPD_transp_1 PF00528.22 gi|73669530|ref|YP_305545.1| - 4.4e-43 147.2 12.5 4.4e-43 147.2 12.5 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|73669530|ref|YP_305545.1| - 0.031 14.2 0.0 0.031 14.2 0.0 3.0 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C DUF3693 PF12472.8 gi|73669530|ref|YP_305545.1| - 0.48 10.1 0.0 0.48 10.1 0.0 3.0 4 0 0 4 4 4 0 Phage related protein SBP_bac_5 PF00496.22 gi|73669531|ref|YP_305546.1| - 2e-88 296.9 0.1 2.6e-88 296.5 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Methyltransf_25 PF13649.6 gi|73669532|ref|YP_305547.1| - 8e-12 45.7 0.0 1.4e-11 44.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73669532|ref|YP_305547.1| - 2.4e-09 37.2 0.0 3.9e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669532|ref|YP_305547.1| - 1.9e-07 31.0 0.0 3.8e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73669532|ref|YP_305547.1| - 1.9e-07 31.7 0.0 3.4e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669532|ref|YP_305547.1| - 7.6e-07 29.7 0.0 1.4e-06 28.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|73669532|ref|YP_305547.1| - 1e-06 28.1 0.0 1.8e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase GidB PF02527.15 gi|73669532|ref|YP_305547.1| - 1.6e-06 27.6 0.0 2.7e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PCMT PF01135.19 gi|73669532|ref|YP_305547.1| - 2e-06 27.7 0.0 3.1e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_15 PF09445.10 gi|73669532|ref|YP_305547.1| - 2.2e-06 27.3 0.0 3.8e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase DREV PF05219.12 gi|73669532|ref|YP_305547.1| - 0.00014 21.1 0.0 0.00021 20.5 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase MTS PF05175.14 gi|73669532|ref|YP_305547.1| - 0.00028 20.5 0.0 0.00039 20.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 gi|73669532|ref|YP_305547.1| - 0.00033 20.2 0.0 0.00064 19.2 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Cons_hypoth95 PF03602.15 gi|73669532|ref|YP_305547.1| - 0.00048 19.8 0.0 0.00076 19.2 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|73669532|ref|YP_305547.1| - 0.0011 18.4 0.1 0.0025 17.2 0.0 1.5 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|73669532|ref|YP_305547.1| - 0.0023 17.9 0.0 0.0069 16.3 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|73669532|ref|YP_305547.1| - 0.0026 17.5 0.0 0.004 16.9 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Met_10 PF02475.16 gi|73669532|ref|YP_305547.1| - 0.0027 17.5 0.0 0.0043 16.8 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Ubie_methyltran PF01209.18 gi|73669532|ref|YP_305547.1| - 0.0033 16.8 0.0 0.0058 16.0 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family tRNA_U5-meth_tr PF05958.11 gi|73669532|ref|YP_305547.1| - 0.0061 15.6 0.0 0.0096 14.9 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltr_RsmB-F PF01189.17 gi|73669532|ref|YP_305547.1| - 0.0063 16.2 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Fibrillarin PF01269.17 gi|73669532|ref|YP_305547.1| - 0.019 14.1 0.0 0.033 13.3 0.0 1.4 1 0 0 1 1 1 0 Fibrillarin CMAS PF02353.20 gi|73669532|ref|YP_305547.1| - 0.021 14.1 0.0 0.04 13.2 0.0 1.4 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase TehB PF03848.14 gi|73669532|ref|YP_305547.1| - 0.028 13.8 0.0 0.047 13.1 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB DUF938 PF06080.12 gi|73669532|ref|YP_305547.1| - 0.077 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_2 PF00891.18 gi|73669532|ref|YP_305547.1| - 0.1 11.9 0.0 0.19 11.0 0.0 1.4 1 0 0 1 1 1 0 O-methyltransferase domain Tgi2PP PF18250.1 gi|73669533|ref|YP_305548.1| - 0.064 13.5 0.2 0.099 12.9 0.1 1.4 1 1 0 1 1 1 0 Effector immunity protein Tgi2PP Metallophos_2 PF12850.7 gi|73669534|ref|YP_305549.1| - 1.1e-28 100.5 0.0 1.4e-28 100.2 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|73669534|ref|YP_305549.1| - 4.5e-05 24.1 0.1 0.022 15.2 0.0 2.3 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase MarR_2 PF12802.7 gi|73669535|ref|YP_305550.1| - 2e-10 40.4 0.0 4.2e-10 39.4 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|73669535|ref|YP_305550.1| - 2e-10 40.1 0.0 4.9e-10 38.8 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|73669535|ref|YP_305550.1| - 5.3e-07 29.5 0.4 4.1e-06 26.7 0.0 2.4 3 0 0 3 3 2 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|73669535|ref|YP_305550.1| - 1.1e-06 28.5 0.0 2.8e-06 27.1 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.6 gi|73669535|ref|YP_305550.1| - 4.5e-05 23.3 0.6 0.00021 21.2 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_11 PF08279.12 gi|73669535|ref|YP_305550.1| - 0.00011 22.1 0.1 0.00023 21.0 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_3 PF01381.22 gi|73669535|ref|YP_305550.1| - 0.00011 22.2 0.2 0.0036 17.3 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix Rrf2 PF02082.20 gi|73669535|ref|YP_305550.1| - 0.00027 21.2 0.0 0.00059 20.1 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator Mnd1 PF03962.15 gi|73669535|ref|YP_305550.1| - 0.00033 20.9 0.0 0.0011 19.3 0.0 1.8 1 0 0 1 1 1 1 Mnd1 HTH domain HTH_27 PF13463.6 gi|73669535|ref|YP_305550.1| - 0.00055 20.4 0.0 0.0014 19.1 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|73669535|ref|YP_305550.1| - 0.0017 18.5 0.0 0.0044 17.2 0.0 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.10 gi|73669535|ref|YP_305550.1| - 0.0029 17.4 0.0 0.0055 16.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_28 PF13518.6 gi|73669535|ref|YP_305550.1| - 0.003 17.6 0.0 0.02 15.0 0.0 2.4 3 0 0 3 3 2 1 Helix-turn-helix domain HTH_36 PF13730.6 gi|73669535|ref|YP_305550.1| - 0.0081 16.1 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|73669535|ref|YP_305550.1| - 0.0083 15.9 0.1 0.024 14.4 0.0 1.8 2 0 0 2 2 1 1 Homeodomain-like domain DUF4423 PF14394.6 gi|73669535|ref|YP_305550.1| - 0.009 15.7 0.1 0.014 15.1 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HxlR PF01638.17 gi|73669535|ref|YP_305550.1| - 0.014 15.2 0.1 0.036 13.9 0.1 1.7 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF4364 PF14277.6 gi|73669535|ref|YP_305550.1| - 0.021 14.6 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) GntR PF00392.21 gi|73669535|ref|YP_305550.1| - 0.03 14.0 0.0 0.084 12.5 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family YdaS_antitoxin PF15943.5 gi|73669535|ref|YP_305550.1| - 0.035 14.0 0.3 0.49 10.3 0.0 2.5 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_13 PF11972.8 gi|73669535|ref|YP_305550.1| - 0.035 14.2 0.1 0.11 12.6 0.0 1.8 2 0 0 2 2 1 0 HTH DNA binding domain HTH_5 PF01022.20 gi|73669535|ref|YP_305550.1| - 0.036 14.0 0.0 0.089 12.7 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_10 PF04967.12 gi|73669535|ref|YP_305550.1| - 0.037 13.8 0.0 0.095 12.5 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain Phage_rep_O PF04492.13 gi|73669535|ref|YP_305550.1| - 0.044 14.4 0.1 0.12 13.0 0.0 1.8 2 0 0 2 2 1 0 Bacteriophage replication protein O TrmB PF01978.19 gi|73669535|ref|YP_305550.1| - 0.068 13.1 0.1 0.2 11.6 0.1 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Mrr_N PF14338.6 gi|73669535|ref|YP_305550.1| - 0.1 12.8 0.0 0.53 10.5 0.0 2.1 1 1 0 1 1 1 0 Mrr N-terminal domain AbiEi_4 PF13338.6 gi|73669535|ref|YP_305550.1| - 0.12 12.6 0.0 0.33 11.1 0.0 1.8 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin ArsR PF09824.9 gi|73669536|ref|YP_305551.1| - 1.4e-66 223.0 0.0 1.6e-66 222.8 0.0 1.0 1 0 0 1 1 1 1 ArsR transcriptional regulator SMC_ScpB PF04079.16 gi|73669536|ref|YP_305551.1| - 0.01 15.4 0.0 0.34 10.5 0.0 2.1 2 0 0 2 2 2 0 Segregation and condensation complex subunit ScpB DS PF01916.17 gi|73669537|ref|YP_305552.1| - 5.6e-102 340.9 0.2 6.4e-102 340.7 0.2 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase CdAMP_rec PF06153.11 gi|73669537|ref|YP_305552.1| - 0.044 14.0 0.0 0.21 11.8 0.0 2.0 2 0 0 2 2 2 0 Cyclic-di-AMP receptor PvlArgDC PF01862.16 gi|73669538|ref|YP_305553.1| - 3.7e-56 189.4 0.0 4.1e-56 189.2 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) HTH_5 PF01022.20 gi|73669539|ref|YP_305554.1| - 0.047 13.6 0.8 2.2 8.2 0.3 3.3 3 0 0 3 3 3 0 Bacterial regulatory protein, arsR family DUF2193 PF09959.9 gi|73669540|ref|YP_305555.1| - 2.8e-255 847.5 1.9 3.1e-255 847.3 1.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2193) DUF3231 PF11553.8 gi|73669540|ref|YP_305555.1| - 0.011 15.3 0.1 5.3 6.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3231) MIP PF00230.20 gi|73669541|ref|YP_305556.1| - 7.7e-48 163.2 17.3 8.8e-48 163.0 17.3 1.0 1 0 0 1 1 1 1 Major intrinsic protein DUF2070 PF09843.9 gi|73669541|ref|YP_305556.1| - 4.5 5.5 12.1 3.4 5.8 2.4 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) OrfB_IS605 PF01385.19 gi|73669542|ref|YP_305557.1| - 1.6e-27 96.1 1.1 3.2e-27 95.1 1.1 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73669542|ref|YP_305557.1| - 4.7e-22 77.7 0.3 8.5e-22 76.9 0.3 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73669542|ref|YP_305557.1| - 1.8e-20 72.1 0.3 3.4e-20 71.2 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73669542|ref|YP_305557.1| - 0.00061 19.9 1.6 0.0011 19.0 0.7 1.8 2 0 0 2 2 2 1 Piccolo Zn-finger HypA PF01155.19 gi|73669542|ref|YP_305557.1| - 0.12 12.4 0.4 0.22 11.5 0.4 1.6 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|73669542|ref|YP_305557.1| - 0.13 12.3 0.5 0.27 11.3 0.5 1.5 1 0 0 1 1 1 0 Double zinc ribbon zf-RanBP PF00641.18 gi|73669542|ref|YP_305557.1| - 7 6.1 8.4 17 4.9 0.4 2.6 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others CN_hydrolase PF00795.22 gi|73669543|ref|YP_305558.1| - 1.7e-50 171.8 0.0 2.2e-50 171.5 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase CPBP PF02517.16 gi|73669544|ref|YP_305559.1| - 2.1e-10 40.9 23.1 4.1e-09 36.7 23.1 2.6 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease Ploopntkinase1 PF18748.1 gi|73669544|ref|YP_305559.1| - 0.11 11.9 0.2 0.22 11.0 0.2 1.5 1 0 0 1 1 1 0 P-loop Nucleotide Kinase1 MFS_1 PF07690.16 gi|73669545|ref|YP_305560.1| - 1.1e-31 110.1 61.2 3.2e-29 101.9 30.4 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|73669545|ref|YP_305560.1| - 1.8e-12 46.4 13.3 2.6e-12 45.9 13.3 1.2 1 0 0 1 1 1 1 Transmembrane secretion effector DUF3953 PF13129.6 gi|73669545|ref|YP_305560.1| - 0.012 15.4 0.3 0.012 15.4 0.3 5.3 6 0 0 6 6 6 0 Protein of unknown function (DUF3953) tRNA-synt_1 PF00133.22 gi|73669547|ref|YP_305562.1| - 3.4e-60 203.9 0.3 9.9e-59 199.1 0.3 2.7 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|73669547|ref|YP_305562.1| - 3.5e-25 88.6 0.4 1.8e-11 43.5 0.0 3.3 3 0 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|73669547|ref|YP_305562.1| - 4.7e-21 75.3 0.1 9.6e-21 74.3 0.1 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|73669547|ref|YP_305562.1| - 8.8e-11 41.7 0.1 5e-07 29.4 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|73669547|ref|YP_305562.1| - 3.1e-05 23.6 0.0 6e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1d PF00750.19 gi|73669547|ref|YP_305562.1| - 0.0023 16.9 0.0 0.0091 15.0 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (R) tRNA-synt_1f PF01921.18 gi|73669547|ref|YP_305562.1| - 0.018 14.0 0.0 0.047 12.6 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (K) PALP PF00291.25 gi|73669548|ref|YP_305563.1| - 2.1e-79 267.0 2.7 2.4e-79 266.8 2.7 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme zinc-ribbons_6 PF07191.12 gi|73669548|ref|YP_305563.1| - 0.14 12.2 0.5 0.29 11.1 0.5 1.5 1 0 0 1 1 1 0 zinc-ribbons C1_2 PF03107.16 gi|73669548|ref|YP_305563.1| - 0.15 12.4 2.0 0.35 11.2 2.0 1.6 1 0 0 1 1 1 0 C1 domain zinc_ribbon_2 PF13240.6 gi|73669548|ref|YP_305563.1| - 0.23 11.2 2.6 0.51 10.1 2.6 1.6 1 0 0 1 1 1 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|73669548|ref|YP_305563.1| - 0.29 10.9 1.7 21 5.0 0.1 2.6 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF1622 PF07784.11 gi|73669549|ref|YP_305564.1| - 1.9e-21 75.7 1.2 2.5e-21 75.4 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) DUF1622 PF07784.11 gi|73669550|ref|YP_305565.1| - 5.2e-22 77.5 1.3 6.9e-22 77.2 1.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) DUF1529 PF07485.11 gi|73669551|ref|YP_305566.1| - 2.8e-72 240.3 0.0 1.9e-40 137.5 0.0 2.1 2 0 0 2 2 2 2 Domain of Unknown Function (DUF1259) TxDE PF18711.1 gi|73669551|ref|YP_305566.1| - 0.075 13.2 2.1 3.3 7.9 0.2 3.0 3 0 0 3 3 3 0 Toxoflavin-degrading enzyme DUF3458_C PF17432.2 gi|73669552|ref|YP_305567.1| - 7.5e-35 120.8 3.1 1.2e-34 120.2 3.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3458_C) ARM repeats Peptidase_M1 PF01433.20 gi|73669552|ref|YP_305567.1| - 1e-27 97.1 0.0 2.3e-27 96.0 0.0 1.5 1 0 0 1 1 1 1 Peptidase family M1 domain DUF3458 PF11940.8 gi|73669552|ref|YP_305567.1| - 2.8e-11 43.7 0.0 7.6e-11 42.3 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Ig-like fold Peptidase_M1_N PF17900.1 gi|73669552|ref|YP_305567.1| - 3.3e-09 37.2 0.0 6.2e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain SCF PF02404.15 gi|73669552|ref|YP_305567.1| - 0.048 13.0 0.3 4.5 6.5 0.1 3.3 4 0 0 4 4 4 0 Stem cell factor Pet100 PF09803.9 gi|73669552|ref|YP_305567.1| - 0.11 13.0 0.3 0.45 11.1 0.3 2.0 1 0 0 1 1 1 0 Pet100 Big_3_5 PF16640.5 gi|73669553|ref|YP_305568.1| - 7e-23 80.6 1.4 1.6e-22 79.5 1.4 1.6 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 3) TcfC PF16967.5 gi|73669553|ref|YP_305568.1| - 0.0061 16.0 0.0 0.012 15.1 0.0 1.4 1 0 0 1 1 1 1 E-set like domain Inhibitor_I42 PF09394.10 gi|73669554|ref|YP_305569.1| - 2.2e-23 82.5 0.2 3.5e-23 81.8 0.2 1.3 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 PBECR1 PF18809.1 gi|73669554|ref|YP_305569.1| - 0.01 16.5 0.1 0.017 15.8 0.1 1.4 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1 TrbI PF03743.14 gi|73669554|ref|YP_305569.1| - 0.03 14.1 0.6 0.044 13.6 0.6 1.2 1 0 0 1 1 1 0 Bacterial conjugation TrbI-like protein CAAD PF14159.6 gi|73669555|ref|YP_305570.1| - 0.13 12.1 0.7 0.23 11.3 0.7 1.5 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DUF1724 PF08350.10 gi|73669557|ref|YP_305572.1| - 1.1e-15 57.5 0.0 2.1e-15 56.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|73669557|ref|YP_305572.1| - 0.015 15.2 0.1 0.029 14.2 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|73669557|ref|YP_305572.1| - 0.084 12.8 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Fae PF08714.11 gi|73669559|ref|YP_305574.1| - 8.7e-72 240.3 0.7 9.9e-72 240.1 0.7 1.0 1 0 0 1 1 1 1 Formaldehyde-activating enzyme (Fae) FolB PF02152.18 gi|73669559|ref|YP_305574.1| - 0.077 13.6 0.1 0.23 12.0 0.0 1.8 2 0 0 2 2 2 0 Dihydroneopterin aldolase Dynein_heavy PF03028.15 gi|73669560|ref|YP_305575.1| - 0.12 12.5 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Dynein heavy chain region D6 P-loop domain YycI PF09648.10 gi|73669561|ref|YP_305576.1| - 1.9e-06 27.7 1.2 2.7e-06 27.1 1.2 1.2 1 0 0 1 1 1 1 YycH protein DUF4901 PF16244.5 gi|73669561|ref|YP_305576.1| - 0.00087 18.7 0.2 0.0081 15.5 0.2 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4901) Sigma_reg_N PF13800.6 gi|73669562|ref|YP_305577.1| - 0.022 15.0 1.6 0.022 15.0 1.6 1.8 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF1699 PF08004.11 gi|73669563|ref|YP_305578.1| - 5.7e-63 210.4 1.0 6.5e-63 210.2 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) PAM2 PF07145.15 gi|73669563|ref|YP_305578.1| - 0.058 13.1 0.1 8 6.4 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region WHEP-TRS PF00458.20 gi|73669563|ref|YP_305578.1| - 0.12 12.5 0.1 0.2 11.8 0.1 1.2 1 0 0 1 1 1 0 WHEP-TRS domain DUF4394 PF14339.6 gi|73669563|ref|YP_305578.1| - 0.23 10.8 0.0 0.27 10.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) DUF1724 PF08350.10 gi|73669564|ref|YP_305579.1| - 2.7e-14 53.0 1.4 4.8e-14 52.2 0.0 2.2 3 0 0 3 3 3 1 Domain of unknown function (DUF1724) HTH_11 PF08279.12 gi|73669564|ref|YP_305579.1| - 0.00064 19.6 0.1 0.0013 18.6 0.1 1.5 1 0 0 1 1 1 1 HTH domain HxlR PF01638.17 gi|73669564|ref|YP_305579.1| - 0.014 15.2 0.2 0.081 12.8 0.1 2.4 2 1 0 2 2 2 0 HxlR-like helix-turn-helix HTH_27 PF13463.6 gi|73669564|ref|YP_305579.1| - 0.016 15.7 0.0 0.03 14.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|73669564|ref|YP_305579.1| - 0.042 13.7 1.1 0.068 13.1 0.1 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|73669564|ref|YP_305579.1| - 0.073 13.0 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB ILVD_EDD PF00920.21 gi|73669565|ref|YP_305580.1| - 1.2e-222 740.1 0.5 1.4e-222 739.9 0.5 1.0 1 0 0 1 1 1 1 Dehydratase family PAS_3 PF08447.12 gi|73669566|ref|YP_305581.1| - 3.9e-57 190.5 5.6 3.2e-18 65.8 0.1 3.4 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.7 gi|73669566|ref|YP_305581.1| - 6.6e-11 42.4 3.9 0.0022 18.2 0.1 3.4 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 gi|73669566|ref|YP_305581.1| - 1.8e-09 37.6 1.3 0.0036 17.3 0.1 3.5 3 0 0 3 3 3 3 PAS fold GAF_2 PF13185.6 gi|73669566|ref|YP_305581.1| - 1.2e-07 32.1 0.0 2.2e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 GAF domain PAS_11 PF14598.6 gi|73669566|ref|YP_305581.1| - 4.7e-07 29.9 0.0 0.62 10.2 0.0 3.6 3 1 0 3 3 3 3 PAS domain PAS_4 PF08448.10 gi|73669566|ref|YP_305581.1| - 7.5e-07 29.4 0.0 8.9 6.6 0.0 4.3 4 0 0 4 4 4 3 PAS fold GAF_3 PF13492.6 gi|73669566|ref|YP_305581.1| - 2.6e-05 24.6 0.0 4.7e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|73669566|ref|YP_305581.1| - 0.0003 21.4 0.0 0.00055 20.6 0.0 1.5 1 0 0 1 1 1 1 GAF domain LicD PF04991.13 gi|73669566|ref|YP_305581.1| - 0.002 18.3 1.6 0.8 9.8 0.0 3.1 3 0 0 3 3 3 1 LicD family VanY PF02557.17 gi|73669566|ref|YP_305581.1| - 0.0022 17.8 0.0 3.8 7.3 0.0 3.6 3 0 0 3 3 3 1 D-alanyl-D-alanine carboxypeptidase DUF5370 PF17340.2 gi|73669566|ref|YP_305581.1| - 0.0079 16.1 0.1 2.1 8.3 0.0 3.5 4 0 0 4 4 4 1 Family of unknown function (DUF5370) R2K_2 PF18299.1 gi|73669566|ref|YP_305581.1| - 0.097 12.5 0.7 8.8 6.2 0.0 3.4 3 1 0 3 3 3 0 ATP-grasp domain, R2K clade family 2 Flavodoxin_1 PF00258.25 gi|73669567|ref|YP_305582.1| - 9.9e-14 51.8 0.0 1.3e-13 51.4 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.7 gi|73669567|ref|YP_305582.1| - 8.8e-10 39.0 0.0 1.1e-09 38.6 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_3 PF12641.7 gi|73669567|ref|YP_305582.1| - 3.2e-06 26.9 0.0 4.3e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain FMN_red PF03358.15 gi|73669567|ref|YP_305582.1| - 0.068 12.9 0.2 6.4 6.5 0.0 2.1 1 1 1 2 2 2 0 NADPH-dependent FMN reductase MtrH PF02007.18 gi|73669568|ref|YP_305583.1| - 8.9e-122 405.9 0.3 1e-121 405.7 0.3 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit MtrA PF04208.14 gi|73669569|ref|YP_305584.1| - 1.4e-55 187.6 0.4 1.6e-55 187.4 0.4 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A PTA_PTB PF01515.19 gi|73669570|ref|YP_305585.1| - 4.3e-05 23.0 0.0 0.02 14.2 0.0 2.1 1 1 1 2 2 2 2 Phosphate acetyl/butaryl transferase AAA PF00004.29 gi|73669571|ref|YP_305586.1| - 3.2e-11 43.8 0.0 9.1e-11 42.3 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|73669571|ref|YP_305586.1| - 1.2e-06 28.6 0.0 2.6e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 gi|73669571|ref|YP_305586.1| - 4.2e-06 27.1 0.1 0.016 15.5 0.0 3.7 2 2 1 3 3 3 1 AAA domain AAA_16 PF13191.6 gi|73669571|ref|YP_305586.1| - 3.6e-05 24.2 0.1 0.00013 22.4 0.0 1.9 2 1 0 2 2 1 1 AAA ATPase domain RuvB_N PF05496.12 gi|73669571|ref|YP_305586.1| - 4.2e-05 23.3 0.0 8.8e-05 22.3 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 gi|73669571|ref|YP_305586.1| - 0.00021 21.3 0.0 0.0006 19.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 gi|73669571|ref|YP_305586.1| - 0.00022 21.5 0.1 0.00071 19.9 0.1 1.9 1 0 0 1 1 1 1 AAA C-terminal domain AAA_6 PF12774.7 gi|73669571|ref|YP_305586.1| - 0.0015 17.6 0.0 0.0092 15.0 0.0 2.0 2 0 0 2 2 2 1 Hydrolytic ATP binding site of dynein motor region AAA_30 PF13604.6 gi|73669571|ref|YP_305586.1| - 0.0035 17.1 0.2 0.0081 15.9 0.2 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|73669571|ref|YP_305586.1| - 0.0047 17.1 0.0 0.011 15.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|73669571|ref|YP_305586.1| - 0.006 16.3 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein NACHT PF05729.12 gi|73669571|ref|YP_305586.1| - 0.0082 16.1 0.0 0.12 12.3 0.0 2.7 3 0 0 3 3 3 1 NACHT domain AAA_7 PF12775.7 gi|73669571|ref|YP_305586.1| - 0.013 15.0 0.0 0.026 14.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 gi|73669571|ref|YP_305586.1| - 0.014 15.4 0.0 0.078 13.0 0.0 2.3 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 gi|73669571|ref|YP_305586.1| - 0.016 15.6 0.0 0.067 13.6 0.0 2.2 2 0 0 2 2 1 0 RNA helicase IPT PF01745.16 gi|73669571|ref|YP_305586.1| - 0.016 14.6 0.0 0.057 12.8 0.0 1.9 2 0 0 2 2 2 0 Isopentenyl transferase DNA_pol3_delta2 PF13177.6 gi|73669571|ref|YP_305586.1| - 0.022 14.5 0.0 1.7 8.4 0.0 2.7 1 1 1 2 2 2 0 DNA polymerase III, delta subunit PPV_E1_C PF00519.17 gi|73669571|ref|YP_305586.1| - 0.026 13.4 0.0 0.04 12.8 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase AAA_2 PF07724.14 gi|73669571|ref|YP_305586.1| - 0.026 14.6 0.0 0.064 13.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) RsgA_GTPase PF03193.16 gi|73669571|ref|YP_305586.1| - 0.054 13.4 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase DUF815 PF05673.13 gi|73669571|ref|YP_305586.1| - 0.058 12.6 0.0 0.095 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_28 PF13521.6 gi|73669571|ref|YP_305586.1| - 0.073 13.3 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|73669571|ref|YP_305586.1| - 0.077 13.5 0.0 0.22 12.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|73669571|ref|YP_305586.1| - 0.079 13.0 0.0 0.37 10.8 0.0 2.1 1 1 1 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Cytidylate_kin PF02224.18 gi|73669571|ref|YP_305586.1| - 0.085 12.6 0.0 0.22 11.2 0.0 1.7 2 0 0 2 2 1 0 Cytidylate kinase ABC_tran PF00005.27 gi|73669571|ref|YP_305586.1| - 0.11 13.0 0.6 0.98 9.9 0.0 2.8 3 2 1 4 4 3 0 ABC transporter HTH_45 PF14947.6 gi|73669572|ref|YP_305587.1| - 1.8e-22 79.1 1.3 2.4e-22 78.7 1.3 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix FMN_red PF03358.15 gi|73669573|ref|YP_305588.1| - 6.2e-18 65.0 0.0 7.7e-18 64.7 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73669573|ref|YP_305588.1| - 8.9e-06 25.5 0.0 2.1e-05 24.3 0.0 1.6 1 1 0 1 1 1 1 Flavodoxin-like fold AAA PF00004.29 gi|73669574|ref|YP_305589.1| - 5.2e-96 318.1 0.0 8.3e-48 162.2 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|73669574|ref|YP_305589.1| - 1.7e-30 104.5 0.3 1.3e-14 53.7 0.2 2.8 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|73669574|ref|YP_305589.1| - 2.1e-25 88.7 0.0 9.3e-25 86.6 0.0 2.1 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_16 PF13191.6 gi|73669574|ref|YP_305589.1| - 6.2e-17 62.5 0.2 2.4e-08 34.5 0.0 3.1 3 1 0 3 3 2 2 AAA ATPase domain RuvB_N PF05496.12 gi|73669574|ref|YP_305589.1| - 3.8e-14 52.8 0.0 6.5e-06 26.0 0.0 2.7 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|73669574|ref|YP_305589.1| - 4.2e-14 53.0 0.0 2e-07 31.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) CDC48_2 PF02933.17 gi|73669574|ref|YP_305589.1| - 6e-14 51.6 0.8 2.8e-13 49.4 0.3 2.3 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 AAA_5 PF07728.14 gi|73669574|ref|YP_305589.1| - 4.5e-12 46.2 1.0 3.3e-05 23.9 0.0 3.8 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|73669574|ref|YP_305589.1| - 4e-11 43.3 0.5 0.0011 19.2 0.0 4.4 2 2 1 3 3 3 2 AAA domain AAA_14 PF13173.6 gi|73669574|ref|YP_305589.1| - 6.3e-11 42.4 0.0 8.2e-06 25.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|73669574|ref|YP_305589.1| - 5.6e-10 39.0 0.0 0.00065 19.0 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|73669574|ref|YP_305589.1| - 2.2e-09 37.6 0.0 0.00016 21.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|73669574|ref|YP_305589.1| - 9.9e-09 35.2 0.0 0.0034 17.1 0.0 2.9 3 0 0 3 3 3 2 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|73669574|ref|YP_305589.1| - 4.5e-08 33.0 0.0 0.0084 15.8 0.0 3.3 3 1 0 3 3 3 2 Sigma-54 interaction domain NACHT PF05729.12 gi|73669574|ref|YP_305589.1| - 2.1e-07 31.0 0.4 0.49 10.3 0.0 4.0 3 1 1 4 4 4 2 NACHT domain ABC_tran PF00005.27 gi|73669574|ref|YP_305589.1| - 5e-07 30.3 0.0 0.011 16.3 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_18 PF13238.6 gi|73669574|ref|YP_305589.1| - 5.9e-07 30.1 0.0 0.063 13.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|73669574|ref|YP_305589.1| - 6.1e-07 29.0 0.3 0.028 13.8 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|73669574|ref|YP_305589.1| - 6.5e-07 29.7 0.0 0.056 13.8 0.0 2.7 2 0 0 2 2 2 2 RNA helicase AAA_24 PF13479.6 gi|73669574|ref|YP_305589.1| - 1.8e-06 27.8 0.0 0.019 14.7 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 gi|73669574|ref|YP_305589.1| - 2.9e-06 26.9 0.0 0.088 12.3 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region Parvo_NS1 PF01057.17 gi|73669574|ref|YP_305589.1| - 5.8e-06 25.6 0.0 0.022 13.9 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_28 PF13521.6 gi|73669574|ref|YP_305589.1| - 6.7e-06 26.4 0.0 0.11 12.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|73669574|ref|YP_305589.1| - 8.4e-06 25.4 0.2 0.46 9.9 0.0 3.8 4 0 0 4 4 4 2 PhoH-like protein ATPase PF06745.13 gi|73669574|ref|YP_305589.1| - 1.2e-05 24.8 0.1 0.47 9.7 0.0 3.4 2 1 0 3 3 3 2 KaiC Zeta_toxin PF06414.12 gi|73669574|ref|YP_305589.1| - 2.3e-05 23.8 0.0 0.24 10.7 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin TsaE PF02367.17 gi|73669574|ref|YP_305589.1| - 2.5e-05 24.3 0.0 0.39 10.7 0.0 2.6 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE NB-ARC PF00931.22 gi|73669574|ref|YP_305589.1| - 5.4e-05 22.5 0.0 0.24 10.6 0.0 2.5 2 0 0 2 2 2 2 NB-ARC domain DUF2075 PF09848.9 gi|73669574|ref|YP_305589.1| - 6.3e-05 22.4 0.0 0.17 11.1 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Vps4_C PF09336.10 gi|73669574|ref|YP_305589.1| - 9.9e-05 22.3 0.1 0.13 12.3 0.0 3.1 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_3 PF07726.11 gi|73669574|ref|YP_305589.1| - 0.0001 22.2 0.0 0.66 9.8 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|73669574|ref|YP_305589.1| - 0.00011 22.1 0.0 0.3 10.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain Sigma54_activ_2 PF14532.6 gi|73669574|ref|YP_305589.1| - 0.00019 21.6 0.0 0.55 10.4 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 gi|73669574|ref|YP_305589.1| - 0.00058 19.6 0.1 1.1 9.0 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|73669574|ref|YP_305589.1| - 0.00059 19.5 6.0 0.42 10.1 0.2 3.7 2 2 1 3 3 3 1 AAA domain ATPase_2 PF01637.18 gi|73669574|ref|YP_305589.1| - 0.00077 19.4 0.0 2.6 7.9 0.0 3.3 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_19 PF13245.6 gi|73669574|ref|YP_305589.1| - 0.0013 19.1 0.0 1.7 8.9 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|73669574|ref|YP_305589.1| - 0.0013 19.1 0.0 1.2 9.6 0.0 3.1 3 0 0 3 3 3 1 AAA domain DUF815 PF05673.13 gi|73669574|ref|YP_305589.1| - 0.0018 17.5 0.0 1.5 7.9 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Guanylate_kin PF00625.21 gi|73669574|ref|YP_305589.1| - 0.0034 17.1 0.1 15 5.2 0.0 4.2 2 2 2 4 4 4 0 Guanylate kinase ResIII PF04851.15 gi|73669574|ref|YP_305589.1| - 0.0051 16.8 0.0 1.9 8.5 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Bac_DnaA PF00308.18 gi|73669574|ref|YP_305589.1| - 0.0054 16.6 0.1 2.9 7.7 0.0 2.8 2 1 0 2 2 2 1 Bacterial dnaA protein NTPase_1 PF03266.15 gi|73669574|ref|YP_305589.1| - 0.027 14.4 0.5 14 5.5 0.0 3.5 3 1 1 4 4 3 0 NTPase TniB PF05621.11 gi|73669574|ref|YP_305589.1| - 0.037 13.4 0.0 16 4.9 0.0 3.3 4 0 0 4 4 4 0 Bacterial TniB protein CPT PF07931.12 gi|73669574|ref|YP_305589.1| - 0.038 13.8 0.0 7.7 6.3 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein SKI PF01202.22 gi|73669574|ref|YP_305589.1| - 0.038 14.1 0.1 21 5.2 0.0 3.2 3 0 0 3 3 3 0 Shikimate kinase Cytidylate_kin PF02224.18 gi|73669574|ref|YP_305589.1| - 0.06 13.1 0.1 13 5.4 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase KAP_NTPase PF07693.14 gi|73669574|ref|YP_305589.1| - 0.064 12.5 0.2 11 5.2 0.0 3.1 2 2 1 3 3 3 0 KAP family P-loop domain AFG1_ATPase PF03969.16 gi|73669574|ref|YP_305589.1| - 0.074 11.9 0.0 12 4.7 0.0 2.3 2 0 0 2 2 2 0 AFG1-like ATPase Viral_helicase1 PF01443.18 gi|73669574|ref|YP_305589.1| - 0.085 12.6 0.0 7 6.3 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Hydin_ADK PF17213.3 gi|73669574|ref|YP_305589.1| - 0.13 12.6 0.3 5.1 7.3 0.0 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Torsin PF06309.11 gi|73669574|ref|YP_305589.1| - 0.13 12.3 0.0 9.5 6.3 0.0 2.4 2 0 0 2 2 2 0 Torsin PduV-EutP PF10662.9 gi|73669574|ref|YP_305589.1| - 0.14 11.9 0.0 21 4.9 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation CBS PF00571.28 gi|73669575|ref|YP_305590.1| - 1.2e-18 67.3 3.8 4.5e-10 39.8 0.2 2.7 2 1 1 3 3 3 2 CBS domain HTH_3 PF01381.22 gi|73669575|ref|YP_305590.1| - 3.2e-15 55.9 0.2 1.4e-14 53.9 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 gi|73669575|ref|YP_305590.1| - 6.4e-12 45.6 0.0 1.4e-11 44.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|73669575|ref|YP_305590.1| - 2.5e-07 30.6 0.1 5.5e-07 29.5 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|73669575|ref|YP_305590.1| - 0.00012 21.8 0.0 0.00022 21.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|73669575|ref|YP_305590.1| - 0.0002 21.3 0.1 0.0019 18.1 0.0 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|73669575|ref|YP_305590.1| - 0.00024 21.5 0.0 0.0012 19.3 0.0 2.1 2 1 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain Pou PF00157.17 gi|73669575|ref|YP_305590.1| - 0.0059 16.6 0.0 0.02 14.8 0.0 1.9 1 1 0 1 1 1 1 Pou domain - N-terminal to homeobox domain LacI PF00356.21 gi|73669575|ref|YP_305590.1| - 0.017 14.9 1.2 4.1 7.3 0.1 2.9 2 1 0 2 2 2 0 Bacterial regulatory proteins, lacI family MqsA_antitoxin PF15731.5 gi|73669575|ref|YP_305590.1| - 0.018 15.1 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_24 PF13412.6 gi|73669575|ref|YP_305590.1| - 0.053 13.1 0.3 0.4 10.3 0.0 2.5 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding DUF768 PF05589.11 gi|73669575|ref|YP_305590.1| - 0.11 12.6 0.0 0.26 11.3 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF768) TetR_N PF00440.23 gi|73669575|ref|YP_305590.1| - 0.11 12.3 0.0 0.45 10.3 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_23 PF13384.6 gi|73669575|ref|YP_305590.1| - 0.19 11.6 0.0 8.8 6.3 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain Aminotran_5 PF00266.19 gi|73669576|ref|YP_305591.1| - 6.5e-44 150.4 0.0 8.1e-44 150.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|73669576|ref|YP_305591.1| - 0.0025 17.1 0.0 0.0061 15.9 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|73669576|ref|YP_305591.1| - 0.0042 16.4 0.7 0.014 14.7 0.1 1.8 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family DMRL_synthase PF00885.19 gi|73669577|ref|YP_305592.1| - 3.4e-15 56.1 0.2 4.3e-15 55.8 0.2 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DMRL_synthase PF00885.19 gi|73669578|ref|YP_305593.1| - 3.2e-29 101.5 0.1 3.6e-29 101.4 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Aminotran_1_2 PF00155.21 gi|73669579|ref|YP_305594.1| - 3.8e-66 223.7 0.0 4.3e-66 223.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|73669579|ref|YP_305594.1| - 0.00081 18.0 0.0 0.0013 17.3 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|73669579|ref|YP_305594.1| - 0.0095 14.9 0.0 0.015 14.3 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Rsbr_N PF08678.10 gi|73669579|ref|YP_305594.1| - 0.021 14.9 0.0 0.25 11.4 0.0 2.4 2 1 0 2 2 2 0 Rsbr N terminal DegT_DnrJ_EryC1 PF01041.17 gi|73669579|ref|YP_305594.1| - 0.1 11.9 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family CTP_transf_like PF01467.26 gi|73669580|ref|YP_305595.1| - 1.2e-18 67.7 0.0 1.3e-18 67.6 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like HIGH_NTase1 PF05636.11 gi|73669580|ref|YP_305595.1| - 0.011 15.0 0.0 1.9 7.6 0.0 2.0 1 1 1 2 2 2 0 HIGH Nucleotidyl Transferase FAD_syn PF06574.12 gi|73669580|ref|YP_305595.1| - 0.022 14.6 0.1 0.13 12.1 0.1 2.2 1 1 0 1 1 1 0 FAD synthetase Urm1 PF09138.11 gi|73669580|ref|YP_305595.1| - 0.1 12.9 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) HcyBio PF01837.16 gi|73669581|ref|YP_305596.1| - 4.7e-144 479.5 0.2 6.1e-144 479.1 0.2 1.1 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation CBS PF00571.28 gi|73669581|ref|YP_305596.1| - 2.6e-22 79.0 0.1 1.2e-09 38.4 0.1 2.9 2 0 0 2 2 2 2 CBS domain Fer4 PF00037.27 gi|73669582|ref|YP_305597.1| - 1.3e-16 59.7 13.2 9.5e-09 34.7 2.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73669582|ref|YP_305597.1| - 8.4e-12 44.4 11.1 5.8e-06 26.1 2.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73669582|ref|YP_305597.1| - 9.9e-12 44.8 20.3 4.8e-09 36.3 10.5 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73669582|ref|YP_305597.1| - 5.3e-11 42.1 13.5 7.7e-06 25.8 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73669582|ref|YP_305597.1| - 3.5e-10 40.3 10.4 7.4e-10 39.3 10.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73669582|ref|YP_305597.1| - 2.6e-09 37.0 26.3 3.8e-07 30.1 14.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73669582|ref|YP_305597.1| - 2.7e-09 37.8 8.4 0.00051 20.9 2.4 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|73669582|ref|YP_305597.1| - 3.3e-08 33.9 4.5 0.0012 19.2 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73669582|ref|YP_305597.1| - 4.4e-08 33.1 13.2 0.00073 19.6 2.5 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73669582|ref|YP_305597.1| - 5.2e-08 33.3 11.6 0.00089 19.8 2.1 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|73669582|ref|YP_305597.1| - 5.7e-08 33.2 6.0 0.0015 19.0 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73669582|ref|YP_305597.1| - 3.9e-07 30.1 13.4 0.00052 20.3 3.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73669582|ref|YP_305597.1| - 6e-05 23.2 12.0 0.002 18.3 12.3 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain NIL PF09383.10 gi|73669582|ref|YP_305597.1| - 8.2e-05 22.4 0.1 0.00011 22.0 0.1 1.1 1 0 0 1 1 1 1 NIL domain Fer4_3 PF12798.7 gi|73669582|ref|YP_305597.1| - 0.00032 21.4 19.2 0.039 14.9 5.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|73669582|ref|YP_305597.1| - 0.0013 19.4 9.3 0.13 13.0 1.4 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|73669582|ref|YP_305597.1| - 0.017 16.0 12.8 0.47 11.3 2.1 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain DUF211 PF02680.14 gi|73669582|ref|YP_305597.1| - 0.031 14.4 1.6 0.19 11.9 1.6 2.0 1 1 0 1 1 1 0 Uncharacterized ArCR, COG1888 Fer4_19 PF06902.11 gi|73669582|ref|YP_305597.1| - 0.093 12.8 4.5 0.16 12.1 4.5 1.4 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster DUF166 PF02593.14 gi|73669583|ref|YP_305598.1| - 1.9e-70 236.8 0.0 2.2e-70 236.6 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function Big_9 PF17963.1 gi|73669584|ref|YP_305599.1| - 0.0048 17.6 0.0 0.0076 17.0 0.0 1.4 1 1 0 1 1 1 1 Bacterial Ig domain Cadherin_5 PF17892.1 gi|73669584|ref|YP_305599.1| - 0.025 14.5 0.0 0.04 13.9 0.0 1.4 1 0 0 1 1 1 0 Cadherin-like domain Mitoc_L55 PF09776.9 gi|73669584|ref|YP_305599.1| - 0.15 11.8 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L55 DUF498 PF04430.14 gi|73669585|ref|YP_305600.1| - 9.9e-14 51.3 0.0 1.1e-13 51.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) DUF4945 PF16303.5 gi|73669585|ref|YP_305600.1| - 0.018 14.9 0.1 0.028 14.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4945) MS_channel PF00924.18 gi|73669586|ref|YP_305601.1| - 1.4e-48 165.2 5.2 1.9e-48 164.7 5.2 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel TM_helix PF05552.12 gi|73669586|ref|YP_305601.1| - 0.034 14.1 0.8 0.034 14.1 0.8 2.4 2 0 0 2 2 2 0 Conserved TM helix MgtE PF01769.16 gi|73669586|ref|YP_305601.1| - 0.051 13.9 6.7 0.094 13.1 6.7 1.4 1 0 0 1 1 1 0 Divalent cation transporter Vac14_Fab1_bd PF12755.7 gi|73669587|ref|YP_305602.1| - 0.034 14.7 0.1 0.085 13.5 0.1 1.7 1 0 0 1 1 1 0 Vacuolar 14 Fab1-binding region DUF1515 PF07439.11 gi|73669587|ref|YP_305602.1| - 2.1 8.4 10.3 2.2 8.4 0.2 3.9 4 0 0 4 4 4 0 Protein of unknown function (DUF1515) Fib_alpha PF08702.10 gi|73669587|ref|YP_305602.1| - 3 8.0 24.5 6.9 6.8 5.2 4.0 1 1 2 4 4 4 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 gi|73669587|ref|YP_305602.1| - 3.5 6.4 39.5 0.9 8.4 10.5 3.1 2 1 1 3 3 3 0 Spc7 kinetochore protein PilJ PF13675.6 gi|73669587|ref|YP_305602.1| - 3.8 7.6 8.3 8.5 6.4 1.9 3.3 2 1 1 3 3 3 0 Type IV pili methyl-accepting chemotaxis transducer N-term tRNA-synt_2c PF01411.19 gi|73669588|ref|YP_305603.1| - 3e-16 59.0 0.0 4.7e-16 58.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|73669588|ref|YP_305603.1| - 7.3e-14 51.6 1.4 1.3e-13 50.8 1.4 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Nudix_N PF12535.8 gi|73669588|ref|YP_305603.1| - 0.035 13.7 0.0 0.074 12.7 0.0 1.5 1 0 0 1 1 1 0 Hydrolase of X-linked nucleoside diphosphate N terminal LPD22 PF18834.1 gi|73669588|ref|YP_305603.1| - 0.08 13.2 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Large polyvalent protein associated domain 22 Na_Ca_ex PF01699.24 gi|73669589|ref|YP_305604.1| - 1.6e-60 203.4 40.8 8.1e-31 107.0 17.6 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Flg_bb_rod PF00460.20 gi|73669589|ref|YP_305604.1| - 0.066 13.2 7.9 1.3 9.0 0.8 2.4 2 0 0 2 2 2 0 Flagella basal body rod protein DUF2795 PF11387.8 gi|73669590|ref|YP_305605.1| - 4.5e-17 62.0 0.1 5.5e-17 61.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) DUF2795 PF11387.8 gi|73669591|ref|YP_305606.1| - 8e-18 64.4 0.1 1e-17 64.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) Zn_ribbon_SprT PF17283.2 gi|73669592|ref|YP_305607.1| - 0.00017 21.4 0.8 0.00024 20.9 0.8 1.3 1 0 0 1 1 1 1 SprT-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|73669592|ref|YP_305607.1| - 0.01 15.9 3.8 0.013 15.6 3.8 1.2 1 0 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_6 PF14599.6 gi|73669592|ref|YP_305607.1| - 0.016 15.2 0.7 0.09 12.8 0.7 1.9 1 1 1 2 2 2 0 Zinc-ribbon Lar_restr_allev PF14354.6 gi|73669592|ref|YP_305607.1| - 0.068 13.6 2.3 0.11 12.9 2.3 1.6 1 1 0 1 1 1 0 Restriction alleviation protein Lar TIR_2 PF13676.6 gi|73669594|ref|YP_305609.1| - 9.1e-12 45.6 0.0 1.7e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 TIR domain CpXC PF14353.6 gi|73669594|ref|YP_305609.1| - 0.0017 18.4 1.3 0.012 15.6 1.6 2.1 1 1 1 2 2 2 1 CpXC protein PyrI_C PF02748.15 gi|73669594|ref|YP_305609.1| - 0.0018 18.1 3.5 0.86 9.6 0.3 2.3 1 1 1 2 2 2 2 Aspartate carbamoyltransferase regulatory chain, metal binding domain DZR PF12773.7 gi|73669594|ref|YP_305609.1| - 0.006 16.6 0.2 0.012 15.6 0.2 1.5 1 0 0 1 1 1 1 Double zinc ribbon Cys_rich_CPXG PF14255.6 gi|73669594|ref|YP_305609.1| - 0.0092 15.9 2.8 0.093 12.7 0.2 2.4 2 0 0 2 2 2 1 Cysteine-rich CPXCG zf-ribbon_3 PF13248.6 gi|73669594|ref|YP_305609.1| - 0.012 15.0 1.6 0.39 10.2 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DUF866 PF05907.13 gi|73669594|ref|YP_305609.1| - 0.035 14.0 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF866) Ribosomal_S27e PF01667.17 gi|73669594|ref|YP_305609.1| - 0.046 13.4 0.0 0.24 11.1 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein S27 Mu-like_Com PF10122.9 gi|73669594|ref|YP_305609.1| - 0.06 12.8 0.3 0.17 11.4 0.0 1.9 2 0 0 2 2 2 0 Mu-like prophage protein Com zinc_ribbon_4 PF13717.6 gi|73669594|ref|YP_305609.1| - 0.071 13.1 0.2 8.3 6.4 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zinc-ribbons_6 PF07191.12 gi|73669594|ref|YP_305609.1| - 0.12 12.4 0.9 0.26 11.3 0.9 1.6 1 0 0 1 1 1 0 zinc-ribbons HSP33 PF01430.19 gi|73669594|ref|YP_305609.1| - 0.15 11.4 0.1 0.22 10.9 0.1 1.2 1 0 0 1 1 1 0 Hsp33 protein zf-Di19 PF05605.12 gi|73669594|ref|YP_305609.1| - 0.22 11.8 3.5 2.6 8.4 3.5 2.4 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zinc_ribbon_2 PF13240.6 gi|73669594|ref|YP_305609.1| - 1.1 9.1 4.0 1.5 8.7 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-BED PF02892.15 gi|73669594|ref|YP_305609.1| - 1.8 8.6 10.2 1.9 8.6 0.1 2.6 2 1 1 3 3 2 0 BED zinc finger zf-C2H2_10 PF16588.5 gi|73669594|ref|YP_305609.1| - 6.7 6.5 10.8 5.2 6.9 0.8 2.7 3 0 0 3 3 3 0 C2H2 zinc-finger PIF6 PF05341.11 gi|73669595|ref|YP_305610.1| - 0.12 12.5 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Per os infectivity factor 6 Thi4 PF01946.17 gi|73669596|ref|YP_305611.1| - 8.1e-75 251.1 0.2 9.4e-75 250.9 0.2 1.0 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 gi|73669596|ref|YP_305611.1| - 1.6e-07 31.1 0.3 2.4e-07 30.5 0.3 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|73669596|ref|YP_305611.1| - 2.8e-06 26.8 0.1 3.6e-06 26.4 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|73669596|ref|YP_305611.1| - 1.1e-05 24.8 1.9 0.00012 21.3 0.7 2.1 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|73669596|ref|YP_305611.1| - 1.3e-05 25.3 0.4 3.5e-05 23.9 0.4 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|73669596|ref|YP_305611.1| - 0.00038 19.3 0.6 0.0008 18.2 0.8 1.4 1 1 0 1 1 1 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|73669596|ref|YP_305611.1| - 0.00064 19.1 0.1 0.00073 18.9 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|73669596|ref|YP_305611.1| - 0.0065 16.1 2.5 0.027 14.0 2.4 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|73669596|ref|YP_305611.1| - 0.017 14.2 0.6 0.027 13.6 0.6 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Amino_oxidase PF01593.24 gi|73669596|ref|YP_305611.1| - 0.061 12.6 0.2 0.11 11.8 0.2 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|73669596|ref|YP_305611.1| - 0.11 11.5 0.4 0.19 10.7 0.4 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein MCRA PF06100.11 gi|73669596|ref|YP_305611.1| - 0.13 11.1 0.1 0.21 10.4 0.1 1.4 1 0 0 1 1 1 0 MCRA family Radical_SAM PF04055.21 gi|73669597|ref|YP_305612.1| - 2e-10 41.3 0.0 5.3e-10 39.9 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily HHH_3 PF12836.7 gi|73669597|ref|YP_305612.1| - 0.00068 19.8 0.0 0.0015 18.8 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|73669597|ref|YP_305612.1| - 0.015 15.2 0.0 0.036 13.9 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|73669597|ref|YP_305612.1| - 0.023 15.3 0.0 0.065 13.8 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain E1-E2_ATPase PF00122.20 gi|73669599|ref|YP_305614.1| - 1.1e-49 168.5 0.3 1.1e-49 168.5 0.3 3.3 4 1 0 4 4 4 1 E1-E2 ATPase Hydrolase PF00702.26 gi|73669599|ref|YP_305614.1| - 2.7e-20 73.5 0.1 9.8e-20 71.7 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|73669599|ref|YP_305614.1| - 4.1e-19 68.0 0.1 9.7e-19 66.8 0.1 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase_C PF00689.21 gi|73669599|ref|YP_305614.1| - 1.4e-18 67.2 9.6 1.4e-18 67.2 9.6 2.0 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Cation_ATPase PF13246.6 gi|73669599|ref|YP_305614.1| - 1.2e-05 25.2 0.0 3.2e-05 23.9 0.0 1.7 1 0 0 1 1 1 1 Cation transport ATPase (P-type) HAD PF12710.7 gi|73669599|ref|YP_305614.1| - 0.018 15.4 0.0 0.047 14.1 0.0 1.8 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|73669599|ref|YP_305614.1| - 0.019 14.7 0.6 0.019 14.7 0.6 2.9 2 1 1 3 3 3 0 haloacid dehalogenase-like hydrolase DAHP_snth_FXD PF18152.1 gi|73669599|ref|YP_305614.1| - 0.029 14.2 0.1 0.1 12.4 0.1 1.9 1 0 0 1 1 1 0 DAHP synthase ferredoxin-like domain FlgD_ig PF13860.6 gi|73669601|ref|YP_305616.1| - 0.81 9.6 5.6 34 4.4 0.0 4.9 5 1 0 5 5 5 0 FlgD Ig-like domain SSP160 PF06933.11 gi|73669602|ref|YP_305617.1| - 0.2 9.8 13.3 0.24 9.6 13.3 1.3 1 1 0 1 1 1 0 Special lobe-specific silk protein SSP160 Secretin_N_2 PF07655.13 gi|73669602|ref|YP_305617.1| - 1.3 9.7 25.7 1.3 9.6 18.6 2.4 2 0 0 2 2 2 0 Secretin N-terminal domain Presenilin PF01080.17 gi|73669602|ref|YP_305617.1| - 2.8 6.6 5.6 0.52 9.0 2.4 1.4 2 0 0 2 2 2 0 Presenilin Invasin_D3 PF09134.10 gi|73669603|ref|YP_305618.1| - 1.9e-06 28.1 5.4 5e-05 23.5 1.2 2.5 2 1 0 2 2 2 2 Invasin, domain 3 Y_Y_Y PF07495.13 gi|73669603|ref|YP_305618.1| - 0.018 15.0 0.2 6 6.9 0.0 2.4 2 0 0 2 2 2 0 Y_Y_Y domain CBM_6 PF03422.15 gi|73669603|ref|YP_305618.1| - 0.068 13.5 2.0 21 5.4 0.1 3.2 2 1 1 3 3 3 0 Carbohydrate binding module (family 6) Big_1 PF02369.16 gi|73669603|ref|YP_305618.1| - 0.83 9.7 4.2 3 7.9 1.1 3.2 2 1 0 2 2 2 0 Bacterial Ig-like domain (group 1) Big_7 PF17957.1 gi|73669603|ref|YP_305618.1| - 0.89 10.4 7.3 0.93 10.3 0.3 3.1 2 1 1 3 3 3 0 Bacterial Ig domain DUF11 PF01345.18 gi|73669604|ref|YP_305619.1| - 0.0084 16.4 1.4 0.019 15.3 0.5 2.0 2 0 0 2 2 2 1 Domain of unknown function DUF11 PGF-CTERM PF18204.1 gi|73669604|ref|YP_305619.1| - 0.44 10.6 9.0 0.083 12.9 1.3 2.6 2 1 0 2 2 2 0 PGF-CTERM motif HEAT_2 PF13646.6 gi|73669605|ref|YP_305620.1| - 6e-34 116.3 5.3 2.5e-11 43.8 0.3 3.6 2 1 3 5 5 5 4 HEAT repeats HEAT PF02985.22 gi|73669605|ref|YP_305620.1| - 3e-22 76.8 5.0 0.00055 20.0 0.1 6.5 6 0 0 6 6 6 5 HEAT repeat Cnd1 PF12717.7 gi|73669605|ref|YP_305620.1| - 3.6e-10 40.1 0.8 0.0021 18.1 0.0 3.7 1 1 3 4 4 4 4 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.8 gi|73669605|ref|YP_305620.1| - 5.7e-06 26.1 0.2 0.075 12.6 0.3 2.9 1 1 2 3 3 3 3 CLASP N terminal HEAT_EZ PF13513.6 gi|73669605|ref|YP_305620.1| - 7.8e-06 26.3 11.8 0.073 13.6 0.1 5.6 5 1 1 6 6 6 2 HEAT-like repeat Vac14_Fab1_bd PF12755.7 gi|73669605|ref|YP_305620.1| - 1.2e-05 25.8 1.2 6.7 7.4 0.0 5.1 3 1 2 5 5 5 1 Vacuolar 14 Fab1-binding region DNA_alkylation PF08713.11 gi|73669605|ref|YP_305620.1| - 0.00012 21.9 4.3 0.0003 20.6 3.8 1.9 1 1 1 2 2 2 1 DNA alkylation repair enzyme V-ATPase_H_N PF03224.14 gi|73669605|ref|YP_305620.1| - 0.0014 18.0 7.0 0.075 12.3 0.2 2.6 1 1 0 2 2 2 2 V-ATPase subunit H DUF2884 PF11101.8 gi|73669605|ref|YP_305620.1| - 0.034 13.6 1.6 0.27 10.7 0.4 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF2884) OKR_DC_1_N PF03709.15 gi|73669605|ref|YP_305620.1| - 0.038 14.3 0.1 1.3 9.3 0.0 2.4 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain bMG1 PF17970.1 gi|73669605|ref|YP_305620.1| - 0.059 13.4 2.3 5.7 7.1 0.1 3.9 1 1 4 5 5 5 0 Bacterial Alpha-2-macroglobulin MG1 domain RhoGEF PF00621.20 gi|73669605|ref|YP_305620.1| - 0.11 12.7 4.6 0.1 12.8 2.2 2.0 2 0 0 2 2 2 0 RhoGEF domain FAA_hydrolase_N PF09298.11 gi|73669605|ref|YP_305620.1| - 0.17 12.1 5.0 2.3 8.4 0.7 3.8 1 1 2 3 3 3 0 Fumarylacetoacetase N-terminal SMBP PF16785.5 gi|73669605|ref|YP_305620.1| - 0.61 10.3 3.6 4.3 7.6 1.1 2.4 2 0 0 2 2 2 0 Small metal-binding protein ARHGEF5_35 PF15441.6 gi|73669605|ref|YP_305620.1| - 1.3 7.9 4.9 1.7 7.6 0.3 2.8 3 0 0 3 3 3 0 Rho guanine nucleotide exchange factor 5/35 TPR_12 PF13424.6 gi|73669605|ref|YP_305620.1| - 5 7.5 5.6 9.2 6.6 0.1 3.5 4 0 0 4 4 4 0 Tetratricopeptide repeat AAA_23 PF13476.6 gi|73669605|ref|YP_305620.1| - 8.5 6.8 10.9 26 5.2 10.2 2.1 1 1 0 1 1 1 0 AAA domain InaF-motif PF15018.6 gi|73669606|ref|YP_305621.1| - 0.011 15.6 5.6 0.03 14.2 5.6 1.7 1 0 0 1 1 1 0 TRP-interacting helix UL42 PF17638.2 gi|73669606|ref|YP_305621.1| - 0.23 11.4 1.5 0.32 11.0 0.3 1.8 2 0 0 2 2 2 0 HCMV UL42 DHHA1 PF02272.19 gi|73669607|ref|YP_305622.1| - 2.9e-16 60.2 1.7 4.6e-16 59.5 0.1 2.2 3 0 0 3 3 3 1 DHHA1 domain DHH PF01368.20 gi|73669607|ref|YP_305622.1| - 0.00018 21.7 0.1 0.00038 20.6 0.1 1.5 1 0 0 1 1 1 1 DHH family EIIA-man PF03610.16 gi|73669607|ref|YP_305622.1| - 0.036 14.3 0.1 0.17 12.1 0.0 2.2 2 0 0 2 2 2 0 PTS system fructose IIA component Pcc1 PF09341.10 gi|73669608|ref|YP_305623.1| - 0.0021 18.2 0.0 0.0031 17.6 0.0 1.2 1 0 0 1 1 1 1 Transcription factor Pcc1 Lectin_like PF18560.1 gi|73669609|ref|YP_305624.1| - 1.6e-53 181.1 0.4 1.6e-53 181.1 0.4 2.9 3 0 0 3 3 3 1 Lectin like domain Peptidase_C1 PF00112.23 gi|73669609|ref|YP_305624.1| - 3.4e-28 99.2 0.1 6.5e-28 98.3 0.1 1.5 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.20 gi|73669609|ref|YP_305624.1| - 1.9e-07 30.8 3.0 8.2e-07 28.8 0.5 3.2 3 0 0 3 3 3 1 PKD domain Peptidase_C1_2 PF03051.15 gi|73669609|ref|YP_305624.1| - 0.0056 15.5 0.1 1.1 7.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Rubrerythrin PF02915.17 gi|73669610|ref|YP_305625.1| - 9.4e-09 35.8 1.6 1.2e-08 35.5 1.6 1.1 1 0 0 1 1 1 1 Rubrerythrin COQ7 PF03232.13 gi|73669610|ref|YP_305625.1| - 1.2e-05 25.1 0.3 1.5e-05 24.9 0.3 1.1 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 Ferritin_2 PF13668.6 gi|73669610|ref|YP_305625.1| - 0.00024 21.3 0.7 0.0003 21.0 0.7 1.1 1 0 0 1 1 1 1 Ferritin-like domain DUF2383 PF09537.10 gi|73669610|ref|YP_305625.1| - 0.0093 16.3 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) Coat_F PF07875.12 gi|73669610|ref|YP_305625.1| - 0.1 12.9 0.2 0.14 12.4 0.2 1.3 1 0 0 1 1 1 0 Coat F domain LigD_N PF13298.6 gi|73669611|ref|YP_305626.1| - 6.9e-37 125.9 0.0 8.8e-37 125.6 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase Ligase (LigD) DUF4325 PF14213.6 gi|73669612|ref|YP_305627.1| - 3.6e-13 49.0 0.0 5.1e-13 48.5 0.0 1.2 1 0 0 1 1 1 1 STAS-like domain of unknown function (DUF4325) PIN PF01850.21 gi|73669613|ref|YP_305628.1| - 2.2e-11 44.3 0.0 8e-11 42.5 0.0 1.8 1 1 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|73669613|ref|YP_305628.1| - 0.00035 21.1 0.7 0.045 14.2 0.7 2.2 1 1 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|73669613|ref|YP_305628.1| - 0.001 18.8 0.1 0.0019 17.9 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) PIN_3 PF13470.6 gi|73669613|ref|YP_305628.1| - 0.011 16.5 0.0 0.019 15.7 0.0 1.4 1 1 0 1 1 1 0 PIN domain PIN_8 PF18476.1 gi|73669613|ref|YP_305628.1| - 0.022 14.6 0.0 0.076 12.9 0.0 1.7 1 1 0 2 2 2 0 PIN like domain DUF538 PF04398.12 gi|73669615|ref|YP_305630.1| - 0.0054 17.2 0.2 0.0072 16.8 0.2 1.4 1 1 0 1 1 1 1 Protein of unknown function, DUF538 DUF3958 PF13125.6 gi|73669615|ref|YP_305630.1| - 0.095 12.9 6.2 0.42 10.8 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3958) YusW PF14039.6 gi|73669615|ref|YP_305630.1| - 0.1 13.1 6.5 0.12 12.9 1.9 2.2 1 1 1 2 2 2 0 YusW-like protein Ribosomal_L29 PF00831.23 gi|73669615|ref|YP_305630.1| - 3.2 7.8 7.4 35 4.5 2.0 3.0 2 1 0 2 2 2 0 Ribosomal L29 protein HicB_lk_antitox PF15919.5 gi|73669616|ref|YP_305631.1| - 2.9e-06 27.4 0.1 3.1e-06 27.3 0.1 1.1 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system PHD_like PF12910.7 gi|73669616|ref|YP_305631.1| - 0.00039 20.5 0.1 0.00048 20.2 0.1 1.1 1 0 0 1 1 1 1 Antitoxin of toxin-antitoxin, RelE / RelB, TA system TPR_11 PF13414.6 gi|73669616|ref|YP_305631.1| - 0.033 13.9 0.6 0.049 13.3 0.6 1.3 1 0 0 1 1 1 0 TPR repeat HicA_toxin PF07927.12 gi|73669617|ref|YP_305632.1| - 1.5e-19 69.7 0.7 2e-19 69.4 0.7 1.2 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, B5 PF03484.15 gi|73669617|ref|YP_305632.1| - 0.0072 16.6 0.2 0.059 13.7 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetase B5 domain Dioxygenase_N PF04444.14 gi|73669617|ref|YP_305632.1| - 0.11 12.3 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Catechol dioxygenase N terminus HicB_lk_antitox PF15919.5 gi|73669618|ref|YP_305633.1| - 5.9e-13 49.0 0.0 6.4e-13 48.9 0.0 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF1902 PF08972.11 gi|73669618|ref|YP_305633.1| - 2.1e-05 24.4 0.0 2.1e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) HNH PF01844.23 gi|73669619|ref|YP_305634.1| - 9e-08 32.2 0.3 2.4e-07 30.8 0.3 1.8 1 0 0 1 1 1 1 HNH endonuclease Rad50_zn_hook PF04423.14 gi|73669619|ref|YP_305634.1| - 0.0018 18.0 0.3 0.0095 15.8 0.0 2.2 2 0 0 2 2 2 1 Rad50 zinc hook motif PvlArgDC PF01862.16 gi|73669620|ref|YP_305635.1| - 2.9e-07 30.4 0.0 3.6e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Lactamase_B PF00753.27 gi|73669621|ref|YP_305636.1| - 3.7e-12 46.6 0.0 9.5e-12 45.3 0.0 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|73669621|ref|YP_305636.1| - 0.00012 21.7 0.0 0.00018 21.1 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|73669621|ref|YP_305636.1| - 0.024 14.5 0.0 0.039 13.8 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Spo7_2_N PF15407.6 gi|73669621|ref|YP_305636.1| - 0.047 13.3 0.0 0.086 12.5 0.0 1.4 1 0 0 1 1 1 0 Sporulation protein family 7 tRNA_bind_4 PF18490.1 gi|73669622|ref|YP_305637.1| - 3.8e-59 199.1 0.1 5.7e-59 198.5 0.1 1.2 1 0 0 1 1 1 1 tRNA-binding domain tRNA-synt_2b PF00587.25 gi|73669622|ref|YP_305637.1| - 5.3e-06 26.5 0.0 1.5e-05 25.0 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Ribosomal_S3Ae PF01015.18 gi|73669623|ref|YP_305638.1| - 2.7e-65 219.7 2.4 3.2e-65 219.5 2.4 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family Topoisom_bac PF01131.20 gi|73669624|ref|YP_305639.1| - 1.9e-106 356.5 0.1 2.9e-106 356.0 0.1 1.3 1 0 0 1 1 1 1 DNA topoisomerase zf-C4_Topoisom PF01396.19 gi|73669624|ref|YP_305639.1| - 1.3e-14 53.7 10.7 2.3e-10 40.1 0.5 3.6 3 0 0 3 3 3 2 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.22 gi|73669624|ref|YP_305639.1| - 1.7e-14 53.9 0.4 1e-13 51.4 0.0 2.5 3 0 0 3 3 3 1 Toprim domain Auto_anti-p27 PF06677.12 gi|73669624|ref|YP_305639.1| - 0.021 15.0 0.1 0.021 15.0 0.1 2.6 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) OEP PF02321.18 gi|73669624|ref|YP_305639.1| - 0.028 14.2 0.0 0.057 13.2 0.0 1.4 1 0 0 1 1 1 0 Outer membrane efflux protein Toprim_2 PF13155.6 gi|73669624|ref|YP_305639.1| - 0.17 12.3 0.1 0.88 10.0 0.0 2.2 3 0 0 3 3 3 0 Toprim-like DUF3409 PF11889.8 gi|73669624|ref|YP_305639.1| - 8.1 6.4 11.9 8.6 6.3 0.1 3.7 3 0 0 3 3 3 0 Domain of unknown function (DUF3409) DUF1451 PF07295.11 gi|73669624|ref|YP_305639.1| - 9.9 6.2 9.7 1.4 9.0 0.8 3.1 3 0 0 3 3 3 0 Zinc-ribbon containing domain ThiC_Rad_SAM PF01964.18 gi|73669625|ref|YP_305640.1| - 1.2e-184 614.0 0.0 1.4e-184 613.8 0.0 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family SO_alpha_A3 PF17806.1 gi|73669626|ref|YP_305641.1| - 0.18 12.2 0.2 4.1 7.8 0.0 2.8 2 1 1 3 3 3 0 Sarcosine oxidase A3 domain DUF2156 PF09924.9 gi|73669627|ref|YP_305642.1| - 1.3e-48 165.6 0.0 1.5e-48 165.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2156) Acetyltransf_1 PF00583.25 gi|73669628|ref|YP_305643.1| - 4.8e-19 68.7 0.0 6.5e-19 68.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73669628|ref|YP_305643.1| - 7.7e-12 45.5 0.0 1.2e-11 44.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73669628|ref|YP_305643.1| - 6.4e-10 39.1 0.0 8.8e-10 38.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73669628|ref|YP_305643.1| - 4.1e-06 26.7 0.0 6e-05 22.9 0.0 2.0 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_CG PF14542.6 gi|73669628|ref|YP_305643.1| - 0.00012 22.2 0.0 0.00022 21.3 0.0 1.5 1 1 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 gi|73669628|ref|YP_305643.1| - 0.021 14.3 0.0 0.021 14.3 0.0 1.2 1 0 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_6 PF13480.7 gi|73669628|ref|YP_305643.1| - 0.14 12.3 0.0 0.29 11.3 0.0 1.5 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF3303 PF11746.8 gi|73669629|ref|YP_305644.1| - 7.1e-05 23.0 0.1 0.00036 20.8 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3303) HSBP1 PF06825.12 gi|73669629|ref|YP_305644.1| - 0.031 14.1 0.0 0.069 13.0 0.0 1.5 1 0 0 1 1 1 0 Heat shock factor binding protein 1 NigD_N PF12667.7 gi|73669629|ref|YP_305644.1| - 0.04 14.0 0.1 0.069 13.3 0.1 1.4 1 0 0 1 1 1 0 NigD-like N-terminal OB domain DUF2357 PF09823.9 gi|73669629|ref|YP_305644.1| - 0.061 12.6 0.3 0.083 12.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2357) BLOC1_2 PF10046.9 gi|73669629|ref|YP_305644.1| - 0.15 12.4 0.7 0.31 11.4 0.7 1.6 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 MRF_C1 PF13887.6 gi|73669629|ref|YP_305644.1| - 0.16 11.1 0.3 0.33 10.1 0.3 1.6 1 0 0 1 1 1 0 Myelin gene regulatory factor -C-terminal domain 1 DUF3344 PF11824.8 gi|73669630|ref|YP_305645.1| - 3.4e-135 450.0 39.3 2.6e-71 240.5 16.8 4.9 5 1 0 5 5 5 2 Protein of unknown function (DUF3344) PKD PF00801.20 gi|73669630|ref|YP_305645.1| - 1.6e-68 226.5 45.6 7.4e-15 54.6 2.0 6.2 6 0 0 6 6 6 5 PKD domain CARDB PF07705.11 gi|73669630|ref|YP_305645.1| - 1.6e-18 66.9 12.8 1.6e-18 66.9 12.8 6.2 8 2 1 9 9 9 1 CARDB MG2 PF01835.19 gi|73669630|ref|YP_305645.1| - 3.2e-08 33.9 14.3 0.048 14.1 0.2 5.9 3 1 2 5 5 5 4 MG2 domain PKD_3 PF16820.5 gi|73669630|ref|YP_305645.1| - 2.5e-05 23.9 11.3 0.27 11.0 0.4 5.8 6 0 0 6 6 6 2 PKD-like domain DUF3324 PF11797.8 gi|73669630|ref|YP_305645.1| - 0.16 11.9 20.0 11 6.0 0.2 7.3 7 1 1 8 8 8 0 Protein of unknown function C-terminal (DUF3324) DUF2381 PF09544.10 gi|73669630|ref|YP_305645.1| - 0.28 10.7 1.6 1.2e+02 2.1 0.0 4.3 5 0 0 5 5 5 0 Protein of unknown function (DUF2381) Methyltransf_23 PF13489.6 gi|73669631|ref|YP_305646.1| - 1.9e-05 24.6 0.0 2.8e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669631|ref|YP_305646.1| - 3.2e-05 23.8 0.0 4.6e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669631|ref|YP_305646.1| - 0.0022 18.6 0.0 0.0039 17.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|73669631|ref|YP_305646.1| - 0.007 16.0 0.1 0.013 15.1 0.1 1.5 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_12 PF08242.12 gi|73669631|ref|YP_305646.1| - 0.079 13.7 0.0 0.15 12.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73669631|ref|YP_305646.1| - 0.12 13.1 0.0 0.21 12.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Glycos_transf_1 PF00534.20 gi|73669632|ref|YP_305647.1| - 1.6e-22 79.8 0.0 2.8e-22 79.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73669632|ref|YP_305647.1| - 9.7e-20 71.4 0.0 1.6e-19 70.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|73669632|ref|YP_305647.1| - 0.007 16.7 0.0 0.012 16.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Polysacc_synt PF01943.17 gi|73669633|ref|YP_305648.1| - 4.1e-32 111.7 30.1 4.1e-32 111.7 30.1 2.7 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|73669633|ref|YP_305648.1| - 2.1e-24 86.3 23.1 2.1e-24 86.3 23.1 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|73669633|ref|YP_305648.1| - 6.3e-21 74.9 66.7 4.8e-15 55.9 26.2 3.5 3 1 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|73669633|ref|YP_305648.1| - 7.4e-11 42.0 32.5 4.2e-07 29.8 12.1 3.9 3 2 0 3 3 3 2 MatE MurJ PF03023.14 gi|73669633|ref|YP_305648.1| - 9.3e-07 27.8 50.5 9.3e-07 27.8 50.5 1.5 1 1 0 1 1 1 1 Lipid II flippase MurJ Epimerase_2 PF02350.19 gi|73669634|ref|YP_305649.1| - 3.2e-109 365.0 0.0 3.9e-109 364.7 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_9 PF01075.17 gi|73669634|ref|YP_305649.1| - 0.015 14.6 0.0 0.042 13.2 0.0 1.6 1 1 0 1 1 1 0 Glycosyltransferase family 9 (heptosyltransferase) Glyco_trans_4_2 PF13477.6 gi|73669634|ref|YP_305649.1| - 0.026 14.6 0.0 0.13 12.3 0.0 2.1 2 0 0 2 2 2 0 Glycosyl transferase 4-like WLM PF08325.10 gi|73669634|ref|YP_305649.1| - 0.026 14.6 0.0 0.038 14.1 0.0 1.4 1 0 0 1 1 1 0 WLM domain Glyco_transf_4 PF13439.6 gi|73669634|ref|YP_305649.1| - 0.07 13.1 0.0 6.3 6.8 0.0 2.3 2 0 0 2 2 2 0 Glycosyltransferase Family 4 LuxS PF02664.15 gi|73669634|ref|YP_305649.1| - 0.096 12.4 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 S-Ribosylhomocysteinase (LuxS) Glycos_transf_1 PF00534.20 gi|73669635|ref|YP_305650.1| - 1.1e-29 103.1 0.2 1.9e-29 102.4 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73669635|ref|YP_305650.1| - 1.8e-28 99.6 0.0 2.9e-28 98.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73669635|ref|YP_305650.1| - 1e-16 61.4 0.0 1.6e-16 60.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|73669635|ref|YP_305650.1| - 3.1e-09 37.1 0.0 5.6e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|73669635|ref|YP_305650.1| - 2.5e-05 24.8 0.0 5e-05 23.8 0.0 1.4 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain DUF2195 PF09961.9 gi|73669635|ref|YP_305650.1| - 0.098 12.6 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2195) B12-binding PF02310.19 gi|73669636|ref|YP_305651.1| - 8.7e-20 71.0 0.3 1.1e-19 70.7 0.3 1.1 1 0 0 1 1 1 1 B12 binding domain PTS_IIB PF02302.17 gi|73669636|ref|YP_305651.1| - 0.11 13.2 1.8 0.51 11.1 0.2 2.2 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit NosD PF05048.13 gi|73669637|ref|YP_305652.1| - 2e-81 272.8 96.2 3.6e-38 131.2 27.5 4.1 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73669637|ref|YP_305652.1| - 5e-50 169.4 100.5 5.1e-16 58.9 14.4 4.2 1 1 3 4 4 4 4 Right handed beta helix region Pectinesterase PF01095.19 gi|73669637|ref|YP_305652.1| - 0.0003 19.6 0.0 0.00088 18.1 0.0 1.7 1 0 0 1 1 1 1 Pectinesterase CobN-Mg_chel PF02514.16 gi|73669638|ref|YP_305653.1| - 5.1e-292 971.6 0.0 7.4e-292 971.0 0.0 1.2 1 0 0 1 1 1 1 CobN/Magnesium Chelatase DUF4604 PF15377.6 gi|73669638|ref|YP_305653.1| - 1.8 8.9 8.2 3.1 8.2 8.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) CbiM PF01891.16 gi|73669639|ref|YP_305654.1| - 1.6e-53 181.6 19.8 1.8e-53 181.4 19.8 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region PEPCK_GTP PF00821.18 gi|73669639|ref|YP_305654.1| - 0.25 10.1 0.0 0.31 9.8 0.0 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CbiN PF02553.15 gi|73669640|ref|YP_305655.1| - 4e-26 90.8 0.2 4.9e-26 90.5 0.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN DUF3552 PF12072.8 gi|73669640|ref|YP_305655.1| - 0.092 12.2 0.0 3.7 6.9 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) Cation_efflux PF01545.21 gi|73669641|ref|YP_305656.1| - 7.9e-41 140.0 12.0 1e-40 139.6 12.0 1.2 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|73669641|ref|YP_305656.1| - 1.1e-16 60.7 0.5 2.3e-16 59.7 0.5 1.5 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Cation_ATPase_C PF00689.21 gi|73669641|ref|YP_305656.1| - 0.47 10.2 7.7 38 3.9 7.7 2.5 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF2104 PF09877.9 gi|73669641|ref|YP_305656.1| - 1.6 9.1 6.4 0.47 10.7 0.3 2.7 2 2 0 2 2 2 0 Predicted membrane protein (DUF2104) CbiQ PF02361.16 gi|73669642|ref|YP_305657.1| - 2.8e-40 138.3 10.9 2.8e-40 138.3 10.9 1.4 2 0 0 2 2 2 1 Cobalt transport protein OstA_2 PF13100.6 gi|73669642|ref|YP_305657.1| - 0.24 11.0 0.0 0.39 10.3 0.0 1.3 1 0 0 1 1 1 0 OstA-like protein ABC_tran PF00005.27 gi|73669643|ref|YP_305658.1| - 3.4e-32 111.8 0.0 5.6e-32 111.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669643|ref|YP_305658.1| - 1.1e-12 48.4 1.0 1.1e-07 32.0 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73669643|ref|YP_305658.1| - 4e-06 26.4 0.0 1.1e-05 25.0 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73669643|ref|YP_305658.1| - 0.00077 19.2 0.1 0.0016 18.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|73669643|ref|YP_305658.1| - 0.0021 18.0 0.2 0.022 14.7 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_15 PF13175.6 gi|73669643|ref|YP_305658.1| - 0.004 16.9 0.1 0.017 14.9 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|73669643|ref|YP_305658.1| - 0.0089 16.5 0.0 0.016 15.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain MAF_flag10 PF01973.18 gi|73669643|ref|YP_305658.1| - 0.058 13.1 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function DUF115 AAA_7 PF12775.7 gi|73669643|ref|YP_305658.1| - 0.084 12.4 0.0 0.21 11.1 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region DUF2813 PF11398.8 gi|73669643|ref|YP_305658.1| - 0.15 11.3 0.0 0.23 10.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) DUF150_C PF17384.2 gi|73669644|ref|YP_305659.1| - 0.12 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 RimP C-terminal SH3 domain FliMN_C PF01052.20 gi|73669644|ref|YP_305659.1| - 0.17 11.9 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Type III flagellar switch regulator (C-ring) FliN C-term DrsE PF02635.15 gi|73669645|ref|YP_305660.1| - 2.8e-10 40.6 0.0 3.4e-10 40.3 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|73669645|ref|YP_305660.1| - 9.8e-10 38.5 0.1 1.1e-09 38.4 0.1 1.1 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|73669647|ref|YP_305662.1| - 8.9e-10 39.0 0.0 1e-09 38.8 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|73669647|ref|YP_305662.1| - 2.1e-09 37.4 0.0 2.2e-09 37.4 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family DUF150_C PF17384.2 gi|73669648|ref|YP_305663.1| - 0.046 13.8 0.0 0.059 13.5 0.0 1.2 1 0 0 1 1 1 0 RimP C-terminal SH3 domain APH PF01636.23 gi|73669649|ref|YP_305664.1| - 1.3e-16 61.3 0.0 1.7e-16 60.9 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 gi|73669649|ref|YP_305664.1| - 0.0037 16.6 0.1 0.007 15.7 0.1 1.7 1 1 0 1 1 1 1 Ecdysteroid kinase Choline_kinase PF01633.20 gi|73669649|ref|YP_305664.1| - 0.0093 15.6 0.1 0.014 15.0 0.1 1.3 1 0 0 1 1 1 1 Choline/ethanolamine kinase PEGA PF08308.11 gi|73669650|ref|YP_305665.1| - 0.078 12.9 0.1 0.088 12.7 0.1 1.1 1 0 0 1 1 1 0 PEGA domain GATase_3 PF07685.14 gi|73669652|ref|YP_305667.1| - 4.9e-31 107.9 0.0 7.2e-31 107.3 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|73669652|ref|YP_305667.1| - 2.1e-22 79.5 0.0 3.4e-22 78.8 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|73669652|ref|YP_305667.1| - 4.4e-22 78.9 3.2 6.5e-20 71.8 3.2 2.3 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 gi|73669652|ref|YP_305667.1| - 0.0042 16.9 0.7 0.95 9.2 0.1 2.4 1 1 1 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_31 PF13614.6 gi|73669652|ref|YP_305667.1| - 0.047 13.6 0.0 0.088 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF1611 PF07755.11 gi|73669652|ref|YP_305667.1| - 0.062 12.6 0.7 0.18 11.1 0.7 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain ocr PF08684.10 gi|73669652|ref|YP_305667.1| - 0.098 13.1 0.1 0.27 11.7 0.1 1.7 1 0 0 1 1 1 0 DNA mimic ocr ParA PF10609.9 gi|73669652|ref|YP_305667.1| - 0.13 11.7 0.7 0.24 10.8 0.7 1.4 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase AAA_19 PF13245.6 gi|73669652|ref|YP_305667.1| - 0.17 12.2 0.0 0.28 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain FTHFS PF01268.19 gi|73669652|ref|YP_305667.1| - 0.19 9.9 0.2 0.29 9.3 0.2 1.2 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase MobB PF03205.14 gi|73669652|ref|YP_305667.1| - 0.29 11.0 1.1 1.7 8.6 0.1 2.2 2 1 1 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B FliE PF02049.18 gi|73669653|ref|YP_305668.1| - 0.034 14.3 0.2 0.045 13.9 0.2 1.2 1 0 0 1 1 1 0 Flagellar hook-basal body complex protein FliE eIF-1a PF01176.19 gi|73669654|ref|YP_305669.1| - 6e-11 42.0 0.7 7.9e-11 41.6 0.7 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Zn_ribbon_SprT PF17283.2 gi|73669655|ref|YP_305670.1| - 0.00015 21.6 0.3 0.00022 21.1 0.3 1.2 1 0 0 1 1 1 1 SprT-like zinc ribbon domain zinc_ribbon_6 PF14599.6 gi|73669655|ref|YP_305670.1| - 0.053 13.5 0.6 0.12 12.4 0.6 1.6 1 1 1 2 2 2 0 Zinc-ribbon DDE_3 PF13358.6 gi|73669656|ref|YP_305671.1| - 1.3e-09 37.9 0.0 2e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF815 PF05673.13 gi|73669656|ref|YP_305671.1| - 0.029 13.5 0.1 0.034 13.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF815) MIX PF18529.1 gi|73669656|ref|YP_305671.1| - 0.086 12.5 0.0 0.097 12.4 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins NOG1_N PF17835.1 gi|73669657|ref|YP_305672.1| - 2.8e-48 163.9 0.4 4.6e-48 163.2 0.4 1.3 1 0 0 1 1 1 1 NOG1 N-terminal helical domain NOG1 PF06858.14 gi|73669657|ref|YP_305672.1| - 2.2e-22 78.6 0.1 4.2e-22 77.7 0.1 1.5 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 gi|73669657|ref|YP_305672.1| - 3.2e-19 69.1 0.0 1.1e-18 67.3 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|73669657|ref|YP_305672.1| - 2.2e-11 43.5 0.0 4.4e-11 42.5 0.0 1.6 1 0 0 1 1 1 1 Ferrous iron transport protein B Arf PF00025.21 gi|73669657|ref|YP_305672.1| - 1.9e-05 24.2 0.1 0.00031 20.3 0.1 2.6 1 1 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 gi|73669657|ref|YP_305672.1| - 0.00085 19.3 0.2 0.027 14.4 0.0 2.7 2 1 0 2 2 2 1 RsgA GTPase GTP_EFTU PF00009.27 gi|73669657|ref|YP_305672.1| - 0.002 17.7 0.0 0.016 14.8 0.0 2.2 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain MeaB PF03308.16 gi|73669657|ref|YP_305672.1| - 0.031 13.3 0.0 1.9 7.4 0.0 2.7 2 1 1 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AIG1 PF04548.16 gi|73669657|ref|YP_305672.1| - 0.1 11.9 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 AIG1 family HrcA_DNA-bdg PF03444.15 gi|73669658|ref|YP_305673.1| - 2.9e-38 129.4 0.4 7.6e-38 128.0 0.4 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.28 gi|73669658|ref|YP_305673.1| - 4.3e-23 81.5 0.6 6.7e-11 42.5 0.0 2.5 2 0 0 2 2 2 2 CBS domain Rrf2 PF02082.20 gi|73669658|ref|YP_305673.1| - 2.7e-08 34.1 0.1 9.9e-08 32.2 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulator HTH_11 PF08279.12 gi|73669658|ref|YP_305673.1| - 3.5e-07 30.1 0.1 8.1e-07 28.9 0.1 1.7 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 gi|73669658|ref|YP_305673.1| - 0.0062 16.4 0.0 0.073 13.0 0.0 2.7 4 0 0 4 4 4 1 MarR family Ribosomal_L9_C PF03948.14 gi|73669658|ref|YP_305673.1| - 0.064 13.7 0.5 0.13 12.7 0.1 1.7 2 0 0 2 2 2 0 Ribosomal protein L9, C-terminal domain TrmB PF01978.19 gi|73669658|ref|YP_305673.1| - 0.14 12.0 0.0 0.42 10.5 0.0 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB PRA-PH PF01503.17 gi|73669659|ref|YP_305674.1| - 5.1e-14 52.5 0.3 5.8e-14 52.3 0.3 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|73669659|ref|YP_305674.1| - 0.0038 17.4 1.2 0.0052 16.9 1.2 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain CLTH PF10607.9 gi|73669659|ref|YP_305674.1| - 0.012 15.5 0.7 0.036 14.0 0.2 1.8 1 1 1 2 2 2 0 CTLH/CRA C-terminal to LisH motif domain DUF383 PF04063.14 gi|73669659|ref|YP_305674.1| - 0.037 13.7 0.4 0.048 13.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF383) Aconitase PF00330.20 gi|73669660|ref|YP_305675.1| - 1.6e-92 311.0 0.3 1.5e-90 304.5 0.3 2.1 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|73669660|ref|YP_305675.1| - 0.12 11.0 0.0 0.19 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) CxxCxxCC PF03692.15 gi|73669661|ref|YP_305676.1| - 7.9e-12 45.7 5.7 2.6e-10 40.8 5.9 2.5 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain ACT PF01842.25 gi|73669662|ref|YP_305677.1| - 0.00072 19.3 0.1 0.002 17.9 0.1 1.8 1 0 0 1 1 1 1 ACT domain Transketolase_C PF02780.20 gi|73669662|ref|YP_305677.1| - 0.023 14.6 0.1 0.34 10.8 0.0 2.1 1 1 1 2 2 2 0 Transketolase, C-terminal domain NosD PF05048.13 gi|73669663|ref|YP_305678.1| - 9.2e-30 103.7 24.2 3e-29 102.0 24.2 1.9 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|73669663|ref|YP_305678.1| - 7.3e-17 61.0 3.1 2.5e-07 30.4 0.0 2.8 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.6 gi|73669663|ref|YP_305678.1| - 2.6e-11 43.6 23.6 2.6e-11 43.6 23.6 2.0 2 0 0 2 2 2 1 Right handed beta helix region Pectinesterase PF01095.19 gi|73669663|ref|YP_305678.1| - 0.0048 15.7 0.1 0.0083 14.9 0.1 1.3 1 0 0 1 1 1 1 Pectinesterase PKD_3 PF16820.5 gi|73669663|ref|YP_305678.1| - 0.019 14.7 0.0 2.2 8.1 0.0 2.4 2 0 0 2 2 2 0 PKD-like domain Y_Y_Y PF07495.13 gi|73669663|ref|YP_305678.1| - 0.021 14.8 1.6 6.1 6.9 0.0 3.0 3 0 0 3 3 3 0 Y_Y_Y domain Pectate_lyase_3 PF12708.7 gi|73669663|ref|YP_305678.1| - 0.43 10.4 21.0 0.36 10.7 17.0 2.7 1 1 1 2 2 2 0 Pectate lyase superfamily protein DUF4847 PF16139.5 gi|73669663|ref|YP_305678.1| - 0.55 10.1 9.1 22 5.0 0.0 3.5 3 1 1 4 4 4 0 Domain of unknown function (DUF4847) Cupin_2 PF07883.11 gi|73669664|ref|YP_305679.1| - 1.3e-16 60.1 0.2 3.5e-16 58.7 0.1 1.8 1 1 1 2 2 2 1 Cupin domain HTH_3 PF01381.22 gi|73669664|ref|YP_305679.1| - 9.7e-09 35.2 0.1 2.6e-08 33.8 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|73669664|ref|YP_305679.1| - 1.5e-08 34.5 0.0 2.9e-08 33.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|73669664|ref|YP_305679.1| - 6.1e-07 29.7 0.0 8.9e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain CENP-C_C PF11699.8 gi|73669664|ref|YP_305679.1| - 0.0016 18.6 0.1 0.0033 17.6 0.0 1.5 1 1 0 1 1 1 1 Mif2/CENP-C like Cupin_3 PF05899.12 gi|73669664|ref|YP_305679.1| - 0.0025 17.4 0.0 0.0046 16.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 gi|73669664|ref|YP_305679.1| - 0.016 15.1 0.0 0.026 14.4 0.0 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain DUF4437 PF14499.6 gi|73669664|ref|YP_305679.1| - 0.037 13.1 0.0 0.047 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4437) MannoseP_isomer PF01050.18 gi|73669664|ref|YP_305679.1| - 0.039 13.8 0.1 0.071 13.0 0.1 1.5 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase HTH_17 PF12728.7 gi|73669664|ref|YP_305679.1| - 0.11 12.7 0.0 0.57 10.4 0.0 2.2 2 1 0 2 2 2 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|73669664|ref|YP_305679.1| - 0.11 12.2 0.1 0.39 10.4 0.1 2.0 1 1 0 1 1 1 0 Sigma-70, region 4 AMP-binding PF00501.28 gi|73669665|ref|YP_305680.1| - 5.7e-69 232.7 0.0 7e-69 232.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|73669665|ref|YP_305680.1| - 2.3e-24 86.2 0.3 5.8e-24 84.9 0.3 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Fer4_7 PF12838.7 gi|73669666|ref|YP_305681.1| - 4.4e-10 40.0 9.0 6e-10 39.6 9.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73669666|ref|YP_305681.1| - 2.7e-08 33.8 20.9 5.6e-06 26.4 10.7 1.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73669666|ref|YP_305681.1| - 3.8e-08 33.3 5.2 6.5e-08 32.6 5.2 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73669666|ref|YP_305681.1| - 7.7e-08 32.0 11.5 8.3e-05 22.5 2.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|73669666|ref|YP_305681.1| - 2.5e-07 30.2 12.3 3.7e-06 26.5 1.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73669666|ref|YP_305681.1| - 1.6e-06 28.1 10.1 4.6e-06 26.6 10.4 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73669666|ref|YP_305681.1| - 5.9e-06 26.7 7.5 0.012 16.1 1.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73669666|ref|YP_305681.1| - 2.1e-05 25.4 11.5 0.0002 22.2 1.0 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|73669666|ref|YP_305681.1| - 2.4e-05 24.5 9.5 0.012 16.1 2.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|73669666|ref|YP_305681.1| - 5.3e-05 24.0 5.2 0.029 15.2 0.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73669666|ref|YP_305681.1| - 0.00014 21.7 11.4 0.0081 16.2 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73669666|ref|YP_305681.1| - 0.0013 19.2 11.3 0.12 12.9 2.9 2.2 1 1 1 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|73669666|ref|YP_305681.1| - 0.0083 16.5 13.7 0.15 12.5 3.4 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73669666|ref|YP_305681.1| - 0.016 16.1 17.6 0.056 14.4 5.8 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|73669666|ref|YP_305681.1| - 0.022 15.5 7.0 0.37 11.6 0.5 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|73669666|ref|YP_305681.1| - 0.032 14.4 6.0 0.3 11.3 1.1 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Pox_E10 PF04805.12 gi|73669666|ref|YP_305681.1| - 0.11 12.4 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 E10-like protein conserved region FeoB_associated PF12669.7 gi|73669666|ref|YP_305681.1| - 2.3 8.7 11.6 2.1 8.8 3.2 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein POR_N PF01855.19 gi|73669667|ref|YP_305682.1| - 8.7e-53 179.4 0.0 1.1e-52 179.1 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|73669667|ref|YP_305682.1| - 1.6e-27 95.7 0.0 2.9e-27 95.0 0.0 1.4 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|73669667|ref|YP_305682.1| - 4.1e-05 23.4 0.0 6.6e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|73669667|ref|YP_305682.1| - 0.00029 20.5 0.0 0.00042 20.0 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain POR PF01558.18 gi|73669668|ref|YP_305683.1| - 1.1e-36 126.6 0.3 2.1e-36 125.7 0.3 1.5 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|73669668|ref|YP_305683.1| - 1.1e-22 80.4 0.1 2.2e-22 79.5 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Orn_Arg_deC_N PF02784.16 gi|73669670|ref|YP_305685.1| - 1.7e-53 181.6 0.0 2.1e-53 181.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|73669670|ref|YP_305685.1| - 2.3e-09 37.3 0.0 2.8e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AA_permease_2 PF13520.6 gi|73669671|ref|YP_305686.1| - 8.3e-43 146.8 49.9 1e-42 146.5 49.9 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|73669671|ref|YP_305686.1| - 2.5e-27 95.6 47.2 5e-27 94.6 47.2 1.5 1 1 0 1 1 1 1 Amino acid permease DUF2684 PF10885.8 gi|73669671|ref|YP_305686.1| - 0.7 10.1 6.1 4.1 7.6 0.0 3.7 3 2 1 4 4 4 0 Protein of unknown function (DUF2684) Lactamase_B PF00753.27 gi|73669672|ref|YP_305687.1| - 7.1e-09 36.0 0.2 2.4e-08 34.3 0.2 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.25 gi|73669672|ref|YP_305687.1| - 0.00011 22.5 0.0 0.00023 21.4 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin Lactamase_B_3 PF13483.6 gi|73669672|ref|YP_305687.1| - 0.0075 16.2 0.0 0.038 13.9 0.0 1.9 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|73669672|ref|YP_305687.1| - 0.021 14.3 0.0 0.038 13.5 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Flavodoxin_5 PF12724.7 gi|73669672|ref|YP_305687.1| - 0.025 14.8 0.0 0.038 14.2 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain HHH PF00633.23 gi|73669672|ref|YP_305687.1| - 0.06 13.2 0.0 0.16 11.9 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif Gln-synt_C PF00120.24 gi|73669673|ref|YP_305688.1| - 3.3e-55 187.5 0.1 4.3e-54 183.8 0.1 2.0 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|73669673|ref|YP_305688.1| - 2.1e-12 46.6 0.0 4.3e-12 45.6 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain tRNA_deacylase PF04414.12 gi|73669674|ref|YP_305689.1| - 3.9e-69 232.3 0.0 4.8e-69 232.0 0.0 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase DUF3147 PF11345.8 gi|73669675|ref|YP_305690.1| - 2.7e-40 137.2 6.9 3e-40 137.0 6.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) CheR PF01739.18 gi|73669676|ref|YP_305691.1| - 3.9e-55 186.4 0.0 1.1e-54 184.9 0.0 1.8 2 0 0 2 2 1 1 CheR methyltransferase, SAM binding domain CheB_methylest PF01339.17 gi|73669676|ref|YP_305691.1| - 1e-51 175.0 0.0 1.9e-51 174.2 0.0 1.4 1 0 0 1 1 1 1 CheB methylesterase PAS_10 PF13596.6 gi|73669676|ref|YP_305691.1| - 2.4e-28 98.8 0.4 5.8e-26 91.2 0.0 3.9 4 0 0 4 4 3 1 PAS domain CheR_N PF03705.15 gi|73669676|ref|YP_305691.1| - 7.1e-15 54.5 0.5 2e-14 53.1 0.2 1.9 2 0 0 2 2 1 1 CheR methyltransferase, all-alpha domain PAS PF00989.25 gi|73669676|ref|YP_305691.1| - 3.7e-13 49.5 0.2 2.7e-11 43.5 0.1 3.4 3 0 0 3 3 3 1 PAS fold PAS_9 PF13426.7 gi|73669676|ref|YP_305691.1| - 1.1e-11 44.8 1.2 1.6e-06 28.3 0.0 3.1 3 0 0 3 3 2 2 PAS domain PAS_4 PF08448.10 gi|73669676|ref|YP_305691.1| - 5.1e-10 39.6 0.0 0.001 19.3 0.0 3.4 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.7 gi|73669676|ref|YP_305691.1| - 1.2e-05 25.2 0.0 5.9e-05 23.0 0.0 2.2 2 0 0 2 2 1 1 PAS domain PAS_3 PF08447.12 gi|73669676|ref|YP_305691.1| - 0.00012 22.3 0.0 0.00097 19.4 0.0 2.4 2 0 0 2 2 2 1 PAS fold CENP-F_leu_zip PF10473.9 gi|73669676|ref|YP_305691.1| - 0.00014 21.9 18.5 0.00035 20.6 18.5 1.6 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PAS_7 PF12860.7 gi|73669676|ref|YP_305691.1| - 0.00035 20.7 0.0 0.89 9.7 0.0 2.9 2 0 0 2 2 2 2 PAS fold Fez1 PF06818.15 gi|73669676|ref|YP_305691.1| - 0.0024 18.4 7.2 0.0049 17.4 7.2 1.4 1 0 0 1 1 1 1 Fez1 CorA PF01544.18 gi|73669676|ref|YP_305691.1| - 0.0063 15.9 4.0 0.0063 15.9 4.0 1.8 2 0 0 2 2 1 1 CorA-like Mg2+ transporter protein DUF16 PF01519.16 gi|73669676|ref|YP_305691.1| - 0.017 15.6 4.9 0.057 13.9 4.9 2.0 1 0 0 1 1 1 0 Protein of unknown function DUF16 Golgin_A5 PF09787.9 gi|73669676|ref|YP_305691.1| - 0.031 13.7 15.0 0.06 12.8 15.0 1.4 1 0 0 1 1 1 0 Golgin subfamily A member 5 MPS2 PF17060.5 gi|73669676|ref|YP_305691.1| - 0.041 13.1 5.2 0.07 12.4 5.2 1.2 1 0 0 1 1 1 0 Monopolar spindle protein 2 Methyltransf_12 PF08242.12 gi|73669676|ref|YP_305691.1| - 0.049 14.4 0.1 0.9 10.3 0.0 3.1 2 1 0 2 2 1 0 Methyltransferase domain Exonuc_VII_L PF02601.15 gi|73669676|ref|YP_305691.1| - 0.079 12.5 4.8 0.14 11.7 4.8 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Methyltransf_25 PF13649.6 gi|73669676|ref|YP_305691.1| - 0.08 13.7 0.0 8.6 7.1 0.0 3.2 1 1 0 1 1 1 0 Methyltransferase domain IFT57 PF10498.9 gi|73669676|ref|YP_305691.1| - 0.1 11.6 14.8 0.16 10.9 14.8 1.2 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 HMMR_N PF15905.5 gi|73669676|ref|YP_305691.1| - 0.1 12.0 17.2 0.19 11.1 17.2 1.3 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal OmpH PF03938.14 gi|73669676|ref|YP_305691.1| - 0.11 12.9 11.5 0.37 11.1 11.5 1.9 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Laminin_II PF06009.12 gi|73669676|ref|YP_305691.1| - 0.13 12.2 10.8 0.066 13.2 7.2 2.3 2 1 1 3 3 2 0 Laminin Domain II ATG16 PF08614.11 gi|73669676|ref|YP_305691.1| - 0.19 11.9 18.1 0.37 11.0 18.1 1.4 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) FapA PF03961.13 gi|73669676|ref|YP_305691.1| - 0.23 10.1 7.3 0.38 9.3 7.3 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A LMBR1 PF04791.16 gi|73669676|ref|YP_305691.1| - 0.23 10.3 1.0 0.36 9.7 1.0 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein UPF0449 PF15136.6 gi|73669676|ref|YP_305691.1| - 0.35 11.4 15.3 2.9 8.4 3.1 2.7 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 Fusion_gly PF00523.18 gi|73669676|ref|YP_305691.1| - 0.41 8.8 7.9 2 6.6 6.2 2.1 1 1 1 2 2 2 0 Fusion glycoprotein F0 DUF4349 PF14257.6 gi|73669676|ref|YP_305691.1| - 0.42 10.0 5.3 0.78 9.1 5.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) FAM76 PF16046.5 gi|73669676|ref|YP_305691.1| - 0.46 9.8 7.9 0.72 9.2 7.9 1.2 1 0 0 1 1 1 0 FAM76 protein UPF0242 PF06785.11 gi|73669676|ref|YP_305691.1| - 0.49 10.5 13.3 1.1 9.3 13.3 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Spc7 PF08317.11 gi|73669676|ref|YP_305691.1| - 0.54 9.1 22.8 0.35 9.7 20.9 1.6 2 0 0 2 2 1 0 Spc7 kinetochore protein DASH_Duo1 PF08651.10 gi|73669676|ref|YP_305691.1| - 0.57 10.0 13.1 0.19 11.6 5.4 2.6 1 1 1 2 2 2 0 DASH complex subunit Duo1 Rootletin PF15035.6 gi|73669676|ref|YP_305691.1| - 0.62 10.1 14.4 1.7 8.6 14.4 1.7 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion AAA_23 PF13476.6 gi|73669676|ref|YP_305691.1| - 0.62 10.5 9.8 1.9 8.9 9.8 1.8 1 0 0 1 1 1 0 AAA domain TPR_MLP1_2 PF07926.12 gi|73669676|ref|YP_305691.1| - 0.91 9.6 21.4 2.5 8.1 20.3 2.0 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein APG6_N PF17675.1 gi|73669676|ref|YP_305691.1| - 1.1 9.8 19.7 3.4 8.2 19.7 1.8 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF745 PF05335.13 gi|73669676|ref|YP_305691.1| - 1.1 8.9 12.4 2.4 7.8 12.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF745) DUF4407 PF14362.6 gi|73669676|ref|YP_305691.1| - 1.3 8.4 8.4 2.4 7.4 8.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1664 PF07889.12 gi|73669676|ref|YP_305691.1| - 1.4 9.0 9.3 2.6 8.1 3.9 3.1 2 1 1 3 3 2 0 Protein of unknown function (DUF1664) Seryl_tRNA_N PF02403.22 gi|73669676|ref|YP_305691.1| - 1.6 9.0 14.9 2.3 8.5 12.9 2.2 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Dzip-like_N PF13815.6 gi|73669676|ref|YP_305691.1| - 1.7 8.6 10.2 0.28 11.1 5.4 2.2 3 0 0 3 3 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal DUF3450 PF11932.8 gi|73669676|ref|YP_305691.1| - 1.9 7.8 10.0 3.8 6.7 10.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TMPIT PF07851.13 gi|73669676|ref|YP_305691.1| - 4.7 6.4 7.0 8 5.6 7.0 1.3 1 0 0 1 1 1 0 TMPIT-like protein Atg14 PF10186.9 gi|73669676|ref|YP_305691.1| - 4.7 6.2 10.1 8.3 5.4 10.1 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cnn_1N PF07989.11 gi|73669676|ref|YP_305691.1| - 5.4 7.2 18.6 15 5.8 2.0 3.4 1 1 2 3 3 3 0 Centrosomin N-terminal motif 1 KxDL PF10241.9 gi|73669676|ref|YP_305691.1| - 6.7 7.1 8.7 7.9 6.8 6.3 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein DUF724 PF05266.14 gi|73669676|ref|YP_305691.1| - 7.4 6.4 13.1 17 5.2 13.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF724) MEDS PF14417.6 gi|73669677|ref|YP_305692.1| - 1.9e-43 148.1 0.0 4e-43 147.0 0.0 1.6 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HisKA_2 PF07568.12 gi|73669677|ref|YP_305692.1| - 4.8e-30 103.5 3.6 4.8e-30 103.5 3.6 2.3 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.7 gi|73669677|ref|YP_305692.1| - 1e-21 77.1 0.4 4.5e-15 55.8 0.1 3.0 2 0 0 2 2 2 2 PAS domain PAS_3 PF08447.12 gi|73669677|ref|YP_305692.1| - 1.5e-19 70.1 0.1 4.4e-12 46.1 0.1 2.8 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 gi|73669677|ref|YP_305692.1| - 1e-15 57.7 0.0 1.7e-11 44.1 0.0 2.8 2 1 0 2 2 2 2 PAS fold PAS_4 PF08448.10 gi|73669677|ref|YP_305692.1| - 7.7e-11 42.2 0.0 5.7e-10 39.4 0.0 2.2 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.26 gi|73669677|ref|YP_305692.1| - 6e-07 29.9 1.1 7.2e-06 26.5 0.2 3.0 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|73669677|ref|YP_305692.1| - 1.3e-05 25.1 0.0 4.5e-05 23.4 0.0 2.0 1 0 0 1 1 1 1 PAS domain HWE_HK PF07536.14 gi|73669677|ref|YP_305692.1| - 6.4e-05 23.6 1.0 0.00016 22.3 1.0 1.6 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|73669677|ref|YP_305692.1| - 0.015 15.3 0.0 0.036 14.0 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain CLP1_P PF16575.5 gi|73669677|ref|YP_305692.1| - 0.063 13.1 0.1 5.1 6.9 0.0 2.8 2 1 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop SPOB_a PF14689.6 gi|73669677|ref|YP_305692.1| - 0.08 12.7 0.1 0.36 10.6 0.1 2.2 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain CelD_N PF02927.14 gi|73669677|ref|YP_305692.1| - 0.16 12.9 0.1 0.42 11.5 0.1 1.7 1 0 0 1 1 1 0 Cellulase N-terminal ig-like domain DUF3147 PF11345.8 gi|73669678|ref|YP_305693.1| - 7.4e-25 87.5 10.3 8.9e-25 87.2 10.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) Peptidase_U4 PF03419.13 gi|73669678|ref|YP_305693.1| - 0.0076 15.6 7.3 0.0086 15.4 7.3 1.1 1 0 0 1 1 1 1 Sporulation factor SpoIIGA YebO PF13974.6 gi|73669678|ref|YP_305693.1| - 0.18 11.9 0.1 0.29 11.2 0.1 1.6 1 0 0 1 1 1 0 YebO-like protein DUF997 PF06196.12 gi|73669678|ref|YP_305693.1| - 4.3 7.4 8.6 0.18 11.8 1.4 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF997) Desulfoferrod_N PF06397.12 gi|73669679|ref|YP_305694.1| - 0.00024 20.7 12.6 0.023 14.3 0.8 2.6 2 1 0 2 2 2 2 Desulfoferrodoxin, N-terminal domain 7TM_GPCR_Srbc PF10316.9 gi|73669679|ref|YP_305694.1| - 0.03 13.8 4.4 0.032 13.7 4.4 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srbc Zn_Tnp_IS91 PF14319.6 gi|73669679|ref|YP_305694.1| - 0.13 12.3 7.5 0.099 12.7 6.7 1.2 1 1 0 1 1 1 0 Transposase zinc-binding domain DUF89 PF01937.19 gi|73669680|ref|YP_305695.1| - 4.5e-56 190.3 0.1 5.6e-56 190.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 AAA_26 PF13500.6 gi|73669680|ref|YP_305695.1| - 0.11 12.4 0.1 0.24 11.2 0.1 1.6 1 0 0 1 1 1 0 AAA domain DUF5424 PF17462.2 gi|73669680|ref|YP_305695.1| - 0.29 11.1 2.5 7.5 6.5 0.3 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5424) CooT PF10133.9 gi|73669681|ref|YP_305696.1| - 2.1e-18 66.4 0.2 2.3e-18 66.2 0.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase accessory protein CooT YabP PF07873.11 gi|73669681|ref|YP_305696.1| - 0.013 15.3 0.1 0.016 15.0 0.1 1.2 1 0 0 1 1 1 0 YabP family Gp_dh_C PF02800.20 gi|73669682|ref|YP_305697.1| - 2.8e-27 95.3 0.0 4e-27 94.7 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|73669682|ref|YP_305697.1| - 1.4e-10 41.4 0.1 2.7e-10 40.4 0.1 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|73669682|ref|YP_305697.1| - 3.3e-07 30.6 0.3 2.6e-06 27.7 0.3 2.4 1 1 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|73669682|ref|YP_305697.1| - 0.00015 22.1 0.1 0.00038 20.7 0.1 1.7 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|73669682|ref|YP_305697.1| - 0.00045 19.6 0.1 0.018 14.4 0.1 2.2 1 1 1 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|73669682|ref|YP_305697.1| - 0.0022 18.2 0.3 0.0065 16.7 0.2 1.9 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_3 PF03447.16 gi|73669682|ref|YP_305697.1| - 0.0036 17.9 0.0 0.0085 16.7 0.0 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|73669682|ref|YP_305697.1| - 0.0042 17.9 0.1 0.009 16.8 0.1 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Semialdhyde_dh PF01118.24 gi|73669682|ref|YP_305697.1| - 0.011 16.1 0.1 0.04 14.4 0.0 1.9 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain IlvN PF07991.12 gi|73669682|ref|YP_305697.1| - 0.074 12.6 1.8 0.63 9.6 0.6 2.5 2 1 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain PglD_N PF17836.1 gi|73669682|ref|YP_305697.1| - 0.11 13.1 0.1 0.24 12.1 0.1 1.6 1 0 0 1 1 1 0 PglD N-terminal domain Inositol_P PF00459.25 gi|73669683|ref|YP_305698.1| - 1.6e-35 123.0 0.0 1.8e-35 122.8 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|73669683|ref|YP_305698.1| - 2.3e-07 30.5 0.0 3.8e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain FBPase_glpX PF03320.13 gi|73669683|ref|YP_305698.1| - 0.051 12.4 0.0 0.082 11.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NAD_kinase PF01513.21 gi|73669684|ref|YP_305699.1| - 2.9e-60 204.0 0.3 3.4e-60 203.7 0.3 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|73669684|ref|YP_305699.1| - 6.8e-05 22.5 0.0 0.00011 21.8 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain PK_C PF02887.16 gi|73669684|ref|YP_305699.1| - 0.085 13.1 0.1 22 5.3 0.0 3.0 3 1 0 3 3 3 0 Pyruvate kinase, alpha/beta domain HMGL-like PF00682.19 gi|73669685|ref|YP_305700.1| - 4.8e-80 268.9 4.0 7.9e-80 268.2 4.0 1.3 1 0 0 1 1 1 1 HMGL-like Phage_TAC_12 PF12363.8 gi|73669685|ref|YP_305700.1| - 0.071 13.5 0.2 0.39 11.1 0.1 2.3 2 0 0 2 2 2 0 Phage tail assembly chaperone protein, TAC Lipase_GDSL_2 PF13472.6 gi|73669685|ref|YP_305700.1| - 0.2 12.0 0.0 0.79 10.1 0.0 2.0 3 0 0 3 3 3 0 GDSL-like Lipase/Acylhydrolase family VCBS PF13517.6 gi|73669686|ref|YP_305701.1| - 0.23 12.1 2.5 0.58 10.8 0.9 2.5 2 1 0 2 2 2 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella DUF3160 PF11369.8 gi|73669687|ref|YP_305702.1| - 1.9e-230 766.7 2.5 2.2e-230 766.4 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) DUF3160 PF11369.8 gi|73669688|ref|YP_305703.1| - 7.6e-245 814.2 6.4 9.1e-245 813.9 6.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) FtsH_ext PF06480.15 gi|73669688|ref|YP_305703.1| - 0.022 15.1 0.1 0.06 13.7 0.1 1.8 1 0 0 1 1 1 0 FtsH Extracellular DUF3160 PF11369.8 gi|73669689|ref|YP_305704.1| - 2.9e-231 769.3 8.6 3.4e-231 769.1 8.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) Disaggr_assoc PF08480.10 gi|73669690|ref|YP_305705.1| - 4.3e-75 251.7 13.7 4.3e-75 251.7 13.7 2.4 2 1 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.6 gi|73669690|ref|YP_305705.1| - 2.8e-12 46.8 22.5 2.8e-12 46.8 22.5 4.5 3 1 2 5 5 5 2 Right handed beta helix region PGF-CTERM PF18204.1 gi|73669690|ref|YP_305705.1| - 0.0025 17.7 0.1 0.0025 17.7 0.1 1.7 2 0 0 2 2 2 1 PGF-CTERM motif ComJ PF11033.8 gi|73669690|ref|YP_305705.1| - 0.084 12.6 0.1 0.2 11.3 0.1 1.6 1 0 0 1 1 1 0 Competence protein J (ComJ) Gamma-thionin PF00304.20 gi|73669690|ref|YP_305705.1| - 0.2 11.9 0.4 0.64 10.3 0.0 2.0 2 0 0 2 2 2 0 Gamma-thionin family DUF1036 PF06282.11 gi|73669693|ref|YP_305708.1| - 2.1e-09 37.9 0.5 2.9e-09 37.4 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1036) DUF4309 PF14172.6 gi|73669694|ref|YP_305709.1| - 0.019 15.0 0.2 0.022 14.8 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) AAA_3 PF07726.11 gi|73669695|ref|YP_305710.1| - 3.1e-64 214.7 0.1 5e-64 214.0 0.1 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|73669695|ref|YP_305710.1| - 9.2e-20 70.3 0.1 1.7e-19 69.4 0.1 1.4 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|73669695|ref|YP_305710.1| - 6.8e-13 48.8 0.0 1.4e-12 47.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|73669695|ref|YP_305710.1| - 1.5e-05 24.8 0.0 0.00019 21.2 0.0 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 gi|73669695|ref|YP_305710.1| - 1.8e-05 24.5 0.0 0.00011 21.9 0.0 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|73669695|ref|YP_305710.1| - 3.6e-05 23.2 0.2 0.0031 16.9 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI MCM PF00493.23 gi|73669695|ref|YP_305710.1| - 0.00031 19.9 0.0 0.0011 18.1 0.0 2.0 1 1 0 1 1 1 1 MCM P-loop domain AAA PF00004.29 gi|73669695|ref|YP_305710.1| - 0.00064 20.2 0.0 0.002 18.5 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF58 PF01882.18 gi|73669696|ref|YP_305711.1| - 2.1e-23 82.4 0.0 4.6e-23 81.3 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|73669696|ref|YP_305711.1| - 1.6e-10 41.6 0.1 4.4e-10 40.1 0.1 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|73669696|ref|YP_305711.1| - 0.062 12.7 0.0 0.14 11.6 0.0 1.6 1 1 0 1 1 1 0 VWA domain containing CoxE-like protein VWA PF00092.28 gi|73669697|ref|YP_305712.1| - 2.2e-26 93.2 0.2 3e-26 92.7 0.2 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|73669697|ref|YP_305712.1| - 5.9e-21 75.1 0.0 1.6e-20 73.7 0.0 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain BatA PF07584.11 gi|73669697|ref|YP_305712.1| - 1.2e-12 48.0 0.0 4e-11 43.1 0.0 2.2 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal DUF1194 PF06707.11 gi|73669697|ref|YP_305712.1| - 2.1e-05 23.9 0.2 0.0059 15.8 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF1194) VWA_3 PF13768.6 gi|73669697|ref|YP_305712.1| - 0.00036 20.5 0.0 0.0041 17.1 0.0 2.3 2 1 1 3 3 3 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|73669697|ref|YP_305712.1| - 0.00069 19.1 0.0 0.0021 17.5 0.0 1.7 1 1 0 1 1 1 1 VWA domain containing CoxE-like protein Ssl1 PF04056.14 gi|73669697|ref|YP_305712.1| - 0.009 15.8 0.0 0.055 13.3 0.0 1.9 2 0 0 2 2 2 1 Ssl1-like DUF3892 PF13031.6 gi|73669697|ref|YP_305712.1| - 0.052 14.2 0.1 0.8 10.4 0.0 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3892) SPOC PF07744.13 gi|73669697|ref|YP_305712.1| - 0.1 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 SPOC domain Hamartin PF04388.12 gi|73669698|ref|YP_305713.1| - 0.46 9.1 28.2 0.56 8.8 28.2 1.1 1 0 0 1 1 1 0 Hamartin protein BTRD1 PF17660.1 gi|73669698|ref|YP_305713.1| - 0.48 10.3 0.0 0.48 10.3 0.0 2.7 2 1 1 3 3 3 0 Bacterial tandem repeat domain 1 DDE_Tnp_1 PF01609.21 gi|73669699|ref|YP_305714.1| - 6.4e-23 81.5 0.1 6.4e-23 81.5 0.1 1.8 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_2 PF04693.12 gi|73669699|ref|YP_305714.1| - 0.0012 18.1 0.6 0.0021 17.4 0.6 1.4 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 Ku_N PF03731.15 gi|73669700|ref|YP_305715.1| - 0.047 13.4 0.7 0.079 12.7 0.0 1.6 2 0 0 2 2 2 0 Ku70/Ku80 N-terminal alpha/beta domain Eco57I PF07669.11 gi|73669701|ref|YP_305716.1| - 3.2e-17 62.9 2.7 4e-16 59.4 0.3 3.3 3 0 0 3 3 3 1 Eco57I restriction-modification methylase N6_Mtase PF02384.16 gi|73669701|ref|YP_305716.1| - 6.8e-13 48.6 1.5 5.4e-07 29.2 0.7 2.8 2 1 0 2 2 2 2 N-6 DNA Methylase TaqI_C PF12950.7 gi|73669701|ref|YP_305716.1| - 2.8e-05 24.2 6.5 5.6e-05 23.2 0.7 3.7 3 0 0 3 3 3 1 TaqI-like C-terminal specificity domain MTS PF05175.14 gi|73669701|ref|YP_305716.1| - 0.057 13.0 0.1 12 5.4 0.1 3.5 4 0 0 4 4 4 0 Methyltransferase small domain HSDR_N PF04313.14 gi|73669702|ref|YP_305717.1| - 1.3e-06 28.5 0.0 0.035 14.0 0.0 2.1 1 1 1 2 2 2 2 Type I restriction enzyme R protein N terminus (HSDR_N) HSDR_N_2 PF13588.6 gi|73669702|ref|YP_305717.1| - 0.00082 19.3 0.0 0.0016 18.4 0.0 1.5 1 0 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) YdjM PF04307.14 gi|73669703|ref|YP_305718.1| - 6.1e-09 35.4 1.2 2e-08 33.8 1.2 1.7 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Zn_dep_PLPC PF00882.18 gi|73669703|ref|YP_305718.1| - 0.021 14.8 0.0 0.031 14.3 0.0 1.1 1 0 0 1 1 1 0 Zinc dependent phospholipase C DUF4184 PF13803.6 gi|73669703|ref|YP_305718.1| - 0.042 13.6 0.7 0.73 9.5 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4184) MscS_TM PF12794.7 gi|73669703|ref|YP_305718.1| - 0.12 11.3 0.0 0.13 11.1 0.0 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Radical_SAM PF04055.21 gi|73669704|ref|YP_305719.1| - 2.1e-22 80.3 0.0 4.7e-22 79.1 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73669704|ref|YP_305719.1| - 2.5e-11 44.0 0.0 4.9e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73669704|ref|YP_305719.1| - 2.1e-08 34.3 0.0 7.1e-08 32.6 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|73669704|ref|YP_305719.1| - 6.5e-08 33.0 1.8 6.5e-08 33.0 1.8 2.1 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain HMGL-like PF00682.19 gi|73669704|ref|YP_305719.1| - 0.0085 15.7 0.0 0.019 14.6 0.0 1.5 1 1 0 1 1 1 1 HMGL-like TM2 PF05154.16 gi|73669704|ref|YP_305719.1| - 0.032 14.6 0.0 0.062 13.6 0.0 1.4 1 0 0 1 1 1 0 TM2 domain Lipase_2 PF01674.18 gi|73669704|ref|YP_305719.1| - 0.15 11.6 0.0 6.6 6.2 0.0 2.2 2 0 0 2 2 2 0 Lipase (class 2) POR_N PF01855.19 gi|73669705|ref|YP_305720.1| - 3e-56 190.7 0.0 5e-56 190.0 0.0 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|73669705|ref|YP_305720.1| - 5.3e-40 137.4 0.1 1.4e-39 136.0 0.1 1.7 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_N PF02776.18 gi|73669705|ref|YP_305720.1| - 3.6e-06 26.7 0.1 7.8e-06 25.6 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PFOR_II PF17147.4 gi|73669705|ref|YP_305720.1| - 0.0031 17.8 0.0 0.0094 16.2 0.0 1.9 2 0 0 2 2 2 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_C PF02775.21 gi|73669706|ref|YP_305721.1| - 4.7e-29 101.2 0.0 6.4e-29 100.7 0.0 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|73669706|ref|YP_305721.1| - 2.2e-28 98.2 0.6 4e-28 97.3 0.3 1.6 2 0 0 2 2 2 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal LPG_synthase_TM PF03706.13 gi|73669707|ref|YP_305722.1| - 1.6e-41 142.8 28.1 1.9e-41 142.6 28.1 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region AI-2E_transport PF01594.16 gi|73669708|ref|YP_305723.1| - 2.6e-44 151.7 37.2 2.9e-44 151.6 37.2 1.0 1 0 0 1 1 1 1 AI-2E family transporter UPF0228 PF05727.11 gi|73669709|ref|YP_305724.1| - 9.5e-43 144.9 9.2 1.6e-42 144.2 8.8 1.5 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0228) Big_8 PF17961.1 gi|73669709|ref|YP_305724.1| - 0.037 14.2 2.2 0.098 12.8 0.2 2.2 1 1 1 2 2 2 0 Bacterial Ig domain MRP-63 PF14978.6 gi|73669709|ref|YP_305724.1| - 0.048 14.3 0.1 0.096 13.3 0.1 1.6 1 0 0 1 1 1 0 Mitochondrial ribosome protein 63 YHS PF04945.13 gi|73669710|ref|YP_305725.1| - 1.4e-19 69.9 5.6 1.8e-19 69.6 5.6 1.1 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.14 gi|73669710|ref|YP_305725.1| - 0.003 17.5 2.0 0.0044 16.9 2.0 1.4 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif Arc_trans_TRASH PF08394.10 gi|73669710|ref|YP_305725.1| - 0.0037 17.6 0.4 0.0057 17.0 0.4 1.4 1 0 0 1 1 1 1 Archaeal TRASH domain DUF3330 PF11809.8 gi|73669710|ref|YP_305725.1| - 0.042 13.9 0.1 0.048 13.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3330) DUF2116 PF09889.9 gi|73669710|ref|YP_305725.1| - 0.26 11.3 1.4 0.31 11.1 0.4 1.6 1 1 1 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) 2-Hacid_dh_C PF02826.19 gi|73669711|ref|YP_305726.1| - 1.2e-66 223.5 0.1 1.6e-66 223.1 0.1 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|73669711|ref|YP_305726.1| - 1.9e-24 85.8 0.0 2.2e-24 85.6 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|73669711|ref|YP_305726.1| - 5.1e-05 23.5 0.6 0.0001 22.5 0.6 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|73669711|ref|YP_305726.1| - 0.00018 22.0 0.8 0.00094 19.7 0.2 2.3 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 gi|73669711|ref|YP_305726.1| - 0.00026 20.6 0.4 0.00078 19.1 0.2 1.8 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain ADH_zinc_N PF00107.26 gi|73669711|ref|YP_305726.1| - 0.0087 16.0 0.1 0.24 11.4 0.0 2.5 2 1 0 2 2 2 1 Zinc-binding dehydrogenase AdoHcyase_NAD PF00670.21 gi|73669711|ref|YP_305726.1| - 0.012 15.7 0.5 0.066 13.3 0.4 1.9 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Shikimate_DH PF01488.20 gi|73669711|ref|YP_305726.1| - 0.021 14.9 0.3 0.058 13.5 0.1 1.8 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|73669711|ref|YP_305726.1| - 0.036 13.4 1.2 0.11 11.7 0.9 1.9 2 1 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Voltage_CLC PF00654.20 gi|73669712|ref|YP_305727.1| - 1.5e-82 277.7 40.7 3.3e-81 273.3 32.7 2.1 1 1 1 2 2 2 2 Voltage gated chloride channel CBS PF00571.28 gi|73669712|ref|YP_305727.1| - 2.2e-24 85.7 1.5 9.5e-13 48.4 0.1 2.6 2 0 0 2 2 2 2 CBS domain Rick_17kDa_Anti PF05433.15 gi|73669712|ref|YP_305727.1| - 0.61 10.0 12.3 0.06 13.2 4.3 2.9 2 0 0 2 2 2 0 Glycine zipper 2TM domain Metalloenzyme PF01676.18 gi|73669713|ref|YP_305728.1| - 4.6e-82 275.1 0.0 5.3e-82 274.9 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily iPGM_N PF06415.13 gi|73669713|ref|YP_305728.1| - 3.2e-81 271.9 0.1 6.5e-81 270.9 0.1 1.5 1 1 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Phosphodiest PF01663.22 gi|73669713|ref|YP_305728.1| - 2.5e-06 27.3 0.3 5.1e-06 26.3 0.0 1.7 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|73669713|ref|YP_305728.1| - 0.0024 17.4 0.0 0.0057 16.1 0.0 1.7 2 0 0 2 2 2 1 Sulfatase PglZ PF08665.12 gi|73669713|ref|YP_305728.1| - 0.0025 17.9 0.1 0.0062 16.6 0.1 1.6 1 0 0 1 1 1 1 PglZ domain Alk_phosphatase PF00245.20 gi|73669713|ref|YP_305728.1| - 0.019 13.9 0.1 0.029 13.3 0.1 1.2 1 0 0 1 1 1 0 Alkaline phosphatase Methyltransf_31 PF13847.6 gi|73669713|ref|YP_305728.1| - 0.041 13.7 0.0 0.077 12.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PPDK_N PF01326.19 gi|73669714|ref|YP_305729.1| - 2.7e-113 378.6 0.0 4e-113 378.0 0.0 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|73669714|ref|YP_305729.1| - 2.1e-61 207.6 0.0 3.4e-61 206.9 0.0 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|73669714|ref|YP_305729.1| - 3.3e-25 87.6 0.7 8.1e-25 86.3 0.7 1.7 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain DRE2_N PF16803.5 gi|73669714|ref|YP_305729.1| - 0.023 15.0 0.0 0.064 13.5 0.0 1.7 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus DeoC PF01791.9 gi|73669715|ref|YP_305730.1| - 1.3e-51 175.5 0.1 1.6e-51 175.2 0.1 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PGM_PMM_I PF02878.16 gi|73669716|ref|YP_305731.1| - 1.4e-41 141.4 0.2 5.2e-41 139.6 0.1 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|73669716|ref|YP_305731.1| - 4e-26 91.6 0.0 9.4e-26 90.4 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|73669716|ref|YP_305731.1| - 1e-25 90.1 0.0 2e-25 89.2 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|73669716|ref|YP_305731.1| - 1.6e-12 47.4 0.0 5e-12 45.8 0.0 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF2196 PF09962.9 gi|73669717|ref|YP_305732.1| - 4.5e-30 103.4 5.8 5e-30 103.3 5.8 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) DUF86 PF01934.17 gi|73669718|ref|YP_305733.1| - 9e-06 25.5 0.8 0.061 13.2 0.1 2.6 2 1 1 3 3 3 2 Protein of unknown function DUF86 DUF4145 PF13643.6 gi|73669718|ref|YP_305733.1| - 3.9e-05 23.7 1.5 0.00095 19.2 0.0 2.4 2 1 0 2 2 2 1 Domain of unknown function (DUF4145) Trehalose_recp PF06151.13 gi|73669718|ref|YP_305733.1| - 0.023 13.3 0.1 0.038 12.6 0.1 1.3 1 0 0 1 1 1 0 Trehalose receptor HEPN_Apea PF18739.1 gi|73669718|ref|YP_305733.1| - 0.025 15.0 7.5 0.025 15.0 2.6 2.7 1 1 1 2 2 2 0 Apea-like HEPN DUF1761 PF08570.10 gi|73669720|ref|YP_305735.1| - 7.7 6.8 18.5 2.9 8.2 0.6 3.2 1 1 3 4 4 4 0 Protein of unknown function (DUF1761) DUF2124 PF09897.9 gi|73669722|ref|YP_305737.1| - 2.1e-48 163.8 0.1 2.4e-48 163.6 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) DJ-1_PfpI PF01965.24 gi|73669722|ref|YP_305737.1| - 0.14 11.9 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family MCH PF02289.16 gi|73669723|ref|YP_305738.1| - 9.9e-132 438.9 0.0 1.1e-131 438.8 0.0 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) Peptidase_U32 PF01136.19 gi|73669724|ref|YP_305739.1| - 4.6e-84 281.2 0.0 6.3e-84 280.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family U32 GTP_EFTU_D2 PF03144.25 gi|73669724|ref|YP_305739.1| - 0.019 15.3 0.8 0.091 13.2 0.8 2.0 1 1 0 1 1 1 0 Elongation factor Tu domain 2 DUF1604 PF07713.13 gi|73669724|ref|YP_305739.1| - 0.047 13.5 0.1 0.12 12.2 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) GTP_EFTU_D4 PF14578.6 gi|73669724|ref|YP_305739.1| - 0.073 13.0 0.8 0.63 10.0 0.1 2.5 1 1 1 2 2 2 0 Elongation factor Tu domain 4 Acyl_transf_3 PF01757.22 gi|73669725|ref|YP_305740.1| - 1.4e-15 57.3 50.1 2.1e-15 56.6 50.1 1.3 1 0 0 1 1 1 1 Acyltransferase family OpgC_C PF10129.9 gi|73669725|ref|YP_305740.1| - 0.22 10.4 31.5 0.39 9.5 31.5 1.5 1 1 0 1 1 1 0 OpgC protein DUF4428 PF14471.6 gi|73669726|ref|YP_305741.1| - 0.28 11.1 2.5 0.66 9.9 2.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) Phenyl_P_gamma PF09662.10 gi|73669727|ref|YP_305742.1| - 0.15 12.3 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma) PRA-PH PF01503.17 gi|73669728|ref|YP_305743.1| - 0.017 15.5 0.0 0.023 15.1 0.0 1.1 1 0 0 1 1 1 0 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|73669728|ref|YP_305743.1| - 0.041 14.1 0.1 0.067 13.4 0.1 1.3 1 0 0 1 1 1 0 MazG nucleotide pyrophosphohydrolase domain Inovirus_Gp2 PF11726.8 gi|73669729|ref|YP_305744.1| - 0.067 13.1 0.6 1.1 9.2 0.1 2.6 2 0 0 2 2 2 0 Inovirus Gp2 TrbC PF04956.13 gi|73669730|ref|YP_305745.1| - 0.032 14.4 3.0 0.044 14.0 3.0 1.2 1 0 0 1 1 1 0 TrbC/VIRB2 family CarboxypepD_reg PF13620.6 gi|73669731|ref|YP_305746.1| - 5.6e-20 71.4 15.2 5.5e-09 36.2 1.0 3.7 3 0 0 3 3 3 3 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|73669731|ref|YP_305746.1| - 6.4e-16 58.1 7.8 1.8e-08 34.3 0.1 2.9 3 0 0 3 3 3 2 CarboxypepD_reg-like domain Big_6 PF17936.1 gi|73669731|ref|YP_305746.1| - 0.00094 19.4 2.6 0.2 11.9 0.1 3.6 3 0 0 3 3 3 1 Bacterial Ig domain phage_tail_N PF08400.10 gi|73669731|ref|YP_305746.1| - 0.0023 17.9 0.1 0.006 16.6 0.1 1.7 1 0 0 1 1 1 1 Prophage tail fibre N-terminal PEGA PF08308.11 gi|73669731|ref|YP_305746.1| - 0.028 14.3 0.2 1.1 9.2 0.0 2.9 2 0 0 2 2 2 0 PEGA domain MG2 PF01835.19 gi|73669731|ref|YP_305746.1| - 0.063 13.7 2.1 48 4.5 0.0 4.7 5 0 0 5 5 5 0 MG2 domain bMG3 PF11974.8 gi|73669731|ref|YP_305746.1| - 0.11 12.5 0.1 0.71 9.9 0.0 2.3 2 0 0 2 2 2 0 Bacterial alpha-2-macroglobulin MG3 domain DUF3244 PF11589.8 gi|73669731|ref|YP_305746.1| - 0.69 10.0 3.6 8.8 6.5 0.0 3.7 3 1 0 4 4 4 0 Domain of unknown function (DUF3244) KASH PF10541.9 gi|73669732|ref|YP_305747.1| - 0.23 11.8 1.3 2.2 8.6 0.7 2.4 2 0 0 2 2 2 0 Nuclear envelope localisation domain AAA PF00004.29 gi|73669736|ref|YP_305751.1| - 0.00068 20.1 0.0 0.0097 16.3 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|73669736|ref|YP_305751.1| - 0.0065 16.4 0.0 0.1 12.5 0.0 2.1 2 0 0 2 2 2 1 NACHT domain Phage_integrase PF00589.22 gi|73669737|ref|YP_305752.1| - 7.7e-23 81.1 0.0 1.1e-22 80.6 0.0 1.2 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 gi|73669737|ref|YP_305752.1| - 7.5e-13 48.6 1.3 9.6e-08 32.2 0.1 2.5 1 1 1 2 2 2 2 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 gi|73669737|ref|YP_305752.1| - 2.5e-12 47.1 0.1 9.3e-12 45.3 0.1 2.1 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Pox_VLTF3 PF04947.14 gi|73669737|ref|YP_305752.1| - 0.0033 17.2 0.0 0.073 12.8 0.0 2.4 2 0 0 2 2 2 1 Poxvirus Late Transcription Factor VLTF3 like Phage_int_SAM_5 PF13102.6 gi|73669737|ref|YP_305752.1| - 0.017 15.5 0.2 0.076 13.4 0.1 2.2 1 1 0 1 1 1 0 Phage integrase SAM-like domain TAN PF11640.8 gi|73669737|ref|YP_305752.1| - 0.11 12.6 0.1 0.34 11.0 0.0 1.8 2 0 0 2 2 2 0 Telomere-length maintenance and DNA damage repair PDDEXK_4 PF14281.6 gi|73669738|ref|YP_305753.1| - 0.0053 16.9 0.2 0.017 15.3 0.1 1.9 1 1 0 2 2 2 1 PD-(D/E)XK nuclease superfamily HTH_19 PF12844.7 gi|73669738|ref|YP_305753.1| - 0.027 14.5 0.7 0.09 12.8 0.7 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain FKBP_C PF00254.28 gi|73669739|ref|YP_305754.1| - 1.1e-12 48.0 0.3 2.5e-09 37.3 0.1 2.7 2 1 0 2 2 2 2 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP26_C PF18046.1 gi|73669739|ref|YP_305754.1| - 2.3e-05 24.4 0.0 4.4e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 FKBP26_C-terminal NESP55 PF06390.12 gi|73669739|ref|YP_305754.1| - 1.3 8.6 8.6 1.9 8.0 8.6 1.2 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) Trypan_PARP PF05887.11 gi|73669739|ref|YP_305754.1| - 2.6 8.0 12.3 4.1 7.4 12.3 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) NikR_C PF08753.11 gi|73669740|ref|YP_305755.1| - 1.1e-27 96.0 0.5 1.6e-27 95.4 0.5 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|73669740|ref|YP_305755.1| - 1.9e-05 24.4 0.0 3.9e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|73669740|ref|YP_305755.1| - 0.018 15.2 0.0 0.023 14.9 0.0 1.2 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family IL11 PF07400.11 gi|73669740|ref|YP_305755.1| - 0.13 11.9 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 Interleukin 11 Acetyltransf_1 PF00583.25 gi|73669741|ref|YP_305756.1| - 1.2e-16 61.0 0.1 1.8e-16 60.4 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|73669741|ref|YP_305756.1| - 3.3e-12 46.5 0.1 6.4e-12 45.5 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73669741|ref|YP_305756.1| - 9.1e-11 41.6 0.0 1.6e-10 40.8 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 gi|73669741|ref|YP_305756.1| - 2.3e-10 40.7 0.1 3.8e-10 40.0 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73669741|ref|YP_305756.1| - 1.6e-07 31.5 0.1 2.3e-07 31.0 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|73669741|ref|YP_305756.1| - 3.8e-07 30.4 0.7 6.4e-07 29.6 0.7 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|73669741|ref|YP_305756.1| - 2.4e-05 23.9 2.8 3.7e-05 23.3 2.8 1.5 1 1 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_3 PF13302.7 gi|73669741|ref|YP_305756.1| - 0.00026 21.7 0.0 0.00038 21.1 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|73669741|ref|YP_305756.1| - 0.00093 18.9 0.0 0.0015 18.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|73669741|ref|YP_305756.1| - 0.0083 15.7 0.0 0.01 15.5 0.0 1.2 1 0 0 1 1 1 1 GNAT acetyltransferase Nudix_hydro PF18290.1 gi|73669741|ref|YP_305756.1| - 0.031 14.2 0.0 0.073 13.1 0.0 1.6 1 0 0 1 1 1 0 Nudix hydrolase domain SSP160 PF06933.11 gi|73669741|ref|YP_305756.1| - 0.39 8.9 0.4 0.49 8.5 0.4 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Acetyltransf_1 PF00583.25 gi|73669742|ref|YP_305757.1| - 2.3e-16 60.1 0.0 3.3e-16 59.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 gi|73669742|ref|YP_305757.1| - 3.1e-13 49.5 0.0 5.1e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 gi|73669742|ref|YP_305757.1| - 2.8e-11 43.5 0.0 4.2e-11 42.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73669742|ref|YP_305757.1| - 3e-11 43.6 0.0 5.1e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73669742|ref|YP_305757.1| - 3.5e-09 36.8 0.0 4.8e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|73669742|ref|YP_305757.1| - 9.4e-08 32.3 0.2 1.2e-07 32.0 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|73669742|ref|YP_305757.1| - 3.1e-05 23.6 0.9 4.3e-05 23.1 0.9 1.2 1 0 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_3 PF13302.7 gi|73669742|ref|YP_305757.1| - 0.00022 21.9 0.0 0.00028 21.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|73669742|ref|YP_305757.1| - 0.0027 17.4 0.0 0.0041 16.8 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|73669742|ref|YP_305757.1| - 0.012 15.2 0.0 0.019 14.5 0.0 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_CG PF14542.6 gi|73669742|ref|YP_305757.1| - 0.021 15.0 0.0 0.036 14.2 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Na_Ca_ex PF01699.24 gi|73669743|ref|YP_305758.1| - 1.7e-51 174.2 42.7 6.2e-26 91.2 18.1 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein UCR_UQCRX_QCR9 PF05365.12 gi|73669744|ref|YP_305759.1| - 0.0059 16.5 22.1 1.8e+04 -9.7 22.1 4.6 1 1 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like BLM10_mid PF16507.5 gi|73669744|ref|YP_305759.1| - 0.085 11.5 5.1 1.7 7.2 5.1 2.1 1 1 0 1 1 1 0 Proteasome-substrate-size regulator, mid region PLN_propep PF16485.5 gi|73669744|ref|YP_305759.1| - 4.3 7.1 13.6 8e+02 -0.1 0.1 5.2 1 1 1 2 2 2 0 Protealysin propeptide TPR_1 PF00515.28 gi|73669745|ref|YP_305760.1| - 6.4e-32 108.1 2.3 6.1e-10 38.5 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73669745|ref|YP_305760.1| - 1.6e-25 88.5 0.1 4.6e-07 29.4 0.0 4.2 1 1 3 4 4 4 4 TPR repeat TPR_8 PF13181.6 gi|73669745|ref|YP_305760.1| - 1.6e-25 87.1 2.2 1.1e-08 34.6 0.1 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73669745|ref|YP_305760.1| - 1.8e-25 87.0 0.7 2.4e-08 33.5 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73669745|ref|YP_305760.1| - 8.9e-20 69.6 3.3 0.0004 20.6 0.0 4.7 5 0 0 5 5 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73669745|ref|YP_305760.1| - 1.3e-18 66.1 0.1 3.2e-05 24.4 0.0 4.6 1 1 4 5 5 5 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73669745|ref|YP_305760.1| - 1e-11 44.0 0.1 0.0025 17.7 0.0 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73669745|ref|YP_305760.1| - 2.1e-11 43.8 0.0 5.6e-06 26.4 0.0 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73669745|ref|YP_305760.1| - 3e-11 43.8 0.0 2.2e-05 25.0 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73669745|ref|YP_305760.1| - 5e-11 42.9 0.1 2.5e-06 27.9 0.0 3.5 1 1 1 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73669745|ref|YP_305760.1| - 3.2e-10 40.1 0.5 8.4e-05 22.8 0.0 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73669745|ref|YP_305760.1| - 8.3e-08 32.4 0.2 0.3 11.8 0.0 4.0 4 0 0 4 4 4 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|73669745|ref|YP_305760.1| - 1.3e-07 31.6 0.5 0.28 11.3 0.0 4.1 3 1 1 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|73669745|ref|YP_305760.1| - 7.3e-07 28.9 0.1 0.25 11.2 0.0 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|73669745|ref|YP_305760.1| - 9.2e-07 28.1 2.4 0.012 14.6 1.8 2.4 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 DUF3856 PF12968.7 gi|73669745|ref|YP_305760.1| - 3.4e-06 27.2 0.1 0.081 13.0 0.0 3.2 1 1 1 2 2 2 2 Domain of Unknown Function (DUF3856) ANAPC3 PF12895.7 gi|73669745|ref|YP_305760.1| - 5.6e-06 26.5 1.0 0.0057 16.8 0.2 2.3 1 1 2 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 MIT PF04212.18 gi|73669745|ref|YP_305760.1| - 2e-05 24.6 6.1 0.11 12.6 0.0 3.7 4 0 0 4 4 4 2 MIT (microtubule interacting and transport) domain BTAD PF03704.17 gi|73669745|ref|YP_305760.1| - 4e-05 24.1 0.1 0.01 16.3 0.1 2.2 2 0 0 2 2 2 1 Bacterial transcriptional activator domain TPR_15 PF13429.6 gi|73669745|ref|YP_305760.1| - 0.00018 20.8 0.0 0.26 10.4 0.0 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_5 PF12688.7 gi|73669745|ref|YP_305760.1| - 0.016 15.5 0.1 12 6.1 0.0 2.8 3 1 1 4 4 4 0 Tetratrico peptide repeat HBM PF16591.5 gi|73669745|ref|YP_305760.1| - 0.089 12.2 0.9 0.24 10.8 0.6 1.7 2 0 0 2 2 2 0 Helical bimodular sensor domain CbiA PF01656.23 gi|73669746|ref|YP_305761.1| - 0.021 14.9 0.0 0.024 14.7 0.0 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|73669746|ref|YP_305761.1| - 0.046 13.2 0.0 0.55 9.6 0.0 2.0 1 1 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase AAA_26 PF13500.6 gi|73669746|ref|YP_305761.1| - 0.11 12.2 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain Asn_synthase PF00733.21 gi|73669747|ref|YP_305762.1| - 4.3e-55 187.8 0.3 7.4e-52 177.2 0.3 2.1 1 1 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 gi|73669747|ref|YP_305762.1| - 1.9e-20 73.0 0.0 4.2e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|73669747|ref|YP_305762.1| - 1e-13 51.6 0.0 3e-13 50.1 0.0 1.8 2 0 0 2 2 2 1 Glutamine amidotransferase domain NAD_synthase PF02540.17 gi|73669747|ref|YP_305762.1| - 0.0034 16.5 0.0 0.0052 15.9 0.0 1.2 1 0 0 1 1 1 1 NAD synthase ATP_bind_3 PF01171.20 gi|73669747|ref|YP_305762.1| - 0.064 13.0 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 PP-loop family Peripla_BP_2 PF01497.18 gi|73669750|ref|YP_305765.1| - 2.1e-30 106.1 1.2 2.6e-30 105.7 1.2 1.2 1 0 0 1 1 1 1 Periplasmic binding protein FecCD PF01032.18 gi|73669751|ref|YP_305766.1| - 9.1e-93 310.7 32.0 1.1e-92 310.4 32.0 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|73669751|ref|YP_305766.1| - 5e-05 22.9 17.0 5e-05 22.9 17.0 1.8 2 0 0 2 2 2 1 ABC 3 transport family ABC_tran PF00005.27 gi|73669752|ref|YP_305767.1| - 9.2e-31 107.2 0.1 1.3e-30 106.7 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669752|ref|YP_305767.1| - 1.9e-14 54.2 1.8 7.4e-08 32.6 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73669752|ref|YP_305767.1| - 4.3e-08 32.9 0.8 4.3e-07 29.6 0.8 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|73669752|ref|YP_305767.1| - 1.1e-05 25.3 3.2 0.0013 18.5 1.3 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|73669752|ref|YP_305767.1| - 6.1e-05 22.7 0.1 0.00013 21.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|73669752|ref|YP_305767.1| - 0.00013 22.5 0.1 0.00024 21.7 0.1 1.4 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|73669752|ref|YP_305767.1| - 0.00064 19.2 0.0 0.0011 18.4 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 gi|73669752|ref|YP_305767.1| - 0.0019 18.2 0.1 0.0042 17.0 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|73669752|ref|YP_305767.1| - 0.0025 18.1 0.1 0.045 14.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|73669752|ref|YP_305767.1| - 0.0074 16.7 0.5 0.078 13.4 0.5 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|73669752|ref|YP_305767.1| - 0.0084 15.8 0.0 0.02 14.6 0.0 1.6 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|73669752|ref|YP_305767.1| - 0.0098 16.3 0.0 0.02 15.3 0.0 1.5 1 0 0 1 1 1 1 RNA helicase AAA_27 PF13514.6 gi|73669752|ref|YP_305767.1| - 0.015 14.9 0.0 0.026 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|73669752|ref|YP_305767.1| - 0.018 14.8 0.5 0.052 13.3 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_PrkA PF08298.11 gi|73669752|ref|YP_305767.1| - 0.018 14.0 0.1 0.026 13.4 0.1 1.2 1 0 0 1 1 1 0 PrkA AAA domain PEPCK_ATP PF01293.20 gi|73669752|ref|YP_305767.1| - 0.021 13.5 0.0 0.026 13.2 0.0 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase AAA_5 PF07728.14 gi|73669752|ref|YP_305767.1| - 0.025 14.6 0.1 0.08 12.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|73669752|ref|YP_305767.1| - 0.026 14.9 0.0 0.05 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 gi|73669752|ref|YP_305767.1| - 0.046 13.6 0.1 0.095 12.6 0.1 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_19 PF13245.6 gi|73669752|ref|YP_305767.1| - 0.052 13.9 0.2 0.11 12.8 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|73669752|ref|YP_305767.1| - 0.061 13.3 0.1 1.3 9.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|73669752|ref|YP_305767.1| - 0.095 12.4 0.0 0.43 10.3 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein ABC_ATPase PF09818.9 gi|73669752|ref|YP_305767.1| - 0.11 11.3 0.0 1.7 7.3 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_18 PF13238.6 gi|73669752|ref|YP_305767.1| - 0.11 13.0 0.1 0.4 11.2 0.1 1.9 2 1 1 3 3 3 0 AAA domain LpxK PF02606.14 gi|73669752|ref|YP_305767.1| - 0.16 11.1 0.0 0.29 10.2 0.0 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase Peripla_BP_2 PF01497.18 gi|73669753|ref|YP_305768.1| - 2.3e-20 73.2 0.6 3.1e-20 72.8 0.6 1.1 1 0 0 1 1 1 1 Periplasmic binding protein DUF5119 PF17145.4 gi|73669753|ref|YP_305768.1| - 0.0079 16.2 0.1 0.016 15.1 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5119) Peripla_BP_2 PF01497.18 gi|73669754|ref|YP_305769.1| - 2.7e-19 69.7 0.5 3.8e-19 69.2 0.5 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Ycf4 PF02392.16 gi|73669754|ref|YP_305769.1| - 0.15 11.6 0.0 0.29 10.7 0.0 1.4 1 0 0 1 1 1 0 Ycf4 SBP_bac_6 PF13343.6 gi|73669755|ref|YP_305770.1| - 1.7e-66 224.2 0.0 2e-66 223.9 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein cobW PF02492.19 gi|73669756|ref|YP_305771.1| - 1e-10 41.5 0.1 1.5e-10 40.9 0.1 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|73669756|ref|YP_305771.1| - 2.6e-05 23.4 0.2 0.0066 15.5 0.1 2.1 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB KTI12 PF08433.10 gi|73669756|ref|YP_305771.1| - 0.00082 18.9 0.1 0.0012 18.4 0.1 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 ATP_bind_1 PF03029.17 gi|73669756|ref|YP_305771.1| - 0.0023 17.8 0.0 0.073 12.8 0.0 2.1 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein MobB PF03205.14 gi|73669756|ref|YP_305771.1| - 0.0023 17.8 0.1 0.0039 17.1 0.1 1.3 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 gi|73669756|ref|YP_305771.1| - 0.0032 17.4 0.2 0.0066 16.4 0.2 1.5 1 0 0 1 1 1 1 NTPase SRP54 PF00448.22 gi|73669756|ref|YP_305771.1| - 0.0043 16.7 0.0 0.032 13.9 0.0 2.3 1 1 0 2 2 2 1 SRP54-type protein, GTPase domain DnaB_C PF03796.15 gi|73669756|ref|YP_305771.1| - 0.011 15.0 0.0 0.024 14.0 0.0 1.5 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain Redoxin PF08534.10 gi|73669756|ref|YP_305771.1| - 0.018 14.8 0.0 0.19 11.4 0.0 2.4 3 0 0 3 3 3 0 Redoxin RecA PF00154.21 gi|73669756|ref|YP_305771.1| - 0.034 13.6 0.0 0.19 11.2 0.0 1.9 2 0 0 2 2 2 0 recA bacterial DNA recombination protein AAA_16 PF13191.6 gi|73669756|ref|YP_305771.1| - 0.043 14.2 0.0 0.044 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_35 PF14516.6 gi|73669756|ref|YP_305771.1| - 0.061 12.2 0.0 0.093 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain AAA_19 PF13245.6 gi|73669756|ref|YP_305771.1| - 0.064 13.6 0.1 0.1 12.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|73669756|ref|YP_305771.1| - 0.07 13.0 0.1 1.1 9.1 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase AAA_14 PF13173.6 gi|73669756|ref|YP_305771.1| - 0.097 12.7 0.0 0.2 11.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|73669756|ref|YP_305771.1| - 0.099 12.2 0.0 0.21 11.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region ATPase_2 PF01637.18 gi|73669756|ref|YP_305771.1| - 0.11 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|73669757|ref|YP_305772.1| - 4e-16 59.8 0.1 7.3e-16 58.9 0.1 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669757|ref|YP_305772.1| - 6e-10 39.4 0.0 0.00011 22.1 0.1 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73669757|ref|YP_305772.1| - 1.1e-06 28.2 0.4 1.6e-06 27.7 0.4 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|73669757|ref|YP_305772.1| - 0.00012 22.4 0.4 0.0016 18.8 0.4 2.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73669757|ref|YP_305772.1| - 0.00028 21.3 0.0 0.00086 19.7 0.0 1.8 2 1 0 2 2 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|73669757|ref|YP_305772.1| - 0.00029 20.6 0.0 0.0008 19.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|73669757|ref|YP_305772.1| - 0.004 16.9 0.0 0.037 13.7 0.0 2.2 1 1 1 2 2 2 1 AAA ATPase domain AAA_19 PF13245.6 gi|73669757|ref|YP_305772.1| - 0.0048 17.2 0.2 0.012 15.9 0.2 1.6 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|73669757|ref|YP_305772.1| - 0.0051 16.8 0.2 0.71 9.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 gi|73669757|ref|YP_305772.1| - 0.0079 16.7 0.2 0.02 15.4 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73669757|ref|YP_305772.1| - 0.0098 15.6 0.0 0.022 14.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 gi|73669757|ref|YP_305772.1| - 0.019 14.9 0.0 0.054 13.4 0.0 1.8 2 0 0 2 2 2 0 NACHT domain DUF1858 PF08984.11 gi|73669757|ref|YP_305772.1| - 0.024 14.8 0.0 0.06 13.5 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1858) ATPase_2 PF01637.18 gi|73669757|ref|YP_305772.1| - 0.026 14.4 0.2 0.23 11.3 0.2 2.2 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 gi|73669757|ref|YP_305772.1| - 0.027 14.4 0.3 0.23 11.3 0.0 2.5 1 1 2 3 3 3 0 RsgA GTPase DEAD PF00270.29 gi|73669757|ref|YP_305772.1| - 0.044 13.6 0.3 0.16 11.7 0.3 2.0 1 1 1 2 2 2 0 DEAD/DEAH box helicase ResIII PF04851.15 gi|73669757|ref|YP_305772.1| - 0.053 13.5 0.1 0.14 12.2 0.1 1.7 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit DNA_pol3_alpha PF07733.12 gi|73669757|ref|YP_305772.1| - 0.09 12.3 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial DNA polymerase III alpha NTPase domain HMGL-like PF00682.19 gi|73669758|ref|YP_305773.1| - 7.6e-14 51.9 0.0 1.1e-13 51.4 0.0 1.2 1 0 0 1 1 1 1 HMGL-like HMGL-like PF00682.19 gi|73669759|ref|YP_305774.1| - 1.4e-72 244.5 0.0 1.6e-72 244.3 0.0 1.0 1 0 0 1 1 1 1 HMGL-like Aconitase_C PF00694.19 gi|73669760|ref|YP_305775.1| - 4.3e-19 69.1 0.1 8.3e-19 68.2 0.1 1.5 1 1 0 1 1 1 1 Aconitase C-terminal domain Peripla_BP_2 PF01497.18 gi|73669761|ref|YP_305776.1| - 9.4e-31 107.2 1.2 7.9e-30 104.2 0.1 2.1 2 0 0 2 2 2 1 Periplasmic binding protein KdpD PF02702.17 gi|73669761|ref|YP_305776.1| - 0.068 12.6 0.1 0.72 9.3 0.0 2.2 2 0 0 2 2 2 0 Osmosensitive K+ channel His kinase sensor domain Nitro_FeMo-Co PF02579.17 gi|73669762|ref|YP_305777.1| - 1.9e-16 60.1 0.0 2.8e-16 59.6 0.0 1.3 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor Oxidored_nitro PF00148.19 gi|73669763|ref|YP_305778.1| - 3.3e-91 306.0 0.0 3.7e-91 305.8 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 gi|73669764|ref|YP_305779.1| - 3.6e-73 246.6 0.1 6e-73 245.9 0.1 1.3 1 1 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Zip PF02535.22 gi|73669765|ref|YP_305780.1| - 1.3e-08 34.5 14.0 3.1e-07 29.9 5.7 2.3 1 1 1 2 2 2 2 ZIP Zinc transporter YrhC PF14143.6 gi|73669765|ref|YP_305780.1| - 0.0088 16.1 3.4 0.48 10.6 0.2 3.2 2 1 1 3 3 3 1 YrhC-like protein PsbX PF06596.11 gi|73669765|ref|YP_305780.1| - 0.36 10.9 0.0 0.36 10.9 0.0 3.6 4 0 0 4 4 4 0 Photosystem II reaction centre X protein (PsbX) DUF3754 PF12576.8 gi|73669765|ref|YP_305780.1| - 0.66 9.9 5.5 1 9.3 0.9 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3754) AtpR PF12966.7 gi|73669765|ref|YP_305780.1| - 1.8 9.1 7.3 7 7.2 0.5 3.2 2 1 0 3 3 3 0 N-ATPase, AtpR subunit DUF4131 PF13567.6 gi|73669765|ref|YP_305780.1| - 2.7 7.6 9.3 36 4.0 3.9 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4131) Trp_oprn_chp PF09534.10 gi|73669765|ref|YP_305780.1| - 3.3 7.5 6.4 1.7 8.4 0.9 2.4 2 1 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF2157 PF09925.9 gi|73669765|ref|YP_305780.1| - 8.5 6.2 10.3 11 5.8 3.3 2.6 2 1 0 2 2 2 0 Predicted membrane protein (DUF2157) Oxidored_nitro PF00148.19 gi|73669766|ref|YP_305781.1| - 3.6e-123 411.3 0.0 4.1e-123 411.1 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase AnfG_VnfG PF03139.15 gi|73669767|ref|YP_305782.1| - 1e-43 147.9 1.6 1.2e-43 147.8 1.6 1.0 1 0 0 1 1 1 1 Vanadium/alternative nitrogenase delta subunit Oxidored_nitro PF00148.19 gi|73669768|ref|YP_305783.1| - 1.1e-110 370.1 0.1 1.3e-110 369.9 0.1 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Peripla_BP_2 PF01497.18 gi|73669768|ref|YP_305783.1| - 0.0019 17.8 0.0 0.0045 16.6 0.0 1.5 1 0 0 1 1 1 1 Periplasmic binding protein zf-HC5HC2H PF13771.6 gi|73669768|ref|YP_305783.1| - 0.056 13.7 0.0 0.16 12.2 0.0 1.7 1 0 0 1 1 1 0 PHD-like zinc-binding domain P-II PF00543.22 gi|73669769|ref|YP_305784.1| - 2.5e-33 114.7 0.6 3.1e-33 114.4 0.6 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF4363 PF14276.6 gi|73669769|ref|YP_305784.1| - 0.13 12.4 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4363) P-II PF00543.22 gi|73669770|ref|YP_305785.1| - 7e-27 94.0 0.5 7.8e-27 93.9 0.5 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II CdAMP_rec PF06153.11 gi|73669770|ref|YP_305785.1| - 0.00018 21.6 0.1 0.0028 17.9 0.1 2.2 1 1 0 1 1 1 1 Cyclic-di-AMP receptor Sigma70_r1_1 PF03979.14 gi|73669770|ref|YP_305785.1| - 0.044 13.8 0.1 0.082 13.0 0.1 1.4 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 Fer4_NifH PF00142.18 gi|73669771|ref|YP_305786.1| - 1.2e-127 425.0 3.0 1.4e-127 424.8 3.0 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|73669771|ref|YP_305786.1| - 3.5e-08 33.6 0.0 6.8e-08 32.6 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|73669771|ref|YP_305786.1| - 1.1e-06 28.7 0.6 3.8e-06 26.9 0.1 2.0 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|73669771|ref|YP_305786.1| - 8.7e-05 22.1 0.1 0.0093 15.4 0.0 2.3 2 0 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|73669771|ref|YP_305786.1| - 0.0027 17.0 0.1 0.0061 15.8 0.1 1.6 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_25 PF13481.6 gi|73669771|ref|YP_305786.1| - 0.16 11.5 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|73669771|ref|YP_305786.1| - 0.16 11.7 0.1 0.32 10.7 0.1 1.5 2 0 0 2 2 2 0 AAA domain Radical_SAM PF04055.21 gi|73669772|ref|YP_305787.1| - 7.1e-08 33.0 0.0 1.3e-07 32.1 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73669772|ref|YP_305787.1| - 0.0011 19.3 0.1 0.0023 18.2 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Peripla_BP_2 PF01497.18 gi|73669772|ref|YP_305787.1| - 0.025 14.1 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 Periplasmic binding protein Fer4_14 PF13394.6 gi|73669772|ref|YP_305787.1| - 0.063 13.4 0.1 0.2 11.8 0.1 1.9 1 0 0 1 1 1 0 4Fe-4S single cluster domain Thioredoxin PF00085.20 gi|73669773|ref|YP_305788.1| - 2e-12 47.0 0.0 2.8e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 gi|73669773|ref|YP_305788.1| - 0.00016 21.8 0.0 0.00042 20.4 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.6 gi|73669773|ref|YP_305788.1| - 0.00035 20.9 0.0 0.00076 19.8 0.0 1.6 2 0 0 2 2 2 1 Thioredoxin-like DIM1 PF02966.16 gi|73669773|ref|YP_305788.1| - 0.00046 20.0 0.0 0.00069 19.4 0.0 1.3 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_3 PF13192.6 gi|73669773|ref|YP_305788.1| - 0.00072 19.5 0.4 0.097 12.7 0.0 2.3 2 0 0 2 2 2 1 Thioredoxin domain DUF929 PF06053.11 gi|73669773|ref|YP_305788.1| - 0.0049 16.2 0.3 0.0066 15.8 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF929) Thioredoxin_9 PF14595.6 gi|73669773|ref|YP_305788.1| - 0.02 14.6 0.1 0.033 14.0 0.1 1.3 1 0 0 1 1 1 0 Thioredoxin Thioredoxin_6 PF13848.6 gi|73669773|ref|YP_305788.1| - 0.026 14.4 0.0 0.036 14.0 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain DUF836 PF05768.14 gi|73669773|ref|YP_305788.1| - 0.051 14.0 0.0 0.082 13.3 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) FliC PF12445.8 gi|73669773|ref|YP_305788.1| - 0.093 13.1 1.9 0.19 12.0 1.9 1.9 1 1 0 1 1 1 0 Flagellin protein MarR_2 PF12802.7 gi|73669775|ref|YP_305790.1| - 5.7e-05 22.9 0.0 8.5e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|73669775|ref|YP_305790.1| - 0.00028 20.6 0.0 0.00038 20.2 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|73669775|ref|YP_305790.1| - 0.0023 17.8 0.0 0.0037 17.1 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|73669775|ref|YP_305790.1| - 0.0072 16.2 0.1 0.013 15.4 0.0 1.5 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|73669775|ref|YP_305790.1| - 0.0087 15.6 0.3 0.017 14.7 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|73669775|ref|YP_305790.1| - 0.014 15.7 0.0 0.02 15.2 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator DprA_WH PF17782.1 gi|73669775|ref|YP_305790.1| - 0.016 15.3 0.0 0.02 15.0 0.0 1.2 1 0 0 1 1 1 0 DprA winged helix domain HTH_5 PF01022.20 gi|73669775|ref|YP_305790.1| - 0.016 15.0 0.0 0.023 14.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|73669775|ref|YP_305790.1| - 0.02 14.8 0.0 0.039 13.9 0.0 1.5 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain TBPIP PF07106.13 gi|73669775|ref|YP_305790.1| - 0.029 14.3 0.1 0.11 12.5 0.0 1.9 1 1 1 2 2 2 0 TBPIP/Hop2 winged helix domain Sigma54_DBD PF04552.13 gi|73669775|ref|YP_305790.1| - 0.091 12.5 0.1 0.12 12.1 0.1 1.4 1 1 0 1 1 1 0 Sigma-54, DNA binding domain HTH_20 PF12840.7 gi|73669775|ref|YP_305790.1| - 0.14 12.2 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain NiFeSe_Hases PF00374.19 gi|73669776|ref|YP_305791.1| - 6.5e-33 114.4 13.1 4e-16 59.0 0.5 4.9 1 1 1 3 3 3 3 Nickel-dependent hydrogenase Complex1_49kDa PF00346.19 gi|73669776|ref|YP_305791.1| - 0.044 12.9 0.0 0.12 11.5 0.1 1.6 2 0 0 2 2 2 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Bombolitin PF08096.11 gi|73669776|ref|YP_305791.1| - 0.58 10.5 2.0 4.9 7.6 0.1 3.1 3 0 0 3 3 3 0 Bombolitin family Oxidored_q6 PF01058.22 gi|73669778|ref|YP_305793.1| - 8.8e-28 96.7 0.2 8.8e-28 96.7 0.2 2.0 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.27 gi|73669778|ref|YP_305793.1| - 1.3e-12 47.0 16.7 1.1e-07 31.3 4.4 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73669778|ref|YP_305793.1| - 2.3e-08 34.0 17.9 2e-06 27.8 10.4 3.7 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73669778|ref|YP_305793.1| - 2.4e-07 31.6 9.7 0.0013 19.6 1.1 3.4 4 0 0 4 4 3 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|73669778|ref|YP_305793.1| - 4.9e-07 30.2 9.8 4.9e-07 30.2 9.8 2.9 2 2 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73669778|ref|YP_305793.1| - 8.4e-07 29.1 12.0 1e-06 28.8 9.1 2.5 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73669778|ref|YP_305793.1| - 1.8e-06 27.8 19.4 0.00012 22.0 3.4 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73669778|ref|YP_305793.1| - 2.6e-06 27.2 15.9 0.0022 18.0 2.5 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73669778|ref|YP_305793.1| - 7.8e-06 25.9 13.3 0.027 14.6 4.3 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73669778|ref|YP_305793.1| - 1.4e-05 25.2 16.8 0.004 17.5 1.2 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73669778|ref|YP_305793.1| - 0.00035 21.1 9.7 0.043 14.4 1.0 3.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|73669778|ref|YP_305793.1| - 0.0024 18.3 16.0 0.02 15.3 0.9 3.2 3 1 2 5 5 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73669778|ref|YP_305793.1| - 0.0029 18.1 15.0 0.14 12.7 1.5 3.1 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73669778|ref|YP_305793.1| - 0.59 10.3 7.9 2.5 8.3 7.8 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73669778|ref|YP_305793.1| - 0.59 10.9 14.2 2.1 9.1 2.6 3.4 3 2 0 3 3 3 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|73669778|ref|YP_305793.1| - 1.2 10.1 16.2 1.1 10.2 3.4 3.3 4 0 0 4 4 4 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73669778|ref|YP_305793.1| - 1.4 10.0 23.4 0.52 11.4 5.7 3.7 3 0 0 3 3 3 0 4Fe-4S binding domain FrhB_FdhB_C PF04432.13 gi|73669779|ref|YP_305794.1| - 5.7e-40 136.7 0.0 8.4e-40 136.1 0.0 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|73669779|ref|YP_305794.1| - 8.8e-30 102.7 0.0 1.8e-29 101.7 0.0 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Pentapeptide PF00805.22 gi|73669780|ref|YP_305795.1| - 2.6e-24 84.5 6.0 8.4e-08 31.7 0.0 4.3 3 1 3 6 6 6 4 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|73669780|ref|YP_305795.1| - 2.2e-14 53.4 4.0 4.8e-09 36.3 0.3 2.6 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|73669780|ref|YP_305795.1| - 3.1e-09 36.9 2.6 0.00031 20.8 0.7 3.5 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Hydrolase_4 PF12146.8 gi|73669782|ref|YP_305797.1| - 2.1e-08 33.8 0.3 1.4e-07 31.0 0.3 2.0 1 1 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|73669782|ref|YP_305797.1| - 2.8e-06 28.1 0.0 3.1e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|73669782|ref|YP_305797.1| - 3.7e-05 23.5 0.8 0.00015 21.5 0.3 2.0 1 1 1 2 2 2 1 alpha/beta hydrolase fold Lipase_3 PF01764.25 gi|73669782|ref|YP_305797.1| - 0.00071 19.5 0.0 0.0012 18.7 0.0 1.4 1 0 0 1 1 1 1 Lipase (class 3) DLH PF01738.18 gi|73669782|ref|YP_305797.1| - 0.022 14.3 0.2 3.5 7.1 0.1 2.9 2 1 0 2 2 2 0 Dienelactone hydrolase family HxlR PF01638.17 gi|73669783|ref|YP_305798.1| - 6e-26 90.1 0.2 6.9e-26 89.9 0.2 1.0 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|73669783|ref|YP_305798.1| - 0.13 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DUF2971 PF11185.8 gi|73669784|ref|YP_305799.1| - 0.92 10.7 8.9 7.5 7.8 0.