#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.11	gi|298673979|ref|YP_003725729.1|	-	1.2e-22	79.7	0.3	3.2e-22	78.3	0.3	1.8	1	0	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
AAA_22	PF13401.6	gi|298673979|ref|YP_003725729.1|	-	8.2e-11	42.3	0.1	3.3e-10	40.4	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|298673979|ref|YP_003725729.1|	-	2.9e-10	40.8	0.6	1.1e-08	35.6	0.1	2.6	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.29	gi|298673979|ref|YP_003725729.1|	-	3.1e-08	34.1	0.4	9.1e-08	32.6	0.4	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TniB	PF05621.11	gi|298673979|ref|YP_003725729.1|	-	2.5e-07	30.3	0.2	1.9e-06	27.4	0.0	2.0	2	0	0	2	2	2	1	Bacterial	TniB	protein
ATPase_2	PF01637.18	gi|298673979|ref|YP_003725729.1|	-	5.3e-07	29.8	0.6	1.5e-06	28.3	0.6	1.8	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
NACHT	PF05729.12	gi|298673979|ref|YP_003725729.1|	-	1.9e-06	27.9	0.0	4e-06	26.8	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
DUF2075	PF09848.9	gi|298673979|ref|YP_003725729.1|	-	0.00066	19.0	0.0	0.00096	18.5	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
KAP_NTPase	PF07693.14	gi|298673979|ref|YP_003725729.1|	-	0.0011	18.2	2.2	0.68	9.1	0.7	2.3	1	1	0	2	2	2	2	KAP	family	P-loop	domain
DUF815	PF05673.13	gi|298673979|ref|YP_003725729.1|	-	0.0033	16.6	0.2	0.029	13.6	0.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
DEAD	PF00270.29	gi|298673979|ref|YP_003725729.1|	-	0.0039	17.0	5.4	0.56	9.9	0.2	3.0	2	1	1	3	3	3	2	DEAD/DEAH	box	helicase
RuvB_N	PF05496.12	gi|298673979|ref|YP_003725729.1|	-	0.0043	16.8	0.0	0.35	10.6	0.0	2.6	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Sigma54_activat	PF00158.26	gi|298673979|ref|YP_003725729.1|	-	0.011	15.5	0.1	0.026	14.2	0.0	1.6	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Bac_DnaA	PF00308.18	gi|298673979|ref|YP_003725729.1|	-	0.012	15.4	1.4	0.12	12.2	1.4	2.1	1	1	0	1	1	1	0	Bacterial	dnaA	protein
AAA_18	PF13238.6	gi|298673979|ref|YP_003725729.1|	-	0.014	15.9	0.2	0.056	14.0	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_2	PF07724.14	gi|298673979|ref|YP_003725729.1|	-	0.027	14.6	0.2	0.16	12.1	0.1	2.3	2	1	0	2	2	2	0	AAA	domain	(Cdc48	subfamily)
AAA_24	PF13479.6	gi|298673979|ref|YP_003725729.1|	-	0.037	13.7	0.1	0.069	12.9	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
T2SSE	PF00437.20	gi|298673979|ref|YP_003725729.1|	-	0.058	12.4	0.2	0.15	11.0	0.0	1.7	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_7	PF12775.7	gi|298673979|ref|YP_003725729.1|	-	0.062	12.8	0.0	0.11	12.0	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
ResIII	PF04851.15	gi|298673979|ref|YP_003725729.1|	-	0.077	13.0	0.2	0.29	11.1	0.2	2.0	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_assoc_2	PF16193.5	gi|298673979|ref|YP_003725729.1|	-	0.13	12.6	0.1	0.34	11.3	0.1	1.7	1	0	0	1	1	1	0	AAA	C-terminal	domain
RNA_helicase	PF00910.22	gi|298673979|ref|YP_003725729.1|	-	0.14	12.6	0.0	0.37	11.2	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
AAA_25	PF13481.6	gi|298673979|ref|YP_003725729.1|	-	0.15	11.6	0.0	0.4	10.2	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
TsaE	PF02367.17	gi|298673979|ref|YP_003725729.1|	-	0.16	12.0	0.0	0.34	10.9	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
LPG_synthase_TM	PF03706.13	gi|298673980|ref|YP_003725730.1|	-	9.4e-50	169.8	13.2	1.1e-49	169.6	13.2	1.0	1	0	0	1	1	1	1	Lysylphosphatidylglycerol	synthase	TM	region
Glyco_trans_1_3	PF13528.6	gi|298673981|ref|YP_003725731.1|	-	1.2e-17	64.2	0.0	4.6e-17	62.3	0.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	1
Glyco_tran_28_C	PF04101.16	gi|298673981|ref|YP_003725731.1|	-	2.4e-13	50.4	0.0	3.8e-13	49.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
UDPGT	PF00201.18	gi|298673981|ref|YP_003725731.1|	-	2.2e-09	36.7	0.0	7.9e-09	34.8	0.0	1.7	2	0	0	2	2	2	1	UDP-glucoronosyl	and	UDP-glucosyl	transferase
Glyco_transf_4	PF13439.6	gi|298673981|ref|YP_003725731.1|	-	0.0013	18.7	0.0	0.0029	17.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_4	PF13692.6	gi|298673981|ref|YP_003725731.1|	-	0.01	16.3	0.0	0.016	15.6	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Peptidase_S24	PF00717.23	gi|298673982|ref|YP_003725732.1|	-	8e-06	25.7	0.0	1.3e-05	25.0	0.0	1.4	1	0	0	1	1	1	1	Peptidase	S24-like
DNA_pol_E_B	PF04042.16	gi|298673983|ref|YP_003725733.1|	-	8.9e-15	54.6	0.0	1.5e-14	53.9	0.0	1.4	1	0	0	1	1	1	1	DNA	polymerase	alpha/epsilon	subunit	B
Metallophos	PF00149.28	gi|298673983|ref|YP_003725733.1|	-	3.8e-11	43.9	1.1	6.4e-11	43.1	1.1	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|298673983|ref|YP_003725733.1|	-	7.2e-10	39.3	0.2	2.9e-09	37.4	0.2	2.0	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
tRNA_anti-codon	PF01336.25	gi|298673983|ref|YP_003725733.1|	-	6.6e-06	26.0	0.7	1.5e-05	24.8	0.1	2.0	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
Radical_SAM	PF04055.21	gi|298673984|ref|YP_003725734.1|	-	3.6e-21	76.3	0.1	1.1e-20	74.7	0.1	1.7	1	1	0	1	1	1	1	Radical	SAM	superfamily
Wyosine_form	PF08608.12	gi|298673984|ref|YP_003725734.1|	-	7.3e-20	71.1	0.0	1.2e-19	70.3	0.0	1.4	1	0	0	1	1	1	1	Wyosine	base	formation
Hydrolase	PF00702.26	gi|298673984|ref|YP_003725734.1|	-	0.036	14.3	0.0	0.05	13.9	0.0	1.4	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
eRF1_2	PF03464.15	gi|298673985|ref|YP_003725735.1|	-	6.1e-42	143.1	0.0	1.5e-41	141.8	0.0	1.7	2	0	0	2	2	2	1	eRF1	domain	2
eRF1_3	PF03465.15	gi|298673985|ref|YP_003725735.1|	-	9.2e-35	119.5	0.2	8.1e-34	116.5	0.1	2.2	2	0	0	2	2	2	1	eRF1	domain	3
baeRF_family10	PF18854.1	gi|298673985|ref|YP_003725735.1|	-	1.1e-12	48.4	0.0	1.7e-12	47.8	0.0	1.2	1	0	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	10
eRF1_1	PF03463.15	gi|298673985|ref|YP_003725735.1|	-	1.6e-12	47.6	0.0	3.3e-12	46.5	0.0	1.6	1	0	0	1	1	1	1	eRF1	domain	1
acVLRF1	PF18859.1	gi|298673985|ref|YP_003725735.1|	-	3.1e-12	46.9	0.0	5.2e-12	46.2	0.0	1.4	1	0	0	1	1	1	1	Actinobacteria/chloroflexi	VLRF1	release	factor
Rad50_zn_hook	PF04423.14	gi|298673985|ref|YP_003725735.1|	-	0.0096	15.7	0.1	5.4	6.9	0.0	3.9	4	0	0	4	4	4	1	Rad50	zinc	hook	motif
HypA	PF01155.19	gi|298673985|ref|YP_003725735.1|	-	0.023	14.7	0.0	0.049	13.7	0.0	1.6	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
PknG_rubred	PF16919.5	gi|298673985|ref|YP_003725735.1|	-	0.025	14.7	0.1	0.05	13.8	0.1	1.4	1	0	0	1	1	1	0	Protein	kinase	G	rubredoxin	domain
baeRF_family12	PF18856.1	gi|298673985|ref|YP_003725735.1|	-	0.026	15.1	0.1	0.063	13.9	0.1	1.7	1	0	0	1	1	1	0	Bacterial	archaeo-eukaryotic	release	factor	family	12
RNA_POL_M_15KD	PF02150.16	gi|298673985|ref|YP_003725735.1|	-	0.085	12.8	0.7	1.1	9.2	0.0	2.6	3	0	0	3	3	3	0	RNA	polymerases	M/15	Kd	subunit
IBR	PF01485.21	gi|298673985|ref|YP_003725735.1|	-	0.11	12.7	0.2	0.24	11.6	0.2	1.5	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
TF_Zn_Ribbon	PF08271.12	gi|298673985|ref|YP_003725735.1|	-	0.12	11.9	0.3	6.5	6.4	0.1	2.6	2	0	0	2	2	2	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|298673985|ref|YP_003725735.1|	-	0.14	12.3	4.5	0.6	10.3	1.8	2.6	2	1	0	2	2	2	0	Zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|298673985|ref|YP_003725735.1|	-	0.18	11.5	2.0	0.23	11.2	0.1	2.0	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_4	PF13717.6	gi|298673985|ref|YP_003725735.1|	-	0.27	11.2	0.6	30	4.6	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Prok-RING_1	PF14446.6	gi|298673985|ref|YP_003725735.1|	-	0.53	10.3	1.9	6.8	6.7	0.1	2.3	1	1	2	3	3	3	0	Prokaryotic	RING	finger	family	1
Rubredoxin_2	PF18073.1	gi|298673985|ref|YP_003725735.1|	-	2	8.2	5.1	13	5.6	0.6	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
zf-ribbon_3	PF13248.6	gi|298673985|ref|YP_003725735.1|	-	6.2	6.4	5.5	36	4.0	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
tRNA-synt_1d	PF00750.19	gi|298673986|ref|YP_003725736.1|	-	2.5e-42	145.1	3.9	3.5e-42	144.6	3.9	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.15	gi|298673986|ref|YP_003725736.1|	-	2.2e-34	118.2	0.0	4.8e-34	117.1	0.0	1.6	1	0	0	1	1	1	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.16	gi|298673986|ref|YP_003725736.1|	-	5.8e-13	49.2	0.0	1.5e-12	48.0	0.0	1.8	1	0	0	1	1	1	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1f	PF01921.18	gi|298673986|ref|YP_003725736.1|	-	7.9e-07	28.3	0.1	0.01	14.8	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1g	PF09334.11	gi|298673986|ref|YP_003725736.1|	-	6.1e-05	21.9	5.2	0.056	12.2	0.1	4.1	4	1	1	5	5	5	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|298673986|ref|YP_003725736.1|	-	0.00011	21.7	0.3	0.00028	20.3	0.2	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1	PF00133.22	gi|298673986|ref|YP_003725736.1|	-	0.0041	15.4	0.1	0.0084	14.4	0.0	1.6	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DUF4375	PF14300.6	gi|298673986|ref|YP_003725736.1|	-	0.018	15.3	0.4	0.051	13.8	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4375)
FKBP_C	PF00254.28	gi|298673987|ref|YP_003725737.1|	-	7.2e-23	80.7	0.2	9.7e-23	80.3	0.2	1.2	1	0	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
OrfB_IS605	PF01385.19	gi|298673988|ref|YP_003725738.1|	-	5.6e-27	94.4	1.9	1.3e-26	93.2	1.9	1.6	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298673988|ref|YP_003725738.1|	-	1.8e-23	82.3	0.3	3.6e-23	81.3	0.3	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298673988|ref|YP_003725738.1|	-	8.6e-20	70.0	2.6	1.9e-19	68.9	2.6	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298673988|ref|YP_003725738.1|	-	0.012	15.7	0.3	0.03	14.5	0.3	1.6	1	0	0	1	1	1	0	Piccolo	Zn-finger
Phage_GP20	PF06810.11	gi|298673988|ref|YP_003725738.1|	-	0.032	14.1	3.5	0.29	10.9	1.7	2.4	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
MapZ_EC1	PF18041.1	gi|298673988|ref|YP_003725738.1|	-	0.52	10.5	6.0	0.21	11.8	1.3	2.3	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
Oxidored_molyb	PF00174.19	gi|298673989|ref|YP_003725739.1|	-	1.7e-39	135.2	0.0	2.4e-39	134.7	0.0	1.2	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
URO-D	PF01208.17	gi|298673990|ref|YP_003725740.1|	-	2.4e-82	276.9	0.0	2.6e-82	276.7	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
HPS3_C	PF14763.6	gi|298673990|ref|YP_003725740.1|	-	0.16	11.3	0.0	0.26	10.6	0.0	1.2	1	0	0	1	1	1	0	Hermansky-Pudlak	syndrome	3,	C-terminal
URO-D	PF01208.17	gi|298673991|ref|YP_003725741.1|	-	4.8e-84	282.5	0.0	5.4e-84	282.3	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Meth_synt_2	PF01717.18	gi|298673992|ref|YP_003725742.1|	-	0.17	11.1	0.1	1.1	8.5	0.0	2.4	2	1	0	2	2	2	0	Cobalamin-independent	synthase,	Catalytic	domain
SpoIIM	PF01944.17	gi|298673993|ref|YP_003725743.1|	-	4.5e-14	52.8	13.9	4.5e-14	52.8	5.9	2.3	2	0	0	2	2	2	2	Stage	II	sporulation	protein	M
Phage_30_8	PF06019.11	gi|298673993|ref|YP_003725743.1|	-	0.048	13.6	0.4	0.096	12.6	0.4	1.4	1	0	0	1	1	1	0	Phage	GP30.8	protein
ATPase	PF06745.13	gi|298673994|ref|YP_003725744.1|	-	3.4e-49	167.3	0.0	4.8e-49	166.8	0.0	1.2	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|298673994|ref|YP_003725744.1|	-	1.3e-06	28.1	0.0	0.0065	16.1	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
DnaB_C	PF03796.15	gi|298673994|ref|YP_003725744.1|	-	5.5e-06	25.9	0.0	1.5e-05	24.5	0.0	1.6	1	1	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
Rad51	PF08423.11	gi|298673994|ref|YP_003725744.1|	-	0.00049	19.4	0.4	0.041	13.1	0.2	2.1	2	0	0	2	2	2	1	Rad51
GvpD	PF07088.11	gi|298673994|ref|YP_003725744.1|	-	0.00098	17.9	0.0	0.0023	16.6	0.0	1.6	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
DUF2075	PF09848.9	gi|298673994|ref|YP_003725744.1|	-	0.0014	17.9	0.0	0.0021	17.4	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_24	PF13479.6	gi|298673994|ref|YP_003725744.1|	-	0.002	17.9	0.1	0.071	12.8	0.1	2.5	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|298673994|ref|YP_003725744.1|	-	0.0027	18.0	0.0	0.011	16.0	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|298673994|ref|YP_003725744.1|	-	0.012	15.6	0.0	0.04	13.9	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|298673994|ref|YP_003725744.1|	-	0.04	14.1	0.0	0.13	12.4	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
RecA	PF00154.21	gi|298673994|ref|YP_003725744.1|	-	0.048	13.1	0.1	0.1	12.0	0.0	1.5	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
T2SSE	PF00437.20	gi|298673994|ref|YP_003725744.1|	-	0.056	12.5	0.1	0.095	11.7	0.1	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_16	PF13191.6	gi|298673994|ref|YP_003725744.1|	-	0.057	13.8	0.1	0.066	13.6	0.1	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_19	PF13245.6	gi|298673994|ref|YP_003725744.1|	-	0.09	13.1	0.0	0.18	12.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.6	gi|298673994|ref|YP_003725744.1|	-	0.096	12.5	0.0	0.16	11.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|298673994|ref|YP_003725744.1|	-	0.2	11.3	0.0	0.33	10.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
GTP_EFTU_D2	PF03144.25	gi|298673996|ref|YP_003725746.1|	-	1.7e-07	31.6	0.0	4.8e-07	30.1	0.0	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
GTP_EFTU	PF00009.27	gi|298673996|ref|YP_003725746.1|	-	0.00026	20.6	0.0	0.001	18.7	0.0	1.8	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Lig_C	PF18330.1	gi|298673997|ref|YP_003725747.1|	-	4.6e-45	152.7	0.3	9.6e-45	151.6	0.3	1.6	1	0	0	1	1	1	1	Ligase	Pab1020	C-terminal	region
RNA_ligase	PF09414.10	gi|298673997|ref|YP_003725747.1|	-	5.1e-19	69.1	0.2	8.7e-19	68.4	0.2	1.4	1	0	0	1	1	1	1	RNA	ligase
DNA_ligase_A_M	PF01068.21	gi|298673997|ref|YP_003725747.1|	-	3.2e-10	40.0	0.1	2.9e-08	33.6	0.1	2.3	1	1	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
CBS	PF00571.28	gi|298673998|ref|YP_003725748.1|	-	7e-40	135.3	15.0	1.1e-12	48.1	0.2	4.1	4	0	0	4	4	4	4	CBS	domain
DUF370	PF04025.12	gi|298673998|ref|YP_003725748.1|	-	0.27	11.4	3.7	36	4.6	0.1	3.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF370)
CBS	PF00571.28	gi|298673999|ref|YP_003725749.1|	-	4.6e-49	164.7	17.1	6.4e-13	48.9	0.7	4.1	4	0	0	4	4	4	4	CBS	domain
Acetyltransf_10	PF13673.7	gi|298673999|ref|YP_003725749.1|	-	0.022	14.7	0.0	10	6.1	0.0	3.1	3	0	0	3	3	3	0	Acetyltransferase	(GNAT)	domain
CBS	PF00571.28	gi|298674000|ref|YP_003725750.1|	-	3.1e-55	184.4	7.1	1.6e-13	50.9	0.0	4.2	4	0	0	4	4	4	4	CBS	domain
CBS	PF00571.28	gi|298674001|ref|YP_003725751.1|	-	1.8e-46	156.4	8.3	1.2e-11	44.8	0.3	4.0	4	0	0	4	4	4	4	CBS	domain
Tom6	PF17112.5	gi|298674001|ref|YP_003725751.1|	-	0.19	11.3	0.1	0.33	10.5	0.1	1.4	1	0	0	1	1	1	0	Mitochondrial	import	receptor	subunit	Tom6,	fungal
CBS	PF00571.28	gi|298674002|ref|YP_003725752.1|	-	7.8e-28	96.7	6.4	5.9e-14	52.2	0.3	2.2	2	0	0	2	2	2	2	CBS	domain
DUF5508	PF17621.2	gi|298674002|ref|YP_003725752.1|	-	0.025	13.8	0.6	0.69	9.0	0.1	2.1	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5508)
Alpha-2-MRAP_N	PF06400.11	gi|298674003|ref|YP_003725753.1|	-	0.015	15.3	1.8	0.026	14.5	1.8	1.3	1	0	0	1	1	1	0	Alpha-2-macroglobulin	RAP,	N-terminal	domain
ATG16	PF08614.11	gi|298674004|ref|YP_003725754.1|	-	0.0011	19.2	5.9	0.0013	19.0	5.9	1.2	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
DUF3552	PF12072.8	gi|298674004|ref|YP_003725754.1|	-	0.002	17.6	10.3	0.0024	17.3	10.3	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3552)
FAM76	PF16046.5	gi|298674004|ref|YP_003725754.1|	-	0.0044	16.4	6.7	0.0053	16.2	6.7	1.2	1	0	0	1	1	1	1	FAM76	protein
NTP_transf_2	PF01909.23	gi|298674004|ref|YP_003725754.1|	-	0.066	13.5	0.4	0.11	12.8	0.4	1.4	1	0	0	1	1	1	0	Nucleotidyltransferase	domain
tRNA_anti-codon	PF01336.25	gi|298674005|ref|YP_003725755.1|	-	1.6e-25	88.9	8.4	1.9e-08	34.1	0.3	3.7	3	1	1	4	4	4	3	OB-fold	nucleic	acid	binding	domain
REPA_OB_2	PF16900.5	gi|298674005|ref|YP_003725755.1|	-	8.2e-13	48.1	6.7	0.0028	17.6	0.7	3.3	3	0	0	3	3	3	3	Replication	protein	A	OB	domain
CDC24_OB3	PF17244.2	gi|298674005|ref|YP_003725755.1|	-	2.3e-12	47.1	2.1	0.00016	21.4	0.2	3.2	2	1	1	3	3	3	3	Cell	division	control	protein	24,	OB	domain	3
DUF3127	PF11325.8	gi|298674005|ref|YP_003725755.1|	-	0.0015	18.7	2.9	0.34	11.2	0.4	3.6	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF3127)
Rep_fac-A_C	PF08646.10	gi|298674005|ref|YP_003725755.1|	-	0.02	14.7	0.4	12	5.6	0.0	3.2	3	0	0	3	3	3	0	Replication	factor-A	C	terminal	domain
DUF961	PF06125.11	gi|298674005|ref|YP_003725755.1|	-	0.033	14.5	0.5	0.55	10.6	0.0	2.7	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF961)
DUF4082	PF13313.6	gi|298674005|ref|YP_003725755.1|	-	0.039	14.0	0.1	21	5.2	0.0	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4082)
CspB_prodomain	PF18425.1	gi|298674005|ref|YP_003725755.1|	-	0.079	13.0	1.0	1.6	8.7	0.0	2.6	2	0	0	2	2	2	0	Csp	protease	B	prodomain
DUF2240	PF09999.9	gi|298674005|ref|YP_003725755.1|	-	0.083	12.5	0.0	0.14	11.8	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2240)
PTS_2-RNA	PF01885.16	gi|298674006|ref|YP_003725756.1|	-	8.4e-26	91.1	0.0	1.1e-25	90.8	0.0	1.1	1	0	0	1	1	1	1	RNA	2'-phosphotransferase,	Tpt1	/	KptA	family
OST-HTH	PF12872.7	gi|298674006|ref|YP_003725756.1|	-	0.071	12.9	0.0	0.21	11.5	0.0	1.9	1	1	0	1	1	1	0	OST-HTH/LOTUS	domain
GvpH	PF05455.11	gi|298674006|ref|YP_003725756.1|	-	0.087	12.9	0.0	0.1	12.7	0.0	1.1	1	0	0	1	1	1	0	GvpH
RTC	PF01137.21	gi|298674007|ref|YP_003725757.1|	-	1.6e-78	263.0	0.0	1.8e-78	262.8	0.0	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.13	gi|298674007|ref|YP_003725757.1|	-	5.9e-14	52.4	0.0	1e-13	51.7	0.0	1.4	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
Pyr_redox_2	PF07992.14	gi|298674008|ref|YP_003725758.1|	-	1.2e-47	162.6	1.5	1.5e-47	162.2	1.5	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|298674008|ref|YP_003725758.1|	-	8.7e-23	80.7	5.6	7.3e-17	61.7	0.5	3.4	3	0	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|298674008|ref|YP_003725758.1|	-	2.4e-15	56.6	2.8	1.1e-10	41.3	0.6	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|298674008|ref|YP_003725758.1|	-	9.1e-15	54.9	0.0	2.6e-14	53.4	0.0	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
DAO	PF01266.24	gi|298674008|ref|YP_003725758.1|	-	2e-11	44.1	4.1	0.00048	19.8	0.1	4.2	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
K_oxygenase	PF13434.6	gi|298674008|ref|YP_003725758.1|	-	1.6e-10	40.7	0.8	5e-07	29.2	0.0	3.0	1	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_2	PF00890.24	gi|298674008|ref|YP_003725758.1|	-	5.3e-08	32.4	5.0	6e-05	22.3	0.1	3.4	3	1	0	3	3	3	2	FAD	binding	domain
HI0933_like	PF03486.14	gi|298674008|ref|YP_003725758.1|	-	5.3e-06	25.4	8.6	0.045	12.5	0.0	4.1	3	1	1	4	4	4	2	HI0933-like	protein
Sacchrp_dh_NADP	PF03435.18	gi|298674008|ref|YP_003725758.1|	-	0.00037	20.7	1.6	0.013	15.7	0.2	2.4	2	0	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
Shikimate_DH	PF01488.20	gi|298674008|ref|YP_003725758.1|	-	0.0013	18.8	1.7	1.4	8.9	0.2	2.6	2	0	0	2	2	2	2	Shikimate	/	quinate	5-dehydrogenase
Lycopene_cycl	PF05834.12	gi|298674008|ref|YP_003725758.1|	-	0.0013	17.9	1.2	0.2	10.7	0.1	2.9	3	0	0	3	3	3	1	Lycopene	cyclase	protein
NAD_binding_7	PF13241.6	gi|298674008|ref|YP_003725758.1|	-	0.0013	19.1	0.2	0.1	13.1	0.0	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
NAD_binding_8	PF13450.6	gi|298674008|ref|YP_003725758.1|	-	0.0021	18.2	2.3	0.0088	16.3	0.1	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
3HCDH_N	PF02737.18	gi|298674008|ref|YP_003725758.1|	-	0.0032	17.4	7.7	0.024	14.5	1.6	3.5	3	1	0	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|298674008|ref|YP_003725758.1|	-	0.0038	16.6	0.3	1.9	7.8	0.0	2.3	2	0	0	2	2	2	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
PglD_N	PF17836.1	gi|298674008|ref|YP_003725758.1|	-	0.004	17.8	4.8	0.086	13.5	0.1	2.7	2	0	0	2	2	2	1	PglD	N-terminal	domain
ThiF	PF00899.21	gi|298674008|ref|YP_003725758.1|	-	0.0061	16.0	1.1	0.34	10.2	0.3	2.5	2	0	0	2	2	2	1	ThiF	family
FAD_binding_3	PF01494.19	gi|298674008|ref|YP_003725758.1|	-	0.0067	15.7	3.6	7.5	5.7	0.0	3.3	4	0	0	4	4	4	0	FAD	binding	domain
ApbA	PF02558.16	gi|298674008|ref|YP_003725758.1|	-	0.0073	16.0	0.4	2.2	7.9	0.0	2.4	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
TrkA_N	PF02254.18	gi|298674008|ref|YP_003725758.1|	-	0.011	16.0	0.3	0.89	9.8	0.0	2.7	2	0	0	2	2	2	0	TrkA-N	domain
DUF1699	PF08004.11	gi|298674008|ref|YP_003725758.1|	-	0.044	13.5	0.1	0.1	12.3	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1699)
NAD_Gly3P_dh_N	PF01210.23	gi|298674008|ref|YP_003725758.1|	-	0.051	13.6	0.4	4.1	7.4	0.0	2.6	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
GIDA	PF01134.22	gi|298674008|ref|YP_003725758.1|	-	0.076	12.1	8.5	0.14	11.3	0.9	3.2	3	1	0	3	3	3	0	Glucose	inhibited	division	protein	A
F420_oxidored	PF03807.17	gi|298674008|ref|YP_003725758.1|	-	0.18	12.4	3.4	0.73	10.5	0.0	3.0	3	0	0	3	3	3	0	NADP	oxidoreductase	coenzyme	F420-dependent
FAD_oxidored	PF12831.7	gi|298674008|ref|YP_003725758.1|	-	0.85	8.9	10.7	10	5.3	0.3	3.5	4	0	0	4	4	4	0	FAD	dependent	oxidoreductase
Toprim_4	PF13662.6	gi|298674010|ref|YP_003725760.1|	-	9.8e-12	45.2	0.9	5.7e-11	42.7	0.1	2.5	3	0	0	3	3	3	1	Toprim	domain
Toprim_2	PF13155.6	gi|298674010|ref|YP_003725760.1|	-	1.2e-05	25.6	0.0	2.9e-05	24.4	0.0	1.7	1	0	0	1	1	1	1	Toprim-like
Toprim	PF01751.22	gi|298674010|ref|YP_003725760.1|	-	0.071	13.3	0.0	0.3	11.3	0.0	2.1	1	1	0	1	1	1	0	Toprim	domain
UPF0058	PF01893.16	gi|298674011|ref|YP_003725761.1|	-	3e-35	120.3	0.3	3.4e-35	120.2	0.3	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0058
Ogr_Delta	PF04606.12	gi|298674011|ref|YP_003725761.1|	-	0.043	13.8	0.2	0.1	12.6	0.0	1.8	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
Acetyltransf_1	PF00583.25	gi|298674012|ref|YP_003725762.1|	-	3e-17	62.9	0.2	4e-17	62.5	0.2	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|298674012|ref|YP_003725762.1|	-	1e-14	54.5	0.1	1.2e-14	54.3	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|298674012|ref|YP_003725762.1|	-	2.5e-12	47.1	1.0	4.4e-12	46.3	1.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|298674012|ref|YP_003725762.1|	-	1.7e-06	28.7	0.2	5.1e-06	27.2	0.2	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|298674012|ref|YP_003725762.1|	-	3e-06	27.1	0.1	4.9e-06	26.4	0.1	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_4	PF13420.7	gi|298674012|ref|YP_003725762.1|	-	4.2e-05	23.7	0.3	0.00013	22.1	0.2	1.8	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_15	PF17013.5	gi|298674012|ref|YP_003725762.1|	-	0.011	15.2	0.1	0.039	13.4	0.1	1.8	1	1	0	1	1	1	0	Putative	acetyl-transferase
Acetyltransf_CG	PF14542.6	gi|298674012|ref|YP_003725762.1|	-	0.02	15.0	0.0	0.037	14.2	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Acetyltransf_9	PF13527.7	gi|298674012|ref|YP_003725762.1|	-	0.053	13.6	0.0	0.54	10.3	0.0	2.1	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|298674012|ref|YP_003725762.1|	-	0.065	12.9	0.0	0.25	11.0	0.0	1.9	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DUF5591	PF17884.1	gi|298674013|ref|YP_003725763.1|	-	1.7e-62	209.9	0.3	5e-62	208.3	0.2	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF5591)
TGT	PF01702.18	gi|298674013|ref|YP_003725763.1|	-	2.1e-19	69.9	0.0	2.7e-17	63.0	0.0	2.4	3	0	0	3	3	3	2	Queuine	tRNA-ribosyltransferase
TGT_C2	PF14810.6	gi|298674013|ref|YP_003725763.1|	-	1.1e-16	60.7	0.0	2.4e-16	59.6	0.0	1.6	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.20	gi|298674013|ref|YP_003725763.1|	-	1.2e-12	47.6	0.2	3e-12	46.3	0.2	1.7	1	0	0	1	1	1	1	PUA	domain
FAD-oxidase_C	PF02913.19	gi|298674014|ref|YP_003725764.1|	-	4.4e-58	196.9	0.0	6e-58	196.4	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.23	gi|298674014|ref|YP_003725764.1|	-	7e-45	152.2	0.1	1.2e-44	151.4	0.1	1.4	1	0	0	1	1	1	1	FAD	binding	domain
CCG	PF02754.16	gi|298674015|ref|YP_003725765.1|	-	2.5e-29	101.3	9.3	1.6e-14	53.9	0.3	2.6	3	0	0	3	3	2	2	Cysteine-rich	domain
Fer4_8	PF13183.6	gi|298674015|ref|YP_003725765.1|	-	4e-11	43.2	4.1	4e-11	43.2	4.1	2.4	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298674015|ref|YP_003725765.1|	-	1.9e-09	37.9	3.6	1.9e-09	37.9	3.6	3.1	4	0	0	4	4	4	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298674015|ref|YP_003725765.1|	-	2.3e-07	31.3	5.9	2.3e-07	31.3	5.9	2.6	3	1	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298674015|ref|YP_003725765.1|	-	7.4e-07	29.2	19.7	8.1e-06	25.9	10.3	3.4	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298674015|ref|YP_003725765.1|	-	3.4e-05	23.5	20.5	0.0018	18.0	1.5	2.9	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298674015|ref|YP_003725765.1|	-	5.8e-05	23.2	15.0	0.00013	22.0	11.0	3.2	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674015|ref|YP_003725765.1|	-	0.00075	19.4	13.8	0.0011	18.9	3.7	3.5	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298674015|ref|YP_003725765.1|	-	0.00094	19.3	13.1	0.033	14.3	0.6	3.7	4	0	0	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674015|ref|YP_003725765.1|	-	0.0018	19.1	17.0	0.013	16.4	0.7	3.5	3	0	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|298674015|ref|YP_003725765.1|	-	0.0035	17.7	1.3	0.0035	17.7	1.3	3.8	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|298674015|ref|YP_003725765.1|	-	0.0082	16.3	3.2	2.7	8.2	0.3	2.7	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298674015|ref|YP_003725765.1|	-	0.028	15.4	5.0	0.028	15.4	5.0	3.5	4	0	0	4	4	2	0	4Fe-4S	binding	domain
Rad50_zn_hook	PF04423.14	gi|298674015|ref|YP_003725765.1|	-	0.044	13.6	0.6	0.48	10.3	0.1	2.9	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
Fer4_13	PF13370.6	gi|298674015|ref|YP_003725765.1|	-	0.069	13.7	9.7	0.78	10.3	0.9	2.9	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_6	PF12837.7	gi|298674015|ref|YP_003725765.1|	-	1.6	8.9	22.9	0.068	13.3	1.8	3.5	4	0	0	4	4	4	0	4Fe-4S	binding	domain
zinc_ribbon_5	PF13719.6	gi|298674015|ref|YP_003725765.1|	-	2.5	7.9	12.4	1.8	8.4	0.8	3.6	4	0	0	4	4	3	0	zinc-ribbon	domain
Radical_SAM_N	PF08497.10	gi|298674016|ref|YP_003725766.1|	-	9.8e-132	438.7	0.2	1.7e-131	437.9	0.0	1.5	2	0	0	2	2	2	1	Radical	SAM	N-terminal
DUF3362	PF11842.8	gi|298674016|ref|YP_003725766.1|	-	2.2e-26	93.0	0.1	3.8e-26	92.2	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3362)
Radical_SAM	PF04055.21	gi|298674016|ref|YP_003725766.1|	-	9.7e-17	61.8	0.1	8.3e-16	58.8	0.1	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|298674016|ref|YP_003725766.1|	-	7.4e-05	22.8	0.0	0.46	10.5	0.0	3.2	4	0	0	4	4	4	2	B12	binding	domain
Lactamase_B	PF00753.27	gi|298674017|ref|YP_003725767.1|	-	1.6e-30	106.6	0.2	1.9e-30	106.4	0.2	1.0	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|298674017|ref|YP_003725767.1|	-	2e-06	27.5	0.2	2.8e-06	27.0	0.2	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|298674017|ref|YP_003725767.1|	-	0.00031	20.3	0.9	0.00064	19.2	0.1	1.8	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily	domain
T3RM_EcoP15I_C	PF18273.1	gi|298674017|ref|YP_003725767.1|	-	0.022	15.0	0.1	0.063	13.6	0.1	1.8	2	0	0	2	2	2	0	Type	III	R-M	EcoP15I	C-terminal	domain
IF-2	PF11987.8	gi|298674017|ref|YP_003725767.1|	-	0.053	13.7	0.1	0.31	11.2	0.0	2.1	2	0	0	2	2	2	0	Translation-initiation	factor	2
TatD_DNase	PF01026.21	gi|298674018|ref|YP_003725768.1|	-	1.9e-66	224.1	0.2	2.1e-66	223.9	0.2	1.0	1	0	0	1	1	1	1	TatD	related	DNase
HMGL-like	PF00682.19	gi|298674019|ref|YP_003725769.1|	-	1.7e-87	293.3	3.7	3.6e-87	292.3	3.7	1.5	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.10	gi|298674019|ref|YP_003725769.1|	-	1.3e-31	109.3	3.9	2.8e-31	108.2	3.9	1.6	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
Radical_SAM	PF04055.21	gi|298674019|ref|YP_003725769.1|	-	0.00025	21.5	0.2	0.0056	17.1	0.0	2.8	3	0	0	3	3	3	1	Radical	SAM	superfamily
Phage_holin_6_1	PF09682.10	gi|298674019|ref|YP_003725769.1|	-	0.27	11.7	3.3	2.4	8.6	0.1	3.6	4	0	0	4	4	4	0	Bacteriophage	holin	of	superfamily	6	(Holin_LLH)
PBP_like_2	PF12849.7	gi|298674020|ref|YP_003725770.1|	-	7.7e-34	117.7	1.6	1.2e-33	117.0	1.6	1.2	1	0	0	1	1	1	1	PBP	superfamily	domain
PBP_like	PF12727.7	gi|298674020|ref|YP_003725770.1|	-	4.8e-26	91.1	0.0	7.6e-26	90.4	0.0	1.3	1	0	0	1	1	1	1	PBP	superfamily	domain
SBP_bac_1	PF01547.25	gi|298674020|ref|YP_003725770.1|	-	0.0078	16.2	4.6	0.012	15.5	4.3	1.6	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.6	gi|298674020|ref|YP_003725770.1|	-	0.13	12.0	0.0	0.47	10.2	0.0	1.9	2	0	0	2	2	2	0	Bacterial	extracellular	solute-binding	protein
BPD_transp_1	PF00528.22	gi|298674021|ref|YP_003725771.1|	-	4.8e-19	68.8	10.0	4.8e-19	68.8	10.0	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF5408	PF17402.2	gi|298674021|ref|YP_003725771.1|	-	1.7	8.6	5.9	0.28	11.1	0.6	2.4	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5408)
Sigma_reg_N	PF13800.6	gi|298674021|ref|YP_003725771.1|	-	2.2	8.6	6.8	7.2	7.0	0.0	3.2	3	0	0	3	3	3	0	Sigma	factor	regulator	N-terminal
BPD_transp_1	PF00528.22	gi|298674022|ref|YP_003725772.1|	-	2.7e-21	76.1	16.3	2.7e-21	76.1	16.3	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF5368	PF17336.2	gi|298674022|ref|YP_003725772.1|	-	4.3	7.5	9.3	2.5	8.3	0.1	3.4	3	1	0	3	3	3	0	Family	of	unknown	function	(DUF5368)
ABC_tran	PF00005.27	gi|298674023|ref|YP_003725773.1|	-	8.3e-33	113.8	0.0	1.2e-32	113.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298674023|ref|YP_003725773.1|	-	1.2e-14	54.8	0.0	2e-07	31.1	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|298674023|ref|YP_003725773.1|	-	5.1e-10	39.2	0.1	4.5e-09	36.1	0.1	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|298674023|ref|YP_003725773.1|	-	1.4e-05	25.3	0.0	3.4e-05	24.1	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|298674023|ref|YP_003725773.1|	-	2.3e-05	24.3	0.0	0.0012	18.6	0.0	2.2	1	1	0	2	2	2	1	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|298674023|ref|YP_003725773.1|	-	0.00018	21.5	0.0	0.0004	20.3	0.0	1.6	1	0	0	1	1	1	1	RsgA	GTPase
Rad17	PF03215.15	gi|298674023|ref|YP_003725773.1|	-	0.00032	20.7	0.0	0.00059	19.8	0.0	1.5	1	0	0	1	1	1	1	Rad17	P-loop	domain
AAA_29	PF13555.6	gi|298674023|ref|YP_003725773.1|	-	0.00041	20.0	0.0	0.00089	19.0	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|298674023|ref|YP_003725773.1|	-	0.00048	20.7	0.2	0.001	19.6	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
AAA_28	PF13521.6	gi|298674023|ref|YP_003725773.1|	-	0.0021	18.3	0.1	0.13	12.5	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|298674023|ref|YP_003725773.1|	-	0.0023	17.7	0.1	0.03	14.0	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.22	gi|298674023|ref|YP_003725773.1|	-	0.0039	16.4	0.0	0.0062	15.8	0.0	1.2	1	1	0	1	1	1	1	NB-ARC	domain
ABC_ATPase	PF09818.9	gi|298674023|ref|YP_003725773.1|	-	0.0044	15.9	0.0	1.1	8.0	0.0	2.2	2	0	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_18	PF13238.6	gi|298674023|ref|YP_003725773.1|	-	0.0059	17.2	0.0	0.015	15.8	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|298674023|ref|YP_003725773.1|	-	0.0059	17.0	0.0	0.0098	16.3	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_25	PF13481.6	gi|298674023|ref|YP_003725773.1|	-	0.0093	15.6	0.1	0.11	12.0	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|298674023|ref|YP_003725773.1|	-	0.0095	15.7	0.0	0.15	11.8	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
ATP-synt_ab	PF00006.25	gi|298674023|ref|YP_003725773.1|	-	0.01	15.5	0.0	0.015	15.0	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_33	PF13671.6	gi|298674023|ref|YP_003725773.1|	-	0.014	15.5	0.0	0.022	14.9	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
ATPase	PF06745.13	gi|298674023|ref|YP_003725773.1|	-	0.017	14.5	0.0	0.25	10.7	0.0	2.1	2	0	0	2	2	2	0	KaiC
PRK	PF00485.18	gi|298674023|ref|YP_003725773.1|	-	0.019	14.7	0.0	0.034	13.9	0.0	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
Adeno_IVa2	PF02456.15	gi|298674023|ref|YP_003725773.1|	-	0.027	13.3	0.0	0.16	10.7	0.0	1.9	2	0	0	2	2	2	0	Adenovirus	IVa2	protein
ATPase_2	PF01637.18	gi|298674023|ref|YP_003725773.1|	-	0.056	13.4	0.3	0.32	10.9	0.0	2.1	2	1	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
RNA_helicase	PF00910.22	gi|298674023|ref|YP_003725773.1|	-	0.07	13.5	0.0	0.25	11.7	0.0	1.9	2	0	0	2	2	2	0	RNA	helicase
NACHT	PF05729.12	gi|298674023|ref|YP_003725773.1|	-	0.076	12.9	0.0	0.18	11.7	0.0	1.5	2	0	0	2	2	1	0	NACHT	domain
AAA	PF00004.29	gi|298674023|ref|YP_003725773.1|	-	0.12	12.8	0.0	2.9	8.3	0.0	2.4	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.6	gi|298674023|ref|YP_003725773.1|	-	0.12	12.5	0.0	0.39	10.7	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.23	gi|298674023|ref|YP_003725773.1|	-	0.12	12.5	0.1	0.31	11.1	0.0	1.7	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
DUF3619	PF12279.8	gi|298674023|ref|YP_003725773.1|	-	0.12	12.7	0.1	0.19	12.1	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3619)
