#Protein	Length	Domain	Domain_description	score	bias	c-Evalue	i-Evalue	hmmfrom	hmmto	alifrom	alito	envfrom 	envto	acc
gi|330506031|ref|YP_004399689.1|	223	DUF3213	Protein	10.3	0.9	3.2e-05	0.48	38	74	104	139	96	143	0.83
gi|330506034|ref|YP_004399692.1|	657	VirE	Virulence-associated	15.6	0.1	1.1e-06	0.0084	109	172	410	473	404	484	0.91
gi|330506034|ref|YP_004399692.1|	657	QRPTase_N	Quinolinate	10.7	0.0	4.5e-05	0.33	45	83	78	117	56	120	0.77
gi|330506034|ref|YP_004399692.1|	657	QRPTase_N	Quinolinate	-3.6	0.0	1.4	1e+04	36	45	167	176	166	187	0.75
gi|330506035|ref|YP_004399693.1|	216	DUF3223	Protein	45.4	0.1	9.5e-16	7e-12	2	75	36	108	35	109	0.87
gi|330506035|ref|YP_004399693.1|	216	DUF3223	Protein	-2.7	0.1	0.97	7.2e+03	2	17	192	207	183	212	0.52
gi|330506035|ref|YP_004399693.1|	216	SBDS	Shwachman-Bodian-Diamond	3.5	0.0	0.0077	57	19	52	54	87	40	135	0.78
gi|330506035|ref|YP_004399693.1|	216	SBDS	Shwachman-Bodian-Diamond	9.7	0.2	9e-05	0.67	50	83	178	211	145	216	0.85
gi|330506036|ref|YP_004399694.1|	92	PG_binding_2	Putative	17.9	0.0	4.6e-07	0.0023	9	42	20	53	13	58	0.89
gi|330506036|ref|YP_004399694.1|	92	TCP	TCP	13.6	0.0	1.2e-05	0.062	28	65	28	65	20	89	0.73
gi|330506036|ref|YP_004399694.1|	92	Recombinase	Recombinase	13.0	0.0	1.8e-05	0.087	10	53	19	63	11	86	0.84
gi|330506037|ref|YP_004399695.1|	745	Cast	RIM-binding	11.5	0.2	1.1e-05	0.053	36	99	342	408	330	422	0.82
gi|330506037|ref|YP_004399695.1|	745	ATP-synt_DE	ATP	11.9	2.5	3e-05	0.15	7	40	363	396	361	400	0.82
gi|330506037|ref|YP_004399695.1|	745	DUF2580	Protein	12.3	0.4	3.1e-05	0.15	42	92	323	373	312	378	0.91
gi|330506038|ref|YP_004399696.1|	165	Mnd1	Mnd1	19.3	2.0	1.6e-06	0.00066	79	168	43	139	23	149	0.73
gi|330506038|ref|YP_004399696.1|	165	DUF3450	Protein	19.1	4.1	1.4e-06	0.00058	21	129	42	153	6	158	0.84
gi|330506038|ref|YP_004399696.1|	165	APG6	Autophagy	17.9	4.9	2.9e-06	0.0012	8	92	35	120	29	143	0.81
gi|330506038|ref|YP_004399696.1|	165	CENP-F_leu_zip	Leucine-rich	16.0	5.1	1.8e-05	0.0077	39	94	44	99	26	108	0.59
gi|330506038|ref|YP_004399696.1|	165	CENP-F_leu_zip	Leucine-rich	6.5	0.4	0.016	6.9	7	58	89	140	87	156	0.65
gi|330506038|ref|YP_004399696.1|	165	WEMBL	Weak	15.2	4.9	1.2e-05	0.0052	372	445	43	116	38	146	0.67
gi|330506038|ref|YP_004399696.1|	165	Myosin_tail_1	Myosin	14.8	8.4	1e-05	0.0043	353	474	2	123	1	144	0.85
gi|330506038|ref|YP_004399696.1|	165	HALZ	Homeobox	15.1	1.6	3.3e-05	0.014	11	36	70	95	67	103	0.85
