#Protein	Length	Domain	Domain_description	score	bias	c-Evalue	i-Evalue	hmmfrom	hmmto	alifrom	alito	envfrom 	envto	acc
gi|330506034|ref|YP_004399692.1|	657	VirE	Virulence-associated	14.0	0.1	5.4e-06	0.032	109	172	410	473	403	486	0.90
gi|330506034|ref|YP_004399692.1|	657	DUF4872	Domain	10.8	0.0	5e-05	0.3	104	168	50	112	48	117	0.89
gi|330506034|ref|YP_004399692.1|	657	DUF4872	Domain	-1.9	0.0	0.4	2.4e+03	54	96	541	582	527	584	0.74
gi|330506034|ref|YP_004399692.1|	657	QRPTase_N	Quinolinate	11.2	0.0	4.9e-05	0.29	50	84	83	117	58	120	0.84
gi|330506035|ref|YP_004399693.1|	216	DUF3223	Protein	56.7	0.0	1.8e-19	3.2e-15	1	74	36	108	36	109	0.90
gi|330506035|ref|YP_004399693.1|	216	DUF3223	Protein	-1.8	0.1	0.32	5.8e+03	20	32	199	210	182	214	0.54
gi|330506036|ref|YP_004399694.1|	92	PG_binding_2	Putative	17.9	0.0	4.6e-07	0.0028	9	42	20	53	13	58	0.89
gi|330506036|ref|YP_004399694.1|	92	Recombinase	Recombinase	15.5	0.0	2.8e-06	0.017	9	57	18	66	11	86	0.86
gi|330506036|ref|YP_004399694.1|	92	TCP	TCP	13.9	0.0	1e-05	0.06	26	64	27	65	21	89	0.72
gi|330506037|ref|YP_004399695.1|	745	ATP-synt_DE	ATP	12.5	4.5	1.5e-05	0.13	7	41	363	396	347	400	0.88
gi|330506037|ref|YP_004399695.1|	745	SesA	N-terminal	9.3	0.5	0.00014	1.2	23	70	349	396	340	406	0.88
gi|330506037|ref|YP_004399695.1|	745	SesA	N-terminal	0.3	0.0	0.087	7.8e+02	99	116	553	570	533	573	0.80
gi|330506038|ref|YP_004399696.1|	165	Golgin_A5	Golgin	21.6	6.2	2.1e-07	0.00012	44	131	40	123	20	154	0.86
gi|330506038|ref|YP_004399696.1|	165	DUF3450	Protein	18.6	7.7	1.5e-06	0.00089	15	126	42	156	29	158	0.91
gi|330506038|ref|YP_004399696.1|	165	Phage_HK97_TLTM	Tail	18.1	3.4	2e-06	0.0012	42	122	51	139	46	159	0.80
gi|330506038|ref|YP_004399696.1|	165	CENP-F_leu_zip	Leucine-rich	16.4	7.3	1.2e-05	0.0072	37	93	42	98	26	107	0.77
gi|330506038|ref|YP_004399696.1|	165	CENP-F_leu_zip	Leucine-rich	3.0	0.3	0.16	94	13	41	95	123	92	156	0.49
gi|330506038|ref|YP_004399696.1|	165	zf-C4H2	Zinc	16.6	3.7	1.2e-05	0.0074	57	128	38	113	12	158	0.72
gi|330506038|ref|YP_004399696.1|	165	TMF_TATA_bd	TATA	5.7	3.1	0.029	17	28	78	38	85	24	89	0.73
gi|330506038|ref|YP_004399696.1|	165	TMF_TATA_bd	TATA	14.9	1.8	3.9e-05	0.023	15	83	74	146	71	157	0.80
gi|330506038|ref|YP_004399696.1|	165	Fez1	Fez1	15.6	6.1	2.8e-05	0.017	43	143	41	142	19	161	0.55
gi|330506038|ref|YP_004399696.1|	165	DUF4618	Domain	12.4	3.8	0.00013	0.079	158	228	22	92	4	94	0.86