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2971) DDE_5 PF13546.6 gi|73669785|ref|YP_305800.1| - 4.2e-49 167.3 0.0 5.8e-49 166.9 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_1 PF01609.21 gi|73669785|ref|YP_305800.1| - 2.7e-05 23.9 0.0 5.7e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain MC1 PF05854.11 gi|73669785|ref|YP_305800.1| - 0.11 12.8 0.0 0.23 11.8 0.0 1.5 1 0 0 1 1 1 0 Non-histone chromosomal protein MC1 zf-CDGSH PF09360.10 gi|73669787|ref|YP_305802.1| - 2.3e-38 130.1 2.1 6.7e-19 67.9 0.2 2.6 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 gi|73669787|ref|YP_305802.1| - 2.6e-13 49.8 0.0 8.5e-13 48.2 0.0 1.9 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster zf-UBR PF02207.20 gi|73669787|ref|YP_305802.1| - 0.069 13.3 3.4 6.4 7.0 0.1 2.5 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Ala_racemase_N PF01168.20 gi|73669788|ref|YP_305803.1| - 1e-20 74.4 0.0 1.2e-20 74.1 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Latarcin PF10279.9 gi|73669788|ref|YP_305803.1| - 0.12 12.8 0.4 11 6.5 0.1 2.4 2 0 0 2 2 2 0 Latarcin precursor DUF4268 PF14088.6 gi|73669788|ref|YP_305803.1| - 0.12 12.2 1.2 0.21 11.4 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4268) Carb_anhydrase PF00194.21 gi|73669788|ref|YP_305803.1| - 0.13 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Eukaryotic-type carbonic anhydrase TPP_enzyme_C PF02775.21 gi|73669789|ref|YP_305804.1| - 1.5e-08 34.6 0.0 2.8e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|73669789|ref|YP_305804.1| - 0.0025 17.6 0.0 0.0052 16.5 0.0 1.5 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transket_pyr PF02779.24 gi|73669789|ref|YP_305804.1| - 0.0037 17.0 0.0 0.0069 16.1 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain DXP_synthase_N PF13292.6 gi|73669789|ref|YP_305804.1| - 0.025 13.8 0.3 0.056 12.6 0.3 1.6 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Phage_holin_3_5 PF16085.5 gi|73669789|ref|YP_305804.1| - 0.057 13.6 2.9 2.6 8.2 0.0 2.3 2 0 0 2 2 2 0 Bacteriophage holin Hol, superfamily III Synaptobrevin PF00957.21 gi|73669789|ref|YP_305804.1| - 0.43 10.4 1.7 1.1 9.1 1.7 1.6 1 0 0 1 1 1 0 Synaptobrevin DUF1743 PF08489.11 gi|73669790|ref|YP_305805.1| - 1.4e-08 34.8 0.1 2.1e-05 24.6 0.0 3.7 2 1 1 3 3 3 1 Domain of unknown function (DUF1743) FMN_red PF03358.15 gi|73669791|ref|YP_305806.1| - 4.7e-30 104.4 0.0 6.5e-30 103.9 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73669791|ref|YP_305806.1| - 9.5e-09 35.2 0.0 1.1e-08 35.1 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|73669791|ref|YP_305806.1| - 0.14 12.4 0.0 3.3 7.9 0.0 2.3 2 1 0 2 2 2 0 Flavodoxin domain RadC PF04002.15 gi|73669792|ref|YP_305807.1| - 1.2e-45 154.4 0.0 1.7e-45 153.9 0.0 1.2 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.6 gi|73669792|ref|YP_305807.1| - 0.0017 18.1 0.0 0.0027 17.5 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain HHH PF00633.23 gi|73669792|ref|YP_305807.1| - 0.0061 16.4 0.0 0.014 15.2 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|73669792|ref|YP_305807.1| - 0.0079 16.8 0.0 0.017 15.8 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|73669792|ref|YP_305807.1| - 0.043 13.9 0.0 0.082 13.0 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|73669792|ref|YP_305807.1| - 0.15 11.9 0.1 0.28 11.0 0.1 1.4 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda MoaE PF02391.17 gi|73669793|ref|YP_305808.1| - 1.8e-26 92.6 0.2 2.9e-26 92.0 0.2 1.3 1 0 0 1 1 1 1 MoaE protein MobB PF03205.14 gi|73669793|ref|YP_305808.1| - 2e-14 53.6 0.0 3.8e-14 52.7 0.0 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B MgrB PF13998.6 gi|73669793|ref|YP_305808.1| - 0.1 12.5 0.3 0.19 11.6 0.3 1.4 1 0 0 1 1 1 0 MgrB protein NTP_transf_3 PF12804.7 gi|73669794|ref|YP_305809.1| - 1.9e-30 106.4 0.0 2.3e-30 106.1 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|73669794|ref|YP_305809.1| - 6.3e-05 22.8 0.0 8.2e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RPN6_C_helix PF18503.1 gi|73669794|ref|YP_305809.1| - 0.016 14.9 0.1 0.039 13.7 0.1 1.7 1 0 0 1 1 1 0 26S proteasome subunit RPN6 C-terminal helix domain HSP33 PF01430.19 gi|73669794|ref|YP_305809.1| - 0.17 11.3 0.1 0.28 10.6 0.1 1.4 1 0 0 1 1 1 0 Hsp33 protein COR PF16095.5 gi|73669795|ref|YP_305810.1| - 2.8e-58 197.0 0.3 7.8e-58 195.5 0.3 1.8 1 0 0 1 1 1 1 C-terminal of Roc, COR, domain LRR_8 PF13855.6 gi|73669795|ref|YP_305810.1| - 1.1e-41 140.4 62.2 4.2e-11 42.5 4.8 5.9 2 1 4 7 7 7 6 Leucine rich repeat LRR_4 PF12799.7 gi|73669795|ref|YP_305810.1| - 8.1e-38 127.8 55.8 2.2e-08 34.3 5.9 7.2 1 1 4 7 7 7 7 Leucine Rich repeats (2 copies) Roc PF08477.13 gi|73669795|ref|YP_305810.1| - 4.1e-33 114.2 0.1 8.6e-33 113.1 0.1 1.6 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 gi|73669795|ref|YP_305810.1| - 1.1e-12 47.8 0.0 2.4e-12 46.8 0.0 1.6 1 0 0 1 1 1 1 Ras family Arf PF00025.21 gi|73669795|ref|YP_305810.1| - 5.4e-11 42.2 0.0 1.3e-10 41.0 0.0 1.7 1 0 0 1 1 1 1 ADP-ribosylation factor family LRR_1 PF00560.33 gi|73669795|ref|YP_305810.1| - 4.8e-10 38.6 42.6 0.73 10.6 0.2 11.9 11 2 2 13 13 11 4 Leucine Rich Repeat LRR_6 PF13516.6 gi|73669795|ref|YP_305810.1| - 4e-05 23.3 37.3 5.2 7.4 0.1 9.7 9 0 0 9 9 9 3 Leucine Rich repeat MMR_HSR1 PF01926.23 gi|73669795|ref|YP_305810.1| - 5.8e-05 23.2 0.0 0.00022 21.3 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 gi|73669795|ref|YP_305810.1| - 0.0011 18.4 0.7 0.002 17.5 0.0 1.8 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region PduV-EutP PF10662.9 gi|73669795|ref|YP_305810.1| - 0.013 15.3 0.1 0.14 11.9 0.0 2.6 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 gi|73669795|ref|YP_305810.1| - 0.018 14.6 0.0 0.071 12.6 0.0 2.0 1 1 0 1 1 1 0 Ferrous iron transport protein B SRPRB PF09439.10 gi|73669795|ref|YP_305810.1| - 0.02 14.3 0.4 0.047 13.1 0.0 1.9 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Ycf4 PF02392.16 gi|73669795|ref|YP_305810.1| - 0.039 13.5 0.0 0.086 12.4 0.0 1.5 1 0 0 1 1 1 0 Ycf4 Latarcin PF10279.9 gi|73669795|ref|YP_305810.1| - 0.72 10.3 4.8 0.67 10.4 1.2 2.7 2 0 0 2 2 2 0 Latarcin precursor DKCLD PF08068.12 gi|73669795|ref|YP_305810.1| - 4.3 7.5 6.1 8.5 6.5 0.0 4.1 5 1 1 6 6 6 0 DKCLD (NUC011) domain DUF4366 PF14283.6 gi|73669796|ref|YP_305811.1| - 0.052 13.6 0.2 0.087 12.9 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) Rab5ip PF07019.12 gi|73669796|ref|YP_305811.1| - 0.16 12.6 6.2 0.28 11.8 6.2 1.4 1 0 0 1 1 1 0 Rab5-interacting protein (Rab5ip) DUF543 PF04418.12 gi|73669796|ref|YP_305811.1| - 0.16 12.0 0.2 0.24 11.4 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF543) Lactamase_B_2 PF12706.7 gi|73669797|ref|YP_305812.1| - 4.2e-06 26.4 0.1 3.6e-05 23.4 0.1 2.0 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|73669797|ref|YP_305812.1| - 0.0091 15.9 0.0 0.023 14.6 0.0 1.6 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|73669797|ref|YP_305812.1| - 0.4 10.7 3.3 2.1 8.3 3.3 2.1 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily DUF1699 PF08004.11 gi|73669798|ref|YP_305813.1| - 4.7e-61 204.2 1.8 5.4e-61 204.0 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|73669798|ref|YP_305813.1| - 0.12 12.7 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Thioredoxin PF00085.20 gi|73669799|ref|YP_305814.1| - 2.5e-24 85.2 0.0 2.7e-24 85.1 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|73669799|ref|YP_305814.1| - 6e-09 36.1 0.0 2.6e-06 27.7 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|73669799|ref|YP_305814.1| - 2.9e-08 34.1 0.1 8.7e-08 32.6 0.1 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain TraF PF13728.6 gi|73669799|ref|YP_305814.1| - 3.6e-07 30.2 0.0 3.9e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 F plasmid transfer operon protein Glutaredoxin PF00462.24 gi|73669799|ref|YP_305814.1| - 5.2e-07 29.8 0.0 8.7e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_9 PF14595.6 gi|73669799|ref|YP_305814.1| - 1.2e-06 28.3 0.0 1.5e-06 28.0 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.6 gi|73669799|ref|YP_305814.1| - 2.9e-06 27.2 0.0 3.4e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin domain Redoxin PF08534.10 gi|73669799|ref|YP_305814.1| - 5.7e-06 26.1 0.1 0.004 16.9 0.0 2.0 1 1 1 2 2 2 2 Redoxin KaiB PF07689.12 gi|73669799|ref|YP_305814.1| - 2.8e-05 23.8 0.0 3.2e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 KaiB domain Thioredoxin_7 PF13899.6 gi|73669799|ref|YP_305814.1| - 6.5e-05 23.0 0.0 9.5e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like ABC_transp_aux PF09822.9 gi|73669799|ref|YP_305814.1| - 0.0005 19.6 0.0 0.00056 19.4 0.0 1.0 1 0 0 1 1 1 1 ABC-type uncharacterized transport system DUF836 PF05768.14 gi|73669799|ref|YP_305814.1| - 0.00054 20.3 0.0 0.00058 20.2 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) HyaE PF07449.11 gi|73669799|ref|YP_305814.1| - 0.00079 19.4 0.0 0.00096 19.1 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE DSBA PF01323.20 gi|73669799|ref|YP_305814.1| - 0.0015 18.4 0.1 0.071 12.9 0.0 2.0 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_6 PF13848.6 gi|73669799|ref|YP_305814.1| - 0.0023 17.9 0.0 0.0023 17.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain AhpC-TSA PF00578.21 gi|73669799|ref|YP_305814.1| - 0.0041 17.0 0.1 0.074 13.0 0.0 1.9 1 1 1 2 2 2 1 AhpC/TSA family OST3_OST6 PF04756.13 gi|73669799|ref|YP_305814.1| - 0.0096 15.3 0.0 0.0096 15.3 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_5 PF13743.6 gi|73669799|ref|YP_305814.1| - 0.014 15.1 0.1 4.6 6.9 0.1 2.0 1 1 1 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 gi|73669799|ref|YP_305814.1| - 0.02 15.0 0.1 0.25 11.5 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin DUF953 PF06110.11 gi|73669799|ref|YP_305814.1| - 0.11 12.1 0.1 0.48 10.1 0.1 1.8 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) F420_ligase PF01996.16 gi|73669800|ref|YP_305815.1| - 5.3e-56 189.7 0.0 6.1e-56 189.5 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase MTHFR PF02219.17 gi|73669801|ref|YP_305816.1| - 1.7e-39 135.9 0.0 1.9e-39 135.7 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase MTHFR_C PF12225.8 gi|73669802|ref|YP_305817.1| - 1.9e-33 114.0 1.4 4.5e-33 112.8 1.4 1.6 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal DUF707 PF05212.12 gi|73669802|ref|YP_305817.1| - 0.14 11.4 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF707) Pterin_bind PF00809.22 gi|73669803|ref|YP_305818.1| - 1.6e-58 198.3 0.0 2.2e-58 197.8 0.0 1.2 1 0 0 1 1 1 1 Pterin binding enzyme THF_DHG_CYH_C PF02882.19 gi|73669804|ref|YP_305819.1| - 1.4e-64 216.2 2.8 2.1e-64 215.7 2.8 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|73669804|ref|YP_305819.1| - 1.1e-38 132.1 0.0 1.5e-38 131.6 0.0 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AdoHcyase_NAD PF00670.21 gi|73669804|ref|YP_305819.1| - 0.03 14.4 1.1 2 8.4 1.1 2.3 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Pox_TAA1 PF03295.14 gi|73669804|ref|YP_305819.1| - 0.14 12.0 0.1 6.1 6.8 0.0 2.4 2 1 0 2 2 2 0 Poxvirus trans-activator protein A1 C-terminal SHMT PF00464.19 gi|73669805|ref|YP_305820.1| - 4.5e-174 578.7 0.5 5.2e-174 578.5 0.5 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 gi|73669805|ref|YP_305820.1| - 0.00071 18.9 0.0 0.0014 18.0 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|73669805|ref|YP_305820.1| - 0.0021 17.4 0.0 0.0035 16.7 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 gi|73669805|ref|YP_305820.1| - 0.0041 15.9 0.0 0.0098 14.7 0.0 1.6 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain DrsE PF02635.15 gi|73669805|ref|YP_305820.1| - 0.023 15.1 0.0 0.067 13.6 0.0 1.8 1 0 0 1 1 1 0 DsrE/DsrF-like family Cys_Met_Meta_PP PF01053.20 gi|73669805|ref|YP_305820.1| - 0.031 12.8 0.0 0.045 12.3 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Formyl_trans_N PF00551.19 gi|73669806|ref|YP_305821.1| - 9.1e-57 191.7 0.0 1e-56 191.5 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase HTH_3 PF01381.22 gi|73669807|ref|YP_305822.1| - 1.4e-09 37.9 0.1 4e-09 36.4 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|73669807|ref|YP_305822.1| - 6.3e-07 29.3 0.4 5.5e-06 26.3 0.0 2.6 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|73669807|ref|YP_305822.1| - 0.00052 20.3 0.0 0.00099 19.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.23 gi|73669807|ref|YP_305822.1| - 0.0056 16.4 0.1 0.013 15.3 0.1 1.6 1 0 0 1 1 1 1 MerR family regulatory protein HTH_11 PF08279.12 gi|73669807|ref|YP_305822.1| - 0.0094 15.9 0.1 0.036 14.0 0.0 2.0 2 0 0 2 2 2 1 HTH domain Sigma70_r4 PF04545.16 gi|73669807|ref|YP_305822.1| - 0.028 13.9 0.2 0.078 12.5 0.1 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 MerR_1 PF13411.6 gi|73669807|ref|YP_305822.1| - 0.031 14.3 0.0 0.078 13.1 0.0 1.7 1 0 0 1 1 1 0 MerR HTH family regulatory protein DUF1743 PF08489.11 gi|73669808|ref|YP_305823.1| - 3.6e-44 149.5 0.0 7.8e-44 148.5 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.25 gi|73669808|ref|YP_305823.1| - 7.7e-06 25.8 0.0 1.5e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 gi|73669808|ref|YP_305823.1| - 0.00047 20.3 0.0 0.00093 19.4 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain zinc-ribbons_6 PF07191.12 gi|73669808|ref|YP_305823.1| - 0.0061 16.5 2.3 0.0061 16.5 2.3 1.8 2 0 0 2 2 1 1 zinc-ribbons Zn_Tnp_IS1595 PF12760.7 gi|73669808|ref|YP_305823.1| - 0.0065 16.4 4.2 0.015 15.2 4.2 1.6 1 0 0 1 1 1 1 Transposase zinc-ribbon domain C1_1 PF00130.22 gi|73669808|ref|YP_305823.1| - 0.017 15.0 2.0 0.033 14.1 2.0 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) OrfB_Zn_ribbon PF07282.11 gi|73669808|ref|YP_305823.1| - 0.027 14.4 2.7 0.027 14.4 2.7 1.9 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Zn_ribbon_SprT PF17283.2 gi|73669808|ref|YP_305823.1| - 0.042 13.8 3.0 0.16 11.9 2.6 2.0 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|73669808|ref|YP_305823.1| - 0.065 13.4 2.6 5.5 7.2 0.1 2.9 2 0 0 2 2 2 0 Zinc ribbon domain DZR PF12773.7 gi|73669808|ref|YP_305823.1| - 0.071 13.2 3.5 0.21 11.6 3.5 1.8 1 0 0 1 1 1 0 Double zinc ribbon RNA_POL_M_15KD PF02150.16 gi|73669808|ref|YP_305823.1| - 0.24 11.3 3.4 0.27 11.1 1.5 2.0 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Rep_fac-A_C PF08646.10 gi|73669808|ref|YP_305823.1| - 0.31 10.8 2.5 0.25 11.1 0.5 1.8 2 0 0 2 2 2 0 Replication factor-A C terminal domain DNA_RNApol_7kD PF03604.13 gi|73669808|ref|YP_305823.1| - 0.38 10.5 2.2 1.4 8.6 2.2 2.0 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|73669808|ref|YP_305823.1| - 2.9 7.6 4.5 5.2 6.8 0.2 2.6 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger NAD_synthase PF02540.17 gi|73669809|ref|YP_305824.1| - 6.3e-89 297.2 0.0 7.5e-89 297.0 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|73669809|ref|YP_305824.1| - 1.3e-05 24.2 0.0 8.1e-05 21.6 0.0 2.0 2 0 0 2 2 2 1 tRNA methyl transferase QueC PF06508.13 gi|73669809|ref|YP_305824.1| - 0.004 16.7 0.0 0.062 12.8 0.0 2.1 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|73669809|ref|YP_305824.1| - 0.014 15.1 0.0 0.019 14.7 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase NotI PF12183.8 gi|73669809|ref|YP_305824.1| - 0.025 13.9 0.0 0.042 13.2 0.0 1.3 1 0 0 1 1 1 0 Restriction endonuclease NotI ThiI PF02568.14 gi|73669809|ref|YP_305824.1| - 0.15 11.6 0.0 0.26 10.8 0.0 1.5 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) UBA_6 PF18039.1 gi|73669809|ref|YP_305824.1| - 0.19 11.7 0.3 0.98 9.4 0.2 2.1 1 1 1 2 2 2 0 UBA-like domain AAA PF00004.29 gi|73669810|ref|YP_305825.1| - 7.6e-97 320.8 0.0 2.3e-47 160.8 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|73669810|ref|YP_305825.1| - 7.6e-32 108.9 0.4 6.1e-18 64.3 0.1 2.8 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|73669810|ref|YP_305825.1| - 2.2e-30 104.7 0.3 8.7e-30 102.7 0.1 2.2 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.12 gi|73669810|ref|YP_305825.1| - 2.3e-15 56.7 0.0 1.6e-07 31.2 0.0 2.9 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain CDC48_2 PF02933.17 gi|73669810|ref|YP_305825.1| - 1.7e-14 53.3 0.8 1.7e-13 50.1 0.4 2.5 2 1 1 3 3 3 1 Cell division protein 48 (CDC48), domain 2 AAA_2 PF07724.14 gi|73669810|ref|YP_305825.1| - 3e-13 50.2 0.0 4.6e-05 23.6 0.0 3.0 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|73669810|ref|YP_305825.1| - 3.2e-13 50.4 0.5 0.00024 21.5 0.0 4.4 2 2 0 2 2 2 2 AAA ATPase domain AAA_5 PF07728.14 gi|73669810|ref|YP_305825.1| - 1e-12 48.2 0.2 6.5e-05 22.9 0.0 3.4 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) TIP49 PF06068.13 gi|73669810|ref|YP_305825.1| - 3.1e-11 43.1 1.4 1.4e-06 27.8 0.0 3.0 3 1 0 3 3 2 2 TIP49 P-loop domain AAA_22 PF13401.6 gi|73669810|ref|YP_305825.1| - 3.8e-11 43.4 1.2 0.013 15.8 0.1 4.4 2 2 1 3 3 3 3 AAA domain AAA_14 PF13173.6 gi|73669810|ref|YP_305825.1| - 2.7e-10 40.4 0.0 0.0002 21.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|73669810|ref|YP_305825.1| - 5.9e-09 35.9 0.0 0.001 18.9 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_33 PF13671.6 gi|73669810|ref|YP_305825.1| - 1.5e-08 35.0 0.0 0.0034 17.5 0.0 2.8 2 1 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|73669810|ref|YP_305825.1| - 2.6e-08 34.5 0.0 0.014 15.9 0.0 3.2 3 0 0 3 3 2 2 AAA domain Mg_chelatase PF01078.21 gi|73669810|ref|YP_305825.1| - 1.7e-06 27.6 0.5 0.045 13.1 0.1 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|73669810|ref|YP_305825.1| - 2.1e-06 27.3 0.0 0.029 13.9 0.0 2.8 2 1 0 2 2 2 2 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|73669810|ref|YP_305825.1| - 2.2e-06 28.0 0.0 0.081 13.3 0.0 2.6 2 0 0 2 2 2 2 RNA helicase Sigma54_activat PF00158.26 gi|73669810|ref|YP_305825.1| - 2.4e-06 27.4 0.1 0.057 13.1 0.0 3.6 3 1 0 3 3 3 2 Sigma-54 interaction domain AAA_28 PF13521.6 gi|73669810|ref|YP_305825.1| - 2.9e-06 27.6 0.0 0.083 13.1 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|73669810|ref|YP_305825.1| - 3.5e-06 26.7 1.2 1.3 8.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain AAA_24 PF13479.6 gi|73669810|ref|YP_305825.1| - 4.1e-06 26.6 0.0 0.085 12.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain ATPase PF06745.13 gi|73669810|ref|YP_305825.1| - 2e-05 24.0 2.1 0.038 13.3 0.0 3.8 5 0 0 5 5 3 1 KaiC Parvo_NS1 PF01057.17 gi|73669810|ref|YP_305825.1| - 2.2e-05 23.7 0.1 0.2 10.7 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 DUF815 PF05673.13 gi|73669810|ref|YP_305825.1| - 5.6e-05 22.4 0.0 0.051 12.7 0.0 2.7 2 0 0 2 2 2 1 Protein of unknown function (DUF815) Zeta_toxin PF06414.12 gi|73669810|ref|YP_305825.1| - 6.5e-05 22.3 0.2 0.14 11.4 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin TsaE PF02367.17 gi|73669810|ref|YP_305825.1| - 7.1e-05 22.8 0.0 0.35 10.9 0.0 2.6 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 gi|73669810|ref|YP_305825.1| - 0.0001 21.8 0.6 0.44 10.0 0.0 2.9 3 0 0 3 3 2 2 PhoH-like protein ABC_tran PF00005.27 gi|73669810|ref|YP_305825.1| - 0.00011 22.7 0.0 0.72 10.4 0.0 2.9 2 0 0 2 2 2 2 ABC transporter AAA_3 PF07726.11 gi|73669810|ref|YP_305825.1| - 0.00014 21.7 0.0 0.78 9.6 0.0 2.7 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 gi|73669810|ref|YP_305825.1| - 0.00023 21.6 0.0 0.64 10.4 0.0 3.2 3 0 0 3 3 2 1 AAA domain DUF2075 PF09848.9 gi|73669810|ref|YP_305825.1| - 0.00033 20.0 0.0 0.78 8.9 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) ATPase_2 PF01637.18 gi|73669810|ref|YP_305825.1| - 0.00036 20.5 0.1 0.73 9.7 0.0 3.6 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea NB-ARC PF00931.22 gi|73669810|ref|YP_305825.1| - 0.00045 19.5 0.0 0.82 8.8 0.0 2.6 3 0 0 3 3 2 2 NB-ARC domain AAA_30 PF13604.6 gi|73669810|ref|YP_305825.1| - 0.00084 19.1 1.3 1.1 9.0 0.0 2.7 3 0 0 3 3 2 2 AAA domain AAA_11 PF13086.6 gi|73669810|ref|YP_305825.1| - 0.00084 19.2 0.2 1.2 8.9 0.0 2.9 3 0 0 3 3 3 1 AAA domain Vps4_C PF09336.10 gi|73669810|ref|YP_305825.1| - 0.0012 18.8 0.2 0.16 12.0 0.0 2.7 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain NACHT PF05729.12 gi|73669810|ref|YP_305825.1| - 0.0015 18.5 0.3 8.6 6.3 0.1 3.9 4 0 0 4 4 4 0 NACHT domain AAA_19 PF13245.6 gi|73669810|ref|YP_305825.1| - 0.0017 18.7 2.4 2.2 8.6 0.0 3.1 2 1 1 3 3 3 2 AAA domain Bac_DnaA PF00308.18 gi|73669810|ref|YP_305825.1| - 0.0035 17.2 0.0 0.74 9.6 0.0 2.6 2 0 0 2 2 2 1 Bacterial dnaA protein TniB PF05621.11 gi|73669810|ref|YP_305825.1| - 0.0042 16.5 0.1 4.3 6.7 0.0 3.6 4 0 0 4 4 4 0 Bacterial TniB protein Guanylate_kin PF00625.21 gi|73669810|ref|YP_305825.1| - 0.0045 16.7 0.2 5.7 6.6 0.0 3.8 2 2 2 4 4 4 0 Guanylate kinase Sigma54_activ_2 PF14532.6 gi|73669810|ref|YP_305825.1| - 0.0056 16.8 0.0 5 7.2 0.0 2.5 2 0 0 2 2 2 0 Sigma-54 interaction domain Rad17 PF03215.15 gi|73669810|ref|YP_305825.1| - 0.0061 16.5 0.0 1.4 8.8 0.0 3.1 2 1 1 3 3 3 1 Rad17 P-loop domain Cytidylate_kin PF02224.18 gi|73669810|ref|YP_305825.1| - 0.0076 16.0 0.3 2 8.1 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase IPT PF01745.16 gi|73669810|ref|YP_305825.1| - 0.0083 15.5 0.1 2.1 7.7 0.0 2.5 2 0 0 2 2 2 1 Isopentenyl transferase ResIII PF04851.15 gi|73669810|ref|YP_305825.1| - 0.0084 16.1 0.0 2.8 7.9 0.0 3.1 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit Cytidylate_kin2 PF13189.6 gi|73669810|ref|YP_305825.1| - 0.0099 16.0 0.0 1 9.5 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase-like family NTPase_1 PF03266.15 gi|73669810|ref|YP_305825.1| - 0.014 15.3 1.8 8.8 6.2 0.0 3.7 2 1 1 3 3 3 0 NTPase SKI PF01202.22 gi|73669810|ref|YP_305825.1| - 0.036 14.2 0.5 5.7 7.1 0.0 2.9 3 0 0 3 3 2 0 Shikimate kinase ATP-synt_ab PF00006.25 gi|73669810|ref|YP_305825.1| - 0.072 12.7 0.0 7.3 6.2 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Zot PF05707.12 gi|73669810|ref|YP_305825.1| - 0.073 12.7 0.0 5.1 6.7 0.0 2.7 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) Hydin_ADK PF17213.3 gi|73669810|ref|YP_305825.1| - 0.1 12.9 1.7 3.5 7.9 0.1 2.4 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain AFG1_ATPase PF03969.16 gi|73669810|ref|YP_305825.1| - 0.13 11.1 0.0 14 4.4 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase RRM_DME PF15628.6 gi|73669810|ref|YP_305825.1| - 0.14 12.3 0.0 0.4 10.9 0.0 1.7 1 0 0 1 1 1 0 RRM in Demeter KAP_NTPase PF07693.14 gi|73669810|ref|YP_305825.1| - 0.16 11.2 0.4 5.3 6.2 0.0 2.8 3 1 1 4 4 4 0 KAP family P-loop domain Viral_helicase1 PF01443.18 gi|73669810|ref|YP_305825.1| - 0.18 11.5 0.0 1.4 8.6 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase PRC PF05239.16 gi|73669811|ref|YP_305826.1| - 4.7e-14 52.2 0.7 5.3e-14 52.1 0.7 1.1 1 0 0 1 1 1 1 PRC-barrel domain HTH_20 PF12840.7 gi|73669812|ref|YP_305827.1| - 1.9e-07 31.0 0.1 2.5e-07 30.7 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|73669812|ref|YP_305827.1| - 5e-07 29.5 0.2 1e-06 28.5 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|73669812|ref|YP_305827.1| - 0.00014 21.7 0.1 0.00028 20.8 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.6 gi|73669812|ref|YP_305827.1| - 0.00053 19.9 1.9 0.00069 19.5 1.3 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|73669812|ref|YP_305827.1| - 0.0013 18.6 0.0 0.0021 17.9 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|73669812|ref|YP_305827.1| - 0.0027 17.6 0.0 0.0045 16.9 0.0 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Mrr_N PF14338.6 gi|73669812|ref|YP_305827.1| - 0.004 17.2 0.0 0.0079 16.3 0.0 1.5 1 0 0 1 1 1 1 Mrr N-terminal domain HTH_24 PF13412.6 gi|73669812|ref|YP_305827.1| - 0.0088 15.6 0.1 0.016 14.8 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmO PF01980.16 gi|73669813|ref|YP_305828.1| - 5e-25 88.0 0.0 1.7e-24 86.3 0.0 1.8 2 0 0 2 2 2 1 tRNA-methyltransferase O GyrI-like PF06445.15 gi|73669813|ref|YP_305828.1| - 3.4e-22 79.4 2.1 4.7e-22 79.0 2.1 1.2 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 gi|73669813|ref|YP_305828.1| - 4.1e-09 36.8 0.5 7.4e-09 35.9 0.5 1.4 1 0 0 1 1 1 1 Integron-associated effector binding protein Cass2 PF14526.6 gi|73669814|ref|YP_305829.1| - 7.9e-14 52.1 5.0 9.3e-14 51.8 5.0 1.1 1 0 0 1 1 1 1 Integron-associated effector binding protein GyrI-like PF06445.15 gi|73669814|ref|YP_305829.1| - 2.4e-13 50.7 3.1 2.8e-13 50.5 3.1 1.1 1 0 0 1 1 1 1 GyrI-like small molecule binding domain DMA PF03474.14 gi|73669814|ref|YP_305829.1| - 0.18 11.4 0.0 0.31 10.7 0.0 1.3 1 0 0 1 1 1 0 DMRTA motif Methyltransf_25 PF13649.6 gi|73669815|ref|YP_305830.1| - 1.3e-10 41.8 0.0 2.1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669815|ref|YP_305830.1| - 2.6e-08 34.4 0.0 4.6e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|73669815|ref|YP_305830.1| - 2.9e-08 33.4 0.0 4.4e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.6 gi|73669815|ref|YP_305830.1| - 2.8e-05 24.0 0.1 6.6e-05 22.8 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|73669815|ref|YP_305830.1| - 9.2e-05 21.9 0.0 0.00013 21.4 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_23 PF13489.6 gi|73669815|ref|YP_305830.1| - 0.00024 21.0 0.0 0.00028 20.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73669815|ref|YP_305830.1| - 0.00082 19.0 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 gi|73669815|ref|YP_305830.1| - 0.0011 19.0 0.0 0.0019 18.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|73669815|ref|YP_305830.1| - 0.0045 16.8 0.0 0.007 16.1 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|73669815|ref|YP_305830.1| - 0.0074 15.6 0.3 0.013 14.8 0.0 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|73669815|ref|YP_305830.1| - 0.028 14.0 0.0 0.044 13.4 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_16 PF10294.9 gi|73669815|ref|YP_305830.1| - 0.028 14.1 0.0 0.048 13.4 0.0 1.4 1 1 0 1 1 1 0 Lysine methyltransferase Methyltransf_12 PF08242.12 gi|73669815|ref|YP_305830.1| - 0.034 14.9 0.0 0.05 14.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 gi|73669815|ref|YP_305830.1| - 0.068 12.2 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_18 PF12847.7 gi|73669815|ref|YP_305830.1| - 0.07 13.1 0.0 0.097 12.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|73669815|ref|YP_305830.1| - 0.1 12.0 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 gi|73669816|ref|YP_305831.1| - 2.3e-20 73.0 0.0 4e-20 72.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73669816|ref|YP_305831.1| - 7e-19 68.3 0.0 1.1e-18 67.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669816|ref|YP_305831.1| - 3.5e-16 59.4 0.0 4.6e-16 59.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73669816|ref|YP_305831.1| - 6.6e-15 55.3 0.0 8.8e-15 54.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73669816|ref|YP_305831.1| - 1.6e-09 38.4 0.0 2.8e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73669816|ref|YP_305831.1| - 2.5e-09 36.8 0.0 3.2e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrmA PF06325.13 gi|73669816|ref|YP_305831.1| - 2.1e-08 33.9 0.0 3.1e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 gi|73669816|ref|YP_305831.1| - 2.2e-06 27.2 0.4 4.5e-06 26.2 0.4 1.5 1 1 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|73669816|ref|YP_305831.1| - 6.3e-06 25.8 0.0 9.1e-06 25.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_29 PF03141.16 gi|73669816|ref|YP_305831.1| - 5.1e-05 22.0 0.1 0.0013 17.4 0.0 1.9 1 1 1 2 2 2 1 Putative S-adenosyl-L-methionine-dependent methyltransferase NodS PF05401.11 gi|73669816|ref|YP_305831.1| - 8e-05 22.3 0.0 0.00011 21.9 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MetW PF07021.12 gi|73669816|ref|YP_305831.1| - 0.00013 21.7 0.0 0.00018 21.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_9 PF08003.11 gi|73669816|ref|YP_305831.1| - 0.00049 19.1 0.0 0.00072 18.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) DREV PF05219.12 gi|73669816|ref|YP_305831.1| - 0.018 14.2 0.1 0.023 13.8 0.1 1.2 1 0 0 1 1 1 0 DREV methyltransferase Methyltransf_32 PF13679.6 gi|73669816|ref|YP_305831.1| - 0.023 14.7 0.0 0.044 13.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 gi|73669816|ref|YP_305831.1| - 0.025 13.7 0.0 0.033 13.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase FtsJ PF01728.19 gi|73669816|ref|YP_305831.1| - 0.026 14.7 0.1 0.063 13.4 0.1 1.7 1 1 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_18 PF12847.7 gi|73669816|ref|YP_305831.1| - 0.026 14.5 0.0 0.042 13.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Acetyltransf_1 PF00583.25 gi|73669817|ref|YP_305832.1| - 2.5e-06 27.7 0.0 3.1e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73669817|ref|YP_305832.1| - 2.1e-05 24.8 0.0 3.1e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73669817|ref|YP_305832.1| - 0.02 14.9 0.0 0.031 14.2 0.0 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73669817|ref|YP_305832.1| - 0.022 14.7 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein GrpB PF04229.14 gi|73669818|ref|YP_305833.1| - 2.8e-46 157.6 0.0 3.1e-46 157.5 0.0 1.0 1 0 0 1 1 1 1 GrpB protein MHB PF16525.5 gi|73669818|ref|YP_305833.1| - 0.0028 17.9 0.0 0.0065 16.7 0.0 1.6 2 0 0 2 2 2 1 Haemophore, haem-binding Methyltransf_11 PF08241.12 gi|73669819|ref|YP_305834.1| - 3.6e-22 78.8 0.0 7.3e-22 77.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73669819|ref|YP_305834.1| - 2.9e-19 69.6 0.0 7.3e-19 68.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73669819|ref|YP_305834.1| - 4.7e-18 65.6 0.0 8.3e-18 64.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669819|ref|YP_305834.1| - 3e-14 53.1 0.0 4.2e-14 52.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73669819|ref|YP_305834.1| - 2.7e-12 47.3 0.0 5.3e-12 46.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73669819|ref|YP_305834.1| - 3.4e-11 42.9 0.0 5.5e-11 42.3 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|73669819|ref|YP_305834.1| - 1.9e-08 34.2 0.0 2.8e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.14 gi|73669819|ref|YP_305834.1| - 4.3e-08 32.9 0.0 2.7e-07 30.3 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|73669819|ref|YP_305834.1| - 5.2e-06 26.0 0.1 7.3e-06 25.5 0.1 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_8 PF05148.15 gi|73669819|ref|YP_305834.1| - 3.4e-05 23.8 0.0 7.7e-05 22.6 0.0 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_32 PF13679.6 gi|73669819|ref|YP_305834.1| - 0.00021 21.3 0.0 0.00043 20.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_29 PF03141.16 gi|73669819|ref|YP_305834.1| - 0.00022 20.0 0.0 0.00027 19.6 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_16 PF10294.9 gi|73669819|ref|YP_305834.1| - 0.00032 20.5 0.0 0.00065 19.5 0.0 1.5 1 0 0 1 1 1 1 Lysine methyltransferase PCMT PF01135.19 gi|73669819|ref|YP_305834.1| - 0.00032 20.5 0.0 0.00064 19.5 0.0 1.5 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.11 gi|73669819|ref|YP_305834.1| - 0.00072 19.2 0.0 0.00096 18.8 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 gi|73669819|ref|YP_305834.1| - 0.0027 16.7 0.0 0.0055 15.7 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1698) DUF938 PF06080.12 gi|73669819|ref|YP_305834.1| - 0.0041 16.9 0.0 0.17 11.6 0.0 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF938) PrmA PF06325.13 gi|73669819|ref|YP_305834.1| - 0.0077 15.7 0.0 0.015 14.7 0.0 1.5 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.20 gi|73669819|ref|YP_305834.1| - 0.017 14.2 0.0 0.026 13.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase FtsJ PF01728.19 gi|73669819|ref|YP_305834.1| - 0.026 14.6 0.0 0.033 14.3 0.0 1.4 1 1 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_4 PF02390.17 gi|73669819|ref|YP_305834.1| - 0.036 13.5 0.0 2.7 7.4 0.0 2.4 2 1 0 2 2 2 0 Putative methyltransferase DPRP PF04244.13 gi|73669819|ref|YP_305834.1| - 0.056 13.3 0.0 0.099 12.5 0.0 1.4 1 0 0 1 1 1 0 Deoxyribodipyrimidine photo-lyase-related protein HyaE PF07449.11 gi|73669819|ref|YP_305834.1| - 0.11 12.4 0.0 0.31 11.0 0.0 1.7 2 0 0 2 2 2 0 Hydrogenase-1 expression protein HyaE Cupin_2 PF07883.11 gi|73669820|ref|YP_305835.1| - 1.5e-07 31.0 0.0 3.8e-07 29.7 0.0 1.6 1 1 1 2 2 2 1 Cupin domain AraC_binding PF02311.19 gi|73669820|ref|YP_305835.1| - 0.0012 18.7 0.0 0.0017 18.2 0.0 1.3 1 1 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|73669820|ref|YP_305835.1| - 0.0055 16.4 0.0 0.007 16.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) ARD PF03079.14 gi|73669820|ref|YP_305835.1| - 0.017 15.3 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 ARD/ARD' family MannoseP_isomer PF01050.18 gi|73669820|ref|YP_305835.1| - 0.054 13.4 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase EutQ PF06249.12 gi|73669820|ref|YP_305835.1| - 0.075 12.8 0.0 0.087 12.6 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ PRC PF05239.16 gi|73669821|ref|YP_305836.1| - 3.1e-15 56.0 0.0 3.9e-15 55.7 0.0 1.1 1 0 0 1 1 1 1 PRC-barrel domain O-antigen_lig PF13425.6 gi|73669822|ref|YP_305837.1| - 0.11 11.2 2.1 0.12 11.1 2.1 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein YXWGXW PF12779.7 gi|73669822|ref|YP_305837.1| - 0.92 9.7 10.4 0.9 9.8 6.3 2.4 2 0 0 2 2 2 0 YXWGXW repeat (2 copies) Transglut_core PF01841.19 gi|73669823|ref|YP_305838.1| - 2.4e-14 53.7 0.0 3.4e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily AAA_lid_7 PF17867.1 gi|73669823|ref|YP_305838.1| - 0.058 13.6 0.2 4.2 7.6 0.0 2.3 1 1 0 2 2 2 0 Midasin AAA lid domain Acetyltransf_1 PF00583.25 gi|73669824|ref|YP_305839.1| - 7.9e-14 51.9 0.2 6.2e-10 39.3 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|73669824|ref|YP_305839.1| - 8.5e-06 25.7 0.0 5e-05 23.2 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73669824|ref|YP_305839.1| - 1.8e-05 25.1 0.1 0.00013 22.3 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain NMT PF01233.19 gi|73669824|ref|YP_305839.1| - 0.14 12.0 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain DUF1891 PF09004.10 gi|73669824|ref|YP_305839.1| - 0.15 11.7 0.5 0.43 10.2 0.5 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1891) Hydrolase_3 PF08282.12 gi|73669825|ref|YP_305840.1| - 1.3e-29 103.8 2.8 1.8e-20 73.8 1.2 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|73669825|ref|YP_305840.1| - 9.1e-08 31.9 0.0 1.3e-05 24.9 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 gi|73669825|ref|YP_305840.1| - 2.1e-05 24.9 1.4 0.42 10.9 0.0 3.3 2 1 1 3 3 3 3 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|73669825|ref|YP_305840.1| - 0.0017 18.8 0.4 1.3 9.4 0.0 3.2 2 1 1 3 3 3 1 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.16 gi|73669825|ref|YP_305840.1| - 0.019 14.1 0.0 0.039 13.1 0.0 1.5 1 0 0 1 1 1 0 Trehalose-phosphatase Rad51 PF08423.11 gi|73669826|ref|YP_305841.1| - 1.6e-86 289.7 0.0 2.1e-86 289.3 0.0 1.1 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|73669826|ref|YP_305841.1| - 3e-13 50.1 0.7 7.3e-13 48.9 0.4 1.8 2 0 0 2 2 1 1 Helix-hairpin-helix domain RecA PF00154.21 gi|73669826|ref|YP_305841.1| - 2.6e-09 36.9 0.1 1e-07 31.7 0.1 2.2 1 1 0 1 1 1 1 recA bacterial DNA recombination protein ATPase PF06745.13 gi|73669826|ref|YP_305841.1| - 5.8e-09 35.6 0.1 9.4e-09 35.0 0.1 1.4 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|73669826|ref|YP_305841.1| - 1e-07 31.8 0.0 1.7e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain HHH PF00633.23 gi|73669826|ref|YP_305841.1| - 9.5e-07 28.4 2.7 0.0027 17.5 0.1 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|73669826|ref|YP_305841.1| - 2.8e-06 27.3 0.2 6.2e-06 26.2 0.2 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif Cdd1 PF11731.8 gi|73669826|ref|YP_305841.1| - 7.5e-05 22.9 0.0 0.00033 20.8 0.0 2.0 2 1 1 3 3 2 1 Pathogenicity locus AAA_22 PF13401.6 gi|73669826|ref|YP_305841.1| - 0.00032 21.0 0.0 0.00066 20.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|73669826|ref|YP_305841.1| - 0.00034 20.4 0.0 0.00063 19.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain DNA_pol_lambd_f PF10391.9 gi|73669826|ref|YP_305841.1| - 0.00063 19.5 0.0 0.0023 17.7 0.0 2.0 1 1 1 2 2 2 1 Fingers domain of DNA polymerase lambda IMS_HHH PF11798.8 gi|73669826|ref|YP_305841.1| - 0.0053 17.0 0.0 0.024 15.0 0.0 2.2 2 0 0 2 2 2 1 IMS family HHH motif HHH_8 PF14716.6 gi|73669826|ref|YP_305841.1| - 0.0069 16.7 0.2 0.54 10.7 0.0 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_3 PF12836.7 gi|73669826|ref|YP_305841.1| - 0.0071 16.6 0.4 2.5 8.4 0.1 2.7 3 0 0 3 3 2 1 Helix-hairpin-helix motif NACHT PF05729.12 gi|73669826|ref|YP_305841.1| - 0.022 14.7 0.0 0.042 13.8 0.0 1.5 1 1 0 1 1 1 0 NACHT domain BAF PF02961.14 gi|73669826|ref|YP_305841.1| - 0.023 15.1 0.0 0.18 12.3 0.0 2.2 2 0 0 2 2 2 0 Barrier to autointegration factor ATP-synt_ab PF00006.25 gi|73669826|ref|YP_305841.1| - 0.036 13.7 0.0 0.073 12.7 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain ATPase_2 PF01637.18 gi|73669826|ref|YP_305841.1| - 0.037 13.9 0.0 0.057 13.3 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea TniB PF05621.11 gi|73669826|ref|YP_305841.1| - 0.056 12.8 0.0 0.11 11.9 0.0 1.4 1 1 0 1 1 1 0 Bacterial TniB protein PhoH PF02562.16 gi|73669826|ref|YP_305841.1| - 0.062 12.8 0.0 0.13 11.7 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein DUF4332 PF14229.6 gi|73669826|ref|YP_305841.1| - 0.065 13.5 0.0 0.15 12.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) ABC_tran PF00005.27 gi|73669826|ref|YP_305841.1| - 0.073 13.6 0.1 5.4 7.5 0.1 2.4 2 0 0 2 2 2 0 ABC transporter LytR_C PF13399.6 gi|73669826|ref|YP_305841.1| - 0.085 13.9 0.4 0.72 10.9 0.2 2.4 3 0 0 3 3 2 0 LytR cell envelope-related transcriptional attenuator TsaE PF02367.17 gi|73669826|ref|YP_305841.1| - 0.092 12.7 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DnaB_C PF03796.15 gi|73669826|ref|YP_305841.1| - 0.097 12.0 0.0 0.17 11.2 0.0 1.4 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain CTP_transf_like PF01467.26 gi|73669827|ref|YP_305842.1| - 8.6e-13 48.7 0.0 1e-12 48.5 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|73669827|ref|YP_305842.1| - 0.027 14.4 0.1 0.049 13.5 0.1 1.4 1 0 0 1 1 1 0 FAD synthetase DUF4351 PF14261.6 gi|73669828|ref|YP_305843.1| - 0.026 14.6 0.2 0.07 13.2 0.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4351) AP_endonuc_2 PF01261.24 gi|73669829|ref|YP_305844.1| - 2.6e-20 72.8 0.0 3e-20 72.6 0.0 1.0 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF378 PF04070.12 gi|73669830|ref|YP_305845.1| - 7.4e-23 80.2 7.4 9.7e-23 79.8 7.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF378) PMP1_2 PF08114.11 gi|73669830|ref|YP_305845.1| - 0.13 12.0 1.2 0.32 10.8 0.1 2.0 2 0 0 2 2 2 0 ATPase proteolipid family Halogen_Hydrol PF10112.9 gi|73669830|ref|YP_305845.1| - 0.15 12.1 0.3 0.18 11.8 0.3 1.1 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein ADH_zinc_N PF00107.26 gi|73669831|ref|YP_305846.1| - 5.1e-18 65.3 0.3 8.3e-18 64.6 0.3 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|73669831|ref|YP_305846.1| - 2.8e-15 56.2 0.0 1.2e-14 54.0 0.0 2.0 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 gi|73669831|ref|YP_305846.1| - 4.8e-08 34.1 0.0 1e-07 33.0 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Sod_Cu PF00080.20 gi|73669832|ref|YP_305847.1| - 1.4e-43 148.4 2.4 1.8e-43 148.1 2.4 1.1 1 0 0 1 1 1 1 Copper/zinc superoxide dismutase (SODC) Prenyltransf PF01255.19 gi|73669833|ref|YP_305848.1| - 4.7e-41 140.8 0.0 5.9e-41 140.4 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Dynein_IC2 PF11540.8 gi|73669833|ref|YP_305848.1| - 0.078 13.0 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 Cytoplasmic dynein 1 intermediate chain 2 P-II PF00543.22 gi|73669834|ref|YP_305849.1| - 2.1e-28 98.9 0.9 2.4e-28 98.7 0.9 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF1859 PF08948.10 gi|73669835|ref|YP_305850.1| - 0.093 12.7 1.7 0.57 10.1 0.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1859) Methyltransf_23 PF13489.6 gi|73669836|ref|YP_305851.1| - 8.6e-05 22.4 0.0 0.00014 21.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669836|ref|YP_305851.1| - 0.11 13.2 0.0 0.31 11.7 0.0 1.8 1 0 0 1 1 1 0 Methyltransferase domain Brr6_like_C_C PF10104.9 gi|73669836|ref|YP_305851.1| - 0.12 12.2 0.0 0.25 11.1 0.0 1.5 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain PrmA PF06325.13 gi|73669836|ref|YP_305851.1| - 0.16 11.4 0.2 0.27 10.6 0.2 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DDE_3 PF13358.6 gi|73669837|ref|YP_305852.1| - 4.1e-09 36.4 0.0 4.3e-09 36.3 0.0 1.0 1 0 0 1 1 1 1 DDE superfamily endonuclease Zn_ribbon_SprT PF17283.2 gi|73669838|ref|YP_305853.1| - 0.00015 21.6 0.3 0.00022 21.1 0.3 1.2 1 0 0 1 1 1 1 SprT-like zinc ribbon domain zinc_ribbon_6 PF14599.6 gi|73669838|ref|YP_305853.1| - 0.047 13.7 0.6 0.1 12.6 0.6 1.6 1 1 1 2 2 2 0 Zinc-ribbon HicB_lk_antitox PF15919.5 gi|73669840|ref|YP_305855.1| - 1.4e-12 47.8 0.1 1.4e-12 47.7 0.1 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system FANCI_S1-cap PF14674.6 gi|73669840|ref|YP_305855.1| - 0.0053 16.8 0.1 0.0073 16.4 0.1 1.4 1 1 0 1 1 1 1 FANCI solenoid 1 cap Jag_N PF14804.6 gi|73669840|ref|YP_305855.1| - 0.34 11.3 2.6 6.8 7.1 2.6 2.3 1 1 0 1 1 1 0 Jag N-terminus HicA_toxin PF07927.12 gi|73669841|ref|YP_305856.1| - 8.5e-16 57.7 0.4 1.1e-15 57.4 0.4 1.2 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, APG6_N PF17675.1 gi|73669842|ref|YP_305857.1| - 2.4e-07 31.3 2.3 3.4e-07 30.8 2.3 1.3 1 0 0 1 1 1 1 Apg6 coiled-coil region Seryl_tRNA_N PF02403.22 gi|73669842|ref|YP_305857.1| - 0.00081 19.6 11.1 0.0018 18.5 11.1 1.6 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain STAT_alpha PF01017.20 gi|73669842|ref|YP_305857.1| - 0.0016 18.3 8.5 0.025 14.5 6.8 2.1 2 0 0 2 2 2 1 STAT protein, all-alpha domain DivIC PF04977.15 gi|73669842|ref|YP_305857.1| - 0.0021 17.8 8.5 0.0026 17.5 6.9 2.0 1 1 0 1 1 1 1 Septum formation initiator CASP_C PF08172.12 gi|73669842|ref|YP_305857.1| - 0.0029 17.0 2.8 0.0044 16.4 2.8 1.2 1 0 0 1 1 1 1 CASP C terminal DUF3450 PF11932.8 gi|73669842|ref|YP_305857.1| - 0.016 14.5 5.3 0.028 13.7 5.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1664 PF07889.12 gi|73669842|ref|YP_305857.1| - 0.042 13.9 7.6 0.035 14.2 6.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Suppressor_APC PF11414.8 gi|73669842|ref|YP_305857.1| - 0.081 13.0 4.8 0.18 11.9 4.8 1.5 1 0 0 1 1 1 0 Adenomatous polyposis coli tumour suppressor protein DUF2203 PF09969.9 gi|73669842|ref|YP_305857.1| - 0.12 13.1 5.0 0.28 11.9 5.0 1.6 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF4131 PF13567.6 gi|73669842|ref|YP_305857.1| - 0.14 11.8 0.7 0.21 11.2 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Jnk-SapK_ap_N PF09744.9 gi|73669842|ref|YP_305857.1| - 0.15 12.3 10.9 0.25 11.5 10.9 1.3 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Phage_holin_3_6 PF07332.11 gi|73669842|ref|YP_305857.1| - 0.17 11.9 2.6 0.35 10.9 0.5 2.3 2 1 1 3 3 2 0 Putative Actinobacterial Holin-X, holin superfamily III COG6 PF06419.11 gi|73669842|ref|YP_305857.1| - 0.2 9.9 5.3 0.27 9.4 5.3 1.1 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 Spc7 PF08317.11 gi|73669842|ref|YP_305857.1| - 0.22 10.3 12.6 0.34 9.7 12.6 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein DASH_Dam1 PF08653.10 gi|73669842|ref|YP_305857.1| - 0.25 11.2 5.8 0.49 10.2 1.0 3.3 2 1 2 4 4 4 0 DASH complex subunit Dam1 DUF3488 PF11992.8 gi|73669842|ref|YP_305857.1| - 0.25 10.2 2.3 0.35 9.8 2.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) JIP_LZII PF16471.5 gi|73669842|ref|YP_305857.1| - 0.31 11.3 12.2 0.71 10.1 11.4 2.0 1 1 0 1 1 1 0 JNK-interacting protein leucine zipper II zf-C4H2 PF10146.9 gi|73669842|ref|YP_305857.1| - 0.4 11.0 9.2 0.6 10.4 9.2 1.2 1 0 0 1 1 1 0 Zinc finger-containing protein Ax_dynein_light PF10211.9 gi|73669842|ref|YP_305857.1| - 0.73 9.7 9.8 1.4 8.8 9.8 1.5 1 0 0 1 1 1 0 Axonemal dynein light chain Nup88 PF10168.9 gi|73669842|ref|YP_305857.1| - 0.82 7.4 7.7 1.1 7.0 7.7 1.2 1 0 0 1 1 1 0 Nuclear pore component TMPIT PF07851.13 gi|73669842|ref|YP_305857.1| - 1 8.5 8.6 2 7.6 8.6 1.4 1 0 0 1 1 1 0 TMPIT-like protein UPF0184 PF03670.13 gi|73669842|ref|YP_305857.1| - 1.6 9.1 8.0 2.8 8.4 5.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0184) DUF2937 PF11157.8 gi|73669842|ref|YP_305857.1| - 1.9 8.2 0.0 1.9 8.2 0.0 2.5 3 0 0 3 3 2 0 Protein of unknown function (DUF2937) Atg14 PF10186.9 gi|73669842|ref|YP_305857.1| - 2.3 7.2 7.7 3.3 6.7 7.7 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 bZIP_1 PF00170.21 gi|73669842|ref|YP_305857.1| - 5.2 7.3 13.6 2.1 8.5 7.9 2.7 2 1 1 3 3 3 0 bZIP transcription factor Uteroglobin PF01099.17 gi|73669842|ref|YP_305857.1| - 6.5 7.2 6.1 26 5.3 3.4 2.5 1 1 1 2 2 2 0 Uteroglobin family DUF429 PF04250.13 gi|73669843|ref|YP_305858.1| - 0.036 13.8 0.0 0.036 13.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF429) CmcI PF04989.12 gi|73669845|ref|YP_305860.1| - 0.17 11.6 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 Cephalosporin hydroxylase HTH_Tnp_Tc3_1 PF11427.8 gi|73669846|ref|YP_305861.1| - 0.0096 15.8 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 1 Tc3 transposase HTH_29 PF13551.6 gi|73669846|ref|YP_305861.1| - 0.02 14.9 0.1 0.048 13.7 0.1 1.7 1 1 0 1 1 1 0 Winged helix-turn helix Phage_NinH PF06322.11 gi|73669846|ref|YP_305861.1| - 0.023 14.6 0.0 0.039 13.8 0.0 1.3 1 0 0 1 1 1 0 Phage NinH protein HTH_38 PF13936.6 gi|73669846|ref|YP_305861.1| - 0.05 13.4 0.0 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|73669846|ref|YP_305861.1| - 0.07 13.2 0.1 0.43 10.7 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_5 PF01022.20 gi|73669846|ref|YP_305861.1| - 0.16 11.8 0.1 0.48 10.3 0.1 1.8 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family RHH_3 PF12651.7 gi|73669847|ref|YP_305862.1| - 0.00089 19.2 0.6 0.19 11.7 0.0 2.7 3 0 0 3 3 3 2 Ribbon-helix-helix domain RITA PF17066.5 gi|73669847|ref|YP_305862.1| - 0.063 12.9 0.0 0.072 12.7 0.0 1.2 1 0 0 1 1 1 0 RBPJ-interacting and tubulin associated protein HisKA_2 PF07568.12 gi|73669848|ref|YP_305863.1| - 3.5e-32 110.3 2.1 1.6e-31 108.2 2.1 2.2 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.12 gi|73669848|ref|YP_305863.1| - 4.9e-16 58.8 0.0 1.4e-15 57.3 0.0 1.8 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|73669848|ref|YP_305863.1| - 1.5e-09 38.3 0.1 4.9e-09 36.7 0.1 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|73669848|ref|YP_305863.1| - 3.4e-05 24.0 1.4 0.00027 21.1 0.1 3.1 3 1 0 3 3 3 1 PAS domain HWE_HK PF07536.14 gi|73669848|ref|YP_305863.1| - 7.2e-05 23.4 1.7 0.00037 21.2 0.7 2.4 2 0 0 2 2 2 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|73669848|ref|YP_305863.1| - 0.00015 21.7 0.0 0.00036 20.5 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain SPOB_a PF14689.6 gi|73669848|ref|YP_305863.1| - 0.046 13.4 0.1 0.57 9.9 0.0 2.6 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_5 PF14501.6 gi|73669848|ref|YP_305863.1| - 0.073 13.0 1.0 0.2 11.6 1.0 1.7 1 0 0 1 1 1 0 GHKL domain HicB_lk_antitox PF15919.5 gi|73669849|ref|YP_305864.1| - 1.4e-12 47.8 0.1 1.4e-12 47.7 0.1 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system FANCI_S1-cap PF14674.6 gi|73669849|ref|YP_305864.1| - 0.006 16.6 0.1 0.0091 16.1 0.1 1.4 1 1 0 1 1 1 1 FANCI solenoid 1 cap Jag_N PF14804.6 gi|73669849|ref|YP_305864.1| - 0.33 11.3 2.6 6.8 7.1 2.6 2.3 1 1 0 1 1 1 0 Jag N-terminus HicA_toxin PF07927.12 gi|73669850|ref|YP_305865.1| - 1.9e-14 53.4 0.2 2.3e-14 53.2 0.2 1.1 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, zinc_ribbon_6 PF14599.6 gi|73669851|ref|YP_305866.1| - 0.0003 20.7 1.2 0.012 15.6 2.0 2.0 1 1 1 2 2 2 2 Zinc-ribbon OrfB_Zn_ribbon PF07282.11 gi|73669851|ref|YP_305866.1| - 0.019 14.8 0.6 0.02 14.8 0.6 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain eIF-1a PF01176.19 gi|73669852|ref|YP_305867.1| - 1.6e-10 40.7 1.0 2.1e-10 40.2 1.0 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DUF1317 PF07026.11 gi|73669852|ref|YP_305867.1| - 0.12 12.2 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1317) zinc_ribbon_6 PF14599.6 gi|73669853|ref|YP_305868.1| - 0.0066 16.4 2.5 0.091 12.8 0.2 2.1 1 1 1 2 2 2 2 Zinc-ribbon Zn_ribbon_SprT PF17283.2 gi|73669853|ref|YP_305868.1| - 0.021 14.7 0.4 0.031 14.2 0.4 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain HicB_lk_antitox PF15919.5 gi|73669854|ref|YP_305869.1| - 9.5e-05 22.5 0.0 0.00011 22.3 0.0 1.1 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system HicB_lk_antitox PF15919.5 gi|73669855|ref|YP_305870.1| - 1.9e-13 50.6 0.0 2.2e-13 50.4 0.0 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system Lipocalin_4 PF13648.6 gi|73669856|ref|YP_305871.1| - 0.036 15.0 1.7 0.047 14.7 1.7 1.2 1 0 0 1 1 1 0 Lipocalin-like domain B3 PF02362.21 gi|73669856|ref|YP_305871.1| - 0.084 12.7 0.1 0.13 12.2 0.1 1.4 1 0 0 1 1 1 0 B3 DNA binding domain DUF3219 PF11514.8 gi|73669857|ref|YP_305872.1| - 0.069 13.2 0.5 0.22 11.5 0.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3219) TINF2_N PF14973.6 gi|73669857|ref|YP_305872.1| - 2 8.7 4.4 12 6.3 0.1 2.5 3 0 0 3 3 3 0 TERF1-interacting nuclear factor 2 N-terminus PNP_UDP_1 PF01048.20 gi|73669858|ref|YP_305873.1| - 9.8e-22 77.3 0.0 2.1e-21 76.3 0.0 1.5 1 0 0 1 1 1 1 Phosphorylase superfamily HEAT_2 PF13646.6 gi|73669858|ref|YP_305873.1| - 2.3e-11 43.9 0.8 0.00087 19.6 0.0 5.2 3 2 1 5 5 5 2 HEAT repeats HEAT PF02985.22 gi|73669858|ref|YP_305873.1| - 1.8e-06 27.7 0.9 0.15 12.4 0.0 5.9 6 0 0 6 6 6 1 HEAT repeat Cnd1 PF12717.7 gi|73669858|ref|YP_305873.1| - 7.7e-06 26.0 4.9 0.0004 20.5 0.2 3.7 2 1 1 3 3 3 1 non-SMC mitotic condensation complex subunit 1 Apolipoprotein PF01442.18 gi|73669858|ref|YP_305873.1| - 0.0021 17.9 5.4 0.0047 16.8 5.4 1.5 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain Nipped-B_C PF12830.7 gi|73669858|ref|YP_305873.1| - 0.047 13.6 2.1 0.14 12.1 0.4 2.5 2 1 0 2 2 2 0 Sister chromatid cohesion C-terminus DUF2599 PF10783.9 gi|73669858|ref|YP_305873.1| - 0.05 14.3 0.3 7.5 7.3 0.0 4.1 4 0 0 4 4 4 0 Protein of unknown function (DUF2599) Elongin_A PF06881.11 gi|73669858|ref|YP_305873.1| - 3.3 8.3 8.6 8.4 7.0 0.4 3.9 2 1 2 4 4 4 0 RNA polymerase II transcription factor SIII (Elongin) subunit A V-ATPase_H_C PF11698.8 gi|73669858|ref|YP_305873.1| - 5 7.3 12.5 2.2 8.4 0.3 5.6 4 1 2 6 6 6 0 V-ATPase subunit H Arginosuc_synth PF00764.19 gi|73669859|ref|YP_305874.1| - 1.1e-181 604.4 0.1 1.2e-181 604.2 0.1 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|73669859|ref|YP_305874.1| - 0.00039 20.0 0.1 0.0029 17.1 0.0 2.0 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|73669859|ref|YP_305874.1| - 0.006 15.7 0.0 0.01 14.9 0.0 1.5 1 1 0 1 1 1 1 NAD synthase Asn_synthase PF00733.21 gi|73669859|ref|YP_305874.1| - 0.024 14.3 0.0 0.036 13.7 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase tRNA_Me_trans PF03054.16 gi|73669859|ref|YP_305874.1| - 0.039 12.7 0.0 0.063 12.1 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase CPSase_L_D2 PF02786.17 gi|73669860|ref|YP_305875.1| - 1.2e-106 355.0 1.0 6.4e-70 234.9 0.2 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|73669860|ref|YP_305875.1| - 4.7e-44 149.7 0.1 1.7e-43 147.8 0.1 2.1 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 gi|73669860|ref|YP_305875.1| - 2.5e-23 82.1 0.3 9.4e-21 73.8 0.0 4.2 4 1 0 4 4 4 1 MGS-like domain Dala_Dala_lig_C PF07478.13 gi|73669860|ref|YP_305875.1| - 1.5e-17 63.8 0.1 2.2e-07 30.6 0.0 2.5 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 gi|73669860|ref|YP_305875.1| - 3.3e-17 62.6 0.1 1e-08 34.9 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|73669860|ref|YP_305875.1| - 2.2e-14 53.3 0.0 1.8e-06 27.7 0.0 3.2 3 1 0 3 3 3 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|73669860|ref|YP_305875.1| - 2.7e-09 37.3 0.5 0.00082 19.5 0.0 2.6 2 0 0 2 2 2 2 ATP-grasp domain GARS_A PF01071.19 gi|73669860|ref|YP_305875.1| - 5.1e-07 29.7 0.1 0.023 14.5 0.0 2.5 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.6 gi|73669860|ref|YP_305875.1| - 0.0037 16.7 0.0 0.05 13.0 0.0 2.7 2 1 1 3 3 3 1 ATP-grasp domain Hydrolase_6 PF13344.6 gi|73669860|ref|YP_305875.1| - 0.028 14.5 0.5 11 6.2 0.0 5.0 6 0 0 6 6 6 0 Haloacid dehalogenase-like hydrolase Epimerase PF01370.21 gi|73669860|ref|YP_305875.1| - 0.033 13.7 0.0 0.19 11.2 0.0 2.3 2 1 1 3 3 3 0 NAD dependent epimerase/dehydratase family ATP-grasp_2 PF08442.10 gi|73669860|ref|YP_305875.1| - 0.048 13.2 0.0 3.7 7.1 0.0 2.9 3 0 0 3 3 3 0 ATP-grasp domain DUF768 PF05589.11 gi|73669860|ref|YP_305875.1| - 0.055 13.5 0.0 0.69 10.0 0.0 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF768) DUF433 PF04255.14 gi|73669860|ref|YP_305875.1| - 0.083 12.8 0.0 10 6.1 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF433) B12-binding PF02310.19 gi|73669860|ref|YP_305875.1| - 0.09 12.8 0.0 3.9 7.5 0.0 3.1 2 0 0 2 2 2 0 B12 binding domain CPSase_sm_chain PF00988.22 gi|73669861|ref|YP_305876.1| - 8.3e-49 164.7 0.0 1.3e-48 164.0 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|73669861|ref|YP_305876.1| - 6.3e-42 143.5 0.0 9.2e-42 143.0 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|73669861|ref|YP_305876.1| - 1.7e-07 31.2 0.2 0.023 14.5 0.0 2.4 1 1 1 2 2 2 2 Peptidase C26 Peptidase_S8 PF00082.22 gi|73669861|ref|YP_305876.1| - 0.066 12.5 0.0 5.3 6.2 0.0 2.1 2 0 0 2 2 2 0 Subtilase family ABC_tran PF00005.27 gi|73669862|ref|YP_305877.1| - 2.2e-35 122.2 0.1 5.3e-35 120.9 0.0 1.7 2 0 0 2 2 1 1 ABC transporter CBS PF00571.28 gi|73669862|ref|YP_305877.1| - 6.9e-14 52.0 0.6 8.1e-06 26.2 0.0 2.9 3 0 0 3 3 3 2 CBS domain ABC_ATPase PF09818.9 gi|73669862|ref|YP_305877.1| - 1e-06 27.9 0.2 0.084 11.7 0.0 3.0 3 0 0 3 3 3 2 Predicted ATPase of the ABC class AAA_21 PF13304.6 gi|73669862|ref|YP_305877.1| - 6.1e-06 26.3 0.1 0.013 15.3 0.0 2.5 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|73669862|ref|YP_305877.1| - 0.0005 19.8 0.0 0.002 17.8 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|73669862|ref|YP_305877.1| - 0.00051 20.6 1.8 0.0039 17.7 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|73669862|ref|YP_305877.1| - 0.00095 19.6 0.0 0.0024 18.3 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73669862|ref|YP_305877.1| - 0.0011 18.9 0.1 0.0025 17.8 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|73669862|ref|YP_305877.1| - 0.0012 19.1 0.1 0.0043 17.3 0.1 1.9 1 1 0 1 1 1 1 AAA domain APS_kinase PF01583.20 gi|73669862|ref|YP_305877.1| - 0.013 15.4 0.0 0.027 14.4 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_30 PF13604.6 gi|73669862|ref|YP_305877.1| - 0.018 14.8 0.0 0.041 13.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|73669862|ref|YP_305877.1| - 0.038 14.5 0.0 0.11 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|73669862|ref|YP_305877.1| - 0.062 13.3 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|73669862|ref|YP_305877.1| - 0.072 13.3 0.6 0.49 10.7 0.6 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit G-alpha PF00503.20 gi|73669862|ref|YP_305877.1| - 0.077 12.1 0.0 0.16 11.1 0.0 1.6 1 1 0 1 1 1 0 G-protein alpha subunit AAA_33 PF13671.6 gi|73669862|ref|YP_305877.1| - 0.11 12.6 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Herpes_Helicase PF02689.14 gi|73669862|ref|YP_305877.1| - 0.15 9.9 0.0 0.23 9.4 0.0 1.3 1 0 0 1 1 1 0 Helicase Adeno_IVa2 PF02456.15 gi|73669862|ref|YP_305877.1| - 0.17 10.7 0.0 0.26 10.0 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein Viral_helicase1 PF01443.18 gi|73669862|ref|YP_305877.1| - 0.41 10.3 1.3 1 9.0 0.0 2.2 3 0 0 3 3 3 0 Viral (Superfamily 1) RNA helicase BPD_transp_1 PF00528.22 gi|73669863|ref|YP_305878.1| - 1.8e-25 89.7 10.4 1.8e-25 89.7 10.4 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1304 PF06993.12 gi|73669863|ref|YP_305878.1| - 1.1 9.3 7.7 0.19 11.7 1.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) OpuAC PF04069.12 gi|73669864|ref|YP_305879.1| - 3.1e-68 230.1 0.9 4.4e-68 229.6 0.9 1.2 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system TPR_2 PF07719.17 gi|73669865|ref|YP_305880.1| - 3.4e-37 123.6 6.5 1.2e-07 31.3 0.0 7.1 5 1 2 7 7 7 6 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73669865|ref|YP_305880.1| - 1.6e-35 119.5 0.5 7.1e-08 32.0 0.0 7.2 6 1 1 7 7 7 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73669865|ref|YP_305880.1| - 8e-28 95.9 0.2 3.6e-08 32.9 0.0 7.3 5 2 2 7 7 7 6 TPR repeat TPR_8 PF13181.6 gi|73669865|ref|YP_305880.1| - 4.8e-27 91.9 2.6 3e-07 30.1 0.0 7.2 6 1 1 7 7 7 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73669865|ref|YP_305880.1| - 6.7e-21 74.7 0.2 1e-06 29.3 0.1 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73669865|ref|YP_305880.1| - 1.5e-19 69.0 4.2 0.0026 18.4 0.0 6.4 2 2 3 6 6 6 4 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73669865|ref|YP_305880.1| - 4.4e-19 68.6 2.6 0.0022 18.2 0.0 5.6 3 2 3 6 6 6 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73669865|ref|YP_305880.1| - 3.8e-18 65.7 2.3 0.0013 19.2 0.0 5.1 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73669865|ref|YP_305880.1| - 1.5e-17 63.5 0.0 6.4e-09 35.8 0.0 4.7 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73669865|ref|YP_305880.1| - 1.7e-13 49.6 0.4 0.24 11.5 0.0 6.4 5 1 1 6 6 6 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73669865|ref|YP_305880.1| - 2.9e-13 49.2 0.4 0.12 12.8 0.0 6.7 7 1 1 8 8 7 4 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73669865|ref|YP_305880.1| - 4.9e-12 45.3 3.0 0.017 15.0 0.1 5.8 6 0 0 6 6 6 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73669865|ref|YP_305880.1| - 7e-11 42.2 0.7 0.019 15.2 0.0 4.1 2 2 2 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 gi|73669865|ref|YP_305880.1| - 1.5e-08 34.5 1.5 0.022 14.8 0.0 4.6 5 0 0 5 5 5 2 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.6 gi|73669865|ref|YP_305880.1| - 3.3e-08 33.7 3.8 0.083 13.6 0.0 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_15 PF13429.6 gi|73669865|ref|YP_305880.1| - 9.2e-08 31.6 0.4 0.097 11.9 0.0 4.8 3 1 1 4 4 4 2 Tetratricopeptide repeat BTAD PF03704.17 gi|73669865|ref|YP_305880.1| - 4.8e-06 27.1 4.2 0.0001 22.8 2.1 2.2 2 0 0 2 2 2 1 Bacterial transcriptional activator domain TPR_21 PF09976.9 gi|73669865|ref|YP_305880.1| - 9.3e-06 25.5 0.4 0.083 12.6 0.5 3.8 2 2 1 3 3 3 1 Tetratricopeptide repeat-like domain SRP_TPR_like PF17004.5 gi|73669865|ref|YP_305880.1| - 3.4e-05 23.8 0.0 0.0051 16.8 0.0 3.0 2 1 1 3 3 3 1 Putative TPR-like repeat TPR_4 PF07721.14 gi|73669865|ref|YP_305880.1| - 3.6e-05 24.0 0.0 1.6 9.6 0.0 4.4 4 0 0 4 4 4 1 Tetratricopeptide repeat DUF3856 PF12968.7 gi|73669865|ref|YP_305880.1| - 8.2e-05 22.7 0.9 1.1 9.3 0.2 4.5 3 1 0 4 4 4 1 Domain of Unknown Function (DUF3856) NARP1 PF12569.8 gi|73669865|ref|YP_305880.1| - 0.00029 19.9 0.2 1.8 7.4 0.0 3.3 3 1 1 4 4 4 2 NMDA receptor-regulated protein 1 PPR PF01535.20 gi|73669865|ref|YP_305880.1| - 1 9.8 7.6 1.1e+02 3.3 0.0 5.1 5 1 1 6 6 5 0 PPR repeat Ank_2 PF12796.7 gi|73669866|ref|YP_305881.1| - 1e-60 202.3 6.4 6.6e-16 58.7 0.1 5.4 2 2 3 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 gi|73669866|ref|YP_305881.1| - 9e-59 195.1 5.6 9.2e-09 35.7 0.0 7.9 1 1 7 8 8 8 8 Ankyrin repeats (many copies) Ank PF00023.30 gi|73669866|ref|YP_305881.1| - 3.8e-56 185.2 3.9 2e-07 31.1 0.1 8.5 9 0 0 9 9 9 8 Ankyrin repeat Ank_5 PF13857.6 gi|73669866|ref|YP_305881.1| - 6e-50 166.7 15.8 7.6e-11 42.0 0.1 5.8 2 2 5 7 7 7 7 Ankyrin repeats (many copies) Ank_3 PF13606.6 gi|73669866|ref|YP_305881.1| - 1.1e-41 136.0 3.6 0.00033 20.9 0.0 9.0 9 0 0 9 9 9 8 Ankyrin repeat Mlp PF03304.13 gi|73669866|ref|YP_305881.1| - 0.029 14.6 0.3 0.092 13.0 0.3 1.8 1 0 0 1 1 1 0 Mlp lipoprotein family Shigella_OspC PF06128.11 gi|73669866|ref|YP_305881.1| - 0.037 13.8 4.4 0.29 10.8 0.2 3.5 1 1 3 5 5 5 0 Shigella flexneri OspC protein Yip1 PF04893.17 gi|73669868|ref|YP_305883.1| - 2.1e-30 105.7 16.5 2.7e-30 105.4 16.5 1.1 1 0 0 1 1 1 1 Yip1 domain DUF1282 PF06930.12 gi|73669868|ref|YP_305883.1| - 9.6e-05 22.2 13.8 0.00026 20.8 13.8 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) UPF0182 PF03699.13 gi|73669868|ref|YP_305883.1| - 3.3 5.7 9.1 4.1 5.4 9.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) MNHE PF01899.16 gi|73669868|ref|YP_305883.1| - 3.9 7.2 10.0 17 5.2 10.0 1.9 1 1 0 1 1 1 0 Na+/H+ ion antiporter subunit DUF11 PF01345.18 gi|73669869|ref|YP_305884.1| - 0.061 13.6 0.3 0.061 13.6 0.3 3.2 2 1 0 2 2 2 0 Domain of unknown function DUF11 Pilin_N PF07790.11 gi|73669869|ref|YP_305884.1| - 0.77 10.7 3.5 44 5.1 0.0 3.6 4 0 0 4 4 4 0 Archaeal Type IV pilin, N-terminal ABC_tran PF00005.27 gi|73669870|ref|YP_305885.1| - 1e-35 123.2 0.1 1.4e-35 122.8 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669870|ref|YP_305885.1| - 4.1e-09 36.7 2.3 4.1e-05 23.6 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73669870|ref|YP_305885.1| - 3.3e-06 26.7 0.6 4.8e-05 22.9 0.6 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73669870|ref|YP_305885.1| - 7.6e-05 22.4 0.4 0.00015 21.5 0.4 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|73669870|ref|YP_305885.1| - 0.00029 20.8 0.2 0.0028 17.6 0.1 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 gi|73669870|ref|YP_305885.1| - 0.0017 18.6 0.7 0.032 14.5 0.7 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|73669870|ref|YP_305885.1| - 0.034 13.9 1.8 0.07 12.8 1.7 1.6 1 1 1 2 2 2 0 AAA ATPase domain G-alpha PF00503.20 gi|73669870|ref|YP_305885.1| - 0.035 13.3 0.1 0.037 13.2 0.1 1.1 1 0 0 1 1 1 0 G-protein alpha subunit T2SSE PF00437.20 gi|73669870|ref|YP_305885.1| - 0.05 12.6 0.0 0.079 12.0 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_14 PF13173.6 gi|73669870|ref|YP_305885.1| - 0.056 13.5 0.0 0.085 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|73669870|ref|YP_305885.1| - 0.064 13.6 0.4 0.11 12.8 0.4 1.7 1 1 0 1 1 1 0 AAA ATPase domain FtsK_SpoIIIE PF01580.18 gi|73669870|ref|YP_305885.1| - 0.086 12.2 0.4 0.17 11.2 0.1 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family SbcCD_C PF13558.6 gi|73669870|ref|YP_305885.1| - 0.18 12.0 0.1 2.1 8.6 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 gi|73669870|ref|YP_305885.1| - 0.42 11.1 3.3 1.3 9.4 3.2 1.8 1 1 0 1 1 1 0 AAA domain MacB_PCD PF12704.7 gi|73669871|ref|YP_305886.1| - 2.7e-24 86.6 0.5 2.7e-24 86.6 0.5 2.2 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|73669871|ref|YP_305886.1| - 3.4e-13 49.9 6.4 3.4e-13 49.9 6.4 3.1 3 0 0 3 3 3 1 FtsX-like permease family DUF4064 PF13273.6 gi|73669871|ref|YP_305886.1| - 0.21 11.9 17.1 2.6 8.4 8.6 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF4064) LptF_LptG PF03739.14 gi|73669871|ref|YP_305886.1| - 0.68 8.7 9.2 0.52 9.1 7.2 1.8 2 0 0 2 2 2 0 Lipopolysaccharide export system permease LptF/LptG Aminotran_3 PF00202.21 gi|73669872|ref|YP_305887.1| - 1.2e-119 399.6 0.0 1.4e-119 399.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|73669872|ref|YP_305887.1| - 0.00048 19.4 0.0 0.00082 18.6 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II DUF4712 PF15830.5 gi|73669872|ref|YP_305887.1| - 0.062 13.0 0.0 0.13 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4712) Aldedh PF00171.22 gi|73669873|ref|YP_305888.1| - 5.3e-180 598.9 0.0 5.9e-180 598.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 gi|73669873|ref|YP_305888.1| - 0.084 12.3 0.0 0.53 9.7 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) Response_reg PF00072.24 gi|73669874|ref|YP_305889.1| - 2e-24 85.9 0.1 2.3e-24 85.7 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain DUF2795 PF11387.8 gi|73669874|ref|YP_305889.1| - 0.059 13.6 0.0 1.5 9.1 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2795) ThiG PF05690.14 gi|73669874|ref|YP_305889.1| - 0.078 12.3 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG GatB_N PF02934.15 gi|73669875|ref|YP_305890.1| - 2.1e-68 230.7 0.1 3.5e-68 229.9 0.1 1.4 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|73669875|ref|YP_305890.1| - 2.7e-19 69.5 0.2 8.2e-19 67.9 0.2 1.9 1 0 0 1 1 1 1 GatB domain GAD PF02938.14 gi|73669875|ref|YP_305890.1| - 3.3e-16 59.3 0.9 1.3e-15 57.3 0.3 2.3 2 0 0 2 2 2 1 GAD domain YqeY PF09424.10 gi|73669875|ref|YP_305890.1| - 2.2e-05 24.6 0.0 5.4e-05 23.3 0.0 1.7 1 0 0 1 1 1 1 Yqey-like protein CbiA PF01656.23 gi|73669876|ref|YP_305891.1| - 5e-14 52.4 0.0 1.2e-13 51.2 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|73669876|ref|YP_305891.1| - 2e-08 34.3 0.2 2.7e-06 27.4 0.0 2.4 2 1 0 2 2 2 1 AAA domain ParA PF10609.9 gi|73669876|ref|YP_305891.1| - 5.9e-08 32.5 0.3 1.9e-06 27.5 0.0 2.4 2 1 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|73669876|ref|YP_305891.1| - 1.7e-07 31.0 2.3 1.6e-05 24.5 0.0 2.4 2 1 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family APS_kinase PF01583.20 gi|73669876|ref|YP_305891.1| - 7.4e-07 29.2 0.1 1.8e-06 27.9 0.0 1.6 2 0 0 2 2 2 1 Adenylylsulphate kinase DUF87 PF01935.17 gi|73669876|ref|YP_305891.1| - 2.3e-06 27.9 1.4 1.4e-05 25.3 0.1 2.3 2 1 0 2 2 2 1 Helicase HerA, central domain MipZ PF09140.11 gi|73669876|ref|YP_305891.1| - 3.1e-06 26.7 0.1 4.8e-05 22.8 0.1 2.0 2 0 0 2 2 2 1 ATPase MipZ CBP_BcsQ PF06564.12 gi|73669876|ref|YP_305891.1| - 4.2e-06 26.4 0.0 0.00049 19.6 0.0 2.5 3 0 0 3 3 3 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|73669876|ref|YP_305891.1| - 5.8e-06 25.7 1.1 4.9e-05 22.6 0.6 2.2 2 1 0 2 2 2 1 Anion-transporting ATPase AAA_24 PF13479.6 gi|73669876|ref|YP_305891.1| - 8.1e-06 25.7 0.1 9.2e-05 22.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain CLP1_P PF16575.5 gi|73669876|ref|YP_305891.1| - 3.2e-05 23.8 0.3 0.00068 19.5 0.1 2.2 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop SRP54 PF00448.22 gi|73669876|ref|YP_305891.1| - 6.1e-05 22.7 0.1 0.0031 17.2 0.0 2.4 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain KTI12 PF08433.10 gi|73669876|ref|YP_305891.1| - 0.00012 21.6 0.2 0.00039 20.0 0.0 1.8 2 1 0 2 2 2 1 Chromatin associated protein KTI12 TrkA_N PF02254.18 gi|73669876|ref|YP_305891.1| - 0.00043 20.5 0.1 0.081 13.2 0.0 2.6 3 0 0 3 3 2 1 TrkA-N domain MMR_HSR1 PF01926.23 gi|73669876|ref|YP_305891.1| - 0.0012 18.9 0.0 0.56 10.3 0.0 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase IstB_IS21 PF01695.17 gi|73669876|ref|YP_305891.1| - 0.0013 18.5 0.2 0.0032 17.2 0.0 1.7 2 0 0 2 2 2 1 IstB-like ATP binding protein MeaB PF03308.16 gi|73669876|ref|YP_305891.1| - 0.0014 17.7 0.1 0.0037 16.3 0.0 1.6 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 gi|73669876|ref|YP_305891.1| - 0.0016 17.7 0.0 0.0027 17.0 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_18 PF13238.6 gi|73669876|ref|YP_305891.1| - 0.0023 18.5 0.0 0.0047 17.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.7 gi|73669876|ref|YP_305891.1| - 0.0024 16.9 0.1 0.014 14.4 0.0 2.0 2 0 0 2 2 2 1 AAA-like domain ABC_tran PF00005.27 gi|73669876|ref|YP_305891.1| - 0.0041 17.6 0.0 0.0078 16.7 0.0 1.6 1 0 0 1 1 1 1 ABC transporter cobW PF02492.19 gi|73669876|ref|YP_305891.1| - 0.012 15.2 1.2 0.86 9.2 0.1 2.6 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain GTP_EFTU PF00009.27 gi|73669876|ref|YP_305891.1| - 0.013 15.0 0.4 0.28 10.7 0.1 2.2 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain NTPase_1 PF03266.15 gi|73669876|ref|YP_305891.1| - 0.014 15.3 2.5 0.26 11.2 0.1 2.5 2 1 1 3 3 3 0 NTPase AAA_22 PF13401.6 gi|73669876|ref|YP_305891.1| - 0.016 15.5 0.0 0.048 13.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|73669876|ref|YP_305891.1| - 0.016 15.6 0.1 0.06 13.7 0.0 2.0 2 1 0 2 2 2 0 AAA ATPase domain Thymidylate_kin PF02223.17 gi|73669876|ref|YP_305891.1| - 0.02 14.6 0.1 0.074 12.7 0.0 2.0 2 1 0 2 2 2 0 Thymidylate kinase PglD_N PF17836.1 gi|73669876|ref|YP_305891.1| - 0.028 15.1 0.7 2 9.1 0.0 3.3 3 2 0 3 3 3 0 PglD N-terminal domain AAA_25 PF13481.6 gi|73669876|ref|YP_305891.1| - 0.028 14.0 0.1 0.13 11.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|73669876|ref|YP_305891.1| - 0.029 14.8 0.0 0.064 13.6 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_33 PF13671.6 gi|73669876|ref|YP_305891.1| - 0.032 14.4 0.0 0.052 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|73669876|ref|YP_305891.1| - 0.035 13.0 0.2 0.23 10.3 0.0 2.0 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain G-alpha PF00503.20 gi|73669876|ref|YP_305891.1| - 0.038 13.1 0.1 0.31 10.1 0.1 1.9 2 0 0 2 2 2 0 G-protein alpha subunit ATPase PF06745.13 gi|73669876|ref|YP_305891.1| - 0.04 13.3 0.1 0.11 11.9 0.0 1.7 2 0 0 2 2 2 0 KaiC CSN4_RPN5_eIF3a PF18420.1 gi|73669876|ref|YP_305891.1| - 0.041 14.0 0.2 0.2 11.9 0.0 2.1 2 0 0 2 2 2 0 CSN4/RPN5/eIF3a helix turn helix domain MobB PF03205.14 gi|73669876|ref|YP_305891.1| - 0.059 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_5 PF07728.14 gi|73669876|ref|YP_305891.1| - 0.064 13.3 0.1 0.34 10.9 0.0 2.1 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|73669876|ref|YP_305891.1| - 0.071 13.1 0.0 0.4 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 gi|73669876|ref|YP_305891.1| - 0.079 12.7 0.4 0.24 11.2 0.1 1.9 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein NB-ARC PF00931.22 gi|73669876|ref|YP_305891.1| - 0.11 11.6 0.1 0.2 10.8 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 gi|73669876|ref|YP_305891.1| - 0.28 10.9 1.4 0.67 9.7 1.4 1.7 1 1 0 1 1 1 0 P-loop containing region of AAA domain Methyltransf_31 PF13847.6 gi|73669877|ref|YP_305892.1| - 2.5e-15 56.6 0.0 3e-15 56.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73669877|ref|YP_305892.1| - 1e-11 44.6 0.0 1.6e-11 44.0 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 gi|73669877|ref|YP_305892.1| - 1.5e-11 44.9 0.0 2.4e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669877|ref|YP_305892.1| - 1.9e-11 44.5 0.0 3.6e-11 43.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|73669877|ref|YP_305892.1| - 3.3e-07 29.9 0.0 4.4e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB Fibrillarin PF01269.17 gi|73669877|ref|YP_305892.1| - 1.6e-05 24.1 0.0 2.3e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Fibrillarin Methyltr_RsmB-F PF01189.17 gi|73669877|ref|YP_305892.1| - 0.00014 21.5 0.0 0.00026 20.7 0.0 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_12 PF08242.12 gi|73669877|ref|YP_305892.1| - 0.00024 21.8 0.0 0.00047 20.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|73669877|ref|YP_305892.1| - 0.00031 20.6 0.0 0.00042 20.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 gi|73669877|ref|YP_305892.1| - 0.0027 17.2 0.0 0.0054 16.2 0.0 1.5 1 0 0 1 1 1 1 Putative methyltransferase FtsJ PF01728.19 gi|73669877|ref|YP_305892.1| - 0.0029 17.7 0.0 0.0039 17.3 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase CMAS PF02353.20 gi|73669877|ref|YP_305892.1| - 0.0059 15.9 0.0 0.0096 15.2 0.0 1.5 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_2 PF00891.18 gi|73669877|ref|YP_305892.1| - 0.075 12.3 0.0 0.098 11.9 0.0 1.4 1 1 0 1 1 1 0 O-methyltransferase domain DOT1 PF08123.13 gi|73669877|ref|YP_305892.1| - 0.079 12.5 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Histone methylation protein DOT1 RrnaAD PF00398.20 gi|73669877|ref|YP_305892.1| - 0.11 11.5 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase FecCD PF01032.18 gi|73669878|ref|YP_305893.1| - 1.6e-92 309.9 33.1 2e-92 309.6 33.1 1.1 1 0 0 1 1 1 1 FecCD transport family LapA_dom PF06305.11 gi|73669878|ref|YP_305893.1| - 0.0096 15.7 0.7 0.0096 15.7 0.7 4.6 4 1 1 5 5 5 1 Lipopolysaccharide assembly protein A domain ABC_tran PF00005.27 gi|73669879|ref|YP_305894.1| - 1e-28 100.6 0.0 2e-28 99.6 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|73669879|ref|YP_305894.1| - 5.7e-14 52.6 0.1 1.2e-08 35.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73669879|ref|YP_305894.1| - 1.1e-08 34.8 0.0 2.3e-06 27.2 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|73669879|ref|YP_305894.1| - 9.6e-05 22.3 0.0 0.12 12.1 0.0 2.5 3 0 0 3 3 3 2 AAA ATPase domain AAA_23 PF13476.6 gi|73669879|ref|YP_305894.1| - 0.00084 19.9 0.1 0.0014 19.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|73669879|ref|YP_305894.1| - 0.011 16.1 0.0 0.048 14.1 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|73669879|ref|YP_305894.1| - 0.021 14.5 0.0 0.047 13.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|73669879|ref|YP_305894.1| - 0.032 14.6 0.0 0.062 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 gi|73669879|ref|YP_305894.1| - 0.035 13.7 0.2 1.3 8.6 0.1 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF1192 PF06698.11 gi|73669879|ref|YP_305894.1| - 0.036 14.1 0.0 3.5 7.8 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) SbcCD_C PF13558.6 gi|73669879|ref|YP_305894.1| - 0.043 14.0 0.1 0.91 9.8 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 gi|73669879|ref|YP_305894.1| - 0.085 13.1 0.2 0.21 11.9 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|73669879|ref|YP_305894.1| - 0.086 12.4 0.0 0.54 9.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|73669879|ref|YP_305894.1| - 0.13 12.2 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea SRP54 PF00448.22 gi|73669879|ref|YP_305894.1| - 0.15 11.7 0.0 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Peripla_BP_2 PF01497.18 gi|73669880|ref|YP_305895.1| - 3e-23 82.6 0.0 4.7e-23 82.0 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_2 PF01497.18 gi|73669881|ref|YP_305896.1| - 2e-61 207.6 0.3 2.5e-61 207.3 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Glu_dehyd_C PF16912.5 gi|73669881|ref|YP_305896.1| - 0.095 12.2 0.0 3.5 7.0 0.0 2.2 2 0 0 2 2 2 0 Glucose dehydrogenase C-terminus ABC_tran PF00005.27 gi|73669882|ref|YP_305897.1| - 1.3e-31 109.9 0.0 2.2e-31 109.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669882|ref|YP_305897.1| - 1.2e-08 35.1 0.1 5.4e-05 23.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73669882|ref|YP_305897.1| - 2.9e-08 33.4 0.1 8.4e-07 28.6 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|73669882|ref|YP_305897.1| - 3.7e-06 27.6 0.0 4.5e-06 27.3 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|73669882|ref|YP_305897.1| - 2.8e-05 24.4 0.7 0.3 11.3 0.0 2.1 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|73669882|ref|YP_305897.1| - 3.5e-05 23.5 0.0 7e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|73669882|ref|YP_305897.1| - 0.00032 21.1 0.0 0.00091 19.6 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 gi|73669882|ref|YP_305897.1| - 0.0018 17.1 0.1 1.5 7.5 0.1 2.7 2 1 0 2 2 2 2 Predicted ATPase of the ABC class NB-ARC PF00931.22 gi|73669882|ref|YP_305897.1| - 0.0048 16.1 0.1 0.019 14.2 0.1 1.9 1 1 0 1 1 1 1 NB-ARC domain SbcCD_C PF13558.6 gi|73669882|ref|YP_305897.1| - 0.0076 16.5 0.1 0.043 14.1 0.1 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 gi|73669882|ref|YP_305897.1| - 0.0087 15.8 0.0 0.023 14.4 0.0 1.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_27 PF13514.6 gi|73669882|ref|YP_305897.1| - 0.014 15.0 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|73669882|ref|YP_305897.1| - 0.028 14.1 0.0 0.078 12.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain HSM3_N PF18795.1 gi|73669882|ref|YP_305897.1| - 0.034 13.6 0.2 0.047 13.1 0.2 1.2 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, N terminal domain Zeta_toxin PF06414.12 gi|73669882|ref|YP_305897.1| - 0.041 13.2 0.0 0.075 12.3 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin KAP_NTPase PF07693.14 gi|73669882|ref|YP_305897.1| - 0.042 13.1 0.0 0.59 9.3 0.0 2.0 1 1 1 2 2 2 0 KAP family P-loop domain AAA PF00004.29 gi|73669882|ref|YP_305897.1| - 0.054 13.9 0.1 0.33 11.4 0.1 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|73669882|ref|YP_305897.1| - 0.055 13.4 0.2 0.72 9.7 0.0 2.1 2 0 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 gi|73669882|ref|YP_305897.1| - 0.058 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase TniB PF05621.11 gi|73669882|ref|YP_305897.1| - 0.061 12.7 2.0 0.2 11.0 0.8 2.0 2 0 0 2 2 2 0 Bacterial TniB protein AAA_14 PF13173.6 gi|73669882|ref|YP_305897.1| - 0.069 13.2 0.0 1.9 8.5 0.0 2.3 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|73669882|ref|YP_305897.1| - 0.088 12.9 0.2 0.12 12.4 0.2 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|73669882|ref|YP_305897.1| - 0.11 12.7 0.1 0.2 11.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|73669882|ref|YP_305897.1| - 0.12 11.4 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 gi|73669882|ref|YP_305897.1| - 0.12 12.1 0.0 0.13 12.0 0.0 1.4 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|73669882|ref|YP_305897.1| - 0.13 12.2 0.4 9.1 6.1 0.0 2.1 2 0 0 2 2 2 0 Rad17 P-loop domain Adeno_IVa2 PF02456.15 gi|73669882|ref|YP_305897.1| - 0.16 10.8 0.1 0.24 10.2 0.1 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein FecCD PF01032.18 gi|73669883|ref|YP_305898.1| - 9.7e-92 307.3 31.5 1.2e-91 307.0 31.5 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|73669883|ref|YP_305898.1| - 2.7e-05 23.8 20.6 4.4e-05 23.1 20.6 1.4 1 0 0 1 1 1 1 ABC 3 transport family Methyltransf_2 PF00891.18 gi|73669884|ref|YP_305899.1| - 1.3e-17 63.8 0.0 1.9e-17 63.2 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Dimerisation2 PF16864.5 gi|73669884|ref|YP_305899.1| - 1.5e-12 47.3 0.0 3.1e-12 46.3 0.0 1.5 1 0 0 1 1 1 1 Dimerisation domain Methyltransf_12 PF08242.12 gi|73669884|ref|YP_305899.1| - 5e-06 27.2 0.0 9e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73669884|ref|YP_305899.1| - 0.00021 21.9 0.0 0.00048 20.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73669884|ref|YP_305899.1| - 0.00037 20.1 0.0 0.00081 19.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_16 PF10294.9 gi|73669884|ref|YP_305899.1| - 0.0014 18.4 0.0 0.0021 17.8 0.0 1.2 1 0 0 1 1 1 1 Lysine methyltransferase NAR PF16251.5 gi|73669884|ref|YP_305899.1| - 0.0028 18.3 0.0 0.029 15.1 0.0 2.2 1 1 1 2 2 2 1 Nucleic acid-binding domain (NAR) Methyltransf_31 PF13847.6 gi|73669884|ref|YP_305899.1| - 0.025 14.4 0.0 0.069 12.9 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain GidB PF02527.15 gi|73669884|ref|YP_305899.1| - 0.029 13.7 0.0 0.054 12.8 0.0 1.4 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G PrmA PF06325.13 gi|73669884|ref|YP_305899.1| - 0.042 13.2 0.0 0.07 12.5 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) HrcA_DNA-bdg PF03444.15 gi|73669884|ref|YP_305899.1| - 0.18 11.5 0.0 0.39 10.4 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CbiX PF01903.17 gi|73669885|ref|YP_305900.1| - 1.3e-27 96.2 0.0 1.5e-27 96.0 0.0 1.0 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|73669885|ref|YP_305900.1| - 2.1e-05 24.0 0.0 2.4e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|73669885|ref|YP_305900.1| - 0.043 12.9 0.0 0.054 12.6 0.0 1.1 1 0 0 1 1 1 0 Ferrochelatase BtpA PF03437.15 gi|73669885|ref|YP_305900.1| - 0.11 11.9 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 BtpA family CMD PF02627.20 gi|73669886|ref|YP_305901.1| - 1.2e-09 38.1 0.0 1.5e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family UbiA PF01040.18 gi|73669887|ref|YP_305902.1| - 0.0039 16.5 0.7 0.005 16.2 0.7 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Rab5ip PF07019.12 gi|73669888|ref|YP_305903.1| - 0.011 16.3 0.7 0.016 15.8 0.7 1.4 1 0 0 1 1 1 0 Rab5-interacting protein (Rab5ip) Met_10 PF02475.16 gi|73669891|ref|YP_305906.1| - 3.6e-66 222.7 0.0 4.8e-66 222.3 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|73669891|ref|YP_305906.1| - 3.8e-09 36.3 2.4 7.4e-09 35.4 0.1 2.5 3 0 0 3 3 3 1 tRNA methyltransferase 5 N-terminal domain Methyltransf_15 PF09445.10 gi|73669891|ref|YP_305906.1| - 1.2e-05 24.9 0.0 2.2e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TRM PF02005.16 gi|73669891|ref|YP_305906.1| - 8.3e-05 21.9 0.0 9.6e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_25 PF13649.6 gi|73669891|ref|YP_305906.1| - 8.4e-05 23.2 0.0 0.00028 21.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|73669891|ref|YP_305906.1| - 0.0012 18.4 0.0 0.0023 17.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|73669891|ref|YP_305906.1| - 0.0021 17.8 0.0 0.0064 16.3 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|73669891|ref|YP_305906.1| - 0.0072 16.3 0.0 0.015 15.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|73669891|ref|YP_305906.1| - 0.0093 15.4 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) GidB PF02527.15 gi|73669891|ref|YP_305906.1| - 0.015 14.6 0.0 0.023 14.0 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_4 PF02390.17 gi|73669891|ref|YP_305906.1| - 0.016 14.7 0.0 0.035 13.6 0.0 1.6 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_11 PF08241.12 gi|73669891|ref|YP_305906.1| - 0.044 14.4 0.0 0.11 13.2 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|73669891|ref|YP_305906.1| - 0.06 13.0 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical protein 95 N6_N4_Mtase PF01555.18 gi|73669891|ref|YP_305906.1| - 0.1 12.3 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 DNA methylase tRNA_U5-meth_tr PF05958.11 gi|73669891|ref|YP_305906.1| - 0.11 11.5 0.0 0.18 10.8 0.0 1.3 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase CRR7 PF12095.8 gi|73669891|ref|YP_305906.1| - 0.16 12.4 0.0 0.33 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 DUF3333 PF11812.8 gi|73669893|ref|YP_305908.1| - 0.18 12.0 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) Pentapeptide PF00805.22 gi|73669894|ref|YP_305909.1| - 2.9e-61 202.6 38.8 1.1e-15 56.9 1.3 6.7 3 2 2 7 7 7 5 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|73669894|ref|YP_305909.1| - 4.9e-28 97.1 0.0 6.4e-09 35.9 0.0 3.6 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|73669894|ref|YP_305909.1| - 4.6e-21 74.7 0.0 4.8e-05 23.4 0.0 5.4 2 2 2 4 4 4 4 Pentapeptide repeats (9 copies) DNA_ligase_OB PF03120.16 gi|73669894|ref|YP_305909.1| - 0.0058 16.5 1.0 22 5.0 0.1 4.7 1 1 2 3 3 3 1 NAD-dependent DNA ligase OB-fold domain NOD2_WH PF17779.1 gi|73669894|ref|YP_305909.1| - 0.069 13.5 0.1 46 4.4 0.0 3.7 3 1 1 4 4 4 0 NOD2 winged helix domain Topoisom_bac PF01131.20 gi|73669895|ref|YP_305910.1| - 3.2e-122 408.5 0.0 4.6e-122 408.0 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase zf-C4_Topoisom PF01396.19 gi|73669895|ref|YP_305910.1| - 3.6e-14 52.2 1.4 3.6e-14 52.2 1.4 2.4 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.22 gi|73669895|ref|YP_305910.1| - 9.9e-14 51.4 0.2 9.9e-14 51.4 0.2 2.5 3 0 0 3 3 3 1 Toprim domain HHH_5 PF14520.6 gi|73669895|ref|YP_305910.1| - 1.2e-07 32.3 1.8 1.1e-06 29.1 0.3 3.0 3 0 0 3 3 3 1 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|73669895|ref|YP_305910.1| - 0.00021 21.5 0.0 0.00058 20.1 0.0 1.7 2 0 0 2 2 1 1 Pathogenicity locus DUF4332 PF14229.6 gi|73669895|ref|YP_305910.1| - 0.00038 20.7 0.0 0.00083 19.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) BAF PF02961.14 gi|73669895|ref|YP_305910.1| - 0.0016 18.8 0.4 1 9.8 0.2 2.7 2 0 0 2 2 2 1 Barrier to autointegration factor HEXIM PF15313.6 gi|73669895|ref|YP_305910.1| - 0.0027 17.9 0.2 3.1 8.0 0.0 2.6 2 0 0 2 2 2 2 Hexamethylene bis-acetamide-inducible protein TfoX_C PF04994.13 gi|73669895|ref|YP_305910.1| - 0.014 15.5 0.0 0.036 14.1 0.0 1.7 1 0 0 1 1 1 0 TfoX C-terminal domain DNA_pol_lambd_f PF10391.9 gi|73669895|ref|YP_305910.1| - 0.017 14.9 0.0 0.047 13.5 0.0 1.7 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda Cas_TM1802 PF09484.10 gi|73669895|ref|YP_305910.1| - 0.084 11.6 0.0 0.15 10.8 0.0 1.3 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) DUF2283 PF10049.9 gi|73669895|ref|YP_305910.1| - 0.12 12.7 1.4 0.48 10.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2283) LUC7 PF03194.15 gi|73669895|ref|YP_305910.1| - 0.14 11.8 5.2 0.14 11.8 0.1 2.2 2 0 0 2 2 2 0 LUC7 N_terminus IMS_HHH PF11798.8 gi|73669895|ref|YP_305910.1| - 0.16 12.4 0.5 0.69 10.4 0.1 2.3 2 0 0 2 2 2 0 IMS family HHH motif LDcluster4 PF18306.1 gi|73669896|ref|YP_305911.1| - 1.5e-43 148.1 4.0 1.8e-43 147.8 4.0 1.1 1 0 0 1 1 1 1 SLOG cluster4 family DNA_processg_A PF02481.15 gi|73669896|ref|YP_305911.1| - 4.2e-07 29.4 2.9 8.7e-05 21.9 1.5 2.1 1 1 1 2 2 2 2 DNA recombination-mediator protein A Lysine_decarbox PF03641.14 gi|73669896|ref|YP_305911.1| - 0.00012 22.2 0.2 0.00012 22.2 0.2 1.8 2 0 0 2 2 2 1 Possible lysine decarboxylase LSDAT_prok PF18171.1 gi|73669896|ref|YP_305911.1| - 0.054 12.7 0.1 0.16 11.2 0.1 1.7 1 1 0 1 1 1 0 SLOG in TRPM, prokaryote Ribo_biogen_C PF04034.13 gi|73669897|ref|YP_305912.1| - 9e-47 158.0 0.0 1.1e-46 157.7 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|73669897|ref|YP_305912.1| - 1.2e-14 53.8 0.2 2.1e-14 53.1 0.2 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI DUF308 PF03729.13 gi|73669898|ref|YP_305913.1| - 2.4e-19 69.4 54.1 5.4e-11 42.6 18.0 3.1 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) Herpes_UL73 PF03554.13 gi|73669898|ref|YP_305913.1| - 0.22 11.5 2.6 1.2 9.2 0.1 2.5 1 1 1 2 2 2 0 UL73 viral envelope glycoprotein MFS_1 PF07690.16 gi|73669900|ref|YP_305915.1| - 9e-40 136.7 52.2 9e-40 136.7 52.2 2.7 2 1 0 2 2 2 1 Major Facilitator Superfamily MFS_3 PF05977.13 gi|73669900|ref|YP_305915.1| - 1.2e-09 37.2 24.8 2.1e-05 23.2 9.1 2.2 2 0 0 2 2 2 2 Transmembrane secretion effector HTH_5 PF01022.20 gi|73669901|ref|YP_305916.1| - 5.6e-06 26.1 0.2 1e-05 25.3 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|73669901|ref|YP_305916.1| - 0.00078 19.3 0.5 0.0014 18.5 0.4 1.5 1 1 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|73669901|ref|YP_305916.1| - 0.00088 19.1 0.4 0.0013 18.5 0.4 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|73669901|ref|YP_305916.1| - 0.0032 17.5 0.0 0.0046 17.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|73669901|ref|YP_305916.1| - 0.071 13.5 0.1 0.11 12.8 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator LPAM_1 PF08139.12 gi|73669901|ref|YP_305916.1| - 0.68 10.5 0.4 0.68 10.5 0.4 2.5 4 0 0 4 4 4 0 Prokaryotic membrane lipoprotein lipid attachment site Fumerase_C PF05683.12 gi|73669902|ref|YP_305917.1| - 9.4e-48 162.3 0.0 1.1e-47 162.1 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus Fumerase PF05681.14 gi|73669903|ref|YP_305918.1| - 1.7e-97 326.1 0.1 1.9e-97 325.9 0.1 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) TPR_1 PF00515.28 gi|73669904|ref|YP_305919.1| - 1e-13 50.4 0.2 9.3e-08 31.6 0.1 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73669904|ref|YP_305919.1| - 1.4e-12 46.7 0.2 9.1e-07 28.6 0.1 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73669904|ref|YP_305919.1| - 1.7e-12 46.4 0.1 1.9e-06 27.5 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73669904|ref|YP_305919.1| - 6.2e-10 39.2 0.3 7.4e-06 26.2 0.1 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73669904|ref|YP_305919.1| - 2.2e-07 30.4 0.2 0.00045 19.9 0.0 2.3 2 0 0 2 2 2 2 TPR repeat TPR_17 PF13431.6 gi|73669904|ref|YP_305919.1| - 3.1e-07 30.3 0.0 1.8e-05 24.8 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|73669904|ref|YP_305919.1| - 4.3e-06 26.7 0.4 0.091 12.8 0.0 2.4 2 0 0 2 2 2 2 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|73669904|ref|YP_305919.1| - 6.1e-06 25.9 0.0 0.086 12.7 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73669904|ref|YP_305919.1| - 0.00015 21.8 0.0 0.00023 21.2 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73669904|ref|YP_305919.1| - 0.00023 21.6 0.1 0.00079 19.9 0.1 1.8 1 1 0 1 1 1 1 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73669904|ref|YP_305919.1| - 0.0004 20.6 0.0 0.00059 20.0 0.0 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 gi|73669904|ref|YP_305919.1| - 0.00069 20.2 0.0 0.001 19.7 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73669904|ref|YP_305919.1| - 0.00073 20.2 0.0 0.021 15.6 0.0 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_21 PF09976.9 gi|73669904|ref|YP_305919.1| - 0.0062 16.3 0.0 0.0072 16.1 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat-like domain TPR_6 PF13174.6 gi|73669904|ref|YP_305919.1| - 0.007 16.9 0.0 1.6 9.5 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat FAT PF02259.23 gi|73669904|ref|YP_305919.1| - 0.034 13.4 0.0 0.039 13.2 0.0 1.1 1 0 0 1 1 1 0 FAT domain MIT PF04212.18 gi|73669904|ref|YP_305919.1| - 0.053 13.6 0.3 10 6.3 0.1 2.3 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain SRP_TPR_like PF17004.5 gi|73669904|ref|YP_305919.1| - 0.058 13.4 0.0 0.084 12.9 0.0 1.3 1 0 0 1 1 1 0 Putative TPR-like repeat TPR_3 PF07720.12 gi|73669904|ref|YP_305919.1| - 0.08 13.0 0.1 9.9 6.3 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat HEAT_2 PF13646.6 gi|73669905|ref|YP_305920.1| - 1e-51 173.3 17.0 1.5e-10 41.3 0.3 6.1 2 1 7 9 9 8 8 HEAT repeats HEAT PF02985.22 gi|73669905|ref|YP_305920.1| - 9.2e-27 90.8 7.3 0.016 15.4 0.0 12.0 12 0 0 12 12 12 5 HEAT repeat Adaptin_N PF01602.20 gi|73669905|ref|YP_305920.1| - 3.3e-18 65.5 5.4 5.1e-10 38.5 0.0 4.8 2 1 2 5 5 5 4 Adaptin N terminal region Cnd1 PF12717.7 gi|73669905|ref|YP_305920.1| - 8.4e-13 48.7 3.1 0.021 14.9 0.0 6.4 2 1 2 6 6 6 5 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 gi|73669905|ref|YP_305920.1| - 1.9e-08 34.7 16.9 0.58 10.7 0.0 9.7 13 0 0 13 13 12 2 HEAT-like repeat Vac14_Fab1_bd PF12755.7 gi|73669905|ref|YP_305920.1| - 3.8e-08 33.8 6.0 1.3 9.7 0.1 7.1 5 2 3 8 8 6 2 Vacuolar 14 Fab1-binding region V-ATPase_H_C PF11698.8 gi|73669905|ref|YP_305920.1| - 2.2e-05 24.6 1.4 4.3 7.5 0.0 7.1 4 3 4 8 8 8 1 V-ATPase subunit H V-ATPase_H_N PF03224.14 gi|73669905|ref|YP_305920.1| - 0.0003 20.2 5.5 1.6 7.9 0.1 4.7 2 2 2 4 4 4 2 V-ATPase subunit H Arm PF00514.23 gi|73669905|ref|YP_305920.1| - 0.00065 19.7 2.5 1.9 8.7 0.0 5.7 7 0 0 7 7 7 1 Armadillo/beta-catenin-like repeat DNA_alkylation PF08713.11 gi|73669905|ref|YP_305920.1| - 0.00099 18.9 11.1 0.14 11.8 0.9 4.2 2 2 2 4 4 4 2 DNA alkylation repair enzyme bMG1 PF17970.1 gi|73669905|ref|YP_305920.1| - 0.0063 16.6 5.0 21 5.2 0.0 6.3 3 2 4 8 8 8 0 Bacterial Alpha-2-macroglobulin MG1 domain CLASP_N PF12348.8 gi|73669905|ref|YP_305920.1| - 0.012 15.2 0.6 2 7.9 0.0 3.9 3 1 2 5 5 5 0 CLASP N terminal Lge1 PF11488.8 gi|73669905|ref|YP_305920.1| - 0.031 14.4 3.5 0.79 9.9 0.1 3.4 3 0 0 3 3 3 0 Transcriptional regulatory protein LGE1 RNA_binding PF01877.17 gi|73669905|ref|YP_305920.1| - 0.085 13.1 12.9 4.8 7.5 0.1 7.3 5 3 2 9 9 9 0 RNA binding TetR_C_30 PF17939.1 gi|73669905|ref|YP_305920.1| - 0.13 12.4 0.6 55 4.0 0.0 4.6 4 1 1 5 5 5 0 Tetracyclin repressor-like, C-terminal domain STAT_int PF02865.17 gi|73669905|ref|YP_305920.1| - 0.69 10.4 3.5 2.9 8.4 0.1 3.3 3 1 0 3 3 2 0 STAT protein, protein interaction domain DUF1542 PF07564.11 gi|73669905|ref|YP_305920.1| - 9 6.5 8.8 1.3 9.2 1.1 3.7 3 0 0 3 3 3 0 Domain of Unknown Function (DUF1542) FeS_assembly_P PF01883.19 gi|73669906|ref|YP_305921.1| - 3e-18 65.7 0.7 6.1e-18 64.8 0.7 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein Hexapep PF00132.24 gi|73669906|ref|YP_305921.1| - 2.3e-14 52.5 10.4 2.4e-08 33.4 3.2 3.2 2 1 1 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73669906|ref|YP_305921.1| - 4.1e-08 32.8 11.7 5.2e-05 22.9 3.5 2.7 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase SATase_N PF06426.14 gi|73669906|ref|YP_305921.1| - 0.0048 17.3 0.0 0.011 16.2 0.0 1.5 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal PALP PF00291.25 gi|73669907|ref|YP_305922.1| - 1e-72 245.1 2.6 1.1e-72 244.9 2.6 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ADH_zinc_N PF00107.26 gi|73669907|ref|YP_305922.1| - 0.0022 17.9 1.5 0.022 14.7 0.5 2.7 2 1 0 2 2 2 1 Zinc-binding dehydrogenase Pribosyltran PF00156.27 gi|73669907|ref|YP_305922.1| - 0.044 13.3 0.2 0.12 11.9 0.0 1.8 2 0 0 2 2 2 0 Phosphoribosyl transferase domain PaREP1 PF05942.11 gi|73669908|ref|YP_305923.1| - 0.00082 19.3 0.1 0.0013 18.6 0.1 1.4 1 1 0 1 1 1 1 Archaeal PaREP1/PaREP8 family P22_Cro PF14549.6 gi|73669908|ref|YP_305923.1| - 0.0013 18.5 0.1 0.0037 17.1 0.0 1.8 1 1 1 2 2 2 1 DNA-binding transcriptional regulator Cro YdaS_antitoxin PF15943.5 gi|73669908|ref|YP_305923.1| - 0.0017 18.2 0.0 0.0034 17.2 0.0 1.6 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_23 PF13384.6 gi|73669908|ref|YP_305923.1| - 0.0028 17.4 0.0 0.0052 16.5 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_3 PF01381.22 gi|73669908|ref|YP_305923.1| - 0.0036 17.3 0.2 0.0036 17.3 0.2 1.5 2 0 0 2 2 2 1 Helix-turn-helix HTH_28 PF13518.6 gi|73669908|ref|YP_305923.1| - 0.027 14.6 0.0 0.047 13.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Cro PF09048.10 gi|73669908|ref|YP_305923.1| - 0.033 14.2 0.2 0.069 13.2 0.2 1.5 1 0 0 1 1 1 0 Cro HTH_1 PF00126.27 gi|73669908|ref|YP_305923.1| - 0.038 14.0 0.4 0.088 12.8 0.4 1.6 1 1 1 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Tnp_ISL3 PF13542.6 gi|73669908|ref|YP_305923.1| - 0.095 12.1 0.0 0.18 11.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_29 PF13551.6 gi|73669908|ref|YP_305923.1| - 0.14 12.2 0.0 0.31 11.1 0.0 1.5 2 0 0 2 2 2 0 Winged helix-turn helix HTH_31 PF13560.6 gi|73669908|ref|YP_305923.1| - 0.18 12.2 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Aminotran_5 PF00266.19 gi|73669909|ref|YP_305924.1| - 7.2e-88 295.0 0.1 8.7e-88 294.8 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|73669909|ref|YP_305924.1| - 5.3e-06 25.9 0.1 1.2e-05 24.7 0.1 1.5 1 1 1 2 2 2 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|73669909|ref|YP_305924.1| - 0.00016 21.1 0.1 0.00026 20.4 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family NifU_N PF01592.16 gi|73669910|ref|YP_305925.1| - 3.2e-51 172.8 0.2 3.5e-51 172.7 0.2 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain CO_deh_flav_C PF03450.17 gi|73669910|ref|YP_305925.1| - 0.023 14.9 0.1 0.031 14.4 0.1 1.2 1 0 0 1 1 1 0 CO dehydrogenase flavoprotein C-terminal domain Phos_pyr_kin PF08543.12 gi|73669910|ref|YP_305925.1| - 0.066 12.6 0.3 0.25 10.7 0.1 1.8 1 1 1 2 2 2 0 Phosphomethylpyrimidine kinase Cys_Met_Meta_PP PF01053.20 gi|73669911|ref|YP_305926.1| - 4.4e-144 479.7 0.0 5.1e-144 479.5 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|73669911|ref|YP_305926.1| - 1.6e-09 37.5 0.0 2.4e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|73669911|ref|YP_305926.1| - 1.7e-07 30.8 0.0 3.4e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|73669911|ref|YP_305926.1| - 9.2e-06 24.8 0.0 1.4e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|73669911|ref|YP_305926.1| - 0.0019 17.5 0.0 0.0036 16.6 0.0 1.5 1 0 0 1 1 1 1 Beta-eliminating lyase Met_gamma_lyase PF06838.11 gi|73669911|ref|YP_305926.1| - 0.03 12.9 0.4 3.4 6.1 0.0 2.2 2 0 0 2 2 2 0 Methionine gamma-lyase Abhydrolase_1 PF00561.20 gi|73669912|ref|YP_305927.1| - 7e-38 130.7 0.1 2e-37 129.3 0.1 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold CBS PF00571.28 gi|73669912|ref|YP_305927.1| - 1.2e-22 80.1 1.0 7.4e-13 48.7 0.0 2.5 2 0 0 2 2 2 2 CBS domain Hydrolase_4 PF12146.8 gi|73669912|ref|YP_305927.1| - 0.0045 16.3 0.1 0.01 15.1 0.1 1.5 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Apt1 PF10351.9 gi|73669912|ref|YP_305927.1| - 0.012 14.5 8.8 0.016 14.1 8.8 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Esterase PF00756.20 gi|73669912|ref|YP_305927.1| - 0.021 14.4 3.1 0.035 13.7 3.1 1.4 1 1 0 1 1 1 0 Putative esterase ANAPC1 PF12859.7 gi|73669912|ref|YP_305927.1| - 2.9 8.5 10.0 6.2 7.4 10.0 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 SpoIIIAH PF12685.7 gi|73669912|ref|YP_305927.1| - 5.1 6.9 14.2 0.48 10.2 9.6 1.6 2 0 0 2 2 2 0 SpoIIIAH-like protein RIFIN PF02009.16 gi|73669912|ref|YP_305927.1| - 6.7 6.5 7.0 1.1 9.1 2.6 1.8 2 0 0 2 2 2 0 Rifin DUF3408 PF11888.8 gi|73669912|ref|YP_305927.1| - 7.9 6.6 8.9 14 5.9 8.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) Zn-ribbon_8 PF09723.10 gi|73669913|ref|YP_305928.1| - 0.0077 16.3 2.8 1.9 8.7 1.0 2.3 2 0 0 2 2 2 2 Zinc ribbon domain TackOD1 PF18551.1 gi|73669913|ref|YP_305928.1| - 0.015 15.0 1.5 0.022 14.4 1.5 1.3 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 YdjO PF14169.6 gi|73669913|ref|YP_305928.1| - 0.021 14.5 2.9 0.025 14.3 0.0 2.0 2 0 0 2 2 2 0 Cold-inducible protein YdjO Zn_Tnp_IS1595 PF12760.7 gi|73669913|ref|YP_305928.1| - 0.022 14.7 1.1 0.03 14.3 1.1 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|73669913|ref|YP_305928.1| - 0.36 10.4 5.8 4.1 7.0 1.4 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding zf-ISL3 PF14690.6 gi|73669913|ref|YP_305928.1| - 1.7 9.4 7.0 8.9 7.1 0.3 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf_UBZ PF18439.1 gi|73669913|ref|YP_305928.1| - 2.5 7.8 4.2 25 4.6 1.5 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Glutaredoxin PF00462.24 gi|73669914|ref|YP_305929.1| - 1.9e-13 50.4 0.0 3.2e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_3 PF13192.6 gi|73669914|ref|YP_305929.1| - 0.0052 16.8 0.1 0.019 15.0 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin domain GST_N_3 PF13417.6 gi|73669914|ref|YP_305929.1| - 0.0078 16.6 0.0 0.01 16.2 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 gi|73669914|ref|YP_305929.1| - 0.19 12.1 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain FeThRed_B PF02943.15 gi|73669915|ref|YP_305930.1| - 3.1e-23 81.8 0.4 5e-23 81.1 0.4 1.4 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain RecR PF02132.15 gi|73669915|ref|YP_305930.1| - 0.0062 16.1 0.9 0.014 14.9 0.9 1.6 1 0 0 1 1 1 1 RecR protein zf-MIZ PF02891.20 gi|73669915|ref|YP_305930.1| - 0.072 12.9 4.3 16 5.3 0.1 3.4 3 0 0 3 3 3 0 MIZ/SP-RING zinc finger HypA PF01155.19 gi|73669915|ref|YP_305930.1| - 0.36 10.9 4.4 0.093 12.8 1.1 1.6 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubredoxin PF00301.20 gi|73669915|ref|YP_305930.1| - 4.6 7.4 12.4 1.8 8.7 0.5 3.2 3 0 0 3 3 3 0 Rubredoxin DDE_Tnp_1 PF01609.21 gi|73669916|ref|YP_305931.1| - 3.9e-20 72.4 1.0 4.8e-20 72.1 1.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73669916|ref|YP_305931.1| - 0.039 13.6 0.1 3 7.5 0.0 2.3 2 0 0 2 2 2 0 DDE superfamily endonuclease DUF2156 PF09924.9 gi|73669918|ref|YP_305933.1| - 2e-89 299.5 0.1 2.8e-89 299.1 0.1 1.2 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2156) LPG_synthase_TM PF03706.13 gi|73669918|ref|YP_305933.1| - 2.2e-13 50.4 23.4 2.2e-13 50.4 23.4 2.7 2 1 0 2 2 2 1 Lysylphosphatidylglycerol synthase TM region GLTT PF01744.20 gi|73669919|ref|YP_305934.1| - 0.077 12.8 2.1 0.16 11.8 2.1 1.5 1 0 0 1 1 1 0 GLTT repeat (6 copies) BatD PF13584.6 gi|73669920|ref|YP_305935.1| - 0.023 13.5 0.1 0.042 12.7 0.0 1.4 2 0 0 2 2 2 0 Oxygen tolerance DUF4295 PF14128.6 gi|73669922|ref|YP_305937.1| - 0.027 14.3 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4295) BatD PF13584.6 gi|73669929|ref|YP_305944.1| - 0.025 13.4 0.2 0.043 12.6 0.0 1.4 2 0 0 2 2 2 0 Oxygen tolerance COR PF16095.5 gi|73669930|ref|YP_305945.1| - 2.4e-56 190.7 2.6 4.3e-56 189.8 2.6 1.4 1 0 0 1 1 1 1 C-terminal of Roc, COR, domain Roc PF08477.13 gi|73669930|ref|YP_305945.1| - 1.6e-29 102.5 0.1 3.2e-29 101.6 0.1 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase LRR_4 PF12799.7 gi|73669930|ref|YP_305945.1| - 6.1e-25 86.9 42.8 6.6e-07 29.5 0.5 6.9 6 1 1 7 7 6 5 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 gi|73669930|ref|YP_305945.1| - 2.5e-24 84.8 27.1 9.4e-11 41.3 3.1 4.6 1 1 2 4 4 4 4 Leucine rich repeat Ras PF00071.22 gi|73669930|ref|YP_305945.1| - 8.7e-19 67.7 0.1 2e-18 66.5 0.1 1.6 1 0 0 1 1 1 1 Ras family LRR_1 PF00560.33 gi|73669930|ref|YP_305945.1| - 7.2e-10 38.0 31.8 0.043 14.4 0.3 9.6 9 0 0 9 9 8 3 Leucine Rich Repeat Arf PF00025.21 gi|73669930|ref|YP_305945.1| - 1.4e-07 31.1 0.3 3.1e-07 30.0 0.3 1.5 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 gi|73669930|ref|YP_305945.1| - 0.00026 20.4 0.0 0.00058 19.3 0.0 1.6 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Baculo_PEP_C PF04513.12 gi|73669930|ref|YP_305945.1| - 0.00068 19.7 0.4 0.00068 19.7 0.4 2.7 4 0 0 4 4 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus MMR_HSR1 PF01926.23 gi|73669930|ref|YP_305945.1| - 0.0059 16.7 0.0 0.015 15.4 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase COG2 PF06148.11 gi|73669930|ref|YP_305945.1| - 0.0075 16.4 0.1 0.039 14.0 0.2 2.2 2 0 0 2 2 1 1 COG (conserved oligomeric Golgi) complex component, COG2 SRPRB PF09439.10 gi|73669930|ref|YP_305945.1| - 0.0097 15.3 0.0 0.028 13.9 0.0 1.8 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit DUF1640 PF07798.11 gi|73669930|ref|YP_305945.1| - 0.021 14.9 1.0 0.021 14.9 1.0 1.8 2 0 0 2 2 1 0 Protein of unknown function (DUF1640) ACT_4 PF13291.6 gi|73669930|ref|YP_305945.1| - 0.029 15.0 0.1 0.1 13.2 0.1 1.9 1 0 0 1 1 1 0 ACT domain Mst1_SARAH PF11629.8 gi|73669930|ref|YP_305945.1| - 0.095 12.8 2.3 0.28 11.3 0.8 2.7 2 0 0 2 2 2 0 C terminal SARAH domain of Mst1 TolA_bind_tri PF16331.5 gi|73669930|ref|YP_305945.1| - 0.17 12.0 1.6 0.75 9.9 0.2 2.8 3 0 0 3 3 2 0 TolA binding protein trimerisation UPF0242 PF06785.11 gi|73669930|ref|YP_305945.1| - 0.29 11.2 6.5 0.045 13.8 1.9 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus FlaC_arch PF05377.11 gi|73669930|ref|YP_305945.1| - 1.4 9.4 5.4 14 6.2 2.4 4.0 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) LRR_6 PF13516.6 gi|73669930|ref|YP_305945.1| - 2.6 8.3 30.3 8 6.8 0.2 7.1 7 0 0 7 7 7 0 Leucine Rich repeat TrmB PF01978.19 gi|73669931|ref|YP_305946.1| - 0.014 15.2 0.1 0.43 10.5 0.0 2.5 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF2551 PF10826.8 gi|73669932|ref|YP_305947.1| - 6.7e-34 116.0 0.8 8e-34 115.7 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) Penicillinase_R PF03965.16 gi|73669932|ref|YP_305947.1| - 0.00053 20.3 0.1 0.00071 19.9 0.1 1.2 1 0 0 1 1 1 1 Penicillinase repressor DUF2180 PF09947.9 gi|73669933|ref|YP_305948.1| - 4.6e-33 113.0 7.0 5.3e-33 112.8 7.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) DZR PF12773.7 gi|73669933|ref|YP_305948.1| - 0.00092 19.2 5.5 0.0055 16.7 5.5 1.9 1 1 0 1 1 1 1 Double zinc ribbon zf-UBP_var PF17807.1 gi|73669933|ref|YP_305948.1| - 0.034 13.9 0.3 0.034 13.9 0.3 1.8 2 0 0 2 2 2 0 Variant UBP zinc finger zinc_ribbon_9 PF14369.6 gi|73669933|ref|YP_305948.1| - 0.049 13.9 4.0 1.3 9.3 1.5 2.7 2 1 0 2 2 2 0 zinc-ribbon Tnp_zf-ribbon_2 PF13842.6 gi|73669933|ref|YP_305948.1| - 0.083 13.7 1.7 0.083 13.7 1.7 2.2 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon DUF2180 PF09947.9 gi|73669934|ref|YP_305949.1| - 9.3e-28 96.0 6.1 1.1e-27 95.8 6.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) Tnp_zf-ribbon_2 PF13842.6 gi|73669934|ref|YP_305949.1| - 0.0046 17.7 2.9 0.085 13.7 0.9 2.1 2 0 0 2 2 2 1 DDE_Tnp_1-like zinc-ribbon zf-UBP_var PF17807.1 gi|73669934|ref|YP_305949.1| - 0.057 13.2 1.0 0.092 12.5 1.0 1.3 1 0 0 1 1 1 0 Variant UBP zinc finger FYVE PF01363.21 gi|73669934|ref|YP_305949.1| - 0.068 13.3 1.9 0.12 12.5 1.9 1.5 1 1 0 1 1 1 0 FYVE zinc finger CMD PF02627.20 gi|73669935|ref|YP_305950.1| - 1.9e-17 63.1 0.6 2.4e-17 62.8 0.6 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family UBA_2 PF08587.11 gi|73669935|ref|YP_305950.1| - 0.05 13.7 0.0 8 6.7 0.0 2.3 2 0 0 2 2 2 0 Ubiquitin associated domain (UBA) Oxidored_q6 PF01058.22 gi|73669936|ref|YP_305951.1| - 3.6e-26 91.5 4.4 4.7e-26 91.2 4.4 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Peptidase_M6 PF05547.11 gi|73669937|ref|YP_305952.1| - 0.00026 19.5 2.4 0.15 10.3 0.4 2.9 3 0 0 3 3 3 2 Immune inhibitor A peptidase M6 Fer4_2 PF12797.7 gi|73669938|ref|YP_305953.1| - 8.4e-09 35.0 12.3 0.00032 20.6 2.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|73669938|ref|YP_305953.1| - 1.7e-08 33.9 16.9 0.00032 20.4 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73669938|ref|YP_305953.1| - 1.2e-07 31.4 15.9 0.00012 22.0 2.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73669938|ref|YP_305953.1| - 1.6e-07 31.4 14.4 1.7e-07 31.2 14.4 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73669938|ref|YP_305953.1| - 2.4e-06 28.0 12.3 0.0067 17.0 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73669938|ref|YP_305953.1| - 5e-06 26.6 12.3 8.1e-06 25.9 12.4 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73669938|ref|YP_305953.1| - 3.7e-05 24.6 12.4 0.015 16.2 2.9 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|73669938|ref|YP_305953.1| - 5.9e-05 23.1 14.5 0.0001 22.3 14.5 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73669938|ref|YP_305953.1| - 0.0038 17.6 12.8 0.091 13.2 3.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73669938|ref|YP_305953.1| - 0.0043 17.5 20.3 0.07 13.7 4.5 2.5 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73669938|ref|YP_305953.1| - 0.0093 16.5 14.7 0.14 12.7 4.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73669938|ref|YP_305953.1| - 1.2 9.7 15.5 3.9 8.1 1.6 2.4 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|73669938|ref|YP_305953.1| - 6 7.8 16.8 1.5 9.7 5.2 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Methyltransf_25 PF13649.6 gi|73669940|ref|YP_305955.1| - 2.2e-17 63.6 0.0 4.1e-17 62.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73669940|ref|YP_305955.1| - 2.1e-13 50.7 0.0 3.5e-13 50.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669940|ref|YP_305955.1| - 6e-13 48.9 0.0 7e-13 48.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73669940|ref|YP_305955.1| - 9.4e-10 38.6 0.0 2e-09 37.5 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73669940|ref|YP_305955.1| - 3.3e-09 37.4 0.1 1.3e-08 35.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain CMAS PF02353.20 gi|73669940|ref|YP_305955.1| - 6.8e-09 35.4 0.0 1.2e-08 34.6 0.0 1.4 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|73669940|ref|YP_305955.1| - 6e-07 29.2 0.0 3.6e-06 26.6 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase small domain NodS PF05401.11 gi|73669940|ref|YP_305955.1| - 3.9e-06 26.6 0.0 5.8e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) TehB PF03848.14 gi|73669940|ref|YP_305955.1| - 2.3e-05 23.9 0.0 3.3e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Ubie_methyltran PF01209.18 gi|73669940|ref|YP_305955.1| - 2.6e-05 23.7 0.0 3.8e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.6 gi|73669940|ref|YP_305955.1| - 0.0017 18.3 0.0 0.0026 17.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|73669940|ref|YP_305955.1| - 0.002 18.2 0.0 0.0037 17.4 0.0 1.6 1 1 0 1 1 1 1 FtsJ-like methyltransferase TPMT PF05724.11 gi|73669940|ref|YP_305955.1| - 0.0029 17.3 0.0 0.0093 15.6 0.0 1.7 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_2 PF00891.18 gi|73669940|ref|YP_305955.1| - 0.005 16.1 0.0 0.011 15.0 0.0 1.6 2 0 0 2 2 2 1 O-methyltransferase domain PrmA PF06325.13 gi|73669940|ref|YP_305955.1| - 0.0053 16.2 0.0 0.0097 15.3 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.20 gi|73669940|ref|YP_305955.1| - 0.017 14.2 0.0 0.023 13.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase NNMT_PNMT_TEMT PF01234.17 gi|73669940|ref|YP_305955.1| - 0.024 13.8 0.0 0.17 11.0 0.0 2.2 2 1 0 2 2 2 0 NNMT/PNMT/TEMT family AdoMet_MTase PF07757.13 gi|73669940|ref|YP_305955.1| - 0.029 14.7 0.0 0.061 13.7 0.0 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase MetW PF07021.12 gi|73669940|ref|YP_305955.1| - 0.11 12.0 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW tRNA_U5-meth_tr PF05958.11 gi|73669940|ref|YP_305955.1| - 0.13 11.2 0.0 0.27 10.2 0.0 1.5 2 0 0 2 2 2 0 tRNA (Uracil-5-)-methyltransferase TPR_1 PF00515.28 gi|73669941|ref|YP_305956.1| - 1.1e-48 161.1 15.6 5.1e-09 35.6 0.1 8.3 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73669941|ref|YP_305956.1| - 3.5e-42 139.1 16.2 2.5e-08 33.4 0.1 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73669941|ref|YP_305956.1| - 9.3e-37 122.8 6.3 0.00013 22.1 0.1 8.2 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73669941|ref|YP_305956.1| - 7e-34 115.2 19.7 5.1e-10 38.9 0.3 7.5 5 2 3 8 8 8 7 TPR repeat TPR_8 PF13181.6 gi|73669941|ref|YP_305956.1| - 5.7e-31 104.1 12.3 6.1e-08 32.3 0.0 8.0 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73669941|ref|YP_305956.1| - 2.3e-30 104.9 8.3 1.7e-11 44.5 1.1 4.5 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73669941|ref|YP_305956.1| - 1.1e-29 100.5 12.4 2.5e-05 24.7 0.1 7.9 1 1 7 8 8 8 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73669941|ref|YP_305956.1| - 3e-25 88.1 0.6 8.6e-06 25.8 0.0 5.0 2 2 3 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73669941|ref|YP_305956.1| - 1.9e-22 79.5 12.7 2.2e-05 24.9 0.1 5.3 3 2 3 6 6 6 6 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73669941|ref|YP_305956.1| - 1.6e-18 66.7 4.2 6.3e-06 26.3 0.0 3.2 2 1 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 gi|73669941|ref|YP_305956.1| - 1.2e-16 60.8 9.9 2.6e-05 24.4 0.1 6.1 2 1 3 5 5 5 4 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|73669941|ref|YP_305956.1| - 6.9e-11 42.0 9.1 0.035 14.2 0.1 7.0 6 2 2 8 8 8 2 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 gi|73669941|ref|YP_305956.1| - 9.9e-10 37.8 0.3 0.0057 16.6 0.1 5.9 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73669941|ref|YP_305956.1| - 3.1e-09 36.9 2.9 1.6 9.6 0.0 6.8 8 0 0 8 8 6 1 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|73669941|ref|YP_305956.1| - 1.7e-07 31.3 0.0 0.00028 20.9 0.0 3.2 1 1 1 3 3 3 1 Putative TPR-like repeat TPR_15 PF13429.6 gi|73669941|ref|YP_305956.1| - 1e-06 28.2 6.8 0.0025 17.1 2.0 3.6 1 1 3 4 4 4 2 Tetratricopeptide repeat NARP1 PF12569.8 gi|73669941|ref|YP_305956.1| - 5.7e-06 25.5 3.6 0.31 9.9 0.0 4.7 1 1 4 5 5 5 2 NMDA receptor-regulated protein 1 BTAD PF03704.17 gi|73669941|ref|YP_305956.1| - 4.8e-05 23.8 2.6 1.4 9.4 0.2 3.8 2 1 2 4 4 4 3 Bacterial transcriptional activator domain TPR_10 PF13374.6 gi|73669941|ref|YP_305956.1| - 5.3e-05 23.0 5.6 0.8 9.7 0.1 6.7 7 0 0 7 7 7 1 Tetratricopeptide repeat DUF3856 PF12968.7 gi|73669941|ref|YP_305956.1| - 0.00056 20.0 2.7 4.7 7.3 0.0 4.8 2 1 3 5 5 5 1 Domain of Unknown Function (DUF3856) TPR_20 PF14561.6 gi|73669941|ref|YP_305956.1| - 0.0014 18.9 8.0 2.9 8.3 0.1 4.6 4 1 1 5 5 5 1 Tetratricopeptide repeat TOM20_plant PF06552.12 gi|73669941|ref|YP_305956.1| - 0.0036 17.1 2.3 4 7.1 0.0 4.0 2 2 1 4 4 4 1 Plant specific mitochondrial import receptor subunit TOM20 TPR_21 PF09976.9 gi|73669941|ref|YP_305956.1| - 0.0043 16.8 4.0 0.23 11.2 0.4 3.5 1 1 2 3 3 3 1 Tetratricopeptide repeat-like domain ChAPs PF09295.10 gi|73669941|ref|YP_305956.1| - 0.023 13.7 0.3 2.7 6.9 0.0 2.8 1 1 2 3 3 3 0 ChAPs (Chs5p-Arf1p-binding proteins) TPR_4 PF07721.14 gi|73669941|ref|YP_305956.1| - 0.079 13.6 0.2 27 5.8 0.1 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_3 PF07720.12 gi|73669941|ref|YP_305956.1| - 0.1 12.6 0.0 0.33 11.0 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 gi|73669941|ref|YP_305956.1| - 2 8.5 5.6 2.4 8.3 0.2 3.6 3 1 1 4 4 4 0 MIT (microtubule interacting and transport) domain 7TMR-DISM_7TM PF07695.11 gi|73669943|ref|YP_305958.1| - 0.026 14.4 11.6 0.03 14.2 11.6 1.0 1 0 0 1 1 1 0 7TM diverse intracellular signalling DUF3290 PF11694.8 gi|73669944|ref|YP_305959.1| - 0.67 9.9 4.7 11 6.0 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) Nitroreductase PF00881.24 gi|73669945|ref|YP_305960.1| - 8.1e-35 120.4 0.0 1e-34 120.0 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|73669945|ref|YP_305960.1| - 1.1e-17 64.4 0.1 1.7e-06 27.8 0.0 3.1 1 1 1 3 3 3 3 Putative TM nitroreductase SBDS PF01172.18 gi|73669945|ref|YP_305960.1| - 0.0053 16.8 0.1 0.026 14.6 0.0 2.0 1 1 1 2 2 2 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein NAD_binding_2 PF03446.15 gi|73669946|ref|YP_305961.1| - 7.6e-07 29.4 0.1 7.9e-07 29.4 0.1 1.0 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 gi|73669946|ref|YP_305961.1| - 0.0045 17.0 0.0 0.0045 17.0 0.0 1.0 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase PrsW-protease PF13367.6 gi|73669947|ref|YP_305962.1| - 4.8e-27 94.7 9.9 4.8e-27 94.7 9.9 1.8 2 1 0 2 2 2 1 PrsW family intramembrane metalloprotease CPP1-like PF11833.8 gi|73669947|ref|YP_305962.1| - 2.5 7.7 7.9 0.57 9.8 3.7 2.0 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like 7TMR-DISM_7TM PF07695.11 gi|73669947|ref|YP_305962.1| - 9.1 6.1 18.7 0.079 12.8 9.0 2.2 1 1 0 2 2 2 0 7TM diverse intracellular signalling AnfO_nitrog PF09582.10 gi|73669949|ref|YP_305964.1| - 7.7e-58 195.0 0.1 9.3e-58 194.7 0.1 1.0 1 0 0 1 1 1 1 Iron only nitrogenase protein AnfO (AnfO_nitrog) Nitro_FeMo-Co PF02579.17 gi|73669949|ref|YP_305964.1| - 0.0039 17.5 0.0 0.0097 16.2 0.1 1.6 2 0 0 2 2 2 1 Dinitrogenase iron-molybdenum cofactor DUF2482 PF10655.9 gi|73669949|ref|YP_305964.1| - 0.022 15.3 1.0 0.058 13.9 0.4 2.0 1 1 1 2 2 2 0 Hypothetical protein of unknown function (DUF2482) DUF2769 PF10967.8 gi|73669950|ref|YP_305965.1| - 2.3e-08 34.6 5.9 2.8e-08 34.3 2.7 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2769) PAS_3 PF08447.12 gi|73669951|ref|YP_305966.1| - 4.3e-36 123.1 0.7 7.6e-17 61.4 0.0 2.2 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 gi|73669951|ref|YP_305966.1| - 4.7e-13 49.1 0.8 5.6e-06 26.3 0.1 2.3 2 1 0 2 2 2 2 PAS fold PAS_4 PF08448.10 gi|73669951|ref|YP_305966.1| - 3.9e-08 33.5 0.1 5.4e-06 26.6 0.0 2.4 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|73669951|ref|YP_305966.1| - 1.2e-07 32.0 0.4 0.016 15.4 0.1 2.4 2 0 0 2 2 2 2 PAS domain PAS_11 PF14598.6 gi|73669951|ref|YP_305966.1| - 0.0005 20.2 0.0 0.46 10.6 0.0 2.4 2 0 0 2 2 2 2 PAS domain MoaE PF02391.17 gi|73669951|ref|YP_305966.1| - 0.023 15.0 0.2 0.3 11.4 0.0 2.6 3 0 0 3 3 3 0 MoaE protein SCAB-Ig PF16709.5 gi|73669951|ref|YP_305966.1| - 0.025 14.6 0.0 6.5 6.9 0.0 2.4 2 0 0 2 2 2 0 Ig domain of plant-specific actin-binding protein DUF1460 PF07313.12 gi|73669951|ref|YP_305966.1| - 0.083 12.3 0.1 0.14 11.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1460) Cortex-I_coil PF09304.10 gi|73669951|ref|YP_305966.1| - 0.29 11.3 4.3 0.091 13.0 0.8 2.0 2 0 0 2 2 2 0 Cortexillin I, coiled coil Mltc_N PF11873.8 gi|73669952|ref|YP_305967.1| - 0.047 13.4 0.7 0.19 11.4 0.1 2.2 2 0 0 2 2 2 0 Membrane-bound lytic murein transglycosylase C, N-terminal domain Tubulin_2 PF13809.6 gi|73669953|ref|YP_305968.1| - 1.6e-13 50.6 0.0 2e-11 43.7 0.0 2.6 2 0 0 2 2 2 2 Tubulin like Tubulin PF00091.25 gi|73669953|ref|YP_305968.1| - 0.00014 22.1 0.1 0.0019 18.4 0.1 2.6 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Seryl_tRNA_N PF02403.22 gi|73669953|ref|YP_305968.1| - 0.03 14.6 21.7 0.038 14.2 0.7 4.8 3 1 1 4 4 4 0 Seryl-tRNA synthetase N-terminal domain Fez1 PF06818.15 gi|73669953|ref|YP_305968.1| - 0.089 13.2 19.6 1.3 9.4 0.1 4.0 3 1 0 3 3 3 0 Fez1 ATPase_2 PF01637.18 gi|73669954|ref|YP_305969.1| - 0.0014 18.6 0.6 0.0083 16.1 0.4 2.1 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea Trp_repressor PF01371.19 gi|73669954|ref|YP_305969.1| - 0.053 13.6 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Trp repressor protein AAA_14 PF13173.6 gi|73669954|ref|YP_305969.1| - 0.062 13.3 0.0 1.5 8.9 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|73669954|ref|YP_305969.1| - 0.085 13.2 0.0 0.39 11.1 0.0 2.2 1 1 0 1 1 1 0 AAA ATPase domain DUF2075 PF09848.9 gi|73669954|ref|YP_305969.1| - 0.2 10.9 0.0 0.43 9.8 0.0 1.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Peptidase_S9 PF00326.21 gi|73669956|ref|YP_305971.1| - 5.9e-15 55.3 0.0 1.1e-08 34.8 0.0 2.2 2 0 0 2 2 2 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|73669956|ref|YP_305971.1| - 1.6e-14 53.7 0.0 5.3e-14 52.1 0.0 1.7 1 1 0 1 1 1 1 Serine aminopeptidase, S33 BAAT_C PF08840.11 gi|73669956|ref|YP_305971.1| - 8.5e-11 42.2 0.0 4.6e-07 30.0 0.1 2.2 2 0 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S15 PF02129.18 gi|73669956|ref|YP_305971.1| - 9.2e-11 41.8 0.0 1.3e-10 41.3 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) DLH PF01738.18 gi|73669956|ref|YP_305971.1| - 9.1e-09 35.2 0.0 0.0022 17.6 0.0 2.4 2 1 0 2 2 2 2 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 gi|73669956|ref|YP_305971.1| - 1.7e-07 31.1 0.0 6.7e-07 29.2 0.0 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|73669956|ref|YP_305971.1| - 3.4e-06 27.8 0.0 5.8e-06 27.1 0.0 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Acyl_transf_2 PF02273.15 gi|73669956|ref|YP_305971.1| - 9.9e-05 21.7 0.0 0.00017 21.0 0.0 1.3 1 0 0 1 1 1 1 Acyl transferase AXE1 PF05448.12 gi|73669956|ref|YP_305971.1| - 0.00046 18.9 0.0 0.043 12.5 0.0 2.2 1 1 1 2 2 2 2 Acetyl xylan esterase (AXE1) Abhydrolase_3 PF07859.13 gi|73669956|ref|YP_305971.1| - 0.00048 20.1 0.0 0.0083 16.0 0.0 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF1100 PF06500.11 gi|73669956|ref|YP_305971.1| - 0.00086 18.2 0.0 0.0022 16.9 0.0 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF1100) FSH1 PF03959.13 gi|73669956|ref|YP_305971.1| - 0.011 15.5 0.0 0.095 12.4 0.0 2.1 1 1 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_2 PF02230.16 gi|73669956|ref|YP_305971.1| - 0.062 13.1 0.6 2.3 8.0 0.1 2.5 3 0 0 3 3 3 0 Phospholipase/Carboxylesterase Abhydrolase_5 PF12695.7 gi|73669956|ref|YP_305971.1| - 0.08 12.7 0.0 14 5.4 0.0 2.5 2 0 0 2 2 2 0 Alpha/beta hydrolase family PGAP1 PF07819.13 gi|73669956|ref|YP_305971.1| - 0.082 12.6 0.4 0.19 11.4 0.0 1.7 2 0 0 2 2 2 0 PGAP1-like protein Esterase_phd PF10503.9 gi|73669956|ref|YP_305971.1| - 0.12 11.8 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 Esterase PHB depolymerase Abhydrolase_8 PF06259.12 gi|73669956|ref|YP_305971.1| - 0.14 11.8 0.1 0.37 10.4 0.0 1.7 2 0 0 2 2 2 0 Alpha/beta hydrolase DUF2974 PF11187.8 gi|73669956|ref|YP_305971.1| - 0.15 11.6 0.0 0.24 10.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) DUF676 PF05057.14 gi|73669956|ref|YP_305971.1| - 0.18 11.3 0.0 0.3 10.6 0.0 1.4 1 0 0 1 1 1 0 Putative serine esterase (DUF676) DUF21 PF01595.20 gi|73669958|ref|YP_305973.1| - 1.2e-46 158.7 5.9 1.9e-46 158.0 5.9 1.3 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|73669958|ref|YP_305973.1| - 6.3e-20 71.0 0.9 2.3e-19 69.2 0.2 2.2 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 gi|73669958|ref|YP_305973.1| - 4.2e-12 46.3 7.4 3.3e-09 37.0 0.0 3.7 5 0 0 5 5 5 2 CBS domain Peptidase_M48 PF01435.18 gi|73669959|ref|YP_305974.1| - 2e-21 76.7 0.0 4.9e-10 39.5 0.0 2.1 1 1 1 2 2 2 2 Peptidase family M48 EI24 PF07264.11 gi|73669959|ref|YP_305974.1| - 0.00081 19.7 2.0 0.0016 18.7 2.0 1.4 1 1 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) Peptidase_M56 PF05569.11 gi|73669959|ref|YP_305974.1| - 0.049 12.8 0.0 0.075 12.2 0.0 1.3 1 0 0 1 1 1 0 BlaR1 peptidase M56 DUF86 PF01934.17 gi|73669960|ref|YP_305975.1| - 2.2e-22 79.1 0.0 2.6e-22 78.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 DUF45 PF01863.17 gi|73669962|ref|YP_305977.1| - 4.3e-57 193.5 1.5 5.1e-57 193.3 1.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.10 gi|73669962|ref|YP_305977.1| - 3.2e-06 27.3 0.1 4.9e-06 26.7 0.1 1.3 1 0 0 1 1 1 1 WLM domain GLEYA PF10528.9 gi|73669962|ref|YP_305977.1| - 0.0075 16.7 0.0 0.014 15.8 0.0 1.4 1 0 0 1 1 1 1 GLEYA domain SprT-like PF10263.9 gi|73669962|ref|YP_305977.1| - 0.033 14.0 0.1 0.059 13.2 0.1 1.4 1 0 0 1 1 1 0 SprT-like family FAD_binding_1 PF00667.20 gi|73669962|ref|YP_305977.1| - 0.089 12.3 0.1 0.12 11.9 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain ABC2_membrane PF01061.24 gi|73669963|ref|YP_305978.1| - 1.4e-21 76.9 18.5 1.4e-21 76.9 18.5 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|73669963|ref|YP_305978.1| - 1.6e-08 34.1 31.8 7.6e-08 31.8 31.8 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|73669963|ref|YP_305978.1| - 0.0075 15.6 17.1 0.14 11.4 12.7 2.1 1 1 0 2 2 2 2 ABC-2 family transporter protein 7TM_GPCR_Sru PF10322.9 gi|73669963|ref|YP_305978.1| - 0.2 10.9 12.8 0.056 12.7 7.3 2.1 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Sru ABC_tran PF00005.27 gi|73669964|ref|YP_305979.1| - 1e-31 110.3 0.0 1.6e-31 109.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73669964|ref|YP_305979.1| - 2.1e-12 47.5 0.8 2.9e-07 30.6 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|73669964|ref|YP_305979.1| - 8.4e-08 32.8 0.1 2.1e-07 31.5 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|73669964|ref|YP_305979.1| - 0.0054 17.3 8.3 0.018 15.6 6.8 2.3 2 1 1 3 3 3 1 AAA domain HEPN_MAE_28990 PF18737.1 gi|73669964|ref|YP_305979.1| - 0.0094 15.9 0.3 0.048 13.6 0.1 1.9 2 0 0 2 2 2 1 MAE_28990/MAE_18760-like HEPN SRP54 PF00448.22 gi|73669964|ref|YP_305979.1| - 0.075 12.7 0.0 0.34 10.5 0.0 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_13 PF13166.6 gi|73669964|ref|YP_305979.1| - 0.13 10.9 2.8 2.1 6.9 0.2 2.3 1 1 0 2 2 2 0 AAA domain ParE_toxin PF05016.15 gi|73669965|ref|YP_305980.1| - 3.4e-06 27.6 0.1 6e-06 26.8 0.1 1.4 1 1 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE SgrR_N PF12793.7 gi|73669967|ref|YP_305982.1| - 0.0013 19.0 0.0 0.029 14.6 0.0 2.3 1 1 2 3 3 3 1 Sugar transport-related sRNA regulator N-term TrmB PF01978.19 gi|73669967|ref|YP_305982.1| - 0.0039 17.0 0.0 0.0077 16.1 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.6 gi|73669967|ref|YP_305982.1| - 0.014 15.6 0.0 0.065 13.4 0.1 2.1 2 1 0 2 2 2 0 Helix-turn-helix domain IF2_N PF04760.15 gi|73669967|ref|YP_305982.1| - 0.049 13.5 0.0 0.12 12.2 0.0 1.7 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region HTH_Crp_2 PF13545.6 gi|73669967|ref|YP_305982.1| - 0.12 12.4 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Hydantoinase_A PF01968.18 gi|73669968|ref|YP_305983.1| - 1.7e-32 112.9 1.8 2.6e-31 109.0 0.1 2.8 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|73669968|ref|YP_305983.1| - 1.2e-30 106.5 3.3 2.9e-27 95.5 1.3 3.2 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|73669968|ref|YP_305983.1| - 3.6e-06 25.9 0.5 0.0065 15.1 0.1 2.2 2 0 0 2 2 2 2 MutL protein ROK PF00480.20 gi|73669968|ref|YP_305983.1| - 0.064 12.7 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 ROK family Sda PF08970.10 gi|73669968|ref|YP_305983.1| - 0.097 12.4 0.0 0.26 11.0 0.0 1.7 1 0 0 1 1 1 0 Sporulation inhibitor A Hydant_A_N PF05378.13 gi|73669969|ref|YP_305984.1| - 4e-32 111.4 2.3 4.3e-28 98.2 0.6 3.4 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|73669969|ref|YP_305984.1| - 1.3e-30 106.7 0.2 2.3e-29 102.6 0.0 2.8 4 0 0 4 4 4 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|73669969|ref|YP_305984.1| - 6e-06 25.1 1.1 0.055 12.1 0.1 2.1 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|73669969|ref|YP_305984.1| - 0.026 14.0 0.1 5.8 6.3 0.0 3.0 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family Sda PF08970.10 gi|73669969|ref|YP_305984.1| - 0.078 12.7 0.0 0.23 11.3 0.0 1.8 1 0 0 1 1 1 0 Sporulation inhibitor A PvlArgDC PF01862.16 gi|73669970|ref|YP_305985.1| - 5.1e-62 208.4 0.1 5.8e-62 208.3 0.1 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Cse1 PF08506.10 gi|73669971|ref|YP_305986.1| - 0.05 12.4 0.0 0.077 11.8 0.0 1.2 1 0 0 1 1 1 0 Cse1 AtpR PF12966.7 gi|73669971|ref|YP_305986.1| - 0.17 12.3 9.8 0.49 10.9 0.2 3.2 3 0 0 3 3 3 0 N-ATPase, AtpR subunit Methyltransf_11 PF08241.12 gi|73669972|ref|YP_305987.1| - 1.8e-20 73.4 0.0 3.4e-20 72.5 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73669972|ref|YP_305987.1| - 6e-17 62.1 0.0 9.8e-17 61.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73669972|ref|YP_305987.1| - 1.1e-16 61.0 0.0 1.4e-16 60.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73669972|ref|YP_305987.1| - 3.3e-15 56.3 0.0 4.2e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73669972|ref|YP_305987.1| - 2.4e-13 50.7 0.0 7.9e-12 45.8 0.0 2.3 1 1 1 2 2 2 1 Methyltransferase domain MetW PF07021.12 gi|73669972|ref|YP_305987.1| - 1.3e-10 41.2 0.0 1.8e-10 40.8 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Ubie_methyltran PF01209.18 gi|73669972|ref|YP_305987.1| - 7.7e-07 28.7 0.0 1.1e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family NodS PF05401.11 gi|73669972|ref|YP_305987.1| - 4.6e-05 23.1 0.0 6.1e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.13 gi|73669972|ref|YP_305987.1| - 4.7e-05 22.9 0.0 6.1e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|73669972|ref|YP_305987.1| - 0.0003 20.4 0.0 0.00042 19.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 gi|73669972|ref|YP_305987.1| - 0.0024 17.9 0.0 0.0031 17.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|73669972|ref|YP_305987.1| - 0.0082 15.5 0.0 0.012 15.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MAAL_C PF07476.11 gi|73669972|ref|YP_305987.1| - 0.011 14.9 0.1 0.016 14.4 0.1 1.1 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Methyltransf_18 PF12847.7 gi|73669972|ref|YP_305987.1| - 0.017 15.1 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain AdoMet_MTase PF07757.13 gi|73669972|ref|YP_305987.1| - 0.041 14.2 0.0 0.063 13.6 0.0 1.3 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase Methyltransf_PK PF05891.12 gi|73669972|ref|YP_305987.1| - 0.049 13.2 0.0 0.077 12.5 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase ER PF01133.17 gi|73669972|ref|YP_305987.1| - 0.092 12.8 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Enhancer of rudimentary Methyltransf_2 PF00891.18 gi|73669972|ref|YP_305987.1| - 0.21 10.9 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain LPG_synthase_TM PF03706.13 gi|73669973|ref|YP_305988.1| - 6.2e-39 134.3 11.6 7.8e-39 134.0 11.6 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Glycos_transf_2 PF00535.26 gi|73669974|ref|YP_305989.1| - 3.5e-27 95.3 0.1 5e-27 94.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|73669974|ref|YP_305989.1| - 4.1e-09 36.3 0.0 7.1e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|73669974|ref|YP_305989.1| - 2.1e-08 34.3 0.0 2.9e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|73669974|ref|YP_305989.1| - 0.076 13.5 0.0 0.25 11.9 0.0 1.9 2 0 0 2 2 2 0 Glycosyl transferase family 2 UPF0228 PF05727.11 gi|73669976|ref|YP_305991.1| - 6.6e-46 155.1 10.5 1.2e-45 154.3 8.9 1.9 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0228) Disulph_isomer PF06491.11 gi|73669976|ref|YP_305991.1| - 0.1 12.7 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Disulphide isomerase APC_15aa PF05972.11 gi|73669976|ref|YP_305991.1| - 0.12 12.7 0.2 0.27 11.6 0.2 1.6 1 0 0 1 1 1 0 APC 15 residue motif Ribosomal_L15e PF00827.17 gi|73669977|ref|YP_305992.1| - 7.6e-81 270.4 7.6 8.5e-81 270.2 7.6 1.0 1 0 0 1 1 1 1 Ribosomal L15 RNA_binding PF01877.17 gi|73669978|ref|YP_305993.1| - 3.8e-36 124.0 0.3 4.6e-36 123.7 0.3 1.0 1 0 0 1 1 1 1 RNA binding DUF2407_C PF13373.6 gi|73669978|ref|YP_305993.1| - 0.062 13.5 0.3 0.088 13.0 0.3 1.3 1 0 0 1 1 1 0 DUF2407 C-terminal domain RNase_P_p30 PF01876.16 gi|73669979|ref|YP_305994.1| - 9.1e-45 152.7 0.0 1e-44 152.6 0.0 1.0 1 0 0 1 1 1 1 RNase P subunit p30 RNase_P_Rpp14 PF01900.19 gi|73669980|ref|YP_305995.1| - 2.4e-17 63.0 0.1 3e-17 62.7 0.1 1.1 1 0 0 1 1 1 1 Rpp14/Pop5 family BMC PF00936.19 gi|73669980|ref|YP_305995.1| - 0.027 14.4 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 BMC domain Proteasome PF00227.26 gi|73669981|ref|YP_305996.1| - 4.8e-62 208.8 0.6 6.8e-62 208.3 0.6 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|73669981|ref|YP_305996.1| - 1.2e-14 53.6 0.5 4.1e-14 51.9 0.1 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature SBDS PF01172.18 gi|73669982|ref|YP_305997.1| - 3.7e-23 81.4 0.0 6.5e-23 80.6 0.0 1.4 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|73669982|ref|YP_305997.1| - 4.6e-20 71.8 0.4 6.3e-20 71.3 0.4 1.2 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 gi|73669982|ref|YP_305997.1| - 0.059 13.4 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Elongation factor G C-terminus KH_6 PF15985.5 gi|73669983|ref|YP_305998.1| - 3e-10 40.3 0.1 5.7e-10 39.4 0.1 1.5 1 0 0 1 1 1 1 KH domain ECR1_N PF14382.6 gi|73669983|ref|YP_305998.1| - 1.5e-06 27.9 0.0 3.5e-06 26.7 0.0 1.7 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region KH_1 PF00013.29 gi|73669983|ref|YP_305998.1| - 2e-06 27.5 0.2 4.3e-06 26.5 0.2 1.6 1 0 0 1 1 1 1 KH domain S1 PF00575.23 gi|73669983|ref|YP_305998.1| - 7.6e-06 26.2 0.8 2e-05 24.9 0.1 2.1 3 0 0 3 3 3 1 S1 RNA binding domain KH_2 PF07650.17 gi|73669983|ref|YP_305998.1| - 0.00029 20.6 0.0 0.00086 19.1 0.0 1.9 1 0 0 1 1 1 1 KH domain RNase_PH PF01138.21 gi|73669984|ref|YP_305999.1| - 2.3e-34 118.7 0.0 2.3e-34 118.7 0.0 2.8 2 1 1 3 3 3 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|73669984|ref|YP_305999.1| - 6.4e-16 58.1 1.2 1.1e-15 57.4 0.1 2.0 2 0 0 2 2 2 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.21 gi|73669985|ref|YP_306000.1| - 3e-30 105.4 0.0 4.7e-30 104.8 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|73669985|ref|YP_306000.1| - 9.5e-13 48.0 0.8 2.2e-12 46.8 0.8 1.7 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 HopA1 PF17914.1 gi|73669985|ref|YP_306000.1| - 0.16 11.7 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 HopA1 effector protein family Ribosomal_L37ae PF01780.19 gi|73669986|ref|YP_306001.1| - 8.2e-30 102.7 2.5 1e-29 102.5 2.5 1.1 1 0 0 1 1 1 1 Ribosomal L37ae protein family HalOD2 PF18547.1 gi|73669986|ref|YP_306001.1| - 0.00096 19.0 0.8 0.00096 19.0 0.8 2.2 1 1 1 2 2 2 1 Halobacterial output domain 2 Zn_Tnp_IS1595 PF12760.7 gi|73669986|ref|YP_306001.1| - 0.001 19.0 1.9 0.0016 18.4 1.9 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain C1_1 PF00130.22 gi|73669986|ref|YP_306001.1| - 0.0072 16.2 0.9 0.011 15.6 0.9 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn-ribbon_8 PF09723.10 gi|73669986|ref|YP_306001.1| - 0.021 14.9 1.0 3.5 7.8 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain DUF4379 PF14311.6 gi|73669986|ref|YP_306001.1| - 0.05 14.0 1.2 0.089 13.2 0.2 1.8 2 0 0 2 2 2 0 Probable Zinc-ribbon domain zf-H2C2_2 PF13465.6 gi|73669986|ref|YP_306001.1| - 0.059 13.8 0.7 2.7 8.6 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain Rep_fac-A_C PF08646.10 gi|73669986|ref|YP_306001.1| - 0.065 13.0 0.1 0.08 12.7 0.1 1.2 1 0 0 1 1 1 0 Replication factor-A C terminal domain DUF951 PF06107.11 gi|73669986|ref|YP_306001.1| - 0.091 12.7 3.3 0.18 11.8 3.3 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF951) zinc_ribbon_4 PF13717.6 gi|73669986|ref|YP_306001.1| - 0.13 12.2 0.5 0.13 12.2 0.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain TFIIS_C PF01096.18 gi|73669986|ref|YP_306001.1| - 0.24 11.3 3.0 3 7.8 0.6 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Nudix_N_2 PF14803.6 gi|73669986|ref|YP_306001.1| - 0.55 10.2 5.1 9 6.3 0.3 2.5 2 1 1 3 3 3 0 Nudix N-terminal A2L_zn_ribbon PF08792.10 gi|73669986|ref|YP_306001.1| - 0.66 9.8 3.8 3.9 7.3 1.2 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|73669987|ref|YP_306002.1| - 2.8e-09 36.5 8.6 4.1e-09 36.0 8.6 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|73669987|ref|YP_306002.1| - 6.6e-05 22.4 2.2 0.16 11.6 0.6 2.1 1 1 1 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 gi|73669987|ref|YP_306002.1| - 0.00023 20.4 0.7 0.0079 15.6 0.1 2.1 2 0 0 2 2 2 1 zinc-ribbon domain HypA PF01155.19 gi|73669987|ref|YP_306002.1| - 0.0011 18.9 0.5 0.0011 18.9 0.5 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|73669987|ref|YP_306002.1| - 0.0014 18.1 1.0 0.0017 17.8 1.0 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|73669987|ref|YP_306002.1| - 0.0018 17.9 2.3 0.0031 17.2 2.3 1.4 1 1 0 1 1 1 1 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|73669987|ref|YP_306002.1| - 0.0022 17.9 2.5 0.0043 16.9 2.5 1.6 1 1 0 1 1 1 1 Putative transposase DNA-binding domain Cys_rich_CPXG PF14255.6 gi|73669987|ref|YP_306002.1| - 0.0074 16.2 2.1 0.048 13.6 0.2 2.1 2 0 0 2 2 2 1 Cysteine-rich CPXCG DZR PF12773.7 gi|73669987|ref|YP_306002.1| - 0.014 15.4 1.1 0.02 14.9 1.1 1.4 1 1 0 1 1 1 0 Double zinc ribbon DUF951 PF06107.11 gi|73669987|ref|YP_306002.1| - 0.016 15.1 3.1 0.1 12.5 0.1 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF951) zinc_ribbon_6 PF14599.6 gi|73669987|ref|YP_306002.1| - 0.027 14.5 1.7 0.037 14.0 1.7 1.2 1 0 0 1 1 1 0 Zinc-ribbon zinc-ribbons_6 PF07191.12 gi|73669987|ref|YP_306002.1| - 0.028 14.4 0.5 0.037 14.0 0.5 1.2 1 0 0 1 1 1 0 zinc-ribbons zinc_ribbon_9 PF14369.6 gi|73669987|ref|YP_306002.1| - 0.035 14.4 0.8 0.047 13.9 0.8 1.2 1 0 0 1 1 1 0 zinc-ribbon Zn-ribbon_8 PF09723.10 gi|73669987|ref|YP_306002.1| - 0.036 14.2 4.8 0.07 13.3 4.8 1.6 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|73669987|ref|YP_306002.1| - 0.04 13.8 4.2 0.81 9.7 4.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain TFIIS_C PF01096.18 gi|73669987|ref|YP_306002.1| - 0.043 13.7 2.9 4.2 7.3 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) RNHCP PF12647.7 gi|73669987|ref|YP_306002.1| - 0.044 13.8 0.2 0.048 13.6 0.2 1.1 1 0 0 1 1 1 0 RNHCP domain CpXC PF14353.6 gi|73669987|ref|YP_306002.1| - 0.047 13.7 1.7 0.5 10.4 0.0 2.0 1 1 1 2 2 2 0 CpXC protein YacG PF03884.14 gi|73669987|ref|YP_306002.1| - 0.049 13.4 0.6 3.3 7.5 0.1 2.1 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG DUF2072 PF09845.9 gi|73669987|ref|YP_306002.1| - 0.055 13.7 0.5 0.055 13.7 0.5 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein zf-Di19 PF05605.12 gi|73669987|ref|YP_306002.1| - 0.064 13.6 0.4 0.45 10.9 0.1 1.9 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Anti-TRAP PF15777.5 gi|73669987|ref|YP_306002.1| - 0.079 12.9 0.1 0.082 12.9 0.1 1.1 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein C1_1 PF00130.22 gi|73669987|ref|YP_306002.1| - 0.089 12.7 1.9 0.18 11.7 2.0 1.5 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) FANCL_C PF11793.8 gi|73669987|ref|YP_306002.1| - 0.098 12.8 1.7 0.74 10.0 0.1 2.0 1 1 1 2 2 2 0 FANCL C-terminal domain Zn_Tnp_IS1595 PF12760.7 gi|73669987|ref|YP_306002.1| - 0.11 12.5 5.8 0.14 12.2 0.1 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DiS_P_DiS PF06750.13 gi|73669987|ref|YP_306002.1| - 0.12 12.5 2.5 5.2 7.2 0.3 2.1 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain DUF1451 PF07295.11 gi|73669987|ref|YP_306002.1| - 0.13 12.3 0.7 0.15 12.1 0.7 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Zn_ribbon_SprT PF17283.2 gi|73669987|ref|YP_306002.1| - 0.26 11.2 8.0 1 9.3 0.3 2.4 2 1 0 2 2 2 0 SprT-like zinc ribbon domain zinc_ribbon_10 PF10058.9 gi|73669987|ref|YP_306002.1| - 0.58 9.9 4.3 14 5.5 4.0 2.2 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein UPF0547 PF10571.9 gi|73669987|ref|YP_306002.1| - 0.92 9.6 7.4 6.9 6.9 7.4 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 Response_reg PF00072.24 gi|73669988|ref|YP_306003.1| - 1.6e-21 76.6 0.1 1.9e-21 76.3 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain MinC_N PF05209.13 gi|73669988|ref|YP_306003.1| - 0.0076 16.2 0.1 0.052 13.5 0.0 2.1 1 1 1 2 2 2 1 Septum formation inhibitor MinC, N-terminal domain MTD PF01993.18 gi|73669988|ref|YP_306003.1| - 0.026 13.8 0.0 0.052 12.9 0.0 1.4 1 1 1 2 2 2 0 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase THF_DHG_CYH_C PF02882.19 gi|73669988|ref|YP_306003.1| - 0.068 12.5 0.1 0.094 12.0 0.1 1.3 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain B12-binding PF02310.19 gi|73669988|ref|YP_306003.1| - 0.12 12.5 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain DDE_5 PF13546.6 gi|73669989|ref|YP_306004.1| - 4.2e-49 167.3 0.0 5.8e-49 166.9 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_1 PF01609.21 gi|73669989|ref|YP_306004.1| - 2.7e-05 23.9 0.0 5.7e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain MC1 PF05854.11 gi|73669989|ref|YP_306004.1| - 0.11 12.8 0.0 0.23 11.8 0.0 1.5 1 0 0 1 1 1 0 Non-histone chromosomal protein MC1 adh_short PF00106.25 gi|73669990|ref|YP_306005.1| - 4.3e-63 212.3 0.4 5.2e-63 212.0 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|73669990|ref|YP_306005.1| - 5.1e-54 183.3 0.3 1e-52 179.1 0.3 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|73669990|ref|YP_306005.1| - 6e-18 65.4 0.2 7.8e-18 65.0 0.2 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|73669990|ref|YP_306005.1| - 2.5e-05 23.8 0.2 3.5e-05 23.4 0.2 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|73669990|ref|YP_306005.1| - 6.2e-05 22.3 0.2 7.3e-05 22.0 0.2 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|73669990|ref|YP_306005.1| - 0.00023 21.1 0.0 0.00029 20.8 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 gi|73669990|ref|YP_306005.1| - 0.0007 19.9 0.1 0.0011 19.2 0.1 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DUF881 PF05949.12 gi|73669990|ref|YP_306005.1| - 0.0036 17.2 0.4 0.0055 16.6 0.4 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF881) 3Beta_HSD PF01073.19 gi|73669990|ref|YP_306005.1| - 0.0071 15.4 0.1 0.008 15.2 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family THF_DHG_CYH_C PF02882.19 gi|73669990|ref|YP_306005.1| - 0.014 14.8 0.2 0.026 13.9 0.2 1.4 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NmrA PF05368.13 gi|73669990|ref|YP_306005.1| - 0.018 14.6 0.3 0.032 13.8 0.3 1.4 1 0 0 1 1 1 0 NmrA-like family GDP_Man_Dehyd PF16363.5 gi|73669990|ref|YP_306005.1| - 0.022 14.2 0.0 0.033 13.6 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase NosD PF05048.13 gi|73669991|ref|YP_306006.1| - 1.7e-24 86.4 54.1 1.1e-16 60.8 21.1 3.0 2 1 1 3 3 3 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73669991|ref|YP_306006.1| - 4.7e-19 68.8 64.4 9.9e-13 48.2 32.9 3.2 2 1 1 3 3 3 2 Right handed beta helix region Transglut_N PF00868.20 gi|73669991|ref|YP_306006.1| - 0.086 13.2 0.1 0.16 12.4 0.1 1.4 1 0 0 1 1 1 0 Transglutaminase family zf-UBP PF02148.19 gi|73669992|ref|YP_306007.1| - 8.7e-15 54.8 8.0 1.2e-14 54.4 8.0 1.2 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein zf-UBP_var PF17807.1 gi|73669992|ref|YP_306007.1| - 0.00076 19.2 3.2 0.0013 18.5 3.2 1.3 1 0 0 1 1 1 1 Variant UBP zinc finger ABC2_membrane PF01061.24 gi|73669993|ref|YP_306008.1| - 2.6e-24 85.8 28.6 2.6e-24 85.8 28.6 1.9 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|73669993|ref|YP_306008.1| - 1.2e-10 41.0 33.1 1.2e-10 41.0 33.1 1.6 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|73669994|ref|YP_306009.1| - 6.1e-18 65.6 0.0 1.2e-17 64.7 0.0 1.5 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.6 gi|73669994|ref|YP_306009.1| - 3.2e-11 43.8 0.0 1.3e-10 41.8 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|73669994|ref|YP_306009.1| - 7e-08 32.6 0.0 9.8e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Alpha-amylase PF00128.24 gi|73669995|ref|YP_306010.1| - 1.5e-23 84.0 0.2 3e-18 66.5 0.0 3.2 2 1 1 3 3 3 2 Alpha amylase, catalytic domain CBM_48 PF02922.18 gi|73669995|ref|YP_306010.1| - 4.9e-14 52.4 0.0 5.4e-06 26.7 0.0 2.7 2 0 0 2 2 2 2 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Pur_ac_phosph_N PF16656.5 gi|73669995|ref|YP_306010.1| - 0.0048 17.4 1.2 0.0073 16.9 0.0 1.9 2 0 0 2 2 2 1 Purple acid Phosphatase, N-terminal domain Glyco_hydro_70 PF02324.16 gi|73669995|ref|YP_306010.1| - 0.082 11.1 0.0 0.12 10.