gi|330506038|ref|YP_004399696.1|	165	HALZ	Homeobox	-1.6	0.0	5.3	2.2e+03	31	42	132	143	123	145	0.75
gi|330506038|ref|YP_004399696.1|	165	TMF_TATA_bd	TATA	4.6	3.3	0.057	24	35	88	40	90	32	95	0.71
gi|330506038|ref|YP_004399696.1|	165	TMF_TATA_bd	TATA	14.8	0.8	4.1e-05	0.017	20	89	74	147	73	157	0.83
gi|330506038|ref|YP_004399696.1|	165	Bap31	B-cell	11.2	2.9	0.00041	0.17	144	190	47	93	19	95	0.73
gi|330506038|ref|YP_004399696.1|	165	Bap31	B-cell	4.5	0.0	0.049	21	152	189	104	141	93	144	0.80
gi|330506038|ref|YP_004399696.1|	165	Seryl_tRNA_N	Seryl-tRNA	11.0	6.4	0.00076	0.32	12	96	47	128	14	147	0.72
gi|330506038|ref|YP_004399696.1|	165	Orthopox_A5L	Orthopoxvirus	13.6	1.5	0.00011	0.046	92	160	51	116	11	141	0.80
gi|330506038|ref|YP_004399696.1|	165	Atg14	UV	12.4	6.7	0.00012	0.052	32	140	38	127	11	158	0.53
gi|330506038|ref|YP_004399696.1|	165	DUF4618	Domain	9.5	2.4	0.0013	0.54	160	227	24	91	4	94	0.74
gi|330506038|ref|YP_004399696.1|	165	DUF4618	Domain	4.3	0.0	0.05	21	67	109	89	134	88	138	0.78
gi|330506038|ref|YP_004399696.1|	165	CorA	CorA-like	11.1	6.1	0.00034	0.15	103	220	21	141	5	153	0.78
gi|330506038|ref|YP_004399696.1|	165	TMEM192	TMEM192	10.7	0.6	0.00038	0.16	171	233	80	144	71	146	0.90
gi|330506038|ref|YP_004399696.1|	165	ALIX_LYPXL_bnd	ALIX	9.2	7.5	0.0012	0.49	27	82	55	108	13	142	0.53
gi|330506038|ref|YP_004399696.1|	165	RHH_1	Ribbon-helix-helix	12.4	0.1	0.00026	0.11	6	37	7	38	2	39	0.89
gi|330506038|ref|YP_004399696.1|	165	RHH_1	Ribbon-helix-helix	-1.3	0.1	5.5	2.3e+03	13	27	44	58	43	59	0.64
gi|330506038|ref|YP_004399696.1|	165	RHH_1	Ribbon-helix-helix	-1.0	0.0	4.3	1.8e+03	3	15	121	133	121	135	0.84
gi|330506038|ref|YP_004399696.1|	165	TPR_MLP1_2	TPR/MLP1/MLP2-like	7.0	3.7	0.011	4.5	63	105	40	82	25	86	0.80
gi|330506038|ref|YP_004399696.1|	165	TPR_MLP1_2	TPR/MLP1/MLP2-like	10.4	0.8	0.00093	0.39	60	104	79	123	77	141	0.86
gi|330506038|ref|YP_004399696.1|	165	zf-C4H2	Zinc	11.0	1.8	0.00073	0.31	58	124	38	107	11	157	0.65
gi|330506038|ref|YP_004399696.1|	165	PRP1_N	PRP1	11.7	4.3	0.00057	0.24	67	120	35	87	5	98	0.68
gi|330506038|ref|YP_004399696.1|	165	PRP1_N	PRP1	-0.4	0.0	2.9	1.2e+03	84	115	86	117	83	121	0.74
gi|330506038|ref|YP_004399696.1|	165	DUF1664	Protein	4.1	1.7	0.087	37	79	119	54	94	11	103	0.61
gi|330506038|ref|YP_004399696.1|	165	DUF1664	Protein	7.2	0.1	0.0092	3.9	58	104	96	142	87	146	0.84
gi|330506038|ref|YP_004399696.1|	165	Phage_GPO	Phage	9.6	1.9	0.0011	0.47	198	264	31	93	11	125	0.85