NAC	PF01849.18	gi|298674024|ref|YP_003725774.1|	-	2.9e-19	68.8	2.4	4.2e-19	68.3	2.4	1.3	1	0	0	1	1	1	1	NAC	domain
UBA_4	PF14555.6	gi|298674024|ref|YP_003725774.1|	-	0.081	12.8	0.1	0.15	11.9	0.1	1.4	1	0	0	1	1	1	0	UBA-like	domain
UBA	PF00627.31	gi|298674024|ref|YP_003725774.1|	-	0.089	12.7	0.1	0.089	12.7	0.1	1.8	2	0	0	2	2	2	0	UBA/TS-N	domain
Fe-S_biosyn	PF01521.20	gi|298674025|ref|YP_003725775.1|	-	6.7e-14	52.0	0.0	7.7e-14	51.8	0.0	1.0	1	0	0	1	1	1	1	Iron-sulphur	cluster	biosynthesis
Response_reg	PF00072.24	gi|298674027|ref|YP_003725777.1|	-	9.5e-28	96.6	0.0	1.1e-27	96.4	0.0	1.1	1	0	0	1	1	1	1	Response	regulator	receiver	domain
PRA-CH	PF01502.18	gi|298674028|ref|YP_003725778.1|	-	3.5e-33	113.2	2.5	4.7e-33	112.9	2.5	1.2	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
T2SSE	PF00437.20	gi|298674029|ref|YP_003725779.1|	-	1.7e-10	40.4	0.0	2.9e-10	39.6	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
KH_1	PF00013.29	gi|298674029|ref|YP_003725779.1|	-	4.8e-06	26.3	0.6	1.8e-05	24.5	0.6	2.0	1	0	0	1	1	1	1	KH	domain
PIN	PF01850.21	gi|298674029|ref|YP_003725779.1|	-	9.2e-06	26.2	0.0	2.4e-05	24.8	0.0	1.8	1	0	0	1	1	1	1	PIN	domain
TIP49	PF06068.13	gi|298674029|ref|YP_003725779.1|	-	0.0061	15.8	0.2	0.033	13.4	0.0	2.1	2	0	0	2	2	2	1	TIP49	P-loop	domain
KH_2	PF07650.17	gi|298674029|ref|YP_003725779.1|	-	0.009	15.8	1.6	0.03	14.1	1.6	1.9	1	0	0	1	1	1	1	KH	domain
NTPase_1	PF03266.15	gi|298674029|ref|YP_003725779.1|	-	0.0099	15.8	0.0	0.031	14.2	0.0	1.9	1	0	0	1	1	1	1	NTPase
IstB_IS21	PF01695.17	gi|298674029|ref|YP_003725779.1|	-	0.012	15.4	0.0	0.024	14.4	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_29	PF13555.6	gi|298674029|ref|YP_003725779.1|	-	0.013	15.3	0.0	0.037	13.8	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|298674029|ref|YP_003725779.1|	-	0.02	15.3	0.0	0.044	14.2	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_18	PF13238.6	gi|298674029|ref|YP_003725779.1|	-	0.022	15.3	0.0	0.05	14.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|298674029|ref|YP_003725779.1|	-	0.024	13.9	0.0	0.054	12.8	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
NACHT	PF05729.12	gi|298674029|ref|YP_003725779.1|	-	0.024	14.6	0.0	0.047	13.6	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_7	PF12775.7	gi|298674029|ref|YP_003725779.1|	-	0.024	14.1	0.0	0.05	13.1	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_24	PF13479.6	gi|298674029|ref|YP_003725779.1|	-	0.035	13.8	0.1	0.1	12.3	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
AAA	PF00004.29	gi|298674029|ref|YP_003725779.1|	-	0.043	14.2	0.0	0.14	12.6	0.0	1.9	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.6	gi|298674029|ref|YP_003725779.1|	-	0.043	14.0	0.0	0.094	12.9	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|298674029|ref|YP_003725779.1|	-	0.044	13.3	0.0	0.094	12.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|298674029|ref|YP_003725779.1|	-	0.054	13.8	0.0	1.8	8.9	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
PIN_4	PF13638.6	gi|298674029|ref|YP_003725779.1|	-	0.059	13.7	0.0	0.13	12.6	0.0	1.6	1	0	0	1	1	1	0	PIN	domain
TsaE	PF02367.17	gi|298674029|ref|YP_003725779.1|	-	0.074	13.0	0.0	0.26	11.3	0.0	1.9	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_11	PF13086.6	gi|298674029|ref|YP_003725779.1|	-	0.075	12.8	0.0	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.18	gi|298674029|ref|YP_003725779.1|	-	0.13	12.0	0.0	8.4	6.1	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
KTI12	PF08433.10	gi|298674029|ref|YP_003725779.1|	-	0.13	11.7	0.0	0.27	10.6	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
KH_5	PF13184.6	gi|298674029|ref|YP_003725779.1|	-	0.31	11.2	2.8	0.21	11.7	0.3	2.1	2	0	0	2	2	1	0	NusA-like	KH	domain
UDPG_MGDP_dh_N	PF03721.14	gi|298674030|ref|YP_003725780.1|	-	3.3e-67	225.7	0.2	5.6e-67	224.9	0.2	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|298674030|ref|YP_003725780.1|	-	3.5e-37	126.5	0.0	7.4e-37	125.5	0.0	1.6	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.15	gi|298674030|ref|YP_003725780.1|	-	5.9e-30	103.8	0.0	5.9e-28	97.4	0.0	2.4	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|298674030|ref|YP_003725780.1|	-	4.2e-06	26.8	0.0	1.2e-05	25.4	0.0	1.9	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.18	gi|298674030|ref|YP_003725780.1|	-	5.3e-06	26.4	0.0	9.8e-06	25.6	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|298674030|ref|YP_003725780.1|	-	3.2e-05	24.4	0.0	0.0063	17.1	0.0	2.8	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
ApbA	PF02558.16	gi|298674030|ref|YP_003725780.1|	-	0.00027	20.6	0.0	0.00067	19.3	0.0	1.8	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
AlaDh_PNT_C	PF01262.21	gi|298674030|ref|YP_003725780.1|	-	0.00036	19.9	0.4	0.002	17.5	0.3	2.2	2	1	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox	PF00070.27	gi|298674030|ref|YP_003725780.1|	-	0.00054	20.5	0.1	0.0019	18.7	0.1	2.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|298674030|ref|YP_003725780.1|	-	0.00097	18.4	0.0	0.0031	16.8	0.0	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.18	gi|298674030|ref|YP_003725780.1|	-	0.0024	18.1	0.1	0.0055	17.0	0.1	1.6	1	0	0	1	1	1	1	TrkA-N	domain
FAD_binding_3	PF01494.19	gi|298674030|ref|YP_003725780.1|	-	0.0037	16.5	0.1	0.0057	15.9	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_2	PF03446.15	gi|298674030|ref|YP_003725780.1|	-	0.012	15.8	0.0	0.099	12.8	0.0	2.3	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|298674030|ref|YP_003725780.1|	-	0.015	14.6	0.1	0.14	11.5	0.0	2.2	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.22	gi|298674030|ref|YP_003725780.1|	-	0.018	15.9	0.0	0.048	14.5	0.0	1.7	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_8	PF13450.6	gi|298674030|ref|YP_003725780.1|	-	0.029	14.6	2.0	0.037	14.2	0.2	2.2	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
CitF	PF04223.12	gi|298674030|ref|YP_003725780.1|	-	0.042	12.7	0.0	0.063	12.2	0.0	1.2	1	0	0	1	1	1	0	Citrate	lyase,	alpha	subunit	(CitF)
ADH_zinc_N	PF00107.26	gi|298674030|ref|YP_003725780.1|	-	0.12	12.4	0.0	0.3	11.1	0.0	1.7	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
Rossmann-like	PF10727.9	gi|298674030|ref|YP_003725780.1|	-	0.23	11.4	0.1	0.4	10.5	0.1	1.4	1	0	0	1	1	1	0	Rossmann-like	domain
DAO	PF01266.24	gi|298674030|ref|YP_003725780.1|	-	0.26	10.8	0.3	0.5	9.9	0.3	1.4	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
DUF1660	PF07874.11	gi|298674031|ref|YP_003725781.1|	-	0.011	16.2	0.5	0.014	15.8	0.5	1.2	1	0	0	1	1	1	0	Prophage	protein	(DUF1660)
GATase	PF00117.28	gi|298674032|ref|YP_003725782.1|	-	4.3e-22	78.8	0.0	5.3e-22	78.5	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|298674032|ref|YP_003725782.1|	-	7.6e-09	35.7	0.0	0.0001	22.2	0.0	2.0	2	0	0	2	2	2	2	SNO	glutamine	amidotransferase	family
Peptidase_C26	PF07722.13	gi|298674032|ref|YP_003725782.1|	-	3e-07	30.4	0.0	5.3e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	Peptidase	C26
GATase_3	PF07685.14	gi|298674032|ref|YP_003725782.1|	-	1.2e-06	28.2	0.1	9.1e-06	25.4	0.0	1.9	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.24	gi|298674032|ref|YP_003725782.1|	-	0.0031	17.3	0.0	0.0049	16.7	0.0	1.3	1	0	0	1	1	1	1	DJ-1/PfpI	family
LPD18	PF18832.1	gi|298674032|ref|YP_003725782.1|	-	0.0077	16.3	0.0	0.013	15.6	0.0	1.3	1	0	0	1	1	1	1	Large	polyvalent	protein-associated	domain	18
AIRS_C	PF02769.22	gi|298674033|ref|YP_003725783.1|	-	4.3e-17	62.7	1.6	7.1e-17	62.0	1.6	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|298674033|ref|YP_003725783.1|	-	2.2e-08	34.7	1.4	6.9e-08	33.0	1.4	1.8	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
NfeD	PF01957.18	gi|298674034|ref|YP_003725784.1|	-	1.1e-14	54.6	0.5	1.1e-14	54.6	0.5	2.8	3	0	0	3	3	3	1	NfeD-like	C-terminal,	partner-binding
CLP_protease	PF00574.23	gi|298674034|ref|YP_003725784.1|	-	1.8e-07	31.3	0.6	3e-07	30.5	0.6	1.3	1	0	0	1	1	1	1	Clp	protease
TMEM154	PF15102.6	gi|298674034|ref|YP_003725784.1|	-	6.3	6.7	8.6	4.1	7.3	0.5	2.9	3	0	0	3	3	3	0	TMEM154	protein	family
Band_7	PF01145.25	gi|298674035|ref|YP_003725785.1|	-	1.1e-33	116.7	3.9	1.6e-33	116.2	3.9	1.2	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.6	gi|298674035|ref|YP_003725785.1|	-	0.00029	20.6	0.1	0.00053	19.8	0.1	1.4	1	0	0	1	1	1	1	SPFH	domain-Band	7	family
SOP4	PF17081.5	gi|298674035|ref|YP_003725785.1|	-	0.03	13.8	0.0	0.046	13.2	0.0	1.3	1	0	0	1	1	1	0	Suppressor	of	PMA	1-7	protein
DnaJ_CXXCXGXG	PF00684.19	gi|298674036|ref|YP_003725786.1|	-	1.5e-09	38.1	9.9	1.5e-09	38.1	9.9	2.4	1	1	0	2	2	2	1	DnaJ	central	domain
tRNA_anti-codon	PF01336.25	gi|298674036|ref|YP_003725786.1|	-	5.2e-08	32.8	0.1	2.3e-07	30.7	0.1	2.2	3	0	0	3	3	3	1	OB-fold	nucleic	acid	binding	domain
DHH	PF01368.20	gi|298674036|ref|YP_003725786.1|	-	1.8e-06	28.1	0.2	3.9e-06	27.0	0.2	1.5	1	0	0	1	1	1	1	DHH	family
S1	PF00575.23	gi|298674036|ref|YP_003725786.1|	-	2.2e-06	27.9	1.9	2.2e-06	27.9	1.9	2.1	2	0	0	2	2	2	1	S1	RNA	binding	domain
tRNA_anti_2	PF13742.6	gi|298674036|ref|YP_003725786.1|	-	0.04	14.1	0.0	0.11	12.8	0.0	1.8	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
S1_2	PF13509.6	gi|298674036|ref|YP_003725786.1|	-	0.072	13.2	0.1	0.17	12.0	0.1	1.6	1	0	0	1	1	1	0	S1	domain
DUF4854	PF16146.5	gi|298674036|ref|YP_003725786.1|	-	0.084	13.2	0.1	15	6.0	0.0	3.2	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4854)
Arb1	PF09692.10	gi|298674036|ref|YP_003725786.1|	-	0.2	10.8	0.0	0.35	10.0	0.0	1.3	1	0	0	1	1	1	0	Argonaute	siRNA	chaperone	(ARC)	complex	subunit	Arb1
Anti-TRAP	PF15777.5	gi|298674036|ref|YP_003725786.1|	-	0.46	10.5	19.9	0.64	10.0	5.7	3.1	2	2	0	2	2	2	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
Pribosyltran	PF00156.27	gi|298674037|ref|YP_003725787.1|	-	8.9e-20	70.8	0.7	1.4e-19	70.2	0.7	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|298674037|ref|YP_003725787.1|	-	2.1e-05	24.1	0.1	2.7e-05	23.7	0.1	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|298674037|ref|YP_003725787.1|	-	9.7e-05	21.9	0.4	0.0043	16.6	0.3	2.1	1	1	1	2	2	2	1	Phosphoribosyl	transferase
Pribosyl_synth	PF14572.6	gi|298674037|ref|YP_003725787.1|	-	0.00095	19.3	0.8	0.059	13.4	0.3	2.5	1	1	1	2	2	2	1	Phosphoribosyl	synthetase-associated	domain
HTH_11	PF08279.12	gi|298674037|ref|YP_003725787.1|	-	0.0041	17.0	0.4	0.054	13.4	0.1	2.3	2	0	0	2	2	2	1	HTH	domain
HTH_7	PF02796.15	gi|298674037|ref|YP_003725787.1|	-	0.014	15.5	0.0	0.03	14.4	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
GerE	PF00196.19	gi|298674037|ref|YP_003725787.1|	-	0.017	14.7	0.0	0.034	13.7	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4	PF04545.16	gi|298674037|ref|YP_003725787.1|	-	0.058	12.9	0.0	0.14	11.7	0.0	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_Crp_2	PF13545.6	gi|298674037|ref|YP_003725787.1|	-	0.11	12.4	0.1	0.95	9.5	0.0	2.5	2	1	1	3	3	3	0	Crp-like	helix-turn-helix	domain
HTH_23	PF13384.6	gi|298674037|ref|YP_003725787.1|	-	0.16	11.8	0.0	0.32	10.8	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
PIN_6	PF17146.4	gi|298674038|ref|YP_003725788.1|	-	1.4e-11	44.7	0.1	2.4e-11	44.0	0.1	1.4	1	0	0	1	1	1	1	PIN	domain	of	ribonuclease
PIN_4	PF13638.6	gi|298674038|ref|YP_003725788.1|	-	0.0019	18.5	0.2	0.0022	18.3	0.2	1.2	1	0	0	1	1	1	1	PIN	domain
DNA_ligase_ZBD	PF03119.16	gi|298674038|ref|YP_003725788.1|	-	0.011	15.7	0.3	0.029	14.4	0.1	1.8	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
RPE65	PF03055.15	gi|298674039|ref|YP_003725789.1|	-	1.8e-104	350.6	0.1	2e-104	350.4	0.1	1.0	1	0	0	1	1	1	1	Retinal	pigment	epithelial	membrane	protein
NAD_synthase	PF02540.17	gi|298674040|ref|YP_003725790.1|	-	8.4e-85	283.7	0.0	1e-84	283.4	0.0	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|298674040|ref|YP_003725790.1|	-	2.1e-07	30.1	0.0	3e-06	26.3	0.0	2.0	2	0	0	2	2	2	1	tRNA	methyl	transferase
Asn_synthase	PF00733.21	gi|298674040|ref|YP_003725790.1|	-	0.015	15.0	0.0	0.018	14.8	0.0	1.1	1	0	0	1	1	1	0	Asparagine	synthase
CHIPS	PF11434.8	gi|298674040|ref|YP_003725790.1|	-	0.04	13.7	0.1	0.072	12.9	0.1	1.3	1	0	0	1	1	1	0	Chemotaxis-inhibiting	protein	CHIPS
QueC	PF06508.13	gi|298674040|ref|YP_003725790.1|	-	0.13	11.8	0.0	0.28	10.6	0.0	1.5	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.14	gi|298674040|ref|YP_003725790.1|	-	0.14	11.7	0.0	0.23	11.0	0.0	1.3	1	0	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
DUF1743	PF08489.11	gi|298674041|ref|YP_003725791.1|	-	7.5e-41	138.8	0.2	1.6e-40	137.8	0.1	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti_2	PF13742.6	gi|298674041|ref|YP_003725791.1|	-	0.00029	21.0	0.0	0.00065	19.8	0.0	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti-codon	PF01336.25	gi|298674041|ref|YP_003725791.1|	-	0.00054	19.9	0.0	0.001	19.0	0.0	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
OrfB_Zn_ribbon	PF07282.11	gi|298674041|ref|YP_003725791.1|	-	0.029	14.3	1.8	0.086	12.8	1.8	1.7	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
tRNA_anti-like	PF12869.7	gi|298674041|ref|YP_003725791.1|	-	0.042	13.5	0.1	0.1	12.2	0.1	1.6	1	0	0	1	1	1	0	tRNA_anti-like
C1_1	PF00130.22	gi|298674041|ref|YP_003725791.1|	-	0.052	13.5	1.7	0.091	12.7	1.7	1.3	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
YdjO	PF14169.6	gi|298674041|ref|YP_003725791.1|	-	0.061	13.1	0.2	0.15	11.8	0.2	1.6	1	0	0	1	1	1	0	Cold-inducible	protein	YdjO
MatP	PF06303.12	gi|298674041|ref|YP_003725791.1|	-	0.066	13.8	0.4	0.48	11.0	0.0	2.3	2	0	0	2	2	2	0	MatP	N-terminal	domain
DUF4428	PF14471.6	gi|298674041|ref|YP_003725791.1|	-	0.21	11.5	1.7	0.53	10.3	1.7	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
RNA_POL_M_15KD	PF02150.16	gi|298674041|ref|YP_003725791.1|	-	0.43	10.5	2.1	1	9.3	2.1	1.6	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
Zn_Tnp_IS1595	PF12760.7	gi|298674041|ref|YP_003725791.1|	-	0.54	10.3	3.4	1	9.4	3.4	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
HTH_3	PF01381.22	gi|298674042|ref|YP_003725792.1|	-	6.3e-10	39.0	1.5	9.9e-09	35.1	0.1	3.2	4	0	0	4	4	4	1	Helix-turn-helix
HTH_19	PF12844.7	gi|298674042|ref|YP_003725792.1|	-	4.4e-06	26.6	0.7	1.4e-05	25.0	0.0	2.3	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|298674042|ref|YP_003725792.1|	-	8.6e-05	22.8	0.0	0.00015	22.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|298674042|ref|YP_003725792.1|	-	0.0013	18.6	0.1	0.0052	16.7	0.1	2.0	1	0	0	1	1	1	1	HTH	domain
HTH_23	PF13384.6	gi|298674042|ref|YP_003725792.1|	-	0.0062	16.3	0.0	0.012	15.4	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_36	PF13730.6	gi|298674042|ref|YP_003725792.1|	-	0.022	14.7	0.0	0.058	13.3	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
MerR	PF00376.23	gi|298674042|ref|YP_003725792.1|	-	0.024	14.4	0.1	0.077	12.8	0.1	1.9	2	0	0	2	2	2	0	MerR	family	regulatory	protein
HTH_25	PF13413.6	gi|298674042|ref|YP_003725792.1|	-	0.025	14.4	0.1	0.068	13.0	0.0	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_38	PF13936.6	gi|298674042|ref|YP_003725792.1|	-	0.027	14.2	0.3	0.051	13.3	0.3	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|298674042|ref|YP_003725792.1|	-	0.086	12.9	0.1	0.3	11.2	0.1	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
MerR_1	PF13411.6	gi|298674042|ref|YP_003725792.1|	-	0.12	12.5	0.0	0.27	11.3	0.0	1.6	1	0	0	1	1	1	0	MerR	HTH	family	regulatory	protein
Formyl_trans_N	PF00551.19	gi|298674043|ref|YP_003725793.1|	-	2.1e-58	197.0	0.0	2.4e-58	196.9	0.0	1.0	1	0	0	1	1	1	1	Formyl	transferase
SHMT	PF00464.19	gi|298674044|ref|YP_003725794.1|	-	1.1e-171	570.8	1.2	1.3e-171	570.6	1.2	1.0	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
DegT_DnrJ_EryC1	PF01041.17	gi|298674044|ref|YP_003725794.1|	-	0.018	14.3	0.1	0.026	13.8	0.1	1.3	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
THF_DHG_CYH_C	PF02882.19	gi|298674045|ref|YP_003725795.1|	-	5.1e-65	217.7	4.6	6.9e-65	217.2	4.6	1.2	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
THF_DHG_CYH	PF00763.23	gi|298674045|ref|YP_003725795.1|	-	5.2e-37	126.7	0.8	7.7e-37	126.1	0.8	1.3	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	catalytic	domain
AdoHcyase_NAD	PF00670.21	gi|298674045|ref|YP_003725795.1|	-	0.092	12.8	3.1	4.7	7.2	3.1	2.4	1	1	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Semialdhyde_dh	PF01118.24	gi|298674045|ref|YP_003725795.1|	-	0.12	12.8	0.5	2.6	8.5	0.1	2.3	1	1	1	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
Pterin_bind	PF00809.22	gi|298674046|ref|YP_003725796.1|	-	1.4e-53	182.1	0.1	2.2e-53	181.5	0.1	1.3	1	0	0	1	1	1	1	Pterin	binding	enzyme
MTHFR_C	PF12225.8	gi|298674047|ref|YP_003725797.1|	-	2.2e-35	120.2	1.7	2.2e-35	120.2	1.7	1.9	2	1	0	2	2	2	1	Methylene-tetrahydrofolate	reductase	C	terminal
MTHFR	PF02219.17	gi|298674048|ref|YP_003725798.1|	-	1.4e-37	129.6	0.1	1.5e-37	129.5	0.1	1.0	1	0	0	1	1	1	1	Methylenetetrahydrofolate	reductase
Hydrolase_like	PF13242.6	gi|298674048|ref|YP_003725798.1|	-	0.0031	17.5	0.0	0.0058	16.7	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
ThiC_Rad_SAM	PF01964.18	gi|298674049|ref|YP_003725799.1|	-	4.7e-145	483.5	0.2	5.3e-145	483.4	0.2	1.0	1	0	0	1	1	1	1	Radical	SAM	ThiC	family
F420_ligase	PF01996.16	gi|298674050|ref|YP_003725800.1|	-	4.4e-59	199.8	0.2	5.2e-59	199.5	0.2	1.1	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
L_biotic_typeA	PF04604.13	gi|298674050|ref|YP_003725800.1|	-	0.042	13.7	0.2	0.091	12.6	0.2	1.5	1	0	0	1	1	1	0	Type-A	lantibiotic
Thioredoxin	PF00085.20	gi|298674051|ref|YP_003725801.1|	-	1.6e-24	85.9	0.0	1.7e-24	85.8	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_8	PF13905.6	gi|298674051|ref|YP_003725801.1|	-	1.1e-09	38.5	0.0	2e-05	24.8	0.0	2.1	1	1	1	2	2	2	2	Thioredoxin-like
Thioredoxin_2	PF13098.6	gi|298674051|ref|YP_003725801.1|	-	1.4e-09	38.4	0.2	5.8e-09	36.4	0.2	1.7	1	1	0	1	1	1	1	Thioredoxin-like	domain
Glutaredoxin	PF00462.24	gi|298674051|ref|YP_003725801.1|	-	2.8e-06	27.5	0.0	4.3e-06	26.8	0.0	1.4	1	0	0	1	1	1	1	Glutaredoxin
Redoxin	PF08534.10	gi|298674051|ref|YP_003725801.1|	-	7.6e-06	25.7	0.1	0.0045	16.7	0.0	2.1	1	1	0	2	2	2	2	Redoxin
Thioredoxin_3	PF13192.6	gi|298674051|ref|YP_003725801.1|	-	4e-05	23.6	0.1	4.6e-05	23.4	0.1	1.1	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_7	PF13899.6	gi|298674051|ref|YP_003725801.1|	-	0.00021	21.4	0.1	0.00047	20.3	0.1	1.7	1	1	0	1	1	1	1	Thioredoxin-like
AhpC-TSA	PF00578.21	gi|298674051|ref|YP_003725801.1|	-	0.00024	21.0	0.0	0.067	13.1	0.0	2.1	1	1	1	2	2	2	2	AhpC/TSA	family
KaiB	PF07689.12	gi|298674051|ref|YP_003725801.1|	-	0.00073	19.2	0.0	0.00086	19.0	0.0	1.1	1	0	0	1	1	1	1	KaiB	domain
TraF	PF13728.6	gi|298674051|ref|YP_003725801.1|	-	0.00073	19.4	0.0	0.00092	19.1	0.0	1.1	1	0	0	1	1	1	1	F	plasmid	transfer	operon	protein
Thioredoxin_9	PF14595.6	gi|298674051|ref|YP_003725801.1|	-	0.0011	18.8	0.0	0.0013	18.5	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
DUF836	PF05768.14	gi|298674051|ref|YP_003725801.1|	-	0.0072	16.7	0.0	0.0079	16.6	0.0	1.1	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
DSBA	PF01323.20	gi|298674051|ref|YP_003725801.1|	-	0.017	14.9	0.2	0.09	12.5	0.0	1.8	1	1	1	2	2	2	0	DSBA-like	thioredoxin	domain
Thioredoxin_5	PF13743.6	gi|298674051|ref|YP_003725801.1|	-	0.03	14.0	0.2	3	7.5	0.0	2.0	1	1	1	2	2	2	0	Thioredoxin
TrbC_Ftype	PF09673.10	gi|298674051|ref|YP_003725801.1|	-	0.1	12.6	0.0	0.12	12.5	0.0	1.1	1	0	0	1	1	1	0	Type-F	conjugative	transfer	system	pilin	assembly	protein
Lactamase_B_2	PF12706.7	gi|298674052|ref|YP_003725802.1|	-	2.2e-06	27.3	0.5	8.7e-06	25.4	0.1	1.9	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|298674052|ref|YP_003725802.1|	-	0.053	13.4	0.1	0.2	11.5	0.0	2.0	2	1	0	2	2	2	0	Beta-lactamase	superfamily	domain
URO-D	PF01208.17	gi|298674052|ref|YP_003725802.1|	-	0.08	12.1	0.0	0.13	11.4	0.0	1.2	1	0	0	1	1	1	0	Uroporphyrinogen	decarboxylase	(URO-D)
Lactamase_B	PF00753.27	gi|298674052|ref|YP_003725802.1|	-	0.54	10.2	5.6	4.6	7.2	5.6	2.1	1	1	0	1	1	1	0	Metallo-beta-lactamase	superfamily
FUSC_2	PF13515.6	gi|298674053|ref|YP_003725803.1|	-	0.0036	17.4	0.3	0.0055	16.8	0.3	1.2	1	0	0	1	1	1	1	Fusaric	acid	resistance	protein-like
DUF5379	PF17350.2	gi|298674053|ref|YP_003725803.1|	-	0.32	11.3	7.4	0.44	10.8	7.4	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5379)
ABC_tran	PF00005.27	gi|298674054|ref|YP_003725804.1|	-	2.3e-42	144.8	0.0	1.7e-20	73.9	0.0	2.6	2	0	0	2	2	2	2	ABC	transporter
SMC_N	PF02463.19	gi|298674054|ref|YP_003725804.1|	-	2.7e-17	62.9	6.8	1.3e-10	41.1	0.3	3.5	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
RLI	PF04068.15	gi|298674054|ref|YP_003725804.1|	-	8.4e-12	44.7	4.1	1.7e-11	43.8	4.1	1.5	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AAA_21	PF13304.6	gi|298674054|ref|YP_003725804.1|	-	1.7e-09	37.9	6.6	0.04	13.7	0.1	4.2	2	2	1	4	4	4	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
Fer4	PF00037.27	gi|298674054|ref|YP_003725804.1|	-	1.3e-07	31.1	5.1	1.3e-07	31.1	5.1	2.4	3	0	0	3	3	2	1	4Fe-4S	binding	domain
Rad17	PF03215.15	gi|298674054|ref|YP_003725804.1|	-	3.5e-07	30.3	0.1	0.027	14.4	0.0	2.9	2	1	1	3	3	3	2	Rad17	P-loop	domain
RsgA_GTPase	PF03193.16	gi|298674054|ref|YP_003725804.1|	-	5.3e-07	29.7	0.1	0.014	15.3	0.0	2.4	2	0	0	2	2	2	2	RsgA	GTPase
AAA_23	PF13476.6	gi|298674054|ref|YP_003725804.1|	-	1.3e-06	29.1	0.7	0.001	19.6	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|298674054|ref|YP_003725804.1|	-	1.6e-06	28.6	0.3	0.041	14.3	0.0	3.3	2	1	0	2	2	2	2	AAA	ATPase	domain
RNA_helicase	PF00910.22	gi|298674054|ref|YP_003725804.1|	-	3e-05	24.4	0.0	0.5	10.8	0.0	2.6	2	0	0	2	2	2	2	RNA	helicase
AAA_29	PF13555.6	gi|298674054|ref|YP_003725804.1|	-	6e-05	22.7	1.8	0.055	13.2	0.0	2.4	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
Fer4_6	PF12837.7	gi|298674054|ref|YP_003725804.1|	-	6.8e-05	22.8	12.4	7.3e-05	22.7	3.4	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA	PF00004.29	gi|298674054|ref|YP_003725804.1|	-	7.2e-05	23.2	0.0	0.49	10.8	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.6	gi|298674054|ref|YP_003725804.1|	-	0.00015	21.6	1.5	1.2	8.7	0.0	3.4	3	1	0	3	3	3	1	AAA	ATPase	domain
Fer4_21	PF14697.6	gi|298674054|ref|YP_003725804.1|	-	0.00026	21.0	6.5	0.00047	20.2	6.5	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674054|ref|YP_003725804.1|	-	0.0004	20.5	8.4	0.00075	19.6	8.4	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674054|ref|YP_003725804.1|	-	0.0005	20.0	1.6	0.0005	20.0	1.6	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674054|ref|YP_003725804.1|	-	0.00057	20.4	1.4	0.00057	20.4	1.4	2.4	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
AAA_24	PF13479.6	gi|298674054|ref|YP_003725804.1|	-	0.00058	19.6	0.0	0.57	9.9	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
NACHT	PF05729.12	gi|298674054|ref|YP_003725804.1|	-	0.00084	19.3	0.0	0.083	12.8	0.0	2.4	2	0	0	2	2	2	1	NACHT	domain
AAA_22	PF13401.6	gi|298674054|ref|YP_003725804.1|	-	0.0015	18.8	0.0	0.71	10.2	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
Fer4_10	PF13237.6	gi|298674054|ref|YP_003725804.1|	-	0.0028	17.7	10.3	0.0066	16.5	1.4	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
AAA_14	PF13173.6	gi|298674054|ref|YP_003725804.1|	-	0.0032	17.5	1.6	7.4	6.6	0.0	3.6	4	0	0	4	4	3	0	AAA	domain
MMR_HSR1	PF01926.23	gi|298674054|ref|YP_003725804.1|	-	0.0069	16.5	1.1	6.2	6.9	0.4	3.0	3	1	0	3	3	2	0	50S	ribosome-binding	GTPase
AAA_33	PF13671.6	gi|298674054|ref|YP_003725804.1|	-	0.0075	16.4	0.1	1.3	9.2	0.0	3.1	4	0	0	4	4	2	1	AAA	domain
AAA_18	PF13238.6	gi|298674054|ref|YP_003725804.1|	-	0.0092	16.5	0.1	3.8	8.1	0.0	3.3	3	0	0	3	3	3	1	AAA	domain
Fer4_16	PF13484.6	gi|298674054|ref|YP_003725804.1|	-	0.014	16.3	0.7	0.014	16.3	0.7	2.5	2	0	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
DUF87	PF01935.17	gi|298674054|ref|YP_003725804.1|	-	0.015	15.4	1.9	4	7.5	0.0	3.4	3	1	0	3	3	3	0	Helicase	HerA,	central	domain
NB-ARC	PF00931.22	gi|298674054|ref|YP_003725804.1|	-	0.024	13.8	0.0	2	7.5	0.0	2.3	2	0	0	2	2	2	0	NB-ARC	domain
Septin	PF00735.18	gi|298674054|ref|YP_003725804.1|	-	0.04	13.2	0.0	4.4	6.5	0.0	2.2	2	0	0	2	2	2	0	Septin
AAA_5	PF07728.14	gi|298674054|ref|YP_003725804.1|	-	0.052	13.5	0.1	16	5.5	0.0	2.8	3	0	0	3	3	2	0	AAA	domain	(dynein-related	subfamily)
MukB	PF04310.12	gi|298674054|ref|YP_003725804.1|	-	0.077	12.8	0.0	3.3	7.5	0.0	2.6	2	0	0	2	2	2	0	MukB	N-terminal
MeaB	PF03308.16	gi|298674054|ref|YP_003725804.1|	-	0.085	11.8	2.6	3.6	6.5	0.1	2.2	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
VirE	PF05272.11	gi|298674054|ref|YP_003725804.1|	-	0.12	12.1	0.0	8.1	6.1	0.0	2.3	2	0	0	2	2	2	0	Virulence-associated	protein	E
dNK	PF01712.19	gi|298674054|ref|YP_003725804.1|	-	0.15	11.9	0.1	14	5.5	0.0	2.6	2	0	0	2	2	2	0	Deoxynucleoside	kinase
CLP1_P	PF16575.5	gi|298674054|ref|YP_003725804.1|	-	0.15	11.8	0.1	29	4.4	0.0	2.8	3	0	0	3	3	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
ATP_bind_1	PF03029.17	gi|298674054|ref|YP_003725804.1|	-	0.15	11.8	0.1	6.8	6.4	0.0	2.4	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_28	PF13521.6	gi|298674054|ref|YP_003725804.1|	-	0.17	12.2	0.0	8.6	6.6	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
Spore_IV_A	PF09547.10	gi|298674054|ref|YP_003725804.1|	-	0.2	10.5	0.6	1	8.2	0.2	2.0	2	0	0	2	2	2	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
AAA_30	PF13604.6	gi|298674054|ref|YP_003725804.1|	-	0.22	11.2	0.7	17	5.1	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
DUF4277	PF14104.6	gi|298674054|ref|YP_003725804.1|	-	0.23	11.8	1.6	0.8	10.1	0.1	2.4	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF4277)
AAA_25	PF13481.6	gi|298674054|ref|YP_003725804.1|	-	0.27	10.8	1.8	6.9	6.2	0.0	3.2	4	0	0	4	4	4	0	AAA	domain
Fer4_4	PF12800.7	gi|298674054|ref|YP_003725804.1|	-	0.27	11.8	14.0	0.055	14.0	3.3	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
NTPase_1	PF03266.15	gi|298674054|ref|YP_003725804.1|	-	0.34	10.8	4.0	7.3	6.5	0.0	3.0	4	0	0	4	4	2	0	NTPase
Fer4_17	PF13534.6	gi|298674054|ref|YP_003725804.1|	-	7.3	7.2	11.5	88	3.8	11.5	2.3	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Polysacc_synt_3	PF13440.6	gi|298674055|ref|YP_003725805.1|	-	0.003	16.8	0.2	0.0037	16.5	0.2	1.0	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
DUF4870	PF09685.10	gi|298674055|ref|YP_003725805.1|	-	0.028	14.5	2.7	0.029	14.5	2.3	1.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4870)
DUF2614	PF11023.8	gi|298674055|ref|YP_003725805.1|	-	0.045	13.9	0.4	0.047	13.8	0.4	1.1	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
DUF639	PF04842.12	gi|298674055|ref|YP_003725805.1|	-	0.049	13.0	0.2	0.056	12.9	0.2	1.1	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF639)
DUF3742	PF12553.8	gi|298674055|ref|YP_003725805.1|	-	0.083	13.0	0.1	0.087	12.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3742)
EI24	PF07264.11	gi|298674055|ref|YP_003725805.1|	-	0.9	9.8	6.5	2.7	8.2	6.5	1.5	1	1	0	1	1	1	0	Etoposide-induced	protein	2.4	(EI24)
MatE	PF01554.18	gi|298674056|ref|YP_003725806.1|	-	1.4e-51	174.4	38.8	6.1e-27	94.3	17.1	3.1	3	1	1	4	4	4	2	MatE
Polysacc_synt_C	PF14667.6	gi|298674056|ref|YP_003725806.1|	-	5.2e-11	42.8	23.0	2.3e-09	37.5	10.7	5.1	3	2	0	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
TIC20	PF16166.5	gi|298674056|ref|YP_003725806.1|	-	7.9	6.2	10.3	0.46	10.2	2.4	2.5	2	1	1	3	3	3	0	Chloroplast	import	apparatus	Tic20-like
DUF11	PF01345.18	gi|298674058|ref|YP_003725808.1|	-	1.4e-10	41.3	1.9	6.4e-06	26.4	0.0	3.7	3	0	0	3	3	3	2	Domain	of	unknown	function	DUF11
BatD	PF13584.6	gi|298674058|ref|YP_003725808.1|	-	4.7e-07	29.0	15.6	5.8e-05	22.1	0.2	3.3	3	1	1	4	4	4	2	Oxygen	tolerance
Cupredoxin_1	PF13473.6	gi|298674058|ref|YP_003725808.1|	-	0.0001	22.4	4.1	0.047	13.8	0.1	3.6	2	1	1	3	3	3	2	Cupredoxin-like	domain
bMG10	PF17973.1	gi|298674058|ref|YP_003725808.1|	-	0.0016	18.7	1.1	5.9	7.1	0.0	3.8	3	2	0	3	3	3	2	Bacterial	Alpha-2-macroglobulin	MG10	domain
CARDB	PF07705.11	gi|298674058|ref|YP_003725808.1|	-	0.0019	18.4	15.0	0.59	10.4	0.5	3.8	3	0	0	3	3	3	3	CARDB
DUF3127	PF11325.8	gi|298674058|ref|YP_003725808.1|	-	0.022	15.0	7.8	1.9	8.8	0.2	4.4	4	1	1	5	5	5	0	Domain	of	unknown	function	(DUF3127)
CarboxypepD_reg	PF13620.6	gi|298674058|ref|YP_003725808.1|	-	0.023	15.0	0.1	3.8	7.8	0.0	3.6	3	0	0	3	3	3	0	Carboxypeptidase	regulatory-like	domain
Motile_Sperm	PF00635.26	gi|298674058|ref|YP_003725808.1|	-	0.09	12.6	0.0	0.09	12.6	0.0	3.8	5	0	0	5	5	5	0	MSP	(Major	sperm	protein)	domain
SdrD_B	PF17210.3	gi|298674058|ref|YP_003725808.1|	-	0.11	12.7	7.2	0.41	10.9	0.2	3.6	4	0	0	4	4	4	0	SdrD	B-like	domain
Top6b_C	PF18000.1	gi|298674058|ref|YP_003725808.1|	-	0.13	12.4	17.1	0.7	10.1	0.5	5.0	4	3	0	4	4	4	0	Type	2	DNA	topoisomerase	6	subunit	B	C-terminal	domain
MS_channel	PF00924.18	gi|298674059|ref|YP_003725809.1|	-	5.5e-48	163.3	1.1	7.2e-48	162.9	1.1	1.2	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
TM_helix	PF05552.12	gi|298674059|ref|YP_003725809.1|	-	0.00019	21.3	0.2	0.00019	21.3	0.2	2.3	2	1	0	2	2	2	1	Conserved	TM	helix
TssN	PF17555.2	gi|298674059|ref|YP_003725809.1|	-	0.74	9.1	4.0	1.3	8.4	4.0	1.4	1	0	0	1	1	1	0	Type	VI	secretion	system,	TssN
ABC2_membrane_3	PF12698.7	gi|298674059|ref|YP_003725809.1|	-	4.6	6.3	12.0	6.6	5.7	12.0	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Iso_dh	PF00180.20	gi|298674060|ref|YP_003725810.1|	-	3.8e-93	312.4	0.0	4.4e-93	312.2	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
Aconitase_C	PF00694.19	gi|298674061|ref|YP_003725811.1|	-	1e-17	64.7	0.2	2.1e-17	63.7	0.1	1.6	2	1	0	2	2	2	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|298674061|ref|YP_003725811.1|	-	0.0015	18.2	0.2	0.018	14.7	0.2	2.2	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
MFS_1	PF07690.16	gi|298674062|ref|YP_003725812.1|	-	4.5e-57	193.6	82.5	1.6e-47	162.2	47.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|298674062|ref|YP_003725812.1|	-	7e-11	41.6	42.1	1.3e-07	30.8	18.1	3.7	1	1	3	4	4	4	3	Sugar	(and	other)	transporter
MFS_1_like	PF12832.7	gi|298674062|ref|YP_003725812.1|	-	5.1e-05	22.3	35.2	0.019	13.8	13.4	3.5	1	1	1	2	2	2	2	MFS_1	like	family
FAD_binding_2	PF00890.24	gi|298674063|ref|YP_003725813.1|	-	2.1e-15	56.7	0.0	1.7e-06	27.4	0.0	3.1	3	0	0	3	3	3	2	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|298674063|ref|YP_003725813.1|	-	2.4e-14	53.2	0.2	1e-07	31.5	0.0	3.2	3	0	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|298674063|ref|YP_003725813.1|	-	9e-13	48.1	1.6	8.8e-05	21.7	0.0	3.2	3	0	0	3	3	3	3	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.14	gi|298674063|ref|YP_003725813.1|	-	1.3e-09	37.3	0.1	1.6e-06	27.1	0.0	2.4	2	0	0	2	2	2	2	HI0933-like	protein
Thi4	PF01946.17	gi|298674063|ref|YP_003725813.1|	-	1.9e-06	27.3	0.1	3.8e-05	23.0	0.0	2.4	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.27	gi|298674063|ref|YP_003725813.1|	-	2.3e-06	28.1	0.1	0.073	13.6	0.0	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|298674063|ref|YP_003725813.1|	-	7.9e-06	25.7	0.0	0.0055	16.3	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|298674063|ref|YP_003725813.1|	-	8.6e-06	25.9	0.0	7.3e-05	22.9	0.0	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.12	gi|298674063|ref|YP_003725813.1|	-	2.4e-05	23.6	0.0	0.00024	20.3	0.0	2.0	2	0	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_3	PF01494.19	gi|298674063|ref|YP_003725813.1|	-	2.7e-05	23.6	0.0	4.3e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|298674063|ref|YP_003725813.1|	-	9.1e-05	22.0	0.0	0.014	14.8	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.6	gi|298674063|ref|YP_003725813.1|	-	0.00014	21.2	0.1	0.001	18.4	0.0	2.3	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.24	gi|298674063|ref|YP_003725813.1|	-	0.06	12.6	0.0	2.3	7.4	0.0	2.7	3	0	0	3	3	3	0	Flavin	containing	amine	oxidoreductase
Trp_halogenase	PF04820.14	gi|298674063|ref|YP_003725813.1|	-	0.12	11.2	0.1	0.26	10.1	0.0	1.5	2	0	0	2	2	2	0	Tryptophan	halogenase
GDI	PF00996.18	gi|298674063|ref|YP_003725813.1|	-	0.13	10.8	0.3	6	5.3	0.0	2.4	2	1	0	2	2	2	0	GDP	dissociation	inhibitor
DUF1297	PF06973.12	gi|298674064|ref|YP_003725814.1|	-	7.5e-56	188.7	0.0	1.1e-55	188.2	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.12	gi|298674064|ref|YP_003725814.1|	-	1.2e-45	154.4	0.0	2.2e-45	153.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_3	PF02655.14	gi|298674064|ref|YP_003725814.1|	-	6.4e-05	23.1	0.0	0.00031	20.8	0.0	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.11	gi|298674064|ref|YP_003725814.1|	-	0.016	14.8	0.0	0.034	13.7	0.0	1.5	1	0	0	1	1	1	0	RimK-like	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|298674064|ref|YP_003725814.1|	-	0.028	13.9	0.0	0.05	13.1	0.0	1.3	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