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 70 Sulfate_transp PF00916.20 gi|73669996|ref|YP_306011.1| - 9.6e-72 241.8 31.6 1.5e-71 241.1 31.6 1.2 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 gi|73669996|ref|YP_306011.1| - 2.2e-14 53.1 0.1 3.8e-14 52.3 0.1 1.3 1 0 0 1 1 1 1 STAS domain SpoIIAA-like PF11964.8 gi|73669997|ref|YP_306012.1| - 5.1e-19 69.1 0.3 5.8e-19 68.9 0.3 1.0 1 0 0 1 1 1 1 SpoIIAA-like Acetyltransf_4 PF13420.7 gi|73669998|ref|YP_306013.1| - 5.2e-21 75.4 1.5 6.2e-21 75.2 1.5 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|73669998|ref|YP_306013.1| - 5.4e-11 43.3 0.0 6.2e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73669998|ref|YP_306013.1| - 2e-10 40.9 0.1 2.4e-10 40.7 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73669998|ref|YP_306013.1| - 2.1e-06 28.0 0.1 3.5e-06 27.3 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73669998|ref|YP_306013.1| - 2.6e-06 27.4 0.3 3.3e-06 27.1 0.3 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73669998|ref|YP_306013.1| - 0.00059 19.8 0.0 0.00084 19.3 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein CheD PF03975.13 gi|73669998|ref|YP_306013.1| - 0.16 12.1 0.1 0.33 11.1 0.0 1.5 2 0 0 2 2 2 0 CheD chemotactic sensory transduction USP7_ICP0_bdg PF12436.8 gi|73669998|ref|YP_306013.1| - 0.22 10.8 1.7 1.3 8.2 1.0 2.0 1 1 1 2 2 2 0 ICP0-binding domain of Ubiquitin-specific protease 7 Y1_Tnp PF01797.16 gi|73669999|ref|YP_306014.1| - 1.2e-31 109.3 0.0 1.5e-31 109.0 0.0 1.1 1 0 0 1 1 1 1 Transposase IS200 like Lipid_DES PF08557.10 gi|73669999|ref|YP_306014.1| - 0.1 12.1 0.0 0.26 10.8 0.0 1.8 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) ATP-grasp_4 PF13535.6 gi|73670000|ref|YP_306015.1| - 1.8e-62 209.7 0.1 2.8e-62 209.1 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|73670000|ref|YP_306015.1| - 0.0025 17.9 0.0 0.0041 17.2 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain FF PF01846.19 gi|73670000|ref|YP_306015.1| - 1.1 9.5 5.5 2.4 8.4 0.2 3.3 3 0 0 3 3 3 0 FF domain TPR_17 PF13431.6 gi|73670001|ref|YP_306016.1| - 2.9e-58 190.2 35.2 1.3e-05 25.3 0.1 13.2 13 1 1 14 14 13 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670001|ref|YP_306016.1| - 5.5e-56 182.2 49.8 2.2e-05 24.2 0.1 14.6 15 0 0 15 15 15 11 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670001|ref|YP_306016.1| - 2.5e-55 180.1 48.6 1.1e-05 25.3 0.1 14.0 14 0 0 14 14 13 10 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73670001|ref|YP_306016.1| - 5.5e-50 165.2 50.9 2.3e-05 24.0 0.1 13.6 14 0 0 14 14 14 11 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670001|ref|YP_306016.1| - 1.2e-48 162.5 53.4 2.6e-08 33.4 0.2 13.1 3 1 10 13 13 13 11 TPR repeat TPR_12 PF13424.6 gi|73670001|ref|YP_306016.1| - 5.4e-41 138.8 36.2 1.1e-08 35.2 1.1 8.2 5 1 2 7 7 7 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670001|ref|YP_306016.1| - 2.6e-40 136.8 10.0 1.1e-07 32.4 0.1 6.7 2 2 5 8 8 8 8 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670001|ref|YP_306016.1| - 8.8e-38 128.7 28.3 8.6e-09 35.8 0.4 7.9 3 2 5 9 9 8 8 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670001|ref|YP_306016.1| - 3.1e-35 117.8 16.7 0.0014 19.2 0.0 11.7 2 1 10 12 12 11 10 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670001|ref|YP_306016.1| - 1.5e-21 74.7 25.4 0.015 15.3 0.1 11.2 11 0 0 11 11 11 6 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670001|ref|YP_306016.1| - 3.8e-20 71.1 50.0 0.0087 15.9 0.1 11.2 12 0 0 12 12 11 6 Tetratricopeptide repeat TPR_4 PF07721.14 gi|73670001|ref|YP_306016.1| - 2.2e-16 58.7 0.0 5.8 7.8 0.0 9.0 9 0 0 9 9 8 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670001|ref|YP_306016.1| - 3.3e-14 52.8 8.4 0.12 12.6 0.1 6.6 1 1 5 8 8 8 6 Tetratricopeptide repeat TPR_15 PF13429.6 gi|73670001|ref|YP_306016.1| - 2.3e-10 40.2 11.2 0.00011 21.5 0.5 4.0 2 1 3 5 5 5 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670001|ref|YP_306016.1| - 6.5e-10 39.1 25.5 0.0078 16.4 0.1 6.9 4 1 4 8 8 8 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_3 PF07720.12 gi|73670001|ref|YP_306016.1| - 8.1e-08 32.1 23.4 0.19 11.7 0.1 11.1 12 0 0 12 12 11 1 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|73670001|ref|YP_306016.1| - 2.4e-07 30.4 24.0 0.042 13.2 0.1 6.9 2 1 4 7 7 7 4 Coatomer epsilon subunit Pec_lyase_N PF04431.13 gi|73670001|ref|YP_306016.1| - 8.2e-07 29.2 11.4 2.6 8.4 0.0 8.1 9 0 0 9 9 8 1 Pectate lyase, N terminus TPR_21 PF09976.9 gi|73670001|ref|YP_306016.1| - 1.7e-06 27.9 18.3 7.1 6.3 0.0 9.2 2 1 7 9 9 9 0 Tetratricopeptide repeat-like domain nos_propeller PF18764.1 gi|73670001|ref|YP_306016.1| - 2e-06 27.6 4.4 35 4.4 0.0 7.1 7 2 2 9 9 8 0 Nitrous oxide reductase propeller repeat TPR_20 PF14561.6 gi|73670001|ref|YP_306016.1| - 9.7e-05 22.6 13.9 15 6.0 0.5 8.5 2 1 9 11 11 11 0 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73670001|ref|YP_306016.1| - 0.00014 21.4 8.8 0.29 10.4 0.1 4.4 2 1 1 4 4 4 2 MalT-like TPR region Mad3_BUB1_I PF08311.12 gi|73670001|ref|YP_306016.1| - 0.0032 17.5 22.4 2.5 8.1 0.1 8.4 5 3 3 8 8 8 2 Mad3/BUB1 homology region 1 DUF4810 PF16068.5 gi|73670001|ref|YP_306016.1| - 0.024 15.2 16.5 27 5.4 0.0 8.2 6 3 0 8 8 8 0 Domain of unknown function (DUF4810) TPR_6 PF13174.6 gi|73670001|ref|YP_306016.1| - 0.05 14.2 24.7 75 4.3 0.0 10.3 12 0 0 12 12 9 0 Tetratricopeptide repeat BTAD PF03704.17 gi|73670001|ref|YP_306016.1| - 5 7.5 16.8 8.2 6.9 0.6 5.0 1 1 3 6 6 6 0 Bacterial transcriptional activator domain DUF5406 PF17400.2 gi|73670001|ref|YP_306016.1| - 7.9 6.9 8.4 89 3.5 0.1 4.5 1 1 4 5 5 5 0 Family of unknown function (DUF5406) Glyoxalase PF00903.25 gi|73670002|ref|YP_306017.1| - 3.2e-05 24.1 0.0 0.0015 18.7 0.0 2.1 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 gi|73670002|ref|YP_306017.1| - 0.002 18.1 0.0 0.008 16.1 0.0 1.8 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 gi|73670002|ref|YP_306017.1| - 0.0094 16.7 0.0 0.013 16.2 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain CAAD PF14159.6 gi|73670003|ref|YP_306018.1| - 0.019 14.8 0.2 0.029 14.2 0.2 1.3 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase MFS_1 PF07690.16 gi|73670003|ref|YP_306018.1| - 0.025 13.5 0.0 0.03 13.3 0.0 1.2 1 0 0 1 1 1 0 Major Facilitator Superfamily MscS_TM PF12794.7 gi|73670003|ref|YP_306018.1| - 0.049 12.5 0.0 0.071 12.0 0.0 1.3 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 RA PF00788.23 gi|73670003|ref|YP_306018.1| - 0.12 13.0 0.0 0.23 12.1 0.0 1.4 1 0 0 1 1 1 0 Ras association (RalGDS/AF-6) domain TPR_12 PF13424.6 gi|73670004|ref|YP_306019.1| - 1e-99 326.9 47.6 1e-22 80.2 0.4 11.5 6 3 7 13 13 13 12 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670004|ref|YP_306019.1| - 2.1e-96 313.5 52.3 4.9e-12 45.3 0.0 15.4 14 1 1 15 15 15 13 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73670004|ref|YP_306019.1| - 2.4e-82 267.7 53.4 2.6e-07 30.1 0.1 16.4 16 0 0 16 16 16 16 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670004|ref|YP_306019.1| - 1.3e-77 249.8 47.3 1.8e-05 24.5 0.1 16.9 16 0 0 16 16 16 16 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670004|ref|YP_306019.1| - 3.6e-76 245.1 52.7 9.9e-05 22.3 0.1 16.5 16 0 0 16 16 16 15 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670004|ref|YP_306019.1| - 4.2e-54 176.7 32.6 1.2e-05 24.9 0.1 16.0 17 0 0 17 17 16 10 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73670004|ref|YP_306019.1| - 1.9e-52 171.9 47.4 6.8e-05 23.0 0.1 17.3 18 1 0 18 18 16 13 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670004|ref|YP_306019.1| - 3.1e-49 164.4 60.0 1.5e-05 24.6 0.3 17.7 8 2 9 17 17 17 13 TPR repeat TPR_19 PF14559.6 gi|73670004|ref|YP_306019.1| - 2.8e-39 133.4 41.3 4.5e-06 27.1 0.1 11.4 2 2 11 13 13 13 12 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670004|ref|YP_306019.1| - 4.5e-36 120.4 24.8 0.31 12.0 0.1 16.1 7 2 9 16 16 16 8 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670004|ref|YP_306019.1| - 4.1e-35 120.1 21.5 2.1e-07 31.5 0.2 12.7 9 3 3 12 12 12 5 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670004|ref|YP_306019.1| - 4.8e-17 61.9 5.6 0.13 12.4 0.0 10.0 4 4 7 12 12 12 3 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73670004|ref|YP_306019.1| - 9.8e-17 61.3 25.1 0.00015 21.2 0.0 6.8 2 2 4 7 7 7 5 MalT-like TPR region TPR_4 PF07721.14 gi|73670004|ref|YP_306019.1| - 8.5e-15 53.8 0.0 11 6.9 0.0 11.9 13 0 0 13 13 12 0 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|73670004|ref|YP_306019.1| - 2e-13 49.5 20.4 0.097 12.1 0.0 8.5 8 0 0 8 8 8 3 SHNi-TPR DUF3856 PF12968.7 gi|73670004|ref|YP_306019.1| - 5.5e-13 49.2 13.6 5.3e-06 26.6 0.1 7.5 4 3 4 8 8 7 3 Domain of Unknown Function (DUF3856) TPR_21 PF09976.9 gi|73670004|ref|YP_306019.1| - 1.1e-11 44.8 25.6 1.3 8.7 0.1 11.8 3 1 8 12 12 11 4 Tetratricopeptide repeat-like domain TPR_6 PF13174.6 gi|73670004|ref|YP_306019.1| - 3.8e-10 39.7 33.9 0.085 13.5 0.1 11.8 13 0 0 13 13 11 2 Tetratricopeptide repeat DUF2225 PF09986.9 gi|73670004|ref|YP_306019.1| - 4.9e-07 29.7 30.5 6.2e-05 22.8 0.2 7.7 1 1 5 7 7 7 2 Uncharacterized protein conserved in bacteria (DUF2225) TOM20_plant PF06552.12 gi|73670004|ref|YP_306019.1| - 1.6e-06 28.0 19.9 0.3 10.8 0.4 6.8 2 2 4 7 7 7 4 Plant specific mitochondrial import receptor subunit TOM20 MIT PF04212.18 gi|73670004|ref|YP_306019.1| - 2.8e-06 27.3 42.0 0.72 10.0 0.1 11.1 11 2 2 13 13 11 3 MIT (microtubule interacting and transport) domain Coatomer_E PF04733.14 gi|73670004|ref|YP_306019.1| - 2.9e-06 26.9 33.9 0.074 12.5 0.2 9.2 2 2 6 10 10 10 2 Coatomer epsilon subunit TetR_C_19 PF17924.1 gi|73670004|ref|YP_306019.1| - 1.2e-05 25.9 18.2 12 6.6 0.1 8.1 8 0 0 8 8 7 0 Tetracyclin repressor-like, C-terminal domain TPR_3 PF07720.12 gi|73670004|ref|YP_306019.1| - 8.9e-05 22.4 36.5 0.82 9.7 0.1 12.5 15 0 0 15 15 13 1 Tetratricopeptide repeat RPN7 PF10602.9 gi|73670004|ref|YP_306019.1| - 0.0001 22.1 24.6 0.0018 18.0 1.0 7.0 3 2 4 7 7 6 3 26S proteasome subunit RPN7 PTP2 PF17022.5 gi|73670004|ref|YP_306019.1| - 0.00017 21.2 0.4 3.4 7.2 0.0 3.9 1 1 2 3 3 3 1 Polar tube protein 2 from Microsporidia ANAPC3 PF12895.7 gi|73670004|ref|YP_306019.1| - 0.00096 19.3 27.2 2.5 8.4 1.3 7.9 4 3 3 8 8 8 3 Anaphase-promoting complex, cyclosome, subunit 3 DUF5113 PF17140.4 gi|73670004|ref|YP_306019.1| - 0.0025 17.7 27.6 0.096 12.5 0.3 7.2 5 4 2 7 7 7 2 Domain of unknown function (DUF5113) DUF4363 PF14276.6 gi|73670004|ref|YP_306019.1| - 0.0032 17.6 0.6 2.4 8.3 0.0 4.1 3 1 1 4 4 2 1 Domain of unknown function (DUF4363) TPR_15 PF13429.6 gi|73670004|ref|YP_306019.1| - 0.0046 16.2 19.8 0.031 13.5 0.6 6.4 2 2 3 6 6 6 3 Tetratricopeptide repeat NARP1 PF12569.8 gi|73670004|ref|YP_306019.1| - 0.0069 15.3 42.7 0.92 8.3 1.1 7.7 1 1 6 8 8 8 2 NMDA receptor-regulated protein 1 Glyco_hydro_98M PF08306.11 gi|73670004|ref|YP_306019.1| - 0.0085 15.4 6.8 1.5 8.0 0.2 4.2 2 1 3 5 5 4 1 Glycosyl hydrolase family 98 TPR_20 PF14561.6 gi|73670004|ref|YP_306019.1| - 0.011 16.0 28.5 21 5.5 0.1 11.4 3 2 7 11 11 10 0 Tetratricopeptide repeat ANAPC5 PF12862.7 gi|73670004|ref|YP_306019.1| - 0.068 13.3 12.7 20 5.3 1.2 6.2 3 2 3 6 6 5 0 Anaphase-promoting complex subunit 5 DUF627 PF04781.12 gi|73670004|ref|YP_306019.1| - 0.084 12.9 13.8 34 4.5 0.1 7.7 5 4 4 10 10 10 0 Protein of unknown function (DUF627) DUF2802 PF10975.8 gi|73670004|ref|YP_306019.1| - 0.11 12.7 15.2 28 4.9 0.1 7.6 6 2 1 8 8 7 0 Protein of unknown function (DUF2802) HMG_box PF00505.19 gi|73670004|ref|YP_306019.1| - 0.13 12.7 8.2 69 4.0 0.0 4.9 4 0 0 4 4 4 0 HMG (high mobility group) box Fis1_TPR_C PF14853.6 gi|73670004|ref|YP_306019.1| - 0.24 11.5 40.3 2.3 8.3 0.2 10.3 12 0 0 12 12 10 0 Fis1 C-terminal tetratricopeptide repeat Rapsyn_N PF10579.9 gi|73670004|ref|YP_306019.1| - 0.59 10.3 10.2 0.47 10.6 0.1 5.1 5 3 1 6 6 4 0 Rapsyn N-terminal myristoylation and linker region BTAD PF03704.17 gi|73670004|ref|YP_306019.1| - 0.82 10.1 25.6 9.9 6.6 0.5 7.7 3 2 6 9 9 9 0 Bacterial transcriptional activator domain NDUFB10 PF10249.9 gi|73670004|ref|YP_306019.1| - 2.9 8.4 5.7 5.2 7.6 0.1 4.0 3 1 1 4 4 4 0 NADH-ubiquinone oxidoreductase subunit 10 HTH_Bact PF18768.1 gi|73670004|ref|YP_306019.1| - 3.3 7.4 12.0 16 5.1 0.1 5.3 7 0 0 7 7 3 0 Helix-turn-helix bacterial domain Phe_tRNA-synt_N PF02912.18 gi|73670004|ref|YP_306019.1| - 3.6 7.6 13.8 41 4.2 0.4 5.3 4 0 0 4 4 4 0 Aminoacyl tRNA synthetase class II, N-terminal domain PPR PF01535.20 gi|73670004|ref|YP_306019.1| - 6.7 7.2 32.0 4.1 7.9 0.1 11.0 12 3 0 12 12 9 0 PPR repeat DUF349 PF03993.12 gi|73670004|ref|YP_306019.1| - 8.7 6.7 12.4 60 4.0 0.2 5.2 4 0 0 4 4 4 0 Domain of Unknown Function (DUF349) NYD-SP28_assoc PF14775.6 gi|73670004|ref|YP_306019.1| - 9.3 6.4 21.7 36 4.6 0.1 6.8 8 0 0 8 8 6 0 Sperm tail C-terminal domain Adenyl_cycl_N PF12633.7 gi|73670005|ref|YP_306020.1| - 0.011 15.7 0.5 0.011 15.7 0.5 1.0 1 0 0 1 1 1 0 Adenylate cyclase NT domain DDE_5 PF13546.6 gi|73670006|ref|YP_306021.1| - 4.5e-15 55.7 0.0 4.1e-14 52.6 0.0 1.9 1 1 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_1 PF01609.21 gi|73670006|ref|YP_306021.1| - 1.8e-10 40.9 0.2 2.5e-10 40.3 0.2 1.2 1 0 0 1 1 1 1 Transposase DDE domain DUF5060 PF16586.5 gi|73670007|ref|YP_306022.1| - 0.064 13.6 0.1 3 8.3 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5060) Yae1_N PF09811.9 gi|73670008|ref|YP_306023.1| - 0.0088 15.7 2.8 0.31 10.8 0.7 2.4 2 0 0 2 2 2 2 Essential protein Yae1, N terminal Herpes_US9 PF06072.11 gi|73670008|ref|YP_306023.1| - 0.03 14.2 0.3 0.044 13.7 0.3 1.2 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 HTH_Crp_2 PF13545.6 gi|73670009|ref|YP_306024.1| - 0.00021 21.2 0.2 0.00052 19.9 0.2 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|73670009|ref|YP_306024.1| - 0.00037 20.0 0.9 0.00072 19.1 0.9 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|73670009|ref|YP_306024.1| - 0.00082 19.2 0.1 0.002 18.0 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|73670009|ref|YP_306024.1| - 0.00088 19.7 0.4 0.0018 18.7 0.4 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|73670009|ref|YP_306024.1| - 0.0011 18.8 0.1 0.0024 17.7 0.1 1.5 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|73670009|ref|YP_306024.1| - 0.016 15.4 0.0 0.043 14.0 0.0 1.7 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 gi|73670009|ref|YP_306024.1| - 0.021 15.2 0.1 7 7.1 0.1 3.2 3 0 0 3 3 3 0 Transcriptional regulator PmrD PF11183.8 gi|73670009|ref|YP_306024.1| - 0.026 14.6 0.2 0.42 10.8 0.0 2.4 1 1 1 2 2 2 0 Polymyxin resistance protein PmrD TrmB PF01978.19 gi|73670009|ref|YP_306024.1| - 0.039 13.8 0.1 0.084 12.8 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 gi|73670009|ref|YP_306024.1| - 0.16 12.4 0.1 0.27 11.6 0.1 1.3 1 0 0 1 1 1 0 Penicillinase repressor OrfB_Zn_ribbon PF07282.11 gi|73670010|ref|YP_306025.1| - 0.00067 19.5 0.0 0.00078 19.3 0.0 1.1 1 0 0 1 1 1 1 Putative transposase DNA-binding domain DUF1943 PF09172.11 gi|73670011|ref|YP_306026.1| - 0.64 9.2 7.3 0.71 9.0 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) DUF4337 PF14235.6 gi|73670011|ref|YP_306026.1| - 3.2 7.9 5.4 3.5 7.7 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) CDC45 PF02724.14 gi|73670011|ref|YP_306026.1| - 3.3 5.9 11.4 3.6 5.8 11.4 1.0 1 0 0 1 1 1 0 CDC45-like protein Peptidase_S49_N PF08496.10 gi|73670012|ref|YP_306027.1| - 0.11 12.6 0.4 0.14 12.2 0.4 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal RPN2_C PF18004.1 gi|73670012|ref|YP_306027.1| - 0.42 10.5 4.7 0.6 10.0 4.7 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain zinc_ribbon_6 PF14599.6 gi|73670013|ref|YP_306028.1| - 0.0083 16.1 1.0 0.12 12.4 1.2 2.1 1 1 1 2 2 2 2 Zinc-ribbon zinc_ribbon_6 PF14599.6 gi|73670014|ref|YP_306029.1| - 0.0015 18.5 2.1 0.032 14.2 2.5 2.0 1 1 1 2 2 2 2 Zinc-ribbon eIF-1a PF01176.19 gi|73670015|ref|YP_306030.1| - 5.7e-17 61.3 0.2 8e-17 60.8 0.2 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Zn_ribbon_SprT PF17283.2 gi|73670016|ref|YP_306031.1| - 0.0041 17.0 0.4 0.0058 16.5 0.4 1.2 1 0 0 1 1 1 1 SprT-like zinc ribbon domain zinc_ribbon_6 PF14599.6 gi|73670016|ref|YP_306031.1| - 0.0072 16.3 1.8 0.093 12.8 0.0 2.1 1 1 1 2 2 2 2 Zinc-ribbon Plant_vir_prot PF01307.17 gi|73670017|ref|YP_306032.1| - 0.14 12.4 0.3 0.19 12.0 0.3 1.2 1 0 0 1 1 1 0 Plant viral movement protein eIF-1a PF01176.19 gi|73670018|ref|YP_306033.1| - 5.7e-17 61.3 0.2 9.9e-17 60.5 0.2 1.4 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 TPP_enzyme_N PF02776.18 gi|73670019|ref|YP_306034.1| - 1.4e-50 171.2 0.0 9.3e-50 168.6 0.1 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|73670019|ref|YP_306034.1| - 1.3e-39 135.4 0.0 3.3e-39 134.1 0.0 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|73670019|ref|YP_306034.1| - 5.9e-25 87.6 0.0 2.4e-24 85.6 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain Aldedh PF00171.22 gi|73670020|ref|YP_306035.1| - 1.4e-130 435.9 0.0 1.6e-130 435.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Ocnus PF05005.15 gi|73670021|ref|YP_306036.1| - 0.017 15.2 0.1 0.022 14.9 0.1 1.3 1 0 0 1 1 1 0 Janus/Ocnus family (Ocnus) DUF4969 PF16339.5 gi|73670021|ref|YP_306036.1| - 0.045 14.1 0.3 0.09 13.1 0.1 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4969) Orthopox_B11R PF07033.11 gi|73670021|ref|YP_306036.1| - 0.072 12.9 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 Orthopoxvirus B11R protein DUF4148 PF13663.6 gi|73670021|ref|YP_306036.1| - 0.2 11.9 2.2 0.57 10.4 2.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4148) DUF4011 PF13195.6 gi|73670022|ref|YP_306037.1| - 2e-39 135.2 1.8 1.5e-38 132.3 0.3 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF4011) MTES_1575 PF18741.1 gi|73670022|ref|YP_306037.1| - 4.7e-33 113.2 0.0 1.1e-32 112.1 0.0 1.7 1 0 0 1 1 1 1 REase_MTES_1575 AAA_12 PF13087.6 gi|73670022|ref|YP_306037.1| - 2.1e-14 53.6 0.0 6.6e-14 52.0 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|73670022|ref|YP_306037.1| - 3.7e-13 49.9 0.1 1.4e-06 28.3 0.0 2.9 2 0 0 2 2 2 2 AAA domain DUF3320 PF11784.8 gi|73670022|ref|YP_306037.1| - 1e-11 44.6 0.1 2.9e-11 43.1 0.1 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF3320) AAA_30 PF13604.6 gi|73670022|ref|YP_306037.1| - 2.5e-08 33.9 0.2 0.00016 21.5 0.2 2.4 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.6 gi|73670022|ref|YP_306037.1| - 2.5e-07 31.1 0.0 0.0011 19.3 0.0 2.8 3 0 0 3 3 2 2 AAA domain DUF2075 PF09848.9 gi|73670022|ref|YP_306037.1| - 1.4e-06 27.8 0.2 0.0051 16.1 0.0 3.3 3 0 0 3 3 3 1 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 gi|73670022|ref|YP_306037.1| - 0.00079 19.2 0.1 0.17 11.6 0.0 2.6 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase IstB_IS21 PF01695.17 gi|73670022|ref|YP_306037.1| - 0.0022 17.7 0.0 0.0052 16.5 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein Helicase_RecD PF05127.14 gi|73670022|ref|YP_306037.1| - 0.0042 17.0 0.0 0.032 14.1 0.0 2.4 2 0 0 2 2 2 1 Helicase UvrD-helicase PF00580.21 gi|73670022|ref|YP_306037.1| - 0.0044 16.6 0.0 0.014 15.0 0.0 1.9 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_16 PF13191.6 gi|73670022|ref|YP_306037.1| - 0.0048 17.3 0.1 0.054 13.9 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain ResIII PF04851.15 gi|73670022|ref|YP_306037.1| - 0.0058 16.7 0.0 0.19 11.7 0.0 2.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DUF559 PF04480.12 gi|73670022|ref|YP_306037.1| - 0.024 14.5 0.0 0.059 13.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF559) RAP PF08373.10 gi|73670022|ref|YP_306037.1| - 0.054 13.6 0.1 0.13 12.4 0.1 1.7 1 0 0 1 1 1 0 RAP domain AAA_5 PF07728.14 gi|73670022|ref|YP_306037.1| - 0.088 12.8 0.1 0.74 9.8 0.0 2.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|73670022|ref|YP_306037.1| - 0.1 12.1 0.0 0.22 11.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 gi|73670022|ref|YP_306037.1| - 0.13 12.5 0.1 0.91 9.8 0.0 2.4 3 0 0 3 3 2 0 AAA domain PIF1 PF05970.14 gi|73670022|ref|YP_306037.1| - 0.15 11.2 0.1 1.6 7.8 0.0 2.2 2 0 0 2 2 2 0 PIF1-like helicase PhoH PF02562.16 gi|73670022|ref|YP_306037.1| - 0.22 11.0 0.2 19 4.6 0.1 2.3 2 0 0 2 2 2 0 PhoH-like protein EamA PF00892.20 gi|73670023|ref|YP_306038.1| - 1.1e-33 116.3 42.7 8.2e-18 64.9 16.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|73670023|ref|YP_306038.1| - 0.0014 18.1 15.7 0.024 14.0 16.0 2.3 1 1 0 1 1 1 1 Triose-phosphate Transporter family TMEM234 PF10639.9 gi|73670023|ref|YP_306038.1| - 0.0054 16.8 10.3 0.09 12.8 0.9 2.6 2 1 0 2 2 2 2 Putative transmembrane family 234 PUNUT PF16913.5 gi|73670023|ref|YP_306038.1| - 0.0068 15.7 20.0 0.0071 15.6 5.9 2.4 1 1 0 2 2 2 2 Purine nucleobase transmembrane transport TatC PF00902.18 gi|73670024|ref|YP_306039.1| - 4.9e-42 144.1 24.5 6.7e-42 143.7 24.5 1.2 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) TMEM100 PF16311.5 gi|73670024|ref|YP_306039.1| - 0.089 12.4 0.1 0.28 10.8 0.1 1.8 1 0 0 1 1 1 0 Transmembrane protein 100 TatC PF00902.18 gi|73670025|ref|YP_306040.1| - 1.8e-46 158.6 23.3 2.4e-46 158.2 23.3 1.2 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) MttA_Hcf106 PF02416.16 gi|73670026|ref|YP_306041.1| - 1.4e-19 69.1 1.2 3.3e-19 67.9 1.2 1.7 1 1 0 1 1 1 1 mttA/Hcf106 family DUF4834 PF16118.5 gi|73670026|ref|YP_306041.1| - 0.028 15.4 0.0 0.038 15.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Trypan_PARP PF05887.11 gi|73670026|ref|YP_306041.1| - 0.03 14.3 7.7 0.04 13.9 7.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) RNA_pol_Rpc4 PF05132.14 gi|73670026|ref|YP_306041.1| - 0.55 10.6 5.8 0.69 10.3 5.8 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 MttA_Hcf106 PF02416.16 gi|73670027|ref|YP_306042.1| - 4.5e-18 64.3 2.1 1.1e-17 63.1 2.1 1.8 1 1 0 1 1 1 1 mttA/Hcf106 family ATP-synt_B PF00430.18 gi|73670027|ref|YP_306042.1| - 0.00048 20.2 0.1 0.00062 19.9 0.1 1.2 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) DUF2458 PF10454.9 gi|73670027|ref|YP_306042.1| - 0.019 14.6 0.3 0.023 14.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2458) Spectrin PF00435.21 gi|73670027|ref|YP_306042.1| - 0.066 13.7 0.6 0.079 13.4 0.6 1.1 1 0 0 1 1 1 0 Spectrin repeat DUF948 PF06103.11 gi|73670027|ref|YP_306042.1| - 0.13 12.5 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) NUDIX PF00293.28 gi|73670028|ref|YP_306043.1| - 1.4e-13 51.0 0.0 2.1e-13 50.4 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain Radical_SAM PF04055.21 gi|73670029|ref|YP_306044.1| - 2.6e-17 63.7 0.0 5.7e-17 62.6 0.0 1.5 2 0 0 2 2 1 1 Radical SAM superfamily DZR PF12773.7 gi|73670029|ref|YP_306044.1| - 0.00035 20.5 0.1 0.00035 20.5 0.1 2.8 2 1 0 2 2 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|73670029|ref|YP_306044.1| - 0.0047 16.3 10.4 0.11 12.0 0.1 3.4 3 0 0 3 3 3 2 zinc-ribbon domain zf-C4_Topoisom PF01396.19 gi|73670029|ref|YP_306044.1| - 0.0054 16.5 1.5 3 7.7 0.3 2.9 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger YhfH PF14149.6 gi|73670029|ref|YP_306044.1| - 0.0092 15.9 0.4 0.0092 15.9 0.4 3.0 3 0 0 3 3 2 1 YhfH-like protein zinc_ribbon_2 PF13240.6 gi|73670029|ref|YP_306044.1| - 0.0097 15.6 12.9 0.046 13.4 0.2 3.6 3 0 0 3 3 3 2 zinc-ribbon domain Fer4_12 PF13353.6 gi|73670029|ref|YP_306044.1| - 0.013 15.7 0.8 0.02 15.2 0.0 1.7 2 0 0 2 2 1 0 4Fe-4S single cluster domain ADK_lid PF05191.14 gi|73670029|ref|YP_306044.1| - 0.11 12.5 1.3 9.5 6.3 0.0 3.2 3 0 0 3 3 3 0 Adenylate kinase, active site lid zf_UBZ PF18439.1 gi|73670029|ref|YP_306044.1| - 0.3 10.7 8.4 0.43 10.2 0.2 3.1 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf_C2H2_10 PF18414.1 gi|73670029|ref|YP_306044.1| - 0.5 10.0 5.6 0.31 10.6 1.1 2.7 2 0 0 2 2 2 0 C2H2 type zinc-finger DUF1610 PF07754.11 gi|73670029|ref|YP_306044.1| - 1 9.4 10.2 6.5 6.8 2.4 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) TF_Zn_Ribbon PF08271.12 gi|73670029|ref|YP_306044.1| - 3.5 7.2 10.0 0.71 9.4 0.2 3.1 2 1 0 3 3 3 0 TFIIB zinc-binding zf-NADH-PPase PF09297.11 gi|73670029|ref|YP_306044.1| - 7.2 6.4 8.3 2 8.1 0.0 3.2 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain RNA_POL_M_15KD PF02150.16 gi|73670029|ref|YP_306044.1| - 7.9 6.4 13.0 0.4 10.6 0.3 3.8 4 0 0 4 4 4 0 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.7 gi|73670029|ref|YP_306044.1| - 8.8 6.4 13.6 20 5.3 0.0 4.2 4 0 0 4 4 4 0 Transposase zinc-ribbon domain PAS_3 PF08447.12 gi|73670030|ref|YP_306045.1| - 1.1e-66 221.1 7.8 1.5e-21 76.5 0.1 5.5 5 0 0 5 5 5 3 PAS fold HisKA_2 PF07568.12 gi|73670030|ref|YP_306045.1| - 5.9e-29 100.0 1.0 5.9e-29 100.0 1.0 2.0 2 0 0 2 2 2 1 Histidine kinase PAS PF00989.25 gi|73670030|ref|YP_306045.1| - 6.5e-29 100.2 0.8 3.4e-08 33.5 0.1 5.5 4 1 0 4 4 4 4 PAS fold PAS_9 PF13426.7 gi|73670030|ref|YP_306045.1| - 7.2e-29 100.1 5.7 1.4e-08 34.9 0.1 5.7 5 0 0 5 5 5 4 PAS domain PAS_4 PF08448.10 gi|73670030|ref|YP_306045.1| - 2.8e-19 69.4 0.0 2.5e-05 24.5 0.0 5.5 5 0 0 5 5 5 3 PAS fold HATPase_c PF02518.26 gi|73670030|ref|YP_306045.1| - 5.6e-11 42.9 0.4 3.7e-10 40.3 0.2 2.5 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.6 gi|73670030|ref|YP_306045.1| - 1.9e-05 24.7 0.0 0.16 12.1 0.0 3.9 3 0 0 3 3 3 2 PAS domain HATPase_c_2 PF13581.6 gi|73670030|ref|YP_306045.1| - 0.00024 21.0 0.0 0.00055 19.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_10 PF13596.6 gi|73670030|ref|YP_306045.1| - 0.0011 19.5 0.3 2 9.1 0.0 3.8 3 0 0 3 3 3 1 PAS domain HWE_HK PF07536.14 gi|73670030|ref|YP_306045.1| - 0.012 16.3 0.1 0.033 14.9 0.1 1.8 1 0 0 1 1 1 0 HWE histidine kinase DUF3237 PF11578.8 gi|73670030|ref|YP_306045.1| - 0.11 12.3 0.0 0.28 11.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) Methyltransf_2 PF00891.18 gi|73670031|ref|YP_306046.1| - 8.2e-12 44.9 0.0 1.4e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain Dimerisation2 PF16864.5 gi|73670031|ref|YP_306046.1| - 2.6e-09 36.9 0.1 3e-07 30.3 0.0 2.4 2 0 0 2 2 2 1 Dimerisation domain Methyltransf_12 PF08242.12 gi|73670031|ref|YP_306046.1| - 0.0025 18.5 0.0 0.012 16.3 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670031|ref|YP_306046.1| - 0.016 15.9 0.0 0.035 14.8 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Dimerisation PF08100.11 gi|73670031|ref|YP_306046.1| - 0.029 14.4 0.0 0.069 13.2 0.0 1.6 1 0 0 1 1 1 0 Dimerisation domain PCMT PF01135.19 gi|73670031|ref|YP_306046.1| - 0.057 13.2 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) HTH_20 PF12840.7 gi|73670031|ref|YP_306046.1| - 0.18 11.9 0.0 1 9.5 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain DDE_Tnp_1 PF01609.21 gi|73670033|ref|YP_306048.1| - 5.1e-22 78.6 1.1 6.9e-22 78.1 1.1 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73670033|ref|YP_306048.1| - 0.0075 15.9 0.2 0.27 10.9 0.2 2.2 1 1 0 1 1 1 1 DDE superfamily endonuclease NKWYS PF10364.9 gi|73670033|ref|YP_306048.1| - 0.019 15.1 1.4 1.2 9.3 0.4 2.5 2 0 0 2 2 2 0 Putative capsular polysaccharide synthesis protein Peptidase_S41 PF03572.18 gi|73670033|ref|YP_306048.1| - 0.15 11.7 0.0 0.33 10.5 0.0 1.7 2 0 0 2 2 2 0 Peptidase family S41 DUF2795 PF11387.8 gi|73670034|ref|YP_306049.1| - 1.3e-10 41.3 0.0 1.8e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) FliS PF02561.14 gi|73670034|ref|YP_306049.1| - 0.036 14.3 0.1 0.04 14.2 0.1 1.0 1 0 0 1 1 1 0 Flagellar protein FliS CMD PF02627.20 gi|73670035|ref|YP_306050.1| - 2.7e-10 40.2 0.0 3e-10 40.0 0.0 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SinI PF08671.10 gi|73670035|ref|YP_306050.1| - 0.1 12.4 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 Anti-repressor SinI Acetyltransf_3 PF13302.7 gi|73670036|ref|YP_306051.1| - 3.9e-20 72.9 0.0 5e-20 72.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73670036|ref|YP_306051.1| - 3.6e-10 40.1 0.0 4.5e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 gi|73670036|ref|YP_306051.1| - 0.00015 21.5 0.0 0.00072 19.3 0.0 1.9 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73670036|ref|YP_306051.1| - 0.0028 17.6 0.0 0.0055 16.6 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein BPD_transp_1 PF00528.22 gi|73670037|ref|YP_306052.1| - 4.4e-24 85.2 12.2 7e-24 84.6 12.2 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component NapE PF06796.11 gi|73670037|ref|YP_306052.1| - 0.024 14.1 0.6 0.7 9.5 0.0 2.6 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE SBP_bac_11 PF13531.6 gi|73670038|ref|YP_306053.1| - 2.8e-58 197.4 0.1 3.2e-58 197.2 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|73670038|ref|YP_306053.1| - 3.2e-22 79.9 3.0 1.3e-20 74.6 2.8 2.2 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|73670038|ref|YP_306053.1| - 1.1e-08 34.8 0.0 1.8e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|73670038|ref|YP_306053.1| - 2.1e-07 31.0 0.9 2.3e-05 24.4 0.2 2.3 1 1 1 2 2 2 2 Bacterial extracellular solute-binding protein PBP_like_2 PF12849.7 gi|73670038|ref|YP_306053.1| - 3.4e-07 30.2 2.8 1.6e-06 28.0 1.0 2.0 1 1 0 2 2 2 1 PBP superfamily domain PBP_like PF12727.7 gi|73670038|ref|YP_306053.1| - 7.9e-06 25.1 0.1 2.1e-05 23.7 0.1 1.7 1 1 0 1 1 1 1 PBP superfamily domain Virul_fac_BrkB PF03631.15 gi|73670039|ref|YP_306054.1| - 9e-51 173.0 22.6 1e-50 172.8 22.6 1.0 1 0 0 1 1 1 1 Virulence factor BrkB ABC_tran PF00005.27 gi|73670040|ref|YP_306055.1| - 2.2e-32 112.4 0.0 3.4e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73670040|ref|YP_306055.1| - 4.5e-15 56.2 0.5 3.6e-09 36.9 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73670040|ref|YP_306055.1| - 3e-09 36.6 0.0 7.6e-09 35.3 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|73670040|ref|YP_306055.1| - 4.1e-06 26.7 0.0 0.079 12.7 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|73670040|ref|YP_306055.1| - 0.00018 21.2 0.1 0.00038 20.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|73670040|ref|YP_306055.1| - 0.0098 16.4 0.0 0.014 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 gi|73670040|ref|YP_306055.1| - 0.043 14.1 0.0 0.44 10.8 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit CbiQ PF02361.16 gi|73670041|ref|YP_306056.1| - 1.7e-34 119.4 8.8 2.4e-34 118.9 8.8 1.1 1 0 0 1 1 1 1 Cobalt transport protein PDGLE PF13190.6 gi|73670042|ref|YP_306057.1| - 6e-07 29.3 0.1 8.7e-07 28.8 0.1 1.3 1 1 0 1 1 1 1 PDGLE domain Yip1 PF04893.17 gi|73670042|ref|YP_306057.1| - 0.013 15.2 0.4 0.017 14.8 0.4 1.2 1 0 0 1 1 1 0 Yip1 domain CbiM PF01891.16 gi|73670043|ref|YP_306058.1| - 3.6e-62 209.9 15.0 4e-62 209.7 15.0 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region ECF_trnsprt PF12822.7 gi|73670043|ref|YP_306058.1| - 5.5e-05 23.3 19.3 5.5e-05 23.3 19.3 1.8 2 0 0 2 2 2 1 ECF transporter, substrate-specific component COX7a PF02238.15 gi|73670043|ref|YP_306058.1| - 0.63 10.5 4.4 1.1 9.7 0.3 2.9 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII Polysacc_synt PF01943.17 gi|73670044|ref|YP_306059.1| - 3.4e-24 85.7 23.2 3.4e-24 85.7 23.2 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|73670044|ref|YP_306059.1| - 9.5e-17 61.4 7.8 9.5e-17 61.4 7.8 3.8 3 2 0 3 3 3 1 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|73670044|ref|YP_306059.1| - 1.1e-16 61.0 26.8 7.7e-12 45.2 12.2 2.9 2 1 0 2 2 2 2 MatE Polysacc_synt_3 PF13440.6 gi|73670044|ref|YP_306059.1| - 4.8e-15 55.5 14.3 4.8e-15 55.5 14.3 2.2 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein MurJ PF03023.14 gi|73670044|ref|YP_306059.1| - 1.5e-06 27.1 28.4 2.7e-06 26.3 28.4 1.4 1 0 0 1 1 1 1 Lipid II flippase MurJ NosD PF05048.13 gi|73670046|ref|YP_306061.1| - 1e-57 195.2 31.8 1e-57 195.2 31.8 1.9 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670046|ref|YP_306061.1| - 1.1e-20 74.1 33.2 1.1e-20 74.1 33.2 2.4 2 0 0 2 2 2 1 Right handed beta helix region PKD PF00801.20 gi|73670046|ref|YP_306061.1| - 3.1e-06 26.9 0.2 9.1e-06 25.4 0.2 1.8 1 0 0 1 1 1 1 PKD domain PGF-CTERM PF18204.1 gi|73670046|ref|YP_306061.1| - 2.4e-05 24.2 0.1 2.4e-05 24.2 0.1 2.1 2 0 0 2 2 2 1 PGF-CTERM motif Pectinesterase PF01095.19 gi|73670046|ref|YP_306061.1| - 0.017 13.8 0.6 0.067 11.9 0.1 2.1 2 0 0 2 2 2 0 Pectinesterase PKD_3 PF16820.5 gi|73670046|ref|YP_306061.1| - 0.025 14.3 0.1 0.072 12.8 0.1 1.8 1 0 0 1 1 1 0 PKD-like domain NUDIX PF00293.28 gi|73670047|ref|YP_306062.1| - 1.8e-11 44.2 0.2 2.5e-11 43.7 0.2 1.2 1 0 0 1 1 1 1 NUDIX domain AAA_15 PF13175.6 gi|73670048|ref|YP_306063.1| - 5.9e-45 154.6 15.3 5.9e-45 154.6 15.3 3.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 gi|73670048|ref|YP_306063.1| - 3.4e-22 79.6 14.0 1e-12 48.5 3.1 2.8 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF2813 PF11398.8 gi|73670048|ref|YP_306063.1| - 1.9e-15 57.0 1.2 4.4e-12 46.0 0.2 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF2813) AAA_23 PF13476.6 gi|73670048|ref|YP_306063.1| - 1.4e-11 45.3 18.6 1.4e-11 45.3 18.6 3.0 1 1 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|73670048|ref|YP_306063.1| - 2.2e-10 40.4 2.4 1.8e-08 34.1 0.3 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73670048|ref|YP_306063.1| - 0.00027 20.6 0.1 0.0007 19.3 0.0 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|73670048|ref|YP_306063.1| - 0.00087 18.9 0.2 0.013 15.1 0.0 2.4 2 0 0 2 2 2 1 AAA domain UvrD-helicase PF00580.21 gi|73670049|ref|YP_306064.1| - 1.7e-34 119.8 0.1 1.8e-22 80.2 0.1 2.1 1 1 1 2 2 2 2 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|73670049|ref|YP_306064.1| - 7.7e-20 71.7 0.0 1.1e-19 71.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|73670049|ref|YP_306064.1| - 6.7e-05 22.7 0.0 0.052 13.3 0.0 2.1 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|73670049|ref|YP_306064.1| - 0.0022 18.2 0.0 1.6 9.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|73670049|ref|YP_306064.1| - 0.0033 16.9 0.0 0.52 9.7 0.0 2.1 2 0 0 2 2 2 2 PhoH-like protein Viral_helicase1 PF01443.18 gi|73670049|ref|YP_306064.1| - 0.0057 16.4 0.0 3.9 7.1 0.0 2.4 2 1 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_11 PF13086.6 gi|73670049|ref|YP_306064.1| - 0.031 14.1 0.0 2.6 7.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain ResIII PF04851.15 gi|73670049|ref|YP_306064.1| - 0.059 13.4 0.1 0.15 12.0 0.1 2.0 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit UvrD_C PF13361.6 gi|73670050|ref|YP_306065.1| - 1.3e-09 38.0 0.4 1.4e-09 37.8 0.4 1.1 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 gi|73670050|ref|YP_306065.1| - 9.7e-05 22.1 0.0 0.00055 19.7 0.0 2.0 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain HAS-barrel PF09378.10 gi|73670050|ref|YP_306065.1| - 0.036 14.2 0.3 0.05 13.8 0.3 1.2 1 0 0 1 1 1 0 HAS barrel domain Viral_helicase1 PF01443.18 gi|73670050|ref|YP_306065.1| - 0.04 13.7 0.0 0.055 13.2 0.0 1.3 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Ssu72 PF04722.13 gi|73670050|ref|YP_306065.1| - 0.041 13.4 0.1 0.045 13.3 0.1 1.1 1 0 0 1 1 1 0 Ssu72-like protein MarR_2 PF12802.7 gi|73670051|ref|YP_306066.1| - 4.9e-08 32.8 0.0 8.8e-08 31.9 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|73670051|ref|YP_306066.1| - 5.2e-08 32.7 0.0 9e-08 31.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|73670051|ref|YP_306066.1| - 1.1e-07 32.2 0.1 1.5e-06 28.6 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|73670051|ref|YP_306066.1| - 0.00035 20.1 0.0 0.0011 18.4 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|73670051|ref|YP_306066.1| - 0.00048 20.0 0.1 0.0017 18.2 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 gi|73670051|ref|YP_306066.1| - 0.0044 17.2 0.0 0.0077 16.4 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain RuvB_C PF05491.13 gi|73670051|ref|YP_306066.1| - 0.019 14.9 0.2 1.5 8.8 0.0 2.5 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain HTH_34 PF13601.6 gi|73670051|ref|YP_306066.1| - 0.02 15.0 0.1 0.029 14.5 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain KIP1 PF07765.12 gi|73670051|ref|YP_306066.1| - 0.037 14.1 0.7 0.11 12.7 0.0 2.1 3 0 0 3 3 3 0 KIP1-like protein Lon_C PF05362.13 gi|73670052|ref|YP_306067.1| - 1.2e-88 296.0 0.5 2.6e-88 294.9 0.5 1.6 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA PF00004.29 gi|73670052|ref|YP_306067.1| - 1.2e-21 77.5 0.0 3.6e-21 76.0 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) LON_substr_bdg PF02190.16 gi|73670052|ref|YP_306067.1| - 1.3e-12 48.0 1.2 1.7e-12 47.7 0.2 1.7 2 0 0 2 2 1 1 ATP-dependent protease La (LON) substrate-binding domain ChlI PF13541.6 gi|73670052|ref|YP_306067.1| - 1.8e-09 37.5 0.1 3.6e-09 36.5 0.1 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.14 gi|73670052|ref|YP_306067.1| - 9.3e-09 35.4 0.0 4.6e-08 33.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|73670052|ref|YP_306067.1| - 4.6e-07 30.4 0.2 9.6e-05 22.8 0.1 3.4 3 1 0 3 3 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|73670052|ref|YP_306067.1| - 4.1e-06 27.1 0.0 5.9e-05 23.4 0.0 2.5 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|73670052|ref|YP_306067.1| - 6e-05 22.9 0.0 0.00021 21.1 0.0 1.9 2 0 0 2 2 1 1 IstB-like ATP binding protein AAA_2 PF07724.14 gi|73670052|ref|YP_306067.1| - 0.00013 22.1 0.0 0.00035 20.7 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_PrkA PF08298.11 gi|73670052|ref|YP_306067.1| - 0.00016 20.7 0.0 0.00031 19.8 0.0 1.4 1 0 0 1 1 1 1 PrkA AAA domain RuvB_N PF05496.12 gi|73670052|ref|YP_306067.1| - 0.0002 21.1 0.1 0.00078 19.2 0.0 2.1 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|73670052|ref|YP_306067.1| - 0.0011 19.5 0.2 0.097 13.2 0.1 3.0 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|73670052|ref|YP_306067.1| - 0.0015 18.5 0.1 0.0043 17.0 0.1 1.7 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_33 PF13671.6 gi|73670052|ref|YP_306067.1| - 0.0063 16.7 0.3 0.017 15.3 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_3 PF07726.11 gi|73670052|ref|YP_306067.1| - 0.01 15.7 0.0 0.045 13.6 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF815 PF05673.13 gi|73670052|ref|YP_306067.1| - 0.012 14.8 0.0 0.038 13.2 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Birna_VP4 PF01768.16 gi|73670052|ref|YP_306067.1| - 0.016 15.1 0.2 0.032 14.1 0.2 1.4 1 0 0 1 1 1 0 Birnavirus VP4 protein NACHT PF05729.12 gi|73670052|ref|YP_306067.1| - 0.03 14.3 0.0 0.39 10.6 0.0 2.4 2 0 0 2 2 2 0 NACHT domain AAA_14 PF13173.6 gi|73670052|ref|YP_306067.1| - 0.036 14.1 0.0 0.089 12.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 gi|73670052|ref|YP_306067.1| - 0.04 13.1 0.1 0.04 13.1 0.1 2.3 2 0 0 2 2 2 0 TIP49 P-loop domain TsaE PF02367.17 gi|73670052|ref|YP_306067.1| - 0.043 13.8 0.4 0.092 12.8 0.0 1.7 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 gi|73670052|ref|YP_306067.1| - 0.044 13.5 0.1 0.13 12.0 0.0 1.8 2 0 0 2 2 1 0 AAA domain NB-ARC PF00931.22 gi|73670052|ref|YP_306067.1| - 0.08 12.1 2.0 0.17 11.1 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain AAA_7 PF12775.7 gi|73670052|ref|YP_306067.1| - 0.088 12.3 0.0 0.17 11.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 gi|73670052|ref|YP_306067.1| - 0.1 13.1 1.4 0.29 11.6 0.1 2.3 2 0 0 2 2 2 0 ABC transporter RNA_helicase PF00910.22 gi|73670052|ref|YP_306067.1| - 0.1 13.0 0.0 0.3 11.5 0.0 1.8 1 0 0 1 1 1 0 RNA helicase Viral_helicase1 PF01443.18 gi|73670052|ref|YP_306067.1| - 0.11 12.2 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 gi|73670052|ref|YP_306067.1| - 0.14 12.5 1.9 0.26 11.6 0.1 2.3 3 0 0 3 3 2 0 AAA domain AAA_11 PF13086.6 gi|73670052|ref|YP_306067.1| - 0.15 11.9 1.8 0.46 10.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|73670052|ref|YP_306067.1| - 0.15 11.4 0.7 0.38 10.1 0.1 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI DUF4899 PF16240.5 gi|73670052|ref|YP_306067.1| - 0.18 11.0 4.0 1.5 8.0 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4899) Syntaxin_2 PF14523.6 gi|73670052|ref|YP_306067.1| - 0.18 12.2 2.7 16 5.9 1.6 2.7 2 0 0 2 2 2 0 Syntaxin-like protein Cytidylate_kin PF02224.18 gi|73670052|ref|YP_306067.1| - 1.1 9.0 4.6 0.9 9.2 0.1 2.8 3 0 0 3 3 3 0 Cytidylate kinase Thioredoxin PF00085.20 gi|73670053|ref|YP_306068.1| - 1.7e-14 53.6 0.0 2.4e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|73670053|ref|YP_306068.1| - 9.8e-07 29.0 0.0 1.7e-06 28.2 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_6 PF13848.6 gi|73670053|ref|YP_306068.1| - 2.8e-05 24.1 0.0 3.6e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain DIM1 PF02966.16 gi|73670053|ref|YP_306068.1| - 0.00014 21.6 0.0 0.00018 21.3 0.0 1.2 1 0 0 1 1 1 1 Mitosis protein DIM1 TraF PF13728.6 gi|73670053|ref|YP_306068.1| - 0.0012 18.7 0.0 0.0014 18.5 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_7 PF13899.6 gi|73670053|ref|YP_306068.1| - 0.0064 16.7 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 gi|73670053|ref|YP_306068.1| - 0.015 14.7 0.3 0.021 14.2 0.0 1.4 2 0 0 2 2 2 0 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 gi|73670053|ref|YP_306068.1| - 0.021 15.2 0.0 0.072 13.5 0.0 1.9 1 1 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_3 PF13192.6 gi|73670053|ref|YP_306068.1| - 0.026 14.6 0.0 0.075 13.1 0.0 1.8 2 0 0 2 2 2 0 Thioredoxin domain AhpC-TSA PF00578.21 gi|73670053|ref|YP_306068.1| - 0.027 14.4 0.0 0.043 13.7 0.0 1.3 1 0 0 1 1 1 0 AhpC/TSA family Thioredoxin_9 PF14595.6 gi|73670053|ref|YP_306068.1| - 0.027 14.2 0.0 0.037 13.8 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin DUF836 PF05768.14 gi|73670053|ref|YP_306068.1| - 0.058 13.8 0.0 0.085 13.3 0.0 1.5 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DUF953 PF06110.11 gi|73670053|ref|YP_306068.1| - 0.14 11.8 0.0 0.27 10.9 0.0 1.5 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) ABC1 PF03109.16 gi|73670054|ref|YP_306069.1| - 3.9e-40 136.7 0.0 7.5e-40 135.8 0.0 1.5 1 0 0 1 1 1 1 ABC1 family Pkinase PF00069.25 gi|73670054|ref|YP_306069.1| - 9.4e-07 28.5 0.0 2.2e-06 27.2 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|73670054|ref|YP_306069.1| - 9.5e-07 29.0 0.0 1.9e-06 28.0 0.0 1.6 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 gi|73670054|ref|YP_306069.1| - 2.4e-05 24.0 0.0 8.6e-05 22.2 0.0 1.8 2 0 0 2 2 2 1 RIO1 family Pkinase_Tyr PF07714.17 gi|73670054|ref|YP_306069.1| - 0.042 13.1 0.0 0.13 11.5 0.0 1.8 1 1 0 1 1 1 0 Protein tyrosine kinase Choline_kinase PF01633.20 gi|73670054|ref|YP_306069.1| - 0.1 12.1 0.0 0.24 10.9 0.0 1.7 1 0 0 1 1 1 0 Choline/ethanolamine kinase UBA_3 PF09288.10 gi|73670054|ref|YP_306069.1| - 0.14 12.0 0.1 2.1 8.3 0.0 2.8 3 0 0 3 3 3 0 Fungal ubiquitin-associated domain DUF3082 PF11282.8 gi|73670054|ref|YP_306069.1| - 0.35 11.1 2.5 0.32 11.3 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3082) NUDIX PF00293.28 gi|73670055|ref|YP_306070.1| - 0.089 12.8 0.0 0.23 11.5 0.0 1.7 1 0 0 1 1 1 0 NUDIX domain FMN_red PF03358.15 gi|73670056|ref|YP_306071.1| - 1.7e-23 83.1 0.0 2.2e-23 82.7 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73670056|ref|YP_306071.1| - 3.7e-11 43.1 0.0 4.8e-11 42.7 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|73670056|ref|YP_306071.1| - 0.00024 21.4 0.0 0.0012 19.1 0.0 1.9 2 0 0 2 2 2 1 Flavodoxin domain MFS_1 PF07690.16 gi|73670057|ref|YP_306072.1| - 3.6e-46 157.7 45.3 3.6e-46 157.7 45.3 1.6 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 gi|73670057|ref|YP_306072.1| - 8.3e-05 21.3 27.5 0.019 13.5 14.7 2.3 1 1 1 2 2 2 2 MFS/sugar transport protein MFS_3 PF05977.13 gi|73670057|ref|YP_306072.1| - 0.013 13.9 10.2 0.018 13.5 10.2 1.3 1 0 0 1 1 1 0 Transmembrane secretion effector SseC PF04888.12 gi|73670057|ref|YP_306072.1| - 2.1 7.8 4.1 3.1 7.3 4.1 1.2 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family GWT1 PF06423.12 gi|73670057|ref|YP_306072.1| - 2.5 8.2 9.2 11 6.1 4.5 2.9 2 1 0 2 2 2 0 GWT1 Abhydrolase_1 PF00561.20 gi|73670058|ref|YP_306073.1| - 2.3e-11 43.8 0.0 1.1e-10 41.7 0.0 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|73670058|ref|YP_306073.1| - 8.2e-05 22.0 0.0 0.00091 18.6 0.0 2.0 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 gi|73670058|ref|YP_306073.1| - 0.00012 22.3 0.0 0.00016 21.9 0.0 1.1 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_8 PF06259.12 gi|73670058|ref|YP_306073.1| - 0.0055 16.4 0.0 0.0086 15.7 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase Abhydrolase_6 PF12697.7 gi|73670058|ref|YP_306073.1| - 0.007 17.0 0.0 0.011 16.3 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 gi|73670058|ref|YP_306073.1| - 0.037 13.6 0.0 0.3 10.6 0.0 1.9 2 0 0 2 2 2 0 Dienelactone hydrolase family FSH1 PF03959.13 gi|73670058|ref|YP_306073.1| - 0.042 13.5 0.0 0.1 12.3 0.0 1.6 2 0 0 2 2 2 0 Serine hydrolase (FSH1) DUF726 PF05277.12 gi|73670058|ref|YP_306073.1| - 0.11 11.4 0.0 0.17 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF726) GHMP_kinases_C PF08544.13 gi|73670058|ref|YP_306073.1| - 0.14 12.6 0.0 0.45 10.9 0.0 1.9 2 0 0 2 2 2 0 GHMP kinases C terminal Lipase_3 PF01764.25 gi|73670058|ref|YP_306073.1| - 0.18 11.6 0.0 0.32 10.9 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) LysE PF01810.18 gi|73670059|ref|YP_306074.1| - 9.4e-34 116.6 11.4 1.1e-33 116.3 11.4 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 gi|73670059|ref|YP_306074.1| - 0.039 13.6 8.0 0.17 11.6 5.5 2.6 1 1 1 2 2 2 0 Integral membrane protein TerC family DUF1418 PF07214.12 gi|73670059|ref|YP_306074.1| - 0.05 13.5 0.6 0.11 12.4 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) Lactonase PF10282.9 gi|73670060|ref|YP_306075.1| - 3.2e-23 82.6 7.8 2.3e-11 43.5 0.8 4.0 1 1 1 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|73670060|ref|YP_306075.1| - 3.4e-12 45.6 8.5 0.00031 19.4 0.2 4.1 1 1 3 4 4 4 4 Cytochrome D1 heme domain SGL PF08450.12 gi|73670060|ref|YP_306075.1| - 2.3e-09 37.2 8.5 0.0039 16.8 2.4 3.7 2 1 1 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region PD40 PF07676.12 gi|73670060|ref|YP_306075.1| - 2.1e-05 24.3 0.0 3.6 7.6 0.0 4.8 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Arylesterase PF01731.20 gi|73670060|ref|YP_306075.1| - 4.9e-05 23.5 11.9 1.7 8.9 0.0 6.6 2 2 5 7 7 7 1 Arylesterase NHL PF01436.21 gi|73670060|ref|YP_306075.1| - 0.0032 17.4 24.6 0.61 10.2 0.3 7.9 9 0 0 9 9 9 2 NHL repeat Thioredox_DsbH PF03190.15 gi|73670060|ref|YP_306075.1| - 0.0087 16.0 0.1 4.2 7.3 0.0 3.6 3 0 0 3 3 3 1 Protein of unknown function, DUF255 HIRA_B PF09453.10 gi|73670060|ref|YP_306075.1| - 0.5 10.3 6.5 25 4.9 0.1 4.2 4 0 0 4 4 4 0 HIRA B motif PBCV_basic_adap PF08789.10 gi|73670060|ref|YP_306075.1| - 0.62 10.2 8.4 48 4.2 0.0 5.6 6 0 0 6 6 6 0 PBCV-specific basic adaptor domain PQQ PF01011.21 gi|73670060|ref|YP_306075.1| - 2.8 8.0 17.1 0.55 10.3 0.1 5.3 5 1 0 6 6 6 0 PQQ enzyme repeat PQQ_3 PF13570.6 gi|73670060|ref|YP_306075.1| - 5.7 7.6 26.4 3 8.4 0.0 6.3 7 0 0 7 7 7 0 PQQ-like domain UPF0228 PF05727.11 gi|73670061|ref|YP_306076.1| - 1.5e-34 118.4 9.4 2e-34 118.1 8.3 1.7 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0228) Rx_N PF18052.1 gi|73670061|ref|YP_306076.1| - 0.038 14.3 0.5 3.4 8.0 0.3 2.5 2 1 0 2 2 2 0 Rx N-terminal domain HTH_19 PF12844.7 gi|73670061|ref|YP_306076.1| - 0.34 11.0 2.7 0.38 10.8 0.2 2.3 3 1 1 4 4 4 0 Helix-turn-helix domain Usp PF00582.26 gi|73670062|ref|YP_306077.1| - 8.7e-30 104.1 0.1 1e-29 103.9 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|73670062|ref|YP_306077.1| - 0.0072 16.4 0.0 0.025 14.6 0.0 1.8 1 1 0 1 1 1 1 DNA photolyase DUF2582 PF10771.9 gi|73670063|ref|YP_306078.1| - 1.4e-20 73.2 0.1 1.5e-20 73.1 0.1 1.0 1 0 0 1 1 1 1 Winged helix-turn-helix domain (DUF2582) DUF1540 PF07561.11 gi|73670063|ref|YP_306078.1| - 0.11 12.8 0.1 0.18 12.1 0.1 1.5 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1540) Fer4 PF00037.27 gi|73670064|ref|YP_306079.1| - 1.1e-34 116.8 72.3 4.5e-07 29.4 2.6 8.5 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73670064|ref|YP_306079.1| - 1.6e-28 99.1 65.1 4.2e-11 43.3 8.0 5.1 4 1 1 6 6 6 5 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73670064|ref|YP_306079.1| - 7.2e-21 74.1 65.2 6.2e-07 29.5 7.5 6.0 2 2 4 7 7 7 7 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73670064|ref|YP_306079.1| - 2e-19 69.4 62.5 0.001 19.1 7.4 7.0 7 2 0 7 7 6 6 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73670064|ref|YP_306079.1| - 5.3e-19 68.1 72.2 2.5e-05 24.3 7.3 7.0 5 2 3 8 8 8 7 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73670064|ref|YP_306079.1| - 9.7e-19 66.6 72.3 5.3e-05 23.1 2.7 8.4 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73670064|ref|YP_306079.1| - 2.5e-18 66.8 70.7 0.00086 20.2 1.0 8.0 6 3 3 9 9 7 6 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|73670064|ref|YP_306079.1| - 5.8e-12 45.0 80.0 0.00032 20.6 2.5 8.9 9 0 0 9 9 9 6 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73670064|ref|YP_306079.1| - 1.3e-10 41.5 63.7 0.00021 21.7 9.1 6.2 4 3 2 6 6 6 5 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73670064|ref|YP_306079.1| - 4.3e-08 33.6 64.8 0.037 14.6 11.1 8.0 4 2 4 8 8 8 5 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670064|ref|YP_306079.1| - 0.0058 17.0 3.7 0.0058 17.0 3.7 8.9 9 0 0 9 9 9 5 4Fe-4S binding domain Fer4_15 PF13459.6 gi|73670064|ref|YP_306079.1| - 2.8 8.8 73.9 0.3 11.9 1.4 9.5 9 2 0 9 9 9 0 4Fe-4S single cluster domain FlpD PF02662.16 gi|73670065|ref|YP_306080.1| - 1.1e-51 174.0 4.6 4.9e-50 168.7 0.1 4.0 4 0 0 4 4 4 1 Methyl-viologen-reducing hydrogenase, delta subunit Pyr_redox_2 PF07992.14 gi|73670065|ref|YP_306080.1| - 3.7e-18 65.8 0.4 1.8e-17 63.5 0.1 2.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_7 PF12838.7 gi|73670065|ref|YP_306080.1| - 2.5e-15 56.8 36.9 4.6e-05 23.9 10.5 5.7 4 2 2 6 6 6 5 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73670065|ref|YP_306080.1| - 1.1e-14 53.8 48.5 3.2e-05 23.8 2.1 6.1 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73670065|ref|YP_306080.1| - 1.3e-13 50.1 42.8 3.2e-06 26.9 2.2 6.2 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73670065|ref|YP_306080.1| - 3.5e-13 49.4 47.7 5.5e-08 32.8 11.1 6.0 7 0 0 7 7 6 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73670065|ref|YP_306080.1| - 3.7e-13 49.4 33.7 1.2e-05 25.3 0.1 5.5 4 1 2 6 6 6 4 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73670065|ref|YP_306080.1| - 9.9e-13 47.3 56.0 2.2e-07 30.4 3.6 6.3 6 1 0 6 6 5 3 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73670065|ref|YP_306080.1| - 3.9e-11 43.7 27.2 0.0014 19.6 0.1 5.6 5 0 0 5 5 5 3 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|73670065|ref|YP_306080.1| - 9.5e-11 41.7 52.8 4.1e-07 30.1 11.1 5.2 3 2 4 7 7 7 4 4Fe-4S dicluster domain DAO PF01266.24 gi|73670065|ref|YP_306080.1| - 1.1e-08 35.0 0.2 1.7e-05 24.6 0.5 2.8 3 0 0 3 3 3 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|73670065|ref|YP_306080.1| - 1.8e-07 30.8 0.0 8.8e-07 28.5 0.0 2.1 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_17 PF13534.6 gi|73670065|ref|YP_306080.1| - 4.6e-07 30.3 28.4 0.0011 19.5 3.5 4.6 4 0 0 4 4 4 3 4Fe-4S dicluster domain FAD_binding_2 PF00890.24 gi|73670065|ref|YP_306080.1| - 5.7e-07 29.0 1.0 1.1e-06 28.0 1.0 1.4 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|73670065|ref|YP_306080.1| - 7e-07 28.7 1.2 9.9e-06 24.9 0.6 2.5 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|73670065|ref|YP_306080.1| - 3.1e-06 26.8 0.3 5.7e-06 25.9 0.3 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|73670065|ref|YP_306080.1| - 4.2e-06 27.2 0.3 0.00011 22.7 0.3 2.8 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_8 PF13183.6 gi|73670065|ref|YP_306080.1| - 9.8e-06 25.9 27.6 0.027 14.9 0.0 5.5 4 1 1 5 5 5 2 4Fe-4S dicluster domain NAD_binding_8 PF13450.6 gi|73670065|ref|YP_306080.1| - 1e-05 25.7 0.0 2.3e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|73670065|ref|YP_306080.1| - 0.00012 20.9 1.9 0.00031 19.6 1.5 1.8 1 1 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|73670065|ref|YP_306080.1| - 0.00017 21.0 0.6 0.0003 20.1 0.6 1.3 1 0 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.6 gi|73670065|ref|YP_306080.1| - 0.00039 19.7 0.2 0.15 11.2 0.0 2.6 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Thi4 PF01946.17 gi|73670065|ref|YP_306080.1| - 0.00094 18.5 0.1 0.002 17.4 0.1 1.5 1 0 0 1 1 1 1 Thi4 family AlaDh_PNT_C PF01262.21 gi|73670065|ref|YP_306080.1| - 0.0024 17.2 0.1 0.0062 15.9 0.1 1.7 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Amino_oxidase PF01593.24 gi|73670065|ref|YP_306080.1| - 0.0027 17.1 0.1 0.026 13.8 0.0 2.2 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Fer4_4 PF12800.7 gi|73670065|ref|YP_306080.1| - 0.0031 17.9 32.5 0.23 12.1 1.8 5.3 4 0 0 4 4 4 2 4Fe-4S binding domain NAD_binding_7 PF13241.6 gi|73670065|ref|YP_306080.1| - 0.01 16.3 0.2 0.08 13.4 0.1 2.6 3 1 0 3 3 1 0 Putative NAD(P)-binding NAD_binding_9 PF13454.6 gi|73670065|ref|YP_306080.1| - 0.01 15.8 0.0 1.9 8.5 0.0 2.6 2 0 0 2 2 2 0 FAD-NAD(P)-binding Fer4_13 PF13370.6 gi|73670065|ref|YP_306080.1| - 0.014 15.9 28.9 0.42 11.2 2.0 4.6 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|73670065|ref|YP_306080.1| - 0.03 15.1 25.5 0.039 14.7 0.8 4.6 3 1 1 4 4 4 0 4Fe-4S single cluster domain Trp_halogenase PF04820.14 gi|73670065|ref|YP_306080.1| - 0.062 12.1 1.1 0.16 10.8 0.8 1.7 2 0 0 2 2 2 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|73670065|ref|YP_306080.1| - 0.076 12.0 0.9 1 8.3 0.6 2.6 3 0 0 3 3 3 0 Lycopene cyclase protein 3HCDH_N PF02737.18 gi|73670065|ref|YP_306080.1| - 0.15 11.9 0.6 0.34 10.8 0.6 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Fer4_22 PF17179.4 gi|73670065|ref|YP_306080.1| - 0.24 12.3 0.2 0.24 12.3 0.2 5.2 4 1 1 5 5 4 0 4Fe-4S dicluster domain DDE_Tnp_1 PF01609.21 gi|73670066|ref|YP_306081.1| - 6.4e-23 81.5 0.1 6.4e-23 81.5 0.1 1.8 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_2 PF04693.12 gi|73670066|ref|YP_306081.1| - 0.0012 18.1 0.6 0.0021 17.4 0.6 1.4 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 Y1_Tnp PF01797.16 gi|73670067|ref|YP_306082.1| - 7.3e-35 119.7 3.6 8.4e-35 119.5 3.6 1.0 1 0 0 1 1 1 1 Transposase IS200 like Acyl_transf_3 PF01757.22 gi|73670068|ref|YP_306083.1| - 8.7e-30 103.9 44.7 1.1e-28 100.3 44.7 2.0 1 1 0 1 1 1 1 Acyltransferase family CCB1 PF12046.8 gi|73670068|ref|YP_306083.1| - 0.9 8.9 4.5 1.9 7.8 4.5 1.5 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B HisKA_2 PF07568.12 gi|73670069|ref|YP_306084.1| - 1.1e-30 105.5 1.2 1.1e-30 105.5 1.2 2.8 3 0 0 3 3 3 1 Histidine kinase GAF_3 PF13492.6 gi|73670069|ref|YP_306084.1| - 2.5e-17 63.4 0.0 4.2e-17 62.7 0.0 1.4 1 0 0 1 1 1 1 GAF domain PAS_3 PF08447.12 gi|73670069|ref|YP_306084.1| - 2e-16 60.0 0.1 4.8e-16 58.8 0.1 1.7 1 0 0 1 1 1 1 PAS fold GAF_2 PF13185.6 gi|73670069|ref|YP_306084.1| - 1.5e-11 44.7 0.0 3.7e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|73670069|ref|YP_306084.1| - 5e-11 43.4 0.0 9.3e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 GAF domain HATPase_c PF02518.26 gi|73670069|ref|YP_306084.1| - 6e-10 39.6 0.1 2e-09 37.9 0.1 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|73670069|ref|YP_306084.1| - 4.8e-05 23.3 0.0 0.042 13.8 0.1 2.9 2 0 0 2 2 2 2 PAS fold HATPase_c_2 PF13581.6 gi|73670069|ref|YP_306084.1| - 0.0027 17.7 0.0 0.0059 16.6 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|73670069|ref|YP_306084.1| - 0.005 17.5 0.9 0.013 16.1 0.1 2.2 2 0 0 2 2 2 1 HWE histidine kinase LMBR1 PF04791.16 gi|73670069|ref|YP_306084.1| - 0.078 11.9 1.2 0.12 11.3 1.2 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein PAS_9 PF13426.7 gi|73670069|ref|YP_306084.1| - 0.11 12.8 1.9 0.33 11.2 0.2 2.8 3 1 0 3 3 3 0 PAS domain SSXT PF05030.12 gi|73670069|ref|YP_306084.1| - 0.29 10.8 2.3 1.5 8.5 0.1 2.7 2 0 0 2 2 2 0 SSXT protein (N-terminal region) OmpH PF03938.14 gi|73670069|ref|YP_306084.1| - 9.2 6.6 9.8 1.8 8.9 0.3 2.8 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) Y1_Tnp PF01797.16 gi|73670070|ref|YP_306085.1| - 2.2e-34 118.2 2.1 3e-34 117.7 2.1 1.2 1 0 0 1 1 1 1 Transposase IS200 like Peptidase_M44 PF03410.13 gi|73670070|ref|YP_306085.1| - 0.016 13.8 0.0 0.019 13.6 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox Pox_A11 PF05061.13 gi|73670071|ref|YP_306086.1| - 0.13 11.5 0.2 0.18 11.1 0.2 1.1 1 0 0 1 1 1 0 Poxvirus A11 Protein TPR_12 PF13424.6 gi|73670072|ref|YP_306087.1| - 1.3e-124 406.7 37.2 9.8e-19 67.4 0.2 6.4 1 1 7 9 9 9 9 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670072|ref|YP_306087.1| - 2.6e-64 208.6 10.2 5.3e-06 26.1 0.0 10.7 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670072|ref|YP_306087.1| - 1.3e-62 202.9 26.4 2.3e-06 27.3 0.1 11.1 11 0 0 11 11 10 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73670072|ref|YP_306087.1| - 8.5e-50 164.6 40.5 1.5e-05 24.6 0.1 10.8 11 0 0 11 11 10 8 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670072|ref|YP_306087.1| - 7.8e-47 155.9 14.9 0.00036 20.3 0.0 9.9 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670072|ref|YP_306087.1| - 2.3e-41 136.5 36.4 0.00038 20.4 0.2 10.8 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670072|ref|YP_306087.1| - 2.4e-35 119.9 36.1 7.1e-05 22.4 0.2 10.4 10 0 0 10 10 10 8 TPR repeat CHAT PF12770.7 gi|73670072|ref|YP_306087.1| - 4.4e-34 118.2 0.0 6.6e-34 117.6 0.0 1.2 1 0 0 1 1 1 1 CHAT domain SHNi-TPR PF10516.9 gi|73670072|ref|YP_306087.1| - 4.1e-29 99.7 10.3 0.0091 15.4 0.0 8.6 8 0 0 8 8 8 8 SHNi-TPR TPR_16 PF13432.6 gi|73670072|ref|YP_306087.1| - 9e-28 96.7 0.0 0.61 10.8 0.0 9.6 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73670072|ref|YP_306087.1| - 3.1e-26 92.5 14.3 6.7e-10 38.9 1.5 3.9 1 1 3 4 4 4 3 MalT-like TPR region TPR_6 PF13174.6 gi|73670072|ref|YP_306087.1| - 9.1e-24 82.5 9.0 0.66 10.7 0.0 10.3 10 0 0 10 10 9 6 Tetratricopeptide repeat MIT PF04212.18 gi|73670072|ref|YP_306087.1| - 1e-19 70.3 19.6 1.1 9.4 0.1 9.7 9 0 0 9 9 9 8 MIT (microtubule interacting and transport) domain SNAP PF14938.6 gi|73670072|ref|YP_306087.1| - 1.4e-16 60.8 13.7 2.2e-06 27.3 3.1 4.5 1 1 3 4 4 4 4 Soluble NSF attachment protein, SNAP DUF627 PF04781.12 gi|73670072|ref|YP_306087.1| - 1e-15 57.6 16.2 1.4 9.0 0.0 9.0 4 3 4 8 8 8 7 Protein of unknown function (DUF627) TPR_14 PF13428.6 gi|73670072|ref|YP_306087.1| - 1.5e-15 56.6 0.0 8 7.6 0.0 9.6 9 0 0 9 9 9 0 Tetratricopeptide repeat TPR_4 PF07721.14 gi|73670072|ref|YP_306087.1| - 3.3e-15 55.1 0.0 16 6.5 0.0 8.5 8 0 0 8 8 8 0 Tetratricopeptide repeat ANAPC5 PF12862.7 gi|73670072|ref|YP_306087.1| - 4.2e-14 52.4 1.4 0.19 11.8 0.1 7.0 1 1 4 5 5 5 3 Anaphase-promoting complex subunit 5 TPR_17 PF13431.6 gi|73670072|ref|YP_306087.1| - 2e-13 49.7 10.2 14 6.4 0.0 10.3 10 0 0 10 10 10 0 Tetratricopeptide repeat RPN7 PF10602.9 gi|73670072|ref|YP_306087.1| - 1.8e-12 47.4 19.2 0.00011 22.0 1.2 5.3 1 1 3 5 5 5 4 26S proteasome subunit RPN7 TPR_3 PF07720.12 gi|73670072|ref|YP_306087.1| - 1.3e-11 44.3 29.2 3.3 7.8 0.0 9.9 10 0 0 10 10 9 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670072|ref|YP_306087.1| - 1.1e-10 41.9 8.7 0.087 13.4 0.1 6.3 3 2 3 7 7 6 4 Tetratricopeptide repeat Enolase_C PF00113.22 gi|73670072|ref|YP_306087.1| - 8.3e-10 38.4 17.8 0.84 8.8 0.0 8.4 1 1 7 8 8 8 3 Enolase, C-terminal TIM barrel domain Fis1_TPR_C PF14853.6 gi|73670072|ref|YP_306087.1| - 5.6e-09 35.9 12.1 2.4 8.3 0.0 8.8 8 0 0 8 8 8 1 Fis1 C-terminal tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670072|ref|YP_306087.1| - 2.3e-06 27.7 19.0 0.68 10.2 0.6 8.2 2 1 6 8 8 8 2 Anaphase-promoting complex, cyclosome, subunit 3 HemY_N PF07219.13 gi|73670072|ref|YP_306087.1| - 3.9e-06 27.0 8.0 66 3.8 0.0 7.9 1 1 7 8 8 8 0 HemY protein N-terminus SPO22 PF08631.10 gi|73670072|ref|YP_306087.1| - 1.3e-05 24.8 5.0 0.8 9.1 0.4 6.1 4 2 1 5 5 5 1 Meiosis protein SPO22/ZIP4 like Rapsyn_N PF10579.9 gi|73670072|ref|YP_306087.1| - 3.5e-05 23.8 18.3 3.9 7.6 0.6 6.4 3 2 4 7 7 7 1 Rapsyn N-terminal myristoylation and linker region NB-ARC PF00931.22 gi|73670072|ref|YP_306087.1| - 5.3e-05 22.5 0.0 0.00022 20.5 0.0 2.1 1 0 0 1 1 1 1 NB-ARC domain NACHT PF05729.12 gi|73670072|ref|YP_306087.1| - 6.3e-05 23.0 0.0 0.00015 21.7 0.0 1.6 1 0 0 1 1 1 1 NACHT domain Imm31 PF15591.6 gi|73670072|ref|YP_306087.1| - 0.00045 20.0 4.2 50 3.8 0.0 6.5 2 2 4 6 6 6 0 Immunity protein 31 AAA_22 PF13401.6 gi|73670072|ref|YP_306087.1| - 0.00078 19.7 0.0 0.0025 18.1 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_16 PF13191.6 gi|73670072|ref|YP_306087.1| - 0.0021 18.5 0.4 0.0079 16.6 0.4 2.0 1 1 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 gi|73670072|ref|YP_306087.1| - 0.005 16.8 3.9 0.0057 16.6 0.3 3.0 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea DUF2225 PF09986.9 gi|73670072|ref|YP_306087.1| - 0.0081 15.9 19.8 0.21 11.3 1.6 3.9 1 1 4 5 5 5 3 Uncharacterized protein conserved in bacteria (DUF2225) TusA PF01206.17 gi|73670072|ref|YP_306087.1| - 0.026 14.3 0.0 0.091 12.6 0.0 1.9 1 0 0 1 1 1 0 Sulfurtransferase TusA LemA PF04011.12 gi|73670072|ref|YP_306087.1| - 0.081 12.8 17.1 1.2e+02 2.5 0.0 8.2 9 0 0 9 9 8 0 LemA family Peptidase_M13 PF01431.21 gi|73670072|ref|YP_306087.1| - 0.18 11.4 14.0 3.4 7.2 1.5 3.9 2 1 1 4 4 4 0 Peptidase family M13 DUF4810 PF16068.5 gi|73670072|ref|YP_306087.1| - 1.4 9.5 32.2 0.65 10.6 2.1 7.3 6 1 0 7 7 6 0 Domain of unknown function (DUF4810) V-ATPase_H_C PF11698.8 gi|73670072|ref|YP_306087.1| - 1.4 9.0 14.4 3.9 7.6 0.0 6.1 4 2 2 7 7 6 0 V-ATPase subunit H 7tm_1 PF00001.21 gi|73670073|ref|YP_306088.1| - 0.086 12.1 0.2 0.11 11.9 0.2 1.1 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) BatD PF13584.6 gi|73670073|ref|YP_306088.1| - 0.12 11.1 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF5423 PF17461.2 gi|73670073|ref|YP_306088.1| - 0.13 11.1 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Tom5 PF10642.9 gi|73670073|ref|YP_306088.1| - 0.4 10.8 0.1 0.4 10.8 0.1 2.3 3 0 0 3 3 3 0 Mitochondrial import receptor subunit or translocase AA_permease_2 PF13520.6 gi|73670074|ref|YP_306089.1| - 7.2e-27 94.3 48.5 8.9e-27 94.0 48.5 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|73670074|ref|YP_306089.1| - 1.1e-21 77.1 42.7 1.6e-21 76.5 42.7 1.1 1 0 0 1 1 1 1 Amino acid permease SET PF00856.28 gi|73670075|ref|YP_306090.1| - 1e-11 45.5 2.8 4e-10 40.3 2.8 2.1 1 1 0 1 1 1 1 SET domain zf-C3Hc3H PF13891.6 gi|73670075|ref|YP_306090.1| - 0.037 14.4 0.8 0.087 13.2 0.8 1.6 1 0 0 1 1 1 0 Potential DNA-binding domain Peptidase_M50 PF02163.22 gi|73670076|ref|YP_306091.1| - 0.34 10.1 3.6 0.67 9.2 0.1 2.4 2 0 0 2 2 2 0 Peptidase family M50 Peptidase_M48 PF01435.18 gi|73670078|ref|YP_306093.1| - 3.4e-05 23.7 0.0 0.00012 21.9 0.0 1.9 1 1 0 1 1 1 1 Peptidase family M48 TPR_1 PF00515.28 gi|73670079|ref|YP_306094.1| - 3.4e-237 757.8 87.8 4.9e-13 48.3 0.1 24.8 24 1 1 25 25 25 23 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670079|ref|YP_306094.1| - 1.2e-199 630.8 64.8 1.2e-09 37.5 0.3 24.4 24 1 1 25 25 25 23 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670079|ref|YP_306094.1| - 7.5e-181 571.7 85.6 9.3e-10 37.9 0.1 23.7 24 0 0 24 24 23 23 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670079|ref|YP_306094.1| - 4.4e-178 576.8 118.2 2.3e-12 46.4 1.3 24.1 3 3 21 24 24 24 22 TPR repeat TPR_17 PF13431.6 gi|73670079|ref|YP_306094.1| - 2.6e-152 484.7 82.4 6.3e-08 32.5 0.3 24.6 25 0 0 25 25 25 22 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670079|ref|YP_306094.1| - 2.2e-125 409.1 0.0 2.5e-14 53.7 0.0 14.5 8 4 9 17 17 17 16 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670079|ref|YP_306094.1| - 1.2e-111 355.7 0.1 1.1e-06 29.0 0.0 22.9 2 1 22 24 24 22 20 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670079|ref|YP_306094.1| - 4.5e-103 337.7 75.5 1.5e-08 34.8 0.0 17.1 1 1 21 22 22 22 22 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670079|ref|YP_306094.1| - 1.3e-85 281.8 28.1 1.9e-08 34.7 0.1 14.1 7 3 10 17 17 17 16 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670079|ref|YP_306094.1| - 7.1e-80 257.4 22.7 0.00012 21.9 0.0 24.0 21 2 3 24 24 24 12 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670079|ref|YP_306094.1| - 1.3e-75 249.5 0.0 2.5e-06 27.5 0.0 15.2 6 3 13 19 19 19 18 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670079|ref|YP_306094.1| - 4.1e-54 180.7 33.6 1.6e-07 31.4 0.6 9.9 7 4 4 11 11 11 10 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|73670079|ref|YP_306094.1| - 1.3e-49 163.6 30.8 0.00041 20.8 0.3 21.7 23 0 0 23 23 21 7 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670079|ref|YP_306094.1| - 9.5e-45 149.3 57.6 0.004 17.0 0.1 23.0 24 0 0 24 24 24 11 Tetratricopeptide repeat DUF3856 PF12968.7 gi|73670079|ref|YP_306094.1| - 4.3e-32 111.1 27.0 0.061 13.4 0.1 18.2 1 1 14 16 16 16 9 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.6 gi|73670079|ref|YP_306094.1| - 1.1e-29 102.2 41.7 0.046 13.8 0.1 20.6 21 1 1 22 22 22 4 Fis1 C-terminal tetratricopeptide repeat BTAD PF03704.17 gi|73670079|ref|YP_306094.1| - 1.9e-29 103.0 2.7 0.083 13.3 0.1 10.9 3 3 7 13 13 13 9 Bacterial transcriptional activator domain NARP1 PF12569.8 gi|73670079|ref|YP_306094.1| - 4.4e-29 101.8 26.0 5e-06 25.7 0.1 10.8 1 1 10 12 12 12 9 NMDA receptor-regulated protein 1 MIT PF04212.18 gi|73670079|ref|YP_306094.1| - 8.1e-17 61.1 95.4 0.2 11.7 0.4 20.4 19 3 3 22 22 22 7 MIT (microtubule interacting and transport) domain TPR_15 PF13429.6 gi|73670079|ref|YP_306094.1| - 1.6e-14 53.8 25.3 0.028 13.6 0.1 8.8 2 2 6 9 9 9 4 Tetratricopeptide repeat TPR_21 PF09976.9 gi|73670079|ref|YP_306094.1| - 2.3e-14 53.6 33.7 0.012 15.3 1.0 12.1 4 3 8 12 12 12 3 Tetratricopeptide repeat-like domain SHNi-TPR PF10516.9 gi|73670079|ref|YP_306094.1| - 2.3e-14 52.6 29.5 0.77 9.3 0.1 16.8 18 0 0 18 18 18 2 SHNi-TPR TPR_3 PF07720.12 gi|73670079|ref|YP_306094.1| - 1.3e-13 50.6 49.0 0.21 11.6 0.0 17.0 20 0 0 20 20 17 5 Tetratricopeptide repeat PPR PF01535.20 gi|73670079|ref|YP_306094.1| - 3e-12 45.9 19.9 5.1 7.6 0.0 15.7 18 0 0 18 18 16 0 PPR repeat Alkyl_sulf_dimr PF14863.6 gi|73670079|ref|YP_306094.1| - 2.1e-11 44.4 21.9 0.3 11.5 0.0 9.7 4 3 4 10 10 10 2 Alkyl sulfatase dimerisation ANAPC5 PF12862.7 gi|73670079|ref|YP_306094.1| - 5.4e-11 42.4 23.4 1 9.5 0.0 14.9 9 5 8 17 17 17 1 Anaphase-promoting complex subunit 5 RPN7 PF10602.9 gi|73670079|ref|YP_306094.1| - 1.4e-08 34.6 30.2 0.76 9.5 0.2 13.2 4 3 9 16 16 16 1 26S proteasome subunit RPN7 DUF627 PF04781.12 gi|73670079|ref|YP_306094.1| - 5.7e-08 32.7 6.8 0.62 10.1 0.1 8.6 9 4 0 9 9 6 1 Protein of unknown function (DUF627) Rota_NSP3 PF01665.16 gi|73670079|ref|YP_306094.1| - 7.8e-08 31.8 32.5 0.2 10.8 0.7 12.6 1 1 12 15 15 15 2 Rotavirus non-structural protein NSP3 TPR_20 PF14561.6 gi|73670079|ref|YP_306094.1| - 1.1e-07 32.1 15.8 2.7 8.4 0.1 10.4 4 3 8 14 14 13 1 Tetratricopeptide repeat Wzy_C_2 PF11846.8 gi|73670079|ref|YP_306094.1| - 2e-07 31.1 14.6 1.4e-05 25.1 0.3 6.3 6 1 2 8 8 7 1 Virulence factor membrane-bound polymerase, C-terminal DUF1510 PF07423.11 gi|73670079|ref|YP_306094.1| - 4.9e-07 29.8 41.9 10 6.3 0.1 15.9 7 4 11 19 19 18 0 Domain of unknown function (DUF1510) Coatomer_E PF04733.14 gi|73670079|ref|YP_306094.1| - 1.7e-05 24.4 18.9 0.19 11.1 0.1 7.3 3 2 4 8 8 8 2 Coatomer epsilon subunit NRBF2_MIT PF17169.4 gi|73670079|ref|YP_306094.1| - 2.3e-05 24.5 24.4 1.1e+02 3.2 0.0 14.6 13 5 6 19 19 16 0 MIT domain of nuclear receptor-binding factor 2 DUF4271 PF14093.6 gi|73670079|ref|YP_306094.1| - 0.00062 19.7 7.7 0.00099 19.1 7.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4271) HTH_ParB PF17762.1 gi|73670079|ref|YP_306094.1| - 0.0012 18.6 0.8 35 4.3 0.0 6.4 6 0 0 6 6 6 0 HTH domain found in ParB protein Rapsyn_N PF10579.9 gi|73670079|ref|YP_306094.1| - 0.0025 17.9 12.1 86 3.3 0.0 9.1 8 2 4 12 12 9 0 Rapsyn N-terminal myristoylation and linker region NdhM PF10664.9 gi|73670079|ref|YP_306094.1| - 0.0082 16.4 19.2 31 4.9 0.0 10.9 8 5 5 13 13 12 0 Cyanobacterial and plastid NDH-1 subunit M Oxidored_q3 PF00499.20 gi|73670079|ref|YP_306094.1| - 0.0096 15.6 0.2 0.016 14.9 0.2 1.3 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ChAPs PF09295.10 gi|73670079|ref|YP_306094.1| - 0.032 13.2 14.2 2.6 7.0 0.0 5.8 4 2 0 6 6 6 0 ChAPs (Chs5p-Arf1p-binding proteins) TruB_N PF01509.18 gi|73670079|ref|YP_306094.1| - 0.08 13.3 0.3 2e+02 2.3 0.0 4.9 5 1 1 6 6 5 0 TruB family pseudouridylate synthase (N terminal domain) AgrB PF04647.15 gi|73670079|ref|YP_306094.1| - 0.22 10.8 7.6 0.31 10.3 7.6 1.2 1 0 0 1 1 1 0 Accessory gene regulator B Sda PF08970.10 gi|73670079|ref|YP_306094.1| - 0.32 10.8 26.0 56 3.6 0.0 11.6 14 0 0 14 14 12 0 Sporulation inhibitor A Sel1 PF08238.12 gi|73670079|ref|YP_306094.1| - 1.1 10.0 10.2 28 5.6 0.0 6.5 6 0 0 6 6 3 0 Sel1 repeat HTH_Bact PF18768.1 gi|73670079|ref|YP_306094.1| - 2.1 8.0 65.0 13 5.5 1.2 18.9 20 2 2 22 22 20 0 Helix-turn-helix bacterial domain FKS1_dom1 PF14288.6 gi|73670079|ref|YP_306094.1| - 2.4 8.5 6.0 29 5.0 0.1 4.7 2 2 1 4 4 4 0 1,3-beta-glucan synthase subunit FKS1, domain-1 DHHC PF01529.20 gi|73670079|ref|YP_306094.1| - 7.1 6.7 8.4 13 5.9 8.4 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Aminotran_1_2 PF00155.21 gi|73670080|ref|YP_306095.1| - 1.6e-60 205.3 0.0 1.8e-60 205.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|73670080|ref|YP_306095.1| - 0.00026 19.7 0.0 0.00039 19.1 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DUF2148 PF09918.9 gi|73670081|ref|YP_306096.1| - 1.1e-31 108.6 1.3 1.1e-31 108.6 1.3 1.6 2 0 0 2 2 2 1 Uncharacterized protein containing a ferredoxin domain (DUF2148) FeS PF04060.13 gi|73670081|ref|YP_306096.1| - 0.0013 18.3 2.0 0.0032 17.1 2.0 1.7 1 0 0 1 1 1 1 Putative Fe-S cluster zf-RING_4 PF14570.6 gi|73670081|ref|YP_306096.1| - 0.031 14.1 0.1 0.052 13.3 0.1 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain CrtC PF07143.11 gi|73670082|ref|YP_306097.1| - 2.2e-08 35.0 0.4 2.2e-07 31.7 0.1 2.2 2 0 0 2 2 2 1 CrtC N-terminal lipocalin domain Lipocalin_9 PF17186.4 gi|73670082|ref|YP_306097.1| - 0.00021 21.6 0.1 0.0006 20.1 0.0 1.8 2 0 0 2 2 2 1 Lipocalin-like domain Beta-Casp PF10996.8 gi|73670083|ref|YP_306098.1| - 8.9e-15 54.9 0.0 9.2e-14 51.7 0.0 2.1 2 0 0 2 2 2 1 Beta-Casp domain RMMBL PF07521.12 gi|73670083|ref|YP_306098.1| - 7.9e-13 48.1 0.0 2.3e-11 43.5 0.0 2.4 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|73670083|ref|YP_306098.1| - 5.3e-07 29.3 0.0 9.2e-07 28.6 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|73670083|ref|YP_306098.1| - 2.6e-05 23.7 0.0 0.00024 20.6 0.0 2.3 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|73670083|ref|YP_306098.1| - 4.3e-05 23.6 0.2 0.00012 22.1 0.2 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|73670083|ref|YP_306098.1| - 0.00074 19.4 0.0 0.0029 17.5 0.0 1.9 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Cas_Cas7 PF05107.12 gi|73670083|ref|YP_306098.1| - 0.018 14.6 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein Cas7 CHAT PF12770.7 gi|73670084|ref|YP_306099.1| - 3.1e-12 46.5 0.0 3.8e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 CHAT domain TusA PF01206.17 gi|73670084|ref|YP_306099.1| - 0.00039 20.2 0.0 0.00071 19.4 0.0 1.5 1 0 0 1 1 1 1 Sulfurtransferase TusA Raptor_N PF14538.6 gi|73670084|ref|YP_306099.1| - 0.0011 19.0 0.0 0.0012 18.8 0.0 1.2 1 0 0 1 1 1 1 Raptor N-terminal CASPase like domain MINDY_DUB PF04424.13 gi|73670084|ref|YP_306099.1| - 0.03 14.3 0.4 0.044 13.8 0.4 1.6 1 1 0 1 1 1 0 MINDY deubiquitinase CHAT PF12770.7 gi|73670085|ref|YP_306100.1| - 3.3e-06 26.8 0.0 3.3e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 CHAT domain DUF2769 PF10967.8 gi|73670088|ref|YP_306103.1| - 7.8e-08 32.9 14.0 3.2e-06 27.7 14.4 2.4 1 1 1 2 2 2 2 Protein of unknown function (DUF2769) Whib PF02467.16 gi|73670088|ref|YP_306103.1| - 0.57 10.8 7.4 1.6 9.4 0.6 2.5 2 1 0 2 2 2 0 Transcription factor WhiB ParA PF10609.9 gi|73670089|ref|YP_306104.1| - 4.5e-91 304.7 0.1 5.4e-91 304.4 0.1 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|73670089|ref|YP_306104.1| - 5.3e-15 55.6 0.0 1.6e-14 54.1 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|73670089|ref|YP_306104.1| - 6.5e-08 32.7 0.3 1.1e-06 28.7 0.3 2.2 1 1 0 1 1 1 1 AAA domain Fer4_NifH PF00142.18 gi|73670089|ref|YP_306104.1| - 4.8e-07 29.5 0.4 0.00022 20.8 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.11 gi|73670089|ref|YP_306104.1| - 4.4e-06 26.2 0.0 1.1e-05 24.8 0.0 1.6 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|73670089|ref|YP_306104.1| - 6e-06 25.7 0.1 1.5e-05 24.4 0.0 1.7 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_25 PF13481.6 gi|73670089|ref|YP_306104.1| - 0.00079 19.1 0.0 0.0014 18.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain CLP1_P PF16575.5 gi|73670089|ref|YP_306104.1| - 0.0016 18.2 0.0 0.0026 17.6 0.0 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop MeaB PF03308.16 gi|73670089|ref|YP_306104.1| - 0.0027 16.8 0.2 0.013 14.5 0.1 1.9 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB APS_kinase PF01583.20 gi|73670089|ref|YP_306104.1| - 0.016 15.1 0.1 0.026 14.4 0.1 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase CBP_BcsQ PF06564.12 gi|73670089|ref|YP_306104.1| - 0.029 13.9 0.4 0.13 11.7 0.1 2.0 3 0 0 3 3 3 0 Cellulose biosynthesis protein BcsQ RsgA_GTPase PF03193.16 gi|73670089|ref|YP_306104.1| - 0.03 14.2 0.0 0.051 13.5 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase SRP54 PF00448.22 gi|73670089|ref|YP_306104.1| - 0.042 13.5 0.1 0.068 12.8 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_26 PF13500.6 gi|73670089|ref|YP_306104.1| - 0.049 13.4 1.7 2.2 8.0 0.1 2.2 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|73670089|ref|YP_306104.1| - 0.067 12.4 2.0 0.071 12.3 0.3 1.7 2 0 0 2 2 2 0 NB-ARC domain IstB_IS21 PF01695.17 gi|73670089|ref|YP_306104.1| - 0.072 12.8 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Cytochrom_B559 PF00283.19 gi|73670089|ref|YP_306104.1| - 0.073 12.5 0.6 0.15 11.5 0.6 1.5 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits RNA_helicase PF00910.22 gi|73670089|ref|YP_306104.1| - 0.16 12.4 0.3 3.7 8.0 0.1 2.2 2 0 0 2 2 2 0 RNA helicase AzlC PF03591.14 gi|73670090|ref|YP_306105.1| - 7.4e-42 143.0 9.0 7.4e-42 143.0 9.0 1.7 2 0 0 2 2 2 1 AzlC protein CLN3 PF02487.17 gi|73670090|ref|YP_306105.1| - 0.0039 16.3 0.8 0.0039 16.3 0.8 1.7 2 0 0 2 2 2 1 CLN3 protein OSTbeta PF15048.6 gi|73670090|ref|YP_306105.1| - 0.03 14.5 7.1 0.056 13.6 7.1 1.4 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein Neur_chan_memb PF02932.16 gi|73670090|ref|YP_306105.1| - 0.037 14.1 1.6 0.05 13.7 1.6 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CBP_BcsG PF11658.8 gi|73670090|ref|YP_306105.1| - 0.047 12.1 1.4 0.063 11.7 1.4 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG SID-1_RNA_chan PF13965.6 gi|73670090|ref|YP_306105.1| - 0.1 11.0 1.0 0.14 10.5 1.0 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Presenilin PF01080.17 gi|73670090|ref|YP_306105.1| - 0.15 10.8 9.7 0.25 10.0 9.7 1.3 1 0 0 1 1 1 0 Presenilin DDHD PF02862.17 gi|73670090|ref|YP_306105.1| - 0.16 12.1 4.3 0.26 11.4 4.3 1.3 1 0 0 1 1 1 0 DDHD domain Connexin PF00029.19 gi|73670090|ref|YP_306105.1| - 0.17 11.6 5.7 0.27 11.0 5.7 1.3 1 0 0 1 1 1 0 Connexin V_ATPase_I PF01496.19 gi|73670090|ref|YP_306105.1| - 0.2 9.5 8.0 0.4 8.5 6.8 1.8 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family FAM176 PF14851.6 gi|73670090|ref|YP_306105.1| - 0.24 11.1 3.4 0.39 10.4 3.4 1.3 1 0 0 1 1 1 0 FAM176 family EOS1 PF12326.8 gi|73670090|ref|YP_306105.1| - 0.26 11.2 1.4 0.45 10.4 1.4 1.5 1 0 0 1 1 1 0 N-glycosylation protein GRP PF07172.11 gi|73670090|ref|YP_306105.1| - 1.1 10.0 4.8 8.7 7.1 4.8 2.3 1 1 0 1 1 1 0 Glycine rich protein family Ureide_permease PF07168.11 gi|73670090|ref|YP_306105.1| - 1.7 7.4 8.8 0.18 10.6 3.7 1.9 2 1 0 2 2 2 0 Ureide permease NPR3 PF03666.13 gi|73670090|ref|YP_306105.1| - 3.1 6.5 13.7 4.2 6.1 13.7 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF2828 PF11443.8 gi|73670090|ref|YP_306105.1| - 3.7 5.5 12.6 5 5.1 12.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) SHR3_chaperone PF08229.11 gi|73670090|ref|YP_306105.1| - 3.8 6.4 7.3 16 4.4 7.2 2.0 1 1 0 1 1 1 0 ER membrane protein SH3 DUF4834 PF16118.5 gi|73670090|ref|YP_306105.1| - 3.8 8.5 14.9 11 7.0 14.7 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) NEMP PF10225.9 gi|73670090|ref|YP_306105.1| - 5.4 6.6 9.7 0.3 10.7 3.9 1.8 2 1 0 2 2 2 0 NEMP family AzlD PF05437.12 gi|73670091|ref|YP_306106.1| - 4.5e-21 74.9 9.0 5e-21 74.7 9.0 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) NIR_SIR PF01077.22 gi|73670092|ref|YP_306107.1| - 8.4e-34 116.4 0.2 1.2e-33 115.9 0.2 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|73670092|ref|YP_306107.1| - 5.2e-19 67.9 0.0 1e-18 66.9 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4 PF00037.27 gi|73670092|ref|YP_306107.1| - 5.6e-14 51.3 15.1 5.5e-07 29.1 2.7 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73670092|ref|YP_306107.1| - 1.9e-08 34.8 26.2 8.6e-07 29.5 11.9 2.7 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73670092|ref|YP_306107.1| - 4.1e-08 33.2 17.9 0.00031 20.8 4.9 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73670092|ref|YP_306107.1| - 4.4e-08 32.9 19.4 8.2e-05 22.5 2.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73670092|ref|YP_306107.1| - 2.5e-06 27.5 12.3 2.5e-06 27.5 12.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73670092|ref|YP_306107.1| - 6.6e-06 26.1 12.9 6.6e-06 26.1 12.9 2.2 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73670092|ref|YP_306107.1| - 2.7e-05 24.0 19.6 0.0017 18.4 2.7 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73670092|ref|YP_306107.1| - 0.00048 20.5 9.4 0.065 13.7 0.2 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670092|ref|YP_306107.1| - 0.0052 17.2 13.3 0.023 15.2 3.9 3.7 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73670092|ref|YP_306107.1| - 0.027 15.4 18.5 0.041 14.8 3.5 3.0 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|73670092|ref|YP_306107.1| - 0.044 14.5 0.6 0.044 14.5 0.6 4.2 4 2 0 4 4 4 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|73670092|ref|YP_306107.1| - 0.059 14.3 3.8 0.059 14.3 3.8 3.8 5 0 0 5 5 3 0 4Fe-4S binding domain DUF561 PF04481.12 gi|73670092|ref|YP_306107.1| - 0.067 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Fer4_18 PF13746.6 gi|73670092|ref|YP_306107.1| - 0.74 10.0 10.5 1.8 8.8 10.5 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|73670092|ref|YP_306107.1| - 3.2 8.6 15.4 3.5 8.5 2.7 2.8 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73670092|ref|YP_306107.1| - 5 7.7 19.7 3.2 8.4 2.2 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73670092|ref|YP_306107.1| - 5.7 7.6 22.0 1.6 9.4 3.4 3.8 3 1 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Gcd10p PF04189.13 gi|73670093|ref|YP_306108.1| - 0.034 13.3 1.6 0.049 12.7 1.0 1.4 1 1 1 2 2 2 0 Gcd10p family CxC1 PF18802.1 gi|73670093|ref|YP_306108.1| - 2.1 8.5 7.0 0.67 10.1 0.4 2.3 2 1 0 2 2 2 0 CxC1 like cysteine cluster associated with KDZ transposases Peptidase_M50 PF02163.22 gi|73670094|ref|YP_306109.1| - 1.5e-15 57.2 8.9 1.8e-08 34.0 0.4 3.0 1 1 1 2 2 2 2 Peptidase family M50 Peptidase_M50B PF13398.6 gi|73670094|ref|YP_306109.1| - 4.4e-07 29.7 3.5 4.4e-07 29.7 3.5 1.9 1 1 0 2 2 2 1 Peptidase M50B-like TetR_C_17 PF17922.1 gi|73670094|ref|YP_306109.1| - 0.016 15.3 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF308 PF03729.13 gi|73670094|ref|YP_306109.1| - 1.9 8.9 11.9 2.2 8.7 0.2 3.7 4 0 0 4 4 4 0 Short repeat of unknown function (DUF308) AAA_22 PF13401.6 gi|73670095|ref|YP_306110.1| - 0.16 12.3 0.0 0.56 10.5 0.0 2.0 1 0 0 1 1 1 0 AAA domain DUF2173 PF09941.9 gi|73670097|ref|YP_306112.1| - 1.3e-33 115.5 0.3 1.4e-33 115.3 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2173) Robl_LC7 PF03259.17 gi|73670097|ref|YP_306112.1| - 0.1 12.4 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Roadblock/LC7 domain PTPS PF01242.19 gi|73670099|ref|YP_306114.1| - 2.2e-33 114.9 0.2 2.4e-33 114.7 0.2 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase LPG_synthase_TM PF03706.13 gi|73670100|ref|YP_306115.1| - 1.9e-21 76.9 37.5 2.4e-21 76.6 37.5 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region DUF1294 PF06961.13 gi|73670101|ref|YP_306116.1| - 5.1e-22 77.9 0.1 6.8e-22 77.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1294) DSPc PF00782.20 gi|73670102|ref|YP_306117.1| - 2e-05 24.4 0.0 2.3e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 gi|73670102|ref|YP_306117.1| - 0.00041 20.4 0.0 0.00053 20.0 0.0 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 gi|73670102|ref|YP_306117.1| - 0.00076 19.1 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DiS_P_DiS PF06750.13 gi|73670103|ref|YP_306118.1| - 0.00014 21.9 1.8 0.21 11.8 0.1 3.2 3 0 0 3 3 3 2 Bacterial Peptidase A24 N-terminal domain C1_1 PF00130.22 gi|73670103|ref|YP_306118.1| - 0.00034 20.4 9.1 0.066 13.1 1.2 2.6 2 1 0 2 2 2 2 Phorbol esters/diacylglycerol binding domain (C1 domain) UPF0242 PF06785.11 gi|73670103|ref|YP_306118.1| - 0.0047 17.1 1.3 0.0093 16.1 1.3 1.5 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Cdc13_OB4_dimer PF18233.1 gi|73670103|ref|YP_306118.1| - 0.012 15.8 0.1 0.024 14.8 0.1 1.5 1 0 0 1 1 1 0 Cdc13 OB4 dimerization domain DZR PF12773.7 gi|73670103|ref|YP_306118.1| - 0.019 15.0 8.6 0.62 10.1 3.9 2.8 1 1 1 2 2 2 0 Double zinc ribbon CpXC PF14353.6 gi|73670103|ref|YP_306118.1| - 0.036 14.1 7.5 0.21 11.7 0.8 3.1 1 1 2 3 3 3 0 CpXC protein DUF2387 PF09526.10 gi|73670103|ref|YP_306118.1| - 0.041 14.0 6.1 0.49 10.6 2.4 2.6 1 1 1 2 2 2 0 Probable metal-binding protein (DUF2387) RNA_POL_M_15KD PF02150.16 gi|73670103|ref|YP_306118.1| - 0.088 12.7 0.5 0.088 12.7 0.5 3.7 4 0 0 4 4 4 0 RNA polymerases M/15 Kd subunit Lar_restr_allev PF14354.6 gi|73670103|ref|YP_306118.1| - 0.14 12.6 9.0 0.78 10.2 3.1 2.9 1 1 1 2 2 2 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.6 gi|73670103|ref|YP_306118.1| - 0.45 10.3 20.2 2.2 8.1 1.8 4.4 4 0 0 4 4 4 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|73670103|ref|YP_306118.1| - 0.91 9.3 15.9 2 8.2 0.3 3.9 4 0 0 4 4 4 0 Rubredoxin metal binding domain zf-C4_Topoisom PF01396.19 gi|73670103|ref|YP_306118.1| - 1.1 9.1 6.4 2.5 7.9 0.1 3.1 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger A2L_zn_ribbon PF08792.10 gi|73670103|ref|YP_306118.1| - 1.3 8.8 13.6 0.54 10.0 0.5 4.0 4 0 0 4 4 4 0 A2L zinc ribbon domain YhfH PF14149.6 gi|73670103|ref|YP_306118.1| - 1.4 8.9 12.2 3.5 7.7 0.6 4.3 4 0 0 4 4 4 0 YhfH-like protein OrfB_Zn_ribbon PF07282.11 gi|73670103|ref|YP_306118.1| - 1.7 8.6 10.8 5.7 6.9 3.1 3.6 3 1 1 4 4 4 0 Putative transposase DNA-binding domain zf-ZPR1 PF03367.13 gi|73670103|ref|YP_306118.1| - 1.9 8.4 7.6 0.68 9.8 0.5 2.4 2 1 0 2 2 2 0 ZPR1 zinc-finger domain zinc_ribbon_4 PF13717.6 gi|73670103|ref|YP_306118.1| - 3.1 7.8 8.5 34 4.5 0.0 4.0 4 0 0 4 4 4 0 zinc-ribbon domain HalOD2 PF18547.1 gi|73670103|ref|YP_306118.1| - 4 7.4 0.0 4 7.4 0.0 3.1 4 0 0 4 4 4 0 Halobacterial output domain 2 TFIIS_C PF01096.18 gi|73670103|ref|YP_306118.1| - 4.5 7.2 14.4 11 6.0 0.6 4.1 4 0 0 4 4 4 0 Transcription factor S-II (TFIIS) zf_C2H2_13 PF18508.1 gi|73670103|ref|YP_306118.1| - 7.3 6.3 8.1 29 4.4 0.1 3.9 4 0 0 4 4 4 0 Zinc finger domain PEPcase_2 PF14010.6 gi|73670104|ref|YP_306119.1| - 1.7e-119 399.6 0.0 1.9e-119 399.4 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Wza_C PF18412.1 gi|73670104|ref|YP_306119.1| - 0.15 11.8 0.1 0.41 10.4 0.1 1.7 1 0 0 1 1 1 0 Outer-membrane lipoprotein Wza C-terminal domain NosD PF05048.13 gi|73670105|ref|YP_306120.1| - 4.6e-34 117.8 22.7 4.6e-34 117.8 22.7 1.8 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670105|ref|YP_306120.1| - 9.9e-09 35.2 21.7 9.9e-09 35.2 21.7 2.1 2 0 0 2 2 2 1 Right handed beta helix region Sigma70_r4_2 PF08281.12 gi|73670106|ref|YP_306121.1| - 0.00021 20.9 0.1 0.00045 19.8 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|73670106|ref|YP_306121.1| - 0.0013 18.5 0.0 0.0022 17.7 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_40 PF14493.6 gi|73670106|ref|YP_306121.1| - 0.0016 18.9 0.0 0.0034 17.8 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain DUF5357 PF17310.2 gi|73670106|ref|YP_306121.1| - 0.0046 15.5 0.4 0.0061 15.2 0.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5357) HTH_7 PF02796.15 gi|73670106|ref|YP_306121.1| - 0.024 14.7 0.0 0.049 13.7 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_Tnp_IS630 PF01710.16 gi|73670106|ref|YP_306121.1| - 0.061 13.4 0.1 0.1 12.7 0.1 1.4 1 0 0 1 1 1 0 Transposase GerE PF00196.19 gi|73670106|ref|YP_306121.1| - 0.065 12.8 0.1 0.15 11.7 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DDE_Tnp_IS66 PF03050.14 gi|73670106|ref|YP_306121.1| - 0.1 12.0 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Transposase IS66 family HTH_29 PF13551.6 gi|73670106|ref|YP_306121.1| - 0.14 12.2 0.1 0.25 11.4 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix MatE PF01554.18 gi|73670107|ref|YP_306122.1| - 4.7e-53 179.1 44.1 3.4e-32 111.3 10.4 3.2 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.6 gi|73670107|ref|YP_306122.1| - 2.4e-10 40.6 14.9 2.4e-10 40.6 14.9 4.5 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain DUF5438 PF17506.2 gi|73670107|ref|YP_306122.1| - 0.037 14.3 0.1 0.037 14.3 0.1 3.2 4 0 0 4 4 4 0 Family of unknown function (DUF5438) MarR PF01047.22 gi|73670108|ref|YP_306123.1| - 9.7e-14 51.0 0.0 2.2e-12 46.7 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|73670108|ref|YP_306123.1| - 6.2e-10 39.4 0.2 9.2e-09 35.7 0.1 2.1 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|73670108|ref|YP_306123.1| - 1.1e-08 34.9 0.0 8.4e-08 32.0 0.0 2.0 2 0 0 2 2 2 1 MarR family PadR PF03551.14 gi|73670108|ref|YP_306123.1| - 3.7e-05 23.6 0.2 0.00073 19.5 0.1 2.2 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|73670108|ref|YP_306123.1| - 0.0006 19.9 0.0 0.00093 19.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|73670108|ref|YP_306123.1| - 0.0028 17.8 0.1 3.5 7.9 0.0 2.5 3 0 0 3 3 3 2 Iron dependent repressor, N-terminal DNA binding domain DUF4364 PF14277.6 gi|73670108|ref|YP_306123.1| - 0.0061 16.3 0.2 0.011 15.5 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) B-block_TFIIIC PF04182.12 gi|73670108|ref|YP_306123.1| - 0.0071 16.5 0.0 0.013 15.7 0.0 1.7 1 1 0 1 1 1 1 B-block binding subunit of TFIIIC HxlR PF01638.17 gi|73670108|ref|YP_306123.1| - 0.0084 15.9 0.0 0.024 14.5 0.0 1.8 1 1 1 2 2 2 1 HxlR-like helix-turn-helix DUF5343 PF17278.2 gi|73670108|ref|YP_306123.1| - 0.07 13.2 0.1 0.099 12.7 0.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5343) HTH_Crp_2 PF13545.6 gi|73670108|ref|YP_306123.1| - 0.11 12.5 0.0 1.3 9.0 0.0 2.1 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Y1_Tnp PF01797.16 gi|73670109|ref|YP_306124.1| - 8.3e-35 119.5 1.7 1.1e-34 119.1 1.7 1.2 1 0 0 1 1 1 1 Transposase IS200 like Peptidase_M44 PF03410.13 gi|73670109|ref|YP_306124.1| - 0.017 13.7 0.1 0.021 13.4 0.1 1.1 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox Aldo_ket_red PF00248.21 gi|73670110|ref|YP_306125.1| - 1.3e-42 146.0 0.0 7.3e-41 140.3 0.0 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|73670110|ref|YP_306125.1| - 1.8e-11 44.4 8.4 4.6e-11 43.1 8.4 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73670110|ref|YP_306125.1| - 2e-10 40.7 8.3 3.8e-10 39.8 8.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73670110|ref|YP_306125.1| - 0.00018 21.8 9.1 0.00044 20.6 9.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73670110|ref|YP_306125.1| - 0.00078 19.2 1.7 0.00078 19.2 1.7 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73670110|ref|YP_306125.1| - 0.00098 19.3 1.8 0.53 10.5 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73670110|ref|YP_306125.1| - 0.0012 18.9 7.6 0.092 12.9 0.6 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73670110|ref|YP_306125.1| - 0.0017 18.4 14.4 0.002 18.2 2.4 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|73670110|ref|YP_306125.1| - 0.0029 17.3 0.5 0.0029 17.3 0.5 2.2 1 1 1 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_22 PF17179.4 gi|73670110|ref|YP_306125.1| - 0.0051 17.6 3.6 0.52 11.2 0.5 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73670110|ref|YP_306125.1| - 0.1 13.1 0.8 0.1 13.1 0.8 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I NUMOD3 PF07460.11 gi|73670110|ref|YP_306125.1| - 0.11 12.7 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 NUMOD3 motif (2 copies) Fer4_7 PF12838.7 gi|73670110|ref|YP_306125.1| - 0.15 12.7 14.7 1.1 9.9 15.0 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Med27 PF11571.8 gi|73670110|ref|YP_306125.1| - 0.6 10.5 2.6 4.7 7.7 0.1 2.4 2 0 0 2 2 2 0 Mediator complex subunit 27 Fer4_4 PF12800.7 gi|73670110|ref|YP_306125.1| - 0.97 10.1 15.6 0.62 10.7 5.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73670110|ref|YP_306125.1| - 1.7 9.7 14.5 0.58 11.1 4.6 2.5 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|73670110|ref|YP_306125.1| - 1.7 9.8 16.1 0.51 11.4 6.2 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73670110|ref|YP_306125.1| - 5.4 7.3 15.8 0.78 10.0 2.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Disaggr_assoc PF08480.10 gi|73670111|ref|YP_306126.1| - 1.3e-73 246.9 10.4 1.3e-73 246.9 10.4 3.5 3 1 1 4 4 4 1 Disaggregatase related Beta_helix PF13229.6 gi|73670111|ref|YP_306126.1| - 1.7e-13 50.7 45.6 2.1e-11 43.9 14.6 4.5 1 1 2 3 3 3 2 Right handed beta helix region Pectate_lyase_3 PF12708.7 gi|73670111|ref|YP_306126.1| - 1.4e-06 28.3 6.5 1.4e-06 28.3 6.5 2.2 1 1 1 2 2 2 1 Pectate lyase superfamily protein DUF5123 PF17161.4 gi|73670111|ref|YP_306126.1| - 0.015 16.4 2.9 0.015 16.4 2.9 4.3 2 2 2 4 4 4 0 Domain of unknown function (DUF5123) DUF790 PF05626.11 gi|73670113|ref|YP_306128.1| - 3.3e-97 325.7 4.3 3.4e-62 210.4 0.6 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF790) Thump_like PF18096.1 gi|73670113|ref|YP_306128.1| - 0.095 12.6 0.0 0.58 10.1 0.0 2.4 1 1 1 2 2 2 0 THUMP domain-like Rad10 PF03834.14 gi|73670113|ref|YP_306128.1| - 0.11 12.5 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) Rrf2 PF02082.20 gi|73670113|ref|YP_306128.1| - 0.14 12.5 0.4 13 6.2 0.0 3.3 4 0 0 4 4 4 0 Transcriptional regulator ResIII PF04851.15 gi|73670114|ref|YP_306129.1| - 7.1e-25 88.0 0.0 1.8e-23 83.4 0.0 2.5 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit XPB_DRD PF18458.1 gi|73670114|ref|YP_306129.1| - 5.2e-20 71.1 0.1 3.8e-19 68.3 0.0 2.5 3 0 0 3 3 3 1 Xeroderma pigmentosum group B helicase damage recognition domain ERCC3_RAD25_C PF16203.5 gi|73670114|ref|YP_306129.1| - 1.5e-19 70.2 0.6 2.2e-19 69.7 0.6 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Helicase_C PF00271.31 gi|73670114|ref|YP_306129.1| - 7.6e-17 61.7 0.1 2.9e-16 59.8 0.2 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|73670114|ref|YP_306129.1| - 9e-08 32.1 0.0 1.7e-06 27.9 0.0 2.6 2 1 0 2 2 2 1 DEAD/DEAH box helicase CMD PF02627.20 gi|73670115|ref|YP_306130.1| - 2.7e-15 56.2 0.1 3.5e-15 55.8 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family DUF4177 PF13783.6 gi|73670116|ref|YP_306131.1| - 0.028 14.7 0.3 0.053 13.8 0.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4177) GATase1_like PF07090.11 gi|73670117|ref|YP_306132.1| - 8.7e-12 45.0 0.0 4.7e-05 23.0 0.0 2.4 2 0 0 2 2 2 2 Putative glutamine amidotransferase VWA_2 PF13519.6 gi|73670117|ref|YP_306132.1| - 2.3e-07 31.4 0.2 1.2e-06 29.1 0.0 2.2 2 1 0 2 2 2 1 von Willebrand factor type A domain VWA PF00092.28 gi|73670117|ref|YP_306132.1| - 8.2e-06 26.2 0.2 0.0076 16.5 0.0 2.4 2 0 0 2 2 2 2 von Willebrand factor type A domain Phytoreo_S7 PF07236.11 gi|73670117|ref|YP_306132.1| - 0.016 13.6 0.0 0.027 12.8 0.0 1.3 1 0 0 1 1 1 0 Phytoreovirus S7 protein ThuA PF06283.11 gi|73670117|ref|YP_306132.1| - 0.12 12.6 0.0 0.26 11.5 0.0 1.7 1 1 0 1 1 1 0 Trehalose utilisation BatA PF07584.11 gi|73670118|ref|YP_306133.1| - 4.4e-12 46.2 2.6 4.4e-12 46.2 2.6 1.9 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal VWA_2 PF13519.6 gi|73670118|ref|YP_306133.1| - 0.00071 20.2 0.3 0.0019 18.8 0.3 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|73670118|ref|YP_306133.1| - 0.054 12.9 0.0 0.088 12.2 0.0 1.3 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein DUF58 PF01882.18 gi|73670119|ref|YP_306134.1| - 3.2e-18 65.8 0.0 5.6e-18 65.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|73670119|ref|YP_306134.1| - 1e-05 26.1 0.1 2.3e-05 25.0 0.1 1.6 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|73670119|ref|YP_306134.1| - 0.0003 20.3 0.0 0.0012 18.3 0.0 1.9 1 1 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.28 gi|73670119|ref|YP_306134.1| - 0.026 14.8 0.2 0.052 13.8 0.2 1.6 1 1 0 1 1 1 0 von Willebrand factor type A domain Tospo_nucleocap PF01533.16 gi|73670119|ref|YP_306134.1| - 0.051 13.0 0.0 0.089 12.2 0.0 1.4 1 0 0 1 1 1 0 Tospovirus nucleocapsid protein AAA_3 PF07726.11 gi|73670120|ref|YP_306135.1| - 6.6e-63 210.4 0.2 1.1e-62 209.7 0.2 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|73670120|ref|YP_306135.1| - 1.4e-18 66.5 0.0 2.2e-18 65.8 0.0 1.4 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|73670120|ref|YP_306135.1| - 2.8e-11 43.6 0.0 6.3e-11 42.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|73670120|ref|YP_306135.1| - 1.5e-06 27.5 0.3 1e-05 24.7 0.3 2.1 1 1 0 1 1 1 1 MCM P-loop domain AAA PF00004.29 gi|73670120|ref|YP_306135.1| - 2.7e-06 27.8 0.1 6.7e-06 26.6 0.1 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|73670120|ref|YP_306135.1| - 0.00029 20.3 0.3 0.0084 15.5 0.1 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|73670120|ref|YP_306135.1| - 0.00055 19.7 0.1 0.0059 16.3 0.1 2.2 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|73670120|ref|YP_306135.1| - 0.0012 18.6 0.4 0.029 14.1 0.1 2.5 2 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 gi|73670120|ref|YP_306135.1| - 0.015 15.6 0.0 0.63 10.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_2 PF07724.14 gi|73670120|ref|YP_306135.1| - 0.031 14.4 0.0 0.071 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) GHL10 PF02638.15 gi|73670120|ref|YP_306135.1| - 0.083 12.0 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase-like 10 MFS_1 PF07690.16 gi|73670121|ref|YP_306136.1| - 0.15 11.0 4.2 0.12 11.3 2.2 1.7 2 0 0 2 2 2 0 Major Facilitator Superfamily YtzH PF14165.6 gi|73670122|ref|YP_306137.1| - 0.28 11.6 1.3 4.7 7.7 0.0 2.8 3 0 0 3 3 3 0 YtzH-like protein GxGYxYP_N PF16216.5 gi|73670122|ref|YP_306137.1| - 2.7 8.1 7.4 0.44 10.7 1.8 2.4 3 0 0 3 3 3 0 GxGYxY sequence motif in domain of unknown function N-terminal TPR_12 PF13424.6 gi|73670123|ref|YP_306138.1| - 5.2e-73 241.3 16.2 2.7e-15 56.4 1.2 6.4 3 1 2 6 6 6 6 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670123|ref|YP_306138.1| - 2.7e-62 205.1 19.7 7.7e-10 38.3 0.1 9.4 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73670123|ref|YP_306138.1| - 8e-41 136.2 36.6 6.5e-09 35.2 0.7 9.0 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670123|ref|YP_306138.1| - 2e-36 121.1 27.4 2.2e-06 27.3 0.4 9.4 9 0 0 9 9 9 7 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670123|ref|YP_306138.1| - 2.3e-28 96.1 19.9 5.2e-06 26.1 0.2 8.7 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670123|ref|YP_306138.1| - 2.6e-26 89.6 30.5 5.3e-06 26.2 0.3 8.9 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73670123|ref|YP_306138.1| - 4.2e-14 52.7 8.0 2.5e-11 43.6 0.3 3.0 1 1 2 3 3 3 2 MalT-like TPR region TPR_19 PF14559.6 gi|73670123|ref|YP_306138.1| - 5.9e-12 45.9 15.3 0.00031 21.2 0.1 5.2 3 2 1 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670123|ref|YP_306138.1| - 3.6e-10 39.8 2.7 9.1 7.4 0.0 7.1 8 0 0 8 8 6 0 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670123|ref|YP_306138.1| - 2e-07 31.1 17.9 0.85 9.9 0.6 6.2 3 2 2 6 6 5 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 gi|73670123|ref|YP_306138.1| - 3.6e-07 30.7 9.1 0.12 13.1 3.5 6.3 4 2 2 6 6 5 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73670123|ref|YP_306138.1| - 6.9e-07 29.5 23.0 0.16 12.7 0.2 8.3 8 0 0 8 8 7 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670123|ref|YP_306138.1| - 2.1e-06 27.3 23.2 0.15 11.7 0.2 7.4 8 0 0 8 8 7 3 TPR repeat TPR_17 PF13431.6 gi|73670123|ref|YP_306138.1| - 4.6e-06 26.6 21.3 0.11 12.9 0.1 7.4 8 0 0 8 8 6 2 Tetratricopeptide repeat RPN7 PF10602.9 gi|73670123|ref|YP_306138.1| - 2.1e-05 24.3 12.3 0.018 14.7 0.4 4.8 1 1 3 5 5 5 1 26S proteasome subunit RPN7 SHNi-TPR PF10516.9 gi|73670123|ref|YP_306138.1| - 0.00012 21.5 5.6 6.1 6.4 0.1 4.9 4 0 0 4 4 4 0 SHNi-TPR MIT PF04212.18 gi|73670123|ref|YP_306138.1| - 0.00018 21.5 21.9 0.44 10.7 0.1 6.6 4 2 3 7 7 6 3 MIT (microtubule interacting and transport) domain DUF627 PF04781.12 gi|73670123|ref|YP_306138.1| - 0.00077 19.4 5.3 2 8.4 0.0 4.6 3 1 0 3 3 3 1 Protein of unknown function (DUF627) NB-ARC PF00931.22 gi|73670123|ref|YP_306138.1| - 0.0019 17.4 0.0 0.018 14.2 0.0 2.3 2 0 0 2 2 2 1 NB-ARC domain 14-3-3 PF00244.20 gi|73670123|ref|YP_306138.1| - 0.0035 16.9 10.5 0.0082 15.7 0.2 4.2 1 1 3 4 4 4 1 14-3-3 protein Bac_DnaA PF00308.18 gi|73670123|ref|YP_306138.1| - 0.0078 16.1 0.0 0.02 14.7 0.0 1.6 1 0 0 1 1 1 1 Bacterial dnaA protein TPR_9 PF13371.6 gi|73670123|ref|YP_306138.1| - 0.0094 16.1 0.4 6.1 7.1 0.0 4.5 4 2 2 6 6 5 0 Tetratricopeptide repeat ANAPC5 PF12862.7 gi|73670123|ref|YP_306138.1| - 0.012 15.7 10.3 7.2 6.8 0.4 6.0 2 1 4 7 7 7 0 Anaphase-promoting complex subunit 5 DUF2225 PF09986.9 gi|73670123|ref|YP_306138.1| - 0.025 14.3 12.6 0.024 14.4 1.0 3.4 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2225) DnaGprimase_HBD PF16730.5 gi|73670123|ref|YP_306138.1| - 0.058 13.5 1.2 0.25 11.4 1.2 2.2 1 0 0 1 1 1 0 DnaG-primase C-terminal, helicase-binding domain TPR_3 PF07720.12 gi|73670123|ref|YP_306138.1| - 0.11 12.6 22.2 0.57 10.2 0.2 5.6 6 0 0 6 6 5 0 Tetratricopeptide repeat AAA_16 PF13191.6 gi|73670123|ref|YP_306138.1| - 0.12 12.8 0.0 0.26 11.7 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain SNAP PF14938.6 gi|73670123|ref|YP_306138.1| - 0.23 10.9 14.7 0.02 14.3 0.9 3.4 1 1 2 3 3 3 0 Soluble NSF attachment protein, SNAP Foie-gras_1 PF11817.8 gi|73670123|ref|YP_306138.1| - 0.4 10.2 3.1 6.4 6.3 0.1 3.4 3 1 1 4 4 3 0 Foie gras liver health family 1 Fis1_TPR_C PF14853.6 gi|73670123|ref|YP_306138.1| - 0.53 10.4 20.1 3.6 7.7 0.3 6.9 8 0 0 8 8 7 0 Fis1 C-terminal tetratricopeptide repeat CH PF00307.31 gi|73670123|ref|YP_306138.1| - 2.2 8.5 11.1 7.6 6.8 0.1 5.4 5 1 2 8 8 6 0 Calponin homology (CH) domain ABC_tran PF00005.27 gi|73670124|ref|YP_306139.1| - 4.6e-32 111.4 0.0 6.4e-32 110.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|73670124|ref|YP_306139.1| - 1.5e-07 31.1 0.2 4.4e-06 26.3 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73670124|ref|YP_306139.1| - 2.6e-06 27.5 0.3 0.054 13.3 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|73670124|ref|YP_306139.1| - 7.2e-06 26.5 0.2 1.4e-05 25.6 0.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|73670124|ref|YP_306139.1| - 1.5e-05 25.5 0.5 0.009 16.6 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|73670124|ref|YP_306139.1| - 5.4e-05 22.8 0.0 0.0037 16.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|73670124|ref|YP_306139.1| - 5.6e-05 23.4 0.2 0.00023 21.4 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73670124|ref|YP_306139.1| - 0.00026 20.7 0.0 0.00057 19.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SRP54 PF00448.22 gi|73670124|ref|YP_306139.1| - 0.0003 20.5 0.0 0.011 15.4 0.0 2.2 2 1 0 2 2 2 1 SRP54-type protein, GTPase domain RsgA_GTPase PF03193.16 gi|73670124|ref|YP_306139.1| - 0.0006 19.7 0.0 0.0011 18.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_28 PF13521.6 gi|73670124|ref|YP_306139.1| - 0.002 18.4 0.3 0.006 16.8 0.1 2.2 2 1 0 2 2 1 1 AAA domain IstB_IS21 PF01695.17 gi|73670124|ref|YP_306139.1| - 0.0021 17.8 0.0 0.062 13.0 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_24 PF13479.6 gi|73670124|ref|YP_306139.1| - 0.0046 16.7 0.2 0.0092 15.7 0.0 1.6 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 gi|73670124|ref|YP_306139.1| - 0.0052 15.9 0.0 0.0077 15.3 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_23 PF13476.6 gi|73670124|ref|YP_306139.1| - 0.011 16.2 0.4 0.015 15.8 0.4 1.6 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|73670124|ref|YP_306139.1| - 0.012 15.8 0.1 0.027 14.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|73670124|ref|YP_306139.1| - 0.017 15.1 0.0 0.032 14.2 0.0 1.5 2 0 0 2 2 1 0 ATPase domain predominantly from Archaea cobW PF02492.19 gi|73670124|ref|YP_306139.1| - 0.017 14.7 0.1 0.027 14.1 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 gi|73670124|ref|YP_306139.1| - 0.025 13.9 0.2 0.47 9.8 0.1 2.3 2 1 0 2 2 2 0 KaiC NACHT PF05729.12 gi|73670124|ref|YP_306139.1| - 0.026 14.4 0.6 0.082 12.8 0.1 2.0 2 1 1 3 3 2 0 NACHT domain G-alpha PF00503.20 gi|73670124|ref|YP_306139.1| - 0.031 13.4 0.1 0.033 13.3 0.1 1.4 1 1 0 1 1 1 0 G-protein alpha subunit AAA_30 PF13604.6 gi|73670124|ref|YP_306139.1| - 0.037 13.8 0.0 0.11 12.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|73670124|ref|YP_306139.1| - 0.04 14.2 0.4 0.56 10.5 0.4 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA PF00004.29 gi|73670124|ref|YP_306139.1| - 0.042 14.3 0.2 6.5 7.2 0.1 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|73670124|ref|YP_306139.1| - 0.042 13.9 0.0 0.075 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 gi|73670124|ref|YP_306139.1| - 0.046 13.1 0.0 0.079 12.4 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 gi|73670124|ref|YP_306139.1| - 0.053 13.6 0.2 0.17 12.0 0.1 1.7 2 1 0 2 2 2 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 gi|73670124|ref|YP_306139.1| - 0.054 13.4 0.1 0.36 10.7 0.0 2.0 2 0 0 2 2 2 0 NTPase MobB PF03205.14 gi|73670124|ref|YP_306139.1| - 0.06 13.2 0.1 0.22 11.4 0.0 1.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_15 PF13175.6 gi|73670124|ref|YP_306139.1| - 0.064 13.0 0.0 1.5 8.5 0.0 2.0 1 1 0 2 2 2 0 AAA ATPase domain NB-ARC PF00931.22 gi|73670124|ref|YP_306139.1| - 0.074 12.2 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain RNA12 PF10443.9 gi|73670124|ref|YP_306139.1| - 0.08 11.7 0.0 0.12 11.1 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein Rad17 PF03215.15 gi|73670124|ref|YP_306139.1| - 0.098 12.6 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain RNA_helicase PF00910.22 gi|73670124|ref|YP_306139.1| - 0.12 12.8 0.1 0.46 10.9 0.1 2.1 2 1 0 2 2 2 0 RNA helicase FtsX PF02687.21 gi|73670125|ref|YP_306140.1| - 0.00013 22.4 0.2 0.00013 22.4 0.2 3.2 3 0 0 3 3 3 2 FtsX-like permease family CARDB PF07705.11 gi|73670126|ref|YP_306141.1| - 9.7e-15 54.7 1.0 0.00047 20.4 0.1 4.3 4 0 0 4 4 4 3 CARDB TRAP_beta PF05753.14 gi|73670126|ref|YP_306141.1| - 5.7e-05 22.6 0.1 1.5 8.1 0.0 3.5 3 0 0 3 3 3 2 Translocon-associated protein beta (TRAPB) NPCBM_assoc PF10633.9 gi|73670126|ref|YP_306141.1| - 0.00061 20.0 0.0 5.7 7.3 0.0 4.4 5 0 0 5 5 5 1 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|73670126|ref|YP_306141.1| - 0.0022 18.2 0.0 4.4 7.7 0.0 3.9 3 2 0 3 3 3 1 Domain of unknown function DUF11 DUF2393 PF09624.10 gi|73670126|ref|YP_306141.1| - 0.016 15.2 0.0 5.7 6.9 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2393) DUF5562 PF17717.1 gi|73670126|ref|YP_306141.1| - 0.027 14.4 0.0 0.06 13.3 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5562) N_BRCA1_IG PF16158.5 gi|73670126|ref|YP_306141.1| - 0.11 13.3 0.0 1 10.1 0.0 2.5 2 1 0 2 2 2 0 Ig-like domain from next to BRCA1 gene DUF4625 PF15418.6 gi|73670126|ref|YP_306141.1| - 0.16 12.2 0.0 0.55 10.5 0.0 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4625) Na_Ala_symp PF01235.17 gi|73670127|ref|YP_306142.1| - 4e-142 474.2 28.1 5.1e-142 473.8 28.1 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family VKG_Carbox PF05090.14 gi|73670127|ref|YP_306142.1| - 0.73 8.6 4.5 0.82 8.4 1.5 2.3 2 1 0 2 2 2 0 Vitamin K-dependent gamma-carboxylase DUF3566 PF12089.8 gi|73670128|ref|YP_306143.1| - 0.13 12.6 10.3 0.16 12.3 3.6 2.1 1 1 1 2 2 2 0 Transmembrane domain of unknown function (DUF3566) Yip1 PF04893.17 gi|73670128|ref|YP_306143.1| - 0.18 11.5 10.2 0.22 11.2 10.2 1.1 1 0 0 1 1 1 0 Yip1 domain TIC20 PF16166.5 gi|73670128|ref|YP_306143.1| - 0.25 11.1 3.9 0.28 10.9 3.9 1.1 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like EI24 PF07264.11 gi|73670128|ref|YP_306143.1| - 0.27 11.5 5.9 0.33 11.2 5.9 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) UTP15_C PF09384.10 gi|73670132|ref|YP_306147.1| - 0.077 12.7 0.1 0.083 12.6 0.1 1.0 1 0 0 1 1 1 0 UTP15 C terminal SWI2_SNF2 PF18766.1 gi|73670133|ref|YP_306148.1| - 4.8e-75 252.1 0.1 1.3e-74 250.7 0.1 1.8 1 0 0 1 1 1 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|73670133|ref|YP_306148.1| - 1.5e-43 149.0 0.2 1.5e-43 149.0 0.2 3.2 4 0 0 4 4 4 1 Type I restriction enzyme R protein N terminus (HSDR_N) DUF3387 PF11867.8 gi|73670133|ref|YP_306148.1| - 5.1e-36 124.7 15.6 5.1e-36 124.7 15.6 2.1 3 0 0 3 3 3 1 Domain of unknown function (DUF3387) ResIII PF04851.15 gi|73670133|ref|YP_306148.1| - 1.3e-20 74.1 3.3 5.2e-20 72.1 0.1 2.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|73670133|ref|YP_306148.1| - 0.00025 20.9 1.1 0.033 13.9 0.0 3.4 3 0 0 3 3 3 1 DEAD/DEAH box helicase DUF3347 PF11827.8 gi|73670133|ref|YP_306148.1| - 8.3 6.5 9.9 24 5.0 0.6 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3347) PIP5K PF01504.18 gi|73670135|ref|YP_306150.1| - 0.0008 18.7 0.2 0.00096 18.4 0.2 1.2 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase SFTA2 PF15210.6 gi|73670135|ref|YP_306150.1| - 0.083 12.8 0.1 0.21 11.5 0.0 1.7 2 0 0 2 2 2 0 Surfactant-associated protein 2 TUSC2 PF15000.6 gi|73670135|ref|YP_306150.1| - 0.16 12.3 1.9 0.21 11.9 0.6 1.8 1 1 0 2 2 2 0 Tumour suppressor candidate 2 Methylase_S PF01420.19 gi|73670136|ref|YP_306151.1| - 7e-25 88.2 2.5 7e-13 49.1 0.0 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.16 gi|73670137|ref|YP_306152.1| - 7.1e-95 317.9 0.0 9.1e-95 317.5 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|73670137|ref|YP_306152.1| - 2.1e-20 73.8 0.8 2.1e-20 73.8 0.8 1.8 2 0 0 2 2 2 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|73670137|ref|YP_306152.1| - 2.4e-07 30.6 0.0 4.6e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|73670137|ref|YP_306152.1| - 3.8e-06 26.5 0.0 7.6e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|73670137|ref|YP_306152.1| - 0.0046 16.8 0.0 0.0089 15.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|73670137|ref|YP_306152.1| - 0.02 14.5 0.2 0.49 10.0 0.1 2.3 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase NUDIX PF00293.28 gi|73670138|ref|YP_306153.1| - 8.8e-11 42.0 0.0 1e-10 41.7 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain ANAPC4_WD40 PF12894.7 gi|73670138|ref|YP_306153.1| - 0.046 14.0 0.0 0.062 13.6 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain DUF1622 PF07784.11 gi|73670139|ref|YP_306154.1| - 0.079 12.9 3.7 0.93 9.4 1.2 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1622) DUF523 PF04463.12 gi|73670140|ref|YP_306155.1| - 5.9e-07 29.6 0.0 8.3e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF523) NosD PF05048.13 gi|73670141|ref|YP_306156.1| - 3.3e-41 141.1 36.1 7.3e-38 130.2 23.2 3.8 3 1 1 4 4 4 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670141|ref|YP_306156.1| - 4.7e-28 98.0 45.1 1.5e-19 70.4 23.7 3.1 2 1 1 3 3 3 2 Right handed beta helix region PGF-CTERM PF18204.1 gi|73670141|ref|YP_306156.1| - 2.9e-06 27.1 0.2 5.8e-06 26.1 0.2 1.5 1 0 0 1 1 1 1 PGF-CTERM motif SPX PF03105.19 gi|73670141|ref|YP_306156.1| - 0.24 11.3 13.7 0.43 10.4 13.7 1.4 1 0 0 1 1 1 0 SPX domain SDA1 PF05285.12 gi|73670141|ref|YP_306156.1| - 0.53 9.7 5.6 0.79 9.1 5.6 1.2 1 0 0 1 1 1 0 SDA1 Macoilin PF09726.9 gi|73670141|ref|YP_306156.1| - 1.3 7.5 11.2 1.7 7.1 11.2 1.2 1 0 0 1 1 1 0 Macoilin family Svs_4_5_6 PF17381.2 gi|73670141|ref|YP_306156.1| - 1.9 9.5 15.9 6 7.9 15.9 1.9 1 0 0 1 1 1 0 Seminal vesicle secretory proteins 4/5/6 Nop14 PF04147.12 gi|73670141|ref|YP_306156.1| - 2 6.6 7.0 2.6 6.1 7.0 1.1 1 0 0 1 1 1 0 Nop14-like family Menin PF05053.13 gi|73670141|ref|YP_306156.1| - 4.8 5.4 8.3 7.7 4.7 8.3 1.2 1 0 0 1 1 1 0 Menin Apt1 PF10351.9 gi|73670141|ref|YP_306156.1| - 7.5 5.3 11.5 11 4.8 11.5 1.2 1 0 0 1 1 1 0 Golgi-body localisation protein domain NTPase_1 PF03266.15 gi|73670142|ref|YP_306157.1| - 0.092 12.7 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 NTPase TMEM192 PF14802.6 gi|73670142|ref|YP_306157.1| - 0.87 8.6 5.0 0.37 9.8 0.8 2.2 2 0 0 2 2 2 0 TMEM192 family Bac_export_2 PF01312.19 gi|73670142|ref|YP_306157.1| - 5.1 6.2 15.9 0.52 9.5 1.2 2.6 2 1 1 3 3 3 0 FlhB HrpN YscU SpaS Family ATP_bind_3 PF01171.20 gi|73670143|ref|YP_306158.1| - 7.8e-13 48.6 0.0 1.2e-12 48.0 0.0 1.3 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|73670143|ref|YP_306158.1| - 0.0005 20.2 0.0 0.00087 19.4 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.17 gi|73670143|ref|YP_306158.1| - 0.00055 19.1 0.1 0.00075 18.7 0.1 1.1 1 0 0 1 1 1 1 NAD synthase zn-ribbon_14 PF16503.5 gi|73670143|ref|YP_306158.1| - 0.00074 19.0 4.7 0.00074 19.0 4.7 3.1 3 0 0 3 3 3 1 Zinc-ribbon tRNA_Me_trans PF03054.16 gi|73670143|ref|YP_306158.1| - 0.0008 18.3 0.0 0.0014 17.5 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase QueC PF06508.13 gi|73670143|ref|YP_306158.1| - 0.0015 18.1 0.0 0.0082 15.7 0.0 2.2 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 gi|73670143|ref|YP_306158.1| - 0.016 14.7 0.1 0.025 14.1 0.1 1.3 1 0 0 1 1 1 0 Diphthamide synthase Ribosomal_S27e PF01667.17 gi|73670143|ref|YP_306158.1| - 0.02 14.6 0.8 0.02 14.6 0.8 2.4 2 0 0 2 2 2 0 Ribosomal protein S27 Spt5-NGN PF03439.13 gi|73670143|ref|YP_306158.1| - 0.083 12.8 0.0 0.32 10.9 0.0 2.1 2 1 0 2 2 2 0 Early transcription elongation factor of RNA pol II, NGN section RecR PF02132.15 gi|73670143|ref|YP_306158.1| - 1.5 8.4 13.2 0.064 12.8 3.5 3.1 3 0 0 3 3 3 0 RecR protein MoeA_N PF03453.17 gi|73670144|ref|YP_306159.1| - 1.4e-37 128.9 0.3 2.3e-37 128.2 0.3 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|73670144|ref|YP_306159.1| - 2.2e-24 85.8 0.0 3.8e-24 85.0 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|73670144|ref|YP_306159.1| - 2.6e-13 50.0 4.9 9.4e-13 48.2 0.0 3.3 3 1 1 4 4 4 1 MoeA C-terminal region (domain IV) MobB PF03205.14 gi|73670145|ref|YP_306160.1| - 3.7e-18 65.7 0.0 5.9e-18 65.0 0.0 1.3 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B MoaE PF02391.17 gi|73670145|ref|YP_306160.1| - 2e-06 28.1 0.0 3.2e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 MoaE protein GTP_EFTU PF00009.27 gi|73670145|ref|YP_306160.1| - 0.006 16.1 0.4 0.012 15.1 0.4 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain AAA_14 PF13173.6 gi|73670145|ref|YP_306160.1| - 0.015 15.3 2.6 0.031 14.3 0.3 2.2 2 0 0 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 gi|73670145|ref|YP_306160.1| - 0.04 13.6 0.8 1.4 8.6 0.1 2.7 3 0 0 3 3 3 0 Thymidylate kinase MMR_HSR1 PF01926.23 gi|73670145|ref|YP_306160.1| - 0.04 14.0 0.9 0.058 13.5 0.9 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF463 PF04317.12 gi|73670145|ref|YP_306160.1| - 0.043 12.8 0.1 0.068 12.1 0.1 1.3 1 0 0 1 1 1 0 YcjX-like family, DUF463 UPF0128 PF03673.13 gi|73670145|ref|YP_306160.1| - 0.049 13.1 0.0 0.07 12.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0128) ABC_tran PF00005.27 gi|73670145|ref|YP_306160.1| - 0.061 13.8 0.3 0.12 12.9 0.3 1.5 1 0 0 1 1 1 0 ABC transporter AAA_33 PF13671.6 gi|73670145|ref|YP_306160.1| - 0.071 13.3 0.2 0.14 12.3 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|73670145|ref|YP_306160.1| - 0.095 13.0 0.3 0.24 11.7 0.2 1.8 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 gi|73670145|ref|YP_306160.1| - 0.16 12.2 0.3 0.41 10.9 0.3 1.7 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase MoaE PF02391.17 gi|73670146|ref|YP_306161.1| - 4.1e-06 27.0 0.1 4.6e-06 26.9 0.1 1.1 1 0 0 1 1 1 1 MoaE protein TauE PF01925.19 gi|73670148|ref|YP_306163.1| - 2.4e-12 47.0 3.2 2.7e-12 46.8 3.2 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE FUSC_2 PF13515.6 gi|73670148|ref|YP_306163.1| - 0.086 13.0 5.7 0.045 13.9 3.8 1.5 1 1 0 1 1 1 0 Fusaric acid resistance protein-like PAS_9 PF13426.7 gi|73670149|ref|YP_306164.1| - 2e-58 195.1 0.8 1.6e-18 66.8 0.0 6.4 7 0 0 7 7 7 4 PAS domain PAS PF00989.25 gi|73670149|ref|YP_306164.1| - 1.2e-49 167.1 0.0 7.4e-15 54.9 0.0 5.4 5 0 0 5 5 5 5 PAS fold PAS_8 PF13188.7 gi|73670149|ref|YP_306164.1| - 1.4e-39 133.5 0.0 2.6e-12 46.5 0.0 4.7 4 0 0 4 4 4 4 PAS domain PAS_4 PF08448.10 gi|73670149|ref|YP_306164.1| - 2.4e-37 127.6 0.0 5.3e-12 46.0 0.0 5.8 5 1 0 5 5 5 5 PAS fold HisKA_2 PF07568.12 gi|73670149|ref|YP_306164.1| - 1.6e-30 105.0 1.0 1.6e-30 105.0 1.0 3.4 3 0 0 3 3 3 1 Histidine kinase PAS_3 PF08447.12 gi|73670149|ref|YP_306164.1| - 3.7e-28 97.7 0.0 3.7e-09 36.7 0.0 5.1 5 1 0 5 5 5 4 PAS fold HATPase_c PF02518.26 gi|73670149|ref|YP_306164.1| - 8.7e-10 39.1 0.2 6.5e-09 36.3 0.2 2.5 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.7 gi|73670149|ref|YP_306164.1| - 8.8e-10 38.8 0.1 0.087 13.0 0.0 6.4 5 3 0 5 5 5 3 PAS fold PAS_12 PF18095.1 gi|73670149|ref|YP_306164.1| - 8.6e-06 25.5 0.0 0.18 11.4 0.0 3.5 3 0 0 3 3 3 2 UPF0242 C-terminal PAS-like domain MEKHLA PF08670.11 gi|73670149|ref|YP_306164.1| - 4.9e-05 23.3 0.0 0.31 10.9 0.0 3.6 3 0 0 3 3 3 2 MEKHLA domain HATPase_c_2 PF13581.6 gi|73670149|ref|YP_306164.1| - 0.00033 20.6 0.0 0.00081 19.4 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_10 PF13596.6 gi|73670149|ref|YP_306164.1| - 0.0005 20.6 0.0 0.016 15.8 0.0 3.3 2 0 0 2 2 2 1 PAS domain HWE_HK PF07536.14 gi|73670149|ref|YP_306164.1| - 0.0027 18.3 0.2 0.015 16.0 0.0 2.4 3 0 0 3 3 2 1 HWE histidine kinase SPOB_a PF14689.6 gi|73670149|ref|YP_306164.1| - 0.057 13.1 0.1 0.18 11.6 0.1 1.8 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain Plasmid_parti PF01672.16 gi|73670149|ref|YP_306164.1| - 0.13 12.9 1.1 1.9 9.2 0.0 3.0 3 0 0 3 3 2 0 Putative plasmid partition protein DUF4096 PF13340.6 gi|73670150|ref|YP_306165.1| - 2.2e-22 79.0 0.0 2.8e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1_2 PF13586.6 gi|73670151|ref|YP_306166.1| - 2.4e-13 50.3 0.9 2.8e-13 50.0 0.9 1.0 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 gi|73670151|ref|YP_306166.1| - 0.074 12.7 1.0 0.084 12.5 1.0 1.3 1 0 0 1 1 1 0 Transposase DDE domain DUF948 PF06103.11 gi|73670152|ref|YP_306167.1| - 0.00019 21.7 1.7 0.0002 21.5 0.4 1.6 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) TssO PF17561.2 gi|73670152|ref|YP_306167.1| - 0.011 15.9 0.6 0.02 15.0 0.6 1.4 1 0 0 1 1 1 0 Type VI secretion system, TssO Phage_GP20 PF06810.11 gi|73670152|ref|YP_306167.1| - 0.015 15.1 2.6 0.15 11.8 0.9 2.1 2 0 0 2 2 2 0 Phage minor structural protein GP20 Orthopox_F14 PF06076.12 gi|73670152|ref|YP_306167.1| - 0.017 15.4 1.3 0.017 15.4 1.3 1.8 2 0 0 2 2 2 0 Orthopoxvirus F14 protein BLOC1_2 PF10046.9 gi|73670152|ref|YP_306167.1| - 0.017 15.4 0.9 0.045 14.0 0.9 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Laminin_II PF06009.12 gi|73670152|ref|YP_306167.1| - 0.037 14.0 1.8 0.078 13.0 1.8 1.5 1 0 0 1 1 1 0 Laminin Domain II FPP PF05911.11 gi|73670152|ref|YP_306167.1| - 0.081 11.1 3.8 0.094 10.9 3.8 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil Fib_alpha PF08702.10 gi|73670152|ref|YP_306167.1| - 0.1 12.8 5.1 0.083 13.1 1.9 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Tetraspanin PF00335.20 gi|73670152|ref|YP_306167.1| - 0.11 12.2 1.0 0.15 11.7 1.0 1.5 1 1 0 1 1 1 0 Tetraspanin family DUF3290 PF11694.8 gi|73670152|ref|YP_306167.1| - 0.11 12.4 1.7 0.5 10.3 2.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3290) DUF5100 PF17029.5 gi|73670152|ref|YP_306167.1| - 0.15 11.9 2.5 0.31 10.9 1.8 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF5100) Tropomyosin_1 PF12718.7 gi|73670152|ref|YP_306167.1| - 0.16 12.1 1.7 0.3 11.2 1.7 1.4 1 0 0 1 1 1 0 Tropomyosin like FlxA PF14282.6 gi|73670152|ref|YP_306167.1| - 3.3 7.8 11.2 0.039 14.0 3.0 1.8 2 0 0 2 2 2 0 FlxA-like protein ThrE PF06738.12 gi|73670153|ref|YP_306168.1| - 2e-38 132.1 29.4 9.2e-37 126.7 7.5 2.0 2 0 0 2 2 2 2 Putative threonine/serine exporter ThrE_2 PF12821.7 gi|73670153|ref|YP_306168.1| - 3.1e-08 33.8 32.3 4.7e-05 23.5 10.3 2.3 2 0 0 2 2 2 2 Threonine/Serine exporter, ThrE NADH-u_ox-rdase PF10785.9 gi|73670153|ref|YP_306168.1| - 0.92 10.2 4.1 1.7 9.4 0.0 3.1 2 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit Gly-zipper_Omp PF13488.6 gi|73670153|ref|YP_306168.1| - 3.2 7.8 5.6 54 3.9 0.2 3.4 3 0 0 3 3 3 0 Glycine zipper Sacchrp_dh_NADP PF03435.18 gi|73670154|ref|YP_306169.1| - 1.1e-27 96.8 0.1 3.8e-27 95.1 0.0 1.9 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Sacchrp_dh_C PF16653.5 gi|73670154|ref|YP_306169.1| - 2e-22 80.6 0.0 3.2e-22 79.9 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain TrkA_N PF02254.18 gi|73670154|ref|YP_306169.1| - 0.13 12.6 0.1 5 7.4 0.0 2.2 2 0 0 2 2 2 0 TrkA-N domain LigB PF02900.18 gi|73670155|ref|YP_306170.1| - 1.6e-24 86.5 0.0 1.8e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase DAO PF01266.24 gi|73670156|ref|YP_306171.1| - 2.9e-36 125.8 0.0 3.3e-36 125.6 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|73670156|ref|YP_306171.1| - 0.0001 21.7 2.7 0.5 9.6 0.1 3.1 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|73670156|ref|YP_306171.1| - 0.00014 21.2 3.8 0.00079 18.7 3.8 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|73670156|ref|YP_306171.1| - 0.00016 21.8 1.1 0.00039 20.6 1.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|73670156|ref|YP_306171.1| - 0.00029 20.0 1.0 0.036 13.2 0.6 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A Thi4 PF01946.17 gi|73670156|ref|YP_306171.1| - 0.00049 19.4 0.3 0.0011 18.3 0.3 1.5 1 0 0 1 1 1 1 Thi4 family 3HCDH_N PF02737.18 gi|73670156|ref|YP_306171.1| - 0.0006 19.7 0.7 0.023 14.6 0.5 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_2 PF00890.24 gi|73670156|ref|YP_306171.1| - 0.00084 18.5 3.4 0.0014 17.8 3.4 1.6 1 1 0 1 1 1 1 FAD binding domain FAD_binding_3 PF01494.19 gi|73670156|ref|YP_306171.1| - 0.0013 18.1 1.6 0.0019 17.5 1.6 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|73670156|ref|YP_306171.1| - 0.008 14.9 4.9 0.13 11.0 3.2 2.6 2 1 1 3 3 3 1 HI0933-like protein FAD_oxidored PF12831.7 gi|73670156|ref|YP_306171.1| - 0.024 14.0 3.2 0.056 12.8 3.2 1.8 1 1 0 1 1 1 0 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|73670156|ref|YP_306171.1| - 0.026 13.4 2.5 0.047 12.5 2.5 1.4 1 0 0 1 1 1 0 Tryptophan halogenase Amino_oxidase PF01593.24 gi|73670156|ref|YP_306171.1| - 0.044 13.1 0.2 1.1 8.5 0.2 2.2 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase AlaDh_PNT_C PF01262.21 gi|73670156|ref|YP_306171.1| - 0.18 11.0 3.3 0.39 10.0 3.3 1.6 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|73670156|ref|YP_306171.1| - 0.57 10.8 4.6 0.37 11.4 2.3 2.1 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase MarR PF01047.22 gi|73670157|ref|YP_306172.1| - 1.2e-11 44.4 1.0 2.6e-11 43.3 1.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|73670157|ref|YP_306172.1| - 1.4e-07 31.9 0.1 3.3e-07 30.7 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|73670157|ref|YP_306172.1| - 5e-07 29.5 0.1 8.2e-07 28.8 0.1 1.4 1 0 0 1 1 1 1 MarR family B-block_TFIIIC PF04182.12 gi|73670157|ref|YP_306172.1| - 3.5e-05 23.9 0.4 7.6e-05 22.8 0.1 1.7 2 0 0 2 2 2 1 B-block binding subunit of TFIIIC HTH_24 PF13412.6 gi|73670157|ref|YP_306172.1| - 0.00014 21.3 0.5 0.00034 20.1 0.5 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|73670157|ref|YP_306172.1| - 0.00098 19.3 0.0 0.0033 17.6 0.0 1.9 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.21 gi|73670157|ref|YP_306172.1| - 0.0054 16.4 0.1 0.013 15.2 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_34 PF13601.6 gi|73670157|ref|YP_306172.1| - 0.0061 16.7 0.4 0.013 15.7 0.1 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain Rod_C PF10493.9 gi|73670157|ref|YP_306172.1| - 0.0074 14.7 0.4 0.011 14.2 0.4 1.2 1 0 0 1 1 1 1 Rough deal protein C-terminal region HTH_Crp_2 PF13545.6 gi|73670157|ref|YP_306172.1| - 0.0081 16.1 1.4 0.024 14.6 1.3 1.9 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain RNA_pol_Rpb4 PF03874.16 gi|73670157|ref|YP_306172.1| - 0.027 14.8 1.5 0.043 14.2 1.0 1.7 1 1 1 2 2 2 0 RNA polymerase Rpb4 UPF0058 PF01893.16 gi|73670157|ref|YP_306172.1| - 0.046 14.0 0.7 0.1 12.9 0.1 1.9 2 1 0 2 2 2 0 Uncharacterised protein family UPF0058 TFIIE_alpha PF02002.17 gi|73670157|ref|YP_306172.1| - 0.088 12.7 3.5 0.13 12.1 0.5 2.1 1 1 1 2 2 2 0 TFIIE alpha subunit ABC_membrane PF00664.23 gi|73670158|ref|YP_306173.1| - 5.6e-43 147.6 19.4 7.2e-43 147.2 19.4 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|73670158|ref|YP_306173.1| - 7e-32 110.8 0.1 2e-31 109.3 0.1 1.8 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|73670158|ref|YP_306173.1| - 6.3e-05 23.4 0.0 0.00012 22.5 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|73670158|ref|YP_306173.1| - 0.0015 18.0 5.1 0.089 12.2 0.4 2.4 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 gi|73670158|ref|YP_306173.1| - 0.04 12.7 0.0 0.063 12.1 0.0 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class DUF87 PF01935.17 gi|73670158|ref|YP_306173.1| - 0.063 13.4 0.3 0.063 13.4 0.3 2.2 2 1 0 2 2 2 0 Helicase HerA, central domain AAA_29 PF13555.6 gi|73670158|ref|YP_306173.1| - 0.13 12.1 0.1 0.34 10.7 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_membrane PF00664.23 gi|73670159|ref|YP_306174.1| - 5e-59 200.2 19.2 7.4e-59 199.6 19.2 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|73670159|ref|YP_306174.1| - 7.2e-34 117.2 0.3 1.5e-33 116.2 0.3 1.6 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|73670159|ref|YP_306174.1| - 6.7e-06 26.4 1.3 0.00025 21.3 0.4 3.0 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|73670159|ref|YP_306174.1| - 8.7e-06 25.3 2.2 0.00036 20.0 2.2 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|73670159|ref|YP_306174.1| - 0.00012 22.5 0.6 0.0032 17.9 0.6 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ABC_membrane_2 PF06472.15 gi|73670159|ref|YP_306174.1| - 0.00029 20.4 11.1 0.00092 18.7 9.3 2.5 2 1 1 3 3 3 1 ABC transporter transmembrane region 2 AAA_16 PF13191.6 gi|73670159|ref|YP_306174.1| - 0.0003 21.2 0.1 0.00064 20.1 0.1 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 gi|73670159|ref|YP_306174.1| - 0.00042 20.1 0.3 0.00086 19.1 0.2 1.6 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|73670159|ref|YP_306174.1| - 0.00065 19.5 0.0 0.0016 18.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain DEAD PF00270.29 gi|73670159|ref|YP_306174.1| - 0.0007 19.4 0.3 0.0015 18.3 0.3 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase RsgA_GTPase PF03193.16 gi|73670159|ref|YP_306174.1| - 0.00083 19.3 0.0 0.0018 18.2 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|73670159|ref|YP_306174.1| - 0.00098 19.2 0.2 0.0034 17.5 0.2 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 gi|73670159|ref|YP_306174.1| - 0.0011 19.6 3.3 0.0017 18.9 1.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_21 PF13304.6 gi|73670159|ref|YP_306174.1| - 0.0023 17.8 1.6 0.047 13.5 0.5 2.3 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|73670159|ref|YP_306174.1| - 0.0047 16.7 1.2 0.006 16.3 0.1 1.8 2 0 0 2 2 2 1 AAA ATPase domain EI24 PF07264.11 gi|73670159|ref|YP_306174.1| - 0.0051 17.1 6.6 0.0051 17.1 6.6 2.2 1 1 0 2 2 2 1 Etoposide-induced protein 2.4 (EI24) Rad17 PF03215.15 gi|73670159|ref|YP_306174.1| - 0.0062 16.5 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 Rad17 P-loop domain ATP-synt_ab PF00006.25 gi|73670159|ref|YP_306174.1| - 0.0085 15.8 0.3 0.017 14.8 0.2 1.6 1 1 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain SRP54 PF00448.22 gi|73670159|ref|YP_306174.1| - 0.01 15.5 1.7 0.66 9.6 0.2 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_14 PF13173.6 gi|73670159|ref|YP_306174.1| - 0.011 15.8 0.3 0.12 12.4 0.3 2.6 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|73670159|ref|YP_306174.1| - 0.02 14.6 0.3 0.049 13.4 0.3 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 gi|73670159|ref|YP_306174.1| - 0.029 13.6 0.1 0.075 12.3 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 gi|73670159|ref|YP_306174.1| - 0.029 14.7 0.3 0.074 13.4 0.3 1.7 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|73670159|ref|YP_306174.1| - 0.033 14.7 0.0 0.089 13.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|73670159|ref|YP_306174.1| - 0.04 13.0 0.1 0.077 12.0 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_7 PF12775.7 gi|73670159|ref|YP_306174.1| - 0.057 12.9 0.1 0.12 11.8 0.1 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 gi|73670159|ref|YP_306174.1| - 0.095 12.7 0.1 0.22 11.5 0.1 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 gi|73670159|ref|YP_306174.1| - 0.13 12.5 0.0 0.26 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|73670159|ref|YP_306174.1| - 0.16 12.1 0.5 1 9.5 0.5 2.2 1 1 0 1 1 1 0 AAA domain DUF898 PF05987.13 gi|73670159|ref|YP_306174.1| - 0.25 10.3 7.9 1.1 8.3 0.9 2.4 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF898) Phage_holin_4_1 PF05105.12 gi|73670159|ref|YP_306174.1| - 0.42 10.8 12.3 0.026 14.7 5.8 2.3 2 0 0 2 2 2 0 Bacteriophage holin family PocR PF10114.9 gi|73670160|ref|YP_306175.1| - 1e-43 148.9 0.0 2.8e-43 147.5 0.0 1.8 1 0 0 1 1 1 1 Sensory domain found in PocR HisKA_2 PF07568.12 gi|73670160|ref|YP_306175.1| - 6.6e-30 103.0 2.2 1.9e-29 101.6 0.5 2.7 2 0 0 2 2 2 1 Histidine kinase PAS PF00989.25 gi|73670160|ref|YP_306175.1| - 5.4e-10 39.3 0.0 8.2e-06 25.8 0.0 3.7 3 0 0 3 3 3 1 PAS fold HATPase_c PF02518.26 gi|73670160|ref|YP_306175.1| - 1.8e-07 31.6 0.1 6.2e-07 29.9 0.1 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|73670160|ref|YP_306175.1| - 9.5e-05 22.6 0.0 1.6 9.0 0.0 4.1 4 0 0 4 4 4 2 PAS domain PAS_4 PF08448.10 gi|73670160|ref|YP_306175.1| - 0.00011 22.5 0.0 0.22 11.8 0.0 3.8 3 1 0 3 3 3 1 PAS fold PAS_3 PF08447.12 gi|73670160|ref|YP_306175.1| - 0.00074 19.8 0.0 0.0054 17.0 0.0 2.6 3 0 0 3 3 3 1 PAS fold HATPase_c_2 PF13581.6 gi|73670160|ref|YP_306175.1| - 0.00074 19.5 0.0 0.0019 18.2 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_8 PF13188.7 gi|73670160|ref|YP_306175.1| - 0.0012 18.8 0.0 0.59 10.2 0.0 3.2 2 0 0 2 2 2 1 PAS domain HWE_HK PF07536.14 gi|73670160|ref|YP_306175.1| - 0.0034 18.0 0.0 0.013 16.2 0.0 2.1 1 0 0 1 1 1 1 HWE histidine kinase PKD PF00801.20 gi|73670161|ref|YP_306176.1| - 3.5e-63 209.4 12.7 2.9e-15 55.9 0.4 4.5 4 0 0 4 4 4 4 PKD domain Beta_helix PF13229.6 gi|73670161|ref|YP_306176.1| - 4.1e-13 49.5 55.0 1.2e-06 28.4 32.0 3.7 1 1 0 2 2 2 2 Right handed beta helix region MG2 PF01835.19 gi|73670161|ref|YP_306176.1| - 4.8e-10 39.8 12.9 0.13 12.8 0.1 4.7 1 1 3 4 4 4 4 MG2 domain ChitinaseA_N PF08329.10 gi|73670161|ref|YP_306176.1| - 2.3e-09 37.0 2.5 0.99 9.0 0.1 4.8 4 0 0 4 4 4 4 Chitinase A, N-terminal domain PKD_3 PF16820.5 gi|73670161|ref|YP_306176.1| - 5.3e-08 32.5 4.8 1.1 9.1 0.1 4.6 4 0 0 4 4 4 4 PKD-like domain DUF4625 PF15418.6 gi|73670161|ref|YP_306176.1| - 0.0024 18.1 1.0 30 4.8 0.0 4.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4625) MCR_beta_N PF02783.15 gi|73670161|ref|YP_306176.1| - 0.0054 16.4 4.8 22 4.6 0.0 4.6 5 0 0 5 5 5 0 Methyl-coenzyme M reductase beta subunit, N-terminal domain SoxZ PF08770.11 gi|73670161|ref|YP_306176.1| - 0.007 16.1 12.2 8.9 6.2 0.1 5.4 5 1 0 5 5 5 3 Sulphur oxidation protein SoxZ Invasin_D3 PF09134.10 gi|73670161|ref|YP_306176.1| - 0.022 15.1 18.9 1.7 9.0 0.4 5.0 4 0 0 4 4 4 0 Invasin, domain 3 Tudor_3 PF18115.1 gi|73670161|ref|YP_306176.1| - 0.074 12.9 0.3 1.9e+02 2.0 0.0 4.4 4 0 0 4 4 4 0 DNA repair protein Crb2 Tudor domain He_PIG PF05345.12 gi|73670161|ref|YP_306176.1| - 0.085 13.1 10.3 8.6 6.6 0.1 5.3 5 0 0 5 5 5 0 Putative Ig domain ribosomal_L24 PF17136.4 gi|73670161|ref|YP_306176.1| - 0.11 12.9 6.7 37 4.8 0.1 4.3 4 0 0 4 4 4 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 GH115_C PF17829.1 gi|73670161|ref|YP_306176.1| - 1.9 8.3 10.8 23 4.8 0.2 4.2 1 1 3 4 4 4 0 Gylcosyl hydrolase family 115 C-terminal domain OrfB_IS605 PF01385.19 gi|73670163|ref|YP_306178.1| - 4.9e-26 91.3 1.6 1e-25 90.3 1.6 1.5 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73670163|ref|YP_306178.1| - 2.8e-23 81.6 0.4 6e-23 80.6 0.4 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73670163|ref|YP_306178.1| - 9.8e-21 73.0 0.5 1.9e-20 72.0 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73670163|ref|YP_306178.1| - 0.0036 17.4 1.8 0.0054 16.8 0.5 1.9 2 0 0 2 2 2 1 Piccolo Zn-finger HypA PF01155.19 gi|73670163|ref|YP_306178.1| - 0.16 12.0 0.0 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|73670163|ref|YP_306178.1| - 0.16 12.0 0.5 0.3 11.1 0.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_10 PF10058.9 gi|73670163|ref|YP_306178.1| - 0.27 11.0 1.3 0.57 10.0 1.3 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn_Tnp_IS1595 PF12760.7 gi|73670163|ref|YP_306178.1| - 0.3 11.1 2.0 0.53 10.3 2.0 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-RanBP PF00641.18 gi|73670163|ref|YP_306178.1| - 1.7 8.1 6.8 9.6 5.6 0.2 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Y1_Tnp PF01797.16 gi|73670164|ref|YP_306179.1| - 4.2e-27 94.7 1.1 4.5e-27 94.6 1.1 1.0 1 0 0 1 1 1 1 Transposase IS200 like Pyr_redox_2 PF07992.14 gi|73670165|ref|YP_306180.1| - 1.2e-43 149.4 0.0 1.6e-43 149.0 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|73670165|ref|YP_306180.1| - 2.6e-22 79.2 0.1 2.6e-21 75.9 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|73670165|ref|YP_306180.1| - 1.4e-15 57.6 0.0 4.8e-15 55.9 0.0 2.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|73670165|ref|YP_306180.1| - 3.7e-10 39.6 0.0 9.3e-10 38.2 0.0 1.6 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|73670165|ref|YP_306180.1| - 6.6e-06 25.5 0.3 0.045 12.9 0.3 2.7 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 gi|73670165|ref|YP_306180.1| - 0.0083 15.2 0.0 0.015 14.4 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain DDE_Tnp_1 PF01609.21 gi|73670166|ref|YP_306181.1| - 1e-18 67.8 1.5 4.7e-18 65.6 1.5 1.9 1 1 0 1 1 1 1 Transposase DDE domain DUF4277 PF14104.6 gi|73670166|ref|YP_306181.1| - 2.5e-12 47.1 0.0 5.5e-12 46.0 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) Ntox15 PF15604.6 gi|73670166|ref|YP_306181.1| - 2.2 8.4 6.3 0.52 10.4 2.0 2.1 1 1 1 2 2 2 0 Novel toxin 15 DUF4277 PF14104.6 gi|73670167|ref|YP_306182.1| - 4.6e-40 136.4 0.0 7.4e-40 135.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) Pyrophosphatase PF00719.19 gi|73670168|ref|YP_306183.1| - 1.6e-06 28.0 0.0 2.1e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Inorganic pyrophosphatase Radical_SAM PF04055.21 gi|73670169|ref|YP_306184.1| - 1.6e-17 64.3 0.1 3.8e-17 63.2 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.6 gi|73670169|ref|YP_306184.1| - 3.6e-06 27.4 1.5 6.6e-06 26.5 0.3 2.1 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|73670169|ref|YP_306184.1| - 0.00038 20.8 0.0 0.00075 19.8 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73670169|ref|YP_306184.1| - 0.0084 16.2 0.0 0.017 15.3 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Oxidored_nitro PF00148.19 gi|73670171|ref|YP_306186.1| - 1.6e-40 139.1 0.0 1.9e-40 138.8 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Fer4_NifH PF00142.18 gi|73670172|ref|YP_306187.1| - 1.2e-74 251.2 0.0 1.9e-74 250.6 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Oxidored_nitro PF00148.19 gi|73670172|ref|YP_306187.1| - 7.7e-64 215.9 0.0 1e-63 215.5 0.0 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase CbiA PF01656.23 gi|73670172|ref|YP_306187.1| - 0.0014 18.7 0.0 0.0039 17.2 0.0 1.8 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|73670172|ref|YP_306187.1| - 0.0019 18.1 0.0 0.0035 17.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|73670173|ref|YP_306188.1| - 9.1e-24 84.8 18.1 2e-13 50.8 0.4 3.2 2 1 0 3 3 3 2 AAA ATPase domain AAA_21 PF13304.6 gi|73670173|ref|YP_306188.1| - 1.7e-18 67.5 1.6 3.6e-18 66.4 1.6 1.6 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|73670173|ref|YP_306188.1| - 1.3e-09 38.8 1.1 1.3e-09 38.8 1.1 2.6 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|73670173|ref|YP_306188.1| - 1e-08 34.8 0.0 2.5e-08 33.5 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|73670173|ref|YP_306188.1| - 5.1e-07 29.4 0.6 9.1e-06 25.3 0.1 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain DUF2813 PF11398.8 gi|73670173|ref|YP_306188.1| - 1.1e-05 24.8 3.1 3.9e-05 23.1 0.0 2.7 3 0 0 3 3 3 1 Protein of unknown function (DUF2813) ABC_tran PF00005.27 gi|73670173|ref|YP_306188.1| - 3.4e-05 24.4 0.0 0.06 13.9 0.0 2.7 2 0 0 2 2 2 2 ABC transporter AAA_27 PF13514.6 gi|73670173|ref|YP_306188.1| - 0.0011 18.7 0.0 0.0022 17.