gi|330506038|ref|YP_004399696.1|	165	DUF4200	Domain	9.2	6.3	0.0026	1.1	51	105	45	95	27	105	0.70
gi|330506038|ref|YP_004399696.1|	165	DUF4200	Domain	1.3	0.1	0.68	2.9e+02	73	103	98	121	91	144	0.60
gi|330506038|ref|YP_004399696.1|	165	DUF1319	Protein	9.7	2.1	0.0022	0.92	20	82	30	100	11	114	0.73
gi|330506038|ref|YP_004399696.1|	165	DUF1319	Protein	2.6	0.1	0.33	1.4e+02	58	96	118	156	101	157	0.82
gi|330506038|ref|YP_004399696.1|	165	IncA	IncA	9.6	8.5	0.0014	0.6	77	181	43	143	7	156	0.61
gi|330506038|ref|YP_004399696.1|	165	Cep57_CLD_2	Centrosome	3.9	7.9	0.11	49	27	68	44	85	37	128	0.88
gi|330506038|ref|YP_004399696.1|	165	Cep57_CLD_2	Centrosome	-1.4	0.0	5.1	2.2e+03	9	20	131	142	122	144	0.68
gi|330506038|ref|YP_004399696.1|	165	DUF342	Protein	6.3	5.4	0.0062	2.6	346	412	36	101	6	132	0.60
gi|330506038|ref|YP_004399696.1|	165	TBPIP	Tat	1.9	1.1	0.32	1.4e+02	81	139	12	70	4	75	0.75
gi|330506038|ref|YP_004399696.1|	165	TBPIP	Tat	7.1	4.7	0.0083	3.5	93	130	64	99	34	159	0.57
gi|330506038|ref|YP_004399696.1|	165	V_ATPase_I	V-type	6.2	3.0	0.0043	1.8	55	133	46	116	6	157	0.54
gi|330506038|ref|YP_004399696.1|	165	DUF972	Protein	2.3	0.5	0.47	2e+02	16	48	44	76	14	78	0.58
gi|330506038|ref|YP_004399696.1|	165	DUF972	Protein	7.2	4.0	0.014	6	21	61	63	103	38	158	0.62
gi|330506038|ref|YP_004399696.1|	165	Kinetocho_Slk19	Central	6.3	4.4	0.023	9.7	48	82	70	104	25	109	0.81
gi|330506038|ref|YP_004399696.1|	165	DUF4140	N-terminal	5.3	3.7	0.059	25	55	101	49	95	38	98	0.83
gi|330506038|ref|YP_004399696.1|	165	DUF4140	N-terminal	4.6	0.1	0.096	41	62	103	98	139	90	140	0.80
gi|330506038|ref|YP_004399696.1|	165	V-SNARE	Vesicle	4.4	6.5	0.093	39	8	78	55	123	10	124	0.85
gi|330506038|ref|YP_004399696.1|	165	DivIC	Septum	2.8	2.4	0.19	81	21	53	54	86	26	88	0.71
gi|330506038|ref|YP_004399696.1|	165	DivIC	Septum	7.8	3.4	0.005	2.1	17	55	64	102	58	108	0.87
gi|330506038|ref|YP_004399696.1|	165	DUF2968	Protein	6.6	6.3	0.01	4.3	111	186	14	89	4	95	0.87
gi|330506039|ref|YP_004399697.1|	168	Mei5	Double-strand	18.6	0.3	9.8e-07	0.001	99	218	10	136	2	138	0.70
gi|330506039|ref|YP_004399697.1|	168	TMF_TATA_bd	TATA	17.4	1.7	2.6e-06	0.0027	14	71	39	96	28	114	0.82
gi|330506039|ref|YP_004399697.1|	168	CENP-H	Centromere	16.4	2.1	7.2e-06	0.0076	1	78	47	126	47	129	0.89
gi|330506039|ref|YP_004399697.1|	168	COMP	Cartilage	14.1	0.1	3.5e-05	0.037	8	36	34	63	26	67	0.85
gi|330506039|ref|YP_004399697.1|	168	COMP	Cartilage	-0.7	0.1	1.4	1.5e+03	9	23	79	92	76	95	0.71