PseudoU_synth_1	PF01416.20	gi|298674065|ref|YP_003725815.1|	-	2e-28	99.0	0.0	5e-23	81.6	0.0	2.2	2	0	0	2	2	2	2	tRNA	pseudouridine	synthase
UPF0020	PF01170.18	gi|298674066|ref|YP_003725816.1|	-	4e-24	85.4	0.0	2.4e-23	82.9	0.0	2.0	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
THUMP	PF02926.17	gi|298674066|ref|YP_003725816.1|	-	3.4e-15	56.4	1.5	3.8e-15	56.3	0.7	1.4	2	0	0	2	2	2	1	THUMP	domain
N6_Mtase	PF02384.16	gi|298674066|ref|YP_003725816.1|	-	2.6e-06	26.9	0.0	8.7e-05	21.9	0.0	2.5	2	0	0	2	2	2	1	N-6	DNA	Methylase
Methyltransf_11	PF08241.12	gi|298674066|ref|YP_003725816.1|	-	3.1e-05	24.5	0.1	0.00091	19.8	0.0	2.9	2	1	0	2	2	2	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.18	gi|298674066|ref|YP_003725816.1|	-	4.7e-05	23.2	0.0	0.24	11.1	0.0	2.4	2	1	0	2	2	2	2	DNA	methylase
Methyltransf_25	PF13649.6	gi|298674066|ref|YP_003725816.1|	-	0.00013	22.6	0.0	0.00091	19.9	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298674066|ref|YP_003725816.1|	-	0.00039	20.3	0.1	0.0015	18.4	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
AviRa	PF11599.8	gi|298674066|ref|YP_003725816.1|	-	0.00052	19.6	0.1	0.44	10.0	0.0	2.4	1	1	1	2	2	2	2	RRNA	methyltransferase	AviRa
N6-adenineMlase	PF10237.9	gi|298674066|ref|YP_003725816.1|	-	0.026	14.3	0.0	0.07	12.9	0.0	1.7	2	0	0	2	2	2	0	Probable	N6-adenine	methyltransferase
Cons_hypoth95	PF03602.15	gi|298674066|ref|YP_003725816.1|	-	0.062	12.9	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
DUF1805	PF08827.11	gi|298674067|ref|YP_003725817.1|	-	2.5e-26	91.8	1.2	3.5e-26	91.3	1.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1805)
IMS	PF00817.20	gi|298674067|ref|YP_003725817.1|	-	0.00094	19.2	0.0	0.0012	18.9	0.0	1.1	1	0	0	1	1	1	1	impB/mucB/samB	family
SQHop_cyclase_C	PF13243.6	gi|298674068|ref|YP_003725818.1|	-	0.0003	20.0	6.5	0.03	13.4	1.1	4.0	2	1	1	3	3	3	2	Squalene-hopene	cyclase	C-terminal	domain
TED_complement	PF07678.14	gi|298674068|ref|YP_003725818.1|	-	0.0026	16.8	4.4	0.25	10.3	0.7	3.1	2	1	2	4	4	4	2	A-macroglobulin	TED	domain
HECA	PF15353.6	gi|298674068|ref|YP_003725818.1|	-	0.079	13.2	0.2	0.15	12.3	0.2	1.5	1	0	0	1	1	1	0	Headcase	protein	family	homologue
Sec61_beta	PF03911.16	gi|298674069|ref|YP_003725819.1|	-	1.3e-14	54.0	0.1	1.5e-14	53.7	0.1	1.1	1	0	0	1	1	1	1	Sec61beta	family
OrfB_Zn_ribbon	PF07282.11	gi|298674070|ref|YP_003725820.1|	-	9.1e-25	86.4	0.4	3.3e-24	84.6	0.0	2.2	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298674070|ref|YP_003725820.1|	-	0.00011	22.4	0.7	0.00024	21.3	0.7	1.5	1	0	0	1	1	1	1	Probable	transposase
HypA	PF01155.19	gi|298674070|ref|YP_003725820.1|	-	0.016	15.2	4.3	0.11	12.5	0.6	3.0	3	1	0	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn_ribbon_17	PF17120.5	gi|298674070|ref|YP_003725820.1|	-	0.017	14.7	0.8	0.035	13.7	0.8	1.5	1	0	0	1	1	1	0	Zinc-ribbon,	C4HC2	type
UPF0547	PF10571.9	gi|298674070|ref|YP_003725820.1|	-	0.035	14.2	5.0	0.15	12.2	1.1	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DZR	PF12773.7	gi|298674070|ref|YP_003725820.1|	-	0.35	10.9	2.9	0.4	10.7	1.5	1.9	2	1	0	2	2	2	0	Double	zinc	ribbon
Mu-like_Com	PF10122.9	gi|298674070|ref|YP_003725820.1|	-	1.2	8.7	3.4	9.2	5.8	3.4	2.3	1	1	0	1	1	1	0	Mu-like	prophage	protein	Com
zinc_ribbon_2	PF13240.6	gi|298674070|ref|YP_003725820.1|	-	1.4	8.7	8.3	1.6	8.6	5.5	2.6	2	1	1	3	3	3	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674070|ref|YP_003725820.1|	-	2	8.5	5.2	0.76	9.8	0.6	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|298674070|ref|YP_003725820.1|	-	3.2	7.8	5.1	2.9	7.9	0.2	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
IF-2B	PF01008.17	gi|298674071|ref|YP_003725821.1|	-	1.4e-88	296.8	0.1	1.7e-88	296.5	0.1	1.1	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
Peroxin-22	PF12827.7	gi|298674071|ref|YP_003725821.1|	-	0.017	15.0	0.0	0.13	12.2	0.0	2.2	2	0	0	2	2	2	0	Peroxisomal	biogenesis	protein	family
GCD14	PF08704.10	gi|298674072|ref|YP_003725822.1|	-	6.4e-11	42.4	0.0	4.9e-09	36.2	0.0	2.1	1	1	1	2	2	2	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.6	gi|298674072|ref|YP_003725822.1|	-	1.2e-10	41.4	0.0	1.7e-10	40.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|298674072|ref|YP_003725822.1|	-	1.2e-08	34.4	0.0	1.8e-08	33.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.6	gi|298674072|ref|YP_003725822.1|	-	3.3e-08	34.1	0.0	8.7e-08	32.8	0.0	1.7	2	0	0	2	2	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|298674072|ref|YP_003725822.1|	-	3e-07	30.4	0.0	4e-07	30.0	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_11	PF08241.12	gi|298674072|ref|YP_003725822.1|	-	3.5e-07	30.8	0.0	8.2e-07	29.6	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.13	gi|298674072|ref|YP_003725822.1|	-	2.5e-06	27.1	0.2	3.4e-06	26.7	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_18	PF12847.7	gi|298674072|ref|YP_003725822.1|	-	5.3e-06	26.4	0.1	8.7e-06	25.7	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|298674072|ref|YP_003725822.1|	-	6.9e-06	25.7	0.1	1.2e-05	24.9	0.1	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.18	gi|298674072|ref|YP_003725822.1|	-	4.7e-05	22.8	0.0	6.5e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Cons_hypoth95	PF03602.15	gi|298674072|ref|YP_003725822.1|	-	0.00014	21.6	0.1	0.0017	18.0	0.0	2.1	1	1	1	2	2	2	1	Conserved	hypothetical	protein	95
Methyltransf_23	PF13489.6	gi|298674072|ref|YP_003725822.1|	-	0.00051	19.9	0.0	0.0011	18.8	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
GidB	PF02527.15	gi|298674072|ref|YP_003725822.1|	-	0.00055	19.3	0.0	0.00089	18.6	0.0	1.3	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_12	PF08242.12	gi|298674072|ref|YP_003725822.1|	-	0.001	19.8	0.1	0.0029	18.3	0.1	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.6	gi|298674072|ref|YP_003725822.1|	-	0.0088	17.0	0.0	0.02	15.9	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
DOT1	PF08123.13	gi|298674072|ref|YP_003725822.1|	-	0.011	15.3	0.3	0.12	11.9	0.3	2.1	1	1	0	1	1	1	0	Histone	methylation	protein	DOT1
Methyltr_RsmB-F	PF01189.17	gi|298674072|ref|YP_003725822.1|	-	0.013	15.1	0.0	0.035	13.7	0.0	1.6	1	1	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_15	PF09445.10	gi|298674072|ref|YP_003725822.1|	-	0.019	14.5	0.1	0.032	13.8	0.1	1.3	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_32	PF13679.6	gi|298674072|ref|YP_003725822.1|	-	0.021	14.8	0.0	0.028	14.4	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
CMAS	PF02353.20	gi|298674072|ref|YP_003725822.1|	-	0.03	13.6	0.0	0.044	13.1	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Met_10	PF02475.16	gi|298674072|ref|YP_003725822.1|	-	0.046	13.5	0.1	0.093	12.5	0.1	1.5	1	0	0	1	1	1	0	Met-10+	like-protein
N6_N4_Mtase	PF01555.18	gi|298674072|ref|YP_003725822.1|	-	0.06	13.0	0.0	0.082	12.6	0.0	1.2	1	0	0	1	1	1	0	DNA	methylase
Methyltransf_16	PF10294.9	gi|298674072|ref|YP_003725822.1|	-	0.14	11.9	0.0	0.19	11.5	0.0	1.3	1	0	0	1	1	1	0	Lysine	methyltransferase
Rad51	PF08423.11	gi|298674073|ref|YP_003725823.1|	-	3.7e-36	124.7	0.0	4.3e-36	124.5	0.0	1.0	1	0	0	1	1	1	1	Rad51
RecA	PF00154.21	gi|298674073|ref|YP_003725823.1|	-	3e-12	46.6	0.0	3.6e-12	46.3	0.0	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
ATPase	PF06745.13	gi|298674073|ref|YP_003725823.1|	-	5.2e-11	42.3	0.5	3.4e-10	39.7	0.5	1.9	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|298674073|ref|YP_003725823.1|	-	5.9e-08	32.5	0.0	1.2e-07	31.5	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|298674073|ref|YP_003725823.1|	-	3.7e-07	30.1	0.0	5.6e-07	29.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Zot	PF05707.12	gi|298674073|ref|YP_003725823.1|	-	7.9e-07	28.9	0.0	8.7e-07	28.8	0.0	1.1	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
DnaB_C	PF03796.15	gi|298674073|ref|YP_003725823.1|	-	3.4e-05	23.3	0.0	0.0021	17.5	0.0	2.4	1	1	1	2	2	2	2	DnaB-like	helicase	C	terminal	domain
IstB_IS21	PF01695.17	gi|298674073|ref|YP_003725823.1|	-	0.00031	20.5	0.0	0.00058	19.6	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_31	PF13614.6	gi|298674073|ref|YP_003725823.1|	-	0.00078	19.4	0.0	0.0021	18.0	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
DUF2075	PF09848.9	gi|298674073|ref|YP_003725823.1|	-	0.0013	18.1	0.0	0.0014	17.9	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_18	PF13238.6	gi|298674073|ref|YP_003725823.1|	-	0.0016	19.0	0.0	0.0031	18.1	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.10	gi|298674073|ref|YP_003725823.1|	-	0.0027	17.2	0.0	0.0042	16.6	0.0	1.4	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
SRP54	PF00448.22	gi|298674073|ref|YP_003725823.1|	-	0.0032	17.1	0.0	0.004	16.8	0.0	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
ATPase_2	PF01637.18	gi|298674073|ref|YP_003725823.1|	-	0.0063	16.5	0.2	0.0099	15.8	0.2	1.3	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
KAP_NTPase	PF07693.14	gi|298674073|ref|YP_003725823.1|	-	0.011	15.0	0.0	0.014	14.6	0.0	1.2	1	0	0	1	1	1	0	KAP	family	P-loop	domain
CbiA	PF01656.23	gi|298674073|ref|YP_003725823.1|	-	0.013	15.5	0.0	0.018	15.1	0.0	1.2	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
CLP1_P	PF16575.5	gi|298674073|ref|YP_003725823.1|	-	0.032	14.0	0.0	0.056	13.2	0.0	1.4	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA_22	PF13401.6	gi|298674073|ref|YP_003725823.1|	-	0.04	14.2	0.0	0.08	13.2	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
RVT_1	PF00078.27	gi|298674073|ref|YP_003725823.1|	-	0.04	13.4	0.0	0.052	13.1	0.0	1.2	1	0	0	1	1	1	0	Reverse	transcriptase	(RNA-dependent	DNA	polymerase)
AAA	PF00004.29	gi|298674073|ref|YP_003725823.1|	-	0.045	14.2	0.1	0.085	13.3	0.1	1.5	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
GvpD	PF07088.11	gi|298674073|ref|YP_003725823.1|	-	0.093	11.3	0.0	0.15	10.7	0.0	1.3	1	0	0	1	1	1	0	GvpD	gas	vesicle	protein
PhoH	PF02562.16	gi|298674073|ref|YP_003725823.1|	-	0.12	11.8	0.0	0.21	11.0	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
ABC_tran	PF00005.27	gi|298674073|ref|YP_003725823.1|	-	0.12	12.9	1.0	0.28	11.7	1.0	1.7	1	1	0	1	1	1	0	ABC	transporter
RNA_helicase	PF00910.22	gi|298674073|ref|YP_003725823.1|	-	0.14	12.6	0.0	0.23	11.8	0.0	1.6	1	1	0	1	1	1	0	RNA	helicase
Glutaredoxin	PF00462.24	gi|298674074|ref|YP_003725824.1|	-	6.8e-09	35.8	0.0	8.8e-09	35.5	0.0	1.2	1	0	0	1	1	1	1	Glutaredoxin
DUF836	PF05768.14	gi|298674074|ref|YP_003725824.1|	-	0.00019	21.7	0.1	0.00025	21.4	0.1	1.3	1	1	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
Thioredoxin_3	PF13192.6	gi|298674074|ref|YP_003725824.1|	-	0.029	14.4	0.2	0.044	13.8	0.2	1.4	1	1	0	1	1	1	0	Thioredoxin	domain
GST_N_3	PF13417.6	gi|298674074|ref|YP_003725824.1|	-	0.04	14.3	0.0	0.054	13.9	0.0	1.3	1	1	0	1	1	1	0	Glutathione	S-transferase,	N-terminal	domain
DUF5095	PF17016.5	gi|298674074|ref|YP_003725824.1|	-	0.06	13.0	0.0	0.064	12.9	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5095)
Thioredoxin_2	PF13098.6	gi|298674074|ref|YP_003725824.1|	-	0.072	13.5	0.0	0.074	13.5	0.0	1.2	1	0	0	1	1	1	0	Thioredoxin-like	domain
MSV199	PF10553.9	gi|298674074|ref|YP_003725824.1|	-	0.12	12.6	0.0	0.12	12.6	0.0	1.2	1	0	0	1	1	1	0	MSV199	domain
NRDD	PF13597.6	gi|298674075|ref|YP_003725825.1|	-	2.4e-156	521.8	0.0	2.9e-156	521.5	0.0	1.1	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
Radical_SAM	PF04055.21	gi|298674076|ref|YP_003725826.1|	-	2.7e-18	66.9	0.0	3.8e-18	66.4	0.0	1.1	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|298674076|ref|YP_003725826.1|	-	2.2e-09	37.7	0.0	3.8e-09	36.9	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|298674076|ref|YP_003725826.1|	-	3e-08	33.8	0.0	4.9e-08	33.1	0.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
CoA_binding_2	PF13380.6	gi|298674077|ref|YP_003725827.1|	-	0.00077	19.9	0.0	0.0011	19.5	0.0	1.2	1	0	0	1	1	1	1	CoA	binding	domain
GATase_3	PF07685.14	gi|298674079|ref|YP_003725829.1|	-	1.5e-51	174.8	0.1	2.5e-51	174.1	0.1	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.23	gi|298674079|ref|YP_003725829.1|	-	1e-20	74.1	0.0	1.6e-20	73.4	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.6	gi|298674079|ref|YP_003725829.1|	-	2.4e-18	66.7	0.0	2.4e-17	63.4	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
GATase	PF00117.28	gi|298674079|ref|YP_003725829.1|	-	0.0001	22.1	0.0	0.00021	21.1	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|298674079|ref|YP_003725829.1|	-	0.002	18.0	0.0	0.0047	16.8	0.0	1.5	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
Peptidase_S51	PF03575.17	gi|298674079|ref|YP_003725829.1|	-	0.053	13.2	0.0	0.1	12.2	0.0	1.4	1	0	0	1	1	1	0	Peptidase	family	S51
DUF3799	PF12684.7	gi|298674079|ref|YP_003725829.1|	-	0.2	11.4	0.0	0.34	10.6	0.0	1.3	1	0	0	1	1	1	0	PDDEXK-like	domain	of	unknown	function	(DUF3799)
Methyltransf_31	PF13847.6	gi|298674080|ref|YP_003725830.1|	-	3.5e-11	43.1	0.3	4.4e-11	42.8	0.3	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|298674080|ref|YP_003725830.1|	-	1.7e-10	41.0	0.5	2.3e-10	40.6	0.5	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|298674080|ref|YP_003725830.1|	-	1.8e-09	37.3	0.3	2.5e-09	36.9	0.3	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|298674080|ref|YP_003725830.1|	-	2.3e-08	34.6	0.1	4.2e-08	33.8	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.13	gi|298674080|ref|YP_003725830.1|	-	2.7e-07	30.3	0.6	4.8e-07	29.4	0.2	1.6	1	1	1	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_4	PF02390.17	gi|298674080|ref|YP_003725830.1|	-	1.2e-06	28.1	1.0	4.2e-06	26.3	0.0	1.9	1	1	1	2	2	2	1	Putative	methyltransferase
Methyltransf_12	PF08242.12	gi|298674080|ref|YP_003725830.1|	-	1.8e-06	28.6	0.2	2.5e-06	28.2	0.2	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|298674080|ref|YP_003725830.1|	-	8.7e-06	25.5	0.1	1.2e-05	25.1	0.1	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
PCMT	PF01135.19	gi|298674080|ref|YP_003725830.1|	-	1.4e-05	25.0	0.1	2e-05	24.4	0.1	1.3	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
UPF0020	PF01170.18	gi|298674080|ref|YP_003725830.1|	-	1.8e-05	24.5	0.5	0.00041	20.1	0.5	2.2	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
DOT1	PF08123.13	gi|298674080|ref|YP_003725830.1|	-	3.5e-05	23.4	0.1	5.7e-05	22.7	0.1	1.5	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_11	PF08241.12	gi|298674080|ref|YP_003725830.1|	-	4.4e-05	24.0	0.1	9e-05	23.1	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|298674080|ref|YP_003725830.1|	-	6.3e-05	22.6	0.2	8.2e-05	22.2	0.2	1.3	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_5	PF01795.19	gi|298674080|ref|YP_003725830.1|	-	0.00011	21.8	0.1	0.00015	21.4	0.1	1.1	1	0	0	1	1	1	1	MraW	methylase	family
CMAS	PF02353.20	gi|298674080|ref|YP_003725830.1|	-	0.00017	21.0	0.1	0.00019	20.8	0.1	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Ubie_methyltran	PF01209.18	gi|298674080|ref|YP_003725830.1|	-	0.0002	20.8	0.8	0.00028	20.3	0.3	1.4	1	1	1	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_32	PF13679.6	gi|298674080|ref|YP_003725830.1|	-	0.00071	19.6	0.1	0.00087	19.3	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.19	gi|298674080|ref|YP_003725830.1|	-	0.00094	19.3	0.2	0.0014	18.8	0.2	1.3	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_23	PF13489.6	gi|298674080|ref|YP_003725830.1|	-	0.00096	19.0	0.0	0.0011	18.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.6	gi|298674080|ref|YP_003725830.1|	-	0.0044	18.0	0.0	0.0077	17.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.16	gi|298674080|ref|YP_003725830.1|	-	0.0044	16.8	0.2	0.0056	16.4	0.2	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
GidB	PF02527.15	gi|298674080|ref|YP_003725830.1|	-	0.0044	16.4	0.1	0.0057	16.0	0.1	1.1	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_2	PF00891.18	gi|298674080|ref|YP_003725830.1|	-	0.0056	16.0	0.0	0.0094	15.3	0.0	1.3	1	0	0	1	1	1	1	O-methyltransferase	domain
GATase_3	PF07685.14	gi|298674080|ref|YP_003725830.1|	-	0.0093	15.6	0.0	0.014	15.0	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GCD14	PF08704.10	gi|298674080|ref|YP_003725830.1|	-	0.011	15.4	0.1	0.018	14.7	0.1	1.4	1	1	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
RrnaAD	PF00398.20	gi|298674080|ref|YP_003725830.1|	-	0.02	13.9	0.2	0.98	8.4	0.0	2.0	1	1	1	2	2	2	0	Ribosomal	RNA	adenine	dimethylase
MethyltransfD12	PF02086.15	gi|298674080|ref|YP_003725830.1|	-	0.021	14.5	0.0	0.031	13.9	0.0	1.3	1	0	0	1	1	1	0	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltr_RsmB-F	PF01189.17	gi|298674080|ref|YP_003725830.1|	-	0.029	14.0	0.1	0.062	12.9	0.0	1.5	1	1	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_16	PF10294.9	gi|298674080|ref|YP_003725830.1|	-	0.037	13.8	0.0	0.061	13.1	0.0	1.3	1	1	0	1	1	1	0	Lysine	methyltransferase
TP_methylase	PF00590.20	gi|298674081|ref|YP_003725831.1|	-	3.7e-33	115.3	0.0	6.9e-33	114.4	0.0	1.4	1	1	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
TP_methylase	PF00590.20	gi|298674082|ref|YP_003725832.1|	-	2.7e-46	158.2	0.0	3.1e-46	158.0	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Radical_SAM	PF04055.21	gi|298674082|ref|YP_003725832.1|	-	0.019	15.4	0.1	0.037	14.4	0.1	1.5	1	1	0	1	1	1	0	Radical	SAM	superfamily
Transferase	PF02458.15	gi|298674082|ref|YP_003725832.1|	-	0.046	12.4	0.0	0.055	12.1	0.0	1.2	1	0	0	1	1	1	0	Transferase	family
tRNA_m1G_MT	PF01746.21	gi|298674082|ref|YP_003725832.1|	-	0.17	11.6	0.3	2.7	7.6	0.0	2.2	2	0	0	2	2	2	0	tRNA	(Guanine-1)-methyltransferase
TP_methylase	PF00590.20	gi|298674083|ref|YP_003725833.1|	-	2.9e-37	128.7	0.0	3.5e-37	128.4	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiC	PF02570.15	gi|298674084|ref|YP_003725834.1|	-	1.3e-62	210.9	1.2	1.6e-62	210.7	1.2	1.1	1	0	0	1	1	1	1	Precorrin-8X	methylmutase
PglD_N	PF17836.1	gi|298674084|ref|YP_003725834.1|	-	0.036	14.7	0.1	0.087	13.5	0.1	1.6	1	0	0	1	1	1	0	PglD	N-terminal	domain
DsbD	PF02683.15	gi|298674085|ref|YP_003725835.1|	-	3.8e-32	111.9	24.8	1.4e-31	110.1	24.8	1.7	1	1	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
DsbD_2	PF13386.6	gi|298674085|ref|YP_003725835.1|	-	2.8e-11	43.7	16.9	3.5e-11	43.4	16.9	1.1	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
Thioredoxin	PF00085.20	gi|298674086|ref|YP_003725836.1|	-	1e-14	54.3	0.1	1.4e-14	53.9	0.1	1.3	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_8	PF13905.6	gi|298674086|ref|YP_003725836.1|	-	8e-07	29.3	0.1	1.4e-05	25.3	0.0	2.1	1	1	1	2	2	2	1	Thioredoxin-like
TraF	PF13728.6	gi|298674086|ref|YP_003725836.1|	-	1.3e-05	25.1	0.0	1.8e-05	24.7	0.0	1.2	1	0	0	1	1	1	1	F	plasmid	transfer	operon	protein
DIM1	PF02966.16	gi|298674086|ref|YP_003725836.1|	-	0.00052	19.8	0.2	0.00081	19.2	0.2	1.4	1	1	0	1	1	1	1	Mitosis	protein	DIM1
Thioredoxin_6	PF13848.6	gi|298674086|ref|YP_003725836.1|	-	0.003	17.5	0.0	0.0039	17.1	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like	domain
AhpC-TSA	PF00578.21	gi|298674086|ref|YP_003725836.1|	-	0.0032	17.4	0.0	0.0048	16.8	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|298674086|ref|YP_003725836.1|	-	0.0038	16.9	0.0	0.0049	16.6	0.0	1.2	1	0	0	1	1	1	1	Redoxin
Thioredoxin_3	PF13192.6	gi|298674086|ref|YP_003725836.1|	-	0.004	17.2	0.1	0.01	15.8	0.1	1.7	2	0	0	2	2	2	1	Thioredoxin	domain
Thioredoxin_2	PF13098.6	gi|298674086|ref|YP_003725836.1|	-	0.0069	16.8	0.1	0.014	15.9	0.1	1.6	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_9	PF14595.6	gi|298674086|ref|YP_003725836.1|	-	0.0093	15.7	0.6	0.014	15.2	0.4	1.3	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_7	PF13899.6	gi|298674086|ref|YP_003725836.1|	-	0.045	13.9	0.1	0.089	13.0	0.1	1.5	1	1	0	1	1	1	0	Thioredoxin-like
DUF4969	PF16339.5	gi|298674086|ref|YP_003725836.1|	-	0.068	13.5	1.3	0.64	10.4	0.1	2.5	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF4969)
DUF929	PF06053.11	gi|298674086|ref|YP_003725836.1|	-	0.069	12.5	0.0	0.089	12.1	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF929)
DUF4884	PF16225.5	gi|298674086|ref|YP_003725836.1|	-	0.085	12.9	0.4	0.22	11.6	0.1	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4884)
DUF953	PF06110.11	gi|298674086|ref|YP_003725836.1|	-	0.16	11.6	0.2	0.34	10.5	0.2	1.6	1	1	1	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF953)
RibD_C	PF01872.17	gi|298674087|ref|YP_003725837.1|	-	6.2e-53	179.6	0.0	7e-53	179.4	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
CBS	PF00571.28	gi|298674088|ref|YP_003725838.1|	-	1.8e-41	140.4	13.3	2.2e-12	47.2	1.4	4.3	4	0	0	4	4	4	4	CBS	domain
HTHP	PF11534.8	gi|298674088|ref|YP_003725838.1|	-	0.014	15.8	0.0	4.7	7.7	0.0	2.4	2	0	0	2	2	2	0	Hexameric	tyrosine-coordinated	heme	protein	(HTHP)
Usp	PF00582.26	gi|298674089|ref|YP_003725839.1|	-	2.4e-37	128.6	0.0	2.7e-37	128.4	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Amidohydro_1	PF01979.20	gi|298674090|ref|YP_003725840.1|	-	3.1e-31	109.0	0.0	2.5e-30	106.0	0.0	1.9	1	1	0	1	1	1	1	Amidohydrolase	family
A_deaminase	PF00962.22	gi|298674090|ref|YP_003725840.1|	-	7.2e-10	38.7	0.0	1.2e-09	38.0	0.0	1.4	1	1	0	1	1	1	1	Adenosine/AMP	deaminase
Amidohydro_3	PF07969.11	gi|298674090|ref|YP_003725840.1|	-	6.3e-09	35.8	0.0	1.3e-07	31.5	0.0	2.5	2	1	0	2	2	2	1	Amidohydrolase	family
RuvX	PF03652.15	gi|298674090|ref|YP_003725840.1|	-	0.047	14.1	0.0	0.087	13.2	0.0	1.4	1	0	0	1	1	1	0	Holliday	junction	resolvase
Phage_int_SAM_6	PF18644.1	gi|298674090|ref|YP_003725840.1|	-	0.055	13.5	0.2	1.7	8.7	0.0	2.7	2	1	1	3	3	3	0	Phage	integrase	SAM-like	domain
DUF167	PF02594.16	gi|298674092|ref|YP_003725842.1|	-	2.8e-22	78.6	0.3	3.4e-22	78.3	0.3	1.1	1	0	0	1	1	1	1	Uncharacterised	ACR,	YggU	family	COG1872
F_bP_aldolase	PF01116.20	gi|298674093|ref|YP_003725843.1|	-	1.1e-33	116.9	0.0	1.4e-33	116.6	0.0	1.1	1	0	0	1	1	1	1	Fructose-bisphosphate	aldolase	class-II
Tagatose_6_P_K	PF08013.11	gi|298674093|ref|YP_003725843.1|	-	2.2e-10	39.8	0.0	3.6e-10	39.1	0.0	1.3	1	0	0	1	1	1	1	Tagatose	6	phosphate	kinase
UxaE	PF16257.5	gi|298674093|ref|YP_003725843.1|	-	0.0013	17.5	0.2	0.0059	15.3	0.0	2.0	2	0	0	2	2	2	1	tagaturonate	epimerase
YflT	PF11181.8	gi|298674093|ref|YP_003725843.1|	-	0.25	11.8	2.3	2	9.0	1.0	2.4	2	0	0	2	2	2	0	Heat	induced	stress	protein	YflT
TrmO	PF01980.16	gi|298674094|ref|YP_003725844.1|	-	2.7e-39	134.1	0.0	3.9e-39	133.5	0.0	1.2	1	0	0	1	1	1	1	tRNA-methyltransferase	O
FmdE	PF02663.14	gi|298674095|ref|YP_003725845.1|	-	9.2e-44	148.7	0.1	1.2e-43	148.3	0.1	1.1	1	0	0	1	1	1	1	FmdE,	Molybdenum	formylmethanofuran	dehydrogenase	operon
zf-dskA_traR	PF01258.17	gi|298674095|ref|YP_003725845.1|	-	2.6e-06	27.3	0.9	4.5e-06	26.5	0.9	1.4	1	0	0	1	1	1	1	Prokaryotic	dksA/traR	C4-type	zinc	finger
zinc_ribbon_10	PF10058.9	gi|298674095|ref|YP_003725845.1|	-	0.056	13.2	0.7	0.11	12.2	0.7	1.5	1	0	0	1	1	1	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
ADK_lid	PF05191.14	gi|298674095|ref|YP_003725845.1|	-	0.088	12.8	0.0	0.23	11.5	0.0	1.7	1	0	0	1	1	1	0	Adenylate	kinase,	active	site	lid
DUF4428	PF14471.6	gi|298674095|ref|YP_003725845.1|	-	2.7	8.0	6.8	1.4	8.9	3.7	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
Toprim_4	PF13662.6	gi|298674096|ref|YP_003725846.1|	-	1.6e-05	25.3	0.0	4.3e-05	23.9	0.0	1.8	1	1	0	1	1	1	1	Toprim	domain
Toprim	PF01751.22	gi|298674096|ref|YP_003725846.1|	-	3.3e-05	24.0	0.2	0.00038	20.6	0.2	2.2	1	1	0	1	1	1	1	Toprim	domain
Toprim_2	PF13155.6	gi|298674096|ref|YP_003725846.1|	-	0.032	14.7	0.0	0.057	13.9	0.0	1.5	1	0	0	1	1	1	0	Toprim-like
TBP-binding	PF09247.11	gi|298674096|ref|YP_003725846.1|	-	0.068	13.4	0.9	5.6	7.3	0.1	2.5	2	0	0	2	2	2	0	TATA	box-binding	protein	binding
Toprim_3	PF13362.6	gi|298674096|ref|YP_003725846.1|	-	0.11	12.9	0.0	0.16	12.4	0.0	1.3	1	0	0	1	1	1	0	Toprim	domain
DUF356	PF04009.12	gi|298674097|ref|YP_003725847.1|	-	1.3e-43	147.6	0.4	1.5e-43	147.4	0.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF356)
P5CR_dimer	PF14748.6	gi|298674098|ref|YP_003725848.1|	-	8.5e-40	135.2	0.1	1.3e-39	134.5	0.1	1.3	1	0	0	1	1	1	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.17	gi|298674098|ref|YP_003725848.1|	-	3.5e-21	75.6	0.6	8.2e-21	74.4	0.6	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|298674098|ref|YP_003725848.1|	-	3.2e-08	33.9	0.6	1.2e-07	32.0	0.6	2.0	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
PDH	PF02153.17	gi|298674098|ref|YP_003725848.1|	-	8.4e-05	21.7	0.4	0.00027	20.0	0.4	1.8	1	1	0	1	1	1	1	Prephenate	dehydrogenase
Semialdhyde_dh	PF01118.24	gi|298674098|ref|YP_003725848.1|	-	9.5e-05	22.8	0.1	0.00019	21.9	0.1	1.5	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|298674098|ref|YP_003725848.1|	-	0.00011	22.2	2.0	0.00027	21.0	2.0	1.7	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DapB_N	PF01113.20	gi|298674098|ref|YP_003725848.1|	-	0.0022	18.1	0.2	0.0045	17.1	0.2	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
2-Hacid_dh_C	PF02826.19	gi|298674098|ref|YP_003725848.1|	-	0.0028	17.0	0.1	0.0043	16.4	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
OCD_Mu_crystall	PF02423.15	gi|298674098|ref|YP_003725848.1|	-	0.0047	15.9	0.2	0.0072	15.3	0.2	1.2	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
3HCDH_N	PF02737.18	gi|298674098|ref|YP_003725848.1|	-	0.024	14.5	1.2	3.3	7.6	0.3	2.6	1	1	1	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|298674098|ref|YP_003725848.1|	-	0.043	13.9	1.1	0.098	12.7	1.1	1.6	1	1	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
GFO_IDH_MocA	PF01408.22	gi|298674098|ref|YP_003725848.1|	-	0.059	14.2	0.0	0.12	13.2	0.0	1.5	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
UDPG_MGDP_dh_C	PF03720.15	gi|298674098|ref|YP_003725848.1|	-	0.1	13.1	0.0	0.73	10.3	0.0	2.1	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
HTH_3	PF01381.22	gi|298674099|ref|YP_003725849.1|	-	4.1e-08	33.2	1.4	6.6e-08	32.5	1.4	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|298674099|ref|YP_003725849.1|	-	3.6e-06	26.9	1.4	7.3e-06	25.9	1.4	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|298674099|ref|YP_003725849.1|	-	1.9e-05	24.9	0.0	3.2e-05	24.2	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|298674099|ref|YP_003725849.1|	-	0.0005	19.9	1.4	0.00084	19.2	1.4	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-FCS	PF06467.14	gi|298674099|ref|YP_003725849.1|	-	0.00088	19.2	2.9	0.16	11.9	0.1	2.4	2	0	0	2	2	2	2	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF4509	PF14970.6	gi|298674099|ref|YP_003725849.1|	-	0.078	12.9	0.3	0.1	12.5	0.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4509)
HTH_37	PF13744.6	gi|298674099|ref|YP_003725849.1|	-	0.078	12.9	0.1	0.16	12.0	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2089	PF09862.9	gi|298674099|ref|YP_003725849.1|	-	0.39	10.8	6.1	2	8.4	0.5	2.7	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF2089)
Eaf7	PF07904.13	gi|298674099|ref|YP_003725849.1|	-	0.56	10.6	4.5	0.3	11.5	0.7	2.0	2	0	0	2	2	2	0	Chromatin	modification-related	protein	EAF7
RecR	PF02132.15	gi|298674099|ref|YP_003725849.1|	-	0.93	9.1	4.0	3.8	7.2	0.1	2.6	3	0	0	3	3	3	0	RecR	protein
AAA	PF00004.29	gi|298674100|ref|YP_003725850.1|	-	4.5e-44	150.1	0.2	2.1e-43	147.9	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|298674100|ref|YP_003725850.1|	-	1.3e-13	50.5	0.3	4.2e-13	48.9	0.3	1.9	1	0	0	1	1	1	1	AAA+	lid	domain
Prot_ATP_ID_OB	PF16450.5	gi|298674100|ref|YP_003725850.1|	-	5.1e-10	39.2	0.1	1.1e-09	38.0	0.1	1.6	1	0	0	1	1	1	1	Proteasomal	ATPase	OB	C-terminal	domain
AAA_5	PF07728.14	gi|298674100|ref|YP_003725850.1|	-	5.8e-09	36.1	0.2	1e-07	32.0	0.0	2.8	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_2	PF07724.14	gi|298674100|ref|YP_003725850.1|	-	1e-07	32.2	2.7	3.4e-07	30.5	0.0	2.8	3	1	0	3	3	2	1	AAA	domain	(Cdc48	subfamily)
DUF815	PF05673.13	gi|298674100|ref|YP_003725850.1|	-	2.3e-05	23.7	0.0	5.7e-05	22.4	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_16	PF13191.6	gi|298674100|ref|YP_003725850.1|	-	2.9e-05	24.5	1.2	0.0019	18.6	0.1	2.7	2	1	0	3	3	3	1	AAA	ATPase	domain
AAA_18	PF13238.6	gi|298674100|ref|YP_003725850.1|	-	5.2e-05	23.8	3.3	8e-05	23.2	0.0	2.8	3	1	0	3	3	2	1	AAA	domain
AAA_22	PF13401.6	gi|298674100|ref|YP_003725850.1|	-	0.00025	21.4	0.2	0.011	16.0	0.0	2.5	1	1	1	2	2	2	1	AAA	domain
RuvB_N	PF05496.12	gi|298674100|ref|YP_003725850.1|	-	0.00026	20.8	0.0	0.0008	19.2	0.0	1.8	2	0	0	2	2	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Prot_ATP_OB_N	PF17758.1	gi|298674100|ref|YP_003725850.1|	-	0.0003	20.4	0.1	0.0011	18.6	0.1	2.0	1	0	0	1	1	1	1	Proteasomal	ATPase	OB	N-terminal	domain
TIP49	PF06068.13	gi|298674100|ref|YP_003725850.1|	-	0.00039	19.7	0.8	0.00062	19.1	0.1	1.7	2	0	0	2	2	2	1	TIP49	P-loop	domain
AAA_28	PF13521.6	gi|298674100|ref|YP_003725850.1|	-	0.00061	20.1	0.0	0.0016	18.7	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|298674100|ref|YP_003725850.1|	-	0.0016	18.2	0.0	0.0062	16.3	0.0	2.0	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
ATPase	PF06745.13	gi|298674100|ref|YP_003725850.1|	-	0.0024	17.2	3.1	0.022	14.1	0.0	3.1	2	1	1	3	3	3	1	KaiC
Zeta_toxin	PF06414.12	gi|298674100|ref|YP_003725850.1|	-	0.0025	17.1	0.6	0.0067	15.7	0.0	1.9	2	0	0	2	2	2	1	Zeta	toxin
Mg_chelatase	PF01078.21	gi|298674100|ref|YP_003725850.1|	-	0.0055	16.1	0.1	0.012	15.0	0.1	1.5	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.6	gi|298674100|ref|YP_003725850.1|	-	0.0059	16.8	0.0	0.015	15.4	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_3	PF07726.11	gi|298674100|ref|YP_003725850.1|	-	0.0063	16.4	0.0	0.014	15.3	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.26	gi|298674100|ref|YP_003725850.1|	-	0.0074	16.0	0.0	0.16	11.7	0.0	2.4	2	0	0	2	2	2	1	Sigma-54	interaction	domain
Leu_zip	PF15294.6	gi|298674100|ref|YP_003725850.1|	-	0.0081	15.7	4.5	0.015	14.9	4.5	1.5	1	0	0	1	1	1	1	Leucine	zipper
AAA_11	PF13086.6	gi|298674100|ref|YP_003725850.1|	-	0.0097	15.7	3.1	0.67	9.7	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|298674100|ref|YP_003725850.1|	-	0.017	14.6	0.0	0.044	13.3	0.0	1.6	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_14	PF13173.6	gi|298674100|ref|YP_003725850.1|	-	0.033	14.2	2.2	0.057	13.5	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.15	gi|298674100|ref|YP_003725850.1|	-	0.042	13.7	0.5	0.61	10.0	0.0	2.9	3	0	0	3	3	2	0	NTPase
Spc7	PF08317.11	gi|298674100|ref|YP_003725850.1|	-	0.045	12.6	6.7	0.093	11.6	6.1	1.8	2	0	0	2	2	2	0	Spc7	kinetochore	protein
AAA_24	PF13479.6	gi|298674100|ref|YP_003725850.1|	-	0.065	13.0	0.8	0.24	11.1	0.0	2.4	3	0	0	3	3	2	0	AAA	domain
RNA_helicase	PF00910.22	gi|298674100|ref|YP_003725850.1|	-	0.081	13.3	0.6	0.25	11.7	0.0	2.2	3	0	0	3	3	1	0	RNA	helicase
TsaE	PF02367.17	gi|298674100|ref|YP_003725850.1|	-	0.088	12.8	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_30	PF13604.6	gi|298674100|ref|YP_003725850.1|	-	0.09	12.5	0.3	0.27	10.9	0.3	1.9	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|298674100|ref|YP_003725850.1|	-	0.12	12.2	0.2	1.3	8.9	0.1	2.2	1	1	1	2	2	2	0	NACHT	domain
AAA_25	PF13481.6	gi|298674100|ref|YP_003725850.1|	-	0.14	11.8	3.7	0.34	10.5	0.3	2.8	2	1	0	3	3	3	0	AAA	domain
AAA_19	PF13245.6	gi|298674100|ref|YP_003725850.1|	-	0.16	12.3	0.3	0.51	10.7	0.3	1.8	1	1	0	1	1	1	0	AAA	domain
DnaB_C	PF03796.15	gi|298674100|ref|YP_003725850.1|	-	0.23	10.8	5.0	5.3	6.3	0.0	3.7	3	1	1	4	4	4	0	DnaB-like	helicase	C	terminal	domain
ABC_tran	PF00005.27	gi|298674100|ref|YP_003725850.1|	-	0.63	10.6	2.5	1.6	9.3	0.0	2.6	2	1	0	2	2	2	0	ABC	transporter
AAA_21	PF13304.6	gi|298674100|ref|YP_003725850.1|	-	1.2	8.9	5.6	5.4	6.7	2.6	3.0	2	1	0	3	3	3	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
V_ATPase_I	PF01496.19	gi|298674100|ref|YP_003725850.1|	-	2.2	6.1	7.7	3	5.6	7.7	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF2551	PF10826.8	gi|298674101|ref|YP_003725851.1|	-	2.8e-32	110.8	1.5	4e-32	110.3	1.5	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2551)
DnaJ_CXXCXGXG	PF00684.19	gi|298674102|ref|YP_003725852.1|	-	4.9e-07	30.0	19.9	8.9e-06	26.0	10.5	2.1	1	1	1	2	2	2	2	DnaJ	central	domain
DUF5351	PF17302.2	gi|298674102|ref|YP_003725852.1|	-	0.0063	16.7	12.4	0.77	10.0	0.7	4.0	4	0	0	4	4	4	2	Family	of	unknown	function	(DUF5351)
Anti-TRAP	PF15777.5	gi|298674102|ref|YP_003725852.1|	-	0.017	15.1	13.6	0.037	14.0	2.3	2.7	1	1	2	3	3	3	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
DUF99	PF01949.16	gi|298674104|ref|YP_003725854.1|	-	2.8e-64	215.9	0.0	3.2e-64	215.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Endonuclease_5	PF04493.14	gi|298674104|ref|YP_003725854.1|	-	0.0057	16.4	0.0	0.0082	15.8	0.0	1.3	1	0	0	1	1	1	1	Endonuclease	V
PGM_PMM_I	PF02878.16	gi|298674105|ref|YP_003725855.1|	-	4.8e-42	142.9	1.0	6.9e-42	142.4	0.2	1.7	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|298674105|ref|YP_003725855.1|	-	1e-27	96.7	0.0	2.4e-27	95.6	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|298674105|ref|YP_003725855.1|	-	6.4e-26	90.8	0.0	1.2e-25	89.9	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|298674105|ref|YP_003725855.1|	-	4.3e-14	52.5	0.0	1.4e-13	50.8	0.0	1.9	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