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|73670173|ref|YP_306188.1| - 0.0028 17.7 0.2 0.012 15.7 0.1 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase HTH_21 PF13276.6 gi|73670173|ref|YP_306188.1| - 0.061 13.5 0.0 0.18 12.0 0.0 1.8 1 0 0 1 1 1 0 HTH-like domain Dynamin_N PF00350.23 gi|73670173|ref|YP_306188.1| - 0.11 12.6 0.5 0.64 10.1 0.0 2.4 2 0 0 2 2 2 0 Dynamin family Prenyltrans PF00432.21 gi|73670175|ref|YP_306190.1| - 3.3e-17 61.9 0.7 0.00048 19.8 0.1 7.7 7 1 0 7 7 7 5 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_N PF13249.6 gi|73670175|ref|YP_306190.1| - 1.4e-06 27.6 0.0 0.64 9.1 0.0 4.4 3 1 2 5 5 5 2 Squalene-hopene cyclase N-terminal domain SQHop_cyclase_C PF13243.6 gi|73670175|ref|YP_306190.1| - 1.8e-06 27.3 0.1 0.0004 19.6 0.0 3.9 4 1 1 5 5 5 1 Squalene-hopene cyclase C-terminal domain DUF1837 PF08878.11 gi|73670175|ref|YP_306190.1| - 0.1 12.4 2.8 0.25 11.1 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1837) UvrB_inter PF17757.1 gi|73670177|ref|YP_306192.1| - 4.7e-31 106.8 0.5 1.4e-30 105.3 0.5 1.9 1 0 0 1 1 1 1 UvrB interaction domain UvrB PF12344.8 gi|73670177|ref|YP_306192.1| - 1e-21 76.5 1.6 1e-21 76.5 1.6 2.2 2 0 0 2 2 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|73670177|ref|YP_306192.1| - 1.3e-17 64.1 0.3 4.3e-17 62.4 0.3 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|73670177|ref|YP_306192.1| - 3.1e-13 50.1 0.7 9.7e-12 45.2 0.0 3.0 2 1 0 3 3 3 1 Type III restriction enzyme, res subunit UVR PF02151.19 gi|73670177|ref|YP_306192.1| - 1.4e-09 37.3 3.2 1.4e-09 37.3 3.2 2.4 2 0 0 2 2 2 1 UvrB/uvrC motif DEAD PF00270.29 gi|73670177|ref|YP_306192.1| - 3.9e-05 23.5 0.0 0.0034 17.2 0.0 3.3 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|73670177|ref|YP_306192.1| - 0.00065 19.5 0.0 0.015 15.1 0.0 2.5 2 1 0 2 2 2 1 AAA domain SWI2_SNF2 PF18766.1 gi|73670177|ref|YP_306192.1| - 0.013 15.2 0.4 0.18 11.4 0.0 2.8 3 1 1 4 4 4 0 SWI2/SNF2 ATPase Kinesin PF00225.23 gi|73670177|ref|YP_306192.1| - 0.015 14.2 0.1 0.023 13.6 0.1 1.3 1 0 0 1 1 1 0 Kinesin motor domain AAA_19 PF13245.6 gi|73670177|ref|YP_306192.1| - 0.018 15.3 0.4 9.5 6.5 0.1 2.6 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 gi|73670177|ref|YP_306192.1| - 0.021 14.9 0.0 0.25 11.4 0.0 2.7 3 0 0 3 3 3 0 Helicase HerA, central domain AAA_22 PF13401.6 gi|73670177|ref|YP_306192.1| - 0.029 14.6 0.1 0.49 10.7 0.0 3.0 3 1 0 3 3 3 0 AAA domain AAA PF00004.29 gi|73670177|ref|YP_306192.1| - 0.042 14.3 0.8 2.4 8.6 0.0 3.3 4 0 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) Flavi_DEAD PF07652.14 gi|73670177|ref|YP_306192.1| - 0.087 12.8 0.2 0.51 10.3 0.2 2.3 3 0 0 3 3 3 0 Flavivirus DEAD domain AAA_16 PF13191.6 gi|73670177|ref|YP_306192.1| - 0.1 13.0 0.0 1.2 9.5 0.0 2.4 2 0 0 2 2 2 0 AAA ATPase domain UvrC_HhH_N PF08459.11 gi|73670178|ref|YP_306193.1| - 9.4e-52 175.0 1.2 2e-51 173.9 0.0 2.0 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.24 gi|73670178|ref|YP_306193.1| - 8e-11 42.1 0.0 2.7e-10 40.4 0.0 2.0 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.19 gi|73670178|ref|YP_306193.1| - 2e-08 33.7 7.3 7.1e-08 32.0 7.3 2.0 1 0 0 1 1 1 1 UvrB/uvrC motif MSA-2c PF12238.8 gi|73670178|ref|YP_306193.1| - 2.2 8.2 4.2 17 5.3 0.0 2.2 2 0 0 2 2 2 0 Merozoite surface antigen 2c UvrA_inter PF17760.1 gi|73670179|ref|YP_306194.1| - 6.7e-31 106.6 0.2 3.6e-30 104.2 0.0 2.3 3 0 0 3 3 2 1 UvrA interaction domain UvrA_DNA-bind PF17755.1 gi|73670179|ref|YP_306194.1| - 8.4e-31 106.6 0.1 1.9e-28 99.0 0.0 3.5 4 0 0 4 4 2 1 UvrA DNA-binding domain ABC_tran PF00005.27 gi|73670179|ref|YP_306194.1| - 1.2e-20 74.4 1.0 1.2e-08 35.6 0.1 4.5 3 1 0 3 3 3 3 ABC transporter SMC_N PF02463.19 gi|73670179|ref|YP_306194.1| - 5e-11 42.4 0.0 0.0019 17.7 0.0 4.0 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73670179|ref|YP_306194.1| - 1.1e-08 34.6 0.3 0.0048 16.6 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|73670179|ref|YP_306194.1| - 2.2e-07 31.4 2.2 0.027 14.9 0.0 3.5 3 1 0 3 3 2 2 AAA ATPase domain AAA_21 PF13304.6 gi|73670179|ref|YP_306194.1| - 3.2e-07 30.5 7.6 0.17 11.7 0.0 4.6 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|73670179|ref|YP_306194.1| - 3.2e-07 30.7 0.6 0.22 11.8 0.0 4.0 4 0 0 4 4 4 2 AAA domain BCA_ABC_TP_C PF12399.8 gi|73670179|ref|YP_306194.1| - 8.4e-06 25.6 5.2 0.031 14.2 0.5 2.6 2 0 0 2 2 2 2 Branched-chain amino acid ATP-binding cassette transporter AAA_14 PF13173.6 gi|73670179|ref|YP_306194.1| - 8.9e-06 25.8 0.0 0.59 10.2 0.0 3.5 3 0 0 3 3 3 2 AAA domain AAA_25 PF13481.6 gi|73670179|ref|YP_306194.1| - 3.3e-05 23.6 0.2 0.21 11.2 0.0 3.1 3 0 0 3 3 3 2 AAA domain RsgA_GTPase PF03193.16 gi|73670179|ref|YP_306194.1| - 3.7e-05 23.7 0.1 0.18 11.7 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase Viral_helicase1 PF01443.18 gi|73670179|ref|YP_306194.1| - 4.6e-05 23.3 0.1 0.092 12.5 0.0 2.8 3 0 0 3 3 2 2 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.9 gi|73670179|ref|YP_306194.1| - 5.1e-05 22.7 0.3 0.074 12.3 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_18 PF13238.6 gi|73670179|ref|YP_306194.1| - 0.00011 22.7 0.1 0.34 11.5 0.0 3.2 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 gi|73670179|ref|YP_306194.1| - 0.00014 21.5 0.4 0.062 12.9 0.1 2.6 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DnaJ_CXXCXGXG PF00684.19 gi|73670179|ref|YP_306194.1| - 0.0002 21.6 7.7 0.032 14.6 0.5 3.8 3 1 0 3 3 3 1 DnaJ central domain T2SSE PF00437.20 gi|73670179|ref|YP_306194.1| - 0.0002 20.5 0.1 0.56 9.2 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_33 PF13671.6 gi|73670179|ref|YP_306194.1| - 0.00021 21.5 0.0 0.73 10.0 0.0 2.8 2 0 0 2 2 2 2 AAA domain APS_kinase PF01583.20 gi|73670179|ref|YP_306194.1| - 0.00032 20.6 0.2 0.93 9.4 0.0 2.6 2 0 0 2 2 2 2 Adenylylsulphate kinase AAA_24 PF13479.6 gi|73670179|ref|YP_306194.1| - 0.00037 20.3 1.0 0.65 9.7 0.1 3.2 3 0 0 3 3 3 2 AAA domain RNA_helicase PF00910.22 gi|73670179|ref|YP_306194.1| - 0.0023 18.3 0.0 0.59 10.5 0.0 2.9 2 0 0 2 2 2 1 RNA helicase AAA_15 PF13175.6 gi|73670179|ref|YP_306194.1| - 0.0036 17.1 9.3 4.9 6.7 0.1 5.0 5 0 0 5 5 5 0 AAA ATPase domain NACHT PF05729.12 gi|73670179|ref|YP_306194.1| - 0.0054 16.7 0.1 2.1 8.2 0.0 2.4 2 0 0 2 2 2 1 NACHT domain AAA_23 PF13476.6 gi|73670179|ref|YP_306194.1| - 0.007 16.9 14.2 0.014 15.9 0.1 3.7 4 1 0 4 4 3 2 AAA domain ATPase PF06745.13 gi|73670179|ref|YP_306194.1| - 0.0071 15.7 4.8 0.41 9.9 0.0 3.2 3 0 0 3 3 3 1 KaiC ATPase_2 PF01637.18 gi|73670179|ref|YP_306194.1| - 0.0088 16.0 0.0 2 8.3 0.0 3.0 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea MeaB PF03308.16 gi|73670179|ref|YP_306194.1| - 0.011 14.8 1.5 4.4 6.2 0.0 3.0 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_30 PF13604.6 gi|73670179|ref|YP_306194.1| - 0.024 14.3 0.5 11 5.7 0.2 2.9 3 0 0 3 3 3 0 AAA domain PRK PF00485.18 gi|73670179|ref|YP_306194.1| - 0.051 13.3 0.5 12 5.6 0.0 2.8 3 0 0 3 3 2 0 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.12 gi|73670179|ref|YP_306194.1| - 0.056 12.7 0.0 2.1 7.6 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin NTPase_1 PF03266.15 gi|73670179|ref|YP_306194.1| - 0.072 13.0 2.9 10 6.0 0.0 3.2 3 0 0 3 3 3 0 NTPase DAP3 PF10236.9 gi|73670179|ref|YP_306194.1| - 0.11 11.7 0.5 5.4 6.1 0.2 2.4 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AAA_28 PF13521.6 gi|73670179|ref|YP_306194.1| - 0.12 12.7 0.9 7.3 6.8 0.0 2.9 2 0 0 2 2 2 0 AAA domain CbiA PF01656.23 gi|73670179|ref|YP_306194.1| - 0.15 12.1 0.3 33 4.5 0.0 3.0 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain NB-ARC PF00931.22 gi|73670179|ref|YP_306194.1| - 0.15 11.2 0.9 9.6 5.3 0.0 3.0 4 0 0 4 4 3 0 NB-ARC domain MMR_HSR1 PF01926.23 gi|73670179|ref|YP_306194.1| - 0.23 11.5 0.9 29 4.8 0.0 3.5 4 0 0 4 4 3 0 50S ribosome-binding GTPase Lar_restr_allev PF14354.6 gi|73670179|ref|YP_306194.1| - 0.49 10.8 7.3 2.4 8.6 0.1 3.5 3 0 0 3 3 3 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.10 gi|73670179|ref|YP_306194.1| - 1.6 8.9 11.3 4.2 7.6 0.6 3.7 3 0 0 3 3 3 0 Zinc ribbon domain Anti-TRAP PF15777.5 gi|73670179|ref|YP_306194.1| - 5 7.2 15.0 1.2 9.2 0.6 4.1 5 0 0 5 5 4 0 Tryptophan RNA-binding attenuator protein inhibitory protein CAT PF00302.18 gi|73670180|ref|YP_306195.1| - 1.3e-44 152.6 4.8 1.5e-44 152.4 4.8 1.0 1 0 0 1 1 1 1 Chloramphenicol acetyltransferase AbiJ_NTD5 PF18865.1 gi|73670181|ref|YP_306196.1| - 0.074 12.9 0.2 2.2 8.1 0.0 2.5 2 1 1 3 3 3 0 AbiJ N-terminal domain 5 Nmad5 PF18757.1 gi|73670182|ref|YP_306197.1| - 0.036 14.3 0.2 0.043 14.0 0.2 1.1 1 0 0 1 1 1 0 Nucleotide modification associated domain 5 HTH_24 PF13412.6 gi|73670182|ref|YP_306197.1| - 0.058 13.0 0.2 0.086 12.4 0.2 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding FH2 PF02181.23 gi|73670182|ref|YP_306197.1| - 0.072 12.2 0.1 0.081 12.0 0.1 1.0 1 0 0 1 1 1 0 Formin Homology 2 Domain Folliculin PF11704.8 gi|73670182|ref|YP_306197.1| - 0.093 12.6 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport TssO PF17561.2 gi|73670183|ref|YP_306198.1| - 0.015 15.4 0.3 0.03 14.4 0.1 1.7 1 1 0 1 1 1 0 Type VI secretion system, TssO DUF1505 PF07403.11 gi|73670183|ref|YP_306198.1| - 0.1 12.8 0.2 0.17 12.0 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1505) DUF4834 PF16118.5 gi|73670183|ref|YP_306198.1| - 0.11 13.5 0.1 0.17 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) O-antigen_lig PF13425.6 gi|73670183|ref|YP_306198.1| - 0.14 10.9 0.9 0.15 10.9 0.9 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein TPR_2 PF07719.17 gi|73670185|ref|YP_306200.1| - 4.8e-42 138.7 42.5 9.1e-05 22.3 0.0 16.7 17 0 0 17 17 17 11 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670185|ref|YP_306200.1| - 1.1e-33 112.6 66.2 4.7e-05 23.3 0.6 16.1 16 0 0 16 16 15 8 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670185|ref|YP_306200.1| - 2.4e-29 101.6 5.0 7.4e-07 29.6 0.2 9.4 8 1 1 9 9 9 5 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73670185|ref|YP_306200.1| - 4.3e-28 95.9 65.3 0.00015 21.4 0.0 16.2 17 0 0 17 17 17 8 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670185|ref|YP_306200.1| - 5.2e-28 95.3 0.1 0.65 11.0 0.0 14.6 8 4 8 16 16 15 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670185|ref|YP_306200.1| - 2.4e-27 95.0 15.4 0.0034 17.6 0.2 10.7 9 3 1 10 10 10 7 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670185|ref|YP_306200.1| - 9.6e-21 72.2 15.9 0.045 13.8 0.2 12.6 13 0 0 13 13 13 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73670185|ref|YP_306200.1| - 1.3e-16 60.0 12.6 0.43 11.3 0.0 11.8 13 0 0 13 13 12 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670185|ref|YP_306200.1| - 2.2e-13 50.6 0.0 1.2 9.9 0.0 8.0 10 0 0 10 10 7 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73670185|ref|YP_306200.1| - 1.1e-12 47.4 19.9 9.8 6.8 0.0 13.2 14 0 0 14 14 13 0 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670185|ref|YP_306200.1| - 5.9e-12 45.6 35.2 5e-06 26.6 0.4 7.8 3 2 4 8 8 8 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 gi|73670185|ref|YP_306200.1| - 1.6e-10 40.5 35.2 0.044 13.5 0.0 12.1 11 2 2 13 13 12 4 TPR repeat TPR_20 PF14561.6 gi|73670185|ref|YP_306200.1| - 2.9e-10 40.3 2.1 0.0057 17.0 0.1 5.3 5 1 2 7 7 6 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670185|ref|YP_306200.1| - 1.2e-08 34.6 16.8 0.38 10.7 0.1 10.8 12 0 0 12 12 12 1 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73670185|ref|YP_306200.1| - 1.5e-08 34.4 0.0 0.016 14.6 0.0 5.8 3 2 3 6 6 6 1 MalT-like TPR region TPR_15 PF13429.6 gi|73670185|ref|YP_306200.1| - 4.3e-05 22.9 2.1 4.7 6.3 0.0 4.8 2 2 1 3 3 3 1 Tetratricopeptide repeat EST1_DNA_bind PF10373.9 gi|73670185|ref|YP_306200.1| - 0.0011 18.5 1.0 0.0075 15.8 0.0 2.6 2 0 0 2 2 2 1 Est1 DNA/RNA binding domain PknG_TPR PF16918.5 gi|73670185|ref|YP_306200.1| - 0.0087 14.8 0.0 1.9 7.2 0.1 3.3 4 0 0 4 4 4 1 Protein kinase G tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 gi|73670185|ref|YP_306200.1| - 0.0091 16.5 0.9 0.77 10.2 0.0 3.7 2 1 0 3 3 3 1 Alkyl sulfatase dimerisation PPR_1 PF12854.7 gi|73670185|ref|YP_306200.1| - 0.068 12.9 0.0 13 5.6 0.0 3.4 2 0 0 2 2 2 0 PPR repeat TPR_9 PF13371.6 gi|73670185|ref|YP_306200.1| - 0.071 13.3 0.0 29 4.9 0.0 4.3 4 1 1 5 5 4 0 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|73670185|ref|YP_306200.1| - 0.11 11.9 9.2 0.14 11.6 0.1 4.0 3 2 0 3 3 3 0 Coatomer epsilon subunit Complex1_LYR_2 PF13233.6 gi|73670185|ref|YP_306200.1| - 0.39 11.5 2.1 0.65 10.8 0.1 2.5 2 1 1 3 3 1 0 Complex1_LYR-like SPO22 PF08631.10 gi|73670185|ref|YP_306200.1| - 0.76 9.2 24.7 0.23 10.9 0.5 5.5 2 1 1 5 5 5 0 Meiosis protein SPO22/ZIP4 like LAGLIDADG_1 PF00961.19 gi|73670185|ref|YP_306200.1| - 5.9 7.9 9.8 3.9 8.5 0.6 4.1 3 0 0 3 3 3 0 LAGLIDADG endonuclease Alpha-2-MRAP_C PF06401.11 gi|73670186|ref|YP_306201.1| - 0.063 13.2 0.0 0.078 12.9 0.0 1.1 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain RsgA_N PF16745.5 gi|73670187|ref|YP_306202.1| - 0.044 13.5 0.0 0.071 12.9 0.0 1.3 1 0 0 1 1 1 0 RsgA N-terminal domain MFS_Mycoplasma PF07672.13 gi|73670188|ref|YP_306203.1| - 0.0086 15.4 0.3 0.012 14.9 0.3 1.3 1 1 0 1 1 1 1 Mycoplasma MFS transporter Romo1 PF10247.9 gi|73670188|ref|YP_306203.1| - 0.014 15.7 10.0 0.095 13.1 1.3 2.2 1 1 1 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 DUF3566 PF12089.8 gi|73670188|ref|YP_306203.1| - 0.019 15.4 0.0 0.021 15.2 0.0 1.1 1 0 0 1 1 1 0 Transmembrane domain of unknown function (DUF3566) Phage_Gp23 PF10669.9 gi|73670188|ref|YP_306203.1| - 0.031 14.6 0.6 0.043 14.2 0.6 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) MtrG PF04210.13 gi|73670188|ref|YP_306203.1| - 0.033 14.0 4.5 0.082 12.8 1.0 2.7 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G Aph-1 PF06105.12 gi|73670188|ref|YP_306203.1| - 0.033 13.6 0.9 0.061 12.7 0.9 1.4 1 1 0 1 1 1 0 Aph-1 protein DUF3169 PF11368.8 gi|73670188|ref|YP_306203.1| - 0.11 12.0 3.3 0.055 13.0 0.9 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3169) SPOB_a PF14689.6 gi|73670188|ref|YP_306203.1| - 0.12 12.1 0.1 0.22 11.2 0.1 1.4 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain BacteriocIIc_cy PF12173.8 gi|73670188|ref|YP_306203.1| - 0.17 12.2 5.8 1.3 9.3 5.8 2.2 1 1 0 1 1 1 0 Bacteriocin class IIc cyclic gassericin A-like Zip PF02535.22 gi|73670188|ref|YP_306203.1| - 0.17 11.1 0.0 0.17 11.1 0.0 1.8 1 1 1 2 2 2 0 ZIP Zinc transporter SPC12 PF06645.13 gi|73670188|ref|YP_306203.1| - 0.5 10.5 2.3 1.5 9.0 0.0 2.1 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) BPD_transp_2 PF02653.16 gi|73670188|ref|YP_306203.1| - 0.93 8.6 8.0 4.6 6.3 0.1 2.0 2 0 0 2 2 2 0 Branched-chain amino acid transport system / permease component Wzy_C PF04932.15 gi|73670188|ref|YP_306203.1| - 0.93 9.1 4.6 1 8.9 0.3 2.0 1 1 1 2 2 2 0 O-Antigen ligase Colicin_V PF02674.16 gi|73670188|ref|YP_306203.1| - 5.1 7.1 9.7 0.47 10.4 0.4 2.1 2 0 0 2 2 2 0 Colicin V production protein RsgA_GTPase PF03193.16 gi|73670189|ref|YP_306204.1| - 1.8e-45 154.9 0.2 3.6e-45 153.9 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase ABC_tran PF00005.27 gi|73670189|ref|YP_306204.1| - 2.6e-10 41.0 0.0 4.1e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter MMR_HSR1 PF01926.23 gi|73670189|ref|YP_306204.1| - 1.2e-09 38.3 0.1 2.5e-09 37.2 0.1 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|73670189|ref|YP_306204.1| - 4.7e-06 26.2 0.1 0.026 14.0 0.0 2.6 2 0 0 2 2 2 2 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|73670189|ref|YP_306204.1| - 6.8e-06 26.2 0.7 0.0018 18.4 0.4 2.4 1 1 1 2 2 2 1 Dynamin family Septin PF00735.18 gi|73670189|ref|YP_306204.1| - 7.7e-05 22.1 0.0 0.00012 21.5 0.0 1.2 1 0 0 1 1 1 1 Septin GTP_EFTU PF00009.27 gi|73670189|ref|YP_306204.1| - 0.00018 21.1 0.3 0.28 10.7 0.0 2.5 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain AAA_29 PF13555.6 gi|73670189|ref|YP_306204.1| - 0.00063 19.4 0.1 0.0014 18.4 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain PduV-EutP PF10662.9 gi|73670189|ref|YP_306204.1| - 0.00066 19.4 0.0 0.88 9.3 0.1 2.5 2 1 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.6 gi|73670189|ref|YP_306204.1| - 0.0027 18.1 0.0 0.0079 16.6 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AIG1 PF04548.16 gi|73670189|ref|YP_306204.1| - 0.0036 16.7 0.1 0.0058 16.0 0.1 1.3 1 0 0 1 1 1 1 AIG1 family Roc PF08477.13 gi|73670189|ref|YP_306204.1| - 0.017 15.4 0.1 0.046 13.9 0.1 1.8 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1_C PF08438.10 gi|73670189|ref|YP_306204.1| - 0.017 15.7 0.1 2.3 8.8 0.0 3.1 2 1 1 3 3 3 0 GTPase of unknown function C-terminal AAA_33 PF13671.6 gi|73670189|ref|YP_306204.1| - 0.028 14.6 0.0 0.081 13.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain MMR_HSR1_Xtn PF16897.5 gi|73670189|ref|YP_306204.1| - 0.028 14.4 0.1 1.5 8.9 0.0 2.6 3 0 0 3 3 2 0 C-terminal region of MMR_HSR1 domain cobW PF02492.19 gi|73670189|ref|YP_306204.1| - 0.033 13.8 0.2 2 8.0 0.1 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|73670189|ref|YP_306204.1| - 0.048 12.6 0.1 0.083 11.9 0.1 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF815 PF05673.13 gi|73670189|ref|YP_306204.1| - 0.048 12.8 0.1 0.082 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_22 PF13401.6 gi|73670189|ref|YP_306204.1| - 0.054 13.8 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|73670189|ref|YP_306204.1| - 0.055 13.6 0.7 0.19 11.8 0.3 1.9 2 0 0 2 2 2 0 Helicase HerA, central domain IstB_IS21 PF01695.17 gi|73670189|ref|YP_306204.1| - 0.065 13.0 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Guanylate_kin PF00625.21 gi|73670189|ref|YP_306204.1| - 0.071 12.8 0.0 0.17 11.6 0.0 1.6 1 0 0 1 1 1 0 Guanylate kinase AAA_21 PF13304.6 gi|73670189|ref|YP_306204.1| - 0.073 12.9 1.1 0.3 10.9 0.1 2.3 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 gi|73670189|ref|YP_306204.1| - 0.089 12.4 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|73670189|ref|YP_306204.1| - 0.097 12.9 0.2 0.2 11.9 0.2 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|73670189|ref|YP_306204.1| - 0.1 13.0 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|73670189|ref|YP_306204.1| - 0.11 12.9 0.0 0.21 12.0 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 gi|73670189|ref|YP_306204.1| - 0.15 11.6 0.1 0.32 10.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_18 PF13238.6 gi|73670189|ref|YP_306204.1| - 0.15 12.6 1.0 0.35 11.4 1.0 1.7 1 1 0 1 1 1 0 AAA domain Ras PF00071.22 gi|73670189|ref|YP_306204.1| - 0.16 11.6 0.1 2 8.0 0.1 2.2 2 0 0 2 2 2 0 Ras family AAA_23 PF13476.6 gi|73670189|ref|YP_306204.1| - 1.5 9.2 6.5 8.4 6.8 6.5 1.9 1 1 0 1 1 1 0 AAA domain DUF362 PF04015.12 gi|73670190|ref|YP_306205.1| - 6.3e-45 153.9 0.1 7.7e-45 153.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|73670190|ref|YP_306205.1| - 1e-15 56.8 18.3 1.3e-08 34.3 5.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73670190|ref|YP_306205.1| - 5.3e-12 45.3 15.7 1.6e-06 27.9 4.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73670190|ref|YP_306205.1| - 5.2e-11 42.5 7.1 6.6e-06 26.1 0.5 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73670190|ref|YP_306205.1| - 3.6e-10 40.3 9.2 6.4e-05 23.5 0.6 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73670190|ref|YP_306205.1| - 1.8e-09 38.4 6.1 7.6e-05 23.6 0.7 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|73670190|ref|YP_306205.1| - 3.4e-09 36.7 12.5 3.9e-05 23.7 2.5 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73670190|ref|YP_306205.1| - 3.9e-09 36.1 12.7 0.00025 21.0 2.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73670190|ref|YP_306205.1| - 1.2e-08 34.9 35.0 1.8e-06 28.0 12.7 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73670190|ref|YP_306205.1| - 5.9e-07 30.0 18.8 0.0023 18.8 6.4 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73670190|ref|YP_306205.1| - 8.5e-06 26.1 7.3 0.0042 17.5 0.4 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670190|ref|YP_306205.1| - 1.2e-05 25.5 15.8 0.0051 17.2 4.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Lar_N PF09861.9 gi|73670190|ref|YP_306205.1| - 0.00074 18.7 0.4 0.0011 18.2 0.4 1.3 1 0 0 1 1 1 1 Lactate racemase N-terminal domain Fer4_22 PF17179.4 gi|73670190|ref|YP_306205.1| - 0.0018 19.0 8.2 0.22 12.4 0.7 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73670190|ref|YP_306205.1| - 0.0042 17.6 12.8 0.18 12.4 2.6 2.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73670190|ref|YP_306205.1| - 0.0057 17.2 14.8 0.26 11.9 3.0 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I MinC_C PF03775.16 gi|73670190|ref|YP_306205.1| - 0.0084 16.1 0.5 0.016 15.2 0.5 1.4 1 0 0 1 1 1 1 Septum formation inhibitor MinC, C-terminal domain Fer4_18 PF13746.6 gi|73670190|ref|YP_306205.1| - 0.036 14.3 13.8 0.59 10.3 2.7 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73670190|ref|YP_306205.1| - 0.86 10.4 13.5 2.7 8.8 3.6 3.2 2 1 1 3 3 3 0 4Fe-4S single cluster domain DUF4177 PF13783.6 gi|73670191|ref|YP_306206.1| - 2e-05 24.8 0.5 3.3e-05 24.1 0.5 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4177) UPF0047 PF01894.17 gi|73670192|ref|YP_306207.1| - 2.2e-30 105.2 0.0 2.5e-30 105.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 Yae1_N PF09811.9 gi|73670193|ref|YP_306208.1| - 0.00067 19.3 2.3 0.23 11.2 0.2 2.7 2 0 0 2 2 2 2 Essential protein Yae1, N terminal DUF4692 PF15763.5 gi|73670193|ref|YP_306208.1| - 0.22 12.0 7.4 0.3 11.5 7.4 1.1 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) AF-4 PF05110.13 gi|73670193|ref|YP_306208.1| - 1.3 7.0 17.2 1.6 6.7 17.2 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein HAD_2 PF13419.6 gi|73670194|ref|YP_306209.1| - 9.1e-40 136.6 0.1 1.1e-39 136.4 0.1 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73670194|ref|YP_306209.1| - 1.3e-14 55.0 0.1 5.7e-13 49.6 0.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|73670194|ref|YP_306209.1| - 6.7e-09 35.7 0.0 1.5e-08 34.6 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|73670194|ref|YP_306209.1| - 8.8e-07 29.5 0.0 1.4e-06 28.9 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HTH_38 PF13936.6 gi|73670195|ref|YP_306210.1| - 0.00075 19.2 1.4 0.0017 18.0 1.4 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Zn_Tnp_IS1 PF03811.13 gi|73670195|ref|YP_306210.1| - 0.0011 18.7 2.4 0.0014 18.3 1.2 1.9 2 0 0 2 2 2 1 InsA N-terminal domain zf-BED PF02892.15 gi|73670195|ref|YP_306210.1| - 0.0041 17.1 0.2 0.0092 16.0 0.2 1.7 1 0 0 1 1 1 1 BED zinc finger IBR PF01485.21 gi|73670195|ref|YP_306210.1| - 0.039 14.2 3.6 0.045 14.0 2.3 1.8 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain zf-C2H2_4 PF13894.6 gi|73670195|ref|YP_306210.1| - 0.077 13.9 0.5 0.077 13.9 0.5 2.0 2 0 0 2 2 2 0 C2H2-type zinc finger Chromo PF00385.24 gi|73670195|ref|YP_306210.1| - 0.13 12.2 2.2 2.2 8.2 0.1 2.5 2 1 0 2 2 2 0 Chromo (CHRromatin Organisation MOdifier) domain Zn_Tnp_IS1595 PF12760.7 gi|73670195|ref|YP_306210.1| - 0.67 10.0 5.9 1.9 8.6 5.9 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain MFAP1 PF06991.11 gi|73670195|ref|YP_306210.1| - 0.86 9.4 4.0 0.28 11.0 1.3 1.5 2 0 0 2 2 2 0 Microfibril-associated/Pre-mRNA processing NPCBM_assoc PF10633.9 gi|73670196|ref|YP_306211.1| - 1.6e-06 28.3 0.3 0.0049 17.1 0.1 3.3 2 1 0 2 2 2 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF916 PF06030.12 gi|73670196|ref|YP_306211.1| - 9.7e-05 22.4 1.3 2.2 8.4 0.0 4.2 3 2 1 4 4 4 2 Bacterial protein of unknown function (DUF916) CBM60 PF16841.5 gi|73670196|ref|YP_306211.1| - 0.0065 16.9 0.1 1.1 9.7 0.0 3.0 3 0 0 3 3 3 1 Ca-dependent carbohydrate-binding module xylan-binding DUF4625 PF15418.6 gi|73670196|ref|YP_306211.1| - 0.041 14.1 0.5 0.83 9.9 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4625) BACON PF13004.7 gi|73670196|ref|YP_306211.1| - 0.073 13.1 3.2 0.082 12.9 0.2 2.7 2 1 0 2 2 2 0 Putative binding domain, N-terminal Chorein_N PF12624.7 gi|73670196|ref|YP_306211.1| - 0.074 13.2 0.0 27 4.9 0.0 3.0 3 0 0 3 3 3 0 N-terminal region of Chorein or VPS13 fn3_5 PF06280.12 gi|73670196|ref|YP_306211.1| - 0.11 13.2 3.8 1.1 9.9 0.3 3.5 2 2 1 3 3 3 0 Fn3-like domain E1_DerP2_DerF2 PF02221.15 gi|73670196|ref|YP_306211.1| - 0.15 12.5 0.3 12 6.3 0.0 2.8 2 1 0 2 2 2 0 ML domain BsuPI PF12690.7 gi|73670196|ref|YP_306211.1| - 0.23 11.5 2.6 2.8 8.0 0.1 3.8 4 2 1 5 5 5 0 Intracellular proteinase inhibitor Rhodanese PF00581.20 gi|73670197|ref|YP_306212.1| - 2.2e-26 92.5 0.1 7.5e-18 65.0 0.1 2.7 2 1 0 2 2 2 2 Rhodanese-like domain Lactamase_B PF00753.27 gi|73670197|ref|YP_306212.1| - 3.8e-12 46.6 0.1 9e-11 42.1 0.2 2.6 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily DUF1015 PF06245.11 gi|73670198|ref|YP_306213.1| - 2.1e-78 263.9 0.0 2.6e-78 263.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1015) DUF4136 PF13590.6 gi|73670200|ref|YP_306215.1| - 0.011 16.3 0.0 0.012 16.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4136) ABC_tran PF00005.27 gi|73670201|ref|YP_306216.1| - 8.1e-29 100.9 0.0 1.2e-28 100.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73670201|ref|YP_306216.1| - 6.8e-17 62.2 1.2 3.6e-08 33.6 0.3 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|73670201|ref|YP_306216.1| - 1.8e-06 27.6 2.3 0.00015 21.3 2.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|73670201|ref|YP_306216.1| - 3.5e-06 27.7 1.9 4.5e-06 27.3 1.8 1.6 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|73670201|ref|YP_306216.1| - 9.3e-06 25.6 3.8 3e-05 23.9 0.6 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|73670201|ref|YP_306216.1| - 2e-05 24.2 0.0 4.1e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_14 PF13173.6 gi|73670201|ref|YP_306216.1| - 0.00078 19.5 0.2 0.16 12.0 0.0 2.5 2 1 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 gi|73670201|ref|YP_306216.1| - 0.0015 17.4 0.2 0.034 13.0 0.0 2.5 2 1 0 2 2 2 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 gi|73670201|ref|YP_306216.1| - 0.0052 16.7 0.0 0.0095 15.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_27 PF13514.6 gi|73670201|ref|YP_306216.1| - 0.012 15.2 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain MukB PF04310.12 gi|73670201|ref|YP_306216.1| - 0.019 14.8 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 MukB N-terminal AAA_16 PF13191.6 gi|73670201|ref|YP_306216.1| - 0.031 14.7 0.0 0.038 14.4 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.6 gi|73670201|ref|YP_306216.1| - 0.056 13.7 0.1 1.8 8.8 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MutS_V PF00488.21 gi|73670201|ref|YP_306216.1| - 0.081 12.9 0.1 0.93 9.5 0.0 2.1 2 0 0 2 2 2 0 MutS domain V DUF2813 PF11398.8 gi|73670201|ref|YP_306216.1| - 0.093 12.0 0.0 0.18 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) FecCD PF01032.18 gi|73670202|ref|YP_306217.1| - 2.3e-89 299.5 32.8 3e-89 299.1 32.8 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|73670202|ref|YP_306217.1| - 0.011 15.2 21.9 0.0087 15.6 20.1 1.8 1 1 0 1 1 1 0 ABC 3 transport family MAP17 PF15807.5 gi|73670202|ref|YP_306217.1| - 1.3 9.2 2.9 4 7.7 0.4 2.4 2 0 0 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Peripla_BP_2 PF01497.18 gi|73670203|ref|YP_306218.1| - 4.3e-35 121.4 0.0 5.9e-35 120.9 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Methyltransf_23 PF13489.6 gi|73670205|ref|YP_306220.1| - 3.6e-11 43.2 0.0 5.8e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670205|ref|YP_306220.1| - 1.3e-09 38.6 0.0 2.5e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|73670205|ref|YP_306220.1| - 1.1e-07 31.2 0.0 1.5e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Cons_hypoth95 PF03602.15 gi|73670205|ref|YP_306220.1| - 1.2e-07 31.6 0.0 1.7e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_12 PF08242.12 gi|73670205|ref|YP_306220.1| - 5e-07 30.4 0.0 9e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|73670205|ref|YP_306220.1| - 1.3e-06 27.8 0.0 2.3e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_31 PF13847.6 gi|73670205|ref|YP_306220.1| - 6.5e-06 26.0 0.0 7.9e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73670205|ref|YP_306220.1| - 1.7e-05 24.4 0.0 2.8e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|73670205|ref|YP_306220.1| - 3.2e-05 23.8 0.0 4.8e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.12 gi|73670205|ref|YP_306220.1| - 3.3e-05 24.5 0.0 5.9e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|73670205|ref|YP_306220.1| - 0.00029 20.3 0.0 0.00055 19.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 gi|73670205|ref|YP_306220.1| - 0.00031 20.2 0.1 0.00048 19.6 0.1 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_16 PF10294.9 gi|73670205|ref|YP_306220.1| - 0.00071 19.4 0.1 0.0013 18.5 0.1 1.5 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_15 PF09445.10 gi|73670205|ref|YP_306220.1| - 0.00082 19.0 0.0 0.0014 18.3 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase CMAS PF02353.20 gi|73670205|ref|YP_306220.1| - 0.0014 18.0 0.0 0.0029 16.9 0.0 1.5 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase DREV PF05219.12 gi|73670205|ref|YP_306220.1| - 0.0019 17.4 0.0 0.0033 16.6 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_18 PF12847.7 gi|73670205|ref|YP_306220.1| - 0.01 15.8 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|73670205|ref|YP_306220.1| - 0.012 15.3 0.0 0.017 14.8 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_4 PF02390.17 gi|73670205|ref|YP_306220.1| - 0.016 14.7 0.0 0.028 13.9 0.0 1.4 1 0 0 1 1 1 0 Putative methyltransferase Met_10 PF02475.16 gi|73670205|ref|YP_306220.1| - 0.024 14.4 0.0 0.035 13.9 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein MetW PF07021.12 gi|73670205|ref|YP_306220.1| - 0.055 13.1 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW OrfB_IS605 PF01385.19 gi|73670206|ref|YP_306221.1| - 1.7e-27 96.0 1.0 3.4e-27 95.0 1.0 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73670206|ref|YP_306221.1| - 1.7e-21 75.9 0.2 3.1e-21 75.1 0.2 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73670206|ref|YP_306221.1| - 1.9e-20 72.1 0.3 3.4e-20 71.2 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73670206|ref|YP_306221.1| - 0.0028 17.8 1.6 0.0056 16.8 0.6 1.9 2 0 0 2 2 2 1 Piccolo Zn-finger DZR PF12773.7 gi|73670206|ref|YP_306221.1| - 0.15 12.1 0.5 0.28 11.3 0.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 gi|73670206|ref|YP_306221.1| - 0.16 12.0 0.0 0.29 11.1 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-Sec23_Sec24 PF04810.15 gi|73670206|ref|YP_306221.1| - 4.8 7.3 5.5 1.8 8.7 1.7 2.3 2 1 0 2 2 2 0 Sec23/Sec24 zinc finger zf-RanBP PF00641.18 gi|73670206|ref|YP_306221.1| - 8.6 5.8 8.5 18 4.7 0.5 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others DUF3283 PF11686.8 gi|73670207|ref|YP_306222.1| - 3.6 7.5 5.8 86 3.1 0.0 3.9 4 1 0 4 4 4 0 Protein of unknown function (DUF3283) TetR_N PF00440.23 gi|73670208|ref|YP_306223.1| - 8.8e-17 60.6 0.0 1.4e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 gi|73670208|ref|YP_306223.1| - 0.00014 22.0 0.0 0.00024 21.3 0.0 1.4 1 1 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal HTH_Tnp_1_2 PF13022.6 gi|73670208|ref|YP_306223.1| - 0.0024 18.0 0.0 0.0055 16.8 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix of insertion element transposase HTH_22 PF13309.6 gi|73670208|ref|YP_306223.1| - 0.013 15.5 0.0 0.026 14.6 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_Tnp_ISL3 PF13542.6 gi|73670208|ref|YP_306223.1| - 0.029 13.8 0.0 0.18 11.3 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 gi|73670208|ref|YP_306223.1| - 0.044 13.6 0.0 0.11 12.3 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain TetR_C_21 PF17926.1 gi|73670208|ref|YP_306223.1| - 0.095 12.8 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain HTH_17 PF12728.7 gi|73670208|ref|YP_306223.1| - 0.11 12.7 0.1 0.4 10.9 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|73670208|ref|YP_306223.1| - 0.12 12.5 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase LCM PF04072.14 gi|73670209|ref|YP_306224.1| - 1.3e-52 178.5 0.0 2e-52 177.9 0.0 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Amidohydro_3 PF07969.11 gi|73670210|ref|YP_306225.1| - 3e-101 340.2 0.0 3.4e-101 340.1 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|73670210|ref|YP_306225.1| - 1e-08 34.9 0.0 2.4e-05 23.8 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase family Cytochrom_B558a PF05038.13 gi|73670210|ref|YP_306225.1| - 0.071 12.7 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit Pterin_bind PF00809.22 gi|73670210|ref|YP_306225.1| - 0.15 11.7 0.0 0.32 10.6 0.0 1.6 1 0 0 1 1 1 0 Pterin binding enzyme NikR_C PF08753.11 gi|73670211|ref|YP_306226.1| - 1.5e-28 98.8 0.1 2e-28 98.3 0.1 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|73670211|ref|YP_306226.1| - 2.2e-09 36.9 0.0 4.9e-09 35.8 0.0 1.6 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|73670211|ref|YP_306226.1| - 0.0056 16.8 0.0 0.0099 16.0 0.0 1.4 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system RHH_8 PF17723.1 gi|73670211|ref|YP_306226.1| - 0.05 13.8 0.0 0.068 13.4 0.0 1.3 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family IL11 PF07400.11 gi|73670211|ref|YP_306226.1| - 0.17 11.5 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 Interleukin 11 Pyridoxal_deC PF00282.19 gi|73670212|ref|YP_306227.1| - 2.6e-67 227.2 0.0 3.1e-67 226.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|73670212|ref|YP_306227.1| - 7.1e-08 31.8 0.0 1.1e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DUF5039 PF16442.5 gi|73670213|ref|YP_306228.1| - 0.024 14.2 4.2 0.022 14.3 2.7 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5039) Ly49 PF08391.10 gi|73670213|ref|YP_306228.1| - 0.071 13.5 0.0 0.16 12.3 0.0 1.6 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region DUF3040 PF11239.8 gi|73670214|ref|YP_306229.1| - 0.07 13.4 0.4 0.089 13.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) LapA_dom PF06305.11 gi|73670214|ref|YP_306229.1| - 0.1 12.4 1.6 0.28 11.0 0.4 1.9 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain TNFR_16_TM PF18422.1 gi|73670214|ref|YP_306229.1| - 1.1 9.3 5.7 0.9 9.5 0.6 2.2 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain FGE-sulfatase PF03781.16 gi|73670215|ref|YP_306230.1| - 1.8e-47 162.1 3.7 1.8e-47 162.1 3.7 2.4 2 1 0 2 2 2 1 Sulfatase-modifying factor enzyme 1 DUF1724 PF08350.10 gi|73670216|ref|YP_306231.1| - 7.1e-17 61.3 0.0 1.4e-16 60.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|73670216|ref|YP_306231.1| - 1.8e-07 30.9 0.3 3.6e-07 29.9 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73670216|ref|YP_306231.1| - 6.2e-05 23.0 0.0 0.00015 21.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|73670216|ref|YP_306231.1| - 9.8e-05 22.2 0.1 0.00019 21.3 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|73670216|ref|YP_306231.1| - 0.001 19.0 0.5 0.0017 18.3 0.5 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_11 PF08279.12 gi|73670216|ref|YP_306231.1| - 0.0013 18.7 0.6 0.0032 17.4 0.6 1.7 1 0 0 1 1 1 1 HTH domain HTH_34 PF13601.6 gi|73670216|ref|YP_306231.1| - 0.03 14.5 0.1 0.077 13.2 0.1 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|73670216|ref|YP_306231.1| - 0.044 13.7 0.0 0.085 12.8 0.0 1.4 1 0 0 1 1 1 0 MarR family Fe_dep_repress PF01325.19 gi|73670216|ref|YP_306231.1| - 0.072 13.3 0.3 0.27 11.4 0.1 2.0 1 1 1 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 gi|73670216|ref|YP_306231.1| - 0.081 12.5 0.5 0.57 9.8 0.5 2.3 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding 3HBOH PF10605.9 gi|73670217|ref|YP_306232.1| - 0.22 9.7 0.0 0.23 9.6 0.0 1.0 1 0 0 1 1 1 0 3HB-oligomer hydrolase (3HBOH) DPPIV_N PF00930.21 gi|73670219|ref|YP_306234.1| - 0.0023 16.8 34.3 0.59 8.8 0.3 8.4 1 1 5 8 8 8 5 Dipeptidyl peptidase IV (DPP IV) N-terminal region dUTPase PF00692.19 gi|73670219|ref|YP_306234.1| - 0.0039 16.9 1.3 0.54 10.0 0.0 4.1 4 0 0 4 4 4 1 dUTPase Kelch_4 PF13418.6 gi|73670219|ref|YP_306234.1| - 0.046 13.7 12.9 1.2e+02 2.8 0.0 8.9 10 0 0 10 10 10 0 Galactose oxidase, central domain DUF5074 PF16819.5 gi|73670219|ref|YP_306234.1| - 0.12 12.4 35.9 6.8 6.8 0.4 9.1 4 3 6 10 10 10 0 Domain of unknown function (DUF5074) TMEM135_C_rich PF15982.5 gi|73670219|ref|YP_306234.1| - 0.13 12.8 0.3 29 5.3 0.0 4.6 5 1 1 6 6 6 0 N-terminal cysteine-rich region of Transmembrane protein 135 tRNA_synthFbeta PF17759.1 gi|73670220|ref|YP_306235.1| - 8.1e-44 149.6 0.1 1.3e-43 148.9 0.1 1.4 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|73670220|ref|YP_306235.1| - 6.4e-19 68.0 0.8 1.2e-17 64.0 0.2 2.6 2 0 0 2 2 2 1 tRNA synthetase B5 domain B3_4 PF03483.17 gi|73670220|ref|YP_306235.1| - 8.3e-16 58.1 0.0 3.3e-15 56.2 0.0 1.9 2 0 0 2 2 2 1 B3/4 domain tRNA-synt_2d PF01409.20 gi|73670220|ref|YP_306235.1| - 1.6e-06 27.8 0.2 1.1e-05 25.1 0.1 2.2 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) PhetRS_B1 PF18262.1 gi|73670220|ref|YP_306235.1| - 4.3e-05 23.7 0.1 0.62 10.3 0.1 3.2 2 1 0 2 2 2 2 Phe-tRNA synthetase beta subunit B1 domain RNase_HII PF01351.18 gi|73670221|ref|YP_306236.1| - 6.5e-50 169.7 0.1 7.5e-50 169.5 0.1 1.0 1 0 0 1 1 1 1 Ribonuclease HII DUF3656 PF12392.8 gi|73670221|ref|YP_306236.1| - 0.017 15.8 1.8 14 6.4 0.6 3.0 2 1 1 3 3 3 0 Collagenase NosD PF05048.13 gi|73670222|ref|YP_306237.1| - 5.3e-49 166.6 54.7 9.1e-47 159.3 34.2 2.1 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670222|ref|YP_306237.1| - 1.8e-16 60.4 27.3 1.8e-16 60.4 27.3 3.0 1 1 2 3 3 3 2 Right handed beta helix region Pectinesterase PF01095.19 gi|73670222|ref|YP_306237.1| - 0.0029 16.4 1.2 0.005 15.6 1.2 1.3 1 0 0 1 1 1 1 Pectinesterase GATase_5 PF13507.6 gi|73670223|ref|YP_306238.1| - 7.1e-48 163.0 0.0 8.2e-48 162.7 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|73670223|ref|YP_306238.1| - 2.2e-10 40.6 0.0 3.3e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|73670223|ref|YP_306238.1| - 3.2e-09 36.8 0.0 4.7e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.14 gi|73670223|ref|YP_306238.1| - 9.2e-09 35.2 0.0 1.8e-08 34.2 0.0 1.5 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 gi|73670223|ref|YP_306238.1| - 2.1e-05 24.5 0.0 8.5e-05 22.5 0.0 1.8 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|73670223|ref|YP_306238.1| - 0.0019 18.0 0.1 0.0024 17.7 0.1 1.5 1 1 0 1 1 1 1 Peptidase C26 PurS PF02700.14 gi|73670224|ref|YP_306239.1| - 3.6e-26 91.1 0.3 4e-26 91.0 0.3 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase DDE_Tnp_1 PF01609.21 gi|73670225|ref|YP_306240.1| - 8.3e-21 74.6 0.9 1.1e-20 74.2 0.9 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|73670225|ref|YP_306240.1| - 0.00011 22.3 1.2 0.0039 17.2 0.0 2.2 2 0 0 2 2 2 2 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73670225|ref|YP_306240.1| - 0.016 14.9 0.3 0.41 10.3 0.3 2.2 1 1 0 1 1 1 0 DDE superfamily endonuclease Trypsin_2 PF13365.6 gi|73670226|ref|YP_306241.1| - 2.2e-15 57.9 0.4 6.3e-15 56.4 0.1 1.8 2 0 0 2 2 2 1 Trypsin-like peptidase domain Trypsin PF00089.26 gi|73670226|ref|YP_306241.1| - 2.1e-10 40.8 0.1 2.8e-08 33.9 0.1 2.2 1 1 0 1 1 1 1 Trypsin Peptidase_S46 PF10459.9 gi|73670226|ref|YP_306241.1| - 0.00013 20.8 2.0 0.00014 20.6 0.1 1.9 2 0 0 2 2 2 1 Peptidase S46 Peptidase_S7 PF00949.21 gi|73670226|ref|YP_306241.1| - 0.14 11.9 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease Rep_2 PF01719.17 gi|73670227|ref|YP_306242.1| - 0.11 12.3 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Plasmid replication protein UPF0228 PF05727.11 gi|73670228|ref|YP_306243.1| - 5.1e-18 65.1 12.3 1.1e-17 64.0 11.2 2.1 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0228) Inhibitor_I48 PF10467.9 gi|73670228|ref|YP_306243.1| - 0.06 13.2 1.3 0.11 12.4 1.3 1.5 1 1 0 1 1 1 0 Peptidase inhibitor clitocypin ETRAMP PF09716.10 gi|73670228|ref|YP_306243.1| - 0.064 13.3 1.5 0.11 12.6 1.5 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) ABC2_membrane_3 PF12698.7 gi|73670228|ref|YP_306243.1| - 0.13 11.3 2.8 0.2 10.7 2.8 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF1724 PF08350.10 gi|73670229|ref|YP_306244.1| - 4.1e-19 68.5 0.0 7.4e-19 67.7 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) TrmB PF01978.19 gi|73670229|ref|YP_306244.1| - 0.0059 16.5 0.4 0.012 15.4 0.4 1.6 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|73670229|ref|YP_306244.1| - 0.014 15.4 0.1 0.031 14.2 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_5 PF01022.20 gi|73670229|ref|YP_306244.1| - 0.015 15.2 0.3 0.029 14.2 0.3 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|73670229|ref|YP_306244.1| - 0.045 14.3 0.1 0.088 13.3 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|73670229|ref|YP_306244.1| - 1.1 9.6 5.4 0.43 10.8 0.2 2.9 3 1 1 4 4 4 0 Iron dependent repressor, N-terminal DNA binding domain Lactamase_B PF00753.27 gi|73670230|ref|YP_306245.1| - 0.00083 19.4 1.1 0.0019 18.2 1.1 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|73670230|ref|YP_306245.1| - 0.046 13.2 0.0 0.085 12.4 0.0 1.6 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|73670230|ref|YP_306245.1| - 0.16 11.8 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain AI-2E_transport PF01594.16 gi|73670231|ref|YP_306246.1| - 6.4e-40 137.3 44.0 8.2e-40 136.9 44.0 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF5408 PF17402.2 gi|73670231|ref|YP_306246.1| - 6.7 6.7 8.0 12 5.9 1.0 3.3 2 0 0 2 2 2 0 Family of unknown function (DUF5408) IMS PF00817.20 gi|73670232|ref|YP_306247.1| - 2.8e-45 154.0 0.0 4e-45 153.5 0.0 1.2 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 gi|73670232|ref|YP_306247.1| - 7.4e-17 62.1 0.7 1.1e-16 61.5 0.7 1.3 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|73670232|ref|YP_306247.1| - 2e-10 40.3 0.0 6.6e-10 38.7 0.0 2.0 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.6 gi|73670232|ref|YP_306247.1| - 0.00014 22.4 0.1 0.00088 19.8 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|73670232|ref|YP_306247.1| - 0.0012 19.1 0.0 0.0027 17.9 0.0 1.6 1 0 0 1 1 1 1 Pathogenicity locus DNA_pol_lambd_f PF10391.9 gi|73670232|ref|YP_306247.1| - 0.039 13.8 0.0 0.084 12.7 0.0 1.5 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda HHH PF00633.23 gi|73670232|ref|YP_306247.1| - 0.061 13.2 0.0 0.19 11.6 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix motif NosD PF05048.13 gi|73670233|ref|YP_306248.1| - 1e-41 142.8 64.2 1.1e-22 80.5 25.6 2.5 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670233|ref|YP_306248.1| - 3.8e-35 121.1 68.7 3.1e-21 75.8 30.1 2.7 2 1 1 3 3 3 2 Right handed beta helix region Peptidase_M48 PF01435.18 gi|73670235|ref|YP_306250.1| - 1.6e-07 31.3 0.0 3e-07 30.4 0.0 1.5 1 0 0 1 1 1 1 Peptidase family M48 MASE2 PF05230.11 gi|73670235|ref|YP_306250.1| - 0.044 13.9 12.7 0.3 11.2 0.1 3.8 3 0 0 3 3 3 0 MASE2 domain DUF4267 PF14087.6 gi|73670235|ref|YP_306250.1| - 0.063 13.4 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4267) ATP-synt_10 PF05176.14 gi|73670237|ref|YP_306252.1| - 2.8e-14 53.0 0.0 4.1e-14 52.4 0.0 1.2 1 0 0 1 1 1 1 ATP10 protein GSDH PF07995.11 gi|73670238|ref|YP_306253.1| - 6.6e-20 71.7 0.0 3.9e-19 69.1 0.0 2.2 1 1 0 1 1 1 1 Glucose / Sorbosone dehydrogenase SGL PF08450.12 gi|73670238|ref|YP_306253.1| - 6e-05 22.7 0.0 0.00043 19.9 0.0 2.1 2 1 1 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|73670238|ref|YP_306253.1| - 6.3e-05 22.8 1.8 0.96 9.6 0.0 4.3 5 0 0 5 5 5 2 NHL repeat Rubrerythrin PF02915.17 gi|73670239|ref|YP_306254.1| - 6.9e-07 29.7 1.5 8.5e-07 29.5 1.5 1.1 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.10 gi|73670239|ref|YP_306254.1| - 9.5e-05 22.7 0.6 0.00012 22.4 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) DUF4142 PF13628.6 gi|73670239|ref|YP_306254.1| - 0.00012 22.3 0.2 0.00019 21.6 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4142) COQ7 PF03232.13 gi|73670239|ref|YP_306254.1| - 0.00034 20.5 0.2 0.00041 20.2 0.2 1.1 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 Ferritin PF00210.24 gi|73670239|ref|YP_306254.1| - 0.0036 17.2 0.5 0.0048 16.8 0.5 1.2 1 0 0 1 1 1 1 Ferritin-like domain DUF2202 PF09968.9 gi|73670239|ref|YP_306254.1| - 0.0085 16.0 0.5 0.012 15.5 0.5 1.3 1 0 0 1 1 1 1 Uncharacterized protein domain (DUF2202) Ferritin_2 PF13668.6 gi|73670239|ref|YP_306254.1| - 0.011 15.9 0.1 0.012 15.8 0.1 1.1 1 0 0 1 1 1 0 Ferritin-like domain HTH_29 PF13551.6 gi|73670240|ref|YP_306255.1| - 8.7e-07 28.9 0.0 1.2e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.6 gi|73670240|ref|YP_306255.1| - 2.9e-06 26.9 0.0 5e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_32 PF13565.6 gi|73670240|ref|YP_306255.1| - 3e-06 27.7 0.0 6e-06 26.8 0.0 1.5 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|73670240|ref|YP_306255.1| - 0.00036 20.6 0.0 0.00054 20.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Terminase_5 PF06056.12 gi|73670240|ref|YP_306255.1| - 0.00057 19.7 0.0 0.0035 17.2 0.0 2.1 2 0 0 2 2 2 1 Putative ATPase subunit of terminase (gpP-like) HTH_Tnp_4 PF13613.6 gi|73670240|ref|YP_306255.1| - 0.043 13.6 0.0 0.1 12.3 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_11 PF08279.12 gi|73670240|ref|YP_306255.1| - 0.055 13.4 0.0 0.18 11.8 0.0 1.8 1 1 1 2 2 2 0 HTH domain HTH_30 PF13556.6 gi|73670240|ref|YP_306255.1| - 0.055 13.3 0.0 0.092 12.6 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain LZ_Tnp_IS481 PF13011.6 gi|73670240|ref|YP_306255.1| - 0.17 12.4 0.0 0.23 12.0 0.0 1.2 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 HTH_Tnp_1_2 PF13022.6 gi|73670240|ref|YP_306255.1| - 0.19 11.9 0.0 0.27 11.4 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix of insertion element transposase Radical_SAM PF04055.21 gi|73670241|ref|YP_306256.1| - 5.2e-17 62.7 2.5 8.3e-17 62.1 0.0 2.4 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73670241|ref|YP_306256.1| - 1.2e-06 28.8 0.2 3.1e-06 27.5 0.2 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73670241|ref|YP_306256.1| - 6.8e-06 26.2 1.0 1.8e-05 24.9 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S single cluster domain SepF PF04472.12 gi|73670241|ref|YP_306256.1| - 0.0084 16.4 0.0 3 8.2 0.0 2.8 3 0 0 3 3 3 2 Cell division protein SepF Glyco_hydro_130 PF04041.13 gi|73670242|ref|YP_306257.1| - 3.9e-58 196.9 0.0 5.2e-58 196.5 0.0 1.0 1 0 0 1 1 1 1 beta-1,4-mannooligosaccharide phosphorylase E1-E2_ATPase PF00122.20 gi|73670243|ref|YP_306258.1| - 1.3e-52 177.9 1.4 1.3e-52 177.9 1.4 3.8 4 0 0 4 4 4 2 E1-E2 ATPase Hydrolase PF00702.26 gi|73670243|ref|YP_306258.1| - 4.2e-26 92.5 1.0 6.7e-26 91.9 1.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|73670243|ref|YP_306258.1| - 1.6e-05 24.7 5.5 6.7e-05 22.7 0.4 2.7 2 1 0 3 3 3 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|73670243|ref|YP_306258.1| - 0.014 15.8 0.0 0.024 15.0 0.0 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 gi|73670244|ref|YP_306259.1| - 4.8e-53 179.4 1.5 4.8e-53 179.4 1.5 3.6 4 0 0 4 4 4 2 E1-E2 ATPase Hydrolase PF00702.26 gi|73670244|ref|YP_306259.1| - 4.2e-25 89.3 0.5 6.9e-25 88.6 0.5 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|73670244|ref|YP_306259.1| - 6.2e-15 54.6 0.0 6.2e-15 54.6 0.0 2.0 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|73670244|ref|YP_306259.1| - 1.1e-05 25.3 3.8 0.00014 21.7 1.1 2.7 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase MS_channel PF00924.18 gi|73670245|ref|YP_306260.1| - 7.7e-26 90.9 4.9 7.7e-26 90.9 4.9 2.0 2 1 0 2 2 2 1 Mechanosensitive ion channel Phage_holin_5_2 PF16079.5 gi|73670245|ref|YP_306260.1| - 0.48 10.8 6.1 1.7 9.0 2.8 2.6 1 1 1 2 2 2 0 Phage holin family Hol44, in holin superfamily V AgrB PF04647.15 gi|73670245|ref|YP_306260.1| - 0.67 9.2 14.8 1.1 8.5 14.8 1.3 1 0 0 1 1 1 0 Accessory gene regulator B MFS_1 PF07690.16 gi|73670245|ref|YP_306260.1| - 1.1 8.1 13.4 1.4 7.7 13.4 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF2417 PF10329.9 gi|73670245|ref|YP_306260.1| - 2.8 7.3 9.3 5 6.5 9.3 1.4 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF4131 PF13567.6 gi|73670245|ref|YP_306260.1| - 7.9 6.1 9.9 1.6 8.4 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) MS_channel PF00924.18 gi|73670246|ref|YP_306261.1| - 9.6e-36 123.3 0.3 1.5e-35 122.7 0.3 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel TctA PF01970.16 gi|73670246|ref|YP_306261.1| - 0.0069 15.2 4.1 0.0099 14.6 4.1 1.2 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family ATP-synt_ab_Xtn PF16886.5 gi|73670246|ref|YP_306261.1| - 0.17 11.7 0.1 0.32 10.9 0.1 1.4 1 0 0 1 1 1 0 ATPsynthase alpha/beta subunit N-term extension SMC_ScpB PF04079.16 gi|73670247|ref|YP_306262.1| - 0.0038 16.9 0.1 0.0077 15.9 0.1 1.5 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB PKD PF00801.20 gi|73670248|ref|YP_306263.1| - 7.6e-147 477.4 124.6 2.1e-15 56.3 3.2 13.7 13 0 0 13 13 13 12 PKD domain DUF3344 PF11824.8 gi|73670248|ref|YP_306263.1| - 8.5e-111 370.0 34.2 9.6e-78 261.6 16.8 7.4 8 3 1 9 9 5 2 Protein of unknown function (DUF3344) PQQ_3 PF13570.6 gi|73670248|ref|YP_306263.1| - 1.7e-62 206.4 45.6 3.5e-10 40.0 1.5 9.8 9 0 0 9 9 8 8 PQQ-like domain PQQ PF01011.21 gi|73670248|ref|YP_306263.1| - 7.7e-39 129.8 50.5 1e-06 28.4 0.6 10.8 11 0 0 11 11 11 8 PQQ enzyme repeat CARDB PF07705.11 gi|73670248|ref|YP_306263.1| - 7.1e-22 77.6 5.3 7.1e-22 77.6 5.3 9.5 11 2 1 12 12 10 2 CARDB MG2 PF01835.19 gi|73670248|ref|YP_306263.1| - 1.4e-15 57.5 45.3 0.081 13.4 0.1 11.8 7 3 5 12 12 11 6 MG2 domain PKD_3 PF16820.5 gi|73670248|ref|YP_306263.1| - 2.9e-13 49.3 50.4 0.013 15.3 0.2 12.6 12 0 0 12 12 12 6 PKD-like domain Big_2 PF02368.18 gi|73670248|ref|YP_306263.1| - 2e-09 37.2 6.0 2e-09 37.2 6.0 8.7 11 0 0 11 11 9 1 Bacterial Ig-like domain (group 2) LPD25 PF18840.1 gi|73670248|ref|YP_306263.1| - 0.0022 18.5 1.3 63 4.2 0.0 6.2 6 0 0 6 6 6 0 Large polyvalent protein associated domain 25 Reg_prop PF07494.11 gi|73670248|ref|YP_306263.1| - 0.004 17.2 14.6 16 6.1 0.1 8.1 7 0 0 7 7 7 0 Two component regulator propeller DUF2381 PF09544.10 gi|73670248|ref|YP_306263.1| - 0.011 15.2 2.7 27 4.2 0.0 5.9 8 0 0 8 8 8 0 Protein of unknown function (DUF2381) CBM_26 PF16824.5 gi|73670248|ref|YP_306263.1| - 0.078 13.1 0.4 1.2e+02 2.8 0.0 4.9 4 1 0 4 4 4 0 C-terminal carbohydrate-binding module Chitin_synth_1 PF01644.17 gi|73670248|ref|YP_306263.1| - 0.3 11.0 1.5 15 5.5 0.0 4.0 4 0 0 4 4 4 0 Chitin synthase DUF4625 PF15418.6 gi|73670248|ref|YP_306263.1| - 0.61 10.3 26.7 2 8.7 0.0 8.7 10 0 0 10 10 10 0 Domain of unknown function (DUF4625) EF-hand_1 PF00036.32 gi|73670248|ref|YP_306263.1| - 1.9 8.3 7.1 18 5.2 0.3 4.0 3 0 0 3 3 3 0 EF hand DUF3400 PF11880.8 gi|73670248|ref|YP_306263.1| - 2.2 7.9 3.8 28 4.3 0.0 4.2 4 0 0 4 4 4 0 Domain of unknown function (DUF3400) DUF3324 PF11797.8 gi|73670248|ref|YP_306263.1| - 2.5 8.1 29.0 4.1 7.4 0.4 9.2 9 2 2 11 11 11 0 Protein of unknown function C-terminal (DUF3324) CopC PF04234.12 gi|73670248|ref|YP_306263.1| - 6.5 7.9 32.8 0.8 10.8 0.1 9.9 11 1 1 12 12 10 0 CopC domain PKD PF00801.20 gi|73670249|ref|YP_306264.1| - 7.6e-125 406.9 104.0 1.6e-13 50.3 3.0 12.6 11 0 0 11 11 11 10 PKD domain DUF3344 PF11824.8 gi|73670249|ref|YP_306264.1| - 1.6e-97 326.4 42.4 9.6e-68 228.8 21.0 6.7 7 3 0 7 7 4 2 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|73670249|ref|YP_306264.1| - 4.1e-60 200.4 41.4 1.2e-24 86.5 6.2 10.9 12 3 3 15 15 13 4 CARDB VCBS PF13517.6 gi|73670249|ref|YP_306264.1| - 1.2e-15 57.8 43.9 2.9e-08 34.2 2.6 9.6 7 2 4 11 11 9 5 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella MG2 PF01835.19 gi|73670249|ref|YP_306264.1| - 5.8e-11 42.7 36.8 0.05 14.0 0.1 10.9 7 2 4 11 11 10 4 MG2 domain FG-GAP PF01839.23 gi|73670249|ref|YP_306264.1| - 3.3e-07 30.3 56.7 0.0063 16.6 4.9 7.6 8 0 0 8 8 7 5 FG-GAP repeat PKD_3 PF16820.5 gi|73670249|ref|YP_306264.1| - 2.7e-06 27.0 38.3 0.14 11.9 0.1 10.8 11 0 0 11 11 11 3 PKD-like domain Lysyl_oxidase PF01186.17 gi|73670249|ref|YP_306264.1| - 4.9e-05 23.1 1.1 0.44 10.2 0.0 3.5 3 0 0 3 3 3 2 Lysyl oxidase BBS2_Mid PF14783.6 gi|73670249|ref|YP_306264.1| - 0.00067 19.7 0.0 13 5.8 0.0 4.8 4 0 0 4 4 4 1 Ciliary BBSome complex subunit 2, middle region DUF2381 PF09544.10 gi|73670249|ref|YP_306264.1| - 0.011 15.3 2.6 25 4.3 0.0 5.2 6 0 0 6 6 6 0 Protein of unknown function (DUF2381) BBS1 PF14779.6 gi|73670249|ref|YP_306264.1| - 0.049 13.1 0.1 13 5.1 0.0 3.8 4 0 0 4 4 4 0 Ciliary BBSome complex subunit 1 SoxZ PF08770.11 gi|73670249|ref|YP_306264.1| - 0.65 9.8 12.3 18 5.2 0.1 6.6 6 0 0 6 6 6 0 Sulphur oxidation protein SoxZ DUF3344 PF11824.8 gi|73670250|ref|YP_306265.1| - 2.5e-42 145.4 33.4 8e-42 143.7 33.4 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3344) DERM PF14704.6 gi|73670250|ref|YP_306265.1| - 0.088 13.3 5.8 0.091 13.2 3.6 2.0 2 0 0 2 2 2 0 Dermatopontin APOBEC_C PF05240.14 gi|73670250|ref|YP_306265.1| - 0.18 11.8 0.3 0.47 10.5 0.3 1.7 1 0 0 1 1 1 0 APOBEC-like C-terminal domain Staphylcoagulse PF04022.12 gi|73670250|ref|YP_306265.1| - 0.84 9.2 7.5 0.14 11.7 2.8 2.3 2 0 0 2 2 2 0 Staphylocoagulase repeat ABC_cobalt PF09819.9 gi|73670251|ref|YP_306266.1| - 0.42 10.8 25.4 0.19 11.9 16.1 3.1 2 1 1 3 3 3 0 ABC-type cobalt transport system, permease component DUF3344 PF11824.8 gi|73670252|ref|YP_306267.1| - 3.1e-26 92.6 0.9 3.8e-26 92.3 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) MacB_PCD PF12704.7 gi|73670253|ref|YP_306268.1| - 1.7e-15 57.9 0.0 2.9e-15 57.1 0.0 1.4 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|73670253|ref|YP_306268.1| - 1.5e-12 47.8 1.5 1.5e-12 47.8 1.5 2.9 3 0 0 3 3 3 1 FtsX-like permease family DUF2117 PF09890.9 gi|73670254|ref|YP_306269.1| - 3.9e-70 235.6 0.1 5.1e-70 235.2 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) NAD_kinase PF01513.21 gi|73670254|ref|YP_306269.1| - 0.021 14.0 0.0 0.029 13.5 0.0 1.2 1 0 0 1 1 1 0 ATP-NAD kinase MULE PF10551.9 gi|73670255|ref|YP_306270.1| - 2.7e-05 24.5 0.0 4.5e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|73670255|ref|YP_306270.1| - 0.036 13.5 0.0 0.039 13.4 0.0 1.0 1 0 0 1 1 1 0 Transposase IS66 family YdjO PF14169.6 gi|73670256|ref|YP_306271.1| - 0.0029 17.3 0.9 0.0094 15.7 0.1 1.9 2 0 0 2 2 2 1 Cold-inducible protein YdjO Zn-ribbon_8 PF09723.10 gi|73670256|ref|YP_306271.1| - 0.0058 16.7 2.3 1.1 9.4 0.7 2.3 2 0 0 2 2 2 2 Zinc ribbon domain DZR PF12773.7 gi|73670256|ref|YP_306271.1| - 0.0068 16.4 0.8 0.011 15.8 0.8 1.3 1 0 0 1 1 1 1 Double zinc ribbon TackOD1 PF18551.1 gi|73670256|ref|YP_306271.1| - 0.041 13.5 2.8 0.094 12.4 2.8 1.6 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 Zn_Tnp_IS1595 PF12760.7 gi|73670256|ref|YP_306271.1| - 0.044 13.8 2.8 0.094 12.7 2.8 1.6 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zf-ISL3 PF14690.6 gi|73670256|ref|YP_306271.1| - 0.08 13.6 3.8 6.9 7.4 0.2 2.3 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RecR PF02132.15 gi|73670256|ref|YP_306271.1| - 0.099 12.2 3.2 0.94 9.1 0.5 2.2 2 0 0 2 2 2 0 RecR protein zf-ribbon_3 PF13248.6 gi|73670256|ref|YP_306271.1| - 0.14 11.6 4.0 0.68 9.4 0.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_recom PF13408.6 gi|73670256|ref|YP_306271.1| - 0.15 12.5 3.4 0.24 12.0 3.4 1.3 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain TF_Zn_Ribbon PF08271.12 gi|73670256|ref|YP_306271.1| - 0.25 10.9 5.4 4.2 7.0 0.8 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding zf-HIT PF04438.16 gi|73670256|ref|YP_306271.1| - 0.39 10.6 5.5 1.5 8.7 1.0 2.3 2 0 0 2 2 2 0 HIT zinc finger zf_UBZ PF18439.1 gi|73670256|ref|YP_306271.1| - 1.2 8.7 5.3 12 5.6 2.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger NPCBM_assoc PF10633.9 gi|73670257|ref|YP_306272.1| - 0.0007 19.8 0.0 0.0016 18.7 0.0 1.6 1 0 0 1 1 1 1 NPCBM-associated, NEW3 domain of alpha-galactosidase FixG_C PF11614.8 gi|73670257|ref|YP_306272.1| - 0.0008 19.6 0.0 0.0066 16.7 0.0 2.4 2 1 1 3 3 3 1 IG-like fold at C-terminal of FixG, putative oxidoreductase ASH PF15780.5 gi|73670257|ref|YP_306272.1| - 0.0022 18.2 1.3 0.005 17.0 0.1 2.2 3 0 0 3 3 3 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin fn3_5 PF06280.12 gi|73670257|ref|YP_306272.1| - 0.024 15.3 5.5 0.089 13.5 0.3 3.2 1 1 0 2 2 2 0 Fn3-like domain T3RM_EcoP15I_C PF18273.1 gi|73670257|ref|YP_306272.1| - 0.061 13.6 0.2 4.3 7.7 0.6 2.6 2 1 0 2 2 2 0 Type III R-M EcoP15I C-terminal domain ApoLp-III PF07464.11 gi|73670257|ref|YP_306272.1| - 0.062 13.4 2.5 0.14 12.3 2.5 1.5 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) YojJ PF10372.9 gi|73670257|ref|YP_306272.1| - 0.079 13.1 0.2 0.35 11.0 0.0 2.1 2 1 1 3 3 3 0 Bacterial membrane-spanning protein N-terminus BORCS6 PF10157.9 gi|73670257|ref|YP_306272.1| - 0.67 10.2 4.5 1 9.5 4.5 1.2 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 Top6b_C PF18000.1 gi|73670258|ref|YP_306273.1| - 0.0019 18.3 0.0 0.0099 16.0 0.0 2.2 1 0 0 1 1 1 1 Type 2 DNA topoisomerase 6 subunit B C-terminal domain DUF11 PF01345.18 gi|73670258|ref|YP_306273.1| - 0.0026 18.0 0.0 0.0073 16.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function DUF11 DIPSY PF11763.8 gi|73670258|ref|YP_306273.1| - 0.061 13.5 0.2 20 5.4 0.1 2.7 2 0 0 2 2 2 0 Cell-wall adhesin ligand-binding C-terminal bMG10 PF17973.1 gi|73670258|ref|YP_306273.1| - 0.072 13.3 0.1 0.64 10.2 0.1 2.4 1 1 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG10 domain DUF3344 PF11824.8 gi|73670259|ref|YP_306274.1| - 7.7e-56 189.7 3.7 7.7e-56 189.7 3.7 2.2 2 1 1 3 3 3 1 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|73670259|ref|YP_306274.1| - 7.1e-22 77.6 2.2 2.5e-21 75.8 1.1 2.6 2 0 0 2 2 2 1 CARDB Phage_TTP_12 PF16461.5 gi|73670259|ref|YP_306274.1| - 0.0011 18.6 0.1 0.081 12.6 0.0 2.6 1 1 1 2 2 2 1 Lambda phage tail tube protein, TTP Big_7 PF17957.1 gi|73670259|ref|YP_306274.1| - 0.0041 17.9 6.5 0.019 15.7 0.2 3.5 3 1 0 3 3 3 1 Bacterial Ig domain Glucodextran_B PF09136.10 gi|73670259|ref|YP_306274.1| - 0.07 13.5 3.8 0.086 13.2 0.3 2.7 2 1 0 2 2 2 0 Glucodextranase, domain B DUF3344 PF11824.8 gi|73670260|ref|YP_306275.1| - 1.4e-72 244.7 16.4 1.4e-72 244.7 16.4 2.3 3 1 1 4 4 4 1 Protein of unknown function (DUF3344) PKD PF00801.20 gi|73670260|ref|YP_306275.1| - 8.2e-45 150.5 4.6 4.8e-14 52.0 0.0 3.7 3 0 0 3 3 3 3 PKD domain MG2 PF01835.19 gi|73670260|ref|YP_306275.1| - 3.2e-09 37.1 5.4 0.042 14.3 0.1 4.1 2 1 2 4 4 4 3 MG2 domain PKD_3 PF16820.5 gi|73670260|ref|YP_306275.1| - 7.8e-07 28.8 3.2 0.38 10.5 0.1 4.5 4 0 0 4 4 4 2 PKD-like domain ChitinaseA_N PF08329.10 gi|73670260|ref|YP_306275.1| - 1.9e-05 24.3 1.2 1.8 8.2 0.0 4.1 4 0 0 4 4 4 2 Chitinase A, N-terminal domain SoxZ PF08770.11 gi|73670260|ref|YP_306275.1| - 0.02 14.6 3.3 13 5.6 0.0 3.6 3 0 0 3 3 3 0 Sulphur oxidation protein SoxZ Big_4 PF07532.11 gi|73670260|ref|YP_306275.1| - 0.037 13.8 11.7 3.5 7.4 0.1 5.6 6 1 0 6 6 6 0 Bacterial Ig-like domain (group 4) Phage_Cox PF10743.9 gi|73670260|ref|YP_306275.1| - 0.23 11.6 2.3 17 5.6 0.2 3.1 3 0 0 3 3 3 0 Regulatory phage protein cox DUF4625 PF15418.6 gi|73670260|ref|YP_306275.1| - 0.24 11.7 3.8 35 4.6 0.1 3.8 4 0 0 4 4 4 0 Domain of unknown function (DUF4625) Phage_Gp19 PF09355.10 gi|73670260|ref|YP_306275.1| - 0.92 10.0 4.2 5.1 7.5 0.0 3.7 4 1 0 4 4 4 0 Phage protein Gp19/Gp15/Gp42 He_PIG PF05345.12 gi|73670260|ref|YP_306275.1| - 2.8 8.2 17.7 10 6.4 0.1 5.7 6 2 0 6 6 5 0 Putative Ig domain DUF5011 PF16403.5 gi|73670260|ref|YP_306275.1| - 3.4 7.8 26.4 3.1 8.0 0.4 4.7 4 0 0 4 4 4 0 Domain of unknown function (DUF5011) DUF3344 PF11824.8 gi|73670261|ref|YP_306276.1| - 5.3e-142 472.4 40.7 7.8e-73 245.5 17.1 3.3 4 0 0 4 4 4 2 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|73670261|ref|YP_306276.1| - 1.4e-18 67.0 4.1 1.4e-18 67.0 4.1 4.3 4 0 0 4 4 4 1 CARDB ASH PF15780.5 gi|73670261|ref|YP_306276.1| - 0.11 12.7 0.4 2.4 8.4 0.0 2.9 3 0 0 3 3 3 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin SpoIIIAH PF12685.7 gi|73670261|ref|YP_306276.1| - 7.6 6.3 26.3 3.7 7.3 10.5 2.6 2 0 0 2 2 2 0 SpoIIIAH-like protein Phosphodiest PF01663.22 gi|73670263|ref|YP_306278.1| - 1.1e-15 58.1 0.1 4.6e-14 52.8 0.1 2.1 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|73670263|ref|YP_306278.1| - 4.5e-12 46.0 0.0 1.6e-10 40.9 0.0 2.3 2 1 0 2 2 2 1 Sulfatase Metalloenzyme PF01676.18 gi|73670263|ref|YP_306278.1| - 7.5e-09 35.3 0.0 3.7e-08 33.1 0.0 1.9 1 1 0 1 1 1 1 Metalloenzyme superfamily CRAL_TRIO PF00650.20 gi|73670263|ref|YP_306278.1| - 0.14 11.9 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 CRAL/TRIO domain NT5C PF06941.12 gi|73670264|ref|YP_306279.1| - 4e-05 23.5 0.0 0.013 15.3 0.0 2.2 1 1 1 2 2 2 2 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HAD_SAK_2 PF18143.1 gi|73670264|ref|YP_306279.1| - 0.029 14.7 0.0 0.05 13.9 0.0 1.5 1 1 0 1 1 1 0 HAD domain in Swiss Army Knife RNA repair proteins MIT PF04212.18 gi|73670265|ref|YP_306280.1| - 7.5e-11 41.9 5.6 19 5.4 0.1 10.1 10 0 0 10 10 10 2 MIT (microtubule interacting and transport) domain HTH_7 PF02796.15 gi|73670265|ref|YP_306280.1| - 1.9e-09 37.5 8.4 13 6.0 0.0 10.6 12 0 0 12 12 12 2 Helix-turn-helix domain of resolvase FeoA PF04023.14 gi|73670265|ref|YP_306280.1| - 0.0059 16.8 8.4 19 5.6 0.0 7.9 9 1 1 10 10 10 1 FeoA domain DUF3606 PF12244.8 gi|73670265|ref|YP_306280.1| - 0.072 13.0 0.0 83 3.2 0.0 4.6 5 0 0 5 5 5 0 Protein of unknown function (DUF3606) TPR_1 PF00515.28 gi|73670265|ref|YP_306280.1| - 0.096 12.5 11.1 25 4.9 0.1 7.4 7 0 0 7 7 7 0 Tetratricopeptide repeat CTP_transf_3 PF02348.19 gi|73670265|ref|YP_306280.1| - 0.11 12.4 0.1 42 3.9 0.0 3.4 1 1 2 4 4 4 0 Cytidylyltransferase UBA_4 PF14555.6 gi|73670265|ref|YP_306280.1| - 8.7 6.3 22.7 46 4.0 0.0 8.3 11 0 0 11 11 11 0 UBA-like domain Sigma54_CBD PF04963.13 gi|73670266|ref|YP_306281.1| - 0.00095 19.1 0.9 0.0026 17.6 0.9 1.8 1 1 0 1 1 1 1 Sigma-54 factor, core binding domain NPV_P10 PF05531.12 gi|73670266|ref|YP_306281.1| - 0.034 14.6 5.3 4.1 8.0 0.3 3.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein SMC_Nse1 PF07574.13 gi|73670266|ref|YP_306281.1| - 0.037 13.9 6.3 0.04 13.8 4.7 1.7 1 1 1 2 2 2 0 Nse1 non-SMC component of SMC5-6 complex ER PF01133.17 gi|73670266|ref|YP_306281.1| - 0.04 14.0 2.1 0.43 10.6 0.1 2.5 1 1 0 2 2 2 0 Enhancer of rudimentary Endonuc_subdom PF09062.10 gi|73670266|ref|YP_306281.1| - 0.045 14.6 0.2 11 6.9 0.0 3.0 2 1 1 3 3 3 0 PI-PfuI Endonuclease subdomain PatG_C PF18065.1 gi|73670266|ref|YP_306281.1| - 0.089 12.8 2.1 10 6.1 0.1 2.9 2 1 0 2 2 2 0 PatG C-terminal LRR_8 PF13855.6 gi|73670266|ref|YP_306281.1| - 0.1 12.4 0.1 0.39 10.5 0.1 2.0 1 0 0 1 1 1 0 Leucine rich repeat DUF1664 PF07889.12 gi|73670266|ref|YP_306281.1| - 0.13 12.3 7.6 0.23 11.5 1.0 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Tweety PF04906.13 gi|73670266|ref|YP_306281.1| - 0.13 10.9 0.7 0.31 9.6 0.2 1.8 2 0 0 2 2 2 0 Tweety V_ATPase_I PF01496.19 gi|73670266|ref|YP_306281.1| - 0.28 9.0 6.7 0.39 8.6 6.7 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DegS PF05384.11 gi|73670266|ref|YP_306281.1| - 0.32 10.5 10.6 0.58 9.6 0.4 3.6 2 1 2 4 4 4 0 Sensor protein DegS Mit_KHE1 PF10173.9 gi|73670266|ref|YP_306281.1| - 0.95 9.5 3.7 2.2 8.4 3.7 1.8 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related FlaC_arch PF05377.11 gi|73670266|ref|YP_306281.1| - 3.4 8.1 6.9 14 6.1 0.8 3.0 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) AAA_14 PF13173.6 gi|73670267|ref|YP_306282.1| - 7.8e-34 116.5 0.1 1.8e-33 115.3 0.1 1.7 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|73670267|ref|YP_306282.1| - 2.9e-12 46.8 0.3 6.4e-12 45.7 0.3 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|73670267|ref|YP_306282.1| - 0.00029 20.8 1.1 0.00055 19.9 0.1 2.0 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|73670267|ref|YP_306282.1| - 0.001 19.5 0.0 0.0084 16.5 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain ABC_tran PF00005.27 gi|73670267|ref|YP_306282.1| - 0.031 14.8 0.0 0.065 13.7 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_22 PF13401.6 gi|73670267|ref|YP_306282.1| - 0.07 13.4 0.1 1.4 9.1 0.0 3.0 3 1 0 3 3 3 0 AAA domain AAA PF00004.29 gi|73670267|ref|YP_306282.1| - 0.11 12.9 0.0 0.22 12.0 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Yip1 PF04893.17 gi|73670268|ref|YP_306283.1| - 2.3e-15 56.7 8.5 2.9e-15 56.4 8.5 1.1 1 0 0 1 1 1 1 Yip1 domain CPP1-like PF11833.8 gi|73670268|ref|YP_306283.1| - 0.01 15.5 0.1 0.018 14.7 0.1 1.4 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DNA_topoisoIV PF00521.20 gi|73670269|ref|YP_306284.1| - 1.4e-158 528.3 0.8 2e-158 527.8 0.8 1.2 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|73670269|ref|YP_306284.1| - 5.9e-74 243.4 12.5 5.7e-14 51.3 0.2 6.5 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller Rho_RNA_bind PF07497.12 gi|73670269|ref|YP_306284.1| - 0.12 12.2 0.2 0.53 10.2 0.2 2.0 2 0 0 2 2 2 0 Rho termination factor, RNA-binding domain DNA_gyraseB PF00204.25 gi|73670270|ref|YP_306285.1| - 4.8e-62 208.5 0.7 7.7e-62 207.8 0.7 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|73670270|ref|YP_306285.1| - 2.1e-30 104.7 0.1 4.9e-30 103.5 0.1 1.7 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|73670270|ref|YP_306285.1| - 2.7e-20 72.9 0.1 8.7e-20 71.3 0.1 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|73670270|ref|YP_306285.1| - 4.4e-19 68.6 0.0 1.1e-18 67.3 0.0 1.7 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 gi|73670270|ref|YP_306285.1| - 5.6e-05 23.0 0.2 0.002 17.9 0.0 2.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RNA_pol_Rpc34 PF05158.12 gi|73670270|ref|YP_306285.1| - 0.062 12.7 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit TP6A_N PF04406.14 gi|73670271|ref|YP_306286.1| - 1.1e-13 50.9 0.2 2.8e-13 49.7 0.2 1.7 1 0 0 1 1 1 1 Type IIB DNA topoisomerase BtpA PF03437.15 gi|73670271|ref|YP_306286.1| - 0.11 11.9 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 BtpA family Topo-VIb_trans PF09239.11 gi|73670272|ref|YP_306287.1| - 3.2e-66 222.0 0.0 5.2e-66 221.4 0.0 1.3 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer Top6b_C PF18000.1 gi|73670272|ref|YP_306287.1| - 3.1e-44 149.8 0.0 6.1e-44 148.8 0.0 1.5 1 0 0 1 1 1 1 Type 2 DNA topoisomerase 6 subunit B C-terminal domain HATPase_c PF02518.26 gi|73670272|ref|YP_306287.1| - 2.1e-11 44.3 0.0 5e-11 43.1 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|73670272|ref|YP_306287.1| - 1.1e-07 31.8 0.0 2.2e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MAF_flag10 PF01973.18 gi|73670272|ref|YP_306287.1| - 0.0062 16.3 0.0 0.015 15.0 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF115 HATPase_c_5 PF14501.6 gi|73670272|ref|YP_306287.1| - 0.028 14.3 0.0 0.065 13.1 0.0 1.6 1 0 0 1 1 1 0 GHKL domain FbpA PF05833.11 gi|73670272|ref|YP_306287.1| - 0.085 11.6 0.0 0.2 10.3 0.0 1.6 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) AsnC_trans_reg PF01037.21 gi|73670273|ref|YP_306288.1| - 4.2e-11 42.6 0.2 4.8e-11 42.5 0.2 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain GYD PF08734.11 gi|73670273|ref|YP_306288.1| - 9.2e-06 25.5 0.0 1e-05 25.4 0.0 1.1 1 0 0 1 1 1 1 GYD domain NapD PF03927.13 gi|73670273|ref|YP_306288.1| - 0.0061 16.6 0.3 0.0075 16.3 0.3 1.1 1 0 0 1 1 1 1 NapD protein MIase PF02426.16 gi|73670273|ref|YP_306288.1| - 0.021 15.0 0.0 0.025 14.7 0.0 1.1 1 0 0 1 1 1 0 Muconolactone delta-isomerase MgtE PF01769.16 gi|73670274|ref|YP_306289.1| - 2.4e-20 73.2 9.1 2.4e-20 73.2 9.1 1.5 2 0 0 2 2 2 1 Divalent cation transporter DUF4118 PF13493.6 gi|73670274|ref|YP_306289.1| - 0.44 10.4 17.3 0.13 12.1 13.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4118) MgtE PF01769.16 gi|73670275|ref|YP_306290.1| - 1e-18 67.9 10.2 1e-18 67.9 10.2 1.8 2 0 0 2 2 2 1 Divalent cation transporter TrkA_C PF02080.21 gi|73670276|ref|YP_306291.1| - 1.3e-26 92.2 0.1 1.3e-12 47.3 0.0 2.4 2 0 0 2 2 2 2 TrkA-C domain PhoU PF01895.19 gi|73670276|ref|YP_306291.1| - 4.9e-20 71.8 12.9 2.3e-11 44.0 4.7 2.6 2 0 0 2 2 2 2 PhoU domain Imm17 PF15562.6 gi|73670276|ref|YP_306291.1| - 0.18 11.7 0.0 1.1 9.2 0.0 2.0 2 0 0 2 2 2 0 Immunity protein 17 DUF362 PF04015.12 gi|73670277|ref|YP_306292.1| - 0.17 12.1 0.1 0.19 11.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF362) YhfH PF14149.6 gi|73670278|ref|YP_306293.1| - 0.03 14.3 1.2 0.03 14.3 1.2 2.2 1 1 1 2 2 2 0 YhfH-like protein PolC_DP2 PF03833.13 gi|73670278|ref|YP_306293.1| - 0.042 11.7 0.3 0.041 11.8 0.3 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zinc_ribbon_2 PF13240.6 gi|73670278|ref|YP_306293.1| - 0.06 13.1 6.9 0.91 9.3 7.0 2.1 1 1 1 2 2 2 0 zinc-ribbon domain DUF5044 PF16447.5 gi|73670278|ref|YP_306293.1| - 0.13 12.1 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5044) zf-ACC PF17848.1 gi|73670278|ref|YP_306293.1| - 0.16 12.1 5.7 2.8 8.1 0.8 2.3 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Zn-ribbon_8 PF09723.10 gi|73670278|ref|YP_306293.1| - 0.25 11.5 4.6 6 7.1 0.2 2.5 1 1 1 2 2 2 0 Zinc ribbon domain NRDD PF13597.6 gi|73670278|ref|YP_306293.1| - 0.43 9.3 2.9 0.52 9.0 2.9 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase Nudix_N_2 PF14803.6 gi|73670278|ref|YP_306293.1| - 1.9 8.5 7.7 0.82 9.6 0.9 2.7 3 1 0 3 3 3 0 Nudix N-terminal PBP PF01161.20 gi|73670279|ref|YP_306294.1| - 8.5e-35 119.9 0.0 1.1e-34 119.6 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein PsbX PF06596.11 gi|73670279|ref|YP_306294.1| - 1.1 9.4 3.1 1.8 8.6 3.1 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre X protein (PsbX) PMSR PF01625.21 gi|73670280|ref|YP_306295.1| - 1.9e-65 219.7 0.7 2.4e-65 219.4 0.7 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase DMP12 PF16779.5 gi|73670280|ref|YP_306295.1| - 0.086 12.8 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 DNA-mimic protein Oxidored_FMN PF00724.20 gi|73670283|ref|YP_306298.1| - 6.4e-71 239.4 0.0 7.6e-71 239.1 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Dus PF01207.17 gi|73670283|ref|YP_306298.1| - 3.8e-05 22.9 0.0 5.8e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|73670283|ref|YP_306298.1| - 0.00017 21.1 0.3 0.00042 19.9 0.0 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein NMO PF03060.15 gi|73670283|ref|YP_306298.1| - 0.014 14.8 0.1 0.022 14.1 0.1 1.3 1 0 0 1 1 1 0 Nitronate monooxygenase HMGL-like PF00682.19 gi|73670283|ref|YP_306298.1| - 0.073 12.6 0.2 0.24 10.9 0.1 1.9 1 1 1 2 2 2 0 HMGL-like DUF561 PF04481.12 gi|73670283|ref|YP_306298.1| - 0.11 11.7 0.1 0.2 10.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Cupin_2 PF07883.11 gi|73670284|ref|YP_306299.1| - 6.9e-16 57.7 0.2 1e-15 57.1 0.2 1.2 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.22 gi|73670284|ref|YP_306299.1| - 4.2e-11 42.7 0.6 6.2e-11 42.2 0.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|73670284|ref|YP_306299.1| - 8.6e-11 42.0 0.7 1.4e-10 41.3 0.7 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|73670284|ref|YP_306299.1| - 4.1e-07 29.9 0.1 7e-07 29.2 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|73670284|ref|YP_306299.1| - 4.3e-07 30.3 0.1 6.6e-07 29.7 0.1 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain AraC_binding PF02311.19 gi|73670284|ref|YP_306299.1| - 0.00015 21.6 1.2 0.00019 21.4 0.2 1.5 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|73670284|ref|YP_306299.1| - 0.00035 20.2 0.0 0.00059 19.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) HTH_25 PF13413.6 gi|73670284|ref|YP_306299.1| - 0.0018 18.1 3.1 0.0036 17.1 3.1 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain GHMP_kinases_C PF08544.13 gi|73670284|ref|YP_306299.1| - 0.071 13.5 0.0 0.14 12.6 0.0 1.6 1 0 0 1 1 1 0 GHMP kinases C terminal MannoseP_isomer PF01050.18 gi|73670284|ref|YP_306299.1| - 0.073 13.0 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Sigma70_r4 PF04545.16 gi|73670284|ref|YP_306299.1| - 0.17 11.4 1.4 0.3 10.6 0.9 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 4HBT PF03061.22 gi|73670285|ref|YP_306300.1| - 6.5e-09 36.0 0.0 1e-08 35.4 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|73670285|ref|YP_306300.1| - 4.8e-08 33.5 0.0 6.3e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|73670285|ref|YP_306300.1| - 0.00098 18.5 0.0 0.077 12.3 0.0 2.0 2 0 0 2 2 2 2 Acyl-ACP thioesterase LSPR PF06049.12 gi|73670285|ref|YP_306300.1| - 0.45 10.5 1.9 38 4.7 0.0 2.9 2 0 0 2 2 2 0 Coagulation Factor V LSPD Repeat AMP-binding PF00501.28 gi|73670286|ref|YP_306301.1| - 2.2e-111 372.4 0.1 2.7e-111 372.2 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|73670286|ref|YP_306301.1| - 6.7e-18 65.5 0.1 1.5e-17 64.3 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain CbiQ PF02361.16 gi|73670287|ref|YP_306302.1| - 1.3e-31 110.0 9.2 1.6e-31 109.6 9.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.27 gi|73670288|ref|YP_306303.1| - 6.3e-55 185.4 1.0 4.9e-27 95.1 0.0 2.6 3 0 0 3 3 2 2 ABC transporter SMC_N PF02463.19 gi|73670288|ref|YP_306303.1| - 1e-19 70.9 4.5 1.5e-09 37.6 0.5 2.4 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73670288|ref|YP_306303.1| - 9e-18 65.1 6.8 3e-06 27.3 0.0 4.2 2 2 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|73670288|ref|YP_306303.1| - 1.2e-08 35.5 3.3 0.0051 17.2 0.1 3.3 2 2 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|73670288|ref|YP_306303.1| - 4.9e-08 33.7 0.4 0.0077 16.7 0.2 2.5 2 1 0 2 2 2 2 AAA domain SbcCD_C PF13558.6 gi|73670288|ref|YP_306303.1| - 1.1e-07 32.0 1.8 0.045 14.0 0.5 3.9 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit IstB_IS21 PF01695.17 gi|73670288|ref|YP_306303.1| - 2.8e-07 30.5 1.1 1.1 8.9 0.0 4.1 4 0 0 4 4 4 2 IstB-like ATP binding protein AAA_22 PF13401.6 gi|73670288|ref|YP_306303.1| - 5.3e-07 30.0 6.2 0.02 15.1 1.1 3.6 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|73670288|ref|YP_306303.1| - 9.4e-07 28.5 0.1 0.042 13.6 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|73670288|ref|YP_306303.1| - 3.8e-06 26.6 0.7 0.018 14.6 0.0 3.8 3 1 0 3 3 3 1 AAA domain ABC_ATPase PF09818.9 gi|73670288|ref|YP_306303.1| - 2e-05 23.6 7.3 0.27 10.0 0.0 3.9 4 0 0 4 4 4 3 Predicted ATPase of the ABC class ATPase PF06745.13 gi|73670288|ref|YP_306303.1| - 2e-05 24.0 7.3 0.29 10.5 0.0 4.2 4 1 0 4 4 4 2 KaiC AAA_30 PF13604.6 gi|73670288|ref|YP_306303.1| - 2.8e-05 23.9 3.4 0.012 15.3 0.0 3.2 2 2 0 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|73670288|ref|YP_306303.1| - 0.00013 21.7 5.6 0.37 10.5 0.0 4.3 4 1 0 4 4 4 1 AAA domain RNA_helicase PF00910.22 gi|73670288|ref|YP_306303.1| - 0.00014 22.2 0.1 0.14 12.5 0.0 2.7 2 0 0 2 2 2 1 RNA helicase TniB PF05621.11 gi|73670288|ref|YP_306303.1| - 0.00016 21.2 3.8 4.6 6.6 0.1 4.1 4 0 0 4 4 4 0 Bacterial TniB protein Zot PF05707.12 gi|73670288|ref|YP_306303.1| - 0.00022 20.9 1.8 0.1 12.2 0.1 3.3 3 1 1 4 4 4 1 Zonular occludens toxin (Zot) PRK PF00485.18 gi|73670288|ref|YP_306303.1| - 0.00025 20.8 0.5 0.73 9.5 0.0 3.3 3 0 0 3 3 3 1 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 gi|73670288|ref|YP_306303.1| - 0.00056 19.9 0.1 0.018 14.9 0.0 2.6 2 0 0 2 2 2 1 NACHT domain AAA_15 PF13175.6 gi|73670288|ref|YP_306303.1| - 0.00057 19.7 3.1 0.17 11.6 0.1 3.2 2 2 1 3 3 3 1 AAA ATPase domain TsaE PF02367.17 gi|73670288|ref|YP_306303.1| - 0.00095 19.2 0.3 0.58 10.2 0.0 2.5 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 gi|73670288|ref|YP_306303.1| - 0.0014 19.0 9.7 0.62 10.5 1.7 4.3 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DLIC PF05783.11 gi|73670288|ref|YP_306303.1| - 0.0019 17.1 0.2 0.15 10.8 0.0 2.3 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) AAA_13 PF13166.6 gi|73670288|ref|YP_306303.1| - 0.0021 16.8 4.5 1.1 7.9 0.4 3.6 3 1 1 4 4 4 2 AAA domain AAA_27 PF13514.6 gi|73670288|ref|YP_306303.1| - 0.0023 17.6 0.4 1.9 8.0 0.1 2.8 3 0 0 3 3 3 1 AAA domain ATPase_2 PF01637.18 gi|73670288|ref|YP_306303.1| - 0.0029 17.5 4.8 0.81 9.6 0.1 3.4 2 2 0 2 2 2 1 ATPase domain predominantly from Archaea G-alpha PF00503.20 gi|73670288|ref|YP_306303.1| - 0.003 16.8 0.3 0.69 9.0 0.0 2.4 2 1 0 2 2 2 1 G-protein alpha subunit RsgA_GTPase PF03193.16 gi|73670288|ref|YP_306303.1| - 0.0033 17.3 0.6 1.9 8.4 0.0 2.7 3 0 0 3 3 2 1 RsgA GTPase Mg_chelatase PF01078.21 gi|73670288|ref|YP_306303.1| - 0.0038 16.6 0.8 1.4 8.3 0.0 3.0 2 1 0 3 3 3 1 Magnesium chelatase, subunit ChlI DnaB_C PF03796.15 gi|73670288|ref|YP_306303.1| - 0.0042 16.4 2.5 0.27 10.6 0.0 3.7 4 0 0 4 4 4 1 DnaB-like helicase C terminal domain ATP_bind_1 PF03029.17 gi|73670288|ref|YP_306303.1| - 0.0044 16.8 1.8 3.3 7.4 0.1 4.0 4 0 0 4 4 4 1 Conserved hypothetical ATP binding protein AAA_33 PF13671.6 gi|73670288|ref|YP_306303.1| - 0.0046 17.1 4.3 2 8.6 0.3 3.4 3 0 0 3 3 3 1 AAA domain Roc PF08477.13 gi|73670288|ref|YP_306303.1| - 0.0058 16.8 0.4 1 9.6 0.1 3.1 3 0 0 3 3 3 1 Ras of Complex, Roc, domain of DAPkinase Zeta_toxin PF06414.12 gi|73670288|ref|YP_306303.1| - 0.0075 15.6 0.3 4.4 6.5 0.0 2.7 3 0 0 3 3 2 0 Zeta toxin AAA_18 PF13238.6 gi|73670288|ref|YP_306303.1| - 0.01 16.4 1.9 12 6.4 0.0 3.8 4 0 0 4 4 4 0 AAA domain NTPase_1 PF03266.15 gi|73670288|ref|YP_306303.1| - 0.011 15.7 11.0 0.23 11.4 0.1 3.7 2 2 1 3 3 3 0 NTPase PhoH PF02562.16 gi|73670288|ref|YP_306303.1| - 0.011 15.2 2.5 3.5 7.0 0.0 3.6 4 0 0 4 4 4 0 PhoH-like protein PduV-EutP PF10662.9 gi|73670288|ref|YP_306303.1| - 0.015 15.1 0.2 2.1 8.1 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation T2SSE PF00437.20 gi|73670288|ref|YP_306303.1| - 0.017 14.2 1.2 0.3 10.1 0.1 2.7 3 0 0 3 3 3 0 Type II/IV secretion system protein AAA_14 PF13173.6 gi|73670288|ref|YP_306303.1| - 0.021 14.9 0.2 23 5.0 0.0 3.5 3 0 0 3 3 3 0 AAA domain DUF87 PF01935.17 gi|73670288|ref|YP_306303.1| - 0.029 14.5 0.4 1.1 9.4 0.0 2.7 3 0 0 3 3 2 0 Helicase HerA, central domain APS_kinase PF01583.20 gi|73670288|ref|YP_306303.1| - 0.074 12.9 2.4 0.25 11.2 0.1 2.7 3 0 0 3 3 2 0 Adenylylsulphate kinase MobB PF03205.14 gi|73670288|ref|YP_306303.1| - 0.077 12.9 4.7 6 6.8 0.1 3.7 4 0 0 4 4 3 0 Molybdopterin guanine dinucleotide synthesis protein B TrkA_N PF02254.18 gi|73670288|ref|YP_306303.1| - 0.083 13.2 0.4 9.6 6.5 0.1 2.5 2 0 0 2 2 2 0 TrkA-N domain AAA_28 PF13521.6 gi|73670288|ref|YP_306303.1| - 0.093 13.0 0.8 6.8 6.9 0.0 3.0 3 0 0 3 3 2 0 AAA domain Rad17 PF03215.15 gi|73670288|ref|YP_306303.1| - 0.13 12.2 0.1 4.7 7.1 0.0 2.8 3 0 0 3 3 3 0 Rad17 P-loop domain KTI12 PF08433.10 gi|73670288|ref|YP_306303.1| - 0.16 11.4 0.1 13 5.1 0.0 2.5 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_5 PF07728.14 gi|73670288|ref|YP_306303.1| - 0.17 11.9 0.7 1 9.3 0.0 2.6 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) MMR_HSR1 PF01926.23 gi|73670288|ref|YP_306303.1| - 0.31 11.1 1.7 26 4.9 0.6 3.0 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_19 PF13245.6 gi|73670288|ref|YP_306303.1| - 0.5 10.7 7.3 4.3 7.6 1.2 3.4 2 2 0 2 2 2 0 AAA domain CbiA PF01656.23 gi|73670288|ref|YP_306303.1| - 2.5 8.2 4.5 5.7 7.0 0.3 3.1 3 1 0 3 3 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain EIIBC-GUT_C PF07663.11 gi|73670289|ref|YP_306304.1| - 0.0051 16.9 1.1 0.0062 16.7 1.1 1.1 1 0 0 1 1 1 1 Sorbitol phosphotransferase enzyme II C-terminus TrpP PF17099.5 gi|73670290|ref|YP_306305.1| - 2e-05 24.5 6.0 2.1e-05 24.3 6.0 1.0 1 0 0 1 1 1 1 Tryptophan transporter TrpP DUF1804 PF08822.11 gi|73670291|ref|YP_306306.1| - 0.034 14.1 0.5 0.27 11.2 0.0 2.6 2 1 0 3 3 3 0 Protein of unknown function (DUF1804) DUF4277 PF14104.6 gi|73670292|ref|YP_306307.1| - 3.2e-33 114.4 0.0 6.4e-33 113.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|73670292|ref|YP_306307.1| - 2.4e-06 27.4 0.8 1.9e-05 24.5 0.8 2.1 1 1 0 1 1 1 1 Transposase DDE domain FAD_binding_9 PF08021.11 gi|73670293|ref|YP_306308.1| - 0.1 12.8 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain LapA_dom PF06305.11 gi|73670293|ref|YP_306308.1| - 0.16 11.8 0.8 0.32 10.8 0.8 1.5 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain NUDIX PF00293.28 gi|73670294|ref|YP_306309.1| - 1.5e-20 73.6 0.0 2.6e-20 72.8 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain zf-NADH-PPase PF09297.11 gi|73670294|ref|YP_306309.1| - 9.9e-12 44.3 2.8 9.9e-12 44.3 2.8 1.7 2 0 0 2 2 2 1 NADH pyrophosphatase zinc ribbon domain NUDIX-like PF09296.11 gi|73670294|ref|YP_306309.1| - 5.4e-10 39.8 0.0 9.3e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase-like rudimentary NUDIX domain OrfB_Zn_ribbon PF07282.11 gi|73670294|ref|YP_306309.1| - 0.0011 18.9 2.8 0.0013 18.6 0.9 2.1 2 0 0 2 2 2 1 Putative transposase DNA-binding domain DZR PF12773.7 gi|73670294|ref|YP_306309.1| - 0.0024 17.9 3.9 0.0034 17.4 1.2 2.2 2 0 0 2 2 2 1 Double zinc ribbon NOB1_Zn_bind PF08772.11 gi|73670294|ref|YP_306309.1| - 0.0042 17.2 0.3 0.035 14.3 0.2 2.2 2 0 0 2 2 2 1 Nin one binding (NOB1) Zn-ribbon like HypA PF01155.19 gi|73670294|ref|YP_306309.1| - 0.023 14.7 0.4 0.053 13.6 0.4 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NUDIX_4 PF14815.6 gi|73670294|ref|YP_306309.1| - 0.04 13.9 0.0 0.15 12.1 0.0 1.9 2 0 0 2 2 2 0 NUDIX domain zf-ribbon_3 PF13248.6 gi|73670294|ref|YP_306309.1| - 0.041 13.3 8.8 3.1 7.4 0.2 3.3 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|73670294|ref|YP_306309.1| - 0.42 10.4 8.3 1.6 8.6 0.1 3.3 3 0 0 3 3 3 0 zinc-ribbon domain DUF35_N PF12172.8 gi|73670294|ref|YP_306309.1| - 0.48 10.4 8.9 1.2 9.1 0.1 3.6 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Auto_anti-p27 PF06677.12 gi|73670294|ref|YP_306309.1| - 1.2 9.3 4.8 0.45 10.7 1.0 2.1 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Zn-ribbon_8 PF09723.10 gi|73670294|ref|YP_306309.1| - 1.2 9.3 9.0 9.2 6.5 3.9 3.1 2 1 1 3 3 3 0 Zinc ribbon domain GrpB PF04229.14 gi|73670296|ref|YP_306311.1| - 8.3e-46 156.1 0.1 9.5e-46 155.9 0.1 1.0 1 0 0 1 1 1 1 GrpB protein YdjM PF04307.14 gi|73670297|ref|YP_306312.1| - 5.4e-15 55.1 3.5 6.7e-15 54.8 3.5 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Zn_dep_PLPC PF00882.18 gi|73670297|ref|YP_306312.1| - 0.0024 17.9 0.1 0.003 17.6 0.1 1.2 1 0 0 1 1 1 1 Zinc dependent phospholipase C Peptidase_M13_N PF05649.13 gi|73670299|ref|YP_306314.1| - 1.3e-101 341.1 1.0 1.9e-101 340.5 1.0 1.3 1 0 0 1 1 1 1 Peptidase family M13 Peptidase_M13 PF01431.21 gi|73670299|ref|YP_306314.1| - 3.7e-64 216.1 0.1 1e-63 214.7 0.0 1.7 2 0 0 2 2 2 1 Peptidase family M13 HigB-like_toxin PF05015.13 gi|73670299|ref|YP_306314.1| - 0.057 13.8 0.6 0.23 11.9 0.1 2.2 2 0 0 2 2 2 0 RelE-like toxin of type II toxin-antitoxin system HigB Peptidase_M48 PF01435.18 gi|73670299|ref|YP_306314.1| - 0.13 12.0 0.0 0.32 10.7 0.0 1.6 1 0 0 1 1 1 0 Peptidase family M48 SBF PF01758.16 gi|73670300|ref|YP_306315.1| - 8.3e-42 143.1 23.8 1.5e-41 142.2 23.8 1.4 1 0 0 1 1 1 1 Sodium Bile acid symporter family SBF_like PF13593.6 gi|73670300|ref|YP_306315.1| - 1.3e-18 67.4 26.1 1.5e-18 67.2 26.1 1.1 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) Mem_trans PF03547.18 gi|73670300|ref|YP_306315.1| - 2.4 6.5 19.8 0.057 11.8 8.9 2.7 1 1 2 3 3 3 0 Membrane transport protein HTH_OrfB_IS605 PF12323.8 gi|73670301|ref|YP_306316.1| - 5.1e-21 73.9 2.6 6.8e-21 73.5 2.6 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain PfkB PF00294.24 gi|73670303|ref|YP_306318.1| - 1.6e-39 136.0 0.0 4e-39 134.7 0.0 1.5 1 1 1 2 2 2 1 pfkB family carbohydrate kinase ssDBP PF17878.1 gi|73670303|ref|YP_306318.1| - 0.6 10.4 4.2 0.3 11.4 0.4 2.2 2 1 1 3 3 3 0 Single-stranded DNA-binding protein Peptidase_M48 PF01435.18 gi|73670305|ref|YP_306320.1| - 1e-39 136.4 0.0 1.4e-39 135.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|73670305|ref|YP_306320.1| - 2.2e-07 30.4 0.4 1.3e-06 27.8 0.0 2.0 2 0 0 2 2 2 1 BlaR1 peptidase M56 DUF4157 PF13699.6 gi|73670305|ref|YP_306320.1| - 0.026 14.7 0.1 0.051 13.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) VKOR PF07884.14 gi|73670305|ref|YP_306320.1| - 0.81 9.9 5.6 0.68 10.1 0.8 2.2 2 0 0 2 2 2 0 Vitamin K epoxide reductase family ABC2_membrane_5 PF13346.6 gi|73670305|ref|YP_306320.1| - 2.6 7.5 11.4 0.077 12.5 2.0 2.4 2 1 0 2 2 2 0 ABC-2 family transporter protein DUF3953 PF13129.6 gi|73670305|ref|YP_306320.1| - 4.3 7.2 8.7 1.2 9.0 0.3 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3953) RIO1 PF01163.22 gi|73670306|ref|YP_306321.1| - 1.3e-43 148.8 1.1 1.4e-43 148.7 0.0 1.5 2 0 0 2 2 2 1 RIO1 family Rio2_N PF09202.11 gi|73670306|ref|YP_306321.1| - 6.3e-29 100.0 0.0 1.3e-28 99.0 0.0 1.5 1 0 0 1 1 1 1 Rio2, N-terminal Pkinase PF00069.25 gi|73670306|ref|YP_306321.1| - 0.0008 18.8 0.0 0.0015 18.0 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|73670306|ref|YP_306321.1| - 0.0021 18.0 0.0 0.0054 16.7 0.0 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Merozoite_SPAM PF07133.11 gi|73670306|ref|YP_306321.1| - 1.1 9.2 24.6 1.6 8.7 24.6 1.2 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) DUF2207 PF09972.9 gi|73670307|ref|YP_306322.1| - 1.6e-83 281.1 4.3 3.9e-83 279.9 4.3 1.6 1 1 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF515 PF04415.12 gi|73670307|ref|YP_306322.1| - 0.49 8.7 6.6 0.98 7.7 6.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF515) DEAD PF00270.29 gi|73670308|ref|YP_306323.1| - 2.2e-25 89.4 0.0 4.3e-25 88.5 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF1998 PF09369.10 gi|73670308|ref|YP_306323.1| - 2e-22 79.8 0.0 2.1e-21 76.5 0.0 2.6 2 0 0 2 2 2 1 Domain of unknown function (DUF1998) Helicase_C PF00271.31 gi|73670308|ref|YP_306323.1| - 1.8e-13 50.8 0.0 1.1e-12 48.2 0.0 2.3 2 1 1 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|73670308|ref|YP_306323.1| - 2.5e-06 27.6 0.0 5.7e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit MC1 PF05854.11 gi|73670308|ref|YP_306323.1| - 0.018 15.3 0.5 0.037 14.3 0.5 1.5 1 0 0 1 1 1 0 Non-histone chromosomal protein MC1 NupH_GANP PF16768.5 gi|73670308|ref|YP_306323.1| - 0.037 13.7 0.4 0.062 13.0 0.4 1.3 1 0 0 1 1 1 0 Nucleoporin homology of Germinal-centre associated nuclear protein NosD PF05048.13 gi|73670309|ref|YP_306324.1| - 9.1e-45 152.8 70.4 8.8e-41 139.7 26.2 4.8 3 2 1 4 4 4 2 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|73670309|ref|YP_306324.1| - 1.5e-27 95.2 13.0 2.1e-11 43.5 0.4 3.4 3 0 0 3 3 3 3 PKD domain PKD_3 PF16820.5 gi|73670309|ref|YP_306324.1| - 0.0002 21.0 2.1 0.13 12.0 0.1 3.6 3 0 0 3 3 3 1 PKD-like domain APS-reductase_C PF12139.8 gi|73670309|ref|YP_306324.1| - 0.046 13.9 0.4 12 6.2 0.0 3.5 2 1 1 3 3 3 0 Adenosine-5'-phosphosulfate reductase beta subunit Y_Y_Y PF07495.13 gi|73670309|ref|YP_306324.1| - 0.077 13.0 7.5 5.3 7.1 0.2 4.4 4 0 0 4 4 4 0 Y_Y_Y domain DUF928 PF06051.12 gi|73670309|ref|YP_306324.1| - 0.51 10.2 4.8 3.3 7.5 0.5 3.0 2 1 1 3 3 3 0 Domain of Unknown Function (DUF928) NosD PF05048.13 gi|73670310|ref|YP_306325.1| - 2.6e-50 170.9 53.3 7.2e-50 169.5 32.5 4.2 3 2 1 4 4 4 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670310|ref|YP_306325.1| - 3.8e-18 65.8 107.6 2.1e-11 43.9 29.6 6.0 2 2 5 7 7 7 4 Right handed beta helix region PKD PF00801.20 gi|73670310|ref|YP_306325.1| - 3.5e-16 58.8 7.5 5.1e-09 35.9 0.4 2.9 3 0 0 3 3 3 2 PKD domain DUF4837 PF16125.5 gi|73670310|ref|YP_306325.1| - 0.14 11.2 0.8 0.87 8.6 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4837) Pyr_redox_2 PF07992.14 gi|73670311|ref|YP_306326.1| - 1.1e-16 60.9 0.0 4.2e-05 22.9 0.0 3.2 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|73670311|ref|YP_306326.1| - 4.9e-14 52.2 0.1 4.9e-05 22.6 0.0 3.1 3 0 0 3 3 3 3 FAD binding domain GIDA PF01134.22 gi|73670311|ref|YP_306326.1| - 1.3e-11 44.3 0.0 0.00072 18.7 0.0 3.1 3 0 0 3 3 3 3 Glucose inhibited division protein A HI0933_like PF03486.14 gi|73670311|ref|YP_306326.1| - 9.5e-08 31.2 0.0 0.00011 21.0 0.0 2.2 2 0 0 2 2 2 2 HI0933-like protein DAO PF01266.24 gi|73670311|ref|YP_306326.1| - 2.8e-07 30.4 0.0 0.00023 20.9 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|73670311|ref|YP_306326.1| - 1.4e-05 24.5 0.0 8e-05 22.0 0.0 2.0 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 gi|73670311|ref|YP_306326.1| - 6.8e-05 23.0 0.0 0.00025 21.2 0.0 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|73670311|ref|YP_306326.1| - 0.00024 20.3 0.0 0.012 14.7 0.0 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 gi|73670311|ref|YP_306326.1| - 0.00032 20.1 0.0 0.0014 18.0 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|73670311|ref|YP_306326.1| - 0.00052 19.4 0.0 0.0021 17.4 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.27 gi|73670311|ref|YP_306326.1| - 0.008 16.7 0.0 6.1 7.5 0.0 3.2 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|73670311|ref|YP_306326.1| - 0.024 14.0 0.1 0.54 9.5 0.1 2.1 2 0 0 2 2 2 0 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|73670311|ref|YP_306326.1| - 0.04 13.9 0.0 0.4 10.7 0.0 2.2 2 0 0 2 2 2 0 FAD-NAD(P)-binding ABC_tran PF00005.27 gi|73670312|ref|YP_306327.1| - 9.1e-32 110.4 0.0 1.2e-31 110.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|73670312|ref|YP_306327.1| - 8.8e-10 38.4 0.1 0.00035 20.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73670312|ref|YP_306327.1| - 1.1e-05 25.5 0.1 0.038 13.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|73670312|ref|YP_306327.1| - 1.4e-05 24.7 0.1 3.1e-05 23.6 0.1 1.6 1 1 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|73670312|ref|YP_306327.1| - 5.1e-05 23.1 0.0 0.00055 19.8 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|73670312|ref|YP_306327.1| - 8.3e-05 22.9 0.2 0.00087 19.6 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.7 gi|73670312|ref|YP_306327.1| - 0.00017 20.6 0.0 0.035 13.0 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain AAA_16 PF13191.6 gi|73670312|ref|YP_306327.1| - 0.00017 22.0 0.0 0.00033 21.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|73670312|ref|YP_306327.1| - 0.001 19.6 0.1 0.0021 18.6 0.0 1.6 2 0 0 2 2 1 1 AAA domain AAA_25 PF13481.6 gi|73670312|ref|YP_306327.1| - 0.0084 15.7 0.0 0.3 10.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|73670312|ref|YP_306327.1| - 0.0091 15.9 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase IstB_IS21 PF01695.17 gi|73670312|ref|YP_306327.1| - 0.0094 15.7 0.0 0.078 12.7 0.0 2.0 2 0 0 2 2 2 1 IstB-like ATP binding protein NB-ARC PF00931.22 gi|73670312|ref|YP_306327.1| - 0.017 14.3 0.0 0.041 13.1 0.0 1.6 1 0 0 1 1 1 0 NB-ARC domain AAA_30 PF13604.6 gi|73670312|ref|YP_306327.1| - 0.033 13.9 0.0 0.068 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 gi|73670312|ref|YP_306327.1| - 0.039 13.1 0.0 0.039 13.1 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit NACHT PF05729.12 gi|73670312|ref|YP_306327.1| - 0.047 13.6 0.1 0.12 12.2 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Rad17 PF03215.15 gi|73670312|ref|YP_306327.1| - 0.055 13.4 0.0 0.094 12.6 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_33 PF13671.6 gi|73670312|ref|YP_306327.1| - 0.082 13.1 0.9 0.28 11.3 0.4 2.0 2 1 1 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 gi|73670312|ref|YP_306327.1| - 0.1 12.7 0.5 0.31 11.2 0.1 1.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase RNA_helicase PF00910.22 gi|73670312|ref|YP_306327.1| - 0.1 13.0 0.1 0.29 11.5 0.0 1.9 3 0 0 3 3 1 0 RNA helicase AAA_24 PF13479.6 gi|73670312|ref|YP_306327.1| - 0.11 12.2 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|73670312|ref|YP_306327.1| - 0.14 11.6 0.0 0.28 10.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region Cytidylate_kin PF02224.18 gi|73670312|ref|YP_306327.1| - 0.15 11.8 0.1 0.32 10.7 0.1 1.6 1 0 0 1 1 1 0 Cytidylate kinase AAA_28 PF13521.6 gi|73670312|ref|YP_306327.1| - 0.18 12.0 0.0 0.98 9.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain DUF296 PF03479.15 gi|73670313|ref|YP_306328.1| - 2e-13 50.6 0.0 2.3e-13 50.4 0.0 1.1 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain TrmB PF01978.19 gi|73670314|ref|YP_306329.1| - 0.00094 19.0 0.0 0.0017 18.2 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB SMC_ScpB PF04079.16 gi|73670314|ref|YP_306329.1| - 0.0018 17.9 0.0 0.0023 17.6 0.0 1.3 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB PadR PF03551.14 gi|73670314|ref|YP_306329.1| - 0.0038 17.1 0.1 0.0096 15.9 0.1 1.7 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family MarR_2 PF12802.7 gi|73670314|ref|YP_306329.1| - 0.044 13.7 0.1 0.1 12.5 0.0 1.7 2 0 0 2 2 2 0 MarR family Enolase_C PF00113.22 gi|73670315|ref|YP_306330.1| - 4.6e-119 397.0 1.5 6.2e-119 396.6 1.5 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|73670315|ref|YP_306330.1| - 2.9e-61 205.4 0.0 5.7e-61 204.5 0.0 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|73670315|ref|YP_306330.1| - 3.6e-06 26.7 0.0 5.6e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|73670315|ref|YP_306330.1| - 0.0021 17.2 0.1 0.0035 16.5 0.1 1.4 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus Usp PF00582.26 gi|73670316|ref|YP_306331.1| - 3.6e-34 118.3 0.1 6.1e-34 117.6 0.1 1.3 1 1 0 1 1 1 1 Universal stress protein family PKD PF00801.20 gi|73670317|ref|YP_306332.1| - 1.2e-08 34.7 4.2 1.7e-08 34.1 4.2 1.2 1 0 0 1 1 1 1 PKD domain PKD PF00801.20 gi|73670318|ref|YP_306333.1| - 9.2e-40 134.3 14.1 4.2e-13 48.9 0.8 3.5 3 0 0 3 3 3 3 PKD domain NosD PF05048.13 gi|73670318|ref|YP_306333.1| - 4.9e-38 130.8 20.1 8e-38 130.1 20.1 1.4 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) MG2 PF01835.19 gi|73670318|ref|YP_306333.1| - 3e-06 27.6 6.5 0.49 10.9 0.1 4.1 2 1 2 4 4 4 3 MG2 domain Big_4 PF07532.11 gi|73670318|ref|YP_306333.1| - 0.0016 18.2 11.0 2.6 7.9 0.1 4.7 4 0 0 4 4 4 3 Bacterial Ig-like domain (group 4) DUF3324 PF11797.8 gi|73670318|ref|YP_306333.1| - 0.0049 16.8 9.0 3.2 7.7 0.3 4.0 4 0 0 4 4 4 3 Protein of unknown function C-terminal (DUF3324) Phage_Gp19 PF09355.10 gi|73670318|ref|YP_306333.1| - 0.009 16.4 1.5 31 5.0 0.0 3.8 4 0 0 4 4 4 0 Phage protein Gp19/Gp15/Gp42 PKD_3 PF16820.5 gi|73670318|ref|YP_306333.1| - 0.061 13.1 2.2 29 4.5 0.0 3.4 3 0 0 3 3 3 0 PKD-like domain DUF5011 PF16403.5 gi|73670318|ref|YP_306333.1| - 0.13 12.4 20.6 3.3 7.9 1.5 3.8 3 0 0 3 3 3 0 Domain of unknown function (DUF5011) DUF2381 PF09544.10 gi|73670318|ref|YP_306333.1| - 0.18 11.3 0.3 2.6 7.5 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2381) RNHCP PF12647.7 gi|73670320|ref|YP_306335.1| - 0.067 13.2 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 RNHCP domain DUF4867 PF16161.5 gi|73670320|ref|YP_306335.1| - 0.13 11.8 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4867) PPK2 PF03976.14 gi|73670321|ref|YP_306336.1| - 1.7e-138 459.5 12.5 8.8e-88 293.7 5.9 2.0 2 0 0 2 2 2 2 Polyphosphate kinase 2 (PPK2) Imm44 PF15571.6 gi|73670321|ref|YP_306336.1| - 0.062 13.5 3.5 1.1 9.5 0.5 2.9 2 0 0 2 2 2 0 Immunity protein 44 ABC_tran PF00005.27 gi|73670322|ref|YP_306337.1| - 4.4e-24 85.5 0.0 6e-24 85.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73670322|ref|YP_306337.1| - 1.7e-11 44.5 0.2 4.5e-07 30.0 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|73670322|ref|YP_306337.1| - 1e-05 25.5 0.8 0.016 14.9 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|73670322|ref|YP_306337.1| - 0.00038 21.0 0.2 0.00072 20.1 0.2 1.4 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|73670322|ref|YP_306337.1| - 0.013 14.5 0.0 0.019 13.9 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SMC_N PF02463.19 gi|73670322|ref|YP_306337.1| - 0.015 14.7 1.1 0.19 11.1 0.3 2.1 1 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|73670322|ref|YP_306337.1| - 0.022 15.2 0.0 0.037 14.5 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|73670322|ref|YP_306337.1| - 0.027 14.4 0.1 0.052 13.4 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 gi|73670322|ref|YP_306337.1| - 0.032 14.0 0.2 0.064 13.0 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|73670322|ref|YP_306337.1| - 0.08 12.6 0.0 0.17 11.6 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|73670322|ref|YP_306337.1| - 0.13 12.4 0.0 0.2 11.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|73670322|ref|YP_306337.1| - 0.16 12.3 0.0 0.33 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 gi|73670322|ref|YP_306337.1| - 0.23 10.1 0.1 4.7 5.7 0.0 2.2 2 1 0 2 2 2 0 AAA domain Ion_trans_2 PF07885.16 gi|73670324|ref|YP_306339.1| - 2.2e-22 78.8 7.7 3e-22 78.4 7.7 1.2 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 gi|73670324|ref|YP_306339.1| - 0.0046 16.2 2.3 0.0098 15.1 2.3 1.6 1 1 0 1 1 1 1 Ion transport protein Skp1 PF01466.19 gi|73670325|ref|YP_306340.1| - 0.013 15.6 2.7 0.021 14.9 0.0 2.4 3 0 0 3 3 3 0 Skp1 family, dimerisation domain SIR2_2 PF13289.6 gi|73670326|ref|YP_306341.1| - 6.7e-22 78.1 0.0 1.5e-21 77.0 0.0 1.7 1 1 0 1 1 1 1 SIR2-like domain CHAT PF12770.7 gi|73670326|ref|YP_306341.1| - 2.7e-08 33.6 0.0 1.1e-07 31.6 0.0 1.8 1 1 0 1 1 1 1 CHAT domain WD40 PF00400.32 gi|73670327|ref|YP_306342.1| - 4.2e-107 347.0 51.4 6e-06 26.9 0.2 16.3 16 0 0 16 16 16 16 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 gi|73670327|ref|YP_306342.1| - 3.4e-51 171.5 10.9 0.0065 16.8 0.0 16.2 1 1 15 16 16 16 14 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 gi|73670327|ref|YP_306342.1| - 1.4e-41 142.6 5.6 0.038 12.9 0.0 15.1 1 1 13 15 15 15 13 WD40 region of Ge1, enhancer of mRNA-decapping protein PD40 PF07676.12 gi|73670327|ref|YP_306342.1| - 5.7e-33 112.2 21.9 0.12 12.4 0.1 15.1 9 3 6 15 15 15 8 WD40-like Beta Propeller Repeat eIF2A PF08662.11 gi|73670327|ref|YP_306342.1| - 1.3e-32 113.2 26.0 1.8e-05 24.7 0.2 8.2 1 1 9 10 10 10 10 Eukaryotic translation initiation factor eIF2A Nup160 PF11715.8 gi|73670327|ref|YP_306342.1| - 2.5e-31 108.9 20.6 0.1 11.2 0.0 14.2 4 4 8 13 13 13 13 Nucleoporin Nup120/160 NTNH_C PF08470.10 gi|73670327|ref|YP_306342.1| - 1.3e-21 77.2 0.3 0.049 13.5 0.0 8.5 1 1 6 8 8 8 5 Nontoxic nonhaemagglutinin C-terminal DUF5570 PF17731.1 gi|73670327|ref|YP_306342.1| - 1.8e-18 66.8 28.6 0.82 9.8 0.0 14.7 2 1 12 16 16 15 4 Family of unknown function (DUF5570) PQQ_2 PF13360.6 gi|73670327|ref|YP_306342.1| - 1.9e-16 60.4 33.1 0.00064 19.4 4.2 7.3 1 1 6 7 7 7 7 PQQ-like domain Proteasome_A_N PF10584.9 gi|73670327|ref|YP_306342.1| - 2.8e-16 58.8 5.2 33 4.3 0.0 13.6 15 0 0 15 15 15 0 Proteasome subunit A N-terminal signature WD40_like PF17005.5 gi|73670327|ref|YP_306342.1| - 4.5e-14 52.5 2.8 1 8.6 0.0 12.0 8 4 4 13 13 13 1 WD40-like domain Cytochrom_D1 PF02239.16 gi|73670327|ref|YP_306342.1| - 5.7e-14 51.4 11.1 0.048 12.2 0.1 8.0 1 1 10 11 11 11 6 Cytochrome D1 heme domain Coatomer_WDAD PF04053.14 gi|73670327|ref|YP_306342.1| - 2.8e-12 46.4 14.4 0.014 14.5 0.4 8.4 1 1 4 7 7 7 3 Coatomer WD associated region HPS3_N PF14761.6 gi|73670327|ref|YP_306342.1| - 4.7e-08 32.8 0.0 21 4.6 0.0 7.7 2 2 7 10 10 10 0 Hermansky-Pudlak syndrome 3 Me-amine-dh_H PF06433.11 gi|73670327|ref|YP_306342.1| - 3.4e-07 29.4 18.6 6.1 5.6 0.0 10.4 2 2 11 13 13 13 1 Methylamine dehydrogenase heavy chain (MADH) EcKinase PF02958.20 gi|73670327|ref|YP_306342.1| - 1.7e-06 27.6 13.7 0.31 10.3 0.1 6.8 3 3 4 7 7 7 1 Ecdysteroid kinase PUA_3 PF17785.1 gi|73670327|ref|YP_306342.1| - 5.4e-06 26.1 8.3 23 4.9 0.0 10.6 13 0 0 13 13 11 0 PUA-like domain AAA_16 PF13191.6 gi|73670327|ref|YP_306342.1| - 0.00036 21.0 0.0 0.0011 19.4 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain NAGPA PF09992.9 gi|73670327|ref|YP_306342.1| - 0.0014 18.8 13.1 15 5.8 0.3 7.4 1 1 6 7 7 7 0 Phosphodiester glycosidase Tox-MPTase2 PF15638.6 gi|73670327|ref|YP_306342.1| - 0.0061 16.3 7.3 68 3.1 0.0 7.9 10 0 0 10 10 9 0 Metallopeptidase toxin 2 PHZA_PHZB PF03284.13 gi|73670327|ref|YP_306342.1| - 0.046 13.4 13.7 25 4.5 0.0 8.7 5 3 6 11 11 11 0 Phenazine biosynthesis protein A/B RsgA_GTPase PF03193.16 gi|73670327|ref|YP_306342.1| - 0.15 11.9 0.0 0.37 10.7 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase Caudo_TAP PF02413.17 gi|73670327|ref|YP_306342.1| - 0.16 12.1 7.3 19 5.4 0.0 5.4 6 2 2 8 8 6 0 Caudovirales tail fibre assembly protein, lambda gpK AAA_23 PF13476.6 gi|73670327|ref|YP_306342.1| - 0.77 10.2 0.0 0.77 10.2 0.0 2.7 2 1 0 2 2 1 0 AAA domain UvrD-helicase PF00580.21 gi|73670327|ref|YP_306342.1| - 0.81 9.1 4.6 7.7 5.9 0.0 2.2 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain DUF4994 PF16385.5 gi|73670327|ref|YP_306342.1| - 1.1 9.2 6.0 1.7e+02 2.2 0.0 5.9 6 2 2 9 9 6 0 Domain of unknown function DUF2099 PF09872.9 gi|73670328|ref|YP_306343.1| - 3.6e-111 370.5 2.8 4.1e-111 370.3 2.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Sacchrp_dh_NADP PF03435.18 gi|73670328|ref|YP_306343.1| - 0.011 16.0 0.1 0.021 15.1 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain MTH865 PF07747.11 gi|73670329|ref|YP_306344.1| - 1.3e-27 95.3 0.0 1.5e-27 95.2 0.0 1.0 1 0 0 1 1 1 1 MTH865-like family HTH_20 PF12840.7 gi|73670330|ref|YP_306345.1| - 4.1e-06 26.7 0.1 3e-05 24.0 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|73670330|ref|YP_306345.1| - 2e-05 24.5 0.2 6.9e-05 22.8 0.2 2.0 1 1 1 2 2 2 1 Winged helix-turn-helix HTH_5 PF01022.20 gi|73670330|ref|YP_306345.1| - 3.3e-05 23.6 0.0 0.00012 21.9 0.0 2.0 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Rio2_N PF09202.11 gi|73670330|ref|YP_306345.1| - 0.024 14.8 0.2 0.1 12.8 0.0 2.1 2 0 0 2 2 2 0 Rio2, N-terminal Nas2_N PF18265.1 gi|73670330|ref|YP_306345.1| - 0.069 13.1 0.9 0.21 11.5 0.0 2.4 2 0 0 2 2 2 0 Nas2 N_terminal domain HTH_12 PF08461.10 gi|73670330|ref|YP_306345.1| - 0.13 12.2 0.8 0.43 10.6 0.1 2.2 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain Podoplanin PF05808.11 gi|73670330|ref|YP_306345.1| - 0.18 11.9 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 Podoplanin Tox-PL-2 PF15643.6 gi|73670330|ref|YP_306345.1| - 0.18 11.9 1.0 0.74 10.0 0.2 2.3 2 1 1 3 3 3 0 Papain fold toxin 2 DUF2099 PF09872.9 gi|73670331|ref|YP_306346.1| - 9.4e-115 382.2 0.8 1.1e-114 382.0 0.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) UPF0175 PF03683.13 gi|73670332|ref|YP_306347.1| - 6.6e-11 41.8 0.4 1.4e-10 40.7 0.1 1.7 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0175) PqqD PF05402.12 gi|73670332|ref|YP_306347.1| - 0.018 15.4 0.0 0.052 13.9 0.0 1.8 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) Peptidase_M26_C PF07580.14 gi|73670332|ref|YP_306347.1| - 0.026 13.0 0.4 0.035 12.6 0.4 1.1 1 0 0 1 1 1 0 M26 IgA1-specific Metallo-endopeptidase C-terminal region Rio2_N PF09202.11 gi|73670332|ref|YP_306347.1| - 0.091 13.0 0.3 3.5 7.9 0.1 2.5 2 0 0 2 2 2 0 Rio2, N-terminal DUF3368 PF11848.8 gi|73670333|ref|YP_306348.1| - 5e-05 23.0 0.0 0.00011 21.9 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3368) CUE PF02845.16 gi|73670333|ref|YP_306348.1| - 0.021 14.5 0.0 0.063 13.0 0.0 1.8 1 0 0 1 1 1 0 CUE domain DUF4428 PF14471.6 gi|73670333|ref|YP_306348.1| - 0.04 13.9 0.4 0.098 12.6 0.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) EIIA-man PF03610.16 gi|73670333|ref|YP_306348.1| - 0.18 12.0 0.0 0.27 11.5 0.0 1.3 1 0 0 1 1 1 0 PTS system fructose IIA component Poxvirus_B22R_N PF13169.6 gi|73670334|ref|YP_306349.1| - 0.098 13.2 0.0 0.098 13.2 0.0 3.1 3 0 0 3 3 3 0 Poxvirus B22R protein N-terminal AMP-binding_C_2 PF14535.6 gi|73670337|ref|YP_306352.1| - 2.2e-28 98.4 0.2 5.3e-28 97.2 0.2 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|73670337|ref|YP_306352.1| - 6.5e-17 61.2 0.0 2e-16 59.6 0.0 1.7 1 1 0 1 1 1 1 AMP-binding enzyme Stn1_C PF12659.7 gi|73670337|ref|YP_306352.1| - 0.063 13.2 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 Telomere capping C-terminal wHTH RNA_pol_Rpb5_C PF01191.19 gi|73670337|ref|YP_306352.1| - 0.087 12.7 0.2 20 5.1 0.0 2.9 2 0 0 2 2 2 0 RNA polymerase Rpb5, C-terminal domain DUF1843 PF08898.10 gi|73670337|ref|YP_306352.1| - 0.15 12.5 0.1 0.38 11.3 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1843) Disaggr_assoc PF08480.10 gi|73670338|ref|YP_306353.1| - 1.7e-66 223.8 19.7 3.4e-65 219.5 14.5 2.5 2 0 0 2 2 2 2 Disaggregatase related Beta_helix PF13229.6 gi|73670338|ref|YP_306353.1| - 3.8e-14 52.8 48.6 1.8e-11 44.1 20.6 3.6 2 1 1 3 3 3 2 Right handed beta helix region Methyltransf_11 PF08241.12 gi|73670339|ref|YP_306354.1| - 1e-21 77.4 0.0 2.7e-21 76.0 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670339|ref|YP_306354.1| - 1.2e-20 74.0 0.0 2.6e-20 72.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73670339|ref|YP_306354.1| - 1.3e-19 70.5 0.0 1.9e-19 69.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|73670339|ref|YP_306354.1| - 4.7e-18 65.4 0.0 6.7e-18 64.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73670339|ref|YP_306354.1| - 9.6e-16 58.4 0.0 6.6e-15 55.7 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73670339|ref|YP_306354.1| - 1e-14 54.7 0.0 1.9e-14 53.9 0.0 1.4 2 0 0 2 2 1 1 Methyltransferase domain PCMT PF01135.19 gi|73670339|ref|YP_306354.1| - 1.8e-08 34.4 0.0 3.2e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 gi|73670339|ref|YP_306354.1| - 3.2e-06 26.7 0.0 6.3e-06 25.8 0.0 1.5 1 1 0 1 1 1 1 Putative methyltransferase CMAS PF02353.20 gi|73670339|ref|YP_306354.1| - 0.00022 20.6 0.1 0.00033 20.0 0.1 1.4 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|73670339|ref|YP_306354.1| - 0.002 17.7 0.0 0.0038 16.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.15 gi|73670339|ref|YP_306354.1| - 0.0022 17.9 0.0 0.025 14.4 0.0 2.1 2 0 0 2 2 2 1 Hypothetical methyltransferase GCD14 PF08704.10 gi|73670339|ref|YP_306354.1| - 0.0076 16.0 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_9 PF08003.11 gi|73670339|ref|YP_306354.1| - 0.028 13.3 0.0 0.036 13.0 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1698) PrmA PF06325.13 gi|73670339|ref|YP_306354.1| - 0.03 13.7 0.0 0.064 12.6 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) GidB PF02527.15 gi|73670339|ref|YP_306354.1| - 0.046 13.1 0.0 0.076 12.3 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_29 PF03141.16 gi|73670339|ref|YP_306354.1| - 0.076 11.5 0.1 0.15 10.6 0.1 1.5 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Pox_MCEL PF03291.16 gi|73670339|ref|YP_306354.1| - 0.11 11.5 0.0 2.1 7.3 0.0 2.1 1 1 0 1 1 1 0 mRNA capping enzyme MetW PF07021.12 gi|73670339|ref|YP_306354.1| - 0.12 12.0 0.0 0.26 10.9 0.0 1.5 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW Fibrillarin PF01269.17 gi|73670339|ref|YP_306354.1| - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin UN_NPL4 PF11543.8 gi|73670339|ref|YP_306354.1| - 0.15 12.5 0.0 6.7 7.3 0.0 2.4 2 0 0 2 2 2 0 Nuclear pore localisation protein NPL4 PKD PF00801.20 gi|73670340|ref|YP_306355.1| - 5.9e-06 26.0 0.6 9.4e-06 25.4 0.1 1.6 2 0 0 2 2 2 1 PKD domain PocR PF10114.9 gi|73670341|ref|YP_306356.1| - 2.4e-46 157.5 0.0 7.2e-46 155.9 0.0 1.9 1 0 0 1 1 1 1 Sensory domain found in PocR PAS_3 PF08447.12 gi|73670341|ref|YP_306356.1| - 3e-44 149.2 1.3 1e-19 70.6 0.0 3.8 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.12 gi|73670341|ref|YP_306356.1| - 1.4e-28 98.8 3.5 6.1e-28 96.7 3.5 2.3 1 0 0 1 1 1 1 Histidine kinase PAS PF00989.25 gi|73670341|ref|YP_306356.1| - 6.3e-26 90.6 0.1 1.9e-11 44.0 0.0 4.4 4 0 0 4 4 4 3 PAS fold PAS_9 PF13426.7 gi|73670341|ref|YP_306356.1| - 1.3e-22 80.0 2.4 9.2e-17 61.2 0.1 4.8 5 0 0 5 5 5 2 PAS domain PAS_4 PF08448.10 gi|73670341|ref|YP_306356.1| - 2.7e-20 72.7 0.0 6.7e-13 48.9 0.0 4.4 4 1 1 5 5 5 2 PAS fold HATPase_c PF02518.26 gi|73670341|ref|YP_306356.1| - 1.1e-09 38.8 0.4 4.9e-09 36.7 0.4 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|73670341|ref|YP_306356.1| - 2.5e-06 27.4 0.0 1.6e-05 24.8 0.0 2.3 2 0 0 2 2 2 1 PAS domain HWE_HK PF07536.14 gi|73670341|ref|YP_306356.1| - 0.00089 19.9 0.9 0.00089 19.9 0.9 2.2 2 0 0 2 2 2 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|73670341|ref|YP_306356.1| - 0.007 16.3 0.0 0.018 15.0 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_10 PF13596.6 gi|73670341|ref|YP_306356.1| - 0.043 14.4 0.0 0.19 12.3 0.0 2.2 1 0 0 1 1 1 0 PAS domain Pro_Al_protease PF02983.14 gi|73670341|ref|YP_306356.1| - 0.16 12.0 0.2 0.71 10.0 0.0 2.0 2 0 0 2 2 2 0 Alpha-lytic protease prodomain Sec34 PF04136.15 gi|73670341|ref|YP_306356.1| - 6.5 6.6 10.6 0.75 9.7 1.4 3.0 3 0 0 3 3 3 0 Sec34-like family Peptidase_M23 PF01551.22 gi|73670342|ref|YP_306357.1| - 6.1e-13 48.8 0.0 1.7e-12 47.4 0.0 1.7 1 1 0 1 1 1 1 Peptidase family M23 TrkA_N PF02254.18 gi|73670343|ref|YP_306358.1| - 0.029 14.6 0.0 0.06 13.6 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain DUF72 PF01904.18 gi|73670344|ref|YP_306359.1| - 5.1e-34 118.3 0.1 6.5e-34 118.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 DUF2067 PF09840.9 gi|73670344|ref|YP_306359.1| - 0.17 11.4 0.0 0.29 10.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) TaqI_C PF12950.7 gi|73670345|ref|YP_306360.1| - 0.0019 18.3 0.2 0.0059 16.7 0.2 1.9 1 1 0 1 1 1 1 TaqI-like C-terminal specificity domain ALMS_motif PF15309.6 gi|73670345|ref|YP_306360.1| - 0.024 15.1 1.2 0.049 14.1 1.2 1.5 1 0 0 1 1 1 0 ALMS motif DUF2795 PF11387.8 gi|73670346|ref|YP_306361.1| - 5e-12 45.8 0.0 7.5e-12 45.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) OrfB_IS605 PF01385.19 gi|73670347|ref|YP_306362.1| - 8.8e-26 90.5 2.5 2.1e-25 89.2 2.5 1.6 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73670347|ref|YP_306362.1| - 2.2e-23 82.0 0.3 4.4e-23 81.0 0.3 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73670347|ref|YP_306362.1| - 1.1e-20 72.9 0.5 2.1e-20 71.9 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73670347|ref|YP_306362.1| - 0.00092 19.3 2.0 0.0012 19.0 0.6 1.8 2 0 0 2 2 2 1 Piccolo Zn-finger zf-RanBP PF00641.18 gi|73670347|ref|YP_306362.1| - 1.9 7.9 6.9 9.6 5.6 0.2 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Y1_Tnp PF01797.16 gi|73670348|ref|YP_306363.1| - 2.1e-27 95.6 0.9 2.3e-27 95.5 0.9 1.0 1 0 0 1 1 1 1 Transposase IS200 like AAA PF00004.29 gi|73670349|ref|YP_306364.1| - 4.5e-96 318.3 0.0 4.1e-48 163.2 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|73670349|ref|YP_306364.1| - 3.7e-30 103.5 0.4 1.2e-15 57.0 0.2 2.7 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|73670349|ref|YP_306364.1| - 4.1e-26 91.0 0.0 1.5e-25 89.2 0.0 2.0 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_16 PF13191.6 gi|73670349|ref|YP_306364.1| - 9.8e-16 58.6 0.0 5.7e-07 30.1 0.0 3.2 2 1 0 2 2 2 2 AAA ATPase domain RuvB_N PF05496.12 gi|73670349|ref|YP_306364.1| - 1.9e-14 53.7 0.0 2e-06 27.6 0.0 2.6 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|73670349|ref|YP_306364.1| - 4.5e-14 52.9 0.0 2.6e-08 34.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) CDC48_2 PF02933.17 gi|73670349|ref|YP_306364.1| - 1e-13 50.9 0.1 3.6e-13 49.1 0.1 2.0 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_5 PF07728.14 gi|73670349|ref|YP_306364.1| - 6.5e-12 45.6 0.5 0.00047 20.2 0.2 3.8 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|73670349|ref|YP_306364.1| - 4.6e-11 43.2 0.6 0.001 19.4 0.0 4.4 2 2 1 4 4 4 2 AAA domain AAA_14 PF13173.6 gi|73670349|ref|YP_306364.1| - 4.6e-10 39.6 0.0 5.9e-05 23.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|73670349|ref|YP_306364.1| - 1.6e-09 37.5 0.0 0.0013 18.0 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain IstB_IS21 PF01695.17 gi|73670349|ref|YP_306364.1| - 4.7e-09 36.2 0.0 0.0035 17.1 0.0 2.9 3 0 0 3 3 3 2 IstB-like ATP binding protein AAA_33 PF13671.6 gi|73670349|ref|YP_306364.1| - 5.8e-09 36.2 0.0 0.00041 20.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|73670349|ref|YP_306364.1| - 3.4e-08 33.5 0.0 0.0079 15.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|73670349|ref|YP_306364.1| - 4.8e-08 33.6 0.0 0.0065 17.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|73670349|ref|YP_306364.1| - 6e-08 32.3 0.3 0.0088 15.4 0.0 2.8 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|73670349|ref|YP_306364.1| - 7.2e-08 32.3 0.0 0.019 14.7 0.0 3.4 3 1 0 3 3 2 2 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|73670349|ref|YP_306364.1| - 1.1e-07 32.2 0.0 0.017 15.5 0.0 2.7 2 0 0 2 2 2 2 RNA helicase ABC_tran PF00005.27 gi|73670349|ref|YP_306364.1| - 1.3e-07 32.2 0.0 0.0098 16.4 0.0 2.5 2 0 0 2 2 2 2 ABC transporter NACHT PF05729.12 gi|73670349|ref|YP_306364.1| - 2.1e-07 31.0 0.2 0.24 11.3 0.0 3.8 3 1 1 4 4 4 2 NACHT domain Parvo_NS1 PF01057.17 gi|73670349|ref|YP_306364.1| - 9.2e-07 28.2 0.1 0.026 13.6 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_7 PF12775.7 gi|73670349|ref|YP_306364.1| - 1.2e-06 28.1 0.0 0.041 13.4 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_28 PF13521.6 gi|73670349|ref|YP_306364.1| - 1.4e-06 28.6 0.0 0.03 14.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.10 gi|73670349|ref|YP_306364.1| - 3.5e-06 26.9 0.1 0.072 13.1 0.0 3.2 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain TsaE PF02367.17 gi|73670349|ref|YP_306364.1| - 9e-06 25.7 0.0 0.12 12.3 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 gi|73670349|ref|YP_306364.1| - 1.2e-05 25.0 1.3 0.37 10.4 0.0 3.4 3 1 0 3 3 3 2 AAA domain Zeta_toxin PF06414.12 gi|73670349|ref|YP_306364.1| - 1.7e-05 24.2 0.1 0.22 10.8 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin ATPase PF06745.13 gi|73670349|ref|YP_306364.1| - 1.7e-05 24.3 0.2 0.48 9.7 0.1 3.2 2 1 0 2 2 2 2 KaiC PhoH PF02562.16 gi|73670349|ref|YP_306364.1| - 2.2e-05 24.0 0.9 0.44 10.0 0.0 3.6 3 0 0 3 3 3 2 PhoH-like protein ATPase_2 PF01637.18 gi|73670349|ref|YP_306364.1| - 4.4e-05 23.5 0.0 0.22 11.4 0.1 3.1 2 1 0 2 2 2 2 ATPase domain predominantly from Archaea DUF2075 PF09848.9 gi|73670349|ref|YP_306364.1| - 7.8e-05 22.1 0.0 0.21 10.8 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_3 PF07726.11 gi|73670349|ref|YP_306364.1| - 0.00012 21.9 0.0 0.56 10.1 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 gi|73670349|ref|YP_306364.1| - 0.00015 21.0 0.0 0.58 9.3 0.0 2.5 2 0 0 2 2 2 2 NB-ARC domain AAA_17 PF13207.6 gi|73670349|ref|YP_306364.1| - 0.00018 21.9 0.1 1.3 9.4 0.0 3.3 3 0 0 3 3 3 2 AAA domain Sigma54_activ_2 PF14532.6 gi|73670349|ref|YP_306364.1| - 0.00018 21.6 0.0 0.26 11.4 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain DUF815 PF05673.13 gi|73670349|ref|YP_306364.1| - 0.00024 20.3 0.0 0.41 9.8 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Bac_DnaA PF00308.18 gi|73670349|ref|YP_306364.1| - 0.00026 20.9 0.1 1.5 8.6 0.0 2.9 2 1 0 2 2 2 2 Bacterial dnaA protein AAA_11 PF13086.6 gi|73670349|ref|YP_306364.1| - 0.0003 20.7 0.0 0.85 9.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|73670349|ref|YP_306364.1| - 0.0004 20.2 0.1 1.1 8.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.6 gi|73670349|ref|YP_306364.1| - 0.00053 20.3 0.0 1.3 9.4 0.0 2.6 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 gi|73670349|ref|YP_306364.1| - 0.0019 18.3 0.0 1 9.3 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Guanylate_kin PF00625.21 gi|73670349|ref|YP_306364.1| - 0.003 17.3 0.1 11 5.6 0.0 4.2 2 2 2 4 4 4 0 Guanylate kinase TniB PF05621.11 gi|73670349|ref|YP_306364.1| - 0.0033 16.8 0.0 1.4 8.3 0.0 3.3 4 0 0 4 4 4 1 Bacterial TniB protein SKI PF01202.22 gi|73670349|ref|YP_306364.1| - 0.016 15.3 0.2 20 5.3 0.0 3.7 4 0 0 4 4 4 0 Shikimate kinase NTPase_1 PF03266.15 gi|73670349|ref|YP_306364.1| - 0.018 14.9 0.1 5.4 6.9 0.0 2.8 2 1 0 2 2 2 0 NTPase IPT PF01745.16 gi|73670349|ref|YP_306364.1| - 0.02 14.3 0.1 3.4 7.0 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase KAP_NTPase PF07693.14 gi|73670349|ref|YP_306364.1| - 0.022 14.0 0.3 13 4.9 0.0 3.6 2 2 1 4 4 4 0 KAP family P-loop domain Cytidylate_kin PF02224.18 gi|73670349|ref|YP_306364.1| - 0.03 14.1 0.1 8.3 6.1 0.0 2.5 2 0 0 2 2 2 0 Cytidylate kinase AFG1_ATPase PF03969.16 gi|73670349|ref|YP_306364.1| - 0.031 13.2 0.0 4.3 6.1 0.0 2.3 2 0 0 2 2 2 0 AFG1-like ATPase PduV-EutP PF10662.9 gi|73670349|ref|YP_306364.1| - 0.043 13.6 0.0 7.7 6.3 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_29 PF13555.6 gi|73670349|ref|YP_306364.1| - 0.069 12.9 0.0 15 5.5 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain T2SSE PF00437.20 gi|73670349|ref|YP_306364.1| - 0.11 11.6 0.0 15 4.5 0.0 2.6 2 0 0 2 2 2 0 Type II/IV secretion system protein MCM PF00493.23 gi|73670349|ref|YP_306364.1| - 0.12 11.5 0.0 8.8 5.3 0.0 2.4 2 0 0 2 2 2 0 MCM P-loop domain CPT PF07931.12 gi|73670349|ref|YP_306364.1| - 0.13 12.1 0.0 21 4.9 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_6 PF12774.7 gi|73670349|ref|YP_306364.1| - 0.18 10.7 0.3 13 4.7 0.0 2.8 2 1 1 3 3 3 0 Hydrolytic ATP binding site of dynein motor region cobW PF02492.19 gi|73670349|ref|YP_306364.1| - 0.18 11.4 0.1 17 5.0 0.0 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain LPG_synthase_TM PF03706.13 gi|73670350|ref|YP_306365.1| - 4.7e-37 128.1 34.8 6.1e-37 127.8 34.8 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Zn-ribbon_8 PF09723.10 gi|73670351|ref|YP_306366.1| - 1.3e-06 28.4 0.9 2.2e-06 27.6 0.9 1.4 1 0 0 1 1 1 1 Zinc ribbon domain DZR PF12773.7 gi|73670351|ref|YP_306366.1| - 9.1e-05 22.4 0.7 0.00011 22.1 0.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 gi|73670351|ref|YP_306366.1| - 0.00046 20.2 0.8 0.00047 20.1 0.8 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TFIIS_C PF01096.18 gi|73670351|ref|YP_306366.1| - 0.00078 19.3 3.0 0.14 12.0 0.2 2.2 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) Zn_Tnp_IS1 PF03811.13 gi|73670351|ref|YP_306366.1| - 0.0016 18.1 2.5 0.0059 16.3 0.2 2.2 2 0 0 2 2 2 1 InsA N-terminal domain TackOD1 PF18551.1 gi|73670351|ref|YP_306366.1| - 0.0017 18.1 1.0 0.0017 18.1 1.0 1.1 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 CcmH PF03918.14 gi|73670351|ref|YP_306366.1| - 0.0043 16.3 0.1 0.0043 16.3 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein zf-C3HC4_3 PF13920.6 gi|73670351|ref|YP_306366.1| - 0.0068 16.2 0.6 0.011 15.6 0.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) DUF2197 PF09963.9 gi|73670351|ref|YP_306366.1| - 0.0088 16.3 1.4 0.13 12.5 0.0 2.4 3 0 0 3 3 3 1 Uncharacterized protein conserved in bacteria (DUF2197) zf-trcl PF13451.6 gi|73670351|ref|YP_306366.1| - 0.011 15.6 2.0 0.38 10.7 0.3 2.1 2 0 0 2 2 2 0 Probable zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|73670351|ref|YP_306366.1| - 0.017 14.6 6.4 0.78 9.3 1.4 2.4 2 1 0 2 2 2 0 TFIIB zinc-binding Rubredoxin_2 PF18073.1 gi|73670351|ref|YP_306366.1| - 0.019 14.7 5.5 0.33 10.7 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-ribbon_3 PF13248.6 gi|73670351|ref|YP_306366.1| - 0.021 14.2 3.4 1.7 8.1 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 gi|73670351|ref|YP_306366.1| - 0.021 14.7 0.7 3 7.8 0.0 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Zn_Tnp_IS91 PF14319.6 gi|73670351|ref|YP_306366.1| - 0.025 14.6 0.7 0.033 14.2 0.7 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain zf-RING_5 PF14634.6 gi|73670351|ref|YP_306366.1| - 0.026 14.5 1.7 0.035 14.1 1.7 1.2 1 0 0 1 1 1 0 zinc-RING finger domain DUF4428 PF14471.6 gi|73670351|ref|YP_306366.1| - 0.036 14.0 2.2 0.059 13.3 2.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) DpnI PF06044.12 gi|73670351|ref|YP_306366.1| - 0.066 12.8 2.5 0.18 11.4 0.2 1.9 1 1 1 2 2 2 0 Dam-replacing family zf-H2C2_2 PF13465.6 gi|73670351|ref|YP_306366.1| - 0.091 13.2 2.8 3.7 8.2 0.3 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zinc_ribbon_4 PF13717.6 gi|73670351|ref|YP_306366.1| - 0.1 12.6 5.1 7.3 6.6 5.1 2.3 1 1 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|73670351|ref|YP_306366.1| - 0.12 12.1 3.5 0.19 11.4 3.5 1.3 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit NRDD PF13597.6 gi|73670351|ref|YP_306366.1| - 0.15 10.8 1.3 0.17 10.6 1.3 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase A2L_zn_ribbon PF08792.10 gi|73670351|ref|YP_306366.1| - 0.23 11.2 0.1 0.23 11.2 0.1 2.4 3 0 0 3 3 3 0 A2L zinc ribbon domain DUF35_N PF12172.8 gi|73670351|ref|YP_306366.1| - 0.25 11.3 1.7 8.8 6.3 0.1 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn_Tnp_IS1595 PF12760.7 gi|73670351|ref|YP_306366.1| - 0.37 10.8 3.4 2.6 8.1 0.4 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf_UBZ PF18439.1 gi|73670351|ref|YP_306366.1| - 0.38 10.4 3.5 1.1 8.9 0.2 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-C2H2_4 PF13894.6 gi|73670351|ref|YP_306366.1| - 0.81 10.7 3.7 4.5 8.4 0.2 2.4 3 0 0 3 3 2 0 C2H2-type zinc finger zinc_ribbon_5 PF13719.6 gi|73670351|ref|YP_306366.1| - 1.1 9.1 5.8 23 4.9 5.8 2.2 1 1 0 1 1 1 0 zinc-ribbon domain DUF4969 PF16339.5 gi|73670353|ref|YP_306368.1| - 0.061 13.7 0.6 0.15 12.4 0.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4969) DUF4573 PF15140.6 gi|73670354|ref|YP_306369.1| - 0.00041 20.2 1.3 0.001 18.9 1.3 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4573) DUF4330 PF14221.6 gi|73670354|ref|YP_306369.1| - 0.0063 16.7 5.6 0.0075 16.5 5.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4330) DUF4969 PF16339.5 gi|73670354|ref|YP_306369.1| - 0.099 13.0 0.4 0.3 11.4 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4969) AstE_AspA PF04952.14 gi|73670355|ref|YP_306370.1| - 1.1e-06 28.0 0.0 1.3e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family TPR_1 PF00515.28 gi|73670356|ref|YP_306371.1| - 1.4e-91 296.9 30.7 1.8e-10 40.2 0.0 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670356|ref|YP_306371.1| - 1.6e-78 252.6 32.6 3.2e-08 33.1 0.0 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670356|ref|YP_306371.1| - 1.2e-75 248.9 41.3 3.7e-09 36.1 1.6 10.1 4 2 6 10 10 10 10 TPR repeat TPR_8 PF13181.6 gi|73670356|ref|YP_306371.1| - 1e-67 218.8 29.0 2.5e-07 30.3 0.0 10.3 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73670356|ref|YP_306371.1| - 9.7e-60 194.8 19.3 7.8e-07 29.0 0.0 10.3 10 0 0 10 10 10 9 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670356|ref|YP_306371.1| - 1e-52 176.5 23.7 5.2e-12 46.2 1.6 6.5 3 2 5 8 8 8 8 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670356|ref|YP_306371.1| - 6.5e-47 154.2 16.9 0.00018 22.1 0.0 10.2 2 2 8 10 10 10 10 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670356|ref|YP_306371.1| - 4.5e-45 151.8 12.5 6e-10 39.3 0.1 6.6 4 2 2 6 6 6 6 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670356|ref|YP_306371.1| - 1.8e-44 150.1 20.7 1.8e-09 38.0 0.5 6.7 2 2 4 7 7 7 7 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670356|ref|YP_306371.1| - 3.4e-30 103.0 25.1 5.9e-05 22.8 0.1 10.2 10 0 0 10 10 10 5 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670356|ref|YP_306371.1| - 3.5e-30 101.8 15.8 0.0012 18.7 0.0 10.2 8 2 2 10 10 10 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670356|ref|YP_306371.1| - 5.6e-27 93.7 4.2 1.7e-05 24.9 0.1 5.8 3 1 4 7 7 7 7 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670356|ref|YP_306371.1| - 1e-24 86.5 10.9 1.2e-08 35.1 0.8 4.5 1 1 4 5 5 5 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|73670356|ref|YP_306371.1| - 6.7e-23 79.8 19.9 0.045 14.4 0.2 10.2 10 0 0 10 10 10 4 Tetratricopeptide repeat MIT PF04212.18 gi|73670356|ref|YP_306371.1| - 3.4e-14 52.7 30.1 0.077 13.1 0.2 9.9 9 1 0 10 10 10 6 MIT (microtubule interacting and transport) domain NARP1 PF12569.8 gi|73670356|ref|YP_306371.1| - 5e-14 52.1 11.5 0.0013 17.7 0.2 5.1 1 1 3 5 5 5 4 NMDA receptor-regulated protein 1 DUF3856 PF12968.7 gi|73670356|ref|YP_306371.1| - 1.1e-13 51.5 15.2 0.086 12.9 0.1 8.2 1 1 5 7 7 7 3 Domain of Unknown Function (DUF3856) BTAD PF03704.17 gi|73670356|ref|YP_306371.1| - 6.2e-10 39.7 5.9 0.13 12.7 1.9 4.7 1 1 3 5 5 5 4 Bacterial transcriptional activator domain SRP_TPR_like PF17004.5 gi|73670356|ref|YP_306371.1| - 1.1e-09 38.4 8.6 0.01 15.9 0.8 4.6 1 1 3 5 5 5 3 Putative TPR-like repeat TPR_15 PF13429.6 gi|73670356|ref|YP_306371.1| - 1.7e-09 37.3 12.4 0.0026 17.0 3.6 4.5 1 1 3 4 4 4 4 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|73670356|ref|YP_306371.1| - 2.6e-09 36.9 7.8 0.00017 21.1 0.3 3.9 1 1 3 4 4 4 2 Coatomer epsilon subunit PPR PF01535.20 gi|73670356|ref|YP_306371.1| - 4.6e-08 32.8 10.9 0.19 12.1 0.0 8.6 9 0 0 9 9 8 1 PPR repeat TPR_3 PF07720.12 gi|73670356|ref|YP_306371.1| - 9.4e-08 31.9 23.0 1.4 9.0 0.0 9.3 10 0 0 10 10 9 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|73670356|ref|YP_306371.1| - 1.1e-07 31.2 13.0 0.25 10.8 0.0 8.4 10 0 0 10 10 10 2 SHNi-TPR Fis1_TPR_C PF14853.6 gi|73670356|ref|YP_306371.1| - 2.1e-06 27.7 14.6 1.4 9.0 0.0 8.1 6 3 3 9 9 9 1 Fis1 C-terminal tetratricopeptide repeat TPR_20 PF14561.6 gi|73670356|ref|YP_306371.1| - 3.4e-06 27.3 10.0 0.1 13.0 0.3 5.5 3 2 3 6 6 6 2 Tetratricopeptide repeat FAT PF02259.23 gi|73670356|ref|YP_306371.1| - 5.4e-06 25.9 10.9 0.88 8.7 0.5 6.0 1 1 4 5 5 5 3 FAT domain Rapsyn_N PF10579.9 gi|73670356|ref|YP_306371.1| - 3.8e-05 23.7 1.0 0.87 9.7 0.1 4.5 3 2 2 5 5 5 1 Rapsyn N-terminal myristoylation and linker region HTH_Bact PF18768.1 gi|73670356|ref|YP_306371.1| - 0.00024 20.6 6.6 6.1 6.5 0.0 6.6 7 0 0 7 7 6 0 Helix-turn-helix bacterial domain TPR_5 PF12688.7 gi|73670356|ref|YP_306371.1| - 0.00039 20.6 3.4 3.3 8.0 0.1 5.1 3 2 1 4 4 4 1 Tetratrico peptide repeat Alkyl_sulf_dimr PF14863.6 gi|73670356|ref|YP_306371.1| - 0.00044 20.7 5.4 2.6 8.5 0.0 4.5 3 1 1 4 4 4 1 Alkyl sulfatase dimerisation NRBF2_MIT PF17169.4 gi|73670356|ref|YP_306371.1| - 0.00045 20.4 8.1 6.8 7.0 0.0 6.5 4 2 3 7 7 7 0 MIT domain of nuclear receptor-binding factor 2 ANAPC5 PF12862.7 gi|73670356|ref|YP_306371.1| - 0.00099 19.1 7.3 2 8.5 0.2 6.4 3 2 3 6 6 6 1 Anaphase-promoting complex subunit 5 Wzy_C_2 PF11846.8 gi|73670356|ref|YP_306371.1| - 0.018 15.0 3.2 7.4 6.4 0.1 3.8 3 2 1 4 4 4 0 Virulence factor membrane-bound polymerase, C-terminal Pep3_Vps18 PF05131.14 gi|73670356|ref|YP_306371.1| - 0.02 14.7 1.4 7.5 6.4 0.2 3.2 2 1 0 2 2 2 0 Pep3/Vps18/deep orange family Spectrin PF00435.21 gi|73670356|ref|YP_306371.1| - 0.028 14.9 1.2 2.6 8.6 0.0 3.4 3 1 1 4 4 3 0 Spectrin repeat DUF1510 PF07423.11 gi|73670356|ref|YP_306371.1| - 0.041 14.0 5.1 11 6.3 0.2 4.3 3 3 1 5 5 3 0 Domain of unknown function (DUF1510) PknG_TPR PF16918.5 gi|73670356|ref|YP_306371.1| - 0.043 12.5 2.0 0.096 11.4 0.1 2.3 2 1 0 2 2 2 0 Protein kinase G tetratricopeptide repeat DUF627 PF04781.12 gi|73670356|ref|YP_306371.1| - 0.052 13.6 2.8 62 3.7 0.0 4.8 3 2 0 4 4 4 0 Protein of unknown function (DUF627) RPN7 PF10602.9 gi|73670356|ref|YP_306371.1| - 0.078 12.7 12.9 28 4.4 0.1 5.9 2 2 3 6 6 6 0 26S proteasome subunit RPN7 DUF851 PF05867.11 gi|73670356|ref|YP_306371.1| - 0.086 12.3 0.0 38 3.6 0.0 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF851) IglC PF11550.8 gi|73670356|ref|YP_306371.1| - 0.11 12.0 0.1 0.25 10.8 0.1 1.6 1 0 0 1 1 1 0 Intracellular growth locus C protein TAL_effector PF03377.13 gi|73670356|ref|YP_306371.1| - 0.15 12.4 0.0 1.4 9.3 0.0 2.7 2 0 0 2 2 2 0 TAL effector repeat Acyl-CoA_ox_N PF14749.6 gi|73670356|ref|YP_306371.1| - 0.17 12.4 1.0 4.1 8.0 0.0 3.4 2 1 1 3 3 2 0 Acyl-coenzyme A oxidase N-terminal 4HB_MCP_1 PF12729.7 gi|73670356|ref|YP_306371.1| - 1.5 8.4 16.3 13 5.2 0.2 6.1 3 3 4 7 7 7 0 Four helix bundle sensory module for signal transduction SPO22 PF08631.10 gi|73670356|ref|YP_306371.1| - 2 7.8 8.6 19 4.6 0.0 4.9 6 1 1 7 7 6 0 Meiosis protein SPO22/ZIP4 like HAD_2 PF13419.6 gi|73670357|ref|YP_306372.1| - 1.5e-30 106.6 0.0 1.8e-30 106.3 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73670357|ref|YP_306372.1| - 4.5e-19 69.6 0.1 1.6e-17 64.5 0.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|73670357|ref|YP_306372.1| - 3.8e-10 39.7 0.0 8.2e-10 38.6 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|73670357|ref|YP_306372.1| - 0.0015 18.9 0.1 0.0022 18.4 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF705 PF05152.12 gi|73670357|ref|YP_306372.1| - 0.023 14.1 0.0 0.49 9.8 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF705) PGP_phosphatase PF09419.10 gi|73670357|ref|YP_306372.1| - 0.035 13.7 0.2 6.7 6.3 0.1 2.6 2 2 1 3 3 3 0 Mitochondrial PGP phosphatase Hydrolase_6 PF13344.6 gi|73670357|ref|YP_306372.1| - 0.19 11.9 0.0 0.58 10.3 0.0 1.7 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase TPR_1 PF00515.28 gi|73670358|ref|YP_306373.1| - 4.1e-72 235.3 23.2 5.7e-11 41.7 0.2 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670358|ref|YP_306373.1| - 9.8e-56 181.5 23.8 3.4e-08 33.0 0.2 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670358|ref|YP_306373.1| - 6.5e-46 150.7 20.6 7.3e-07 28.9 0.1 8.2 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670358|ref|YP_306373.1| - 9.2e-39 130.9 22.0 3e-06 26.8 0.0 8.5 5 3 3 8 8 8 8 TPR repeat TPR_12 PF13424.6 gi|73670358|ref|YP_306373.1| - 2.7e-34 117.3 10.0 5.9e-12 45.7 0.1 5.9 2 1 2 5 5 5 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670358|ref|YP_306373.1| - 6.1e-31 106.8 9.8 5.9e-08 33.2 0.0 5.0 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73670358|ref|YP_306373.1| - 9.8e-31 103.9 12.6 0.00029 21.0 0.1 8.0 8 1 0 8 8 8 6 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670358|ref|YP_306373.1| - 8.7e-29 99.5 0.4 2.5e-07 30.7 0.9 6.0 2 2 4 6 6 6 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670358|ref|YP_306373.1| - 8.1e-27 91.6 13.7 0.00042 20.9 0.0 8.2 2 2 6 8 8 8 8 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670358|ref|YP_306373.1| - 3.2e-21 75.6 14.1 0.00016 22.1 0.4 6.3 2 2 4 7 7 7 5 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73670358|ref|YP_306373.1| - 2.4e-20 71.7 11.0 0.0099 16.5 0.2 8.3 8 1 1 9 9 9 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670358|ref|YP_306373.1| - 3.5e-17 61.7 17.7 0.0052 16.6 0.4 7.5 8 0 0 8 8 8 6 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670358|ref|YP_306373.1| - 7.3e-14 51.8 8.3 0.00021 21.4 0.1 4.3 1 1 5 6 6 6 6 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|73670358|ref|YP_306373.1| - 2.4e-11 42.8 12.5 0.32 11.1 0.0 8.2 6 2 2 8 8 8 3 Tetratricopeptide repeat DUF3856 PF12968.7 gi|73670358|ref|YP_306373.1| - 1.4e-10 41.4 8.8 0.0022 18.1 0.1 5.7 1 1 6 7 7 7 4 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.6 gi|73670358|ref|YP_306373.1| - 1.2e-07 31.7 9.0 0.48 10.5 0.0 6.4 5 2 2 7 7 7 2 Fis1 C-terminal tetratricopeptide repeat TPR_15 PF13429.6 gi|73670358|ref|YP_306373.1| - 4e-05 23.0 7.9 2.4 7.3 0.3 5.1 2 2 2 4 4 4 1 Tetratricopeptide repeat MIT PF04212.18 gi|73670358|ref|YP_306373.1| - 4.4e-05 23.5 23.6 0.88 9.7 0.1 7.7 5 1 3 8 8 8 1 MIT (microtubule interacting and transport) domain SRP_TPR_like PF17004.5 gi|73670358|ref|YP_306373.1| - 5.1e-05 23.3 8.3 0.063 13.3 0.2 3.9 1 1 1 3 3 3 2 Putative TPR-like repeat NARP1 PF12569.8 gi|73670358|ref|YP_306373.1| - 5.5e-05 22.3 8.7 0.0074 15.2 6.2 3.9 1 1 1 2 2 2 1 NMDA receptor-regulated protein 1 ChAPs PF09295.10 gi|73670358|ref|YP_306373.1| - 8e-05 21.8 0.3 0.17 10.9 0.1 2.3 2 0 0 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) DUF627 PF04781.12 gi|73670358|ref|YP_306373.1| - 8.3e-05 22.6 0.3 0.71 9.9 0.0 4.0 4 1 1 5 5 4 1 Protein of unknown function (DUF627) FAT PF02259.23 gi|73670358|ref|YP_306373.1| - 0.00015 21.1 0.8 0.43 9.7 0.1 3.3 1 1 2 3 3 3 2 FAT domain TOM20_plant PF06552.12 gi|73670358|ref|YP_306373.1| - 0.00015 21.5 4.1 0.0073 16.1 0.1 4.3 1 1 2 4 4 4 1 Plant specific mitochondrial import receptor subunit TOM20 TPR_20 PF14561.6 gi|73670358|ref|YP_306373.1| - 0.00026 21.3 2.2 4.3 7.8 0.2 4.2 2 2 2 4 4 4 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|73670358|ref|YP_306373.1| - 0.0019 17.6 10.8 0.32 10.5 0.1 5.2 5 0 0 5 5 5 1 SHNi-TPR UPF0122 PF04297.14 gi|73670358|ref|YP_306373.1| - 0.0024 18.1 1.2 1.5 9.1 0.0 3.6 3 2 1 4 4 3 1 Putative helix-turn-helix protein, YlxM / p13 like DUF4919 PF16266.5 gi|73670358|ref|YP_306373.1| - 0.0026 17.8 0.1 0.026 14.5 0.0 2.5 2 1 1 3 3 3 1 Domain of unknown function (DUF4919) HTH_Bact PF18768.1 gi|73670358|ref|YP_306373.1| - 0.0034 16.9 5.9 46 3.7 0.0 6.9 7 2 1 8 8 8 0 Helix-turn-helix bacterial domain Coatomer_E PF04733.14 gi|73670358|ref|YP_306373.1| - 0.012 15.1 0.7 1.1 8.7 0.1 2.7 3 0 0 3 3 3 0 Coatomer epsilon subunit SNAP PF14938.6 gi|73670358|ref|YP_306373.1| - 0.024 14.1 13.2 0.063 12.7 0.6 4.2 2 2 0 3 3 3 0 Soluble NSF attachment protein, SNAP BTAD PF03704.17 gi|73670358|ref|YP_306373.1| - 0.058 13.8 7.1 2 8.8 0.3 4.4 2 1 3 5 5 4 0 Bacterial transcriptional activator domain DUF2550 PF10739.9 gi|73670358|ref|YP_306373.1| - 0.062 13.3 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2550) HTH_OrfB_IS605 PF12323.8 gi|73670358|ref|YP_306373.1| - 0.063 12.8 0.6 1.3 8.5 0.0 3.2 3 0 0 3 3 2 0 Helix-turn-helix domain DNA_pol_lambd_f PF10391.9 gi|73670358|ref|YP_306373.1| - 0.13 12.2 2.8 48 3.9 0.0 4.6 5 0 0 5 5 4 0 Fingers domain of DNA polymerase lambda RIG-I_C PF18119.1 gi|73670358|ref|YP_306373.1| - 0.13 12.3 1.7 37 4.3 0.0 3.8 3 2 2 5 5 5 0 RIG-I receptor C-terminal domain Sel1 PF08238.12 gi|73670358|ref|YP_306373.1| - 0.48 11.2 3.7 37 5.2 0.2 4.0 4 0 0 4 4 2 0 Sel1 repeat Response_reg PF00072.24 gi|73670359|ref|YP_306374.1| - 4.4e-16 59.0 0.0 5.9e-16 58.6 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain HTH_24 PF13412.6 gi|73670359|ref|YP_306374.1| - 9.4e-07 28.3 0.9 1.7e-06 27.5 0.9 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|73670359|ref|YP_306374.1| - 1.6e-05 24.6 0.2 3.3e-05 23.6 0.2 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|73670359|ref|YP_306374.1| - 5.2e-05 23.1 0.5 0.00015 21.6 0.4 1.8 2 0 0 2 2 2 1 HTH domain HTH_Mga PF08280.11 gi|73670359|ref|YP_306374.1| - 0.0035 17.4 0.7 0.03 14.3 0.3 2.1 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain ACP_syn_III PF08545.10 gi|73670359|ref|YP_306374.1| - 0.055 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Sigma70_r4_2 PF08281.12 gi|73670359|ref|YP_306374.1| - 0.059 13.0 0.4 0.12 12.1 0.2 1.6 1 1 0 1 1 1 0 Sigma-70, region 4 MarR PF01047.22 gi|73670359|ref|YP_306374.1| - 0.077 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 MarR family MarR_2 PF12802.7 gi|73670360|ref|YP_306375.1| - 1.6e-05 24.7 0.0 2.3e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|73670360|ref|YP_306375.1| - 0.00041 20.1 0.0 0.00058 19.6 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|73670360|ref|YP_306375.1| - 0.0018 17.8 0.1 0.0026 17.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|73670360|ref|YP_306375.1| - 0.0026 17.6 0.0 0.0038 17.1 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|73670360|ref|YP_306375.1| - 0.0088 16.0 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|73670360|ref|YP_306375.1| - 0.0098 15.8 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|73670360|ref|YP_306375.1| - 0.016 15.0 0.1 0.022 14.6 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 gi|73670360|ref|YP_306375.1| - 0.02 15.2 0.0 0.027 14.8 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.11 gi|73670360|ref|YP_306375.1| - 0.042 13.9 0.1 0.09 12.9 0.1 1.6 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|73670360|ref|YP_306375.1| - 0.049 13.6 0.0 0.077 13.0 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Phage_rep_O PF04492.13 gi|73670360|ref|YP_306375.1| - 0.098 13.3 0.1 0.13 12.9 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage replication protein O Pyr_redox_2 PF07992.14 gi|73670361|ref|YP_306376.1| - 1.4e-44 152.5 0.9 1.7e-44 152.3 0.9 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|73670361|ref|YP_306376.1| - 1.3e-27 96.9 5.1 7.1e-20 71.5 0.1 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|73670361|ref|YP_306376.1| - 1.7e-15 57.3 3.8 5.5e-13 49.3 0.2 3.3 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|73670361|ref|YP_306376.1| - 1.7e-09 37.6 2.4 8.5e-07 28.7 0.1 3.0 2 1 1 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|73670361|ref|YP_306376.1| - 2.3e-07 29.9 2.9 0.0005 18.9 0.1 3.2 3 0 0 3 3 3 2 HI0933-like protein FAD_binding_2 PF00890.24 gi|73670361|ref|YP_306376.1| - 1e-06 28.1 3.0 1.5e-05 24.3 0.1 3.3 4 1 1 5 5 5 1 FAD binding domain Thi4 PF01946.17 gi|73670361|ref|YP_306376.1| - 4.6e-06 26.0 0.7 0.002 17.4 0.2 2.5 2 0 0 2 2 2 2 Thi4 family NAD_binding_8 PF13450.6 gi|73670361|ref|YP_306376.1| - 9e-06 25.8 1.0 0.00059 20.0 0.1 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|73670361|ref|YP_306376.1| - 2.6e-05 24.0 6.9 0.0063 16.1 1.3 3.3 3 1 0 3 3 3 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|73670361|ref|YP_306376.1| - 3.3e-05 23.3 0.4 0.0031 16.8 0.1 2.3 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 gi|73670361|ref|YP_306376.1| - 5.5e-05 22.4 5.2 0.0017 17.5 0.6 3.2 2 1 1 3 3 3 1 Glucose inhibited division protein A K_oxygenase PF13434.6 gi|73670361|ref|YP_306376.1| - 0.00051 19.3 0.6 0.13 11.3 0.1 2.7 2 1 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) FMO-like PF00743.19 gi|73670361|ref|YP_306376.1| - 0.0028 16.2 0.1 0.017 13.6 0.0 1.9 2 0 0 2 2 2 1 Flavin-binding monooxygenase-like Lycopene_cycl PF05834.12 gi|73670361|ref|YP_306376.1| - 0.014 14.5 3.2 0.15 11.1 0.2 2.7 3 0 0 3 3 3 0 Lycopene cyclase protein MCRA PF06100.11 gi|73670361|ref|YP_306376.1| - 0.024 13.5 0.3 0.18 10.6 0.1 2.0 2 0 0 2 2 2 0 MCRA family Trp_halogenase PF04820.14 gi|73670361|ref|YP_306376.1| - 0.08 11.8 0.7 3.6 6.3 0.0 2.4 2 0 0 2 2 2 0 Tryptophan halogenase AlaDh_PNT_C PF01262.21 gi|73670361|ref|YP_306376.1| - 0.086 12.1 0.7 5.3 6.3 0.2 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 gi|73670361|ref|YP_306376.1| - 0.15 12.5 2.7 0.14 12.6 0.3 2.3 2 2 0 2 2 2 0 Putative NAD(P)-binding NAD_binding_9 PF13454.6 gi|73670361|ref|YP_306376.1| - 1 9.3 4.9 15 5.6 0.1 2.9 3 0 0 3 3 3 0 FAD-NAD(P)-binding Thioredoxin_3 PF13192.6 gi|73670362|ref|YP_306377.1| - 2.9e-07 30.4 0.0 2.9e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin domain DSBA PF01323.20 gi|73670362|ref|YP_306377.1| - 0.0026 17.6 0.0 0.0026 17.6 0.0 1.0 1 0 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 gi|73670362|ref|YP_306377.1| - 0.11 12.6 0.0 0.11 12.6 0.0 1.0 1 0 0 1 1 1 0 Thioredoxin ArsD PF06953.11 gi|73670362|ref|YP_306377.1| - 0.13 12.7 0.0 0.13 12.7 0.0 1.0 1 0 0 1 1 1 0 Arsenical resistance operon trans-acting repressor ArsD TP_methylase PF00590.20 gi|73670363|ref|YP_306378.1| - 5.4e-17 62.5 0.0 6.8e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.13 gi|73670364|ref|YP_306379.1| - 6.3e-31 106.3 2.7 7.2e-31 106.1 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF357) DUF555 PF04475.12 gi|73670365|ref|YP_306380.1| - 4.9e-49 164.8 0.0 6.1e-49 164.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF555) Dodecin PF07311.12 gi|73670365|ref|YP_306380.1| - 0.017 15.3 0.4 1.1 9.5 0.0 2.3 2 0 0 2 2 2 0 Dodecin Rad50_zn_hook PF04423.14 gi|73670365|ref|YP_306380.1| - 0.093 12.6 0.4 0.23 11.3 0.1 1.8 2 0 0 2 2 2 0 Rad50 zinc hook motif Zn-C2H2_12 PF18112.1 gi|73670365|ref|YP_306380.1| - 0.55 10.8 2.7 0.72 10.4 1.2 1.9 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain PfkB PF00294.24 gi|73670366|ref|YP_306381.1| - 1.3e-56 192.2 0.0 1.5e-56 191.9 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HAP2-GCS1 PF10699.9 gi|73670366|ref|YP_306381.1| - 0.077 13.0 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Male gamete fusion factor Diphthami_syn_2 PF01902.17 gi|73670367|ref|YP_306382.1| - 4.7e-75 251.8 0.7 5.3e-75 251.7 0.7 1.0 1 0 0 1 1 1 1 Diphthamide synthase ThiI PF02568.14 gi|73670367|ref|YP_306382.1| - 0.11 12.1 0.1 0.34 10.5 0.0 1.9 3 0 0 3 3 3 0 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|73670367|ref|YP_306382.1| - 0.12 11.8 0.0 0.21 11.0 0.0 1.6 1 1 0 1 1 1 0 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|73670367|ref|YP_306382.1| - 0.13 11.0 0.0 0.33 9.7 0.0 1.6 2 0 0 2 2 2 0 tRNA methyl transferase DUF2465 PF10239.9 gi|73670367|ref|YP_306382.1| - 0.15 11.3 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2465) NTP_transferase PF00483.23 gi|73670368|ref|YP_306383.1| - 4.6e-29 101.7 0.0 5.9e-29 101.4 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|73670368|ref|YP_306383.1| - 1.2e-08 35.5 0.0 2.2e-08 34.6 0.0 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|73670368|ref|YP_306383.1| - 0.015 15.1 0.0 0.026 14.3 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.26 gi|73670368|ref|YP_306383.1| - 0.017 14.9 0.0 0.027 14.3 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 2 Smr PF01713.21 gi|73670368|ref|YP_306383.1| - 0.018 15.4 0.0 0.24 11.8 0.0 2.5 3 0 0 3 3 3 0 Smr domain CTP_transf_3 PF02348.19 gi|73670368|ref|YP_306383.1| - 0.081 12.8 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Cytidylyltransferase Methyltransf_11 PF08241.12 gi|73670369|ref|YP_306384.1| - 1.9e-26 92.5 0.0 3.1e-26 91.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670369|ref|YP_306384.1| - 8.5e-25 87.3 0.0 1.3e-24 86.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73670369|ref|YP_306384.1| - 7e-21 74.6 0.0 9.2e-21 74.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73670369|ref|YP_306384.1| - 3e-16 59.5 0.0 6.3e-16 58.4 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|73670369|ref|YP_306384.1| - 3.4e-14 53.4 0.0 6e-14 52.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73670369|ref|YP_306384.1| - 7.6e-14 51.9 0.0 8.4e-14 51.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73670369|ref|YP_306384.1| - 3e-08 33.4 0.0 4.5e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|73670369|ref|YP_306384.1| - 2.1e-06 27.4 0.0 3.1e-06 26.8 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.12 gi|73670369|ref|YP_306384.1| - 3.6e-06 26.3 0.0 5.3e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase NodS PF05401.11 gi|73670369|ref|YP_306384.1| - 1.6e-05 24.6 0.0 2.8e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) RrnaAD PF00398.20 gi|73670369|ref|YP_306384.1| - 8.6e-05 21.7 0.0 0.00018 20.6 0.0 1.6 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltransf_32 PF13679.6 gi|73670369|ref|YP_306384.1| - 0.00014 21.9 0.0 0.00019 21.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|73670369|ref|YP_306384.1| - 0.0016 17.8 0.0 0.0023 17.3 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain TehB PF03848.14 gi|73670369|ref|YP_306384.1| - 0.0042 16.5 0.0 0.0063 15.9 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB GidB PF02527.15 gi|73670369|ref|YP_306384.1| - 0.0048 16.3 0.0 0.0072 15.7 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_18 PF12847.7 gi|73670369|ref|YP_306384.1| - 0.0051 16.8 0.0 0.0094 15.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|73670369|ref|YP_306384.1| - 0.0089 15.6 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_15 PF09445.10 gi|73670369|ref|YP_306384.1| - 0.01 15.4 0.0 0.018 14.6 0.0 1.5 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase PCMT PF01135.19 gi|73670369|ref|YP_306384.1| - 0.016 15.0 0.0 0.065 13.0 0.0 1.8 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 gi|73670369|ref|YP_306384.1| - 0.021 14.5 0.0 0.042 13.5 0.0 1.5 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 DUF938 PF06080.12 gi|73670369|ref|YP_306384.1| - 0.1 12.3 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Rapsyn_N PF10579.9 gi|73670369|ref|YP_306384.1| - 0.11 12.6 0.1 5.4 7.2 0.0 2.4 2 0 0 2 2 2 0 Rapsyn N-terminal myristoylation and linker region UDPG_MGDP_dh_N PF03721.14 gi|73670369|ref|YP_306384.1| - 0.22 11.1 0.0 0.38 10.3 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PAS_3 PF08447.12 gi|73670370|ref|YP_306385.1| - 8e-37 125.4 0.3 4.8e-20 71.6 0.1 2.4 2 0 0 2 2 2 2 PAS fold HisKA_2 PF07568.12 gi|73670370|ref|YP_306385.1| - 2.6e-29 101.1 3.9 3.2e-28 97.6 4.3 2.4 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.7 gi|73670370|ref|YP_306385.1| - 4.9e-10 39.6 2.0 0.00024 21.3 0.2 3.2 3 0 0 3 3 3 2 PAS domain HATPase_c PF02518.26 gi|73670370|ref|YP_306385.1| - 1.3e-09 38.6 0.1 5.9e-09 36.4 0.1 2.2 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|73670370|ref|YP_306385.1| - 4.3e-05 23.5 0.2 0.0041 17.1 0.0 2.4 2 0 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 gi|73670370|ref|YP_306385.1| - 0.00073 19.5 0.0 0.0014 18.