gi|330506039|ref|YP_004399697.1|	168	DUF4201	Domain	14.2	1.0	2e-05	0.022	88	126	39	77	34	92	0.89
gi|330506039|ref|YP_004399697.1|	168	DUF2972	Protein	13.2	0.1	5.7e-05	0.06	78	164	32	123	4	131	0.77
gi|330506039|ref|YP_004399697.1|	168	DivIC	Septum	11.6	1.1	0.00013	0.14	18	54	43	78	28	84	0.77
gi|330506039|ref|YP_004399697.1|	168	ADIP	Afadin-	12.0	3.6	0.00014	0.15	53	121	36	106	32	119	0.82
gi|330506039|ref|YP_004399697.1|	168	Bap31	B-cell	11.6	0.1	0.00013	0.14	159	190	40	71	5	73	0.84
gi|330506039|ref|YP_004399697.1|	168	Bap31	B-cell	-1.9	0.1	1.8	1.9e+03	154	171	96	113	80	130	0.45
gi|330506039|ref|YP_004399697.1|	168	DivIVA	DivIVA	12.1	2.3	0.00014	0.15	29	91	39	101	34	128	0.81
gi|330506039|ref|YP_004399697.1|	168	Mnd1	Mnd1	11.0	2.4	0.00022	0.24	68	142	41	113	30	128	0.82
gi|330506039|ref|YP_004399697.1|	168	Atg14	UV	9.8	4.0	0.0003	0.32	72	108	37	73	28	110	0.75
gi|330506039|ref|YP_004399697.1|	168	DUF4140	N-terminal	11.0	1.3	0.00041	0.43	50	96	36	75	7	82	0.50
gi|330506039|ref|YP_004399697.1|	168	TMF_DNA_bd	TATA	8.3	4.6	0.0019	2	21	72	44	95	34	97	0.85
gi|330506039|ref|YP_004399697.1|	168	TMF_DNA_bd	TATA	-2.3	0.0	3.7	3.9e+03	19	25	106	112	99	128	0.52
gi|330506040|ref|YP_004399698.1|	103	TrmB	Sugar-specific	29.6	0.1	3.8e-10	4e-07	9	58	23	72	21	85	0.89
gi|330506040|ref|YP_004399698.1|	103	MarR_2	MarR	27.2	0.0	2.1e-09	2.2e-06	14	62	31	77	23	77	0.90
gi|330506040|ref|YP_004399698.1|	103	HTH_24	Winged	25.9	0.0	4.1e-09	4.4e-06	3	48	22	67	20	67	0.96
gi|330506040|ref|YP_004399698.1|	103	MarR	MarR	26.2	0.0	4.2e-09	4.5e-06	10	59	29	78	22	78	0.91
gi|330506040|ref|YP_004399698.1|	103	PadR	Transcriptional	15.7	0.0	8.5e-06	0.009	17	57	44	75	27	83	0.72
gi|330506040|ref|YP_004399698.1|	103	PaaX	PaaX-like	15.7	0.0	1e-05	0.011	8	61	26	76	23	83	0.84
gi|330506040|ref|YP_004399698.1|	103	HTH_11	HTH	13.5	0.0	3.9e-05	0.041	10	48	31	70	25	75	0.84
gi|330506040|ref|YP_004399698.1|	103	HTH_27	Winged	14.1	0.0	4.2e-05	0.044	23	65	41	82	28	83	0.88
gi|330506040|ref|YP_004399698.1|	103	HTH_41	Helix-turn-helix	12.7	0.0	6.7e-05	0.07	8	40	38	70	37	76	0.92
gi|330506040|ref|YP_004399698.1|	103	DUF387	Putative	12.6	0.0	6.1e-05	0.064	109	158	52	100	36	101	0.91
gi|330506040|ref|YP_004399698.1|	103	HTH_IclR	IclR	12.1	0.0	0.0001	0.11	12	49	31	67	27	69	0.88
gi|330506040|ref|YP_004399698.1|	103	HTH_34	Winged	12.2	0.0	0.00013	0.13	16	62	38	82	27	89	0.86
gi|330506040|ref|YP_004399698.1|	103	IF2_N	Translation	11.3	0.0	0.00018	0.19	5	19	38	52	35	56	0.87