gi|330506038|ref|YP_004399696.1|	165	DUF4618	Domain	4.0	0.1	0.048	29	66	109	88	134	85	138	0.79
gi|330506038|ref|YP_004399696.1|	165	DUF4200	Domain	13.6	9.1	0.00012	0.069	31	104	26	95	13	98	0.82
gi|330506038|ref|YP_004399696.1|	165	DUF4200	Domain	7.6	3.4	0.0079	4.7	42	97	68	123	68	144	0.85
gi|330506038|ref|YP_004399696.1|	165	HALZ	Homeobox	14.1	1.4	6.7e-05	0.04	2	29	75	102	67	116	0.56
gi|330506038|ref|YP_004399696.1|	165	DUF724	Protein	13.2	4.2	9.6e-05	0.057	102	174	43	122	17	135	0.74
gi|330506038|ref|YP_004399696.1|	165	Seryl_tRNA_N	Seryl-tRNA	10.7	8.0	0.0008	0.48	29	98	43	109	12	115	0.81
gi|330506038|ref|YP_004399696.1|	165	Seryl_tRNA_N	Seryl-tRNA	11.4	8.0	0.00047	0.28	12	96	47	128	42	143	0.70
gi|330506038|ref|YP_004399696.1|	165	AKNA	AT-hook-containing	13.5	2.4	0.00015	0.088	35	81	60	114	42	128	0.78
gi|330506038|ref|YP_004399696.1|	165	APG6_N	Apg6	12.7	13.5	0.00023	0.14	15	95	42	119	28	143	0.66
gi|330506038|ref|YP_004399696.1|	165	RHH_1	Ribbon-helix-helix	12.7	0.2	0.00015	0.091	4	37	5	38	2	39	0.91
gi|330506038|ref|YP_004399696.1|	165	RHH_1	Ribbon-helix-helix	0.9	0.4	0.84	5e+02	13	28	44	59	43	59	0.88
gi|330506038|ref|YP_004399696.1|	165	RHH_1	Ribbon-helix-helix	-1.8	0.1	5.6	3.3e+03	15	27	88	100	88	100	0.85
gi|330506038|ref|YP_004399696.1|	165	Phage_GPO	Phage	12.0	3.1	0.0002	0.12	193	263	39	110	8	121	0.80
gi|330506038|ref|YP_004399696.1|	165	HIP1_clath_bdg	Clathrin-binding	12.2	8.3	0.00035	0.21	34	95	50	114	21	122	0.78
gi|330506038|ref|YP_004399696.1|	165	Spc7	Spc7	10.0	10.2	0.00047	0.28	175	279	41	140	10	147	0.41
gi|330506038|ref|YP_004399696.1|	165	SurA_N_3	SurA	11.6	0.7	0.00029	0.18	77	121	9	53	4	65	0.86
gi|330506038|ref|YP_004399696.1|	165	SurA_N_3	SurA	-0.4	0.2	1.4	8.5e+02	57	68	82	93	56	112	0.50
gi|330506038|ref|YP_004399696.1|	165	CorA	CorA-like	9.3	10.3	0.001	0.62	106	224	24	138	9	145	0.76
gi|330506038|ref|YP_004399696.1|	165	DUF1664	Protein	5.3	1.5	0.032	19	57	106	38	90	24	95	0.66
gi|330506038|ref|YP_004399696.1|	165	DUF1664	Protein	7.2	0.1	0.0083	4.9	49	102	89	142	81	146	0.73
gi|330506038|ref|YP_004399696.1|	165	DUF4407	Domain	9.5	6.5	0.00096	0.57	107	248	44	116	13	158	0.42
gi|330506038|ref|YP_004399696.1|	165	Fungal_TACC	Fungal	9.2	5.0	0.0028	1.7	34	70	67	103	25	108	0.92
gi|330506038|ref|YP_004399696.1|	165	UPF0449	Uncharacterised	5.9	4.2	0.03	18	42	90	45	92	4	97	0.64