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|73670370|ref|YP_306385.1| - 0.00082 20.0 0.1 0.0036 18.0 0.1 2.1 2 0 0 2 2 2 1 HWE histidine kinase PAS_11 PF14598.6 gi|73670370|ref|YP_306385.1| - 0.0077 16.3 0.0 0.1 12.7 0.0 2.3 2 0 0 2 2 2 1 PAS domain IPPT PF01715.17 gi|73670370|ref|YP_306385.1| - 0.036 13.9 0.0 0.17 11.7 0.0 1.9 1 1 1 2 2 2 0 IPP transferase PAS_4 PF08448.10 gi|73670370|ref|YP_306385.1| - 0.15 12.3 0.0 0.61 10.4 0.0 1.9 2 0 0 2 2 2 0 PAS fold MFS_1 PF07690.16 gi|73670371|ref|YP_306386.1| - 6e-35 120.8 55.0 2.3e-25 89.3 33.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|73670371|ref|YP_306386.1| - 1.1e-10 41.0 40.5 8.2e-07 28.2 12.1 2.9 1 1 2 3 3 3 2 MFS_1 like family Sugar_tr PF00083.24 gi|73670371|ref|YP_306386.1| - 8.1e-06 25.0 10.3 8.1e-06 25.0 10.3 3.3 1 1 1 2 2 2 1 Sugar (and other) transporter MFS_2 PF13347.6 gi|73670371|ref|YP_306386.1| - 3.3e-05 22.6 40.6 5.3e-05 22.0 22.2 2.8 1 1 2 3 3 3 2 MFS/sugar transport protein Peptidase_S55 PF05580.12 gi|73670372|ref|YP_306387.1| - 0.00091 19.2 0.5 0.0015 18.6 0.5 1.2 1 0 0 1 1 1 1 SpoIVB peptidase S55 Trypsin PF00089.26 gi|73670372|ref|YP_306387.1| - 0.00097 19.0 0.2 0.025 14.4 0.1 2.2 1 1 0 2 2 2 1 Trypsin Phage-Gp8 PF09215.10 gi|73670372|ref|YP_306387.1| - 0.047 12.7 0.0 0.053 12.6 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage T4, Gp8 Peptidase_S32 PF05579.13 gi|73670372|ref|YP_306387.1| - 0.065 12.4 0.0 0.12 11.6 0.0 1.7 1 1 0 1 1 1 0 Equine arteritis virus serine endopeptidase S32 Trypsin_2 PF13365.6 gi|73670372|ref|YP_306387.1| - 0.074 13.9 0.2 4.9 8.0 0.1 2.2 1 1 0 2 2 2 0 Trypsin-like peptidase domain PcfJ PF14284.6 gi|73670373|ref|YP_306388.1| - 0.024 14.5 0.2 0.031 14.2 0.2 1.1 1 0 0 1 1 1 0 PcfJ-like protein Peptidase_M14 PF00246.24 gi|73670374|ref|YP_306389.1| - 3.7e-69 233.7 0.2 4.6e-69 233.4 0.2 1.1 1 0 0 1 1 1 1 Zinc carboxypeptidase AAL_decarboxy PF03306.13 gi|73670375|ref|YP_306390.1| - 4.1e-28 98.2 0.1 4.5e-28 98.1 0.1 1.0 1 0 0 1 1 1 1 Alpha-acetolactate decarboxylase Amidase02_C PF12123.8 gi|73670375|ref|YP_306390.1| - 0.13 11.9 0.9 6.7 6.5 0.1 2.3 2 0 0 2 2 2 0 N-acetylmuramoyl-l-alanine amidase AAL_decarboxy PF03306.13 gi|73670376|ref|YP_306391.1| - 2.8e-34 118.4 0.0 3.2e-34 118.2 0.0 1.0 1 0 0 1 1 1 1 Alpha-acetolactate decarboxylase Binary_toxB PF03495.14 gi|73670377|ref|YP_306392.1| - 1.3e-05 25.3 4.0 4.4e-05 23.6 4.0 2.0 1 0 0 1 1 1 1 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain DUF553 PF04473.12 gi|73670377|ref|YP_306392.1| - 1.6e-05 24.5 0.0 3.2e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Transglutaminase-like domain Transglut_core PF01841.19 gi|73670377|ref|YP_306392.1| - 0.002 18.6 0.0 0.004 17.6 0.0 1.5 1 0 0 1 1 1 1 Transglutaminase-like superfamily CARDB PF07705.11 gi|73670377|ref|YP_306392.1| - 0.011 15.9 0.9 0.041 14.1 0.6 2.2 2 0 0 2 2 2 0 CARDB PEGA PF08308.11 gi|73670377|ref|YP_306392.1| - 0.047 13.6 0.1 0.12 12.3 0.1 1.7 1 0 0 1 1 1 0 PEGA domain Transglut_core2 PF13369.6 gi|73670377|ref|YP_306392.1| - 0.13 11.8 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 Transglutaminase-like superfamily PKD PF00801.20 gi|73670378|ref|YP_306393.1| - 1.8e-39 133.4 13.5 2.3e-14 53.0 0.8 3.7 4 0 0 4 4 4 3 PKD domain Beta_helix PF13229.6 gi|73670378|ref|YP_306393.1| - 1.9e-13 50.6 46.9 1.6e-06 28.1 28.7 3.5 2 1 0 2 2 2 2 Right handed beta helix region NosD PF05048.13 gi|73670378|ref|YP_306393.1| - 5.5e-08 32.4 33.0 1.4e-05 24.5 4.3 3.6 2 1 0 2 2 2 2 Periplasmic copper-binding protein (NosD) MG2 PF01835.19 gi|73670378|ref|YP_306393.1| - 0.00016 22.1 3.8 3.7 8.1 0.1 3.7 1 1 2 3 3 3 3 MG2 domain Big_4 PF07532.11 gi|73670378|ref|YP_306393.1| - 0.0038 16.9 4.4 6.1 6.7 0.1 3.8 3 0 0 3 3 3 2 Bacterial Ig-like domain (group 4) DUF3324 PF11797.8 gi|73670378|ref|YP_306393.1| - 0.25 11.3 5.3 4.9 7.1 0.2 3.4 3 0 0 3 3 3 0 Protein of unknown function C-terminal (DUF3324) He_PIG PF05345.12 gi|73670378|ref|YP_306393.1| - 1.2 9.4 13.1 15 5.8 0.1 5.5 4 2 0 4 4 4 0 Putative Ig domain Phage_stabilise PF11134.8 gi|73670379|ref|YP_306394.1| - 0.098 11.5 0.0 0.1 11.5 0.0 1.0 1 0 0 1 1 1 0 Phage stabilisation protein FeThRed_B PF02943.15 gi|73670380|ref|YP_306395.1| - 3.6e-25 88.0 2.3 4.2e-25 87.8 2.3 1.0 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain FeS PF04060.13 gi|73670381|ref|YP_306396.1| - 3.7e-13 48.9 2.1 3.7e-13 48.9 2.1 2.3 2 0 0 2 2 2 1 Putative Fe-S cluster Fer4 PF00037.27 gi|73670381|ref|YP_306396.1| - 2.1e-06 27.3 22.2 9e-06 25.3 3.8 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73670381|ref|YP_306396.1| - 4.2e-05 23.6 14.6 0.00046 20.3 9.7 3.1 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73670381|ref|YP_306396.1| - 0.0001 22.8 16.9 0.0079 16.8 3.1 2.9 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73670381|ref|YP_306396.1| - 0.00029 20.9 12.8 0.0034 17.5 0.9 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73670381|ref|YP_306396.1| - 0.00071 20.3 3.0 0.0087 16.8 0.1 2.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_9 PF13187.6 gi|73670381|ref|YP_306396.1| - 0.0011 19.0 17.1 0.0037 17.4 8.8 3.0 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670381|ref|YP_306396.1| - 0.0013 19.0 1.1 0.0013 19.0 1.1 3.7 3 1 0 3 3 3 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73670381|ref|YP_306396.1| - 0.0016 18.5 2.6 0.0016 18.5 2.6 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73670381|ref|YP_306396.1| - 0.002 18.1 3.5 0.002 18.1 3.5 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73670381|ref|YP_306396.1| - 0.0033 17.8 12.0 0.0063 16.9 5.4 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain YhfH PF14149.6 gi|73670381|ref|YP_306396.1| - 0.0074 16.2 2.5 0.0074 16.2 2.5 2.1 2 0 0 2 2 1 1 YhfH-like protein Fer4_13 PF13370.6 gi|73670381|ref|YP_306396.1| - 0.071 13.7 12.4 0.11 13.0 6.6 3.1 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|73670381|ref|YP_306396.1| - 0.13 13.3 7.4 0.13 13.3 7.4 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73670381|ref|YP_306396.1| - 0.14 12.7 16.0 0.041 14.4 7.3 2.6 2 2 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73670381|ref|YP_306396.1| - 0.17 12.8 19.9 0.16 12.9 2.1 3.1 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|73670381|ref|YP_306396.1| - 1.4 9.2 6.1 3.5 7.9 0.1 2.7 3 0 0 3 3 3 0 4Fe-4S dicluster domain TPP_enzyme_M PF00205.22 gi|73670382|ref|YP_306397.1| - 2.5e-05 24.0 0.0 0.027 14.2 0.0 2.8 2 1 0 2 2 2 2 Thiamine pyrophosphate enzyme, central domain Cas_GSU0053 PF09617.10 gi|73670382|ref|YP_306397.1| - 0.009 16.0 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 1 CRISPR-associated protein GSU0053 (Cas_GSU0053) Molybdopterin PF00384.22 gi|73670382|ref|YP_306397.1| - 0.13 11.2 0.0 0.31 9.9 0.0 1.7 2 0 0 2 2 2 0 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|73670383|ref|YP_306398.1| - 1.3e-13 50.9 0.0 1.8e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain CDC48_N PF02359.18 gi|73670383|ref|YP_306398.1| - 0.0085 16.2 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain RNA_pol_A_CTD PF03118.15 gi|73670384|ref|YP_306399.1| - 0.053 13.3 0.2 0.079 12.7 0.2 1.2 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain Zip PF02535.22 gi|73670385|ref|YP_306400.1| - 4e-19 69.0 14.4 3.1e-14 53.0 6.5 2.1 1 1 1 2 2 2 2 ZIP Zinc transporter DUF456 PF04306.13 gi|73670385|ref|YP_306400.1| - 0.02 15.2 3.1 0.02 15.2 3.1 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF456) EpuA PF11772.8 gi|73670385|ref|YP_306400.1| - 3 7.6 7.5 0.82 9.4 0.2 3.2 3 0 0 3 3 3 0 DNA-directed RNA polymerase subunit beta Ferritin PF00210.24 gi|73670386|ref|YP_306401.1| - 2.3e-22 79.5 0.0 2.9e-22 79.2 0.0 1.1 1 0 0 1 1 1 1 Ferritin-like domain Ferritin_2 PF13668.6 gi|73670386|ref|YP_306401.1| - 0.051 13.8 0.0 0.067 13.4 0.0 1.2 1 0 0 1 1 1 0 Ferritin-like domain COQ7 PF03232.13 gi|73670386|ref|YP_306401.1| - 0.12 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Ubiquinone biosynthesis protein COQ7 Protoglobin PF11563.8 gi|73670387|ref|YP_306402.1| - 8.3e-40 136.3 0.1 9.2e-40 136.1 0.1 1.0 1 0 0 1 1 1 1 Protoglobin Methyltransf_11 PF08241.12 gi|73670388|ref|YP_306403.1| - 3.2e-15 56.5 0.0 7e-15 55.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670388|ref|YP_306403.1| - 7.6e-11 42.6 0.0 1.7e-10 41.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73670388|ref|YP_306403.1| - 6e-10 39.2 0.0 1.3e-09 38.2 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73670388|ref|YP_306403.1| - 2.3e-08 34.7 0.0 9.6e-08 32.7 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73670388|ref|YP_306403.1| - 2.1e-07 30.9 0.1 1.9e-06 27.8 0.0 2.3 1 1 1 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73670388|ref|YP_306403.1| - 7e-07 28.8 0.0 1.1e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_9 PF08003.11 gi|73670388|ref|YP_306403.1| - 0.003 16.5 0.0 0.004 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MetW PF07021.12 gi|73670388|ref|YP_306403.1| - 0.0034 17.0 0.0 0.0058 16.3 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.15 gi|73670388|ref|YP_306403.1| - 0.021 14.7 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase DUF257 PF03192.13 gi|73670388|ref|YP_306403.1| - 0.12 12.2 0.1 0.18 11.6 0.1 1.2 1 0 0 1 1 1 0 Pyrococcus protein of unknown function, DUF257 NosD PF05048.13 gi|73670389|ref|YP_306404.1| - 7e-60 202.3 50.4 1.3e-49 168.7 25.3 2.6 2 1 1 3 3 3 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670389|ref|YP_306404.1| - 5.3e-28 97.9 45.2 5e-16 59.0 16.3 3.2 2 1 1 3 3 3 2 Right handed beta helix region PKD PF00801.20 gi|73670389|ref|YP_306404.1| - 1.8e-09 37.3 1.2 4.3e-09 36.1 1.2 1.6 1 0 0 1 1 1 1 PKD domain PGF-CTERM PF18204.1 gi|73670389|ref|YP_306404.1| - 1.4e-06 28.1 1.5 2.5e-06 27.3 1.5 1.4 1 0 0 1 1 1 1 PGF-CTERM motif PKD_3 PF16820.5 gi|73670389|ref|YP_306404.1| - 0.011 15.4 0.2 0.025 14.3 0.2 1.6 1 0 0 1 1 1 0 PKD-like domain Y_Y_Y PF07495.13 gi|73670389|ref|YP_306404.1| - 0.045 13.7 5.1 0.056 13.4 0.4 3.0 3 0 0 3 3 3 0 Y_Y_Y domain MotB_plug PF13677.6 gi|73670389|ref|YP_306404.1| - 0.062 12.9 0.2 0.15 11.7 0.2 1.6 1 0 0 1 1 1 0 Membrane MotB of proton-channel complex MotA/MotB NosD PF05048.13 gi|73670390|ref|YP_306405.1| - 9.9e-92 306.6 124.4 1.8e-48 164.9 40.6 4.1 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670390|ref|YP_306405.1| - 3.4e-56 189.5 141.7 4.7e-23 81.8 37.2 4.4 2 2 2 4 4 4 4 Right handed beta helix region Pectate_lyase_3 PF12708.7 gi|73670390|ref|YP_306405.1| - 0.0064 16.3 68.0 0.66 9.8 10.0 5.8 1 1 3 5 5 5 4 Pectate lyase superfamily protein NosD PF05048.13 gi|73670391|ref|YP_306406.1| - 1.2e-72 244.1 117.8 4.1e-47 160.5 35.8 4.6 2 1 2 4 4 4 3 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670391|ref|YP_306406.1| - 1.2e-37 129.2 117.2 2.8e-17 63.0 44.4 4.2 2 1 2 4 4 4 3 Right handed beta helix region PKD PF00801.20 gi|73670391|ref|YP_306406.1| - 1.2e-21 76.3 13.1 6.9e-12 45.0 1.7 3.3 3 0 0 3 3 3 2 PKD domain PKD_3 PF16820.5 gi|73670391|ref|YP_306406.1| - 0.04 13.7 0.6 1.2 8.9 0.0 2.6 2 0 0 2 2 2 0 PKD-like domain DUF4871 PF16167.5 gi|73670391|ref|YP_306406.1| - 0.041 13.9 1.1 0.19 11.8 1.1 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) ChitinaseA_N PF08329.10 gi|73670391|ref|YP_306406.1| - 0.12 12.0 5.5 1.3 8.6 0.1 3.9 3 1 0 4 4 4 0 Chitinase A, N-terminal domain DUF5011 PF16403.5 gi|73670391|ref|YP_306406.1| - 0.51 10.5 5.3 8.2 6.6 0.4 3.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5011) He_PIG PF05345.12 gi|73670391|ref|YP_306406.1| - 5.9 7.2 19.0 0.26 11.5 0.2 4.5 4 1 1 5 5 5 0 Putative Ig domain Y_Y_Y PF07495.13 gi|73670391|ref|YP_306406.1| - 8.8 6.4 11.5 6.5 6.8 0.0 4.8 5 0 0 5 5 5 0 Y_Y_Y domain Hist_deacetyl PF00850.19 gi|73670392|ref|YP_306407.1| - 3.7e-62 210.6 0.0 6e-62 209.9 0.0 1.4 1 1 0 1 1 1 1 Histone deacetylase domain Hydantoinase_A PF01968.18 gi|73670393|ref|YP_306408.1| - 3.6e-48 164.3 3.5 6.5e-43 147.1 1.5 2.2 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|73670393|ref|YP_306408.1| - 1.7e-31 109.3 1.9 1.3e-27 96.7 0.4 3.5 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region BcrAD_BadFG PF01869.20 gi|73670393|ref|YP_306408.1| - 2.6e-05 23.9 0.0 0.00045 19.8 0.0 2.6 1 1 2 3 3 3 1 BadF/BadG/BcrA/BcrD ATPase family MutL PF13941.6 gi|73670393|ref|YP_306408.1| - 3.5e-05 22.6 0.9 0.042 12.4 0.0 2.4 2 0 0 2 2 2 2 MutL protein EutA PF06277.11 gi|73670393|ref|YP_306408.1| - 0.0015 17.4 2.5 0.8 8.5 0.1 2.9 3 0 0 3 3 3 2 Ethanolamine utilisation protein EutA Ppx-GppA PF02541.16 gi|73670393|ref|YP_306408.1| - 0.0028 17.2 0.9 0.17 11.3 0.0 2.8 3 0 0 3 3 3 1 Ppx/GppA phosphatase family DDR PF08841.10 gi|73670393|ref|YP_306408.1| - 0.0042 16.1 0.6 0.11 11.4 0.1 2.5 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain FtsA PF14450.6 gi|73670393|ref|YP_306408.1| - 0.0056 17.1 8.0 0.61 10.5 0.2 3.5 3 2 0 3 3 3 2 Cell division protein FtsA StbA PF06406.11 gi|73670393|ref|YP_306408.1| - 0.0088 15.3 0.7 0.69 9.1 0.0 3.1 3 0 0 3 3 3 1 StbA protein MreB_Mbl PF06723.13 gi|73670393|ref|YP_306408.1| - 0.013 14.4 0.1 0.013 14.4 0.1 3.1 4 0 0 4 4 4 0 MreB/Mbl protein ROK PF00480.20 gi|73670393|ref|YP_306408.1| - 1 8.8 3.7 0.44 10.0 0.1 2.3 3 0 0 3 3 3 0 ROK family FmdE PF02663.14 gi|73670394|ref|YP_306409.1| - 1.4e-17 64.0 0.0 2.3e-07 30.9 0.0 3.0 3 0 0 3 3 3 2 FmdE, Molybdenum formylmethanofuran dehydrogenase operon ET PF01684.16 gi|73670394|ref|YP_306409.1| - 0.00065 20.0 0.7 1.9 8.9 0.1 2.6 2 0 0 2 2 2 2 ET module DUF4138 PF13595.6 gi|73670394|ref|YP_306409.1| - 0.043 13.1 1.0 6 6.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4138) Attacin_N PF03768.15 gi|73670394|ref|YP_306409.1| - 0.064 13.4 0.1 23 5.2 0.0 3.0 2 0 0 2 2 2 0 Attacin, N-terminal region DUF1610 PF07754.11 gi|73670394|ref|YP_306409.1| - 0.068 13.2 3.2 9.4 6.3 0.2 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Endonuclease_NS PF01223.23 gi|73670394|ref|YP_306409.1| - 0.16 11.7 3.6 7.5 6.3 0.3 2.3 2 0 0 2 2 2 0 DNA/RNA non-specific endonuclease PAS_3 PF08447.12 gi|73670395|ref|YP_306410.1| - 3.8e-35 120.1 0.8 3.5e-19 68.9 0.3 3.0 3 0 0 3 3 3 2 PAS fold HisKA_2 PF07568.12 gi|73670395|ref|YP_306410.1| - 6.9e-32 109.4 5.3 1.7e-31 108.1 2.9 2.9 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.7 gi|73670395|ref|YP_306410.1| - 2.6e-23 82.3 0.1 1.3e-09 38.2 0.2 4.6 4 0 0 4 4 4 3 PAS domain PAS PF00989.25 gi|73670395|ref|YP_306410.1| - 2.2e-20 72.7 0.0 7.9e-08 32.3 0.0 4.4 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.10 gi|73670395|ref|YP_306410.1| - 3.5e-16 59.4 0.0 4.8e-05 23.6 0.0 4.4 4 0 0 4 4 4 4 PAS fold HATPase_c PF02518.26 gi|73670395|ref|YP_306410.1| - 4.8e-06 27.0 0.0 1.3e-05 25.6 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_3 PF13492.6 gi|73670395|ref|YP_306410.1| - 5e-05 23.6 0.0 0.00012 22.4 0.0 1.7 1 0 0 1 1 1 1 GAF domain PAS_11 PF14598.6 gi|73670395|ref|YP_306410.1| - 5.5e-05 23.3 0.0 0.21 11.7 0.0 3.3 3 0 0 3 3 3 2 PAS domain HWE_HK PF07536.14 gi|73670395|ref|YP_306410.1| - 6.6e-05 23.5 0.3 0.00017 22.2 0.3 1.7 1 0 0 1 1 1 1 HWE histidine kinase GAF_2 PF13185.6 gi|73670395|ref|YP_306410.1| - 0.0045 17.3 0.0 0.017 15.4 0.0 1.9 2 0 0 2 2 2 1 GAF domain PAS_8 PF13188.7 gi|73670395|ref|YP_306410.1| - 0.0069 16.4 0.0 2.6 8.1 0.0 3.5 3 0 0 3 3 3 1 PAS domain GAF PF01590.26 gi|73670395|ref|YP_306410.1| - 0.0095 16.6 0.0 0.02 15.5 0.0 1.6 1 0 0 1 1 1 1 GAF domain FAM165 PF14981.6 gi|73670395|ref|YP_306410.1| - 0.75 9.6 7.3 37 4.2 0.3 3.5 3 0 0 3 3 3 0 FAM165 family Rubredoxin PF00301.20 gi|73670397|ref|YP_306412.1| - 8.4e-20 70.5 5.1 9.2e-20 70.4 5.1 1.0 1 0 0 1 1 1 1 Rubredoxin TF_Zn_Ribbon PF08271.12 gi|73670397|ref|YP_306412.1| - 0.001 18.5 1.1 0.22 11.1 0.0 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding HalOD2 PF18547.1 gi|73670397|ref|YP_306412.1| - 0.0042 16.9 1.5 1.2 9.0 0.4 2.2 2 0 0 2 2 2 2 Halobacterial output domain 2 zf-ribbon_3 PF13248.6 gi|73670397|ref|YP_306412.1| - 0.0071 15.7 4.7 0.43 10.0 1.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|73670397|ref|YP_306412.1| - 0.0081 15.9 9.7 0.26 11.1 1.3 2.3 2 0 0 2 2 2 2 Rubredoxin metal binding domain Mu-like_Com PF10122.9 gi|73670397|ref|YP_306412.1| - 0.013 14.9 2.3 1.1 8.7 1.2 2.2 2 0 0 2 2 2 0 Mu-like prophage protein Com Zn_ribbon_SprT PF17283.2 gi|73670397|ref|YP_306412.1| - 0.019 14.9 4.3 1.5 8.8 0.7 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|73670397|ref|YP_306412.1| - 0.021 14.9 5.8 0.08 13.1 5.8 1.8 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|73670397|ref|YP_306412.1| - 0.025 14.3 5.7 0.53 10.1 1.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.19 gi|73670397|ref|YP_306412.1| - 0.027 14.5 0.7 0.03 14.3 0.7 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 gi|73670397|ref|YP_306412.1| - 0.028 14.3 1.0 3.4 7.6 0.2 2.1 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-RanBP PF00641.18 gi|73670397|ref|YP_306412.1| - 0.034 13.5 1.7 0.034 13.5 1.7 2.0 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-tcix PF14952.6 gi|73670397|ref|YP_306412.1| - 0.054 13.1 5.1 2.6 7.8 0.2 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding TFIIS_C PF01096.18 gi|73670397|ref|YP_306412.1| - 0.054 13.3 4.6 0.72 9.8 0.3 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-NADH-PPase PF09297.11 gi|73670397|ref|YP_306412.1| - 0.07 12.8 4.4 1.1 8.9 1.0 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf_UBZ PF18439.1 gi|73670397|ref|YP_306412.1| - 0.16 11.6 2.2 0.98 9.1 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Mut7-C PF01927.16 gi|73670397|ref|YP_306412.1| - 0.16 12.1 0.1 0.17 11.9 0.1 1.0 1 0 0 1 1 1 0 Mut7-C RNAse domain DUF35_N PF12172.8 gi|73670397|ref|YP_306412.1| - 0.26 11.2 5.9 3.4 7.6 2.1 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-HIT PF04438.16 gi|73670397|ref|YP_306412.1| - 0.27 11.1 8.6 0.64 9.9 1.0 2.2 2 0 0 2 2 2 0 HIT zinc finger RbpA PF13397.6 gi|73670397|ref|YP_306412.1| - 0.28 11.8 0.8 0.33 11.6 0.4 1.4 1 1 0 1 1 1 0 RNA polymerase-binding protein Desulfoferrod_N PF06397.12 gi|73670397|ref|YP_306412.1| - 0.33 10.6 3.9 1.3 8.7 1.1 2.1 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-Mss51 PF13824.6 gi|73670397|ref|YP_306412.1| - 0.56 10.3 6.0 0.92 9.7 1.0 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 PHD_4 PF16866.5 gi|73670397|ref|YP_306412.1| - 0.76 9.9 5.1 1.2 9.2 5.1 1.5 1 1 0 1 1 1 0 PHD-finger zinc_ribbon_10 PF10058.9 gi|73670397|ref|YP_306412.1| - 0.9 9.3 6.6 7.1 6.4 0.8 2.3 2 1 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-C2H2_3 PF13878.6 gi|73670397|ref|YP_306412.1| - 1.2 9.0 6.3 1 9.2 0.7 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-H2C2_2 PF13465.6 gi|73670397|ref|YP_306412.1| - 5.6 7.6 6.9 74 4.0 0.1 3.0 3 0 0 3 3 3 0 Zinc-finger double domain ELFV_dehydrog PF00208.21 gi|73670398|ref|YP_306413.1| - 1.1e-67 228.3 1.0 1.9e-67 227.5 0.7 1.5 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|73670398|ref|YP_306413.1| - 2.4e-53 179.5 0.0 4.7e-53 178.5 0.0 1.5 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|73670398|ref|YP_306413.1| - 0.00058 19.3 0.4 0.0024 17.2 0.0 2.1 2 1 1 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF3579 PF12112.8 gi|73670398|ref|YP_306413.1| - 0.1 13.1 0.1 0.35 11.4 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3579) DDE_Tnp_ISL3 PF01610.17 gi|73670399|ref|YP_306414.1| - 2.3e-60 204.3 2.7 8.2e-60 202.5 1.0 2.0 2 0 0 2 2 2 1 Transposase HTH_Tnp_ISL3 PF13542.6 gi|73670399|ref|YP_306414.1| - 4.5e-11 42.0 0.0 2.6e-10 39.6 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 zf-ISL3 PF14690.6 gi|73670399|ref|YP_306414.1| - 8.6e-11 42.3 5.3 1.8e-10 41.3 5.3 1.6 1 0 0 1 1 1 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF1610 PF07754.11 gi|73670399|ref|YP_306414.1| - 0.069 13.1 0.1 0.14 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1610) DUF4277 PF14104.6 gi|73670400|ref|YP_306415.1| - 4.6e-43 146.0 0.0 9.2e-43 145.0 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|73670400|ref|YP_306415.1| - 1.7e-18 67.1 1.6 7.4e-18 65.0 1.6 1.9 1 1 0 1 1 1 1 Transposase DDE domain Ntox15 PF15604.6 gi|73670400|ref|YP_306415.1| - 2.3 8.3 5.8 0.7 10.0 1.8 2.0 1 1 1 2 2 2 0 Novel toxin 15 TPR_1 PF00515.28 gi|73670401|ref|YP_306416.1| - 1.6e-54 179.6 38.5 4.2e-12 45.3 2.3 6.4 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670401|ref|YP_306416.1| - 1.1e-46 153.2 31.7 6.7e-10 38.3 3.0 6.4 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670401|ref|YP_306416.1| - 1.3e-44 149.6 47.3 1.7e-13 50.0 3.0 6.3 1 1 5 6 6 6 6 TPR repeat TPR_17 PF13431.6 gi|73670401|ref|YP_306416.1| - 1.5e-37 125.2 27.3 3.6e-08 33.3 0.7 5.7 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670401|ref|YP_306416.1| - 5.7e-35 119.7 13.5 5.8e-12 46.1 3.3 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670401|ref|YP_306416.1| - 3.5e-34 114.1 25.7 1.6e-06 27.9 0.5 6.8 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670401|ref|YP_306416.1| - 2.4e-32 111.0 31.7 5.6e-10 39.4 1.0 4.4 1 1 4 5 5 5 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670401|ref|YP_306416.1| - 1.2e-25 88.0 11.0 3.2e-05 24.4 0.5 6.0 1 1 5 6 6 6 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670401|ref|YP_306416.1| - 8.3e-25 87.1 33.4 3.3e-08 33.9 3.9 4.3 1 1 3 5 5 5 4 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670401|ref|YP_306416.1| - 1.5e-16 59.6 16.7 0.0013 18.5 0.4 5.8 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670401|ref|YP_306416.1| - 6.4e-16 58.3 1.4 9.1e-06 25.7 0.5 3.4 1 1 2 4 4 4 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670401|ref|YP_306416.1| - 1.2e-14 54.3 11.9 3.9e-05 23.8 0.6 3.6 2 1 2 4 4 3 3 Anaphase-promoting complex, cyclosome, subunit 3 BTAD PF03704.17 gi|73670401|ref|YP_306416.1| - 1.6e-11 44.8 0.7 0.0041 17.6 0.1 3.2 2 1 1 3 3 3 3 Bacterial transcriptional activator domain TPR_6 PF13174.6 gi|73670401|ref|YP_306416.1| - 1.6e-10 40.9 12.6 0.059 14.0 0.2 5.5 6 0 0 6 6 4 4 Tetratricopeptide repeat DUF3856 PF12968.7 gi|73670401|ref|YP_306416.1| - 2.5e-10 40.6 7.1 0.19 11.8 0.3 5.8 1 1 2 4 4 4 3 Domain of Unknown Function (DUF3856) TPR_4 PF07721.14 gi|73670401|ref|YP_306416.1| - 5.4e-10 38.9 3.1 0.46 11.3 0.1 4.9 5 0 0 5 5 4 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|73670401|ref|YP_306416.1| - 3.7e-09 36.5 13.0 0.091 12.8 0.1 5.9 6 0 0 6 6 6 3 Fis1 C-terminal tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|73670401|ref|YP_306416.1| - 8.8e-09 35.4 0.9 0.042 13.9 0.0 3.8 1 1 3 4 4 4 4 Putative TPR-like repeat TPR_7 PF13176.6 gi|73670401|ref|YP_306416.1| - 4.2e-08 32.7 8.1 0.25 11.5 0.3 5.4 5 1 1 6 6 6 3 Tetratricopeptide repeat HTH_Bact PF18768.1 gi|73670401|ref|YP_306416.1| - 2.6e-07 30.1 9.1 2.8 7.6 0.1 6.2 6 0 0 6 6 6 1 Helix-turn-helix bacterial domain NARP1 PF12569.8 gi|73670401|ref|YP_306416.1| - 5.4e-07 28.9 3.7 0.017 14.1 0.1 3.5 1 1 3 4 4 4 4 NMDA receptor-regulated protein 1 TPR_21 PF09976.9 gi|73670401|ref|YP_306416.1| - 2.9e-05 23.9 11.8 0.095 12.4 0.0 3.8 1 1 3 4 4 4 3 Tetratricopeptide repeat-like domain PPR PF01535.20 gi|73670401|ref|YP_306416.1| - 0.0026 17.9 1.3 34 5.0 0.0 4.9 5 0 0 5 5 4 0 PPR repeat Wzy_C_2 PF11846.8 gi|73670401|ref|YP_306416.1| - 0.01 15.8 19.9 1.5 8.7 0.1 6.2 3 1 5 8 8 7 0 Virulence factor membrane-bound polymerase, C-terminal Pyrid_ox_like PF16242.5 gi|73670401|ref|YP_306416.1| - 0.011 15.4 0.6 15 5.2 0.0 3.6 2 1 2 4 4 4 0 Pyridoxamine 5'-phosphate oxidase like TPR_3 PF07720.12 gi|73670401|ref|YP_306416.1| - 0.011 15.7 20.1 2.2 8.4 0.5 5.6 5 1 1 6 6 6 0 Tetratricopeptide repeat NRBF2_MIT PF17169.4 gi|73670401|ref|YP_306416.1| - 0.013 15.7 4.0 66 3.8 0.0 4.8 1 1 4 5 5 5 0 MIT domain of nuclear receptor-binding factor 2 ANAPC5 PF12862.7 gi|73670401|ref|YP_306416.1| - 0.032 14.3 1.2 48 4.1 0.1 4.4 2 1 3 5 5 3 0 Anaphase-promoting complex subunit 5 Alkyl_sulf_dimr PF14863.6 gi|73670401|ref|YP_306416.1| - 0.038 14.4 0.2 26 5.3 0.0 3.1 1 1 0 3 3 3 0 Alkyl sulfatase dimerisation TPR_15 PF13429.6 gi|73670401|ref|YP_306416.1| - 0.056 12.7 7.5 0.47 9.6 2.1 2.3 1 1 1 2 2 2 0 Tetratricopeptide repeat Yip1 PF04893.17 gi|73670401|ref|YP_306416.1| - 0.22 11.2 18.0 0.035 13.8 4.3 2.5 3 0 0 3 3 2 0 Yip1 domain SHNi-TPR PF10516.9 gi|73670401|ref|YP_306416.1| - 0.42 10.1 4.3 1.1e+02 2.3 0.0 4.7 5 0 0 5 5 5 0 SHNi-TPR FAT PF02259.23 gi|73670401|ref|YP_306416.1| - 0.48 9.6 7.4 11 5.1 0.1 3.6 1 1 2 3 3 3 0 FAT domain MIT PF04212.18 gi|73670401|ref|YP_306416.1| - 1.9 8.6 15.3 15 5.7 0.1 4.7 6 0 0 6 6 4 0 MIT (microtubule interacting and transport) domain ETRAMP PF09716.10 gi|73670401|ref|YP_306416.1| - 2.2 8.4 8.9 1 9.5 1.3 3.3 3 1 0 3 3 2 0 Malarial early transcribed membrane protein (ETRAMP) FAD_binding_3 PF01494.19 gi|73670402|ref|YP_306417.1| - 1.4e-14 54.1 0.6 3.6e-08 33.0 0.0 2.5 2 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|73670402|ref|YP_306417.1| - 2.6e-10 40.2 0.1 3.7e-10 39.7 0.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 gi|73670402|ref|YP_306417.1| - 3.2e-08 33.5 2.4 8.5e-06 25.6 0.7 2.6 2 1 1 3 3 3 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|73670402|ref|YP_306417.1| - 5.3e-08 32.4 0.3 2e-07 30.6 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|73670402|ref|YP_306417.1| - 2.5e-06 26.9 0.0 4.4e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 gi|73670402|ref|YP_306417.1| - 3.1e-05 23.2 0.1 0.014 14.5 0.0 2.2 2 0 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|73670402|ref|YP_306417.1| - 4.9e-05 23.5 0.2 0.00013 22.1 0.2 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|73670402|ref|YP_306417.1| - 8.2e-05 21.5 0.1 0.00014 20.7 0.1 1.3 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 gi|73670402|ref|YP_306417.1| - 0.00043 19.5 0.3 0.00068 18.8 0.3 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|73670402|ref|YP_306417.1| - 0.0071 15.2 0.0 0.69 8.7 0.0 2.8 3 0 0 3 3 3 1 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|73670402|ref|YP_306417.1| - 0.0078 15.3 2.4 0.01 14.9 1.2 1.7 2 0 0 2 2 2 1 FAD binding domain AlaDh_PNT_C PF01262.21 gi|73670402|ref|YP_306417.1| - 0.076 12.3 0.3 0.076 12.3 0.3 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|73670402|ref|YP_306417.1| - 0.13 12.2 0.3 0.23 11.3 0.3 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PAPS_reduct PF01507.19 gi|73670403|ref|YP_306418.1| - 3.2e-38 131.5 0.0 9.8e-38 129.9 0.0 1.9 2 0 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family Fer4_10 PF13237.6 gi|73670403|ref|YP_306418.1| - 2.5e-08 33.9 10.9 2.5e-08 33.9 10.9 2.4 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73670403|ref|YP_306418.1| - 2.5e-07 30.2 2.5 2.5e-07 30.2 2.5 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73670403|ref|YP_306418.1| - 2.1e-06 27.8 9.3 2.1e-06 27.8 9.3 2.7 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73670403|ref|YP_306418.1| - 3.1e-06 27.5 9.1 0.012 16.0 0.2 3.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73670403|ref|YP_306418.1| - 3.6e-05 23.8 12.8 0.0005 20.1 0.2 3.5 4 0 0 4 4 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73670403|ref|YP_306418.1| - 4e-05 23.8 1.7 0.00012 22.2 1.7 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73670403|ref|YP_306418.1| - 7.4e-05 22.7 2.3 7.4e-05 22.7 2.3 3.6 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73670403|ref|YP_306418.1| - 0.00017 22.1 16.3 0.00039 21.0 13.9 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73670403|ref|YP_306418.1| - 0.0002 21.3 2.1 0.0002 21.3 2.1 3.8 3 1 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73670403|ref|YP_306418.1| - 0.0018 19.2 10.9 0.0095 16.9 1.7 4.1 2 1 2 4 4 4 2 4Fe-4S double cluster binding domain ATP_bind_3 PF01171.20 gi|73670403|ref|YP_306418.1| - 0.0053 16.5 0.0 0.0089 15.8 0.0 1.3 1 0 0 1 1 1 1 PP-loop family Fer4_4 PF12800.7 gi|73670403|ref|YP_306418.1| - 0.0073 16.7 3.1 0.0073 16.7 3.1 3.7 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73670403|ref|YP_306418.1| - 0.011 16.3 14.6 0.046 14.3 1.3 3.3 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73670403|ref|YP_306418.1| - 0.023 15.6 7.2 0.023 15.6 7.2 3.3 2 0 0 2 2 2 0 4Fe-4S binding domain PUA PF01472.20 gi|73670403|ref|YP_306418.1| - 0.03 14.3 0.0 0.061 13.3 0.0 1.5 1 0 0 1 1 1 0 PUA domain Fer4_22 PF17179.4 gi|73670403|ref|YP_306418.1| - 0.046 14.6 0.2 0.046 14.6 0.2 3.4 3 1 1 4 4 2 0 4Fe-4S dicluster domain PucR PF07905.11 gi|73670403|ref|YP_306418.1| - 0.16 12.2 0.0 21 5.4 0.0 2.7 2 0 0 2 2 2 0 Purine catabolism regulatory protein-like family Fer4_15 PF13459.6 gi|73670403|ref|YP_306418.1| - 1.1 10.1 6.9 1.6 9.5 0.8 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain Epiglycanin_TR PF05647.11 gi|73670403|ref|YP_306418.1| - 1.2 9.1 3.4 2.6 8.0 3.4 1.5 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like AI-2E_transport PF01594.16 gi|73670404|ref|YP_306419.1| - 3.1e-40 138.3 39.7 3.6e-40 138.1 39.7 1.0 1 0 0 1 1 1 1 AI-2E family transporter PetG PF02529.15 gi|73670404|ref|YP_306419.1| - 0.089 12.7 2.5 4.3 7.3 0.3 3.0 2 0 0 2 2 2 0 Cytochrome B6-F complex subunit 5 tRNA-Thr_ED PF08915.11 gi|73670405|ref|YP_306420.1| - 8.1e-52 174.9 0.4 1.5e-51 174.0 0.4 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|73670405|ref|YP_306420.1| - 2e-17 63.1 1.2 2e-17 63.1 1.2 2.0 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|73670405|ref|YP_306420.1| - 4.3e-16 59.4 0.5 7.3e-16 58.6 0.5 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) PTPlike_phytase PF14566.6 gi|73670405|ref|YP_306420.1| - 0.52 10.4 2.9 43 4.2 0.0 3.7 4 0 0 4 4 4 0 Inositol hexakisphosphate ResIII PF04851.15 gi|73670406|ref|YP_306421.1| - 8e-18 65.0 0.1 1.4e-17 64.3 0.1 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|73670406|ref|YP_306421.1| - 2.2e-07 31.2 0.0 4.2e-06 27.1 0.0 3.0 2 1 0 2 2 2 1 Helicase conserved C-terminal domain SWI2_SNF2 PF18766.1 gi|73670406|ref|YP_306421.1| - 0.0004 20.1 0.0 0.00069 19.4 0.0 1.3 1 0 0 1 1 1 1 SWI2/SNF2 ATPase DEAD PF00270.29 gi|73670406|ref|YP_306421.1| - 0.00042 20.1 0.0 0.0026 17.6 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C_2 PF13307.6 gi|73670406|ref|YP_306421.1| - 0.074 13.2 0.1 3.8 7.6 0.0 3.0 2 1 1 3 3 3 0 Helicase C-terminal domain HD PF01966.22 gi|73670408|ref|YP_306423.1| - 4.8e-12 46.2 0.1 1.5e-11 44.6 0.1 1.9 1 0 0 1 1 1 1 HD domain HAD_2 PF13419.6 gi|73670409|ref|YP_306424.1| - 2.8e-14 53.6 0.0 4.5e-14 52.9 0.0 1.6 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|73670409|ref|YP_306424.1| - 2.3e-07 31.3 0.0 2.6e-06 27.9 0.0 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|73670409|ref|YP_306424.1| - 0.00013 21.9 0.0 0.00021 21.3 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|73670409|ref|YP_306424.1| - 0.085 13.3 0.0 0.13 12.7 0.0 1.4 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|73670409|ref|YP_306424.1| - 0.14 11.5 0.0 0.76 9.1 0.0 1.9 2 0 0 2 2 2 0 Putative Phosphatase PhoU PF01895.19 gi|73670410|ref|YP_306425.1| - 5.2e-24 84.5 9.8 5.5e-20 71.6 3.0 2.6 2 0 0 2 2 2 2 PhoU domain DUF4065 PF13274.6 gi|73670410|ref|YP_306425.1| - 0.79 10.6 3.0 2.8 8.8 1.3 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF4065) DASH_Duo1 PF08651.10 gi|73670410|ref|YP_306425.1| - 3 7.7 7.8 0.6 9.9 0.8 3.2 4 0 0 4 4 4 0 DASH complex subunit Duo1 Pentapeptide PF00805.22 gi|73670411|ref|YP_306426.1| - 5.5e-91 297.5 59.4 6.4e-15 54.5 1.6 7.5 2 1 6 10 10 10 9 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|73670411|ref|YP_306426.1| - 1.7e-33 114.6 0.0 1.2e-09 38.2 0.0 4.3 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|73670411|ref|YP_306426.1| - 5.4e-28 96.9 0.0 1.3e-05 25.2 0.0 5.8 1 1 4 6 6 6 6 Pentapeptide repeats (9 copies) DNA_ligase_OB PF03120.16 gi|73670411|ref|YP_306426.1| - 0.00011 22.0 0.9 9.7 6.2 0.0 5.9 2 1 3 5 5 5 1 NAD-dependent DNA ligase OB-fold domain APH PF01636.23 gi|73670412|ref|YP_306427.1| - 1.8e-13 51.0 0.0 2.4e-13 50.6 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 gi|73670412|ref|YP_306427.1| - 2e-05 24.3 2.2 5.2e-05 22.9 2.2 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase DUF87 PF01935.17 gi|73670412|ref|YP_306427.1| - 0.12 12.5 0.0 0.2 11.7 0.0 1.5 1 1 0 1 1 1 0 Helicase HerA, central domain DUF4131 PF13567.6 gi|73670413|ref|YP_306428.1| - 0.029 14.0 0.4 0.029 14.0 0.4 3.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4131) Fumarate_red_D PF02313.17 gi|73670413|ref|YP_306428.1| - 1.8 8.7 11.2 1.1 9.4 0.7 3.3 3 0 0 3 3 3 0 Fumarate reductase subunit D Zn_protease PF05618.11 gi|73670414|ref|YP_306429.1| - 1.1e-11 44.7 0.1 4.5e-11 42.8 0.1 1.8 1 1 0 1 1 1 1 Putative ATP-dependant zinc protease Pep_deformylase PF01327.21 gi|73670414|ref|YP_306429.1| - 0.0012 18.4 0.7 0.079 12.6 0.7 2.1 1 1 0 1 1 1 1 Polypeptide deformylase zf-ribbon_3 PF13248.6 gi|73670415|ref|YP_306430.1| - 0.0043 16.4 0.1 0.0062 15.9 0.1 1.3 1 0 0 1 1 1 1 zinc-ribbon domain Acetyltransf_4 PF13420.7 gi|73670417|ref|YP_306432.1| - 5.2e-21 75.4 1.5 6.2e-21 75.2 1.5 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|73670417|ref|YP_306432.1| - 5.4e-11 43.3 0.0 6.2e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73670417|ref|YP_306432.1| - 2e-10 40.9 0.1 2.4e-10 40.7 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73670417|ref|YP_306432.1| - 2.1e-06 28.0 0.1 3.5e-06 27.3 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73670417|ref|YP_306432.1| - 2.6e-06 27.4 0.3 3.3e-06 27.1 0.3 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73670417|ref|YP_306432.1| - 0.00059 19.8 0.0 0.00084 19.3 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein CheD PF03975.13 gi|73670417|ref|YP_306432.1| - 0.16 12.1 0.1 0.33 11.1 0.0 1.5 2 0 0 2 2 2 0 CheD chemotactic sensory transduction USP7_ICP0_bdg PF12436.8 gi|73670417|ref|YP_306432.1| - 0.22 10.8 1.7 1.3 8.2 1.0 2.0 1 1 1 2 2 2 0 ICP0-binding domain of Ubiquitin-specific protease 7 LEA_1 PF03760.15 gi|73670418|ref|YP_306433.1| - 4.1 8.1 7.1 0.39 11.4 2.0 1.9 2 0 0 2 2 2 0 Late embryogenesis abundant (LEA) group 1 Fes1 PF08609.10 gi|73670418|ref|YP_306433.1| - 5 8.1 9.6 3.3 8.7 0.1 3.9 3 1 1 4 4 4 0 Nucleotide exchange factor Fes1 HEAT_2 PF13646.6 gi|73670419|ref|YP_306434.1| - 1.9e-34 117.9 11.7 5.2e-07 30.0 0.6 7.8 5 2 4 9 9 9 7 HEAT repeats HEAT PF02985.22 gi|73670419|ref|YP_306434.1| - 1.4e-13 49.8 5.8 2.4 8.6 0.0 11.2 13 0 0 13 13 13 3 HEAT repeat Adaptin_N PF01602.20 gi|73670419|ref|YP_306434.1| - 8.8e-13 47.7 0.6 0.00051 18.7 0.2 4.8 3 2 2 5 5 5 4 Adaptin N terminal region V-ATPase_H_N PF03224.14 gi|73670419|ref|YP_306434.1| - 3.8e-10 39.6 5.7 0.02 14.2 0.1 5.6 2 2 2 6 6 6 4 V-ATPase subunit H Cnd1 PF12717.7 gi|73670419|ref|YP_306434.1| - 9.1e-07 29.1 0.3 1.8 8.6 0.0 5.3 4 3 1 5 5 5 2 non-SMC mitotic condensation complex subunit 1 API5 PF05918.11 gi|73670419|ref|YP_306434.1| - 5.1e-06 25.6 8.0 0.057 12.2 0.3 4.7 3 2 2 5 5 5 2 Apoptosis inhibitory protein 5 (API5) Arm PF00514.23 gi|73670419|ref|YP_306434.1| - 8.3e-06 25.7 10.0 7.7 6.7 0.0 8.5 10 0 0 10 10 10 2 Armadillo/beta-catenin-like repeat CLASP_N PF12348.8 gi|73670419|ref|YP_306434.1| - 2.5e-05 24.0 0.0 3.3 7.2 0.0 4.9 3 2 1 5 5 5 2 CLASP N terminal HEAT_PBS PF03130.16 gi|73670419|ref|YP_306434.1| - 0.036 14.7 1.9 1.3e+02 3.7 0.1 5.8 6 0 0 6 6 5 0 PBS lyase HEAT-like repeat FdsD PF11390.8 gi|73670419|ref|YP_306434.1| - 0.13 12.6 0.0 0.97 9.8 0.0 2.6 2 0 0 2 2 2 0 NADH-dependant formate dehydrogenase delta subunit FdsD Nipped-B_C PF12830.7 gi|73670419|ref|YP_306434.1| - 0.16 11.9 0.0 41 4.0 0.0 4.3 4 1 1 5 5 5 0 Sister chromatid cohesion C-terminus HD PF01966.22 gi|73670420|ref|YP_306435.1| - 7.4e-08 32.6 0.7 1.2e-07 32.0 0.7 1.3 1 0 0 1 1 1 1 HD domain His_Phos_1 PF00300.22 gi|73670421|ref|YP_306436.1| - 6.3e-34 117.4 0.0 4.5e-19 68.9 0.0 2.0 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) DUF4110 PF13422.6 gi|73670421|ref|YP_306436.1| - 0.028 14.5 0.0 0.74 9.9 0.0 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4110) Nitroreductase PF00881.24 gi|73670422|ref|YP_306437.1| - 3.3e-35 121.6 0.0 3.8e-35 121.4 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|73670422|ref|YP_306437.1| - 1.8e-09 37.5 0.0 0.0015 18.2 0.0 2.1 2 0 0 2 2 2 2 Putative TM nitroreductase FeS_assembly_P PF01883.19 gi|73670423|ref|YP_306438.1| - 1.4e-22 79.6 0.1 1.8e-22 79.3 0.1 1.1 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein Fer4_13 PF13370.6 gi|73670424|ref|YP_306439.1| - 1.5e-15 57.4 0.5 1.6e-15 57.4 0.5 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|73670424|ref|YP_306439.1| - 0.0013 19.5 0.2 0.0015 19.2 0.2 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain HTH_5 PF01022.20 gi|73670425|ref|YP_306440.1| - 9.3e-07 28.6 0.9 1.8e-06 27.7 0.4 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73670425|ref|YP_306440.1| - 1.3e-06 28.3 0.1 3.1e-06 27.1 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|73670425|ref|YP_306440.1| - 0.0013 18.7 0.5 0.0031 17.5 0.5 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix Rio2_N PF09202.11 gi|73670425|ref|YP_306440.1| - 0.048 13.9 0.1 0.22 11.8 0.0 2.1 2 0 0 2 2 2 0 Rio2, N-terminal HTH_34 PF13601.6 gi|73670425|ref|YP_306440.1| - 0.084 13.1 0.1 0.26 11.5 0.1 1.8 1 0 0 1 1 1 0 Winged helix DNA-binding domain Asp-B-Hydro_N PF05279.11 gi|73670425|ref|YP_306440.1| - 0.44 10.6 8.1 1.9 8.5 8.1 1.8 1 1 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DUF1825 PF08855.10 gi|73670425|ref|YP_306440.1| - 2.2 8.3 9.4 1.6 8.7 0.7 3.1 1 1 1 3 3 3 0 Domain of unknown function (DUF1825) CoA_binding_2 PF13380.6 gi|73670427|ref|YP_306442.1| - 0.00018 22.0 0.0 0.00021 21.7 0.0 1.1 1 0 0 1 1 1 1 CoA binding domain Inhibitor_I66 PF16850.5 gi|73670427|ref|YP_306442.1| - 0.0028 17.5 0.0 0.0037 17.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase inhibitor I66 YcaO PF02624.16 gi|73670427|ref|YP_306442.1| - 0.15 11.3 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 YcaO cyclodehydratase, ATP-ad Mg2+-binding Glyco_hydro_129 PF11308.8 gi|73670427|ref|YP_306442.1| - 0.15 11.2 0.1 6.5 5.8 0.0 2.1 2 0 0 2 2 2 0 Glycosyl hydrolases related to GH101 family, GH129 TPR_12 PF13424.6 gi|73670428|ref|YP_306443.1| - 3.4e-88 290.0 8.9 8.8e-24 83.6 0.1 5.6 4 1 0 5 5 5 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670428|ref|YP_306443.1| - 3.2e-80 262.1 8.5 3.6e-12 45.7 0.1 8.8 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670428|ref|YP_306443.1| - 2.4e-54 177.5 8.2 2.4e-07 30.3 0.0 9.7 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73670428|ref|YP_306443.1| - 7.8e-54 177.4 20.7 3.1e-07 29.9 0.1 8.4 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670428|ref|YP_306443.1| - 8.2e-44 144.2 22.0 9.1e-07 28.5 0.5 8.3 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670428|ref|YP_306443.1| - 1.6e-37 124.6 22.5 0.00032 20.7 0.2 8.6 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670428|ref|YP_306443.1| - 7.2e-19 67.2 17.4 0.00057 19.5 0.1 8.1 7 2 2 9 9 9 5 TPR repeat TPR_14 PF13428.6 gi|73670428|ref|YP_306443.1| - 1.3e-18 66.1 6.7 0.39 11.7 0.0 8.1 5 3 3 8 8 7 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670428|ref|YP_306443.1| - 5.8e-18 65.3 3.9 0.00023 21.7 0.0 6.5 5 2 0 6 6 5 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670428|ref|YP_306443.1| - 2.1e-15 56.9 8.0 0.12 12.9 0.6 6.7 3 2 2 6 6 6 5 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73670428|ref|YP_306443.1| - 2e-14 53.8 0.1 2.5e-05 23.8 0.3 3.2 1 1 2 3 3 3 3 MalT-like TPR region TPR_17 PF13431.6 gi|73670428|ref|YP_306443.1| - 7e-14 51.1 10.1 0.042 14.2 0.0 9.3 10 1 0 10 10 8 2 Tetratricopeptide repeat MIT PF04212.18 gi|73670428|ref|YP_306443.1| - 1.9e-12 47.1 7.2 0.12 12.4 0.0 8.1 5 1 3 8 8 8 2 MIT (microtubule interacting and transport) domain SNAP PF14938.6 gi|73670428|ref|YP_306443.1| - 1.1e-11 44.7 0.0 0.0022 17.5 0.0 3.4 3 0 0 3 3 3 3 Soluble NSF attachment protein, SNAP SHNi-TPR PF10516.9 gi|73670428|ref|YP_306443.1| - 2.4e-07 30.1 5.6 4.7 6.8 0.0 7.8 9 0 0 9 9 8 1 SHNi-TPR DUF2225 PF09986.9 gi|73670428|ref|YP_306443.1| - 2.7e-07 30.5 1.7 0.13 11.9 0.0 4.3 1 1 3 4 4 4 3 Uncharacterized protein conserved in bacteria (DUF2225) TPR_6 PF13174.6 gi|73670428|ref|YP_306443.1| - 1.1e-06 28.8 17.2 13 6.7 0.0 8.5 8 1 0 8 8 8 0 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670428|ref|YP_306443.1| - 6.6e-06 26.3 2.2 5.8 7.2 0.2 5.1 3 2 3 6 6 5 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 gi|73670428|ref|YP_306443.1| - 9.2e-06 25.1 1.7 1.8 7.7 0.1 5.4 5 1 0 5 5 5 1 Tetratricopeptide repeat TPR_5 PF12688.7 gi|73670428|ref|YP_306443.1| - 5.3e-05 23.4 2.1 4.1 7.7 0.0 5.4 4 2 0 4 4 4 1 Tetratrico peptide repeat 14-3-3 PF00244.20 gi|73670428|ref|YP_306443.1| - 7.5e-05 22.3 6.2 0.12 11.8 0.0 4.6 3 1 3 6 6 6 1 14-3-3 protein TPR_3 PF07720.12 gi|73670428|ref|YP_306443.1| - 0.00014 21.8 2.2 8.9 6.4 0.0 5.3 5 0 0 5 5 5 0 Tetratricopeptide repeat PPR PF01535.20 gi|73670428|ref|YP_306443.1| - 0.00014 21.8 7.9 0.61 10.5 0.0 6.7 7 0 0 7 7 6 1 PPR repeat RPN7 PF10602.9 gi|73670428|ref|YP_306443.1| - 0.00031 20.5 6.5 24 4.6 0.0 6.1 2 2 2 6 6 6 0 26S proteasome subunit RPN7 TPR_20 PF14561.6 gi|73670428|ref|YP_306443.1| - 0.00062 20.0 1.0 11 6.4 0.0 5.1 4 2 1 5 5 4 0 Tetratricopeptide repeat Sel1 PF08238.12 gi|73670428|ref|YP_306443.1| - 0.00085 19.9 6.9 1.4 9.7 0.1 5.8 7 0 0 7 7 4 1 Sel1 repeat TPR_21 PF09976.9 gi|73670428|ref|YP_306443.1| - 0.00086 19.1 0.3 1.5 8.5 0.0 3.6 3 1 1 4 4 4 1 Tetratricopeptide repeat-like domain TPR_9 PF13371.6 gi|73670428|ref|YP_306443.1| - 0.0017 18.4 1.9 5.4 7.2 0.0 5.3 3 3 2 5 5 5 0 Tetratricopeptide repeat HHH_8 PF14716.6 gi|73670428|ref|YP_306443.1| - 0.011 16.1 0.4 32 5.0 0.0 4.4 4 0 0 4 4 4 0 Helix-hairpin-helix domain TPR_4 PF07721.14 gi|73670428|ref|YP_306443.1| - 0.011 16.3 0.0 39 5.3 0.0 5.3 6 0 0 6 6 4 0 Tetratricopeptide repeat RNA_pol_Rpb6 PF01192.22 gi|73670428|ref|YP_306443.1| - 0.023 14.6 1.9 0.97 9.4 0.0 3.9 4 1 0 4 4 3 0 RNA polymerase Rpb6 Coatomer_E PF04733.14 gi|73670428|ref|YP_306443.1| - 0.028 13.8 0.6 27 4.0 0.0 4.2 1 1 2 4 4 4 0 Coatomer epsilon subunit TAtT PF16811.5 gi|73670428|ref|YP_306443.1| - 0.038 13.3 0.2 2.3 7.4 0.0 3.5 2 1 2 4 4 4 0 TRAP transporter T-component Arm_3 PF16186.5 gi|73670428|ref|YP_306443.1| - 0.12 12.0 0.5 9 5.9 0.0 3.4 4 0 0 4 4 2 0 Atypical Arm repeat TetR_C_19 PF17924.1 gi|73670428|ref|YP_306443.1| - 0.15 12.7 0.8 23 5.6 0.0 4.0 4 0 0 4 4 3 0 Tetracyclin repressor-like, C-terminal domain SPO22 PF08631.10 gi|73670428|ref|YP_306443.1| - 0.17 11.3 0.5 73 2.7 0.1 3.6 2 1 0 4 4 4 0 Meiosis protein SPO22/ZIP4 like RPN6_N PF18055.1 gi|73670428|ref|YP_306443.1| - 0.52 10.7 4.4 17 5.8 0.1 3.9 3 2 1 4 4 3 0 26S proteasome regulatory subunit RPN6 N-terminal domain Exo_endo_phos PF03372.23 gi|73670429|ref|YP_306444.1| - 2.7e-10 40.1 0.0 3.6e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|73670429|ref|YP_306444.1| - 0.0013 18.6 0.4 0.0043 16.9 0.4 1.9 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase ABC_tran PF00005.27 gi|73670431|ref|YP_306446.1| - 1.3e-32 113.1 0.0 2.4e-32 112.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 gi|73670431|ref|YP_306446.1| - 3e-11 43.5 18.8 4.6e-11 42.9 18.8 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 gi|73670431|ref|YP_306446.1| - 1.5e-07 31.1 3.8 1.7e-06 27.7 0.2 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|73670431|ref|YP_306446.1| - 0.0028 17.6 0.0 0.0059 16.5 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase ResIII PF04851.15 gi|73670431|ref|YP_306446.1| - 0.006 16.6 0.2 0.015 15.3 0.1 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_29 PF13555.6 gi|73670431|ref|YP_306446.1| - 0.0077 15.9 0.1 0.02 14.6 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|73670431|ref|YP_306446.1| - 0.014 15.6 0.2 0.11 12.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|73670431|ref|YP_306446.1| - 0.02 14.4 0.1 0.17 11.4 0.0 2.1 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_23 PF13476.6 gi|73670431|ref|YP_306446.1| - 0.047 14.2 0.1 0.08 13.4 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|73670431|ref|YP_306446.1| - 0.091 13.2 1.4 1 9.8 1.4 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|73670431|ref|YP_306446.1| - 0.1 13.1 0.0 0.22 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|73670431|ref|YP_306446.1| - 0.16 12.4 0.0 0.32 11.4 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.6 gi|73670431|ref|YP_306446.1| - 0.17 12.2 0.6 1.3 9.3 0.2 2.6 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit HTH_23 PF13384.6 gi|73670432|ref|YP_306447.1| - 0.1 12.4 0.0 0.22 11.4 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain Polysacc_synt_3 PF13440.6 gi|73670433|ref|YP_306448.1| - 2.1e-21 76.4 11.2 2.1e-21 76.4 11.2 2.3 3 0 0 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|73670433|ref|YP_306448.1| - 2e-10 40.5 20.7 2e-10 40.5 20.7 2.4 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein MurJ PF03023.14 gi|73670433|ref|YP_306448.1| - 2.2e-08 33.1 13.4 2.2e-08 33.1 13.4 2.7 3 0 0 3 3 3 2 Lipid II flippase MurJ DUF1673 PF07895.11 gi|73670433|ref|YP_306448.1| - 0.00015 21.6 8.7 0.00015 21.6 8.7 4.0 2 2 1 3 3 3 1 Protein of unknown function (DUF1673) Isochorismatase PF00857.20 gi|73670434|ref|YP_306449.1| - 4.5e-15 56.3 0.1 4.1e-09 36.8 0.0 3.0 2 1 1 3 3 3 3 Isochorismatase family Endonuclease_NS PF01223.23 gi|73670435|ref|YP_306450.1| - 2.8e-53 181.1 0.1 3.7e-53 180.7 0.1 1.2 1 0 0 1 1 1 1 DNA/RNA non-specific endonuclease Trypsin_2 PF13365.6 gi|73670435|ref|YP_306450.1| - 4.6e-20 73.0 0.0 7.6e-20 72.3 0.0 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 gi|73670435|ref|YP_306450.1| - 0.0032 17.3 0.0 0.17 11.7 0.0 2.4 2 1 0 2 2 2 1 Trypsin Peptidase_S32 PF05579.13 gi|73670435|ref|YP_306450.1| - 0.023 13.9 0.0 0.38 9.9 0.0 2.1 2 0 0 2 2 2 0 Equine arteritis virus serine endopeptidase S32 Endonuclea_NS_2 PF13930.6 gi|73670435|ref|YP_306450.1| - 0.024 14.8 0.0 0.047 13.8 0.0 1.5 1 0 0 1 1 1 0 DNA/RNA non-specific endonuclease Peptidase_S7 PF00949.21 gi|73670435|ref|YP_306450.1| - 0.059 13.2 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease Methyltransf_25 PF13649.6 gi|73670436|ref|YP_306451.1| - 6.5e-16 58.8 0.0 9.6e-16 58.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73670436|ref|YP_306451.1| - 1.4e-14 54.4 0.0 2.2e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73670436|ref|YP_306451.1| - 1.2e-09 38.1 0.0 1.6e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73670436|ref|YP_306451.1| - 1.8e-07 30.8 0.0 2.5e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|73670436|ref|YP_306451.1| - 1.3e-06 29.1 0.0 2.2e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73670436|ref|YP_306451.1| - 2.4e-06 27.2 0.0 3.9e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|73670436|ref|YP_306451.1| - 1.2e-05 25.2 0.0 1.6e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|73670436|ref|YP_306451.1| - 1.3e-05 25.1 0.0 2.5e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|73670436|ref|YP_306451.1| - 0.00025 20.5 0.0 0.00041 19.9 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase CMAS PF02353.20 gi|73670436|ref|YP_306451.1| - 0.0003 20.2 0.0 0.00037 19.9 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|73670436|ref|YP_306451.1| - 0.0014 18.1 0.0 0.0018 17.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 gi|73670436|ref|YP_306451.1| - 0.0014 18.5 0.0 0.002 17.9 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_24 PF13578.6 gi|73670436|ref|YP_306451.1| - 0.002 19.1 0.0 0.0033 18.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_PK PF05891.12 gi|73670436|ref|YP_306451.1| - 0.0022 17.5 0.0 0.0035 16.9 0.0 1.3 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase RrnaAD PF00398.20 gi|73670436|ref|YP_306451.1| - 0.0036 16.4 0.0 0.0049 16.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_15 PF09445.10 gi|73670436|ref|YP_306451.1| - 0.0082 15.7 0.1 0.012 15.2 0.1 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_16 PF10294.9 gi|73670436|ref|YP_306451.1| - 0.012 15.3 0.0 0.02 14.6 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Methyltr_RsmB-F PF01189.17 gi|73670436|ref|YP_306451.1| - 0.014 15.1 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F TehB PF03848.14 gi|73670436|ref|YP_306451.1| - 0.014 14.8 0.0 0.023 14.1 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB UPF0020 PF01170.18 gi|73670436|ref|YP_306451.1| - 0.064 12.9 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 FmrO PF07091.11 gi|73670436|ref|YP_306451.1| - 0.096 12.2 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) GidB PF02527.15 gi|73670436|ref|YP_306451.1| - 0.12 11.7 0.0 0.2 10.9 0.0 1.4 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G DUF938 PF06080.12 gi|73670436|ref|YP_306451.1| - 0.17 11.6 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) DUF885 PF05960.11 gi|73670437|ref|YP_306452.1| - 5.9e-09 36.1 0.0 1.7e-08 34.6 0.0 1.8 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF885) DUF1664 PF07889.12 gi|73670437|ref|YP_306452.1| - 0.055 13.5 0.7 20 5.2 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) SAS-6_N PF16531.5 gi|73670437|ref|YP_306452.1| - 0.14 12.7 0.0 0.53 10.9 0.0 2.0 1 0 0 1 1 1 0 Centriolar protein SAS N-terminal Peptidase_C69 PF03577.15 gi|73670438|ref|YP_306453.1| - 7.3e-50 170.0 0.1 5.1e-41 140.9 0.0 2.2 2 0 0 2 2 2 2 Peptidase family C69 HDC PF02329.16 gi|73670439|ref|YP_306454.1| - 1e-86 290.6 0.0 3.1e-86 289.1 0.0 1.6 1 1 0 1 1 1 1 Histidine carboxylase PI chain Peptidase_M3 PF01432.20 gi|73670440|ref|YP_306455.1| - 4.3e-29 102.1 8.5 8.1e-29 101.2 8.5 1.5 1 1 0 1 1 1 1 Peptidase family M3 Peptidase_M50B PF13398.6 gi|73670440|ref|YP_306455.1| - 0.046 13.4 0.0 0.077 12.6 0.0 1.3 1 0 0 1 1 1 0 Peptidase M50B-like Peptidase_M3_N PF08439.10 gi|73670440|ref|YP_306455.1| - 0.74 10.1 5.6 0.48 10.7 0.1 3.3 4 0 0 4 4 4 0 Oligopeptidase F MS_channel PF00924.18 gi|73670441|ref|YP_306456.1| - 1.2e-54 185.0 4.3 1.7e-54 184.5 4.3 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF432 PF04254.13 gi|73670442|ref|YP_306457.1| - 1.1e-40 138.6 0.0 2e-40 137.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF432) CorA PF01544.18 gi|73670443|ref|YP_306458.1| - 2.6e-73 246.9 4.7 3.8e-73 246.3 4.7 1.1 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein YrhC PF14143.6 gi|73670443|ref|YP_306458.1| - 2.3 8.4 6.1 1.3 9.2 3.1 2.1 2 0 0 2 2 2 0 YrhC-like protein TM_helix PF05552.12 gi|73670444|ref|YP_306459.1| - 3e-25 88.0 33.2 4.8e-11 42.5 1.6 4.4 5 0 0 5 5 5 3 Conserved TM helix DUF1980 PF09323.10 gi|73670444|ref|YP_306459.1| - 1 9.3 10.1 0.067 13.1 4.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) MS_channel PF00924.18 gi|73670445|ref|YP_306460.1| - 2.3e-43 148.2 1.0 3.1e-43 147.7 1.0 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel AMP-binding_C_2 PF14535.6 gi|73670446|ref|YP_306461.1| - 5.8e-25 87.4 0.7 4.7e-24 84.5 0.3 2.3 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|73670446|ref|YP_306461.1| - 5.5e-08 31.8 0.0 9.4e-08 31.1 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme GH3 PF03321.13 gi|73670446|ref|YP_306461.1| - 0.00072 18.5 0.0 0.0029 16.5 0.0 1.8 2 0 0 2 2 2 1 GH3 auxin-responsive promoter POR PF01558.18 gi|73670447|ref|YP_306462.1| - 4.1e-39 134.5 0.0 5.1e-39 134.2 0.0 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|73670448|ref|YP_306463.1| - 6.7e-27 94.2 0.5 1.2e-26 93.4 0.5 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|73670448|ref|YP_306463.1| - 5.4e-17 62.3 0.1 1.1e-16 61.3 0.1 1.5 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|73670448|ref|YP_306463.1| - 3.8e-07 29.6 22.2 6e-05 22.7 6.7 3.3 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73670448|ref|YP_306463.1| - 9e-07 28.7 15.6 0.003 17.6 3.4 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73670448|ref|YP_306463.1| - 1.5e-05 24.8 17.1 0.00083 19.3 1.4 3.3 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73670448|ref|YP_306463.1| - 1.8e-05 24.8 14.7 0.00022 21.3 12.9 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Transket_pyr PF02779.24 gi|73670448|ref|YP_306463.1| - 4.5e-05 23.2 0.1 0.037 13.7 0.0 2.5 2 1 0 2 2 2 2 Transketolase, pyrimidine binding domain Fer4_7 PF12838.7 gi|73670448|ref|YP_306463.1| - 0.00035 21.1 12.5 0.011 16.3 1.2 2.8 3 0 0 3 3 2 2 4Fe-4S dicluster domain PFOR_II PF17147.4 gi|73670448|ref|YP_306463.1| - 0.00039 20.7 0.0 0.00095 19.4 0.0 1.7 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|73670448|ref|YP_306463.1| - 0.00048 19.8 0.5 0.0017 18.0 0.3 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_10 PF13237.6 gi|73670448|ref|YP_306463.1| - 0.0005 20.1 10.8 0.0005 20.1 10.8 2.5 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73670448|ref|YP_306463.1| - 0.0015 18.6 9.2 0.0015 18.6 9.2 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670448|ref|YP_306463.1| - 0.16 12.5 17.9 0.14 12.7 3.8 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73670448|ref|YP_306463.1| - 0.29 11.6 11.8 4.3 7.9 4.0 2.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73670448|ref|YP_306463.1| - 0.9 10.3 10.9 2.6 8.9 1.6 3.2 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|73670448|ref|YP_306463.1| - 1.2 9.8 14.4 1.2 9.7 3.2 2.8 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73670448|ref|YP_306463.1| - 1.7 9.8 13.8 0.32 12.0 4.6 3.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73670448|ref|YP_306463.1| - 2.2 9.3 14.2 1.2 10.1 5.5 2.8 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|73670448|ref|YP_306463.1| - 2.3 8.8 11.4 1.2 9.7 2.6 3.4 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|73670448|ref|YP_306463.1| - 10 7.1 12.5 4.1 8.3 1.4 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain GATase PF00117.28 gi|73670449|ref|YP_306464.1| - 1.8e-21 76.8 0.0 2.3e-21 76.4 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|73670449|ref|YP_306464.1| - 6.7e-07 29.3 0.0 7.5e-06 25.9 0.0 2.1 2 0 0 2 2 2 1 Peptidase C26 DJ-1_PfpI PF01965.24 gi|73670449|ref|YP_306464.1| - 1.5e-05 24.9 0.0 2.3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.14 gi|73670449|ref|YP_306464.1| - 1.5e-05 24.7 0.0 2e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain HTS PF04204.16 gi|73670449|ref|YP_306464.1| - 0.0011 18.0 0.0 0.0013 17.8 0.0 1.2 1 0 0 1 1 1 1 Homoserine O-succinyltransferase FtsX PF02687.21 gi|73670450|ref|YP_306465.1| - 0.35 11.4 8.1 0.52 10.8 8.1 1.3 1 1 0 1 1 1 0 FtsX-like permease family Sigma_reg_N PF13800.6 gi|73670450|ref|YP_306465.1| - 3.1 8.1 7.5 1.5 9.2 0.7 2.1 1 1 1 2 2 2 0 Sigma factor regulator N-terminal DUF2178 PF09946.9 gi|73670451|ref|YP_306466.1| - 0.0033 17.6 2.8 0.012 15.7 2.9 2.0 1 1 0 1 1 1 1 Predicted membrane protein (DUF2178) SCAMP PF04144.13 gi|73670451|ref|YP_306466.1| - 0.041 14.2 6.2 1.4 9.2 0.3 2.1 2 0 0 2 2 2 0 SCAMP family VirB3 PF05101.13 gi|73670451|ref|YP_306466.1| - 2.6 8.3 5.7 8 6.8 2.4 2.1 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein HTH_3 PF01381.22 gi|73670452|ref|YP_306467.1| - 3.4e-19 68.6 0.5 3.8e-19 68.5 0.5 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|73670452|ref|YP_306467.1| - 6.2e-11 42.5 0.0 7.4e-11 42.2 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|73670452|ref|YP_306467.1| - 2e-10 40.5 1.6 2.4e-10 40.3 1.6 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|73670452|ref|YP_306467.1| - 5.8e-08 33.1 0.0 7.9e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_11 PF08279.12 gi|73670452|ref|YP_306467.1| - 3.6e-06 26.8 0.3 9.6e-06 25.5 0.2 1.6 2 0 0 2 2 2 1 HTH domain HTH_25 PF13413.6 gi|73670452|ref|YP_306467.1| - 8.5e-05 22.3 0.2 0.00012 21.9 0.2 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|73670452|ref|YP_306467.1| - 0.00052 19.5 0.1 0.00083 18.9 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|73670452|ref|YP_306467.1| - 0.0019 18.1 0.0 0.0048 16.8 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_DeoR PF08220.12 gi|73670452|ref|YP_306467.1| - 0.0058 16.4 0.0 0.0084 15.8 0.0 1.2 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_23 PF13384.6 gi|73670452|ref|YP_306467.1| - 0.0066 16.2 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|73670452|ref|YP_306467.1| - 0.016 14.9 0.2 0.24 11.1 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 YdaS_antitoxin PF15943.5 gi|73670452|ref|YP_306467.1| - 0.028 14.3 0.0 0.031 14.1 0.0 1.3 1 1 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Phage_CI_repr PF07022.13 gi|73670452|ref|YP_306467.1| - 0.038 14.1 0.0 0.038 14.1 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Sigma70_r4 PF04545.16 gi|73670452|ref|YP_306467.1| - 0.041 13.4 0.7 0.078 12.5 0.2 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|73670452|ref|YP_306467.1| - 0.053 13.5 0.0 0.32 11.0 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_37 PF13744.6 gi|73670452|ref|YP_306467.1| - 0.058 13.4 0.1 0.083 12.8 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|73670452|ref|YP_306467.1| - 0.068 13.3 0.3 0.16 12.0 0.1 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase GntR PF00392.21 gi|73670452|ref|YP_306467.1| - 0.079 12.6 0.1 0.14 11.8 0.1 1.5 1 1 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_AsnC-type PF13404.6 gi|73670452|ref|YP_306467.1| - 0.092 12.6 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain TPR_1 PF00515.28 gi|73670453|ref|YP_306468.1| - 1.2e-41 138.8 1.8 6.9e-09 35.2 0.0 6.8 6 1 1 7 7 7 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670453|ref|YP_306468.1| - 1.7e-37 124.5 8.7 1.6e-06 27.7 0.0 6.6 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670453|ref|YP_306468.1| - 6e-29 97.8 3.7 4.9e-06 26.3 0.0 6.4 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670453|ref|YP_306468.1| - 6.6e-28 96.1 6.1 7.7e-06 25.5 0.0 7.3 2 1 5 7 7 7 6 TPR repeat TPR_17 PF13431.6 gi|73670453|ref|YP_306468.1| - 3.3e-26 89.7 0.0 0.0042 17.4 0.0 7.4 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670453|ref|YP_306468.1| - 5e-25 87.6 10.6 9.1e-08 32.3 0.3 4.9 2 2 2 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670453|ref|YP_306468.1| - 5.7e-24 82.8 16.3 1.7e-05 25.3 0.1 7.2 1 1 6 7 7 7 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670453|ref|YP_306468.1| - 7.1e-22 77.8 7.5 1.9e-08 34.8 1.2 4.2 2 2 1 4 4 4 4 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670453|ref|YP_306468.1| - 2.8e-19 69.0 8.1 4.2e-07 30.0 0.1 4.1 1 1 2 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670453|ref|YP_306468.1| - 1.1e-18 67.5 8.7 1.1e-05 25.8 0.5 4.4 1 1 1 4 4 4 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670453|ref|YP_306468.1| - 1.5e-13 49.7 3.3 0.032 14.2 0.0 5.9 6 1 1 7 7 6 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73670453|ref|YP_306468.1| - 1.9e-13 50.1 3.8 0.035 14.8 0.0 6.2 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670453|ref|YP_306468.1| - 4.1e-12 45.5 12.0 0.055 13.4 0.0 6.7 6 1 1 7 7 7 3 Tetratricopeptide repeat BTAD PF03704.17 gi|73670453|ref|YP_306468.1| - 5.1e-11 43.2 4.3 2.2e-06 28.1 0.2 2.7 2 1 0 2 2 2 2 Bacterial transcriptional activator domain ANAPC3 PF12895.7 gi|73670453|ref|YP_306468.1| - 1.9e-10 40.8 1.3 3.7e-06 27.1 0.1 3.2 2 1 1 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 gi|73670453|ref|YP_306468.1| - 2.4e-09 37.1 3.2 1.2 9.2 0.0 5.9 6 0 0 6 6 6 3 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.8 gi|73670453|ref|YP_306468.1| - 3.9e-07 29.4 10.5 0.022 13.7 0.1 4.8 2 1 2 5 5 5 3 NMDA receptor-regulated protein 1 TPR_15 PF13429.6 gi|73670453|ref|YP_306468.1| - 1.4e-06 27.8 2.7 0.002 17.4 0.6 2.6 1 1 2 3 3 3 3 Tetratricopeptide repeat DUF3856 PF12968.7 gi|73670453|ref|YP_306468.1| - 1.1e-05 25.5 2.9 4.6 7.3 0.1 5.1 1 1 2 4 4 4 1 Domain of Unknown Function (DUF3856) TPR_4 PF07721.14 gi|73670453|ref|YP_306468.1| - 1.6e-05 25.0 1.4 0.28 11.9 0.0 4.7 5 0 0 5 5 4 1 Tetratricopeptide repeat PPR PF01535.20 gi|73670453|ref|YP_306468.1| - 2.4e-05 24.3 0.3 0.33 11.3 0.0 4.2 3 0 0 3 3 3 1 PPR repeat TPR_20 PF14561.6 gi|73670453|ref|YP_306468.1| - 0.00022 21.5 2.6 0.0076 16.6 0.7 3.6 3 2 2 5 5 4 1 Tetratricopeptide repeat TPR_21 PF09976.9 gi|73670453|ref|YP_306468.1| - 0.00022 21.0 1.5 1.4 8.6 0.0 4.0 1 1 4 5 5 5 1 Tetratricopeptide repeat-like domain TPR_MalT PF17874.1 gi|73670453|ref|YP_306468.1| - 0.00051 19.5 0.4 2.2 7.6 0.1 3.4 1 1 2 3 3 3 1 MalT-like TPR region Coatomer_E PF04733.14 gi|73670453|ref|YP_306468.1| - 0.00074 19.0 0.2 0.14 11.5 0.0 2.9 2 1 1 3 3 3 1 Coatomer epsilon subunit MIT PF04212.18 gi|73670453|ref|YP_306468.1| - 0.0047 17.0 8.7 28 4.9 0.1 6.0 6 1 1 7 7 7 0 MIT (microtubule interacting and transport) domain DUF5113 PF17140.4 gi|73670453|ref|YP_306468.1| - 0.01 15.6 0.0 17 5.2 0.0 3.6 2 1 1 3 3 3 0 Domain of unknown function (DUF5113) ChAPs PF09295.10 gi|73670453|ref|YP_306468.1| - 0.014 14.4 0.1 1.3 8.0 0.0 2.3 2 0 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) SHNi-TPR PF10516.9 gi|73670453|ref|YP_306468.1| - 0.36 10.3 4.1 47 3.6 0.2 4.2 4 0 0 4 4 4 0 SHNi-TPR Wzy_C_2 PF11846.8 gi|73670453|ref|YP_306468.1| - 0.41 10.5 2.0 1.8 8.5 0.1 2.6 2 1 0 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal PASTA PF03793.19 gi|73670454|ref|YP_306469.1| - 2.3e-12 46.6 2.3 5.8e-12 45.3 1.1 2.2 2 0 0 2 2 2 1 PASTA domain PUB PF09409.10 gi|73670454|ref|YP_306469.1| - 0.01 15.8 0.2 2.6 8.1 0.1 2.2 1 1 1 2 2 2 2 PUB domain IFT57 PF10498.9 gi|73670454|ref|YP_306469.1| - 0.019 13.9 1.8 0.025 13.6 1.8 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Tektin PF03148.14 gi|73670454|ref|YP_306469.1| - 0.063 12.0 3.3 0.084 11.6 3.3 1.1 1 0 0 1 1 1 0 Tektin family Myosin_tail_1 PF01576.19 gi|73670454|ref|YP_306469.1| - 0.064 11.1 6.8 0.066 11.0 6.8 1.1 1 0 0 1 1 1 0 Myosin tail KxDL PF10241.9 gi|73670454|ref|YP_306469.1| - 0.1 12.9 1.0 0.18 12.1 1.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein Fmp27_WPPW PF10359.9 gi|73670454|ref|YP_306469.1| - 0.1 11.4 0.8 0.12 11.2 0.8 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain SBP_bac_5 PF00496.22 gi|73670454|ref|YP_306469.1| - 0.12 11.3 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle DUF1664 PF07889.12 gi|73670454|ref|YP_306469.1| - 0.17 11.9 1.0 0.32 11.0 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 gi|73670454|ref|YP_306469.1| - 0.18 10.7 3.4 0.26 10.1 3.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein SlyX PF04102.12 gi|73670454|ref|YP_306469.1| - 1.1 9.9 3.6 1.2 9.8 1.5 2.0 1 1 0 2 2 2 0 SlyX DHR10 PF18595.1 gi|73670454|ref|YP_306469.1| - 1.5 8.9 9.0 5.4 7.1 6.0 2.4 2 1 1 3 3 3 0 Designed helical repeat protein 10 domain zf-C4H2 PF10146.9 gi|73670454|ref|YP_306469.1| - 4.4 7.6 5.5 6.1 7.1 5.5 1.2 1 1 0 1 1 1 0 Zinc finger-containing protein DUF2559 PF10832.8 gi|73670454|ref|YP_306469.1| - 8.6 6.5 6.7 0.89 9.7 0.5 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2559) TctA PF01970.16 gi|73670455|ref|YP_306470.1| - 3.1e-70 237.0 31.7 3.7e-70 236.7 31.7 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family MpPF26 PF07666.11 gi|73670455|ref|YP_306470.1| - 2.6 8.1 12.3 10 6.3 1.1 2.8 2 0 0 2 2 2 0 M penetrans paralogue family 26 Phosphorylase PF00343.20 gi|73670456|ref|YP_306471.1| - 1.7e-25 89.5 0.0 1.2e-18 66.9 0.0 2.6 2 1 0 3 3 3 2 Carbohydrate phosphorylase PAS_3 PF08447.12 gi|73670457|ref|YP_306472.1| - 1.5e-17 63.7 0.1 2.4e-17 63.0 0.1 1.4 1 0 0 1 1 1 1 PAS fold GAF_2 PF13185.6 gi|73670457|ref|YP_306472.1| - 3.6e-11 43.5 0.0 4.8e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|73670457|ref|YP_306472.1| - 0.0011 19.3 0.0 0.0015 18.9 0.0 1.2 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.10 gi|73670457|ref|YP_306472.1| - 0.014 15.7 0.0 0.03 14.6 0.0 1.6 2 0 0 2 2 2 0 PAS fold PAS PF00989.25 gi|73670457|ref|YP_306472.1| - 0.029 14.4 0.0 0.073 13.1 0.0 1.7 1 0 0 1 1 1 0 PAS fold dCache_3 PF14827.6 gi|73670457|ref|YP_306472.1| - 0.062 12.9 0.1 0.39 10.3 0.1 2.0 1 1 0 1 1 1 0 Double sensory domain of two-component sensor kinase GAF PF01590.26 gi|73670457|ref|YP_306472.1| - 0.091 13.4 0.0 0.13 12.9 0.0 1.3 1 0 0 1 1 1 0 GAF domain PAS_3 PF08447.12 gi|73670458|ref|YP_306473.1| - 1.1e-18 67.3 0.1 1.8e-18 66.6 0.1 1.4 1 0 0 1 1 1 1 PAS fold GAF_2 PF13185.6 gi|73670458|ref|YP_306473.1| - 1.6e-11 44.6 0.0 2.4e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|73670458|ref|YP_306473.1| - 0.00013 22.4 0.0 0.00018 21.8 0.0 1.3 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.10 gi|73670458|ref|YP_306473.1| - 0.00039 20.6 0.0 0.0018 18.5 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|73670458|ref|YP_306473.1| - 0.014 15.7 0.1 0.034 14.4 0.1 1.7 1 0 0 1 1 1 0 PAS domain PAS PF00989.25 gi|73670458|ref|YP_306473.1| - 0.015 15.3 0.0 0.03 14.3 0.0 1.5 1 0 0 1 1 1 0 PAS fold SUKH_6 PF14568.6 gi|73670458|ref|YP_306473.1| - 0.031 14.7 1.7 0.073 13.5 0.1 2.1 2 0 0 2 2 2 0 SMI1-KNR4 cell-wall GAF PF01590.26 gi|73670458|ref|YP_306473.1| - 0.048 14.3 0.0 0.071 13.7 0.0 1.3 1 0 0 1 1 1 0 GAF domain Putative_PNPOx PF01243.20 gi|73670459|ref|YP_306474.1| - 6.3e-17 61.6 0.0 8.1e-17 61.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|73670459|ref|YP_306474.1| - 1.3e-09 37.9 0.0 1.5e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Pyridox_ox_2 PF12900.7 gi|73670459|ref|YP_306474.1| - 2e-08 34.4 0.0 2.7e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF1521 PF07481.11 gi|73670459|ref|YP_306474.1| - 0.1 12.6 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1521) Fasciclin PF02469.22 gi|73670460|ref|YP_306475.1| - 1.6e-33 115.7 0.0 2.4e-33 115.1 0.0 1.3 1 0 0 1 1 1 1 Fasciclin domain Methyltransf_11 PF08241.12 gi|73670461|ref|YP_306476.1| - 0.003 18.2 0.0 0.13 13.0 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670461|ref|YP_306476.1| - 0.0071 17.0 0.0 0.47 11.2 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain MDD_C PF18376.1 gi|73670461|ref|YP_306476.1| - 0.05 13.3 0.0 0.099 12.4 0.0 1.4 1 0 0 1 1 1 0 Mevalonate 5-diphosphate decarboxylase C-terminal domain Putative_PNPOx PF01243.20 gi|73670463|ref|YP_306478.1| - 3.7e-21 75.1 0.0 4.5e-21 74.8 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|73670463|ref|YP_306478.1| - 0.00038 20.1 0.0 0.00049 19.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Pyridox_oxase_2 PF12766.7 gi|73670463|ref|YP_306478.1| - 0.072 13.7 0.0 0.099 13.3 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.12 gi|73670463|ref|YP_306478.1| - 0.072 12.9 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) DUF1638 PF07796.11 gi|73670465|ref|YP_306480.1| - 6e-31 107.7 0.1 7.5e-31 107.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) CHASE4 PF05228.13 gi|73670466|ref|YP_306481.1| - 3.5e-39 134.2 0.0 1.7e-36 125.5 0.0 2.3 2 0 0 2 2 2 2 CHASE4 domain HATPase_c PF02518.26 gi|73670466|ref|YP_306481.1| - 2.4e-31 108.5 0.8 4.1e-31 107.8 0.0 1.8 2 0 0 2 2 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|73670466|ref|YP_306481.1| - 3.1e-19 68.8 0.0 1.9e-18 66.3 0.0 2.4 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|73670466|ref|YP_306481.1| - 3.4e-14 53.0 0.0 7.8e-14 51.9 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|73670466|ref|YP_306481.1| - 1.1e-06 28.8 0.2 5.4e-06 26.6 0.0 2.3 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 gi|73670466|ref|YP_306481.1| - 0.00016 21.6 0.0 0.00038 20.4 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_5 PF14501.6 gi|73670466|ref|YP_306481.1| - 0.00017 21.4 0.0 0.00046 20.1 0.0 1.7 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.6 gi|73670466|ref|YP_306481.1| - 0.00022 21.1 0.1 0.0011 18.8 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|73670466|ref|YP_306481.1| - 0.0055 17.1 0.0 0.012 15.9 0.0 1.5 1 0 0 1 1 1 1 HAMP domain PAS_10 PF13596.6 gi|73670466|ref|YP_306481.1| - 0.0069 17.0 0.0 0.022 15.3 0.0 1.9 1 0 0 1 1 1 1 PAS domain HATPase_c_2 PF13581.6 gi|73670466|ref|YP_306481.1| - 0.012 15.5 0.0 0.047 13.7 0.0 1.9 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain PAS_8 PF13188.7 gi|73670466|ref|YP_306481.1| - 0.099 12.7 0.0 0.31 11.1 0.0 1.9 1 0 0 1 1 1 0 PAS domain Fungal_TACC PF12709.7 gi|73670466|ref|YP_306481.1| - 1.5 9.3 5.9 0.97 9.9 2.6 2.4 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins CxxCxxCC PF03692.15 gi|73670467|ref|YP_306482.1| - 2.2e-05 25.1 2.6 8.7e-05 23.1 2.6 2.0 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain DUF3109 PF11307.8 gi|73670467|ref|YP_306482.1| - 0.039 13.8 3.8 0.11 12.3 3.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3109) Transglut_core PF01841.19 gi|73670468|ref|YP_306483.1| - 0.0012 19.2 0.1 0.003 18.0 0.1 1.9 1 1 0 1 1 1 1 Transglutaminase-like superfamily Engrail_1_C_sig PF10525.9 gi|73670468|ref|YP_306483.1| - 0.14 11.4 0.0 0.27 10.5 0.0 1.4 1 0 0 1 1 1 0 Engrailed homeobox C-terminal signature domain PMR5N PF14416.6 gi|73670468|ref|YP_306483.1| - 0.47 10.8 0.1 0.47 10.8 0.1 2.7 3 1 0 3 3 3 0 PMR5 N terminal Domain MacB_PCD PF12704.7 gi|73670469|ref|YP_306484.1| - 1.5e-30 107.0 4.1 1.5e-30 107.0 4.1 2.4 2 1 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|73670469|ref|YP_306484.1| - 9.9e-14 51.6 13.5 1.2e-13 51.3 3.8 3.2 3 0 0 3 3 3 2 FtsX-like permease family NPCBM_assoc PF10633.9 gi|73670470|ref|YP_306485.1| - 1.9e-11 44.1 0.3 0.00016 21.8 0.0 4.5 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|73670470|ref|YP_306485.1| - 4.6e-07 30.0 11.8 0.11 12.7 1.0 3.9 2 1 0 3 3 3 3 CARDB DUF11 PF01345.18 gi|73670470|ref|YP_306485.1| - 5.8e-07 29.7 6.6 0.1 12.9 0.2 3.8 3 2 0 3 3 3 2 Domain of unknown function DUF11 Wzt_C PF14524.6 gi|73670470|ref|YP_306485.1| - 4.6e-06 26.7 0.5 0.071 13.1 0.0 4.6 2 1 2 5 5 5 1 Wzt C-terminal domain DUF5385 PF17359.2 gi|73670470|ref|YP_306485.1| - 0.023 14.3 0.0 0.037 13.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5385) A2M PF00207.22 gi|73670470|ref|YP_306485.1| - 0.12 12.2 0.3 17 5.4 0.0 3.5 2 1 1 3 3 3 0 Alpha-2-macroglobulin family Fungus-induced PF10917.8 gi|73670470|ref|YP_306485.1| - 0.13 12.6 0.2 0.63 10.4 0.1 2.2 2 0 0 2 2 2 0 Fungus-induced protein Ig_GlcNase PF18368.1 gi|73670470|ref|YP_306485.1| - 0.13 12.4 3.5 1.1 9.5 0.0 3.5 4 1 1 5 5 5 0 Exo-beta-D-glucosaminidase Ig-fold domain He_PIG PF05345.12 gi|73670470|ref|YP_306485.1| - 0.16 12.2 4.7 12 6.1 0.0 3.5 3 0 0 3 3 2 0 Putative Ig domain CopC PF04234.12 gi|73670470|ref|YP_306485.1| - 0.16 13.0 5.6 0.95 10.6 0.2 3.7 3 1 1 4 4 4 0 CopC domain TMEMspv1-c74-12 PF11044.8 gi|73670470|ref|YP_306485.1| - 1.9 8.6 3.8 0.41 10.7 0.1 1.8 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein ABC_tran PF00005.27 gi|73670471|ref|YP_306486.1| - 7.7e-31 107.4 0.0 1.4e-30 106.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|73670471|ref|YP_306486.1| - 6.8e-08 32.2 0.0 1.4e-07 31.2 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73670471|ref|YP_306486.1| - 5.4e-05 23.2 0.4 0.06 13.2 0.0 2.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|73670471|ref|YP_306486.1| - 0.00052 19.7 0.0 0.00098 18.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|73670471|ref|YP_306486.1| - 0.0011 19.3 0.0 0.0022 18.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73670471|ref|YP_306486.1| - 0.0043 17.0 0.0 0.0075 16.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_13 PF13166.6 gi|73670471|ref|YP_306486.1| - 0.011 14.4 0.0 0.15 10.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|73670471|ref|YP_306486.1| - 0.015 15.8 0.5 0.25 11.9 0.4 2.4 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|73670471|ref|YP_306486.1| - 0.026 14.8 0.1 0.096 13.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.20 gi|73670471|ref|YP_306486.1| - 0.029 13.5 0.0 0.036 13.2 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit Rad17 PF03215.15 gi|73670471|ref|YP_306486.1| - 0.049 13.5 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_23 PF13476.6 gi|73670471|ref|YP_306486.1| - 0.087 13.3 0.0 0.087 13.3 0.0 1.9 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|73670471|ref|YP_306486.1| - 0.11 12.2 0.0 0.29 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|73670471|ref|YP_306486.1| - 0.12 11.4 0.4 0.33 10.0 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein RNA_helicase PF00910.22 gi|73670471|ref|YP_306486.1| - 0.13 12.6 0.0 0.38 11.2 0.0 1.8 1 0 0 1 1 1 0 RNA helicase AAA_5 PF07728.14 gi|73670471|ref|YP_306486.1| - 0.14 12.1 0.1 1.5 8.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF4405 PF14358.6 gi|73670473|ref|YP_306488.1| - 5.3e-18 65.3 26.9 8e-09 35.9 10.7 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4405) Ni_hydr_CYTB PF01292.20 gi|73670473|ref|YP_306488.1| - 4.1e-08 33.0 20.7 0.00023 20.8 6.9 2.1 1 1 1 2 2 2 2 Prokaryotic cytochrome b561 Ferric_reduct PF01794.19 gi|73670473|ref|YP_306488.1| - 0.0046 17.1 13.8 0.086 13.0 3.1 2.2 1 1 1 2 2 2 2 Ferric reductase like transmembrane component DUF4534 PF15049.6 gi|73670473|ref|YP_306488.1| - 0.014 15.1 6.5 0.15 11.8 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4534) CopD PF05425.13 gi|73670473|ref|YP_306488.1| - 0.41 11.0 6.3 0.92 9.9 1.4 2.1 1 1 1 2 2 2 0 Copper resistance protein D DUF5542 PF17696.1 gi|73670473|ref|YP_306488.1| - 0.48 10.6 0.1 0.48 10.6 0.1 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5542) 7TM_GPCR_Srv PF10323.9 gi|73670473|ref|YP_306488.1| - 0.83 9.0 10.4 0.029 13.7 2.1 2.2 1 1 1 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srv DUF3392 PF11872.8 gi|73670473|ref|YP_306488.1| - 2.4 8.5 11.1 2.8 8.3 1.4 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF3392) DUF1980 PF09323.10 gi|73670473|ref|YP_306488.1| - 2.9 7.8 11.7 6.6 6.6 3.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) DUF169 PF02596.15 gi|73670474|ref|YP_306489.1| - 6.9e-39 133.9 0.1 8.3e-39 133.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 FMN_red PF03358.15 gi|73670475|ref|YP_306490.1| - 3.7e-09 36.5 0.0 4.2e-09 36.3 0.0 1.0 1 0 0 1 1 1 1 NADPH-dependent FMN reductase RseC_MucC PF04246.12 gi|73670475|ref|YP_306490.1| - 0.027 14.4 0.3 0.036 14.0 0.3 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Flavodoxin_2 PF02525.17 gi|73670475|ref|YP_306490.1| - 0.075 12.7 0.0 0.084 12.6 0.0 1.0 1 0 0 1 1 1 0 Flavodoxin-like fold NAD_binding_8 PF13450.6 gi|73670476|ref|YP_306491.1| - 1.2e-18 67.0 0.1 2.3e-18 66.2 0.1 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 gi|73670476|ref|YP_306491.1| - 2.2e-16 60.2 0.0 3.4e-16 59.6 0.0 1.4 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.24 gi|73670476|ref|YP_306491.1| - 8e-12 44.9 0.2 5.1e-09 35.7 0.2 2.7 3 0 0 3 3 3 2 FAD binding domain DAO PF01266.24 gi|73670476|ref|YP_306491.1| - 6.4e-11 42.4 0.0 1.3e-07 31.6 0.1 2.5 3 0 0 3 3 3 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|73670476|ref|YP_306491.1| - 2e-09 37.3 0.0 3.7e-09 36.5 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|73670476|ref|YP_306491.1| - 6.3e-08 31.7 0.4 8.9e-07 27.9 0.1 2.5 2 1 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|73670476|ref|YP_306491.1| - 7.8e-07 28.7 0.1 1.7e-06 27.5 0.1 1.5 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 gi|73670476|ref|YP_306491.1| - 2.6e-06 26.8 0.2 5.7e-06 25.7 0.1 1.6 2 0 0 2 2 2 1 Thi4 family Pyr_redox_2 PF07992.14 gi|73670476|ref|YP_306491.1| - 6.2e-06 25.7 0.1 3.2e-05 23.3 0.0 2.1 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|73670476|ref|YP_306491.1| - 2.5e-05 23.5 2.0 0.00062 19.0 0.2 2.9 2 1 1 3 3 3 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|73670476|ref|YP_306491.1| - 2.7e-05 24.6 0.6 0.00029 21.3 0.1 2.6 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|73670476|ref|YP_306491.1| - 0.00022 20.6 0.2 0.0077 15.5 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GDI PF00996.18 gi|73670476|ref|YP_306491.1| - 0.00022 19.9 0.2 0.00022 19.9 0.2 1.5 2 0 0 2 2 2 1 GDP dissociation inhibitor AlaDh_PNT_C PF01262.21 gi|73670476|ref|YP_306491.1| - 0.0046 16.3 0.0 0.0091 15.3 0.0 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|73670476|ref|YP_306491.1| - 0.034 13.2 0.0 0.049 12.7 0.0 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|73670476|ref|YP_306491.1| - 0.083 11.7 0.0 0.2 10.5 0.1 1.5 2 0 0 2 2 2 0 Tryptophan halogenase K_oxygenase PF13434.6 gi|73670476|ref|YP_306491.1| - 0.13 11.4 0.0 1.6 7.8 0.0 2.2 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) ApbA PF02558.16 gi|73670476|ref|YP_306491.1| - 0.19 11.3 0.2 0.43 10.2 0.2 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF1978 PF09321.10 gi|73670477|ref|YP_306492.1| - 0.00037 19.9 5.2 0.019 14.3 1.9 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF1978) NPV_P10 PF05531.12 gi|73670477|ref|YP_306492.1| - 0.0018 18.7 7.3 2.7 8.5 3.6 3.3 2 1 0 2 2 2 2 Nucleopolyhedrovirus P10 protein Syntaxin-6_N PF09177.11 gi|73670477|ref|YP_306492.1| - 0.037 14.6 8.6 0.6 10.7 1.9 3.2 2 1 1 3 3 3 0 Syntaxin 6, N-terminal DUF4094 PF13334.6 gi|73670477|ref|YP_306492.1| - 0.11 12.9 1.9 7.4 7.1 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) ATP-synt_F6 PF05511.11 gi|73670477|ref|YP_306492.1| - 0.12 12.8 0.1 0.4 11.1 0.0 1.9 2 0 0 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 Phage_HK97_TLTM PF06120.11 gi|73670477|ref|YP_306492.1| - 0.13 11.4 7.4 0.27 10.4 6.1 1.8 2 0 0 2 2 2 0 Tail length tape measure protein DUF4665 PF15679.5 gi|73670477|ref|YP_306492.1| - 0.38 11.4 5.4 2.1 9.0 1.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4665) Cas_Cas1 PF01867.16 gi|73670477|ref|YP_306492.1| - 1.1 8.4 5.8 8 5.5 0.2 2.3 1 1 1 2 2 2 0 CRISPR associated protein Cas1 Allexi_40kDa PF05549.11 gi|73670477|ref|YP_306492.1| - 1.4 8.4 8.4 0.64 9.5 3.6 2.1 1 1 1 2 2 2 0 Allexivirus 40kDa protein GvpG PF05120.12 gi|73670477|ref|YP_306492.1| - 4.2 7.4 6.9 1.7 8.7 0.5 2.8 3 0 0 3 3 3 0 Gas vesicle protein G Baculo_PEP_C PF04513.12 gi|73670477|ref|YP_306492.1| - 4.8 7.2 9.8 1.8 8.6 1.9 3.0 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus V_ATPase_I PF01496.19 gi|73670477|ref|YP_306492.1| - 6.2 4.6 7.9 1 7.2 3.6 1.7 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family HEAT_2 PF13646.6 gi|73670478|ref|YP_306493.1| - 2e-93 306.9 25.7 1.8e-14 53.9 1.0 6.8 2 2 6 8 8 8 8 HEAT repeats HEAT_PBS PF03130.16 gi|73670478|ref|YP_306493.1| - 4.6e-44 144.6 22.6 4.1e-05 23.8 0.0 13.0 13 0 0 13 13 13 8 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|73670478|ref|YP_306493.1| - 2.8e-43 142.2 6.4 2.2e-05 24.3 0.0 12.9 13 0 0 13 13 13 7 HEAT repeat HEAT_EZ PF13513.6 gi|73670478|ref|YP_306493.1| - 4.3e-28 97.4 19.4 0.00015 22.1 0.0 11.6 11 3 2 13 13 12 4 HEAT-like repeat Arm PF00514.23 gi|73670478|ref|YP_306493.1| - 3e-15 55.7 12.1 0.12 12.5 0.0 10.3 10 2 2 12 12 12 3 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|73670478|ref|YP_306493.1| - 1.2e-13 51.4 0.2 0.033 14.2 0.1 7.1 1 1 6 7 7 7 5 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|73670478|ref|YP_306493.1| - 2.3e-10 39.7 0.0 0.0005 18.8 0.0 5.4 2 2 0 3 3 3 3 Adaptin N terminal region ERAP1_C PF11838.8 gi|73670478|ref|YP_306493.1| - 3.6e-08 33.3 0.2 1.2e-05 25.1 0.1 3.0 1 1 1 2 2 2 1 ERAP1-like C-terminal domain RTP1_C1 PF10363.9 gi|73670478|ref|YP_306493.1| - 5.2e-06 26.6 0.0 2.5 8.3 0.0 5.3 3 2 2 5 5 5 1 Required for nuclear transport of RNA pol II C-terminus 1 Aconitase_B_N PF11791.8 gi|73670478|ref|YP_306493.1| - 2e-05 24.7 0.3 10 6.2 0.1 4.8 5 1 1 7 7 6 0 Aconitate B N-terminal domain RasGEF_N_2 PF14663.6 gi|73670478|ref|YP_306493.1| - 0.00014 22.2 0.0 48 4.4 0.0 6.1 4 3 2 7 7 7 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain CLASP_N PF12348.8 gi|73670478|ref|YP_306493.1| - 0.00019 21.1 1.2 13 5.3 0.0 6.1 5 2 1 6 6 6 0 CLASP N terminal Cohesin_HEAT PF12765.7 gi|73670478|ref|YP_306493.1| - 0.00046 20.4 14.0 0.3 11.4 0.1 6.4 6 0 0 6 6 6 1 HEAT repeat associated with sister chromatid cohesion DUF1641 PF07849.11 gi|73670478|ref|YP_306493.1| - 0.0012 18.7 8.7 1.9 8.4 0.0 4.9 5 0 0 5 5 5 2 Protein of unknown function (DUF1641) IFRD PF05004.13 gi|73670478|ref|YP_306493.1| - 0.0017 17.5 1.8 0.83 8.7 0.0 4.2 2 1 1 4 4 4 1 Interferon-related developmental regulator (IFRD) Vitellogenin_N PF01347.22 gi|73670478|ref|YP_306493.1| - 0.0044 15.5 0.0 3.6 5.9 0.0 3.4 2 1 3 5 5 5 1 Lipoprotein amino terminal region zf-ribbon_3 PF13248.6 gi|73670478|ref|YP_306493.1| - 0.0054 16.1 1.4 0.012 14.9 1.4 1.6 1 0 0 1 1 1 1 zinc-ribbon domain CHAD PF05235.14 gi|73670478|ref|YP_306493.1| - 0.017 15.1 1.1 2.5 8.0 1.1 2.3 1 1 0 1 1 1 0 CHAD domain YacG PF03884.14 gi|73670478|ref|YP_306493.1| - 0.029 14.1 1.1 0.054 13.2 1.1 1.4 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG DZR PF12773.7 gi|73670478|ref|YP_306493.1| - 0.037 14.1 0.6 0.084 12.9 0.6 1.5 1 0 0 1 1 1 0 Double zinc ribbon Tti2 PF10521.9 gi|73670478|ref|YP_306493.1| - 0.041 13.4 0.2 46 3.4 0.0 4.2 3 2 1 4 4 4 0 Tti2 family DUF5071 PF16804.5 gi|73670478|ref|YP_306493.1| - 0.064 13.5 0.0 22 5.4 0.0 3.4 4 0 0 4 4 3 0 Domain of unknown function (DUF5071) MMS19_C PF12460.8 gi|73670478|ref|YP_306493.1| - 0.085 12.0 0.2 8.5 5.4 0.0 3.5 3 1 0 3 3 3 0 RNAPII transcription regulator C-terminal zf-RING_7 PF02591.15 gi|73670478|ref|YP_306493.1| - 0.83 9.9 2.7 1.5 9.1 0.0 2.5 2 0 0 2 2 2 0 C4-type zinc ribbon domain zf-Di19 PF05605.12 gi|73670478|ref|YP_306493.1| - 3.4 8.0 5.4 9.7 6.6 0.4 2.6 2 1 1 3 3 2 0 Drought induced 19 protein (Di19), zinc-binding Hexapep PF00132.24 gi|73670479|ref|YP_306494.1| - 2.4e-13 49.2 1.9 0.00036 20.1 0.0 4.4 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73670479|ref|YP_306494.1| - 4e-05 23.3 8.6 0.061 13.1 0.3 5.1 4 2 1 5 5 5 3 Hexapeptide repeat of succinyl-transferase Adhesin_P1_N PF18652.1 gi|73670479|ref|YP_306494.1| - 0.051 13.6 0.1 0.091 12.8 0.1 1.3 1 0 0 1 1 1 0 Adhesin P1 N-terminal domain PD40 PF07676.12 gi|73670480|ref|YP_306495.1| - 6.9e-23 80.0 3.5 1.9e-09 37.2 0.2 4.6 5 0 0 5 5 5 3 WD40-like Beta Propeller Repeat Pectate_lyase22 PF14583.6 gi|73670480|ref|YP_306495.1| - 0.019 13.7 1.2 0.73 8.4 0.0 3.1 2 1 1 4 4 4 0 Oligogalacturonate lyase NAPRTase PF04095.16 gi|73670481|ref|YP_306496.1| - 2.1e-61 207.6 0.0 3e-61 207.1 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family NAPRTase_N PF17767.1 gi|73670481|ref|YP_306496.1| - 2e-35 121.9 0.5 3.2e-35 121.2 0.5 1.3 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HisKA_3 PF07730.13 gi|73670481|ref|YP_306496.1| - 0.12 12.9 0.0 0.24 11.9 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase DUF2161 PF09929.9 gi|73670481|ref|YP_306496.1| - 0.14 12.3 0.0 0.39 10.8 0.0 1.7 2 0 0 2 2 2 0 Putative PD-(D/E)XK phosphodiesterase (DUF2161) DUF4105 PF13387.6 gi|73670481|ref|YP_306496.1| - 0.21 11.2 0.7 0.39 10.3 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4105) Cys_Met_Meta_PP PF01053.20 gi|73670482|ref|YP_306497.1| - 4.7e-152 506.0 0.0 5.3e-152 505.8 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Met_gamma_lyase PF06838.11 gi|73670482|ref|YP_306497.1| - 1.1e-09 37.3 0.0 8.2e-09 34.5 0.0 1.9 1 1 0 1 1 1 1 Methionine gamma-lyase Aminotran_1_2 PF00155.21 gi|73670482|ref|YP_306497.1| - 9.1e-09 35.0 0.0 1.2e-08 34.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|73670482|ref|YP_306497.1| - 1.3e-05 24.4 0.0 2.4e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|73670482|ref|YP_306497.1| - 0.00033 20.1 0.0 0.00052 19.4 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|73670482|ref|YP_306497.1| - 0.0037 16.6 0.2 0.055 12.8 0.2 2.5 1 1 0 1 1 1 1 Beta-eliminating lyase DJ-1_PfpI PF01965.24 gi|73670483|ref|YP_306498.1| - 8.4e-55 185.1 0.0 9.3e-55 184.9 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|73670483|ref|YP_306498.1| - 8.2e-05 22.5 0.0 9.2e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|73670483|ref|YP_306498.1| - 0.0024 17.7 0.0 0.0034 17.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase C26 ThiJ_like PF17124.5 gi|73670483|ref|YP_306498.1| - 0.081 12.6 0.0 0.59 9.8 0.0 2.1 1 1 1 2 2 2 0 ThiJ/PfpI family-like IBD PF10416.9 gi|73670484|ref|YP_306499.1| - 0.026 14.6 2.6 0.026 14.6 2.6 2.0 1 1 0 2 2 2 0 Transcription-initiator DNA-binding domain IBD RP-C_C PF11800.8 gi|73670484|ref|YP_306499.1| - 6.1 6.9 10.6 7 6.7 10.6 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region VAPB_antitox PF02697.14 gi|73670485|ref|YP_306500.1| - 0.0016 19.2 0.1 0.0038 18.0 0.1 1.8 1 1 1 2 2 2 1 Putative antitoxin DSPc PF00782.20 gi|73670486|ref|YP_306501.1| - 0.0035 17.2 0.5 0.035 13.9 0.1 2.0 1 1 1 2 2 2 1 Dual specificity phosphatase, catalytic domain HTH_34 PF13601.6 gi|73670486|ref|YP_306501.1| - 0.016 15.3 0.0 0.089 13.0 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain Polbeta PF18765.1 gi|73670487|ref|YP_306502.1| - 5.6e-12 45.6 0.0 5.9e-12 45.5 0.0 1.0 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|73670487|ref|YP_306502.1| - 1.6e-07 31.5 0.1 1.7e-07 31.4 0.1 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF294 PF03445.13 gi|73670487|ref|YP_306502.1| - 0.019 14.8 0.0 0.019 14.8 0.0 1.1 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 Adenyl_transf PF04439.12 gi|73670487|ref|YP_306502.1| - 0.065 12.3 0.0 0.074 12.2 0.0 1.0 1 0 0 1 1 1 0 Streptomycin adenylyltransferase Polbeta PF18765.1 gi|73670488|ref|YP_306503.1| - 1.4e-05 25.1 0.1 1.9e-05 24.7 0.1 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase eRF1_1 PF03463.15 gi|73670488|ref|YP_306503.1| - 0.052 13.6 0.0 0.057 13.4 0.0 1.1 1 0 0 1 1 1 0 eRF1 domain 1 Glyoxalase PF00903.25 gi|73670489|ref|YP_306504.1| - 3.6e-08 33.7 0.0 5.8e-08 33.0 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 gi|73670489|ref|YP_306504.1| - 0.0038 17.1 0.0 0.0086 16.0 0.0 1.5 2 0 0 2 2 2 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 gi|73670489|ref|YP_306504.1| - 0.014 15.7 0.0 0.069 13.4 0.0 1.9 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|73670489|ref|YP_306504.1| - 0.04 14.7 0.0 0.054 14.3 0.0 1.3 1 1 0 1 1 1 0 Glyoxalase-like domain BRCT_2 PF16589.5 gi|73670489|ref|YP_306504.1| - 0.067 13.6 0.0 0.095 13.1 0.0 1.2 1 0 0 1 1 1 0 BRCT domain, a BRCA1 C-terminus domain CbbQ_C PF08406.10 gi|73670490|ref|YP_306505.1| - 0.025 14.8 0.1 0.54 10.6 0.1 2.1 2 0 0 2 2 2 0 CbbQ/NirQ/NorQ C-terminal DUF4655 PF15548.6 gi|73670491|ref|YP_306506.1| - 0.01 14.8 1.7 0.011 14.7 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4655) DUF4820 PF16091.5 gi|73670491|ref|YP_306506.1| - 0.11 11.9 1.9 0.14 11.5 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) SID-1_RNA_chan PF13965.6 gi|73670491|ref|YP_306506.1| - 0.33 9.3 0.7 0.34 9.3 0.7 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 YfhD PF14151.6 gi|73670491|ref|YP_306506.1| - 3.8 7.7 5.5 1.6e+02 2.5 5.5 2.4 1 1 0 1 1 1 0 YfhD-like protein AI-2E_transport PF01594.16 gi|73670492|ref|YP_306507.1| - 2e-43 148.8 46.4 2.3e-43 148.6 46.4 1.0 1 0 0 1 1 1 1 AI-2E family transporter PAS_3 PF08447.12 gi|73670493|ref|YP_306508.1| - 1.3e-49 166.5 1.8 2.9e-18 65.9 0.0 5.7 5 1 0 5 5 4 3 PAS fold PAS_9 PF13426.7 gi|73670493|ref|YP_306508.1| - 5.9e-41 138.9 0.0 5.3e-16 58.8 0.0 5.9 6 0 0 6 6 6 4 PAS domain PAS PF00989.25 gi|73670493|ref|YP_306508.1| - 1.2e-35 121.9 0.0 1.4e-11 44.3 0.0 5.8 5 1 0 5 5 5 5 PAS fold PAS_4 PF08448.10 gi|73670493|ref|YP_306508.1| - 5.1e-28 97.5 0.0 6.4e-12 45.7 0.0 6.1 5 1 0 5 5 5 4 PAS fold HisKA_2 PF07568.12 gi|73670493|ref|YP_306508.1| - 1.8e-27 95.2 2.9 3e-27 94.5 1.1 2.5 2 0 0 2 2 1 1 Histidine kinase GAF_2 PF13185.6 gi|73670493|ref|YP_306508.1| - 4.5e-19 69.1 0.0 9.3e-19 68.1 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_8 PF13188.7 gi|73670493|ref|YP_306508.1| - 6.6e-10 38.8 0.0 0.0096 15.9 0.0 4.6 5 0 0 5 5 5 2 PAS domain HATPase_c PF02518.26 gi|73670493|ref|YP_306508.1| - 8.1e-10 39.2 0.1 3.6e-09 37.1 0.1 2.2 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF PF01590.26 gi|73670493|ref|YP_306508.1| - 7.5e-06 26.6 0.0 1.4e-05 25.7 0.0 1.5 1 0 0 1 1 1 1 GAF domain PAS_10 PF13596.6 gi|73670493|ref|YP_306508.1| - 3.2e-05 24.5 0.1 1.6 9.3 0.0 5.0 4 2 0 4 4 4 1 PAS domain HATPase_c_2 PF13581.6 gi|73670493|ref|YP_306508.1| - 0.00047 20.1 0.0 0.0018 18.2 0.0 2.0 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_7 PF12860.7 gi|73670493|ref|YP_306508.1| - 0.0032 17.6 2.7 0.091 12.9 0.1 4.3 4 1 0 4 4 4 1 PAS fold HWE_HK PF07536.14 gi|73670493|ref|YP_306508.1| - 0.017 15.8 0.0 0.074 13.8 0.0 2.2 1 0 0 1 1 1 0 HWE histidine kinase GAF_3 PF13492.6 gi|73670493|ref|YP_306508.1| - 0.022 15.1 0.0 0.057 13.8 0.0 1.8 1 0 0 1 1 1 0 GAF domain Pox_D2 PF04701.13 gi|73670493|ref|YP_306508.1| - 0.13 12.4 0.6 0.44 10.7 0.6 1.8 1 0 0 1 1 1 0 Pox virus D2 protein CNP_C_terminal PF17839.1 gi|73670493|ref|YP_306508.1| - 0.33 11.7 3.3 19 6.0 0.0 2.9 3 0 0 3 3 2 0 C-terminal domain of cyclic nucleotide phosphodiesterase PAS_9 PF13426.7 gi|73670494|ref|YP_306509.1| - 4.5e-61 203.6 5.3 6.1e-15 55.3 0.0 6.8 6 0 0 6 6 6 5 PAS domain PAS PF00989.25 gi|73670494|ref|YP_306509.1| - 1.4e-55 186.2 0.1 4.6e-20 71.7 0.0 5.5 5 0 0 5 5 5 5 PAS fold PAS_3 PF08447.12 gi|73670494|ref|YP_306509.1| - 8.5e-51 170.2 7.1 2.9e-19 69.1 0.1 7.1 7 0 0 7 7 7 5 PAS fold PAS_4 PF08448.10 gi|73670494|ref|YP_306509.1| - 9.5e-49 164.3 0.0 2.4e-11 43.9 0.0 5.6 5 0 0 5 5 5 5 PAS fold GAF_2 PF13185.6 gi|73670494|ref|YP_306509.1| - 2.4e-37 128.3 0.0 1.5e-19 70.7 0.0 2.9 3 0 0 3 3 3 2 GAF domain PAS_8 PF13188.7 gi|73670494|ref|YP_306509.1| - 9.6e-32 108.5 0.0 1.8e-07 31.0 0.0 5.2 5 0 0 5 5 5 4 PAS domain HisKA_2 PF07568.12 gi|73670494|ref|YP_306509.1| - 1.1e-30 105.5 0.9 6.2e-30 103.1 0.9 2.5 1 0 0 1 1 1 1 Histidine kinase PAS_10 PF13596.6 gi|73670494|ref|YP_306509.1| - 7.7e-09 36.1 0.2 8.9e-07 29.5 0.0 3.7 3 0 0 3 3 2 1 PAS domain GAF PF01590.26 gi|73670494|ref|YP_306509.1| - 9.7e-09 36.0 0.0 0.0029 18.2 0.0 2.6 2 0 0 2 2 2 2 GAF domain HATPase_c PF02518.26 gi|73670494|ref|YP_306509.1| - 1.4e-07 32.0 1.4 6.9e-07 29.8 0.2 2.7 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MEKHLA PF08670.11 gi|73670494|ref|YP_306509.1| - 1.6e-07 31.3 0.0 0.17 11.7 0.0 4.1 3 1 1 4 4 4 2 MEKHLA domain GAF_3 PF13492.6 gi|73670494|ref|YP_306509.1| - 3e-06 27.6 0.0 0.039 14.3 0.0 3.2 3 1 0 3 3 2 2 GAF domain dCache_1 PF02743.18 gi|73670494|ref|YP_306509.1| - 3.1e-05 23.9 2.5 0.54 10.0 0.0 4.8 4 0 0 4 4 4 2 Cache domain PAS_7 PF12860.7 gi|73670494|ref|YP_306509.1| - 0.00031 20.9 10.6 0.64 10.2 0.1 6.8 7 2 0 7 7 6 1 PAS fold PAS_12 PF18095.1 gi|73670494|ref|YP_306509.1| - 0.0015 18.2 1.0 0.98 9.0 0.0 4.0 4 1 0 4 4 4 1 UPF0242 C-terminal PAS-like domain Spidroin_N PF16763.5 gi|73670494|ref|YP_306509.1| - 0.0028 17.7 3.5 1.2 9.1 0.0 3.1 3 0 0 3 3 2 2 Major ampullate spidroin 1, spider silk protein 1, N-term HWE_HK PF07536.14 gi|73670494|ref|YP_306509.1| - 0.016 15.9 0.0 0.016 15.9 0.0 3.2 3 0 0 3 3 3 0 HWE histidine kinase HATPase_c_2 PF13581.6 gi|73670494|ref|YP_306509.1| - 0.03 14.3 0.0 0.081 12.9 0.0 1.8 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF3568 PF12092.8 gi|73670494|ref|YP_306509.1| - 0.033 14.3 0.0 19 5.3 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3568) DUF5344 PF17279.2 gi|73670494|ref|YP_306509.1| - 3.2 8.4 9.8 0.23 12.1 2.3 3.1 3 0 0 3 3 3 0 Family of unknown function (DUF5344) DUF3499 PF12005.8 gi|73670494|ref|YP_306509.1| - 4.2 8.0 6.8 21 5.7 0.2 3.0 3 0 0 3 3 2 0 Protein of unknown function (DUF3499) DivIC PF04977.15 gi|73670494|ref|YP_306509.1| - 8.6 6.2 20.3 0.35 10.7 4.8 4.3 3 1 0 3 3 3 0 Septum formation initiator Usp PF00582.26 gi|73670495|ref|YP_306510.1| - 2.4e-34 118.9 0.4 2.7e-34 118.7 0.4 1.0 1 0 0 1 1 1 1 Universal stress protein family ETF PF01012.21 gi|73670495|ref|YP_306510.1| - 0.043 13.7 0.7 8 6.3 0.0 2.2 1 1 0 2 2 2 0 Electron transfer flavoprotein domain DNA_photolyase PF00875.18 gi|73670495|ref|YP_306510.1| - 0.056 13.5 0.0 0.11 12.5 0.0 1.4 1 1 0 1 1 1 0 DNA photolyase GARS_N PF02844.15 gi|73670495|ref|YP_306510.1| - 0.078 13.8 0.1 0.17 12.7 0.1 1.9 1 1 0 1 1 1 0 Phosphoribosylglycinamide synthetase, N domain Peptidase_M20 PF01546.28 gi|73670496|ref|YP_306511.1| - 6.9e-16 58.6 0.1 9.7e-16 58.1 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|73670496|ref|YP_306511.1| - 0.00016 21.6 0.0 0.00036 20.4 0.0 1.7 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.14 gi|73670496|ref|YP_306511.1| - 0.04 12.9 0.0 0.77 8.7 0.0 2.7 3 0 0 3 3 3 0 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 gi|73670496|ref|YP_306511.1| - 0.075 12.7 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Peptidase family M28 CPBP PF02517.16 gi|73670497|ref|YP_306512.1| - 2.5e-10 40.6 17.5 2.5e-10 40.6 17.5 2.6 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease ASD2 PF08687.11 gi|73670498|ref|YP_306513.1| - 0.0049 16.5 2.2 0.005 16.4 2.2 1.1 1 0 0 1 1 1 1 Apx/Shroom domain ASD2 Peptidase_S55 PF05580.12 gi|73670498|ref|YP_306513.1| - 0.048 13.6 0.1 0.064 13.2 0.1 1.1 1 0 0 1 1 1 0 SpoIVB peptidase S55 HAUS2 PF15003.6 gi|73670498|ref|YP_306513.1| - 0.12 12.1 3.1 0.27 11.0 2.1 1.7 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 2 Nucleoside_tran PF01733.18 gi|73670498|ref|YP_306513.1| - 0.19 11.1 0.3 0.23 10.8 0.3 1.0 1 0 0 1 1 1 0 Nucleoside transporter Putative_PNPOx PF01243.20 gi|73670500|ref|YP_306515.1| - 4.5e-07 30.0 0.0 6.2e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase malic PF00390.19 gi|73670501|ref|YP_306516.1| - 6.9e-32 110.7 0.1 1.7e-29 102.9 0.1 2.4 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|73670501|ref|YP_306516.1| - 2.5e-25 89.2 0.7 3.9e-24 85.3 0.7 2.2 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain ELFV_dehydrog PF00208.21 gi|73670501|ref|YP_306516.1| - 0.0006 19.6 0.2 0.011 15.5 0.1 2.2 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ThiF PF00899.21 gi|73670501|ref|YP_306516.1| - 0.086 12.2 0.2 0.2 11.0 0.2 1.6 1 0 0 1 1 1 0 ThiF family Prok-JAB PF14464.6 gi|73670502|ref|YP_306517.1| - 3.3e-08 33.3 0.0 4.4e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.15 gi|73670502|ref|YP_306517.1| - 0.045 13.7 0.0 0.074 13.0 0.0 1.5 1 1 0 1 1 1 0 RadC-like JAB domain BssC_TutF PF08201.11 gi|73670503|ref|YP_306518.1| - 0.038 14.0 2.1 0.067 13.2 1.8 1.7 1 1 0 1 1 1 0 BssC/TutF protein Y1_Tnp PF01797.16 gi|73670504|ref|YP_306519.1| - 2.4e-19 69.6 1.8 2.8e-19 69.4 1.8 1.1 1 0 0 1 1 1 1 Transposase IS200 like OrfB_IS605 PF01385.19 gi|73670505|ref|YP_306520.1| - 2.6e-26 92.2 1.2 5.9e-26 91.1 1.2 1.5 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73670505|ref|YP_306520.1| - 2.8e-23 81.6 0.4 6e-23 80.6 0.4 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73670505|ref|YP_306520.1| - 5.7e-21 73.7 0.5 1.1e-20 72.8 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73670505|ref|YP_306520.1| - 0.0028 17.8 1.6 0.0054 16.8 0.5 1.9 2 0 0 2 2 2 1 Piccolo Zn-finger LemA PF04011.12 gi|73670505|ref|YP_306520.1| - 0.016 15.1 1.1 3.2 7.6 0.3 2.3 2 0 0 2 2 2 0 LemA family HypA PF01155.19 gi|73670505|ref|YP_306520.1| - 0.16 12.0 0.0 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|73670505|ref|YP_306520.1| - 0.16 12.0 0.5 0.3 11.1 0.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_10 PF10058.9 gi|73670505|ref|YP_306520.1| - 0.28 11.0 1.3 0.57 10.0 1.3 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn_Tnp_IS1595 PF12760.7 gi|73670505|ref|YP_306520.1| - 0.29 11.1 2.0 0.53 10.3 2.0 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-RanBP PF00641.18 gi|73670505|ref|YP_306520.1| - 1.7 8.0 6.8 9.6 5.6 0.2 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Pcc1 PF09341.10 gi|73670506|ref|YP_306521.1| - 4.7e-11 42.7 0.3 5.6e-11 42.4 0.3 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 HTH_45 PF14947.6 gi|73670508|ref|YP_306523.1| - 1.2e-06 28.4 1.1 3.4e-05 23.7 1.1 2.7 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_20 PF12840.7 gi|73670508|ref|YP_306523.1| - 0.00029 20.8 0.0 0.00066 19.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|73670508|ref|YP_306523.1| - 0.0023 17.7 0.1 0.008 16.0 0.1 2.0 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF2408 PF10303.9 gi|73670508|ref|YP_306523.1| - 1.3 9.6 7.2 0.41 11.2 1.4 2.6 1 1 0 2 2 2 0 Protein of unknown function (DUF2408) DUF2284 PF10050.9 gi|73670509|ref|YP_306524.1| - 1.4e-43 148.5 0.0 1.9e-43 148.1 0.0 1.2 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) T4_deiodinase PF00837.17 gi|73670509|ref|YP_306524.1| - 0.038 13.3 0.0 0.059 12.7 0.0 1.2 1 0 0 1 1 1 0 Iodothyronine deiodinase NTPase_1 PF03266.15 gi|73670510|ref|YP_306525.1| - 4.6e-53 179.6 0.4 5.2e-53 179.4 0.4 1.0 1 0 0 1 1 1 1 NTPase DUF2478 PF10649.9 gi|73670510|ref|YP_306525.1| - 9.5e-09 35.0 0.3 1.3e-08 34.6 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2478) AAA_18 PF13238.6 gi|73670510|ref|YP_306525.1| - 1.3e-05 25.8 0.0 2.3e-05 25.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|73670510|ref|YP_306525.1| - 9e-05 22.8 0.1 0.00026 21.3 0.0 1.7 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|73670510|ref|YP_306525.1| - 0.00028 21.3 1.1 0.001 19.5 1.1 1.9 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|73670510|ref|YP_306525.1| - 0.00047 19.2 0.9 0.00081 18.4 0.3 1.7 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_30 PF13604.6 gi|73670510|ref|YP_306525.1| - 0.0024 17.6 3.0 0.0059 16.3 2.4 2.2 1 1 1 2 2 2 1 AAA domain SRP54 PF00448.22 gi|73670510|ref|YP_306525.1| - 0.0025 17.5 0.7 0.036 13.7 0.7 2.1 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain AAA PF00004.29 gi|73670510|ref|YP_306525.1| - 0.0029 18.0 0.2 0.0048 17.3 0.2 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|73670510|ref|YP_306525.1| - 0.0042 17.1 0.1 0.12 12.4 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73670510|ref|YP_306525.1| - 0.0044 17.4 0.3 0.0082 16.5 0.3 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 gi|73670510|ref|YP_306525.1| - 0.0051 16.5 0.4 0.023 14.4 0.4 2.0 1 1 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 gi|73670510|ref|YP_306525.1| - 0.0083 16.0 0.1 0.017 15.0 0.0 1.5 1 1 0 1 1 1 1 Helicase IstB_IS21 PF01695.17 gi|73670510|ref|YP_306525.1| - 0.015 15.0 0.2 1.2 8.9 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein KTI12 PF08433.10 gi|73670510|ref|YP_306525.1| - 0.016 14.7 0.1 0.86 9.0 0.0 2.1 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AGT PF11440.8 gi|73670510|ref|YP_306525.1| - 0.049 12.7 0.1 0.066 12.3 0.1 1.1 1 0 0 1 1 1 0 DNA alpha-glucosyltransferase MMR_HSR1 PF01926.23 gi|73670510|ref|YP_306525.1| - 0.061 13.4 0.7 0.19 11.8 0.7 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase PTS_IIB PF02302.17 gi|73670510|ref|YP_306525.1| - 0.094 13.4 0.5 0.33 11.7 0.1 2.1 2 1 1 3 3 2 0 PTS system, Lactose/Cellobiose specific IIB subunit AAA_19 PF13245.6 gi|73670510|ref|YP_306525.1| - 0.1 12.9 3.2 2.1 8.6 2.9 2.4 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|73670510|ref|YP_306525.1| - 0.15 12.0 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|73670510|ref|YP_306525.1| - 0.16 12.1 0.2 0.57 10.3 0.1 1.8 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|73670510|ref|YP_306525.1| - 0.25 11.1 0.8 0.7 9.6 0.1 1.9 2 1 0 2 2 2 0 Viral (Superfamily 1) RNA helicase MMR_HSR1 PF01926.23 gi|73670511|ref|YP_306526.1| - 2.8e-17 62.8 1.5 2.6e-13 50.0 0.1 2.4 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|73670511|ref|YP_306526.1| - 8.6e-10 38.4 3.8 0.00017 21.1 0.3 2.4 2 1 0 2 2 2 2 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|73670511|ref|YP_306526.1| - 3.6e-09 36.7 2.6 1.2e-08 35.0 2.6 1.8 1 1 0 1 1 1 1 RsgA GTPase GTP_EFTU PF00009.27 gi|73670511|ref|YP_306526.1| - 4.9e-07 29.5 2.2 9.2e-05 22.1 0.2 2.7 1 1 0 2 2 2 2 Elongation factor Tu GTP binding domain AIG1 PF04548.16 gi|73670511|ref|YP_306526.1| - 0.00013 21.4 0.3 0.00028 20.3 0.1 1.7 2 0 0 2 2 2 1 AIG1 family Dynamin_N PF00350.23 gi|73670511|ref|YP_306526.1| - 0.00042 20.4 1.8 5.2 7.1 0.2 3.3 2 1 1 3 3 3 2 Dynamin family MMR_HSR1_Xtn PF16897.5 gi|73670511|ref|YP_306526.1| - 0.0008 19.4 0.5 0.0023 17.9 0.1 1.9 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain MeaB PF03308.16 gi|73670511|ref|YP_306526.1| - 0.02 13.9 1.5 1.9 7.4 0.3 2.3 1 1 1 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|73670511|ref|YP_306526.1| - 0.024 14.2 1.8 0.026 14.1 0.2 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain dCMP_cyt_deam_1 PF00383.23 gi|73670513|ref|YP_306528.1| - 1.6e-25 88.9 0.0 2.2e-25 88.5 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|73670513|ref|YP_306528.1| - 2.2e-21 76.1 0.0 2.5e-21 75.9 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase SNAD4 PF18750.1 gi|73670513|ref|YP_306528.1| - 0.00069 19.7 0.2 0.0011 19.0 0.2 1.3 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 NAD2 PF18782.1 gi|73670513|ref|YP_306528.1| - 0.047 13.8 0.0 0.072 13.2 0.0 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 APOBEC3 PF18771.1 gi|73670513|ref|YP_306528.1| - 0.049 13.8 0.0 0.069 13.3 0.0 1.3 1 0 0 1 1 1 0 APOBEC3 APOBEC2 PF18772.1 gi|73670513|ref|YP_306528.1| - 0.057 13.5 0.2 0.092 12.8 0.0 1.4 2 0 0 2 2 2 0 APOBEC2 NAD1 PF18778.1 gi|73670513|ref|YP_306528.1| - 0.096 12.8 0.7 0.13 12.3 0.1 1.5 2 0 0 2 2 2 0 Novel AID APOBEC clade 1 DUF2162 PF09930.9 gi|73670513|ref|YP_306528.1| - 0.13 11.6 0.1 0.18 11.2 0.1 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) Bd3614-deam PF14439.6 gi|73670513|ref|YP_306528.1| - 0.56 10.3 4.7 29 4.7 4.7 2.2 1 1 0 1 1 1 0 Bd3614-like deaminase Epiglycanin_C PF14654.6 gi|73670515|ref|YP_306530.1| - 0.12 12.4 1.6 0.15 12.1 1.6 1.2 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region DUF3149 PF11346.8 gi|73670515|ref|YP_306530.1| - 0.26 11.0 8.6 0.76 9.4 8.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3149) I-set PF07679.16 gi|73670516|ref|YP_306531.1| - 0.0018 18.3 2.2 3 8.0 0.0 4.3 2 2 0 3 3 3 2 Immunoglobulin I-set domain CarboxypepD_reg PF13620.6 gi|73670516|ref|YP_306531.1| - 0.019 15.2 3.8 0.96 9.8 0.2 3.4 3 0 0 3 3 3 0 Carboxypeptidase regulatory-like domain TPR_1 PF00515.28 gi|73670517|ref|YP_306532.1| - 3.5e-41 137.4 2.4 2.2e-07 30.4 0.0 7.1 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670517|ref|YP_306532.1| - 4.2e-41 135.8 8.1 1.3e-06 28.0 0.0 7.2 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670517|ref|YP_306532.1| - 6.5e-31 106.7 0.1 2.5e-09 37.6 0.0 4.7 3 1 0 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670517|ref|YP_306532.1| - 6.7e-31 103.9 3.1 1.5e-06 28.0 0.4 7.1 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73670517|ref|YP_306532.1| - 3.7e-29 99.0 0.3 7.7e-07 29.1 0.0 6.9 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670517|ref|YP_306532.1| - 1.4e-26 92.4 0.0 2e-07 31.0 0.0 4.3 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670517|ref|YP_306532.1| - 4.1e-25 87.2 0.0 7.1e-07 28.8 0.0 6.0 3 2 3 6 6 6 4 TPR repeat TPR_19 PF14559.6 gi|73670517|ref|YP_306532.1| - 1.9e-23 82.7 0.6 2.6e-06 27.9 0.0 4.2 3 1 1 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670517|ref|YP_306532.1| - 4e-23 80.1 4.1 0.00027 21.5 0.1 7.2 1 1 6 7 7 7 6 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670517|ref|YP_306532.1| - 2.4e-18 66.2 1.5 1.8e-05 24.9 0.0 4.8 4 1 1 5 5 5 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670517|ref|YP_306532.1| - 4.9e-16 58.7 0.1 7.9e-06 26.0 0.0 4.1 2 2 2 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|73670517|ref|YP_306532.1| - 2.8e-15 55.8 0.5 0.034 14.8 0.0 6.4 6 0 0 6 6 6 3 Tetratricopeptide repeat NARP1 PF12569.8 gi|73670517|ref|YP_306532.1| - 9.3e-08 31.4 0.7 0.066 12.1 0.0 3.3 1 1 1 3 3 3 3 NMDA receptor-regulated protein 1 TPR_7 PF13176.6 gi|73670517|ref|YP_306532.1| - 1.1e-07 31.4 0.3 1.2 9.4 0.1 5.7 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_15 PF13429.6 gi|73670517|ref|YP_306532.1| - 3.3e-06 26.5 1.6 0.72 9.0 0.0 4.0 2 2 1 4 4 4 3 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|73670517|ref|YP_306532.1| - 4.7e-06 26.6 0.5 0.27 11.3 0.3 3.3 1 1 2 3 3 3 2 Putative TPR-like repeat TPR_21 PF09976.9 gi|73670517|ref|YP_306532.1| - 2.2e-05 24.3 0.2 0.54 9.9 0.1 4.1 1 1 4 5 5 5 2 Tetratricopeptide repeat-like domain TPR_20 PF14561.6 gi|73670517|ref|YP_306532.1| - 0.00018 21.8 0.0 3.9 7.9 0.0 3.5 2 1 1 3 3 3 2 Tetratricopeptide repeat DUF3808 PF10300.9 gi|73670517|ref|YP_306532.1| - 0.0012 17.7 0.2 0.19 10.5 0.3 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3808) Fis1_TPR_C PF14853.6 gi|73670517|ref|YP_306532.1| - 0.005 16.9 6.4 0.74 9.9 0.1 4.7 5 1 1 6 6 5 1 Fis1 C-terminal tetratricopeptide repeat TPR_4 PF07721.14 gi|73670517|ref|YP_306532.1| - 0.0053 17.3 0.0 70 4.5 0.1 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73670517|ref|YP_306532.1| - 0.0054 16.1 0.2 5 6.4 0.0 3.2 2 2 1 3 3 3 1 MalT-like TPR region TPR_10 PF13374.6 gi|73670517|ref|YP_306532.1| - 0.013 15.3 5.9 40 4.3 0.1 5.9 7 0 0 7 7 7 0 Tetratricopeptide repeat DUF4810 PF16068.5 gi|73670517|ref|YP_306532.1| - 0.029 14.9 1.6 6 7.5 0.0 3.7 3 1 1 4 4 3 0 Domain of unknown function (DUF4810) RPN7 PF10602.9 gi|73670517|ref|YP_306532.1| - 0.032 13.9 0.8 0.47 10.1 0.4 2.9 2 1 2 4 4 4 0 26S proteasome subunit RPN7 SRP19 PF01922.17 gi|73670517|ref|YP_306532.1| - 0.036 15.0 0.0 7.8 7.5 0.0 3.2 1 1 2 3 3 3 0 SRP19 protein ChAPs PF09295.10 gi|73670517|ref|YP_306532.1| - 0.057 12.4 0.0 5.2 5.9 0.0 2.7 1 1 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) TFR_dimer PF04253.15 gi|73670517|ref|YP_306532.1| - 0.073 13.2 3.3 1 9.4 0.2 2.5 2 0 0 2 2 2 0 Transferrin receptor-like dimerisation domain Alkyl_sulf_dimr PF14863.6 gi|73670517|ref|YP_306532.1| - 0.12 12.9 0.1 12 6.3 0.1 2.5 2 1 0 2 2 2 0 Alkyl sulfatase dimerisation BTAD PF03704.17 gi|73670517|ref|YP_306532.1| - 0.13 12.7 2.4 20 5.6 0.0 2.9 2 2 1 3 3 3 0 Bacterial transcriptional activator domain CPBP PF02517.16 gi|73670518|ref|YP_306533.1| - 0.00045 20.5 11.6 0.00045 20.5 11.6 2.3 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease PGF-CTERM PF18204.1 gi|73670519|ref|YP_306534.1| - 0.055 13.5 0.1 0.055 13.5 0.1 2.1 2 0 0 2 2 2 0 PGF-CTERM motif AI-2E_transport PF01594.16 gi|73670520|ref|YP_306535.1| - 3.3e-48 164.5 43.9 3.8e-48 164.3 43.9 1.0 1 0 0 1 1 1 1 AI-2E family transporter TMEM100 PF16311.5 gi|73670520|ref|YP_306535.1| - 6.3e-05 22.6 0.8 0.079 12.5 0.1 2.5 2 0 0 2 2 2 2 Transmembrane protein 100 EI24 PF07264.11 gi|73670520|ref|YP_306535.1| - 0.013 15.7 7.4 0.013 15.7 7.4 2.3 1 1 1 2 2 2 0 Etoposide-induced protein 2.4 (EI24) DUF945 PF06097.11 gi|73670520|ref|YP_306535.1| - 0.087 11.9 0.2 0.12 11.4 0.2 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF945) DUF389 PF04087.14 gi|73670521|ref|YP_306536.1| - 5.8e-36 123.6 18.7 6.9e-36 123.4 15.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF389) DUF1269 PF06897.12 gi|73670521|ref|YP_306536.1| - 0.79 10.1 7.1 5.6 7.3 3.9 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1269) AI-2E_transport PF01594.16 gi|73670522|ref|YP_306537.1| - 2.1e-42 145.5 39.9 2.4e-42 145.3 39.9 1.0 1 0 0 1 1 1 1 AI-2E family transporter Glyco_trans_4_2 PF13477.6 gi|73670522|ref|YP_306537.1| - 0.099 12.7 0.3 0.27 11.3 0.0 1.8 2 1 0 2 2 2 0 Glycosyl transferase 4-like DUF1269 PF06897.12 gi|73670523|ref|YP_306538.1| - 2.4e-08 34.2 1.9 4.1e-08 33.4 1.9 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1269) DUF1269 PF06897.12 gi|73670524|ref|YP_306539.1| - 8.3e-36 122.3 0.6 1.2e-35 121.8 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1269) DUF456 PF04306.13 gi|73670524|ref|YP_306539.1| - 0.0018 18.6 2.8 0.0025 18.1 2.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF456) Gly-zipper_YMGG PF13441.6 gi|73670524|ref|YP_306539.1| - 0.0084 15.8 5.5 0.038 13.7 5.5 2.0 1 1 0 1 1 1 1 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 gi|73670524|ref|YP_306539.1| - 0.033 14.2 4.3 0.077 13.0 4.3 1.6 1 1 0 1 1 1 0 Glycine zipper Gly-zipper_OmpA PF13436.6 gi|73670524|ref|YP_306539.1| - 0.072 12.9 6.1 2 8.2 0.2 2.5 2 0 0 2 2 2 0 Glycine-zipper domain CytB6-F_Fe-S PF08802.10 gi|73670524|ref|YP_306539.1| - 0.081 13.0 6.3 0.69 10.0 0.0 3.3 3 0 0 3 3 3 0 Cytochrome B6-F complex Fe-S subunit Bacteriocin_IIc PF10439.9 gi|73670524|ref|YP_306539.1| - 0.79 9.9 6.0 1.5 9.0 6.0 1.4 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Rick_17kDa_Anti PF05433.15 gi|73670524|ref|YP_306539.1| - 5.1 7.0 7.8 0.77 9.7 0.9 2.2 2 0 0 2 2 2 0 Glycine zipper 2TM domain Na_H_Exchanger PF00999.21 gi|73670525|ref|YP_306540.1| - 7.9e-37 126.9 45.9 9.7e-37 126.6 45.9 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF4235 PF14019.6 gi|73670525|ref|YP_306540.1| - 0.21 11.7 3.4 0.89 9.7 3.4 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4235) MS_channel PF00924.18 gi|73670526|ref|YP_306541.1| - 3.7e-41 140.9 3.3 7.2e-41 140.0 3.3 1.5 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF1129 PF06570.11 gi|73670526|ref|YP_306541.1| - 1.1 8.7 6.8 2.2 7.7 5.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF1269 PF06897.12 gi|73670527|ref|YP_306542.1| - 1.5e-37 127.8 0.7 2.2e-37 127.3 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1269) Gly-zipper_YMGG PF13441.6 gi|73670527|ref|YP_306542.1| - 0.00013 21.6 3.9 0.00028 20.6 3.9 1.4 1 0 0 1 1 1 1 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 gi|73670527|ref|YP_306542.1| - 0.003 17.5 6.7 0.0051 16.8 6.7 1.3 1 0 0 1 1 1 1 Glycine zipper DUF456 PF04306.13 gi|73670527|ref|YP_306542.1| - 0.0096 16.2 4.3 0.014 15.7 4.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF456) DUF3482 PF11981.8 gi|73670527|ref|YP_306542.1| - 0.059 12.8 0.1 0.061 12.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Rick_17kDa_Anti PF05433.15 gi|73670527|ref|YP_306542.1| - 0.067 13.1 1.5 0.067 13.1 1.5 2.1 2 0 0 2 2 2 0 Glycine zipper 2TM domain CytB6-F_Fe-S PF08802.10 gi|73670527|ref|YP_306542.1| - 0.078 13.0 4.3 19 5.4 0.3 3.2 3 0 0 3 3 3 0 Cytochrome B6-F complex Fe-S subunit Gly-zipper_OmpA PF13436.6 gi|73670527|ref|YP_306542.1| - 0.092 12.5 10.6 0.38 10.6 10.3 2.0 1 1 0 1 1 1 0 Glycine-zipper domain Bacteriocin_IIc PF10439.9 gi|73670527|ref|YP_306542.1| - 0.25 11.5 6.9 0.44 10.7 6.9 1.3 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Sulfatase PF00884.23 gi|73670528|ref|YP_306543.1| - 6.1e-93 311.6 0.0 7.7e-93 311.3 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|73670528|ref|YP_306543.1| - 1.1e-07 31.8 0.0 0.00015 21.5 0.0 2.4 2 1 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase LOR PF04525.12 gi|73670529|ref|YP_306544.1| - 3.3e-07 30.1 0.0 3.7e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 LURP-one-related DUF1254 PF06863.12 gi|73670531|ref|YP_306546.1| - 9.1e-34 116.4 0.0 1.7e-33 115.5 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1254) DUF1214 PF06742.11 gi|73670531|ref|YP_306546.1| - 3.3e-32 111.2 0.3 5.7e-32 110.4 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1214) DEK_C PF08766.11 gi|73670531|ref|YP_306546.1| - 0.15 12.0 0.3 0.26 11.2 0.3 1.4 1 0 0 1 1 1 0 DEK C terminal domain Na_H_Exchanger PF00999.21 gi|73670532|ref|YP_306547.1| - 3.4e-16 59.0 9.2 3.8e-16 58.8 9.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Radical_SAM PF04055.21 gi|73670533|ref|YP_306548.1| - 5.3e-15 56.2 0.0 8.6e-15 55.5 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SEC-C PF02810.15 gi|73670533|ref|YP_306548.1| - 1.6e-10 40.7 5.9 1.6e-10 40.7 5.9 1.7 2 0 0 2 2 2 1 SEC-C motif SPASM PF13186.6 gi|73670533|ref|YP_306548.1| - 9.4e-07 29.3 0.5 2.7e-06 27.8 0.5 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|73670533|ref|YP_306548.1| - 1e-05 25.8 0.0 2.3e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73670533|ref|YP_306548.1| - 0.021 14.9 0.0 0.044 13.9 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain Sulfatase PF00884.23 gi|73670534|ref|YP_306549.1| - 7.1e-60 203.0 0.0 1.2e-59 202.3 0.0 1.4 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 gi|73670534|ref|YP_306549.1| - 4.5e-06 27.4 0.0 8.4e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of aryl-sulfatase Phosphodiest PF01663.22 gi|73670534|ref|YP_306549.1| - 0.00024 20.8 0.0 0.009 15.6 0.0 2.2 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase LOR PF04525.12 gi|73670535|ref|YP_306550.1| - 2.2e-19 69.8 0.1 4e-19 68.9 0.1 1.6 1 1 0 1 1 1 1 LURP-one-related FlgD_ig PF13860.6 gi|73670535|ref|YP_306550.1| - 0.14 12.0 0.1 20 5.2 0.0 2.5 2 1 0 2 2 2 0 FlgD Ig-like domain Lip_prot_lig_C PF10437.9 gi|73670536|ref|YP_306551.1| - 0.13 12.3 0.5 48 4.0 0.1 3.3 3 1 0 3 3 3 0 Bacterial lipoate protein ligase C-terminus DUF874 PF05917.11 gi|73670536|ref|YP_306551.1| - 0.24 10.4 0.1 0.33 9.9 0.1 1.1 1 0 0 1 1 1 0 Helicobacter pylori protein of unknown function (DUF874) DnaB_2 PF07261.11 gi|73670536|ref|YP_306551.1| - 0.57 9.9 5.8 12 5.7 0.7 3.1 2 1 1 3 3 3 0 Replication initiation and membrane attachment Jiraiya PF15038.6 gi|73670536|ref|YP_306551.1| - 0.62 9.5 5.4 0.37 10.2 0.5 2.3 3 0 0 3 3 3 0 Jiraiya DUF3139 PF11337.8 gi|73670536|ref|YP_306551.1| - 0.83 10.3 8.9 0.41 11.3 2.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) TPR_1 PF00515.28 gi|73670537|ref|YP_306552.1| - 2e-07 30.5 0.8 0.0053 16.5 0.1 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670537|ref|YP_306552.1| - 2.2e-07 30.6 1.1 0.018 15.2 0.1 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73670537|ref|YP_306552.1| - 1.7e-06 28.0 0.1 3.8e-05 23.8 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670537|ref|YP_306552.1| - 2.7e-06 27.6 0.4 6.1e-05 23.2 0.4 2.0 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670537|ref|YP_306552.1| - 6.3e-06 25.9 0.8 0.034 14.3 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670537|ref|YP_306552.1| - 8.4e-06 25.5 0.2 0.0074 16.1 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670537|ref|YP_306552.1| - 0.00015 21.4 0.0 0.00031 20.3 0.0 1.5 2 0 0 2 2 2 1 TPR repeat TPR_16 PF13432.6 gi|73670537|ref|YP_306552.1| - 0.0027 18.3 0.0 0.0032 18.1 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670537|ref|YP_306552.1| - 0.0052 16.7 0.2 1.3 9.2 0.0 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_21 PF09976.9 gi|73670537|ref|YP_306552.1| - 0.0069 16.1 0.8 0.97 9.1 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat-like domain Coatomer_E PF04733.14 gi|73670537|ref|YP_306552.1| - 0.0083 15.6 0.1 0.0088 15.5 0.1 1.0 1 0 0 1 1 1 1 Coatomer epsilon subunit TPR_19 PF14559.6 gi|73670537|ref|YP_306552.1| - 0.012 16.1 0.1 0.017 15.6 0.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat BTAD PF03704.17 gi|73670537|ref|YP_306552.1| - 0.065 13.7 0.0 14 6.1 0.0 2.0 2 0 0 2 2 2 0 Bacterial transcriptional activator domain TPR_14 PF13428.6 gi|73670537|ref|YP_306552.1| - 0.082 13.8 0.1 0.7 10.9 0.0 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73670537|ref|YP_306552.1| - 0.099 13.3 0.5 4.3 8.2 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat VCBS PF13517.6 gi|73670538|ref|YP_306553.1| - 4.5e-09 36.8 14.3 2.7 8.6 0.0 7.4 7 0 0 7 7 7 5 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella PHTB1_N PF14727.6 gi|73670538|ref|YP_306553.1| - 5e-05 22.8 0.0 13 5.0 0.0 5.2 5 1 1 6 6 6 3 PTHB1 N-terminus DUF346 PF03984.13 gi|73670538|ref|YP_306553.1| - 0.021 14.6 23.2 14 5.5 0.3 6.9 6 0 0 6 6 6 0 Repeat of unknown function (DUF346) DUF3786 PF12654.7 gi|73670538|ref|YP_306553.1| - 0.13 11.9 0.7 1.3e+02 2.0 0.0 3.9 4 0 0 4 4 4 0 Domain of unknown function (DUF3786) HAD PF12710.7 gi|73670539|ref|YP_306554.1| - 2.6e-12 47.6 0.0 7.7e-12 46.0 0.0 1.7 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase GFRP PF06399.13 gi|73670539|ref|YP_306554.1| - 0.14 12.0 0.0 0.75 9.7 0.0 2.2 2 0 0 2 2 2 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) DUF4096 PF13340.6 gi|73670540|ref|YP_306555.1| - 7.5e-22 77.3 0.0 9.4e-22 77.0 0.0 1.1 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1_2 PF13586.6 gi|73670541|ref|YP_306556.1| - 2.3e-13 50.3 1.2 2.7e-13 50.1 1.2 1.0 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 gi|73670541|ref|YP_306556.1| - 0.032 13.9 0.9 0.032 13.9 0.9 1.2 1 0 0 1 1 1 0 Transposase DDE domain Pentapeptide PF00805.22 gi|73670542|ref|YP_306557.1| - 7.8e-34 114.9 13.2 2.7e-12 46.1 1.3 3.5 3 0 0 3 3 3 3 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|73670542|ref|YP_306557.1| - 4e-12 46.1 0.1 6.7e-09 35.8 0.0 2.3 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|73670542|ref|YP_306557.1| - 1.1e-07 31.9 0.0 8e-05 22.7 0.0 3.4 1 1 2 3 3 3 2 Pentapeptide repeats (9 copies) DNA_ligase_OB PF03120.16 gi|73670542|ref|YP_306557.1| - 0.051 13.5 0.1 2.2 8.3 0.0 2.7 1 1 1 2 2 2 0 NAD-dependent DNA ligase OB-fold domain PspC PF04024.12 gi|73670542|ref|YP_306557.1| - 0.17 11.7 1.6 0.38 10.6 0.1 2.1 2 0 0 2 2 2 0 PspC domain ResIII PF04851.15 gi|73670543|ref|YP_306558.1| - 2e-06 27.9 0.0 2.6e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_16 PF13191.6 gi|73670543|ref|YP_306558.1| - 0.1 12.9 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|73670543|ref|YP_306558.1| - 0.19 12.3 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 ABC transporter MarC PF01914.17 gi|73670544|ref|YP_306559.1| - 2.3e-38 131.6 8.5 2.5e-38 131.5 8.5 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DUF3139 PF11337.8 gi|73670544|ref|YP_306559.1| - 0.36 11.5 4.1 0.56 10.9 2.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DNA_ligase_ZBD PF03119.16 gi|73670545|ref|YP_306560.1| - 0.00026 21.0 0.1 0.79 9.8 0.0 2.2 2 0 0 2 2 2 2 NAD-dependent DNA ligase C4 zinc finger domain DZR PF12773.7 gi|73670545|ref|YP_306560.1| - 0.0043 17.1 1.4 0.0082 16.2 1.4 1.5 1 1 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|73670545|ref|YP_306560.1| - 0.0052 16.2 1.2 1.6 8.2 0.2 2.1 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|73670545|ref|YP_306560.1| - 0.0053 16.4 4.6 0.81 9.5 0.2 2.1 2 0 0 2 2 2 2 zinc-ribbon domain RecR PF02132.15 gi|73670545|ref|YP_306560.1| - 0.0055 16.2 0.8 0.31 10.6 0.0 2.1 1 1 1 2 2 2 1 RecR protein Nudix_N_2 PF14803.6 gi|73670545|ref|YP_306560.1| - 0.0059 16.5 0.7 2.3 8.2 0.1 2.1 2 0 0 2 2 2 2 Nudix N-terminal zf-C3HC4_3 PF13920.6 gi|73670545|ref|YP_306560.1| - 0.023 14.5 0.4 0.028 14.3 0.4 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Cys_rich_KTR PF14205.6 gi|73670545|ref|YP_306560.1| - 0.024 14.4 2.1 0.5 10.2 0.1 2.1 2 0 0 2 2 2 0 Cysteine-rich KTR DUF35_N PF12172.8 gi|73670545|ref|YP_306560.1| - 0.036 14.0 1.2 1.6 8.7 0.3 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) UPF0547 PF10571.9 gi|73670545|ref|YP_306560.1| - 0.04 14.0 4.8 2.2 8.4 0.3 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 OrfB_Zn_ribbon PF07282.11 gi|73670545|ref|YP_306560.1| - 0.041 13.8 0.5 0.072 13.0 0.5 1.4 1 1 0 1 1 1 0 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.12 gi|73670545|ref|YP_306560.1| - 0.067 12.7 4.0 0.13 11.8 4.0 1.5 1 1 0 1 1 1 0 TFIIB zinc-binding Cys_rich_CPCC PF14206.6 gi|73670545|ref|YP_306560.1| - 0.22 11.4 2.7 0.34 10.8 0.3 1.5 1 1 0 1 1 1 0 Cysteine-rich CPCC zinc_ribbon_15 PF17032.5 gi|73670545|ref|YP_306560.1| - 0.24 12.2 3.5 0.43 11.4 3.5 1.4 1 1 0 1 1 1 0 zinc-ribbon family zf-TFIIB PF13453.6 gi|73670545|ref|YP_306560.1| - 0.78 9.1 4.7 3.3 7.1 4.5 1.9 1 1 1 2 2 2 0 Transcription factor zinc-finger DUF3797 PF12677.7 gi|73670545|ref|YP_306560.1| - 8.2 6.4 7.8 2.6 8.0 0.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) PPDK_N PF01326.19 gi|73670546|ref|YP_306561.1| - 1.5e-113 379.4 0.0 2.6e-113 378.6 0.0 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|73670546|ref|YP_306561.1| - 9.6e-59 198.9 0.0 1.6e-58 198.2 0.0 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|73670546|ref|YP_306561.1| - 5.7e-26 90.0 0.4 1.9e-25 88.4 0.4 2.0 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain EamA PF00892.20 gi|73670547|ref|YP_306562.1| - 2.1e-30 105.7 28.6 9.1e-17 61.5 6.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|73670547|ref|YP_306562.1| - 4.1e-06 26.4 3.3 1.5e-05 24.5 3.3 1.8 1 1 0 1 1 1 1 Triose-phosphate Transporter family DUF2105 PF09878.9 gi|73670547|ref|YP_306562.1| - 0.013 15.3 2.8 0.023 14.4 2.5 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2105) YwiC PF14256.6 gi|73670547|ref|YP_306562.1| - 0.02 15.2 2.0 0.02 15.2 2.0 2.7 1 1 2 3 3 3 0 YwiC-like protein DUF2070 PF09843.9 gi|73670547|ref|YP_306562.1| - 0.067 11.5 22.3 0.011 14.0 12.1 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) ERGIC_N PF13850.6 gi|73670549|ref|YP_306564.1| - 0.71 10.3 0.0 0.71 10.3 0.0 2.9 3 0 0 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ATP-synt PF00231.19 gi|73670550|ref|YP_306565.1| - 1e-58 199.3 0.0 1.1e-58 199.1 0.0 1.0 1 0 0 1 1 1 1 ATP synthase ATP-synt_ab PF00006.25 gi|73670551|ref|YP_306566.1| - 8.9e-68 228.1 0.0 1.2e-67 227.7 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 gi|73670551|ref|YP_306566.1| - 7.4e-36 123.3 0.0 1.5e-35 122.3 0.0 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 gi|73670551|ref|YP_306566.1| - 6.2e-05 23.4 0.1 0.00014 22.3 0.1 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain ATPase PF06745.13 gi|73670551|ref|YP_306566.1| - 0.0052 16.2 0.0 0.0098 15.3 0.0 1.4 1 0 0 1 1 1 1 KaiC ATP-synt_B PF00430.18 gi|73670552|ref|YP_306567.1| - 1.1e-14 54.7 13.9 1.1e-14 54.7 13.9 4.4 3 1 2 5 5 5 1 ATP synthase B/B' CF(0) DUF4834 PF16118.5 gi|73670552|ref|YP_306567.1| - 0.16 13.0 0.2 0.16 13.0 0.2 4.6 2 2 0 2 2 2 0 Domain of unknown function (DUF4834) ATP-synt_C PF00137.21 gi|73670553|ref|YP_306568.1| - 2.1e-12 47.2 10.8 2.7e-12 46.8 10.8 1.3 1 0 0 1 1 1 1 ATP synthase subunit C DUF1180 PF06679.12 gi|73670553|ref|YP_306568.1| - 0.065 13.7 0.9 0.074 13.5 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) DUF4220 PF13968.6 gi|73670553|ref|YP_306568.1| - 0.11 11.9 0.8 0.11 11.8 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) ATP-synt_A PF00119.20 gi|73670554|ref|YP_306569.1| - 1.7e-44 152.3 13.7 2e-44 152.1 13.7 1.0 1 0 0 1 1 1 1 ATP synthase A chain AtpR PF12966.7 gi|73670555|ref|YP_306570.1| - 5.5e-30 103.7 10.4 6.8e-30 103.4 10.4 1.0 1 0 0 1 1 1 1 N-ATPase, AtpR subunit FixS PF03597.15 gi|73670555|ref|YP_306570.1| - 0.05 13.3 3.5 0.05 13.3 3.5 2.5 3 0 0 3 3 3 0 Cytochrome oxidase maturation protein cbb3-type TraQ PF09679.10 gi|73670555|ref|YP_306570.1| - 0.068 13.1 1.3 0.12 12.3 0.6 1.8 1 1 1 2 2 2 0 Type-F conjugative transfer system pilin chaperone (TraQ) DUF2157 PF09925.9 gi|73670555|ref|YP_306570.1| - 0.12 12.1 4.6 0.16 11.8 4.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Vma12 PF11712.8 gi|73670555|ref|YP_306570.1| - 0.54 10.3 1.5 0.79 9.8 1.5 1.4 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF4131 PF13567.6 gi|73670555|ref|YP_306570.1| - 9.1 5.9 8.4 1.4e+02 2.0 8.4 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) ATPase_gene1 PF09527.10 gi|73670556|ref|YP_306571.1| - 1.6e-15 57.0 7.5 2.3e-15 56.5 7.5 1.2 1 0 0 1 1 1 1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter TauE PF01925.19 gi|73670556|ref|YP_306571.1| - 0.0019 17.9 0.3 0.0025 17.5 0.3 1.3 1 1 0 1 1 1 1 Sulfite exporter TauE/SafE MCU PF04678.13 gi|73670556|ref|YP_306571.1| - 0.044 13.9 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial calcium uniporter Mit_proteolip PF08039.11 gi|73670556|ref|YP_306571.1| - 0.079 13.4 0.1 0.14 12.6 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial proteolipid LapA_dom PF06305.11 gi|73670556|ref|YP_306571.1| - 0.33 10.8 1.2 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain ATP-synt_DE_N PF02823.16 gi|73670557|ref|YP_306572.1| - 9.5e-16 57.5 0.0 1.5e-15 56.8 0.0 1.3 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATP-synt_ab PF00006.25 gi|73670558|ref|YP_306573.1| - 1.8e-63 214.0 0.0 2.9e-63 213.4 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|73670558|ref|YP_306573.1| - 4.6e-09 36.7 0.1 8.9e-09 35.8 0.1 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain T3SS_ATPase_C PF18269.1 gi|73670558|ref|YP_306573.1| - 0.0098 15.7 2.1 0.023 14.5 0.7 2.3 2 1 0 2 2 2 1 T3SS EscN ATPase C-terminal domain AAA_19 PF13245.6 gi|73670558|ref|YP_306573.1| - 0.072 13.4 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|73670558|ref|YP_306573.1| - 0.11 13.0 0.0 0.29 11.6 0.0 1.7 2 0 0 2 2 2 0 ABC transporter TrwB_AAD_bind PF10412.9 gi|73670558|ref|YP_306573.1| - 0.15 11.0 0.1 0.24 10.3 0.1 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NB-ARC PF00931.22 gi|73670558|ref|YP_306573.1| - 0.23 10.6 0.1 0.47 9.6 0.1 1.5 1 0 0 1 1 1 0 NB-ARC domain Y1_Tnp PF01797.16 gi|73670559|ref|YP_306574.1| - 7.2e-31 106.8 0.0 8.7e-31 106.5 0.0 1.1 1 0 0 1 1 1 1 Transposase IS200 like Lipid_DES PF08557.10 gi|73670559|ref|YP_306574.1| - 0.1 12.1 0.0 0.26 10.8 0.0 1.8 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) ATPase PF06745.13 gi|73670560|ref|YP_306575.1| - 1.9e-61 207.4 0.3 2.1e-61 207.3 0.3 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|73670560|ref|YP_306575.1| - 0.00023 20.8 0.0 0.00043 19.9 0.0 1.4 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|73670560|ref|YP_306575.1| - 0.00024 20.4 0.7 0.0007 18.9 0.1 2.0 1 1 0 2 2 2 1 Rad51 RecA PF00154.21 gi|73670560|ref|YP_306575.1| - 0.0004 20.0 0.0 0.00063 19.3 0.0 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein DnaB_C PF03796.15 gi|73670560|ref|YP_306575.1| - 0.00043 19.7 0.0 0.00061 19.2 0.0 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain GvpD PF07088.11 gi|73670560|ref|YP_306575.1| - 0.00074 18.3 0.5 0.055 12.1 0.2 3.0 1 1 1 2 2 2 1 GvpD gas vesicle protein AAA_14 PF13173.6 gi|73670560|ref|YP_306575.1| - 0.0018 18.3 0.2 0.043 13.9 0.2 2.1 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|73670560|ref|YP_306575.1| - 0.0025 17.7 0.0 0.0037 17.2 0.0 1.3 1 0 0 1 1 1 1 NTPase DUF2075 PF09848.9 gi|73670560|ref|YP_306575.1| - 0.0025 17.1 0.0 0.0032 16.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 gi|73670560|ref|YP_306575.1| - 0.0082 16.2 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|73670560|ref|YP_306575.1| - 0.017 15.4 0.3 0.053 13.8 0.3 1.8 1 1 0 1 1 1 0 AAA domain MORN_2 PF07661.13 gi|73670560|ref|YP_306575.1| - 0.14 12.4 0.1 0.41 11.0 0.1 1.8 1 0 0 1 1 1 0 MORN repeat variant cobW PF02492.19 gi|73670560|ref|YP_306575.1| - 0.14 11.7 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain PAXNEB PF05625.11 gi|73670560|ref|YP_306575.1| - 0.18 10.9 0.0 0.26 10.4 0.0 1.2 1 0 0 1 1 1 0 PAXNEB protein MetOD1 PF18546.1 gi|73670561|ref|YP_306576.1| - 2.1e-44 151.2 0.8 2.8e-44 150.8 0.8 1.2 1 0 0 1 1 1 1 Metanogen output domain 1 Response_reg PF00072.24 gi|73670561|ref|YP_306576.1| - 3.9e-27 94.6 0.4 6.2e-27 94.0 0.4 1.3 1 0 0 1 1 1 1 Response regulator receiver domain ATPase PF06745.13 gi|73670562|ref|YP_306577.1| - 1.3e-43 149.0 0.3 1.4e-43 148.9 0.3 1.0 1 0 0 1 1 1 1 KaiC RecA PF00154.21 gi|73670562|ref|YP_306577.1| - 7.1e-07 28.9 0.6 9.6e-06 25.2 0.0 2.1 2 0 0 2 2 2 1 recA bacterial DNA recombination protein DnaB_C PF03796.15 gi|73670562|ref|YP_306577.1| - 7.7e-07 28.7 0.0 1.6e-06 27.6 0.0 1.5 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain NTPase_1 PF03266.15 gi|73670562|ref|YP_306577.1| - 6.8e-06 26.1 0.4 1.9e-05 24.7 0.4 1.8 1 1 0 1 1 1 1 NTPase IstB_IS21 PF01695.17 gi|73670562|ref|YP_306577.1| - 1.4e-05 25.0 0.1 0.00035 20.4 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein GvpD PF07088.11 gi|73670562|ref|YP_306577.1| - 5.9e-05 21.9 0.2 0.00013 20.8 0.2 1.6 1 1 0 1 1 1 1 GvpD gas vesicle protein DUF2075 PF09848.9 gi|73670562|ref|YP_306577.1| - 0.00011 21.6 0.0 0.00014 21.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_25 PF13481.6 gi|73670562|ref|YP_306577.1| - 0.00013 21.6 0.2 0.00034 20.2 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|73670562|ref|YP_306577.1| - 0.00041 20.6 0.0 0.00081 19.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|73670562|ref|YP_306577.1| - 0.002 18.1 0.0 0.003 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) DEAD PF00270.29 gi|73670562|ref|YP_306577.1| - 0.0023 17.7 0.0 0.0036 17.1 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_16 PF13191.6 gi|73670562|ref|YP_306577.1| - 0.0024 18.3 0.0 0.0027 18.1 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain cobW PF02492.19 gi|73670562|ref|YP_306577.1| - 0.0032 17.1 0.1 0.055 13.0 0.0 2.1 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain ResIII PF04851.15 gi|73670562|ref|YP_306577.1| - 0.015 15.3 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 gi|73670562|ref|YP_306577.1| - 0.019 14.7 0.7 0.047 13.4 0.7 1.7 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|73670562|ref|YP_306577.1| - 0.039 14.2 0.0 0.053 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain DUF835 PF05763.12 gi|73670562|ref|YP_306577.1| - 0.048 13.4 1.5 0.16 11.7 1.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF835) AAA PF00004.29 gi|73670562|ref|YP_306577.1| - 0.049 14.0 0.9 0.21 12.0 0.9 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) T2SSE PF00437.20 gi|73670562|ref|YP_306577.1| - 0.062 12.3 0.0 0.091 11.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_18 PF13238.6 gi|73670562|ref|YP_306577.1| - 0.064 13.8 0.2 0.099 13.2 0.2 1.5 1 1 0 1 1 1 0 AAA domain PAXNEB PF05625.11 gi|73670562|ref|YP_306577.1| - 0.072 12.2 0.4 0.12 11.5 0.4 1.2 1 0 0 1 1 1 0 PAXNEB protein AAA_14 PF13173.6 gi|73670562|ref|YP_306577.1| - 0.083 12.9 0.0 0.2 11.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain Rad51 PF08423.11 gi|73670562|ref|YP_306577.1| - 0.12 11.6 0.1 0.2 10.9 0.1 1.3 1 0 0 1 1 1 0 Rad51 AAA_19 PF13245.6 gi|73670562|ref|YP_306577.1| - 0.15 12.4 0.3 0.18 12.1 0.3 1.6 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|73670562|ref|YP_306577.1| - 0.17 11.2 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AglB_L1 PF18079.1 gi|73670563|ref|YP_306578.1| - 0.0026 18.0 0.0 0.24 11.7 0.0 2.3 2 0 0 2 2 2 1 Archaeal glycosylation protein B long peripheral domain CarboxypepD_reg PF13620.6 gi|73670563|ref|YP_306578.1| - 0.0037 17.5 0.2 0.75 10.1 0.0 2.5 1 1 1 2 2 2 2 Carboxypeptidase regulatory-like domain Big_7 PF17957.1 gi|73670563|ref|YP_306578.1| - 0.01 16.6 0.9 3.5 8.5 0.3 3.1 2 1 0 2 2 2 0 Bacterial Ig domain Cupredoxin_1 PF13473.6 gi|73670563|ref|YP_306578.1| - 0.047 13.8 0.1 3.9 7.6 0.0 2.4 2 0 0 2 2 2 0 Cupredoxin-like domain SpaA PF17802.1 gi|73670563|ref|YP_306578.1| - 0.083 13.2 0.3 0.19 12.1 0.0 1.7 2 1 0 2 2 2 0 Prealbumin-like fold domain TrkA_N PF02254.18 gi|73670564|ref|YP_306579.1| - 9.5e-23 80.7 1.1 1.8e-22 79.8 0.1 1.8 2 1 0 2 2 2 1 TrkA-N domain TrkA_C PF02080.21 gi|73670564|ref|YP_306579.1| - 2.9e-13 49.4 0.4 1.3e-12 47.4 0.4 2.1 2 0 0 2 2 2 1 TrkA-C domain XdhC_C PF13478.6 gi|73670564|ref|YP_306579.1| - 0.0052 17.3 0.0 0.057 13.9 0.0 2.2 2 1 0 2 2 2 1 XdhC Rossmann domain Cue1_U7BR PF18499.1 gi|73670564|ref|YP_306579.1| - 0.065 13.3 0.0 0.18 11.9 0.0 1.7 1 0 0 1 1 1 0 Ubc7p-binding region of Cue1 TrkA_N PF02254.18 gi|73670565|ref|YP_306580.1| - 8.6e-25 87.3 0.7 1.4e-24 86.5 0.7 1.4 1 0 0 1 1 1 1 TrkA-N domain Ion_trans_2 PF07885.16 gi|73670565|ref|YP_306580.1| - 2.6e-13 49.7 12.0 4.8e-13 48.9 12.0 1.4 1 0 0 1 1 1 1 Ion channel TrkA_C PF02080.21 gi|73670565|ref|YP_306580.1| - 1.1e-10 41.2 0.3 1e-09 38.0 0.0 2.7 3 0 0 3 3 3 1 TrkA-C domain Ion_trans PF00520.31 gi|73670565|ref|YP_306580.1| - 0.001 18.4 7.7 0.0016 17.7 7.7 1.2 1 0 0 1 1 1 1 Ion transport protein Castor_Poll_mid PF06241.12 gi|73670565|ref|YP_306580.1| - 0.0028 17.6 0.1 0.01 15.8 0.0 2.0 2 1 1 3 3 3 1 Castor and Pollux, part of voltage-gated ion channel ADH_zinc_N PF00107.26 gi|73670565|ref|YP_306580.1| - 0.013 15.4 0.0 0.039 13.9 0.0 1.7 1 0 0 1 1 1 0 Zinc-binding dehydrogenase LUD_dom PF02589.15 gi|73670565|ref|YP_306580.1| - 0.038 13.7 0.0 0.1 12.3 0.0 1.7 1 1 0 1 1 1 0 LUD domain PDZ_2 PF13180.6 gi|73670566|ref|YP_306581.1| - 5.8e-22 77.8 0.2 7.9e-14 51.7 0.1 2.4 1 1 1 2 2 2 2 PDZ domain Peptidase_M50 PF02163.22 gi|73670566|ref|YP_306581.1| - 1.4e-20 73.6 0.0 1.7e-19 70.1 0.0 2.2 1 1 0 1 1 1 1 Peptidase family M50 PDZ_6 PF17820.1 gi|73670566|ref|YP_306581.1| - 7.2e-12 45.0 0.0 2.6e-06 27.2 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 gi|73670566|ref|YP_306581.1| - 4.8e-09 36.4 0.7 0.0022 18.3 0.1 2.5 2 0 0 2 2 2 2 PDZ domain Tricorn_PDZ PF14685.6 gi|73670566|ref|YP_306581.1| - 5.6e-05 23.0 0.2 0.12 12.4 0.0 2.3 2 0 0 2 2 2 2 Tricorn protease PDZ domain PDZ_1 PF12812.7 gi|73670566|ref|YP_306581.1| - 0.0061 16.6 0.1 2.9 8.0 0.0 2.7 3 0 0 3 3 3 2 PDZ-like domain CutA1 PF03091.15 gi|73670567|ref|YP_306582.1| - 5.2e-34 116.0 0.2 5.9e-34 115.9 0.2 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein CRISPR_Cas2 PF09827.9 gi|73670570|ref|YP_306585.1| - 9.4e-15 54.6 0.0 1.4e-14 54.1 0.0 1.2 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Cas_Cas1 PF01867.16 gi|73670571|ref|YP_306586.1| - 7.1e-94 314.1 0.0 9.4e-94 313.7 0.0 1.2 1 0 0 1 1 1 1 CRISPR associated protein Cas1 Cas_Cas4 PF01930.17 gi|73670571|ref|YP_306586.1| - 1.8e-27 96.5 0.4 3.3e-27 95.6 0.4 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|73670571|ref|YP_306586.1| - 3.4e-06 27.2 0.1 6.3e-06 26.3 0.1 1.5 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily EndIII_4Fe-2S PF10576.9 gi|73670571|ref|YP_306586.1| - 0.088 13.2 0.5 0.16 12.4 0.5 1.4 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III Cas_GSU0054 PF09609.10 gi|73670572|ref|YP_306587.1| - 8.4e-05 21.5 0.9 0.024 13.4 0.0 2.8 4 0 0 4 4 4 2 CRISPR-associated protein, GSU0054 family (Cas_GSU0054) Cas_GSU0053 PF09617.10 gi|73670573|ref|YP_306588.1| - 2.4e-41 141.5 0.0 4.2e-41 140.7 0.0 1.4 1 0 0 1 1 1 1 CRISPR-associated protein GSU0053 (Cas_GSU0053) ZZ PF00569.17 gi|73670574|ref|YP_306589.1| - 0.2 11.5 1.5 43 4.0 0.0 3.2 3 0 0 3 3 3 0 Zinc finger, ZZ type Helicase_C PF00271.31 gi|73670575|ref|YP_306590.1| - 1.4e-12 48.0 0.1 3.1e-12 46.8 0.1 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HD_6 PF18019.1 gi|73670575|ref|YP_306590.1| - 1.3e-10 41.7 0.6 7.9e-10 39.2 0.6 2.0 1 1 0 1 1 1 1 HD domain DEAD PF00270.29 gi|73670575|ref|YP_306590.1| - 2.3e-08 34.0 0.0 7.3e-07 29.1 0.0 2.9 1 1 1 2 2 2 1 DEAD/DEAH box helicase HD PF01966.22 gi|73670575|ref|YP_306590.1| - 8.1e-05 22.8 0.7 0.00025 21.2 0.7 1.9 1 0 0 1 1 1 1 HD domain ResIII PF04851.15 gi|73670575|ref|YP_306590.1| - 0.06 13.4 0.0 7.5 6.5 0.0 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AIRC PF00731.20 gi|73670576|ref|YP_306591.1| - 1.8e-43 147.7 1.3 2.1e-43 147.4 1.3 1.0 1 0 0 1 1 1 1 AIR carboxylase DXP_reductoisom PF02670.16 gi|73670576|ref|YP_306591.1| - 0.028 15.2 0.0 0.037 14.7 0.0 1.4 1 1 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CM_2 PF01817.21 gi|73670577|ref|YP_306592.1| - 9.8e-14 51.5 4.8 1.1e-13 51.3 4.8 1.0 1 0 0 1 1 1 1 Chorismate mutase type II FTCD_C PF04961.12 gi|73670577|ref|YP_306592.1| - 0.012 15.4 0.2 0.013 15.3 0.2 1.0 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase Osmo_CC PF08946.10 gi|73670577|ref|YP_306592.1| - 0.11 12.8 2.5 0.22 11.8 2.5 1.5 1 0 0 1 1 1 0 Osmosensory transporter coiled coil GHMP_kinases_N PF00288.26 gi|73670578|ref|YP_306593.1| - 9.7e-13 48.2 2.2 1.5e-12 47.6 1.0 2.0 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|73670578|ref|YP_306593.1| - 0.00014 22.1 3.2 0.00094 19.5 0.1 2.7 3 0 0 3 3 3 1 GHMP kinases C terminal FlpD PF02662.16 gi|73670578|ref|YP_306593.1| - 0.069 13.2 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit PhoU PF01895.19 gi|73670579|ref|YP_306594.1| - 2.5e-25 88.7 5.4 3.3e-17 62.7 0.4 2.5 2 0 0 2 2 2 2 PhoU domain HAMP PF00672.25 gi|73670579|ref|YP_306594.1| - 0.079 13.4 1.1 1.8 9.0 0.0 2.9 3 0 0 3 3 3 0 HAMP domain HSBP1 PF06825.12 gi|73670579|ref|YP_306594.1| - 0.094 12.6 0.2 1.9 8.4 0.0 2.6 2 0 0 2 2 2 0 Heat shock factor binding protein 1 SKA2 PF16740.5 gi|73670579|ref|YP_306594.1| - 0.26 11.1 3.5 2 8.2 0.9 2.9 3 0 0 3 3 3 0 Spindle and kinetochore-associated protein 2 Fib_alpha PF08702.10 gi|73670579|ref|YP_306594.1| - 1.9 8.7 5.1 1.3 9.2 2.7 1.9 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family MMR_HSR1 PF01926.23 gi|73670580|ref|YP_306595.1| - 2.6e-16 59.7 0.1 3.5e-16 59.3 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 gi|73670580|ref|YP_306595.1| - 6.3e-14 52.0 1.2 1.4e-05 24.8 0.1 3.0 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|73670580|ref|YP_306595.1| - 3e-06 27.2 0.0 0.0028 17.6 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase Arf PF00025.21 gi|73670580|ref|YP_306595.1| - 4.3e-06 26.3 0.0 0.018 14.5 0.0 2.4 2 0 0 2 2 2 2 ADP-ribosylation factor family Septin PF00735.18 gi|73670580|ref|YP_306595.1| - 8e-06 25.3 0.0 1.1e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Septin Roc PF08477.13 gi|73670580|ref|YP_306595.1| - 9.8e-05 22.6 0.1 0.034 14.4 0.0 2.2 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 gi|73670580|ref|YP_306595.1| - 0.0004 19.9 0.0 0.033 13.6 0.0 2.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_24 PF13479.6 gi|73670580|ref|YP_306595.1| - 0.0019 17.9 0.2 0.0031 17.3 0.2 1.4 1 1 0 1 1 1 1 AAA domain FeoB_N PF02421.18 gi|73670580|ref|YP_306595.1| - 0.003 17.1 0.1 0.013 15.0 0.1 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B NB-ARC PF00931.22 gi|73670580|ref|YP_306595.1| - 0.0033 16.6 0.0 0.0039 16.4 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain AAA_18 PF13238.6 gi|73670580|ref|YP_306595.1| - 0.0039 17.7 0.0 0.0098 16.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|73670580|ref|YP_306595.1| - 0.012 16.1 0.0 0.016 15.7 0.0 1.3 1 0 0 1 1 1 0 ABC transporter MMR_HSR1_Xtn PF16897.5 gi|73670580|ref|YP_306595.1| - 0.015 15.3 0.0 0.026 14.5 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain AAA_16 PF13191.6 gi|73670580|ref|YP_306595.1| - 0.029 14.8 0.0 0.043 14.2 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|73670580|ref|YP_306595.1| - 0.029 14.8 0.1 0.071 13.5 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MobB PF03205.14 gi|73670580|ref|YP_306595.1| - 0.031 14.2 0.0 0.067 13.1 0.0 1.5 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_22 PF13401.6 gi|73670580|ref|YP_306595.1| - 0.039 14.2 0.0 0.082 13.