GidB	PF02527.15	gi|298674105|ref|YP_003725855.1|	-	0.016	14.5	0.0	0.029	13.7	0.0	1.4	1	0	0	1	1	1	0	rRNA	small	subunit	methyltransferase	G
Methyltransf_29	PF03141.16	gi|298674105|ref|YP_003725855.1|	-	0.066	11.8	0.2	0.25	9.8	0.0	1.9	2	0	0	2	2	2	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
Acetyltransf_7	PF13508.7	gi|298674106|ref|YP_003725856.1|	-	4.8e-11	42.9	0.0	6.1e-11	42.6	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|298674106|ref|YP_003725856.1|	-	4.2e-10	39.9	0.0	5.2e-10	39.6	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|298674106|ref|YP_003725856.1|	-	4.5e-10	39.6	0.1	6e-10	39.2	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|298674106|ref|YP_003725856.1|	-	4.2e-06	26.9	0.0	0.00036	20.6	0.0	2.1	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|298674106|ref|YP_003725856.1|	-	0.00016	21.6	0.0	0.00025	20.9	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_CG	PF14542.6	gi|298674106|ref|YP_003725856.1|	-	0.0011	19.0	0.0	0.0024	17.9	0.0	1.5	1	1	0	1	1	1	1	GCN5-related	N-acetyl-transferase
NT5C	PF06941.12	gi|298674106|ref|YP_003725856.1|	-	0.029	14.3	0.0	0.04	13.8	0.0	1.3	1	0	0	1	1	1	0	5'	nucleotidase,	deoxy	(Pyrimidine),	cytosolic	type	C	protein	(NT5C)
Acetyltransf_15	PF17013.5	gi|298674106|ref|YP_003725856.1|	-	0.065	12.7	0.0	0.077	12.4	0.0	1.3	1	0	0	1	1	1	0	Putative	acetyl-transferase
Choline_kinase	PF01633.20	gi|298674106|ref|YP_003725856.1|	-	0.11	12.1	0.0	0.13	11.8	0.0	1.0	1	0	0	1	1	1	0	Choline/ethanolamine	kinase
Acetyltransf_13	PF13880.6	gi|298674106|ref|YP_003725856.1|	-	0.11	12.5	0.1	0.36	10.8	0.0	1.8	2	0	0	2	2	2	0	ESCO1/2	acetyl-transferase
DUF166	PF02593.14	gi|298674107|ref|YP_003725857.1|	-	2.2e-75	253.0	0.0	2.5e-75	252.8	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function
zf-B_box	PF00643.24	gi|298674107|ref|YP_003725857.1|	-	0.0033	17.5	1.2	0.0064	16.6	1.2	1.4	1	0	0	1	1	1	1	B-box	zinc	finger
FYVE	PF01363.21	gi|298674107|ref|YP_003725857.1|	-	0.041	14.0	0.0	0.076	13.2	0.0	1.4	1	0	0	1	1	1	0	FYVE	zinc	finger
DUF1400	PF07176.11	gi|298674108|ref|YP_003725858.1|	-	0.014	15.7	0.0	0.016	15.5	0.0	1.1	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF1400)
Nuc_deoxyrib_tr	PF05014.15	gi|298674109|ref|YP_003725859.1|	-	8.9e-27	93.7	0.0	1e-26	93.5	0.0	1.1	1	0	0	1	1	1	1	Nucleoside	2-deoxyribosyltransferase
Nuc_deoxyri_tr2	PF15891.5	gi|298674109|ref|YP_003725859.1|	-	1.8e-19	70.0	0.0	2.7e-19	69.5	0.0	1.2	1	0	0	1	1	1	1	Nucleoside	2-deoxyribosyltransferase	like
LDcluster4	PF18306.1	gi|298674109|ref|YP_003725859.1|	-	0.039	13.5	0.0	0.058	13.0	0.0	1.3	1	1	0	1	1	1	0	SLOG	cluster4	family
DUF4406	PF14359.6	gi|298674109|ref|YP_003725859.1|	-	0.077	13.5	0.0	0.12	12.9	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4406)
Pyr_redox_2	PF07992.14	gi|298674110|ref|YP_003725860.1|	-	1.5e-45	155.7	0.0	2.7e-45	154.9	0.0	1.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|298674110|ref|YP_003725860.1|	-	1.5e-21	76.7	0.2	3.1e-21	75.7	0.2	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.27	gi|298674110|ref|YP_003725860.1|	-	7.7e-15	55.2	0.0	2e-14	53.9	0.0	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|298674110|ref|YP_003725860.1|	-	4.2e-10	39.4	0.0	7.4e-10	38.6	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.6	gi|298674110|ref|YP_003725860.1|	-	2.9e-07	29.9	0.1	0.00072	18.8	0.0	2.8	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
3HCDH_N	PF02737.18	gi|298674110|ref|YP_003725860.1|	-	0.0053	16.7	0.0	0.023	14.6	0.0	2.0	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|298674110|ref|YP_003725860.1|	-	0.054	13.1	0.1	0.3	10.7	0.0	2.3	3	0	0	3	3	3	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Thi4	PF01946.17	gi|298674110|ref|YP_003725860.1|	-	0.061	12.6	0.0	0.12	11.6	0.0	1.5	1	0	0	1	1	1	0	Thi4	family
ArsP_1	PF03773.13	gi|298674111|ref|YP_003725861.1|	-	4.2e-62	209.9	18.5	4.9e-62	209.7	18.5	1.0	1	0	0	1	1	1	1	Predicted	permease
Hydantoinase_A	PF01968.18	gi|298674112|ref|YP_003725862.1|	-	3.4e-32	111.9	0.7	2.1e-31	109.3	0.0	2.3	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.13	gi|298674112|ref|YP_003725862.1|	-	1.2e-31	109.8	4.4	3.1e-28	98.7	1.4	3.6	2	1	0	2	2	2	2	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.6	gi|298674112|ref|YP_003725862.1|	-	2.4e-05	23.1	0.8	0.13	10.8	0.1	2.3	2	0	0	2	2	2	2	MutL	protein
BcrAD_BadFG	PF01869.20	gi|298674112|ref|YP_003725862.1|	-	0.0035	16.9	0.3	0.55	9.7	0.1	2.3	2	0	0	2	2	2	2	BadF/BadG/BcrA/BcrD	ATPase	family
FtsA	PF14450.6	gi|298674112|ref|YP_003725862.1|	-	0.0055	17.1	1.2	0.63	10.5	0.1	2.9	3	0	0	3	3	3	1	Cell	division	protein	FtsA
DegT_DnrJ_EryC1	PF01041.17	gi|298674113|ref|YP_003725863.1|	-	1.2e-92	311.0	0.0	1.4e-92	310.8	0.0	1.0	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.21	gi|298674113|ref|YP_003725863.1|	-	4e-08	32.8	0.0	6.3e-08	32.2	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|298674113|ref|YP_003725863.1|	-	4.2e-06	26.0	0.1	8.5e-06	24.9	0.0	1.4	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|298674113|ref|YP_003725863.1|	-	0.00013	20.7	0.0	0.0002	20.0	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|298674113|ref|YP_003725863.1|	-	0.00024	20.5	0.0	0.00056	19.3	0.0	1.6	1	1	0	1	1	1	1	Beta-eliminating	lyase
SHMT	PF00464.19	gi|298674113|ref|YP_003725863.1|	-	0.011	14.3	0.0	0.016	13.8	0.0	1.2	1	0	0	1	1	1	0	Serine	hydroxymethyltransferase
DUF2913	PF11140.8	gi|298674113|ref|YP_003725863.1|	-	0.087	12.6	0.0	1	9.1	0.0	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2913)
Glyco_hydro_15	PF00723.21	gi|298674114|ref|YP_003725864.1|	-	0.0046	15.8	0.3	0.022	13.6	0.6	2.1	2	1	0	2	2	2	1	Glycosyl	hydrolases	family	15
Hydrolase_3	PF08282.12	gi|298674116|ref|YP_003725866.1|	-	6.8e-17	62.0	0.2	1.2e-16	61.3	0.2	1.4	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.13	gi|298674116|ref|YP_003725866.1|	-	1.6e-06	27.8	0.0	0.0014	18.2	0.0	2.2	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase_6	PF13344.6	gi|298674116|ref|YP_003725866.1|	-	2e-05	24.6	0.0	4e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|298674116|ref|YP_003725866.1|	-	0.00011	22.7	2.5	0.14	12.5	0.0	3.2	2	1	1	3	3	3	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|298674116|ref|YP_003725866.1|	-	0.0011	19.1	1.2	0.047	13.8	0.0	3.1	2	2	1	3	3	3	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|298674116|ref|YP_003725866.1|	-	0.013	15.8	0.2	1.7	8.9	0.2	2.9	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
DUF2812	PF11193.8	gi|298674116|ref|YP_003725866.1|	-	0.17	12.1	0.8	0.29	11.3	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2812)
MS_channel	PF00924.18	gi|298674117|ref|YP_003725867.1|	-	2.2e-40	138.4	2.2	3.7e-40	137.7	2.2	1.3	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
DUF3043	PF11241.8	gi|298674117|ref|YP_003725867.1|	-	0.43	10.6	2.7	0.28	11.2	0.5	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3043)
Phage_integrase	PF00589.22	gi|298674118|ref|YP_003725868.1|	-	1e-24	87.3	0.8	2e-24	86.3	0.1	1.8	3	0	0	3	3	3	1	Phage	integrase	family
zinc_ribbon_2	PF13240.6	gi|298674118|ref|YP_003725868.1|	-	3.1e-07	29.9	3.1	7.8e-07	28.6	3.1	1.7	1	0	0	1	1	1	1	zinc-ribbon	domain
Phage_int_SAM_1	PF02899.17	gi|298674118|ref|YP_003725868.1|	-	3.3e-07	30.5	0.0	8.5e-07	29.2	0.0	1.7	1	0	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.6	gi|298674118|ref|YP_003725868.1|	-	2.7e-06	27.7	0.0	9.4e-05	22.8	0.0	2.6	1	1	1	2	2	2	2	Phage	integrase,	N-terminal	SAM-like	domain
DZR	PF12773.7	gi|298674118|ref|YP_003725868.1|	-	5e-05	23.2	0.5	0.00012	22.0	0.5	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|298674118|ref|YP_003725868.1|	-	0.00035	19.9	1.7	0.00069	18.9	1.7	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.18	gi|298674118|ref|YP_003725868.1|	-	0.0053	16.0	2.7	0.0091	15.3	2.7	1.4	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
zinc_ribbon_15	PF17032.5	gi|298674118|ref|YP_003725868.1|	-	0.0054	17.4	0.7	0.013	16.2	0.7	1.7	1	0	0	1	1	1	1	zinc-ribbon	family
zf-NADH-PPase	PF09297.11	gi|298674118|ref|YP_003725868.1|	-	0.0065	16.1	0.5	0.29	10.8	0.1	2.4	2	0	0	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
Nudix_N_2	PF14803.6	gi|298674118|ref|YP_003725868.1|	-	0.011	15.6	0.7	3	7.8	0.0	2.6	2	0	0	2	2	2	0	Nudix	N-terminal
DUF4248	PF14053.6	gi|298674118|ref|YP_003725868.1|	-	0.17	11.9	0.2	1.1	9.3	0.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4248)
RecR	PF02132.15	gi|298674118|ref|YP_003725868.1|	-	0.24	11.0	1.2	0.59	9.8	1.2	1.7	1	0	0	1	1	1	0	RecR	protein
NOB1_Zn_bind	PF08772.11	gi|298674118|ref|YP_003725868.1|	-	1.7	8.9	4.2	33	4.7	3.8	2.5	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Cytokin-bind	PF09265.10	gi|298674119|ref|YP_003725869.1|	-	0.072	12.5	0.8	0.077	12.4	0.8	1.1	1	0	0	1	1	1	0	Cytokinin	dehydrogenase	1,	FAD	and	cytokinin	binding
Maf1	PF09174.10	gi|298674120|ref|YP_003725870.1|	-	0.039	14.1	0.7	0.046	13.9	0.7	1.2	1	0	0	1	1	1	0	Maf1	regulator
AAA_12	PF13087.6	gi|298674122|ref|YP_003725872.1|	-	2.5e-20	73.0	0.6	4.9e-20	72.0	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_11	PF13086.6	gi|298674122|ref|YP_003725872.1|	-	7.5e-20	71.8	0.0	2.1e-10	40.8	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
AAA_30	PF13604.6	gi|298674122|ref|YP_003725872.1|	-	1.2e-12	47.9	0.0	2.2e-12	47.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.6	gi|298674122|ref|YP_003725872.1|	-	3.2e-11	43.8	0.0	6.7e-11	42.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
PhoH	PF02562.16	gi|298674122|ref|YP_003725872.1|	-	1e-05	25.1	0.0	0.0074	15.8	0.0	2.5	2	0	0	2	2	2	2	PhoH-like	protein
Helicase_RecD	PF05127.14	gi|298674122|ref|YP_003725872.1|	-	0.00013	21.9	0.0	0.00078	19.3	0.0	2.4	2	0	0	2	2	2	1	Helicase
UvrD-helicase	PF00580.21	gi|298674122|ref|YP_003725872.1|	-	0.00023	20.8	0.1	0.0017	18.0	0.0	2.3	2	1	0	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
DEAD	PF00270.29	gi|298674122|ref|YP_003725872.1|	-	0.00034	20.4	0.0	0.00073	19.4	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
UvrD_C_2	PF13538.6	gi|298674122|ref|YP_003725872.1|	-	0.00038	20.2	0.0	0.00088	19.1	0.0	1.7	1	0	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
Viral_helicase1	PF01443.18	gi|298674122|ref|YP_003725872.1|	-	0.0011	18.8	0.4	0.95	9.1	0.0	4.1	4	0	0	4	4	4	1	Viral	(Superfamily	1)	RNA	helicase
AAA_25	PF13481.6	gi|298674122|ref|YP_003725872.1|	-	0.0036	16.9	0.0	0.015	14.9	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|298674122|ref|YP_003725872.1|	-	0.0064	16.9	0.0	0.034	14.6	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2075	PF09848.9	gi|298674122|ref|YP_003725872.1|	-	0.021	14.1	0.1	1.2	8.2	0.0	2.7	2	1	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_22	PF13401.6	gi|298674122|ref|YP_003725872.1|	-	0.023	15.0	0.0	0.084	13.1	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
ResIII	PF04851.15	gi|298674122|ref|YP_003725872.1|	-	0.026	14.5	0.0	0.079	13.0	0.0	1.8	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_24	PF13479.6	gi|298674122|ref|YP_003725872.1|	-	0.032	14.0	0.2	0.16	11.7	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|298674122|ref|YP_003725872.1|	-	0.039	13.9	0.0	0.31	10.9	0.0	2.5	3	0	0	3	3	2	0	NACHT	domain
AAA_7	PF12775.7	gi|298674122|ref|YP_003725872.1|	-	0.074	12.6	0.1	0.16	11.5	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
PIF1	PF05970.14	gi|298674122|ref|YP_003725872.1|	-	0.14	11.3	0.7	1.9	7.6	0.3	2.6	2	1	0	2	2	2	0	PIF1-like	helicase
Tnp_zf-ribbon_2	PF13842.6	gi|298674123|ref|YP_003725873.1|	-	0.007	17.1	4.5	0.016	16.0	4.5	1.6	1	0	0	1	1	1	1	DDE_Tnp_1-like	zinc-ribbon
TSNAXIP1_N	PF15739.5	gi|298674123|ref|YP_003725873.1|	-	0.16	12.3	2.4	0.85	10.0	0.6	2.3	1	1	1	2	2	2	0	Translin-associated	factor	X-interacting	N-terminus
AAA	PF00004.29	gi|298674124|ref|YP_003725874.1|	-	7.6e-21	74.9	0.0	1.3e-20	74.1	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.14	gi|298674124|ref|YP_003725874.1|	-	1.5e-05	25.0	0.0	3.2e-05	23.9	0.0	1.7	2	1	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|298674124|ref|YP_003725874.1|	-	0.00018	22.0	0.0	0.00085	19.7	0.0	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF815	PF05673.13	gi|298674124|ref|YP_003725874.1|	-	0.00022	20.4	0.0	0.0016	17.7	0.0	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_14	PF13173.6	gi|298674124|ref|YP_003725874.1|	-	0.00025	21.1	0.0	0.00042	20.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|298674124|ref|YP_003725874.1|	-	0.00035	20.6	0.3	0.074	12.9	0.3	2.2	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_19	PF13245.6	gi|298674124|ref|YP_003725874.1|	-	0.00085	19.7	0.0	0.0017	18.7	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.15	gi|298674124|ref|YP_003725874.1|	-	0.0013	18.7	0.0	0.0022	17.9	0.0	1.4	1	0	0	1	1	1	1	NTPase
AAA_18	PF13238.6	gi|298674124|ref|YP_003725874.1|	-	0.0014	19.2	0.0	0.0025	18.3	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_11	PF13086.6	gi|298674124|ref|YP_003725874.1|	-	0.0015	18.4	0.1	0.0034	17.2	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_6	PF12774.7	gi|298674124|ref|YP_003725874.1|	-	0.0039	16.2	0.0	0.0084	15.1	0.0	1.5	1	0	0	1	1	1	1	Hydrolytic	ATP	binding	site	of	dynein	motor	region
AAA_22	PF13401.6	gi|298674124|ref|YP_003725874.1|	-	0.0054	17.0	0.0	0.018	15.3	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_7	PF12775.7	gi|298674124|ref|YP_003725874.1|	-	0.0067	16.0	0.0	0.011	15.2	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
AAA_2	PF07724.14	gi|298674124|ref|YP_003725874.1|	-	0.012	15.7	0.0	0.11	12.6	0.0	2.3	1	1	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.12	gi|298674124|ref|YP_003725874.1|	-	0.017	14.9	0.0	0.033	14.0	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_30	PF13604.6	gi|298674124|ref|YP_003725874.1|	-	0.024	14.4	0.0	0.036	13.8	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|298674124|ref|YP_003725874.1|	-	0.03	14.7	0.0	0.12	12.8	0.0	2.0	2	1	0	2	2	2	0	RNA	helicase
AAA_17	PF13207.6	gi|298674124|ref|YP_003725874.1|	-	0.053	13.9	0.1	0.56	10.6	0.0	2.5	2	1	0	3	3	3	0	AAA	domain
ABC_tran	PF00005.27	gi|298674124|ref|YP_003725874.1|	-	0.055	14.0	0.0	0.099	13.2	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
AAA_33	PF13671.6	gi|298674124|ref|YP_003725874.1|	-	0.062	13.5	0.0	0.12	12.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
ResIII	PF04851.15	gi|298674124|ref|YP_003725874.1|	-	0.11	12.5	0.0	0.17	11.9	0.0	1.4	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_28	PF13521.6	gi|298674124|ref|YP_003725874.1|	-	0.14	12.3	0.0	0.2	11.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|298674124|ref|YP_003725874.1|	-	0.19	11.7	0.1	0.93	9.4	0.1	2.0	1	1	0	1	1	1	0	NACHT	domain
Zeta_toxin	PF06414.12	gi|298674124|ref|YP_003725874.1|	-	0.2	10.9	0.0	0.36	10.1	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
Trans_reg_C	PF00486.28	gi|298674125|ref|YP_003725875.1|	-	0.0076	16.3	0.0	6.4	6.9	0.0	2.6	2	0	0	2	2	2	2	Transcriptional	regulatory	protein,	C	terminal
HEPN_AbiU2	PF18734.1	gi|298674125|ref|YP_003725875.1|	-	0.017	14.6	0.2	0.62	9.5	0.0	2.3	2	0	0	2	2	2	0	AbiU2
DNA_pol3_delta	PF06144.13	gi|298674125|ref|YP_003725875.1|	-	0.046	13.5	0.0	1.2	8.8	0.0	2.8	3	0	0	3	3	3	0	DNA	polymerase	III,	delta	subunit
Ebp2	PF05890.12	gi|298674125|ref|YP_003725875.1|	-	0.14	11.7	0.2	13	5.2	0.1	2.1	2	0	0	2	2	2	0	Eukaryotic	rRNA	processing	protein	EBP2
BRCT_assoc	PF12820.7	gi|298674125|ref|YP_003725875.1|	-	0.75	9.6	2.9	4.9	7.0	0.1	2.2	2	0	0	2	2	2	0	Serine-rich	domain	associated	with	BRCT
Filament	PF00038.21	gi|298674126|ref|YP_003725876.1|	-	0.00026	20.7	59.3	0.0061	16.2	16.1	3.7	1	1	3	4	4	4	3	Intermediate	filament	protein
Fez1	PF06818.15	gi|298674126|ref|YP_003725876.1|	-	0.00028	21.4	19.2	0.00028	21.4	19.2	3.2	1	1	1	2	2	1	1	Fez1
BRE1	PF08647.11	gi|298674126|ref|YP_003725876.1|	-	0.00033	20.7	21.2	0.00033	20.7	21.2	5.4	2	2	3	5	5	4	1	BRE1	E3	ubiquitin	ligase
Macoilin	PF09726.9	gi|298674126|ref|YP_003725876.1|	-	0.0013	17.4	21.7	0.0013	17.4	21.7	2.1	1	1	1	2	2	2	1	Macoilin	family
TMF_TATA_bd	PF12325.8	gi|298674126|ref|YP_003725876.1|	-	0.0016	18.6	19.0	0.0016	18.6	19.0	4.0	1	1	3	4	4	4	1	TATA	element	modulatory	factor	1	TATA	binding
AAA_13	PF13166.6	gi|298674126|ref|YP_003725876.1|	-	0.0039	15.9	59.5	0.0055	15.4	17.8	2.9	3	0	0	3	3	3	2	AAA	domain
Laminin_II	PF06009.12	gi|298674126|ref|YP_003725876.1|	-	0.0083	16.2	50.5	0.04	13.9	9.6	4.2	1	1	3	4	4	4	2	Laminin	Domain	II
ATG16	PF08614.11	gi|298674126|ref|YP_003725876.1|	-	0.021	15.1	51.7	0.13	12.4	21.2	3.1	2	1	1	3	3	3	0	Autophagy	protein	16	(ATG16)
DUF1664	PF07889.12	gi|298674126|ref|YP_003725876.1|	-	0.084	12.9	41.1	1.3	9.1	5.7	5.0	2	2	3	5	5	5	0	Protein	of	unknown	function	(DUF1664)
Spc7	PF08317.11	gi|298674126|ref|YP_003725876.1|	-	0.12	11.3	64.2	0.13	11.2	25.0	3.5	1	1	2	3	3	3	0	Spc7	kinetochore	protein
HIP1_clath_bdg	PF16515.5	gi|298674126|ref|YP_003725876.1|	-	0.13	12.9	49.9	1.1	10.0	16.6	4.8	3	2	2	5	5	5	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
ERM	PF00769.19	gi|298674126|ref|YP_003725876.1|	-	0.15	11.8	47.9	0.055	13.3	17.2	2.7	2	1	0	2	2	2	0	Ezrin/radixin/moesin	family
SlyX	PF04102.12	gi|298674126|ref|YP_003725876.1|	-	0.18	12.4	21.4	0.068	13.8	1.6	5.4	4	1	1	5	5	5	0	SlyX
DUF4795	PF16043.5	gi|298674126|ref|YP_003725876.1|	-	0.36	10.4	59.7	1.4	8.5	25.6	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4795)
CENP-F_leu_zip	PF10473.9	gi|298674126|ref|YP_003725876.1|	-	0.45	10.5	65.9	0.11	12.5	27.8	3.4	2	1	1	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
UPF0242	PF06785.11	gi|298674126|ref|YP_003725876.1|	-	0.47	10.5	68.8	0.044	13.9	22.3	3.3	1	1	2	3	3	3	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
DUF948	PF06103.11	gi|298674126|ref|YP_003725876.1|	-	0.6	10.4	27.6	2.7	8.3	2.9	4.8	2	2	2	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF948)
AAA_23	PF13476.6	gi|298674126|ref|YP_003725876.1|	-	1.2	9.6	81.6	0.026	15.0	31.1	4.4	2	1	2	4	4	2	0	AAA	domain
zf-C4H2	PF10146.9	gi|298674126|ref|YP_003725876.1|	-	2.4	8.4	58.8	1.2	9.4	25.5	3.3	1	1	1	2	2	2	0	Zinc	finger-containing	protein
DUF724	PF05266.14	gi|298674126|ref|YP_003725876.1|	-	2.5	7.9	59.4	0.076	12.8	11.6	5.1	2	1	4	6	6	6	0	Protein	of	unknown	function	(DUF724)
DUF1644	PF07800.12	gi|298674126|ref|YP_003725876.1|	-	2.8	8.0	14.2	0.021	14.9	2.5	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1644)
APG6_N	PF17675.1	gi|298674126|ref|YP_003725876.1|	-	3.1	8.4	68.4	5.8	7.4	22.1	4.6	1	1	3	4	4	4	0	Apg6	coiled-coil	region
Aminopep	PF10023.9	gi|298674126|ref|YP_003725876.1|	-	3.8	6.8	25.1	0.26	10.6	7.3	3.0	2	2	1	3	3	3	0	Putative	aminopeptidase
DUF3287	PF11690.8	gi|298674126|ref|YP_003725876.1|	-	5.9	6.6	15.5	0.12	12.1	0.8	4.1	4	1	1	5	5	4	0	Protein	of	unknown	function	(DUF3287)
TMPIT	PF07851.13	gi|298674126|ref|YP_003725876.1|	-	6.4	5.9	49.6	1.8	7.7	15.0	3.6	1	1	2	4	4	4	0	TMPIT-like	protein
DUF5082	PF16888.5	gi|298674126|ref|YP_003725876.1|	-	9.7	6.5	60.8	4.5	7.6	20.9	4.3	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF5082)
PAPS_reduct	PF01507.19	gi|298674128|ref|YP_003725878.1|	-	2.4e-39	135.2	0.4	3.9e-38	131.2	0.0	2.5	2	1	0	2	2	2	1	Phosphoadenosine	phosphosulfate	reductase	family
Fer4_6	PF12837.7	gi|298674128|ref|YP_003725878.1|	-	2.5e-05	24.2	9.7	0.016	15.2	0.3	3.0	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674128|ref|YP_003725878.1|	-	0.0001	22.8	19.9	0.00058	20.4	8.1	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674128|ref|YP_003725878.1|	-	0.00042	20.4	20.4	0.0034	17.5	9.2	2.5	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298674128|ref|YP_003725878.1|	-	0.0011	18.7	4.1	0.0011	18.7	4.1	3.0	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|298674128|ref|YP_003725878.1|	-	0.0011	18.9	12.4	0.21	11.8	6.0	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298674128|ref|YP_003725878.1|	-	0.0064	16.9	5.8	0.011	16.2	0.4	2.6	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674128|ref|YP_003725878.1|	-	0.013	16.4	0.4	0.013	16.4	0.4	3.1	3	1	1	4	4	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.6	gi|298674128|ref|YP_003725878.1|	-	0.02	15.4	0.4	0.02	15.4	0.4	2.9	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298674128|ref|YP_003725878.1|	-	0.021	15.3	3.8	0.021	15.3	3.8	2.9	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298674128|ref|YP_003725878.1|	-	0.039	14.1	13.5	0.12	12.5	4.3	2.6	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298674128|ref|YP_003725878.1|	-	4.4	8.5	15.7	0.79	10.8	6.8	2.8	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298674128|ref|YP_003725878.1|	-	5.2	7.3	22.6	0.31	11.2	6.4	2.5	2	1	0	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298674128|ref|YP_003725878.1|	-	6	7.7	10.5	7.2	7.4	0.3	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|298674128|ref|YP_003725878.1|	-	8.6	7.0	12.7	17	6.0	3.9	3.1	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
tRNA_lig_kinase	PF08303.11	gi|298674132|ref|YP_003725882.1|	-	0.2	11.8	0.1	0.2	11.8	0.1	2.3	3	0	0	3	3	3	0	tRNA	ligase	kinase	domain
JAMP	PF05571.12	gi|298674132|ref|YP_003725882.1|	-	3.7	7.1	5.8	3.2	7.3	0.1	2.7	3	0	0	3	3	3	0	JNK1/MAPK8-associated	membrane	protein
EF-hand_11	PF08976.11	gi|298674133|ref|YP_003725883.1|	-	0.024	15.5	0.0	0.036	14.9	0.0	1.3	1	1	0	1	1	1	0	EF-hand	domain
Mrr_cat	PF04471.12	gi|298674134|ref|YP_003725884.1|	-	6.4e-20	71.3	0.5	1.6e-19	70.0	0.5	1.7	1	0	0	1	1	1	1	Restriction	endonuclease
DDE_3	PF13358.6	gi|298674135|ref|YP_003725885.1|	-	3.1e-32	111.3	0.1	4e-32	111.0	0.1	1.1	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
AviRa	PF11599.8	gi|298674135|ref|YP_003725885.1|	-	0.053	13.0	0.2	0.097	12.1	0.1	1.5	2	0	0	2	2	2	0	RRNA	methyltransferase	AviRa
SMC_ScpB	PF04079.16	gi|298674135|ref|YP_003725885.1|	-	0.1	12.2	0.0	0.17	11.5	0.0	1.5	1	0	0	1	1	1	0	Segregation	and	condensation	complex	subunit	ScpB
HTH_32	PF13565.6	gi|298674136|ref|YP_003725886.1|	-	8.6e-11	42.3	0.0	4.8e-10	39.9	0.0	1.9	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_29	PF13551.6	gi|298674136|ref|YP_003725886.1|	-	6.4e-10	38.9	0.0	1.1e-09	38.1	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|298674136|ref|YP_003725886.1|	-	4.2e-05	23.2	0.0	0.00018	21.2	0.0	2.0	2	0	0	2	2	2	1	Homeodomain-like	domain
Clathrin	PF00637.20	gi|298674136|ref|YP_003725886.1|	-	0.034	14.0	0.3	0.072	13.0	0.3	1.5	1	0	0	1	1	1	0	Region	in	Clathrin	and	VPS
Pneumovirus_M2	PF06436.11	gi|298674138|ref|YP_003725888.1|	-	0.016	14.7	0.3	0.026	14.0	0.3	1.4	1	0	0	1	1	1	0	Pneumovirus	matrix	protein	2	(M2)
DUF2040	PF09745.9	gi|298674138|ref|YP_003725888.1|	-	0.036	14.1	2.1	0.054	13.6	1.7	1.6	1	1	0	1	1	1	0	Coiled-coil	domain-containing	protein	55	(DUF2040)
Tagatose_6_P_K	PF08013.11	gi|298674138|ref|YP_003725888.1|	-	0.04	12.6	0.2	0.061	12.0	0.2	1.3	1	1	0	1	1	1	0	Tagatose	6	phosphate	kinase
ERp29	PF07749.12	gi|298674138|ref|YP_003725888.1|	-	0.074	13.9	2.9	0.12	13.2	0.4	2.4	1	1	1	2	2	2	0	Endoplasmic	reticulum	protein	ERp29,	C-terminal	domain
N6_Mtase	PF02384.16	gi|298674140|ref|YP_003725890.1|	-	4.6e-34	118.1	0.0	8.9e-34	117.2	0.0	1.4	1	0	0	1	1	1	1	N-6	DNA	Methylase
HSDR_N_2	PF13588.6	gi|298674140|ref|YP_003725890.1|	-	2.5e-29	101.5	0.2	1.2e-28	99.3	0.0	2.1	2	0	0	2	2	2	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
UPF0020	PF01170.18	gi|298674140|ref|YP_003725890.1|	-	0.016	14.9	0.0	0.38	10.4	0.0	2.4	2	0	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
DDE_Tnp_1	PF01609.21	gi|298674142|ref|YP_003725892.1|	-	3.8e-20	72.5	2.3	7.2e-20	71.5	2.3	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|298674142|ref|YP_003725892.1|	-	7.3e-05	22.7	0.3	0.00019	21.4	0.3	1.7	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
Fam20C	PF06702.12	gi|298674142|ref|YP_003725892.1|	-	0.045	13.6	2.3	0.047	13.5	0.1	2.2	3	0	0	3	3	3	0	Golgi	casein	kinase,	C-terminal,	Fam20
GATase_4	PF13230.6	gi|298674145|ref|YP_003725895.1|	-	1.3e-75	253.8	0.0	1.6e-75	253.5	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.6	gi|298674145|ref|YP_003725895.1|	-	0.0025	18.0	0.0	0.0041	17.3	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
DUF5053	PF16476.5	gi|298674145|ref|YP_003725895.1|	-	0.13	11.9	1.1	0.26	11.0	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5053)
GATase_4	PF13230.6	gi|298674146|ref|YP_003725896.1|	-	3.9e-78	262.1	0.0	5.1e-78	261.7	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.6	gi|298674146|ref|YP_003725896.1|	-	1.2e-07	32.0	0.0	2e-07	31.2	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
DUF5053	PF16476.5	gi|298674146|ref|YP_003725896.1|	-	0.031	13.9	0.1	0.068	12.8	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5053)
zf-SNAP50_C	PF12251.8	gi|298674147|ref|YP_003725897.1|	-	0.13	12.0	1.0	0.18	11.4	1.0	1.3	1	0	0	1	1	1	0	snRNA-activating	protein	of	50kDa	MW	C	terminal
Zn-ribbon_8	PF09723.10	gi|298674147|ref|YP_003725897.1|	-	0.14	12.3	3.9	0.25	11.5	3.9	1.4	1	0	0	1	1	1	0	Zinc	ribbon	domain
N6_Mtase	PF02384.16	gi|298674148|ref|YP_003725898.1|	-	9.8e-54	182.7	0.0	1.4e-53	182.3	0.0	1.1	1	0	0	1	1	1	1	N-6	DNA	Methylase
HsdM_N	PF12161.8	gi|298674148|ref|YP_003725898.1|	-	6.1e-07	30.1	3.9	6.3e-07	30.1	0.4	2.7	2	2	0	2	2	2	1	HsdM	N-terminal	domain
UPF0020	PF01170.18	gi|298674148|ref|YP_003725898.1|	-	0.1	12.3	0.0	0.2	11.3	0.0	1.4	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Sec8_exocyst	PF04048.14	gi|298674148|ref|YP_003725898.1|	-	0.12	12.3	2.3	0.15	11.9	0.3	2.1	2	0	0	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
Methylase_S	PF01420.19	gi|298674149|ref|YP_003725899.1|	-	3.3e-06	27.4	5.9	4.6e-06	26.9	5.9	1.1	1	0	0	1	1	1	1	Type	I	restriction	modification	DNA	specificity	domain
HXXSHH	PF07586.11	gi|298674149|ref|YP_003725899.1|	-	0.17	11.5	0.1	0.35	10.4	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1552)
PP2C_2	PF13672.6	gi|298674150|ref|YP_003725900.1|	-	4.5e-12	46.1	0.0	7.7e-12	45.3	0.0	1.4	1	1	0	1	1	1	1	Protein	phosphatase	2C
PP2C	PF00481.21	gi|298674150|ref|YP_003725900.1|	-	3.1e-11	43.4	0.2	4.8e-06	26.4	0.1	2.1	2	0	0	2	2	2	2	Protein	phosphatase	2C
SpoIIE	PF07228.12	gi|298674150|ref|YP_003725900.1|	-	5.5e-07	29.7	0.2	1.4e-06	28.4	0.2	1.7	1	1	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
DUF4295	PF14128.6	gi|298674150|ref|YP_003725900.1|	-	0.029	14.2	0.2	1.1	9.1	0.1	2.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4295)
Actin	PF00022.19	gi|298674150|ref|YP_003725900.1|	-	0.043	12.4	0.0	0.055	12.1	0.0	1.1	1	0	0	1	1	1	0	Actin
DUF4025	PF13217.6	gi|298674151|ref|YP_003725901.1|	-	0.0031	17.3	0.0	0.0055	16.5	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4025)
DEAD	PF00270.29	gi|298674154|ref|YP_003725904.1|	-	2e-25	89.6	0.1	1.5e-24	86.7	0.0	2.4	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|298674154|ref|YP_003725904.1|	-	2.9e-12	46.9	0.0	7e-12	45.7	0.0	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|298674154|ref|YP_003725904.1|	-	4.5e-10	39.9	0.0	1.4e-08	35.1	0.0	2.9	2	1	0	2	2	2	1	Helicase	conserved	C-terminal	domain
HHH_5	PF14520.6	gi|298674154|ref|YP_003725904.1|	-	2.1e-07	31.4	0.3	1.8e-06	28.5	0.1	2.7	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
DNA_pol_lambd_f	PF10391.9	gi|298674154|ref|YP_003725904.1|	-	2.9e-05	23.8	0.0	0.00017	21.3	0.0	2.3	2	0	0	2	2	2	1	Fingers	domain	of	DNA	polymerase	lambda
Sec63	PF02889.16	gi|298674154|ref|YP_003725904.1|	-	0.00031	20.0	0.0	0.00048	19.4	0.0	1.2	1	0	0	1	1	1	1	Sec63	Brl	domain
Cdd1	PF11731.8	gi|298674154|ref|YP_003725904.1|	-	0.017	15.4	0.0	0.055	13.7	0.0	1.9	1	0	0	1	1	1	0	Pathogenicity	locus
UPF0254	PF06787.11	gi|298674154|ref|YP_003725904.1|	-	0.057	13.2	0.0	0.15	11.8	0.0	1.7	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0254)
Histidinol_dh	PF00815.20	gi|298674155|ref|YP_003725905.1|	-	5.4e-167	555.9	3.6	6.4e-167	555.7	3.6	1.0	1	0	0	1	1	1	1	Histidinol	dehydrogenase
Toprim_3	PF13362.6	gi|298674155|ref|YP_003725905.1|	-	0.16	12.3	0.8	1.7	9.1	0.1	2.5	2	0	0	2	2	2	0	Toprim	domain
DUF1699	PF08004.11	gi|298674156|ref|YP_003725906.1|	-	5.8e-62	207.1	1.6	6.6e-62	207.0	1.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1699)
Rad10	PF03834.14	gi|298674157|ref|YP_003725907.1|	-	0.088	12.8	2.5	4.2	7.4	0.3	2.5	2	0	0	2	2	2	0	Binding	domain	of	DNA	repair	protein	Ercc1	(rad10/Swi10)
PALP	PF00291.25	gi|298674158|ref|YP_003725908.1|	-	5.5e-42	144.2	0.0	6.4e-42	144.0	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Phos_pyr_kin	PF08543.12	gi|298674159|ref|YP_003725909.1|	-	2e-84	282.9	0.4	2.9e-84	282.3	0.4	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
ThiP_synth	PF10120.9	gi|298674159|ref|YP_003725909.1|	-	1.3e-67	226.6	0.1	2.4e-67	225.7	0.1	1.4	1	0	0	1	1	1	1	Thiamine-phosphate	synthase
PfkB	PF00294.24	gi|298674159|ref|YP_003725909.1|	-	4e-10	39.5	0.1	1.2e-09	37.9	0.0	1.7	1	1	1	2	2	2	1	pfkB	family	carbohydrate	kinase
HK	PF02110.15	gi|298674159|ref|YP_003725909.1|	-	0.00023	20.6	0.1	0.00062	19.2	0.1	1.7	1	1	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Carb_kinase	PF01256.17	gi|298674159|ref|YP_003725909.1|	-	0.0071	15.9	0.6	0.012	15.1	0.6	1.4	1	1	0	1	1	1	1	Carbohydrate	kinase
LAM_C	PF12544.8	gi|298674159|ref|YP_003725909.1|	-	0.019	15.2	0.0	0.04	14.1	0.0	1.5	1	0	0	1	1	1	0	Lysine-2,3-aminomutase
LSM	PF01423.22	gi|298674160|ref|YP_003725910.1|	-	5.1e-23	80.5	0.4	5.6e-23	80.4	0.4	1.0	1	0	0	1	1	1	1	LSM	domain
Ribosomal_L37e	PF01907.19	gi|298674161|ref|YP_003725911.1|	-	1.9e-22	79.2	12.6	2e-22	79.1	12.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
Rubredoxin_2	PF18073.1	gi|298674161|ref|YP_003725911.1|	-	0.046	13.5	2.7	3.4	7.5	0.2	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Zn-ribbon_8	PF09723.10	gi|298674161|ref|YP_003725911.1|	-	0.063	13.4	3.9	1.3	9.2	3.5	2.0	1	1	1	2	2	2	0	Zinc	ribbon	domain
HypA	PF01155.19	gi|298674161|ref|YP_003725911.1|	-	0.076	13.0	1.2	0.083	12.9	1.2	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zn-ribbon_14	PF16503.5	gi|298674161|ref|YP_003725911.1|	-	0.53	9.8	8.5	5.6	6.6	8.4	2.0	1	1	0	1	1	1	0	Zinc-ribbon
zf-C2H2_3	PF13878.6	gi|298674161|ref|YP_003725911.1|	-	0.95	9.3	7.1	0.8	9.6	0.8	2.2	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
GATase_7	PF13537.6	gi|298674162|ref|YP_003725912.1|	-	7.9e-23	80.7	0.0	1.5e-22	79.8	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.6	gi|298674162|ref|YP_003725912.1|	-	2e-22	79.9	0.0	6.1e-22	78.3	0.0	1.8	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.6	gi|298674162|ref|YP_003725912.1|	-	4.1e-08	32.5	0.0	3.4e-07	29.4	0.0	2.0	2	0	0	2	2	2	1	Glutamine	amidotransferases	class-II
Pribosyltran	PF00156.27	gi|298674162|ref|YP_003725912.1|	-	0.00076	19.0	0.1	0.0014	18.2	0.1	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
OrfB_IS605	PF01385.19	gi|298674163|ref|YP_003725913.1|	-	3.3e-26	91.9	1.9	7.6e-26	90.7	1.9	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674163|ref|YP_003725913.1|	-	5.3e-24	83.9	0.4	1.1e-23	82.9	0.4	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298674163|ref|YP_003725913.1|	-	4.2e-20	71.0	1.4	9.2e-20	69.9	1.4	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298674163|ref|YP_003725913.1|	-	0.008	16.3	0.3	0.02	15.1	0.3	1.6	1	0	0	1	1	1	1	Piccolo	Zn-finger
Phage_GP20	PF06810.11	gi|298674163|ref|YP_003725913.1|	-	0.039	13.8	4.7	0.24	11.2	1.9	2.4	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
LemA	PF04011.12	gi|298674163|ref|YP_003725913.1|	-	0.06	13.2	0.7	1.1	9.1	0.1	2.3	2	0	0	2	2	2	0	LemA	family
zf-UDP	PF14569.6	gi|298674163|ref|YP_003725913.1|	-	0.39	10.9	1.6	2	8.6	1.6	2.1	1	1	0	1	1	1	0	Zinc-binding	RING-finger
Thi4	PF01946.17	gi|298674164|ref|YP_003725914.1|	-	9e-77	257.5	1.6	1.1e-76	257.2	1.6	1.0	1	0	0	1	1	1	1	Thi4	family
FAD_oxidored	PF12831.7	gi|298674164|ref|YP_003725914.1|	-	1.4e-10	41.1	0.3	1.9e-10	40.7	0.3	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|298674164|ref|YP_003725914.1|	-	2.3e-07	30.4	0.2	2.6e-07	30.1	0.2	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|298674164|ref|YP_003725914.1|	-	4.8e-06	25.9	3.2	0.00015	21.0	0.9	2.1	1	1	1	2	2	2	2	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|298674164|ref|YP_003725914.1|	-	5.7e-06	26.5	0.1	1.3e-05	25.3	0.1	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|298674164|ref|YP_003725914.1|	-	6.5e-05	21.8	1.4	0.00011	21.1	1.4	1.3	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|298674164|ref|YP_003725914.1|	-	0.0043	16.3	0.0	0.0072	15.6	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