gi|330506038|ref|YP_004399696.1|	165	UPF0449	Uncharacterised	6.3	0.1	0.022	13	56	97	97	138	92	144	0.79
gi|330506038|ref|YP_004399696.1|	165	YabA	Initiation	9.2	4.4	0.0031	1.8	13	66	55	108	40	157	0.78
gi|330506038|ref|YP_004399696.1|	165	FapA	Flagellar	6.6	7.1	0.0043	2.5	350	415	39	101	10	136	0.57
gi|330506038|ref|YP_004399696.1|	165	Atg14	Vacuolar	7.3	11.5	0.0035	2.1	42	122	42	119	17	157	0.63
gi|330506038|ref|YP_004399696.1|	165	Cep57_CLD_2	Centrosome	10.6	4.9	0.00076	0.45	24	67	43	86	31	87	0.87
gi|330506038|ref|YP_004399696.1|	165	Cep57_CLD_2	Centrosome	1.8	2.5	0.44	2.6e+02	7	40	89	122	83	144	0.57
gi|330506038|ref|YP_004399696.1|	165	DivIC	Septum	-0.4	0.4	1.6	9.8e+02	19	35	42	58	24	68	0.56
gi|330506038|ref|YP_004399696.1|	165	DivIC	Septum	8.6	4.5	0.0026	1.6	18	55	65	102	60	109	0.86
gi|330506038|ref|YP_004399696.1|	165	DivIC	Septum	-1.6	0.0	4	2.4e+03	22	40	125	143	115	144	0.74
gi|330506038|ref|YP_004399696.1|	165	DUF4140	N-terminal	6.2	7.3	0.024	14	57	97	52	96	15	101	0.82
gi|330506038|ref|YP_004399696.1|	165	DUF4140	N-terminal	2.0	0.1	0.48	2.9e+02	66	97	100	131	92	146	0.67
gi|330506039|ref|YP_004399697.1|	168	Mei5	Double-strand	22.0	1.3	7.5e-08	0.00012	99	203	22	136	9	137	0.82
gi|330506039|ref|YP_004399697.1|	168	RNase_H	RNase	15.1	0.0	1.2e-05	0.02	32	131	42	133	14	136	0.74
gi|330506039|ref|YP_004399697.1|	168	Bap31_Bap29_C	Bap31/Bap29	14.5	3.7	1.6e-05	0.027	2	37	43	78	42	101	0.85
gi|330506039|ref|YP_004399697.1|	168	COMP	Cartilage	14.4	0.2	2.4e-05	0.039	9	36	35	63	33	67	0.85
gi|330506039|ref|YP_004399697.1|	168	COMP	Cartilage	0.7	0.2	0.45	7.4e+02	15	23	84	92	78	96	0.71
gi|330506039|ref|YP_004399697.1|	168	TMF_TATA_bd	TATA	14.5	2.9	1.9e-05	0.032	11	66	41	96	32	116	0.77
gi|330506039|ref|YP_004399697.1|	168	CENP-H	Centromere	13.3	2.5	4.9e-05	0.08	7	86	42	126	36	130	0.72
gi|330506039|ref|YP_004399697.1|	168	DUF4140	N-terminal	12.7	0.6	7.9e-05	0.13	61	98	38	75	14	77	0.77
gi|330506039|ref|YP_004399697.1|	168	ADIP	Afadin-	12.7	5.8	6.1e-05	0.099	54	121	36	105	32	115	0.82
gi|330506039|ref|YP_004399697.1|	168	DivIC	Septum	11.4	1.9	0.00013	0.21	18	54	43	78	29	84	0.82
gi|330506039|ref|YP_004399697.1|	168	YabA	Initiation	11.1	1.7	0.00029	0.47	6	63	40	96	36	114	0.68
gi|330506039|ref|YP_004399697.1|	168	DUF4337	Domain	8.2	3.3	0.0016	2.6	68	111	33	76	13	131	0.89