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_35 PF14516.6 gi|73670580|ref|YP_306595.1| - 0.04 12.8 0.0 0.055 12.3 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain cobW PF02492.19 gi|73670580|ref|YP_306595.1| - 0.043 13.4 0.2 1.9 8.0 0.2 2.4 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 gi|73670580|ref|YP_306595.1| - 0.045 13.7 0.0 0.058 13.3 0.0 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 gi|73670580|ref|YP_306595.1| - 0.089 13.2 0.0 0.17 12.3 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.17 gi|73670580|ref|YP_306595.1| - 0.11 11.6 0.0 0.15 11.1 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF2073 PF09846.9 gi|73670581|ref|YP_306596.1| - 4.1e-46 155.2 0.4 4.8e-46 154.9 0.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2073) GatB_Yqey PF02637.18 gi|73670581|ref|YP_306596.1| - 0.0038 17.1 0.4 0.0046 16.9 0.4 1.3 1 0 0 1 1 1 1 GatB domain MucBP_2 PF17965.1 gi|73670582|ref|YP_306597.1| - 0.086 13.4 0.2 0.19 12.3 0.1 1.7 2 0 0 2 2 2 0 Mucin binding domain SIS PF01380.22 gi|73670583|ref|YP_306598.1| - 8.9e-18 64.4 0.1 1.5e-17 63.7 0.1 1.3 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 gi|73670583|ref|YP_306598.1| - 6.2e-07 29.5 1.8 0.0059 16.6 0.1 2.2 1 1 1 2 2 2 2 SIS domain GAPES2 PF17156.4 gi|73670583|ref|YP_306598.1| - 0.06 13.1 0.0 0.074 12.8 0.0 1.2 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain THF_DHG_CYH_C PF02882.19 gi|73670583|ref|YP_306598.1| - 0.094 12.0 0.2 0.13 11.6 0.2 1.2 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aminotran_1_2 PF00155.21 gi|73670584|ref|YP_306599.1| - 8.5e-70 235.7 0.0 1e-69 235.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|73670584|ref|YP_306599.1| - 7.2e-11 42.0 0.2 1.1e-10 41.4 0.2 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|73670584|ref|YP_306599.1| - 1.4e-10 40.7 0.0 2e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|73670584|ref|YP_306599.1| - 3.2e-09 35.8 0.0 4.8e-09 35.2 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|73670584|ref|YP_306599.1| - 8.6e-05 22.0 0.0 0.0001 21.7 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DsbD PF02683.15 gi|73670586|ref|YP_306601.1| - 1.7e-18 67.3 13.4 2.3e-18 66.9 13.4 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Gp-FAR-1 PF05823.12 gi|73670587|ref|YP_306602.1| - 0.037 14.4 0.9 0.043 14.2 0.9 1.1 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DUF4157 PF13699.6 gi|73670588|ref|YP_306603.1| - 0.0031 17.7 0.7 0.0066 16.7 0.2 1.9 2 1 0 2 2 2 1 Domain of unknown function (DUF4157) Glycos_transf_1 PF00534.20 gi|73670589|ref|YP_306604.1| - 1.4e-15 57.2 0.0 3.9e-15 55.8 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73670589|ref|YP_306604.1| - 3.3e-13 50.2 0.0 3.4e-12 46.9 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73670589|ref|YP_306604.1| - 2e-10 40.9 0.0 3.6e-10 40.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_hydro_88 PF07470.13 gi|73670589|ref|YP_306604.1| - 0.00048 19.3 0.8 0.003 16.7 0.5 2.2 2 0 0 2 2 2 1 Glycosyl Hydrolase Family 88 C5-epim_C PF06662.13 gi|73670589|ref|YP_306604.1| - 0.0036 16.8 1.1 0.2 11.2 0.1 2.5 2 0 0 2 2 2 1 D-glucuronyl C5-epimerase C-terminus Glyco_trans_1_2 PF13524.6 gi|73670589|ref|YP_306604.1| - 0.024 15.0 0.0 0.056 13.8 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 Glyco_hydro_127 PF07944.12 gi|73670589|ref|YP_306604.1| - 0.027 13.0 1.2 0.14 10.6 0.4 2.1 2 1 0 2 2 2 0 Beta-L-arabinofuranosidase, GH127 Glyco_hydro_76 PF03663.14 gi|73670589|ref|YP_306604.1| - 0.029 13.9 1.2 0.053 13.0 1.2 1.4 1 0 0 1 1 1 0 Glycosyl hydrolase family 76 Glyco_hydro_130 PF04041.13 gi|73670590|ref|YP_306605.1| - 4.1e-55 187.0 0.0 5e-55 186.7 0.0 1.0 1 0 0 1 1 1 1 beta-1,4-mannooligosaccharide phosphorylase MannoseP_isomer PF01050.18 gi|73670591|ref|YP_306606.1| - 6e-34 117.1 0.2 1.2e-33 116.1 0.2 1.5 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Glycos_transf_1 PF00534.20 gi|73670591|ref|YP_306606.1| - 4.1e-27 94.8 0.2 7e-27 94.0 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73670591|ref|YP_306606.1| - 6.2e-18 65.5 0.0 1.2e-17 64.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Cupin_2 PF07883.11 gi|73670591|ref|YP_306606.1| - 6.1e-11 41.9 0.0 1e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Cupin domain Glyco_transf_4 PF13439.6 gi|73670591|ref|YP_306606.1| - 7.8e-11 42.3 0.0 4.6e-10 39.8 0.1 2.0 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|73670591|ref|YP_306606.1| - 1.8e-06 28.2 0.0 4.4e-06 27.0 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Cupin_3 PF05899.12 gi|73670591|ref|YP_306606.1| - 0.0022 17.7 0.0 0.0047 16.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 gi|73670591|ref|YP_306606.1| - 0.0055 16.6 0.0 0.01 15.8 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Glyco_trans_4_4 PF13579.6 gi|73670591|ref|YP_306606.1| - 0.018 15.5 0.0 0.048 14.1 0.0 1.6 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain Lactamase_B_2 PF12706.7 gi|73670593|ref|YP_306608.1| - 2.7e-24 85.8 0.0 3.4e-24 85.5 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|73670593|ref|YP_306608.1| - 9.4e-11 42.1 0.8 3.4e-10 40.3 0.6 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|73670593|ref|YP_306608.1| - 0.045 13.2 0.0 0.13 11.7 0.0 1.8 3 0 0 3 3 3 0 Metallo-beta-lactamase superfamily domain Lactonase PF10282.9 gi|73670594|ref|YP_306609.1| - 6.3e-21 75.0 2.2 3.7e-09 36.3 0.2 3.8 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller PKD PF00801.20 gi|73670594|ref|YP_306609.1| - 4.9e-17 61.5 10.5 3.7e-08 33.1 1.0 3.1 2 0 0 2 2 2 2 PKD domain NHL PF01436.21 gi|73670594|ref|YP_306609.1| - 2.5e-13 49.3 12.7 0.0066 16.4 0.0 7.3 7 0 0 7 7 6 4 NHL repeat Cytochrom_D1 PF02239.16 gi|73670594|ref|YP_306609.1| - 1.1e-11 43.8 6.1 0.00067 18.3 0.6 3.7 1 1 1 3 3 3 2 Cytochrome D1 heme domain SGL PF08450.12 gi|73670594|ref|YP_306609.1| - 2.8e-10 40.2 6.4 1.3e-07 31.4 1.7 3.8 1 1 1 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 gi|73670594|ref|YP_306609.1| - 4.3e-06 26.8 11.9 0.33 11.2 0.1 6.6 3 2 3 6 6 6 2 Arylesterase SBP56 PF05694.11 gi|73670594|ref|YP_306609.1| - 2.7e-05 23.2 0.2 1.1 8.0 0.0 5.2 1 1 5 6 6 6 1 56kDa selenium binding protein (SBP56) PD40 PF07676.12 gi|73670594|ref|YP_306609.1| - 3.4e-05 23.7 2.4 3.5 7.7 0.0 5.9 5 0 0 5 5 5 1 WD40-like Beta Propeller Repeat Str_synth PF03088.16 gi|73670594|ref|YP_306609.1| - 0.0012 18.9 0.3 36 4.6 0.0 5.8 5 2 2 7 7 7 0 Strictosidine synthase Glu_cyclase_2 PF05096.12 gi|73670594|ref|YP_306609.1| - 0.0017 17.8 0.1 0.095 12.1 0.0 3.0 1 1 1 3 3 3 1 Glutamine cyclotransferase Thioredox_DsbH PF03190.15 gi|73670594|ref|YP_306609.1| - 0.046 13.7 0.0 0.29 11.1 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function, DUF255 SspH PF08141.12 gi|73670594|ref|YP_306609.1| - 6.7 6.9 10.2 3.1 8.0 0.1 4.9 3 2 1 4 4 4 0 Small acid-soluble spore protein H family PBCV_basic_adap PF08789.10 gi|73670594|ref|YP_306609.1| - 9.7 6.4 11.9 1.8e+02 2.4 0.0 5.6 6 0 0 6 6 6 0 PBCV-specific basic adaptor domain PKD PF00801.20 gi|73670595|ref|YP_306610.1| - 2.3e-48 161.9 38.8 5.8e-15 54.9 3.1 5.4 5 0 0 5 5 5 4 PKD domain Lactonase PF10282.9 gi|73670595|ref|YP_306610.1| - 3.7e-11 42.9 7.2 1.4e-05 24.6 0.8 4.3 1 1 2 3 3 3 2 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|73670595|ref|YP_306610.1| - 1e-09 38.3 11.2 3.6e-09 36.6 6.5 4.0 3 1 1 4 4 4 1 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|73670595|ref|YP_306610.1| - 4.5e-08 32.7 16.4 0.56 10.4 0.3 7.2 7 0 0 7 7 7 4 NHL repeat Cytochrom_D1 PF02239.16 gi|73670595|ref|YP_306610.1| - 2.1e-07 29.8 7.1 0.091 11.3 1.1 3.7 1 1 1 3 3 3 3 Cytochrome D1 heme domain DPPIV_N PF00930.21 gi|73670595|ref|YP_306610.1| - 4.2e-06 25.8 12.9 0.00019 20.3 2.3 4.7 4 2 1 5 5 5 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region PD40 PF07676.12 gi|73670595|ref|YP_306610.1| - 8.1e-06 25.6 10.3 2.1 8.4 0.1 7.1 7 0 0 7 7 7 2 WD40-like Beta Propeller Repeat PKD_3 PF16820.5 gi|73670595|ref|YP_306610.1| - 7.6e-05 22.4 10.6 0.76 9.6 0.1 4.9 4 0 0 4 4 4 3 PKD-like domain Arylesterase PF01731.20 gi|73670595|ref|YP_306610.1| - 0.0026 17.9 9.1 6.4 7.1 0.1 5.2 2 2 1 4 4 4 2 Arylesterase YueH PF14166.6 gi|73670595|ref|YP_306610.1| - 0.014 15.2 0.1 0.33 10.8 0.0 2.8 2 0 0 2 2 2 0 YueH-like protein DUF1513 PF07433.11 gi|73670595|ref|YP_306610.1| - 0.5 9.4 4.5 4.8 6.2 0.1 3.3 3 1 1 4 4 4 0 Protein of unknown function (DUF1513) Ig_3 PF13927.6 gi|73670595|ref|YP_306610.1| - 0.66 10.6 12.0 1 10.0 0.2 4.7 4 0 0 4 4 4 0 Immunoglobulin domain S-layer PF07752.11 gi|73670596|ref|YP_306611.1| - 1.8e-172 571.2 33.3 8.9e-68 228.1 1.9 3.2 2 1 1 3 3 3 3 S-layer protein PKD PF00801.20 gi|73670596|ref|YP_306611.1| - 0.00013 21.7 0.4 0.00047 19.9 0.4 2.0 1 0 0 1 1 1 1 PKD domain PGF-CTERM PF18204.1 gi|73670596|ref|YP_306611.1| - 0.17 11.9 0.1 0.32 11.0 0.1 1.4 1 0 0 1 1 1 0 PGF-CTERM motif PmrD PF11183.8 gi|73670596|ref|YP_306611.1| - 0.17 12.0 0.3 7.7 6.7 0.1 3.1 3 0 0 3 3 3 0 Polymyxin resistance protein PmrD MarR PF01047.22 gi|73670597|ref|YP_306612.1| - 4.4e-13 48.9 0.1 1e-12 47.8 0.1 1.7 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|73670597|ref|YP_306612.1| - 3.5e-08 33.2 0.0 6.6e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|73670597|ref|YP_306612.1| - 1.4e-07 31.9 0.0 3.1e-07 30.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|73670597|ref|YP_306612.1| - 1.3e-05 25.0 1.0 3.3e-05 23.8 1.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.6 gi|73670597|ref|YP_306612.1| - 0.0027 17.9 0.2 0.0071 16.5 0.1 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain HxlR PF01638.17 gi|73670597|ref|YP_306612.1| - 0.013 15.3 0.5 0.028 14.3 0.2 1.7 1 1 1 2 2 2 0 HxlR-like helix-turn-helix DUF4268 PF14088.6 gi|73670597|ref|YP_306612.1| - 0.015 15.1 2.5 0.025 14.5 2.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4268) HTH_Crp_2 PF13545.6 gi|73670597|ref|YP_306612.1| - 0.019 14.9 0.0 0.043 13.8 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|73670597|ref|YP_306612.1| - 0.026 14.4 0.3 0.064 13.1 0.1 2.0 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Methyltransf_4 PF02390.17 gi|73670597|ref|YP_306612.1| - 0.049 13.1 0.3 0.075 12.5 0.3 1.3 1 0 0 1 1 1 0 Putative methyltransferase NYD-SP28_assoc PF14775.6 gi|73670597|ref|YP_306612.1| - 0.051 13.7 2.2 0.092 12.9 0.7 2.2 2 1 0 2 2 2 0 Sperm tail C-terminal domain YtxH PF12732.7 gi|73670597|ref|YP_306612.1| - 0.069 13.7 1.3 0.22 12.1 0.6 2.0 2 1 1 3 3 3 0 YtxH-like protein Usp PF00582.26 gi|73670598|ref|YP_306613.1| - 9.1e-34 117.0 0.0 1e-33 116.8 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family NPCBM_assoc PF10633.9 gi|73670599|ref|YP_306614.1| - 7e-05 23.0 0.1 0.16 12.2 0.0 3.4 3 0 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|73670599|ref|YP_306614.1| - 0.025 14.8 2.1 0.45 10.8 0.1 2.7 2 1 0 2 2 2 0 CARDB DUF1934 PF09148.10 gi|73670599|ref|YP_306614.1| - 0.059 13.4 0.9 0.71 9.9 0.1 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF1934) NPCBM_assoc PF10633.9 gi|73670600|ref|YP_306615.1| - 1.2e-05 25.5 0.3 0.11 12.8 0.0 3.3 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4832 PF16116.5 gi|73670600|ref|YP_306615.1| - 0.0094 15.8 1.2 0.072 12.9 1.2 2.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4832) DUF4625 PF15418.6 gi|73670600|ref|YP_306615.1| - 0.021 15.0 0.2 0.14 12.4 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4625) TolA PF06519.11 gi|73670600|ref|YP_306615.1| - 0.052 13.7 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 TolA C-terminal DUF3520 PF12034.8 gi|73670600|ref|YP_306615.1| - 0.13 12.4 2.9 1.6 8.8 0.1 3.2 2 1 2 4 4 4 0 Domain of unknown function (DUF3520) LRRC37AB_C PF14914.6 gi|73670600|ref|YP_306615.1| - 0.19 11.6 1.7 0.2 11.6 0.0 1.9 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain MMPL PF03176.15 gi|73670601|ref|YP_306616.1| - 2.4e-50 171.4 11.6 2.9e-29 102.1 0.2 2.1 2 0 0 2 2 2 2 MMPL family Sterol-sensing PF12349.8 gi|73670601|ref|YP_306616.1| - 2.7e-10 40.3 14.7 2.5e-07 30.6 2.3 2.8 3 0 0 3 3 3 2 Sterol-sensing domain of SREBP cleavage-activation Patched PF02460.18 gi|73670601|ref|YP_306616.1| - 5.4e-10 38.0 16.5 3.5e-06 25.4 1.3 3.1 2 1 0 3 3 3 2 Patched family ACR_tran PF00873.19 gi|73670601|ref|YP_306616.1| - 1.1e-09 36.6 10.9 3.3e-08 31.7 2.7 2.2 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 gi|73670601|ref|YP_306616.1| - 5.8e-09 35.6 5.2 5.8e-09 35.6 5.2 2.5 2 1 0 2 2 2 1 Protein export membrane protein DUF2573 PF10835.8 gi|73670601|ref|YP_306616.1| - 0.081 13.3 0.3 0.8 10.1 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2573) Fzo_mitofusin PF04799.13 gi|73670601|ref|YP_306616.1| - 0.16 11.5 0.8 0.34 10.5 0.8 1.5 1 0 0 1 1 1 0 fzo-like conserved region HEAT_2 PF13646.6 gi|73670603|ref|YP_306618.1| - 3.2e-44 149.2 19.2 1.6e-15 57.2 0.6 4.1 1 1 4 5 5 5 4 HEAT repeats HEAT_PBS PF03130.16 gi|73670603|ref|YP_306618.1| - 4e-24 82.8 10.1 6.2e-07 29.5 0.3 7.1 7 0 0 7 7 7 5 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|73670603|ref|YP_306618.1| - 2e-17 61.8 0.6 0.00019 21.4 0.0 5.8 6 0 0 6 6 6 3 HEAT repeat Arm PF00514.23 gi|73670603|ref|YP_306618.1| - 1.4e-11 44.1 0.8 0.027 14.5 0.0 5.9 3 2 4 7 7 7 2 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 gi|73670603|ref|YP_306618.1| - 1.7e-11 44.4 2.1 0.0048 17.4 0.1 5.1 5 0 0 5 5 5 2 HEAT-like repeat Cnd1 PF12717.7 gi|73670603|ref|YP_306618.1| - 2.7e-11 43.8 0.0 0.00018 21.6 0.0 2.8 2 1 0 2 2 2 2 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 gi|73670603|ref|YP_306618.1| - 2.4e-05 24.9 0.0 0.18 12.4 0.0 3.9 2 2 2 4 4 4 1 Vacuolar 14 Fab1-binding region Aconitase_B_N PF11791.8 gi|73670603|ref|YP_306618.1| - 0.00024 21.2 3.3 5.6 7.0 0.1 5.2 1 1 3 5 5 5 2 Aconitate B N-terminal domain IFRD PF05004.13 gi|73670603|ref|YP_306618.1| - 0.00045 19.4 2.7 0.083 12.0 1.0 2.3 1 1 1 2 2 2 2 Interferon-related developmental regulator (IFRD) BRCC36_C PF18110.1 gi|73670603|ref|YP_306618.1| - 0.013 15.6 0.1 12 6.2 0.0 3.8 3 1 0 4 4 4 0 BRCC36 C-terminal helical domain NIL PF09383.10 gi|73670603|ref|YP_306618.1| - 0.021 14.6 0.2 1.9 8.4 0.1 3.2 3 0 0 3 3 3 0 NIL domain DNA_PPF PF02916.15 gi|73670603|ref|YP_306618.1| - 0.066 13.6 0.0 0.22 11.9 0.0 1.8 1 0 0 1 1 1 0 DNA polymerase processivity factor Mgm101p PF06420.12 gi|73670603|ref|YP_306618.1| - 0.16 11.5 0.2 9.7 5.7 0.1 2.5 1 1 1 2 2 2 0 Mitochondrial genome maintenance MGM101 DUF2475 PF10629.9 gi|73670603|ref|YP_306618.1| - 0.21 11.8 0.0 0.4 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2475) PQQ_2 PF13360.6 gi|73670604|ref|YP_306619.1| - 1.6e-29 103.1 0.1 2e-13 50.5 0.2 3.2 2 1 1 3 3 3 3 PQQ-like domain PQQ PF01011.21 gi|73670604|ref|YP_306619.1| - 3.4e-21 74.1 16.1 0.001 18.9 0.1 7.7 9 0 0 9 9 9 6 PQQ enzyme repeat PQQ_3 PF13570.6 gi|73670604|ref|YP_306619.1| - 5.1e-17 61.8 4.5 0.00042 20.7 0.0 7.7 8 0 0 8 8 8 4 PQQ-like domain DUF4905 PF16248.5 gi|73670604|ref|YP_306619.1| - 0.015 15.2 2.0 9.9 6.1 0.0 4.3 3 1 0 4 4 4 0 Domain of unknown function (DUF4905) PQQ_2 PF13360.6 gi|73670605|ref|YP_306620.1| - 6.2e-30 104.5 0.1 3.8e-11 43.0 0.1 4.0 2 2 2 4 4 4 4 PQQ-like domain PQQ PF01011.21 gi|73670605|ref|YP_306620.1| - 4.9e-24 83.1 20.0 0.0028 17.5 0.1 8.2 9 0 0 9 9 9 6 PQQ enzyme repeat PQQ_3 PF13570.6 gi|73670605|ref|YP_306620.1| - 1.1e-15 57.6 5.1 0.0062 17.0 0.0 7.3 8 0 0 8 8 8 5 PQQ-like domain PepSY PF03413.19 gi|73670605|ref|YP_306620.1| - 0.0055 17.2 0.4 44 4.7 0.0 4.6 4 0 0 4 4 4 0 Peptidase propeptide and YPEB domain DUF1270 PF06900.11 gi|73670605|ref|YP_306620.1| - 0.034 14.5 2.4 0.15 12.5 2.4 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1270) DUF4905 PF16248.5 gi|73670605|ref|YP_306620.1| - 0.035 14.0 0.2 6.1 6.8 0.0 3.9 4 1 0 4 4 4 0 Domain of unknown function (DUF4905) EmrE PF13536.6 gi|73670605|ref|YP_306620.1| - 0.13 11.8 2.5 0.21 11.1 2.5 1.2 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter Gp5_C PF06715.12 gi|73670606|ref|YP_306621.1| - 0.00062 19.7 1.4 0.00082 19.3 0.0 1.9 3 0 0 3 3 3 1 Gp5 C-terminal repeat (3 copies) Defensin_propep PF00879.18 gi|73670606|ref|YP_306621.1| - 0.083 13.2 0.4 0.083 13.2 0.4 1.9 2 0 0 2 2 2 0 Defensin propeptide Cor1 PF04803.12 gi|73670606|ref|YP_306621.1| - 0.093 12.9 0.8 0.22 11.7 0.8 1.7 1 1 1 2 2 2 0 Cor1/Xlr/Xmr conserved region S4 PF01479.25 gi|73670608|ref|YP_306623.1| - 8e-13 47.9 0.3 2.5e-12 46.3 0.1 2.0 2 0 0 2 2 2 1 S4 domain FtsJ PF01728.19 gi|73670608|ref|YP_306623.1| - 1.1e-08 35.4 0.0 2.6e-08 34.2 0.0 1.7 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 gi|73670608|ref|YP_306623.1| - 3e-08 33.6 0.0 5.2e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670608|ref|YP_306623.1| - 7.4e-08 33.0 0.0 1.2e-07 32.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.17 gi|73670608|ref|YP_306623.1| - 1.3e-06 27.7 0.0 1.7e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_11 PF08241.12 gi|73670608|ref|YP_306623.1| - 1.8e-06 28.5 0.0 3.2e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain S4_2 PF13275.6 gi|73670608|ref|YP_306623.1| - 0.00019 21.2 0.1 0.00041 20.1 0.1 1.5 1 0 0 1 1 1 1 S4 domain Methyltransf_23 PF13489.6 gi|73670608|ref|YP_306623.1| - 0.0007 19.5 0.0 0.00095 19.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|73670608|ref|YP_306623.1| - 0.0019 19.2 0.0 0.005 17.8 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|73670608|ref|YP_306623.1| - 0.014 15.2 0.0 0.02 14.7 0.0 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase GTP_EFTU_D2 PF03144.25 gi|73670608|ref|YP_306623.1| - 0.042 14.2 0.0 0.2 12.1 0.0 2.1 1 0 0 1 1 1 0 Elongation factor Tu domain 2 Methyltransf_12 PF08242.12 gi|73670608|ref|YP_306623.1| - 0.062 14.0 0.0 0.12 13.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DUF2119 PF09892.9 gi|73670609|ref|YP_306624.1| - 2.6e-66 222.6 0.0 2.9e-66 222.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) HTH_23 PF13384.6 gi|73670610|ref|YP_306625.1| - 1.5e-06 27.8 0.0 2.5e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.12 gi|73670610|ref|YP_306625.1| - 1.9e-06 27.6 0.0 2.9e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_28 PF13518.6 gi|73670610|ref|YP_306625.1| - 0.00013 22.0 0.0 0.00019 21.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|73670610|ref|YP_306625.1| - 0.0015 18.3 0.0 0.0032 17.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|73670610|ref|YP_306625.1| - 0.0056 16.3 0.0 0.0094 15.6 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_29 PF13551.6 gi|73670610|ref|YP_306625.1| - 0.011 15.8 0.0 0.019 15.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix TnsD PF15978.5 gi|73670610|ref|YP_306625.1| - 0.013 14.5 0.1 0.02 13.9 0.1 1.4 1 1 0 1 1 1 0 Tn7-like transposition protein D Zn-ribbon_8 PF09723.10 gi|73670610|ref|YP_306625.1| - 0.013 15.6 2.4 0.49 10.6 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|73670610|ref|YP_306625.1| - 0.016 15.2 3.5 0.025 14.5 3.5 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Zn_Tnp_IS1 PF03811.13 gi|73670610|ref|YP_306625.1| - 0.019 14.7 5.2 0.037 13.7 5.2 1.5 1 0 0 1 1 1 0 InsA N-terminal domain zinc-ribbons_6 PF07191.12 gi|73670610|ref|YP_306625.1| - 0.039 13.9 1.0 0.058 13.4 0.5 1.5 2 0 0 2 2 2 0 zinc-ribbons HTH_Tnp_1 PF01527.20 gi|73670610|ref|YP_306625.1| - 0.05 13.9 0.0 0.071 13.4 0.0 1.2 1 0 0 1 1 1 0 Transposase DUF1670 PF07900.11 gi|73670610|ref|YP_306625.1| - 0.086 12.2 0.1 0.097 12.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) HTH_50 PF18024.1 gi|73670610|ref|YP_306625.1| - 0.15 11.7 0.0 0.28 10.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Mss51 PF13824.6 gi|73670610|ref|YP_306625.1| - 0.22 11.6 2.9 0.85 9.8 2.9 1.9 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 C1_1 PF00130.22 gi|73670610|ref|YP_306625.1| - 0.23 11.4 2.3 0.71 9.8 2.3 1.8 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Rubredoxin PF00301.20 gi|73670610|ref|YP_306625.1| - 0.29 11.2 2.6 0.94 9.6 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin zf-ACC PF17848.1 gi|73670610|ref|YP_306625.1| - 0.77 9.9 3.8 0.75 9.9 0.5 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain OrfB_Zn_ribbon PF07282.11 gi|73670610|ref|YP_306625.1| - 1.1 9.3 4.2 3.2 7.8 2.1 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-ISL3 PF14690.6 gi|73670610|ref|YP_306625.1| - 2.9 8.6 9.7 3.8 8.2 0.9 2.5 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PriA_CRR PF18319.1 gi|73670610|ref|YP_306625.1| - 3 7.9 7.5 3.6 7.7 2.0 2.3 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain DDE_Tnp_IS1 PF03400.13 gi|73670611|ref|YP_306626.1| - 6.9e-10 39.4 0.1 7.6e-10 39.2 0.1 1.0 1 0 0 1 1 1 1 IS1 transposase TERT_thumb PF17984.1 gi|73670611|ref|YP_306626.1| - 0.05 13.5 0.1 0.054 13.4 0.1 1.1 1 0 0 1 1 1 0 Telomerase reverse transcriptase thumb DNA binding domain PqqD PF05402.12 gi|73670613|ref|YP_306628.1| - 1.8e-11 44.2 0.0 2.8e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 Coenzyme PQQ synthesis protein D (PqqD) B12-binding PF02310.19 gi|73670614|ref|YP_306629.1| - 5.2e-19 68.5 0.0 1.1e-18 67.5 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain Radical_SAM PF04055.21 gi|73670614|ref|YP_306629.1| - 3.2e-18 66.7 0.1 1.9e-17 64.1 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Rsbr_N PF08678.10 gi|73670615|ref|YP_306630.1| - 0.018 15.1 0.4 0.027 14.5 0.4 1.3 1 0 0 1 1 1 0 Rsbr N terminal PolyA_pol PF01743.20 gi|73670616|ref|YP_306631.1| - 1.9e-19 70.4 0.0 3.9e-19 69.3 0.0 1.6 1 0 0 1 1 1 1 Poly A polymerase head domain HD PF01966.22 gi|73670616|ref|YP_306631.1| - 2.7e-08 34.1 0.1 5e-08 33.2 0.1 1.5 1 0 0 1 1 1 1 HD domain PolyA_pol_RNAbd PF12627.7 gi|73670616|ref|YP_306631.1| - 0.0071 16.1 0.0 0.019 14.8 0.0 1.7 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A DUF3578 PF12102.8 gi|73670617|ref|YP_306632.1| - 0.033 13.8 4.6 1.4 8.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3578) Terminase_5 PF06056.12 gi|73670618|ref|YP_306633.1| - 2.3e-06 27.4 0.0 4.9e-06 26.3 0.0 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_23 PF13384.6 gi|73670618|ref|YP_306633.1| - 2.3e-06 27.2 0.0 4.2e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain DDE_Tnp_IS1 PF03400.13 gi|73670618|ref|YP_306633.1| - 8e-05 23.0 0.0 0.0002 21.7 0.0 1.7 1 1 0 1 1 1 1 IS1 transposase HTH_28 PF13518.6 gi|73670618|ref|YP_306633.1| - 0.00019 21.5 0.0 0.00032 20.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|73670618|ref|YP_306633.1| - 0.0028 17.4 0.0 0.0052 16.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|73670618|ref|YP_306633.1| - 0.0033 17.1 0.0 0.015 14.9 0.0 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_29 PF13551.6 gi|73670618|ref|YP_306633.1| - 0.018 15.0 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix TnsD PF15978.5 gi|73670618|ref|YP_306633.1| - 0.019 14.0 0.0 0.038 13.0 0.0 1.5 1 1 0 1 1 1 0 Tn7-like transposition protein D Zn_Tnp_IS1595 PF12760.7 gi|73670618|ref|YP_306633.1| - 0.023 14.6 3.5 0.04 13.9 3.5 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|73670618|ref|YP_306633.1| - 0.026 14.6 2.4 0.73 10.0 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain Zn_Tnp_IS1 PF03811.13 gi|73670618|ref|YP_306633.1| - 0.027 14.2 5.2 0.058 13.1 5.2 1.6 1 0 0 1 1 1 0 InsA N-terminal domain DUF1670 PF07900.11 gi|73670618|ref|YP_306633.1| - 0.036 13.4 0.1 0.2 11.0 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1670) zinc-ribbons_6 PF07191.12 gi|73670618|ref|YP_306633.1| - 0.036 14.0 0.5 0.099 12.6 0.5 1.8 1 0 0 1 1 1 0 zinc-ribbons HTH_Tnp_1 PF01527.20 gi|73670618|ref|YP_306633.1| - 0.067 13.5 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 Transposase zf-Mss51 PF13824.6 gi|73670618|ref|YP_306633.1| - 0.53 10.4 4.0 1.2 9.3 2.8 2.3 2 1 0 2 2 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Rubredoxin PF00301.20 gi|73670618|ref|YP_306633.1| - 0.63 10.1 2.8 1.4 9.0 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin zf-ISL3 PF14690.6 gi|73670618|ref|YP_306633.1| - 5.4 7.8 9.8 5.7 7.7 1.0 2.6 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PriA_CRR PF18319.1 gi|73670618|ref|YP_306633.1| - 7.6 6.6 8.0 5.2 7.2 2.0 2.4 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain TERT_thumb PF17984.1 gi|73670619|ref|YP_306634.1| - 0.052 13.4 0.3 0.056 13.3 0.3 1.0 1 0 0 1 1 1 0 Telomerase reverse transcriptase thumb DNA binding domain DDE_Tnp_IS1 PF03400.13 gi|73670619|ref|YP_306634.1| - 0.06 13.7 0.2 0.06 13.7 0.2 1.1 1 0 0 1 1 1 0 IS1 transposase Cpn60_TCP1 PF00118.24 gi|73670620|ref|YP_306635.1| - 5.1e-161 536.6 13.2 5.9e-161 536.4 13.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GARS_A PF01071.19 gi|73670620|ref|YP_306635.1| - 0.02 14.7 0.2 0.053 13.3 0.2 1.7 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Alba PF01918.21 gi|73670620|ref|YP_306635.1| - 0.023 14.5 0.3 0.11 12.4 0.1 2.3 2 0 0 2 2 2 0 Alba GlcNAc-1_reg PF18440.1 gi|73670620|ref|YP_306635.1| - 0.073 13.3 1.1 1.3 9.3 0.1 3.1 3 0 0 3 3 3 0 Putative GlcNAc-1 phosphotransferase regulatory domain Rib_5-P_isom_A PF06026.14 gi|73670621|ref|YP_306636.1| - 2.9e-63 212.6 0.1 3.7e-63 212.2 0.1 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|73670621|ref|YP_306636.1| - 8.5e-07 29.0 0.5 0.0011 18.9 0.0 2.2 1 1 1 2 2 2 2 DeoR C terminal sensor domain Sugar-bind PF04198.13 gi|73670621|ref|YP_306636.1| - 0.015 14.5 0.2 0.023 13.8 0.2 1.4 1 1 0 1 1 1 0 Putative sugar-binding domain tRNA-synt_2 PF00152.20 gi|73670622|ref|YP_306637.1| - 2.7e-91 305.9 0.3 3.3e-91 305.7 0.3 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|73670622|ref|YP_306637.1| - 1.4e-14 53.8 0.2 2.6e-14 52.9 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|73670622|ref|YP_306637.1| - 0.00022 20.8 0.5 0.04 13.4 0.0 2.9 3 0 0 3 3 3 1 tRNA synthetases class II core domain (F) EC042_2821 PF18740.1 gi|73670622|ref|YP_306637.1| - 0.073 12.9 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 EC042_2821-lke REase Med30 PF11315.8 gi|73670622|ref|YP_306637.1| - 0.15 12.3 0.0 0.32 11.2 0.0 1.5 1 0 0 1 1 1 0 Mediator complex subunit 30 Metallophos PF00149.28 gi|73670623|ref|YP_306638.1| - 2.6e-12 47.7 1.0 3.6e-12 47.2 1.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|73670623|ref|YP_306638.1| - 3.3e-10 40.4 0.0 5.3e-10 39.7 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|73670623|ref|YP_306638.1| - 0.012 15.0 0.1 4.8 6.4 0.0 2.6 2 1 0 2 2 2 0 Metallophosphoesterase, calcineurin superfamily Ammonium_transp PF00909.21 gi|73670624|ref|YP_306639.1| - 1.9e-123 412.1 37.8 2.3e-123 411.8 37.8 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF3810 PF12725.7 gi|73670624|ref|YP_306639.1| - 2.4 7.4 4.9 2 7.7 1.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3810) CbtB PF09489.10 gi|73670624|ref|YP_306639.1| - 3.3 7.9 9.4 32 4.7 0.0 4.8 4 0 0 4 4 4 0 Probable cobalt transporter subunit (CbtB) Epiglycanin_C PF14654.6 gi|73670624|ref|YP_306639.1| - 7.6 6.7 8.6 3.5 7.7 0.3 3.3 3 0 0 3 3 3 0 Mucin, catalytic, TM and cytoplasmic tail region P-II PF00543.22 gi|73670625|ref|YP_306640.1| - 3.8e-39 133.4 0.8 4.3e-39 133.2 0.8 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Pribosyltran PF00156.27 gi|73670627|ref|YP_306642.1| - 4.5e-21 75.0 0.0 6e-21 74.6 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|73670627|ref|YP_306642.1| - 0.029 13.8 0.0 0.039 13.4 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Dynein_light PF01221.18 gi|73670628|ref|YP_306643.1| - 1.5 9.2 7.1 9.4 6.6 0.4 3.0 2 2 0 2 2 2 0 Dynein light chain type 1 TPP_enzyme_C PF02775.21 gi|73670629|ref|YP_306644.1| - 5.1e-25 88.0 0.1 7.7e-25 87.5 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DUF711 PF05167.12 gi|73670630|ref|YP_306645.1| - 3.2e-183 609.2 9.3 4e-183 608.9 9.3 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) ACT_6 PF13740.6 gi|73670631|ref|YP_306646.1| - 1.5e-16 60.1 0.4 1.7e-16 59.9 0.4 1.0 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|73670631|ref|YP_306646.1| - 1.8e-08 34.0 0.7 2.4e-08 33.6 0.7 1.2 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|73670631|ref|YP_306646.1| - 2.3e-05 24.9 0.9 4.3e-05 24.0 0.9 1.4 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.6 gi|73670631|ref|YP_306646.1| - 0.083 12.7 0.9 0.13 12.0 0.9 1.4 1 0 0 1 1 1 0 ACT domain SKI PF01202.22 gi|73670632|ref|YP_306647.1| - 4.8e-34 117.8 0.1 5.8e-34 117.5 0.1 1.0 1 0 0 1 1 1 1 Shikimate kinase Cytidylate_kin PF02224.18 gi|73670632|ref|YP_306647.1| - 1.2e-07 31.7 0.0 1.8e-07 31.1 0.0 1.4 1 1 0 1 1 1 1 Cytidylate kinase AAA_18 PF13238.6 gi|73670632|ref|YP_306647.1| - 2e-07 31.6 0.0 2.7e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|73670632|ref|YP_306647.1| - 9.8e-07 29.0 0.0 1.3e-06 28.6 0.0 1.3 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 gi|73670632|ref|YP_306647.1| - 1.2e-06 28.7 0.5 3.5e-06 27.3 0.1 1.8 1 1 1 2 2 2 1 Cytidylate kinase-like family AAA_17 PF13207.6 gi|73670632|ref|YP_306647.1| - 0.00011 22.7 0.1 0.00048 20.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|73670632|ref|YP_306647.1| - 0.0002 21.3 0.1 0.4 10.5 0.0 2.1 2 0 0 2 2 2 2 Deoxynucleoside kinase AAA PF00004.29 gi|73670632|ref|YP_306647.1| - 0.0013 19.1 0.4 0.0047 17.3 0.4 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) CoaE PF01121.20 gi|73670632|ref|YP_306647.1| - 0.0054 16.4 0.1 0.0074 16.0 0.1 1.4 1 1 0 1 1 1 1 Dephospho-CoA kinase Zeta_toxin PF06414.12 gi|73670632|ref|YP_306647.1| - 0.018 14.3 0.0 0.023 14.0 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin Thymidylate_kin PF02223.17 gi|73670632|ref|YP_306647.1| - 0.019 14.7 0.1 0.047 13.4 0.0 1.6 2 0 0 2 2 2 0 Thymidylate kinase AAA_28 PF13521.6 gi|73670632|ref|YP_306647.1| - 0.02 15.1 0.0 0.046 14.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|73670632|ref|YP_306647.1| - 0.022 15.1 0.0 0.032 14.6 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|73670632|ref|YP_306647.1| - 0.074 13.6 0.5 0.099 13.2 0.5 1.6 1 1 0 1 1 1 0 ABC transporter APS_kinase PF01583.20 gi|73670632|ref|YP_306647.1| - 0.078 12.9 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase DUF2283 PF10049.9 gi|73670632|ref|YP_306647.1| - 0.099 12.9 0.0 0.23 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2283) AAA_22 PF13401.6 gi|73670632|ref|YP_306647.1| - 0.11 12.7 0.3 0.2 11.9 0.3 1.9 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|73670632|ref|YP_306647.1| - 0.14 11.3 0.5 0.4 9.8 0.2 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_23 PF13476.6 gi|73670632|ref|YP_306647.1| - 0.16 12.5 1.7 7.5 7.0 1.7 2.1 1 1 0 1 1 1 0 AAA domain ADK PF00406.22 gi|73670632|ref|YP_306647.1| - 0.17 12.0 0.2 0.77 9.8 0.0 1.9 2 0 0 2 2 2 0 Adenylate kinase TsaE PF02367.17 gi|73670632|ref|YP_306647.1| - 0.17 11.9 0.1 0.32 11.0 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MMR_HSR1 PF01926.23 gi|73670632|ref|YP_306647.1| - 0.18 11.9 0.1 0.25 11.4 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase NAD_binding_8 PF13450.6 gi|73670634|ref|YP_306649.1| - 5e-19 68.3 0.1 9.3e-19 67.4 0.1 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 gi|73670634|ref|YP_306649.1| - 7.1e-14 51.9 0.0 7.7e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 gi|73670634|ref|YP_306649.1| - 2.5e-10 40.3 0.0 3.1e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|73670634|ref|YP_306649.1| - 6.5e-10 38.7 0.4 1e-09 38.0 0.4 1.3 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|73670634|ref|YP_306649.1| - 1.1e-08 35.1 0.2 5.2e-08 32.9 0.1 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|73670634|ref|YP_306649.1| - 6.4e-08 31.7 0.4 1.3e-07 30.7 0.1 1.6 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|73670634|ref|YP_306649.1| - 1.3e-06 27.8 0.2 2e-06 27.3 0.2 1.2 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 gi|73670634|ref|YP_306649.1| - 1.7e-06 27.5 0.2 2.5e-06 27.0 0.2 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|73670634|ref|YP_306649.1| - 2.8e-06 26.8 0.0 3.3e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GDI PF00996.18 gi|73670634|ref|YP_306649.1| - 3.7e-06 25.7 0.4 5.8e-06 25.1 0.4 1.3 1 0 0 1 1 1 1 GDP dissociation inhibitor Pyr_redox PF00070.27 gi|73670634|ref|YP_306649.1| - 1.6e-05 25.3 0.2 4.4e-05 24.0 0.2 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|73670634|ref|YP_306649.1| - 0.0001 21.6 0.8 0.00017 20.8 0.4 1.6 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|73670634|ref|YP_306649.1| - 0.0012 18.2 0.1 0.0017 17.7 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|73670634|ref|YP_306649.1| - 0.0013 18.1 0.0 0.0016 17.7 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|73670634|ref|YP_306649.1| - 0.0069 15.5 0.1 0.0088 15.1 0.1 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|73670634|ref|YP_306649.1| - 0.014 14.2 0.2 0.021 13.7 0.2 1.2 1 0 0 1 1 1 0 Tryptophan halogenase ApbA PF02558.16 gi|73670634|ref|YP_306649.1| - 0.045 13.4 0.2 0.08 12.6 0.2 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA MCRA PF06100.11 gi|73670634|ref|YP_306649.1| - 0.058 12.2 0.1 0.08 11.7 0.1 1.2 1 0 0 1 1 1 0 MCRA family UDPG_MGDP_dh_N PF03721.14 gi|73670634|ref|YP_306649.1| - 0.16 11.6 0.4 0.25 10.9 0.4 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|73670634|ref|YP_306649.1| - 0.21 11.8 0.1 0.33 11.2 0.1 1.3 1 0 0 1 1 1 0 TrkA-N domain Trm56 PF01994.16 gi|73670636|ref|YP_306651.1| - 1.4e-49 166.9 0.0 1.7e-49 166.7 0.0 1.1 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 Glycos_transf_3 PF00591.21 gi|73670637|ref|YP_306652.1| - 1e-14 54.8 0.1 7.1e-14 52.0 0.1 2.1 1 1 0 1 1 1 1 Glycosyl transferase family, a/b domain PYNP_C PF07831.13 gi|73670637|ref|YP_306652.1| - 1.1e-13 50.6 0.1 2.3e-13 49.6 0.1 1.6 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_trans_3N PF02885.17 gi|73670637|ref|YP_306652.1| - 6.2e-13 48.4 0.1 1.9e-12 46.8 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain Molydop_binding PF01568.21 gi|73670637|ref|YP_306652.1| - 2e-05 24.6 0.1 8.2e-05 22.6 0.0 1.9 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain DUF2254 PF10011.9 gi|73670637|ref|YP_306652.1| - 0.0097 14.8 0.0 0.014 14.2 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) Biotin_lipoyl PF00364.22 gi|73670637|ref|YP_306652.1| - 0.012 15.4 0.1 0.12 12.2 0.1 2.8 2 0 0 2 2 2 0 Biotin-requiring enzyme CDC48_N PF02359.18 gi|73670637|ref|YP_306652.1| - 0.018 15.2 0.0 0.051 13.8 0.0 1.7 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain HlyD_3 PF13437.6 gi|73670637|ref|YP_306652.1| - 0.063 14.0 0.0 0.29 11.8 0.0 2.1 2 0 0 2 2 2 0 HlyD family secretion protein Muted PF14942.6 gi|73670637|ref|YP_306652.1| - 0.17 12.3 0.0 0.31 11.4 0.0 1.4 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Phage_holin_3_6 PF07332.11 gi|73670638|ref|YP_306653.1| - 0.027 14.5 1.6 0.027 14.5 1.6 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III ABC2_membrane PF01061.24 gi|73670638|ref|YP_306653.1| - 0.045 13.2 2.2 0.047 13.1 2.2 1.0 1 0 0 1 1 1 0 ABC-2 type transporter Tad PF13400.6 gi|73670638|ref|YP_306653.1| - 3.5 8.0 7.2 0.5 10.7 0.5 2.0 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like GATase_3 PF07685.14 gi|73670640|ref|YP_306655.1| - 8.3e-51 172.4 0.1 1.3e-50 171.7 0.1 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|73670640|ref|YP_306655.1| - 3.1e-21 75.7 0.0 7.6e-21 74.5 0.0 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|73670640|ref|YP_306655.1| - 5.5e-19 68.8 0.1 5.6e-18 65.5 0.1 2.1 1 1 0 1 1 1 1 AAA domain GATase PF00117.28 gi|73670640|ref|YP_306655.1| - 6.4e-06 26.1 0.0 1.6e-05 24.8 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|73670640|ref|YP_306655.1| - 0.0014 18.5 0.0 0.0025 17.7 0.0 1.4 1 0 0 1 1 1 1 SNO glutamine amidotransferase family DUF1611 PF07755.11 gi|73670640|ref|YP_306655.1| - 0.13 11.5 0.0 4.6 6.5 0.0 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF1611_C) P-loop domain Peptidase_C26 PF07722.13 gi|73670640|ref|YP_306655.1| - 0.19 11.5 0.0 0.36 10.5 0.0 1.4 1 0 0 1 1 1 0 Peptidase C26 OCD_Mu_crystall PF02423.15 gi|73670641|ref|YP_306656.1| - 4.1e-113 377.5 0.1 4.5e-113 377.4 0.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|73670641|ref|YP_306656.1| - 1e-06 28.9 0.0 1.7e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Semialdhyde_dh PF01118.24 gi|73670641|ref|YP_306656.1| - 0.0035 17.8 0.0 0.12 12.8 0.0 2.4 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 gi|73670641|ref|YP_306656.1| - 0.013 14.8 0.1 0.023 14.0 0.1 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F420_oxidored PF03807.17 gi|73670641|ref|YP_306656.1| - 0.039 14.5 0.0 0.078 13.6 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent MinC_C PF03775.16 gi|73670641|ref|YP_306656.1| - 0.062 13.3 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Septum formation inhibitor MinC, C-terminal domain 2-Hacid_dh PF00389.30 gi|73670641|ref|YP_306656.1| - 0.15 11.7 0.1 0.32 10.7 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PuR_N PF09182.10 gi|73670641|ref|YP_306656.1| - 0.17 11.9 0.0 1.8 8.6 0.0 2.5 3 0 0 3 3 3 0 Bacterial purine repressor, N-terminal DUF5616 PF18481.1 gi|73670642|ref|YP_306657.1| - 1.6e-46 158.1 0.0 2.2e-46 157.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5616) DUF434 PF04256.12 gi|73670642|ref|YP_306657.1| - 6.4e-17 61.0 0.2 3e-16 58.8 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF434) DUF1940 PF09155.10 gi|73670642|ref|YP_306657.1| - 0.072 13.2 0.1 0.14 12.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1940) TPR_17 PF13431.6 gi|73670643|ref|YP_306658.1| - 5e-34 114.2 7.8 1.4e-06 28.3 0.5 6.4 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670643|ref|YP_306658.1| - 1.9e-28 96.2 25.2 1.8e-05 24.5 0.3 8.2 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670643|ref|YP_306658.1| - 1.5e-21 76.7 14.2 0.00014 22.5 0.0 5.2 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73670643|ref|YP_306658.1| - 3.9e-21 73.9 17.1 0.00012 21.7 0.3 7.7 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670643|ref|YP_306658.1| - 2.6e-20 72.7 9.1 0.00014 22.3 0.2 5.5 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670643|ref|YP_306658.1| - 5.2e-20 70.8 16.4 2.8e-05 23.7 0.1 7.3 4 1 3 7 7 7 6 TPR repeat TPR_14 PF13428.6 gi|73670643|ref|YP_306658.1| - 5.2e-19 67.3 15.0 0.0074 17.0 0.3 8.0 1 1 7 8 8 8 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670643|ref|YP_306658.1| - 7e-19 66.4 15.2 0.004 17.2 0.2 7.7 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670643|ref|YP_306658.1| - 2e-13 50.4 23.3 5.4e-06 26.6 2.0 5.8 2 2 4 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670643|ref|YP_306658.1| - 3.7e-07 30.2 5.3 0.065 13.4 0.1 4.2 1 1 4 5 5 5 3 Tetratricopeptide repeat TPR_15 PF13429.6 gi|73670643|ref|YP_306658.1| - 2.7e-05 23.5 2.3 0.013 14.7 0.0 3.4 1 1 3 4 4 4 2 Tetratricopeptide repeat TPR_20 PF14561.6 gi|73670643|ref|YP_306658.1| - 0.00015 22.1 1.7 1.8 8.9 0.0 4.0 3 3 1 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670643|ref|YP_306658.1| - 0.00043 20.1 21.8 0.16 11.9 0.1 5.7 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_3 PF07720.12 gi|73670643|ref|YP_306658.1| - 0.0007 19.5 11.0 0.001 19.0 0.0 3.9 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_4 PF07721.14 gi|73670643|ref|YP_306658.1| - 0.0014 19.0 3.6 21 6.1 0.5 5.4 6 0 0 6 6 5 0 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73670643|ref|YP_306658.1| - 0.0025 18.0 13.1 0.27 11.5 0.9 3.8 1 1 4 5 5 5 2 Anaphase-promoting complex, cyclosome, subunit 3 DUF4192 PF13830.6 gi|73670643|ref|YP_306658.1| - 0.0095 16.0 0.0 4.3 7.3 0.0 3.2 3 0 0 3 3 3 1 Domain of unknown function (DUF4192) TPR_7 PF13176.6 gi|73670643|ref|YP_306658.1| - 0.016 15.2 14.1 5.7 7.2 0.2 5.7 6 0 0 6 6 6 0 Tetratricopeptide repeat DUF627 PF04781.12 gi|73670643|ref|YP_306658.1| - 0.11 12.5 2.0 1.4 9.0 0.1 3.3 2 2 2 4 4 4 0 Protein of unknown function (DUF627) TPR_6 PF13174.6 gi|73670643|ref|YP_306658.1| - 0.12 13.1 12.3 30 5.5 0.4 6.1 7 0 0 7 7 7 0 Tetratricopeptide repeat BTAD PF03704.17 gi|73670643|ref|YP_306658.1| - 0.12 12.7 8.6 0.23 11.9 1.9 3.1 2 1 1 3 3 2 0 Bacterial transcriptional activator domain TPR_21 PF09976.9 gi|73670643|ref|YP_306658.1| - 0.27 10.9 7.5 2.9 7.5 0.2 4.5 3 3 2 5 5 5 0 Tetratricopeptide repeat-like domain Mad3_BUB1_I PF08311.12 gi|73670643|ref|YP_306658.1| - 0.51 10.3 3.6 12 5.9 0.1 4.0 4 0 0 4 4 4 0 Mad3/BUB1 homology region 1 DUF4219 PF13961.6 gi|73670644|ref|YP_306659.1| - 0.015 15.0 2.2 0.062 13.0 2.2 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4219) CARD PF00619.21 gi|73670644|ref|YP_306659.1| - 0.066 13.3 0.4 0.19 11.8 0.1 1.9 2 0 0 2 2 2 0 Caspase recruitment domain Metallophos PF00149.28 gi|73670645|ref|YP_306660.1| - 7.3e-25 88.7 0.1 1e-24 88.2 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|73670645|ref|YP_306660.1| - 2.1e-06 28.1 0.0 2.8e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|73670645|ref|YP_306660.1| - 0.052 12.9 0.0 0.08 12.2 0.0 1.2 1 0 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily TPR_2 PF07719.17 gi|73670646|ref|YP_306661.1| - 1.1e-41 137.6 30.1 3.8e-06 26.6 0.0 9.4 9 0 0 9 9 9 9 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73670646|ref|YP_306661.1| - 6.7e-41 135.8 15.0 1.5e-05 25.0 0.0 9.1 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670646|ref|YP_306661.1| - 1.4e-37 124.7 18.5 0.00051 20.0 0.1 9.5 9 0 0 9 9 9 9 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670646|ref|YP_306661.1| - 2e-32 110.6 26.3 3.8e-06 26.5 0.0 9.2 3 3 6 9 9 9 8 TPR repeat TPR_1 PF00515.28 gi|73670646|ref|YP_306661.1| - 1.3e-27 94.5 27.8 0.0097 15.7 0.4 9.8 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670646|ref|YP_306661.1| - 2.4e-27 95.2 17.2 1.1e-06 29.1 0.2 6.0 2 2 4 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73670646|ref|YP_306661.1| - 1.1e-26 91.2 19.2 0.0071 17.1 0.2 9.2 1 1 8 9 9 9 9 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670646|ref|YP_306661.1| - 3.6e-24 85.1 22.8 1e-06 29.3 1.7 5.5 5 1 1 6 6 6 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670646|ref|YP_306661.1| - 5.6e-20 71.4 24.5 2.4e-05 24.6 2.6 6.9 3 1 4 7 7 7 7 Tetratricopeptide repeat TPR_15 PF13429.6 gi|73670646|ref|YP_306661.1| - 2.5e-13 49.9 2.1 1.1e-06 28.1 0.0 4.1 1 1 4 5 5 5 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670646|ref|YP_306661.1| - 5.2e-11 41.8 20.5 0.11 12.6 0.7 8.4 9 0 0 9 9 8 2 Tetratricopeptide repeat TPR_4 PF07721.14 gi|73670646|ref|YP_306661.1| - 8e-11 41.5 2.2 3.5 8.5 0.5 7.4 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|73670646|ref|YP_306661.1| - 3.5e-08 33.5 10.3 0.17 12.1 0.1 5.5 1 1 5 7 7 7 6 Tetratricopeptide repeat DUF627 PF04781.12 gi|73670646|ref|YP_306661.1| - 1.3e-07 31.6 4.7 0.46 10.5 0.0 4.9 6 0 0 6 6 5 3 Protein of unknown function (DUF627) TPR_10 PF13374.6 gi|73670646|ref|YP_306661.1| - 5.6e-07 29.2 25.8 1.8 8.6 0.5 7.8 8 0 0 8 8 8 4 Tetratricopeptide repeat BTAD PF03704.17 gi|73670646|ref|YP_306661.1| - 0.00038 20.9 14.9 2 8.8 0.0 4.2 1 1 4 6 6 6 4 Bacterial transcriptional activator domain TPR_21 PF09976.9 gi|73670646|ref|YP_306661.1| - 0.0023 17.6 10.1 5.9 6.6 0.3 6.2 4 2 3 7 7 7 1 Tetratricopeptide repeat-like domain TPR_20 PF14561.6 gi|73670646|ref|YP_306661.1| - 0.011 16.1 4.9 2.1 8.8 0.1 4.1 2 2 1 4 4 4 0 Tetratricopeptide repeat NARP1 PF12569.8 gi|73670646|ref|YP_306661.1| - 0.014 14.4 7.3 0.59 9.0 0.5 4.0 1 1 4 5 5 5 0 NMDA receptor-regulated protein 1 TPR_6 PF13174.6 gi|73670646|ref|YP_306661.1| - 0.017 15.7 14.9 1.6 9.6 0.0 6.5 8 0 0 8 8 7 0 Tetratricopeptide repeat TPR_3 PF07720.12 gi|73670646|ref|YP_306661.1| - 0.021 14.8 4.6 1.5 8.9 0.0 4.7 4 0 0 4 4 4 0 Tetratricopeptide repeat SMC_N PF02463.19 gi|73670646|ref|YP_306661.1| - 0.18 11.3 0.0 0.29 10.6 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain ANAPC3 PF12895.7 gi|73670646|ref|YP_306661.1| - 0.25 11.6 15.4 4.6 7.5 1.6 4.7 2 2 2 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 DUF4810 PF16068.5 gi|73670646|ref|YP_306661.1| - 0.29 11.7 8.7 21 5.7 0.1 5.4 4 1 2 6 6 6 0 Domain of unknown function (DUF4810) FxsA PF04186.13 gi|73670647|ref|YP_306662.1| - 1.5e-33 115.1 4.7 2e-33 114.8 4.7 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein LrgB PF04172.16 gi|73670648|ref|YP_306663.1| - 1.1e-80 270.2 16.7 1.3e-80 270.0 16.7 1.0 1 0 0 1 1 1 1 LrgB-like family CbtA PF09490.10 gi|73670648|ref|YP_306663.1| - 0.024 14.4 0.5 0.024 14.4 0.5 2.9 4 0 0 4 4 4 0 Probable cobalt transporter subunit (CbtA) DUF2953 PF11167.8 gi|73670648|ref|YP_306663.1| - 1.5 9.0 7.0 5.8 7.1 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2953) LrgA PF03788.14 gi|73670649|ref|YP_306664.1| - 8.6e-28 96.1 7.7 1.1e-27 95.8 7.7 1.1 1 0 0 1 1 1 1 LrgA family DUF2101 PF09874.9 gi|73670649|ref|YP_306664.1| - 0.068 12.9 4.4 0.092 12.4 4.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Tetraspanin PF00335.20 gi|73670649|ref|YP_306664.1| - 1.1 9.0 4.5 0.15 11.7 0.5 1.5 2 0 0 2 2 2 0 Tetraspanin family Aminotran_5 PF00266.19 gi|73670650|ref|YP_306665.1| - 3.9e-84 282.8 0.0 5.5e-84 282.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|73670650|ref|YP_306665.1| - 3.2e-09 36.5 0.0 4.7e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|73670650|ref|YP_306665.1| - 9.6e-05 21.8 0.0 0.00014 21.3 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pyridoxal_deC PF00282.19 gi|73670650|ref|YP_306665.1| - 0.12 11.1 0.0 0.18 10.5 0.0 1.2 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain NifU_N PF01592.16 gi|73670651|ref|YP_306666.1| - 6.5e-45 152.4 0.0 7.7e-45 152.2 0.0 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain CO_deh_flav_C PF03450.17 gi|73670651|ref|YP_306666.1| - 0.12 12.5 0.2 0.23 11.7 0.2 1.5 1 1 0 1 1 1 0 CO dehydrogenase flavoprotein C-terminal domain RimK PF08443.11 gi|73670652|ref|YP_306667.1| - 5.5e-23 81.5 0.0 3.7e-21 75.6 0.0 2.5 1 1 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|73670652|ref|YP_306667.1| - 6.6e-15 54.9 0.0 1.4e-14 53.9 0.0 1.5 1 1 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|73670652|ref|YP_306667.1| - 3.3e-09 36.4 0.0 9.2e-09 34.9 0.0 1.7 1 1 0 1 1 1 1 YheC/D like ATP-grasp Rimk_N PF18030.1 gi|73670652|ref|YP_306667.1| - 6.3e-08 32.9 0.0 1.7e-07 31.5 0.0 1.8 1 0 0 1 1 1 1 RimK PreATP-grasp domain ATP-grasp_3 PF02655.14 gi|73670652|ref|YP_306667.1| - 3e-05 24.1 0.0 6.2e-05 23.1 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|73670652|ref|YP_306667.1| - 4.3e-05 22.9 0.0 0.00021 20.6 0.0 2.1 2 1 0 2 2 2 1 Sugar-transfer associated ATP-grasp Asparaginase_C PF17763.1 gi|73670652|ref|YP_306667.1| - 0.055 13.7 0.1 0.15 12.3 0.0 1.7 2 0 0 2 2 2 0 Glutaminase/Asparaginase C-terminal domain ATP-grasp PF02222.22 gi|73670652|ref|YP_306667.1| - 0.11 12.0 0.0 0.24 11.0 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|73670652|ref|YP_306667.1| - 0.11 11.9 0.0 0.26 10.7 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain PTH2 PF01981.16 gi|73670653|ref|YP_306668.1| - 1.9e-39 134.6 0.1 2.1e-39 134.5 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 SAP PF02037.27 gi|73670653|ref|YP_306668.1| - 0.076 12.8 0.3 1.7 8.5 0.1 2.5 2 0 0 2 2 2 0 SAP domain TP_methylase PF00590.20 gi|73670653|ref|YP_306668.1| - 0.095 12.6 0.1 0.33 10.8 0.0 1.7 2 0 0 2 2 2 0 Tetrapyrrole (Corrin/Porphyrin) Methylases Transglut_core PF01841.19 gi|73670654|ref|YP_306669.1| - 4.2e-07 30.4 0.0 9.5e-07 29.3 0.0 1.6 1 1 0 1 1 1 1 Transglutaminase-like superfamily TruD PF01142.18 gi|73670655|ref|YP_306670.1| - 1.9e-159 531.0 0.1 2.2e-159 530.8 0.1 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) MatE PF01554.18 gi|73670656|ref|YP_306671.1| - 8.1e-31 106.8 42.4 3.9e-20 72.1 13.2 2.8 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|73670656|ref|YP_306671.1| - 1.4e-09 38.1 28.2 2.2e-08 34.3 13.8 4.1 4 1 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain HKR_ArcB_TM PF18415.1 gi|73670656|ref|YP_306671.1| - 0.14 13.0 5.0 0.13 13.1 1.5 2.9 2 0 0 2 2 2 0 Histidine kinase receptor ArcB trans-membrane domain ABC2_membrane_3 PF12698.7 gi|73670657|ref|YP_306672.1| - 0.46 9.5 26.1 1 8.4 25.8 1.8 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF2534 PF10749.9 gi|73670657|ref|YP_306672.1| - 6.7 7.0 10.0 0.097 12.9 0.6 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2534) Peptidase_M1 PF01433.20 gi|73670658|ref|YP_306673.1| - 2.2e-08 34.0 0.0 4.1e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain Cyclase_polyket PF04673.12 gi|73670658|ref|YP_306673.1| - 0.049 13.9 0.3 0.097 12.9 0.3 1.5 1 0 0 1 1 1 0 Polyketide synthesis cyclase ABC_tran PF00005.27 gi|73670659|ref|YP_306674.1| - 6.8e-35 120.6 0.0 6.7e-34 117.3 0.0 2.0 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|73670659|ref|YP_306674.1| - 8.6e-12 45.5 0.7 5.6e-05 23.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|73670659|ref|YP_306674.1| - 0.00013 21.9 0.0 0.0006 19.6 0.0 1.8 1 1 1 2 2 2 1 AAA ATPase domain AAA_33 PF13671.6 gi|73670659|ref|YP_306674.1| - 0.00014 22.1 0.1 0.0009 19.4 0.1 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|73670659|ref|YP_306674.1| - 0.00032 20.2 0.2 0.74 9.2 0.1 2.3 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|73670659|ref|YP_306674.1| - 0.002 18.4 0.2 0.0067 16.7 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|73670659|ref|YP_306674.1| - 0.002 17.9 0.1 0.0076 16.0 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|73670659|ref|YP_306674.1| - 0.0022 18.5 1.4 0.0067 17.0 1.4 1.7 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|73670659|ref|YP_306674.1| - 0.004 17.2 0.0 0.0069 16.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|73670659|ref|YP_306674.1| - 0.007 16.8 0.0 0.014 15.8 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|73670659|ref|YP_306674.1| - 0.012 16.0 0.0 0.02 15.3 0.0 1.4 1 0 0 1 1 1 0 RNA helicase TsaE PF02367.17 gi|73670659|ref|YP_306674.1| - 0.016 15.2 0.0 0.027 14.5 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 gi|73670659|ref|YP_306674.1| - 0.023 14.6 0.0 0.038 13.9 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|73670659|ref|YP_306674.1| - 0.024 14.5 0.0 0.14 12.1 0.0 2.1 2 1 0 2 2 2 0 RsgA GTPase AAA_18 PF13238.6 gi|73670659|ref|YP_306674.1| - 0.048 14.2 0.0 0.092 13.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|73670659|ref|YP_306674.1| - 0.05 13.7 0.1 0.09 12.9 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_29 PF13555.6 gi|73670659|ref|YP_306674.1| - 0.06 13.1 0.1 0.13 12.0 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MobB PF03205.14 gi|73670659|ref|YP_306674.1| - 0.063 13.2 0.4 0.12 12.3 0.1 1.6 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 gi|73670659|ref|YP_306674.1| - 0.075 12.7 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|73670659|ref|YP_306674.1| - 0.075 13.4 0.0 0.13 12.7 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain DUF87 PF01935.17 gi|73670659|ref|YP_306674.1| - 0.089 12.9 0.4 0.2 11.7 0.4 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain Zeta_toxin PF06414.12 gi|73670659|ref|YP_306674.1| - 0.11 11.8 0.0 0.19 11.0 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.12 gi|73670659|ref|YP_306674.1| - 0.13 12.2 0.2 0.25 11.2 0.2 1.5 1 0 0 1 1 1 0 NACHT domain SRP54 PF00448.22 gi|73670659|ref|YP_306674.1| - 0.2 11.3 0.1 0.31 10.7 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain UPF0114 PF03350.16 gi|73670660|ref|YP_306675.1| - 2.3e-25 89.1 4.4 3.7e-25 88.4 4.4 1.3 1 0 0 1 1 1 1 Uncharacterized protein family, UPF0114 YrhK PF14145.6 gi|73670660|ref|YP_306675.1| - 1.3 8.9 5.8 12 5.9 0.1 3.1 2 1 0 2 2 2 0 YrhK-like protein Peptidase_M10 PF00413.24 gi|73670661|ref|YP_306676.1| - 1.4e-14 54.2 0.0 4.7e-14 52.5 0.0 1.7 1 1 0 1 1 1 1 Matrixin Reprolysin_4 PF13583.6 gi|73670661|ref|YP_306676.1| - 0.0042 16.8 0.0 0.006 16.3 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Astacin PF01400.24 gi|73670661|ref|YP_306676.1| - 0.0064 16.1 0.0 0.011 15.3 0.0 1.4 1 0 0 1 1 1 1 Astacin (Peptidase family M12A) Peptidase_M66 PF10462.9 gi|73670661|ref|YP_306676.1| - 0.0095 14.9 0.0 0.012 14.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase M66 Reprolysin_5 PF13688.6 gi|73670661|ref|YP_306676.1| - 0.012 15.7 0.0 0.017 15.3 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12 Peptidase_M54 PF07998.11 gi|73670661|ref|YP_306676.1| - 0.039 13.9 0.0 0.058 13.4 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M54 Reprolysin_3 PF13582.6 gi|73670661|ref|YP_306676.1| - 0.055 14.0 0.0 0.079 13.5 0.0 1.4 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like DUF4953 PF16313.5 gi|73670661|ref|YP_306676.1| - 0.11 11.7 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 Met-zincin Metallopep PF12044.8 gi|73670661|ref|YP_306676.1| - 0.16 10.5 0.0 0.23 10.0 0.0 1.1 1 0 0 1 1 1 0 Putative peptidase family PEMT PF04191.13 gi|73670662|ref|YP_306677.1| - 1.6e-15 57.4 1.8 1.6e-15 57.4 1.8 1.9 2 0 0 2 2 2 1 Phospholipid methyltransferase ICMT PF04140.14 gi|73670662|ref|YP_306677.1| - 6.7e-08 32.9 0.4 6.7e-08 32.9 0.4 1.9 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.17 gi|73670662|ref|YP_306677.1| - 2e-05 23.5 0.1 2e-05 23.5 0.1 2.0 1 1 1 2 2 2 1 Ergosterol biosynthesis ERG4/ERG24 family TMCCDC2 PF15844.5 gi|73670662|ref|YP_306677.1| - 0.022 14.7 0.5 0.039 13.9 0.5 1.4 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 NnrU PF07298.11 gi|73670662|ref|YP_306677.1| - 0.17 11.3 15.4 0.031 13.8 5.8 2.1 1 1 1 2 2 2 0 NnrU protein OrfB_IS605 PF01385.19 gi|73670664|ref|YP_306679.1| - 1.2e-27 96.5 1.3 2.6e-27 95.5 1.3 1.5 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73670664|ref|YP_306679.1| - 4.8e-22 77.7 0.2 1.1e-21 76.5 0.2 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73670664|ref|YP_306679.1| - 2.1e-19 68.7 3.3 4.3e-19 67.7 3.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73670664|ref|YP_306679.1| - 0.011 15.8 0.5 0.027 14.6 0.5 1.6 1 0 0 1 1 1 0 Piccolo Zn-finger zf-RanBP PF00641.18 gi|73670664|ref|YP_306679.1| - 9.1 5.7 9.0 9.5 5.6 0.6 2.8 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others Usp PF00582.26 gi|73670665|ref|YP_306680.1| - 2.1e-26 93.1 0.1 2.3e-26 93.0 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family FMN_dh PF01070.18 gi|73670665|ref|YP_306680.1| - 0.096 11.7 0.1 0.15 11.1 0.1 1.3 1 1 0 1 1 1 0 FMN-dependent dehydrogenase AvrPtoB-E3_ubiq PF09046.10 gi|73670665|ref|YP_306680.1| - 0.14 12.4 0.0 0.15 12.3 0.0 1.3 1 1 0 1 1 1 0 AvrPtoB E3 ubiquitin ligase PspA_IM30 PF04012.12 gi|73670667|ref|YP_306682.1| - 2.6e-26 92.6 31.3 3e-26 92.4 31.3 1.0 1 0 0 1 1 1 1 PspA/IM30 family NOG1 PF06858.14 gi|73670667|ref|YP_306682.1| - 0.0036 17.0 0.0 0.018 14.8 0.0 2.3 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) Osmo_CC PF08946.10 gi|73670667|ref|YP_306682.1| - 0.0098 16.1 1.5 0.0098 16.1 1.5 4.1 4 2 0 4 4 4 1 Osmosensory transporter coiled coil GPS2_interact PF15784.5 gi|73670667|ref|YP_306682.1| - 0.035 14.5 4.1 0.035 14.5 4.1 3.8 2 2 1 3 3 3 0 G-protein pathway suppressor 2-interacting domain DUF1910 PF08928.10 gi|73670667|ref|YP_306682.1| - 0.04 13.9 0.3 0.04 13.9 0.3 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1910) Flagellin_C PF00700.21 gi|73670667|ref|YP_306682.1| - 0.05 14.0 11.5 0.24 11.8 0.1 3.6 4 0 0 4 4 3 0 Bacterial flagellin C-terminal helical region DUF1664 PF07889.12 gi|73670667|ref|YP_306682.1| - 0.26 11.4 16.8 2.3 8.3 4.0 3.3 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) Sec34 PF04136.15 gi|73670667|ref|YP_306682.1| - 0.7 9.8 10.4 5.4 6.9 0.6 3.3 2 1 1 3 3 3 0 Sec34-like family DUF2089 PF09862.9 gi|73670667|ref|YP_306682.1| - 0.93 9.5 5.7 0.24 11.4 0.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2089) NYD-SP28_assoc PF14775.6 gi|73670667|ref|YP_306682.1| - 1.5 8.9 6.8 5.4 7.2 0.7 2.9 2 0 0 2 2 2 0 Sperm tail C-terminal domain YabA PF06156.13 gi|73670667|ref|YP_306682.1| - 1.6 9.4 18.3 1.2 9.8 2.6 3.4 1 1 2 3 3 3 0 Initiation control protein YabA Baculo_PEP_C PF04513.12 gi|73670667|ref|YP_306682.1| - 1.7 8.7 8.7 3.3 7.7 1.1 3.0 1 1 3 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus APG6_N PF17675.1 gi|73670667|ref|YP_306682.1| - 2 8.9 34.6 0.18 12.4 18.0 3.8 1 1 1 2 2 1 0 Apg6 coiled-coil region DUF724 PF05266.14 gi|73670667|ref|YP_306682.1| - 2.8 7.7 24.8 0.87 9.4 2.9 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF724) DUF3584 PF12128.8 gi|73670667|ref|YP_306682.1| - 4.2 4.8 29.0 0.044 11.3 15.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) GCN5L1 PF06320.13 gi|73670667|ref|YP_306682.1| - 5.2 7.2 19.4 0.99 9.6 1.8 3.3 2 2 1 3 3 3 0 GCN5-like protein 1 (GCN5L1) YlqD PF11068.8 gi|73670667|ref|YP_306682.1| - 5.4 7.4 22.2 0.62 10.4 8.0 3.4 1 1 2 3 3 3 0 YlqD protein CENP-F_leu_zip PF10473.9 gi|73670667|ref|YP_306682.1| - 5.8 6.9 29.1 9.6 6.2 16.0 3.5 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4239 PF14023.6 gi|73670667|ref|YP_306682.1| - 8.5 6.0 6.7 6.8 6.3 4.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4239) Exonuc_VII_L PF02601.15 gi|73670667|ref|YP_306682.1| - 9.6 5.7 18.9 69 2.9 18.9 1.9 1 1 0 1 1 1 0 Exonuclease VII, large subunit V4R PF02830.18 gi|73670668|ref|YP_306683.1| - 5.4e-18 64.8 0.1 8.8e-18 64.1 0.1 1.4 1 0 0 1 1 1 1 V4R domain HTH_5 PF01022.20 gi|73670668|ref|YP_306683.1| - 1.2e-11 44.3 0.1 2e-11 43.6 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|73670668|ref|YP_306683.1| - 1.8e-05 24.5 0.0 3e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|73670668|ref|YP_306683.1| - 2.7e-05 24.2 0.0 5.1e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MetOD1 PF18546.1 gi|73670668|ref|YP_306683.1| - 0.0023 17.9 0.0 0.0037 17.3 0.0 1.3 1 0 0 1 1 1 1 Metanogen output domain 1 HTH_IclR PF09339.10 gi|73670668|ref|YP_306683.1| - 0.0046 16.7 0.0 0.0076 16.0 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|73670668|ref|YP_306683.1| - 0.0049 17.3 0.0 0.0093 16.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|73670668|ref|YP_306683.1| - 0.0082 15.7 0.1 0.019 14.6 0.1 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|73670668|ref|YP_306683.1| - 0.065 13.1 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DprA_WH PF17782.1 gi|73670668|ref|YP_306683.1| - 0.08 13.1 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 DprA winged helix domain DUF2110 PF09883.9 gi|73670669|ref|YP_306684.1| - 2.8e-88 295.2 0.0 3.3e-88 295.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2110) GldM_N PF12081.8 gi|73670670|ref|YP_306685.1| - 0.004 17.3 2.5 0.004 17.3 2.5 1.8 1 1 1 2 2 2 1 GldM N-terminal domain MarR PF01047.22 gi|73670670|ref|YP_306685.1| - 0.0068 16.3 0.0 0.016 15.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|73670670|ref|YP_306685.1| - 0.021 15.3 0.0 0.049 14.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2250 PF10007.9 gi|73670670|ref|YP_306685.1| - 0.033 14.3 0.0 0.088 12.9 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) RE_MjaI PF09568.10 gi|73670670|ref|YP_306685.1| - 0.041 13.7 0.6 0.1 12.4 0.3 1.6 1 1 0 1 1 1 0 MjaI restriction endonuclease DUF724 PF05266.14 gi|73670670|ref|YP_306685.1| - 0.054 13.3 6.5 0.086 12.7 5.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF724) RPW8 PF05659.11 gi|73670670|ref|YP_306685.1| - 0.058 13.1 1.5 0.29 10.8 0.1 2.4 2 1 1 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MarR_2 PF12802.7 gi|73670670|ref|YP_306685.1| - 0.085 12.8 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 MarR family TetR_C_24 PF17932.1 gi|73670670|ref|YP_306685.1| - 0.089 13.1 0.0 0.24 11.7 0.0 1.7 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF1664 PF07889.12 gi|73670670|ref|YP_306685.1| - 0.1 12.7 0.6 0.23 11.5 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Sigma70_ner PF04546.13 gi|73670670|ref|YP_306685.1| - 0.13 12.1 12.9 0.32 10.9 13.0 1.6 1 1 0 1 1 1 0 Sigma-70, non-essential region HTH_Crp_2 PF13545.6 gi|73670670|ref|YP_306685.1| - 0.14 12.2 0.0 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain TssO PF17561.2 gi|73670670|ref|YP_306685.1| - 0.28 11.3 3.2 0.51 10.4 2.0 2.0 2 0 0 2 2 2 0 Type VI secretion system, TssO TMPIT PF07851.13 gi|73670670|ref|YP_306685.1| - 1.8 7.7 3.3 2.3 7.4 3.3 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF2203 PF09969.9 gi|73670670|ref|YP_306685.1| - 1.8 9.3 5.0 0.87 10.3 0.8 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 gi|73670670|ref|YP_306685.1| - 4.6 6.2 8.0 5 6.1 7.2 1.4 1 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlxA PF14282.6 gi|73670670|ref|YP_306685.1| - 4.6 7.3 9.5 15 5.6 2.5 2.5 1 1 1 2 2 2 0 FlxA-like protein TRM PF02005.16 gi|73670671|ref|YP_306686.1| - 1.7e-104 350.0 0.0 2e-104 349.8 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase DUF2067 PF09840.9 gi|73670671|ref|YP_306686.1| - 0.002 17.7 0.0 0.0033 17.0 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2067) HypA PF01155.19 gi|73670671|ref|YP_306686.1| - 0.077 13.0 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|73670671|ref|YP_306686.1| - 0.08 12.4 6.3 3.6 7.1 0.1 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Cons_hypoth95 PF03602.15 gi|73670671|ref|YP_306686.1| - 0.13 11.9 0.0 0.24 11.0 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 DNA_ligase_ZBD PF03119.16 gi|73670671|ref|YP_306686.1| - 4.2 7.5 9.1 2.6 8.1 0.5 2.9 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain Cupredoxin_1 PF13473.6 gi|73670672|ref|YP_306687.1| - 3.7e-05 23.8 0.1 0.00011 22.3 0.0 1.8 2 0 0 2 2 2 1 Cupredoxin-like domain Mucin PF01456.17 gi|73670672|ref|YP_306687.1| - 0.0044 17.0 0.1 0.0065 16.5 0.1 1.3 1 0 0 1 1 1 1 Mucin-like glycoprotein LPAM_1 PF08139.12 gi|73670673|ref|YP_306688.1| - 0.18 12.4 1.2 0.37 11.4 1.2 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF4010 PF13194.6 gi|73670674|ref|YP_306689.1| - 1.8e-48 165.1 16.4 1.8e-48 165.1 16.4 2.1 2 1 0 2 2 2 1 Domain of unknown function (DUF4010) MgtC PF02308.16 gi|73670674|ref|YP_306689.1| - 4.7e-19 68.9 6.4 4.7e-19 68.9 6.4 4.1 3 2 0 4 4 4 1 MgtC family Metallophos_2 PF12850.7 gi|73670675|ref|YP_306690.1| - 4.9e-22 78.9 0.0 7.4e-22 78.3 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|73670675|ref|YP_306690.1| - 1.2e-21 78.2 0.0 2.3e-21 77.2 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|73670675|ref|YP_306690.1| - 2e-12 47.0 0.3 3.8e-08 33.0 0.1 2.5 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily Amidohydro_1 PF01979.20 gi|73670675|ref|YP_306690.1| - 0.03 13.6 0.0 0.052 12.9 0.0 1.3 1 0 0 1 1 1 0 Amidohydrolase family B5 PF03484.15 gi|73670675|ref|YP_306690.1| - 0.068 13.5 0.0 0.18 12.1 0.0 1.8 1 1 1 2 2 2 0 tRNA synthetase B5 domain Methyltrn_RNA_2 PF04013.12 gi|73670676|ref|YP_306691.1| - 4e-64 216.0 0.0 4.5e-64 215.8 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase THUMP PF02926.17 gi|73670677|ref|YP_306692.1| - 2.8e-09 37.2 0.3 9.7e-09 35.5 0.0 2.0 2 0 0 2 2 2 1 THUMP domain Ribosomal_L21e PF01157.18 gi|73670678|ref|YP_306693.1| - 1.2e-34 118.2 0.6 1.3e-34 118.1 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.16 gi|73670679|ref|YP_306694.1| - 2.5e-10 40.8 2.1 4.9e-10 39.8 2.1 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb4 FumaraseC_C PF10415.9 gi|73670679|ref|YP_306694.1| - 0.14 12.6 2.7 1.3 9.5 0.0 2.9 3 0 0 3 3 3 0 Fumarase C C-terminus DUF3106 PF11304.8 gi|73670679|ref|YP_306694.1| - 0.15 12.5 0.3 3.2 8.3 0.3 2.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3106) DUF655 PF04919.12 gi|73670680|ref|YP_306695.1| - 8.5e-66 221.3 0.0 1e-65 221.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|73670680|ref|YP_306695.1| - 0.0019 18.4 0.0 0.0031 17.7 0.0 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|73670680|ref|YP_306695.1| - 0.011 16.0 0.0 0.022 15.0 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif RrnaAD PF00398.20 gi|73670681|ref|YP_306696.1| - 4.4e-59 199.7 0.1 5.4e-59 199.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|73670681|ref|YP_306696.1| - 6.9e-10 39.5 0.0 1.4e-09 38.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73670681|ref|YP_306696.1| - 6.1e-07 30.0 0.0 1.3e-06 29.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|73670681|ref|YP_306696.1| - 1.4e-05 24.9 0.0 2.5e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_31 PF13847.6 gi|73670681|ref|YP_306696.1| - 0.00013 21.8 0.0 0.0002 21.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73670681|ref|YP_306696.1| - 0.00017 21.5 0.0 0.00027 20.8 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|73670681|ref|YP_306696.1| - 0.00065 19.2 0.0 0.0011 18.4 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase NodS PF05401.11 gi|73670681|ref|YP_306696.1| - 0.0011 18.6 0.0 0.0016 18.1 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|73670681|ref|YP_306696.1| - 0.0026 17.3 0.0 0.0049 16.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|73670681|ref|YP_306696.1| - 0.0029 18.3 0.0 0.0091 16.7 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain DREV PF05219.12 gi|73670681|ref|YP_306696.1| - 0.0032 16.6 0.0 0.0057 15.8 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase CMAS PF02353.20 gi|73670681|ref|YP_306696.1| - 0.038 13.3 0.0 0.061 12.6 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase PCMT PF01135.19 gi|73670681|ref|YP_306696.1| - 0.041 13.6 0.0 0.064 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 gi|73670681|ref|YP_306696.1| - 0.055 13.1 0.0 0.081 12.6 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_32 PF13679.6 gi|73670681|ref|YP_306696.1| - 0.082 12.9 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DOT1 PF08123.13 gi|73670681|ref|YP_306696.1| - 0.13 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 MTS PF05175.14 gi|73670682|ref|YP_306697.1| - 1.8e-09 37.4 0.0 9e-07 28.6 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|73670682|ref|YP_306697.1| - 5.1e-05 23.1 0.0 9e-05 22.3 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73670682|ref|YP_306697.1| - 9.5e-05 22.3 0.0 0.00033 20.5 0.0 1.7 2 1 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 gi|73670682|ref|YP_306697.1| - 0.0005 19.9 0.0 0.00075 19.3 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|73670682|ref|YP_306697.1| - 0.00088 19.9 0.0 0.0066 17.1 0.0 2.3 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73670682|ref|YP_306697.1| - 0.0009 19.9 0.0 0.0095 16.7 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73670682|ref|YP_306697.1| - 0.0012 19.4 0.0 0.0092 16.6 0.0 2.2 2 1 0 2 2 1 1 Methyltransferase domain MetW PF07021.12 gi|73670682|ref|YP_306697.1| - 0.0016 18.1 0.0 0.0027 17.3 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|73670682|ref|YP_306697.1| - 0.0051 16.2 0.0 0.019 14.4 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_10 PF05971.12 gi|73670682|ref|YP_306697.1| - 0.0078 15.6 0.0 0.052 12.9 0.0 1.9 1 1 0 1 1 1 1 RNA methyltransferase FtsJ PF01728.19 gi|73670682|ref|YP_306697.1| - 0.011 15.8 0.0 0.013 15.7 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_24 PF13578.6 gi|73670682|ref|YP_306697.1| - 0.022 15.8 0.0 0.037 15.1 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain DUF1269 PF06897.12 gi|73670682|ref|YP_306697.1| - 0.054 13.8 0.0 0.2 12.0 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) Methyltransf_8 PF05148.15 gi|73670682|ref|YP_306697.1| - 0.054 13.3 0.1 0.088 12.6 0.1 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_18 PF12847.7 gi|73670682|ref|YP_306697.1| - 0.063 13.2 0.0 0.14 12.1 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase domain RrnaAD PF00398.20 gi|73670682|ref|YP_306697.1| - 0.11 11.5 0.0 0.15 11.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase CMAS PF02353.20 gi|73670682|ref|YP_306697.1| - 0.18 11.1 0.0 3 7.1 0.0 2.1 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase NAD_binding_1 PF00175.21 gi|73670683|ref|YP_306698.1| - 2.4e-21 76.4 0.0 3.4e-21 75.9 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|73670683|ref|YP_306698.1| - 9.6e-10 38.7 0.0 1.5e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain FAD_binding_8 PF08022.12 gi|73670683|ref|YP_306698.1| - 3.3e-07 30.4 0.1 1.8e-06 28.0 0.1 2.1 1 1 0 1 1 1 1 FAD-binding domain NAD_binding_6 PF08030.12 gi|73670683|ref|YP_306698.1| - 0.0001 22.5 0.5 0.0024 18.0 0.1 2.6 2 1 0 3 3 3 1 Ferric reductase NAD binding domain ThiP_synth PF10120.9 gi|73670684|ref|YP_306699.1| - 7.9e-45 152.4 0.1 9e-45 152.2 0.1 1.0 1 0 0 1 1 1 1 Thiamine-phosphate synthase Y1_Tnp PF01797.16 gi|73670685|ref|YP_306700.1| - 3.3e-15 56.3 2.1 3.6e-15 56.1 2.1 1.0 1 0 0 1 1 1 1 Transposase IS200 like Y1_Tnp PF01797.16 gi|73670686|ref|YP_306701.1| - 1.3e-08 35.0 0.3 1.6e-08 34.7 0.3 1.1 1 0 0 1 1 1 1 Transposase IS200 like OrfB_IS605 PF01385.19 gi|73670687|ref|YP_306702.1| - 1.3e-26 93.1 2.6 1.8e-26 92.7 1.7 1.6 2 0 0 2 2 2 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73670687|ref|YP_306702.1| - 2.5e-23 81.8 0.3 5.4e-23 80.7 0.3 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73670687|ref|YP_306702.1| - 1e-20 72.9 0.5 1.9e-20 72.0 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73670687|ref|YP_306702.1| - 0.00085 19.4 2.0 0.0011 19.1 0.6 1.8 2 0 0 2 2 2 1 Piccolo Zn-finger DUF244 PF03112.14 gi|73670687|ref|YP_306702.1| - 0.091 12.6 0.7 0.17 11.7 0.7 1.4 1 0 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF HypA PF01155.19 gi|73670687|ref|YP_306702.1| - 0.15 12.1 0.0 0.29 11.2 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|73670687|ref|YP_306702.1| - 0.16 12.0 0.5 0.3 11.2 0.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-RanBP PF00641.18 gi|73670687|ref|YP_306702.1| - 1.5 8.2 6.7 8.9 5.7 0.1 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Exo_endo_phos PF03372.23 gi|73670688|ref|YP_306703.1| - 2.9e-21 76.1 0.0 3.4e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|73670688|ref|YP_306703.1| - 0.00049 19.9 0.0 0.0029 17.5 0.0 2.0 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase MscL PF01741.18 gi|73670689|ref|YP_306704.1| - 2.1e-20 73.2 4.7 2.4e-20 73.1 4.7 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL Ac110_PIF PF07280.11 gi|73670689|ref|YP_306704.1| - 0.085 12.7 1.7 6.4 6.7 0.0 2.4 2 0 0 2 2 2 0 Per os infectivity factor AC110 ThrE PF06738.12 gi|73670689|ref|YP_306704.1| - 4.7 6.5 8.1 9.5 5.5 8.2 1.5 1 1 0 1 1 1 0 Putative threonine/serine exporter LysE PF01810.18 gi|73670690|ref|YP_306705.1| - 1e-18 67.5 4.3 1.2e-18 67.2 4.3 1.1 1 0 0 1 1 1 1 LysE type translocator DUF1689 PF07954.11 gi|73670690|ref|YP_306705.1| - 0.012 16.0 0.0 2.5 8.5 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1689) PTS_EIIA_1 PF00358.20 gi|73670690|ref|YP_306705.1| - 0.11 12.3 0.2 0.22 11.3 0.0 1.6 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABC2_membrane PF01061.24 gi|73670691|ref|YP_306706.1| - 8.9e-42 142.9 17.8 8.9e-42 142.9 17.8 1.4 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|73670691|ref|YP_306706.1| - 4.5e-16 58.9 27.2 4.5e-16 58.9 27.2 1.2 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|73670691|ref|YP_306706.1| - 4.6e-07 29.4 20.1 5.9e-07 29.0 19.3 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|73670692|ref|YP_306707.1| - 4.1e-35 121.3 0.0 9e-35 120.2 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|73670692|ref|YP_306707.1| - 6.8e-11 42.5 0.1 6.2e-05 23.0 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|73670692|ref|YP_306707.1| - 5.5e-07 29.6 0.6 0.0073 16.1 0.3 2.3 1 1 1 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|73670692|ref|YP_306707.1| - 7.2e-07 29.9 1.0 1.1e-06 29.4 1.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73670692|ref|YP_306707.1| - 3.8e-05 23.4 0.3 6.6e-05 22.6 0.3 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 gi|73670692|ref|YP_306707.1| - 0.0003 20.8 0.1 0.0006 19.8 0.0 1.5 2 0 0 2 2 2 1 Rad17 P-loop domain SMC_N PF02463.19 gi|73670692|ref|YP_306707.1| - 0.0011 18.5 0.0 0.0024 17.3 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|73670692|ref|YP_306707.1| - 0.0016 18.4 0.2 0.008 16.1 0.1 2.0 2 0 0 2 2 2 1 RsgA GTPase AAA PF00004.29 gi|73670692|ref|YP_306707.1| - 0.0033 17.9 0.2 0.02 15.3 0.1 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.6 gi|73670692|ref|YP_306707.1| - 0.031 12.9 0.0 3.1 6.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain DUF5442 PF17514.2 gi|73670692|ref|YP_306707.1| - 0.04 14.1 0.1 0.089 13.0 0.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5442) AAA_22 PF13401.6 gi|73670692|ref|YP_306707.1| - 0.048 13.9 0.2 0.14 12.5 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_10 PF12846.7 gi|73670692|ref|YP_306707.1| - 0.056 12.4 0.4 0.14 11.0 0.1 1.7 2 1 0 2 2 2 0 AAA-like domain NTPase_1 PF03266.15 gi|73670692|ref|YP_306707.1| - 0.058 13.3 0.1 0.16 11.8 0.1 1.7 1 1 0 1 1 1 0 NTPase gp45-slide_C PF09116.10 gi|73670692|ref|YP_306707.1| - 0.069 13.2 0.1 0.23 11.5 0.1 1.9 1 1 1 2 2 2 0 gp45 sliding clamp, C terminal SRP54 PF00448.22 gi|73670692|ref|YP_306707.1| - 0.077 12.6 0.2 0.15 11.7 0.2 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|73670692|ref|YP_306707.1| - 0.08 12.7 0.0 0.29 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|73670692|ref|YP_306707.1| - 0.1 12.2 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|73670692|ref|YP_306707.1| - 0.11 11.9 0.2 0.72 9.2 0.0 2.3 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI MukB PF04310.12 gi|73670692|ref|YP_306707.1| - 0.11 12.3 0.1 0.21 11.4 0.1 1.5 1 0 0 1 1 1 0 MukB N-terminal AAA_7 PF12775.7 gi|73670692|ref|YP_306707.1| - 0.17 11.4 0.2 0.38 10.2 0.1 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 gi|73670692|ref|YP_306707.1| - 0.22 11.6 1.6 3 8.0 0.3 2.4 2 1 0 2 2 2 0 50S ribosome-binding GTPase PAS_9 PF13426.7 gi|73670693|ref|YP_306708.1| - 1.4e-32 112.0 3.5 6e-17 61.8 0.0 4.0 4 0 0 4 4 4 3 PAS domain HisKA_2 PF07568.12 gi|73670693|ref|YP_306708.1| - 8.6e-30 102.7 1.4 8.6e-30 102.7 1.4 2.9 3 0 0 3 3 3 1 Histidine kinase PAS_3 PF08447.12 gi|73670693|ref|YP_306708.1| - 2.9e-27 94.8 0.1 1e-16 61.0 0.2 3.6 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.10 gi|73670693|ref|YP_306708.1| - 3.5e-27 94.8 0.0 3.8e-13 49.7 0.0 3.5 3 1 0 3 3 3 2 PAS fold PAS PF00989.25 gi|73670693|ref|YP_306708.1| - 1.8e-26 92.3 0.3 6.1e-16 58.4 0.0 3.8 3 1 0 3 3 3 3 PAS fold Response_reg PF00072.24 gi|73670693|ref|YP_306708.1| - 2.8e-16 59.7 0.0 1e-15 57.8 0.0 2.0 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 gi|73670693|ref|YP_306708.1| - 1.4e-07 32.0 0.9 7.1e-07 29.7 0.3 2.5 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|73670693|ref|YP_306708.1| - 8.4e-07 28.9 0.0 6.5e-06 26.1 0.0 2.5 2 0 0 2 2 2 1 PAS domain PAS_7 PF12860.7 gi|73670693|ref|YP_306708.1| - 0.0018 18.4 0.3 0.59 10.3 0.0 4.0 3 1 0 3 3 3 1 PAS fold PAS_10 PF13596.6 gi|73670693|ref|YP_306708.1| - 0.0056 17.3 0.0 6.6 7.4 0.0 3.1 2 0 0 2 2 2 1 PAS domain PAS_6 PF08348.11 gi|73670693|ref|YP_306708.1| - 0.0064 16.3 0.2 0.12 12.3 0.0 3.0 3 0 0 3 3 3 1 YheO-like PAS domain HWE_HK PF07536.14 gi|73670693|ref|YP_306708.1| - 0.026 15.2 0.1 0.072 13.8 0.1 1.8 1 0 0 1 1 1 0 HWE histidine kinase sCache_3_3 PF17202.4 gi|73670693|ref|YP_306708.1| - 0.085 13.3 0.0 0.62 10.5 0.0 2.4 2 0 0 2 2 2 0 Single cache domain 3 HATPase_c_2 PF13581.6 gi|73670693|ref|YP_306708.1| - 0.098 12.6 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Response_reg PF00072.24 gi|73670694|ref|YP_306709.1| - 5.6e-19 68.4 0.1 6.6e-19 68.1 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain CRM1_repeat_2 PF18784.1 gi|73670694|ref|YP_306709.1| - 0.11 12.2 0.1 0.22 11.2 0.1 1.5 1 0 0 1 1 1 0 CRM1 / Exportin repeat 2 HATPase_c PF02518.26 gi|73670695|ref|YP_306710.1| - 9.7e-21 74.4 0.0 1.2e-20 74.0 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|73670695|ref|YP_306710.1| - 0.018 15.0 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 GHKL domain HATPase_c_3 PF13589.6 gi|73670695|ref|YP_306710.1| - 0.061 13.1 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|73670696|ref|YP_306711.1| - 2.5e-60 201.5 0.0 1.5e-13 50.9 0.0 5.5 5 0 0 5 5 5 5 PAS fold PAS_9 PF13426.7 gi|73670696|ref|YP_306711.1| - 2.5e-51 172.3 1.4 4.2e-16 59.1 0.1 5.7 5 0 0 5 5 5 5 PAS domain PAS PF00989.25 gi|73670696|ref|YP_306711.1| - 1.5e-49 166.7 0.0 1.2e-14 54.3 0.0 6.2 5 1 0 5 5 5 5 PAS fold MEDS PF14417.6 gi|73670696|ref|YP_306711.1| - 9.3e-49 165.4 0.0 2.7e-48 163.8 0.0 1.9 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_3 PF08447.12 gi|73670696|ref|YP_306711.1| - 8.2e-45 151.0 0.6 6.8e-19 68.0 0.1 5.5 5 0 0 5 5 5 4 PAS fold PAS_8 PF13188.7 gi|73670696|ref|YP_306711.1| - 6.8e-30 102.6 0.0 1e-06 28.6 0.0 4.9 4 0 0 4 4 4 4 PAS domain HisKA PF00512.25 gi|73670696|ref|YP_306711.1| - 1.5e-12 47.4 1.6 1.3e-11 44.3 0.1 3.3 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS_11 PF14598.6 gi|73670696|ref|YP_306711.1| - 3.6e-06 27.1 0.0 1.1 9.5 0.0 4.4 5 0 0 5 5 5 2 PAS domain sCache_3_3 PF17202.4 gi|73670696|ref|YP_306711.1| - 0.0038 17.6 0.0 4.4 7.8 0.0 3.5 3 0 0 3 3 3 1 Single cache domain 3 HATPase_c PF02518.26 gi|73670696|ref|YP_306711.1| - 0.01 16.3 0.0 0.026 15.0 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FliH PF02108.16 gi|73670696|ref|YP_306711.1| - 0.077 13.1 0.3 3.4 7.8 0.0 2.7 2 0 0 2 2 2 0 Flagellar assembly protein FliH PAS_6 PF08348.11 gi|73670696|ref|YP_306711.1| - 0.12 12.3 0.1 27 4.6 0.0 3.4 4 0 0 4 4 4 0 YheO-like PAS domain His_kinase PF06580.13 gi|73670696|ref|YP_306711.1| - 0.14 12.5 5.0 1.5 9.2 0.5 3.8 4 0 0 4 4 4 0 Histidine kinase DUF5344 PF17279.2 gi|73670696|ref|YP_306711.1| - 0.66 10.6 4.8 0.31 11.7 0.4 2.8 3 0 0 3 3 2 0 Family of unknown function (DUF5344) DUF4164 PF13747.6 gi|73670696|ref|YP_306711.1| - 2 8.7 7.6 2.1 8.7 2.5 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) AdoHcyase PF05221.17 gi|73670697|ref|YP_306712.1| - 9.6e-56 189.1 0.0 2.2e-27 96.0 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|73670697|ref|YP_306712.1| - 1.8e-51 174.4 1.9 1.9e-51 174.3 0.5 1.7 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|73670697|ref|YP_306712.1| - 6.9e-10 38.6 0.1 1.3e-09 37.7 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|73670697|ref|YP_306712.1| - 1.1e-05 25.0 0.0 2.2e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 gi|73670697|ref|YP_306712.1| - 0.016 15.4 0.1 0.036 14.3 0.1 1.7 1 0 0 1 1 1 0 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|73670697|ref|YP_306712.1| - 0.051 12.9 0.2 0.084 12.2 0.2 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Amidohydro_1 PF01979.20 gi|73670698|ref|YP_306713.1| - 2e-76 257.5 1.1 2.4e-76 257.3 1.1 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|73670698|ref|YP_306713.1| - 1.6e-22 80.6 0.6 1.5e-16 61.0 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|73670698|ref|YP_306713.1| - 0.11 11.7 0.0 0.18 11.1 0.0 1.3 1 0 0 1 1 1 0 Adenosine/AMP deaminase HD PF01966.22 gi|73670699|ref|YP_306714.1| - 2.9e-15 56.6 1.2 4.6e-15 55.9 0.8 1.5 2 0 0 2 2 2 1 HD domain PPS_PS PF02006.16 gi|73670700|ref|YP_306715.1| - 6.4e-74 247.3 4.3 7.9e-74 247.0 4.3 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase Tho1_MOS11_C PF18592.1 gi|73670700|ref|YP_306715.1| - 0.042 13.7 0.0 0.096 12.5 0.0 1.5 1 0 0 1 1 1 0 Tho1/MOS11 C-terminal domain MIT_C PF16565.5 gi|73670700|ref|YP_306715.1| - 0.14 12.2 1.2 0.23 11.4 1.2 1.4 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT GHMP_kinases_N PF00288.26 gi|73670701|ref|YP_306716.1| - 3.2e-08 33.7 2.7 5.9e-08 32.8 2.7 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|73670701|ref|YP_306716.1| - 3.4e-06 27.3 0.2 6.6e-05 23.2 0.0 2.5 2 0 0 2 2 2 1 GHMP kinases C terminal DFP PF04127.15 gi|73670702|ref|YP_306717.1| - 3.1e-50 170.6 0.2 1.6e-48 165.0 0.0 2.1 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|73670702|ref|YP_306717.1| - 1e-36 126.1 0.2 1.7e-36 125.3 0.2 1.4 1 0 0 1 1 1 1 Flavoprotein NAD_binding_10 PF13460.6 gi|73670702|ref|YP_306717.1| - 0.0024 17.8 0.4 0.012 15.5 0.0 2.4 2 1 0 2 2 2 1 NAD(P)H-binding Usp PF00582.26 gi|73670702|ref|YP_306717.1| - 0.02 15.4 1.3 8.4 6.9 0.1 3.1 2 1 1 3 3 3 0 Universal stress protein family Glyco_transf_4 PF13439.6 gi|73670702|ref|YP_306717.1| - 0.028 14.4 0.0 0.58 10.1 0.0 2.7 3 1 0 3 3 3 0 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|73670702|ref|YP_306717.1| - 0.041 14.3 1.9 0.15 12.5 1.9 2.0 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain Pyr_redox_3 PF13738.6 gi|73670702|ref|YP_306717.1| - 0.13 11.5 0.2 2.8 7.1 0.0 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF5454 PF17535.2 gi|73670702|ref|YP_306717.1| - 0.24 10.8 0.0 0.36 10.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5454) acVLRF1 PF18859.1 gi|73670703|ref|YP_306718.1| - 1.2e-17 64.4 0.0 4.1e-17 62.7 0.0 1.9 2 0 0 2 2 2 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|73670703|ref|YP_306718.1| - 1.6e-11 44.7 0.0 3e-11 43.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_2 PF03464.15 gi|73670703|ref|YP_306718.1| - 6.4e-10 39.5 0.1 1.3e-09 38.4 0.1 1.5 1 0 0 1 1 1 1 eRF1 domain 2 baeRF_family2 PF18844.1 gi|73670703|ref|YP_306718.1| - 3.3e-06 27.2 0.2 7.8e-05 22.8 0.0 2.8 3 1 1 4 4 4 1 Bacterial archaeo-eukaryotic release factor family 2 DUF1275 PF06912.11 gi|73670704|ref|YP_306719.1| - 1.1e-51 175.6 11.5 1.2e-51 175.4 11.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) FtsK_4TM PF13491.6 gi|73670704|ref|YP_306719.1| - 0.0012 18.6 0.4 0.003 17.3 0.0 1.8 2 1 0 2 2 2 1 4TM region of DNA translocase FtsK/SpoIIIE RseC_MucC PF04246.12 gi|73670704|ref|YP_306719.1| - 0.023 14.6 1.3 0.023 14.6 1.3 2.4 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Bap31 PF05529.12 gi|73670704|ref|YP_306719.1| - 0.091 12.6 0.9 0.19 11.6 0.9 1.5 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region Methyltransf_31 PF13847.6 gi|73670705|ref|YP_306720.1| - 4.9e-25 88.1 0.1 5.7e-25 87.9 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73670705|ref|YP_306720.1| - 2.7e-21 76.0 0.0 4.5e-21 75.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670705|ref|YP_306720.1| - 2.9e-20 72.8 0.0 4.5e-20 72.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73670705|ref|YP_306720.1| - 5.6e-18 65.5 0.1 1e-17 64.7 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73670705|ref|YP_306720.1| - 1.1e-14 54.6 0.0 1.6e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73670705|ref|YP_306720.1| - 2.3e-11 43.5 0.1 3.8e-11 42.8 0.1 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family DREV PF05219.12 gi|73670705|ref|YP_306720.1| - 2.1e-06 27.1 0.1 3.4e-06 26.4 0.1 1.3 1 0 0 1 1 1 1 DREV methyltransferase MetW PF07021.12 gi|73670705|ref|YP_306720.1| - 6.5e-06 25.9 0.0 1.1e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|73670705|ref|YP_306720.1| - 6.2e-05 22.5 0.0 9.3e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 gi|73670705|ref|YP_306720.1| - 0.00014 21.4 0.0 0.025 14.0 0.0 2.3 2 0 0 2 2 2 1 Putative methyltransferase NodS PF05401.11 gi|73670705|ref|YP_306720.1| - 0.00016 21.4 0.0 0.00027 20.6 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_8 PF05148.15 gi|73670705|ref|YP_306720.1| - 0.00025 20.9 0.5 0.00067 19.6 0.5 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.14 gi|73670705|ref|YP_306720.1| - 0.00043 19.9 0.0 0.00078 19.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.18 gi|73670705|ref|YP_306720.1| - 0.001 18.4 0.2 0.0027 17.0 0.0 1.7 2 1 0 2 2 2 1 O-methyltransferase domain CMAS PF02353.20 gi|73670705|ref|YP_306720.1| - 0.0012 18.2 0.0 0.002 17.5 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase TehB PF03848.14 gi|73670705|ref|YP_306720.1| - 0.0048 16.3 0.1 0.0082 15.6 0.1 1.4 1 0 0 1 1 1 1 Tellurite resistance protein TehB DOT1 PF08123.13 gi|73670705|ref|YP_306720.1| - 0.015 14.8 0.1 0.024 14.1 0.1 1.5 1 1 0 1 1 1 0 Histone methylation protein DOT1 CheR PF01739.18 gi|73670705|ref|YP_306720.1| - 0.031 13.8 0.4 0.21 11.1 0.2 2.2 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain Methyltransf_29 PF03141.16 gi|73670705|ref|YP_306720.1| - 0.038 12.6 0.0 0.05 12.2 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Pox_MCEL PF03291.16 gi|73670705|ref|YP_306720.1| - 0.041 13.0 1.4 0.11 11.6 0.1 2.0 2 0 0 2 2 2 0 mRNA capping enzyme Methyltransf_32 PF13679.6 gi|73670705|ref|YP_306720.1| - 0.052 13.5 0.0 0.074 13.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DUF3419 PF11899.8 gi|73670705|ref|YP_306720.1| - 0.056 12.6 0.0 5.5 6.1 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3419) TFX_C PF14601.6 gi|73670705|ref|YP_306720.1| - 0.088 12.8 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term FtsJ PF01728.19 gi|73670705|ref|YP_306720.1| - 0.11 12.5 0.0 0.3 11.2 0.0 1.7 1 1 0 1 1 1 0 FtsJ-like methyltransferase FtsJ PF01728.19 gi|73670706|ref|YP_306721.1| - 1.2e-55 188.4 0.0 1.7e-55 187.9 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase TRAM PF01938.20 gi|73670706|ref|YP_306721.1| - 1.4e-09 37.8 1.3 2.6e-09 36.9 1.3 1.5 1 0 0 1 1 1 1 TRAM domain Methyltransf_23 PF13489.6 gi|73670706|ref|YP_306721.1| - 0.00011 22.0 0.0 0.00035 20.4 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73670706|ref|YP_306721.1| - 0.0024 17.7 0.0 0.036 13.9 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670706|ref|YP_306721.1| - 0.064 14.0 0.1 0.52 11.0 0.1 2.3 1 1 1 2 2 2 0 Methyltransferase domain PHP PF02811.19 gi|73670707|ref|YP_306722.1| - 7e-10 39.5 0.1 1.1e-09 38.8 0.1 1.6 1 1 0 1 1 1 1 PHP domain ATPgrasp_N PF18130.1 gi|73670707|ref|YP_306722.1| - 0.035 14.6 0.3 0.14 12.8 0.1 2.1 3 0 0 3 3 3 0 ATP-grasp N-terminal domain Big_3_5 PF16640.5 gi|73670709|ref|YP_306724.1| - 6e-21 74.4 3.0 6e-21 74.4 3.0 5.3 4 2 1 5 5 5 1 Bacterial Ig-like domain (group 3) Lactonase PF10282.9 gi|73670709|ref|YP_306724.1| - 2.8e-13 49.9 6.8 2.2e-06 27.2 0.4 4.1 1 1 3 4 4 4 3 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|73670709|ref|YP_306724.1| - 5.9e-06 26.1 6.5 0.063 12.8 0.0 3.7 1 1 2 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region Cytochrom_D1 PF02239.16 gi|73670709|ref|YP_306724.1| - 9e-05 21.2 3.0 0.0055 15.3 0.1 2.9 1 1 0 2 2 2 2 Cytochrome D1 heme domain NHL PF01436.21 gi|73670709|ref|YP_306724.1| - 9.4e-05 22.3 13.5 5.4 7.2 0.3 5.9 6 0 0 6 6 6 3 NHL repeat Arylesterase PF01731.20 gi|73670709|ref|YP_306724.1| - 0.00018 21.7 12.4 2.8 8.2 0.0 6.3 4 2 2 6 6 6 2 Arylesterase DUF5050 PF16472.5 gi|73670709|ref|YP_306724.1| - 0.019 14.2 2.1 0.038 13.2 2.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5050) Acyl-CoA_dh_M PF02770.19 gi|73670709|ref|YP_306724.1| - 0.029 14.6 5.8 19 5.6 0.0 3.6 2 1 1 3 3 3 0 Acyl-CoA dehydrogenase, middle domain SBP56 PF05694.11 gi|73670709|ref|YP_306724.1| - 0.094 11.5 0.0 17 4.1 0.0 3.5 2 1 0 3 3 3 0 56kDa selenium binding protein (SBP56) FlaG PF03646.15 gi|73670709|ref|YP_306724.1| - 1.1 9.5 0.0 1.1 9.5 0.0 4.6 6 0 0 6 6 6 0 FlaG protein Zfx_Zfy_act PF04704.13 gi|73670709|ref|YP_306724.1| - 6.8 5.7 7.7 0.63 9.1 0.2 2.7 2 2 1 3 3 3 0 Zfx / Zfy transcription activation region PPDK_N PF01326.19 gi|73670710|ref|YP_306725.1| - 4.3e-92 308.9 0.0 7.4e-92 308.1 0.0 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|73670710|ref|YP_306725.1| - 1.1e-23 82.8 0.1 4e-23 80.9 0.0 1.9 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain Na_H_Exchanger PF00999.21 gi|73670711|ref|YP_306726.1| - 3.5e-46 157.7 50.1 4.8e-46 157.3 50.1 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|73670711|ref|YP_306726.1| - 1e-25 90.2 1.3 1.9e-25 89.4 0.3 1.9 2 0 0 2 2 2 1 TrkA-N domain TrkA_C PF02080.21 gi|73670711|ref|YP_306726.1| - 8.7e-11 41.5 0.4 2.2e-10 40.2 0.1 1.9 2 0 0 2 2 2 1 TrkA-C domain ApbA PF02558.16 gi|73670711|ref|YP_306726.1| - 2.4e-05 24.0 0.2 4.4e-05 23.2 0.2 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 gi|73670711|ref|YP_306726.1| - 0.00013 22.3 0.2 0.00025 21.5 0.2 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding F420_oxidored PF03807.17 gi|73670711|ref|YP_306726.1| - 0.00075 20.0 0.2 0.002 18.7 0.2 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|73670711|ref|YP_306726.1| - 0.0088 16.2 0.1 0.019 15.1 0.1 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|73670711|ref|YP_306726.1| - 0.011 15.9 0.3 0.022 15.0 0.3 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox PF00070.27 gi|73670711|ref|YP_306726.1| - 0.012 16.2 0.4 0.027 15.0 0.4 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 gi|73670711|ref|YP_306726.1| - 0.013 14.9 0.1 0.023 14.1 0.1 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|73670711|ref|YP_306726.1| - 0.02 14.8 0.2 0.035 14.0 0.2 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|73670711|ref|YP_306726.1| - 0.025 14.2 0.1 0.046 13.3 0.1 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox_2 PF07992.14 gi|73670711|ref|YP_306726.1| - 0.035 13.3 0.2 0.056 12.7 0.2 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|73670711|ref|YP_306726.1| - 0.042 13.1 0.7 0.077 12.3 0.7 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 gi|73670711|ref|YP_306726.1| - 0.13 11.5 0.1 0.18 11.0 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain Nitroreductase PF00881.24 gi|73670712|ref|YP_306727.1| - 3e-36 125.1 0.8 8.1e-20 71.6 0.5 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|73670712|ref|YP_306727.1| - 1.7e-25 89.9 2.0 2.1e-12 47.1 0.0 3.0 1 1 2 3 3 3 3 Putative TM nitroreductase Cation_efflux PF01545.21 gi|73670713|ref|YP_306728.1| - 5.1e-37 127.6 9.8 6.5e-37 127.2 9.8 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|73670713|ref|YP_306728.1| - 0.0019 18.3 1.3 0.0029 17.7 1.3 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF3995 PF13160.6 gi|73670713|ref|YP_306728.1| - 0.0069 16.7 1.2 0.62 10.4 0.1 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF3995) PQQ_2 PF13360.6 gi|73670714|ref|YP_306729.1| - 0.0034 17.0 0.1 1.6 8.2 0.1 2.4 1 1 1 2 2 2 2 PQQ-like domain UDP-g_GGTase PF06427.11 gi|73670714|ref|YP_306729.1| - 0.14 12.3 0.2 0.66 10.1 0.0 2.1 2 0 0 2 2 2 0 UDP-glucose:Glycoprotein Glucosyltransferase N6_Mtase PF02384.16 gi|73670715|ref|YP_306730.1| - 4.9e-70 236.3 0.0 7.1e-70 235.7 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|73670715|ref|YP_306730.1| - 6.1e-14 52.8 0.0 5.1e-13 49.8 0.0 2.5 1 1 0 1 1 1 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|73670715|ref|YP_306730.1| - 0.0017 18.1 0.8 0.063 12.9 0.7 3.0 2 1 0 2 2 2 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|73670715|ref|YP_306730.1| - 0.057 13.0 0.1 0.46 10.0 0.0 2.3 2 1 1 3 3 3 0 Methyltransferase small domain DUF2357 PF09823.9 gi|73670715|ref|YP_306730.1| - 0.077 12.2 0.0 0.46 9.7 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF2357) McrBC PF10117.9 gi|73670716|ref|YP_306731.1| - 3e-84 282.9 4.7 3.6e-84 282.6 4.7 1.0 1 0 0 1 1 1 1 McrBC 5-methylcytosine restriction system component AAA_5 PF07728.14 gi|73670717|ref|YP_306732.1| - 1.6e-16 60.6 0.1 2.9e-15 56.5 0.1 2.5 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|73670717|ref|YP_306732.1| - 1.8e-07 31.6 0.2 8.6e-07 29.4 0.2 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|73670717|ref|YP_306732.1| - 0.0012 19.1 0.0 0.0039 17.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|73670717|ref|YP_306732.1| - 0.0012 19.2 0.0 0.0095 16.3 0.0 2.3 2 1 0 2 2 1 1 AAA domain IstB_IS21 PF01695.17 gi|73670717|ref|YP_306732.1| - 0.0019 18.0 0.0 0.0096 15.7 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_25 PF13481.6 gi|73670717|ref|YP_306732.1| - 0.0045 16.6 0.0 0.0083 15.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|73670717|ref|YP_306732.1| - 0.017 14.9 0.0 0.04 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|73670717|ref|YP_306732.1| - 0.041 14.3 0.0 0.23 11.9 0.0 2.3 2 0 0 2 2 2 0 RNA helicase PhoH PF02562.16 gi|73670717|ref|YP_306732.1| - 0.045 13.2 0.0 0.12 11.8 0.0 1.6 2 0 0 2 2 2 0 PhoH-like protein AAA_16 PF13191.6 gi|73670717|ref|YP_306732.1| - 0.079 13.3 0.0 0.36 11.2 0.0 2.2 2 1 0 2 2 2 0 AAA ATPase domain DUF2075 PF09848.9 gi|73670717|ref|YP_306732.1| - 0.097 11.9 0.0 0.19 11.0 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_11 PF13086.6 gi|73670717|ref|YP_306732.1| - 0.12 12.2 0.0 0.3 10.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain RuvB_N PF05496.12 gi|73670717|ref|YP_306732.1| - 0.12 12.1 0.0 1.5 8.6 0.0 2.5 3 0 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain Methylase_S PF01420.19 gi|73670718|ref|YP_306733.1| - 1.5e-27 96.8 1.6 1.3e-12 48.3 0.2 2.4 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain DUF501 PF04417.12 gi|73670718|ref|YP_306733.1| - 0.5 10.2 2.9 5.3 6.9 0.8 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF501) Occludin_ELL PF07303.13 gi|73670718|ref|YP_306733.1| - 1.3 9.7 5.2 6.5 7.5 3.1 2.3 2 0 0 2 2 2 0 Occludin homology domain BacA PF02673.18 gi|73670719|ref|YP_306734.1| - 0.0096 15.7 1.0 0.23 11.1 0.2 2.1 2 0 0 2 2 2 2 Bacitracin resistance protein BacA EcoEI_R_C PF08463.10 gi|73670720|ref|YP_306735.1| - 8.8e-49 165.9 6.1 1e-48 165.7 0.9 3.1 3 0 0 3 3 3 1 EcoEI R protein C-terminal ResIII PF04851.15 gi|73670720|ref|YP_306735.1| - 1.6e-43 148.7 0.0 4.5e-43 147.2 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 gi|73670720|ref|YP_306735.1| - 2.4e-20 73.2 0.1 2.4e-20 73.2 0.1 2.3 2 0 0 2 2 2 1 SWI2/SNF2 ATPase DEAD PF00270.29 gi|73670720|ref|YP_306735.1| - 7.2e-11 42.2 0.0 3.9e-10 39.8 0.0 2.3 1 1 0 1 1 1 1 DEAD/DEAH box helicase HSDR_N PF04313.14 gi|73670720|ref|YP_306735.1| - 3.4e-07 30.4 8.2 9.7e-07 28.9 0.1 4.0 3 2 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) Helicase_C PF00271.31 gi|73670720|ref|YP_306735.1| - 0.0002 21.7 0.0 0.00095 19.5 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DUF87 PF01935.17 gi|73670720|ref|YP_306735.1| - 7.3 6.6 8.7 1.3 9.0 0.0 3.4 3 1 0 3 3 3 0 Helicase HerA, central domain DHR10 PF18595.1 gi|73670721|ref|YP_306736.1| - 0.0053 16.8 4.7 0.0085 16.1 4.7 1.2 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain PDCD2_C PF04194.13 gi|73670721|ref|YP_306736.1| - 0.018 15.1 4.7 0.035 14.2 4.7 1.4 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain UPF0242 PF06785.11 gi|73670721|ref|YP_306736.1| - 0.061 13.4 2.0 0.11 12.6 2.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2184 PF09950.9 gi|73670721|ref|YP_306736.1| - 0.066 12.6 0.1 0.1 12.0 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2184) Tropomyosin_1 PF12718.7 gi|73670721|ref|YP_306736.1| - 0.37 11.0 9.4 0.56 10.4 9.4 1.3 1 0 0 1 1 1 0 Tropomyosin like DUF4337 PF14235.6 gi|73670721|ref|YP_306736.1| - 1.2 9.3 7.0 2.5 8.2 7.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) XhlA PF10779.9 gi|73670721|ref|YP_306736.1| - 3.3 8.0 6.2 2.7 8.3 0.3 2.4 1 1 1 2 2 2 0 Haemolysin XhlA EII-Sor PF03609.14 gi|73670722|ref|YP_306737.1| - 0.11 11.9 0.2 0.13 11.7 0.2 1.1 1 0 0 1 1 1 0 PTS system sorbose-specific iic component KdpD PF02702.17 gi|73670723|ref|YP_306738.1| - 0.031 13.8 0.1 0.034 13.6 0.1 1.2 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain 60KD_IMP PF02096.20 gi|73670723|ref|YP_306738.1| - 0.4 10.6 2.3 0.55 10.1 2.3 1.2 1 0 0 1 1 1 0 60Kd inner membrane protein Aminotran_3 PF00202.21 gi|73670725|ref|YP_306740.1| - 1.5e-105 353.2 0.0 1.9e-105 352.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_5 PF00266.19 gi|73670725|ref|YP_306740.1| - 0.00034 19.7 0.0 0.00051 19.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|73670725|ref|YP_306740.1| - 0.00047 19.4 0.0 0.00064 19.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_helix PF13229.6 gi|73670725|ref|YP_306740.1| - 0.089 12.6 0.6 0.67 9.8 0.5 2.1 1 1 1 2 2 2 0 Right handed beta helix region Beta_elim_lyase PF01212.21 gi|73670725|ref|YP_306740.1| - 0.09 12.0 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase DUF4277 PF14104.6 gi|73670726|ref|YP_306741.1| - 2.1e-27 95.6 0.1 3.9e-27 94.8 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|73670726|ref|YP_306741.1| - 1.8e-16 60.5 0.1 2.6e-16 59.9 0.1 1.2 1 0 0 1 1 1 1 Transposase DDE domain Plasmid_parti PF01672.16 gi|73670726|ref|YP_306741.1| - 0.02 15.5 4.3 0.15 12.7 0.4 2.6 2 0 0 2 2 2 0 Putative plasmid partition protein UBA_3 PF09288.10 gi|73670726|ref|YP_306741.1| - 0.058 13.2 0.2 8.7 6.2 0.0 2.6 2 0 0 2 2 2 0 Fungal ubiquitin-associated domain FlaC_arch PF05377.11 gi|73670727|ref|YP_306742.1| - 0.014 15.8 0.9 0.3 11.5 0.1 2.5 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) UxuA PF03786.13 gi|73670727|ref|YP_306742.1| - 0.042 12.7 0.4 0.1 11.4 0.2 1.6 1 1 1 2 2 2 0 D-mannonate dehydratase (UxuA) Acylphosphatase PF00708.18 gi|73670728|ref|YP_306743.1| - 4e-20 72.0 0.1 4.2e-20 71.9 0.1 1.0 1 0 0 1 1 1 1 Acylphosphatase Metalloenzyme PF01676.18 gi|73670729|ref|YP_306744.1| - 1.1e-09 38.1 0.0 2e-09 37.2 0.0 1.4 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|73670729|ref|YP_306744.1| - 5.7e-07 29.4 0.1 2.4e-06 27.4 0.1 1.9 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|73670729|ref|YP_306744.1| - 8.6e-07 28.6 0.0 1.5e-06 27.8 0.0 1.6 1 1 0 1 1 1 1 Sulfatase DUF2207 PF09972.9 gi|73670729|ref|YP_306744.1| - 0.12 11.1 0.3 0.24 10.1 0.3 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PKD PF00801.20 gi|73670730|ref|YP_306745.1| - 0.00029 20.6 0.0 0.00049 19.9 0.0 1.3 1 0 0 1 1 1 1 PKD domain DJ-1_PfpI PF01965.24 gi|73670731|ref|YP_306746.1| - 3.1e-28 98.7 0.0 4e-28 98.3 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family Monooxygenase_B PF04744.12 gi|73670731|ref|YP_306746.1| - 0.13 11.1 0.0 0.21 10.4 0.0 1.2 1 0 0 1 1 1 0 Monooxygenase subunit B protein Acetyltransf_1 PF00583.25 gi|73670732|ref|YP_306747.1| - 3.2e-22 79.0 0.0 3.9e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 gi|73670732|ref|YP_306747.1| - 6.7e-16 58.5 0.0 8.5e-16 58.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|73670732|ref|YP_306747.1| - 7e-15 55.2 0.0 1e-14 54.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73670732|ref|YP_306747.1| - 3.6e-13 49.6 0.0 5.3e-13 49.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73670732|ref|YP_306747.1| - 1.3e-06 28.3 0.0 2.2e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|73670732|ref|YP_306747.1| - 0.00097 19.3 0.0 0.0011 19.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73670732|ref|YP_306747.1| - 0.0026 17.8 0.0 0.0073 16.4 0.0 1.6 1 1 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_6 PF13480.7 gi|73670732|ref|YP_306747.1| - 0.0039 17.4 0.0 0.0069 16.6 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 gi|73670732|ref|YP_306747.1| - 0.022 14.7 0.0 0.038 14.0 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase PanZ PF12568.8 gi|73670732|ref|YP_306747.1| - 0.13 12.0 0.1 0.17 11.6 0.1 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Nitroreductase PF00881.24 gi|73670733|ref|YP_306748.1| - 8.6e-25 87.7 0.0 1.6e-24 86.9 0.0 1.5 1 0 0 1 1 1 1 Nitroreductase family Fer4 PF00037.27 gi|73670733|ref|YP_306748.1| - 1.2e-10 40.7 8.8 1.5e-06 27.8 2.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73670733|ref|YP_306748.1| - 6e-09 36.4 16.6 5.3e-08 33.3 7.4 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73670733|ref|YP_306748.1| - 1.7e-08 34.5 6.8 2.7e-08 33.9 6.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73670733|ref|YP_306748.1| - 1.1e-06 28.5 9.8 0.00012 22.0 1.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain TM1586_NiRdase PF14512.6 gi|73670733|ref|YP_306748.1| - 1.1e-06 28.4 0.0 0.039 13.5 0.0 2.3 2 0 0 2 2 2 2 Putative TM nitroreductase Fer4_16 PF13484.6 gi|73670733|ref|YP_306748.1| - 1.2e-06 29.3 3.1 0.024 15.6 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|73670733|ref|YP_306748.1| - 2.4e-06 27.6 8.6 7e-06 26.1 8.9 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73670733|ref|YP_306748.1| - 6.8e-06 26.5 8.9 6.6e-05 23.4 8.9 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73670733|ref|YP_306748.1| - 7.4e-06 25.8 9.6 0.00034 20.5 1.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73670733|ref|YP_306748.1| - 7.6e-05 22.8 10.3 0.00024 21.2 10.3 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73670733|ref|YP_306748.1| - 0.00031 21.1 11.5 0.0032 17.9 11.5 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73670733|ref|YP_306748.1| - 0.0013 19.5 1.8 0.0013 19.5 1.8 1.9 1 1 1 2 2 1 1 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|73670733|ref|YP_306748.1| - 0.0037 17.7 13.2 0.034 14.6 3.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|73670733|ref|YP_306748.1| - 0.016 16.1 8.5 0.66 10.9 2.1 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73670733|ref|YP_306748.1| - 0.017 16.0 16.8 0.07 14.1 4.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73670733|ref|YP_306748.1| - 0.03 14.9 1.9 0.03 14.9 1.9 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Phage_cap_E PF03864.15 gi|73670733|ref|YP_306748.1| - 0.17 11.0 0.0 0.24 10.5 0.0 1.1 1 0 0 1 1 1 0 Phage major capsid protein E Fer4_18 PF13746.6 gi|73670733|ref|YP_306748.1| - 1.7 8.8 10.0 2.6 8.2 2.2 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Hydrolase_4 PF12146.8 gi|73670734|ref|YP_306749.1| - 2e-08 33.8 0.0 0.0015 17.9 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|73670734|ref|YP_306749.1| - 3e-05 24.7 0.0 0.00016 22.3 0.0 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family FSH1 PF03959.13 gi|73670734|ref|YP_306749.1| - 0.0031 17.2 0.0 0.0047 16.6 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_1 PF00561.20 gi|73670734|ref|YP_306749.1| - 0.011 15.4 0.1 0.19 11.3 0.0 2.1 1 1 1 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_7 PF12715.7 gi|73670734|ref|YP_306749.1| - 0.08 12.2 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 Abhydrolase family LCM PF04072.14 gi|73670735|ref|YP_306750.1| - 9.1e-52 175.7 0.0 1.2e-51 175.3 0.0 1.2 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase DDE_Tnp_1 PF01609.21 gi|73670736|ref|YP_306751.1| - 5.6e-22 78.4 0.9 7.5e-22 78.0 0.9 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73670736|ref|YP_306751.1| - 0.013 15.2 0.2 0.45 10.2 0.2 2.3 1 1 0 1 1 1 0 DDE superfamily endonuclease SAICAR_synt PF01259.18 gi|73670737|ref|YP_306752.1| - 3.5e-26 92.3 0.0 8.1e-13 48.6 0.0 2.1 2 0 0 2 2 2 2 SAICAR synthetase LCM PF04072.14 gi|73670739|ref|YP_306754.1| - 5.2e-50 170.0 0.0 6.2e-50 169.7 0.0 1.0 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase LCM PF04072.14 gi|73670740|ref|YP_306755.1| - 1.5e-54 184.8 0.0 2e-54 184.4 0.0 1.2 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase DUF2895 PF11444.8 gi|73670740|ref|YP_306755.1| - 0.18 11.2 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2895) LCM PF04072.14 gi|73670741|ref|YP_306756.1| - 2.7e-53 180.7 0.0 5.8e-53 179.6 0.0 1.5 2 0 0 2 2 2 1 Leucine carboxyl methyltransferase Pox_polyA_pol PF03296.13 gi|73670741|ref|YP_306756.1| - 0.024 14.5 0.0 0.046 13.6 0.0 1.4 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Corona_NS2A PF05213.12 gi|73670742|ref|YP_306757.1| - 0.013 14.9 0.0 0.017 14.5 0.0 1.3 1 1 0 1 1 1 0 Coronavirus NS2A protein TetR_N PF00440.23 gi|73670743|ref|YP_306758.1| - 8.6e-19 67.1 0.1 1.2e-18 66.6 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|73670743|ref|YP_306758.1| - 0.0008 19.6 0.0 0.00087 19.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase PUB PF09409.10 gi|73670743|ref|YP_306758.1| - 0.051 13.5 0.3 0.12 12.3 0.1 1.8 1 1 1 2 2 2 0 PUB domain FapA PF03961.13 gi|73670744|ref|YP_306759.1| - 0.027 13.1 13.5 0.089 11.4 13.1 1.7 1 1 1 2 2 2 0 Flagellar Assembly Protein A Nitroreductase PF00881.24 gi|73670745|ref|YP_306760.1| - 8.3e-30 104.1 0.2 1.2e-14 54.8 0.0 2.0 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|73670745|ref|YP_306760.1| - 1.3e-10 41.2 0.0 0.00083 19.0 0.0 3.1 2 1 1 3 3 3 3 Putative TM nitroreductase DUF2427 PF10348.9 gi|73670745|ref|YP_306760.1| - 0.081 12.7 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2427) ArsP_2 PF11449.8 gi|73670746|ref|YP_306761.1| - 4.5e-21 75.5 12.9 3.5e-12 46.2 0.4 2.0 1 1 0 2 2 2 2 Putative, 10TM heavy-metal exporter Methyltransf_25 PF13649.6 gi|73670747|ref|YP_306762.1| - 5.2e-17 62.3 0.0 8.8e-17 61.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73670747|ref|YP_306762.1| - 7.1e-15 55.6 0.1 1.2e-14 54.8 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73670747|ref|YP_306762.1| - 5.6e-14 52.6 0.0 8.1e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73670747|ref|YP_306762.1| - 1.1e-11 44.7 0.1 1.5e-11 44.3 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73670747|ref|YP_306762.1| - 1.3e-08 34.8 0.0 1.8e-08 34.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73670747|ref|YP_306762.1| - 2.4e-07 30.3 0.0 2.8e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family CMAS PF02353.20 gi|73670747|ref|YP_306762.1| - 3.2e-07 29.9 0.0 4.3e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|73670747|ref|YP_306762.1| - 3.7e-07 29.8 0.0 5.2e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.20 gi|73670747|ref|YP_306762.1| - 5.2e-05 22.4 0.1 0.00017 20.8 0.0 1.7 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase MetW PF07021.12 gi|73670747|ref|YP_306762.1| - 0.00035 20.2 0.1 0.00052 19.7 0.1 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_PK PF05891.12 gi|73670747|ref|YP_306762.1| - 0.0019 17.8 0.0 0.0023 17.5 0.0 1.1 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Spermine_synth PF01564.17 gi|73670747|ref|YP_306762.1| - 0.0023 17.4 0.3 0.0031 16.9 0.3 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain NodS PF05401.11 gi|73670747|ref|YP_306762.1| - 0.0024 17.5 0.0 0.0034 17.0 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_4 PF02390.17 gi|73670747|ref|YP_306762.1| - 0.013 14.9 0.0 0.022 14.2 0.0 1.3 1 1 0 1 1 1 0 Putative methyltransferase PrmA PF06325.13 gi|73670747|ref|YP_306762.1| - 0.017 14.6 0.0 0.024 14.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|73670747|ref|YP_306762.1| - 0.019 14.9 0.1 0.043 13.8 0.0 1.5 2 0 0 2 2 2 0 Methyltransferase domain N2227 PF07942.12 gi|73670747|ref|YP_306762.1| - 0.044 13.0 0.1 3 7.0 0.0 2.1 1 1 1 2 2 2 0 N2227-like protein Methyltransf_32 PF13679.6 gi|73670747|ref|YP_306762.1| - 0.062 13.3 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Isochorismatase PF00857.20 gi|73670748|ref|YP_306763.1| - 1e-40 139.8 0.0 1.1e-40 139.6 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family DDE_Tnp_1 PF01609.21 gi|73670749|ref|YP_306764.1| - 1.8e-21 76.8 0.6 2.4e-21 76.4 0.6 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|73670749|ref|YP_306764.1| - 0.011 15.4 0.2 0.37 10.5 0.2 2.3 1 1 0 1 1 1 0 DDE superfamily endonuclease FMN_red PF03358.15 gi|73670750|ref|YP_306765.1| - 7.3e-30 103.8 0.0 9.1e-30 103.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73670750|ref|YP_306765.1| - 1.5e-18 67.2 0.0 2e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Fer4_4 PF12800.7 gi|73670750|ref|YP_306765.1| - 0.0046 17.4 1.4 0.013 15.9 1.4 1.7 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4 PF00037.27 gi|73670750|ref|YP_306765.1| - 0.045 13.6 1.2 0.098 12.5 1.2 1.5 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73670750|ref|YP_306765.1| - 0.099 12.8 1.9 0.19 11.9 1.9 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|73670750|ref|YP_306765.1| - 0.34 11.1 3.8 0.68 10.2 3.8 1.5 1 0 0 1 1 1 0 4Fe-4S binding domain MFS_1 PF07690.16 gi|73670751|ref|YP_306766.1| - 1.7e-58 198.3 44.2 1.7e-58 198.3 44.2 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_3 PF05977.13 gi|73670751|ref|YP_306766.1| - 1.4e-09 37.0 12.9 9.2e-08 30.9 6.0 2.3 2 0 0 2 2 2 2 Transmembrane secretion effector Sugar_tr PF00083.24 gi|73670751|ref|YP_306766.1| - 9.1e-09 34.7 37.6 1.6e-07 30.5 18.8 2.6 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.6 gi|73670751|ref|YP_306766.1| - 1.7e-07 30.2 37.3 1.7e-07 30.2 14.2 2.7 2 1 1 3 3 3 2 MFS/sugar transport protein MFS_1_like PF12832.7 gi|73670751|ref|YP_306766.1| - 2.4e-06 26.7 29.2 0.00024 20.1 11.6 2.3 2 0 0 2 2 2 2 MFS_1 like family PUCC PF03209.15 gi|73670751|ref|YP_306766.1| - 0.00014 21.0 6.8 0.00014 21.0 6.8 2.4 2 1 0 2 2 2 2 PUCC protein DUF21 PF01595.20 gi|73670752|ref|YP_306767.1| - 1.8e-36 125.5 1.8 2.6e-36 125.0 1.8 1.1 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain Nitroreductase PF00881.24 gi|73670753|ref|YP_306768.1| - 8.5e-17 61.7 0.0 3.3e-08 33.8 0.0 3.2 3 0 0 3 3 3 2 Nitroreductase family DJ-1_PfpI PF01965.24 gi|73670754|ref|YP_306769.1| - 1e-38 132.8 0.4 1.1e-38 132.6 0.4 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 gi|73670754|ref|YP_306769.1| - 0.017 14.8 0.1 1.2 8.8 0.0 2.3 1 1 1 2 2 2 0 ThiJ/PfpI family-like Catalase_C PF18011.1 gi|73670754|ref|YP_306769.1| - 0.052 13.2 0.3 0.092 12.4 0.3 1.5 1 1 0 1 1 1 0 C-terminal domain found in long catalases GATase PF00117.28 gi|73670754|ref|YP_306769.1| - 0.095 12.5 0.0 0.16 11.7 0.0 1.7 1 1 0 1 1 1 0 Glutamine amidotransferase class-I DUF92 PF01940.16 gi|73670755|ref|YP_306770.1| - 1.1e-52 178.8 15.6 1.1e-52 178.8 15.6 2.9 2 2 0 2 2 2 1 Integral membrane protein DUF92 DUF4175 PF13779.6 gi|73670755|ref|YP_306770.1| - 0.43 8.4 2.9 0.67 7.8 2.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) DUF3450 PF11932.8 gi|73670756|ref|YP_306771.1| - 0.00036 19.9 9.1 0.00049 19.5 2.1 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) Serinc PF03348.15 gi|73670756|ref|YP_306771.1| - 0.015 14.2 2.0 0.016 14.2 2.0 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) Phage_min_cap2 PF06152.11 gi|73670756|ref|YP_306771.1| - 0.016 14.1 8.8 0.019 13.9 8.8 1.2 1 0 0 1 1 1 0 Phage minor capsid protein 2 FapA PF03961.13 gi|73670756|ref|YP_306771.1| - 0.019 13.6 2.1 0.021 13.5 2.1 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A CSG2 PF16965.5 gi|73670756|ref|YP_306771.1| - 0.039 12.9 2.4 0.046 12.7 2.4 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator FtsL PF04999.13 gi|73670756|ref|YP_306771.1| - 0.051 13.6 3.7 0.11 12.5 3.7 1.6 1 1 0 1 1 1 0 Cell division protein FtsL DUF4044 PF13253.6 gi|73670756|ref|YP_306771.1| - 0.11 12.0 0.9 0.2 11.2 0.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) RR_TM4-6 PF06459.12 gi|73670756|ref|YP_306771.1| - 0.14 11.9 9.2 0.17 11.7 9.2 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 O-antigen_lig PF13425.6 gi|73670756|ref|YP_306771.1| - 0.17 10.6 4.5 0.2 10.4 4.5 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein GRP PF07172.11 gi|73670756|ref|YP_306771.1| - 0.26 12.0 2.0 0.87 10.3 2.0 1.9 1 1 0 1 1 1 0 Glycine rich protein family CLN3 PF02487.17 gi|73670756|ref|YP_306771.1| - 0.36 9.8 1.9 0.46 9.5 1.9 1.1 1 0 0 1 1 1 0 CLN3 protein DUF4834 PF16118.5 gi|73670756|ref|YP_306771.1| - 0.55 11.2 6.7 1 10.4 6.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) Prefoldin_2 PF01920.20 gi|73670756|ref|YP_306771.1| - 1.7 8.6 6.7 1.3 9.0 0.6 2.1 1 1 1 2 2 2 0 Prefoldin subunit AAA_11 PF13086.6 gi|73670756|ref|YP_306771.1| - 1.9 8.2 4.8 2.2 8.0 4.8 1.1 1 0 0 1 1 1 0 AAA domain CRT10 PF08728.10 gi|73670756|ref|YP_306771.1| - 4.4 5.4 10.6 4.8 5.2 10.6 1.0 1 0 0 1 1 1 0 CRT10 EIIBC-GUT_N PF03612.14 gi|73670756|ref|YP_306771.1| - 5.3 6.7 7.8 9.8 5.9 7.8 1.6 1 1 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Jnk-SapK_ap_N PF09744.9 gi|73670756|ref|YP_306771.1| - 5.9 7.1 9.3 9.6 6.4 9.3 1.3 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 HTH_20 PF12840.7 gi|73670757|ref|YP_306772.1| - 1.4e-13 50.7 0.0 1.7e-13 50.4 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|73670757|ref|YP_306772.1| - 0.00032 20.5 1.5 0.00037 20.3 0.2 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|73670757|ref|YP_306772.1| - 0.0007 19.1 0.5 0.0015 18.0 0.5 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|73670757|ref|YP_306772.1| - 0.00094 19.0 0.1 0.0016 18.3 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|73670757|ref|YP_306772.1| - 0.0059 16.5 0.1 0.008 16.1 0.1 1.2 1 0 0 1 1 1 1 MarR family Methyltr_RsmF_N PF17125.5 gi|73670757|ref|YP_306772.1| - 0.01 16.3 0.0 0.013 16.0 0.0 1.3 1 0 0 1 1 1 0 N-terminal domain of 16S rRNA methyltransferase RsmF TFIIE_alpha PF02002.17 gi|73670757|ref|YP_306772.1| - 0.015 15.1 0.2 0.019 14.8 0.2 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit MarR PF01047.22 gi|73670757|ref|YP_306772.1| - 0.021 14.8 0.1 0.034 14.1 0.1 1.3 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 gi|73670757|ref|YP_306772.1| - 0.024 14.6 0.1 0.046 13.7 0.1 1.5 1 0 0 1 1 1 0 HTH domain DUF742 PF05331.11 gi|73670757|ref|YP_306772.1| - 0.086 12.7 0.0 0.13 12.1 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF742) Fib_alpha PF08702.10 gi|73670758|ref|YP_306773.1| - 0.026 14.7 1.3 0.041 14.1 1.3 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4369 PF14289.6 gi|73670758|ref|YP_306773.1| - 0.026 15.0 0.2 0.085 13.4 0.2 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4369) CarboxypepD_reg PF13620.6 gi|73670759|ref|YP_306774.1| - 3.3e-05 24.1 0.1 7.7e-05 22.9 0.1 1.6 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain MarR PF01047.22 gi|73670759|ref|YP_306774.1| - 0.001 19.0 0.1 0.0024 17.8 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|73670759|ref|YP_306774.1| - 0.0016 18.0 0.2 0.004 16.7 0.2 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|73670759|ref|YP_306774.1| - 0.0059 16.5 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|73670759|ref|YP_306774.1| - 0.016 15.7 0.4 0.038 14.5 0.1 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|73670759|ref|YP_306774.1| - 0.041 13.9 0.3 0.1 12.6 0.3 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_34 PF13601.6 gi|73670759|ref|YP_306774.1| - 0.081 13.1 1.0 8.5 6.6 0.0 2.8 3 0 0 3 3 3 0 Winged helix DNA-binding domain CarbopepD_reg_2 PF13715.6 gi|73670759|ref|YP_306774.1| - 0.098 12.7 1.6 0.21 11.6 0.0 2.3 2 0 0 2 2 2 0 CarboxypepD_reg-like domain TMP-TENI PF02581.17 gi|73670762|ref|YP_306777.1| - 1.5e-62 210.2 0.4 1.7e-62 210.0 0.4 1.0 1 0 0 1 1 1 1 Thiamine monophosphate synthase NMO PF03060.15 gi|73670762|ref|YP_306777.1| - 0.0013 18.2 0.9 0.0026 17.2 0.9 1.4 1 1 0 1 1 1 1 Nitronate monooxygenase Ribul_P_3_epim PF00834.19 gi|73670762|ref|YP_306777.1| - 0.0036 16.7 0.2 0.0068 15.8 0.2 1.4 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family HK PF02110.15 gi|73670763|ref|YP_306778.1| - 6.4e-78 261.5 1.8 7.2e-78 261.4 1.8 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|73670763|ref|YP_306778.1| - 8.5e-07 28.6 0.2 1.1e-06 28.2 0.2 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 gi|73670763|ref|YP_306778.1| - 1e-06 28.5 0.2 1.3e-06 28.1 0.2 1.1 1 0 0 1 1 1 1 Carbohydrate kinase Response_reg PF00072.24 gi|73670764|ref|YP_306779.1| - 1.5e-13 50.9 0.9 2e-13 50.5 0.9 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Oxidored_FMN PF00724.20 gi|73670765|ref|YP_306780.1| - 6.4e-45 153.9 0.1 1.6e-29 103.3 0.0 2.1 1 1 1 2 2 2 2 NADH:flavin oxidoreductase / NADH oxidase family Dus PF01207.17 gi|73670765|ref|YP_306780.1| - 3.6e-07 29.6 0.0 1.4e-06 27.7 0.0 1.9 2 1 0 2 2 2 1 Dihydrouridine synthase (Dus) RecR PF02132.15 gi|73670765|ref|YP_306780.1| - 0.084 12.5 0.3 0.31 10.6 0.3 1.9 1 0 0 1 1 1 0 RecR protein His_biosynth PF00977.21 gi|73670765|ref|YP_306780.1| - 0.12 11.8 0.0 11 5.4 0.0 2.3 2 0 0 2 2 2 0 Histidine biosynthesis protein Kelch_4 PF13418.6 gi|73670767|ref|YP_306782.1| - 1.5e-05 24.9 0.6 0.005 16.8 0.0 4.3 6 0 0 6 6 6 1 Galactose oxidase, central domain Kelch_3 PF13415.6 gi|73670767|ref|YP_306782.1| - 0.00029 21.1 2.1 4.6 7.7 0.2 4.1 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_6 PF13964.6 gi|73670767|ref|YP_306782.1| - 0.038 14.3 3.1 2.3 8.6 0.1 4.2 2 2 3 5 5 5 0 Kelch motif Pilin PF00114.19 gi|73670767|ref|YP_306782.1| - 0.67 10.9 3.6 47 5.0 0.3 3.3 1 1 1 2 2 2 0 Pilin (bacterial filament) PQQ PF01011.21 gi|73670767|ref|YP_306782.1| - 1.5 8.9 6.9 9.5 6.4 0.0 4.0 4 0 0 4 4 4 0 PQQ enzyme repeat Kelch_5 PF13854.6 gi|73670767|ref|YP_306782.1| - 5 7.2 6.5 3.3 7.8 0.8 3.5 3 0 0 3 3 3 0 Kelch motif PKD PF00801.20 gi|73670768|ref|YP_306783.1| - 6.7e-28 96.3 23.1 3.3e-11 42.9 5.6 3.5 3 0 0 3 3 3 3 PKD domain DUF2606 PF10794.9 gi|73670768|ref|YP_306783.1| - 0.011 15.5 1.4 24 4.7 0.0 4.3 3 1 0 3 3 3 0 Protein of unknown function (DUF2606) PKD_3 PF16820.5 gi|73670768|ref|YP_306783.1| - 0.026 14.3 2.9 2.2 8.1 0.1 3.0 3 0 0 3 3 3 0 PKD-like domain Tox-PL-2 PF15643.6 gi|73670768|ref|YP_306783.1| - 3.6 7.7 7.0 19 5.5 0.0 5.1 6 1 0 7 7 7 0 Papain fold toxin 2 PKD PF00801.20 gi|73670769|ref|YP_306784.1| - 5.1e-11 42.3 0.9 8.1e-11 41.6 0.9 1.4 1 0 0 1 1 1 1 PKD domain DUF5570 PF17731.1 gi|73670769|ref|YP_306784.1| - 0.17 12.0 0.1 0.2 11.8 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5570) Putative_PNPOx PF01243.20 gi|73670770|ref|YP_306785.1| - 6.9e-12 45.4 0.0 1.1e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|73670770|ref|YP_306785.1| - 6.5e-06 25.8 0.0 7.8e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Pyridox_ox_2 PF12900.7 gi|73670770|ref|YP_306785.1| - 4.1e-05 23.6 0.0 0.00011 22.2 0.0 1.7 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxase_2 PF12766.7 gi|73670770|ref|YP_306785.1| - 8.3e-05 23.1 0.0 0.00018 22.0 0.0 1.6 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase VWA_2 PF13519.6 gi|73670771|ref|YP_306786.1| - 3e-11 43.9 0.2 9.9e-11 42.2 0.2 1.9 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|73670771|ref|YP_306786.1| - 9.4e-08 32.5 0.1 4e-07 30.4 0.2 2.0 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|73670771|ref|YP_306786.1| - 3.9e-07 29.7 0.0 7e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_3 PF13768.6 gi|73670771|ref|YP_306786.1| - 0.00051 20.0 0.0 0.0019 18.1 0.0 1.9 2 0 0 2 2 2 1 von Willebrand factor type A domain Lzipper-MIP1 PF14389.6 gi|73670771|ref|YP_306786.1| - 0.0071 16.6 2.1 0.038 14.3 0.1 2.5 2 0 0 2 2 2 1 Leucine-zipper of ternary complex factor MIP1 AAA_5 PF07728.14 gi|73670772|ref|YP_306787.1| - 3.4e-26 91.9 0.0 8.3e-26 90.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_8 PF17868.1 gi|73670772|ref|YP_306787.1| - 9.8e-18 63.8 0.6 3.5e-17 62.0 0.6 2.1 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 gi|73670772|ref|YP_306787.1| - 3.5e-06 27.5 0.0 1.7e-05 25.2 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 gi|73670772|ref|YP_306787.1| - 7.7e-05 22.6 0.0 0.00014 21.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 gi|73670772|ref|YP_306787.1| - 0.0018 18.1 0.0 0.0039 16.9 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_16 PF13191.6 gi|73670772|ref|YP_306787.1| - 0.003 18.0 2.4 0.033 14.6 0.0 3.3 3 3 0 3 3 3 1 AAA ATPase domain AAA_7 PF12775.7 gi|73670772|ref|YP_306787.1| - 0.0034 16.9 0.1 0.03 13.8 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region MCM PF00493.23 gi|73670772|ref|YP_306787.1| - 0.016 14.3 0.0 0.049 12.7 0.0 1.7 1 1 1 2 2 2 0 MCM P-loop domain Mg_chelatase PF01078.21 gi|73670772|ref|YP_306787.1| - 0.025 14.0 0.0 0.078 12.4 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 gi|73670772|ref|YP_306787.1| - 0.095 11.9 0.1 0.29 10.3 0.0 1.7 2 0 0 2 2 2 0 TIP49 P-loop domain DUF3135 PF11333.8 gi|73670772|ref|YP_306787.1| - 0.34 11.2 2.4 3.4 8.0 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3135) MarR PF01047.22 gi|73670773|ref|YP_306788.1| - 8e-13 48.1 0.0 1.7e-12 47.1 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|73670773|ref|YP_306788.1| - 2.8e-12 46.9 0.1 4.9e-12 46.2 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|73670773|ref|YP_306788.1| - 1.5e-10 40.8 0.1 4.3e-10 39.3 0.0 1.8 2 0 0 2 2 2 1 MarR family B-block_TFIIIC PF04182.12 gi|73670773|ref|YP_306788.1| - 0.00074 19.6 0.0 0.0014 18.7 0.0 1.7 1 1 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_IclR PF09339.10 gi|73670773|ref|YP_306788.1| - 0.0019 17.9 0.0 0.0044 16.8 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_34 PF13601.6 gi|73670773|ref|YP_306788.1| - 0.007 16.5 0.0 0.013 15.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HxlR PF01638.17 gi|73670773|ref|YP_306788.1| - 0.0085 15.9 0.0 0.015 15.1 0.0 1.6 1 1 0 1 1 1 1 HxlR-like helix-turn-helix TrmB PF01978.19 gi|73670773|ref|YP_306788.1| - 0.01 15.7 0.1 0.038 13.9 0.0 2.0 2 1 1 3 3 3 0 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 gi|73670773|ref|YP_306788.1| - 0.059 13.3 0.0 0.15 12.1 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain RP-C PF03428.13 gi|73670773|ref|YP_306788.1| - 0.071 12.8 0.1 0.25 11.0 0.0 1.8 2 0 0 2 2 2 0 Replication protein C N-terminal domain TrmB PF01978.19 gi|73670774|ref|YP_306789.1| - 8.8e-25 86.4 0.0 1.2e-24 86.0 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|73670774|ref|YP_306789.1| - 2.9e-07 30.2 0.0 1.1e-06 28.3 0.0 2.0 3 0 0 3 3 3 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|73670774|ref|YP_306789.1| - 2.7e-05 23.9 0.0 4.2e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|73670774|ref|YP_306789.1| - 0.00049 20.0 0.0 0.001 19.0 0.0 1.5 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|73670774|ref|YP_306789.1| - 0.001 19.4 0.1 0.0067 16.7 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulator PadR PF03551.14 gi|73670774|ref|YP_306789.1| - 0.016 15.2 0.0 4.1 7.4 0.0 2.2 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|73670774|ref|YP_306789.1| - 0.029 13.9 0.2 0.16 11.6 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|73670774|ref|YP_306789.1| - 0.08 12.9 0.0 0.14 12.2 0.0 1.6 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|73670774|ref|YP_306789.1| - 0.09 12.6 0.1 0.22 11.3 0.0 1.7 2 0 0 2 2 2 0 LexA DNA binding domain Fe_dep_repress PF01325.19 gi|73670774|ref|YP_306789.1| - 0.15 12.3 0.1 0.29 11.4 0.1 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HhH-GPD PF00730.25 gi|73670776|ref|YP_306791.1| - 3.9e-17 62.7 0.0 5.4e-17 62.2 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|73670776|ref|YP_306791.1| - 8.7e-07 28.5 0.0 2e-06 27.3 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|73670776|ref|YP_306791.1| - 0.0032 18.1 0.1 0.052 14.2 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|73670776|ref|YP_306791.1| - 0.14 12.3 0.0 0.32 11.1 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif PsiE PF06146.12 gi|73670777|ref|YP_306792.1| - 1.7e-10 41.1 3.8 1.7e-10 41.1 3.8 1.9 3 0 0 3 3 3 1 Phosphate-starvation-inducible E Phage_Coat_Gp8 PF05371.12 gi|73670777|ref|YP_306792.1| - 0.073 12.9 3.1 1.1 9.1 0.4 2.6 2 0 0 2 2 2 0 Phage major coat protein, Gp8 DUF3397 PF11877.8 gi|73670777|ref|YP_306792.1| - 0.21 11.8 11.9 0.19 11.9 2.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3397) Cortexin PF11057.8 gi|73670777|ref|YP_306792.1| - 1.3 8.9 4.9 16 5.4 0.0 2.6 3 0 0 3 3 3 0 Cortexin of kidney DUF5083 PF16890.5 gi|73670777|ref|YP_306792.1| - 1.8 8.3 7.8 2.2 8.0 7.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5083) OAD_gamma PF04277.13 gi|73670777|ref|YP_306792.1| - 2.8 8.6 9.7 19 6.0 0.0 3.3 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain MacB_PCD PF12704.7 gi|73670778|ref|YP_306793.1| - 8.5e-27 94.8 3.3 8.5e-27 94.8 3.3 3.2 3 1 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|73670778|ref|YP_306793.1| - 1.5e-15 57.4 7.8 1.5e-15 57.4 7.8 3.4 4 0 0 4 4 4 1 FtsX-like permease family Yip1 PF04893.17 gi|73670778|ref|YP_306793.1| - 0.45 10.2 14.1 1.6 8.4 10.5 2.4 2 0 0 2 2 2 0 Yip1 domain LptF_LptG PF03739.14 gi|73670778|ref|YP_306793.1| - 2.5 6.9 9.2 0.37 9.6 2.4 2.7 2 1 1 3 3 3 0 Lipopolysaccharide export system permease LptF/LptG NPCBM_assoc PF10633.9 gi|73670779|ref|YP_306794.1| - 2.1e-10 40.7 0.0 6.6e-05 23.1 0.1 3.7 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|73670779|ref|YP_306794.1| - 4.5e-07 30.1 4.3 0.079 13.2 0.5 3.9 2 1 2 4 4 4 3 CARDB DUF11 PF01345.18 gi|73670779|ref|YP_306794.1| - 6.8e-05 23.1 0.1 0.023 15.0 0.3 3.2 3 0 0 3 3 3 1 Domain of unknown function DUF11 DUF2393 PF09624.10 gi|73670779|ref|YP_306794.1| - 0.00068 19.7 3.5 0.12 12.3 0.0 4.1 3 1 1 4 4 4 1 Protein of unknown function (DUF2393) DUF4397 PF14344.6 gi|73670779|ref|YP_306794.1| - 0.0048 17.7 2.7 0.13 13.1 0.4 2.7 2 1 0 2 2 2 1 Domain of unknown function (DUF4397) Alpha_adaptinC2 PF02883.20 gi|73670779|ref|YP_306794.1| - 0.0072 16.6 0.0 0.69 10.2 0.0 3.0 3 0 0 3 3 3 1 Adaptin C-terminal domain ABC_tran PF00005.27 gi|73670780|ref|YP_306795.1| - 1.5e-33 116.2 0.1 3e-33 115.2 0.0 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|73670780|ref|YP_306795.1| - 3.7e-05 23.3 0.3 0.039 13.4 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|73670780|ref|YP_306795.1| - 4e-05 24.1 0.0 8.8e-05 22.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|73670780|ref|YP_306795.1| - 0.00026 20.7 0.0 0.00054 19.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|73670780|ref|YP_306795.1| - 0.00045 20.0 0.0 0.0079 15.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|73670780|ref|YP_306795.1| - 0.0017 18.3 0.1 0.0032 17.4 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|73670780|ref|YP_306795.1| - 0.0069 16.7 0.4 0.051 13.8 0.1 2.1 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 gi|73670780|ref|YP_306795.1| - 0.0096 15.8 0.3 1.1 9.0 0.2 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|73670780|ref|YP_306795.1| - 0.014 15.9 0.1 0.05 14.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|73670780|ref|YP_306795.1| - 0.039 13.7 0.0 0.4 10.4 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein MMR_HSR1 PF01926.23 gi|73670780|ref|YP_306795.1| - 0.076 13.1 0.4 0.16 12.0 0.4 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase PhoH PF02562.16 gi|73670780|ref|YP_306795.1| - 0.086 12.3 0.2 0.74 9.2 0.0 2.1 1 1 0 2 2 2 0 PhoH-like protein AAA_25 PF13481.6 gi|73670780|ref|YP_306795.1| - 0.1 12.2 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|73670780|ref|YP_306795.1| - 0.16 12.3 0.1 0.45 10.9 0.1 1.7 1 0 0 1 1 1 0 RNA helicase DUF3194 PF11419.8 gi|73670781|ref|YP_306796.1| - 2.8 8.4 18.3 87 3.6 18.3 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3194) HTH_3 PF01381.22 gi|73670782|ref|YP_306797.1| - 4.9e-15 55.3 0.0 5.5e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|73670782|ref|YP_306797.1| - 4.9e-08 32.9 0.1 5.8e-08 32.6 0.1 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|73670782|ref|YP_306797.1| - 9.8e-07 29.0 0.0 1.1e-06 28.9 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|73670782|ref|YP_306797.1| - 4.3e-06 27.1 0.0 4.9e-06 26.9 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_Crp_2 PF13545.6 gi|73670782|ref|YP_306797.1| - 0.002 18.0 0.0 0.0036 17.2 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_25 PF13413.6 gi|73670782|ref|YP_306797.1| - 0.015 15.1 0.1 0.02 14.8 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_37 PF13744.6 gi|73670782|ref|YP_306797.1| - 0.069 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain MerR PF00376.23 gi|73670782|ref|YP_306797.1| - 0.1 12.4 0.0 0.19 11.5 0.0 1.5 1 1 0 1 1 1 0 MerR family regulatory protein DUF2298 PF10060.9 gi|73670783|ref|YP_306798.1| - 0.0025 16.6 1.6 0.0046 15.7 1.6 1.5 1 1 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) Cation_ATPase_C PF00689.21 gi|73670783|ref|YP_306798.1| - 0.044 13.5 9.9 0.066 12.9 9.9 1.3 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus TssN PF17555.2 gi|73670783|ref|YP_306798.1| - 0.062 12.7 11.3 0.077 12.4 11.3 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF2157 PF09925.9 gi|73670783|ref|YP_306798.1| - 0.12 12.1 8.0 0.19 11.5 7.9 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF4131 PF13567.6 gi|73670783|ref|YP_306798.1| - 0.21 11.2 6.8 0.57 9.8 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DUF2162 PF09930.9 gi|73670783|ref|YP_306798.1| - 1.6 8.1 13.9 5.5 6.3 13.9 1.7 1 1 0 1 1 1 0 Predicted transporter (DUF2162) EcsB PF05975.12 gi|73670783|ref|YP_306798.1| - 1.8 7.3 16.8 0.065 12.1 4.7 2.0 1 1 0 2 2 2 0 Bacterial ABC transporter protein EcsB Ni_hydr_CYTB PF01292.20 gi|73670783|ref|YP_306798.1| - 1.9 8.1 9.3 5.1 6.7 2.1 2.3 1 1 1 2 2 2 0 Prokaryotic cytochrome b561 DUF4191 PF13829.6 gi|73670783|ref|YP_306798.1| - 2.1 7.6 6.4 8.4 5.7 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) DUF423 PF04241.15 gi|73670783|ref|YP_306798.1| - 2.3 8.5 7.6 2 8.7 1.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF423) PhaG_MnhG_YufB PF03334.14 gi|73670783|ref|YP_306798.1| - 2.3 8.5 12.0 0.43 10.8 5.3 2.4 1 1 1 2 2 2 0 Na+/H+ antiporter subunit DUF3671 PF12420.8 gi|73670783|ref|YP_306798.1| - 2.3 8.3 8.6 13 5.9 8.6 2.2 1 1 0 1 1 1 0 Protein of unknown function DUF1129 PF06570.11 gi|73670783|ref|YP_306798.1| - 2.8 7.4 7.3 3.5 7.1 7.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) FA_desaturase PF00487.24 gi|73670783|ref|YP_306798.1| - 3.5 7.4 5.7 4.9 6.9 5.7 1.4 1 0 0 1 1 1 0 Fatty acid desaturase DUF4190 PF13828.6 gi|73670783|ref|YP_306798.1| - 4.4 7.1 10.9 0.95 9.3 2.3 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4190) DUF4133 PF13571.6 gi|73670783|ref|YP_306798.1| - 5.5 7.4 13.7 1.6 9.1 2.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4133) DHHC PF01529.20 gi|73670783|ref|YP_306798.1| - 7 6.8 7.5 19 5.3 7.5 1.9 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF4271 PF14093.6 gi|73670783|ref|YP_306798.1| - 7.7 6.4 21.9 66 3.3 21.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4271) DUF2530 PF10745.9 gi|73670783|ref|YP_306798.1| - 8.8 6.7 6.2 28 5.0 0.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2530) DUF2614 PF11023.8 gi|73670783|ref|YP_306798.1| - 8.9 6.4 11.9 5.3 7.2 1.7 2.1 2 0 0 2 2 2 0 Zinc-ribbon containing domain DUF2121 PF09894.9 gi|73670784|ref|YP_306799.1| - 2.5e-65 219.7 3.5 2.8e-65 219.6 3.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2121) DUF5517 PF17639.2 gi|73670784|ref|YP_306799.1| - 0.11 12.8 0.1 0.25 11.7 0.0 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5517) Adenine_deam_C PF13382.6 gi|73670785|ref|YP_306800.1| - 3.7e-59 198.9 0.1 8.1e-59 197.8 0.1 1.6 2 0 0 2 2 2 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 gi|73670785|ref|YP_306800.1| - 2.3e-32 112.7 0.0 2e-30 106.3 0.0 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|73670785|ref|YP_306800.1| - 1.9e-05 24.3 0.1 0.013 15.0 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family DUF2023 PF09633.10 gi|73670785|ref|YP_306800.1| - 0.18 11.9 0.0 0.44 10.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2023) Acetyltransf_18 PF18014.1 gi|73670786|ref|YP_306801.1| - 7.3e-34 116.3 0.0 1.3e-33 115.5 0.0 1.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73670786|ref|YP_306801.1| - 1.5e-08 34.9 0.0 8.7e-06 26.0 0.0 2.9 2 1 1 3 3 3 2 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73670786|ref|YP_306801.1| - 1.3e-06 28.7 0.0 2.5e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73670786|ref|YP_306801.1| - 3.1e-06 27.1 0.0 0.00069 19.6 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73670786|ref|YP_306801.1| - 0.011 15.9 0.0 0.069 13.3 0.0 2.2 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase COR PF16095.5 gi|73670787|ref|YP_306802.1| - 4.3e-57 193.1 0.4 8e-57 192.2 0.4 1.4 1 0 0 1 1 1 1 C-terminal of Roc, COR, domain LRR_8 PF13855.6 gi|73670787|ref|YP_306802.1| - 2.5e-31 107.2 41.1 1.4e-12 47.2 7.2 4.9 2 1 1 4 4 4 4 Leucine rich repeat LRR_4 PF12799.7 gi|73670787|ref|YP_306802.1| - 3e-31 106.9 57.0 9.3e-08 32.3 2.1 6.3 4 1 1 6 6 6 5 Leucine Rich repeats (2 copies) Roc PF08477.13 gi|73670787|ref|YP_306802.1| - 4.3e-30 104.4 0.0 9e-30 103.4 0.0 1.6 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 gi|73670787|ref|YP_306802.1| - 3.2e-19 69.1 0.0 6.8e-19 68.0 0.0 1.5 1 0 0 1 1 1 1 Ras family LRR_1 PF00560.33 gi|73670787|ref|YP_306802.1| - 2.4e-12 45.6 34.6 0.061 13.9 0.3 10.8 9 1 1 10 10 10 4 Leucine Rich Repeat Arf PF00025.21 gi|73670787|ref|YP_306802.1| - 6.3e-06 25.8 0.0 1.6e-05 24.4 0.0 1.7 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 gi|73670787|ref|YP_306802.1| - 7.2e-05 22.3 0.0 0.00013 21.4 0.0 1.5 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region LXG PF04740.12 gi|73670787|ref|YP_306802.1| - 0.0068 16.1 3.4 0.014 15.1 3.4 1.5 1 0 0 1 1 1 1 LXG domain of WXG superfamily CENP-F_leu_zip PF10473.9 gi|73670787|ref|YP_306802.1| - 0.029 14.4 3.1 0.12 12.4 3.1 2.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HypF_C PF17788.1 gi|73670787|ref|YP_306802.1| - 0.089 13.5 0.1 58 4.5 0.0 3.8 2 2 3 5 5 5 0 HypF Kae1-like domain ACT_4 PF13291.6 gi|73670787|ref|YP_306802.1| - 0.13 12.9 3.3 0.67 10.6 0.0 3.1 3 0 0 3 3 2 0 ACT domain VASP_tetra PF08776.11 gi|73670787|ref|YP_306802.1| - 0.73 9.5 2.9 0.69 9.5 0.9 2.0 2 0 0 2 2 2 0 VASP tetramerisation domain FapA PF03961.13 gi|73670787|ref|YP_306802.1| - 0.78 8.3 9.5 0.013 14.2 1.6 2.0 2 1 0 2 2 2 0 Flagellar Assembly Protein A DUF4763 PF15960.5 gi|73670787|ref|YP_306802.1| - 3.6 6.8 8.0 0.23 10.7 1.7 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4763) Hydantoinase_B PF02538.14 gi|73670788|ref|YP_306803.1| - 5e-209 695.0 0.1 8.3e-209 694.3 0.1 1.4 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.18 gi|73670788|ref|YP_306803.1| - 2.6e-129 430.6 0.4 5.9e-129 429.5 0.4 1.7 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|73670788|ref|YP_306803.1| - 1.4e-59 200.8 0.0 9.5e-58 194.8 0.0 2.8 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase N-terminal region Rotamase PF00639.21 gi|73670788|ref|YP_306803.1| - 0.02 15.8 0.4 0.36 11.8 0.1 2.5 2 0 0 2 2 2 0 PPIC-type PPIASE domain TIG PF01833.24 gi|73670789|ref|YP_306804.1| - 5.3e-10 39.2 4.5 5.3e-10 39.2 4.5 3.2 3 1 0 3 3 3 1 IPT/TIG domain Big_7 PF17957.1 gi|73670789|ref|YP_306804.1| - 0.003 18.3 0.8 0.003 18.3 0.8 3.2 3 1 0 3 3 3 1 Bacterial Ig domain SpaA PF17802.1 gi|73670789|ref|YP_306804.1| - 0.02 15.2 0.4 0.02 15.2 0.4 2.6 2 1 1 3 3 3 0 Prealbumin-like fold domain DUF4843 PF16132.5 gi|73670789|ref|YP_306804.1| - 0.025 14.1 0.0 0.064 12.8 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4843) AglB_L1 PF18079.1 gi|73670789|ref|YP_306804.1| - 0.027 14.7 1.3 0.27 11.5 0.0 3.0 3 1 0 3 3 3 0 Archaeal glycosylation protein B long peripheral domain DUF4179 PF13786.6 gi|73670789|ref|YP_306804.1| - 0.045 14.2 0.0 0.14 12.6 0.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4179) CarboxypepD_reg PF13620.6 gi|73670789|ref|YP_306804.1| - 0.7 10.2 7.9 0.45 10.8 0.5 3.4 2 2 1 3 3 3 0 Carboxypeptidase regulatory-like domain Big_5 PF13205.6 gi|73670790|ref|YP_306805.1| - 2.2e-07 31.6 0.0 2.7e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial Ig-like domain ATP-synt_E PF05680.12 gi|73670791|ref|YP_306806.1| - 0.047 14.0 2.6 1 9.8 0.4 2.2 1 1 1 2 2 2 0 ATP synthase E chain Flavin_Reduct PF01613.18 gi|73670792|ref|YP_306807.1| - 1.6e-28 99.7 0.0 1.8e-28 99.5 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Aldo_ket_red PF00248.21 gi|73670793|ref|YP_306808.1| - 3.7e-41 141.2 0.0 5.9e-40 137.3 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|73670793|ref|YP_306808.1| - 4.7e-14 52.7 7.0 1.1e-13 51.5 7.0 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73670793|ref|YP_306808.1| - 2e-08 34.3 7.7 4.1e-08 33.3 7.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73670793|ref|YP_306808.1| - 1.3e-06 28.6 1.4 0.021 15.0 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|73670793|ref|YP_306808.1| - 2e-05 24.3 2.7 7.9e-05 22.4 0.1 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_21 PF14697.6 gi|73670793|ref|YP_306808.1| - 5.3e-05 23.3 7.5 0.018 15.2 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73670793|ref|YP_306808.1| - 9.6e-05 22.8 6.5 0.00022 21.6 6.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73670793|ref|YP_306808.1| - 0.00067 20.6 6.1 0.012 16.5 0.7 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|73670793|ref|YP_306808.1| - 0.00094 18.9 10.6 0.0019 18.0 2.5 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73670793|ref|YP_306808.1| - 0.0023 18.0 11.1 0.0094 16.1 1.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|73670793|ref|YP_306808.1| - 0.0062 17.4 5.7 1.4 9.9 1.6 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain PA_decarbox PF05870.11 gi|73670793|ref|YP_306808.1| - 0.043 13.4 0.1 5.7 6.6 0.0 2.3 2 0 0 2 2 2 0 Phenolic acid decarboxylase (PAD) Med27 PF11571.8 gi|73670793|ref|YP_306808.1| - 0.092 13.1 1.8 0.36 11.2 0.1 2.3 2 0 0 2 2 2 0 Mediator complex subunit 27 Fer4_7 PF12838.7 gi|73670793|ref|YP_306808.1| - 0.31 11.7 14.4 2.7 8.6 14.6 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670793|ref|YP_306808.1| - 1.2 9.9 14.6 0.82 10.3 3.8 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73670793|ref|YP_306808.1| - 7.9 7.1 9.0 0.24 12.0 0.4 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Flavodoxin_1 PF00258.25 gi|73670794|ref|YP_306809.1| - 7.2e-14 52.2 0.0 1.2e-13 51.5 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin Lactamase_B PF00753.27 gi|73670794|ref|YP_306809.1| - 2.8e-11 43.8 0.0 4.4e-11 43.2 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|73670794|ref|YP_306809.1| - 0.00028 20.5 0.0 0.00055 19.5 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF3688 PF12461.8 gi|73670794|ref|YP_306809.1| - 0.1 11.0 0.1 0.14 10.