GIDA	PF01134.22	gi|298674164|ref|YP_003725914.1|	-	0.0054	15.9	0.3	0.011	14.8	0.3	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.12	gi|298674164|ref|YP_003725914.1|	-	0.01	14.9	1.4	0.076	12.1	0.2	2.0	2	0	0	2	2	2	0	Lycopene	cyclase	protein
DAO	PF01266.24	gi|298674164|ref|YP_003725914.1|	-	0.039	13.5	1.8	0.23	11.0	0.2	2.0	1	1	1	2	2	2	0	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.6	gi|298674164|ref|YP_003725914.1|	-	0.08	12.9	0.3	0.17	11.9	0.3	1.5	1	0	0	1	1	1	0	FAD-NAD(P)-binding
AAA	PF00004.29	gi|298674165|ref|YP_003725915.1|	-	7.7e-38	129.9	0.0	1.3e-37	129.2	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.14	gi|298674165|ref|YP_003725915.1|	-	4.3e-09	36.7	0.4	2.8e-08	34.1	0.0	2.1	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
DUF815	PF05673.13	gi|298674165|ref|YP_003725915.1|	-	1.3e-07	31.0	0.0	1.8e-05	24.0	0.0	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
TIP49	PF06068.13	gi|298674165|ref|YP_003725915.1|	-	3.3e-07	29.8	0.0	8.8e-07	28.4	0.0	1.7	1	1	0	1	1	1	1	TIP49	P-loop	domain
AAA_lid_3	PF17862.1	gi|298674165|ref|YP_003725915.1|	-	1.1e-05	25.1	0.0	2.2e-05	24.1	0.0	1.6	1	0	0	1	1	1	1	AAA+	lid	domain
RuvB_N	PF05496.12	gi|298674165|ref|YP_003725915.1|	-	3.9e-05	23.5	0.0	0.00025	20.8	0.0	2.1	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_33	PF13671.6	gi|298674165|ref|YP_003725915.1|	-	8.6e-05	22.7	0.0	0.00018	21.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|298674165|ref|YP_003725915.1|	-	8.8e-05	22.8	0.5	0.0042	17.3	0.1	2.5	1	1	0	2	2	2	1	AAA	domain
AAA_28	PF13521.6	gi|298674165|ref|YP_003725915.1|	-	0.0002	21.7	0.0	0.0016	18.7	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|298674165|ref|YP_003725915.1|	-	0.00029	21.3	0.1	0.019	15.3	0.0	2.4	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_5	PF07728.14	gi|298674165|ref|YP_003725915.1|	-	0.00037	20.5	0.1	0.0018	18.3	0.0	2.3	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_7	PF12775.7	gi|298674165|ref|YP_003725915.1|	-	0.00085	18.9	0.1	0.016	14.8	0.0	2.3	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
Bac_DnaA	PF00308.18	gi|298674165|ref|YP_003725915.1|	-	0.0026	17.6	0.1	0.005	16.7	0.1	1.5	1	1	0	1	1	1	1	Bacterial	dnaA	protein
Mg_chelatase	PF01078.21	gi|298674165|ref|YP_003725915.1|	-	0.003	17.0	0.1	0.0064	15.9	0.1	1.5	1	1	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.17	gi|298674165|ref|YP_003725915.1|	-	0.0035	17.1	0.0	0.0049	16.6	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
RNA_helicase	PF00910.22	gi|298674165|ref|YP_003725915.1|	-	0.0058	17.0	0.1	0.018	15.4	0.0	2.0	2	0	0	2	2	1	1	RNA	helicase
AAA_24	PF13479.6	gi|298674165|ref|YP_003725915.1|	-	0.0062	16.3	0.3	0.014	15.1	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
TsaE	PF02367.17	gi|298674165|ref|YP_003725915.1|	-	0.0063	16.5	0.0	0.012	15.6	0.0	1.4	1	0	0	1	1	1	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
TniB	PF05621.11	gi|298674165|ref|YP_003725915.1|	-	0.0086	15.5	0.0	0.038	13.4	0.0	2.0	2	0	0	2	2	2	1	Bacterial	TniB	protein
AAA_18	PF13238.6	gi|298674165|ref|YP_003725915.1|	-	0.015	15.8	0.0	0.042	14.4	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
Torsin	PF06309.11	gi|298674165|ref|YP_003725915.1|	-	0.052	13.6	0.0	0.16	12.1	0.0	1.7	2	0	0	2	2	2	0	Torsin
IPT	PF01745.16	gi|298674165|ref|YP_003725915.1|	-	0.058	12.8	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	Isopentenyl	transferase
HYR	PF02494.16	gi|298674165|ref|YP_003725915.1|	-	0.058	13.7	0.0	9.3	6.7	0.0	2.5	2	0	0	2	2	2	0	HYR	domain
NACHT	PF05729.12	gi|298674165|ref|YP_003725915.1|	-	0.062	13.2	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
Sigma54_activat	PF00158.26	gi|298674165|ref|YP_003725915.1|	-	0.072	12.8	0.0	0.15	11.8	0.0	1.6	1	1	0	1	1	1	0	Sigma-54	interaction	domain
AAA_25	PF13481.6	gi|298674165|ref|YP_003725915.1|	-	0.28	10.7	0.4	0.89	9.1	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
SH3_12	PF18129.1	gi|298674166|ref|YP_003725916.1|	-	0.01	15.9	0.0	0.014	15.5	0.0	1.3	1	1	0	1	1	1	0	Xrn1	SH3-like	domain
LTD	PF00932.19	gi|298674166|ref|YP_003725916.1|	-	0.037	14.4	0.0	0.046	14.1	0.0	1.1	1	0	0	1	1	1	0	Lamin	Tail	Domain
Lactamase_B_2	PF12706.7	gi|298674167|ref|YP_003725917.1|	-	3.7e-20	72.3	0.0	5.1e-09	35.9	0.0	2.1	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|298674167|ref|YP_003725917.1|	-	2.6e-09	37.4	0.0	1.1e-08	35.3	0.0	2.1	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.6	gi|298674167|ref|YP_003725917.1|	-	1.8e-05	24.3	0.0	3.2e-05	23.5	0.0	1.3	1	0	0	1	1	1	1	tRNase	Z	endonuclease
Ribosomal_S8e	PF01201.22	gi|298674169|ref|YP_003725919.1|	-	1.6e-35	122.3	4.9	1.8e-35	122.1	4.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
AsnC_trans_reg	PF01037.21	gi|298674170|ref|YP_003725920.1|	-	9.4e-15	54.3	0.8	1.3e-14	53.9	0.2	1.6	2	0	0	2	2	2	1	Lrp/AsnC	ligand	binding	domain
HTH_24	PF13412.6	gi|298674170|ref|YP_003725920.1|	-	7.5e-12	44.6	0.1	2.1e-11	43.2	0.1	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|298674170|ref|YP_003725920.1|	-	4e-06	26.6	0.0	1.3e-05	25.0	0.0	1.9	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
TFIIE_alpha	PF02002.17	gi|298674170|ref|YP_003725920.1|	-	2.6e-05	24.0	0.5	4.7e-05	23.2	0.5	1.4	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_Crp_2	PF13545.6	gi|298674170|ref|YP_003725920.1|	-	0.00014	21.8	0.0	0.00033	20.6	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR	PF01047.22	gi|298674170|ref|YP_003725920.1|	-	0.0002	21.2	0.1	0.00069	19.5	0.0	1.8	2	0	0	2	2	2	1	MarR	family
TrmB	PF01978.19	gi|298674170|ref|YP_003725920.1|	-	0.00043	20.1	0.0	0.0013	18.6	0.0	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|298674170|ref|YP_003725920.1|	-	0.0013	18.5	0.0	0.0033	17.2	0.0	1.6	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.7	gi|298674170|ref|YP_003725920.1|	-	0.0028	17.5	0.0	0.0053	16.6	0.0	1.4	1	0	0	1	1	1	1	MarR	family
DUF4423	PF14394.6	gi|298674170|ref|YP_003725920.1|	-	0.0052	16.5	0.1	0.021	14.5	0.1	1.8	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4423)
Utp13	PF08625.11	gi|298674170|ref|YP_003725920.1|	-	0.0062	16.4	0.0	0.0071	16.3	0.0	1.2	1	0	0	1	1	1	1	Utp13	specific	WD40	associated	domain
Rio2_N	PF09202.11	gi|298674170|ref|YP_003725920.1|	-	0.0066	16.6	0.0	0.18	12.1	0.0	2.3	2	0	0	2	2	2	1	Rio2,	N-terminal
PnpCD_PnpD_N	PF18191.1	gi|298674170|ref|YP_003725920.1|	-	0.059	12.9	0.0	0.1	12.2	0.0	1.4	1	0	0	1	1	1	0	Hydroquinone	1,2-dioxygenase	large	subunit	N-terminal
Rrf2	PF02082.20	gi|298674170|ref|YP_003725920.1|	-	0.071	13.5	0.0	0.38	11.1	0.0	2.1	2	0	0	2	2	2	0	Transcriptional	regulator
DprA_WH	PF17782.1	gi|298674170|ref|YP_003725920.1|	-	0.08	13.1	0.0	0.15	12.2	0.0	1.4	1	0	0	1	1	1	0	DprA	winged	helix	domain
HTH_47	PF16221.5	gi|298674170|ref|YP_003725920.1|	-	0.084	12.4	0.0	0.15	11.6	0.0	1.4	1	0	0	1	1	1	0	winged	helix-turn-helix
DUF2250	PF10007.9	gi|298674170|ref|YP_003725920.1|	-	0.087	12.9	0.0	0.15	12.2	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_20	PF12840.7	gi|298674170|ref|YP_003725920.1|	-	0.19	11.8	0.0	0.38	10.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Aminotran_1_2	PF00155.21	gi|298674171|ref|YP_003725921.1|	-	6e-68	229.7	0.0	6.8e-68	229.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|298674171|ref|YP_003725921.1|	-	2.7e-13	50.0	0.2	4.1e-13	49.4	0.2	1.1	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|298674171|ref|YP_003725921.1|	-	1.9e-08	33.7	0.1	2.9e-08	33.1	0.1	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|298674171|ref|YP_003725921.1|	-	1.4e-06	27.1	0.4	2.3e-06	26.4	0.4	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|298674171|ref|YP_003725921.1|	-	1.4e-05	24.5	0.0	2.3e-05	23.9	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
OKR_DC_1	PF01276.20	gi|298674171|ref|YP_003725921.1|	-	0.0034	16.2	0.1	0.0059	15.4	0.1	1.3	1	0	0	1	1	1	1	Orn/Lys/Arg	decarboxylase,	major	domain
DUF3396	PF11876.8	gi|298674171|ref|YP_003725921.1|	-	0.18	11.3	0.0	0.3	10.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3396)
TrmB	PF01978.19	gi|298674172|ref|YP_003725922.1|	-	1.3e-17	63.4	0.2	2.1e-17	62.8	0.2	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.17	gi|298674172|ref|YP_003725922.1|	-	0.012	15.4	0.2	0.015	15.2	0.2	1.2	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HTH_Crp_2	PF13545.6	gi|298674172|ref|YP_003725922.1|	-	0.031	14.2	0.0	0.33	11.0	0.0	2.0	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|298674172|ref|YP_003725922.1|	-	0.034	14.0	0.0	0.05	13.4	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
MarR	PF01047.22	gi|298674172|ref|YP_003725922.1|	-	0.063	13.2	0.0	0.094	12.7	0.0	1.2	1	0	0	1	1	1	0	MarR	family
HTH_11	PF08279.12	gi|298674172|ref|YP_003725922.1|	-	0.078	12.9	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.7	gi|298674172|ref|YP_003725922.1|	-	0.079	13.0	0.1	0.11	12.6	0.1	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF5591	PF17884.1	gi|298674173|ref|YP_003725923.1|	-	6.8e-23	81.2	0.2	9.6e-23	80.7	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5591)
DUF508	PF04370.12	gi|298674173|ref|YP_003725923.1|	-	0.055	13.2	0.0	0.087	12.6	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF508)
ATPase	PF06745.13	gi|298674174|ref|YP_003725924.1|	-	7.5e-50	169.4	2.4	9.4e-50	169.1	2.4	1.0	1	0	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|298674174|ref|YP_003725924.1|	-	1.4e-07	30.5	0.2	1.8e-07	30.2	0.2	1.1	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_25	PF13481.6	gi|298674174|ref|YP_003725924.1|	-	1.9e-05	24.3	0.0	2.6e-05	23.9	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
Rad51	PF08423.11	gi|298674174|ref|YP_003725924.1|	-	0.0015	17.9	0.2	0.0083	15.4	0.1	1.9	2	0	0	2	2	2	1	Rad51
DnaB_C	PF03796.15	gi|298674174|ref|YP_003725924.1|	-	0.0024	17.3	0.1	0.0069	15.8	0.0	1.7	1	1	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
DUF2075	PF09848.9	gi|298674174|ref|YP_003725924.1|	-	0.0035	16.6	0.3	0.0047	16.2	0.3	1.4	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA	PF00004.29	gi|298674174|ref|YP_003725924.1|	-	0.0092	16.4	1.3	0.03	14.7	1.3	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|298674174|ref|YP_003725924.1|	-	0.052	13.8	0.1	0.12	12.6	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|298674174|ref|YP_003725924.1|	-	0.065	13.0	0.1	0.16	11.6	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
NTP_transf_3	PF12804.7	gi|298674175|ref|YP_003725925.1|	-	6.9e-15	55.8	0.0	9.3e-15	55.3	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|298674175|ref|YP_003725925.1|	-	2.9e-08	33.7	0.0	4.2e-08	33.2	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.19	gi|298674175|ref|YP_003725925.1|	-	4.9e-06	26.6	0.0	7.2e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
NTP_transferase	PF00483.23	gi|298674175|ref|YP_003725925.1|	-	7.9e-05	22.3	0.0	0.00012	21.8	0.0	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
CofC	PF01983.16	gi|298674175|ref|YP_003725925.1|	-	0.016	14.4	0.5	0.032	13.4	0.2	1.6	2	0	0	2	2	2	0	Guanylyl	transferase	CofC	like
DUF2064	PF09837.9	gi|298674175|ref|YP_003725925.1|	-	0.14	12.0	0.0	0.22	11.4	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2064)
CobS	PF02654.15	gi|298674176|ref|YP_003725926.1|	-	1.7e-40	139.5	15.5	2e-40	139.2	15.5	1.1	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
PgpA	PF04608.13	gi|298674177|ref|YP_003725927.1|	-	1.1e-08	35.2	0.0	1.3e-08	34.9	0.0	1.2	1	0	0	1	1	1	1	Phosphatidylglycerophosphatase	A
CobD_Cbib	PF03186.13	gi|298674178|ref|YP_003725928.1|	-	1.1e-86	290.6	0.0	1.3e-86	290.2	0.0	1.1	1	0	0	1	1	1	1	CobD/Cbib	protein
AmpE	PF17113.5	gi|298674178|ref|YP_003725928.1|	-	0.00011	21.7	0.0	0.0002	20.8	0.0	1.4	1	0	0	1	1	1	1	Regulatory	signalling	modulator	protein	AmpE
Aminotran_1_2	PF00155.21	gi|298674179|ref|YP_003725929.1|	-	9.9e-47	159.8	0.0	1.2e-46	159.5	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
zf-like	PF04071.12	gi|298674179|ref|YP_003725929.1|	-	1.1e-24	86.2	7.2	2.6e-24	84.9	7.2	1.6	1	0	0	1	1	1	1	Cysteine-rich	small	domain
Aminotran_5	PF00266.19	gi|298674179|ref|YP_003725929.1|	-	0.024	13.6	0.0	0.19	10.6	0.0	2.3	2	1	0	2	2	2	0	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|298674179|ref|YP_003725929.1|	-	0.17	11.2	0.0	0.27	10.5	0.0	1.2	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
tRNA-synt_His	PF13393.6	gi|298674180|ref|YP_003725930.1|	-	2e-64	217.8	0.0	2.5e-64	217.5	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.25	gi|298674180|ref|YP_003725930.1|	-	2.4e-16	60.2	0.0	9.1e-16	58.3	0.0	1.8	2	1	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|298674180|ref|YP_003725930.1|	-	2.8e-11	43.4	0.1	5.3e-11	42.5	0.1	1.4	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2	PF00152.20	gi|298674180|ref|YP_003725930.1|	-	8.8e-05	21.7	2.2	0.31	10.1	0.0	3.1	2	1	0	2	2	2	2	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.20	gi|298674180|ref|YP_003725930.1|	-	0.0021	17.6	0.0	0.023	14.2	0.0	2.4	2	1	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA_synthFbeta	PF17759.1	gi|298674180|ref|YP_003725930.1|	-	0.076	12.4	0.0	0.43	10.0	0.0	2.1	2	1	0	2	2	2	0	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
Ribosomal_S13_N	PF08069.12	gi|298674181|ref|YP_003725931.1|	-	3.6e-27	94.2	0.9	1e-26	92.7	0.5	1.9	2	0	0	2	2	2	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.22	gi|298674181|ref|YP_003725931.1|	-	4e-15	55.8	0.5	6.3e-15	55.2	0.5	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S15
DHHA1	PF02272.19	gi|298674182|ref|YP_003725932.1|	-	5.6e-15	56.0	1.4	1.5e-14	54.6	0.5	2.2	2	0	0	2	2	2	1	DHHA1	domain
DHH	PF01368.20	gi|298674182|ref|YP_003725932.1|	-	7.4e-06	26.1	0.6	1.9e-05	24.8	0.6	1.7	1	0	0	1	1	1	1	DHH	family
tRNA_bind_4	PF18490.1	gi|298674184|ref|YP_003725934.1|	-	9e-61	204.4	0.1	1.4e-60	203.8	0.1	1.3	1	0	0	1	1	1	1	tRNA-binding	domain
tRNA-synt_2b	PF00587.25	gi|298674184|ref|YP_003725934.1|	-	2.6e-05	24.3	0.0	5.8e-05	23.1	0.0	1.6	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Ribosomal_S3Ae	PF01015.18	gi|298674185|ref|YP_003725935.1|	-	1.5e-63	214.0	6.9	1.7e-63	213.9	6.9	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
Myosin_N	PF02736.19	gi|298674185|ref|YP_003725935.1|	-	0.15	11.9	0.6	0.15	11.9	0.6	2.1	2	0	0	2	2	2	0	Myosin	N-terminal	SH3-like	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674186|ref|YP_003725936.1|	-	0.00015	21.6	1.9	0.00021	21.2	1.9	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|298674186|ref|YP_003725936.1|	-	0.00043	19.9	1.7	0.56	10.0	0.2	2.3	2	0	0	2	2	2	2	A2L	zinc	ribbon	domain
Lar_restr_allev	PF14354.6	gi|298674186|ref|YP_003725936.1|	-	0.00046	20.5	0.3	0.00056	20.2	0.3	1.2	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-RRN7	PF11781.8	gi|298674186|ref|YP_003725936.1|	-	0.00081	19.0	0.5	0.00081	19.0	0.5	2.0	2	0	0	2	2	2	1	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Zn-ribbon_8	PF09723.10	gi|298674186|ref|YP_003725936.1|	-	0.002	18.2	0.3	1.8	8.7	0.0	2.3	2	0	0	2	2	2	2	Zinc	ribbon	domain
TackOD1	PF18551.1	gi|298674186|ref|YP_003725936.1|	-	0.0063	16.2	0.2	0.009	15.7	0.2	1.5	1	1	0	1	1	1	1	Thaumarchaeal	output	domain	1
TF_Zn_Ribbon	PF08271.12	gi|298674186|ref|YP_003725936.1|	-	0.011	15.2	2.6	0.041	13.4	2.6	2.0	1	1	0	1	1	1	0	TFIIB	zinc-binding
PADR1	PF08063.12	gi|298674186|ref|YP_003725936.1|	-	0.014	15.1	3.5	0.33	10.8	3.8	2.1	1	1	1	2	2	2	0	PADR1	(NUC008)	domain
DZR	PF12773.7	gi|298674186|ref|YP_003725936.1|	-	0.016	15.2	0.1	0.022	14.8	0.1	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.11	gi|298674186|ref|YP_003725936.1|	-	0.017	15.0	0.8	0.029	14.3	0.8	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
RNA_POL_M_15KD	PF02150.16	gi|298674186|ref|YP_003725936.1|	-	0.021	14.7	0.8	0.056	13.3	0.8	1.8	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
FYVE	PF01363.21	gi|298674186|ref|YP_003725936.1|	-	0.025	14.7	0.0	0.026	14.7	0.0	1.3	1	0	0	1	1	1	0	FYVE	zinc	finger
Rubredoxin_2	PF18073.1	gi|298674186|ref|YP_003725936.1|	-	0.037	13.8	4.7	0.19	11.5	0.2	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
PhnA_Zn_Ribbon	PF08274.12	gi|298674186|ref|YP_003725936.1|	-	0.093	12.7	1.7	0.15	12.1	1.7	1.3	1	0	0	1	1	1	0	PhnA	Zinc-Ribbon
zf-NADH-PPase	PF09297.11	gi|298674186|ref|YP_003725936.1|	-	0.095	12.4	1.5	2.2	8.0	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF35_N	PF12172.8	gi|298674186|ref|YP_003725936.1|	-	0.11	12.4	1.0	3.4	7.6	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
RecR	PF02132.15	gi|298674186|ref|YP_003725936.1|	-	0.19	11.3	1.4	10	5.8	0.1	2.4	2	0	0	2	2	2	0	RecR	protein
TFIIS_C	PF01096.18	gi|298674186|ref|YP_003725936.1|	-	0.42	10.5	3.5	9.5	6.2	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Cys_rich_CPXG	PF14255.6	gi|298674186|ref|YP_003725936.1|	-	0.44	10.5	0.3	0.44	10.5	0.3	2.2	2	1	0	2	2	2	0	Cysteine-rich	CPXCG
zf-ribbon_3	PF13248.6	gi|298674186|ref|YP_003725936.1|	-	4.4	6.9	8.8	5.6	6.5	0.5	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF523	PF04463.12	gi|298674187|ref|YP_003725937.1|	-	2.2e-32	111.9	0.1	3.7e-32	111.2	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF523)
DUF1722	PF08349.11	gi|298674187|ref|YP_003725937.1|	-	3.4e-25	88.6	1.2	6e-25	87.8	1.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1722)
tRNA-synt_1c	PF00749.21	gi|298674188|ref|YP_003725938.1|	-	1.7e-62	211.1	0.0	2.2e-62	210.8	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.18	gi|298674188|ref|YP_003725938.1|	-	1.6e-28	99.8	0.0	2.8e-28	99.0	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
FOXO-TAD	PF16676.5	gi|298674188|ref|YP_003725938.1|	-	0.13	12.7	0.2	0.27	11.7	0.2	1.5	1	0	0	1	1	1	0	Transactivation	domain	of	FOXO	protein	family
HTH_5	PF01022.20	gi|298674189|ref|YP_003725939.1|	-	0.0055	16.5	0.2	0.011	15.5	0.2	1.5	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.19	gi|298674189|ref|YP_003725939.1|	-	0.0059	16.5	0.0	0.01	15.7	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
RNA_pol_Rpc34	PF05158.12	gi|298674189|ref|YP_003725939.1|	-	0.017	14.5	0.1	0.024	14.0	0.1	1.2	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
Rrf2	PF02082.20	gi|298674189|ref|YP_003725939.1|	-	0.03	14.6	0.0	0.042	14.2	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_12	PF08461.10	gi|298674189|ref|YP_003725939.1|	-	0.055	13.4	1.0	0.1	12.5	0.1	2.0	2	1	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
RepL	PF05732.11	gi|298674189|ref|YP_003725939.1|	-	0.057	12.8	0.0	0.11	11.9	0.0	1.6	1	1	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
FAA_hydrolase	PF01557.18	gi|298674190|ref|YP_003725940.1|	-	1.8e-66	223.9	0.0	2.2e-66	223.6	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
KH_2	PF07650.17	gi|298674190|ref|YP_003725940.1|	-	0.091	12.6	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	KH	domain
Flavodoxin_2	PF02525.17	gi|298674191|ref|YP_003725941.1|	-	9.4e-56	188.7	0.0	1.1e-55	188.4	0.0	1.0	1	0	0	1	1	1	1	Flavodoxin-like	fold
FMN_red	PF03358.15	gi|298674191|ref|YP_003725941.1|	-	1.4e-11	44.3	0.0	4.1e-11	42.9	0.0	1.7	1	1	0	1	1	1	1	NADPH-dependent	FMN	reductase
zf-C2H2_4	PF13894.6	gi|298674192|ref|YP_003725942.1|	-	5.1e-07	30.0	2.7	6.3e-07	29.7	2.7	1.1	1	0	0	1	1	1	1	C2H2-type	zinc	finger
zf-C2H2	PF00096.26	gi|298674192|ref|YP_003725942.1|	-	2.3e-06	27.8	3.2	2.8e-06	27.5	3.2	1.1	1	0	0	1	1	1	1	Zinc	finger,	C2H2	type
zf-met	PF12874.7	gi|298674192|ref|YP_003725942.1|	-	1.8e-05	25.0	0.3	3e-05	24.3	0.3	1.4	1	0	0	1	1	1	1	Zinc-finger	of	C2H2	type
zf-C2H2_6	PF13912.6	gi|298674192|ref|YP_003725942.1|	-	2e-05	24.4	2.3	2.6e-05	24.1	2.3	1.2	1	0	0	1	1	1	1	C2H2-type	zinc	finger
zf-C2H2_jaz	PF12171.8	gi|298674192|ref|YP_003725942.1|	-	3e-05	24.2	1.2	5.4e-05	23.4	1.2	1.4	1	0	0	1	1	1	1	Zinc-finger	double-stranded	RNA-binding
zf-H2C2_2	PF13465.6	gi|298674192|ref|YP_003725942.1|	-	0.00052	20.3	8.5	0.081	13.4	1.4	2.1	2	0	0	2	2	2	2	Zinc-finger	double	domain
zf-C2H2_2	PF12756.7	gi|298674192|ref|YP_003725942.1|	-	0.00085	19.6	2.7	0.00097	19.4	2.7	1.0	1	0	0	1	1	1	1	C2H2	type	zinc-finger	(2	copies)
MRNIP	PF15749.5	gi|298674192|ref|YP_003725942.1|	-	0.0081	16.9	0.8	0.0093	16.7	0.8	1.1	1	0	0	1	1	1	1	MRN-interacting	protein
Actin_micro	PF17003.5	gi|298674192|ref|YP_003725942.1|	-	0.013	14.7	2.5	0.013	14.7	2.5	1.0	1	0	0	1	1	1	0	Putative	actin-like	family
RNA_POL_M_15KD	PF02150.16	gi|298674192|ref|YP_003725942.1|	-	0.023	14.5	0.4	0.029	14.3	0.4	1.2	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
Lar_restr_allev	PF14354.6	gi|298674192|ref|YP_003725942.1|	-	0.045	14.1	0.5	0.045	14.1	0.5	1.1	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-C2H2_3	PF13878.6	gi|298674192|ref|YP_003725942.1|	-	1.3	8.9	7.4	2.7	7.9	7.4	1.7	1	1	0	1	1	1	0	zinc-finger	of	acetyl-transferase	ESCO
Glyco_hydro_15	PF00723.21	gi|298674193|ref|YP_003725943.1|	-	2.3e-23	82.7	0.5	2.7e-15	56.1	0.2	3.0	2	1	1	3	3	3	3	Glycosyl	hydrolases	family	15
SnoaL	PF07366.12	gi|298674194|ref|YP_003725944.1|	-	5.3e-31	107.1	0.3	6.5e-31	106.7	0.3	1.1	1	0	0	1	1	1	1	SnoaL-like	polyketide	cyclase
SnoaL_2	PF12680.7	gi|298674194|ref|YP_003725944.1|	-	2.6e-15	56.9	0.1	3.3e-15	56.6	0.1	1.2	1	0	0	1	1	1	1	SnoaL-like	domain
DUF4440	PF14534.6	gi|298674194|ref|YP_003725944.1|	-	0.033	14.6	0.0	0.045	14.2	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4440)
DHODB_Fe-S_bind	PF10418.9	gi|298674195|ref|YP_003725945.1|	-	3.4e-12	46.0	5.8	6.4e-12	45.1	5.8	1.5	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
NAD_binding_1	PF00175.21	gi|298674195|ref|YP_003725945.1|	-	0.0015	19.2	0.0	0.0067	17.1	0.0	2.0	1	1	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
DHO_dh	PF01180.21	gi|298674196|ref|YP_003725946.1|	-	3.8e-63	213.5	1.3	4.5e-63	213.2	1.3	1.0	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.17	gi|298674196|ref|YP_003725946.1|	-	9e-08	31.6	0.9	1.3e-06	27.7	0.9	2.2	1	1	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
NMO	PF03060.15	gi|298674196|ref|YP_003725946.1|	-	0.00032	20.2	1.5	0.00059	19.3	1.5	1.5	1	1	0	1	1	1	1	Nitronate	monooxygenase
His_biosynth	PF00977.21	gi|298674196|ref|YP_003725946.1|	-	0.00033	20.2	0.2	0.00085	18.8	0.0	1.7	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
IMPDH	PF00478.25	gi|298674196|ref|YP_003725946.1|	-	0.0086	15.1	1.1	0.012	14.6	1.1	1.3	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
DUF561	PF04481.12	gi|298674196|ref|YP_003725946.1|	-	0.011	15.0	3.9	0.017	14.3	0.4	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF561)
ThiG	PF05690.14	gi|298674196|ref|YP_003725946.1|	-	0.071	12.4	0.2	0.071	12.4	0.2	2.1	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
G3P_antiterm	PF04309.12	gi|298674196|ref|YP_003725946.1|	-	0.1	12.0	2.3	22	4.4	0.1	3.3	4	0	0	4	4	4	0	Glycerol-3-phosphate	responsive	antiterminator
NanE	PF04131.14	gi|298674196|ref|YP_003725946.1|	-	0.15	11.3	1.1	1	8.5	0.9	2.5	2	1	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
Porphobil_deam	PF01379.20	gi|298674197|ref|YP_003725947.1|	-	2.7e-71	239.3	0.0	3.5e-71	238.9	0.0	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.15	gi|298674197|ref|YP_003725947.1|	-	9.2e-11	42.0	0.1	2.1e-10	40.8	0.1	1.6	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
Aminotran_3	PF00202.21	gi|298674198|ref|YP_003725948.1|	-	1.9e-73	247.4	0.0	2.5e-73	247.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|298674198|ref|YP_003725948.1|	-	0.021	14.0	0.0	0.027	13.6	0.0	1.3	1	0	0	1	1	1	0	Aminotransferase	class	I	and	II
ALAD	PF00490.21	gi|298674199|ref|YP_003725949.1|	-	1.2e-145	484.6	0.2	1.3e-145	484.5	0.2	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
MukB_hinge	PF16330.5	gi|298674199|ref|YP_003725949.1|	-	0.15	11.8	0.0	0.38	10.4	0.0	1.7	1	0	0	1	1	1	0	MukB	hinge	domain
Shikimate_DH	PF01488.20	gi|298674200|ref|YP_003725950.1|	-	1.1e-41	142.2	0.5	2.4e-41	141.0	0.5	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GlutR_N	PF05201.15	gi|298674200|ref|YP_003725950.1|	-	1.4e-37	128.7	0.1	3.4e-37	127.4	0.1	1.7	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
GlutR_dimer	PF00745.20	gi|298674200|ref|YP_003725950.1|	-	1.3e-21	76.8	1.1	3.2e-21	75.6	1.1	1.7	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
F420_oxidored	PF03807.17	gi|298674200|ref|YP_003725950.1|	-	2.2e-10	41.0	0.1	6.7e-10	39.4	0.1	1.9	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|298674200|ref|YP_003725950.1|	-	8.8e-08	32.5	0.0	2e-07	31.3	0.0	1.6	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|298674200|ref|YP_003725950.1|	-	9.1e-07	28.4	0.3	2.1e-06	27.2	0.1	1.7	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|298674200|ref|YP_003725950.1|	-	2.3e-05	24.7	0.1	8.9e-05	22.9	0.1	2.0	2	0	0	2	2	2	1	Putative	NAD(P)-binding
DFP	PF04127.15	gi|298674200|ref|YP_003725950.1|	-	2.6e-05	24.1	0.1	5.2e-05	23.1	0.1	1.5	1	0	0	1	1	1	1	DNA	/	pantothenate	metabolism	flavoprotein
IlvN	PF07991.12	gi|298674200|ref|YP_003725950.1|	-	3.6e-05	23.4	0.1	0.0025	17.4	0.0	2.3	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
GFO_IDH_MocA	PF01408.22	gi|298674200|ref|YP_003725950.1|	-	5.7e-05	23.9	0.1	0.00016	22.4	0.0	1.8	2	0	0	2	2	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
DapB_N	PF01113.20	gi|298674200|ref|YP_003725950.1|	-	0.0002	21.5	0.1	0.00054	20.1	0.1	1.8	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
THF_DHG_CYH_C	PF02882.19	gi|298674200|ref|YP_003725950.1|	-	0.00076	18.8	0.9	0.1	11.9	0.3	3.1	3	1	0	3	3	3	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Glu_dehyd_C	PF16912.5	gi|298674200|ref|YP_003725950.1|	-	0.0012	18.4	0.1	0.0028	17.2	0.1	1.6	1	0	0	1	1	1	1	Glucose	dehydrogenase	C-terminus
NAD_binding_10	PF13460.6	gi|298674200|ref|YP_003725950.1|	-	0.0028	17.6	0.1	0.0055	16.6	0.1	1.5	1	0	0	1	1	1	1	NAD(P)H-binding
ApbA	PF02558.16	gi|298674200|ref|YP_003725950.1|	-	0.0031	17.2	0.0	0.0067	16.1	0.0	1.7	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
V-ATPase_G	PF03179.15	gi|298674200|ref|YP_003725950.1|	-	0.0065	17.0	4.5	0.15	12.6	0.9	3.2	3	0	0	3	3	3	1	Vacuolar	(H+)-ATPase	G	subunit
AlaDh_PNT_C	PF01262.21	gi|298674200|ref|YP_003725950.1|	-	0.0087	15.4	0.4	0.019	14.2	0.4	1.7	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.18	gi|298674200|ref|YP_003725950.1|	-	0.0098	16.1	1.2	0.047	13.9	0.6	2.5	2	1	0	2	2	2	1	TrkA-N	domain
OCD_Mu_crystall	PF02423.15	gi|298674200|ref|YP_003725950.1|	-	0.015	14.3	0.1	0.026	13.5	0.1	1.3	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
3HCDH_N	PF02737.18	gi|298674200|ref|YP_003725950.1|	-	0.024	14.5	0.1	0.085	12.7	0.1	2.0	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|298674200|ref|YP_003725950.1|	-	0.026	14.8	0.6	0.12	12.6	0.1	2.4	3	0	0	3	3	3	0	Saccharopine	dehydrogenase	NADP	binding	domain
NmrA	PF05368.13	gi|298674200|ref|YP_003725950.1|	-	0.028	14.0	0.1	0.064	12.8	0.1	1.6	1	0	0	1	1	1	0	NmrA-like	family
NAD_Gly3P_dh_N	PF01210.23	gi|298674200|ref|YP_003725950.1|	-	0.055	13.4	0.1	0.41	10.6	0.1	2.3	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Oxidored_nitro	PF00148.19	gi|298674200|ref|YP_003725950.1|	-	0.057	12.1	1.0	0.12	11.1	0.6	1.8	1	1	1	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
SAM_Exu	PF18609.1	gi|298674200|ref|YP_003725950.1|	-	0.12	12.5	0.1	0.44	10.7	0.1	2.1	1	0	0	1	1	1	0	Exuperantia	SAM-like	domain
NAD_binding_7	PF13241.6	gi|298674201|ref|YP_003725951.1|	-	1e-20	74.1	0.6	1.6e-18	67.1	0.1	2.1	2	0	0	2	2	2	2	Putative	NAD(P)-binding
Sirohm_synth_M	PF14824.6	gi|298674201|ref|YP_003725951.1|	-	7.8e-05	22.0	0.1	0.00016	21.1	0.1	1.6	1	0	0	1	1	1	1	Sirohaem	biosynthesis	protein	central
Sacchrp_dh_NADP	PF03435.18	gi|298674201|ref|YP_003725951.1|	-	0.00091	19.5	0.0	0.015	15.6	0.0	2.1	1	1	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
MCR_C	PF04609.12	gi|298674201|ref|YP_003725951.1|	-	0.1	11.6	0.9	0.15	11.1	0.6	1.5	1	1	0	1	1	1	0	Methyl-coenzyme	M	reductase	operon	protein	C
RNase_J_C	PF17770.1	gi|298674201|ref|YP_003725951.1|	-	0.11	13.5	3.1	0.13	13.3	0.1	2.6	3	1	0	3	3	3	0	Ribonuclease	J	C-terminal	domain
AsnC_trans_reg2	PF17805.1	gi|298674202|ref|YP_003725952.1|	-	6.5e-33	112.7	0.1	1.6e-32	111.4	0.0	1.7	2	0	0	2	2	2	1	AsnC-like	ligand	binding	domain
HTH_Crp_2	PF13545.6	gi|298674202|ref|YP_003725952.1|	-	0.00015	21.6	0.0	0.00026	20.9	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_36	PF13730.6	gi|298674202|ref|YP_003725952.1|	-	0.00028	20.8	0.0	0.00063	19.7	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.6	gi|298674202|ref|YP_003725952.1|	-	0.0042	16.5	0.0	0.0096	15.3	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
MarR	PF01047.22	gi|298674202|ref|YP_003725952.1|	-	0.016	15.1	0.0	0.029	14.3	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_24	PF13412.6	gi|298674202|ref|YP_003725952.1|	-	0.016	14.7	0.0	0.072	12.7	0.0	2.0	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_29	PF13551.6	gi|298674202|ref|YP_003725952.1|	-	0.034	14.2	0.0	0.077	13.0	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn	helix
MarR_2	PF12802.7	gi|298674202|ref|YP_003725952.1|	-	0.044	13.7	0.0	0.076	12.9	0.0	1.4	1	0	0	1	1	1	0	MarR	family
TrmB	PF01978.19	gi|298674202|ref|YP_003725952.1|	-	0.077	12.9	0.0	0.42	10.5	0.0	2.1	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_AsnC-type	PF13404.6	gi|298674202|ref|YP_003725952.1|	-	0.085	12.7	0.0	0.28	11.1	0.0	1.9	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
HEPN	PF05168.14	gi|298674202|ref|YP_003725952.1|	-	0.13	12.4	0.0	2.4	8.3	0.0	2.1	1	1	0	2	2	2	0	HEPN	domain
HisG_C	PF08029.11	gi|298674202|ref|YP_003725952.1|	-	0.15	12.2	0.0	0.69	10.1	0.0	1.9	2	0	0	2	2	2	0	HisG,	C-terminal	domain
AsnC_trans_reg2	PF17805.1	gi|298674203|ref|YP_003725953.1|	-	1.4e-23	82.8	0.0	2.8e-23	81.9	0.0	1.5	1	0	0	1	1	1	1	AsnC-like	ligand	binding	domain
HTH_AsnC-type	PF13404.6	gi|298674203|ref|YP_003725953.1|	-	3.4e-10	39.6	0.0	6e-10	38.8	0.0	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.6	gi|298674203|ref|YP_003725953.1|	-	8.9e-05	22.0	2.3	0.00053	19.5	0.9	2.6	2	1	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Sigma70_r4	PF04545.16	gi|298674203|ref|YP_003725953.1|	-	0.0068	15.9	0.7	0.011	15.3	0.1	1.7	2	0	0	2	2	2	1	Sigma-70,	region	4
IF2_N	PF04760.15	gi|298674203|ref|YP_003725953.1|	-	0.012	15.4	0.1	0.058	13.2	0.1	2.2	1	0	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_11	PF08279.12	gi|298674203|ref|YP_003725953.1|	-	0.041	13.8	0.1	0.13	12.2	0.0	1.9	2	0	0	2	2	2	0	HTH	domain
AsnC_trans_reg	PF01037.21	gi|298674203|ref|YP_003725953.1|	-	0.053	13.5	0.0	0.097	12.6	0.0	1.5	1	0	0	1	1	1	0	Lrp/AsnC	ligand	binding	domain
TrmB	PF01978.19	gi|298674203|ref|YP_003725953.1|	-	0.062	13.2	0.1	0.16	11.9	0.0	1.7	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.6	gi|298674203|ref|YP_003725953.1|	-	0.064	13.2	0.0	0.14	12.1	0.0	1.7	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
Sulfolobus_pRN	PF05584.11	gi|298674203|ref|YP_003725953.1|	-	0.097	12.7	0.2	0.34	11.0	0.0	1.8	2	0	0	2	2	2	0	Sulfolobus	plasmid	regulatory	protein
Radical_SAM	PF04055.21	gi|298674204|ref|YP_003725954.1|	-	1.6e-19	70.9	0.1	5.2e-19	69.2	0.0	1.9	2	1	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|298674204|ref|YP_003725954.1|	-	5.6e-10	39.6	0.0	1.1e-09	38.6	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.6	gi|298674204|ref|YP_003725954.1|	-	8.8e-09	35.8	2.4	2.2e-08	34.5	2.4	1.7	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_14	PF13394.6	gi|298674204|ref|YP_003725954.1|	-	1.6e-06	28.2	0.0	3.5e-06	27.1	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
CcmE	PF03100.15	gi|298674205|ref|YP_003725955.1|	-	4.8e-16	58.9	0.0	5.2e-16	58.8	0.0	1.0	1	0	0	1	1	1	1	CcmE
PTCB-BRCT	PF12738.7	gi|298674205|ref|YP_003725955.1|	-	0.035	14.1	0.0	0.06	13.3	0.0	1.4	1	0	0	1	1	1	0	twin	BRCT	domain
polyprenyl_synt	PF00348.17	gi|298674206|ref|YP_003725956.1|	-	1.1e-48	165.5	0.4	1.4e-48	165.2	0.4	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
Radical_SAM	PF04055.21	gi|298674207|ref|YP_003725957.1|	-	1e-13	52.0	0.0	1.4e-13	51.5	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|298674207|ref|YP_003725957.1|	-	8.5e-10	39.0	0.1	2.4e-09	37.6	0.1	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.6	gi|298674207|ref|YP_003725957.1|	-	0.0036	17.6	0.0	0.0067	16.7	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
V-ATPase_G_2	PF16999.5	gi|298674208|ref|YP_003725958.1|	-	2.4e-07	31.1	19.9	2.8e-07	30.9	19.9	1.0	1	0	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
V-ATPase_G	PF03179.15	gi|298674208|ref|YP_003725958.1|	-	1.3e-05	25.7	21.4	1.6e-05	25.4	21.4	1.1	1	0	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
ATP-synt_B	PF00430.18	gi|298674208|ref|YP_003725958.1|	-	0.00016	21.7	26.4	0.00081	19.5	15.4	2.0	1	1	1	2	2	2	2	ATP	synthase	B/B'	CF(0)