gi|330506040|ref|YP_004399698.1|	103	DUF3489	Protein	11.9	0.0	0.00015	0.15	13	71	25	81	12	82	0.74
gi|330506042|ref|YP_004399700.1|	131	MarR	MarR	-1.1	0.0	0.8	1.5e+03	8	31	7	30	6	35	0.80
gi|330506042|ref|YP_004399700.1|	131	MarR	MarR	3.2	0.0	0.036	67	1	22	40	61	40	65	0.90
gi|330506042|ref|YP_004399700.1|	131	MarR	MarR	12.1	0.0	6e-05	0.11	13	45	92	124	86	129	0.91
gi|330506042|ref|YP_004399700.1|	131	HTH_38	Helix-turn-helix	16.0	0.1	3.3e-06	0.0061	11	43	86	119	76	124	0.88
gi|330506042|ref|YP_004399700.1|	131	MarR_2	MarR	-1.8	0.0	1.3	2.4e+03	2	18	39	55	38	60	0.80
gi|330506042|ref|YP_004399700.1|	131	MarR_2	MarR	15.8	0.0	4.2e-06	0.0077	23	50	98	125	78	129	0.88
gi|330506042|ref|YP_004399700.1|	131	HTH_24	Winged	-2.4	0.0	1.7	3.1e+03	8	18	47	57	45	60	0.76
gi|330506042|ref|YP_004399700.1|	131	HTH_24	Winged	14.1	0.0	1.2e-05	0.022	16	45	95	124	85	124	0.89
gi|330506042|ref|YP_004399700.1|	131	CENP-B_N	CENP-B	12.2	0.0	4.7e-05	0.087	20	40	93	114	87	124	0.86
gi|330506042|ref|YP_004399700.1|	131	DUF3722	Protein	12.8	0.1	2.6e-05	0.048	96	175	30	107	28	126	0.69
gi|330506042|ref|YP_004399700.1|	131	TrmB	Sugar-specific	11.3	0.0	0.00011	0.2	20	50	94	124	89	129	0.90
gi|330506042|ref|YP_004399700.1|	131	HTH_20	Helix-turn-helix	-1.4	0.0	1.1	2e+03	12	26	33	46	20	49	0.71
gi|330506042|ref|YP_004399700.1|	131	HTH_20	Helix-turn-helix	10.6	0.0	0.0002	0.36	19	52	91	124	77	127	0.88
gi|330506043|ref|YP_004399701.1|	209	DUF892	Domain	-0.9	0.0	0.59	1.3e+03	40	57	27	44	7	47	0.84
gi|330506043|ref|YP_004399701.1|	209	DUF892	Domain	11.2	0.0	0.00011	0.23	32	82	58	110	51	141	0.71
gi|330506043|ref|YP_004399701.1|	209	DUF892	Domain	0.7	0.0	0.18	3.9e+02	14	45	148	180	145	186	0.79
gi|330506043|ref|YP_004399701.1|	209	Vps16_C	Vps16,	12.6	0.0	2.2e-05	0.048	112	190	60	141	55	155	0.83
gi|330506043|ref|YP_004399701.1|	209	Seryl_tRNA_N	Seryl-tRNA	-1.8	0.0	1.4	3e+03	31	44	24	37	6	43	0.53
gi|330506043|ref|YP_004399701.1|	209	Seryl_tRNA_N	Seryl-tRNA	11.8	0.0	8.3e-05	0.18	35	102	60	127	51	130	0.90
gi|330506043|ref|YP_004399701.1|	209	DUF2205	Predicted	-3.1	0.0	2.7	5.8e+03	18	27	31	40	22	43	0.50
gi|330506043|ref|YP_004399701.1|	209	DUF2205	Predicted	13.0	0.1	2.5e-05	0.054	19	50	64	98	55	122	0.75
gi|330506043|ref|YP_004399701.1|	209	DUF2205	Predicted	-2.9	0.0	2.3	4.9e+03	18	29	154	166	144	173	0.52
gi|330506043|ref|YP_004399701.1|	209	BLOC1_2	Biogenesis	1.9	0.0	0.12	2.4e+02	39	71	12	44	5	46	0.54
gi|330506043|ref|YP_004399701.1|	209	BLOC1_2	Biogenesis	8.6	0.4	0.00093	2	42	92	61	111	58	113	0.93