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3688) ANAPC4_WD40 PF12894.7 gi|73670796|ref|YP_306811.1| - 1.3e-05 25.4 0.0 0.0011 19.2 0.0 3.4 4 0 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 gi|73670796|ref|YP_306811.1| - 4.6e-05 23.2 3.5 0.023 14.6 0.0 4.2 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat ABC2_membrane_2 PF12679.7 gi|73670797|ref|YP_306812.1| - 1.6e-38 132.6 14.1 1.7e-37 129.3 14.1 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|73670797|ref|YP_306812.1| - 7.4e-08 32.6 14.2 7.4e-08 32.6 14.2 2.4 2 1 1 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|73670797|ref|YP_306812.1| - 3.6e-07 29.9 11.2 3.6e-07 29.9 11.2 3.1 3 0 0 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|73670797|ref|YP_306812.1| - 1.8e-05 24.0 25.4 1.8e-05 24.0 25.4 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein Mobilization_B PF17511.2 gi|73670797|ref|YP_306812.1| - 0.22 11.9 0.8 0.42 11.0 0.8 1.5 1 0 0 1 1 1 0 Mobilization protein B UPF0542 PF15086.6 gi|73670797|ref|YP_306812.1| - 1.4 8.9 3.9 0.81 9.7 0.3 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0542 Fig1 PF12351.8 gi|73670797|ref|YP_306812.1| - 6.3 6.7 19.0 0.018 14.9 5.2 2.8 2 1 1 3 3 3 0 Ca2+ regulator and membrane fusion protein Fig1 ABC2_membrane_2 PF12679.7 gi|73670798|ref|YP_306813.1| - 1.4e-33 116.4 21.7 2.6e-33 115.5 21.7 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|73670798|ref|YP_306813.1| - 2.3e-05 23.7 36.0 7e-05 22.1 36.0 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|73670798|ref|YP_306813.1| - 0.00022 21.3 21.7 0.00022 21.3 21.7 2.8 2 1 1 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|73670798|ref|YP_306813.1| - 0.82 9.2 37.8 0.065 12.8 29.0 2.7 2 1 0 2 2 2 0 ABC-2 family transporter protein HTH_24 PF13412.6 gi|73670799|ref|YP_306814.1| - 5.6e-14 51.4 1.1 4.2e-08 32.6 0.3 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|73670799|ref|YP_306814.1| - 4.2e-09 36.1 0.0 0.0023 17.8 0.0 2.6 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|73670799|ref|YP_306814.1| - 1.3e-08 34.6 0.5 6.6e-05 22.8 0.2 2.5 2 0 0 2 2 2 2 HTH domain MarR PF01047.22 gi|73670799|ref|YP_306814.1| - 1.3e-06 28.2 0.0 0.06 13.3 0.0 2.3 2 0 0 2 2 2 2 MarR family Penicillinase_R PF03965.16 gi|73670799|ref|YP_306814.1| - 1.9e-06 28.2 0.1 0.0089 16.4 0.0 2.5 1 1 1 2 2 2 2 Penicillinase repressor HTH_20 PF12840.7 gi|73670799|ref|YP_306814.1| - 4.9e-06 26.5 0.0 0.021 14.9 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain TrmB PF01978.19 gi|73670799|ref|YP_306814.1| - 2.3e-05 24.2 0.2 0.003 17.4 0.0 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_41 PF14502.6 gi|73670799|ref|YP_306814.1| - 4.1e-05 23.2 0.0 0.1 12.3 0.0 2.7 2 1 1 3 3 3 2 Helix-turn-helix domain MarR_2 PF12802.7 gi|73670799|ref|YP_306814.1| - 0.00018 21.3 0.0 0.24 11.3 0.0 2.5 2 0 0 2 2 2 2 MarR family HTH_Crp_2 PF13545.6 gi|73670799|ref|YP_306814.1| - 0.0013 18.6 0.0 0.0048 16.9 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_17 PF12728.7 gi|73670799|ref|YP_306814.1| - 0.0019 18.4 0.6 6.4 7.0 0.0 3.2 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_36 PF13730.6 gi|73670799|ref|YP_306814.1| - 0.0019 18.1 0.4 0.018 15.0 0.1 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain GerE PF00196.19 gi|73670799|ref|YP_306814.1| - 0.0063 16.0 0.4 1 8.9 0.1 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family MerR_1 PF13411.6 gi|73670799|ref|YP_306814.1| - 0.0063 16.6 0.2 0.66 10.1 0.0 2.3 2 0 0 2 2 2 1 MerR HTH family regulatory protein GntR PF00392.21 gi|73670799|ref|YP_306814.1| - 0.0082 15.8 0.0 0.14 11.9 0.0 2.5 2 1 0 2 2 2 1 Bacterial regulatory proteins, gntR family PaaX PF07848.12 gi|73670799|ref|YP_306814.1| - 0.0083 16.3 0.0 0.94 9.7 0.0 2.3 2 0 0 2 2 2 1 PaaX-like protein RNA_pol_Rpc34 PF05158.12 gi|73670799|ref|YP_306814.1| - 0.018 14.5 0.2 0.033 13.6 0.2 1.4 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit RepL PF05732.11 gi|73670799|ref|YP_306814.1| - 0.027 13.9 1.2 0.051 13.0 0.3 1.8 2 0 0 2 2 2 0 Firmicute plasmid replication protein (RepL) HTH_Tnp_IS630 PF01710.16 gi|73670799|ref|YP_306814.1| - 0.031 14.3 0.9 0.29 11.2 0.3 2.1 2 0 0 2 2 2 0 Transposase HTH_28 PF13518.6 gi|73670799|ref|YP_306814.1| - 0.044 13.9 0.1 4.4 7.5 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|73670799|ref|YP_306814.1| - 0.048 13.5 0.0 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 IclR helix-turn-helix domain TetR_N PF00440.23 gi|73670799|ref|YP_306814.1| - 0.05 13.4 0.0 1.6 8.6 0.0 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family FaeA PF04703.12 gi|73670799|ref|YP_306814.1| - 0.054 13.9 0.7 1.2 9.6 0.1 2.3 2 0 0 2 2 2 0 FaeA-like protein HTH_3 PF01381.22 gi|73670799|ref|YP_306814.1| - 0.059 13.4 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix DUF2639 PF11121.8 gi|73670799|ref|YP_306814.1| - 0.13 12.3 2.5 0.62 10.1 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2639) Fe_dep_repress PF01325.19 gi|73670799|ref|YP_306814.1| - 0.13 12.4 0.0 0.33 11.2 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain PD40 PF07676.12 gi|73670800|ref|YP_306815.1| - 7.1e-14 51.3 9.0 0.043 13.8 0.0 6.5 6 0 0 6 6 6 5 WD40-like Beta Propeller Repeat eIF2A PF08662.11 gi|73670800|ref|YP_306815.1| - 0.0026 17.7 0.5 0.78 9.6 0.0 4.3 4 1 1 5 5 5 1 Eukaryotic translation initiation factor eIF2A Pectate_lyase22 PF14583.6 gi|73670800|ref|YP_306815.1| - 0.0031 16.2 0.0 2.4 6.7 0.0 2.8 2 1 0 2 2 2 2 Oligogalacturonate lyase DUF5050 PF16472.5 gi|73670800|ref|YP_306815.1| - 0.0041 16.4 0.2 0.041 13.1 0.1 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF5050) ANAPC4_WD40 PF12894.7 gi|73670800|ref|YP_306815.1| - 0.034 14.5 0.0 99 3.3 0.0 4.6 4 2 2 6 6 6 0 Anaphase-promoting complex subunit 4 WD40 domain Gmad1 PF10647.9 gi|73670800|ref|YP_306815.1| - 0.22 11.3 0.0 2.4 7.8 0.0 2.1 2 0 0 2 2 2 0 Lipoprotein LpqB beta-propeller domain PD40 PF07676.12 gi|73670801|ref|YP_306816.1| - 1.6e-14 53.3 11.5 0.0029 17.5 0.0 7.8 8 0 0 8 8 8 6 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 gi|73670801|ref|YP_306816.1| - 2.6e-06 26.4 6.0 0.39 9.4 0.2 4.6 3 1 1 5 5 5 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region ANAPC4_WD40 PF12894.7 gi|73670801|ref|YP_306816.1| - 4.3e-05 23.7 0.2 0.069 13.5 0.0 4.4 3 3 2 5 5 5 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 gi|73670802|ref|YP_306817.1| - 4.3e-13 48.8 2.4 0.41 10.6 0.0 7.6 7 0 0 7 7 7 4 WD40-like Beta Propeller Repeat ANAPC4_WD40 PF12894.7 gi|73670802|ref|YP_306817.1| - 0.0003 21.0 0.0 1.1 9.7 0.0 4.7 5 1 0 5 5 5 1 Anaphase-promoting complex subunit 4 WD40 domain Sortilin-Vps10 PF15902.5 gi|73670802|ref|YP_306817.1| - 0.00074 18.4 0.1 0.0019 17.0 0.0 1.6 2 0 0 2 2 2 1 Sortilin, neurotensin receptor 3, Pectate_lyase22 PF14583.6 gi|73670802|ref|YP_306817.1| - 0.0066 15.2 0.3 1.2 7.7 0.0 3.5 2 1 1 4 4 4 1 Oligogalacturonate lyase WD40 PF00400.32 gi|73670802|ref|YP_306817.1| - 0.014 16.2 2.8 8.6 7.4 0.0 4.0 4 0 0 4 4 4 0 WD domain, G-beta repeat DUF2118 PF09891.9 gi|73670802|ref|YP_306817.1| - 0.16 11.9 0.0 0.43 10.5 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) ABC2_membrane_2 PF12679.7 gi|73670803|ref|YP_306818.1| - 9e-31 107.2 18.7 2e-30 106.1 18.7 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|73670803|ref|YP_306818.1| - 3.4e-08 33.0 25.2 3.4e-08 33.0 25.2 1.5 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|73670803|ref|YP_306818.1| - 8.8e-05 22.1 18.0 8.8e-05 22.1 18.0 2.3 3 0 0 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|73670803|ref|YP_306818.1| - 0.00071 19.6 19.5 0.00071 19.6 19.5 2.3 2 1 0 2 2 2 1 ABC-2 family transporter protein Cytochrome-c551 PF10643.9 gi|73670803|ref|YP_306818.1| - 1.3 8.5 9.7 2.1 7.8 9.7 1.3 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 ABC2_membrane_2 PF12679.7 gi|73670804|ref|YP_306819.1| - 7.8e-31 107.4 15.5 9.6e-27 94.0 13.2 2.0 1 1 1 2 2 2 2 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|73670804|ref|YP_306819.1| - 1.9e-10 40.4 26.9 2.5e-10 40.0 26.9 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|73670804|ref|YP_306819.1| - 0.00062 19.4 19.3 0.00062 19.4 19.3 2.1 2 1 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|73670804|ref|YP_306819.1| - 0.0016 18.4 13.3 0.0016 18.4 13.3 2.7 2 1 1 3 3 3 1 ABC-2 family transporter protein BCLP PF12304.8 gi|73670804|ref|YP_306819.1| - 0.0027 17.3 0.6 0.0027 17.3 0.6 1.7 1 1 0 1 1 1 1 Beta-casein like protein PD40 PF07676.12 gi|73670805|ref|YP_306820.1| - 1.3e-12 47.2 8.5 0.24 11.4 0.0 8.0 8 0 0 8 8 8 5 WD40-like Beta Propeller Repeat eIF2A PF08662.11 gi|73670805|ref|YP_306820.1| - 0.00012 22.1 4.7 0.16 11.9 0.6 4.1 2 2 2 4 4 4 2 Eukaryotic translation initiation factor eIF2A ANAPC4_WD40 PF12894.7 gi|73670805|ref|YP_306820.1| - 0.00014 22.1 0.1 0.56 10.6 0.0 5.0 4 2 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain Sortilin-Vps10 PF15902.5 gi|73670805|ref|YP_306820.1| - 0.0015 17.4 0.0 0.0028 16.5 0.0 1.4 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, DUF2118 PF09891.9 gi|73670805|ref|YP_306820.1| - 0.01 15.8 0.0 0.03 14.3 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) Pectate_lyase22 PF14583.6 gi|73670805|ref|YP_306820.1| - 0.015 14.0 0.3 2.9 6.5 0.0 3.4 2 1 0 3 3 3 0 Oligogalacturonate lyase WD40 PF00400.32 gi|73670805|ref|YP_306820.1| - 0.017 16.0 1.5 8.5 7.4 0.0 4.0 4 0 0 4 4 4 0 WD domain, G-beta repeat PLL PF18587.1 gi|73670805|ref|YP_306820.1| - 0.11 12.7 0.0 0.32 11.2 0.0 1.8 1 0 0 1 1 1 0 PTX/LNS-Like (PLL) domain NPCBM_assoc PF10633.9 gi|73670807|ref|YP_306822.1| - 2.7e-24 85.2 2.0 3.8e-05 23.8 0.0 4.6 4 0 0 4 4 4 4 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|73670807|ref|YP_306822.1| - 9.4e-07 29.0 4.8 0.49 10.7 0.1 4.9 4 2 1 5 5 5 3 CARDB MG2 PF01835.19 gi|73670807|ref|YP_306822.1| - 1e-06 29.1 0.1 1.8 9.1 0.0 4.2 3 2 1 4 4 4 2 MG2 domain Transglut_N PF00868.20 gi|73670807|ref|YP_306822.1| - 5.9e-06 26.6 0.1 0.25 11.7 0.0 4.0 4 0 0 4 4 3 2 Transglutaminase family FixG_C PF11614.8 gi|73670807|ref|YP_306822.1| - 7.8e-06 26.1 6.2 0.025 14.8 0.5 5.7 1 1 5 7 7 7 2 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF4625 PF15418.6 gi|73670807|ref|YP_306822.1| - 9.1e-05 22.7 0.0 0.43 10.8 0.0 3.5 4 1 1 5 5 5 2 Domain of unknown function (DUF4625) DUF11 PF01345.18 gi|73670807|ref|YP_306822.1| - 0.00019 21.7 1.8 0.041 14.2 0.1 4.1 4 1 0 4 4 4 1 Domain of unknown function DUF11 Fn3-like PF14310.6 gi|73670807|ref|YP_306822.1| - 0.0016 18.5 0.5 0.4 10.8 0.0 4.1 4 0 0 4 4 4 1 Fibronectin type III-like domain DUF916 PF06030.12 gi|73670807|ref|YP_306822.1| - 0.0018 18.4 3.6 1.2 9.3 0.8 5.2 3 2 1 5 5 5 1 Bacterial protein of unknown function (DUF916) SoxY PF13501.6 gi|73670807|ref|YP_306822.1| - 0.0066 16.6 0.4 5.2 7.3 0.0 4.0 3 1 1 4 4 4 1 Sulfur oxidation protein SoxY fn3_5 PF06280.12 gi|73670807|ref|YP_306822.1| - 0.011 16.4 5.9 0.68 10.6 0.1 4.6 3 3 1 4 4 4 0 Fn3-like domain Big_3_2 PF12245.8 gi|73670807|ref|YP_306822.1| - 0.02 15.2 1.6 0.74 10.1 0.0 2.8 1 1 0 2 2 2 0 Bacterial Ig-like domain Qn_am_d_aIII PF09099.10 gi|73670807|ref|YP_306822.1| - 0.022 15.1 0.1 1 9.8 0.0 3.2 3 0 0 3 3 3 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain III SCO1-SenC PF02630.14 gi|73670807|ref|YP_306822.1| - 0.024 14.6 0.0 0.061 13.2 0.0 1.6 1 0 0 1 1 1 0 SCO1/SenC Mfa_like_1 PF13149.6 gi|73670807|ref|YP_306822.1| - 0.079 13.0 0.9 5.4 7.0 0.1 2.7 2 1 1 3 3 3 0 Fimbrillin-like ABC_tran PF00005.27 gi|73670808|ref|YP_306823.1| - 1.8e-27 96.5 0.0 4.9e-27 95.1 0.0 1.7 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|73670808|ref|YP_306823.1| - 4.9e-13 49.6 0.1 1.1e-07 32.0 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|73670808|ref|YP_306823.1| - 0.0026 18.2 0.0 0.0044 17.4 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|73670808|ref|YP_306823.1| - 0.0031 18.0 0.1 0.0065 17.0 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|73670808|ref|YP_306823.1| - 0.0036 17.7 1.3 0.037 14.4 0.3 2.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|73670808|ref|YP_306823.1| - 0.0037 17.0 0.0 0.09 12.5 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 gi|73670808|ref|YP_306823.1| - 0.004 16.9 0.0 0.0091 15.7 0.0 1.8 1 1 0 1 1 1 1 AAA domain DUF4162 PF13732.6 gi|73670808|ref|YP_306823.1| - 0.023 15.4 0.6 0.058 14.1 0.6 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) SRP54 PF00448.22 gi|73670808|ref|YP_306823.1| - 0.031 13.9 0.0 0.06 13.0 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_22 PF13401.6 gi|73670808|ref|YP_306823.1| - 0.04 14.2 0.1 0.19 12.0 0.1 2.2 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|73670808|ref|YP_306823.1| - 0.095 12.5 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|73670808|ref|YP_306823.1| - 0.15 11.8 0.1 2.1 8.0 0.1 2.3 2 0 0 2 2 2 0 AAA domain HTH_24 PF13412.6 gi|73670809|ref|YP_306824.1| - 2.5e-14 52.6 0.4 3.3e-07 29.7 0.1 2.4 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|73670809|ref|YP_306824.1| - 2.7e-13 49.6 0.0 2.4e-06 27.3 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73670809|ref|YP_306824.1| - 9.3e-11 41.6 0.0 3.6e-05 23.7 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.7 gi|73670809|ref|YP_306824.1| - 7.4e-06 25.8 0.0 0.14 12.1 0.0 2.3 2 0 0 2 2 2 2 MarR family MarR PF01047.22 gi|73670809|ref|YP_306824.1| - 1.3e-05 25.0 0.0 0.032 14.2 0.0 2.4 2 0 0 2 2 2 2 MarR family FaeA PF04703.12 gi|73670809|ref|YP_306824.1| - 3.8e-05 24.0 0.1 0.1 13.0 0.0 2.3 2 0 0 2 2 2 2 FaeA-like protein TBPIP PF07106.13 gi|73670809|ref|YP_306824.1| - 0.00013 21.8 0.8 0.0015 18.4 0.1 2.4 1 1 1 2 2 2 1 TBPIP/Hop2 winged helix domain HTH_41 PF14502.6 gi|73670809|ref|YP_306824.1| - 0.0012 18.5 0.0 0.071 12.8 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|73670809|ref|YP_306824.1| - 0.0015 18.7 0.1 1.7 8.9 0.0 2.5 2 0 0 2 2 2 2 Winged helix DNA-binding domain TrmB PF01978.19 gi|73670809|ref|YP_306824.1| - 0.0028 17.5 0.0 0.038 13.9 0.0 2.2 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|73670809|ref|YP_306824.1| - 0.0029 17.4 0.0 0.53 10.1 0.0 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain RepL PF05732.11 gi|73670809|ref|YP_306824.1| - 0.0032 16.9 0.2 0.0084 15.5 0.2 1.6 2 0 0 2 2 2 1 Firmicute plasmid replication protein (RepL) Rrf2 PF02082.20 gi|73670809|ref|YP_306824.1| - 0.0041 17.4 0.0 4.3 7.8 0.0 2.3 2 0 0 2 2 2 2 Transcriptional regulator HTH_12 PF08461.10 gi|73670809|ref|YP_306824.1| - 0.0075 16.2 0.0 0.86 9.6 0.0 2.6 2 1 0 2 2 2 1 Ribonuclease R winged-helix domain HTH_11 PF08279.12 gi|73670809|ref|YP_306824.1| - 0.0095 15.9 0.0 0.54 10.2 0.0 2.3 2 0 0 2 2 2 1 HTH domain B-block_TFIIIC PF04182.12 gi|73670809|ref|YP_306824.1| - 0.016 15.3 0.0 4.3 7.6 0.0 2.4 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC HTH_45 PF14947.6 gi|73670809|ref|YP_306824.1| - 0.022 14.7 0.3 1.9 8.5 0.4 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix Mnd1 PF03962.15 gi|73670809|ref|YP_306824.1| - 0.024 14.9 0.0 0.18 12.1 0.0 2.2 2 0 0 2 2 2 0 Mnd1 HTH domain Sulfolobus_pRN PF05584.11 gi|73670809|ref|YP_306824.1| - 0.029 14.4 0.2 0.069 13.2 0.2 1.7 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein DUF2250 PF10007.9 gi|73670809|ref|YP_306824.1| - 0.085 13.0 0.1 0.17 12.0 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) NosD PF05048.13 gi|73670810|ref|YP_306825.1| - 1.9e-35 122.3 92.9 5.8e-21 74.8 47.8 2.4 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670810|ref|YP_306825.1| - 1.7e-27 96.2 76.6 1.1e-22 80.5 39.2 3.1 2 1 1 3 3 3 2 Right handed beta helix region GreA_GreB PF01272.19 gi|73670810|ref|YP_306825.1| - 0.022 14.6 0.6 0.22 11.5 0.0 2.6 2 0 0 2 2 2 0 Transcription elongation factor, GreA/GreB, C-term DUF4277 PF14104.6 gi|73670811|ref|YP_306826.1| - 3.7e-43 146.3 0.0 7.4e-43 145.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|73670811|ref|YP_306826.1| - 6.4e-18 65.2 1.5 2.3e-17 63.4 1.5 1.8 1 1 0 1 1 1 1 Transposase DDE domain Peptidase_M28 PF04389.17 gi|73670812|ref|YP_306827.1| - 1e-30 106.9 0.0 4.7e-30 104.8 0.0 2.0 1 1 0 1 1 1 1 Peptidase family M28 Peptidase_M20 PF01546.28 gi|73670812|ref|YP_306827.1| - 2.3e-07 30.8 0.0 2.7e-07 30.5 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 DUF4910 PF16254.5 gi|73670812|ref|YP_306827.1| - 1.7e-05 23.8 0.1 6.7e-05 21.9 0.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4910) Peptidase_M42 PF05343.14 gi|73670812|ref|YP_306827.1| - 0.00036 19.7 0.1 0.0011 18.1 0.0 1.7 2 0 0 2 2 2 1 M42 glutamyl aminopeptidase Nicastrin PF05450.15 gi|73670812|ref|YP_306827.1| - 0.0027 17.2 0.3 0.12 11.9 0.0 2.5 2 0 0 2 2 2 1 Nicastrin Gaa1 PF04114.14 gi|73670812|ref|YP_306827.1| - 0.059 12.4 0.0 0.26 10.2 0.0 1.8 2 0 0 2 2 2 0 Gaa1-like, GPI transamidase component HYR PF02494.16 gi|73670812|ref|YP_306827.1| - 0.07 13.5 0.1 0.25 11.7 0.1 2.0 1 0 0 1 1 1 0 HYR domain HTH_22 PF13309.6 gi|73670813|ref|YP_306828.1| - 0.057 13.5 0.1 0.13 12.4 0.1 1.6 1 0 0 1 1 1 0 HTH domain Membrane_bind PF14564.6 gi|73670813|ref|YP_306828.1| - 0.059 13.8 0.1 0.12 12.8 0.1 1.5 1 0 0 1 1 1 0 Membrane binding CTU2 PF10288.9 gi|73670813|ref|YP_306828.1| - 5.8 7.2 10.7 1.8 8.8 4.0 2.3 1 1 1 2 2 2 0 Cytoplasmic tRNA 2-thiolation protein 2 DUF2957 PF11170.8 gi|73670814|ref|YP_306829.1| - 0.021 13.7 0.1 0.025 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2957) PPC PF04151.15 gi|73670814|ref|YP_306829.1| - 0.19 12.9 4.0 0.11 13.6 1.8 1.8 1 1 1 2 2 2 0 Bacterial pre-peptidase C-terminal domain HTH_24 PF13412.6 gi|73670815|ref|YP_306830.1| - 3.8e-11 42.4 0.8 2.5e-06 27.0 0.1 2.7 2 1 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|73670815|ref|YP_306830.1| - 4.1e-09 36.4 0.0 7.5e-05 22.7 0.0 2.2 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.20 gi|73670815|ref|YP_306830.1| - 6.2e-09 35.6 0.1 0.0035 17.2 0.0 2.8 2 1 1 3 3 3 2 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|73670815|ref|YP_306830.1| - 0.00018 21.3 0.0 0.31 10.9 0.0 2.6 2 1 0 2 2 2 2 IclR helix-turn-helix domain TrmB PF01978.19 gi|73670815|ref|YP_306830.1| - 0.00028 20.7 0.0 0.018 14.9 0.0 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_41 PF14502.6 gi|73670815|ref|YP_306830.1| - 0.0013 18.4 0.1 0.56 9.9 0.0 2.5 2 1 0 2 2 2 1 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|73670815|ref|YP_306830.1| - 0.0022 18.3 0.2 0.16 12.3 0.1 2.5 1 1 1 2 2 2 1 Penicillinase repressor HTH_11 PF08279.12 gi|73670815|ref|YP_306830.1| - 0.0037 17.2 0.5 0.038 14.0 0.0 2.5 2 1 0 2 2 2 1 HTH domain HTH_Crp_2 PF13545.6 gi|73670815|ref|YP_306830.1| - 0.0047 16.9 0.1 0.012 15.5 0.1 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain FaeA PF04703.12 gi|73670815|ref|YP_306830.1| - 0.0065 16.8 0.4 2.1 8.8 0.0 2.4 2 0 0 2 2 2 1 FaeA-like protein RepL PF05732.11 gi|73670815|ref|YP_306830.1| - 0.0088 15.5 1.3 0.038 13.4 0.3 2.1 2 0 0 2 2 2 1 Firmicute plasmid replication protein (RepL) MerR_1 PF13411.6 gi|73670815|ref|YP_306830.1| - 0.013 15.6 0.7 6.5 6.9 0.1 2.5 2 0 0 2 2 2 0 MerR HTH family regulatory protein HTH_17 PF12728.7 gi|73670815|ref|YP_306830.1| - 0.023 14.9 1.6 5.9 7.2 0.1 3.3 2 1 1 3 3 3 0 Helix-turn-helix domain GntR PF00392.21 gi|73670815|ref|YP_306830.1| - 0.029 14.0 0.0 4.2 7.1 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Rad51 PF08423.11 gi|73670815|ref|YP_306830.1| - 0.042 13.1 0.1 0.062 12.6 0.1 1.3 1 0 0 1 1 1 0 Rad51 DUF3489 PF11994.8 gi|73670815|ref|YP_306830.1| - 0.05 13.7 0.1 3.4 7.8 0.0 2.6 3 0 0 3 3 2 0 Protein of unknown function (DUF3489) HTH_34 PF13601.6 gi|73670815|ref|YP_306830.1| - 0.073 13.3 0.0 3.1 8.0 0.0 2.4 2 0 0 2 2 2 0 Winged helix DNA-binding domain TetR_N PF00440.23 gi|73670815|ref|YP_306830.1| - 0.15 11.9 0.5 2.4 8.0 0.0 2.8 3 0 0 3 3 3 0 Bacterial regulatory proteins, tetR family HTH_AsnC-type PF13404.6 gi|73670815|ref|YP_306830.1| - 0.15 11.9 0.1 1.1 9.1 0.0 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_28 PF13518.6 gi|73670815|ref|YP_306830.1| - 0.16 12.2 0.4 1.4 9.1 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|73670815|ref|YP_306830.1| - 0.19 11.8 0.1 41 4.3 0.0 3.0 3 0 0 3 3 3 0 Winged helix-turn helix LolA_like PF17131.4 gi|73670817|ref|YP_306832.1| - 1.2e-06 28.4 0.3 2e-06 27.7 0.3 1.5 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein SecY PF00344.20 gi|73670817|ref|YP_306832.1| - 0.059 12.6 0.1 0.08 12.2 0.1 1.1 1 0 0 1 1 1 0 SecY translocase DcuA_DcuB PF03605.14 gi|73670818|ref|YP_306833.1| - 0.087 11.7 1.2 0.2 10.5 1.2 1.6 1 1 0 1 1 1 0 Anaerobic c4-dicarboxylate membrane transporter FixQ PF05545.11 gi|73670818|ref|YP_306833.1| - 0.27 11.2 4.9 63 3.6 0.0 4.0 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ TRIQK PF15168.6 gi|73670818|ref|YP_306833.1| - 0.48 10.4 0.1 0.48 10.4 0.1 2.2 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family DUF2678 PF10856.8 gi|73670818|ref|YP_306833.1| - 5.1 7.1 10.6 1.9 8.4 3.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2678) CitMHS PF03600.16 gi|73670818|ref|YP_306833.1| - 5.8 6.0 6.8 0.29 10.3 0.3 1.8 1 1 1 2 2 2 0 Citrate transporter DsbD PF02683.15 gi|73670819|ref|YP_306834.1| - 1.5e-20 74.0 23.4 2.3e-20 73.4 23.4 1.3 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF836 PF05768.14 gi|73670819|ref|YP_306834.1| - 0.0029 18.0 0.1 0.0048 17.3 0.1 1.3 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_3 PF13192.6 gi|73670819|ref|YP_306834.1| - 0.0059 16.6 0.1 0.011 15.8 0.1 1.4 1 0 0 1 1 1 1 Thioredoxin domain TraF PF13728.6 gi|73670819|ref|YP_306834.1| - 0.026 14.4 0.0 0.043 13.6 0.0 1.3 1 0 0 1 1 1 0 F plasmid transfer operon protein Thioredoxin PF00085.20 gi|73670819|ref|YP_306834.1| - 0.039 13.9 0.1 0.086 12.8 0.1 1.6 2 0 0 2 2 2 0 Thioredoxin DUF2207 PF09972.9 gi|73670819|ref|YP_306834.1| - 2.8 6.6 11.7 4.2 6.0 3.3 2.5 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) LolA_like PF17131.4 gi|73670820|ref|YP_306835.1| - 1.1e-15 57.9 1.7 2.5e-15 56.7 1.7 1.5 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein DUF4367 PF14285.6 gi|73670820|ref|YP_306835.1| - 6.2e-14 52.4 5.1 6.2e-14 52.4 5.1 3.4 2 2 1 3 3 3 1 Domain of unknown function (DUF4367) LolA PF03548.15 gi|73670820|ref|YP_306835.1| - 2.8e-10 40.2 1.3 2.8e-10 40.2 1.3 1.6 2 0 0 2 2 2 1 Outer membrane lipoprotein carrier protein LolA DUF1571 PF07608.11 gi|73670820|ref|YP_306835.1| - 1.5e-07 31.1 0.1 3.3e-07 29.9 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1571) DUF2092 PF09865.9 gi|73670820|ref|YP_306835.1| - 1.2e-06 28.0 1.8 0.00015 21.2 0.3 2.5 2 1 0 2 2 2 1 Predicted periplasmic protein (DUF2092) MucB_RseB PF03888.14 gi|73670820|ref|YP_306835.1| - 1.8e-06 27.6 0.1 5.4e-06 26.1 0.0 1.8 2 0 0 2 2 2 1 MucB/RseB N-terminal domain LolA_2 PF16584.5 gi|73670820|ref|YP_306835.1| - 0.0084 16.0 1.9 0.015 15.2 0.6 1.9 2 1 0 2 2 2 1 Outer membrane lipoprotein carrier protein LolA DUF1329 PF07044.11 gi|73670820|ref|YP_306835.1| - 0.014 14.7 0.2 0.02 14.2 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1329) DUF4245 PF14030.6 gi|73670820|ref|YP_306835.1| - 0.056 13.5 0.0 0.17 11.9 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4245) Transthyretin PF00576.21 gi|73670820|ref|YP_306835.1| - 0.065 13.9 0.4 6.5 7.5 0.1 2.6 2 1 0 2 2 2 0 HIUase/Transthyretin family DUF3830 PF12903.7 gi|73670820|ref|YP_306835.1| - 0.091 12.4 0.5 0.33 10.6 0.0 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3830) Ribosomal_S6e PF01092.19 gi|73670821|ref|YP_306836.1| - 8.5e-44 148.5 0.2 9.6e-44 148.4 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.27 gi|73670822|ref|YP_306837.1| - 1.6e-32 112.7 0.3 1.6e-30 106.1 0.3 2.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D4 PF14578.6 gi|73670822|ref|YP_306837.1| - 4.1e-28 97.1 3.5 4.1e-28 97.1 3.5 2.7 3 0 0 3 3 3 1 Elongation factor Tu domain 4 IF-2 PF11987.8 gi|73670822|ref|YP_306837.1| - 9.3e-22 77.1 6.4 1.2e-21 76.8 1.3 3.0 3 0 0 3 3 3 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|73670822|ref|YP_306837.1| - 3.8e-13 49.6 6.3 6.5e-11 42.5 0.1 2.7 2 0 0 2 2 2 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|73670822|ref|YP_306837.1| - 9.7e-09 35.3 0.2 3.3e-08 33.6 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 gi|73670822|ref|YP_306837.1| - 0.0015 18.4 0.0 0.0047 16.8 0.0 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 gi|73670822|ref|YP_306837.1| - 0.038 14.1 0.0 0.92 9.5 0.0 2.5 2 0 0 2 2 2 0 Dynamin family PduV-EutP PF10662.9 gi|73670822|ref|YP_306837.1| - 0.043 13.6 0.0 0.48 10.2 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation DUF1908 PF08926.11 gi|73670822|ref|YP_306837.1| - 0.088 11.9 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) cobW PF02492.19 gi|73670822|ref|YP_306837.1| - 0.1 12.2 0.1 13 5.4 0.0 2.8 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 gi|73670822|ref|YP_306837.1| - 0.13 12.5 0.0 0.48 10.7 0.0 2.0 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase NDK PF00334.19 gi|73670823|ref|YP_306838.1| - 3.9e-56 188.8 0.0 4.4e-56 188.6 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.20 gi|73670824|ref|YP_306839.1| - 1.9e-18 66.4 1.1 2e-18 66.4 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e YHS PF04945.13 gi|73670824|ref|YP_306839.1| - 0.00082 19.4 1.4 0.0011 19.1 1.4 1.2 1 0 0 1 1 1 1 YHS domain Ribosomal_S28e PF01200.18 gi|73670825|ref|YP_306840.1| - 1.2e-28 98.9 0.7 1.3e-28 98.8 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.26 gi|73670826|ref|YP_306841.1| - 5.1e-26 90.2 0.7 6e-26 90.0 0.7 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|73670826|ref|YP_306841.1| - 0.0015 18.4 0.0 0.0021 17.9 0.0 1.3 1 0 0 1 1 1 1 PELOTA RNA binding domain Radical_SAM PF04055.21 gi|73670827|ref|YP_306842.1| - 1.1e-20 74.6 0.1 1.3e-20 74.4 0.1 1.1 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|73670827|ref|YP_306842.1| - 7e-08 32.6 0.0 6.8e-07 29.4 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|73670827|ref|YP_306842.1| - 0.0021 18.3 0.0 0.048 13.9 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S single cluster domain RE_XcyI PF09571.10 gi|73670827|ref|YP_306842.1| - 0.054 12.7 0.0 0.076 12.3 0.0 1.2 1 0 0 1 1 1 0 XcyI restriction endonuclease WD40 PF00400.32 gi|73670828|ref|YP_306843.1| - 6.1e-25 87.0 19.7 6.2e-05 23.7 0.2 8.4 7 1 1 8 8 8 7 WD domain, G-beta repeat PQQ_3 PF13570.6 gi|73670828|ref|YP_306843.1| - 6.9e-22 77.3 12.2 3e-06 27.6 0.1 7.2 7 0 0 7 7 7 5 PQQ-like domain PQQ PF01011.21 gi|73670828|ref|YP_306843.1| - 3.2e-20 71.0 21.4 0.00018 21.2 0.1 6.9 7 0 0 7 7 7 5 PQQ enzyme repeat PQQ_2 PF13360.6 gi|73670828|ref|YP_306843.1| - 4.1e-15 56.0 0.4 1.2e-08 34.9 0.1 2.6 1 1 1 2 2 2 2 PQQ-like domain ANAPC4_WD40 PF12894.7 gi|73670828|ref|YP_306843.1| - 2.5e-12 46.9 0.0 0.15 12.4 0.0 5.8 2 1 5 7 7 7 4 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 gi|73670828|ref|YP_306843.1| - 1.8e-06 27.9 1.2 0.094 12.6 0.1 3.9 1 1 3 4 4 4 2 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 gi|73670828|ref|YP_306843.1| - 0.00018 21.0 5.3 0.13 11.6 0.1 4.1 2 1 2 4 4 4 2 WD40-like domain BBS2_Mid PF14783.6 gi|73670828|ref|YP_306843.1| - 0.0002 21.4 0.0 0.11 12.5 0.0 3.7 3 1 1 4 4 4 1 Ciliary BBSome complex subunit 2, middle region GXGXG PF01493.19 gi|73670828|ref|YP_306843.1| - 0.00021 21.0 0.1 0.12 11.9 0.1 3.7 2 1 2 4 4 4 1 GXGXG motif Phytase PF02333.15 gi|73670828|ref|YP_306843.1| - 0.00032 19.8 0.5 0.56 9.1 0.1 2.2 2 0 0 2 2 2 2 Phytase SGL PF08450.12 gi|73670828|ref|YP_306843.1| - 0.0016 18.0 0.3 0.66 9.5 0.0 3.3 2 2 1 3 3 3 1 SMP-30/Gluconolactonase/LRE-like region Ge1_WD40 PF16529.5 gi|73670828|ref|YP_306843.1| - 0.035 13.1 4.1 1.2 8.0 0.1 3.5 2 2 1 3 3 3 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Glycoprot_B_PH1 PF17416.2 gi|73670828|ref|YP_306843.1| - 0.039 13.6 0.2 0.61 9.7 0.0 2.3 2 0 0 2 2 2 0 Herpesvirus Glycoprotein B TolB_like PF15869.5 gi|73670828|ref|YP_306843.1| - 0.077 12.2 0.2 14 4.8 0.0 3.4 3 1 0 3 3 3 0 TolB-like 6-blade propeller-like PPC PF04151.15 gi|73670828|ref|YP_306843.1| - 0.2 12.8 16.2 1.8 9.7 1.4 4.8 2 2 1 3 3 3 0 Bacterial pre-peptidase C-terminal domain Staphopain_pro PF14731.6 gi|73670828|ref|YP_306843.1| - 0.87 9.6 3.8 4.6 7.2 0.3 3.1 3 1 0 3 3 3 0 Staphopain proregion UPF0228 PF05727.11 gi|73670829|ref|YP_306844.1| - 1e-11 44.7 0.2 1.1e-11 44.6 0.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) UPF0228 PF05727.11 gi|73670830|ref|YP_306845.1| - 4.8e-06 26.4 2.1 7.5e-05 22.5 0.6 2.1 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0228) Phospholip_B PF04916.13 gi|73670830|ref|YP_306845.1| - 0.074 11.6 0.1 0.096 11.2 0.1 1.1 1 0 0 1 1 1 0 Phospholipase B NosD PF05048.13 gi|73670831|ref|YP_306846.1| - 2.7e-61 206.9 33.5 2e-54 184.4 23.7 3.2 1 1 1 3 3 3 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|73670831|ref|YP_306846.1| - 5.9e-25 88.0 77.2 7e-13 48.7 16.5 4.0 2 1 2 4 4 4 3 Right handed beta helix region Fer4_6 PF12837.7 gi|73670832|ref|YP_306847.1| - 1.2e-09 37.8 10.8 2.4e-05 24.2 3.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|73670832|ref|YP_306847.1| - 1.3e-08 34.3 15.7 9.3e-07 28.4 2.9 2.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73670832|ref|YP_306847.1| - 1.7e-07 31.7 20.9 6.9e-06 26.6 9.6 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73670832|ref|YP_306847.1| - 1.4e-06 28.0 11.2 0.00083 19.3 1.5 2.7 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73670832|ref|YP_306847.1| - 2.3e-06 28.4 12.8 8.9e-06 26.6 3.3 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|73670832|ref|YP_306847.1| - 1e-05 25.6 9.9 2.6e-05 24.3 10.0 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73670832|ref|YP_306847.1| - 6e-05 23.1 12.5 0.00043 20.3 12.6 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73670832|ref|YP_306847.1| - 0.00017 21.9 3.3 0.011 16.1 0.1 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73670832|ref|YP_306847.1| - 0.00031 20.8 10.1 0.00082 19.5 0.5 2.5 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670832|ref|YP_306847.1| - 0.00033 20.9 11.1 0.045 14.3 2.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|73670832|ref|YP_306847.1| - 0.0056 17.5 18.3 0.14 13.2 2.1 2.7 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73670832|ref|YP_306847.1| - 0.079 13.5 11.6 0.37 11.4 2.5 2.9 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73670832|ref|YP_306847.1| - 0.29 11.4 11.6 0.25 11.5 3.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73670832|ref|YP_306847.1| - 0.48 11.0 11.1 0.37 11.4 3.1 2.8 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I DUF1062 PF06353.12 gi|73670833|ref|YP_306848.1| - 0.025 15.4 0.7 0.041 14.7 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1062) HCBP_related PF06594.11 gi|73670833|ref|YP_306848.1| - 0.32 11.0 2.6 20 5.2 0.1 3.1 3 0 0 3 3 3 0 Haemolysin-type calcium binding protein related domain HD_4 PF13328.6 gi|73670834|ref|YP_306849.1| - 2.1e-12 47.0 0.0 4.8e-10 39.4 0.0 2.0 2 0 0 2 2 2 2 HD domain HD PF01966.22 gi|73670834|ref|YP_306849.1| - 0.0001 22.5 0.1 0.00026 21.2 0.1 1.6 1 1 0 1 1 1 1 HD domain DUF1648 PF07853.11 gi|73670835|ref|YP_306850.1| - 4.3e-16 58.3 0.2 4.3e-16 58.3 0.2 2.6 2 2 2 4 4 4 1 Protein of unknown function (DUF1648) DUF2157 PF09925.9 gi|73670835|ref|YP_306850.1| - 0.06 13.1 0.0 0.06 13.1 0.0 2.6 2 1 0 2 2 2 0 Predicted membrane protein (DUF2157) VKOR PF07884.14 gi|73670835|ref|YP_306850.1| - 0.39 10.9 8.6 1.7 8.8 6.3 2.2 1 1 1 2 2 2 0 Vitamin K epoxide reductase family DUF1201 PF06716.11 gi|73670835|ref|YP_306850.1| - 0.91 9.6 9.3 4.1 7.5 0.1 3.5 3 1 0 3 3 3 0 Protein of unknown function (DUF1201) PrgI PF12666.7 gi|73670835|ref|YP_306850.1| - 1.6 9.5 8.2 0.14 12.9 0.8 2.4 3 0 0 3 3 3 0 PrgI family protein Acetyltransf_3 PF13302.7 gi|73670836|ref|YP_306851.1| - 1.9e-22 80.4 0.0 2.2e-22 80.2 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73670836|ref|YP_306851.1| - 2.3e-08 34.3 0.0 2.7e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|73670836|ref|YP_306851.1| - 3.9e-08 33.6 0.1 5e-08 33.2 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|73670836|ref|YP_306851.1| - 9.2e-07 28.6 0.0 1.3e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Fz PF01392.22 gi|73670836|ref|YP_306851.1| - 0.12 13.0 3.2 0.2 12.3 3.2 1.4 1 1 0 1 1 1 0 Fz domain SpoVT_C PF15714.5 gi|73670836|ref|YP_306851.1| - 0.13 12.3 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Stage V sporulation protein T C-terminal, transcription factor RHS_repeat PF05593.14 gi|73670837|ref|YP_306852.1| - 2.7e-169 548.2 92.0 5.4e-10 39.6 1.4 30.0 15 4 17 34 34 34 31 RHS Repeat LVIVD PF08309.11 gi|73670837|ref|YP_306852.1| - 1e-137 447.2 99.9 6.1e-14 51.1 2.0 14.5 14 0 0 14 14 14 14 LVIVD repeat DUF4595 PF15283.6 gi|73670837|ref|YP_306852.1| - 1.1e-06 28.8 144.9 1.5e-05 25.2 0.5 12.4 1 1 9 10 10 10 4 Domain of unknown function (DUF4595) with porin-like fold Tk-SP_N-pro PF18237.1 gi|73670837|ref|YP_306852.1| - 1.2e-05 25.2 3.8 20 5.3 0.1 7.8 6 2 1 8 8 8 1 Tk-SP N-propeptide domain RHS PF03527.14 gi|73670837|ref|YP_306852.1| - 0.0071 16.1 0.0 3.5 7.5 0.0 4.2 2 0 0 2 2 2 1 RHS protein Tae4 PF14113.6 gi|73670837|ref|YP_306852.1| - 0.052 13.8 0.2 2.5 8.4 0.0 3.3 2 0 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 PQQ_3 PF13570.6 gi|73670837|ref|YP_306852.1| - 6 7.5 54.0 1.2 9.7 1.0 11.6 12 0 0 12 12 12 0 PQQ-like domain FpoO PF10621.9 gi|73670838|ref|YP_306853.1| - 5.2e-46 155.5 2.3 6.4e-46 155.2 2.3 1.0 1 0 0 1 1 1 1 F420H2 dehydrogenase subunit FpoO Gin PF10764.9 gi|73670838|ref|YP_306853.1| - 0.26 11.3 6.2 0.44 10.5 1.1 3.2 3 1 0 3 3 3 0 Inhibitor of sigma-G Gin Ribosomal_L28 PF00830.19 gi|73670838|ref|YP_306853.1| - 0.26 11.5 6.7 0.41 10.9 0.2 3.0 3 0 0 3 3 3 0 Ribosomal L28 family FYVE PF01363.21 gi|73670838|ref|YP_306853.1| - 0.3 11.2 8.2 4.7 7.4 8.2 2.7 1 1 0 1 1 1 0 FYVE zinc finger DUF4428 PF14471.6 gi|73670838|ref|YP_306853.1| - 4.9 7.2 11.8 3.3 7.7 2.9 3.4 2 2 0 2 2 2 0 Domain of unknown function (DUF4428) Prok-RING_4 PF14447.6 gi|73670838|ref|YP_306853.1| - 5.3 7.0 9.1 40 4.2 0.1 3.8 4 0 0 4 4 4 0 Prokaryotic RING finger family 4 Proton_antipo_M PF00361.20 gi|73670839|ref|YP_306854.1| - 1.4e-71 241.1 30.0 1.4e-71 241.1 30.0 2.3 2 0 0 2 2 2 1 Proton-conducting membrane transporter GET2 PF08690.10 gi|73670839|ref|YP_306854.1| - 0.015 15.0 1.6 0.03 14.0 1.6 1.4 1 0 0 1 1 1 0 GET complex subunit GET2 Proton_antipo_M PF00361.20 gi|73670840|ref|YP_306855.1| - 9.6e-72 241.6 28.6 9.6e-72 241.6 28.6 1.8 2 0 0 2 2 2 1 Proton-conducting membrane transporter Oxidored_q5_N PF01059.17 gi|73670840|ref|YP_306855.1| - 0.0045 17.1 1.5 0.0045 17.1 1.5 4.6 5 3 0 5 5 5 1 NADH-ubiquinone oxidoreductase chain 4, amino terminus MASE2 PF05230.11 gi|73670840|ref|YP_306855.1| - 0.045 13.8 0.1 0.045 13.8 0.1 3.4 3 0 0 3 3 3 0 MASE2 domain MaAIMP_sms PF16951.5 gi|73670840|ref|YP_306855.1| - 6.9 6.5 7.0 21 4.9 0.0 3.7 3 0 0 3 3 3 0 Putative methionine and alanine importer, small subunit Proton_antipo_M PF00361.20 gi|73670841|ref|YP_306856.1| - 7.4e-75 251.9 23.6 7.4e-75 251.9 23.6 2.7 2 1 1 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|73670841|ref|YP_306856.1| - 4.3e-16 58.7 0.5 4.3e-16 58.7 0.5 4.4 5 0 0 5 5 5 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_C PF01010.19 gi|73670841|ref|YP_306856.1| - 0.23 11.0 5.6 1.9 8.0 5.3 2.5 1 1 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Orf78 PF06024.12 gi|73670841|ref|YP_306856.1| - 7.2 7.0 9.9 20 5.5 0.0 3.4 3 0 0 3 3 3 0 Orf78 (ac78) Oxidored_q2 PF00420.24 gi|73670842|ref|YP_306857.1| - 1.2e-25 89.1 5.3 1.3e-25 89.0 5.3 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BMC PF00936.19 gi|73670842|ref|YP_306857.1| - 0.027 14.4 0.1 0.036 14.1 0.1 1.1 1 0 0 1 1 1 0 BMC domain Oxidored_q3 PF00499.20 gi|73670843|ref|YP_306858.1| - 4.3e-12 46.0 2.1 4.6e-12 45.9 2.1 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Oxidored_q3 PF00499.20 gi|73670844|ref|YP_306859.1| - 1.5e-20 73.4 12.3 1.5e-20 73.4 12.3 1.5 1 1 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF3165 PF11364.8 gi|73670844|ref|YP_306859.1| - 0.48 10.8 12.8 0.87 10.0 12.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3165) DUF4040 PF13244.6 gi|73670844|ref|YP_306859.1| - 0.71 10.1 15.5 0.32 11.2 13.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4040) SLATT_6 PF18169.1 gi|73670844|ref|YP_306859.1| - 2.6 7.6 5.3 0.79 9.3 2.7 1.5 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 GPI2 PF06432.11 gi|73670844|ref|YP_306859.1| - 2.8 7.3 9.0 3.2 7.1 9.0 1.0 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase PsbT PF01405.17 gi|73670844|ref|YP_306859.1| - 3.9 7.4 16.3 1.3 8.9 2.2 3.4 2 1 1 3 3 3 0 Photosystem II reaction centre T protein Fer4 PF00037.27 gi|73670845|ref|YP_306860.1| - 1.3e-14 53.3 12.4 4.7e-08 32.5 4.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73670845|ref|YP_306860.1| - 5.2e-12 46.2 6.8 7.7e-12 45.6 6.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73670845|ref|YP_306860.1| - 1e-11 44.8 15.8 4.9e-09 36.2 6.7 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73670845|ref|YP_306860.1| - 1e-08 36.0 6.6 0.0018 19.1 2.4 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|73670845|ref|YP_306860.1| - 2.2e-08 34.4 4.2 4.1e-08 33.6 4.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73670845|ref|YP_306860.1| - 3.7e-08 33.3 9.4 6.7e-08 32.5 9.4 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73670845|ref|YP_306860.1| - 2.8e-07 30.5 9.3 4.9e-07 29.8 9.3 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73670845|ref|YP_306860.1| - 8.7e-07 28.7 8.6 7.9e-05 22.5 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73670845|ref|YP_306860.1| - 1.2e-06 28.3 12.9 0.00015 21.7 5.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|73670845|ref|YP_306860.1| - 1e-05 26.2 3.8 0.0047 17.7 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670845|ref|YP_306860.1| - 1.2e-05 25.5 7.3 0.0028 18.0 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73670845|ref|YP_306860.1| - 1.6e-05 25.1 0.8 0.091 13.0 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73670845|ref|YP_306860.1| - 3.2e-05 24.4 7.6 0.0097 16.4 9.6 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73670845|ref|YP_306860.1| - 3.6e-05 24.4 3.8 0.011 16.5 0.6 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|73670845|ref|YP_306860.1| - 0.00046 20.9 15.7 0.0056 17.5 2.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73670845|ref|YP_306860.1| - 0.0012 19.3 10.3 0.0025 18.3 2.7 2.3 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I NADHdh PF00146.21 gi|73670846|ref|YP_306861.1| - 2.6e-99 332.3 19.5 3.1e-99 332.1 19.5 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Complex1_49kDa PF00346.19 gi|73670847|ref|YP_306862.1| - 3e-87 292.2 0.1 1.4e-85 286.7 0.1 2.0 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|73670847|ref|YP_306862.1| - 2.4e-06 26.7 0.0 3.8e-06 26.1 0.0 1.4 1 1 0 1 1 1 1 Nickel-dependent hydrogenase Complex1_30kDa PF00329.19 gi|73670848|ref|YP_306863.1| - 5.8e-39 133.5 0.0 8.7e-39 132.9 0.0 1.2 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit zf-C2H2_2 PF12756.7 gi|73670848|ref|YP_306863.1| - 0.018 15.3 0.1 0.025 14.9 0.1 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) YqbF PF14553.6 gi|73670848|ref|YP_306863.1| - 0.022 14.6 0.5 2.1 8.3 0.0 2.4 2 0 0 2 2 2 0 YqbF, hypothetical protein domain NST1 PF13945.6 gi|73670848|ref|YP_306863.1| - 0.12 12.4 0.7 0.18 11.9 0.7 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator Oxidored_q6 PF01058.22 gi|73670849|ref|YP_306864.1| - 6.3e-23 81.0 0.0 9.1e-23 80.5 0.0 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Oxidored_q4 PF00507.19 gi|73670850|ref|YP_306865.1| - 1.1e-32 112.1 3.7 1.1e-32 112.1 3.7 1.4 2 0 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Fer4 PF00037.27 gi|73670851|ref|YP_306866.1| - 5.6e-13 48.1 16.2 2.2e-06 27.2 5.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73670851|ref|YP_306866.1| - 1.3e-09 38.1 24.4 3.6e-07 30.2 13.1 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670851|ref|YP_306866.1| - 4.8e-09 36.0 13.0 9.4e-05 22.6 2.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|73670851|ref|YP_306866.1| - 9.6e-09 35.3 12.1 1.3e-08 34.8 12.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73670851|ref|YP_306866.1| - 2.2e-08 33.8 15.7 0.00018 21.4 5.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73670851|ref|YP_306866.1| - 2.7e-08 34.3 12.8 0.00048 20.7 2.6 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73670851|ref|YP_306866.1| - 1.2e-07 32.6 11.3 0.0015 19.4 1.9 2.0 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|73670851|ref|YP_306866.1| - 5.4e-07 29.3 14.3 0.0007 19.5 3.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73670851|ref|YP_306866.1| - 0.00019 21.5 24.5 0.0033 17.5 14.5 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|73670851|ref|YP_306866.1| - 0.0004 20.9 11.9 0.023 15.2 1.1 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73670851|ref|YP_306866.1| - 0.00071 20.4 18.4 0.11 13.4 4.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73670851|ref|YP_306866.1| - 0.0019 18.6 13.5 0.026 15.0 1.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|73670851|ref|YP_306866.1| - 0.012 16.2 14.4 0.14 12.7 1.8 2.7 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|73670851|ref|YP_306866.1| - 0.013 16.3 14.8 0.29 12.0 4.9 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73670851|ref|YP_306866.1| - 0.035 14.3 2.4 0.035 14.3 2.4 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|73670851|ref|YP_306866.1| - 0.28 11.9 16.5 0.23 12.2 2.6 3.0 1 1 2 3 3 3 0 4Fe-4S single cluster domain Elf1 PF05129.13 gi|73670851|ref|YP_306866.1| - 0.89 9.6 8.3 1.2 9.3 8.3 1.4 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Amino_oxidase PF01593.24 gi|73670852|ref|YP_306867.1| - 6.8e-21 75.1 0.0 9.5e-21 74.6 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|73670852|ref|YP_306867.1| - 6.3e-12 45.6 0.0 1.9e-11 44.0 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|73670852|ref|YP_306867.1| - 2.7e-08 33.4 1.3 0.0049 16.1 0.0 3.8 2 2 2 4 4 4 3 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|73670852|ref|YP_306867.1| - 1.8e-06 27.3 2.3 0.00093 18.4 0.1 2.9 3 0 0 3 3 3 2 FAD binding domain DAO PF01266.24 gi|73670852|ref|YP_306867.1| - 3.8e-06 26.7 0.2 0.016 14.8 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|73670852|ref|YP_306867.1| - 7e-06 25.0 1.4 0.009 14.8 0.3 2.2 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox PF00070.27 gi|73670852|ref|YP_306867.1| - 0.0027 18.2 1.0 0.18 12.4 0.1 3.2 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|73670852|ref|YP_306867.1| - 0.032 13.5 0.5 0.15 11.2 0.2 2.0 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.22 gi|73670852|ref|YP_306867.1| - 0.056 12.5 0.0 0.056 12.5 0.0 2.1 3 0 0 3 3 3 0 Glucose inhibited division protein A GMC_oxred_N PF00732.19 gi|73670852|ref|YP_306867.1| - 0.12 11.8 0.3 1.5 8.2 0.1 2.1 2 0 0 2 2 2 0 GMC oxidoreductase GDI PF00996.18 gi|73670852|ref|YP_306867.1| - 0.24 9.9 0.0 0.35 9.3 0.0 1.2 1 0 0 1 1 1 0 GDP dissociation inhibitor Radical_SAM PF04055.21 gi|73670853|ref|YP_306868.1| - 1.6e-13 51.4 0.0 3.6e-13 50.2 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Radical_SAM PF04055.21 gi|73670854|ref|YP_306869.1| - 1.9e-19 70.7 0.1 3.4e-19 69.8 0.1 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Fer2 PF00111.27 gi|73670854|ref|YP_306869.1| - 0.017 15.1 0.3 0.035 14.1 0.3 1.5 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 gi|73670854|ref|YP_306869.1| - 0.067 13.2 0.2 0.15 12.1 0.2 1.5 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain EFG_C PF00679.24 gi|73670854|ref|YP_306869.1| - 0.087 12.9 0.0 0.35 10.9 0.0 2.0 2 0 0 2 2 2 0 Elongation factor G C-terminus HlyD_D23 PF16576.5 gi|73670854|ref|YP_306869.1| - 0.14 11.3 0.0 0.23 10.6 0.0 1.4 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Radical_SAM PF04055.21 gi|73670855|ref|YP_306870.1| - 9.2e-20 71.7 0.1 1.3e-19 71.2 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily CofC PF01983.16 gi|73670856|ref|YP_306871.1| - 2.8e-50 170.5 0.0 3.3e-50 170.3 0.0 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|73670856|ref|YP_306871.1| - 0.00091 19.6 0.0 0.0013 19.1 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain TetR_N PF00440.23 gi|73670857|ref|YP_306872.1| - 5.7e-11 42.0 0.0 9.8e-11 41.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_3 PF08362.11 gi|73670857|ref|YP_306872.1| - 0.0032 17.4 0.3 0.0049 16.8 0.3 1.4 1 1 0 1 1 1 1 YcdC-like protein, C-terminal region DUF4304 PF14137.6 gi|73670857|ref|YP_306872.1| - 0.074 13.2 0.3 0.12 12.5 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4304) Radical_SAM PF04055.21 gi|73670858|ref|YP_306873.1| - 8.4e-18 65.3 0.8 6.8e-17 62.3 0.0 2.2 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73670858|ref|YP_306873.1| - 2.1e-06 28.0 1.5 2.9e-06 27.6 0.0 1.9 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|73670858|ref|YP_306873.1| - 9.6e-06 25.7 0.0 9.6e-06 25.7 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4 PF00037.27 gi|73670859|ref|YP_306874.1| - 1.8e-15 56.0 16.1 1e-07 31.5 2.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73670859|ref|YP_306874.1| - 5.4e-12 46.1 35.2 3.9e-07 30.5 13.3 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73670859|ref|YP_306874.1| - 1.3e-09 37.7 12.5 1.9e-05 24.5 3.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73670859|ref|YP_306874.1| - 5.6e-09 36.8 9.9 6.7e-05 23.7 0.5 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|73670859|ref|YP_306874.1| - 1.1e-08 35.1 8.4 1.5e-08 34.6 8.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73670859|ref|YP_306874.1| - 5.1e-08 33.0 21.7 1.2e-05 25.4 12.2 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73670859|ref|YP_306874.1| - 3e-07 30.4 23.2 5.8e-05 23.1 12.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73670859|ref|YP_306874.1| - 3.5e-07 29.9 12.9 0.0012 18.8 1.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|73670859|ref|YP_306874.1| - 1e-05 26.0 9.6 0.0016 19.0 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|73670859|ref|YP_306874.1| - 0.00016 22.4 12.0 0.2 12.4 0.3 3.0 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|73670859|ref|YP_306874.1| - 0.00019 22.1 19.7 0.068 14.1 7.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|73670859|ref|YP_306874.1| - 0.00076 19.9 12.9 0.12 12.8 3.1 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670859|ref|YP_306874.1| - 0.002 18.5 12.1 0.25 11.9 3.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73670859|ref|YP_306874.1| - 0.0043 17.6 12.1 0.13 12.8 2.1 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|73670859|ref|YP_306874.1| - 0.013 15.7 11.8 0.12 12.6 2.4 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Desulfoferrod_N PF06397.12 gi|73670859|ref|YP_306874.1| - 0.015 14.9 3.1 0.015 14.9 3.1 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Fer4_22 PF17179.4 gi|73670859|ref|YP_306874.1| - 0.66 10.8 14.5 0.52 11.2 2.8 2.0 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_19 PF06902.11 gi|73670859|ref|YP_306874.1| - 0.68 10.1 8.1 2.7 8.1 0.3 2.6 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster zf-CHCC PF10276.9 gi|73670859|ref|YP_306874.1| - 1.4 9.1 13.0 0.62 10.2 1.8 2.3 1 1 1 2 2 2 0 Zinc-finger domain zf-BED PF02892.15 gi|73670859|ref|YP_306874.1| - 2.1 8.4 8.2 8.2 6.5 0.8 2.1 2 0 0 2 2 2 0 BED zinc finger FAD_binding_3 PF01494.19 gi|73670860|ref|YP_306875.1| - 2.6e-20 73.0 2.7 1.3e-18 67.4 2.7 2.7 1 1 0 1 1 1 1 FAD binding domain FAD_binding_2 PF00890.24 gi|73670860|ref|YP_306875.1| - 1e-12 47.9 0.4 2e-08 33.7 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|73670860|ref|YP_306875.1| - 3.1e-11 43.4 1.5 7.1e-05 22.6 0.4 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|73670860|ref|YP_306875.1| - 6.3e-11 42.3 2.9 1.5e-10 41.0 2.9 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|73670860|ref|YP_306875.1| - 2.1e-09 36.9 0.2 2.7e-07 30.0 0.3 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein HI0933_like PF03486.14 gi|73670860|ref|YP_306875.1| - 7.3e-08 31.5 1.0 1.3e-07 30.6 0.1 1.9 3 0 0 3 3 3 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|73670860|ref|YP_306875.1| - 2.7e-07 30.7 0.1 1.3e-06 28.5 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|73670860|ref|YP_306875.1| - 4.1e-07 29.5 3.9 3.6e-06 26.4 0.1 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|73670860|ref|YP_306875.1| - 9.8e-06 24.9 0.6 2.1e-05 23.8 0.6 1.7 1 1 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|73670860|ref|YP_306875.1| - 0.0001 21.3 4.4 0.071 11.9 0.2 2.4 2 1 0 3 3 3 2 Tryptophan halogenase Thi4 PF01946.17 gi|73670860|ref|YP_306875.1| - 0.00018 20.8 0.1 0.00046 19.5 0.0 1.7 2 0 0 2 2 2 1 Thi4 family AlaDh_PNT_C PF01262.21 gi|73670860|ref|YP_306875.1| - 0.0013 18.1 0.1 0.0064 15.8 0.0 1.9 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 gi|73670860|ref|YP_306875.1| - 0.0018 17.6 0.2 0.0035 16.7 0.2 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|73670860|ref|YP_306875.1| - 0.018 14.9 0.1 0.086 12.7 0.0 2.2 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SE PF08491.10 gi|73670860|ref|YP_306875.1| - 0.075 12.1 0.1 0.16 11.0 0.1 1.5 1 0 0 1 1 1 0 Squalene epoxidase XdhC_C PF13478.6 gi|73670860|ref|YP_306875.1| - 0.14 12.7 0.3 0.38 11.2 0.0 2.1 2 1 0 2 2 1 0 XdhC Rossmann domain Pyr_redox PF00070.27 gi|73670860|ref|YP_306875.1| - 0.16 12.6 0.1 0.16 12.6 0.1 2.4 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase TrkH PF02386.16 gi|73670861|ref|YP_306876.1| - 4.7e-67 226.5 22.7 1.5e-66 224.9 22.7 1.6 1 1 0 1 1 1 1 Cation transport protein Bac_export_2 PF01312.19 gi|73670861|ref|YP_306876.1| - 5.6 6.1 14.6 0.23 10.7 2.7 2.4 2 1 0 2 2 2 0 FlhB HrpN YscU SpaS Family TrkA_N PF02254.18 gi|73670862|ref|YP_306877.1| - 1.4e-47 160.7 8.7 2e-26 92.6 0.3 2.3 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|73670862|ref|YP_306877.1| - 1e-33 114.9 4.9 5e-18 64.7 0.1 3.2 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|73670862|ref|YP_306877.1| - 4e-09 36.8 4.6 0.0011 19.3 1.2 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|73670862|ref|YP_306877.1| - 3.2e-06 27.3 3.5 0.00044 20.3 0.7 2.6 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|73670862|ref|YP_306877.1| - 3.9e-06 27.2 5.5 0.016 15.4 1.5 2.9 3 0 0 3 3 3 2 Saccharopine dehydrogenase NADP binding domain AlaDh_PNT_C PF01262.21 gi|73670862|ref|YP_306877.1| - 0.00013 21.4 3.9 0.015 14.6 3.3 2.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_10 PF13460.6 gi|73670862|ref|YP_306877.1| - 0.00035 20.5 2.5 0.0035 17.2 0.9 2.3 2 0 0 2 2 2 1 NAD(P)H-binding Castor_Poll_mid PF06241.12 gi|73670862|ref|YP_306877.1| - 0.0026 17.7 0.7 0.58 10.2 0.0 3.0 3 0 0 3 3 3 1 Castor and Pollux, part of voltage-gated ion channel ApbA PF02558.16 gi|73670862|ref|YP_306877.1| - 0.0051 16.5 0.1 2.5 7.7 0.0 2.5 2 1 0 2 2 2 2 Ketopantoate reductase PanE/ApbA NAD_binding_8 PF13450.6 gi|73670862|ref|YP_306877.1| - 0.0096 16.1 0.1 2.2 8.5 0.1 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 gi|73670862|ref|YP_306877.1| - 0.02 14.8 0.7 0.16 11.8 0.3 2.6 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF1188 PF06690.11 gi|73670862|ref|YP_306877.1| - 0.024 14.2 1.9 0.34 10.4 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1188) Pyr_redox_2 PF07992.14 gi|73670862|ref|YP_306877.1| - 0.045 13.0 3.2 0.74 9.0 0.2 2.7 2 1 1 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|73670862|ref|YP_306877.1| - 0.049 13.2 0.2 0.049 13.2 0.2 1.6 2 0 0 2 2 2 0 FAD dependent oxidoreductase NmrA PF05368.13 gi|73670862|ref|YP_306877.1| - 0.089 12.3 3.1 0.06 12.9 1.3 1.6 2 0 0 2 2 2 0 NmrA-like family Pyr_redox PF00070.27 gi|73670862|ref|YP_306877.1| - 0.093 13.3 0.3 0.093 13.3 0.3 3.4 4 2 1 5 5 3 0 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 gi|73670862|ref|YP_306877.1| - 0.11 11.9 0.4 0.71 9.2 0.3 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.21 gi|73670862|ref|YP_306877.1| - 0.14 11.6 0.3 0.38 10.2 0.3 1.7 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family FAD_binding_3 PF01494.19 gi|73670862|ref|YP_306877.1| - 0.15 11.3 0.0 0.29 10.4 0.0 1.5 1 0 0 1 1 1 0 FAD binding domain RE_BsaWI PF18643.1 gi|73670862|ref|YP_306877.1| - 0.19 11.6 1.2 32 4.5 0.1 3.4 3 0 0 3 3 3 0 BsaWI restriction endonuclease type 2 RNase_PH_C PF03725.15 gi|73670862|ref|YP_306877.1| - 3.7 7.7 6.7 5.4 7.1 0.2 3.6 3 1 1 4 4 4 0 3' exoribonuclease family, domain 2 SBP_bac_11 PF13531.6 gi|73670863|ref|YP_306878.1| - 2.6e-58 197.5 0.1 3e-58 197.3 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|73670863|ref|YP_306878.1| - 6.1e-21 75.7 0.2 8.9e-20 71.9 0.2 2.1 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Phosphonate-bd PF12974.7 gi|73670863|ref|YP_306878.1| - 1.6e-06 27.9 0.1 2.1e-06 27.5 0.1 1.2 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_6 PF13343.6 gi|73670863|ref|YP_306878.1| - 7e-06 25.6 0.0 1.5e-05 24.6 0.0 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|73670863|ref|YP_306878.1| - 3.1e-05 23.9 0.1 0.0017 18.2 0.0 2.1 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein PBP_like_2 PF12849.7 gi|73670863|ref|YP_306878.1| - 5.1e-05 23.1 1.1 0.00026 20.8 1.1 1.9 1 1 0 1 1 1 1 PBP superfamily domain OpuAC PF04069.12 gi|73670863|ref|YP_306878.1| - 6.6e-05 22.6 0.1 8.9e-05 22.2 0.1 1.2 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system HAD_2 PF13419.6 gi|73670864|ref|YP_306879.1| - 1.9e-15 57.4 0.0 4.5e-15 56.2 0.0 1.5 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|73670864|ref|YP_306879.1| - 1.2e-11 44.5 0.0 1.8e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|73670864|ref|YP_306879.1| - 3.7e-06 27.4 0.0 4.2e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 gi|73670864|ref|YP_306879.1| - 0.013 15.2 0.0 0.023 14.4 0.0 1.5 1 1 0 1 1 1 0 Polynucleotide kinase 3 phosphatase tRNA-Thr_ED PF08915.11 gi|73670864|ref|YP_306879.1| - 0.11 12.6 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Archaea-specific editing domain of threonyl-tRNA synthetase HTH_5 PF01022.20 gi|73670865|ref|YP_306880.1| - 3.1e-13 49.4 0.1 7.6e-13 48.1 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Rhodanese PF00581.20 gi|73670865|ref|YP_306880.1| - 1.7e-11 44.6 0.0 3.5e-11 43.6 0.0 1.5 1 0 0 1 1 1 1 Rhodanese-like domain HTH_20 PF12840.7 gi|73670865|ref|YP_306880.1| - 4.4e-10 39.5 0.1 9.6e-10 38.4 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|73670865|ref|YP_306880.1| - 7.7e-06 25.6 0.2 1.6e-05 24.6 0.2 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain Dimerisation2 PF16864.5 gi|73670865|ref|YP_306880.1| - 0.0011 18.9 0.1 0.0045 17.0 0.0 2.0 1 1 1 2 2 2 1 Dimerisation domain TrmB PF01978.19 gi|73670865|ref|YP_306880.1| - 0.0016 18.3 0.2 0.0038 17.1 0.2 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|73670865|ref|YP_306880.1| - 0.002 17.9 0.1 0.0038 17.1 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|73670865|ref|YP_306880.1| - 0.005 16.4 0.2 0.01 15.4 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GatB_Yqey PF02637.18 gi|73670865|ref|YP_306880.1| - 0.0092 15.9 0.7 0.12 12.2 0.0 2.5 1 1 1 3 3 3 1 GatB domain TFIIE_alpha PF02002.17 gi|73670865|ref|YP_306880.1| - 0.0097 15.8 2.1 0.018 14.9 1.3 1.9 1 1 0 1 1 1 1 TFIIE alpha subunit HTH_45 PF14947.6 gi|73670865|ref|YP_306880.1| - 0.017 15.1 0.2 0.036 14.0 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix Rrf2 PF02082.20 gi|73670865|ref|YP_306880.1| - 0.023 15.0 0.2 0.84 10.0 0.1 2.7 2 1 1 3 3 3 0 Transcriptional regulator Rio2_N PF09202.11 gi|73670865|ref|YP_306880.1| - 0.079 13.2 1.2 0.87 9.8 0.1 2.3 2 0 0 2 2 2 0 Rio2, N-terminal DsbD PF02683.15 gi|73670866|ref|YP_306881.1| - 2.1e-16 60.4 22.9 2.9e-16 60.0 22.9 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|73670866|ref|YP_306881.1| - 6.4e-09 36.0 23.7 5.6e-06 26.4 11.1 2.2 1 1 1 2 2 2 2 Cytochrome C biogenesis protein transmembrane region Kinocilin PF15033.6 gi|73670866|ref|YP_306881.1| - 0.1 12.3 1.5 0.18 11.4 0.9 1.8 1 1 0 1 1 1 0 Kinocilin protein TrkH PF02386.16 gi|73670867|ref|YP_306882.1| - 1.4e-58 198.6 21.9 2.1e-57 194.7 21.9 2.0 1 1 0 1 1 1 1 Cation transport protein TrkA_N PF02254.18 gi|73670868|ref|YP_306883.1| - 1.7e-45 154.0 3.6 2.7e-24 85.6 0.1 2.3 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|73670868|ref|YP_306883.1| - 1.1e-29 102.1 0.1 2.5e-14 52.9 0.0 2.7 2 0 0 2 2 2 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|73670868|ref|YP_306883.1| - 1.3e-07 32.0 1.5 0.00082 19.8 0.3 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|73670868|ref|YP_306883.1| - 1.4e-07 31.7 1.0 0.011 15.8 0.2 2.5 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|73670868|ref|YP_306883.1| - 3.6e-06 26.4 0.9 0.0011 18.4 0.9 2.2 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|73670868|ref|YP_306883.1| - 1.3e-05 25.5 2.8 0.096 12.9 0.6 3.0 3 0 0 3 3 3 2 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|73670868|ref|YP_306883.1| - 7.4e-05 23.3 1.2 0.045 14.3 0.2 3.3 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent DUF1188 PF06690.11 gi|73670868|ref|YP_306883.1| - 0.0014 18.2 2.4 0.1 12.1 0.3 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF1188) NAD_Gly3P_dh_N PF01210.23 gi|73670868|ref|YP_306883.1| - 0.02 14.9 0.1 0.99 9.4 0.1 2.5 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|73670868|ref|YP_306883.1| - 0.029 14.9 0.3 0.32 11.6 0.1 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|73670868|ref|YP_306883.1| - 0.034 13.7 0.6 0.052 13.1 0.0 1.6 2 0 0 2 2 2 0 FAD dependent oxidoreductase NAD_binding_10 PF13460.6 gi|73670868|ref|YP_306883.1| - 0.065 13.1 0.3 0.61 10.0 0.1 2.2 2 0 0 2 2 2 0 NAD(P)H-binding DUF4748 PF15932.5 gi|73670868|ref|YP_306883.1| - 0.088 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) Pyr_redox_2 PF07992.14 gi|73670868|ref|YP_306883.1| - 0.092 12.0 0.4 1.2 8.3 0.1 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|73670868|ref|YP_306883.1| - 0.12 12.6 0.0 26 5.1 0.0 2.4 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain DnaJ_C PF01556.18 gi|73670870|ref|YP_306885.1| - 2.7e-39 134.6 0.0 3.5e-39 134.2 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|73670870|ref|YP_306885.1| - 7.6e-29 99.6 3.8 7.6e-29 99.6 3.8 2.3 2 0 0 2 2 2 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|73670870|ref|YP_306885.1| - 1.9e-14 53.7 16.9 3.3e-14 53.0 16.9 1.4 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|73670870|ref|YP_306885.1| - 4.3e-05 23.4 17.8 0.0023 17.8 5.8 2.7 1 1 2 3 3 3 3 Tryptophan RNA-binding attenuator protein inhibitory protein Prim_Zn_Ribbon PF08273.12 gi|73670870|ref|YP_306885.1| - 0.0033 17.7 15.1 0.049 13.9 3.1 3.2 3 0 0 3 3 3 2 Zinc-binding domain of primase-helicase Ogr_Delta PF04606.12 gi|73670870|ref|YP_306885.1| - 0.22 11.5 8.9 1.3 9.1 0.2 2.8 3 0 0 3 3 3 0 Ogr/Delta-like zinc finger Lar_restr_allev PF14354.6 gi|73670870|ref|YP_306885.1| - 0.65 10.4 6.3 3.1 8.2 0.9 2.7 1 1 1 2 2 2 0 Restriction alleviation protein Lar HypA PF01155.19 gi|73670870|ref|YP_306885.1| - 0.98 9.5 10.9 1.2 9.2 1.2 2.5 2 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C3HC4_3 PF13920.6 gi|73670870|ref|YP_306885.1| - 1.3 8.9 6.7 8 6.4 0.6 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) FdhE PF04216.12 gi|73670870|ref|YP_306885.1| - 3.2 7.6 3.9 6.4 6.6 3.9 1.4 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HSP70 PF00012.20 gi|73670871|ref|YP_306886.1| - 2.5e-250 831.8 12.0 7.1e-248 823.7 12.0 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|73670871|ref|YP_306886.1| - 4.5e-18 65.2 2.4 4.5e-18 65.2 2.4 2.1 2 1 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.16 gi|73670871|ref|YP_306886.1| - 1.6e-05 24.8 0.0 4.6e-05 23.2 0.0 1.7 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FtsA PF14450.6 gi|73670871|ref|YP_306886.1| - 0.0003 21.2 6.6 0.37 11.3 0.0 3.8 3 2 0 3 3 3 2 Cell division protein FtsA BcrAD_BadFG PF01869.20 gi|73670871|ref|YP_306886.1| - 0.012 15.1 2.8 1.4 8.3 0.0 2.9 2 1 1 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family Big_3_3 PF13750.6 gi|73670871|ref|YP_306886.1| - 0.099 12.3 0.0 0.31 10.7 0.0 1.9 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) Vfa1 PF08432.10 gi|73670871|ref|YP_306886.1| - 0.18 12.1 10.7 0.28 11.5 9.9 1.6 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 Phage_connect_1 PF05135.13 gi|73670871|ref|YP_306886.1| - 0.65 10.5 8.8 3.3 8.3 1.0 3.4 3 1 0 3 3 3 0 Phage gp6-like head-tail connector protein DUF3347 PF11827.8 gi|73670871|ref|YP_306886.1| - 0.79 9.9 12.4 3.5 7.8 11.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3347) GrpE PF01025.19 gi|73670872|ref|YP_306887.1| - 4.7e-45 153.2 8.6 6.1e-45 152.9 8.6 1.2 1 0 0 1 1 1 1 GrpE Tim54 PF11711.8 gi|73670872|ref|YP_306887.1| - 0.62 8.8 7.2 0.75 8.5 7.2 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 PNISR PF15996.5 gi|73670872|ref|YP_306887.1| - 1.6 8.9 12.6 33 4.7 0.0 2.3 2 1 0 2 2 2 0 Arginine/serine-rich protein PNISR UPF0242 PF06785.11 gi|73670872|ref|YP_306887.1| - 3.3 7.8 9.4 2.6 8.1 8.1 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ATP-grasp_3 PF02655.14 gi|73670874|ref|YP_306889.1| - 9.9e-42 142.7 0.0 1.4e-41 142.3 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|73670874|ref|YP_306889.1| - 0.00026 20.3 0.0 0.026 13.8 0.0 2.1 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp preATP-grasp_3 PF18301.1 gi|73670874|ref|YP_306889.1| - 0.00033 20.9 0.0 0.0007 19.8 0.0 1.5 1 0 0 1 1 1 1 pre ATP-grasp 3 domain RimK PF08443.11 gi|73670874|ref|YP_306889.1| - 0.057 13.0 0.0 11 5.6 0.0 2.3 2 0 0 2 2 2 0 RimK-like ATP-grasp domain AIB PF15334.6 gi|73670874|ref|YP_306889.1| - 0.12 11.6 0.1 0.15 11.4 0.1 1.2 1 0 0 1 1 1 0 Aurora kinase A and ninein interacting protein Hydantoinase_A PF01968.18 gi|73670875|ref|YP_306890.1| - 1.5e-33 116.3 0.0 2.8e-32 112.1 0.0 2.0 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|73670875|ref|YP_306890.1| - 0.0003 19.5 0.0 0.0068 15.0 0.0 2.2 2 0 0 2 2 2 2 MutL protein Bac_luciferase PF00296.20 gi|73670875|ref|YP_306890.1| - 0.13 11.7 0.2 0.32 10.4 0.0 1.7 2 0 0 2 2 2 0 Luciferase-like monooxygenase AA_kinase PF00696.28 gi|73670876|ref|YP_306891.1| - 3.5e-14 53.0 0.0 2.2e-07 30.7 0.0 2.1 1 1 1 2 2 2 2 Amino acid kinase family DUF1610 PF07754.11 gi|73670877|ref|YP_306892.1| - 1.7e-11 43.8 7.0 1.1e-10 41.2 2.2 2.5 3 0 0 3 3 2 2 Domain of unknown function (DUF1610) DZR PF12773.7 gi|73670877|ref|YP_306892.1| - 0.00011 22.1 11.5 0.013 15.5 1.0 2.3 1 1 1 2 2 2 2 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|73670877|ref|YP_306892.1| - 0.00086 18.9 19.3 0.0089 15.7 4.5 3.2 2 2 0 2 2 2 1 zinc-ribbon domain zf_C2H2_10 PF18414.1 gi|73670877|ref|YP_306892.1| - 0.0013 18.2 8.4 0.0053 16.3 1.4 2.5 2 0 0 2 2 2 1 C2H2 type zinc-finger DUF2039 PF10217.9 gi|73670877|ref|YP_306892.1| - 0.012 16.0 3.5 0.012 16.0 3.5 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2039) tRNA-synt_1g PF09334.11 gi|73670877|ref|YP_306892.1| - 0.015 14.0 3.8 0.017 13.9 3.8 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-ribbon_3 PF13248.6 gi|73670877|ref|YP_306892.1| - 0.016 14.6 17.1 0.49 9.9 0.4 3.6 3 1 0 3 3 3 0 zinc-ribbon domain HypA PF01155.19 gi|73670877|ref|YP_306892.1| - 0.017 15.1 11.3 0.046 13.7 0.7 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 gi|73670877|ref|YP_306892.1| - 0.019 14.9 10.9 0.028 14.3 6.6 2.0 1 1 2 3 3 3 0 Putative transposase DNA-binding domain Auto_anti-p27 PF06677.12 gi|73670877|ref|YP_306892.1| - 0.044 13.9 1.9 0.044 13.9 1.9 2.5 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) C1_2 PF03107.16 gi|73670877|ref|YP_306892.1| - 0.048 14.0 2.8 0.048 14.0 2.8 2.2 1 1 1 2 2 2 0 C1 domain zinc-ribbons_6 PF07191.12 gi|73670877|ref|YP_306892.1| - 0.055 13.5 9.3 0.45 10.5 9.2 2.1 1 1 0 1 1 1 0 zinc-ribbons Rhodanese_C PF12368.8 gi|73670877|ref|YP_306892.1| - 0.065 13.6 7.0 0.074 13.4 7.0 1.1 1 0 0 1 1 1 0 Rhodanase C-terminal zf-C4_Topoisom PF01396.19 gi|73670877|ref|YP_306892.1| - 0.091 12.6 13.6 2.2 8.1 0.6 3.6 2 1 2 4 4 4 0 Topoisomerase DNA binding C4 zinc finger Zn_Tnp_IS91 PF14319.6 gi|73670877|ref|YP_306892.1| - 0.099 12.7 9.8 0.19 11.8 9.8 1.6 1 1 0 1 1 1 0 Transposase zinc-binding domain zf-C2HC5 PF06221.13 gi|73670877|ref|YP_306892.1| - 0.15 12.1 10.4 0.19 11.7 2.7 2.2 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type zf-Mss51 PF13824.6 gi|73670877|ref|YP_306892.1| - 0.15 12.2 12.7 1 9.5 4.1 2.7 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-CHY PF05495.12 gi|73670877|ref|YP_306892.1| - 0.16 12.5 11.3 0.43 11.1 6.4 2.1 1 1 1 2 2 2 0 CHY zinc finger NRDD PF13597.6 gi|73670877|ref|YP_306892.1| - 0.17 10.6 12.5 0.29 9.9 1.2 2.0 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase zf_UBZ PF18439.1 gi|73670877|ref|YP_306892.1| - 0.26 10.9 12.5 0.5 10.0 0.3 3.4 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger Zn_ribbon_SprT PF17283.2 gi|73670877|ref|YP_306892.1| - 0.29 11.1 19.0 1.7 8.7 1.2 4.0 3 1 0 3 3 3 0 SprT-like zinc ribbon domain DNA_ligase_ZBD PF03119.16 gi|73670877|ref|YP_306892.1| - 0.34 11.0 11.1 0.7 10.0 0.8 3.4 3 1 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain Nudix_N_2 PF14803.6 gi|73670877|ref|YP_306892.1| - 0.36 10.8 14.7 4.6 7.3 0.4 3.8 3 1 1 4 4 4 0 Nudix N-terminal zf-HIT PF04438.16 gi|73670877|ref|YP_306892.1| - 0.36 10.7 16.4 0.33 10.9 6.1 2.9 2 1 0 2 2 2 0 HIT zinc finger zf-RRN7 PF11781.8 gi|73670877|ref|YP_306892.1| - 0.38 10.5 0.2 0.38 10.5 0.2 3.7 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DNA_RNApol_7kD PF03604.13 gi|73670877|ref|YP_306892.1| - 0.38 10.5 14.0 3.1 7.5 0.2 3.8 3 1 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zf-HYPF PF07503.12 gi|73670877|ref|YP_306892.1| - 0.39 10.5 11.8 5.3 6.9 0.1 2.6 2 1 0 2 2 2 0 HypF finger zf-RING_7 PF02591.15 gi|73670877|ref|YP_306892.1| - 0.42 10.9 16.0 11 6.3 0.2 3.8 3 1 0 3 3 3 0 C4-type zinc ribbon domain zf-C3HC4_4 PF15227.6 gi|73670877|ref|YP_306892.1| - 0.48 10.6 9.8 0.26 11.5 1.1 2.2 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING PhnA_Zn_Ribbon PF08274.12 gi|73670877|ref|YP_306892.1| - 0.66 10.0 12.6 0.12 12.4 7.0 2.5 2 1 0 2 2 1 0 PhnA Zinc-Ribbon zf-TFIIB PF13453.6 gi|73670877|ref|YP_306892.1| - 0.7 9.3 13.9 12 5.3 0.1 3.1 2 1 0 2 2 2 0 Transcription factor zinc-finger zf-UBP PF02148.19 gi|73670877|ref|YP_306892.1| - 0.86 10.0 7.4 0.22 11.9 1.5 2.2 2 1 1 3 3 3 0 Zn-finger in ubiquitin-hydrolases and other protein PolC_DP2 PF03833.13 gi|73670877|ref|YP_306892.1| - 0.9 7.3 6.0 0.93 7.3 6.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-C3HC4 PF00097.25 gi|73670877|ref|YP_306892.1| - 0.99 9.3 11.8 0.25 11.3 1.8 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) C1_1 PF00130.22 gi|73670877|ref|YP_306892.1| - 1.3 9.0 9.7 0.24 11.3 0.7 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-tcix PF14952.6 gi|73670877|ref|YP_306892.1| - 1.5 8.5 19.5 8 6.2 1.5 3.1 2 1 1 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding RNA_POL_M_15KD PF02150.16 gi|73670877|ref|YP_306892.1| - 1.7 8.6 15.1 6.5 6.7 4.3 3.4 2 2 1 3 3 3 0 RNA polymerases M/15 Kd subunit YhfH PF14149.6 gi|73670877|ref|YP_306892.1| - 2.1 8.4 13.2 23 5.1 0.1 3.4 3 1 0 3 3 3 0 YhfH-like protein Zn-ribbon_8 PF09723.10 gi|73670877|ref|YP_306892.1| - 2.3 8.4 17.5 18 5.6 6.3 3.5 1 1 2 3 3 3 0 Zinc ribbon domain CpXC PF14353.6 gi|73670877|ref|YP_306892.1| - 2.6 8.1 10.7 4.3e+02 1.0 9.2 2.6 1 1 0 1 1 1 0 CpXC protein Rubredoxin_2 PF18073.1 gi|73670877|ref|YP_306892.1| - 2.7 7.8 19.8 2.5 7.9 0.2 4.0 3 1 0 3 3 3 0 Rubredoxin metal binding domain zinc_ribbon_10 PF10058.9 gi|73670877|ref|YP_306892.1| - 3.3 7.5 15.1 4.5 7.1 2.6 3.3 1 1 2 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-ACC PF17848.1 gi|73670877|ref|YP_306892.1| - 5.5 7.2 18.2 17 5.6 0.3 3.9 3 1 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain zinc_ribbon_9 PF14369.6 gi|73670877|ref|YP_306892.1| - 6.3 7.2 13.1 20 5.5 1.9 3.2 2 2 0 2 2 2 0 zinc-ribbon TFIIS_C PF01096.18 gi|73670877|ref|YP_306892.1| - 6.7 6.7 15.4 5.2 7.0 0.9 3.8 3 1 1 4 4 4 0 Transcription factor S-II (TFIIS) EF1_GNE PF00736.19 gi|73670878|ref|YP_306893.1| - 4.4e-21 74.8 0.4 4.9e-21 74.7 0.4 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain Radical_SAM PF04055.21 gi|73670879|ref|YP_306894.1| - 2e-07 31.5 0.0 1e-06 29.2 0.0 2.2 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|73670879|ref|YP_306894.1| - 2.5e-07 30.8 0.0 5.1e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|73670879|ref|YP_306894.1| - 0.00011 22.4 0.0 0.0003 21.1 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|73670879|ref|YP_306894.1| - 0.0069 16.9 0.0 0.017 15.7 0.0 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain TetR_N PF00440.23 gi|73670880|ref|YP_306895.1| - 1e-12 47.6 0.0 1.7e-12 46.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Wzt_C PF14524.6 gi|73670881|ref|YP_306896.1| - 0.11 12.6 0.3 0.64 10.1 0.1 2.4 2 0 0 2 2 2 0 Wzt C-terminal domain FdtA PF05523.11 gi|73670881|ref|YP_306896.1| - 0.12 12.1 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 WxcM-like, C-terminal MacB_PCD PF12704.7 gi|73670882|ref|YP_306897.1| - 2.8e-14 53.9 0.6 2.8e-14 53.9 0.6 2.2 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|73670882|ref|YP_306897.1| - 2.6e-09 37.4 7.7 2.6e-09 37.4 7.7 2.7 3 0 0 3 3 3 1 FtsX-like permease family MacB_PCD PF12704.7 gi|73670883|ref|YP_306898.1| - 3.6e-16 60.1 0.5 6.4e-16 59.3 0.5 1.4 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|73670883|ref|YP_306898.1| - 8.1e-15 55.1 4.5 8.1e-15 55.1 4.5 2.9 3 0 0 3 3 3 1 FtsX-like permease family PSD4 PF07631.11 gi|73670883|ref|YP_306898.1| - 0.18 12.4 0.0 0.28 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1592) Deltameth_res PF16020.5 gi|73670883|ref|YP_306898.1| - 1.7 8.6 3.6 1.5 8.8 0.2 2.4 2 0 0 2 2 2 0 Deltamethrin resistance ABC_tran PF00005.27 gi|73670884|ref|YP_306899.1| - 9.2e-34 116.9 0.0 1.2e-33 116.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|73670884|ref|YP_306899.1| - 7.3e-11 41.9 0.3 3.7e-09 36.4 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73670884|ref|YP_306899.1| - 9.3e-06 25.7 0.0 0.0024 17.7 0.1 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|73670884|ref|YP_306899.1| - 2.3e-05 24.3 0.0 0.00024 21.0 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|73670884|ref|YP_306899.1| - 3.1e-05 23.6 0.1 5.7e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|73670884|ref|YP_306899.1| - 0.00014 21.5 0.0 0.019 14.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|73670884|ref|YP_306899.1| - 0.00055 20.5 0.8 0.0015 19.1 0.8 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|73670884|ref|YP_306899.1| - 0.00058 20.3 0.0 0.001 19.5 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|73670884|ref|YP_306899.1| - 0.00072 19.9 0.1 0.0034 17.7 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.7 gi|73670884|ref|YP_306899.1| - 0.00086 18.3 0.0 0.0037 16.3 0.0 1.8 2 0 0 2 2 2 1 AAA-like domain IstB_IS21 PF01695.17 gi|73670884|ref|YP_306899.1| - 0.0044 16.8 0.0 0.32 10.7 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein RsgA_GTPase PF03193.16 gi|73670884|ref|YP_306899.1| - 0.0072 16.2 0.2 0.015 15.2 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase DUF87 PF01935.17 gi|73670884|ref|YP_306899.1| - 0.0082 16.3 0.9 0.014 15.5 0.2 1.7 2 1 0 2 2 2 1 Helicase HerA, central domain AAA_24 PF13479.6 gi|73670884|ref|YP_306899.1| - 0.014 15.1 0.0 0.026 14.2 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 gi|73670884|ref|YP_306899.1| - 0.029 13.0 0.0 4 5.9 0.0 2.0 1 1 1 2 2 2 0 AAA domain RNA12 PF10443.9 gi|73670884|ref|YP_306899.1| - 0.046 12.5 0.1 0.14 10.8 0.0 1.7 2 0 0 2 2 2 0 RNA12 protein AAA PF00004.29 gi|73670884|ref|YP_306899.1| - 0.048 14.1 0.1 8.9 6.7 0.0 2.5 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|73670884|ref|YP_306899.1| - 0.05 13.8 0.1 0.11 12.6 0.1 1.6 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|73670884|ref|YP_306899.1| - 0.056 13.5 0.2 0.18 11.9 0.2 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase NB-ARC PF00931.22 gi|73670884|ref|YP_306899.1| - 0.057 12.6 0.1 0.12 11.5 0.1 1.5 1 0 0 1 1 1 0 NB-ARC domain AAA_30 PF13604.6 gi|73670884|ref|YP_306899.1| - 0.063 13.0 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|73670884|ref|YP_306899.1| - 0.097 12.6 0.0 0.21 11.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ATPase PF06745.13 gi|73670884|ref|YP_306899.1| - 0.1 11.9 0.2 4 6.7 0.0 2.3 2 0 0 2 2 2 0 KaiC AAA_18 PF13238.6 gi|73670884|ref|YP_306899.1| - 0.12 13.0 0.5 0.29 11.7 0.1 1.8 2 1 0 2 2 1 0 AAA domain RNA_helicase PF00910.22 gi|73670884|ref|YP_306899.1| - 0.12 12.8 0.0 0.36 11.3 0.0 1.9 2 0 0 2 2 2 0 RNA helicase Cytidylate_kin PF02224.18 gi|73670884|ref|YP_306899.1| - 0.38 10.5 1.7 0.4 10.4 0.1 1.8 3 0 0 3 3 3 0 Cytidylate kinase PAS_3 PF08447.12 gi|73670885|ref|YP_306900.1| - 7.7e-89 292.1 20.5 1.1e-23 83.3 0.1 6.4 6 0 0 6 6 6 5 PAS fold PAS_9 PF13426.7 gi|73670885|ref|YP_306900.1| - 4.3e-38 129.7 2.2 3.5e-08 33.6 0.0 6.9 6 0 0 6 6 6 5 PAS domain HisKA_2 PF07568.12 gi|73670885|ref|YP_306900.1| - 1.4e-31 108.4 4.3 1.4e-31 108.4 4.3 3.5 3 1 1 4 4 3 1 Histidine kinase PAS PF00989.25 gi|73670885|ref|YP_306900.1| - 9.4e-26 90.0 3.0 3.9e-10 39.7 0.0 6.5 7 1 0 7 7 7 4 PAS fold PAS_4 PF08448.10 gi|73670885|ref|YP_306900.1| - 3.1e-17 62.8 0.0 7.3e-11 42.3 0.0 5.2 5 1 0 5 5 5 2 PAS fold PAS_11 PF14598.6 gi|73670885|ref|YP_306900.1| - 1.1e-09 38.4 0.2 0.024 14.7 0.0 4.9 4 0 0 4 4 4 2 PAS domain HATPase_c PF02518.26 gi|73670885|ref|YP_306900.1| - 2.9e-08 34.2 0.7 9.6e-08 32.5 0.1 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|73670885|ref|YP_306900.1| - 2e-05 25.2 0.6 7.2e-05 23.4 0.6 2.1 1 0 0 1 1 1 1 HWE histidine kinase PAS_8 PF13188.7 gi|73670885|ref|YP_306900.1| - 9.7e-05 22.3 0.0 0.027 14.5 0.0 4.0 4 0 0 4 4 4 1 PAS domain Nit_Regul_Hom PF10126.9 gi|73670885|ref|YP_306900.1| - 0.027 14.5 2.0 0.87 9.6 0.0 4.2 4 1 0 4 4 4 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII RVT_thumb PF06817.14 gi|73670885|ref|YP_306900.1| - 0.047 13.5 0.0 1.4 8.8 0.0 3.0 2 0 0 2 2 2 0 Reverse transcriptase thumb domain HATPase_c_2 PF13581.6 gi|73670885|ref|YP_306900.1| - 0.054 13.5 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain GAF_2 PF13185.6 gi|73670885|ref|YP_306900.1| - 0.076 13.3 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 GAF domain GAF_3 PF13492.6 gi|73670885|ref|YP_306900.1| - 0.13 12.6 0.0 0.35 11.2 0.0 1.8 1 0 0 1 1 1 0 GAF domain PAP_PilO PF06864.12 gi|73670885|ref|YP_306900.1| - 0.17 10.7 0.8 26 3.5 0.1 3.0 3 0 0 3 3 3 0 Pilin accessory protein (PilO) DUF987 PF06174.11 gi|73670885|ref|YP_306900.1| - 0.21 11.5 0.9 9.2 6.3 0.1 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF987) ZYG-11_interact PF05884.12 gi|73670885|ref|YP_306900.1| - 0.48 9.8 2.2 15 4.9 0.3 2.2 2 0 0 2 2 2 0 Interactor of ZYG-11 STN1_2 PF09170.10 gi|73670885|ref|YP_306900.1| - 4.2 7.6 8.6 32 4.7 0.2 3.5 2 1 1 3 3 3 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 YcgL PF05166.13 gi|73670885|ref|YP_306900.1| - 5.4 7.4 5.3 4.7 7.6 0.1 3.5 4 0 0 4 4 4 0 YcgL domain Response_reg PF00072.24 gi|73670886|ref|YP_306901.1| - 1.4e-23 83.2 0.1 1.7e-23 82.9 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Rhodanese PF00581.20 gi|73670887|ref|YP_306902.1| - 2.4e-20 73.1 0.0 3.3e-20 72.6 0.0 1.2 1 0 0 1 1 1 1 Rhodanese-like domain Herpes_glycop PF01528.16 gi|73670888|ref|YP_306903.1| - 1.4 7.7 7.9 1.9 7.2 7.9 1.3 1 0 0 1 1 1 0 Herpesvirus glycoprotein M zinc_ribbon_2 PF13240.6 gi|73670889|ref|YP_306904.1| - 1e-05 25.1 1.0 1.6e-05 24.5 1.0 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|73670889|ref|YP_306904.1| - 0.0024 17.9 1.2 0.0036 17.3 1.2 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-C3HC4_2 PF13923.6 gi|73670889|ref|YP_306904.1| - 0.0027 17.5 0.9 0.0041 16.9 0.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.6 gi|73670889|ref|YP_306904.1| - 0.0064 15.9 2.7 0.02 14.3 2.7 1.8 1 1 0 1 1 1 1 zinc-ribbon domain DUF35_N PF12172.8 gi|73670889|ref|YP_306904.1| - 0.012 15.4 0.2 0.02 14.8 0.2 1.2 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_15 PF17032.5 gi|73670889|ref|YP_306904.1| - 0.037 14.8 1.1 0.063 14.0 1.1 1.4 1 0 0 1 1 1 0 zinc-ribbon family DUF1272 PF06906.11 gi|73670889|ref|YP_306904.1| - 0.056 13.5 0.9 0.079 13.1 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) zf-RING_2 PF13639.6 gi|73670889|ref|YP_306904.1| - 0.076 13.4 0.3 0.11 12.9 0.3 1.2 1 0 0 1 1 1 0 Ring finger domain HypA PF01155.19 gi|73670889|ref|YP_306904.1| - 0.077 13.0 1.0 0.1 12.6 1.0 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1595 PF12760.7 gi|73670889|ref|YP_306904.1| - 0.11 12.4 0.1 0.11 12.4 0.1 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Prok-RING_1 PF14446.6 gi|73670889|ref|YP_306904.1| - 0.14 12.1 1.4 0.2 11.6 1.4 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 TackOD1 PF18551.1 gi|73670889|ref|YP_306904.1| - 0.14 11.8 0.4 0.19 11.4 0.4 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 TM2 PF05154.16 gi|73670889|ref|YP_306904.1| - 0.16 12.3 8.9 0.96 9.8 8.9 2.0 1 1 0 1 1 1 0 TM2 domain zf-C3HC4 PF00097.25 gi|73670889|ref|YP_306904.1| - 0.16 11.8 1.3 0.25 11.3 1.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF1610 PF07754.11 gi|73670889|ref|YP_306904.1| - 0.17 11.9 3.7 1 9.4 3.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF1610) TF_Zn_Ribbon PF08271.12 gi|73670889|ref|YP_306904.1| - 0.65 9.6 4.7 5.1 6.7 0.1 2.2 1 1 2 3 3 2 0 TFIIB zinc-binding Nudix_N_2 PF14803.6 gi|73670889|ref|YP_306904.1| - 1.4 8.9 4.4 45 4.1 4.4 2.1 1 1 1 2 2 2 0 Nudix N-terminal tRNA-synt_His PF13393.6 gi|73670890|ref|YP_306905.1| - 1e-60 205.7 0.0 1.3e-60 205.3 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|73670890|ref|YP_306905.1| - 6e-16 58.9 0.0 1e-15 58.2 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|73670890|ref|YP_306905.1| - 1.5e-11 44.3 0.0 2.7e-11 43.5 0.0 1.4 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2 PF00152.20 gi|73670890|ref|YP_306905.1| - 0.00058 19.0 3.0 0.73 8.9 0.1 2.9 2 1 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 gi|73670890|ref|YP_306905.1| - 0.054 13.0 0.0 0.26 10.7 0.0 1.9 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) BMC PF00936.19 gi|73670890|ref|YP_306905.1| - 0.14 12.2 0.3 0.31 11.0 0.3 1.5 1 0 0 1 1 1 0 BMC domain Aminotran_1_2 PF00155.21 gi|73670891|ref|YP_306906.1| - 8.6e-47 160.1 0.0 1e-46 159.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II zf-like PF04071.12 gi|73670891|ref|YP_306906.1| - 5.5e-26 90.3 7.5 1.1e-25 89.3 7.5 1.5 1 0 0 1 1 1 1 Cysteine-rich small domain Aminotran_5 PF00266.19 gi|73670891|ref|YP_306906.1| - 0.00064 18.8 0.0 0.002 17.2 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|73670891|ref|YP_306906.1| - 0.0072 14.9 0.0 0.01 14.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme CobD_Cbib PF03186.13 gi|73670892|ref|YP_306907.1| - 2.3e-87 292.7 1.0 2.7e-87 292.5 0.7 1.2 1 1 0 1 1 1 1 CobD/Cbib protein XFP PF03894.15 gi|73670892|ref|YP_306907.1| - 0.014 15.1 0.0 0.022 14.5 0.0 1.2 1 0 0 1 1 1 0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DUF5455 PF17537.2 gi|73670892|ref|YP_306907.1| - 1.8 9.0 7.1 0.47 10.9 1.1 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5455) PgpA PF04608.13 gi|73670893|ref|YP_306908.1| - 4.6e-10 39.7 0.0 5.9e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A CobS PF02654.15 gi|73670894|ref|YP_306909.1| - 2.1e-37 129.3 10.5 2.5e-37 129.1 10.5 1.1 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase PsbX PF06596.11 gi|73670894|ref|YP_306909.1| - 5.8 7.0 10.2 0.98 9.5 0.2 3.1 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) NTP_transf_3 PF12804.7 gi|73670895|ref|YP_306910.1| - 8.1e-16 58.8 0.0 1.2e-15 58.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|73670895|ref|YP_306910.1| - 8.8e-09 35.6 0.0 2.5e-08 34.1 0.0 1.6 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.19 gi|73670895|ref|YP_306910.1| - 5.2e-08 32.9 0.0 7.6e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CofC PF01983.16 gi|73670895|ref|YP_306910.1| - 0.002 17.4 0.4 0.0039 16.4 0.4 1.7 1 1 0 1 1 1 1 Guanylyl transferase CofC like NTP_transferase PF00483.23 gi|73670895|ref|YP_306910.1| - 0.0023 17.6 0.0 0.0028 17.3 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase DUF2064 PF09837.9 gi|73670895|ref|YP_306910.1| - 0.056 13.3 0.0 0.078 12.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2064) ABC_tran PF00005.27 gi|73670896|ref|YP_306911.1| - 1.1e-24 87.5 0.0 1.4e-24 87.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|73670896|ref|YP_306911.1| - 1.9e-11 43.8 0.4 5.8e-10 39.0 0.4 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73670896|ref|YP_306911.1| - 4.2e-11 43.2 0.2 9e-05 22.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|73670896|ref|YP_306911.1| - 0.0057 16.4 0.4 0.013 15.2 0.1 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|73670896|ref|YP_306911.1| - 0.011 16.0 0.1 0.035 14.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|73670896|ref|YP_306911.1| - 0.021 14.4 0.0 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|73670896|ref|YP_306911.1| - 0.032 14.7 0.3 0.04 14.4 0.3 1.5 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|73670896|ref|YP_306911.1| - 0.056 13.1 0.0 0.073 12.8 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 gi|73670896|ref|YP_306911.1| - 0.066 13.4 0.1 0.1 12.7 0.1 1.7 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|73670896|ref|YP_306911.1| - 0.084 12.0 0.1 6.2 5.9 0.1 2.1 2 0 0 2 2 2 0 NB-ARC domain AAA_13 PF13166.6 gi|73670896|ref|YP_306911.1| - 0.095 11.3 0.3 0.22 10.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|73670896|ref|YP_306911.1| - 0.12 12.4 0.0 0.38 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|73670896|ref|YP_306911.1| - 0.12 12.6 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|73670896|ref|YP_306911.1| - 0.14 11.9 0.0 0.73 9.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain UPF0051 PF01458.17 gi|73670897|ref|YP_306912.1| - 8.4e-37 127.0 0.4 1.1e-36 126.6 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) PKD PF00801.20 gi|73670899|ref|YP_306914.1| - 3.4e-151 491.4 102.4 2.6e-14 52.8 2.7 12.8 12 0 0 12 12 12 12 PKD domain Lactonase PF10282.9 gi|73670899|ref|YP_306914.1| - 1.6e-28 99.9 19.5 1.7e-08 34.1 1.1 7.4 2 2 5 7 7 7 7 Lactonase, 7-bladed beta-propeller PKD_3 PF16820.5 gi|73670899|ref|YP_306914.1| - 3.4e-28 97.2 41.7 0.053 13.3 0.1 12.4 12 0 0 12 12 12 10 PKD-like domain Cytochrom_D1 PF02239.16 gi|73670899|ref|YP_306914.1| - 4.9e-22 78.0 17.6 1.3e-07 30.6 0.6 5.9 2 2 3 6 6 6 6 Cytochrome D1 heme domain NHL PF01436.21 gi|73670899|ref|YP_306914.1| - 4.7e-18 64.2 27.4 0.0032 17.4 0.3 12.6 13 0 0 13 13 12 4 NHL repeat Arylesterase PF01731.20 gi|73670899|ref|YP_306914.1| - 2.6e-13 50.0 28.9 0.72 10.1 0.1 12.0 3 2 9 12 12 12 5 Arylesterase SGL PF08450.12 gi|73670899|ref|YP_306914.1| - 1.3e-11 44.6 25.0 0.0045 16.6 0.8 7.7 3 2 4 7 7 7 5 SMP-30/Gluconolactonase/LRE-like region ChitinaseA_N PF08329.10 gi|73670899|ref|YP_306914.1| - 7.2e-09 35.4 24.5 3.8 7.1 0.0 12.2 12 1 1 13 13 13 1 Chitinase A, N-terminal domain MG2 PF01835.19 gi|73670899|ref|YP_306914.1| - 1e-08 35.5 39.2 1.6 9.2 0.1 11.8 8 4 5 13 13 13 4 MG2 domain PD40 PF07676.12 gi|73670899|ref|YP_306914.1| - 1.1e-07 31.6 0.0 2.5 8.2 0.0 7.8 8 0 0 8 8 8 1 WD40-like Beta Propeller Repeat DUF4221 PF13970.6 gi|73670899|ref|YP_306914.1| - 1.9e-07 31.0 0.0 0.46 10.0 0.0 5.6 2 2 2 5 5 5 1 Domain of unknown function (DUF4221) SBP56 PF05694.11 gi|73670899|ref|YP_306914.1| - 4.4e-06 25.8 0.6 16 4.2 0.0 7.0 3 2 4 7 7 7 0 56kDa selenium binding protein (SBP56) ANAPC4_WD40 PF12894.7 gi|73670899|ref|YP_306914.1| - 0.0018 18.6 5.2 2.1 8.7 0.0 6.5 2 2 5 7 7 7 1 Anaphase-promoting complex subunit 4 WD40 domain Arm-DNA-bind_3 PF13356.6 gi|73670899|ref|YP_306914.1| - 0.0029 17.9 0.9 1.3e+02 3.0 0.1 7.2 4 3 0 4 4 4 0 Arm DNA-binding domain DUF5128 PF17170.4 gi|73670899|ref|YP_306914.1| - 0.18 10.9 0.4 17 4.5 0.1 3.1 2 1 0 2 2 2 0 6-bladed beta-propeller PCC_BT PF18140.1 gi|73670899|ref|YP_306914.1| - 1.8 8.9 21.7 8.6 6.7 0.2 6.6 4 2 3 7 7 6 0 Propionyl-coenzyme A carboxylase BT domain PQQ PF01011.21 gi|73670899|ref|YP_306914.1| - 1.9 8.6 24.5 3.5 7.7 0.0 7.9 9 0 0 9 9 8 0 PQQ enzyme repeat Biotin_carb_N PF00289.22 gi|73670899|ref|YP_306914.1| - 9.2 6.9 6.9 13 6.4 0.1 4.1 3 2 0 3 3 3 0 Biotin carboxylase, N-terminal domain DUF5591 PF17884.1 gi|73670900|ref|YP_306915.1| - 1.8e-19 70.1 0.2 2.5e-19 69.7 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) Aminotran_1_2 PF00155.21 gi|73670901|ref|YP_306916.1| - 1e-61 209.2 0.0 1.1e-61 209.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|73670901|ref|YP_306916.1| - 3.7e-10 39.7 0.2 5.1e-10 39.2 0.2 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|73670901|ref|YP_306916.1| - 5.5e-07 28.9 0.0 8.6e-07 28.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|73670901|ref|YP_306916.1| - 0.0053 15.3 0.1 0.0079 14.8 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|73670901|ref|YP_306916.1| - 0.14 11.4 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase OKR_DC_1 PF01276.20 gi|73670901|ref|YP_306916.1| - 0.15 10.7 0.0 0.21 10.3 0.0 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain AsnC_trans_reg PF01037.21 gi|73670902|ref|YP_306917.1| - 7.8e-16 57.8 0.1 1.7e-15 56.7 0.1 1.6 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|73670902|ref|YP_306917.1| - 1.2e-10 40.8 0.1 3.9e-10 39.1 0.2 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|73670902|ref|YP_306917.1| - 1.5e-09 37.5 0.7 3.1e-09 36.5 0.2 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|73670902|ref|YP_306917.1| - 2.2e-05 24.4 0.1 8.6e-05 22.4 0.1 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|73670902|ref|YP_306917.1| - 2.4e-05 24.3 0.0 4e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|73670902|ref|YP_306917.1| - 5.5e-05 23.0 0.0 0.0001 22.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|73670902|ref|YP_306917.1| - 7.8e-05 22.5 0.1 0.00026 20.9 0.1 1.9 1 1 0 1 1 1 1 HTH domain MarR PF01047.22 gi|73670902|ref|YP_306917.1| - 0.0015 18.4 0.1 0.0029 17.5 0.1 1.5 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|73670902|ref|YP_306917.1| - 0.0034 17.6 0.1 0.0085 16.3 0.1 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TFIIE_alpha PF02002.17 gi|73670902|ref|YP_306917.1| - 0.0054 16.6 0.3 0.0093 15.8 0.3 1.4 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_27 PF13463.6 gi|73670902|ref|YP_306917.1| - 0.024 15.1 0.1 0.067 13.7 0.1 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF4423 PF14394.6 gi|73670902|ref|YP_306917.1| - 0.025 14.3 0.0 0.054 13.2 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) DUF2250 PF10007.9 gi|73670902|ref|YP_306917.1| - 0.037 14.1 0.1 0.066 13.3 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DprA_WH PF17782.1 gi|73670902|ref|YP_306917.1| - 0.039 14.1 0.0 0.063 13.4 0.0 1.4 1 0 0 1 1 1 0 DprA winged helix domain Rrf2 PF02082.20 gi|73670902|ref|YP_306917.1| - 0.054 13.8 0.1 0.25 11.7 0.1 2.1 2 0 0 2 2 2 0 Transcriptional regulator HTH_5 PF01022.20 gi|73670902|ref|YP_306917.1| - 0.066 13.1 0.0 0.099 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family RPA_C PF08784.11 gi|73670902|ref|YP_306917.1| - 0.087 13.5 0.0 0.22 12.2 0.0 1.7 1 0 0 1 1 1 0 Replication protein A C terminal DUF2513 PF10711.9 gi|73670902|ref|YP_306917.1| - 0.16 12.2 0.6 0.39 11.0 0.2 1.8 2 0 0 2 2 2 0 Hypothetical protein (DUF2513) Ribosomal_S8e PF01201.22 gi|73670903|ref|YP_306918.1| - 1.6e-34 119.0 3.7 1.9e-34 118.8 3.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S8e DUF5075 PF16825.5 gi|73670904|ref|YP_306919.1| - 0.13 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 IGP family C-type lectin domain DUF169 PF02596.15 gi|73670905|ref|YP_306920.1| - 1.3e-62 211.4 0.1 1.4e-62 211.3 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 FMN_red PF03358.15 gi|73670906|ref|YP_306921.1| - 1.7e-22 79.9 0.2 2.1e-22 79.6 0.2 1.3 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|73670906|ref|YP_306921.1| - 1.3e-17 64.1 0.0 1.6e-17 63.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Mac PF12464.8 gi|73670907|ref|YP_306922.1| - 2.1e-17 63.1 0.0 3.1e-17 62.6 0.0 1.3 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep PF00132.24 gi|73670907|ref|YP_306922.1| - 1.1e-12 47.2 12.9 1.2e-09 37.5 5.8 3.4 2 1 1 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|73670907|ref|YP_306922.1| - 1.3e-10 40.9 12.1 4.6e-08 32.7 5.1 3.0 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase PIN_6 PF17146.4 gi|73670908|ref|YP_306923.1| - 7.4e-14 52.0 0.0 1.2e-13 51.4 0.0 1.3 1 0 0 1 1 1 1 PIN domain of ribonuclease zinc-ribbons_6 PF07191.12 gi|73670908|ref|YP_306923.1| - 0.0014 18.5 0.3 0.0025 17.7 0.3 1.4 1 0 0 1 1 1 1 zinc-ribbons Prok-RING_1 PF14446.6 gi|73670908|ref|YP_306923.1| - 0.0032 17.4 1.7 0.0056 16.6 1.7 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 PIN_4 PF13638.6 gi|73670908|ref|YP_306923.1| - 0.013 15.8 0.0 0.02 15.2 0.0 1.4 1 0 0 1 1 1 0 PIN domain Rad50_zn_hook PF04423.14 gi|73670908|ref|YP_306923.1| - 0.05 13.5 0.4 0.14 12.0 0.4 1.8 1 0 0 1 1 1 0 Rad50 zinc hook motif PIN PF01850.21 gi|73670908|ref|YP_306923.1| - 0.051 14.1 0.1 0.07 13.6 0.1 1.3 1 0 0 1 1 1 0 PIN domain DNA_ligase_ZBD PF03119.16 gi|73670908|ref|YP_306923.1| - 0.096 12.7 0.2 0.17 11.9 0.2 1.4 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Auto_anti-p27 PF06677.12 gi|73670908|ref|YP_306923.1| - 0.18 12.0 0.2 0.18 12.0 0.2 1.6 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) YdjO PF14169.6 gi|73670908|ref|YP_306923.1| - 1.2 9.0 3.8 0.81 9.5 0.7 2.2 2 1 0 2 2 2 0 Cold-inducible protein YdjO Pribosyltran PF00156.27 gi|73670909|ref|YP_306924.1| - 8.9e-22 77.3 0.6 1.4e-21 76.6 0.6 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|73670909|ref|YP_306924.1| - 2.2e-06 27.3 0.6 0.00013 21.5 0.1 2.1 1 1 0 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.6 gi|73670909|ref|YP_306924.1| - 6.1e-05 22.6 0.6 0.00028 20.4 0.1 1.9 1 1 1 2 2 2 1 Uracil phosphoribosyltransferase HTH_7 PF02796.15 gi|73670909|ref|YP_306924.1| - 0.001 19.1 0.1 0.0027 17.8 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase GerE PF00196.19 gi|73670909|ref|YP_306924.1| - 0.0086 15.6 0.0 0.021 14.4 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_11 PF08279.12 gi|73670909|ref|YP_306924.1| - 0.0088 16.0 0.2 0.051 13.5 0.1 2.2 3 0 0 3 3 3 1 HTH domain HTH_23 PF13384.6 gi|73670909|ref|YP_306924.1| - 0.044 13.6 0.1 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 Homeodomain-like domain Pribosyl_synth PF14572.6 gi|73670909|ref|YP_306924.1| - 0.06 13.4 0.1 0.089 12.8 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain Sigma70_r4 PF04545.16 gi|73670909|ref|YP_306924.1| - 0.11 12.0 0.0 0.23 11.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|73670909|ref|YP_306924.1| - 0.13 12.2 0.3 0.36 10.8 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_38 PF13936.6 gi|73670909|ref|YP_306924.1| - 0.14 12.0 0.1 8.2 6.3 0.0 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain DnaJ_CXXCXGXG PF00684.19 gi|73670910|ref|YP_306925.1| - 2.7e-09 37.2 11.1 2.7e-09 37.2 11.1 2.6 1 1 1 2 2 2 2 DnaJ central domain tRNA_anti-codon PF01336.25 gi|73670910|ref|YP_306925.1| - 3.6e-09 36.5 0.0 1.1e-08 35.0 0.0 1.9 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DHH PF01368.20 gi|73670910|ref|YP_306925.1| - 3.6e-07 30.3 0.2 7.6e-07 29.3 0.2 1.5 1 0 0 1 1 1 1 DHH family tRNA_anti_2 PF13742.6 gi|73670910|ref|YP_306925.1| - 0.00017 21.7 0.0 0.0017 18.5 0.0 2.4 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain S1 PF00575.23 gi|73670910|ref|YP_306925.1| - 0.012 16.0 0.3 0.012 16.0 0.3 2.5 3 0 0 3 3 3 0 S1 RNA binding domain RMI2 PF16100.5 gi|73670910|ref|YP_306925.1| - 0.018 14.9 0.0 0.038 13.8 0.0 1.5 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 Anti-TRAP PF15777.5 gi|73670910|ref|YP_306925.1| - 0.91 9.5 22.3 0.9 9.5 6.3 3.5 3 1 0 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-C4pol PF14260.6 gi|73670910|ref|YP_306925.1| - 1.4 9.4 13.7 6 7.4 5.1 2.6 2 0 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta Cytochrom_c3_2 PF14537.6 gi|73670910|ref|YP_306925.1| - 1.8 9.1 11.4 0.25 11.9 4.4 2.4 2 0 0 2 2 2 0 Cytochrome c3 zf-CHY PF05495.12 gi|73670910|ref|YP_306925.1| - 5.3 7.6 12.5 0.057 13.9 1.6 2.8 2 1 1 3 3 3 0 CHY zinc finger Band_7 PF01145.25 gi|73670911|ref|YP_306926.1| - 1.9e-37 129.0 2.8 2.8e-37 128.4 2.8 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|73670911|ref|YP_306926.1| - 1.5e-05 24.9 0.1 9.4e-05 22.2 0.1 2.1 2 0 0 2 2 2 1 SPFH domain-Band 7 family NfeD PF01957.18 gi|73670912|ref|YP_306927.1| - 2.4e-12 47.0 1.2 7.9e-12 45.4 0.3 2.3 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding CLP_protease PF00574.23 gi|73670912|ref|YP_306927.1| - 9.3e-07 28.9 0.5 1.5e-06 28.2 0.5 1.2 1 0 0 1 1 1 1 Clp protease ECH_1 PF00378.20 gi|73670912|ref|YP_306927.1| - 0.0068 15.7 0.2 0.79 9.0 0.0 2.2 2 0 0 2 2 2 2 Enoyl-CoA hydratase/isomerase SDH_sah PF01972.16 gi|73670912|ref|YP_306927.1| - 1.3 8.0 4.8 0.14 11.1 0.4 1.7 2 0 0 2 2 2 0 Serine dehydrogenase proteinase AIRS_C PF02769.22 gi|73670913|ref|YP_306928.1| - 1.2e-16 61.2 0.8 2.3e-16 60.3 0.8 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|73670913|ref|YP_306928.1| - 4.6e-09 36.8 0.3 1.3e-08 35.4 0.3 1.8 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain GATase PF00117.28 gi|73670914|ref|YP_306929.1| - 1.3e-18 67.5 0.0 1.6e-18 67.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|73670914|ref|YP_306929.1| - 4.1e-07 30.0 0.0 1.4e-06 28.3 0.0 1.7 1 1 0 1 1 1 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|73670914|ref|YP_306929.1| - 1.3e-06 28.3 0.0 2.2e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 gi|73670914|ref|YP_306929.1| - 5.4e-06 26.1 0.2 5.1e-05 23.0 0.0 1.9 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|73670914|ref|YP_306929.1| - 0.03 14.1 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family Methyltransf_31 PF13847.6 gi|73670916|ref|YP_306931.1| - 5.6e-13 49.0 0.0 8e-13 48.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73670916|ref|YP_306931.1| - 9.3e-13 48.7 0.0 1.6e-12 48.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73670916|ref|YP_306931.1| - 1.8e-08 34.9 0.0 3.1e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73670916|ref|YP_306931.1| - 1.6e-07 32.0 0.0 2.5e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73670916|ref|YP_306931.1| - 2.5e-06 27.4 0.0 5.9e-06 26.2 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73670916|ref|YP_306931.1| - 2.5e-06 27.1 0.0 4e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.20 gi|73670916|ref|YP_306931.1| - 5.4e-06 25.7 0.0 7.2e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Ubie_methyltran PF01209.18 gi|73670916|ref|YP_306931.1| - 9.8e-06 25.1 0.1 0.00012 21.5 0.0 2.1 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family TehB PF03848.14 gi|73670916|ref|YP_306931.1| - 3.3e-05 23.4 0.0 5.8e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Tellurite resistance protein TehB NodS PF05401.11 gi|73670916|ref|YP_306931.1| - 3.4e-05 23.6 0.0 4.5e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_15 PF09445.10 gi|73670916|ref|YP_306931.1| - 0.035 13.7 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_32 PF13679.6 gi|73670916|ref|YP_306931.1| - 0.038 14.0 0.0 0.078 13.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Big_1 PF02369.16 gi|73670917|ref|YP_306932.1| - 1.3e-07 31.5 3.0 2.9e-07 30.4 3.0 1.6 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 1) CarboxypepD_reg PF13620.6 gi|73670917|ref|YP_306932.1| - 1.5e-06 28.3 1.9 5.7e-06 26.5 0.6 2.4 2 1 0 2 2 2 1 Carboxypeptidase regulatory-like domain MG4 PF17789.1 gi|73670917|ref|YP_306932.1| - 6e-05 23.1 0.1 0.00027 21.0 0.1 1.9 1 1 1 2 2 2 1 Macroglobulin domain MG4 DUF824 PF05688.11 gi|73670917|ref|YP_306932.1| - 0.011 15.6 0.2 0.028 14.2 0.2 1.8 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) CarbopepD_reg_2 PF13715.6 gi|73670917|ref|YP_306932.1| - 0.016 15.2 0.3 0.065 13.2 0.1 2.1 2 1 0 2 2 2 0 CarboxypepD_reg-like domain Invasin_D3 PF09134.10 gi|73670917|ref|YP_306932.1| - 0.016 15.5 2.4 0.031 14.6 2.2 1.7 1 1 0 1 1 1 0 Invasin, domain 3 bMG3 PF11974.8 gi|73670917|ref|YP_306932.1| - 0.019 15.0 0.3 0.037 14.0 0.2 1.7 1 1 0 1 1 1 0 Bacterial alpha-2-macroglobulin MG3 domain BACON PF13004.7 gi|73670917|ref|YP_306932.1| - 0.34 10.9 2.1 1 9.4 2.1 1.9 1 1 0 1 1 1 0 Putative binding domain, N-terminal CarboxypepD_reg PF13620.6 gi|73670918|ref|YP_306933.1| - 0.016 15.5 0.0 0.036 14.3 0.0 1.6 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain Apc13p PF05839.11 gi|73670919|ref|YP_306934.1| - 0.18 12.0 1.3 0.35 11.1 0.0 1.9 2 1 0 2 2 2 0 Apc13p protein CarboxypepD_reg PF13620.6 gi|73670920|ref|YP_306935.1| - 0.0083 16.4 0.0 0.016 15.4 0.0 1.5 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain MFS_1 PF07690.16 gi|73670921|ref|YP_306936.1| - 6e-40 137.2 55.3 6e-40 137.2 55.3 2.6 2 1 0 2 2 2 1 Major Facilitator Superfamily MFS_3 PF05977.13 gi|73670921|ref|YP_306936.1| - 3.6e-07 29.0 12.6 3.9e-06 25.5 4.4 2.3 2 0 0 2 2 2 2 Transmembrane secretion effector Sugar_tr PF00083.24 gi|73670921|ref|YP_306936.1| - 0.00026 20.0 13.3 0.00026 20.0 13.3 2.9 3 0 0 3 3 3 2 Sugar (and other) transporter PadR PF03551.14 gi|73670922|ref|YP_306937.1| - 5.2e-20 71.2 0.0 9.5e-20 70.4 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|73670922|ref|YP_306937.1| - 0.00013 22.6 0.0 0.00022 21.8 0.0 1.3 1 0 0 1 1 1 1 Replication terminator protein DUF505 PF04458.12 gi|73670922|ref|YP_306937.1| - 0.0012 17.4 0.0 0.0013 17.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF505) TrmB PF01978.19 gi|73670922|ref|YP_306937.1| - 0.0014 18.5 0.0 0.0028 17.5 0.0 1.6 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF4364 PF14277.6 gi|73670922|ref|YP_306937.1| - 0.0024 17.6 0.1 0.0037 17.0 0.1 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) AphA_like PF14557.6 gi|73670922|ref|YP_306937.1| - 0.0055 16.4 0.0 0.0067 16.2 0.0 1.1 1 0 0 1 1 1 1 Putative AphA-like transcriptional regulator HTH_27 PF13463.6 gi|73670922|ref|YP_306937.1| - 0.0088 16.5 0.0 0.026 15.0 0.0 1.8 1 0 0 1 1 1 1 Winged helix DNA-binding domain Penicillinase_R PF03965.16 gi|73670922|ref|YP_306937.1| - 0.014 15.7 0.0 0.019 15.3 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor HTH_45 PF14947.6 gi|73670922|ref|YP_306937.1| - 0.025 14.6 0.2 0.066 13.2 0.1 1.8 2 1 0 2 2 2 0 Winged helix-turn-helix HTH_34 PF13601.6 gi|73670922|ref|YP_306937.1| - 0.077 13.2 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain GAS PF13851.6 gi|73670923|ref|YP_306938.1| - 0.0027 17.1 0.7 0.0027 17.1 0.7 1.4 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding Prefoldin_2 PF01920.20 gi|73670923|ref|YP_306938.1| - 0.011 15.7 3.8 3.3 7.7 0.0 3.0 2 1 1 3 3 3 0 Prefoldin subunit bZIP_1 PF00170.21 gi|73670923|ref|YP_306938.1| - 0.015 15.4 4.5 0.022 14.9 0.2 2.9 3 1 0 3 3 3 0 bZIP transcription factor DUF241 PF03087.14 gi|73670923|ref|YP_306938.1| - 0.021 14.7 4.1 1.4 8.7 0.8 2.2 2 0 0 2 2 2 0 Arabidopsis protein of unknown function Fusion_gly PF00523.18 gi|73670923|ref|YP_306938.1| - 0.022 13.1 0.0 0.029 12.6 0.0 1.1 1 0 0 1 1 1 0 Fusion glycoprotein F0 CCDC158 PF15921.5 gi|73670923|ref|YP_306938.1| - 0.06 11.2 0.2 0.089 10.6 0.2 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 158 Lebercilin PF15619.6 gi|73670923|ref|YP_306938.1| - 0.099 12.3 4.6 0.27 10.9 0.9 2.1 2 0 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease FlxA PF14282.6 gi|73670923|ref|YP_306938.1| - 0.14 12.1 0.8 0.36 10.9 0.3 1.9 2 1 0 2 2 2 0 FlxA-like protein Snapin_Pallidin PF14712.6 gi|73670923|ref|YP_306938.1| - 0.16 12.4 3.0 1.8 9.0 1.2 2.7 2 1 1 3 3 3 0 Snapin/Pallidin CCDC-167 PF15188.6 gi|73670923|ref|YP_306938.1| - 0.24 11.7 4.8 0.58 10.5 0.0 2.8 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 DUF1664 PF07889.12 gi|73670923|ref|YP_306938.1| - 0.27 11.3 1.1 1.5 8.9 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) TRAF_BIRC3_bd PF16673.5 gi|73670923|ref|YP_306938.1| - 0.3 10.9 4.2 0.6 9.9 1.7 2.3 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain FlaC_arch PF05377.11 gi|73670923|ref|YP_306938.1| - 0.46 10.9 5.7 3.2 8.2 0.9 3.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) TMF_DNA_bd PF12329.8 gi|73670923|ref|YP_306938.1| - 0.68 10.0 5.7 0.75 9.8 2.1 2.5 2 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding CLZ PF16526.5 gi|73670923|ref|YP_306938.1| - 1.7 9.0 4.6 4 7.9 0.9 2.5 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Acetyltransf_10 PF13673.7 gi|73670924|ref|YP_306939.1| - 5.5e-13 49.0 0.0 7.3e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|73670924|ref|YP_306939.1| - 3.2e-11 43.5 0.0 3.9e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73670924|ref|YP_306939.1| - 2.6e-10 40.6 0.0 3.9e-10 40.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73670924|ref|YP_306939.1| - 0.00018 21.6 0.0 0.001 19.1 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|73670924|ref|YP_306939.1| - 0.078 13.0 0.1 0.41 10.6 0.0 2.1 2 1 0 2 2 2 0 FR47-like protein Acetyltransf_CG PF14542.6 gi|73670924|ref|YP_306939.1| - 0.12 12.6 0.0 0.18 12.0 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DDE_Tnp_1 PF01609.21 gi|73670925|ref|YP_306940.1| - 1.6e-20 73.7 0.3 1.6e-20 73.7 0.3 1.8 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_2 PF04693.12 gi|73670925|ref|YP_306940.1| - 0.0015 17.9 0.6 0.0026 17.1 0.6 1.4 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 T2SSE PF00437.20 gi|73670926|ref|YP_306941.1| - 1.4e-11 44.0 0.1 2.6e-11 43.1 0.1 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein PIN PF01850.21 gi|73670926|ref|YP_306941.1| - 2e-06 28.3 0.0 5.8e-06 26.8 0.0 1.8 1 0 0 1 1 1 1 PIN domain KH_1 PF00013.29 gi|73670926|ref|YP_306941.1| - 0.00011 22.0 0.8 0.00034 20.4 0.3 2.1 2 0 0 2 2 1 1 KH domain KH_2 PF07650.17 gi|73670926|ref|YP_306941.1| - 0.00021 21.0 2.3 0.00073 19.3 2.3 2.0 1 0 0 1 1 1 1 KH domain TIP49 PF06068.13 gi|73670926|ref|YP_306941.1| - 0.0012 18.1 1.2 0.0042 16.4 0.0 2.1 2 1 0 2 2 2 1 TIP49 P-loop domain AAA_16 PF13191.6 gi|73670926|ref|YP_306941.1| - 0.0018 18.7 0.0 0.0035 17.8 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|73670926|ref|YP_306941.1| - 0.0048 16.2 0.0 0.0099 15.2 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin PIN_4 PF13638.6 gi|73670926|ref|YP_306941.1| - 0.0074 16.6 0.1 0.024 15.0 0.0 2.0 2 1 0 2 2 1 1 PIN domain AAA_33 PF13671.6 gi|73670926|ref|YP_306941.1| - 0.01 16.0 0.0 0.02 15.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 gi|73670926|ref|YP_306941.1| - 0.012 15.5 0.0 0.29 11.0 0.0 2.4 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_18 PF13238.6 gi|73670926|ref|YP_306941.1| - 0.012 16.1 0.0 0.03 14.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|73670926|ref|YP_306941.1| - 0.016 15.6 0.0 0.045 14.2 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|73670926|ref|YP_306941.1| - 0.016 15.0 0.0 0.03 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|73670926|ref|YP_306941.1| - 0.019 14.9 0.0 0.048 13.6 0.0 1.7 1 0 0 1 1 1 0 NTPase KH_4 PF13083.6 gi|73670926|ref|YP_306941.1| - 0.019 14.8 1.2 0.076 12.9 0.7 2.4 2 0 0 2 2 2 0 KH domain AAA_5 PF07728.14 gi|73670926|ref|YP_306941.1| - 0.033 14.2 0.0 0.16 11.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATPase PF06745.13 gi|73670926|ref|YP_306941.1| - 0.035 13.4 0.0 0.088 12.1 0.0 1.6 1 0 0 1 1 1 0 KaiC AAA_29 PF13555.6 gi|73670926|ref|YP_306941.1| - 0.042 13.6 0.0 0.1 12.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|73670926|ref|YP_306941.1| - 0.053 13.2 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain RuvB_N PF05496.12 gi|73670926|ref|YP_306941.1| - 0.055 13.2 0.1 0.3 10.8 0.0 2.1 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain TsaE PF02367.17 gi|73670926|ref|YP_306941.1| - 0.057 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 gi|73670926|ref|YP_306941.1| - 0.076 12.6 0.1 0.19 11.3 0.0 1.6 2 0 0 2 2 1 0 AAA domain IstB_IS21 PF01695.17 gi|73670926|ref|YP_306941.1| - 0.09 12.5 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_24 PF13479.6 gi|73670926|ref|YP_306941.1| - 0.096 12.4 0.0 0.26 11.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|73670926|ref|YP_306941.1| - 0.099 13.0 0.0 0.2 12.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase ATP_bind_1 PF03029.17 gi|73670926|ref|YP_306941.1| - 0.14 11.9 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein ABC_tran PF00005.27 gi|73670926|ref|YP_306941.1| - 0.17 12.4 0.0 0.36 11.3 0.0 1.6 1 0 0 1 1 1 0 ABC transporter PPV_E1_C PF00519.17 gi|73670926|ref|YP_306941.1| - 0.23 10.2 0.0 0.34 9.7 0.0 1.1 1 0 0 1 1 1 0 Papillomavirus helicase K_trans PF02705.16 gi|73670927|ref|YP_306942.1| - 7.2e-172 572.6 39.7 8.4e-172 572.4 39.7 1.0 1 0 0 1 1 1 1 K+ potassium transporter MatE PF01554.18 gi|73670928|ref|YP_306943.1| - 4.3e-54 182.5 45.2 1.1e-29 103.2 9.9 3.7 4 0 0 4 4 4 3 MatE Polysacc_synt_C PF14667.6 gi|73670928|ref|YP_306943.1| - 1.5e-12 47.8 30.7 9.1e-11 42.0 13.9 4.7 4 1 1 5 5 5 2 Polysaccharide biosynthesis C-terminal domain MarR PF01047.22 gi|73670929|ref|YP_306944.1| - 1.1e-12 47.7 0.1 5.7e-12 45.4 0.1 2.1 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|73670929|ref|YP_306944.1| - 1.6e-09 38.1 0.3 8.8e-09 35.7 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|73670929|ref|YP_306944.1| - 3.8e-06 26.7 0.0 5e-05 23.1 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_34 PF13601.6 gi|73670929|ref|YP_306944.1| - 4.1e-06 26.9 0.0 6.8e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain PadR PF03551.14 gi|73670929|ref|YP_306944.1| - 0.0011 18.9 0.1 0.0034 17.3 0.0 1.7 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family Fe_dep_repress PF01325.19 gi|73670929|ref|YP_306944.1| - 0.0034 17.5 0.0 0.076 13.2 0.0 2.2 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain DUF4364 PF14277.6 gi|73670929|ref|YP_306944.1| - 0.0057 16.4 0.8 0.0073 16.1 0.1 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4364) HxlR PF01638.17 gi|73670929|ref|YP_306944.1| - 0.017 15.0 0.0 0.037 13.9 0.0 1.6 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_Crp_2 PF13545.6 gi|73670929|ref|YP_306944.1| - 0.11 12.5 0.5 8.5 6.4 0.1 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain PKD PF00801.20 gi|73670930|ref|YP_306945.1| - 4.6e-46 154.5 32.7 3.5e-12 46.0 0.8 4.9 4 0 0 4 4 4 4 PKD domain NLPC_P60 PF00877.19 gi|73670930|ref|YP_306945.1| - 8.7e-15 54.7 0.2 1.8e-14 53.6 0.2 1.5 1 0 0 1 1 1 1 NlpC/P60 family PKD_3 PF16820.5 gi|73670930|ref|YP_306945.1| - 7.4e-10 38.4 18.9 0.044 13.5 0.3 4.5 4 0 0 4 4 4 4 PKD-like domain CHAP PF05257.16 gi|73670930|ref|YP_306945.1| - 0.00025 21.5 0.7 0.00025 21.5 0.7 3.0 3 0 0 3 3 3 1 CHAP domain SQAPI PF16845.5 gi|73670930|ref|YP_306945.1| - 0.0041 17.4 1.8 9.2 6.7 0.0 3.7 3 0 0 3 3 3 1 Aspartic acid proteinase inhibitor UPF0047 PF01894.17 gi|73670933|ref|YP_306948.1| - 1.2e-18 67.3 0.0 1.7e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 GATase_7 PF13537.6 gi|73670934|ref|YP_306949.1| - 7e-19 68.0 0.0 1.1e-18 67.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|73670934|ref|YP_306949.1| - 3.2e-17 63.0 0.0 7.9e-17 61.7 0.0 1.6 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|73670934|ref|YP_306949.1| - 7.9e-08 31.5 0.0 1.3e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Pribosyltran PF00156.27 gi|73670934|ref|YP_306949.1| - 2.2e-05 24.0 0.2 4.2e-05 23.1 0.2 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|73670934|ref|YP_306949.1| - 0.22 11.0 0.1 0.37 10.3 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase Ribosomal_L37e PF01907.19 gi|73670935|ref|YP_306950.1| - 2.7e-21 75.5 15.4 2.9e-21 75.4 15.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e zn-ribbon_14 PF16503.5 gi|73670935|ref|YP_306950.1| - 0.5 9.9 0.3 0.5 9.9 0.3 2.5 3 0 0 3 3 3 0 Zinc-ribbon YhfH PF14149.6 gi|73670935|ref|YP_306950.1| - 0.61 10.1 5.8 0.8 9.7 0.5 2.3 1 1 1 2 2 2 0 YhfH-like protein DUF35_N PF12172.8 gi|73670935|ref|YP_306950.1| - 0.71 9.8 5.7 2.4 8.1 0.9 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) LSM PF01423.22 gi|73670936|ref|YP_306951.1| - 1.2e-21 76.1 0.1 1.3e-21 76.0 0.1 1.0 1 0 0 1 1 1 1 LSM domain FHIPEP PF00771.20 gi|73670936|ref|YP_306951.1| - 0.092 11.2 0.1 0.11 10.9 0.1 1.0 1 0 0 1 1 1 0 FHIPEP family Phos_pyr_kin PF08543.12 gi|73670937|ref|YP_306952.1| - 2.2e-80 269.6 2.1 2.9e-80 269.2 2.1 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|73670937|ref|YP_306952.1| - 3.8e-63 212.0 0.2 6.5e-63 211.2 0.2 1.4 1 0 0 1 1 1 1 Thiamine-phosphate synthase PfkB PF00294.24 gi|73670937|ref|YP_306952.1| - 2.2e-09 37.1 1.5 3e-09 36.6 1.5 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HK PF02110.15 gi|73670937|ref|YP_306952.1| - 0.00012 21.5 0.5 0.00022 20.7 0.5 1.4 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family HHH_5 PF14520.6 gi|73670937|ref|YP_306952.1| - 0.069 13.8 0.1 13 6.5 0.0 3.0 2 0 0 2 2 2 0 Helix-hairpin-helix domain ATP11 PF06644.11 gi|73670938|ref|YP_306953.1| - 0.014 15.2 6.2 0.016 15.0 6.2 1.0 1 0 0 1 1 1 0 ATP11 protein AAR2 PF05282.11 gi|73670938|ref|YP_306953.1| - 0.14 11.5 3.6 0.17 11.3 3.6 1.0 1 0 0 1 1 1 0 AAR2 protein EIIBC-GUT_N PF03612.14 gi|73670938|ref|YP_306953.1| - 0.82 9.4 3.9 0.97 9.1 3.9 1.0 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus PALP PF00291.25 gi|73670939|ref|YP_306954.1| - 1.7e-43 149.1 0.0 2.1e-43 148.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF1699 PF08004.11 gi|73670941|ref|YP_306956.1| - 1.2e-59 199.7 1.1 1.3e-59 199.5 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) DUF1699 PF08004.11 gi|73670942|ref|YP_306957.1| - 4e-62 207.6 1.8 4.6e-62 207.5 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) MA3 PF02847.17 gi|73670942|ref|YP_306957.1| - 0.031 14.3 1.2 3 7.9 0.1 2.1 2 0 0 2 2 2 0 MA3 domain Histidinol_dh PF00815.20 gi|73670943|ref|YP_306958.1| - 2.8e-170 566.7 1.7 3.5e-170 566.5 1.7 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase DEAD PF00270.29 gi|73670944|ref|YP_306959.1| - 1e-24 87.2 0.0 2.5e-24 86.0 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase HHH_5 PF14520.6 gi|73670944|ref|YP_306959.1| - 7.3e-11 42.5 0.6 2.9e-10 40.6 0.3 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain Helicase_C PF00271.31 gi|73670944|ref|YP_306959.1| - 7.7e-08 32.7 0.0 1.9e-06 28.2 0.0 3.0 2 1 0 2 2 2 1 Helicase conserved C-terminal domain DNA_pol_lambd_f PF10391.9 gi|73670944|ref|YP_306959.1| - 0.0015 18.3 0.0 0.0042 16.9 0.0 1.7 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH PF00633.23 gi|73670944|ref|YP_306959.1| - 0.06 13.2 0.0 3.7 7.6 0.0 3.3 3 0 0 3 3 3 0 Helix-hairpin-helix motif DUF4332 PF14229.6 gi|73670944|ref|YP_306959.1| - 0.078 13.2 0.0 0.32 11.2 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4332) Cdd1 PF11731.8 gi|73670944|ref|YP_306959.1| - 0.1 12.9 0.0 0.22 11.8 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus HHH_2 PF12826.7 gi|73670944|ref|YP_306959.1| - 0.11 12.7 0.0 0.35 11.0 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix motif Sec63 PF02889.16 gi|73670944|ref|YP_306959.1| - 0.18 11.0 0.0 0.26 10.4 0.0 1.3 1 0 0 1 1 1 0 Sec63 Brl domain DUF4189 PF13827.6 gi|73670944|ref|YP_306959.1| - 0.28 11.7 2.5 0.53 10.8 2.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4189) ABC_tran PF00005.27 gi|73670945|ref|YP_306960.1| - 5.7e-39 133.8 0.0 1.3e-19 71.0 0.0 3.1 3 1 0 3 3 2 2 ABC transporter SMC_N PF02463.19 gi|73670945|ref|YP_306960.1| - 1.3e-14 54.2 11.8 5.9e-07 29.1 3.4 4.0 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain RLI PF04068.15 gi|73670945|ref|YP_306960.1| - 7.8e-11 41.6 3.7 1.5e-10 40.7 3.7 1.5 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI AAA_21 PF13304.6 gi|73670945|ref|YP_306960.1| - 3.1e-08 33.8 7.0 0.1 12.4 0.1 4.2 2 2 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system Fer4 PF00037.27 gi|73670945|ref|YP_306960.1| - 1.7e-07 30.7 3.6 1.7e-07 30.7 3.6 2.5 3 0 0 3 3 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73670945|ref|YP_306960.1| - 6.1e-06 26.1 12.8 3.1e-05 23.9 2.8 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Rad17 PF03215.15 gi|73670945|ref|YP_306960.1| - 1.6e-05 24.9 0.0 0.19 11.6 0.0 2.4 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_16 PF13191.6 gi|73670945|ref|YP_306960.1| - 4.2e-05 24.0 0.1 0.029 14.7 0.0 2.7 2 1 0 2 2 2 1 AAA ATPase domain Fer4_21 PF14697.6 gi|73670945|ref|YP_306960.1| - 0.00015 21.8 8.2 0.00025 21.1 8.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain RNA_helicase PF00910.22 gi|73670945|ref|YP_306960.1| - 0.00023 21.5 0.0 0.6 10.5 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_23 PF13476.6 gi|73670945|ref|YP_306960.1| - 0.00025 21.6 0.3 0.19 12.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain Fer4_9 PF13187.6 gi|73670945|ref|YP_306960.1| - 0.00035 20.7 9.1 0.00063 19.9 9.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73670945|ref|YP_306960.1| - 0.00039 20.3 1.7 0.00039 20.3 1.7 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_15 PF13175.6 gi|73670945|ref|YP_306960.1| - 0.00047 20.0 2.7 1.9 8.1 0.0 3.4 3 1 0 3 3 3 1 AAA ATPase domain AAA_24 PF13479.6 gi|73670945|ref|YP_306960.1| - 0.00067 19.4 0.2 0.84 9.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 gi|73670945|ref|YP_306960.1| - 0.00086 19.2 0.9 0.25 11.3 0.1 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_14 PF13173.6 gi|73670945|ref|YP_306960.1| - 0.00095 19.2 2.8 8.4 6.4 0.0 3.8 3 1 1 4 4 4 0 AAA domain AAA_22 PF13401.6 gi|73670945|ref|YP_306960.1| - 0.001 19.3 0.0 0.38 11.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain Fer4_7 PF12838.7 gi|73670945|ref|YP_306960.1| - 0.0016 19.0 9.8 0.0035 17.9 9.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_29 PF13555.6 gi|73670945|ref|YP_306960.1| - 0.0018 18.0 2.3 1.2 8.9 0.2 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain Fer4_10 PF13237.6 gi|73670945|ref|YP_306960.1| - 0.0027 17.8 10.9 0.0039 17.3 1.0 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA PF00004.29 gi|73670945|ref|YP_306960.1| - 0.0037 17.7 0.0 0.48 10.9 0.0 2.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.17 gi|73670945|ref|YP_306960.1| - 0.0054 16.9 0.4 2.1 8.4 0.0 3.0 3 0 0 3 3 3 1 Helicase HerA, central domain NACHT PF05729.12 gi|73670945|ref|YP_306960.1| - 0.01 15.8 0.3 0.59 10.0 0.0 2.3 2 0 0 2 2 2 0 NACHT domain SbcCD_C PF13558.6 gi|73670945|ref|YP_306960.1| - 0.013 15.7 0.0 9.8 6.5 0.0 2.8 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_25 PF13481.6 gi|73670945|ref|YP_306960.1| - 0.016 14.8 0.1 0.19 11.3 0.0 2.4 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|73670945|ref|YP_306960.1| - 0.031 14.8 0.5 77 3.8 0.0 3.5 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 gi|73670945|ref|YP_306960.1| - 0.042 14.0 1.5 1.2 9.3 0.0 3.1 4 0 0 4 4 3 0 AAA domain MMR_HSR1 PF01926.23 gi|73670945|ref|YP_306960.1| - 0.091 12.8 0.2 2.5 8.2 0.1 2.7 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_5 PF07728.14 gi|73670945|ref|YP_306960.1| - 0.15 12.0 0.7 26 4.8 0.1 3.0 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) CLP1_P PF16575.5 gi|73670945|ref|YP_306960.1| - 0.17 11.6 0.1 23 4.7 0.0 3.1 3 0 0 3 3 3 0 mRNA cleavage and polyadenylation factor CLP1 P-loop NTPase_1 PF03266.15 gi|73670945|ref|YP_306960.1| - 0.25 11.2 3.1 5.6 6.8 0.1 3.3 3 0 0 3 3 3 0 NTPase MeaB PF03308.16 gi|73670945|ref|YP_306960.1| - 0.29 10.1 2.6 3.5 6.5 0.2 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_30 PF13604.6 gi|73670945|ref|YP_306960.1| - 1.3 8.7 2.8 17 5.1 0.1 3.0 3 0 0 3 3 3 0 AAA domain Fer4_4 PF12800.7 gi|73670945|ref|YP_306960.1| - 1.3 9.7 14.3 0.54 10.9 3.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Abhydrolase_1 PF00561.20 gi|73670946|ref|YP_306961.1| - 1.1e-08 35.0 0.0 1.9e-08 34.3 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|73670946|ref|YP_306961.1| - 3.9e-05 23.0 0.0 4.9e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|73670946|ref|YP_306961.1| - 0.0013 19.4 0.0 0.0016 19.1 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family OTCace PF00185.24 gi|73670947|ref|YP_306962.1| - 2e-59 200.2 0.0 2.8e-59 199.7 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|73670947|ref|YP_306962.1| - 2.3e-53 180.2 0.0 3.4e-53 179.6 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CBM39 PF15886.5 gi|73670947|ref|YP_306962.1| - 0.17 11.8 0.0 0.33 10.9 0.0 1.4 1 0 0 1 1 1 0 Carbohydrate binding domain (family 32) GARS_A PF01071.19 gi|73670948|ref|YP_306963.1| - 5.4e-57 192.7 0.0 9.4e-57 191.9 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|73670948|ref|YP_306963.1| - 8.1e-27 93.8 0.2 1.6e-26 92.9 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|73670948|ref|YP_306963.1| - 2e-15 56.9 0.8 6.5e-15 55.2 0.3 2.1 2 1 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_3 PF02655.14 gi|73670948|ref|YP_306963.1| - 0.00054 20.0 0.0 0.00096 19.2 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|73670948|ref|YP_306963.1| - 0.0055 16.3 0.0 0.024 14.2 0.0 2.0 2 0 0 2 2 2 1 ATP-grasp domain GFO_IDH_MocA PF01408.22 gi|73670948|ref|YP_306963.1| - 0.027 15.3 0.2 0.12 13.2 0.0 2.2 2 1 1 3 3 3 0 Oxidoreductase family, NAD-binding Rossmann fold DUF166 PF02593.14 gi|73670948|ref|YP_306963.1| - 0.081 12.5 0.0 0.29 10.6 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function QRPTase_N PF02749.16 gi|73670948|ref|YP_306963.1| - 0.097 12.7 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, N-terminal domain GSH-S_ATP PF02955.16 gi|73670948|ref|YP_306963.1| - 0.11 11.9 0.0 0.24 10.8 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain LpxI_N PF17930.1 gi|73670948|ref|YP_306963.1| - 0.11 12.4 0.0 0.58 10.1 0.1 2.3 3 0 0 3 3 3 0 LpxI N-terminal domain CMD PF02627.20 gi|73670949|ref|YP_306964.1| - 1.1e-05 25.3 0.4 1.3e-05 25.1 0.4 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Pribosyltran PF00156.27 gi|73670950|ref|YP_306965.1| - 6.4e-12 45.3 0.6 1e-11 44.6 0.6 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|73670950|ref|YP_306965.1| - 0.0089 15.5 0.0 0.012 15.1 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase CarS-like PF01864.17 gi|73670951|ref|YP_306966.1| - 1.1e-47 162.3 1.8 1.2e-47 162.1 1.8 1.0 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|73670951|ref|YP_306966.1| - 1.7e-07 31.3 3.1 1.7e-07 31.3 3.1 2.0 1 1 1 2 2 2 1 Cytidylyltransferase family DUF5518 PF17647.1 gi|73670951|ref|YP_306966.1| - 0.2 11.8 9.5 0.26 11.4 1.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5518) CTP_synth_N PF06418.14 gi|73670953|ref|YP_306968.1| - 1.3e-124 414.8 0.6 1.9e-124 414.2 0.6 1.3 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|73670953|ref|YP_306968.1| - 3.4e-56 190.0 0.0 7.6e-56 188.9 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|73670953|ref|YP_306968.1| - 2.7e-06 27.3 0.0 1.5e-05 24.8 0.0 2.3 2 1 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|73670953|ref|YP_306968.1| - 0.00037 20.5 0.0 0.0011 19.0 0.0 2.1 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MeaB PF03308.16 gi|73670953|ref|YP_306968.1| - 0.033 13.2 0.2 0.062 12.3 0.2 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DJ-1_PfpI PF01965.24 gi|73670953|ref|YP_306968.1| - 0.12 12.2 0.1 0.85 9.4 0.0 2.3 2 1 1 3 3 3 0 DJ-1/PfpI family DUF4271 PF14093.6 gi|73670954|ref|YP_306969.1| - 0.00052 20.0 6.0 0.00077 19.4 6.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4271) Na_Ca_ex PF01699.24 gi|73670954|ref|YP_306969.1| - 0.02 14.9 2.2 0.027 14.4 2.2 1.2 1 0 0 1 1 1 0 Sodium/calcium exchanger protein EMP70 PF02990.16 gi|73670954|ref|YP_306969.1| - 0.33 9.6 3.8 0.46 9.1 3.8 1.1 1 0 0 1 1 1 0 Endomembrane protein 70 Trm112p PF03966.16 gi|73670955|ref|YP_306970.1| - 2.7e-10 40.7 1.0 4.6e-10 39.9 1.0 1.4 1 1 0 1 1 1 1 Trm112p-like protein Elf1 PF05129.13 gi|73670955|ref|YP_306970.1| - 0.003 17.6 0.0 0.0031 17.5 0.0 1.0 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.6 gi|73670955|ref|YP_306970.1| - 0.0097 16.3 0.7 0.014 15.8 0.7 1.3 1 1 0 1 1 1 1 Restriction alleviation protein Lar Cys_rich_KTR PF14205.6 gi|73670955|ref|YP_306970.1| - 0.01 15.6 2.5 0.035 13.9 2.5 1.7 1 1 0 1 1 1 0 Cysteine-rich KTR TF_Zn_Ribbon PF08271.12 gi|73670955|ref|YP_306970.1| - 0.016 14.7 1.6 1.5 8.4 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-C3HC4_5 PF17121.5 gi|73670955|ref|YP_306970.1| - 0.024 14.5 0.7 2.8 7.9 0.0 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 gi|73670955|ref|YP_306970.1| - 0.027 14.5 3.5 0.42 10.7 0.8 2.1 2 0 0 2 2 2 0 RING-type zinc-finger C1_4 PF07975.12 gi|73670955|ref|YP_306970.1| - 0.027 14.7 0.1 0.04 14.2 0.1 1.3 1 1 0 1 1 1 0 TFIIH C1-like domain zf-piccolo PF05715.13 gi|73670955|ref|YP_306970.1| - 0.033 14.3 0.5 3.8 7.7 0.1 2.1 2 0 0 2 2 2 0 Piccolo Zn-finger DUF3797 PF12677.7 gi|73670955|ref|YP_306970.1| - 0.038 13.9 4.4 0.33 10.9 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) YacG PF03884.14 gi|73670955|ref|YP_306970.1| - 0.047 13.4 0.5 7 6.5 0.1 2.1 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG Zn-C2H2_12 PF18112.1 gi|73670955|ref|YP_306970.1| - 0.049 14.1 6.4 0.19 12.2 0.7 2.2 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain FdhE PF04216.12 gi|73670955|ref|YP_306970.1| - 0.062 13.2 0.2 0.075 12.9 0.2 1.0 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zf-ribbon_3 PF13248.6 gi|73670955|ref|YP_306970.1| - 0.076 12.5 1.9 1.2 8.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain PADR1 PF08063.12 gi|73670955|ref|YP_306970.1| - 0.09 12.6 0.2 4.1 7.3 0.0 2.1 2 0 0 2 2 2 0 PADR1 (NUC008) domain zf-Di19 PF05605.12 gi|73670955|ref|YP_306970.1| - 0.096 13.0 3.5 1.8 8.9 3.5 2.0 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-WRNIP1_ubi PF18279.1 gi|73670955|ref|YP_306970.1| - 0.11 13.2 0.6 24 5.9 0.1 2.2 2 0 0 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain CK_II_beta PF01214.18 gi|73670955|ref|YP_306970.1| - 0.13 12.0 0.4 0.15 11.9 0.4 1.0 1 0 0 1 1 1 0 Casein kinase II regulatory subunit Anti-TRAP PF15777.5 gi|73670955|ref|YP_306970.1| - 0.15 12.1 1.8 5.8 7.0 0.3 2.1 1 1 1 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein DNA_ligase_ZBD PF03119.16 gi|73670955|ref|YP_306970.1| - 0.47 10.5 5.4 3.8 7.6 1.3 2.4 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Cellulose_synt PF03552.14 gi|73670956|ref|YP_306971.1| - 0.0056 15.2 4.5 0.0068 15.0 4.5 1.1 1 0 0 1 1 1 1 Cellulose synthase Cytochrom_B_C PF00032.17 gi|73670956|ref|YP_306971.1| - 0.03 14.6 2.4 0.03 14.6 1.7 1.4 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD TctB PF07331.11 gi|73670956|ref|YP_306971.1| - 1.9 8.8 10.9 11 6.3 10.9 2.0 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family RexA PF15969.5 gi|73670957|ref|YP_306972.1| - 0.0038 16.8 1.6 0.0085 15.7 0.5 1.9 1 1 1 2 2 2 1 Intracellular sensor of Lambda phage, Abi component Prismane PF03063.20 gi|73670959|ref|YP_306974.1| - 2.6e-170 567.5 0.9 3.1e-170 567.3 0.9 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Fer4_6 PF12837.7 gi|73670960|ref|YP_306975.1| - 9.2e-12 44.5 31.4 0.0027 17.7 1.3 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_11 PF13247.6 gi|73670960|ref|YP_306975.1| - 5e-08 33.0 24.4 7.3e-07 29.2 17.3 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|73670960|ref|YP_306975.1| - 1.1e-07 32.3 32.0 0.00022 21.7 11.9 3.6 2 2 3 5 5 5 5 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73670960|ref|YP_306975.1| - 3.3e-07 30.0 32.5 0.018 15.1 2.6 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|73670960|ref|YP_306975.1| - 3.6e-07 30.2 29.8 0.0022 18.1 9.0 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|73670960|ref|YP_306975.1| - 4.1e-07 30.0 30.4 0.00088 19.4 9.6 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73670960|ref|YP_306975.1| - 4.1e-06 26.4 44.9 0.011 15.6 2.1 5.5 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_3 PF12798.7 gi|73670960|ref|YP_306975.1| - 0.002 18.9 16.4 0.01 16.7 3.3 4.5 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|73670960|ref|YP_306975.1| - 0.0026 18.1 3.4 0.0026 18.1 3.4 5.0 4 1 0 4 4 4 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73670960|ref|YP_306975.1| - 0.004 18.1 32.6 0.19 12.7 5.8 4.9 3 1 0 4 4 4 3 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|73670960|ref|YP_306975.1| - 0.0064 16.6 31.9 0.022 14.9 0.4 3.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|73670960|ref|YP_306975.1| - 0.0068 16.8 5.8 0.0068 16.8 5.8 2.8 2 2 0 2 2 2 1 4Fe-4S dicluster domain Usp PF00582.26 gi|73670961|ref|YP_306976.1| - 1.6e-34 119.5 0.1 2e-34 119.1 0.1 1.1 1 0 0 1 1 1 1 Universal stress protein family Polbeta PF18765.1 gi|73670961|ref|YP_306976.1| - 0.029 14.4 0.0 0.14 12.3 0.0 2.0 2 1 0 2 2 2 0 Polymerase beta, Nucleotidyltransferase Gate PF07670.14 gi|73670962|ref|YP_306977.1| - 9.8e-07 29.0 21.7 8.1e-05 22.9 4.6 3.0 2 2 0 2 2 2 2 Nucleoside recognition Usp PF00582.26 gi|73670963|ref|YP_306978.1| - 1.6e-36 125.9 0.0 1.8e-36 125.7 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family PmbA_TldD PF01523.16 gi|73670964|ref|YP_306979.1| - 4.2e-56 190.8 1.5 5.8e-56 190.4 1.5 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|73670965|ref|YP_306980.1| - 3.5e-66 223.9 0.6 4.9e-66 223.4 0.6 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Lon_C PF05362.13 gi|73670966|ref|YP_306981.1| - 6.3e-33 114.1 5.1 1.2e-32 113.2 5.1 1.5 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.6 gi|73670966|ref|YP_306981.1| - 1.8e-28 99.6 0.0 4.8e-21 75.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|73670966|ref|YP_306981.1| - 1.3e-16 60.7 0.2 6.7e-10 38.7 0.2 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|73670966|ref|YP_306981.1| - 2.8e-15 56.4 0.0 1.1e-08 35.0 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_5 PF07728.14 gi|73670966|ref|YP_306981.1| - 1.2e-10 41.6 0.0 0.00021 21.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) ChlI PF13541.6 gi|73670966|ref|YP_306981.1| - 4.9e-10 39.3 0.5 9.9e-10 38.3 0.5 1.5 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA PF00004.29 gi|73670966|ref|YP_306981.1| - 2e-07 31.5 0.0 0.0033 17.8 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|73670966|ref|YP_306981.1| - 1.6e-06 27.4 2.0 0.029 13.5 0.0 3.3 4 0 0 4 4 4 2 MCM P-loop domain AAA_22 PF13401.6 gi|73670966|ref|YP_306981.1| - 5e-05 23.6 0.0 0.0023 18.2 0.0 2.6 3 0 0 3 3 2 1 AAA domain Sigma54_activ_2 PF14532.6 gi|73670966|ref|YP_306981.1| - 0.00031 20.9 0.0 0.21 11.7 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_3 PF07726.11 gi|73670966|ref|YP_306981.1| - 0.00032 20.6 0.0 0.99 9.3 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|73670966|ref|YP_306981.1| - 0.00033 20.4 0.0 0.15 11.8 0.0 2.5 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_7 PF12775.7 gi|73670966|ref|YP_306981.1| - 0.00083 18.9 0.0 0.0051 16.4 0.0 2.1 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_19 PF13245.6 gi|73670966|ref|YP_306981.1| - 0.0018 18.6 1.0 0.028 14.7 1.0 2.5 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 gi|73670966|ref|YP_306981.1| - 0.0039 16.4 0.0 2 7.6 0.0 2.3 2 0 0 2 2 2 2 TIP49 P-loop domain PhoH PF02562.16 gi|73670966|ref|YP_306981.1| - 0.0044 16.5 0.0 0.013 15.0 0.0 1.7 1 0 0 1 1 1 1 PhoH-like protein AAA_16 PF13191.6 gi|73670966|ref|YP_306981.1| - 0.0044 17.4 0.0 0.25 11.7 0.0 2.6 3 0 0 3 3 2 1 AAA ATPase domain Birna_VP4 PF01768.16 gi|73670966|ref|YP_306981.1| - 0.005 16.7 3.4 0.23 11.3 0.3 3.2 3 0 0 3 3 3 1 Birnavirus VP4 protein Parvo_NS1 PF01057.17 gi|73670966|ref|YP_306981.1| - 0.0051 15.9 0.0 0.0089 15.1 0.0 1.3 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 AAA_18 PF13238.6 gi|73670966|ref|YP_306981.1| - 0.014 16.0 0.0 0.054 14.0 0.0 2.1 2 0 0 2 2 1 0 AAA domain AAA_30 PF13604.6 gi|73670966|ref|YP_306981.1| - 0.015 15.0 0.0 0.068 12.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|73670966|ref|YP_306981.1| - 0.017 14.8 0.0 0.056 13.2 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_33 PF13671.6 gi|73670966|ref|YP_306981.1| - 0.031 14.4 0.0 0.073 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_2 PF07724.14 gi|73670966|ref|YP_306981.1| - 0.04 14.0 0.1 12 6.0 0.0 2.9 3 0 0 3 3 2 0 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 gi|73670966|ref|YP_306981.1| - 0.044 13.0 0.0 0.079 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_28 PF13521.6 gi|73670966|ref|YP_306981.1| - 0.08 13.2 0.0 0.28 11.4 0.0 2.0 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|73670966|ref|YP_306981.1| - 0.11 13.0 0.0 0.38 11.3 0.0 1.9 1 0 0 1 1 1 0 ABC transporter TrwB_AAD_bind PF10412.9 gi|73670966|ref|YP_306981.1| - 0.12 11.3 0.0 0.22 10.4 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Styelin PF17562.2 gi|73670966|ref|YP_306981.1| - 0.12 12.7 0.0 0.34 11.3 0.0 1.7 1 0 0 1 1 1 0 Styelin TPR_12 PF13424.6 gi|73670967|ref|YP_306982.1| - 9.5e-20 70.7 9.6 3.1e-05 24.2 1.1 4.4 3 1 1 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670967|ref|YP_306982.1| - 1.6e-14 52.8 12.8 0.0017 18.3 0.5 7.3 7 1 1 8 8 8 3 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73670967|ref|YP_306982.1| - 9.7e-14 50.5 15.4 0.0026 17.5 1.4 7.1 6 1 1 7 7 7 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73670967|ref|YP_306982.1| - 1.7e-13 49.9 8.4 3.6e-05 23.5 0.0 5.9 5 1 1 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670967|ref|YP_306982.1| - 6.1e-11 41.6 17.9 0.0093 16.1 1.4 6.5 6 0 0 6 6 5 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73670967|ref|YP_306982.1| - 1.3e-09 38.4 12.1 0.0052 17.3 1.4 5.5 3 1 1 4 4 4 4 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73670967|ref|YP_306982.1| - 4.3e-09 36.4 5.8 0.52 11.1 0.3 6.1 5 1 1 6 6 6 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73670967|ref|YP_306982.1| - 1.1e-08 34.9 0.8 9.1e-05 22.0 0.0 2.7 1 1 1 2 2 2 2 MalT-like TPR region TPR_14 PF13428.6 gi|73670967|ref|YP_306982.1| - 2.7e-08 33.9 6.4 0.29 12.1 0.0 6.7 3 2 3 6 6 6 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670967|ref|YP_306982.1| - 4.3e-07 29.5 16.5 0.089 12.5 1.5 6.1 6 1 0 6 6 6 3 TPR repeat TPR_7 PF13176.6 gi|73670967|ref|YP_306982.1| - 9.3e-06 25.3 9.3 0.76 10.0 0.0 6.3 6 2 1 7 7 7 2 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73670967|ref|YP_306982.1| - 3.7e-05 23.8 10.1 0.28 11.6 0.1 5.4 6 1 0 6 6 5 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670967|ref|YP_306982.1| - 0.00023 21.7 5.7 0.36 11.5 0.5 4.7 3 2 2 5 5 4 2 Tetratricopeptide repeat SNAP PF14938.6 gi|73670967|ref|YP_306982.1| - 0.00042 19.8 6.4 0.11 11.9 0.1 3.1 1 1 1 3 3 3 3 Soluble NSF attachment protein, SNAP SPO22 PF08631.10 gi|73670967|ref|YP_306982.1| - 0.0005 19.6 5.2 0.038 13.5 0.1 2.5 2 0 0 2 2 2 2 Meiosis protein SPO22/ZIP4 like TPR_21 PF09976.9 gi|73670967|ref|YP_306982.1| - 0.00094 18.9 2.7 0.00094 18.9 2.7 3.4 2 2 2 4 4 4 1 Tetratricopeptide repeat-like domain DUF2225 PF09986.9 gi|73670967|ref|YP_306982.1| - 0.0016 18.2 3.0 0.0016 18.2 3.0 1.7 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2225) YfdX PF10938.8 gi|73670967|ref|YP_306982.1| - 0.0022 17.9 12.8 0.072 13.0 1.9 5.0 1 1 3 5 5 5 1 YfdX protein PTS_IIA PF02255.16 gi|73670967|ref|YP_306982.1| - 0.0048 16.9 8.7 0.52 10.4 0.7 3.9 3 1 1 4 4 4 2 PTS system, Lactose/Cellobiose specific IIA subunit Peptidase_M9_N PF08453.10 gi|73670967|ref|YP_306982.1| - 0.046 13.4 1.1 0.077 12.7 1.1 1.4 1 0 0 1 1 1 0 Peptidase family M9 N-terminal MIT PF04212.18 gi|73670967|ref|YP_306982.1| - 0.094 12.8 18.7 0.46 10.6 0.4 5.1 5 0 0 5 5 5 0 MIT (microtubule interacting and transport) domain Fis1_TPR_C PF14853.6 gi|73670967|ref|YP_306982.1| - 0.42 10.7 0.0 0.42 10.7 0.0 4.5 6 0 0 6 6 4 0 Fis1 C-terminal tetratricopeptide repeat RAMP PF04901.13 gi|73670968|ref|YP_306983.1| - 0.011 15.7 0.0 0.02 14.9 0.0 1.4 1 0 0 1 1 1 0 Receptor activity modifying family TraL PF07178.11 gi|73670968|ref|YP_306983.1| - 3.7 8.1 7.8 5 7.6 1.2 2.2 2 0 0 2 2 2 0 TraL protein TPR_10 PF13374.6 gi|73670969|ref|YP_306984.1| - 7.8e-46 152.8 31.9 3.1e-08 33.2 0.3 9.9 9 1 1 10 10 10 6 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73670969|ref|YP_306984.1| - 5.9e-40 135.4 27.1 9.7e-12 45.0 2.0 9.5 5 2 4 9 9 8 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73670969|ref|YP_306984.1| - 1.2e-24 84.4 37.5 0.00053 19.9 0.0 11.5 12 1 0 12 12 12 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73670969|ref|YP_306984.1| - 3.3e-24 83.0 41.2 0.00025 21.0 0.0 11.7 12 0 0 12 12 12 7 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73670969|ref|YP_306984.1| - 2.9e-22 77.5 46.0 0.00067 19.4 0.2 10.8 12 1 0 12 12 11 6 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73670969|ref|YP_306984.1| - 3.3e-19 67.4 23.1 0.0015 18.4 0.0 10.0 10 1 0 10 10 10 5 Tetratricopeptide repeat TPR_21 PF09976.9 gi|73670969|ref|YP_306984.1| - 9.4e-14 51.6 4.0 0.19 11.4 0.0 7.2 4 1 4 8 8 8 4 Tetratricopeptide repeat-like domain TPR_14 PF13428.6 gi|73670969|ref|YP_306984.1| - 9.6e-14 50.9 4.8 4 8.5 0.0 8.9 9 0 0 9 9 7 1 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73670969|ref|YP_306984.1| - 7.2e-11 41.7 12.5 0.75 10.3 0.0 7.8 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73670969|ref|YP_306984.1| - 2e-09 38.0 1.7 24 5.7 0.0 7.6 6 1 2 8 8 7 0 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73670969|ref|YP_306984.1| - 8e-08 31.8 35.4 0.96 9.2 0.2 10.2 8 4 3 11 11 11 5 TPR repeat TPR_MalT PF17874.1 gi|73670969|ref|YP_306984.1| - 5.7e-07 29.2 16.1 0.0077 15.6 0.6 4.7 2 1 3 5 5 5 4 MalT-like TPR region TOM20_plant PF06552.12 gi|73670969|ref|YP_306984.1| - 2e-06 27.7 3.2 0.24 11.1 0.0 4.8 1 1 2 4 4 4 2 Plant specific mitochondrial import receptor subunit TOM20 TPR_6 PF13174.6 gi|73670969|ref|YP_306984.1| - 2.2e-06 27.9 18.1 11 6.9 0.0 9.7 11 0 0 11 11 10 0 Tetratricopeptide repeat CN_hydrolase PF00795.22 gi|73670969|ref|YP_306984.1| - 9.1e-06 25.2 0.0 2.2e-05 24.0 0.0 1.6 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase TPR_19 PF14559.6 gi|73670969|ref|YP_306984.1| - 3.9e-05 24.1 28.6 0.19 12.2 0.2 9.2 5 1 7 12 12 10 4 Tetratricopeptide repeat TPR_4 PF07721.14 gi|73670969|ref|YP_306984.1| - 7.7e-05 22.9 0.0 82 4.3 0.0 5.6 5 0 0 5 5 5 0 Tetratricopeptide repeat YfdX PF10938.8 gi|73670969|ref|YP_306984.1| - 0.004 17.1 2.3 0.24 11.3 1.5 4.0 6 1 0 6 6 4 1 YfdX protein Fis1_TPR_C PF14853.6 gi|73670969|ref|YP_306984.1| - 0.01 15.9 21.0 1.4 9.0 0.3 7.2 8 0 0 8 8 7 0 Fis1 C-terminal tetratricopeptide repeat Rapsyn_N PF10579.9 gi|73670969|ref|YP_306984.1| - 0.015 15.4 3.8 0.061 13.4 0.1 3.9 5 0 0 5 5 5 0 Rapsyn N-terminal myristoylation and linker region GST_C_2 PF13410.6 gi|73670969|ref|YP_306984.1| - 0.14 12.2 0.0 1.9e+02 2.1 0.0 4.1 4 0 0 4 4 3 0 Glutathione S-transferase, C-terminal domain Sgf11_N PF18519.1 gi|73670969|ref|YP_306984.1| - 3 7.5 5.1 94 2.7 0.2 3.5 3 0 0 3 3 3 0 SAGA-associated factor 11 N-terminal domain PAS_3 PF08447.12 gi|73670970|ref|YP_306985.1| - 5.7e-20 71.4 0.1 1e-19 70.6 0.1 1.4 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|73670970|ref|YP_306985.1| - 4.1e-05 23.8 0.1 7.3e-05 23.0 0.1 1.4 1 0 0 1 1 1 1 PAS domain DivIVA PF05103.13 gi|73670970|ref|YP_306985.1| - 0.0012 18.9 1.5 0.0025 17.9 1.5 1.5 1 0 0 1 1 1 1 DivIVA protein HALZ PF02183.18 gi|73670970|ref|YP_306985.1| - 0.024 14.9 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Homeobox associated leucine zipper betaPIX_CC PF16523.5 gi|73670970|ref|YP_306985.1| - 0.031 14.1 0.4 0.069 13.0 0.4 1.6 1 0 0 1 1 1 0 betaPIX coiled coil PAS PF00989.25 gi|73670970|ref|YP_306985.1| - 0.071 13.1 0.3 0.26 11.3 0.0 1.8 1 1 1 2 2 2 0 PAS fold YabA PF06156.13 gi|73670970|ref|YP_306985.1| - 0.15 12.7 1.6 0.16 12.6 0.5 1.6 2 0 0 2 2 2 0 Initiation control protein YabA Cnn_1N PF07989.11 gi|73670970|ref|YP_306985.1| - 0.38 10.9 3.3 0.29 11.3 1.6 1.7 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 HisKA_2 PF07568.12 gi|73670972|ref|YP_306987.1| - 1.2e-32 111.8 0.6 1.2e-32 111.8 0.6 2.9 3 0 0 3 3 2 1 Histidine kinase PAS_3 PF08447.12 gi|73670972|ref|YP_306987.1| - 2.2e-28 98.4 0.1 1.8e-19 69.8 0.1 3.5 2 1 0 2 2 2 2 PAS fold PAS_9 PF13426.7 gi|73670972|ref|YP_306987.1| - 1.4e-23 83.1 1.4 7.5e-16 58.3 0.0 3.8 3 1 0 3 3 3 2 PAS domain PAS PF00989.25 gi|73670972|ref|YP_306987.1| - 7.2e-17 61.4 0.8 4.7e-13 49.1 0.0 3.2 3 1 0 3 3 2 2 PAS fold GAF_2 PF13185.6 gi|73670972|ref|YP_306987.1| - 2.3e-14 53.8 0.0 4.7e-14 52.9 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|73670972|ref|YP_306987.1| - 1.6e-12 47.9 0.0 3.8e-12 46.7 0.0 1.7 1 0 0 1 1 1 1 GAF domain PAS_8 PF13188.7 gi|73670972|ref|YP_306987.1| - 4.6e-12 45.7 0.0 6.1e-11 42.1 0.0 2.6 2 0 0 2 2 2 1 PAS domain GAF PF01590.26 gi|73670972|ref|YP_306987.1| - 7.9e-12 45.9 0.0 1.4e-11 45.1 0.0 1.5 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.10 gi|73670972|ref|YP_306987.1| - 4.3e-10 39.8 0.0 1.3e-07 31.8 0.0 3.3 3 2 1 4 4 2 1 PAS fold HATPase_c PF02518.26 gi|73670972|ref|YP_306987.1| - 1.5e-08 35.1 0.2 1e-07 32.4 0.2 2.3 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|73670972|ref|YP_306987.1| - 0.00022 21.9 1.1 0.00056 20.6 0.1 2.3 2 0 0 2 2 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|73670972|ref|YP_306987.1| - 0.00035 20.5 0.0 0.00081 19.