Pns11_12	PF17464.2	gi|298674208|ref|YP_003725958.1|	-	0.21	11.3	11.6	0.25	11.0	11.6	1.2	1	0	0	1	1	1	0	Non-structural	protein	11	and	12
DUF883	PF05957.13	gi|298674208|ref|YP_003725958.1|	-	0.72	10.5	11.8	2.1	9.0	4.9	2.1	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
DDHD	PF02862.17	gi|298674208|ref|YP_003725958.1|	-	1.3	9.1	9.7	1.6	8.8	9.7	1.0	1	0	0	1	1	1	0	DDHD	domain
DUF3552	PF12072.8	gi|298674208|ref|YP_003725958.1|	-	1.4	8.3	27.4	0.64	9.4	10.6	3.0	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF3552)
DUF45	PF01863.17	gi|298674208|ref|YP_003725958.1|	-	1.9	8.5	8.6	2.1	8.4	8.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF45
DUF2203	PF09969.9	gi|298674208|ref|YP_003725958.1|	-	2.1	9.1	8.4	2.9	8.6	8.4	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
AAA_13	PF13166.6	gi|298674208|ref|YP_003725958.1|	-	2.9	6.4	19.9	3	6.4	19.9	1.0	1	0	0	1	1	1	0	AAA	domain
DUF2252	PF10009.9	gi|298674208|ref|YP_003725958.1|	-	3.3	6.7	9.0	15	4.5	8.7	1.8	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2252)
SMBP	PF16785.5	gi|298674208|ref|YP_003725958.1|	-	4.6	7.5	15.2	12	6.2	0.8	2.1	1	1	1	2	2	2	0	Small	metal-binding	protein
FAM25	PF15825.5	gi|298674208|ref|YP_003725958.1|	-	6.2	7.2	16.6	7.2	7.0	0.6	2.9	1	1	2	3	3	3	0	FAM25	family
DUF2335	PF10097.9	gi|298674208|ref|YP_003725958.1|	-	7.8	6.5	10.0	7	6.7	0.2	2.8	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2335)
V_ATPase_I	PF01496.19	gi|298674209|ref|YP_003725959.1|	-	2e-27	95.5	11.4	2.1e-19	69.0	0.0	4.0	3	1	0	4	4	4	2	V-type	ATPase	116kDa	subunit	family
Prefoldin_2	PF01920.20	gi|298674209|ref|YP_003725959.1|	-	0.0081	16.1	9.0	0.55	10.2	1.7	2.7	2	0	0	2	2	2	2	Prefoldin	subunit
ABC_tran_CTD	PF16326.5	gi|298674209|ref|YP_003725959.1|	-	0.016	15.5	7.0	0.67	10.2	2.1	3.2	3	0	0	3	3	3	0	ABC	transporter	C-terminal	domain
Osmo_CC	PF08946.10	gi|298674209|ref|YP_003725959.1|	-	0.02	15.1	1.9	0.02	15.1	1.9	2.3	3	0	0	3	3	2	0	Osmosensory	transporter	coiled	coil
Prefoldin	PF02996.17	gi|298674209|ref|YP_003725959.1|	-	0.046	13.6	2.4	1.8	8.5	0.2	2.5	2	0	0	2	2	2	0	Prefoldin	subunit
TOM13	PF08219.11	gi|298674209|ref|YP_003725959.1|	-	0.051	13.6	0.2	0.21	11.5	0.0	2.2	2	0	0	2	2	1	0	Outer	membrane	protein	TOM13
Spc24	PF08286.11	gi|298674209|ref|YP_003725959.1|	-	0.08	13.2	3.8	1.6	9.0	0.3	2.6	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
TBCC_N	PF16752.5	gi|298674209|ref|YP_003725959.1|	-	0.14	12.6	3.5	6.8	7.2	0.3	2.7	3	0	0	3	3	2	0	Tubulin-specific	chaperone	C	N-terminal	domain
NPV_P10	PF05531.12	gi|298674209|ref|YP_003725959.1|	-	0.22	12.0	3.3	6.8	7.2	0.7	3.0	3	0	0	3	3	3	0	Nucleopolyhedrovirus	P10	protein
DUF1664	PF07889.12	gi|298674209|ref|YP_003725959.1|	-	0.26	11.3	3.6	8.1	6.5	1.2	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Vps51	PF08700.11	gi|298674209|ref|YP_003725959.1|	-	0.36	10.9	4.1	0.3	11.2	0.2	2.7	2	1	0	2	2	2	0	Vps51/Vps67
YkyA	PF10368.9	gi|298674209|ref|YP_003725959.1|	-	0.47	10.1	12.6	0.22	11.2	1.8	2.4	2	0	0	2	2	2	0	Putative	cell-wall	binding	lipoprotein
Phage_GP20	PF06810.11	gi|298674209|ref|YP_003725959.1|	-	0.6	9.9	7.1	1.1	9.1	0.3	2.3	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
Sec34	PF04136.15	gi|298674209|ref|YP_003725959.1|	-	0.69	9.8	2.7	6.5	6.6	0.2	2.5	2	0	0	2	2	2	0	Sec34-like	family
GAS	PF13851.6	gi|298674209|ref|YP_003725959.1|	-	1.6	8.1	8.4	0.38	10.1	0.1	2.7	3	0	0	3	3	3	0	Growth-arrest	specific	micro-tubule	binding
Lebercilin	PF15619.6	gi|298674209|ref|YP_003725959.1|	-	2.2	7.9	6.4	6	6.5	0.2	2.3	2	0	0	2	2	2	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
DUF5082	PF16888.5	gi|298674209|ref|YP_003725959.1|	-	2.4	8.4	10.9	18	5.6	0.6	3.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF5082)
Spc7	PF08317.11	gi|298674209|ref|YP_003725959.1|	-	2.7	6.8	7.8	2.5	6.9	1.7	2.1	2	0	0	2	2	2	0	Spc7	kinetochore	protein
BLOC1_2	PF10046.9	gi|298674209|ref|YP_003725959.1|	-	5.2	7.4	9.8	0.55	10.6	0.5	3.1	4	0	0	4	4	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Cauli_AT	PF03233.13	gi|298674209|ref|YP_003725959.1|	-	9.2	6.2	10.2	2.5	8.0	2.9	2.4	1	1	1	2	2	2	0	Aphid	transmission	protein
ATP-synt_C	PF00137.21	gi|298674210|ref|YP_003725960.1|	-	1.3e-16	60.6	11.5	1.6e-16	60.4	11.5	1.1	1	0	0	1	1	1	1	ATP	synthase	subunit	C
vATP-synt_E	PF01991.18	gi|298674211|ref|YP_003725961.1|	-	9.8e-23	80.6	20.5	3.7e-21	75.5	20.5	2.0	1	1	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
ATP-synt_B	PF00430.18	gi|298674211|ref|YP_003725961.1|	-	3.8e-06	27.0	13.6	7e-06	26.2	13.6	1.4	1	0	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
V-ATPase_G_2	PF16999.5	gi|298674211|ref|YP_003725961.1|	-	0.00082	19.7	12.2	0.00082	19.7	12.2	1.8	2	0	0	2	2	2	1	Vacuolar	(H+)-ATPase	G	subunit
DivIVA	PF05103.13	gi|298674211|ref|YP_003725961.1|	-	0.015	15.4	10.2	0.015	15.4	10.2	2.1	1	1	0	2	2	2	0	DivIVA	protein
DUF390	PF04094.14	gi|298674211|ref|YP_003725961.1|	-	0.015	13.7	4.3	0.018	13.4	4.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF390)
DUF3552	PF12072.8	gi|298674211|ref|YP_003725961.1|	-	0.12	11.8	19.4	0.22	10.9	19.4	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
LpxI_N	PF17930.1	gi|298674211|ref|YP_003725961.1|	-	0.15	11.9	1.2	0.28	11.1	1.2	1.4	1	0	0	1	1	1	0	LpxI	N-terminal	domain
HrcA_DNA-bdg	PF03444.15	gi|298674211|ref|YP_003725961.1|	-	0.32	10.7	1.7	1.6	8.4	0.1	2.4	2	0	0	2	2	2	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
eIF3_subunit	PF08597.10	gi|298674211|ref|YP_003725961.1|	-	0.76	9.6	11.3	1.1	9.1	11.3	1.2	1	0	0	1	1	1	0	Translation	initiation	factor	eIF3	subunit
vATP-synt_AC39	PF01992.16	gi|298674212|ref|YP_003725962.1|	-	4.7e-75	253.2	9.1	5.4e-75	253.0	9.1	1.0	1	0	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
UvrD_C	PF13361.6	gi|298674212|ref|YP_003725962.1|	-	0.0072	15.7	3.0	0.015	14.7	3.0	1.5	1	1	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
ATP-synt_F	PF01990.17	gi|298674213|ref|YP_003725963.1|	-	5.9e-16	58.6	0.0	6.7e-16	58.4	0.0	1.0	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
YcgL	PF05166.13	gi|298674213|ref|YP_003725963.1|	-	0.0031	17.8	0.0	0.65	10.4	0.0	2.1	1	1	1	2	2	2	2	YcgL	domain
ParE-like_toxin	PF15781.5	gi|298674213|ref|YP_003725963.1|	-	0.0056	16.6	0.1	0.042	13.8	0.1	2.0	1	1	1	2	2	2	1	ParE-like	toxin	of	type	II	bacterial	toxin-antitoxin	system
BON	PF04972.17	gi|298674213|ref|YP_003725963.1|	-	0.033	14.5	0.3	0.38	11.1	0.3	2.2	1	1	0	1	1	1	0	BON	domain
DUF3475	PF11961.8	gi|298674213|ref|YP_003725963.1|	-	0.15	12.2	0.1	7.8	6.7	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3475)
ATP-synt_ab	PF00006.25	gi|298674214|ref|YP_003725964.1|	-	2.2e-94	315.1	0.0	3.1e-94	314.6	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_Xtn	PF16886.5	gi|298674214|ref|YP_003725964.1|	-	3.3e-43	146.4	0.1	6.2e-43	145.5	0.1	1.5	1	0	0	1	1	1	1	ATPsynthase	alpha/beta	subunit	N-term	extension
ATP-synt_ab_N	PF02874.23	gi|298674214|ref|YP_003725964.1|	-	1.8e-15	57.2	1.1	1.8e-15	57.2	1.1	2.2	3	0	0	3	3	3	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
Peptidase_M23	PF01551.22	gi|298674214|ref|YP_003725964.1|	-	0.02	15.1	0.1	5	7.4	0.0	2.6	2	0	0	2	2	2	0	Peptidase	family	M23
AAA_22	PF13401.6	gi|298674214|ref|YP_003725964.1|	-	0.02	15.1	0.0	0.043	14.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|298674215|ref|YP_003725965.1|	-	5.6e-67	225.5	0.0	7.3e-67	225.1	0.0	1.1	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.23	gi|298674215|ref|YP_003725965.1|	-	1.2e-11	44.9	1.8	1.2e-11	44.9	1.8	1.9	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.10	gi|298674215|ref|YP_003725965.1|	-	1.8e-05	24.8	1.4	3e-05	24.1	0.6	1.8	2	0	0	2	2	2	1	HAS	barrel	domain
ATP-synt_D	PF01813.17	gi|298674216|ref|YP_003725966.1|	-	4.2e-57	193.1	6.9	4.8e-57	193.0	6.9	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
Laminin_I	PF06008.14	gi|298674216|ref|YP_003725966.1|	-	0.027	14.2	2.2	3.9	7.1	0.1	2.1	2	0	0	2	2	2	0	Laminin	Domain	I
Nup188_C	PF18378.1	gi|298674216|ref|YP_003725966.1|	-	0.049	12.5	0.1	0.066	12.0	0.1	1.2	1	0	0	1	1	1	0	Nuclear	pore	protein	NUP188	C-terminal	domain
SMRP1	PF15181.6	gi|298674216|ref|YP_003725966.1|	-	0.16	11.6	0.0	0.22	11.1	0.0	1.2	1	0	0	1	1	1	0	Spermatid-specific	manchette-related	protein	1
DUF5082	PF16888.5	gi|298674216|ref|YP_003725966.1|	-	0.37	11.1	3.6	5.2	7.4	0.1	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF5082)
TRAM	PF01938.20	gi|298674217|ref|YP_003725967.1|	-	1.7e-15	56.7	0.2	1.9e-15	56.6	0.2	1.0	1	0	0	1	1	1	1	TRAM	domain
DEAD	PF00270.29	gi|298674218|ref|YP_003725968.1|	-	3e-54	183.5	0.2	7.8e-54	182.1	0.1	1.7	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|298674218|ref|YP_003725968.1|	-	1.3e-34	118.8	0.1	2.1e-30	105.3	0.0	2.5	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|298674218|ref|YP_003725968.1|	-	2.8e-07	30.7	0.0	5.8e-07	29.7	0.0	1.5	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
CMS1	PF14617.6	gi|298674218|ref|YP_003725968.1|	-	0.00062	19.2	0.0	0.0035	16.7	0.1	2.1	2	0	0	2	2	2	1	U3-containing	90S	pre-ribosomal	complex	subunit
AAA_30	PF13604.6	gi|298674218|ref|YP_003725968.1|	-	0.0025	17.6	0.1	0.0054	16.5	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
Helicase_RecD	PF05127.14	gi|298674218|ref|YP_003725968.1|	-	0.0063	16.4	0.0	0.015	15.1	0.0	1.7	1	0	0	1	1	1	1	Helicase
Flavi_DEAD	PF07652.14	gi|298674218|ref|YP_003725968.1|	-	0.036	14.0	0.1	0.11	12.5	0.1	1.9	1	1	0	1	1	1	0	Flavivirus	DEAD	domain
ERCC3_RAD25_C	PF16203.5	gi|298674218|ref|YP_003725968.1|	-	0.039	13.2	0.0	0.062	12.5	0.0	1.3	1	0	0	1	1	1	0	ERCC3/RAD25/XPB	C-terminal	helicase
3H	PF02829.14	gi|298674218|ref|YP_003725968.1|	-	0.057	13.7	0.7	3.3	8.1	0.0	3.5	2	1	1	3	3	3	0	3H	domain
HTH_3	PF01381.22	gi|298674219|ref|YP_003725969.1|	-	2.2e-11	43.6	0.0	2.5e-11	43.5	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|298674219|ref|YP_003725969.1|	-	0.0038	17.2	0.1	0.0042	17.1	0.1	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|298674219|ref|YP_003725969.1|	-	0.016	15.6	0.0	0.016	15.5	0.0	1.0	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF4367	PF14285.6	gi|298674220|ref|YP_003725970.1|	-	6.9e-11	42.6	1.9	6.9e-11	42.6	1.9	3.0	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4367)
LolA_like	PF17131.4	gi|298674220|ref|YP_003725970.1|	-	3.4e-07	30.2	0.6	1.1e-06	28.5	0.6	1.8	1	1	0	1	1	1	1	Outer	membrane	lipoprotein-sorting	protein
DUF2092	PF09865.9	gi|298674220|ref|YP_003725970.1|	-	0.00038	19.9	0.4	0.0013	18.1	0.4	1.9	1	1	0	1	1	1	1	Predicted	periplasmic	protein	(DUF2092)
LolA	PF03548.15	gi|298674220|ref|YP_003725970.1|	-	0.0098	15.6	0.4	0.021	14.5	0.4	1.6	1	0	0	1	1	1	1	Outer	membrane	lipoprotein	carrier	protein	LolA
DUF5061	PF16587.5	gi|298674220|ref|YP_003725970.1|	-	0.026	14.6	0.0	0.052	13.6	0.0	1.5	1	0	0	1	1	1	0	17	kDa	common-antigen	outer	membrane	protein
PLDc_N	PF13396.6	gi|298674221|ref|YP_003725971.1|	-	1e-13	51.0	1.6	1e-13	51.0	1.6	1.8	2	0	0	2	2	2	1	Phospholipase_D-nuclease	N-terminal
YbjM	PF11045.8	gi|298674221|ref|YP_003725971.1|	-	0.00021	21.4	1.2	0.00027	21.1	1.2	1.2	1	0	0	1	1	1	1	Putative	inner	membrane	protein	of	Enterobacteriaceae
DUF4203	PF13886.6	gi|298674221|ref|YP_003725971.1|	-	0.0013	18.4	3.8	0.0015	18.3	3.8	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4203)
HlyIII	PF03006.20	gi|298674221|ref|YP_003725971.1|	-	0.0022	17.7	0.6	0.0024	17.6	0.6	1.0	1	0	0	1	1	1	1	Haemolysin-III	related
DUF4870	PF09685.10	gi|298674221|ref|YP_003725971.1|	-	0.01	15.9	3.5	0.72	10.0	0.7	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4870)
Ribosomal_S12	PF17487.2	gi|298674221|ref|YP_003725971.1|	-	0.019	15.7	1.7	0.024	15.4	1.7	1.1	1	0	0	1	1	1	0	Ribosomal	protein	S12
DUF2516	PF10724.9	gi|298674221|ref|YP_003725971.1|	-	0.039	14.2	4.1	0.093	13.0	4.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2516)
DUF5368	PF17336.2	gi|298674221|ref|YP_003725971.1|	-	0.29	11.3	4.8	6.9	6.9	1.9	2.0	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5368)
Wzz	PF02706.15	gi|298674221|ref|YP_003725971.1|	-	0.33	11.3	0.1	0.33	11.3	0.1	1.9	2	0	0	2	2	2	0	Chain	length	determinant	protein
LapA_dom	PF06305.11	gi|298674221|ref|YP_003725971.1|	-	0.51	10.2	4.2	21	5.0	0.0	2.1	2	0	0	2	2	2	0	Lipopolysaccharide	assembly	protein	A	domain
Tetraspanin	PF00335.20	gi|298674221|ref|YP_003725971.1|	-	0.98	9.1	4.7	5.8	6.6	6.1	1.5	1	1	1	2	2	2	0	Tetraspanin	family
COX2_TM	PF02790.15	gi|298674221|ref|YP_003725971.1|	-	1.2	9.4	7.2	2.1	8.6	0.1	2.0	1	1	1	2	2	2	0	Cytochrome	C	oxidase	subunit	II,	transmembrane	domain
YebO	PF13974.6	gi|298674221|ref|YP_003725971.1|	-	2.1	8.5	3.7	1.6	8.9	0.2	2.0	2	0	0	2	2	2	0	YebO-like	protein
Glycophorin_A	PF01102.18	gi|298674221|ref|YP_003725971.1|	-	2.5	8.3	7.2	2.1	8.6	0.3	2.0	1	1	1	2	2	2	0	Glycophorin	A
DUF4307	PF14155.6	gi|298674221|ref|YP_003725971.1|	-	2.7	7.8	5.3	14	5.6	0.3	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4307)
DUF2207	PF09972.9	gi|298674221|ref|YP_003725971.1|	-	7.2	5.2	6.2	10	4.7	6.2	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
FeoB_associated	PF12669.7	gi|298674221|ref|YP_003725971.1|	-	8.2	6.9	8.2	2.4	8.6	1.5	2.2	2	0	0	2	2	2	0	FeoB-associated	Cys-rich	membrane	protein
Cation_efflux	PF01545.21	gi|298674222|ref|YP_003725972.1|	-	0.004	16.9	0.2	0.004	16.9	0.2	1.1	1	0	0	1	1	1	1	Cation	efflux	family
DUF3955	PF13127.6	gi|298674222|ref|YP_003725972.1|	-	0.053	13.3	4.2	2.1	8.3	0.2	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
DUF3139	PF11337.8	gi|298674223|ref|YP_003725973.1|	-	0.042	14.5	0.3	0.083	13.6	0.3	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3139)
TxDE	PF18711.1	gi|298674223|ref|YP_003725973.1|	-	0.14	12.3	0.1	0.36	11.0	0.1	1.6	1	0	0	1	1	1	0	Toxoflavin-degrading	enzyme
EF1_GNE	PF00736.19	gi|298674225|ref|YP_003725975.1|	-	6.6e-21	74.3	0.5	7.3e-21	74.2	0.5	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
AMP-binding_C	PF13193.6	gi|298674225|ref|YP_003725975.1|	-	0.044	14.8	0.9	0.32	12.0	0.1	2.1	2	0	0	2	2	2	0	AMP-binding	enzyme	C-terminal	domain
HMA	PF00403.26	gi|298674225|ref|YP_003725975.1|	-	0.082	13.4	1.0	8.1	7.0	0.0	2.2	2	0	0	2	2	2	0	Heavy-metal-associated	domain
GFD1	PF17331.2	gi|298674225|ref|YP_003725975.1|	-	2.3	8.5	7.0	3.7	7.8	7.0	1.3	1	0	0	1	1	1	0	GFD1	mRNA	transport	factor
DUF1610	PF07754.11	gi|298674226|ref|YP_003725976.1|	-	3e-06	27.1	4.2	3e-06	27.1	4.2	2.4	3	0	0	3	3	2	2	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.7	gi|298674226|ref|YP_003725976.1|	-	0.00025	21.0	13.2	0.016	15.2	13.2	2.3	1	1	0	1	1	1	1	Double	zinc	ribbon
tRNA-synt_1g	PF09334.11	gi|298674226|ref|YP_003725976.1|	-	0.0033	16.2	2.5	0.0036	16.1	2.5	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
zinc_ribbon_2	PF13240.6	gi|298674226|ref|YP_003725976.1|	-	0.0061	16.2	15.5	1.5	8.7	0.1	3.9	3	1	0	3	3	3	1	zinc-ribbon	domain
zf-CHY	PF05495.12	gi|298674226|ref|YP_003725976.1|	-	0.007	16.8	9.4	0.067	13.7	5.4	2.0	1	1	1	2	2	2	2	CHY	zinc	finger
RecR	PF02132.15	gi|298674226|ref|YP_003725976.1|	-	0.019	14.5	0.2	0.019	14.5	0.2	2.5	1	1	1	2	2	2	0	RecR	protein
zf-C2HC5	PF06221.13	gi|298674226|ref|YP_003725976.1|	-	0.026	14.5	0.7	0.026	14.5	0.7	2.2	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
zf-HIT	PF04438.16	gi|298674226|ref|YP_003725976.1|	-	0.065	13.1	5.2	0.065	13.1	5.2	2.9	1	1	1	2	2	1	0	HIT	zinc	finger
OrfB_Zn_ribbon	PF07282.11	gi|298674226|ref|YP_003725976.1|	-	0.24	11.4	10.2	1.5	8.8	6.0	2.2	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
YhfH	PF14149.6	gi|298674226|ref|YP_003725976.1|	-	0.24	11.4	0.1	0.24	11.4	0.1	3.0	2	1	1	3	3	2	0	YhfH-like	protein
zinc-ribbons_6	PF07191.12	gi|298674226|ref|YP_003725976.1|	-	0.35	10.9	9.6	2.7	8.1	9.7	1.9	1	1	0	1	1	1	0	zinc-ribbons
zf-Mss51	PF13824.6	gi|298674226|ref|YP_003725976.1|	-	0.47	10.6	11.2	45	4.3	11.2	2.3	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
HypA	PF01155.19	gi|298674226|ref|YP_003725976.1|	-	0.57	10.2	10.7	2.6	8.1	2.7	2.0	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-HYPF	PF07503.12	gi|298674226|ref|YP_003725976.1|	-	0.58	10.0	14.4	1.4	8.8	9.6	2.1	2	0	0	2	2	2	0	HypF	finger
DUF1272	PF06906.11	gi|298674226|ref|YP_003725976.1|	-	0.59	10.3	13.0	8.1	6.6	13.0	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
zf-tcix	PF14952.6	gi|298674226|ref|YP_003725976.1|	-	1.2	8.8	17.3	1.2	8.8	0.1	3.1	1	1	2	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Nudix_N_2	PF14803.6	gi|298674226|ref|YP_003725976.1|	-	1.7	8.6	15.4	1.3	9.0	3.9	3.1	1	1	1	2	2	2	0	Nudix	N-terminal
Rubredoxin_2	PF18073.1	gi|298674226|ref|YP_003725976.1|	-	1.9	8.3	15.5	1.2	9.0	0.3	3.9	3	1	0	3	3	3	0	Rubredoxin	metal	binding	domain
Zn_Tnp_IS91	PF14319.6	gi|298674226|ref|YP_003725976.1|	-	2.1	8.5	9.5	4.3	7.4	9.5	1.6	1	1	0	1	1	1	0	Transposase	zinc-binding	domain
Spt4	PF06093.13	gi|298674226|ref|YP_003725976.1|	-	2.3	8.4	9.6	7.9	6.7	4.3	2.1	1	1	1	2	2	2	0	Spt4/RpoE2	zinc	finger
zf-AN1	PF01428.16	gi|298674226|ref|YP_003725976.1|	-	3	8.1	11.4	5.8	7.2	3.4	2.5	2	1	0	2	2	2	0	AN1-like	Zinc	finger
Zn-ribbon_8	PF09723.10	gi|298674226|ref|YP_003725976.1|	-	3.3	7.9	15.5	12	6.1	0.1	3.2	1	1	2	3	3	3	0	Zinc	ribbon	domain
DUF2752	PF10825.8	gi|298674226|ref|YP_003725976.1|	-	3.5	7.7	8.5	30	4.8	0.2	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2752)
PolC_DP2	PF03833.13	gi|298674226|ref|YP_003725976.1|	-	3.9	5.2	5.4	4.3	5.1	5.4	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
zf-C3HC4	PF00097.25	gi|298674226|ref|YP_003725976.1|	-	6	6.8	13.4	3.5	7.6	1.2	2.2	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-ribbon_3	PF13248.6	gi|298674226|ref|YP_003725976.1|	-	6	6.4	15.9	0.82	9.2	0.7	3.5	4	0	0	4	4	4	0	zinc-ribbon	domain
UPF0547	PF10571.9	gi|298674226|ref|YP_003725976.1|	-	6.6	6.9	13.6	5.9	7.1	0.5	3.4	3	1	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
zf-TFIIB	PF13453.6	gi|298674226|ref|YP_003725976.1|	-	6.8	6.1	14.8	15	5.0	0.1	3.0	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
NMD3	PF04981.13	gi|298674226|ref|YP_003725976.1|	-	7.6	5.9	8.7	9.5	5.6	8.7	1.1	1	0	0	1	1	1	0	NMD3	family
AA_kinase	PF00696.28	gi|298674227|ref|YP_003725977.1|	-	1.3e-09	38.0	0.0	9.7e-07	28.6	0.0	2.1	1	1	1	2	2	2	2	Amino	acid	kinase	family
Cpn60_TCP1	PF00118.24	gi|298674227|ref|YP_003725977.1|	-	0.016	13.8	0.0	0.02	13.5	0.0	1.1	1	0	0	1	1	1	0	TCP-1/cpn60	chaperonin	family
Hydantoinase_A	PF01968.18	gi|298674228|ref|YP_003725978.1|	-	3.3e-29	102.1	0.1	2.8e-28	99.0	0.0	1.9	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase
MutL	PF13941.6	gi|298674228|ref|YP_003725978.1|	-	4.9e-05	22.1	0.0	0.0048	15.6	0.0	2.2	2	0	0	2	2	2	2	MutL	protein
StbA	PF06406.11	gi|298674228|ref|YP_003725978.1|	-	0.00054	19.3	1.5	0.11	11.7	0.2	2.6	2	1	1	3	3	3	2	StbA	protein
SHS2_FTSA	PF02491.20	gi|298674228|ref|YP_003725978.1|	-	0.026	14.9	0.2	0.067	13.6	0.2	1.6	1	0	0	1	1	1	0	SHS2	domain	inserted	in	FTSA
Hydant_A_N	PF05378.13	gi|298674228|ref|YP_003725978.1|	-	0.1	12.3	3.9	2	8.1	0.1	3.1	3	1	0	3	3	3	0	Hydantoinase/oxoprolinase	N-terminal	region
ATP-grasp_3	PF02655.14	gi|298674229|ref|YP_003725979.1|	-	2.4e-38	131.7	0.1	3.4e-38	131.2	0.1	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.13	gi|298674229|ref|YP_003725979.1|	-	2e-06	27.5	0.1	3.1e-06	26.9	0.1	1.2	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
preATP-grasp_3	PF18301.1	gi|298674229|ref|YP_003725979.1|	-	2.3e-05	24.6	0.0	4e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	pre	ATP-grasp	3	domain
ATPgrasp_Ter	PF15632.6	gi|298674229|ref|YP_003725979.1|	-	2.5e-05	24.1	0.0	4.7e-05	23.1	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATPgrasp_ST	PF14397.6	gi|298674229|ref|YP_003725979.1|	-	9.7e-05	21.8	0.0	0.0095	15.2	0.0	2.2	2	0	0	2	2	2	2	Sugar-transfer	associated	ATP-grasp
RimK	PF08443.11	gi|298674229|ref|YP_003725979.1|	-	0.0011	18.7	0.2	0.031	13.9	0.0	2.2	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
TTL	PF03133.15	gi|298674229|ref|YP_003725979.1|	-	0.02	14.0	0.2	2.5	7.2	0.0	2.1	2	0	0	2	2	2	0	Tubulin-tyrosine	ligase	family
Acyl_transf_3	PF01757.22	gi|298674230|ref|YP_003725980.1|	-	0.0026	16.9	8.8	0.0031	16.6	8.8	1.0	1	0	0	1	1	1	1	Acyltransferase	family
Peptidase_U4	PF03419.13	gi|298674230|ref|YP_003725980.1|	-	0.63	9.3	14.7	0.16	11.2	4.7	2.0	1	1	1	2	2	2	0	Sporulation	factor	SpoIIGA
GrpE	PF01025.19	gi|298674231|ref|YP_003725981.1|	-	3.4e-55	186.2	7.9	5e-55	185.7	7.9	1.3	1	0	0	1	1	1	1	GrpE
CLZ	PF16526.5	gi|298674231|ref|YP_003725981.1|	-	0.00045	20.5	3.0	0.0013	19.0	3.0	1.9	1	0	0	1	1	1	1	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
Lge1	PF11488.8	gi|298674231|ref|YP_003725981.1|	-	0.0066	16.6	6.9	0.0079	16.4	5.4	1.9	1	1	1	2	2	2	1	Transcriptional	regulatory	protein	LGE1
TSC22	PF01166.18	gi|298674231|ref|YP_003725981.1|	-	0.018	15.4	1.6	0.018	15.4	1.6	1.9	2	0	0	2	2	1	0	TSC-22/dip/bun	family
Bap31_Bap29_C	PF18035.1	gi|298674231|ref|YP_003725981.1|	-	0.021	14.8	6.8	0.047	13.7	6.8	1.7	1	0	0	1	1	1	0	Bap31/Bap29	cytoplasmic	coiled-coil	domain
DUF4407	PF14362.6	gi|298674231|ref|YP_003725981.1|	-	0.022	14.1	3.3	0.022	14.1	3.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
KIP1	PF07765.12	gi|298674231|ref|YP_003725981.1|	-	0.065	13.4	4.0	0.19	11.9	1.0	2.7	2	1	0	2	2	2	0	KIP1-like	protein
Atg14	PF10186.9	gi|298674231|ref|YP_003725981.1|	-	0.13	11.4	4.2	0.16	11.0	4.2	1.2	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Hema_stalk	PF08720.10	gi|298674231|ref|YP_003725981.1|	-	0.17	11.6	1.2	0.28	10.9	1.2	1.3	1	0	0	1	1	1	0	Influenza	C	hemagglutinin	stalk
Tho2	PF11262.8	gi|298674231|ref|YP_003725981.1|	-	0.22	10.7	10.4	1.4	8.1	10.9	1.9	1	1	1	2	2	2	0	Transcription	factor/nuclear	export	subunit	protein	2
Enkurin	PF13864.6	gi|298674231|ref|YP_003725981.1|	-	0.27	11.7	12.0	0.034	14.6	7.0	2.1	2	0	0	2	2	2	0	Calmodulin-binding
DivIC	PF04977.15	gi|298674231|ref|YP_003725981.1|	-	0.54	10.1	10.0	0.18	11.6	5.9	2.2	1	1	1	2	2	2	0	Septum	formation	initiator
UPF0242	PF06785.11	gi|298674231|ref|YP_003725981.1|	-	2.7	8.0	13.4	1.1	9.3	10.4	1.6	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
DUF573	PF04504.14	gi|298674231|ref|YP_003725981.1|	-	8	7.2	7.9	0.37	11.5	1.4	2.2	2	1	1	3	3	2	0	Protein	of	unknown	function,	DUF573
YabA	PF06156.13	gi|298674231|ref|YP_003725981.1|	-	8.9	7.0	11.2	3.5	8.3	7.8	2.4	1	1	1	2	2	2	0	Initiation	control	protein	YabA
Ax_dynein_light	PF10211.9	gi|298674231|ref|YP_003725981.1|	-	9	6.2	14.0	0.57	10.1	7.9	2.1	1	1	1	2	2	2	0	Axonemal	dynein	light	chain
HSP70	PF00012.20	gi|298674232|ref|YP_003725982.1|	-	1.5e-246	819.3	23.0	1.2e-244	813.0	23.0	2.0	1	1	0	1	1	1	1	Hsp70	protein
MreB_Mbl	PF06723.13	gi|298674232|ref|YP_003725982.1|	-	2.7e-20	72.4	2.3	2.7e-20	72.4	2.3	2.1	2	1	0	2	2	2	1	MreB/Mbl	protein
FGGY_C	PF02782.16	gi|298674232|ref|YP_003725982.1|	-	0.037	13.8	0.1	0.096	12.4	0.1	1.6	1	0	0	1	1	1	0	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
Raco_middle	PF17651.1	gi|298674232|ref|YP_003725982.1|	-	0.049	13.3	0.0	0.049	13.3	0.0	3.2	4	0	0	4	4	4	0	RACo	middle	region
DUF3347	PF11827.8	gi|298674232|ref|YP_003725982.1|	-	0.086	13.0	21.0	1.1	9.5	15.1	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3347)
FtsA	PF14450.6	gi|298674232|ref|YP_003725982.1|	-	0.11	13.0	19.0	0.64	10.5	0.8	4.4	3	3	1	4	4	4	0	Cell	division	protein	FtsA
Emaravirus_P4	PF16505.5	gi|298674232|ref|YP_003725982.1|	-	0.15	11.0	4.3	0.3	10.1	4.3	1.4	1	0	0	1	1	1	0	P4	movement	protein	of	Emaravirus,	and	the	30K	superfamily
Vfa1	PF08432.10	gi|298674232|ref|YP_003725982.1|	-	2.6	8.3	22.5	0.59	10.4	18.6	1.9	2	0	0	2	2	2	0	AAA-ATPase	Vps4-associated	protein	1
DnaJ_C	PF01556.18	gi|298674233|ref|YP_003725983.1|	-	8.6e-42	142.7	0.0	1.1e-41	142.4	0.0	1.1	1	0	0	1	1	1	1	DnaJ	C	terminal	domain
DnaJ	PF00226.31	gi|298674233|ref|YP_003725983.1|	-	1.4e-30	105.1	5.3	2e-30	104.7	4.0	2.0	2	0	0	2	2	2	1	DnaJ	domain
DnaJ_CXXCXGXG	PF00684.19	gi|298674233|ref|YP_003725983.1|	-	7.6e-13	48.6	17.2	1.5e-12	47.7	17.2	1.5	1	0	0	1	1	1	1	DnaJ	central	domain
Anti-TRAP	PF15777.5	gi|298674233|ref|YP_003725983.1|	-	0.00027	20.9	18.1	0.027	14.4	5.8	2.4	1	1	1	2	2	2	2	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
Lar_restr_allev	PF14354.6	gi|298674233|ref|YP_003725983.1|	-	0.047	14.1	5.6	1.3	9.4	0.7	2.6	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
Octopine_DH	PF02317.17	gi|298674233|ref|YP_003725983.1|	-	0.09	12.9	0.1	0.16	12.0	0.1	1.3	1	0	0	1	1	1	0	NAD/NADP	octopine/nopaline	dehydrogenase,	alpha-helical	domain
Cytochrom_CIII	PF02085.16	gi|298674233|ref|YP_003725983.1|	-	0.16	12.3	1.8	0.35	11.2	1.8	1.5	1	0	0	1	1	1	0	Class	III	cytochrome	C	family
Cytochrom_c3_2	PF14537.6	gi|298674233|ref|YP_003725983.1|	-	0.3	11.6	3.1	0.73	10.3	3.1	1.7	1	0	0	1	1	1	0	Cytochrome	c3
zf-C3HC4_3	PF13920.6	gi|298674233|ref|YP_003725983.1|	-	3.5	7.6	5.8	15	5.5	0.3	2.2	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
HypA	PF01155.19	gi|298674233|ref|YP_003725983.1|	-	4.2	7.4	11.5	1.6	8.8	1.9	2.3	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
TrkA_N	PF02254.18	gi|298674234|ref|YP_003725984.1|	-	4.5e-49	165.5	3.5	5.9e-24	84.6	0.1	2.3	2	0	0	2	2	2	2	TrkA-N	domain
TrkA_C	PF02080.21	gi|298674234|ref|YP_003725984.1|	-	2.8e-32	110.3	0.5	2.1e-15	56.3	0.0	2.8	2	0	0	2	2	2	2	TrkA-C	domain
Shikimate_DH	PF01488.20	gi|298674234|ref|YP_003725984.1|	-	2.3e-12	47.2	3.6	1.5e-08	34.8	0.6	2.3	2	0	0	2	2	2	2	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.6	gi|298674234|ref|YP_003725984.1|	-	5.1e-10	39.7	3.2	0.00049	20.5	0.3	2.6	2	0	0	2	2	2	2	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|298674234|ref|YP_003725984.1|	-	1.1e-09	37.9	4.1	0.00024	20.5	0.2	2.4	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
F420_oxidored	PF03807.17	gi|298674234|ref|YP_003725984.1|	-	1e-08	35.6	2.1	0.0039	17.8	0.2	3.4	3	2	0	3	3	3	2	NADP	oxidoreductase	coenzyme	F420-dependent
Sacchrp_dh_NADP	PF03435.18	gi|298674234|ref|YP_003725984.1|	-	1.7e-08	34.8	3.5	2.2e-05	24.7	0.6	2.7	2	0	0	2	2	2	2	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_10	PF13460.6	gi|298674234|ref|YP_003725984.1|	-	9.4e-08	32.1	0.7	0.012	15.5	0.1	2.3	2	0	0	2	2	2	2	NAD(P)H-binding
NAD_Gly3P_dh_N	PF01210.23	gi|298674234|ref|YP_003725984.1|	-	1.6e-07	31.4	0.1	0.0075	16.2	0.0	2.5	2	0	0	2	2	2	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.18	gi|298674234|ref|YP_003725984.1|	-	2.3e-06	27.6	0.6	0.066	13.1	0.1	2.6	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|298674234|ref|YP_003725984.1|	-	3.4e-06	27.5	3.3	0.013	16.1	0.4	3.2	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|298674234|ref|YP_003725984.1|	-	4.1e-06	26.2	1.1	0.0037	16.5	0.1	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|298674234|ref|YP_003725984.1|	-	6e-06	25.7	0.0	0.02	14.1	0.0	2.2	2	0	0	2	2	2	2	FAD	binding	domain
NAD_binding_2	PF03446.15	gi|298674234|ref|YP_003725984.1|	-	0.00011	22.5	1.0	0.46	10.6	0.0	3.2	2	1	1	3	3	3	2	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ApbA	PF02558.16	gi|298674234|ref|YP_003725984.1|	-	0.00017	21.3	0.1	0.0018	17.9	0.0	2.2	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
DAO	PF01266.24	gi|298674234|ref|YP_003725984.1|	-	0.00024	20.8	0.2	0.015	14.9	0.0	2.3	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|298674234|ref|YP_003725984.1|	-	0.00037	19.3	0.6	0.043	12.5	0.2	2.2	2	0	0	2	2	2	1	HI0933-like	protein
XdhC_C	PF13478.6	gi|298674234|ref|YP_003725984.1|	-	0.00039	20.9	0.1	0.038	14.5	0.0	2.5	2	0	0	2	2	2	1	XdhC	Rossmann	domain
2-Hacid_dh_C	PF02826.19	gi|298674234|ref|YP_003725984.1|	-	0.0012	18.2	1.0	0.34	10.2	0.2	2.4	2	0	0	2	2	2	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|298674234|ref|YP_003725984.1|	-	0.0013	18.3	5.8	0.16	11.5	0.2	3.3	2	1	0	3	3	3	2	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NmrA	PF05368.13	gi|298674234|ref|YP_003725984.1|	-	0.0029	17.2	3.8	0.81	9.2	0.4	2.3	2	0	0	2	2	2	2	NmrA-like	family
Pyr_redox_3	PF13738.6	gi|298674234|ref|YP_003725984.1|	-	0.012	14.8	4.0	0.7	9.1	0.6	2.4	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Castor_Poll_mid	PF06241.12	gi|298674234|ref|YP_003725984.1|	-	0.015	15.3	0.1	4.2	7.4	0.0	2.7	2	0	0	2	2	2	0	Castor	and	Pollux,	part	of	voltage-gated	ion	channel
PglD_N	PF17836.1	gi|298674234|ref|YP_003725984.1|	-	0.015	15.9	5.2	0.21	12.3	0.4	2.8	2	0	0	2	2	2	0	PglD	N-terminal	domain
AdoHcyase_NAD	PF00670.21	gi|298674234|ref|YP_003725984.1|	-	0.016	15.3	5.4	0.026	14.6	0.6	2.7	2	1	1	3	3	3	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Thi4	PF01946.17	gi|298674234|ref|YP_003725984.1|	-	0.022	14.0	2.3	1	8.5	0.1	3.0	3	0	0	3	3	3	0	Thi4	family
Spermine_synth	PF01564.17	gi|298674234|ref|YP_003725984.1|	-	0.05	13.0	2.3	0.22	10.9	1.4	2.3	2	0	0	2	2	2	0	Spermine/spermidine	synthase	domain
DUF2325	PF10087.9	gi|298674234|ref|YP_003725984.1|	-	0.06	13.5	1.0	2.3	8.4	0.2	2.8	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2325)
Lycopene_cycl	PF05834.12	gi|298674234|ref|YP_003725984.1|	-	0.064	12.3	0.1	1.8	7.5	0.0	2.1	2	0	0	2	2	2	0	Lycopene	cyclase	protein
NAD_binding_8	PF13450.6	gi|298674234|ref|YP_003725984.1|	-	0.11	12.7	0.1	3.2	8.1	0.1	2.5	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
ThiS	PF02597.20	gi|298674234|ref|YP_003725984.1|	-	0.58	10.8	3.3	7.3	7.3	0.0	3.7	4	1	0	4	4	4	0	ThiS	family
TrkH	PF02386.16	gi|298674235|ref|YP_003725985.1|	-	1e-61	208.9	18.1	5.3e-60	203.3	18.1	2.0	1	1	0	1	1	1	1	Cation	transport	protein
FAD_binding_3	PF01494.19	gi|298674236|ref|YP_003725986.1|	-	5.5e-14	52.2	0.7	1.8e-10	40.6	0.2	2.9	2	1	0	2	2	2	2	FAD	binding	domain
FAD_binding_2	PF00890.24	gi|298674236|ref|YP_003725986.1|	-	2e-10	40.4	0.8	9.3e-07	28.3	0.5	2.2	2	0	0	2	2	2	2	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|298674236|ref|YP_003725986.1|	-	2.9e-09	36.8	1.6	1.3e-08	34.6	1.6	1.9	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|298674236|ref|YP_003725986.1|	-	3.6e-08	32.5	0.3	1.4e-07	30.6	0.0	1.9	2	0	0	2	2	2	1	HI0933-like	protein
NAD_binding_8	PF13450.6	gi|298674236|ref|YP_003725986.1|	-	3.5e-07	30.3	0.0	9.2e-07	29.0	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.14	gi|298674236|ref|YP_003725986.1|	-	2.2e-06	27.2	0.6	2.2e-06	27.2	0.6	2.1	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.12	gi|298674236|ref|YP_003725986.1|	-	7.5e-06	25.2	0.0	0.0077	15.3	0.1	2.2	2	0	0	2	2	2	2	Lycopene	cyclase	protein
GIDA	PF01134.22	gi|298674236|ref|YP_003725986.1|	-	1.4e-05	24.4	1.1	2.7e-05	23.4	1.1	1.6	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
DAO	PF01266.24	gi|298674236|ref|YP_003725986.1|	-	6.1e-05	22.8	0.3	0.011	15.4	0.2	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|298674236|ref|YP_003725986.1|	-	7.8e-05	22.0	0.1	0.00016	21.0	0.1	1.4	1	0	0	1	1	1	1	Thi4	family
Trp_halogenase	PF04820.14	gi|298674236|ref|YP_003725986.1|	-	0.00012	21.1	0.3	0.13	11.1	0.1	2.5	2	1	0	2	2	2	2	Tryptophan	halogenase
Pyr_redox_3	PF13738.6	gi|298674236|ref|YP_003725986.1|	-	0.0069	15.7	0.4	0.011	15.0	0.4	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|298674236|ref|YP_003725986.1|	-	0.081	12.2	0.1	0.19	11.0	0.1	1.6	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.18	gi|298674236|ref|YP_003725986.1|	-	0.15	11.9	0.2	0.36	10.7	0.2	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
SE	PF08491.10	gi|298674236|ref|YP_003725986.1|	-	0.22	10.5	1.0	0.7	8.9	1.0	1.8	1	1	0	1	1	1	0	Squalene	epoxidase
Pyr_redox	PF00070.27	gi|298674236|ref|YP_003725986.1|	-	1.6	9.3	6.1	0.81	10.3	0.2	2.9	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4	PF00037.27	gi|298674237|ref|YP_003725987.1|	-	8.9e-16	57.0	17.5	2.2e-08	33.6	5.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674237|ref|YP_003725987.1|	-	4.2e-13	49.7	35.8	1.8e-07	31.6	13.6	2.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298674237|ref|YP_003725987.1|	-	2.6e-11	43.1	13.5	2.1e-06	27.6	4.1	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|298674237|ref|YP_003725987.1|	-	5.2e-10	40.1	10.1	5.9e-05	23.9	0.7	2.1	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|298674237|ref|YP_003725987.1|	-	3.2e-09	36.8	10.4	8.7e-09	35.4	10.4	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298674237|ref|YP_003725987.1|	-	3.9e-09	36.5	24.2	6.2e-06	26.2	13.6	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674237|ref|YP_003725987.1|	-	6.4e-09	35.8	21.7	8.1e-07	29.1	12.2	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674237|ref|YP_003725987.1|	-	7.5e-08	32.0	12.9	0.00034	20.5	2.3	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|298674237|ref|YP_003725987.1|	-	2.7e-06	27.9	21.1	0.00054	20.7	6.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|298674237|ref|YP_003725987.1|	-	1.2e-05	25.4	12.8	0.00062	20.1	3.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298674237|ref|YP_003725987.1|	-	3.1e-05	24.3	13.0	0.005	17.3	2.5	2.1	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298674237|ref|YP_003725987.1|	-	6.3e-05	23.4	8.7	0.026	15.0	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|298674237|ref|YP_003725987.1|	-	0.00076	20.0	12.7	0.013	16.0	2.0	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298674237|ref|YP_003725987.1|	-	0.0035	18.0	14.1	0.18	12.5	1.0	3.0	1	1	2	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.6	gi|298674237|ref|YP_003725987.1|	-	0.0062	16.7	10.9	0.073	13.3	1.8	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298674237|ref|YP_003725987.1|	-	0.075	13.9	2.8	0.075	13.9	2.8	2.0	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_19	PF06902.11	gi|298674237|ref|YP_003725987.1|	-	0.73	10.0	8.6	2.2	8.4	0.2	3.1	2	2	2	4	4	4	0	Divergent	4Fe-4S	mono-cluster