gi|330506043|ref|YP_004399701.1|	209	FlaC_arch	Flagella	1.8	0.0	0.11	2.3e+02	3	19	25	41	23	45	0.83
gi|330506043|ref|YP_004399701.1|	209	FlaC_arch	Flagella	5.4	0.5	0.0079	17	10	35	64	89	60	114	0.51
gi|330506043|ref|YP_004399701.1|	209	DUF4164	Domain	-0.5	0.0	0.63	1.3e+03	5	17	26	38	5	44	0.57
gi|330506043|ref|YP_004399701.1|	209	DUF4164	Domain	10.3	0.9	0.00027	0.58	14	77	60	123	60	128	0.96
gi|330506043|ref|YP_004399701.1|	209	DUF4164	Domain	-2.8	0.1	3.2	6.8e+03	40	51	164	175	149	182	0.61
gi|330506045|ref|YP_004399703.1|	223	DUF3213	Protein	10.3	0.9	3.2e-05	0.48	38	74	104	139	96	143	0.83
gi|330506047|ref|YP_004399705.1|	209	VirE	Virulence-associated	17.0	0.1	2e-07	0.003	111	172	106	167	98	180	0.90
gi|330506049|ref|YP_004399707.1|	160	tRNA-synt_1g	tRNA	130.4	0.0	3.9e-41	6.4e-38	61	202	1	142	1	155	0.95
gi|330506049|ref|YP_004399707.1|	160	Rpr2	RNAse	8.9	0.0	0.00076	1.2	25	56	39	70	26	84	0.89
gi|330506049|ref|YP_004399707.1|	160	Rpr2	RNAse	4.6	0.0	0.017	28	41	53	101	113	97	115	0.86
gi|330506049|ref|YP_004399707.1|	160	DZR	Double	11.2	6.8	0.00015	0.24	1	50	63	113	34	124	0.86
gi|330506049|ref|YP_004399707.1|	160	zinc_ribbon_2	zinc-ribbon	11.0	4.8	0.00013	0.21	1	22	62	85	62	86	0.96
gi|330506049|ref|YP_004399707.1|	160	zinc_ribbon_2	zinc-ribbon	4.8	0.7	0.012	20	5	20	95	113	95	115	0.89
gi|330506049|ref|YP_004399707.1|	160	zf-C3HC4_3	Zinc	8.9	0.2	0.00069	1.1	24	46	61	85	56	88	0.88
gi|330506049|ref|YP_004399707.1|	160	zf-C3HC4_3	Zinc	1.5	0.3	0.14	2.3e+02	4	9	108	113	91	122	0.63
gi|330506049|ref|YP_004399707.1|	160	BIR	Inhibitor	9.8	1.0	0.00059	0.97	13	46	37	70	28	100	0.83
gi|330506049|ref|YP_004399707.1|	160	BIR	Inhibitor	-2.0	0.0	3	5e+03	36	46	106	116	99	125	0.73
gi|330506049|ref|YP_004399707.1|	160	zf-H2C2_2	Zinc-finger	2.6	0.1	0.11	1.8e+02	16	22	62	68	50	70	0.87
gi|330506049|ref|YP_004399707.1|	160	zf-H2C2_2	Zinc-finger	6.0	0.2	0.0093	15	16	22	78	84	71	86	0.86
gi|330506049|ref|YP_004399707.1|	160	zf-H2C2_2	Zinc-finger	-0.5	0.0	1.1	1.8e+03	17	22	109	114	102	118	0.83
gi|330506049|ref|YP_004399707.1|	160	UPF0547	Uncharacterised	8.6	1.9	0.00085	1.4	3	21	63	83	62	84	0.85
gi|330506049|ref|YP_004399707.1|	160	UPF0547	Uncharacterised	-1.4	0.2	1.1	1.9e+03	16	21	108	113	105	113	0.68
gi|330506049|ref|YP_004399707.1|	160	HypA	Hydrogenase	5.8	0.8	0.0062	10	71	95	61	85	56	94	0.87
gi|330506049|ref|YP_004399707.1|	160	HypA	Hydrogenase	2.6	0.3	0.059	97	75	96	94	116	85	126	0.72