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_7 PF12860.7 gi|73670972|ref|YP_306987.1| - 0.0047 17.1 0.1 0.22 11.7 0.0 2.9 3 0 0 3 3 3 1 PAS fold SPOB_a PF14689.6 gi|73670972|ref|YP_306987.1| - 0.019 14.6 0.1 0.21 11.3 0.0 2.8 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain Autoind_bind PF03472.15 gi|73670972|ref|YP_306987.1| - 0.076 12.5 0.0 0.17 11.3 0.0 1.6 1 0 0 1 1 1 0 Autoinducer binding domain DUF2703 PF10865.8 gi|73670972|ref|YP_306987.1| - 0.088 13.0 1.4 1.1 9.4 0.1 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF2703) HALZ PF02183.18 gi|73670972|ref|YP_306987.1| - 0.098 12.9 8.2 0.12 12.6 0.2 3.2 2 1 0 2 2 2 0 Homeobox associated leucine zipper DivIVA PF05103.13 gi|73670972|ref|YP_306987.1| - 0.12 12.4 0.1 0.12 12.4 0.1 3.8 4 0 0 4 4 4 0 DivIVA protein DUF1835 PF08874.10 gi|73670972|ref|YP_306987.1| - 0.13 12.5 0.9 28 4.9 0.2 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF1835) BON PF04972.17 gi|73670972|ref|YP_306987.1| - 0.13 12.5 0.0 0.37 11.1 0.0 1.7 1 0 0 1 1 1 0 BON domain H_kinase_N PF12282.8 gi|73670972|ref|YP_306987.1| - 0.14 12.1 0.0 0.4 10.6 0.0 1.7 1 0 0 1 1 1 0 Signal transduction histidine kinase DUF1664 PF07889.12 gi|73670972|ref|YP_306987.1| - 1.1 9.3 6.5 0.31 11.1 0.2 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) Med9 PF07544.13 gi|73670972|ref|YP_306987.1| - 5 7.3 11.5 1.6 8.9 0.2 3.6 3 0 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 Spectrin PF00435.21 gi|73670972|ref|YP_306987.1| - 6.5 7.3 13.2 26 5.3 0.3 4.2 4 0 0 4 4 4 0 Spectrin repeat zinc_ribbon_13 PF09855.9 gi|73670973|ref|YP_306988.1| - 1.3e-29 102.1 1.8 1.5e-29 101.9 1.8 1.0 1 0 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Ribosomal_L37e PF01907.19 gi|73670973|ref|YP_306988.1| - 0.00049 20.2 5.4 0.096 12.9 0.1 2.1 1 1 1 2 2 2 2 Ribosomal protein L37e Zn_Tnp_IS1595 PF12760.7 gi|73670973|ref|YP_306988.1| - 0.0028 17.6 4.2 0.011 15.6 4.6 1.7 1 1 1 2 2 2 1 Transposase zinc-ribbon domain CpXC PF14353.6 gi|73670973|ref|YP_306988.1| - 0.0034 17.4 0.4 1 9.4 0.0 2.0 2 0 0 2 2 2 2 CpXC protein Zn_ribbon_SprT PF17283.2 gi|73670973|ref|YP_306988.1| - 0.0054 16.6 0.8 0.95 9.4 0.1 2.1 2 0 0 2 2 2 1 SprT-like zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|73670973|ref|YP_306988.1| - 0.0061 16.1 0.5 0.17 11.4 0.2 2.1 2 0 0 2 2 2 1 TFIIB zinc-binding zinc_ribbon_10 PF10058.9 gi|73670973|ref|YP_306988.1| - 0.0064 16.2 0.5 0.43 10.3 0.1 2.2 2 0 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein zf-trcl PF13451.6 gi|73670973|ref|YP_306988.1| - 0.0097 15.8 1.3 2.8 7.9 0.1 2.2 2 0 0 2 2 2 2 Probable zinc-ribbon domain DUF1610 PF07754.11 gi|73670973|ref|YP_306988.1| - 0.011 15.7 0.7 0.021 14.8 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1610) Mcm10 PF09332.11 gi|73670973|ref|YP_306988.1| - 0.016 14.7 0.5 0.058 12.8 0.1 1.8 2 0 0 2 2 2 0 Mcm10 replication factor zf-Mss51 PF13824.6 gi|73670973|ref|YP_306988.1| - 0.02 15.0 0.4 0.13 12.4 0.1 2.0 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 TFIIS_C PF01096.18 gi|73670973|ref|YP_306988.1| - 0.022 14.6 1.7 2.4 8.1 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) A2L_zn_ribbon PF08792.10 gi|73670973|ref|YP_306988.1| - 0.025 14.3 0.9 1 9.2 0.1 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-C2H2_3 PF13878.6 gi|73670973|ref|YP_306988.1| - 0.028 14.2 1.4 0.3 11.0 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO RNA_POL_M_15KD PF02150.16 gi|73670973|ref|YP_306988.1| - 0.029 14.2 1.2 2.9 7.8 0.1 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf-3CxxC PF13695.6 gi|73670973|ref|YP_306988.1| - 0.048 14.1 0.0 0.057 13.9 0.0 1.1 1 0 0 1 1 1 0 Zinc-binding domain Ribosomal_L32p PF01783.23 gi|73670973|ref|YP_306988.1| - 0.058 13.7 0.5 3.5 8.0 0.1 2.1 2 0 0 2 2 2 0 Ribosomal L32p protein family Flu_PA PF00603.17 gi|73670973|ref|YP_306988.1| - 0.096 10.8 0.0 0.1 10.7 0.0 1.0 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PA zf-ACC PF17848.1 gi|73670973|ref|YP_306988.1| - 0.098 12.8 2.1 0.5 10.5 0.2 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf_UBZ PF18439.1 gi|73670973|ref|YP_306988.1| - 0.13 11.9 3.1 2.5 7.8 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger FUR PF01475.19 gi|73670973|ref|YP_306988.1| - 0.28 11.4 2.2 7.3 6.8 0.2 2.1 1 1 1 2 2 2 0 Ferric uptake regulator family OrfB_Zn_ribbon PF07282.11 gi|73670973|ref|YP_306988.1| - 0.32 11.0 2.9 10 6.1 0.2 2.1 1 1 0 2 2 2 0 Putative transposase DNA-binding domain ig PF00047.25 gi|73670974|ref|YP_306989.1| - 0.15 12.3 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin domain PALP PF00291.25 gi|73670975|ref|YP_306990.1| - 3.8e-37 128.3 0.0 4.8e-37 128.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TPP_enzyme_C PF02775.21 gi|73670976|ref|YP_306991.1| - 1.4e-18 67.2 0.0 5.2e-18 65.3 0.0 2.0 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.18 gi|73670976|ref|YP_306991.1| - 9.2e-11 41.6 0.0 1.7e-09 37.5 0.0 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Peptidase_M73 PF12389.8 gi|73670977|ref|YP_306992.1| - 0.013 15.3 2.2 1.5 8.6 0.1 2.4 2 1 0 2 2 2 0 Camelysin metallo-endopeptidase Fungal_TACC PF12709.7 gi|73670977|ref|YP_306992.1| - 0.06 13.8 0.8 0.16 12.5 0.8 1.7 1 0 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins Mrr_cat PF04471.12 gi|73670977|ref|YP_306992.1| - 0.14 12.2 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 Restriction endonuclease AbiJ_NTD4 PF18863.1 gi|73670978|ref|YP_306993.1| - 0.015 15.7 3.8 0.025 15.0 3.8 1.4 1 0 0 1 1 1 0 AbiJ N-terminal domain 4 AAA_23 PF13476.6 gi|73670979|ref|YP_306994.1| - 2.7e-05 24.8 53.6 3.7e-05 24.3 32.4 3.6 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|73670979|ref|YP_306994.1| - 8.9e-05 22.0 0.1 8.9e-05 22.0 0.1 2.9 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73670979|ref|YP_306994.1| - 0.0019 18.1 0.7 0.0019 18.1 0.7 3.2 3 2 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_27 PF13514.6 gi|73670979|ref|YP_306994.1| - 0.0087 15.7 0.1 0.028 14.0 0.1 1.8 1 0 0 1 1 1 1 AAA domain PIN7 PF18475.1 gi|73670979|ref|YP_306994.1| - 0.018 15.6 0.3 0.1 13.3 0.1 2.5 2 0 0 2 2 2 0 PIN domain GlutR_dimer PF00745.20 gi|73670979|ref|YP_306994.1| - 4.1 7.9 11.2 0.19 12.2 0.5 3.2 4 0 0 4 4 4 0 Glutamyl-tRNAGlu reductase, dimerisation domain DUF489 PF04356.12 gi|73670979|ref|YP_306994.1| - 6.9 6.6 7.1 4.3 7.3 2.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF489) HcyBio PF01837.16 gi|73670980|ref|YP_306995.1| - 1.5e-107 359.5 0.0 1.7e-107 359.3 0.0 1.0 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation Fer4_2 PF12797.7 gi|73670980|ref|YP_306995.1| - 0.00011 22.0 10.1 0.0072 16.4 1.2 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73670980|ref|YP_306995.1| - 0.00016 21.8 8.7 0.0003 20.9 8.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73670980|ref|YP_306995.1| - 0.00021 21.3 9.3 0.00044 20.3 9.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|73670980|ref|YP_306995.1| - 0.0015 18.2 12.7 0.0075 16.0 0.6 3.3 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|73670980|ref|YP_306995.1| - 0.0028 18.2 10.2 0.022 15.4 10.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|73670980|ref|YP_306995.1| - 0.0067 16.5 2.6 0.0067 16.5 2.6 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.6 gi|73670980|ref|YP_306995.1| - 0.092 13.0 2.5 0.18 12.0 2.5 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73670980|ref|YP_306995.1| - 0.11 12.7 9.6 0.73 10.0 9.6 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|73670980|ref|YP_306995.1| - 0.91 10.5 9.3 5.8 7.9 1.4 2.5 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|73670980|ref|YP_306995.1| - 1.1 9.8 8.9 4.4 7.8 0.7 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|73670980|ref|YP_306995.1| - 4.7 8.0 11.8 11 6.8 2.2 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|73670980|ref|YP_306995.1| - 6.8 7.3 12.9 5.2 7.7 2.2 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain Lactamase_B PF00753.27 gi|73670981|ref|YP_306996.1| - 5.4e-21 75.5 0.0 8.6e-21 74.8 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|73670981|ref|YP_306996.1| - 1.6e-05 24.5 0.0 2.7e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|73670981|ref|YP_306996.1| - 0.0025 17.3 0.0 0.0037 16.7 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|73670981|ref|YP_306996.1| - 0.022 14.6 0.0 0.035 14.0 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain PAS_4 PF08448.10 gi|73670981|ref|YP_306996.1| - 0.061 13.6 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 PAS fold ThiS PF02597.20 gi|73670982|ref|YP_306997.1| - 0.00011 22.7 0.5 0.00014 22.4 0.5 1.2 1 0 0 1 1 1 1 ThiS family HTH_34 PF13601.6 gi|73670983|ref|YP_306998.1| - 0.012 15.8 0.0 0.026 14.7 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain DSPc PF00782.20 gi|73670983|ref|YP_306998.1| - 0.025 14.4 0.6 0.12 12.2 0.1 2.0 1 1 1 2 2 2 0 Dual specificity phosphatase, catalytic domain TrmB PF01978.19 gi|73670983|ref|YP_306998.1| - 0.061 13.2 0.1 0.14 12.0 0.0 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB ABC_tran PF00005.27 gi|73670984|ref|YP_306999.1| - 1.2e-63 213.7 0.0 2.4e-31 109.0 0.0 2.5 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|73670984|ref|YP_306999.1| - 1e-13 51.3 1.4 2e-05 24.2 0.1 3.6 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|73670984|ref|YP_306999.1| - 6.3e-13 49.2 11.1 9.7e-05 22.3 0.2 4.2 3 1 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|73670984|ref|YP_306999.1| - 1.5e-10 41.7 0.4 3.6e-06 27.5 0.0 2.7 2 1 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|73670984|ref|YP_306999.1| - 3.9e-08 33.4 0.1 0.00031 20.7 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_22 PF13401.6 gi|73670984|ref|YP_306999.1| - 4.4e-08 33.5 2.0 0.00019 21.7 0.3 3.4 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|73670984|ref|YP_306999.1| - 2.1e-07 30.6 0.1 0.0026 17.5 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|73670984|ref|YP_306999.1| - 4.9e-07 29.5 0.1 0.023 14.3 0.0 3.7 4 0 0 4 4 4 2 AAA domain AAA_23 PF13476.6 gi|73670984|ref|YP_306999.1| - 1.2e-06 29.2 3.1 0.0053 17.3 0.2 2.9 2 1 0 2 2 2 2 AAA domain AAA_15 PF13175.6 gi|73670984|ref|YP_306999.1| - 2e-06 27.8 1.0 0.037 13.7 0.0 3.1 2 2 0 3 3 3 2 AAA ATPase domain AAA PF00004.29 gi|73670984|ref|YP_306999.1| - 6e-06 26.7 1.7 0.067 13.6 0.0 3.9 3 1 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|73670984|ref|YP_306999.1| - 2.3e-05 24.4 0.0 0.00033 20.6 0.0 2.7 3 0 0 3 3 3 1 Rad17 P-loop domain AAA_5 PF07728.14 gi|73670984|ref|YP_306999.1| - 2.7e-05 24.2 1.6 0.0089 16.0 0.1 3.2 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|73670984|ref|YP_306999.1| - 3.1e-05 24.5 0.6 0.054 14.1 0.0 3.8 4 0 0 4 4 4 1 AAA domain Mg_chelatase PF01078.21 gi|73670984|ref|YP_306999.1| - 5.6e-05 22.6 0.1 0.0072 15.7 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|73670984|ref|YP_306999.1| - 6.6e-05 23.1 0.2 0.13 12.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|73670984|ref|YP_306999.1| - 0.00012 21.9 1.1 1.6 8.5 0.0 3.8 4 0 0 4 4 4 1 IstB-like ATP binding protein ABC_ATPase PF09818.9 gi|73670984|ref|YP_306999.1| - 0.00013 20.9 0.0 0.57 8.9 0.0 3.4 3 0 0 3 3 3 1 Predicted ATPase of the ABC class NACHT PF05729.12 gi|73670984|ref|YP_306999.1| - 0.00015 21.7 1.6 0.51 10.2 0.0 3.2 3 0 0 3 3 3 2 NACHT domain AAA_30 PF13604.6 gi|73670984|ref|YP_306999.1| - 0.0003 20.5 0.0 0.42 10.3 0.0 2.7 2 1 0 2 2 2 2 AAA domain NB-ARC PF00931.22 gi|73670984|ref|YP_306999.1| - 0.00032 20.0 0.2 0.1 11.8 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain TsaE PF02367.17 gi|73670984|ref|YP_306999.1| - 0.00039 20.4 0.1 1.2 9.1 0.0 2.6 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|73670984|ref|YP_306999.1| - 0.00046 20.0 2.9 2.4 7.8 0.0 4.2 5 0 0 5 5 4 1 AAA domain RNA_helicase PF00910.22 gi|73670984|ref|YP_306999.1| - 0.0017 18.7 0.1 0.35 11.3 0.0 2.5 2 0 0 2 2 2 1 RNA helicase AAA_7 PF12775.7 gi|73670984|ref|YP_306999.1| - 0.0037 16.8 0.1 0.11 12.1 0.0 2.6 3 0 0 3 3 3 1 P-loop containing dynein motor region SRP54 PF00448.22 gi|73670984|ref|YP_306999.1| - 0.006 16.2 0.0 0.71 9.5 0.0 2.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain G-alpha PF00503.20 gi|73670984|ref|YP_306999.1| - 0.007 15.6 0.1 0.39 9.8 0.0 2.3 2 0 0 2 2 2 1 G-protein alpha subunit AAA_28 PF13521.6 gi|73670984|ref|YP_306999.1| - 0.0071 16.6 0.6 0.76 10.0 0.0 2.7 3 0 0 3 3 2 1 AAA domain MMR_HSR1 PF01926.23 gi|73670984|ref|YP_306999.1| - 0.008 16.3 0.1 1.7 8.8 0.1 2.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase SbcCD_C PF13558.6 gi|73670984|ref|YP_306999.1| - 0.0081 16.4 0.2 1.4 9.2 0.1 3.3 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit DUF815 PF05673.13 gi|73670984|ref|YP_306999.1| - 0.0083 15.3 0.0 0.079 12.1 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_14 PF13173.6 gi|73670984|ref|YP_306999.1| - 0.0088 16.1 0.1 4.4 7.3 0.0 3.0 2 1 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 gi|73670984|ref|YP_306999.1| - 0.011 15.5 0.1 1.3 8.8 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation T2SSE PF00437.20 gi|73670984|ref|YP_306999.1| - 0.013 14.6 0.0 1.7 7.6 0.0 2.7 3 0 0 3 3 3 0 Type II/IV secretion system protein TniB PF05621.11 gi|73670984|ref|YP_306999.1| - 0.014 14.8 2.2 7.1 6.0 0.0 4.4 5 0 0 5 5 5 0 Bacterial TniB protein MobB PF03205.14 gi|73670984|ref|YP_306999.1| - 0.028 14.3 0.0 7.7 6.4 0.0 2.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ATP_bind_1 PF03029.17 gi|73670984|ref|YP_306999.1| - 0.035 13.9 0.2 9.9 5.9 0.0 3.2 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein AAA_27 PF13514.6 gi|73670984|ref|YP_306999.1| - 0.041 13.5 0.1 1.6 8.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|73670984|ref|YP_306999.1| - 0.043 13.7 0.4 1.3 8.9 0.0 2.7 3 0 0 3 3 2 0 ATPase domain predominantly from Archaea Roc PF08477.13 gi|73670984|ref|YP_306999.1| - 0.046 14.0 0.2 13 6.1 0.1 2.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ATPase PF06745.13 gi|73670984|ref|YP_306999.1| - 0.073 12.4 1.2 12 5.2 0.0 3.5 4 0 0 4 4 4 0 KaiC Sigma54_activat PF00158.26 gi|73670984|ref|YP_306999.1| - 0.077 12.7 0.0 3.6 7.2 0.0 3.1 3 0 0 3 3 3 0 Sigma-54 interaction domain NTPase_1 PF03266.15 gi|73670984|ref|YP_306999.1| - 0.083 12.8 1.4 11 5.8 0.0 3.3 3 0 0 3 3 3 0 NTPase Zeta_toxin PF06414.12 gi|73670984|ref|YP_306999.1| - 0.092 12.0 0.0 3.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Zeta toxin Adeno_IVa2 PF02456.15 gi|73670984|ref|YP_306999.1| - 0.1 11.4 0.0 0.29 9.9 0.0 1.7 2 0 0 2 2 1 0 Adenovirus IVa2 protein AAA_19 PF13245.6 gi|73670984|ref|YP_306999.1| - 0.22 11.8 0.6 13 6.2 0.0 3.0 3 0 0 3 3 3 0 AAA domain cobW PF02492.19 gi|73670984|ref|YP_306999.1| - 0.5 9.9 2.6 22 4.6 0.1 3.0 4 0 0 4 4 3 0 CobW/HypB/UreG, nucleotide-binding domain CbiQ PF02361.16 gi|73670985|ref|YP_307000.1| - 2.2e-25 89.5 12.6 5.4e-25 88.3 12.6 1.6 1 1 0 1 1 1 1 Cobalt transport protein DUF3344 PF11824.8 gi|73670986|ref|YP_307001.1| - 1.6e-68 231.4 8.6 2e-68 231.0 8.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) DUF3344 PF11824.8 gi|73670987|ref|YP_307002.1| - 2e-47 162.1 1.6 5.5e-47 160.7 1.6 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|73670987|ref|YP_307002.1| - 1.5e-36 124.7 2.1 2.1e-17 63.3 1.0 2.6 2 0 0 2 2 2 2 CARDB Lysyl_oxidase PF01186.17 gi|73670987|ref|YP_307002.1| - 1.5e-05 24.7 0.7 0.0069 16.1 0.0 2.3 2 0 0 2 2 2 2 Lysyl oxidase DUF4973 PF16343.5 gi|73670987|ref|YP_307002.1| - 0.11 12.6 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4973) EF-hand_5 PF13202.6 gi|73670987|ref|YP_307002.1| - 1.4 8.6 3.8 3.3 7.4 3.8 1.6 1 0 0 1 1 1 0 EF hand DUF3344 PF11824.8 gi|73670988|ref|YP_307003.1| - 5e-70 236.3 5.9 5.6e-70 236.1 5.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) ABC_tran PF00005.27 gi|73670989|ref|YP_307004.1| - 2.3e-33 115.6 0.0 3.9e-33 114.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|73670989|ref|YP_307004.1| - 4.2e-07 29.6 0.9 3.3e-05 23.4 0.9 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|73670989|ref|YP_307004.1| - 2e-05 24.2 0.0 0.00069 19.3 0.0 2.3 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|73670989|ref|YP_307004.1| - 8.6e-05 22.5 0.1 0.034 14.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|73670989|ref|YP_307004.1| - 0.00023 21.1 0.0 0.00044 20.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|73670989|ref|YP_307004.1| - 0.00088 19.7 0.0 0.0012 19.3 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 gi|73670989|ref|YP_307004.1| - 0.025 14.3 0.0 0.027 14.2 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 gi|73670989|ref|YP_307004.1| - 0.03 14.4 1.0 0.31 11.1 1.0 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase G-alpha PF00503.20 gi|73670989|ref|YP_307004.1| - 0.037 13.2 0.0 0.042 13.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit T2SSE PF00437.20 gi|73670989|ref|YP_307004.1| - 0.044 12.8 0.0 0.068 12.2 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_23 PF13476.6 gi|73670989|ref|YP_307004.1| - 0.089 13.3 0.2 0.17 12.4 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|73670989|ref|YP_307004.1| - 0.11 12.7 0.8 0.36 11.0 0.8 1.9 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|73670989|ref|YP_307004.1| - 0.18 10.4 0.0 5.5 5.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain TssO PF17561.2 gi|73670991|ref|YP_307006.1| - 0.0019 18.3 2.8 0.004 17.3 2.8 1.4 1 1 0 1 1 1 1 Type VI secretion system, TssO DUF4577 PF15145.6 gi|73670991|ref|YP_307006.1| - 0.0031 17.5 0.1 0.0033 17.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4577) TraL PF07178.11 gi|73670991|ref|YP_307006.1| - 0.059 13.8 0.3 0.059 13.8 0.3 1.1 1 0 0 1 1 1 0 TraL protein DivIC PF04977.15 gi|73670991|ref|YP_307006.1| - 0.062 13.1 0.0 0.074 12.8 0.0 1.1 1 0 0 1 1 1 0 Septum formation initiator KxDL PF10241.9 gi|73670991|ref|YP_307006.1| - 0.092 13.0 0.4 0.11 12.8 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein DUF948 PF06103.11 gi|73670991|ref|YP_307006.1| - 0.092 13.0 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) MSP1a PF11670.8 gi|73670991|ref|YP_307006.1| - 0.2 10.9 0.0 0.22 10.8 0.0 1.0 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) HTH_5 PF01022.20 gi|73670992|ref|YP_307007.1| - 5.5e-14 51.8 0.3 7.9e-14 51.3 0.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|73670992|ref|YP_307007.1| - 3.4e-12 46.3 0.3 5.2e-12 45.6 0.3 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|73670992|ref|YP_307007.1| - 4.3e-07 29.7 0.2 6.1e-07 29.2 0.2 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|73670992|ref|YP_307007.1| - 7.6e-07 28.6 0.3 1.7e-06 27.5 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|73670992|ref|YP_307007.1| - 1.5e-06 28.0 0.3 2e-06 27.6 0.3 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|73670992|ref|YP_307007.1| - 3.4e-06 26.9 0.0 5.5e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 MarR family PadR PF03551.14 gi|73670992|ref|YP_307007.1| - 6.3e-06 26.1 0.8 9.4e-05 22.3 0.8 2.1 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_11 PF08279.12 gi|73670992|ref|YP_307007.1| - 1.3e-05 25.1 0.2 2.2e-05 24.3 0.2 1.4 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.20 gi|73670992|ref|YP_307007.1| - 0.0013 19.1 0.1 0.0018 18.6 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_34 PF13601.6 gi|73670992|ref|YP_307007.1| - 0.0021 18.2 0.2 0.0029 17.8 0.2 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|73670992|ref|YP_307007.1| - 0.0034 17.3 0.1 0.005 16.8 0.1 1.4 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|73670992|ref|YP_307007.1| - 0.015 15.0 0.0 0.026 14.3 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain HTH_29 PF13551.6 gi|73670992|ref|YP_307007.1| - 0.015 15.3 0.0 0.03 14.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_26 PF13443.6 gi|73670992|ref|YP_307007.1| - 0.017 15.5 0.2 0.17 12.3 0.1 2.3 2 1 1 3 3 3 0 Cro/C1-type HTH DNA-binding domain Fe_dep_repress PF01325.19 gi|73670992|ref|YP_307007.1| - 0.032 14.4 0.1 0.063 13.5 0.1 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_41 PF14502.6 gi|73670992|ref|YP_307007.1| - 0.043 13.5 0.0 0.14 11.8 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HxlR PF01638.17 gi|73670992|ref|YP_307007.1| - 0.05 13.4 0.2 0.066 13.1 0.2 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix GntR PF00392.21 gi|73670992|ref|YP_307007.1| - 0.059 13.0 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Mga PF05043.13 gi|73670992|ref|YP_307007.1| - 0.066 13.8 0.2 0.1 13.2 0.2 1.6 1 1 0 1 1 1 0 Mga helix-turn-helix domain HTH_36 PF13730.6 gi|73670992|ref|YP_307007.1| - 0.075 13.0 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain NUMOD1 PF07453.13 gi|73670992|ref|YP_307007.1| - 0.16 12.3 0.0 1 9.7 0.0 2.1 2 0 0 2 2 2 0 NUMOD1 domain NAS PF03059.16 gi|73670993|ref|YP_307008.1| - 8.3e-77 258.2 0.0 9.9e-77 258.0 0.0 1.0 1 0 0 1 1 1 1 Nicotianamine synthase protein DUF2113 PF09886.9 gi|73670993|ref|YP_307008.1| - 0.12 11.8 0.0 0.26 10.6 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2113) GyrI-like PF06445.15 gi|73670994|ref|YP_307009.1| - 2.5e-23 83.1 0.1 3.4e-23 82.7 0.1 1.2 1 0 0 1 1 1 1 GyrI-like small molecule binding domain MerR_1 PF13411.6 gi|73670994|ref|YP_307009.1| - 2.1e-10 40.5 0.0 3.9e-10 39.7 0.0 1.5 1 0 0 1 1 1 1 MerR HTH family regulatory protein Cass2 PF14526.6 gi|73670994|ref|YP_307009.1| - 1.7e-09 38.0 0.1 3.3e-09 37.1 0.1 1.5 1 0 0 1 1 1 1 Integron-associated effector binding protein MerR PF00376.23 gi|73670994|ref|YP_307009.1| - 1.3e-07 31.2 0.1 2.7e-07 30.2 0.1 1.6 1 0 0 1 1 1 1 MerR family regulatory protein MerR-DNA-bind PF09278.11 gi|73670994|ref|YP_307009.1| - 0.033 14.7 0.1 0.065 13.8 0.1 1.5 1 0 0 1 1 1 0 MerR, DNA binding Pyr_redox_2 PF07992.14 gi|73670995|ref|YP_307010.1| - 8.4e-52 176.2 0.3 1.2e-51 175.8 0.3 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|73670995|ref|YP_307010.1| - 3.6e-16 59.5 5.3 2e-15 57.1 0.1 3.3 4 0 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|73670995|ref|YP_307010.1| - 2.5e-14 53.4 0.0 6.6e-14 52.1 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|73670995|ref|YP_307010.1| - 4.9e-12 45.7 5.0 1.2e-10 41.2 0.2 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|73670995|ref|YP_307010.1| - 4.6e-05 22.3 1.2 0.2 10.3 0.3 2.9 2 1 1 3 3 3 2 HI0933-like protein Lycopene_cycl PF05834.12 gi|73670995|ref|YP_307010.1| - 0.00012 21.3 0.1 0.0022 17.1 0.1 2.3 2 0 0 2 2 2 1 Lycopene cyclase protein FAD_binding_2 PF00890.24 gi|73670995|ref|YP_307010.1| - 0.00027 20.1 2.0 0.005 16.0 0.4 2.2 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 gi|73670995|ref|YP_307010.1| - 0.0019 17.5 1.5 0.0075 15.5 0.1 2.6 2 1 1 3 3 3 1 Thi4 family FAD_binding_3 PF01494.19 gi|73670995|ref|YP_307010.1| - 0.0035 16.7 0.1 2 7.6 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain 3HCDH_N PF02737.18 gi|73670995|ref|YP_307010.1| - 0.0044 16.9 0.3 0.34 10.8 0.0 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GDI PF00996.18 gi|73670995|ref|YP_307010.1| - 0.0068 15.0 0.2 0.016 13.7 0.0 1.7 2 0 0 2 2 2 1 GDP dissociation inhibitor NAD_binding_8 PF13450.6 gi|73670995|ref|YP_307010.1| - 0.01 16.0 3.5 1.1 9.5 0.9 3.1 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 gi|73670995|ref|YP_307010.1| - 0.042 14.1 2.0 0.35 11.1 0.2 2.9 3 0 0 3 3 3 0 TrkA-N domain GIDA PF01134.22 gi|73670995|ref|YP_307010.1| - 0.049 12.7 2.7 1.7 7.6 0.0 2.6 2 1 0 2 2 2 0 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|73670995|ref|YP_307010.1| - 0.06 12.6 1.4 3.7 6.8 0.1 3.1 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|73670995|ref|YP_307010.1| - 0.066 12.6 0.3 2.6 7.4 0.1 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XdhC_C PF13478.6 gi|73670995|ref|YP_307010.1| - 0.1 13.1 0.0 16 6.0 0.0 2.4 2 0 0 2 2 2 0 XdhC Rossmann domain DAO PF01266.24 gi|73670995|ref|YP_307010.1| - 0.14 11.7 4.5 7.1 6.1 0.0 2.6 2 1 1 3 3 3 0 FAD dependent oxidoreductase Amino_oxidase PF01593.24 gi|73670995|ref|YP_307010.1| - 0.15 11.3 0.0 0.27 10.5 0.0 1.4 1 1 0 1 1 1 0 Flavin containing amine oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|73670995|ref|YP_307010.1| - 0.64 10.3 2.3 40 4.5 0.0 2.8 3 0 0 3 3 3 0 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|73670995|ref|YP_307010.1| - 0.67 10.6 5.8 1.4 9.6 1.0 3.1 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent PGK PF00162.19 gi|73670996|ref|YP_307011.1| - 1.3e-110 369.9 0.4 1.5e-110 369.7 0.4 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Rubrerythrin PF02915.17 gi|73670997|ref|YP_307012.1| - 7.3e-24 84.7 4.4 1e-23 84.2 4.4 1.2 1 0 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|73670997|ref|YP_307012.1| - 0.017 15.1 4.4 0.088 12.7 4.5 1.9 1 1 0 1 1 1 0 Ferritin-like domain DZR PF12773.7 gi|73670997|ref|YP_307012.1| - 0.066 13.3 0.3 0.1 12.6 0.3 1.3 1 0 0 1 1 1 0 Double zinc ribbon RecR PF02132.15 gi|73670997|ref|YP_307012.1| - 0.067 12.8 0.6 0.15 11.6 0.6 1.5 1 0 0 1 1 1 0 RecR protein NRDD PF13597.6 gi|73670997|ref|YP_307012.1| - 0.11 11.3 0.3 0.18 10.6 0.3 1.3 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase TF_Zn_Ribbon PF08271.12 gi|73670997|ref|YP_307012.1| - 0.14 11.7 1.3 5.8 6.5 0.2 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|73670997|ref|YP_307012.1| - 0.18 11.5 0.6 0.35 10.6 0.6 1.5 1 0 0 1 1 1 0 zinc-ribbon domain Rubredoxin PF00301.20 gi|73670997|ref|YP_307012.1| - 0.27 11.3 3.4 1.2 9.2 0.2 2.4 1 1 1 2 2 2 0 Rubredoxin zf-RRN7 PF11781.8 gi|73670997|ref|YP_307012.1| - 0.3 10.8 1.8 4.7 7.0 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Zn-C2H2_12 PF18112.1 gi|73670997|ref|YP_307012.1| - 1.1 9.7 4.3 21 5.7 0.1 2.8 3 0 0 3 3 3 0 Autophagy receptor zinc finger-C2H2 domain Gp_dh_C PF02800.20 gi|73670998|ref|YP_307013.1| - 4.7e-25 88.0 0.1 7e-25 87.5 0.1 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|73670998|ref|YP_307013.1| - 1.1e-10 41.6 0.0 2.6e-10 40.5 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|73670998|ref|YP_307013.1| - 2.4e-07 31.0 0.8 1.6e-06 28.3 0.0 2.5 2 1 0 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|73670998|ref|YP_307013.1| - 0.00013 22.2 0.0 0.00042 20.6 0.0 1.9 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|73670998|ref|YP_307013.1| - 0.00034 20.0 0.1 0.016 14.6 0.1 2.3 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|73670998|ref|YP_307013.1| - 0.0011 19.6 0.0 0.0027 18.4 0.0 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|73670998|ref|YP_307013.1| - 0.0013 19.6 0.0 0.003 18.4 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold TrkA_N PF02254.18 gi|73670998|ref|YP_307013.1| - 0.002 18.3 0.1 0.0045 17.2 0.1 1.6 1 0 0 1 1 1 1 TrkA-N domain IlvN PF07991.12 gi|73670998|ref|YP_307013.1| - 0.045 13.3 0.4 0.61 9.6 0.3 2.6 2 1 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Semialdhyde_dh PF01118.24 gi|73670998|ref|YP_307013.1| - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Usp PF00582.26 gi|73670999|ref|YP_307014.1| - 1.6e-35 122.6 0.8 2e-35 122.3 0.8 1.0 1 0 0 1 1 1 1 Universal stress protein family GARS_N PF02844.15 gi|73670999|ref|YP_307014.1| - 0.016 16.0 0.1 0.024 15.4 0.1 1.7 1 1 0 1 1 1 0 Phosphoribosylglycinamide synthetase, N domain DeoRC PF00455.22 gi|73670999|ref|YP_307014.1| - 0.017 15.1 0.1 0.028 14.4 0.1 1.4 1 0 0 1 1 1 0 DeoR C terminal sensor domain SBP_bac_5 PF00496.22 gi|73671000|ref|YP_307015.1| - 1.8e-84 283.9 0.5 2.4e-84 283.5 0.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Methyltransf_25 PF13649.6 gi|73671001|ref|YP_307016.1| - 6.3e-14 52.4 0.0 1.2e-13 51.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73671001|ref|YP_307016.1| - 1.9e-11 44.4 0.0 3.4e-11 43.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73671001|ref|YP_307016.1| - 7.6e-08 32.4 0.0 1.2e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73671001|ref|YP_307016.1| - 1.6e-07 31.9 0.0 3.7e-07 30.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 gi|73671001|ref|YP_307016.1| - 5.8e-07 29.3 0.0 8.1e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_31 PF13847.6 gi|73671001|ref|YP_307016.1| - 2.8e-06 27.2 0.0 5.8e-06 26.2 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain TehB PF03848.14 gi|73671001|ref|YP_307016.1| - 4.5e-06 26.2 0.0 7.4e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 Tellurite resistance protein TehB RrnaAD PF00398.20 gi|73671001|ref|YP_307016.1| - 5.6e-05 22.3 0.0 7.2e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.14 gi|73671001|ref|YP_307016.1| - 5.7e-05 22.7 0.0 9.7e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|73671001|ref|YP_307016.1| - 0.0005 19.5 0.0 0.00078 18.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|73671001|ref|YP_307016.1| - 0.0008 19.4 0.0 0.0013 18.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73671001|ref|YP_307016.1| - 0.001 18.5 0.0 0.0017 17.7 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family CMAS PF02353.20 gi|73671001|ref|YP_307016.1| - 0.0026 17.1 0.0 0.0035 16.7 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase FtsJ PF01728.19 gi|73671001|ref|YP_307016.1| - 0.0028 17.8 0.0 0.0046 17.1 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase DREV PF05219.12 gi|73671001|ref|YP_307016.1| - 0.0087 15.2 0.0 0.014 14.5 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Methyltr_RsmB-F PF01189.17 gi|73671001|ref|YP_307016.1| - 0.092 12.4 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F BPD_transp_1 PF00528.22 gi|73671002|ref|YP_307017.1| - 1.2e-39 136.0 10.7 1.2e-39 136.0 10.7 2.0 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|73671003|ref|YP_307018.1| - 4.1e-26 91.9 11.6 5.6e-26 91.4 11.6 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Methyltransf_2 PF00891.18 gi|73671004|ref|YP_307019.1| - 1.4e-13 50.6 0.0 2.4e-13 49.9 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain Dimerisation2 PF16864.5 gi|73671004|ref|YP_307019.1| - 2.3e-09 37.1 0.9 8.3e-08 32.1 0.9 2.4 1 1 0 1 1 1 1 Dimerisation domain PCMT PF01135.19 gi|73671004|ref|YP_307019.1| - 0.00064 19.5 0.0 0.0022 17.8 0.0 1.8 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|73671004|ref|YP_307019.1| - 0.0013 19.4 0.0 0.0026 18.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73671004|ref|YP_307019.1| - 0.0015 18.1 0.0 0.0025 17.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|73671004|ref|YP_307019.1| - 0.0032 18.2 0.0 0.0072 17.1 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain HTH_IclR PF09339.10 gi|73671004|ref|YP_307019.1| - 0.032 14.0 0.0 0.092 12.6 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain PrmA PF06325.13 gi|73671004|ref|YP_307019.1| - 0.098 12.0 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_16 PF10294.9 gi|73671004|ref|YP_307019.1| - 0.18 11.5 0.0 0.38 10.5 0.0 1.5 1 0 0 1 1 1 0 Lysine methyltransferase ABC_tran PF00005.27 gi|73671005|ref|YP_307020.1| - 1.8e-54 183.9 0.0 1.8e-27 96.5 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 gi|73671005|ref|YP_307020.1| - 6.7e-19 68.2 0.0 3.3e-16 59.6 0.0 2.6 3 0 0 3 3 2 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|73671005|ref|YP_307020.1| - 1.1e-16 61.0 0.3 1.8e-08 34.1 0.0 2.8 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|73671005|ref|YP_307020.1| - 9.1e-13 48.7 0.5 5.3e-05 23.5 0.2 3.7 2 2 0 2 2 2 2 AAA domain AAA_21 PF13304.6 gi|73671005|ref|YP_307020.1| - 3.4e-12 46.8 4.9 0.00025 21.0 0.0 4.1 4 0 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|73671005|ref|YP_307020.1| - 7.4e-08 32.0 0.2 0.0043 16.8 0.0 2.8 3 0 0 3 3 2 2 P-loop containing region of AAA domain AAA PF00004.29 gi|73671005|ref|YP_307020.1| - 4.2e-06 27.2 0.8 0.015 15.7 0.0 3.8 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|73671005|ref|YP_307020.1| - 4.2e-06 26.8 0.9 0.07 13.0 0.0 3.3 4 0 0 4 4 3 2 NACHT domain AAA_25 PF13481.6 gi|73671005|ref|YP_307020.1| - 9.4e-06 25.3 0.5 0.05 13.2 0.1 3.5 3 1 0 3 3 3 1 AAA domain RsgA_GTPase PF03193.16 gi|73671005|ref|YP_307020.1| - 1.2e-05 25.2 0.2 0.021 14.7 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_23 PF13476.6 gi|73671005|ref|YP_307020.1| - 1.5e-05 25.6 0.1 0.13 12.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|73671005|ref|YP_307020.1| - 3e-05 24.5 2.8 0.028 14.8 0.1 2.6 3 1 0 3 3 2 2 AAA ATPase domain TniB PF05621.11 gi|73671005|ref|YP_307020.1| - 4e-05 23.1 0.5 1.9 7.8 0.0 4.0 4 0 0 4 4 4 1 Bacterial TniB protein DUF87 PF01935.17 gi|73671005|ref|YP_307020.1| - 5.5e-05 23.4 1.1 0.0038 17.3 0.0 2.4 2 0 0 2 2 2 1 Helicase HerA, central domain NB-ARC PF00931.22 gi|73671005|ref|YP_307020.1| - 8.9e-05 21.8 0.6 0.22 10.7 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain TrwB_AAD_bind PF10412.9 gi|73671005|ref|YP_307020.1| - 0.00016 20.7 0.1 0.033 13.1 0.0 2.4 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain ATPase PF06745.13 gi|73671005|ref|YP_307020.1| - 0.00017 21.0 3.5 3.1 7.1 0.0 3.2 3 0 0 3 3 3 0 KaiC IstB_IS21 PF01695.17 gi|73671005|ref|YP_307020.1| - 0.00024 20.9 2.5 0.47 10.2 0.0 3.8 4 0 0 4 4 4 1 IstB-like ATP binding protein PRK PF00485.18 gi|73671005|ref|YP_307020.1| - 0.00031 20.6 0.3 0.23 11.2 0.0 2.3 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family CLP1_P PF16575.5 gi|73671005|ref|YP_307020.1| - 0.00035 20.4 0.3 0.00069 19.5 0.0 1.6 2 0 0 2 2 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop Zeta_toxin PF06414.12 gi|73671005|ref|YP_307020.1| - 0.00049 19.4 0.0 0.027 13.8 0.0 2.2 2 0 0 2 2 2 1 Zeta toxin AAA_5 PF07728.14 gi|73671005|ref|YP_307020.1| - 0.0005 20.1 0.7 0.63 10.0 0.1 3.3 4 0 0 4 4 2 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|73671005|ref|YP_307020.1| - 0.00052 20.6 0.0 0.97 10.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|73671005|ref|YP_307020.1| - 0.00053 20.2 0.0 1.4 9.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|73671005|ref|YP_307020.1| - 0.00072 19.0 0.0 1.2 8.5 0.0 3.0 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI DEAD PF00270.29 gi|73671005|ref|YP_307020.1| - 0.00089 19.1 0.4 0.64 9.8 0.0 3.4 3 1 0 3 3 3 1 DEAD/DEAH box helicase PhoH PF02562.16 gi|73671005|ref|YP_307020.1| - 0.0012 18.4 0.1 1.5 8.2 0.0 2.5 2 0 0 2 2 2 2 PhoH-like protein APS_kinase PF01583.20 gi|73671005|ref|YP_307020.1| - 0.0012 18.7 0.1 0.36 10.7 0.1 2.5 2 0 0 2 2 2 1 Adenylylsulphate kinase T2SSE PF00437.20 gi|73671005|ref|YP_307020.1| - 0.0013 17.9 0.1 0.095 11.7 0.0 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_30 PF13604.6 gi|73671005|ref|YP_307020.1| - 0.0013 18.5 1.5 0.17 11.6 0.0 2.9 4 0 0 4 4 3 1 AAA domain AAA_24 PF13479.6 gi|73671005|ref|YP_307020.1| - 0.002 17.9 0.5 1.4 8.6 0.2 2.3 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|73671005|ref|YP_307020.1| - 0.0026 18.1 0.0 0.39 11.1 0.0 2.7 2 0 0 2 2 2 1 RNA helicase NTPase_1 PF03266.15 gi|73671005|ref|YP_307020.1| - 0.0029 17.5 0.9 1.6 8.7 0.1 2.7 3 0 0 3 3 2 1 NTPase Sigma54_activat PF00158.26 gi|73671005|ref|YP_307020.1| - 0.0031 17.2 0.5 0.46 10.2 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_7 PF12775.7 gi|73671005|ref|YP_307020.1| - 0.0038 16.8 0.0 3 7.3 0.0 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region MobB PF03205.14 gi|73671005|ref|YP_307020.1| - 0.0047 16.8 0.8 1.5 8.7 0.1 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B CbiA PF01656.23 gi|73671005|ref|YP_307020.1| - 0.0052 16.8 1.7 0.71 9.9 0.2 2.6 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain Rad17 PF03215.15 gi|73671005|ref|YP_307020.1| - 0.01 15.7 0.1 1.9 8.4 0.0 2.9 3 1 0 3 3 3 0 Rad17 P-loop domain ResIII PF04851.15 gi|73671005|ref|YP_307020.1| - 0.014 15.4 0.0 6.8 6.6 0.0 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit TIP49 PF06068.13 gi|73671005|ref|YP_307020.1| - 0.016 14.5 0.1 0.79 8.9 0.0 2.2 2 0 0 2 2 2 0 TIP49 P-loop domain TsaE PF02367.17 gi|73671005|ref|YP_307020.1| - 0.024 14.7 0.2 3.2 7.8 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE FtsK_SpoIIIE PF01580.18 gi|73671005|ref|YP_307020.1| - 0.026 13.9 0.1 0.77 9.1 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family SRP54 PF00448.22 gi|73671005|ref|YP_307020.1| - 0.028 14.0 1.3 0.36 10.4 0.1 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Pox_A32 PF04665.12 gi|73671005|ref|YP_307020.1| - 0.03 13.8 0.0 3.9 6.9 0.0 2.3 2 0 0 2 2 2 0 Poxvirus A32 protein ATP-synt_ab PF00006.25 gi|73671005|ref|YP_307020.1| - 0.032 13.9 0.1 4.8 6.8 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_15 PF13175.6 gi|73671005|ref|YP_307020.1| - 0.035 13.8 0.2 3.7 7.2 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain ATPase_2 PF01637.18 gi|73671005|ref|YP_307020.1| - 0.045 13.7 0.1 6.4 6.6 0.0 2.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea MMR_HSR1 PF01926.23 gi|73671005|ref|YP_307020.1| - 0.048 13.7 1.7 0.54 10.4 0.1 2.4 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_19 PF13245.6 gi|73671005|ref|YP_307020.1| - 0.055 13.8 0.2 12 6.3 0.1 2.8 3 0 0 3 3 2 0 AAA domain AAA_14 PF13173.6 gi|73671005|ref|YP_307020.1| - 0.057 13.4 0.0 15 5.6 0.0 3.5 4 0 0 4 4 4 0 AAA domain ATP_bind_1 PF03029.17 gi|73671005|ref|YP_307020.1| - 0.082 12.7 0.5 4.2 7.1 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein PIF1 PF05970.14 gi|73671005|ref|YP_307020.1| - 0.1 11.7 0.2 0.44 9.7 0.0 2.0 2 0 0 2 2 2 0 PIF1-like helicase Roc PF08477.13 gi|73671005|ref|YP_307020.1| - 0.13 12.5 0.2 17 5.7 0.1 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ABC_ATPase PF09818.9 gi|73671005|ref|YP_307020.1| - 0.13 11.0 4.6 13 4.5 0.0 4.0 4 1 0 4 4 4 0 Predicted ATPase of the ABC class RecA PF00154.21 gi|73671005|ref|YP_307020.1| - 0.14 11.6 0.7 4.4 6.7 0.1 2.5 2 0 0 2 2 2 0 recA bacterial DNA recombination protein Cytidylate_kin PF02224.18 gi|73671005|ref|YP_307020.1| - 0.18 11.5 0.0 6.1 6.5 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase cobW PF02492.19 gi|73671005|ref|YP_307020.1| - 0.31 10.6 1.1 13 5.3 0.0 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SbcCD_C PF13558.6 gi|73671005|ref|YP_307020.1| - 0.42 10.9 1.6 48 4.3 0.2 3.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit DUF2075 PF09848.9 gi|73671005|ref|YP_307020.1| - 0.64 9.2 1.9 12 5.0 0.4 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) dNK PF01712.19 gi|73671005|ref|YP_307020.1| - 1.4 8.8 2.6 0.99 9.2 0.1 1.9 2 0 0 2 2 2 0 Deoxynucleoside kinase ABC_tran PF00005.27 gi|73671006|ref|YP_307021.1| - 7.3e-33 114.0 0.0 1.4e-32 113.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|73671006|ref|YP_307021.1| - 7.5e-11 42.4 0.4 6.3e-06 26.2 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|73671006|ref|YP_307021.1| - 2.9e-07 31.1 0.0 6.6e-07 30.0 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|73671006|ref|YP_307021.1| - 1.5e-05 25.6 0.0 2.1e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|73671006|ref|YP_307021.1| - 7e-05 22.5 0.1 0.00013 21.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|73671006|ref|YP_307021.1| - 0.00015 21.6 0.0 0.7 9.5 0.1 2.1 1 1 0 2 2 2 2 AAA ATPase domain AAA_27 PF13514.6 gi|73671006|ref|YP_307021.1| - 0.0024 17.5 1.3 0.0027 17.3 0.0 1.6 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|73671006|ref|YP_307021.1| - 0.0069 15.8 0.0 2.9 7.3 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 gi|73671006|ref|YP_307021.1| - 0.041 13.6 0.4 0.29 10.8 0.1 2.1 2 1 1 3 3 3 0 AAA domain MobB PF03205.14 gi|73671006|ref|YP_307021.1| - 0.064 13.2 0.4 11 5.9 0.1 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B RsgA_GTPase PF03193.16 gi|73671006|ref|YP_307021.1| - 0.095 12.6 0.1 0.18 11.7 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 gi|73671006|ref|YP_307021.1| - 0.1 13.0 0.0 0.74 10.2 0.0 2.6 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC2_membrane PF01061.24 gi|73671007|ref|YP_307022.1| - 2e-37 128.7 25.1 2e-37 128.7 25.1 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|73671007|ref|YP_307022.1| - 8.2e-12 44.9 33.2 8.2e-12 44.9 33.2 1.2 1 1 0 1 1 1 1 ABC-2 family transporter protein PKD PF00801.20 gi|73671008|ref|YP_307023.1| - 8.4e-76 249.8 33.6 1.8e-15 56.6 0.6 6.3 6 0 0 6 6 6 6 PKD domain MG2 PF01835.19 gi|73671008|ref|YP_307023.1| - 2.2e-06 28.0 14.6 4 8.0 0.2 5.9 1 1 4 5 5 5 4 MG2 domain DUF5513 PF17632.2 gi|73671008|ref|YP_307023.1| - 2.4e-06 27.9 4.4 5.1 7.6 0.1 5.7 6 0 0 6 6 6 1 Family of unknown function (DUF5513) DUF3324 PF11797.8 gi|73671008|ref|YP_307023.1| - 0.00052 20.0 16.4 3.2 7.7 0.3 5.4 5 0 0 5 5 5 2 Protein of unknown function C-terminal (DUF3324) Phage_Cox PF10743.9 gi|73671008|ref|YP_307023.1| - 0.00081 19.4 5.1 4.3 7.5 0.2 3.9 4 0 0 4 4 4 1 Regulatory phage protein cox Big_4 PF07532.11 gi|73671008|ref|YP_307023.1| - 0.00089 19.0 13.5 12 5.7 0.1 6.4 6 0 0 6 6 6 0 Bacterial Ig-like domain (group 4) PKD_3 PF16820.5 gi|73671008|ref|YP_307023.1| - 0.0013 18.4 7.6 9 6.1 0.1 5.2 5 0 0 5 5 5 1 PKD-like domain ribosomal_L24 PF17136.4 gi|73671008|ref|YP_307023.1| - 0.003 17.9 0.0 62 4.1 0.0 4.6 4 0 0 4 4 4 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 DUF2381 PF09544.10 gi|73671008|ref|YP_307023.1| - 0.0074 15.9 2.2 38 3.7 0.0 4.8 5 1 0 6 6 6 0 Protein of unknown function (DUF2381) PBP3 PF18056.1 gi|73671008|ref|YP_307023.1| - 0.015 15.4 5.7 7.6 6.7 0.1 3.5 3 0 0 3 3 3 0 Penicillin Binding Protein 3 Domain TBSV_P22 PF03558.13 gi|73671008|ref|YP_307023.1| - 0.073 12.5 0.0 0.16 11.4 0.0 1.6 1 0 0 1 1 1 0 TBSV core protein P21/P22 POTRA_3 PF17287.2 gi|73671008|ref|YP_307023.1| - 0.49 9.9 4.5 35 4.0 0.0 4.6 5 1 1 6 6 6 0 POTRA domain DUF3888 PF13027.6 gi|73671008|ref|YP_307023.1| - 0.51 10.8 9.7 26 5.3 0.0 4.9 5 0 0 5 5 5 0 Protein of unknown function (DUF3888) DUF4625 PF15418.6 gi|73671008|ref|YP_307023.1| - 1.2 9.3 5.5 1e+02 3.1 0.0 4.8 5 0 0 5 5 5 0 Domain of unknown function (DUF4625) DUF5011 PF16403.5 gi|73671008|ref|YP_307023.1| - 3.3 7.9 36.0 6.8 6.9 0.6 5.9 6 0 0 6 6 6 0 Domain of unknown function (DUF5011) zf-CDGSH PF09360.10 gi|73671009|ref|YP_307024.1| - 5.8e-41 138.5 2.7 7.1e-20 71.0 0.2 2.7 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 gi|73671009|ref|YP_307024.1| - 1.9e-10 40.7 0.5 4e-10 39.6 0.1 1.8 2 0 0 2 2 2 1 Divergent 4Fe-4S mono-cluster Putative_PNPOx PF01243.20 gi|73671010|ref|YP_307025.1| - 7.2e-15 54.9 0.0 8.8e-15 54.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|73671010|ref|YP_307025.1| - 0.0034 17.0 0.0 0.0043 16.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like TrmB PF01978.19 gi|73671011|ref|YP_307026.1| - 2.7e-21 75.2 1.9 5.7e-21 74.2 0.8 2.0 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB aGPT-Pplase2 PF18724.1 gi|73671011|ref|YP_307026.1| - 0.011 15.5 0.0 0.022 14.6 0.0 1.3 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 2 LPD37 PF18853.1 gi|73671011|ref|YP_307026.1| - 0.017 14.6 0.0 0.025 14.1 0.0 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 37 HTH_27 PF13463.6 gi|73671011|ref|YP_307026.1| - 0.12 12.9 0.0 0.23 12.0 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain Methyltransf_25 PF13649.6 gi|73671012|ref|YP_307027.1| - 2.2e-10 41.1 0.0 4.3e-10 40.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|73671012|ref|YP_307027.1| - 5.5e-10 39.0 0.2 8.1e-09 35.2 0.0 2.0 1 1 1 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 gi|73671012|ref|YP_307027.1| - 2e-08 34.8 0.0 3.6e-08 33.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73671012|ref|YP_307027.1| - 2.5e-05 24.1 0.1 0.00043 20.1 0.1 2.3 1 1 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|73671012|ref|YP_307027.1| - 4.4e-05 23.0 0.0 6.3e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_23 PF13489.6 gi|73671012|ref|YP_307027.1| - 6.5e-05 22.8 0.0 9e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73671012|ref|YP_307027.1| - 0.0023 17.5 0.0 0.0033 17.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|73671012|ref|YP_307027.1| - 0.0096 15.7 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|73671012|ref|YP_307027.1| - 0.016 15.9 0.0 0.031 15.0 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|73671012|ref|YP_307027.1| - 0.034 13.5 0.0 0.054 12.9 0.0 1.4 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 gi|73671012|ref|YP_307027.1| - 0.089 12.8 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain SNO PF01174.19 gi|73671013|ref|YP_307028.1| - 2.6e-53 180.7 0.0 2.9e-53 180.5 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|73671013|ref|YP_307028.1| - 3.7e-12 46.3 0.0 4.9e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.17 gi|73671013|ref|YP_307028.1| - 7.2e-09 35.6 0.0 9.4e-09 35.2 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 GATase PF00117.28 gi|73671013|ref|YP_307028.1| - 1.1e-08 35.1 0.2 1.3e-07 31.6 0.2 2.0 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|73671013|ref|YP_307028.1| - 0.0065 16.3 0.4 0.016 15.0 0.3 1.6 1 1 1 2 2 2 1 DJ-1/PfpI family BPL_N PF09825.9 gi|73671013|ref|YP_307028.1| - 0.0066 15.6 0.0 0.015 14.4 0.0 1.6 2 0 0 2 2 2 1 Biotin-protein ligase, N terminal Peptidase_C26 PF07722.13 gi|73671013|ref|YP_307028.1| - 0.091 12.5 0.1 0.49 10.1 0.1 2.4 2 1 0 2 2 2 0 Peptidase C26 SOR_SNZ PF01680.17 gi|73671014|ref|YP_307029.1| - 4.2e-104 346.8 8.8 6.1e-104 346.3 8.8 1.2 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|73671014|ref|YP_307029.1| - 2.2e-12 46.9 8.6 6.7e-08 32.1 2.4 2.7 2 1 0 2 2 2 2 Thiazole biosynthesis protein ThiG DUF561 PF04481.12 gi|73671014|ref|YP_307029.1| - 0.00029 20.1 0.6 0.015 14.5 0.0 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF561) ABC_sub_bind PF04392.12 gi|73671014|ref|YP_307029.1| - 0.00078 18.8 0.6 0.00078 18.8 0.6 1.6 2 0 0 2 2 2 1 ABC transporter substrate binding protein Dus PF01207.17 gi|73671014|ref|YP_307029.1| - 0.00092 18.4 1.2 0.24 10.4 0.1 2.4 2 1 0 2 2 2 2 Dihydrouridine synthase (Dus) NanE PF04131.14 gi|73671014|ref|YP_307029.1| - 0.002 17.4 3.9 0.013 14.7 0.2 2.8 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.21 gi|73671014|ref|YP_307029.1| - 0.0031 16.7 0.1 0.081 12.1 0.0 2.3 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase TetR_C_27 PF17935.1 gi|73671014|ref|YP_307029.1| - 0.0037 17.3 0.0 0.014 15.4 0.0 1.9 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain NMO PF03060.15 gi|73671014|ref|YP_307029.1| - 0.0067 15.9 0.5 0.0067 15.9 0.5 2.2 2 0 0 2 2 2 1 Nitronate monooxygenase OMPdecase PF00215.24 gi|73671014|ref|YP_307029.1| - 0.011 15.4 0.5 0.6 9.7 0.0 2.4 1 1 1 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family IMPDH PF00478.25 gi|73671014|ref|YP_307029.1| - 0.011 14.8 0.4 0.016 14.3 0.3 1.4 1 1 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain DUF4777 PF16007.5 gi|73671014|ref|YP_307029.1| - 0.16 12.3 0.0 0.44 10.8 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) Cucumopine_C PF18631.1 gi|73671014|ref|YP_307029.1| - 0.18 11.8 0.0 0.35 10.8 0.0 1.5 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain PAP2 PF01569.21 gi|73671015|ref|YP_307030.1| - 1.4e-21 76.6 6.2 1.6e-21 76.5 0.8 3.2 1 1 2 3 3 3 1 PAP2 superfamily PAP2_3 PF14378.6 gi|73671015|ref|YP_307030.1| - 2.1e-11 43.9 1.8 2.7e-11 43.5 0.3 1.9 2 0 0 2 2 2 1 PAP2 superfamily RACo_C_ter PF14574.6 gi|73671016|ref|YP_307031.1| - 5.3e-66 222.3 0.5 7.5e-65 218.5 0.5 2.3 1 1 0 1 1 1 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|73671016|ref|YP_307031.1| - 5.7e-09 35.9 0.1 1e-08 35.0 0.1 1.5 1 0 0 1 1 1 1 RACo middle region Fer4_6 PF12837.7 gi|73671016|ref|YP_307031.1| - 0.00034 20.6 10.0 0.028 14.5 0.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|73671016|ref|YP_307031.1| - 0.00055 20.1 14.4 0.0011 19.1 14.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73671016|ref|YP_307031.1| - 0.011 15.8 11.6 0.43 10.8 2.1 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|73671016|ref|YP_307031.1| - 0.02 14.7 2.2 0.02 14.7 2.2 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|73671016|ref|YP_307031.1| - 0.053 14.5 13.8 1.1 10.3 5.2 2.7 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|73671016|ref|YP_307031.1| - 0.09 13.4 15.9 0.37 11.4 15.7 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|73671016|ref|YP_307031.1| - 0.29 11.3 16.6 1.1 9.5 16.8 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|73671016|ref|YP_307031.1| - 3.2 8.0 13.5 0.68 10.1 2.9 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|73671016|ref|YP_307031.1| - 6.2 8.0 14.5 14 6.9 3.6 2.9 2 0 0 2 2 2 0 4Fe-4S binding domain B12-binding PF02310.19 gi|73671017|ref|YP_307032.1| - 3.4e-17 62.6 0.5 6.6e-17 61.7 0.5 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|73671017|ref|YP_307032.1| - 1.5e-10 41.3 0.0 4.3e-10 39.9 0.0 1.8 1 0 0 1 1 1 1 B12 binding domain URO-D PF01208.17 gi|73671018|ref|YP_307033.1| - 5.9e-67 226.3 0.0 6.7e-67 226.1 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) YdjM PF04307.14 gi|73671019|ref|YP_307034.1| - 1.7e-18 66.6 6.6 2.2e-18 66.2 6.6 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase WBS28 PF15164.6 gi|73671019|ref|YP_307034.1| - 0.18 11.1 2.8 0.21 10.8 0.3 1.9 2 0 0 2 2 2 0 Williams-Beuren syndrome chromosomal region 28 protein homologue YdjM PF04307.14 gi|73671020|ref|YP_307035.1| - 3.4e-20 72.0 2.1 5.1e-20 71.5 2.1 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase CD225 PF04505.12 gi|73671020|ref|YP_307035.1| - 0.14 12.3 0.3 0.71 10.0 0.1 2.3 2 0 0 2 2 2 0 Interferon-induced transmembrane protein Sigma_reg_N PF13800.6 gi|73671020|ref|YP_307035.1| - 3.1 8.1 5.4 1.3 9.3 0.2 2.8 3 0 0 3 3 3 0 Sigma factor regulator N-terminal Sod_Fe_C PF02777.18 gi|73671022|ref|YP_307037.1| - 6e-34 116.3 1.3 7.2e-34 116.0 0.3 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|73671022|ref|YP_307037.1| - 1e-25 90.0 1.7 1.9e-25 89.2 1.7 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain YdjM PF04307.14 gi|73671023|ref|YP_307038.1| - 2.2e-18 66.2 7.7 3.1e-18 65.7 7.7 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Baculo_11_kDa PF06143.11 gi|73671023|ref|YP_307038.1| - 0.24 11.0 0.6 1.6 8.4 0.0 2.3 2 0 0 2 2 2 0 Baculovirus 11 kDa family RDD PF06271.12 gi|73671024|ref|YP_307039.1| - 2.3e-19 70.0 8.4 3.8e-19 69.3 8.4 1.3 1 1 0 1 1 1 1 RDD family ApoLp-III PF07464.11 gi|73671025|ref|YP_307040.1| - 0.00026 21.1 3.6 0.00035 20.7 3.6 1.2 1 0 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) TssO PF17561.2 gi|73671025|ref|YP_307040.1| - 0.00095 19.3 2.0 0.2 11.7 0.2 2.0 1 1 1 2 2 2 2 Type VI secretion system, TssO DUF883 PF05957.13 gi|73671025|ref|YP_307040.1| - 0.0065 17.0 2.1 0.032 14.8 0.2 2.1 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF883) REF PF05755.12 gi|73671025|ref|YP_307040.1| - 0.014 15.2 0.4 0.083 12.7 0.3 1.8 1 1 0 1 1 1 0 Rubber elongation factor protein (REF) Syntaxin_2 PF14523.6 gi|73671025|ref|YP_307040.1| - 0.018 15.4 3.8 0.16 12.4 3.8 2.1 1 1 0 1 1 1 0 Syntaxin-like protein Baculo_PEP_C PF04513.12 gi|73671025|ref|YP_307040.1| - 0.026 14.5 0.3 0.35 10.9 0.5 1.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 gi|73671025|ref|YP_307040.1| - 0.029 14.4 4.1 0.081 13.0 2.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF948 PF06103.11 gi|73671025|ref|YP_307040.1| - 0.036 14.3 2.4 0.32 11.3 2.3 2.2 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) GCN5L1 PF06320.13 gi|73671025|ref|YP_307040.1| - 0.069 13.3 1.7 0.31 11.2 1.7 1.9 1 1 0 1 1 1 0 GCN5-like protein 1 (GCN5L1) Apolipoprotein PF01442.18 gi|73671025|ref|YP_307040.1| - 0.098 12.5 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain CdvA PF18822.1 gi|73671025|ref|YP_307040.1| - 0.11 12.4 5.1 2.2 8.1 0.4 2.4 1 1 1 2 2 2 0 CdvA-like coiled-coil domain DUF1451 PF07295.11 gi|73671025|ref|YP_307040.1| - 0.12 12.4 0.9 5 7.1 0.2 2.0 1 1 0 1 1 1 0 Zinc-ribbon containing domain HAUS5 PF14817.6 gi|73671025|ref|YP_307040.1| - 0.19 10.4 1.1 0.41 9.4 0.2 1.7 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 5 FlaC_arch PF05377.11 gi|73671025|ref|YP_307040.1| - 0.27 11.7 4.4 4.5 7.7 2.0 2.9 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) V-SNARE PF05008.15 gi|73671025|ref|YP_307040.1| - 0.35 11.3 3.0 7 7.1 0.1 2.7 1 1 2 3 3 3 0 Vesicle transport v-SNARE protein N-terminus DUF4208 PF13907.6 gi|73671025|ref|YP_307040.1| - 0.58 10.6 4.8 0.85 10.1 0.4 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4208) YtxH PF12732.7 gi|73671025|ref|YP_307040.1| - 0.83 10.2 9.6 0.44 11.1 3.7 2.2 1 1 1 2 2 2 0 YtxH-like protein Rpn9_C PF18261.1 gi|73671025|ref|YP_307040.1| - 3.2 7.4 7.0 7.5 6.2 0.1 3.8 4 0 0 4 4 4 0 Rpn9 C-terminal helix DUF373 PF04123.13 gi|73671026|ref|YP_307041.1| - 1.8e-120 402.4 10.6 2e-120 402.3 10.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) ETRAMP PF09716.10 gi|73671026|ref|YP_307041.1| - 0.003 17.6 0.6 3.2 7.9 0.0 3.5 3 0 0 3 3 3 2 Malarial early transcribed membrane protein (ETRAMP) PNP_UDP_1 PF01048.20 gi|73671027|ref|YP_307042.1| - 2.8e-44 151.1 0.2 3.1e-44 151.0 0.2 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DEAD PF00270.29 gi|73671028|ref|YP_307043.1| - 1.3e-24 86.9 0.0 2.6e-24 86.0 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|73671028|ref|YP_307043.1| - 6.9e-18 65.0 0.0 2.2e-17 63.4 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|73671028|ref|YP_307043.1| - 1.5e-11 44.6 0.0 3e-11 43.6 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF3467 PF11950.8 gi|73671029|ref|YP_307044.1| - 1.3e-18 66.9 0.0 1.7e-18 66.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3467) DUF2205 PF10224.9 gi|73671029|ref|YP_307044.1| - 0.091 12.8 0.0 0.3 11.1 0.0 1.9 2 0 0 2 2 2 0 Short coiled-coil protein LSM PF01423.22 gi|73671030|ref|YP_307045.1| - 1.8e-20 72.4 2.1 2e-20 72.3 2.1 1.0 1 0 0 1 1 1 1 LSM domain PhoH PF02562.16 gi|73671030|ref|YP_307045.1| - 0.0091 15.5 0.1 0.0091 15.5 0.1 1.1 1 0 0 1 1 1 1 PhoH-like protein B-block_TFIIIC PF04182.12 gi|73671031|ref|YP_307046.1| - 6.8e-05 22.9 0.1 0.0001 22.3 0.1 1.3 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR_2 PF12802.7 gi|73671031|ref|YP_307046.1| - 0.0062 16.4 0.0 0.01 15.7 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|73671031|ref|YP_307046.1| - 0.0089 15.6 0.1 0.021 14.4 0.1 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|73671031|ref|YP_307046.1| - 0.019 14.9 0.0 0.028 14.3 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_micro PF17007.5 gi|73671031|ref|YP_307046.1| - 0.041 12.7 0.5 0.052 12.4 0.5 1.1 1 0 0 1 1 1 0 HTH-like TrmB PF01978.19 gi|73671031|ref|YP_307046.1| - 0.041 13.8 0.1 0.068 13.1 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB SDH_sah PF01972.16 gi|73671033|ref|YP_307048.1| - 1.9e-81 273.2 0.2 2.3e-81 272.9 0.2 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase Peptidase_S49 PF01343.18 gi|73671033|ref|YP_307048.1| - 0.0018 18.2 0.0 0.02 14.9 0.0 2.1 2 0 0 2 2 2 1 Peptidase family S49 CLP_protease PF00574.23 gi|73671033|ref|YP_307048.1| - 0.0033 17.3 0.0 0.0078 16.1 0.0 1.6 2 0 0 2 2 2 1 Clp protease Multi_Drug_Res PF00893.19 gi|73671034|ref|YP_307049.1| - 2.6e-32 111.3 5.5 3.1e-32 111.1 5.5 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 gi|73671034|ref|YP_307049.1| - 0.00025 21.2 13.1 0.00057 20.1 13.2 1.5 1 1 0 1 1 1 1 EamA-like transporter family Radical_SAM PF04055.21 gi|73671035|ref|YP_307050.1| - 1.5e-07 31.9 0.6 4.8e-07 30.3 0.1 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|73671035|ref|YP_307050.1| - 0.0025 18.1 0.0 0.0048 17.2 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Methyltransf_25 PF13649.6 gi|73671036|ref|YP_307051.1| - 1.2e-14 54.7 0.0 6.1e-14 52.5 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73671036|ref|YP_307051.1| - 4.7e-14 52.8 0.0 3.1e-13 50.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73671036|ref|YP_307051.1| - 1.3e-13 51.5 0.0 1.6e-12 48.0 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73671036|ref|YP_307051.1| - 1.6e-11 44.3 0.0 1.9e-11 44.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|73671036|ref|YP_307051.1| - 4.5e-11 42.6 0.1 1.1e-10 41.3 0.0 1.6 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|73671036|ref|YP_307051.1| - 5.6e-09 36.0 0.0 8.2e-09 35.5 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73671036|ref|YP_307051.1| - 1e-06 28.3 0.0 1.5e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|73671036|ref|YP_307051.1| - 0.00069 19.4 0.0 0.0016 18.3 0.0 1.5 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 gi|73671036|ref|YP_307051.1| - 0.002 17.6 0.0 0.0048 16.4 0.0 1.6 1 0 0 1 1 1 1 Putative methyltransferase TehB PF03848.14 gi|73671036|ref|YP_307051.1| - 0.0082 15.6 0.0 0.012 15.1 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB NodS PF05401.11 gi|73671036|ref|YP_307051.1| - 0.011 15.4 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) PrmA PF06325.13 gi|73671036|ref|YP_307051.1| - 0.043 13.2 0.0 0.068 12.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) B12-binding PF02310.19 gi|73671037|ref|YP_307052.1| - 1.8e-26 92.5 0.2 2.7e-26 92.0 0.2 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|73671037|ref|YP_307052.1| - 1.4e-17 63.8 0.2 3.2e-17 62.7 0.2 1.6 1 0 0 1 1 1 1 B12 binding domain AA_permease_2 PF13520.6 gi|73671038|ref|YP_307053.1| - 1.8e-65 221.4 43.2 2.3e-65 221.1 43.2 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|73671038|ref|YP_307053.1| - 4.6e-10 38.7 36.3 2.3e-09 36.4 36.3 1.9 1 1 0 1 1 1 1 Amino acid permease AAA_14 PF13173.6 gi|73671039|ref|YP_307054.1| - 5.1e-24 84.8 0.1 9.4e-24 83.9 0.1 1.5 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|73671039|ref|YP_307054.1| - 4.6e-12 46.2 0.1 9.3e-12 45.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|73671039|ref|YP_307054.1| - 0.0045 16.9 2.1 0.016 15.1 0.0 2.8 3 1 1 4 4 4 1 ATPase domain predominantly from Archaea AAA PF00004.29 gi|73671039|ref|YP_307054.1| - 0.0047 17.4 0.0 0.011 16.1 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|73671039|ref|YP_307054.1| - 0.018 14.8 0.1 0.048 13.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|73671039|ref|YP_307054.1| - 0.16 12.2 0.0 2.1 8.6 0.0 2.4 1 1 0 1 1 1 0 AAA domain WRKY PF03106.15 gi|73671040|ref|YP_307055.1| - 0.044 14.0 1.2 0.059 13.6 1.2 1.2 1 0 0 1 1 1 0 WRKY DNA -binding domain Death_2 PF14786.6 gi|73671041|ref|YP_307056.1| - 0.14 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Tube Death domain MAF_flag10 PF01973.18 gi|73671042|ref|YP_307057.1| - 1.9e-31 109.0 0.0 2.4e-31 108.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 tRNA-synt_1 PF00133.22 gi|73671043|ref|YP_307058.1| - 8.3e-194 645.2 1.7 1.1e-193 644.8 1.7 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|73671043|ref|YP_307058.1| - 3.1e-36 124.6 0.3 8.4e-36 123.2 0.3 1.8 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|73671043|ref|YP_307058.1| - 3.8e-24 85.2 0.7 2.2e-10 39.9 0.0 3.7 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|73671043|ref|YP_307058.1| - 1.6e-06 27.7 0.0 5.4e-06 26.0 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|73671043|ref|YP_307058.1| - 0.00048 19.7 1.7 0.002 17.7 0.0 2.7 4 0 0 4 4 4 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|73671043|ref|YP_307058.1| - 0.0032 16.4 0.0 0.019 13.9 0.0 2.1 2 0 0 2 2 2 1 tRNA synthetases class I (K) DUF5132 PF17195.4 gi|73671043|ref|YP_307058.1| - 0.13 12.4 1.7 0.5 10.5 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF5132) IBR PF01485.21 gi|73671043|ref|YP_307058.1| - 0.41 10.9 2.1 1.8 8.9 0.0 2.7 3 0 0 3 3 3 0 IBR domain, a half RING-finger domain EamA PF00892.20 gi|73671044|ref|YP_307059.1| - 6.5e-33 113.8 33.7 1e-17 64.6 10.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|73671044|ref|YP_307059.1| - 0.00061 19.2 1.5 0.00099 18.5 1.5 1.4 1 1 0 1 1 1 1 Triose-phosphate Transporter family Ribonuc_red_lgC PF02867.15 gi|73671045|ref|YP_307060.1| - 5.5e-141 470.7 0.0 1.4e-99 334.0 0.0 3.0 1 1 1 2 2 2 2 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|73671045|ref|YP_307060.1| - 5.2e-13 48.8 0.0 1.1e-12 47.8 0.0 1.6 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain Pro_isomerase PF00160.21 gi|73671046|ref|YP_307061.1| - 7e-53 179.1 0.8 7.8e-53 179.0 0.8 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Thioredoxin PF00085.20 gi|73671047|ref|YP_307062.1| - 6.4e-14 51.8 0.0 9.8e-14 51.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_9 PF14595.6 gi|73671047|ref|YP_307062.1| - 0.00027 20.7 0.0 0.00039 20.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|73671047|ref|YP_307062.1| - 0.0014 18.9 0.1 0.0074 16.6 0.0 2.4 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|73671047|ref|YP_307062.1| - 0.0018 18.7 0.1 0.0086 16.5 0.1 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Glutaredoxin PF00462.24 gi|73671047|ref|YP_307062.1| - 0.015 15.5 0.0 0.032 14.5 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin Thioredoxin_7 PF13899.6 gi|73671047|ref|YP_307062.1| - 0.017 15.3 0.0 0.036 14.2 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin-like Thioredoxin_3 PF13192.6 gi|73671047|ref|YP_307062.1| - 0.019 15.0 0.0 0.05 13.6 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin domain DIM1 PF02966.16 gi|73671047|ref|YP_307062.1| - 0.021 14.6 0.0 0.026 14.3 0.0 1.2 1 0 0 1 1 1 0 Mitosis protein DIM1 DUF929 PF06053.11 gi|73671047|ref|YP_307062.1| - 0.023 14.0 0.2 0.19 11.0 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF929) Thioredoxin_6 PF13848.6 gi|73671047|ref|YP_307062.1| - 0.068 13.1 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like domain LPAM_1 PF08139.12 gi|73671047|ref|YP_307062.1| - 0.62 10.7 3.1 1.4 9.6 3.1 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site PKD PF00801.20 gi|73671050|ref|YP_307065.1| - 7.4e-73 240.4 34.8 1.6e-14 53.5 0.4 5.4 5 0 0 5 5 5 5 PKD domain NHL PF01436.21 gi|73671050|ref|YP_307065.1| - 1.6e-45 150.9 13.7 2.5e-07 30.4 0.1 6.6 6 0 0 6 6 6 6 NHL repeat SGL PF08450.12 gi|73671050|ref|YP_307065.1| - 2.4e-14 53.5 6.4 0.0067 16.0 0.1 6.4 2 1 3 7 7 7 5 SMP-30/Gluconolactonase/LRE-like region DUF5128 PF17170.4 gi|73671050|ref|YP_307065.1| - 1.8e-13 50.4 18.2 4.4e-06 26.1 2.5 4.2 2 2 2 4 4 4 4 6-bladed beta-propeller MG2 PF01835.19 gi|73671050|ref|YP_307065.1| - 1.5e-09 38.2 16.3 0.37 11.3 0.3 5.8 1 1 4 5 5 5 5 MG2 domain DUF4934 PF16288.5 gi|73671050|ref|YP_307065.1| - 1.5e-08 34.5 7.5 0.0053 16.6 0.3 3.8 3 0 0 3 3 3 2 Domain of unknown function (DUF4934) Phytase-like PF13449.6 gi|73671050|ref|YP_307065.1| - 3.8e-07 30.3 0.2 2.2 8.1 0.0 5.9 3 2 3 6 6 6 1 Esterase-like activity of phytase SBBP PF06739.11 gi|73671050|ref|YP_307065.1| - 9.1e-06 25.6 38.1 0.04 13.9 0.3 7.4 7 0 0 7 7 6 5 Beta-propeller repeat ChitinaseA_N PF08329.10 gi|73671050|ref|YP_307065.1| - 2.1e-05 24.2 8.9 4.1 7.0 0.0 6.5 6 1 0 6 6 6 2 Chitinase A, N-terminal domain PKD_3 PF16820.5 gi|73671050|ref|YP_307065.1| - 3.2e-05 23.6 11.3 0.69 9.7 0.3 5.4 5 0 0 5 5 5 2 PKD-like domain Reg_prop PF07494.11 gi|73671050|ref|YP_307065.1| - 0.0004 20.3 8.6 3.3 8.2 0.1 6.4 7 1 1 8 8 5 2 Two component regulator propeller Phage_Cox PF10743.9 gi|73671050|ref|YP_307065.1| - 0.0046 17.0 4.2 13 6.0 0.1 4.2 4 0 0 4 4 4 0 Regulatory phage protein cox DUF4625 PF15418.6 gi|73671050|ref|YP_307065.1| - 0.011 15.9 6.9 43 4.3 0.1 5.2 5 0 0 5 5 5 0 Domain of unknown function (DUF4625) DUF3324 PF11797.8 gi|73671050|ref|YP_307065.1| - 0.019 14.9 13.1 4 7.4 0.4 5.1 5 0 0 5 5 5 0 Protein of unknown function C-terminal (DUF3324) PQQ PF01011.21 gi|73671050|ref|YP_307065.1| - 0.02 14.8 15.7 9.1 6.4 0.3 6.3 6 0 0 6 6 6 0 PQQ enzyme repeat Ntox33 PF15533.6 gi|73671050|ref|YP_307065.1| - 0.031 14.7 2.4 16 6.1 0.1 3.9 3 1 0 3 3 3 0 Bacterial toxin 33 SoxZ PF08770.11 gi|73671050|ref|YP_307065.1| - 0.56 10.0 12.4 9.8 6.0 0.1 5.2 5 1 1 6 6 6 0 Sulphur oxidation protein SoxZ DUF5011 PF16403.5 gi|73671050|ref|YP_307065.1| - 2.4 8.4 37.1 3.6 7.8 2.1 5.6 5 0 0 5 5 5 0 Domain of unknown function (DUF5011) IGPS PF00218.21 gi|73671051|ref|YP_307066.1| - 8.9e-65 218.4 0.2 1e-64 218.2 0.2 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 gi|73671051|ref|YP_307066.1| - 0.0011 18.5 0.0 0.0022 17.5 0.0 1.5 2 0 0 2 2 2 1 Histidine biosynthesis protein NanE PF04131.14 gi|73671051|ref|YP_307066.1| - 0.0015 17.7 0.2 0.081 12.1 0.0 3.1 3 1 1 4 4 4 1 Putative N-acetylmannosamine-6-phosphate epimerase DHO_dh PF01180.21 gi|73671051|ref|YP_307066.1| - 0.0023 17.2 0.1 0.026 13.8 0.0 2.1 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase IMPDH PF00478.25 gi|73671051|ref|YP_307066.1| - 0.015 14.3 0.0 0.027 13.5 0.0 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|73671051|ref|YP_307066.1| - 0.034 13.2 0.0 0.059 12.4 0.0 1.4 1 0 0 1 1 1 0 FMN-dependent dehydrogenase DHDPS PF00701.22 gi|73671051|ref|YP_307066.1| - 0.054 12.2 0.0 0.14 10.9 0.0 1.7 1 0 0 1 1 1 0 Dihydrodipicolinate synthetase family QRPTase_C PF01729.19 gi|73671051|ref|YP_307066.1| - 0.12 12.1 0.1 0.2 11.4 0.1 1.3 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain PALP PF00291.25 gi|73671052|ref|YP_307067.1| - 9.9e-42 143.3 1.4 1.4e-41 142.9 1.4 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Trp_syntA PF00290.20 gi|73671053|ref|YP_307068.1| - 4.1e-93 311.0 0.0 4.5e-93 310.9 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PcrB PF01884.17 gi|73671053|ref|YP_307068.1| - 5.8e-06 25.9 0.2 0.005 16.3 0.1 2.3 2 0 0 2 2 2 2 PcrB family His_biosynth PF00977.21 gi|73671053|ref|YP_307068.1| - 7.9e-05 22.2 0.1 0.00018 21.1 0.1 1.6 2 0 0 2 2 2 1 Histidine biosynthesis protein DHO_dh PF01180.21 gi|73671053|ref|YP_307068.1| - 0.0023 17.2 0.0 0.0034 16.6 0.0 1.3 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase NanE PF04131.14 gi|73671053|ref|YP_307068.1| - 0.023 13.9 0.1 0.068 12.4 0.0 1.8 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase PA PF02225.22 gi|73671053|ref|YP_307068.1| - 0.032 14.3 0.2 0.76 9.8 0.0 2.5 2 1 0 2 2 2 0 PA domain IGPS PF00218.21 gi|73671053|ref|YP_307068.1| - 0.052 12.7 0.0 0.077 12.2 0.0 1.4 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase IMPDH PF00478.25 gi|73671053|ref|YP_307068.1| - 0.054 12.5 0.1 1.4 7.8 0.0 2.2 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain TMP-TENI PF02581.17 gi|73671053|ref|YP_307068.1| - 0.094 12.0 0.0 0.78 9.0 0.0 2.4 3 0 0 3 3 3 0 Thiamine monophosphate synthase Glycos_transf_3 PF00591.21 gi|73671054|ref|YP_307069.1| - 3.3e-100 334.9 1.2 4.3e-100 334.5 1.2 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|73671054|ref|YP_307069.1| - 6e-15 54.8 0.0 1.6e-14 53.5 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain PRAI PF00697.22 gi|73671055|ref|YP_307070.1| - 1.6e-33 116.1 0.0 1.2e-31 110.1 0.0 2.0 1 1 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Glyco_transf_4 PF13439.6 gi|73671055|ref|YP_307070.1| - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Chorismate_bind PF00425.18 gi|73671056|ref|YP_307071.1| - 3.1e-94 315.4 0.0 1.3e-91 306.8 0.0 2.2 2 0 0 2 2 2 2 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|73671056|ref|YP_307071.1| - 6.6e-20 71.8 0.8 7.6e-18 65.1 0.3 3.3 2 1 0 2 2 2 1 Anthranilate synthase component I, N terminal region GATase PF00117.28 gi|73671057|ref|YP_307072.1| - 6.7e-45 153.2 0.0 7.9e-45 153.0 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|73671057|ref|YP_307072.1| - 6.8e-19 68.5 0.1 2e-18 67.0 0.1 1.7 1 1 0 1 1 1 1 Peptidase C26 FumaraseC_C PF10415.9 gi|73671058|ref|YP_307073.1| - 0.036 14.5 0.4 2 8.9 0.2 2.9 2 0 0 2 2 2 0 Fumarase C C-terminus CobU PF02283.16 gi|73671059|ref|YP_307074.1| - 0.047 13.2 0.1 0.11 12.1 0.1 1.5 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase NosD PF05048.13 gi|73671060|ref|YP_307075.1| - 2.9e-41 141.3 36.1 2.9e-41 141.3 36.1 1.9 1 1 1 2 2 2 1 Periplasmic copper-binding protein (NosD) Thioredoxin PF00085.20 gi|73671060|ref|YP_307075.1| - 1.1e-11 44.6 0.0 2.2e-11 43.7 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin Beta_helix PF13229.6 gi|73671060|ref|YP_307075.1| - 9e-11 41.9 45.0 1.5e-10 41.2 19.5 2.8 1 1 1 2 2 2 2 Right handed beta helix region Pectinesterase PF01095.19 gi|73671060|ref|YP_307075.1| - 0.00017 20.4 0.1 0.00029 19.7 0.1 1.3 1 0 0 1 1 1 1 Pectinesterase Thioredoxin_8 PF13905.6 gi|73671060|ref|YP_307075.1| - 0.017 15.4 0.0 0.047 14.0 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin-like TraF PF13728.6 gi|73671060|ref|YP_307075.1| - 0.078 12.8 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein DUF836 PF05768.14 gi|73671060|ref|YP_307075.1| - 0.079 13.4 0.0 0.16 12.4 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Bromo_TP PF07524.13 gi|73671062|ref|YP_307077.1| - 0.065 13.3 1.5 0.6 10.2 0.0 3.0 3 0 0 3 3 3 0 Bromodomain associated B12-binding_2 PF02607.17 gi|73671063|ref|YP_307078.1| - 3.8e-19 68.9 0.8 6.1e-19 68.2 0.0 1.8 2 0 0 2 2 2 1 B12 binding domain B12-binding PF02310.19 gi|73671063|ref|YP_307078.1| - 2.8e-17 62.9 0.4 5.2e-17 62.0 0.4 1.4 1 0 0 1 1 1 1 B12 binding domain Blt1 PF12754.7 gi|73671063|ref|YP_307078.1| - 0.095 13.0 0.1 0.17 12.2 0.1 1.4 1 0 0 1 1 1 0 Blt1 N-terminal domain Methyltransf_31 PF13847.6 gi|73671064|ref|YP_307079.1| - 1.6e-24 86.4 0.0 2e-24 86.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|73671064|ref|YP_307079.1| - 2.3e-22 79.5 0.0 3.4e-22 78.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73671064|ref|YP_307079.1| - 6.8e-22 78.0 0.0 1.1e-21 77.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73671064|ref|YP_307079.1| - 3.7e-19 69.3 0.0 5.6e-19 68.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73671064|ref|YP_307079.1| - 6.9e-17 61.8 0.0 1.2e-16 61.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73671064|ref|YP_307079.1| - 1.5e-11 44.1 0.0 2e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|73671064|ref|YP_307079.1| - 3.3e-09 36.5 0.0 4.7e-09 36.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 gi|73671064|ref|YP_307079.1| - 3.1e-08 33.3 0.0 5.8e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase CMAS PF02353.20 gi|73671064|ref|YP_307079.1| - 4.1e-07 29.6 0.0 5.4e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|73671064|ref|YP_307079.1| - 6.2e-06 25.8 0.0 8.8e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 gi|73671064|ref|YP_307079.1| - 3.5e-05 23.7 0.0 4.7e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GidB PF02527.15 gi|73671064|ref|YP_307079.1| - 0.00025 20.4 0.0 0.00036 19.9 0.0 1.1 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_2 PF00891.18 gi|73671064|ref|YP_307079.1| - 0.00051 19.4 0.0 0.00072 18.9 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain TehB PF03848.14 gi|73671064|ref|YP_307079.1| - 0.0011 18.4 0.0 0.0015 18.0 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB DREV PF05219.12 gi|73671064|ref|YP_307079.1| - 0.0017 17.5 0.0 0.0028 16.8 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_9 PF08003.11 gi|73671064|ref|YP_307079.1| - 0.0043 16.0 0.0 0.0056 15.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_32 PF13679.6 gi|73671064|ref|YP_307079.1| - 0.0044 17.0 0.0 0.0064 16.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CheR PF01739.18 gi|73671064|ref|YP_307079.1| - 0.0051 16.3 0.0 0.27 10.7 0.0 2.2 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain FtsJ PF01728.19 gi|73671064|ref|YP_307079.1| - 0.0075 16.4 0.0 0.046 13.8 0.0 1.9 1 1 0 1 1 1 1 FtsJ-like methyltransferase NodS PF05401.11 gi|73671064|ref|YP_307079.1| - 0.0079 15.8 0.0 0.011 15.4 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) DOT1 PF08123.13 gi|73671064|ref|YP_307079.1| - 0.012 15.2 0.0 0.02 14.4 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 RrnaAD PF00398.20 gi|73671064|ref|YP_307079.1| - 0.015 14.4 0.0 0.02 14.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_5 PF01795.19 gi|73671064|ref|YP_307079.1| - 0.023 14.2 0.0 0.041 13.4 0.0 1.3 1 1 0 1 1 1 0 MraW methylase family Methyltransf_18 PF12847.7 gi|73671064|ref|YP_307079.1| - 0.036 14.0 0.0 0.076 12.9 0.0 1.5 2 0 0 2 2 1 0 Methyltransferase domain MetW PF07021.12 gi|73671064|ref|YP_307079.1| - 0.097 12.2 0.0 0.17 11.5 0.0 1.4 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW CbiZ PF01955.18 gi|73671065|ref|YP_307080.1| - 4.5e-37 128.0 0.0 5.4e-37 127.8 0.0 1.1 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase B12-binding PF02310.19 gi|73671066|ref|YP_307081.1| - 1.4e-19 70.3 0.2 2.7e-19 69.4 0.2 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|73671066|ref|YP_307081.1| - 8.5e-15 55.0 0.2 3.2e-14 53.1 0.1 1.9 2 0 0 2 2 2 1 B12 binding domain UPF0180 PF03698.13 gi|73671066|ref|YP_307081.1| - 0.021 15.0 0.0 0.26 11.5 0.0 2.6 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0180) MtaB PF12176.8 gi|73671067|ref|YP_307082.1| - 2.4e-229 761.8 10.2 2.7e-229 761.6 10.2 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit URO-D PF01208.17 gi|73671068|ref|YP_307083.1| - 1.8e-84 283.9 0.0 2e-84 283.7 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Phosphorylase PF00343.20 gi|73671069|ref|YP_307084.1| - 8.4e-29 100.4 0.0 8e-21 74.0 0.0 2.7 2 1 0 3 3 3 2 Carbohydrate phosphorylase Capsule_synth PF05159.14 gi|73671069|ref|YP_307084.1| - 0.052 13.0 0.2 1.8 8.0 0.0 2.2 2 0 0 2 2 2 0 Capsule polysaccharide biosynthesis protein Glycos_transf_1 PF00534.20 gi|73671070|ref|YP_307085.1| - 1.4e-31 109.4 0.0 2.3e-31 108.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|73671070|ref|YP_307085.1| - 1.9e-24 86.6 0.0 3.5e-24 85.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|73671070|ref|YP_307085.1| - 2.5e-22 79.6 0.1 6.7e-22 78.3 0.0 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|73671070|ref|YP_307085.1| - 6.6e-16 59.1 0.0 1e-15 58.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|73671070|ref|YP_307085.1| - 1.5e-13 51.1 0.2 6.2e-06 26.1 0.1 2.2 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_trans_4_2 PF13477.6 gi|73671070|ref|YP_307085.1| - 1.3e-09 38.2 0.0 3e-09 37.0 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|73671070|ref|YP_307085.1| - 0.0072 16.7 0.0 0.024 15.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Macro PF01661.21 gi|73671071|ref|YP_307086.1| - 3.1e-43 146.6 0.1 3.9e-43 146.3 0.1 1.1 1 0 0 1 1 1 1 Macro domain TPR_1 PF00515.28 gi|73671072|ref|YP_307087.1| - 1.8e-253 809.3 122.1 3.6e-08 32.9 0.0 50.7 51 0 0 51 51 51 42 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73671072|ref|YP_307087.1| - 1.2e-252 796.4 134.0 6.5e-08 32.1 0.0 51.1 51 0 0 51 51 51 48 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73671072|ref|YP_307087.1| - 7.1e-190 615.5 44.5 1.9e-10 41.2 0.0 29.3 18 8 12 32 32 32 31 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73671072|ref|YP_307087.1| - 6.2e-157 497.1 119.6 4.1e-07 29.7 0.0 49.0 51 0 0 51 51 50 30 Tetratricopeptide repeat TPR_11 PF13414.6 gi|73671072|ref|YP_307087.1| - 7.7e-138 448.0 96.9 2.4e-08 33.5 0.9 42.4 12 9 31 43 43 43 29 TPR repeat TPR_9 PF13371.6 gi|73671072|ref|YP_307087.1| - 1.6e-137 447.9 26.5 3.8e-07 30.2 0.0 28.1 16 6 11 30 30 29 26 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73671072|ref|YP_307087.1| - 5.4e-137 446.5 85.8 6.5e-08 33.0 0.3 29.1 15 6 17 34 34 34 27 Tetratricopeptide repeat TPR_14 PF13428.6 gi|73671072|ref|YP_307087.1| - 1.6e-121 386.5 85.0 0.00014 22.4 0.0 45.7 7 7 40 48 48 47 28 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73671072|ref|YP_307087.1| - 2.1e-117 383.6 88.8 8.3e-09 35.6 1.0 24.1 13 7 14 27 27 27 24 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 gi|73671072|ref|YP_307087.1| - 7.4e-102 326.7 62.4 0.00023 21.3 0.1 40.5 40 1 1 41 41 41 21 Tetratricopeptide repeat TPR_6 PF13174.6 gi|73671072|ref|YP_307087.1| - 2.7e-99 319.5 89.9 0.0069 17.0 0.5 47.8 50 0 0 50 50 49 20 Tetratricopeptide repeat TPR_12 PF13424.6 gi|73671072|ref|YP_307087.1| - 2.8e-93 306.3 93.2 7.4e-06 26.2 0.2 32.0 17 7 17 34 34 33 28 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|73671072|ref|YP_307087.1| - 4.9e-68 225.0 84.6 0.00025 21.0 0.0 37.9 19 12 23 42 42 40 15 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 gi|73671072|ref|YP_307087.1| - 7.7e-58 188.4 76.8 0.00015 21.5 0.0 39.1 40 6 5 45 45 38 9 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|73671072|ref|YP_307087.1| - 7.9e-38 129.1 76.7 0.00057 19.9 1.8 22.2 6 4 13 22 22 22 12 Putative TPR-like repeat NARP1 PF12569.8 gi|73671072|ref|YP_307087.1| - 1.3e-30 106.9 78.1 0.002 17.1 0.3 21.4 5 3 14 23 23 23 12 NMDA receptor-regulated protein 1 BTAD PF03704.17 gi|73671072|ref|YP_307087.1| - 5.2e-30 104.8 55.3 0.0046 17.4 0.1 19.4 6 5 12 22 22 22 7 Bacterial transcriptional activator domain TPR_20 PF14561.6 gi|73671072|ref|YP_307087.1| - 1.4e-29 102.2 44.3 0.14 12.5 0.0 22.4 9 7 15 27 27 26 9 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 gi|73671072|ref|YP_307087.1| - 3.9e-20 71.8 10.9 0.27 10.9 0.0 15.4 9 6 13 23 23 22 3 Bacterial type III secretion protein (HrpB1_HrpK) PknG_TPR PF16918.5 gi|73671072|ref|YP_307087.1| - 4.3e-19 68.4 32.8 0.012 14.3 0.0 16.4 11 5 8 19 19 19 6 Protein kinase G tetratricopeptide repeat TPR_10 PF13374.6 gi|73671072|ref|YP_307087.1| - 2.9e-18 65.1 65.0 0.08 12.8 0.0 27.7 35 0 0 35 35 28 4 Tetratricopeptide repeat TPR_4 PF07721.14 gi|73671072|ref|YP_307087.1| - 3.2e-18 64.4 0.0 2.4 9.0 0.0 14.1 14 0 0 14 14 10 1 Tetratricopeptide repeat PPR PF01535.20 gi|73671072|ref|YP_307087.1| - 5.1e-16 57.7 47.4 0.24 11.7 0.1 23.0 27 0 0 27 27 21 1 PPR repeat TPR_15 PF13429.6 gi|73671072|ref|YP_307087.1| - 1.6e-15 57.1 44.2 0.00012 21.4 0.5 14.4 6 3 5 12 12 12 4 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|73671072|ref|YP_307087.1| - 2.4e-12 46.9 49.7 0.36 10.2 0.0 16.0 10 4 6 19 19 18 4 Coatomer epsilon subunit Paf67 PF10255.9 gi|73671072|ref|YP_307087.1| - 8.4e-12 44.8 15.5 0.52 9.3 0.0 11.7 10 4 3 14 14 13 2 RNA polymerase I-associated factor PAF67 MIT PF04212.18 gi|73671072|ref|YP_307087.1| - 3.8e-09 36.5 65.0 3.4 7.8 0.0 24.1 29 1 0 29 29 25 1 MIT (microtubule interacting and transport) domain DUF3856 PF12968.7 gi|73671072|ref|YP_307087.1| - 6.6e-09 36.0 48.6 3 7.9 0.1 22.3 14 10 9 24 24 21 1 Domain of Unknown Function (DUF3856) TPR_3 PF07720.12 gi|73671072|ref|YP_307087.1| - 1.8e-08 34.2 50.4 0.56 10.3 0.0 19.3 23 0 0 23 23 18 3 Tetratricopeptide repeat YfiO PF13525.6 gi|73671072|ref|YP_307087.1| - 5.9e-08 32.7 37.9 0.018 14.8 0.4 15.1 10 4 8 18 18 18 1 Outer membrane lipoprotein Wzy_C_2 PF11846.8 gi|73671072|ref|YP_307087.1| - 8.1e-08 32.4 5.1 1.4 8.8 0.0 8.0 8 0 0 8 8 8 2 Virulence factor membrane-bound polymerase, C-terminal Alkyl_sulf_dimr PF14863.6 gi|73671072|ref|YP_307087.1| - 1.8e-06 28.4 17.0 20 5.6 0.0 11.6 10 4 2 13 13 11 0 Alkyl sulfatase dimerisation ChAPs PF09295.10 gi|73671072|ref|YP_307087.1| - 5.6e-05 22.3 14.5 0.027 13.5 0.0 7.1 8 1 1 9 9 9 1 ChAPs (Chs5p-Arf1p-binding proteins) ANAPC5 PF12862.7 gi|73671072|ref|YP_307087.1| - 0.0013 18.8 19.7 1.9 8.6 0.1 12.7 11 5 2 13 13 10 1 Anaphase-promoting complex subunit 5 DUF627 PF04781.12 gi|73671072|ref|YP_307087.1| - 0.0051 16.8 10.7 7.8 6.6 0.1 9.4 11 2 1 12 12 8 0 Protein of unknown function (DUF627) TOM20_plant PF06552.12 gi|73671072|ref|YP_307087.1| - 0.006 16.3 29.6 14 5.4 0.0 12.9 13 2 1 14 14 12 0 Plant specific mitochondrial import receptor subunit TOM20 PPR_2 PF13041.6 gi|73671072|ref|YP_307087.1| - 0.0075 16.4 22.3 3.5 7.9 0.0 13.6 17 1 1 18 18 12 1 PPR repeat family Mhr1 PF12829.7 gi|73671072|ref|YP_307087.1| - 0.012 15.6 0.5 12 6.0 0.1 4.9 3 1 1 4 4 3 0 Transcriptional regulation of mitochondrial recombination Type_III_YscG PF09477.10 gi|73671072|ref|YP_307087.1| - 0.018 15.1 1.2 2.4 8.3 0.0 4.9 5 0 0 5 5 3 0 Bacterial type II secretion system chaperone protein (type_III_yscG) PPTA PF01239.22 gi|73671072|ref|YP_307087.1| - 0.35 10.7 6.3 27 4.7 0.0 6.2 6 0 0 6 6 5 0 Protein prenyltransferase alpha subunit repeat LMBR1 PF04791.16 gi|73671072|ref|YP_307087.1| - 0.62 8.9 3.4 1.4 7.7 3.4 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein Presenilin PF01080.17 gi|73671072|ref|YP_307087.1| - 2.8 6.6 5.5 5.5 5.6 5.5 1.4 1 0 0 1 1 1 0 Presenilin Yae1_N PF09811.9 gi|73671073|ref|YP_307088.1| - 3e-10 39.6 17.4 0.0014 18.3 5.6 4.4 4 1 0 4 4 4 3 Essential protein Yae1, N terminal Trigger_N PF05697.13 gi|73671073|ref|YP_307088.1| - 0.18 12.2 0.8 12 6.2 0.0 2.2 2 0 0 2 2 2 0 Bacterial trigger factor protein (TF) NVEALA PF14055.6 gi|73671073|ref|YP_307088.1| - 0.62 10.1 2.1 0.49 10.4 0.4 1.7 2 0 0 2 2 2 0 NVEALA protein Acyl_transf_3 PF01757.22 gi|73671074|ref|YP_307089.1| - 4e-35 121.5 44.3 5.1e-35 121.1 44.3 1.1 1 0 0 1 1 1 1 Acyltransferase family DUF1624 PF07786.12 gi|73671074|ref|YP_307089.1| - 1.8e-07 31.0 26.5 0.00034 20.2 24.8 3.2 1 1 1 2 2 2 1 Protein of unknown function (DUF1624) DUF2341 PF10102.9 gi|73671075|ref|YP_307090.1| - 0.0021 18.6 0.7 0.0021 18.6 0.7 4.8 5 0 0 5 5 5 1 Domain of unknown function (DUF2341) Herpes_TK_C PF08465.10 gi|73671075|ref|YP_307090.1| - 0.013 15.2 0.1 0.037 13.7 0.1 1.8 1 0 0 1 1 1 0 Thymidine kinase from Herpesvirus C-terminal PocR PF10114.9 gi|73671076|ref|YP_307091.1| - 2.5e-28 98.9 0.1 3.6e-28 98.4 0.1 1.3 1 0 0 1 1 1 1 Sensory domain found in PocR Glyco_tranf_2_3 PF13641.6 gi|73671077|ref|YP_307092.1| - 6.2e-24 85.2 0.3 8.2e-24 84.8 0.3 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|73671077|ref|YP_307092.1| - 2.5e-23 82.8 0.3 3.5e-23 82.3 0.3 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|73671077|ref|YP_307092.1| - 3.8e-10 40.0 5.8 7.1e-10 39.1 5.8 1.5 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|73671077|ref|YP_307092.1| - 1.6e-07 31.0 1.1 8.5e-07 28.6 0.2 2.3 2 1 0 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|73671077|ref|YP_307092.1| - 4.3e-06 27.2 0.1 9e-06 26.1 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|73671077|ref|YP_307092.1| - 1.5e-05 24.6 0.5 2.3e-05 24.0 0.5 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Chitin_synth_2 PF03142.15 gi|73671077|ref|YP_307092.1| - 0.0032 16.2 2.1 0.013 14.1 2.1 2.1 1 1 0 1 1 1 1 Chitin synthase Cation_efflux PF01545.21 gi|73671078|ref|YP_307093.1| - 5.4e-42 143.8 12.0 6.9e-42 143.4 12.0 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|73671078|ref|YP_307093.1| - 3.3e-18 65.6 0.3 7.1e-18 64.5 0.3 1.6 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF2104 PF09877.9 gi|73671078|ref|YP_307093.1| - 0.11 12.7 0.4 0.11 12.7 0.4 2.7 2 2 0 2 2 2 0 Predicted membrane protein (DUF2104) NAC PF01849.18 gi|73671079|ref|YP_307094.1| - 4.1e-18 65.1 5.0 6.8e-18 64.4 5.0 1.4 1 0 0 1 1 1 1 NAC domain UBA_4 PF14555.6 gi|73671079|ref|YP_307094.1| - 0.00022 21.0 0.1 0.00031 20.5 0.1 1.2 1 0 0 1 1 1 1 UBA-like domain DUF1257 PF06868.11 gi|73671079|ref|YP_307094.1| - 0.035 14.4 0.1 0.041 14.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1257) IL2 PF00715.17 gi|73671079|ref|YP_307094.1| - 0.038 13.9 0.4 0.072 13.0 0.3 1.5 1 1 0 1 1 1 0 Interleukin 2 Cu_amine_oxidN1 PF07833.11 gi|73671079|ref|YP_307094.1| - 0.046 14.2 0.5 0.059 13.9 0.5 1.2 1 0 0 1 1 1 0 Copper amine oxidase N-terminal domain HOIP-UBA PF16678.5 gi|73671079|ref|YP_307094.1| - 0.084 12.9 0.4 0.11 12.5 0.2 1.5 1 1 0 1 1 1 0 HOIP UBA domain pair ANTAR PF03861.14 gi|73671079|ref|YP_307094.1| - 0.16 11.8 2.0 0.75 9.7 0.2 2.8 3 1 0 3 3 3 0 ANTAR domain CUE PF02845.16 gi|73671079|ref|YP_307094.1| - 0.16 11.7 1.7 0.4 10.4 0.1 2.4 2 1 1 3 3 3 0 CUE domain Fe-S_biosyn PF01521.20 gi|73671080|ref|YP_307095.1| - 2e-14 53.8 0.0 2.3e-14 53.5 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis GDE_C PF06202.14 gi|73671082|ref|YP_307097.1| - 2.3e-139 464.6 0.1 4.3e-139 463.7 0.0 1.4 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|73671082|ref|YP_307097.1| - 6.5e-69 231.7 0.0 9e-69 231.2 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal Glyco_hydro_100 PF12899.7 gi|73671082|ref|YP_307097.1| - 0.0017 17.1 0.2 0.5 9.0 0.0 2.6 2 1 0 2 2 2 2 Alkaline and neutral invertase DUF608 PF04685.13 gi|73671082|ref|YP_307097.1| - 0.0084 15.3 0.1 0.015 14.5 0.1 1.3 1 0 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Glyco_hydro_63 PF03200.16 gi|73671082|ref|YP_307097.1| - 0.04 12.7 0.0 0.41 9.3 0.0 2.0 1 1 1 2 2 2 0 Glycosyl hydrolase family 63 C-terminal domain PRA-CH PF01502.18 gi|73671083|ref|YP_307098.1| - 4.3e-37 125.8 1.0 5.7e-37 125.4 1.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase tRNA_anti-like PF12869.7 gi|73671084|ref|YP_307099.1| - 0.0018 17.9 0.8 0.0022 17.7 0.8 1.1 1 0 0 1 1 1 1 tRNA_anti-like Myticin-prepro PF10690.9 gi|73671084|ref|YP_307099.1| - 0.0073 16.5 0.8 0.0073 16.5 0.8 2.2 2 0 0 2 2 2 1 Myticin pre-proprotein from the mussel GRP PF07172.11 gi|73671084|ref|YP_307099.1| - 0.12 13.0 2.7 0.68 10.7 2.7 1.9 1 1 0 1 1 1 0 Glycine rich protein family O-antigen_lig PF13425.6 gi|73671084|ref|YP_307099.1| - 0.15 10.8 0.8 0.17 10.6 0.8 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF4277 PF14104.6 gi|73671085|ref|YP_307100.1| - 3.2e-38 130.4 0.0 6.2e-38 129.5 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.21 gi|73671085|ref|YP_307100.1| - 1.4e-14 54.3 3.6 5.9e-14 52.2 3.6 1.9 1 1 0 1 1 1 1 Transposase DDE domain Glucos_trans_II PF14264.6 gi|73671086|ref|YP_307101.1| - 0.019 14.3 35.3 0.019 14.3 29.2 2.2 1 1 1 2 2 2 0 Glucosyl transferase GtrII DUF4131 PF13567.6 gi|73671086|ref|YP_307101.1| - 0.34 10.5 7.5 1 9.0 0.9 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4131) Ureide_permease PF07168.11 gi|73671087|ref|YP_307102.1| - 7.3 5.2 7.5 0.2 10.3 0.3 1.9 2 0 0 2 2 2 0 Ureide permease PGF-CTERM PF18204.1 gi|73671088|ref|YP_307103.1| - 1.2e-06 28.2 1.7 2.7e-06 27.2 1.7 1.6 1 0 0 1 1 1 1 PGF-CTERM motif Hydrolase_4 PF12146.8 gi|73671089|ref|YP_307104.1| - 0.00062 19.1 0.0 0.0045 16.3 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|73671089|ref|YP_307104.1| - 0.0038 16.9 0.0 0.0076 15.9 0.0 1.6 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF915 PF06028.11 gi|73671089|ref|YP_307104.1| - 0.012 15.0 0.0 0.022 14.1 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) Abhydrolase_6 PF12697.7 gi|73671089|ref|YP_307104.1| - 0.054 14.1 0.0 0.068 13.8 0.0 1.3 1 1 0 1 1 1 0 Alpha/beta hydrolase family MatE PF01554.18 gi|73671090|ref|YP_307105.1| - 2.4e-23 82.6 18.5 2.5e-23 82.5 15.5 1.9 2 0 0 2 2 2 1 MatE Fun_ATP-synt_8 PF05933.13 gi|73671090|ref|YP_307105.1| - 0.51 10.6 0.0 0.51 10.6 0.0 2.9 4 0 0 4 4 4 0 Fungal ATP synthase protein 8 (A6L) HxlR PF01638.17 gi|73671091|ref|YP_307106.1| - 1.1e-24 86.0 0.9 1.4e-24 85.8 0.9 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_34 PF13601.6 gi|73671091|ref|YP_307106.1| - 0.00026 21.1 0.1 0.00033 20.8 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain PadR PF03551.14 gi|73671091|ref|YP_307106.1| - 0.00095 19.1 0.0 0.0019 18.1 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|73671091|ref|YP_307106.1| - 0.0041 17.1 0.1 0.0066 16.4 0.1 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DUF505 PF04458.12 gi|73671091|ref|YP_307106.1| - 0.0045 15.4 0.4 0.005 15.3 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF505) DUF4423 PF14394.6 gi|73671091|ref|YP_307106.1| - 0.0075 16.0 0.1 0.0091 15.7 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) DUF2513 PF10711.9 gi|73671091|ref|YP_307106.1| - 0.0077 16.5 0.3 0.011 16.0 0.3 1.2 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) MarR PF01047.22 gi|73671091|ref|YP_307106.1| - 0.048 13.6 0.1 0.076 13.0 0.1 1.3 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.20 gi|73671091|ref|YP_307106.1| - 0.14 12.5 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator NIR_SIR PF01077.22 gi|73671092|ref|YP_307107.1| - 2.1e-30 105.3 0.0 2.9e-30 104.9 0.0 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|73671092|ref|YP_307107.1| - 7.9e-16 57.7 0.0 1.4e-15 56.9 0.0 1.4 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Cupin_2 PF07883.11 gi|73671093|ref|YP_307108.1| - 1.1e-13 50.7 0.0 1.5e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|73671093|ref|YP_307108.1| - 0.00045 20.1 0.0 0.00054 19.9 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|73671093|ref|YP_307108.1| - 0.0099 15.8 0.0 0.011 15.6 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Pirin_C PF05726.13 gi|73671093|ref|YP_307108.1| - 0.089 13.2 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Pirin C-terminal cupin domain DUF4585 PF15232.6 gi|73671093|ref|YP_307108.1| - 0.14 12.3 0.0 0.4 10.8 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4585) CGGC PF08821.11 gi|73671094|ref|YP_307109.1| - 2.8e-36 123.9 1.5 3.1e-36 123.8 1.5 1.0 1 0 0 1 1 1 1 CGGC domain Fer4_21 PF14697.6 gi|73671096|ref|YP_307111.1| - 0.0019 18.3 0.6 0.0019 18.3 0.6 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|73671096|ref|YP_307111.1| - 0.0033 17.4 0.3 0.0042 17.1 0.3 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4 PF00037.27 gi|73671096|ref|YP_307111.1| - 0.0041 16.9 1.0 0.0041 16.9 1.0 1.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|73671096|ref|YP_307111.1| - 0.0043 17.1 2.5 0.013 15.5 2.5 1.7 1 1 0 1 1 1 1 4Fe-4S binding domain YhfH PF14149.6 gi|73671096|ref|YP_307111.1| - 0.037 14.0 0.9 0.043 13.8 0.9 1.2 1 0 0 1 1 1 0 YhfH-like protein Hemerythrin PF01814.23 gi|73671097|ref|YP_307112.1| - 9.3e-18 65.1 1.3 1.3e-17 64.6 1.3 1.2 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain TrmB PF01978.19 gi|73671098|ref|YP_307113.1| - 1.3e-21 76.2 0.1 3.3e-21 75.0 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|73671098|ref|YP_307113.1| - 0.026 14.5 0.0 0.053 13.5 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family PLDc_2 PF13091.6 gi|73671098|ref|YP_307113.1| - 0.068 13.1 0.0 1.7 8.6 0.0 2.3 2 0 0 2 2 2 0 PLD-like domain Spore_SspJ PF09575.10 gi|73671098|ref|YP_307113.1| - 0.17 12.3 0.7 0.36 11.2 0.7 1.4 1 0 0 1 1 1 0 Small spore protein J (Spore_SspJ) CMD PF02627.20 gi|73671099|ref|YP_307114.1| - 6.8e-17 61.3 0.1 8.8e-17 60.9 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SapB_1 PF05184.15 gi|73671099|ref|YP_307114.1| - 0.01 15.8 0.2 0.024 14.7 0.2 1.6 1 0 0 1 1 1 0 Saposin-like type B, region 1 Haem_oxygenas_2 PF14518.6 gi|73671099|ref|YP_307114.1| - 0.073 12.8 2.3 0.12 12.1 2.3 1.5 1 1 0 1 1 1 0 Iron-containing redox enzyme ABC_tran PF00005.27 gi|73671100|ref|YP_307115.1| - 6.2e-33 114.2 0.0 8.9e-33 113.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|73671100|ref|YP_307115.1| - 1.5e-10 41.4 0.2 4.3e-09 36.7 0.2 2.2 1 1 0 1 1 1 1 AAA domain oligo_HPY PF08352.12 gi|73671100|ref|YP_307115.1| - 5.2e-09 36.5 0.0 1e-08 35.6 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|73671100|ref|YP_307115.1| - 0.00012 21.6 0.4 0.0032 17.0 0.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|73671100|ref|YP_307115.1| - 0.00028 20.8 0.0 0.00065 19.6 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase Hpr_kinase_C PF07475.12 gi|73671100|ref|YP_307115.1| - 0.00041 19.9 0.1 0.00076 19.0 0.1 1.4 1 0 0 1 1 1 1 HPr Serine kinase C-terminal domain AAA_16 PF13191.6 gi|73671100|ref|YP_307115.1| - 0.00047 20.6 0.2 0.0012 19.3 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|73671100|ref|YP_307115.1| - 0.00066 20.1 0.1 0.0098 16.3 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 gi|73671100|ref|YP_307115.1| - 0.00091 18.5 0.0 0.0012 18.1 0.0 1.2 1 0 0 1 1 1 1 NB-ARC domain Rad17 PF03215.15 gi|73671100|ref|YP_307115.1| - 0.0014 18.6 0.1 0.056 13.4 0.0 2.2 2 0 0 2 2 2 1 Rad17 P-loop domain NACHT PF05729.12 gi|73671100|ref|YP_307115.1| - 0.0015 18.4 0.0 0.0032 17.4 0.0 1.5 1 0 0 1 1 1 1 NACHT domain TniB PF05621.11 gi|73671100|ref|YP_307115.1| - 0.0027 17.1 0.1 0.33 10.3 0.1 2.2 2 0 0 2 2 2 1 Bacterial TniB protein AAA_21 PF13304.6 gi|73671100|ref|YP_307115.1| - 0.0036 17.2 0.0 1.1 9.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RNA_helicase PF00910.22 gi|73671100|ref|YP_307115.1| - 0.0071 16.7 0.0 0.013 15.8 0.0 1.5 1 0 0 1 1 1 1 RNA helicase AAA_29 PF13555.6 gi|73671100|ref|YP_307115.1| - 0.0081 15.9 0.0 0.016 14.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_10 PF12846.7 gi|73671100|ref|YP_307115.1| - 0.009 15.0 0.0 0.02 13.8 0.0 1.6 1 1 0 1 1 1 1 AAA-like domain DUF87 PF01935.17 gi|73671100|ref|YP_307115.1| - 0.0092 16.1 0.0 0.02 15.0 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain ATP-synt_ab PF00006.25 gi|73671100|ref|YP_307115.1| - 0.012 15.2 0.1 0.012 15.2 0.1 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain MMR_HSR1 PF01926.23 gi|73671100|ref|YP_307115.1| - 0.014 15.5 0.0 0.026 14.6 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase DEAD PF00270.29 gi|73671100|ref|YP_307115.1| - 0.015 15.1 0.1 0.41 10.4 0.0 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_33 PF13671.6 gi|73671100|ref|YP_307115.1| - 0.015 15.5 0.0 0.029 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|73671100|ref|YP_307115.1| - 0.021 14.4 0.3 0.32 10.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|73671100|ref|YP_307115.1| - 0.044 13.5 0.0 0.073 12.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Sigma54_activat PF00158.26 gi|73671100|ref|YP_307115.1| - 0.045 13.5 0.0 0.12 12.1 0.0 1.7 2 0 0 2 2 1 0 Sigma-54 interaction domain ATPase_2 PF01637.18 gi|73671100|ref|YP_307115.1| - 0.047 13.6 0.0 0.068 13.1 0.0 1.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|73671100|ref|YP_307115.1| - 0.048 13.4 0.0 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|73671100|ref|YP_307115.1| - 0.053 12.8 0.0 0.11 11.7 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_18 PF13238.6 gi|73671100|ref|YP_307115.1| - 0.057 14.0 0.0 0.15 12.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain DUF2527 PF10736.9 gi|73671100|ref|YP_307115.1| - 0.062 13.1 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) Mg_chelatase PF01078.21 gi|73671100|ref|YP_307115.1| - 0.081 12.3 0.0 0.2 11.0 0.0 1.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI NTPase_1 PF03266.15 gi|73671100|ref|YP_307115.1| - 0.085 12.8 0.2 1.1 9.2 0.1 2.2 2 0 0 2 2 2 0 NTPase AAA_7 PF12775.7 gi|73671100|ref|YP_307115.1| - 0.086 12.4 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_28 PF13521.6 gi|73671100|ref|YP_307115.1| - 0.088 13.0 0.1 0.45 10.8 0.0 2.1 2 1 0 2 2 2 0 AAA domain MobB PF03205.14 gi|73671100|ref|YP_307115.1| - 0.12 12.3 0.1 0.28 11.1 0.0 1.7 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B IstB_IS21 PF01695.17 gi|73671100|ref|YP_307115.1| - 0.13 12.0 0.1 0.61 9.8 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein TsaE PF02367.17 gi|73671100|ref|YP_307115.1| - 0.15 12.1 0.1 0.28 11.2 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 gi|73671100|ref|YP_307115.1| - 0.15 11.7 0.0 6.6 6.4 0.0 2.2 2 1 0 2 2 2 0 AAA domain dNK PF01712.19 gi|73671100|ref|YP_307115.1| - 0.16 11.8 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Deoxynucleoside kinase ABC_tran PF00005.27 gi|73671101|ref|YP_307116.1| - 3.8e-19 69.6 0.0 5.1e-19 69.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|73671101|ref|YP_307116.1| - 7e-16 58.5 0.2 2.1e-15 57.0 0.2 1.8 2 0 0 2 2 2 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_29 PF13555.6 gi|73671101|ref|YP_307116.1| - 3.6e-05 23.4 0.0 6.8e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|73671101|ref|YP_307116.1| - 0.00019 21.4 0.0 0.35 10.6 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Mg_chelatase PF01078.21 gi|73671101|ref|YP_307116.1| - 0.0028 17.1 0.0 0.0052 16.2 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|73671101|ref|YP_307116.1| - 0.04 14.3 0.0 0.068 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|73671101|ref|YP_307116.1| - 0.042 14.1 0.0 0.16 12.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 gi|73671101|ref|YP_307116.1| - 0.052 13.0 0.3 0.39 10.1 0.3 2.0 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 gi|73671101|ref|YP_307116.1| - 0.11 12.4 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 NACHT domain BPD_transp_1 PF00528.22 gi|73671102|ref|YP_307117.1| - 3.9e-29 101.7 18.1 4.2e-29 101.6 11.2 2.1 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|73671102|ref|YP_307117.1| - 1.4e-07 31.4 0.2 1.4e-07 31.4 0.2 3.2 3 1 1 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|73671103|ref|YP_307118.1| - 3.7e-39 134.4 13.3 3.7e-39 134.4 13.3 1.8 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2937 PF11157.8 gi|73671103|ref|YP_307118.1| - 5.2 6.8 6.1 19 4.9 0.3 2.7 2 1 0 3 3 3 0 Protein of unknown function (DUF2937) Methyltransf_11 PF08241.12 gi|73671104|ref|YP_307119.1| - 8.3e-26 90.5 0.0 1.4e-25 89.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73671104|ref|YP_307119.1| - 7.2e-24 84.3 0.0 1.4e-23 83.4 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73671104|ref|YP_307119.1| - 5.3e-20 71.8 0.0 6.4e-20 71.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73671104|ref|YP_307119.1| - 5.7e-15 55.3 0.0 1.7e-14 53.8 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|73671104|ref|YP_307119.1| - 8.9e-14 51.7 0.0 1.4e-13 51.0 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|73671104|ref|YP_307119.1| - 8.4e-11 42.5 0.0 1.3e-10 41.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|73671104|ref|YP_307119.1| - 4e-08 33.0 0.0 6.6e-08 32.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.20 gi|73671104|ref|YP_307119.1| - 1.7e-06 27.3 0.0 2.2e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.19 gi|73671104|ref|YP_307119.1| - 4.8e-06 26.5 0.0 8.3e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 gi|73671104|ref|YP_307119.1| - 2.9e-05 23.6 0.0 4.2e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 gi|73671104|ref|YP_307119.1| - 0.00013 21.4 0.0 0.00017 21.0 0.0 1.3 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase NodS PF05401.11 gi|73671104|ref|YP_307119.1| - 0.00037 20.2 0.0 0.00048 19.8 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_18 PF12847.7 gi|73671104|ref|YP_307119.1| - 0.00096 19.1 0.0 0.0015 18.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|73671104|ref|YP_307119.1| - 0.002 17.5 0.0 0.0028 17.0 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain TehB PF03848.14 gi|73671104|ref|YP_307119.1| - 0.0021 17.5 0.0 0.0037 16.7 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB TPMT PF05724.11 gi|73671104|ref|YP_307119.1| - 0.0067 16.1 0.0 0.0098 15.6 0.0 1.3 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) GidB PF02527.15 gi|73671104|ref|YP_307119.1| - 0.0067 15.8 0.0 0.01 15.1 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_15 PF09445.10 gi|73671104|ref|YP_307119.1| - 0.0075 15.9 0.0 0.012 15.1 0.0 1.4 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase DREV PF05219.12 gi|73671104|ref|YP_307119.1| - 0.0078 15.3 0.0 0.011 14.9 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_32 PF13679.6 gi|73671104|ref|YP_307119.1| - 0.03 14.3 0.0 0.042 13.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain 3HCDH_N PF02737.18 gi|73671104|ref|YP_307119.1| - 0.036 14.0 0.0 0.052 13.4 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UPF0020 PF01170.18 gi|73671104|ref|YP_307119.1| - 0.11 12.2 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 SAM_MT PF04445.13 gi|73671104|ref|YP_307119.1| - 0.19 11.1 0.1 0.34 10.3 0.0 1.4 1 1 0 1 1 1 0 Putative SAM-dependent methyltransferase SBP_bac_5 PF00496.22 gi|73671105|ref|YP_307120.1| - 4.6e-94 315.5 6.4 5.8e-94 315.1 6.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle SBP_bac_5 PF00496.22 gi|73671106|ref|YP_307121.1| - 2.3e-89 300.0 1.5 2.8e-89 299.7 1.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Methyltransf_11 PF08241.12 gi|73671107|ref|YP_307122.1| - 1.7e-24 86.3 0.0 2.8e-24 85.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|73671107|ref|YP_307122.1| - 3.5e-23 82.1 0.0 5.6e-23 81.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|73671107|ref|YP_307122.1| - 1.8e-22 79.8 0.0 2.4e-22 79.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|73671107|ref|YP_307122.1| - 2.6e-15 56.7 0.0 3.2e-15 56.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|73671107|ref|YP_307122.1| - 2.7e-13 49.8 0.0 3.7e-13 49.4 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|73671107|ref|YP_307122.1| - 5.9e-12 46.2 0.0 1e-11 45.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|73671107|ref|YP_307122.1| - 4.6e-07 29.5 0.0 6.2e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|73671107|ref|YP_307122.1| - 6.5e-07 29.0 0.1 1.5e-06 27.9 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase small domain GidB PF02527.15 gi|73671107|ref|YP_307122.1| - 6.5e-05 22.3 0.0 9.8e-05 21.7 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PCMT PF01135.19 gi|73671107|ref|YP_307122.1| - 0.00015 21.6 0.0 0.00021 21.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TehB PF03848.14 gi|73671107|ref|YP_307122.1| - 0.00015 21.2 0.0 0.0002 20.8 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_32 PF13679.6 gi|73671107|ref|YP_307122.1| - 0.00053 20.0 0.0 0.00082 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|73671107|ref|YP_307122.1| - 0.00081 19.1 0.0 0.0013 18.5 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_2 PF00891.18 gi|73671107|ref|YP_307122.1| - 0.001 18.4 0.0 0.0013 18.1 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain TPMT PF05724.11 gi|73671107|ref|YP_307122.1| - 0.0034 17.1 0.0 0.0049 16.5 0.0 1.4 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) NodS PF05401.11 gi|73671107|ref|YP_307122.1| - 0.005 16.5 0.0 0.0066 16.1 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.20 gi|73671107|ref|YP_307122.1| - 0.0097 15.2 0.0 0.016 14.5 0.0 1.3 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase N2227 PF07942.12 gi|73671107|ref|YP_307122.1| - 0.013 14.7 0.0 0.17 11.0 0.0 2.0 1 1 1 2 2 2 0 N2227-like protein Methyltransf_18 PF12847.7 gi|73671107|ref|YP_307122.1| - 0.014 15.4 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_PK PF05891.12 gi|73671107|ref|YP_307122.1| - 0.02 14.4 0.0 0.028 13.9 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Mur_ligase PF01225.25 gi|73671107|ref|YP_307122.1| - 0.036 14.4 0.0 0.079 13.3 0.0 1.5 1 0 0 1 1 1 0 Mur ligase family, catalytic domain Methyltransf_3 PF01596.17 gi|73671107|ref|YP_307122.1| - 0.04 13.1 0.0 0.082 12.1 0.0 1.5 1 1 0 1 1 1 0 O-methyltransferase Methyltransf_8 PF05148.15 gi|73671107|ref|YP_307122.1| - 0.049 13.5 0.0 0.13 12.1 0.0 1.5 1 1 0 1 1 1 0 Hypothetical methyltransferase MetW PF07021.12 gi|73671107|ref|YP_307122.1| - 0.056 13.0 0.0 0.083 12.5 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_15 PF09445.10 gi|73671107|ref|YP_307122.1| - 0.06 12.9 0.0 0.087 12.4 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase AdoMet_MTase PF07757.13 gi|73671107|ref|YP_307122.1| - 0.068 13.5 0.0 0.14 12.5 0.0 1.6 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase adh_short PF00106.25 gi|73671107|ref|YP_307122.1| - 0.076 12.5 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 short chain dehydrogenase Methyltransf_16 PF10294.9 gi|73671107|ref|YP_307122.1| - 0.096 12.4 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 Lysine methyltransferase RrnaAD PF00398.20 gi|73671107|ref|YP_307122.1| - 0.098 11.7 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Adhesin_P1_N PF18652.1 gi|73671107|ref|YP_307122.1| - 0.13 12.3 0.4 0.22 11.6 0.4 1.3 1 0 0 1 1 1 0 Adhesin P1 N-terminal domain Methyltransf_4 PF02390.17 gi|73671107|ref|YP_307122.1| - 0.14 11.6 0.0 0.54 9.7 0.1 1.8 2 0 0 2 2 2 0 Putative methyltransferase ADH_zinc_N PF00107.26 gi|73671107|ref|YP_307122.1| - 0.15 12.0 0.1 0.49 10.4 0.1 1.9 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DUF4139 PF13598.6 gi|73671108|ref|YP_307123.1| - 2.9e-10 40.2 0.1 5e-10 39.4 0.1 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4139) SM-ATX PF14438.6 gi|73671108|ref|YP_307123.1| - 0.00094 19.3 0.1 0.0026 17.9 0.1 1.8 1 0 0 1 1 1 1 Ataxin 2 SM domain DUF4140 PF13600.6 gi|73671108|ref|YP_307123.1| - 0.0036 17.7 0.2 0.016 15.6 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of unknown function (DUF4140) DUF150_C PF17384.2 gi|73671108|ref|YP_307123.1| - 0.0064 16.6 0.1 0.023 14.8 0.1 1.9 1 0 0 1 1 1 1 RimP C-terminal SH3 domain LTD PF00932.19 gi|73671108|ref|YP_307123.1| - 0.019 15.3 0.7 0.067 13.6 0.2 2.3 2 1 0 2 2 2 0 Lamin Tail Domain LSM PF01423.22 gi|73671108|ref|YP_307123.1| - 0.091 12.5 0.1 0.23 11.2 0.1 1.7 1 0 0 1 1 1 0 LSM domain UPF0228 PF05727.11 gi|73671109|ref|YP_307124.1| - 5.2e-42 142.6 5.8 5.2e-42 142.6 5.8 1.5 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0228) Peptidase_C39_2 PF13529.6 gi|73671111|ref|YP_307126.1| - 1.9e-13 51.2 0.3 4.7e-13 49.9 0.3 1.7 1 0 0 1 1 1 1 Peptidase_C39 like family Ribosomal_S10 PF00338.22 gi|73671112|ref|YP_307127.1| - 3.3e-27 94.6 0.0 3.7e-27 94.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 gi|73671112|ref|YP_307127.1| - 0.052 14.4 0.0 0.12 13.2 0.0 1.6 2 0 0 2 2 2 0 Primosomal protein N C-terminal domain GTP_EFTU PF00009.27 gi|73671113|ref|YP_307128.1| - 1e-56 191.6 0.1 1.3e-56 191.3 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|73671113|ref|YP_307128.1| - 1.4e-36 125.2 0.1 3.3e-36 124.0 0.1 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|73671113|ref|YP_307128.1| - 2.2e-15 56.8 2.3 4.5e-15 55.8 0.9 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|73671113|ref|YP_307128.1| - 6.1e-06 26.3 0.0 7.7e-05 22.8 0.0 2.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 gi|73671113|ref|YP_307128.1| - 0.0005 19.9 0.5 0.0013 18.6 0.5 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Gtr1_RagA PF04670.12 gi|73671113|ref|YP_307128.1| - 0.0055 16.1 0.0 0.075 12.4 0.0 2.0 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Dynamin_N PF00350.23 gi|73671113|ref|YP_307128.1| - 0.013 15.6 0.0 4.1 7.4 0.0 2.4 1 1 1 2 2 2 0 Dynamin family Roc PF08477.13 gi|73671113|ref|YP_307128.1| - 0.042 14.1 0.0 3.7 7.8 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase FeoB_N PF02421.18 gi|73671113|ref|YP_307128.1| - 0.046 13.2 0.1 0.63 9.6 0.1 2.5 2 1 0 2 2 2 0 Ferrous iron transport protein B NTP_transf_3 PF12804.7 gi|73671113|ref|YP_307128.1| - 0.12 12.8 0.0 0.22 11.9 0.0 1.5 1 0 0 1 1 1 0 MobA-like NTP transferase domain Septin PF00735.18 gi|73671113|ref|YP_307128.1| - 0.16 11.2 0.0 0.43 9.8 0.0 1.6 1 1 0 1 1 1 0 Septin GTP_EFTU PF00009.27 gi|73671114|ref|YP_307129.1| - 3.4e-65 219.2 0.3 5.5e-65 218.6 0.3 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|73671114|ref|YP_307129.1| - 1.9e-28 98.7 0.3 2.8e-27 94.9 0.0 2.6 1 1 1 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 gi|73671114|ref|YP_307129.1| - 4.8e-25 87.4 0.0 1.5e-24 85.9 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 gi|73671114|ref|YP_307129.1| - 5.4e-24 84.1 1.2 5.4e-24 84.1 1.2 2.1 2 0 0 2 2 2 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 gi|73671114|ref|YP_307129.1| - 1.1e-15 57.8 0.2 3.7e-15 56.1 0.2 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|73671114|ref|YP_307129.1| - 5.4e-05 23.3 0.0 0.00016 21.8 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 gi|73671114|ref|YP_307129.1| - 0.0015 18.4 0.0 0.0034 17.2 0.0 1.6 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain SRPRB PF09439.10 gi|73671114|ref|YP_307129.1| - 0.033 13.6 0.2 0.39 10.1 0.1 2.5 2 1 0 2 2 2 0 Signal recognition particle receptor beta subunit TRADD_N PF09034.10 gi|73671114|ref|YP_307129.1| - 0.042 13.9 0.1 0.087 12.9 0.1 1.4 1 0 0 1 1 1 0 TRADD, N-terminal domain Ras PF00071.22 gi|73671114|ref|YP_307129.1| - 0.12 11.9 0.0 0.24 11.0 0.0 1.4 1 0 0 1 1 1 0 Ras family PQQ_3 PF13570.6 gi|73671114|ref|YP_307129.1| - 0.41 11.2 1.7 50 4.6 0.0 3.3 3 0 0 3 3 3 0 PQQ-like domain Ribosomal_S7 PF00177.21 gi|73671115|ref|YP_307130.1| - 7.5e-37 126.3 5.3 9e-37 126.0 5.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e FDF PF09532.10 gi|73671115|ref|YP_307130.1| - 1.2 10.0 5.2 9.8 7.1 0.4 2.4 2 1 0 2 2 2 0 FDF domain Ribosom_S12_S23 PF00164.25 gi|73671116|ref|YP_307131.1| - 2.5e-45 152.7 0.2 3.2e-45 152.4 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 KH_2 PF07650.17 gi|73671117|ref|YP_307132.1| - 8.3e-20 70.4 2.5 5e-13 48.7 0.1 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.6 gi|73671117|ref|YP_307132.1| - 3.7e-15 55.8 0.6 6.8e-13 48.5 0.1 2.3 2 0 0 2 2 2 2 NusA-like KH domain KH_4 PF13083.6 gi|73671117|ref|YP_307132.1| - 3e-06 27.0 1.8 0.062 13.2 0.0 2.7 2 1 1 3 3 3 2 KH domain KH_1 PF00013.29 gi|73671117|ref|YP_307132.1| - 7.2e-06 25.7 3.8 0.052 13.4 0.2 3.0 2 1 1 3 3 3 2 KH domain Ribosomal_L7Ae PF01248.26 gi|73671118|ref|YP_307133.1| - 5.5e-16 58.1 0.3 6.6e-16 57.8 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BRCT_3 PF18428.1 gi|73671118|ref|YP_307133.1| - 0.013 15.6 0.2 0.017 15.2 0.2 1.2 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain RNA_pol_Rpb1_5 PF04998.17 gi|73671119|ref|YP_307134.1| - 5.7e-54 183.3 1.2 1.2e-53 182.2 1.2 1.5 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.12 gi|73671120|ref|YP_307135.1| - 7.1e-106 354.1 0.0 1.1e-105 353.5 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|73671120|ref|YP_307135.1| - 1.6e-71 239.9 0.1 2.5e-71 239.3 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_4 PF05000.17 gi|73671120|ref|YP_307135.1| - 1e-31 109.0 0.0 2.2e-31 108.0 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.18 gi|73671120|ref|YP_307135.1| - 3.2e-30 105.2 0.0 8.1e-30 103.8 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.17 gi|73671120|ref|YP_307135.1| - 1.7e-27 96.5 0.0 3.1e-27 95.7 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 Fer4_17 PF13534.6 gi|73671120|ref|YP_307135.1| - 8.9 6.9 10.3 0.49 11.0 0.3 3.1 3 0 0 3 3 3 0 4Fe-4S dicluster domain RNA_pol_Rpb2_6 PF00562.28 gi|73671121|ref|YP_307136.1| - 2.2e-125 418.8 0.0 2.9e-125 418.4 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 gi|73671121|ref|YP_307136.1| - 1.6e-28 98.9 0.2 4.1e-28 97.6 0.1 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 gi|73671121|ref|YP_307136.1| - 2e-23 82.5 0.6 4e-23 81.5 0.6 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|73671121|ref|YP_307136.1| - 3.9e-13 49.7 1.6 1.2e-12 48.2 1.6 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpb2_45 PF10385.9 gi|73671121|ref|YP_307136.1| - 0.014 15.6 0.8 0.057 13.7 0.2 2.4 3 0 0 3 3 3 0 RNA polymerase beta subunit external 1 domain DUF1451 PF07295.11 gi|73671121|ref|YP_307136.1| - 0.046 13.8 0.5 0.095 12.7 0.5 1.4 1 0 0 1 1 1 0 Zinc-ribbon containing domain Nudix_N_2 PF14803.6 gi|73671121|ref|YP_307136.1| - 0.11 12.4 0.5 12 5.9 0.0 2.6 2 0 0 2 2 2 0 Nudix N-terminal RNA_pol_Rpb2_1 PF04563.15 gi|73671122|ref|YP_307137.1| - 5e-53 179.6 0.1 6.6e-53 179.2 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|73671122|ref|YP_307137.1| - 2.7e-29 102.1 0.2 4.6e-29 101.4 0.2 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.16 gi|73671122|ref|YP_307137.1| - 6.8e-25 87.0 0.0 1.1e-24 86.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb5_C PF01191.19 gi|73671123|ref|YP_307138.1| - 2.4e-29 101.0 0.2 2.6e-29 100.9 0.2 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain Ribosomal_S17 PF00366.20 gi|73671123|ref|YP_307138.1| - 0.0071 16.4 0.1 0.0092 16.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S17 DJ-1_PfpI PF01965.24 gi|73671124|ref|YP_307139.1| - 4.2e-47 160.0 0.0 4.9e-47 159.8 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|73671124|ref|YP_307139.1| - 1.9e-05 24.5 0.0 2.4e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Catalase_C PF18011.1 gi|73671124|ref|YP_307139.1| - 0.0074 15.9 0.0 0.011 15.4 0.0 1.4 1 1 0 1 1 1 1 C-terminal domain found in long catalases GATase_3 PF07685.14 gi|73671124|ref|YP_307139.1| - 0.036 13.7 0.0 0.068 12.8 0.0 1.4 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 gi|73671124|ref|YP_307139.1| - 0.048 13.4 0.0 0.06 13.1 0.0 1.3 1 0 0 1 1 1 0 Peptidase C26 ThiJ_like PF17124.5 gi|73671124|ref|YP_307139.1| - 0.053 13.2 0.0 0.36 10.5 0.0 2.0 1 1 0 1 1 1 0 ThiJ/PfpI family-like GATase_5 PF13507.6 gi|73671124|ref|YP_307139.1| - 0.11 11.6 0.0 0.48 9.5 0.0 1.9 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ApbE PF02424.15 gi|73671125|ref|YP_307140.1| - 0.0017 17.9 3.3 0.003 17.1 0.3 2.2 2 1 0 2 2 2 1 ApbE family EP400_N PF15790.5 gi|73671125|ref|YP_307140.1| - 0.038 12.9 0.4 0.048 12.5 0.4 1.1 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal DUF460 PF04312.13 gi|73671126|ref|YP_307141.1| - 8.1e-47 158.5 0.1 2.5e-46 156.9 0.1 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF460) SCP-1 PF05483.12 gi|73671126|ref|YP_307141.1| - 0.00064 17.9 16.0 0.0011 17.1 16.0 1.3 1 0 0 1 1 1 1 Synaptonemal complex protein 1 (SCP-1) Bacillus_HBL PF05791.11 gi|73671126|ref|YP_307141.1| - 0.0023 17.8 3.1 0.0054 16.6 3.1 1.6 1 0 0 1 1 1 1 Bacillus haemolytic enterotoxin (HBL) acVLRF1 PF18859.1 gi|73671126|ref|YP_307141.1| - 0.0033 17.7 0.2 0.011 16.0 0.2 1.9 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor Nif11 PF07862.11 gi|73671126|ref|YP_307141.1| - 0.0045 17.3 0.0 0.44 10.9 0.0 3.5 3 0 0 3 3 3 1 Nif11 domain FAM76 PF16046.5 gi|73671126|ref|YP_307141.1| - 0.018 14.4 12.2 0.028 13.8 12.2 1.3 1 0 0 1 1 1 0 FAM76 protein Exonuc_VII_L PF02601.15 gi|73671126|ref|YP_307141.1| - 0.025 14.2 6.0 0.046 13.3 6.0 1.5 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF16 PF01519.16 gi|73671126|ref|YP_307141.1| - 0.13 12.7 14.8 0.45 11.0 3.9 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 UPF0242 PF06785.11 gi|73671126|ref|YP_307141.1| - 0.19 11.8 22.1 0.19 11.8 10.3 2.4 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus ATG16 PF08614.11 gi|73671126|ref|YP_307141.1| - 0.29 11.3 17.5 0.055 13.7 13.4 1.9 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) SlyX PF04102.12 gi|73671126|ref|YP_307141.1| - 0.7 10.5 7.9 9.2 7.0 3.5 2.9 1 1 1 2 2 2 0 SlyX Spc7 PF08317.11 gi|73671126|ref|YP_307141.1| - 0.89 8.4 21.2 3.3 6.5 20.7 2.0 1 1 0 1 1 1 0 Spc7 kinetochore protein CREPT PF16566.5 gi|73671126|ref|YP_307141.1| - 0.96 9.6 12.8 16 5.6 10.6 2.6 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour TMF_DNA_bd PF12329.8 gi|73671126|ref|YP_307141.1| - 1.1 9.2 24.1 2 8.5 9.3 2.7 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding MPS2 PF17060.5 gi|73671126|ref|YP_307141.1| - 1.3 8.3 12.1 2.1 7.5 12.1 1.3 1 0 0 1 1 1 0 Monopolar spindle protein 2 Fib_alpha PF08702.10 gi|73671126|ref|YP_307141.1| - 1.4 9.1 15.3 0.65 10.2 4.7 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 gi|73671126|ref|YP_307141.1| - 1.5 8.9 8.7 4.4 7.4 8.7 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) NPV_P10 PF05531.12 gi|73671126|ref|YP_307141.1| - 1.8 9.1 3.6 3.5 8.2 0.7 2.4 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein TMPIT PF07851.13 gi|73671126|ref|YP_307141.1| - 4.4 6.4 10.3 7.3 5.7 10.3 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF948 PF06103.11 gi|73671126|ref|YP_307141.1| - 5.1 7.4 4.7 94 3.4 3.7 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF3347 PF11827.8 gi|73671126|ref|YP_307141.1| - 6.6 6.9 10.6 14 5.8 10.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3347) DUF641 PF04859.12 gi|73671126|ref|YP_307141.1| - 8.9 6.7 16.1 2.1 8.7 6.1 2.8 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Hyphal_reg_CWP PF11765.8 gi|73671127|ref|YP_307142.1| - 0.044 12.7 0.0 0.062 12.2 0.0 1.2 1 0 0 1 1 1 0 Hyphally regulated cell wall protein N-terminal Y1_Tnp PF01797.16 gi|73671128|ref|YP_307143.1| - 2e-36 124.7 3.2 2.3e-36 124.6 3.2 1.0 1 0 0 1 1 1 1 Transposase IS200 like OrfB_IS605 PF01385.19 gi|73671129|ref|YP_307144.1| - 9.1e-26 90.4 1.9 1.6e-25 89.7 1.3 1.6 2 0 0 2 2 2 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|73671129|ref|YP_307144.1| - 1.8e-22 79.0 0.7 3.8e-22 78.0 0.7 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|73671129|ref|YP_307144.1| - 5e-21 73.9 0.2 1.1e-20 72.8 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|73671129|ref|YP_307144.1| - 0.0031 17.6 2.0 0.0045 17.1 0.6 1.9 2 0 0 2 2 2 1 Piccolo Zn-finger PCMT PF01135.19 gi|73671129|ref|YP_307144.1| - 0.14 11.8 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) zinc_ribbon_10 PF10058.9 gi|73671129|ref|YP_307144.1| - 0.38 10.5 1.9 0.88 9.3 1.9 1.6 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn_Tnp_IS1595 PF12760.7 gi|73671129|ref|YP_307144.1| - 0.39 10.7 2.0 0.72 9.9 2.0 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-UDP PF14569.6 gi|73671129|ref|YP_307144.1| - 0.64 10.2 2.4 4 7.6 2.4 2.1 1 1 0 1 1 1 0 Zinc-binding RING-finger zf-RanBP PF00641.18 gi|73671129|ref|YP_307144.1| - 1.7 8.0 6.8 9.6 5.6 0.2 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Peptidase_U32 PF01136.19 gi|73671130|ref|YP_307145.1| - 1.5e-96 322.1 0.0 8e-76 254.2 0.0 2.3 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.8 gi|73671130|ref|YP_307145.1| - 3.4e-21 75.9 0.7 9e-21 74.5 0.7 1.8 1 0 0 1 1 1 1 Collagenase GTP_EFTU_D4 PF14578.6 gi|73671130|ref|YP_307145.1| - 0.00058 19.7 0.6 0.0017 18.2 0.6 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 4 MatE PF01554.18 gi|73671132|ref|YP_307147.1| - 1.9e-38 131.6 38.6 1.2e-22 80.3 14.4 2.7 2 1 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|73671132|ref|YP_307147.1| - 1.2e-09 38.4 25.4 6.8e-09 35.9 14.8 5.0 3 2 1 5 5 5 2 Polysaccharide biosynthesis C-terminal domain Na_Ca_ex PF01699.24 gi|73671133|ref|YP_307148.1| - 1.5e-37 128.9 36.2 4.2e-19 69.0 15.0 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein PKD PF00801.20 gi|73671134|ref|YP_307149.1| - 1e-18 66.9 10.6 1.7e-11 43.8 2.6 3.5 3 0 0 3 3 3 2 PKD domain TPR_12 PF13424.6 gi|73671136|ref|YP_307151.1| - 2.3e-149 486.0 27.5 1e-22 80.2 1.1 8.0 2 1 7 9 9 9 9 Tetratricopeptide repeat TPR_10 PF13374.6 gi|73671136|ref|YP_307151.1| - 1.1e-116 378.0 0.1 9.1e-15 54.0 0.0 11.3 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_7 PF13176.6 gi|73671136|ref|YP_307151.1| - 7.3e-50 163.4 10.1 6.3e-06 25.8 0.1 10.0 10 0 0 10 10 9 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|73671136|ref|YP_307151.1| - 1.7e-48 160.5 26.4 3.1e-06 26.8 0.0 10.7 11 0 0 11 11 11 8 Tetratricopeptide repeat TPR_2 PF07719.17 gi|73671136|ref|YP_307151.1| - 8.1e-37 122.4 27.8 7.6e-05 22.5 0.1 11.5 12 0 0 12 12 11 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|73671136|ref|YP_307151.1| - 7e-35 116.3 36.9 0.00059 19.8 0.3 11.3 11 0 0 11 11 11 9 Tetratricopeptide repeat TPR_16 PF13432.6 gi|73671136|ref|YP_307151.1| - 6e-29 100.4 5.0 3.5e-07 30.7 0.2 6.6 4 3 1 5 5 5 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|73671136|ref|YP_307151.1| - 8.9e-28 96.6 6.5 1.3e-05 25.6 0.0 7.1 5 1 2 7 7 7 6 Tetratricopeptide repeat TPR_17 PF13431.6 gi|73671136|ref|YP_307151.1| - 4.4e-21 73.7 7.2 0.38 11.2 0.0 10.5 11 0 0 11 11 9 6 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|73671136|ref|YP_307151.1| - 1.1e-17 64.4 0.0 1.8e-07 30.8 0.0 3.0 1 1 1 3 3 3 2 MalT-like TPR region TPR_14 PF13428.6 gi|73671136|ref|YP_307151.1| - 2.6e-16 58.9 5.4 0.17 12.7 0.0 8.4 7 1 1 8 8 8 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|73671136|ref|YP_307151.1| - 1.1e-08 35.1 13.5 0.28 11.4 0.1 7.4 2 1 6 8 8 7 4 Anaphase-promoting complex, cyclosome, subunit 3 NB-ARC PF00931.22 gi|73671136|ref|YP_307151.1| - 3e-08 33.2 0.0 6.5e-08 32.1 0.0 1.5 1 0 0 1 1 1 1 NB-ARC domain Coatomer_E PF04733.14 gi|73671136|ref|YP_307151.1| - 3.1e-08 33.4 7.1 0.11 11.9 0.2 6.4 2 1 5 7 7 7 3 Coatomer epsilon subunit TPR_4 PF07721.14 gi|73671136|ref|YP_307151.1| - 3.2e-08 33.4 0.0 11 7.0 0.0 7.4 8 0 0 8 8 7 0 Tetratricopeptide repeat TPR_3 PF07720.12 gi|73671136|ref|YP_307151.1| - 1.4e-06 28.2 4.3 1.1 9.3 0.0 6.3 8 0 0 8 8 5 2 Tetratricopeptide repeat PPR PF01535.20 gi|73671136|ref|YP_307151.1| - 3.5e-06 26.9 1.0 14 6.2 0.0 7.5 9 0 0 9 9 6 0 PPR repeat SRP68 PF16969.5 gi|73671136|ref|YP_307151.1| - 1.6e-05 24.1 13.0 0.57 9.1 0.3 7.5 4 3 5 9 9 9 1 RNA-binding signal recognition particle 68 TPR_11 PF13414.6 gi|73671136|ref|YP_307151.1| - 3e-05 23.6 21.9 0.027 14.2 0.1 8.3 9 0 0 9 9 8 1 TPR repeat Wzy_C_2 PF11846.8 gi|73671136|ref|YP_307151.1| - 7.8e-05 22.7 1.2 10 6.0 0.0 6.4 7 1 1 8 8 7 0 Virulence factor membrane-bound polymerase, C-terminal Tcf25 PF04910.14 gi|73671136|ref|YP_307151.1| - 0.00011 21.4 0.1 1.7 7.6 0.0 4.5 3 1 2 5 5 5 1 Transcriptional repressor TCF25 AAA_22 PF13401.6 gi|73671136|ref|YP_307151.1| - 0.00021 21.5 0.0 0.00079 19.7 0.0 1.9 1 0 0 1 1 1 1 AAA domain SHNi-TPR PF10516.9 gi|73671136|ref|YP_307151.1| - 0.00077 18.9 5.3 2.1 7.8 0.2 5.0 5 0 0 5 5 5 1 SHNi-TPR DUF2225 PF09986.9 gi|73671136|ref|YP_307151.1| - 0.0015 18.3 1.2 2.4 7.8 0.0 3.6 1 1 1 3 3 3 1 Uncharacterized protein conserved in bacteria (DUF2225) TPR_9 PF13371.6 gi|73671136|ref|YP_307151.1| - 0.0041 17.2 0.1 67 3.7 0.0 4.7 4 0 0 4 4 4 0 Tetratricopeptide repeat AAA_16 PF13191.6 gi|73671136|ref|YP_307151.1| - 0.0061 17.0 0.0 0.022 15.2 0.0 2.0 1 0 0 1 1 1 1 AAA ATPase domain YfdX PF10938.8 gi|73671136|ref|YP_307151.1| - 0.0069 16.3 1.6 31 4.5 0.0 5.5 5 1 0 5 5 5 0 YfdX protein DUF1897 PF09005.10 gi|73671136|ref|YP_307151.1| - 0.0087 15.5 5.7 24 4.5 0.0 5.9 7 0 0 7 7 7 0 Domain of unknown function (DUF1897) Bombinin PF05298.11 gi|73671136|ref|YP_307151.1| - 0.016 14.9 0.1 1.6 8.4 0.1 3.2 2 1 1 3 3 3 0 Bombinin RPN6_N PF18055.1 gi|73671136|ref|YP_307151.1| - 0.027 14.8 4.2 17 5.8 0.7 4.6 3 1 2 5 5 4 0 26S proteasome regulatory subunit RPN6 N-terminal domain SpoIISA_toxin PF14171.6 gi|73671136|ref|YP_307151.1| - 0.031 14.0 3.4 0.54 9.9 0.4 2.4 2 0 0 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system TPR_5 PF12688.7 gi|73671136|ref|YP_307151.1| - 0.036 14.3 1.3 7.2 6.9 0.0 3.9 3 1 1 4 4 3 0 Tetratrico peptide repeat Enkurin PF13864.6 gi|73671136|ref|YP_307151.1| - 0.044 14.2 0.9 0.44 11.0 0.2 2.7 2 0 0 2 2 2 0 Calmodulin-binding TPR_6 PF13174.6 gi|73671136|ref|YP_307151.1| - 0.059 14.0 17.5 14 6.5 0.0 7.4 10 0 0 10 10 4 0 Tetratricopeptide repeat DUF627 PF04781.12 gi|73671136|ref|YP_307151.1| - 0.3 11.1 1.3 36 4.4 0.1 4.1 3 2 0 3 3 3 0 Protein of unknown function (DUF627) DivIC PF04977.15 gi|73671136|ref|YP_307151.1| - 0.35 10.7 2.4 21 4.9 1.0 2.5 2 0 0 2 2 2 0 Septum formation initiator Streptin-Immun PF11083.8 gi|73671136|ref|YP_307151.1| - 1.6 9.1 5.5 3.3 8.2 0.4 2.9 2 0 0 2 2 2 0 Lantibiotic streptin immunity protein HTH_1 PF00126.27 gi|73671137|ref|YP_307152.1| - 0.064 13.2 0.0 0.21 11.5 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family T2SSE PF00437.20 gi|73671138|ref|YP_307153.1| - 4.6e-32 111.2 0.0 7.9e-32 110.4 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_7 PF12775.7 gi|73671138|ref|YP_307153.1| - 0.0025 17.3 0.0 0.0048 16.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 gi|73671138|ref|YP_307153.1| - 0.0081 16.6 0.0 0.023 15.1 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|73671138|ref|YP_307153.1| - 0.042 13.1 0.0 0.12 11.6 0.0 1.8 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 gi|73671138|ref|YP_307153.1| - 0.057 13.7 0.0 0.29 11.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|73671138|ref|YP_307153.1| - 0.061 12.9 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 gi|73671138|ref|YP_307153.1| - 0.085 12.2 0.8 0.17 11.2 0.0 1.8 2 0 0 2 2 2 0 KaiC ABC_tran PF00005.27 gi|73671138|ref|YP_307153.1| - 0.098 13.2 0.0 0.24 11.9 0.0 1.6 1 0 0 1 1 1 0 ABC transporter DEAD PF00270.29 gi|73671138|ref|YP_307153.1| - 0.1 12.3 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 DEAD/DEAH box helicase DUF4115 PF13464.6 gi|73671138|ref|YP_307153.1| - 0.11 12.7 0.1 0.28 11.4 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4115) MarC PF01914.17 gi|73671139|ref|YP_307154.1| - 7.3e-60 201.8 17.7 8.2e-60 201.7 17.7 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein LysE PF01810.18 gi|73671139|ref|YP_307154.1| - 0.00016 21.2 7.8 0.00026 20.5 7.7 1.5 1 1 0 1 1 1 1 LysE type translocator TerC PF03741.16 gi|73671139|ref|YP_307154.1| - 0.00031 20.5 14.4 0.0022 17.7 13.9 2.1 1 1 0 1 1 1 1 Integral membrane protein TerC family Pyrophosphatase PF00719.19 gi|73671140|ref|YP_307155.1| - 3.3e-51 173.3 0.1 3.7e-51 173.1 0.1 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase DUF190 PF02641.15 gi|73671141|ref|YP_307156.1| - 3.9e-38 129.7 0.2 4.6e-38 129.5 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1993 CRCB PF02537.15 gi|73671142|ref|YP_307157.1| - 1e-20 73.8 9.3 1.3e-20 73.5 9.3 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) DUF2117 PF09890.9 gi|73671143|ref|YP_307158.1| - 5.8e-70 235.1 0.0 7.9e-70 234.6 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) NAD_kinase PF01513.21 gi|73671143|ref|YP_307158.1| - 0.031 13.5 0.1 0.047 12.9 0.1 1.2 1 0 0 1 1 1 0 ATP-NAD kinase Lactamase_B_3 PF13483.6 gi|73671144|ref|YP_307159.1| - 2.5e-27 95.8 0.0 3.3e-27 95.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|73671144|ref|YP_307159.1| - 1.9e-20 73.2 0.0 2.6e-20 72.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|73671144|ref|YP_307159.1| - 3.8e-07 30.3 0.8 5.5e-07 29.8 0.8 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Prismane PF03063.20 gi|73671145|ref|YP_307160.1| - 2.6e-127 425.6 0.0 3e-127 425.4 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Lar_N PF09861.9 gi|73671146|ref|YP_307161.1| - 1.5e-67 226.7 0.0 2.6e-67 225.9 0.0 1.3 1 0 0 1 1 1 1 Lactate racemase N-terminal domain DUF362 PF04015.12 gi|73671146|ref|YP_307161.1| - 0.00019 21.8 0.0 0.00028 21.2 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Lar_N PF09861.9 gi|73671147|ref|YP_307162.1| - 8.3e-70 234.1 0.0 1.4e-69 233.4 0.0 1.3 1 0 0 1 1 1 1 Lactate racemase N-terminal domain DUF362 PF04015.12 gi|73671147|ref|YP_307162.1| - 4.4e-05 23.8 0.0 8.4e-05 22.9 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Lar_N PF09861.9 gi|73671148|ref|YP_307163.1| - 3.2e-70 235.5 0.1 4.7e-70 234.9 0.1 1.2 1 0 0 1 1 1 1 Lactate racemase N-terminal domain DUF362 PF04015.12 gi|73671148|ref|YP_307163.1| - 0.00081 19.7 0.1 0.0013 19.1 0.1 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Methyltransf_2 PF00891.18 gi|73671148|ref|YP_307163.1| - 0.096 12.0 0.1 0.2 10.9 0.1 1.5 1 0 0 1 1 1 0 O-methyltransferase domain SSF PF00474.17 gi|73671149|ref|YP_307164.1| - 2.1e-56 191.6 43.4 2.9e-56 191.1 43.4 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family LPD14 PF18827.1 gi|73671149|ref|YP_307164.1| - 0.49 10.7 2.0 0.68 10.2 0.2 2.1 2 0 0 2 2 2 0 Large polyvalent protein-associated domain 14 DUF4516 PF14990.6 gi|73671150|ref|YP_307165.1| - 0.54 10.0 2.0 0.83 9.4 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) DUF2683 PF10884.8 gi|73671151|ref|YP_307166.1| - 6.7e-29 100.0 4.1 7.6e-29 99.8 4.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) Disaggr_assoc PF08480.10 gi|73671152|ref|YP_307167.1| - 1.8e-25 89.9 13.5 1.8e-25 89.9 13.5 3.4 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|73671152|ref|YP_307167.1| - 5.3e-20 71.9 42.0 8.3e-17 61.5 18.5 2.5 1 1 1 2 2 2 2 Right handed beta helix region Pectate_lyase_3 PF12708.7 gi|73671152|ref|YP_307167.1| - 3.6e-09 36.8 4.0 3.6e-09 36.8 4.0 3.2 1 1 2 3 3 3 2 Pectate lyase superfamily protein SHOCT PF09851.9 gi|73671153|ref|YP_307168.1| - 2.3e-10 39.9 1.1 3e-10 39.5 1.1 1.2 1 0 0 1 1 1 1 Short C-terminal domain VbhA PF18495.1 gi|73671153|ref|YP_307168.1| - 0.011 15.6 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Antitoxin VbhA YppF PF14178.6 gi|73671153|ref|YP_307168.1| - 0.084 12.8 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 YppF-like protein Styelin PF17562.2 gi|73671153|ref|YP_307168.1| - 0.12 12.8 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 Styelin ATP1G1_PLM_MAT8 PF02038.16 gi|73671153|ref|YP_307168.1| - 0.61 9.6 3.1 0.89 9.0 3.1 1.2 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family Acetyltransf_1 PF00583.25 gi|73671154|ref|YP_307169.1| - 2.9e-13 50.1 0.0 4.4e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|73671154|ref|YP_307169.1| - 3.1e-09 37.1 0.0 5.1e-09 36.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|73671154|ref|YP_307169.1| - 5.3e-09 36.2 0.0 9.6e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|73671154|ref|YP_307169.1| - 3.5e-05 23.7 0.0 7.2e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|73671154|ref|YP_307169.1| - 0.0019 18.3 0.0 0.0058 16.7 0.0 1.7 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Bac_rhamnosid_N PF08531.10 gi|73671154|ref|YP_307169.1| - 0.027 14.3 0.0 0.044 13.6 0.0 1.4 1 0 0 1 1 1 0 Alpha-L-rhamnosidase N-terminal domain MOZ_SAS PF01853.18 gi|73671154|ref|YP_307169.1| - 0.039 13.6 0.0 0.059 13.0 0.0 1.3 1 0 0 1 1 1 0 MOZ/SAS family SGL PF08450.12 gi|73671155|ref|YP_307170.1| - 0.00054 19.6 0.3 0.27 10.8 0.1 2.4 2 0 0 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region Kelch_3 PF13415.6 gi|73671155|ref|YP_307170.1| - 0.0021 18.3 3.2 56 4.2 0.0 5.1 6 0 0 6 6 6 0 Galactose oxidase, central domain PD40 PF07676.12 gi|73671155|ref|YP_307170.1| - 0.0042 17.0 0.1 0.16 12.0 0.0 3.5 2 1 0 2 2 2 1 WD40-like Beta Propeller Repeat TRSP PF12500.8 gi|73671155|ref|YP_307170.1| - 0.089 12.7 1.7 1.6 8.6 0.7 2.7 1 1 0 2 2 2 0 TRSP domain C terminus to PRTase_2 LolA_like PF17131.4 gi|73671155|ref|YP_307170.1| - 0.37 10.5 3.8 3.2 7.4 2.1 2.7 2 1 0 2 2 2 0 Outer membrane lipoprotein-sorting protein Microcin PF03526.13 gi|73671156|ref|YP_307171.1| - 0.12 12.2 1.6 0.88 9.4 0.0 2.2 2 0 0 2 2 2 0 Colicin E1 (microcin) immunity protein PorA PF11271.8 gi|73671156|ref|YP_307171.1| - 0.26 10.6 0.1 0.5 9.6 0.0 1.5 2 0 0 2 2 2 0 Porin PorA S_4TM PF18159.1 gi|73671156|ref|YP_307171.1| - 2.2 7.5 6.1 1.4 8.1 0.1 2.1 1 1 1 2 2 2 0 SMODS-associating 4TM effector domain Pentapeptide_4 PF13599.6 gi|73671157|ref|YP_307172.1| - 5.5e-21 74.5 25.4 2.3e-10 40.5 11.7 3.2 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|73671157|ref|YP_307172.1| - 8.9e-17 61.0 11.8 9.3e-08 32.1 6.3 3.4 3 0 0 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide PF00805.22 gi|73671157|ref|YP_307172.1| - 2.5e-15 55.7 10.8 1.4e-05 24.7 5.5 4.4 2 2 2 4 4 4 4 Pentapeptide repeats (8 copies) Beta_helix PF13229.6 gi|73671157|ref|YP_307172.1| - 0.019 14.8 1.6 0.069 13.0 1.5 2.0 1 1 0 1 1 1 0 Right handed beta helix region Lip_prot_lig_C PF10437.9 gi|73671157|ref|YP_307172.1| - 0.071 13.1 1.3 0.38 10.8 0.2 2.3 2 1 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus DUF5537 PF17690.1 gi|73671157|ref|YP_307172.1| - 0.15 11.7 1.1 1.6 8.4 0.0 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5537) Hexapep PF00132.24 gi|73671158|ref|YP_307173.1| - 5.3e-12 45.0 17.6 7.5e-10 38.2 11.4 3.1 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Mac PF12464.8 gi|73671158|ref|YP_307173.1| - 8.1e-08 32.4 0.0 1.3e-07 31.7 0.0 1.4 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep_2 PF14602.6 gi|73671158|ref|YP_307173.1| - 4.2e-07 29.6 12.0 2e-05 24.3 8.6 2.6 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase CobN-Mg_chel PF02514.16 gi|73671159|ref|YP_307174.1| - 0 1128.4 0.1 0 1128.0 0.1 1.1 1 0 0 1 1 1 1 CobN/Magnesium Chelatase CarboxypepD_reg PF13620.6 gi|73671159|ref|YP_307174.1| - 3.7e-05 23.9 0.0 0.00012 22.3 0.0 1.8 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|73671159|ref|YP_307174.1| - 0.0011 19.0 0.1 0.004 17.1 0.1 2.0 1 0 0 1 1 1 1 CarboxypepD_reg-like domain SdrD_B PF17210.3 gi|73671159|ref|YP_307174.1| - 0.03 14.6 3.0 0.03 14.5 0.0 2.5 2 0 0 2 2 2 0 SdrD B-like domain PQQ_2 PF13360.6 gi|73671160|ref|YP_307175.1| - 1.8e-62 211.1 16.4 3.2e-13 49.8 0.0 8.0 2 2 5 7 7 7 7 PQQ-like domain PQQ_3 PF13570.6 gi|73671160|ref|YP_307175.1| - 4.1e-62 205.2 63.6 6.2e-06 26.5 0.2 16.4 16 0 0 16 16 16 15 PQQ-like domain PQQ PF01011.21 gi|73671160|ref|YP_307175.1| - 1.8e-45 150.8 37.3 7.9e-05 22.4 0.3 14.9 15 0 0 15 15 15 11 PQQ enzyme repeat CARDB PF07705.11 gi|73671160|ref|YP_307175.1| - 2.2e-30 104.9 19.9 4.4e-16 59.0 3.8 3.3 3 0 0 3 3 3 2 CARDB Y_Y_Y PF07495.13 gi|73671160|ref|YP_307175.1| - 5.4e-05 23.1 0.9 0.048 13.6 0.1 3.6 3 0 0 3 3 3 2 Y_Y_Y domain Nup160 PF11715.8 gi|73671160|ref|YP_307175.1| - 0.016 13.9 0.2 0.048 12.3 0.1 1.8 2 0 0 2 2 2 0 Nucleoporin Nup120/160 Y1_Tnp PF01797.16 gi|73671161|ref|YP_307176.1| - 9.8e-32 109.6 0.0 1.2e-31 109.3 0.0 1.1 1 0 0 1 1 1 1 Transposase IS200 like Lipid_DES PF08557.10 gi|73671161|ref|YP_307176.1| - 0.1 12.1 0.0 0.26 10.8 0.0 1.8 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) PQQ_2 PF13360.6 gi|73671162|ref|YP_307177.1| - 3.4e-27 95.6 0.8 2.7e-17 63.1 0.1 3.0 2 1 1 3 3 3 2 PQQ-like domain PQQ_3 PF13570.6 gi|73671162|ref|YP_307177.1| - 2.3e-14 53.4 38.8 0.00076 19.9 0.6 8.3 8 0 0 8 8 8 5 PQQ-like domain PQQ PF01011.21 gi|73671162|ref|YP_307177.1| - 6.6e-11 41.6 22.0 0.0062 16.4 0.2 5.9 6 0 0 6 6 6 4 PQQ enzyme repeat Phage_holin_T PF11031.8 gi|73671162|ref|YP_307177.1| - 0.4 10.1 3.2 0.73 9.3 3.2 1.4 1 0 0 1 1 1 0 Bacteriophage T holin PKD PF00801.20 gi|73671163|ref|YP_307178.1| - 1.5e-72 239.4 63.1 2.7e-13 49.5 0.8 7.4 8 0 0 8 8 8 6 PKD domain NosD PF05048.13 gi|73671163|ref|YP_307178.1| - 3.9e-19 68.9 34.1 3.9e-19 68.9 34.1 3.4 2 1 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD_3 PF16820.5 gi|73671163|ref|YP_307178.1| - 8e-10 38.3 17.7 0.0051 16.5 0.5 6.5 6 0 0 6 6 6 3 PKD-like domain MG2 PF01835.19 gi|73671163|ref|YP_307178.1| - 1.8e-09 37.9 18.0 0.3 11.6 0.1 6.4 2 1 4 6 6 6 4 MG2 domain DUF4625 PF15418.6 gi|73671163|ref|YP_307178.1| - 0.0073 16.5 12.4 4 7.7 0.0 7.2 7 1 1 8 8 8 1 Domain of unknown function (DUF4625) LPD25 PF18840.1 gi|73671163|ref|YP_307178.1| - 0.028 15.0 0.0 17 6.0 0.0 3.1 1 1 1 2 2 2 0 Large polyvalent protein associated domain 25 DUF2381 PF09544.10 gi|73671163|ref|YP_307178.1| - 0.09 12.3 5.2 13 5.2 0.0 4.4 5 0 0 5 5 5 0 Protein of unknown function (DUF2381) TSP_3 PF02412.18 gi|73671163|ref|YP_307178.1| - 0.94 9.2 8.8 4 7.2 1.3 2.9 2 0 0 2 2 2 0 Thrombospondin type 3 repeat NPCBM_assoc PF10633.9 gi|73671163|ref|YP_307178.1| - 1.4 9.2 12.7 0.6 10.4 1.7 5.5 5 1 1 6 6 6 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF3324 PF11797.8 gi|73671163|ref|YP_307178.1| - 5.8 6.9 24.2 6.8 6.7 0.2 6.6 7 1 0 7 7 7 0 Protein of unknown function C-terminal (DUF3324) PKD PF00801.20 gi|73671164|ref|YP_307179.1| - 3.6e-112 366.3 88.0 2.3e-13 49.7 5.2 9.9 9 0 0 9 9 9 9 PKD domain PQQ_3 PF13570.6 gi|73671164|ref|YP_307179.1| - 9.9e-67 219.9 36.1 2.3e-10 40.6 0.2 10.1 10 0 0 10 10 10 8 PQQ-like domain PQQ PF01011.21 gi|73671164|ref|YP_307179.1| - 1.2e-44 148.2 41.0 1.1e-08 34.6 0.2 9.7 11 0 0 11 11 10 7 PQQ enzyme repeat NosD PF05048.13 gi|73671164|ref|YP_307179.1| - 1.7e-19 70.1 23.3 1.7e-19 70.1 23.3 3.5 4 0 0 4 4 3 1 Periplasmic copper-binding protein (NosD) PKD_3 PF16820.5 gi|73671164|ref|YP_307179.1| - 4.4e-14 52.0 30.1 0.023 14.4 0.4 9.5 9 0 0 9 9 9 4 PKD-like domain MG2 PF01835.19 gi|73671164|ref|YP_307179.1| - 2e-09 37.8 32.0 0.24 11.9 0.1 9.5 5 1 5 10 10 10 5 MG2 domain DUF2381 PF09544.10 gi|73671164|ref|YP_307179.1| - 0.0013 18.3 6.7 24 4.3 0.0 6.1 6 1 1 7 7 7 0 Protein of unknown function (DUF2381) LPD25 PF18840.1 gi|73671164|ref|YP_307179.1| - 0.0051 17.3 0.0 50 4.5 0.0 4.5 3 0 0 3 3 3 0 Large polyvalent protein associated domain 25 DUF3324 PF11797.8 gi|73671164|ref|YP_307179.1| - 0.022 14.7 27.6 6.7 6.7 0.2 8.3 9 0 0 9 9 9 0 Protein of unknown function C-terminal (DUF3324) DUF3881 PF12997.7 gi|73671164|ref|YP_307179.1| - 0.032 13.5 1.0 2.9 7.1 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function, E. rectale Gene description (DUF3881) TraI_2B PF18340.1 gi|73671164|ref|YP_307179.1| - 0.047 13.8 0.9 3.6 7.7 0.0 4.1 5 0 0 5 5 4 0 DNA relaxase TraI 2B/2B-like domain Kelch_6 PF13964.6 gi|73671164|ref|YP_307179.1| - 0.31 11.4 12.1 3.4 8.1 0.1 6.6 6 0 0 6 6 6 0 Kelch motif DUF5122 PF17164.4 gi|73671164|ref|YP_307179.1| - 0.42 10.9 31.8 8.6 6.8 0.2 8.4 8 0 0 8 8 8 0 Domain of unknown function (DUF5122) beta-propeller YfhE PF14152.6 gi|73671164|ref|YP_307179.1| - 1.8 8.7 8.1 1.1e+02 2.9 0.1 4.4 4 0 0 4 4 4 0 YfhE-like protein SoxZ PF08770.11 gi|73671164|ref|YP_307179.1| - 3.7 7.4 12.6 15 5.4 0.2 5.4 5 0 0 5 5 5 0 Sulphur oxidation protein SoxZ Dockerin_1 PF00404.18 gi|73671164|ref|YP_307179.1| - 6.2 7.1 10.8 59 4.0 0.1 3.9 3 0 0 3 3 3 0 Dockerin type I domain DUF1727 PF08353.10 gi|73671164|ref|YP_307179.1| - 7.5 6.5 13.1 11 6.0 0.0 4.9 6 2 2 8 8 6 0 Domain of unknown function (DUF1727) PKD PF00801.20 gi|73671165|ref|YP_307180.1| - 4.8e-70 231.4 35.8 3.5e-15 55.6 3.8 5.7 5 0 0 5 5 5 5 PKD domain MG2 PF01835.19 gi|73671165|ref|YP_307180.1| - 1.1e-10 41.8 16.4 0.51 10.8 0.2 6.1 4 1 2 6 6 6 5 MG2 domain PKD_3 PF16820.5 gi|73671165|ref|YP_307180.1| - 5.7e-06 26.0 10.9 0.84 9.4 0.2 5.7 5 0 0 5 5 5 3 PKD-like domain DUF2381 PF09544.10 gi|73671165|ref|YP_307180.1| - 0.0028 17.2 1.8 11 5.5 0.0 4.0 4 0 0 4 4 4 2 Protein of unknown function (DUF2381) Big_4 PF07532.11 gi|73671165|ref|YP_307180.1| - 0.0031 17.2 22.7 0.55 10.0 0.2 7.2 6 1 0 6 6 6 3 Bacterial Ig-like domain (group 4) Phage_Gp19 PF09355.10 gi|73671165|ref|YP_307180.1| - 0.0061 17.0 3.8 15 6.0 0.0 4.2 4 0 0 4 4 4 0 Phage protein Gp19/Gp15/Gp42 DUF3324 PF11797.8 gi|73671165|ref|YP_307180.1| - 0.0096 15.9 13.1 2.6 8.0 0.2 5.4 5 1 0 5 5 5 2 Protein of unknown function C-terminal (DUF3324) LPD25 PF18840.1 gi|73671165|ref|YP_307180.1| - 0.026 15.0 0.0 28 5.3 0.0 3.6 2 1 0 3 3 3 0 Large polyvalent protein associated domain 25 Tudor_3 PF18115.1 gi|73671165|ref|YP_307180.1| - 0.088 12.7 3.7 1.1e+02 2.7 0.1 4.8 6 0 0 6 6 5 0 DNA repair protein Crb2 Tudor domain DUF4625 PF15418.6 gi|73671165|ref|YP_307180.1| - 0.34 11.2 8.0 17 5.7 0.0 5.5 6 0 0 6 6 6 0 Domain of unknown function (DUF4625) NPCBM_assoc PF10633.9 gi|73671165|ref|YP_307180.1| - 0.93 9.8 14.0 5.8 7.2 1.2 5.7 5 1 0 6 6 5 0 NPCBM-associated, NEW3 domain of alpha-galactosidase GbpA_2 PF18416.1 gi|73671165|ref|YP_307180.1| - 1.3 9.3 6.3 97 3.3 0.0 5.4 5 2 1 6 6 6 0 N-acetylglucosamine binding protein domain 2 SoxZ PF08770.11 gi|73671165|ref|YP_307180.1| - 2 8.2 9.5 6.5 6.6 0.1 4.3 5 0 0 5 5 5 0 Sulphur oxidation protein SoxZ DUF1232 PF06803.12 gi|73671166|ref|YP_307181.1| - 1.8e-13 50.0 9.7 2.7e-13 49.5 9.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) IFT46_B_C PF12317.8 gi|73671166|ref|YP_307181.1| - 0.4 10.4 2.0 0.52 10.0 1.0 1.6 1 1 1 2 2 2 0 Intraflagellar transport complex B protein 46 C terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_barkeri_Fusaro_uid57715/all.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_barkeri_Fusaro_uid57715/all.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_barkeri_Fusaro_uid57715/all.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_barkeri_Fusaro_uid57715/all.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 16:15:26 2019 # [ok]