gi|330506040|ref|YP_004399698.1|	103	HTH_24	Winged	31.2	0.0	8.4e-11	1.2e-07	3	48	22	67	20	75	0.97
gi|330506040|ref|YP_004399698.1|	103	TrmB	Sugar-specific	28.2	0.1	9.3e-10	1.3e-06	9	58	23	72	21	85	0.89
gi|330506040|ref|YP_004399698.1|	103	MarR	MarR	26.7	0.0	2.9e-09	4e-06	11	59	30	78	22	78	0.91
gi|330506040|ref|YP_004399698.1|	103	MarR_2	MarR	25.7	0.0	5.7e-09	7.9e-06	14	62	31	77	23	77	0.88
gi|330506040|ref|YP_004399698.1|	103	PaaX	PaaX-like	16.3	0.0	6.3e-06	0.0087	8	61	26	76	23	83	0.85
gi|330506040|ref|YP_004399698.1|	103	PadR	Transcriptional	15.1	0.0	1.2e-05	0.017	25	58	47	76	27	83	0.75
gi|330506040|ref|YP_004399698.1|	103	HTH_11	HTH	14.2	0.0	2.3e-05	0.032	8	48	30	70	25	75	0.83
gi|330506040|ref|YP_004399698.1|	103	HTH_34	Winged	14.5	0.0	2.2e-05	0.03	16	63	38	83	26	98	0.87
gi|330506040|ref|YP_004399698.1|	103	HTH_AsnC-type	AsnC-type	13.1	0.0	4.6e-05	0.064	4	42	23	61	22	61	0.86
gi|330506040|ref|YP_004399698.1|	103	HTH_IclR	IclR	13.0	0.0	4.8e-05	0.066	12	49	31	67	27	69	0.88
gi|330506040|ref|YP_004399698.1|	103	FAF	Fantastic	12.6	0.0	9.1e-05	0.13	9	43	60	92	55	94	0.85
gi|330506040|ref|YP_004399698.1|	103	IF2_N	Translation	11.9	0.0	0.00011	0.15	5	20	38	53	34	56	0.87
gi|330506040|ref|YP_004399698.1|	103	SMC_ScpB	Segregation	11.4	0.0	0.00013	0.18	110	159	52	100	48	101	0.90
gi|330506042|ref|YP_004399700.1|	131	MarR	MarR	-0.6	0.0	0.37	1.3e+03	8	31	7	30	6	36	0.81
gi|330506042|ref|YP_004399700.1|	131	MarR	MarR	3.7	0.0	0.017	60	1	22	40	61	40	67	0.91
gi|330506042|ref|YP_004399700.1|	131	MarR	MarR	12.4	0.0	3.1e-05	0.11	13	45	92	124	86	129	0.90
gi|330506042|ref|YP_004399700.1|	131	HTH_38	Helix-turn-helix	16.1	0.3	2e-06	0.0072	11	36	86	112	85	124	0.78
gi|330506042|ref|YP_004399700.1|	131	HTH_24	Winged	-2.2	0.0	0.89	3.2e+03	8	15	47	54	46	59	0.77
gi|330506042|ref|YP_004399700.1|	131	HTH_24	Winged	15.0	0.0	3.8e-06	0.014	16	45	95	124	88	124	0.88
gi|330506042|ref|YP_004399700.1|	131	MarR_2	MarR	13.8	0.0	1.1e-05	0.041	23	49	98	124	78	129	0.88
gi|330506042|ref|YP_004399700.1|	131	TrmB	Sugar-specific	11.0	0.0	8.4e-05	0.3	19	50	93	124	89	129	0.92
gi|330506043|ref|YP_004399701.1|	209	DUF892	Domain	-1.7	0.0	0.75	2.7e+03	39	56	26	43	3	46	0.68
gi|330506043|ref|YP_004399701.1|	209	DUF892	Domain	11.7	0.0	5.4e-05	0.19	32	82	58	110	52	143	0.69
gi|330506043|ref|YP_004399701.1|	209	DUF892	Domain	0.9	0.0	0.11	4.1e+02	13	45	147	180	145	184	0.80