Desulfoferrod_N	PF06397.12	gi|298674237|ref|YP_003725987.1|	-	1.7	8.4	17.2	0.064	12.9	5.4	2.1	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
zf-C2H2_11	PF16622.5	gi|298674237|ref|YP_003725987.1|	-	2.3	8.1	8.1	3.9	7.3	1.2	2.2	2	0	0	2	2	2	0	zinc-finger	C2H2-type
CofC	PF01983.16	gi|298674238|ref|YP_003725988.1|	-	3.4e-52	176.8	3.1	4e-52	176.5	3.1	1.0	1	0	0	1	1	1	1	Guanylyl	transferase	CofC	like
NTP_transf_3	PF12804.7	gi|298674238|ref|YP_003725988.1|	-	1.6e-05	25.3	0.0	2e-05	25.0	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
DUF2064	PF09837.9	gi|298674238|ref|YP_003725988.1|	-	0.045	13.6	0.0	0.072	12.9	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2064)
Radical_SAM	PF04055.21	gi|298674239|ref|YP_003725989.1|	-	5.6e-15	56.1	0.1	8.1e-15	55.6	0.1	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|298674239|ref|YP_003725989.1|	-	0.039	14.1	0.4	0.09	12.9	0.4	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.21	gi|298674240|ref|YP_003725990.1|	-	8.1e-15	55.6	0.0	1.7e-14	54.5	0.0	1.6	1	1	0	1	1	1	1	Radical	SAM	superfamily
Amino_oxidase	PF01593.24	gi|298674241|ref|YP_003725991.1|	-	7.3e-21	75.0	0.0	9.5e-21	74.6	0.0	1.1	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.6	gi|298674241|ref|YP_003725991.1|	-	1.4e-12	47.7	0.1	3.2e-12	46.5	0.1	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.14	gi|298674241|ref|YP_003725991.1|	-	9.4e-09	34.9	0.1	0.0017	17.7	0.0	3.2	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|298674241|ref|YP_003725991.1|	-	6.4e-07	28.8	0.0	0.00037	19.7	0.0	2.8	3	0	0	3	3	3	2	FAD	binding	domain
DAO	PF01266.24	gi|298674241|ref|YP_003725991.1|	-	1e-05	25.3	0.3	0.00017	21.3	0.3	2.1	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.27	gi|298674241|ref|YP_003725991.1|	-	4.1e-05	24.1	1.9	0.12	13.0	0.1	3.0	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|298674241|ref|YP_003725991.1|	-	0.00097	17.9	0.0	0.09	11.5	0.0	2.3	2	0	0	2	2	2	1	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|298674241|ref|YP_003725991.1|	-	0.0065	15.9	0.0	0.037	13.4	0.0	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
MCRA	PF06100.11	gi|298674241|ref|YP_003725991.1|	-	0.0087	14.9	0.0	0.015	14.2	0.0	1.4	1	0	0	1	1	1	1	MCRA	family
FAD_binding_3	PF01494.19	gi|298674241|ref|YP_003725991.1|	-	0.066	12.5	0.1	0.15	11.2	0.1	1.6	2	0	0	2	2	2	0	FAD	binding	domain
GIDA	PF01134.22	gi|298674241|ref|YP_003725991.1|	-	0.078	12.0	0.6	0.41	9.7	0.0	2.1	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|298674241|ref|YP_003725991.1|	-	0.1	11.8	0.3	0.77	9.0	0.1	2.2	2	0	0	2	2	2	0	Thi4	family
Fer4	PF00037.27	gi|298674242|ref|YP_003725992.1|	-	1.9e-12	46.4	13.9	2.8e-07	30.1	4.2	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298674242|ref|YP_003725992.1|	-	1.7e-08	34.4	13.1	2.4e-08	34.0	13.1	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298674242|ref|YP_003725992.1|	-	1.1e-07	32.4	13.5	2.2e-05	25.0	14.2	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298674242|ref|YP_003725992.1|	-	2.9e-07	30.5	13.9	0.00016	21.9	3.1	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|298674242|ref|YP_003725992.1|	-	1.6e-06	27.8	12.4	0.0012	18.8	2.1	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298674242|ref|YP_003725992.1|	-	5.9e-06	26.3	15.4	0.0025	18.0	4.7	2.0	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674242|ref|YP_003725992.1|	-	1.1e-05	26.3	13.1	0.013	16.4	3.0	2.0	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|298674242|ref|YP_003725992.1|	-	1.6e-05	24.8	15.4	0.00063	19.7	5.3	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298674242|ref|YP_003725992.1|	-	0.0011	19.5	15.3	0.035	14.6	3.4	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298674242|ref|YP_003725992.1|	-	0.0017	18.8	15.5	4.9	7.7	15.5	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298674242|ref|YP_003725992.1|	-	0.0021	18.1	16.3	0.015	15.4	16.9	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298674242|ref|YP_003725992.1|	-	0.0079	17.1	16.3	0.37	11.9	5.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|298674242|ref|YP_003725992.1|	-	0.0086	16.9	10.8	0.063	14.1	2.8	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298674242|ref|YP_003725992.1|	-	0.1	13.2	15.7	0.34	11.5	3.9	2.3	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|298674242|ref|YP_003725992.1|	-	1.3	9.3	12.4	0.73	10.0	1.7	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298674242|ref|YP_003725992.1|	-	2.5	8.9	14.4	0.24	12.2	3.5	2.6	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
DUF22	PF01629.16	gi|298674243|ref|YP_003725993.1|	-	1e-36	124.8	1.0	1.2e-36	124.6	1.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF22
MUG113	PF13455.6	gi|298674244|ref|YP_003725994.1|	-	0.096	13.4	1.0	0.22	12.2	1.0	1.8	1	1	0	1	1	1	0	Meiotically	up-regulated	gene	113
GEMIN8	PF15348.6	gi|298674244|ref|YP_003725994.1|	-	0.11	12.8	2.6	0.092	13.0	1.0	1.7	2	0	0	2	2	2	0	Gemini	of	Cajal	bodies-associated	protein	8
DUF4428	PF14471.6	gi|298674244|ref|YP_003725994.1|	-	0.25	11.3	6.5	1.5	8.8	1.9	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
Arc_trans_TRASH	PF08394.10	gi|298674244|ref|YP_003725994.1|	-	1.5	9.3	13.3	0.15	12.4	3.8	2.9	3	0	0	3	3	3	0	Archaeal	TRASH	domain
TF_Zn_Ribbon	PF08271.12	gi|298674244|ref|YP_003725994.1|	-	6.7	6.3	14.9	15	5.2	5.9	3.3	2	1	0	2	2	2	0	TFIIB	zinc-binding
Oxidored_q4	PF00507.19	gi|298674245|ref|YP_003725995.1|	-	1.4e-35	121.4	0.8	1.4e-35	121.4	0.8	1.4	2	0	0	2	2	2	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
DUF973	PF06157.11	gi|298674245|ref|YP_003725995.1|	-	0.011	14.8	3.5	0.014	14.5	3.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
Oxidored_q6	PF01058.22	gi|298674246|ref|YP_003725996.1|	-	5.4e-24	84.5	0.1	7.7e-24	84.0	0.1	1.3	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Complex1_30kDa	PF00329.19	gi|298674247|ref|YP_003725997.1|	-	1.5e-36	125.7	0.1	2.1e-36	125.2	0.1	1.2	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
RNase_H_2	PF13482.6	gi|298674247|ref|YP_003725997.1|	-	0.052	13.5	0.2	0.07	13.1	0.2	1.1	1	0	0	1	1	1	0	RNase_H	superfamily
Complex1_49kDa	PF00346.19	gi|298674248|ref|YP_003725998.1|	-	3.1e-89	298.7	0.1	1.4e-87	293.3	0.1	2.1	1	1	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.19	gi|298674248|ref|YP_003725998.1|	-	3.6e-06	26.1	0.0	5.8e-06	25.5	0.0	1.3	1	0	0	1	1	1	1	Nickel-dependent	hydrogenase
NADHdh	PF00146.21	gi|298674249|ref|YP_003725999.1|	-	6.7e-106	353.9	24.4	8.1e-106	353.7	24.4	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
PEN-2	PF10251.9	gi|298674249|ref|YP_003725999.1|	-	0.11	12.9	1.9	5	7.6	0.1	3.3	3	0	0	3	3	3	0	Presenilin	enhancer-2	subunit	of	gamma	secretase
Fer4	PF00037.27	gi|298674250|ref|YP_003726000.1|	-	2.9e-15	55.4	16.1	3.7e-09	36.0	4.0	2.6	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674250|ref|YP_003726000.1|	-	3.7e-12	46.6	7.8	6.8e-12	45.8	7.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674250|ref|YP_003726000.1|	-	3.9e-11	42.9	19.4	7e-09	35.7	8.5	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674250|ref|YP_003726000.1|	-	3.6e-10	40.6	4.0	0.00018	22.4	1.2	2.4	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|298674250|ref|YP_003726000.1|	-	3.9e-10	39.7	6.4	3.9e-10	39.7	6.4	1.8	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298674250|ref|YP_003726000.1|	-	5.7e-08	32.8	10.5	6.4e-08	32.6	9.5	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674250|ref|YP_003726000.1|	-	2.2e-07	30.5	8.5	4.7e-05	23.2	1.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298674250|ref|YP_003726000.1|	-	4.9e-07	30.1	8.0	2.4e-06	27.9	8.4	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298674250|ref|YP_003726000.1|	-	1.9e-05	24.8	9.1	0.0032	17.8	1.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298674250|ref|YP_003726000.1|	-	3.9e-05	23.5	4.0	3.9e-05	23.5	4.0	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298674250|ref|YP_003726000.1|	-	0.00015	22.3	11.6	0.0025	18.3	11.1	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298674250|ref|YP_003726000.1|	-	0.00027	21.7	8.8	0.052	14.4	2.2	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298674250|ref|YP_003726000.1|	-	0.0011	19.6	9.9	0.0086	16.8	0.6	2.7	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|298674250|ref|YP_003726000.1|	-	0.0014	19.1	11.9	0.0022	18.5	2.5	2.5	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|298674250|ref|YP_003726000.1|	-	0.0035	18.2	19.4	0.054	14.4	3.3	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|298674250|ref|YP_003726000.1|	-	0.056	13.6	9.5	7.5	6.8	9.5	2.3	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Oxidored_q3	PF00499.20	gi|298674251|ref|YP_003726001.1|	-	2.9e-21	75.7	9.5	2.9e-21	75.7	9.5	1.6	1	1	1	2	2	2	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
DUF4040	PF13244.6	gi|298674251|ref|YP_003726001.1|	-	0.084	13.0	15.8	0.042	14.0	13.5	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4040)
Peptidase_U4	PF03419.13	gi|298674251|ref|YP_003726001.1|	-	1.2	8.3	7.7	1.4	8.1	7.7	1.0	1	0	0	1	1	1	0	Sporulation	factor	SpoIIGA
Oxidored_q3	PF00499.20	gi|298674252|ref|YP_003726002.1|	-	4.6e-12	45.9	2.1	5.4e-12	45.6	2.1	1.1	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
Ion_trans	PF00520.31	gi|298674252|ref|YP_003726002.1|	-	0.063	12.5	0.1	0.086	12.1	0.1	1.3	1	1	0	1	1	1	0	Ion	transport	protein
CBP_BcsF	PF11120.8	gi|298674252|ref|YP_003726002.1|	-	0.12	12.5	2.4	0.56	10.4	0.4	2.0	2	0	0	2	2	2	0	Cellulose	biosynthesis	protein	BcsF
TadE	PF07811.12	gi|298674252|ref|YP_003726002.1|	-	0.34	11.2	4.9	1.3	9.4	1.0	2.1	2	0	0	2	2	2	0	TadE-like	protein
Oxidored_q2	PF00420.24	gi|298674253|ref|YP_003726003.1|	-	3.1e-23	81.4	5.6	3.4e-23	81.3	5.6	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
BMC	PF00936.19	gi|298674253|ref|YP_003726003.1|	-	0.011	15.7	0.1	0.015	15.3	0.1	1.1	1	0	0	1	1	1	0	BMC	domain
VIT_2	PF13757.6	gi|298674253|ref|YP_003726003.1|	-	0.1	12.5	0.0	0.12	12.3	0.0	1.2	1	0	0	1	1	1	0	Vault	protein	inter-alpha-trypsin	domain
Proton_antipo_M	PF00361.20	gi|298674254|ref|YP_003726004.1|	-	4.3e-75	252.7	25.7	4.3e-75	252.7	25.7	2.1	2	0	0	2	2	2	1	Proton-conducting	membrane	transporter
Proton_antipo_N	PF00662.20	gi|298674254|ref|YP_003726004.1|	-	2.9e-18	65.7	0.4	2.9e-18	65.7	0.4	4.2	4	0	0	4	4	4	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Proton_antipo_C	PF01010.19	gi|298674254|ref|YP_003726004.1|	-	0.012	15.2	2.8	0.029	14.0	2.8	1.6	1	1	0	1	1	1	0	NADH-dehyrogenase	subunit	F,	TMs,	(complex	I)	C-terminus
SLATT_5	PF18160.1	gi|298674254|ref|YP_003726004.1|	-	0.12	11.7	0.2	0.67	9.3	0.2	2.3	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	5
Proton_antipo_M	PF00361.20	gi|298674255|ref|YP_003726005.1|	-	5.3e-64	216.2	29.9	5.3e-64	216.2	29.9	2.1	2	0	0	2	2	2	1	Proton-conducting	membrane	transporter
Oxidored_q5_N	PF01059.17	gi|298674255|ref|YP_003726005.1|	-	0.0086	16.2	6.3	0.0086	16.2	6.3	5.4	4	3	1	5	5	5	1	NADH-ubiquinone	oxidoreductase	chain	4,	amino	terminus
ERGIC_N	PF13850.6	gi|298674255|ref|YP_003726005.1|	-	0.36	11.2	3.3	0.47	10.8	0.2	2.8	3	0	0	3	3	3	0	Endoplasmic	Reticulum-Golgi	Intermediate	Compartment	(ERGIC)
Proton_antipo_M	PF00361.20	gi|298674256|ref|YP_003726006.1|	-	9.9e-73	244.9	32.9	9.9e-73	244.9	32.9	2.1	2	0	0	2	2	2	1	Proton-conducting	membrane	transporter
GET2	PF08690.10	gi|298674256|ref|YP_003726006.1|	-	0.013	15.2	1.9	0.024	14.3	1.9	1.5	1	0	0	1	1	1	0	GET	complex	subunit	GET2
Proton_antipo_N	PF00662.20	gi|298674256|ref|YP_003726006.1|	-	0.013	15.6	0.3	0.013	15.6	0.3	4.6	7	0	0	7	7	7	0	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
FpoO	PF10621.9	gi|298674257|ref|YP_003726007.1|	-	2.1e-51	172.9	6.6	2.4e-51	172.7	6.6	1.0	1	0	0	1	1	1	1	F420H2	dehydrogenase	subunit	FpoO
Fer4_10	PF13237.6	gi|298674257|ref|YP_003726007.1|	-	0.061	13.4	10.0	0.15	12.2	1.2	3.0	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
DUF4428	PF14471.6	gi|298674257|ref|YP_003726007.1|	-	0.11	12.5	9.8	0.093	12.7	1.0	3.5	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4428)
zf-C4_ClpX	PF06689.13	gi|298674257|ref|YP_003726007.1|	-	0.47	10.4	11.1	7.6	6.5	3.4	3.8	3	1	0	3	3	3	0	ClpX	C4-type	zinc	finger
zf-AD	PF07776.15	gi|298674257|ref|YP_003726007.1|	-	2.7	8.3	9.8	12	6.3	0.5	2.7	1	1	1	2	2	2	0	Zinc-finger	associated	domain	(zf-AD)
Gate	PF07670.14	gi|298674258|ref|YP_003726008.1|	-	9.1e-07	29.1	19.7	0.00052	20.3	4.7	3.0	2	1	1	3	3	3	2	Nucleoside	recognition
FBPase_3	PF01950.16	gi|298674259|ref|YP_003726009.1|	-	2.4e-179	596.1	0.0	2.7e-179	596.0	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
Trm112p	PF03966.16	gi|298674260|ref|YP_003726010.1|	-	8.7e-12	45.4	1.3	1.9e-11	44.3	1.3	1.5	1	1	0	1	1	1	1	Trm112p-like	protein
TF_Zn_Ribbon	PF08271.12	gi|298674260|ref|YP_003726010.1|	-	0.0043	16.5	0.7	0.0064	16.0	0.7	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Cys_rich_KTR	PF14205.6	gi|298674260|ref|YP_003726010.1|	-	0.0046	16.7	0.0	0.0067	16.2	0.0	1.3	1	0	0	1	1	1	1	Cysteine-rich	KTR
zf-RRPl_C4	PF17026.5	gi|298674260|ref|YP_003726010.1|	-	0.012	15.8	0.6	0.022	14.9	0.6	1.6	1	1	0	1	1	1	0	Putative	ribonucleoprotein	zinc-finger	pf	C4	type
CK_II_beta	PF01214.18	gi|298674260|ref|YP_003726010.1|	-	0.016	15.0	0.2	0.016	15.0	0.2	1.0	1	0	0	1	1	1	0	Casein	kinase	II	regulatory	subunit
Lar_restr_allev	PF14354.6	gi|298674260|ref|YP_003726010.1|	-	0.02	15.3	0.2	0.024	15.0	0.2	1.1	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Elf1	PF05129.13	gi|298674260|ref|YP_003726010.1|	-	0.021	14.9	0.0	0.023	14.8	0.0	1.1	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
FdhE	PF04216.12	gi|298674260|ref|YP_003726010.1|	-	0.052	13.4	0.0	0.053	13.4	0.0	1.0	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
HscB_4_cys	PF18256.1	gi|298674260|ref|YP_003726010.1|	-	0.075	12.9	0.0	1.3	8.9	0.0	2.1	2	0	0	2	2	2	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
zf-TFIIB	PF13453.6	gi|298674260|ref|YP_003726010.1|	-	0.085	12.2	1.7	0.21	11.0	1.7	1.6	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
Prim_Zn_Ribbon	PF08273.12	gi|298674260|ref|YP_003726010.1|	-	0.21	11.9	2.0	1.6	9.0	2.0	1.9	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
HKR_ArcB_TM	PF18415.1	gi|298674261|ref|YP_003726011.1|	-	6.6	7.6	7.4	2.1	9.2	0.4	2.3	1	1	1	2	2	2	0	Histidine	kinase	receptor	ArcB	trans-membrane	domain
CTP_synth_N	PF06418.14	gi|298674262|ref|YP_003726012.1|	-	2.5e-124	413.9	0.2	3.3e-124	413.5	0.2	1.1	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.28	gi|298674262|ref|YP_003726012.1|	-	5.8e-55	186.0	0.0	1e-54	185.2	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
CbiA	PF01656.23	gi|298674262|ref|YP_003726012.1|	-	2.7e-05	24.2	0.0	6.2e-05	23.1	0.0	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Peptidase_C26	PF07722.13	gi|298674262|ref|YP_003726012.1|	-	0.00027	20.8	0.1	0.0014	18.4	0.1	2.3	2	1	0	2	2	2	1	Peptidase	C26
MeaB	PF03308.16	gi|298674262|ref|YP_003726012.1|	-	0.029	13.4	0.4	0.15	11.1	0.2	1.9	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
TruD	PF01142.18	gi|298674263|ref|YP_003726013.1|	-	3.7e-166	553.1	0.0	4.2e-166	552.9	0.0	1.0	1	0	0	1	1	1	1	tRNA	pseudouridine	synthase	D	(TruD)
PTH2	PF01981.16	gi|298674264|ref|YP_003726014.1|	-	8.1e-40	135.8	0.2	9e-40	135.6	0.2	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
HTH_19	PF12844.7	gi|298674264|ref|YP_003726014.1|	-	0.023	14.7	0.0	0.041	13.9	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Phage_portal	PF04860.12	gi|298674264|ref|YP_003726014.1|	-	0.03	13.5	0.0	0.03	13.5	0.0	1.0	1	0	0	1	1	1	0	Phage	portal	protein
DUF4568	PF15132.6	gi|298674264|ref|YP_003726014.1|	-	0.047	13.1	0.0	0.056	12.8	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4568)
DUF4288	PF14119.6	gi|298674264|ref|YP_003726014.1|	-	0.13	12.6	0.1	0.19	12.1	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4288)
RimK	PF08443.11	gi|298674265|ref|YP_003726015.1|	-	7.5e-31	107.2	0.0	1.1e-30	106.6	0.0	1.3	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
GSH-S_ATP	PF02955.16	gi|298674265|ref|YP_003726015.1|	-	1.9e-16	60.0	0.1	3.1e-16	59.3	0.1	1.3	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
Rimk_N	PF18030.1	gi|298674265|ref|YP_003726015.1|	-	6.5e-11	42.5	0.0	1.2e-10	41.6	0.0	1.4	1	0	0	1	1	1	1	RimK	PreATP-grasp	domain
ATPgrasp_YheCD	PF14398.6	gi|298674265|ref|YP_003726015.1|	-	1.3e-09	37.7	0.0	2e-08	33.8	0.0	2.3	1	1	0	1	1	1	1	YheC/D	like	ATP-grasp
ATPgrasp_ST	PF14397.6	gi|298674265|ref|YP_003726015.1|	-	7.5e-05	22.1	0.2	0.0099	15.2	0.0	2.7	1	1	1	2	2	2	2	Sugar-transfer	associated	ATP-grasp
ATP-grasp_3	PF02655.14	gi|298674265|ref|YP_003726015.1|	-	0.00023	21.3	0.1	0.0014	18.7	0.1	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
Asparaginase_C	PF17763.1	gi|298674265|ref|YP_003726015.1|	-	0.028	14.7	0.0	0.06	13.6	0.0	1.5	1	0	0	1	1	1	0	Glutaminase/Asparaginase	C-terminal	domain
DUF3566	PF12089.8	gi|298674266|ref|YP_003726016.1|	-	0.00048	20.5	4.5	0.00048	20.5	4.5	2.1	1	1	1	2	2	2	1	Transmembrane	domain	of	unknown	function	(DUF3566)
DUF1700	PF08006.11	gi|298674266|ref|YP_003726016.1|	-	0.094	12.2	12.2	0.1	12.2	12.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
Yip1	PF04893.17	gi|298674266|ref|YP_003726016.1|	-	0.7	9.6	15.0	1	9.1	15.0	1.2	1	0	0	1	1	1	0	Yip1	domain
HRG	PF16954.5	gi|298674266|ref|YP_003726016.1|	-	1.3	9.5	18.8	0.36	11.3	4.3	2.5	1	1	2	3	3	3	0	Haem-transporter,	endosomal/lysosomal,	haem-responsive	gene
DUF4514	PF14986.6	gi|298674266|ref|YP_003726016.1|	-	4	7.5	12.1	0.61	10.1	2.6	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4514)
MtrG	PF04210.13	gi|298674266|ref|YP_003726016.1|	-	5.9	6.8	16.3	1.9	8.4	4.2	2.4	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
DUF4229	PF14012.6	gi|298674266|ref|YP_003726016.1|	-	7	6.8	7.7	8.2	6.6	0.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4229)
DUF2953	PF11167.8	gi|298674266|ref|YP_003726016.1|	-	8.5	6.5	13.6	0.65	10.1	2.4	2.7	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2953)
DUF5616	PF18481.1	gi|298674268|ref|YP_003726018.1|	-	1.1e-46	158.6	1.9	1.7e-46	158.0	1.9	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5616)
DUF434	PF04256.12	gi|298674268|ref|YP_003726018.1|	-	9.3e-23	79.7	0.1	1.9e-22	78.7	0.1	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF434)
OCD_Mu_crystall	PF02423.15	gi|298674269|ref|YP_003726019.1|	-	1.6e-105	352.6	0.1	1.8e-105	352.4	0.1	1.0	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
F420_oxidored	PF03807.17	gi|298674269|ref|YP_003726019.1|	-	0.0025	18.4	0.0	0.007	16.9	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Semialdhyde_dh	PF01118.24	gi|298674269|ref|YP_003726019.1|	-	0.022	15.2	0.0	0.061	13.8	0.0	1.7	1	1	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
zf-tcix	PF14952.6	gi|298674270|ref|YP_003726020.1|	-	0.00039	20.0	1.7	0.00058	19.4	1.7	1.3	1	0	0	1	1	1	1	Putative	treble-clef,	zinc-finger,	Zn-binding
MCM_OB	PF17207.3	gi|298674270|ref|YP_003726020.1|	-	0.006	16.4	0.9	0.0061	16.4	0.9	1.1	1	0	0	1	1	1	1	MCM	OB	domain
zf-ribbon_3	PF13248.6	gi|298674270|ref|YP_003726020.1|	-	0.01	15.2	1.0	0.017	14.5	1.0	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
Rhodanese_C	PF12368.8	gi|298674270|ref|YP_003726020.1|	-	0.017	15.4	0.4	0.019	15.4	0.4	1.1	1	0	0	1	1	1	0	Rhodanase	C-terminal
DUF35_N	PF12172.8	gi|298674270|ref|YP_003726020.1|	-	0.024	14.5	0.8	0.047	13.6	0.8	1.5	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OrfB_Zn_ribbon	PF07282.11	gi|298674270|ref|YP_003726020.1|	-	0.067	13.1	1.8	0.08	12.9	1.8	1.1	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
PBP	PF01161.20	gi|298674271|ref|YP_003726021.1|	-	3.5e-34	117.9	0.0	4.6e-34	117.6	0.0	1.1	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
MS_channel	PF00924.18	gi|298674272|ref|YP_003726022.1|	-	2.7e-52	177.3	9.3	2.7e-52	177.3	9.3	1.6	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Phage_holin_6_1	PF09682.10	gi|298674272|ref|YP_003726022.1|	-	6.1	7.3	7.3	2.8	8.4	0.8	3.3	3	1	1	4	4	4	0	Bacteriophage	holin	of	superfamily	6	(Holin_LLH)
DUF432	PF04254.13	gi|298674273|ref|YP_003726023.1|	-	3.4e-45	153.2	0.5	5.7e-45	152.5	0.5	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF432)
Usp	PF00582.26	gi|298674274|ref|YP_003726024.1|	-	2.9e-37	128.3	0.0	3.2e-37	128.2	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
DXP_reductoisom	PF02670.16	gi|298674274|ref|YP_003726024.1|	-	0.035	14.8	0.0	0.052	14.3	0.0	1.4	1	0	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
DNA_photolyase	PF00875.18	gi|298674274|ref|YP_003726024.1|	-	0.14	12.1	0.0	0.32	11.0	0.0	1.6	1	1	0	1	1	1	0	DNA	photolyase
Usp	PF00582.26	gi|298674275|ref|YP_003726025.1|	-	2.1e-36	125.5	0.0	2.4e-36	125.4	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
DXP_reductoisom	PF02670.16	gi|298674275|ref|YP_003726025.1|	-	0.0016	19.1	0.7	0.0021	18.8	0.6	1.3	1	1	0	1	1	1	1	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
TP_methylase	PF00590.20	gi|298674276|ref|YP_003726026.1|	-	2e-55	188.0	0.0	2.3e-55	187.8	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
HEM4	PF02602.15	gi|298674277|ref|YP_003726027.1|	-	6.7e-38	130.3	0.0	8.4e-38	130.0	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
Radical_SAM	PF04055.21	gi|298674278|ref|YP_003726028.1|	-	4.7e-24	85.6	0.0	2.5e-23	83.3	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|298674278|ref|YP_003726028.1|	-	8.4e-14	52.0	0.0	1.7e-13	51.0	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|298674278|ref|YP_003726028.1|	-	1.6e-09	37.9	0.0	4.8e-09	36.4	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.6	gi|298674278|ref|YP_003726028.1|	-	1.7e-05	25.2	0.1	5.3e-05	23.7	0.1	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
GHL6	PF14871.6	gi|298674278|ref|YP_003726028.1|	-	0.0064	16.6	0.0	6.8	6.8	0.0	2.8	3	0	0	3	3	3	2	Hypothetical	glycosyl	hydrolase	6
Desulfoferrodox	PF01880.18	gi|298674279|ref|YP_003726029.1|	-	6.3e-24	84.4	0.4	7.8e-24	84.1	0.4	1.1	1	0	0	1	1	1	1	Desulfoferrodoxin
Ferritin	PF00210.24	gi|298674280|ref|YP_003726030.1|	-	9.3e-44	148.8	4.6	1.1e-43	148.5	4.6	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
ANAPC5	PF12862.7	gi|298674280|ref|YP_003726030.1|	-	0.0007	19.6	0.2	0.0015	18.6	0.2	1.5	1	0	0	1	1	1	1	Anaphase-promoting	complex	subunit	5
TnpB_IS66	PF05717.13	gi|298674280|ref|YP_003726030.1|	-	0.051	13.5	0.1	0.65	9.9	0.0	2.3	2	1	0	2	2	2	0	IS66	Orf2	like	protein
tRNA-synt_1	PF00133.22	gi|298674281|ref|YP_003726031.1|	-	2.1e-131	439.2	3.5	3.2e-130	435.2	3.5	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|298674281|ref|YP_003726031.1|	-	3.8e-39	134.1	0.4	7.5e-39	133.1	0.4	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|298674281|ref|YP_003726031.1|	-	1.4e-22	80.0	0.5	8.2e-13	47.8	0.0	3.5	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.6	gi|298674281|ref|YP_003726031.1|	-	4.3e-07	29.6	0.0	1.8e-06	27.6	0.0	1.9	1	1	1	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.19	gi|298674281|ref|YP_003726031.1|	-	5.1e-05	22.8	0.0	0.31	10.3	0.0	2.6	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1b	PF00579.25	gi|298674281|ref|YP_003726031.1|	-	0.031	13.6	0.1	0.78	9.0	0.0	2.8	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(W	and	Y)
PMBR	PF09373.10	gi|298674281|ref|YP_003726031.1|	-	1.5	9.1	3.3	6.9	7.0	0.0	3.4	4	0	0	4	4	4	0	Pseudomurein-binding	repeat
tRNA-synt_2d	PF01409.20	gi|298674282|ref|YP_003726032.1|	-	5.6e-13	48.9	0.0	1.1e-11	44.7	0.0	2.3	1	1	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.20	gi|298674282|ref|YP_003726032.1|	-	2.2e-08	33.6	2.7	8.1e-08	31.7	0.0	3.0	3	1	1	4	4	4	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_synthFbeta	PF17759.1	gi|298674282|ref|YP_003726032.1|	-	4.1e-06	26.4	0.0	8.5e-06	25.3	0.0	1.5	1	0	0	1	1	1	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
tRNA-synt_2b	PF00587.25	gi|298674282|ref|YP_003726032.1|	-	0.00065	19.7	0.1	0.0049	16.9	0.0	2.5	1	1	1	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Zn_ribbon_recom	PF13408.6	gi|298674282|ref|YP_003726032.1|	-	1	9.9	3.9	0.6	10.7	1.0	2.1	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
URO-D	PF01208.17	gi|298674283|ref|YP_003726033.1|	-	2.9e-81	273.3	0.0	3.2e-81	273.2	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
2-Hacid_dh_C	PF02826.19	gi|298674284|ref|YP_003726034.1|	-	3.2e-63	212.3	0.1	1.7e-62	209.9	0.0	2.3	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|298674284|ref|YP_003726034.1|	-	3e-42	143.4	1.6	6.7e-42	142.3	0.8	2.0	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
ACT	PF01842.25	gi|298674284|ref|YP_003726034.1|	-	4.8e-05	23.0	0.3	0.00037	20.2	0.0	2.6	2	0	0	2	2	2	1	ACT	domain
NAD_binding_2	PF03446.15	gi|298674284|ref|YP_003726034.1|	-	0.00015	21.9	2.1	0.001	19.3	0.1	2.9	3	1	0	3	3	3	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.12	gi|298674284|ref|YP_003726034.1|	-	0.00017	21.2	0.2	0.0054	16.3	0.0	2.4	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
F420_oxidored	PF03807.17	gi|298674284|ref|YP_003726034.1|	-	0.0015	19.1	0.5	0.15	12.7	0.0	3.5	3	1	1	4	4	4	1	NADP	oxidoreductase	coenzyme	F420-dependent
UDPG_MGDP_dh_C	PF03720.15	gi|298674284|ref|YP_003726034.1|	-	0.017	15.5	0.1	0.15	12.5	0.0	2.4	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
DUF2240	PF09999.9	gi|298674286|ref|YP_003726036.1|	-	9.7e-42	142.0	0.4	1.1e-41	141.8	0.4	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2240)
Ribosomal_L18	PF17135.4	gi|298674287|ref|YP_003726037.1|	-	2e-11	43.6	0.0	2.4e-11	43.4	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	60S	L18	and	50S	L18e
Ribosomal_L27A	PF00828.19	gi|298674287|ref|YP_003726037.1|	-	1.1e-07	32.5	1.6	3.5e-07	31.0	1.6	1.8	1	1	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
AAA_26	PF13500.6	gi|298674287|ref|YP_003726037.1|	-	0.069	13.0	0.0	0.087	12.6	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
Ribosomal_L13	PF00572.18	gi|298674288|ref|YP_003726038.1|	-	1.4e-10	41.5	0.6	1.9e-08	34.6	0.6	2.1	1	1	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_S9	PF00380.19	gi|298674289|ref|YP_003726039.1|	-	8.1e-32	110.3	0.9	9.1e-32	110.1	0.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
RNA_pol_N	PF01194.17	gi|298674290|ref|YP_003726040.1|	-	1.8e-31	108.2	0.3	1.9e-31	108.1	0.3	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.12	gi|298674290|ref|YP_003726040.1|	-	0.024	14.9	0.1	0.032	14.5	0.1	1.2	1	0	0	1	1	1	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
RNA_pol_Rpb6	PF01192.22	gi|298674291|ref|YP_003726041.1|	-	3e-14	52.6	0.1	3.9e-14	52.3	0.1	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
DUF190	PF02641.15	gi|298674291|ref|YP_003726041.1|	-	0.065	13.6	0.1	0.072	13.4	0.1	1.1	1	0	0	1	1	1	0	Uncharacterized	ACR,	COG1993
Ribosomal_S2	PF00318.20	gi|298674292|ref|YP_003726042.1|	-	2.1e-23	82.7	0.3	1.9e-12	46.9	0.1	2.3	1	1	1	2	2	2	2	Ribosomal	protein	S2
DUF3131	PF11329.8	gi|298674292|ref|YP_003726042.1|	-	0.14	11.2	0.2	0.2	10.7	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3131)
Memo	PF01875.17	gi|298674293|ref|YP_003726043.1|	-	1e-78	264.2	0.0	1.2e-78	264.0	0.0	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.18	gi|298674293|ref|YP_003726043.1|	-	0.0051	15.9	0.0	0.0058	15.7	0.0	1.3	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
GHMP_kinases_N	PF00288.26	gi|298674294|ref|YP_003726044.1|	-	8.4e-17	61.2	0.2	1.7e-16	60.2	0.2	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|298674294|ref|YP_003726044.1|	-	9.5e-15	54.7	2.2	6.8e-14	52.0	0.3	2.5	2	1	0	2	2	2	1	GHMP	kinases	C	terminal
GalKase_gal_bdg	PF10509.9	gi|298674294|ref|YP_003726044.1|	-	0.0022	17.5	0.1	0.0046	16.5	0.1	1.5	1	0	0	1	1	1	1	Galactokinase	galactose-binding	signature
AA_kinase	PF00696.28	gi|298674295|ref|YP_003726045.1|	-	9.3e-35	120.4	1.5	1.1e-34	120.2	1.5	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
pXO2-34	PF17362.2	gi|298674295|ref|YP_003726045.1|	-	0.061	13.2	0.1	0.57	10.1	0.0	2.2	2	0	0	2	2	2	0	Family	of	unknown	function
FMN_dh	PF01070.18	gi|298674296|ref|YP_003726046.1|	-	1.4e-27	96.6	0.1	7.2e-26	91.0	0.1	2.1	1	1	0	1	1	1	1	FMN-dependent	dehydrogenase
IMPDH	PF00478.25	gi|298674296|ref|YP_003726046.1|	-	1.8e-05	23.9	6.7	0.057	12.4	0.2	3.4	3	1	0	3	3	3	3	IMP	dehydrogenase	/	GMP	reductase	domain
DHO_dh	PF01180.21	gi|298674296|ref|YP_003726046.1|	-	0.0014	17.9	3.0	0.089	12.0	0.0	3.4	3	1	0	3	3	3	1	Dihydroorotate	dehydrogenase
Glu_synthase	PF01645.17	gi|298674296|ref|YP_003726046.1|	-	0.0081	15.3	0.0	0.018	14.2	0.0	1.6	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
NMO	PF03060.15	gi|298674296|ref|YP_003726046.1|	-	0.055	12.8	2.9	0.16	11.3	2.6	2.0	1	1	0	1	1	1	0	Nitronate	monooxygenase
Lactamase_B_2	PF12706.7	gi|298674297|ref|YP_003726047.1|	-	1.7e-08	34.3	1.0	2.9e-08	33.5	0.1	1.8	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.12	gi|298674297|ref|YP_003726047.1|	-	4.3e-08	33.0	1.0	2.1e-07	30.8	0.1	2.5	3	0	0	3	3	3	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B	PF00753.27	gi|298674297|ref|YP_003726047.1|	-	1.3e-07	31.9	1.2	5.7e-07	29.7	1.3	1.8	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Nkap_C	PF06047.11	gi|298674297|ref|YP_003726047.1|	-	0.16	12.1	0.0	0.39	10.9	0.0	1.6	1	0	0	1	1	1	0	NF-kappa-B-activating	protein	C-terminal	domain
PEP-utilizers_C	PF02896.18	gi|298674298|ref|YP_003726048.1|	-	1.3e-90	303.5	0.0	2.6e-90	302.5	0.0	1.5	2	0	0	2	2	2	1	PEP-utilising	enzyme,	TIM	barrel	domain
PPDK_N	PF01326.19	gi|298674298|ref|YP_003726048.1|	-	4e-64	217.0	0.9	5.6e-47	160.6	0.0	3.2	1	1	1	2	2	2	2	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers	PF00391.23	gi|298674298|ref|YP_003726048.1|	-	2.6e-28	97.5	0.7	7e-28	96.2	0.7	1.8	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
FPP	PF05911.11	gi|298674298|ref|YP_003726048.1|	-	0.0039	15.5	2.1	0.0059	14.9	2.1	1.1	1	0	0	1	1	1	1	Filament-like	plant	protein,	long	coiled-coil
WXG100	PF06013.12	gi|298674298|ref|YP_003726048.1|	-	0.07	13.4	1.0	16	5.8	0.1	3.0	2	0	0	2	2	2	0	Proteins	of	100	residues	with	WXG
PEP-utilisers_N	PF05524.13	gi|298674298|ref|YP_003726048.1|	-	0.81	9.9	3.1	2.4	8.4	0.1	2.9	2	1	0	2	2	2	0	PEP-utilising	enzyme,	N-terminal
Seryl_tRNA_N	PF02403.22	gi|298674298|ref|YP_003726048.1|	-	5.1	7.4	8.2	7.3	6.9	0.1	3.9	3	0	0	3	3	3	0	Seryl-tRNA	synthetase	N-terminal	domain
Syntaxin_2	PF14523.6	gi|298674298|ref|YP_003726048.1|	-	5.7	7.4	5.7	32	5.0	0.1	3.5	3	0	0	3	3	3	0	Syntaxin-like	protein
Gar1	PF04410.14	gi|298674299|ref|YP_003726049.1|	-	8.2e-09	35.4	0.1	8.9e-09	35.3	0.1	1.1	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
TFIIB	PF00382.19	gi|298674300|ref|YP_003726050.1|	-	2.3e-44	149.3	1.4	2.2e-21	75.7	0.3	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.12	gi|298674300|ref|YP_003726050.1|	-	2.1e-17	62.4	1.5	2.1e-17	62.4	1.5	1.9	2	0	0	2	2	2	1	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.11	gi|298674300|ref|YP_003726050.1|	-	9.7e-06	25.4	1.3	2.4e-05	24.2	1.3	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Sigma70_r4	PF04545.16	gi|298674300|ref|YP_003726050.1|	-	6.8e-05	22.3	0.8	0.026	14.0	0.2	3.0	2	0	0	2	2	2	1	Sigma-70,	region	4
zf-ACC	PF17848.1	gi|298674300|ref|YP_003726050.1|	-	0.00021	21.3	3.9	0.0053	16.8	2.3	2.7	2	0	0	2	2	2	1	Acetyl-coA	carboxylase	zinc	finger	domain
HTH_AsnC-type	PF13404.6	gi|298674300|ref|YP_003726050.1|	-	0.015	15.1	0.8	0.051	13.4	0.2	2.3	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
Elf1	PF05129.13	gi|298674300|ref|YP_003726050.1|	-	0.039	14.0	0.8	0.039	14.0	0.8	1.9	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
RPA_interact_C	PF14768.6	gi|298674300|ref|YP_003726050.1|	-	0.044	14.3	0.1	3.4	8.3	0.0	2.5	2	0	0	2	2	2	0	Replication	protein	A	interacting	C-terminal
Cyclin_C	PF02984.19	gi|298674300|ref|YP_003726050.1|	-	0.079	13.0	0.0	14	5.8	0.0	2.4	2	0	0	2	2	2	0	Cyclin,	C-terminal	domain
zf-RING_7	PF02591.15	gi|298674300|ref|YP_003726050.1|	-	0.087	13.0	0.2	1.4	9.2	0.0	2.7	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