gi|330506043|ref|YP_004399701.1|	209	Snapin_Pallidin	Snapin/Pallidin	-1.2	0.0	0.78	2.8e+03	20	39	22	41	13	44	0.66
gi|330506043|ref|YP_004399701.1|	209	Snapin_Pallidin	Snapin/Pallidin	11.4	0.3	9.1e-05	0.33	13	73	61	119	59	125	0.88
gi|330506043|ref|YP_004399701.1|	209	ABC_tran_CTD	ABC	1.5	0.0	0.099	3.5e+02	41	58	22	39	5	44	0.55
gi|330506043|ref|YP_004399701.1|	209	ABC_tran_CTD	ABC	10.1	1.0	0.0002	0.73	12	62	26	82	19	83	0.77
gi|330506043|ref|YP_004399701.1|	209	ABC_tran_CTD	ABC	1.8	0.0	0.081	2.9e+02	9	27	93	111	84	120	0.88
gi|330506043|ref|YP_004399701.1|	209	ABC_tran_CTD	ABC	-1.4	0.0	0.78	2.8e+03	18	24	166	172	161	184	0.53
gi|330506043|ref|YP_004399701.1|	209	DUF2205	Short	10.6	0.5	0.00012	0.44	29	50	77	98	58	121	0.75
gi|330506043|ref|YP_004399701.1|	209	DUF2205	Short	-3.3	0.0	2.7	9.6e+03	18	30	154	167	145	172	0.54
gi|330506043|ref|YP_004399701.1|	209	BLOC1_2	Biogenesis	1.5	0.0	0.11	3.8e+02	72	95	15	38	5	45	0.49
gi|330506043|ref|YP_004399701.1|	209	BLOC1_2	Biogenesis	8.4	0.4	0.00074	2.7	41	91	61	111	59	113	0.93
gi|330506043|ref|YP_004399701.1|	209	BLOC1_2	Biogenesis	-2.7	0.0	2.1	7.7e+03	49	64	164	179	158	180	0.70
gi|330506047|ref|YP_004399705.1|	209	VirE	Virulence-associated	15.7	0.1	5.2e-07	0.0094	112	173	107	168	98	182	0.89
gi|330506049|ref|YP_004399707.1|	160	tRNA-synt_1g	tRNA	135.3	0.0	1.8e-42	2.3e-39	62	200	2	140	1	155	0.94
gi|330506049|ref|YP_004399707.1|	160	DZR	Double	11.8	3.5	0.00015	0.19	11	39	59	87	34	91	0.83
gi|330506049|ref|YP_004399707.1|	160	DZR	Double	11.2	8.6	0.00023	0.29	1	49	63	113	63	113	0.85
gi|330506049|ref|YP_004399707.1|	160	DZR	Double	4.4	0.3	0.029	38	4	21	95	115	93	125	0.59
gi|330506049|ref|YP_004399707.1|	160	TackOD1	Thaumarchaeal	11.3	1.0	0.00015	0.19	132	177	46	91	13	97	0.84
gi|330506049|ref|YP_004399707.1|	160	TackOD1	Thaumarchaeal	-2.5	0.1	2.7	3.4e+03	146	158	106	118	103	122	0.63
gi|330506049|ref|YP_004399707.1|	160	CpXC	CpXC	1.2	0.2	0.28	3.6e+02	35	44	58	67	36	71	0.73
gi|330506049|ref|YP_004399707.1|	160	CpXC	CpXC	3.8	1.6	0.045	57	28	47	67	86	58	90	0.81
gi|330506049|ref|YP_004399707.1|	160	CpXC	CpXC	5.0	0.0	0.018	23	31	56	100	125	92	143	0.85
gi|330506049|ref|YP_004399707.1|	160	zinc_ribbon_2	zinc-ribbon	9.1	6.7	0.00084	1.1	1	22	62	85	62	85	0.96
gi|330506049|ref|YP_004399707.1|	160	zinc_ribbon_2	zinc-ribbon	2.2	0.2	0.13	1.6e+02	5	20	95	113	95	114	0.71
gi|330506049|ref|YP_004399707.1|	160	A2L_zn_ribbon	A2L	3.0	0.1	0.069	89	17	28	56	67	49	68	0.76
gi|330506049|ref|YP_004399707.1|	160	A2L_zn_ribbon	A2L	0.4	0.2	0.44	5.6e+02	5	12	78	85	76	86	0.78
gi|330506049|ref|YP_004399707.1|	160	A2L_zn_ribbon	A2L	6.1	0.1	0.0072	9.2	3	15	106	118	105	125	0.73
gi|330506049|ref|YP_004399707.1|	160	NMD3	NMD3	9.4	0.0	0.00051	0.65	24	52	41	76	31	81	0.68
gi|330506049|ref|YP_004399707.1|	160	NMD3	NMD3	0.3	2.2	0.31	3.9e+02	1	19	79	112	79	125	0.64
gi|330506049|ref|YP_004399707.1|	160	TerY_C	TerY-C	1.4	0.0	0.25	3.3e+02	78	110	34	68	25	73	0.64
gi|330506049|ref|YP_004399707.1|	160	TerY_C	TerY-C	8.3	3.6	0.0018	2.4	75	117	77	121	72	129	0.86
gi|330506049|ref|YP_004399707.1|	160	zinc-ribbons_6	zinc-ribbons	7.4	3.1	0.0034	4.4	2	38	62	85	34	97	0.66
gi|330506049|ref|YP_004399707.1|	160	zinc-ribbons_6	zinc-ribbons	6.1	6.1	0.0086	11	2	40	62	100	61	125	0.74
gi|330506049|ref|YP_004399707.1|	160	zf-RING_7	C4-type	7.3	0.1	0.0041	5.2	22	33	59	70	35	70	0.75
gi|330506049|ref|YP_004399707.1|	160	zf-RING_7	C4-type	2.3	1.1	0.15	2e+02	26	30	79	83	78	84	0.90
gi|330506049|ref|YP_004399707.1|	160	zf-RING_7	C4-type	-0.9	0.0	1.5	1.9e+03	4	14	94	104	93	107	0.75
gi|330506049|ref|YP_004399707.1|	160	zf-C3HC4_3	Zinc	-3.4	0.0	7.4	9.5e+03	8	14	36	42	34	44	0.54
gi|330506049|ref|YP_004399707.1|	160	zf-C3HC4_3	Zinc	9.8	0.4	0.00054	0.69	24	47	61	86	57	88	0.89
gi|330506049|ref|YP_004399707.1|	160	zf-C3HC4_3	Zinc	1.3	0.6	0.25	3.3e+02	29	44	95	113	91	119	0.60
gi|330506049|ref|YP_004399707.1|	160	zf-ribbon_3	zinc-ribbon	-1.6	0.3	1.5	2e+03	13	20	30	37	30	38	0.77
gi|330506049|ref|YP_004399707.1|	160	zf-ribbon_3	zinc-ribbon	3.9	0.1	0.029	38	4	8	62	66	60	73	0.75
gi|330506049|ref|YP_004399707.1|	160	zf-ribbon_3	zinc-ribbon	10.7	1.7	0.00022	0.28	4	16	78	89	76	91	0.79
gi|330506049|ref|YP_004399707.1|	160	zf-ribbon_3	zinc-ribbon	1.8	0.4	0.13	1.7e+02	17	24	107	114	95	115	0.58
gi|330506049|ref|YP_004399707.1|	160	HypA	Hydrogenase/urease	7.1	1.4	0.0041	5.3	71	95	61	85	54	94	0.78
gi|330506049|ref|YP_004399707.1|	160	HypA	Hydrogenase/urease	1.8	0.7	0.18	2.3e+02	76	96	95	116	89	126	0.63
gi|330506049|ref|YP_004399707.1|	160	zf_C2H2_10	C2H2	10.9	0.6	0.00019	0.25	5	14	63	72	61	73	0.96
gi|330506049|ref|YP_004399707.1|	160	zf_C2H2_10	C2H2	-2.0	1.6	2.1	2.6e+03	5	10	79	84	78	86	0.82