zf-tcix	PF14952.6	gi|298674300|ref|YP_003726050.1|	-	0.092	12.4	0.4	0.36	10.5	0.0	2.1	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Zn-ribbon_8	PF09723.10	gi|298674300|ref|YP_003726050.1|	-	0.093	12.9	0.7	0.093	12.9	0.7	3.1	2	1	1	3	3	3	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|298674300|ref|YP_003726050.1|	-	0.13	11.8	3.3	1.3	8.5	3.3	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
HypA	PF01155.19	gi|298674300|ref|YP_003726050.1|	-	0.13	12.3	1.5	1.3	9.0	1.1	2.4	2	0	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
A2L_zn_ribbon	PF08792.10	gi|298674300|ref|YP_003726050.1|	-	0.24	11.1	2.3	11	5.8	2.5	2.5	1	1	1	2	2	2	0	A2L	zinc	ribbon	domain
HTH_31	PF13560.6	gi|298674300|ref|YP_003726050.1|	-	0.25	11.7	4.1	7.8	6.9	0.1	3.3	3	0	0	3	3	3	0	Helix-turn-helix	domain
Auto_anti-p27	PF06677.12	gi|298674300|ref|YP_003726050.1|	-	0.25	11.5	2.3	2.5	8.3	1.0	2.3	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
IBR	PF01485.21	gi|298674300|ref|YP_003726050.1|	-	0.4	11.0	4.6	0.17	12.1	1.9	1.7	2	0	0	2	2	1	0	IBR	domain,	a	half	RING-finger	domain
Nudix_N_2	PF14803.6	gi|298674300|ref|YP_003726050.1|	-	1.9	8.5	4.1	2.1	8.4	0.5	2.9	2	1	0	2	2	2	0	Nudix	N-terminal
LysE	PF01810.18	gi|298674301|ref|YP_003726051.1|	-	5.4e-33	114.1	14.4	6.7e-33	113.8	14.4	1.1	1	0	0	1	1	1	1	LysE	type	translocator
MaoC_dehydratas	PF01575.19	gi|298674301|ref|YP_003726051.1|	-	0.11	12.0	0.0	1.6	8.3	0.1	2.1	2	0	0	2	2	2	0	MaoC	like	domain
DUF3185	PF11381.8	gi|298674301|ref|YP_003726051.1|	-	0.13	12.3	0.1	0.13	12.3	0.1	3.4	4	1	0	4	4	4	0	Protein	of	unknown	function	(DUF3185)
CRPA	PF05745.11	gi|298674301|ref|YP_003726051.1|	-	0.87	9.6	5.9	4.4	7.3	1.1	2.2	2	0	0	2	2	2	0	Chlamydia	15	kDa	cysteine-rich	outer	membrane	protein	(CRPA)
TMEM43	PF07787.12	gi|298674301|ref|YP_003726051.1|	-	3.5	6.9	7.4	1.4	8.2	0.9	2.2	2	0	0	2	2	2	0	Transmembrane	protein	43
Met_10	PF02475.16	gi|298674302|ref|YP_003726052.1|	-	4.8e-62	209.3	1.0	6.2e-62	208.9	1.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Trm5_N	PF18093.1	gi|298674302|ref|YP_003726052.1|	-	7.3e-17	61.0	0.0	1.7e-16	59.8	0.0	1.6	1	0	0	1	1	1	1	tRNA	methyltransferase	5	N-terminal	domain
MTS	PF05175.14	gi|298674302|ref|YP_003726052.1|	-	4.2e-08	32.9	0.1	9.8e-08	31.7	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|298674302|ref|YP_003726052.1|	-	1.6e-07	31.0	0.4	3.4e-07	30.0	0.4	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.6	gi|298674302|ref|YP_003726052.1|	-	2.6e-07	31.2	0.0	7.7e-07	29.7	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298674302|ref|YP_003726052.1|	-	6.2e-07	29.3	0.0	9e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
TRM	PF02005.16	gi|298674302|ref|YP_003726052.1|	-	3.4e-06	26.5	0.1	4.4e-06	26.1	0.1	1.2	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Methyltransf_15	PF09445.10	gi|298674302|ref|YP_003726052.1|	-	3.4e-05	23.5	0.0	6.5e-05	22.6	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Cons_hypoth95	PF03602.15	gi|298674302|ref|YP_003726052.1|	-	9.1e-05	22.2	0.1	0.00023	20.8	0.0	1.8	1	1	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltr_RsmB-F	PF01189.17	gi|298674302|ref|YP_003726052.1|	-	0.0001	22.0	0.0	0.0029	17.3	0.0	2.7	2	1	1	3	3	3	1	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_11	PF08241.12	gi|298674302|ref|YP_003726052.1|	-	0.0017	19.0	0.0	0.0042	17.7	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
tRNA_U5-meth_tr	PF05958.11	gi|298674302|ref|YP_003726052.1|	-	0.01	14.9	0.0	0.015	14.3	0.0	1.2	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_4	PF02390.17	gi|298674302|ref|YP_003726052.1|	-	0.013	14.9	0.1	0.068	12.6	0.1	2.2	3	0	0	3	3	3	0	Putative	methyltransferase
Methyltransf_18	PF12847.7	gi|298674302|ref|YP_003726052.1|	-	0.022	14.7	0.0	0.041	13.8	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
GidB	PF02527.15	gi|298674302|ref|YP_003726052.1|	-	0.027	13.8	0.0	0.044	13.1	0.0	1.3	1	0	0	1	1	1	0	rRNA	small	subunit	methyltransferase	G
Methyltransf_12	PF08242.12	gi|298674302|ref|YP_003726052.1|	-	0.033	14.9	0.0	0.071	13.9	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
PRMT5	PF05185.16	gi|298674302|ref|YP_003726052.1|	-	0.11	12.3	0.0	0.19	11.6	0.0	1.4	1	0	0	1	1	1	0	PRMT5	arginine-N-methyltransferase
D5_N	PF08706.11	gi|298674303|ref|YP_003726053.1|	-	8.7e-13	48.8	0.3	1.7e-12	47.8	0.3	1.6	1	0	0	1	1	1	1	D5	N	terminal	like
Pox_D5	PF03288.16	gi|298674303|ref|YP_003726053.1|	-	0.00022	21.7	0.4	0.00055	20.4	0.4	1.7	1	0	0	1	1	1	1	Poxvirus	D5	protein-like
Transglut_core	PF01841.19	gi|298674304|ref|YP_003726054.1|	-	0.0034	17.8	0.0	0.014	15.8	0.0	2.0	1	1	0	1	1	1	1	Transglutaminase-like	superfamily
DUF4198	PF10670.9	gi|298674304|ref|YP_003726054.1|	-	0.062	13.7	0.0	0.11	12.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4198)
CarboxypepD_reg	PF13620.6	gi|298674304|ref|YP_003726054.1|	-	0.17	12.2	0.0	0.29	11.4	0.0	1.4	1	0	0	1	1	1	0	Carboxypeptidase	regulatory-like	domain
Phage_integrase	PF00589.22	gi|298674305|ref|YP_003726055.1|	-	1.2e-29	103.3	0.6	1.4e-29	103.1	0.6	1.0	1	0	0	1	1	1	1	Phage	integrase	family
PSI_PsaF	PF02507.15	gi|298674305|ref|YP_003726055.1|	-	0.11	12.3	0.0	0.14	12.0	0.0	1.2	1	0	0	1	1	1	0	Photosystem	I	reaction	centre	subunit	III
EVE	PF01878.18	gi|298674306|ref|YP_003726056.1|	-	2.7e-08	33.9	0.9	1.5e-07	31.5	0.9	1.9	1	1	0	1	1	1	1	EVE	domain
HNH	PF01844.23	gi|298674307|ref|YP_003726057.1|	-	1.5e-11	44.3	4.2	1.6e-11	44.2	2.5	2.0	2	0	0	2	2	2	1	HNH	endonuclease
HNH_5	PF14279.6	gi|298674307|ref|YP_003726057.1|	-	0.00015	21.6	0.4	0.00048	19.9	0.4	1.9	1	1	0	1	1	1	1	HNH	endonuclease
DUF4385	PF14328.6	gi|298674307|ref|YP_003726057.1|	-	0.015	15.3	0.0	0.15	12.1	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4385)
HNH_2	PF13391.6	gi|298674307|ref|YP_003726057.1|	-	0.029	14.5	0.9	0.46	10.6	0.3	3.0	2	1	0	2	2	2	0	HNH	endonuclease
RE_AlwI	PF09491.10	gi|298674309|ref|YP_003726059.1|	-	2.8e-57	194.5	23.0	2.8e-57	194.5	23.0	1.7	2	0	0	2	2	2	1	AlwI	restriction	endonuclease
Methyltr_RsmF_N	PF17125.5	gi|298674309|ref|YP_003726059.1|	-	0.033	14.7	0.5	12	6.4	0.0	3.2	3	0	0	3	3	3	0	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
N6_N4_Mtase	PF01555.18	gi|298674310|ref|YP_003726060.1|	-	6.6e-24	84.9	3.5	1.6e-21	77.1	3.5	2.1	1	1	0	1	1	1	1	DNA	methylase
UPF0020	PF01170.18	gi|298674310|ref|YP_003726060.1|	-	0.00013	21.7	0.3	0.46	10.1	0.0	3.1	3	1	0	3	3	3	2	Putative	RNA	methylase	family	UPF0020
MethyltransfD12	PF02086.15	gi|298674310|ref|YP_003726060.1|	-	0.00033	20.4	3.0	0.0049	16.6	0.0	2.5	2	1	0	2	2	2	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_31	PF13847.6	gi|298674310|ref|YP_003726060.1|	-	0.0069	16.2	0.2	0.29	10.9	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298674310|ref|YP_003726060.1|	-	0.013	16.2	0.0	3.6	8.4	0.0	3.0	3	0	0	3	3	3	0	Methyltransferase	domain
N6_Mtase	PF02384.16	gi|298674310|ref|YP_003726060.1|	-	0.014	14.7	0.2	0.21	10.8	0.1	2.0	2	0	0	2	2	2	0	N-6	DNA	Methylase
Methyltransf_11	PF08241.12	gi|298674310|ref|YP_003726060.1|	-	0.029	15.0	0.0	56	4.5	0.0	3.1	3	0	0	3	3	3	0	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|298674310|ref|YP_003726060.1|	-	0.049	14.4	0.1	9.5	7.0	0.0	3.0	2	1	0	3	3	3	0	Methyltransferase	domain
UPRTase	PF14681.6	gi|298674310|ref|YP_003726060.1|	-	0.13	11.6	0.0	0.23	10.9	0.0	1.3	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
DUF2254	PF10011.9	gi|298674311|ref|YP_003726061.1|	-	2.3e-09	36.5	3.7	3.9e-09	35.8	3.7	1.3	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2254)
Phage_integrase	PF00589.22	gi|298674312|ref|YP_003726062.1|	-	2.1e-25	89.5	0.1	4.4e-25	88.4	0.1	1.6	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.17	gi|298674312|ref|YP_003726062.1|	-	1.8e-06	28.1	0.2	4.9e-06	26.8	0.1	1.8	2	0	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
zf-ribbon_3	PF13248.6	gi|298674312|ref|YP_003726062.1|	-	1.4e-05	24.3	3.9	2.6e-05	23.4	3.9	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|298674312|ref|YP_003726062.1|	-	9.9e-05	21.9	3.6	0.00018	21.1	3.6	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|298674312|ref|YP_003726062.1|	-	0.00014	21.8	1.1	0.00025	21.0	1.1	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Phage_int_SAM_4	PF13495.6	gi|298674312|ref|YP_003726062.1|	-	0.0013	19.2	0.9	0.007	16.8	0.8	2.2	1	1	1	2	2	2	2	Phage	integrase,	N-terminal	SAM-like	domain
zf_C2H2_13	PF18508.1	gi|298674312|ref|YP_003726062.1|	-	0.092	12.3	2.9	0.21	11.2	0.1	2.7	2	1	1	3	3	3	0	Zinc	finger	domain
PEP-utilisers_N	PF05524.13	gi|298674312|ref|YP_003726062.1|	-	0.11	12.7	0.0	0.34	11.1	0.0	1.8	1	0	0	1	1	1	0	PEP-utilising	enzyme,	N-terminal
DUF2116	PF09889.9	gi|298674312|ref|YP_003726062.1|	-	0.16	12.0	1.2	0.54	10.3	1.2	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
zinc_ribbon_15	PF17032.5	gi|298674312|ref|YP_003726062.1|	-	0.24	12.1	1.7	0.48	11.2	1.7	1.4	1	0	0	1	1	1	0	zinc-ribbon	family
Plasmod_dom_1	PF09715.10	gi|298674314|ref|YP_003726064.1|	-	0.028	14.5	1.2	0.12	12.5	1.2	2.1	1	0	0	1	1	1	0	Plasmodium	protein	of	unknown	function	(Plasmod_dom_1)
Diphthamide_syn	PF01866.17	gi|298674315|ref|YP_003726065.1|	-	0.015	14.7	0.1	0.016	14.6	0.1	1.0	1	0	0	1	1	1	0	Putative	diphthamide	synthesis	protein
DUF3654	PF12376.8	gi|298674315|ref|YP_003726065.1|	-	0.039	14.1	0.4	0.042	14.0	0.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3654)
ArsC	PF03960.15	gi|298674315|ref|YP_003726065.1|	-	0.095	12.7	0.1	0.095	12.7	0.1	1.2	1	0	0	1	1	1	0	ArsC	family
HTH_OrfB_IS605	PF12323.8	gi|298674316|ref|YP_003726066.1|	-	8.3e-13	47.6	0.0	1.3e-12	47.0	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
OrfB_IS605	PF01385.19	gi|298674317|ref|YP_003726067.1|	-	3.4e-28	98.3	0.5	6.6e-28	97.4	0.2	1.6	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674317|ref|YP_003726067.1|	-	1.4e-26	92.2	1.1	2.9e-26	91.2	1.1	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zinc_ribbon_2	PF13240.6	gi|298674317|ref|YP_003726067.1|	-	0.0053	16.4	1.0	3.3	7.6	0.0	2.7	2	0	0	2	2	2	2	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674317|ref|YP_003726067.1|	-	0.028	14.4	1.9	0.061	13.3	1.9	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DZR	PF12773.7	gi|298674317|ref|YP_003726067.1|	-	0.064	13.3	0.5	0.15	12.1	0.5	1.6	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF4503	PF14951.6	gi|298674317|ref|YP_003726067.1|	-	0.071	11.6	0.1	0.11	11.0	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4503)
Remorin_C	PF03763.13	gi|298674317|ref|YP_003726067.1|	-	0.074	12.9	4.7	0.15	12.0	4.7	1.4	1	0	0	1	1	1	0	Remorin,	C-terminal	region
TF_Zn_Ribbon	PF08271.12	gi|298674317|ref|YP_003726067.1|	-	0.29	10.7	2.5	1.7	8.3	2.5	2.2	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-ribbon_3	PF13248.6	gi|298674317|ref|YP_003726067.1|	-	0.97	8.9	4.9	7	6.2	0.0	2.7	3	0	0	3	3	3	0	zinc-ribbon	domain
SLX9	PF15341.6	gi|298674317|ref|YP_003726067.1|	-	8.9	6.7	11.2	21	5.5	11.2	1.6	1	1	0	1	1	1	0	Ribosome	biogenesis	protein	SLX9
Glyoxalase	PF00903.25	gi|298674318|ref|YP_003726068.1|	-	2.9e-18	66.3	0.0	3.3e-18	66.1	0.0	1.0	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_4	PF13669.6	gi|298674318|ref|YP_003726068.1|	-	1.6e-11	44.5	0.0	2e-11	44.1	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.7	gi|298674318|ref|YP_003726068.1|	-	0.00098	19.0	0.3	0.015	15.3	0.3	2.1	1	1	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase_3	PF13468.6	gi|298674318|ref|YP_003726068.1|	-	0.0018	18.4	0.0	0.0024	18.0	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase-like	domain
Arabinose_Isome	PF02610.15	gi|298674318|ref|YP_003726068.1|	-	0.06	12.6	0.0	0.071	12.3	0.0	1.0	1	0	0	1	1	1	0	L-arabinose	isomerase
TPR_7	PF13176.6	gi|298674318|ref|YP_003726068.1|	-	0.069	13.2	0.0	12	6.2	0.0	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
FA_hydroxylase	PF04116.13	gi|298674319|ref|YP_003726069.1|	-	0.14	12.5	0.1	0.17	12.3	0.1	1.2	1	0	0	1	1	1	0	Fatty	acid	hydroxylase	superfamily
Syntaxin_2	PF14523.6	gi|298674321|ref|YP_003726071.1|	-	0.027	14.9	0.1	0.87	10.0	0.0	2.1	2	0	0	2	2	2	0	Syntaxin-like	protein
UvrD-helicase	PF00580.21	gi|298674323|ref|YP_003726073.1|	-	6.8e-17	62.0	2.5	3.9e-08	33.2	0.0	3.3	4	0	0	4	4	4	2	UvrD/REP	helicase	N-terminal	domain
AAA_19	PF13245.6	gi|298674323|ref|YP_003726073.1|	-	1.5e-14	54.6	0.0	1.9e-13	51.0	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
UvrD_C_2	PF13538.6	gi|298674323|ref|YP_003726073.1|	-	5e-08	32.6	0.0	1.2e-07	31.5	0.0	1.6	1	0	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
NERD	PF08378.11	gi|298674323|ref|YP_003726073.1|	-	2.4e-07	31.2	0.2	6.2e-07	29.9	0.2	1.7	1	0	0	1	1	1	1	Nuclease-related	domain
Viral_helicase1	PF01443.18	gi|298674323|ref|YP_003726073.1|	-	2.5e-07	30.7	0.1	0.15	11.7	0.0	3.6	3	1	0	3	3	3	3	Viral	(Superfamily	1)	RNA	helicase
ResIII	PF04851.15	gi|298674323|ref|YP_003726073.1|	-	2.8e-06	27.4	0.6	8.3e-05	22.7	0.1	2.5	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_12	PF13087.6	gi|298674323|ref|YP_003726073.1|	-	1.3e-05	25.0	1.0	8.3e-05	22.3	0.1	2.6	2	1	0	2	2	2	1	AAA	domain
UvrD_C	PF13361.6	gi|298674323|ref|YP_003726073.1|	-	3e-05	23.6	0.2	3e-05	23.6	0.2	2.7	2	2	1	3	3	3	1	UvrD-like	helicase	C-terminal	domain
DUF2075	PF09848.9	gi|298674323|ref|YP_003726073.1|	-	4.6e-05	22.8	0.0	0.00016	21.1	0.0	1.9	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
DEAD	PF00270.29	gi|298674323|ref|YP_003726073.1|	-	0.011	15.6	0.0	0.042	13.6	0.0	1.9	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
DAP3	PF10236.9	gi|298674323|ref|YP_003726073.1|	-	0.036	13.2	0.1	0.085	12.0	0.0	1.6	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_22	PF13401.6	gi|298674323|ref|YP_003726073.1|	-	0.05	13.9	0.0	0.38	11.0	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|298674323|ref|YP_003726073.1|	-	0.053	13.2	0.0	0.085	12.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
PhoH	PF02562.16	gi|298674323|ref|YP_003726073.1|	-	0.063	12.7	0.0	0.17	11.3	0.0	1.8	1	0	0	1	1	1	0	PhoH-like	protein
ATPase	PF06745.13	gi|298674323|ref|YP_003726073.1|	-	0.067	12.5	0.0	0.12	11.7	0.0	1.4	1	0	0	1	1	1	0	KaiC
Zn_dep_PLPC	PF00882.18	gi|298674324|ref|YP_003726074.1|	-	0.00013	22.0	0.0	0.0003	20.8	0.0	1.5	1	1	0	1	1	1	1	Zinc	dependent	phospholipase	C
Pribosyltran_N	PF13793.6	gi|298674324|ref|YP_003726074.1|	-	0.019	14.9	0.0	0.039	13.9	0.0	1.5	1	0	0	1	1	1	0	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
UvrD-helicase	PF00580.21	gi|298674325|ref|YP_003726075.1|	-	4.8e-63	213.6	5.9	4.8e-63	213.6	5.9	2.6	2	1	0	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
UvrD_C	PF13361.6	gi|298674325|ref|YP_003726075.1|	-	3.1e-50	171.5	0.0	4.6e-49	167.7	0.0	2.7	2	1	0	2	2	2	1	UvrD-like	helicase	C-terminal	domain
AAA_19	PF13245.6	gi|298674325|ref|YP_003726075.1|	-	4.2e-34	118.0	0.0	1.3e-33	116.4	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
PDDEXK_1	PF12705.7	gi|298674325|ref|YP_003726075.1|	-	5.5e-25	88.7	0.1	1.2e-24	87.7	0.1	1.6	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
UvrD_C_2	PF13538.6	gi|298674325|ref|YP_003726075.1|	-	8e-11	41.6	0.0	0.00026	20.7	0.0	2.6	2	0	0	2	2	2	2	UvrD-like	helicase	C-terminal	domain
DUF2800	PF10926.8	gi|298674325|ref|YP_003726075.1|	-	4.4e-08	32.8	0.0	8.8e-08	31.8	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2800)
AAA_30	PF13604.6	gi|298674325|ref|YP_003726075.1|	-	4.5e-08	33.0	0.0	1.2e-05	25.1	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
Viral_helicase1	PF01443.18	gi|298674325|ref|YP_003726075.1|	-	1.3e-06	28.3	2.8	0.73	9.5	0.2	4.8	5	0	0	5	5	5	2	Viral	(Superfamily	1)	RNA	helicase
AAA_12	PF13087.6	gi|298674325|ref|YP_003726075.1|	-	0.0028	17.3	2.0	1.3	8.6	0.0	3.6	3	1	0	3	3	3	2	AAA	domain
Dna2	PF08696.11	gi|298674325|ref|YP_003726075.1|	-	0.008	16.0	0.3	0.062	13.1	0.0	2.4	2	0	0	2	2	2	1	DNA	replication	factor	Dna2
SNase	PF00565.17	gi|298674326|ref|YP_003726076.1|	-	3.6e-08	33.9	0.4	4.9e-08	33.4	0.4	1.2	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
HTH_5	PF01022.20	gi|298674327|ref|YP_003726077.1|	-	5.3e-07	29.4	0.1	1.1e-06	28.4	0.0	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|298674327|ref|YP_003726077.1|	-	1.6e-06	27.6	0.1	2.5e-06	26.9	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.7	gi|298674327|ref|YP_003726077.1|	-	6.7e-05	22.9	0.0	0.0005	20.1	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|298674327|ref|YP_003726077.1|	-	0.00014	21.6	0.0	0.00023	20.9	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_11	PF08279.12	gi|298674327|ref|YP_003726077.1|	-	0.00027	20.8	0.1	0.00052	19.9	0.1	1.5	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.19	gi|298674327|ref|YP_003726077.1|	-	0.00066	19.5	0.0	0.0017	18.2	0.0	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Cas_APE2256	PF09651.10	gi|298674327|ref|YP_003726077.1|	-	0.0012	18.8	0.0	0.0016	18.3	0.0	1.3	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_APE2256)
Cas_Cas02710	PF09670.10	gi|298674327|ref|YP_003726077.1|	-	0.0014	17.5	0.4	0.0018	17.1	0.4	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
HTH_45	PF14947.6	gi|298674327|ref|YP_003726077.1|	-	0.0021	18.0	0.3	0.0052	16.8	0.3	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix
MarR_2	PF12802.7	gi|298674327|ref|YP_003726077.1|	-	0.0025	17.7	0.0	0.0045	16.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.6	gi|298674327|ref|YP_003726077.1|	-	0.033	14.7	0.0	0.086	13.3	0.0	1.7	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_10	PF04967.12	gi|298674327|ref|YP_003726077.1|	-	0.042	13.7	0.0	0.089	12.6	0.0	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
AAA_14	PF13173.6	gi|298674327|ref|YP_003726077.1|	-	0.045	13.8	0.5	0.068	13.2	0.3	1.4	1	1	0	1	1	1	0	AAA	domain
Rrf2	PF02082.20	gi|298674327|ref|YP_003726077.1|	-	0.051	13.9	0.0	0.1	13.0	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
HrcA_DNA-bdg	PF03444.15	gi|298674327|ref|YP_003726077.1|	-	0.068	12.8	0.0	0.17	11.5	0.0	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HTH_28	PF13518.6	gi|298674327|ref|YP_003726077.1|	-	0.076	13.1	0.0	0.13	12.5	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
MarR	PF01047.22	gi|298674327|ref|YP_003726077.1|	-	0.079	12.9	0.1	0.14	12.1	0.1	1.4	1	0	0	1	1	1	0	MarR	family
ArsR	PF09824.9	gi|298674327|ref|YP_003726077.1|	-	0.1	12.2	1.6	0.44	10.1	0.0	2.4	2	1	1	3	3	3	0	ArsR	transcriptional	regulator
AIM24	PF01987.17	gi|298674329|ref|YP_003726079.1|	-	6e-34	117.6	0.0	7.2e-34	117.3	0.0	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
DUF4139	PF13598.6	gi|298674330|ref|YP_003726080.1|	-	0.00011	22.0	3.9	0.00017	21.4	1.7	2.3	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4139)
DUF150_C	PF17384.2	gi|298674330|ref|YP_003726080.1|	-	0.0031	17.6	0.9	0.0082	16.3	0.0	2.2	2	1	0	2	2	2	1	RimP	C-terminal	SH3	domain
RMI2	PF16100.5	gi|298674330|ref|YP_003726080.1|	-	0.035	13.9	0.3	5.8	6.7	0.0	2.5	2	0	0	2	2	2	0	RecQ-mediated	genome	instability	protein	2
YtkA	PF13115.6	gi|298674330|ref|YP_003726080.1|	-	3.1	8.5	6.7	1.3	9.7	0.6	3.3	3	2	2	5	5	5	0	YtkA-like
UCR_6-4kD	PF08997.10	gi|298674331|ref|YP_003726081.1|	-	0.026	14.5	0.0	0.03	14.3	0.0	1.3	1	0	0	1	1	1	0	Ubiquinol-cytochrome	C	reductase	complex,	6.4kD	protein
Peptidase_U4	PF03419.13	gi|298674332|ref|YP_003726082.1|	-	0.013	14.8	5.2	0.018	14.4	5.2	1.2	1	0	0	1	1	1	0	Sporulation	factor	SpoIIGA
Heliorhodopsin	PF18761.1	gi|298674332|ref|YP_003726082.1|	-	0.029	13.7	2.7	0.053	12.8	0.7	2.0	1	1	1	2	2	2	0	Heliorhodopsin
Mannosyl_trans2	PF04188.13	gi|298674332|ref|YP_003726082.1|	-	0.039	13.3	2.4	0.061	12.6	2.4	1.3	1	0	0	1	1	1	0	Mannosyltransferase	(PIG-V)
Cadherin_C_2	PF16492.5	gi|298674332|ref|YP_003726082.1|	-	0.25	12.1	0.1	0.25	12.1	0.1	2.3	2	0	0	2	2	2	0	Cadherin	cytoplasmic	C-terminal
DUF1616	PF07760.11	gi|298674332|ref|YP_003726082.1|	-	2	7.7	9.0	2.7	7.3	5.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1616)
DUF981	PF06168.11	gi|298674332|ref|YP_003726082.1|	-	2.9	7.8	10.9	0.46	10.4	5.5	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF981)
Neurensin	PF14927.6	gi|298674332|ref|YP_003726082.1|	-	3.8	7.2	5.8	0.94	9.2	1.5	2.1	1	1	1	2	2	2	0	Neurensin
DUF202	PF02656.15	gi|298674332|ref|YP_003726082.1|	-	5.2	7.6	16.2	0.15	12.5	2.2	3.2	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF202)
DUF3784	PF12650.7	gi|298674332|ref|YP_003726082.1|	-	6.4	7.0	15.6	1.1	9.4	0.8	3.0	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF3784)
PLDc_N	PF13396.6	gi|298674334|ref|YP_003726084.1|	-	1.9e-13	50.1	0.9	1.9e-13	50.1	0.9	2.3	3	0	0	3	3	3	1	Phospholipase_D-nuclease	N-terminal
YbjM	PF11045.8	gi|298674334|ref|YP_003726084.1|	-	0.0028	17.8	1.7	0.0037	17.4	1.7	1.2	1	0	0	1	1	1	1	Putative	inner	membrane	protein	of	Enterobacteriaceae
DUF4203	PF13886.6	gi|298674334|ref|YP_003726084.1|	-	0.0031	17.2	2.5	0.0038	16.9	2.5	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4203)
DUF805	PF05656.14	gi|298674334|ref|YP_003726084.1|	-	0.14	12.6	2.2	0.17	12.3	2.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF805)
YfhO	PF09586.10	gi|298674334|ref|YP_003726084.1|	-	0.51	8.5	3.1	0.55	8.4	3.1	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
Caveolin	PF01146.17	gi|298674334|ref|YP_003726084.1|	-	0.79	9.7	7.1	1	9.3	7.0	1.4	1	1	0	1	1	1	0	Caveolin
DPM3	PF08285.11	gi|298674334|ref|YP_003726084.1|	-	0.94	9.7	5.5	0.17	12.1	1.4	1.7	1	1	1	2	2	2	0	Dolichol-phosphate	mannosyltransferase	subunit	3	(DPM3)
RseC_MucC	PF04246.12	gi|298674334|ref|YP_003726084.1|	-	1.6	8.7	5.9	1.4	8.9	3.4	1.8	1	1	1	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF2516	PF10724.9	gi|298674334|ref|YP_003726084.1|	-	2	8.7	8.5	0.22	11.9	3.9	1.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2516)
DUF4131	PF13567.6	gi|298674334|ref|YP_003726084.1|	-	5.5	6.6	10.8	58	3.3	11.0	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF4229	PF14012.6	gi|298674334|ref|YP_003726084.1|	-	8.7	6.5	12.4	2.5	8.3	7.8	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4229)
OrfB_IS605	PF01385.19	gi|298674335|ref|YP_003726085.1|	-	6e-24	84.6	0.2	1.8e-23	83.0	0.0	1.9	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674335|ref|YP_003726085.1|	-	1.6e-09	37.5	1.0	4.6e-09	36.1	0.2	2.2	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
DUF919	PF06034.11	gi|298674335|ref|YP_003726085.1|	-	0.00051	19.8	0.4	0.0014	18.5	0.4	1.7	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
Ydc2-catalyt	PF09159.10	gi|298674335|ref|YP_003726085.1|	-	0.056	13.2	0.1	0.1	12.3	0.1	1.4	1	0	0	1	1	1	0	Mitochondrial	resolvase	Ydc2	/	RNA	splicing	MRS1
RuvX	PF03652.15	gi|298674335|ref|YP_003726085.1|	-	0.075	13.4	0.0	0.18	12.2	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	resolvase
MARVEL	PF01284.23	gi|298674336|ref|YP_003726086.1|	-	0.29	11.1	6.4	0.09	12.8	3.3	1.7	2	0	0	2	2	2	0	Membrane-associating	domain
Col_cuticle_N	PF01484.17	gi|298674336|ref|YP_003726086.1|	-	1	9.4	3.5	1.4	9.1	0.1	2.3	2	0	0	2	2	2	0	Nematode	cuticle	collagen	N-terminal	domain
DUF4064	PF13273.6	gi|298674336|ref|YP_003726086.1|	-	1.4	9.2	8.5	0.17	12.2	2.2	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF3784	PF12650.7	gi|298674336|ref|YP_003726086.1|	-	4.8	7.4	10.6	0.27	11.5	1.2	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3784)
DUF1673	PF07895.11	gi|298674336|ref|YP_003726086.1|	-	7.3	6.2	7.1	6.7	6.4	2.5	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1673)
DUF3923	PF13061.6	gi|298674337|ref|YP_003726087.1|	-	0.037	14.1	1.7	0.05	13.7	1.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3923)
ERGIC_N	PF13850.6	gi|298674338|ref|YP_003726088.1|	-	0.046	14.1	0.8	0.048	14.0	0.8	1.1	1	0	0	1	1	1	0	Endoplasmic	Reticulum-Golgi	Intermediate	Compartment	(ERGIC)
DapB_N	PF01113.20	gi|298674338|ref|YP_003726088.1|	-	0.13	12.3	0.2	0.16	12.1	0.2	1.3	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
HATPase_c	PF02518.26	gi|298674339|ref|YP_003726089.1|	-	8.1e-23	81.1	0.4	4.6e-22	78.6	0.0	2.1	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HisKA	PF00512.25	gi|298674339|ref|YP_003726089.1|	-	2.4e-06	27.5	0.0	5.9e-06	26.2	0.0	1.7	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
HATPase_c_2	PF13581.6	gi|298674339|ref|YP_003726089.1|	-	7.9e-05	22.6	0.0	0.00022	21.2	0.0	1.8	1	1	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
Iso_dh	PF00180.20	gi|298674339|ref|YP_003726089.1|	-	0.039	13.1	0.5	0.1	11.7	0.4	1.5	1	1	1	2	2	2	0	Isocitrate/isopropylmalate	dehydrogenase
DUF4083	PF13314.6	gi|298674339|ref|YP_003726089.1|	-	1.4	8.9	11.4	2.7	8.0	0.2	3.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4083)
Methyltransf_31	PF13847.6	gi|298674339|ref|YP_003726089.1|	-	3.1	7.6	6.4	0.7	9.7	0.8	2.5	2	1	0	2	2	2	0	Methyltransferase	domain
CheW	PF01584.19	gi|298674340|ref|YP_003726090.1|	-	5.3e-38	129.8	3.5	6.2e-38	129.6	3.5	1.1	1	0	0	1	1	1	1	CheW-like	domain
MCPsignal	PF00015.21	gi|298674341|ref|YP_003726091.1|	-	1.8e-54	184.2	69.5	2.6e-50	170.6	26.2	5.2	2	1	4	6	6	5	4	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
PAS_4	PF08448.10	gi|298674341|ref|YP_003726091.1|	-	7e-33	113.2	0.0	3.8e-15	56.1	0.0	2.8	3	0	0	3	3	2	2	PAS	fold
PAS_9	PF13426.7	gi|298674341|ref|YP_003726091.1|	-	3.9e-25	88.1	3.3	3.7e-13	49.6	0.0	3.6	4	0	0	4	4	3	2	PAS	domain
PAS	PF00989.25	gi|298674341|ref|YP_003726091.1|	-	9.5e-17	61.0	0.0	3e-08	33.7	0.0	3.2	3	0	0	3	3	2	2	PAS	fold
PAS_10	PF13596.6	gi|298674341|ref|YP_003726091.1|	-	1.9e-09	38.1	5.9	0.01	16.4	0.0	5.5	4	2	0	4	4	4	2	PAS	domain
HAMP	PF00672.25	gi|298674341|ref|YP_003726091.1|	-	9.4e-09	35.5	12.2	7.7e-06	26.2	0.1	5.7	5	1	0	5	5	4	2	HAMP	domain
PhageMin_Tail	PF10145.9	gi|298674341|ref|YP_003726091.1|	-	5.3e-08	32.9	35.0	0.0031	17.4	10.4	3.5	3	0	0	3	3	3	2	Phage-related	minor	tail	protein
DUF948	PF06103.11	gi|298674341|ref|YP_003726091.1|	-	1.1e-07	32.0	54.1	0.0079	16.4	8.6	7.6	4	2	4	8	8	7	5	Bacterial	protein	of	unknown	function	(DUF948)
DUF1664	PF07889.12	gi|298674341|ref|YP_003726091.1|	-	1e-06	28.8	52.0	0.011	15.8	7.9	6.2	3	2	4	7	7	7	5	Protein	of	unknown	function	(DUF1664)
BLOC1_2	PF10046.9	gi|298674341|ref|YP_003726091.1|	-	4.2e-05	23.8	52.2	0.48	10.8	4.8	6.7	4	2	3	7	7	6	5	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
CheZ	PF04344.13	gi|298674341|ref|YP_003726091.1|	-	4.5e-05	23.4	35.1	0.035	14.0	8.7	4.6	3	1	2	5	5	4	3	Chemotaxis	phosphatase,	CheZ
YkyA	PF10368.9	gi|298674341|ref|YP_003726091.1|	-	9.8e-05	22.1	41.4	0.0064	16.2	16.3	3.3	2	1	0	2	2	2	2	Putative	cell-wall	binding	lipoprotein
Med30	PF11315.8	gi|298674341|ref|YP_003726091.1|	-	0.0002	21.6	23.9	0.027	14.7	7.0	3.8	2	2	1	3	3	3	2	Mediator	complex	subunit	30
EzrA	PF06160.12	gi|298674341|ref|YP_003726091.1|	-	0.00037	18.8	39.4	0.00085	17.6	17.1	2.7	3	0	0	3	3	3	2	Septation	ring	formation	regulator,	EzrA
DUF773	PF05600.12	gi|298674341|ref|YP_003726091.1|	-	0.00038	19.3	9.8	0.00038	19.3	9.8	3.0	2	1	1	3	3	3	1	CDK5	regulatory	subunit-associated	protein	3
PAS_8	PF13188.7	gi|298674341|ref|YP_003726091.1|	-	0.0004	20.3	0.0	0.32	11.1	0.0	2.8	2	0	0	2	2	2	1	PAS	domain
WXG100	PF06013.12	gi|298674341|ref|YP_003726091.1|	-	0.0006	20.0	37.5	1.2	9.4	4.0	7.6	3	2	4	7	7	7	2	Proteins	of	100	residues	with	WXG
Collagen_mid	PF15984.5	gi|298674341|ref|YP_003726091.1|	-	0.0011	18.7	23.6	0.041	13.6	9.1	2.9	3	0	0	3	3	2	2	Bacterial	collagen,	middle	region
Sec34	PF04136.15	gi|298674341|ref|YP_003726091.1|	-	0.0012	18.7	39.1	0.33	10.8	5.9	4.9	2	2	2	4	4	4	2	Sec34-like	family
Laminin_II	PF06009.12	gi|298674341|ref|YP_003726091.1|	-	0.0014	18.6	62.7	0.013	15.5	7.0	6.1	4	2	3	7	7	6	4	Laminin	Domain	II
FPP	PF05911.11	gi|298674341|ref|YP_003726091.1|	-	0.0019	16.5	45.8	0.0033	15.7	45.8	1.3	1	0	0	1	1	1	1	Filament-like	plant	protein,	long	coiled-coil
PAS_3	PF08447.12	gi|298674341|ref|YP_003726091.1|	-	0.0023	18.2	0.0	3.9	7.8	0.0	2.7	2	0	0	2	2	2	0	PAS	fold
AAA_13	PF13166.6	gi|298674341|ref|YP_003726091.1|	-	0.0034	16.1	43.4	0.014	14.0	20.4	2.4	1	1	1	2	2	2	2	AAA	domain
Prominin	PF05478.11	gi|298674341|ref|YP_003726091.1|	-	0.0067	14.4	39.1	0.0048	14.9	19.3	3.2	1	1	2	3	3	3	2	Prominin
Spc7	PF08317.11	gi|298674341|ref|YP_003726091.1|	-	0.0083	15.0	47.0	0.22	10.4	14.4	3.7	1	1	2	3	3	3	2	Spc7	kinetochore	protein
DUF4200	PF13863.6	gi|298674341|ref|YP_003726091.1|	-	0.014	15.8	4.1	0.014	15.8	4.1	4.7	2	1	3	5	5	4	0	Domain	of	unknown	function	(DUF4200)
APG17	PF04108.12	gi|298674341|ref|YP_003726091.1|	-	0.015	14.5	44.0	0.14	11.2	4.4	3.7	1	1	1	3	3	3	0	Autophagy	protein	Apg17
DUF3584	PF12128.8	gi|298674341|ref|YP_003726091.1|	-	0.028	11.9	37.2	0.05	11.1	37.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
MAD	PF05557.13	gi|298674341|ref|YP_003726091.1|	-	0.057	11.8	43.8	0.72	8.1	20.6	2.4	1	1	1	2	2	2	0	Mitotic	checkpoint	protein
RmuC	PF02646.16	gi|298674341|ref|YP_003726091.1|	-	0.06	12.5	38.2	0.51	9.4	0.8	4.9	2	2	3	5	5	5	0	RmuC	family
BAR_3	PF16746.5	gi|298674341|ref|YP_003726091.1|	-	0.062	13.0	0.2	0.062	13.0	0.2	4.0	2	2	0	3	3	3	0	BAR	domain	of	APPL	family
RPW8	PF05659.11	gi|298674341|ref|YP_003726091.1|	-	0.092	12.4	22.6	2.1	8.0	1.3	5.6	2	2	2	4	4	4	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
KASH_CCD	PF14662.6	gi|298674341|ref|YP_003726091.1|	-	0.13	12.1	39.3	0.42	10.4	10.8	3.4	2	1	1	3	3	3	0	Coiled-coil	region	of	CCDC155	or	KASH
Syntaxin-6_N	PF09177.11	gi|298674341|ref|YP_003726091.1|	-	0.21	12.1	46.8	2.8	8.5	1.1	5.3	3	2	3	6	6	5	0	Syntaxin	6,	N-terminal
DUF2203	PF09969.9	gi|298674341|ref|YP_003726091.1|	-	0.27	11.9	35.8	1.5	9.5	2.4	5.3	2	1	3	6	6	5	0	Uncharacterized	conserved	protein	(DUF2203)
FUSC	PF04632.12	gi|298674341|ref|YP_003726091.1|	-	0.31	9.5	6.6	0.94	7.9	1.2	2.2	1	1	1	2	2	2	0	Fusaric	acid	resistance	protein	family
FlgN	PF05130.12	gi|298674341|ref|YP_003726091.1|	-	0.33	11.4	34.6	0.94	10.0	6.9	3.9	1	1	2	4	4	4	0	FlgN	protein
Syntaxin_2	PF14523.6	gi|298674341|ref|YP_003726091.1|	-	0.34	11.3	50.8	0.99	9.8	6.3	6.5	2	1	4	6	6	5	0	Syntaxin-like	protein
DUF3158	PF11358.8	gi|298674341|ref|YP_003726091.1|	-	0.34	10.6	3.3	0.39	10.4	0.1	2.7	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF3158)
TetR_C_18	PF17923.1	gi|298674341|ref|YP_003726091.1|	-	0.43	11.1	4.1	0.58	10.7	0.3	3.0	1	1	0	2	2	2	0	Tetracyclin	repressor-like,	C-terminal	domain
Seryl_tRNA_N	PF02403.22	gi|298674341|ref|YP_003726091.1|	-	0.58	10.4	45.8	0.21	11.9	6.8	5.7	2	1	3	6	6	5	0	Seryl-tRNA	synthetase	N-terminal	domain
H-kinase_dim	PF02895.14	gi|298674341|ref|YP_003726091.1|	-	0.68	10.4	40.8	6.3	7.3	0.6	8.0	2	1	3	5	5	3	0	Signal	transducing	histidine	kinase,	homodimeric	domain
DUF812	PF05667.11	gi|298674341|ref|YP_003726091.1|	-	0.79	8.5	49.4	1.7	7.4	30.8	2.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
Snapin_Pallidin	PF14712.6	gi|298674341|ref|YP_003726091.1|	-	0.85	10.1	38.9	0.65	10.5	0.5	5.6	4	2	2	6	6	4	0	Snapin/Pallidin
Serine_rich	PF08824.10	gi|298674341|ref|YP_003726091.1|	-	1.2	9.2	33.3	0.19	11.7	1.4	4.9	3	2	3	6	6	5	0	Serine	rich	protein	interaction	domain
T7SS_ESX_EspC	PF10824.8	gi|298674341|ref|YP_003726091.1|	-	1.4	9.4	25.7	2.6	8.5	0.6	5.2	2	2	1	4	4	4	0	Excreted	virulence	factor	EspC,	type	VII	ESX	diderm
DASH_Duo1	PF08651.10	gi|298674341|ref|YP_003726091.1|	-	1.7	8.5	39.0	0.099	12.4	2.9	8.1	4	2	3	8	8	8	0	DASH	complex	subunit	Duo1
AIP3	PF03915.13	gi|298674341|ref|YP_003726091.1|	-	1.7	7.6	49.7	2.4	7.1	24.0	3.0	1	1	2	3	3	3	0	Actin	interacting	protein	3
DUF3450	PF11932.8	gi|298674341|ref|YP_003726091.1|	-	2.2	7.5	48.0	0.036	13.4	12.9	4.3	2	2	2	4	4	4	0	Protein	of	unknown	function	(DUF3450)
GldM_N	PF12081.8	gi|298674341|ref|YP_003726091.1|	-	2.3	8.3	47.6	0.54	10.3	5.9	4.6	2	1	3	5	5	4	0	GldM	N-terminal	domain
CALCOCO1	PF07888.11	gi|298674341|ref|YP_003726091.1|	-	3.1	6.6	38.2	2	7.2	17.8	2.6	1	1	1	2	2	2	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
COG2	PF06148.11	gi|298674341|ref|YP_003726091.1|	-	4	7.5	41.0	0.13	12.3	2.2	6.1	3	2	2	5	5	4	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
NPV_P10	PF05531.12	gi|298674341|ref|YP_003726091.1|	-	4.1	7.9	58.0	0.4	11.2	4.2	8.2	5	4	3	8	8	7	0	Nucleopolyhedrovirus	P10	protein
DUF677	PF05055.12	gi|298674341|ref|YP_003726091.1|	-	4.2	6.2	36.8	4.1e+02	-0.4	0.1	4.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF677)
IFT57	PF10498.9	gi|298674341|ref|YP_003726091.1|	-	4.4	6.2	53.3	0.028	13.4	4.8	4.2	3	2	1	4	4	3	0	Intra-flagellar	transport	protein	57
CorA	PF01544.18	gi|298674341|ref|YP_003726091.1|	-	5	6.4	23.6	5.1	6.3	2.5	3.8	1	1	2	3	3	3	0	CorA-like	Mg2+	transporter	protein
Mer2	PF09074.10	gi|298674341|ref|YP_003726091.1|	-	5	6.9	56.7	0.032	14.1	21.4	4.5	3	2	2	5	5	5	0	Mer2
Rx_N	PF18052.1	gi|298674341|ref|YP_003726091.1|	-	5.1	7.4	20.0	3.3	8.0	3.1	4.4	3	1	1	4	4	3	0	Rx	N-terminal	domain
TMPIT	PF07851.13	gi|298674341|ref|YP_003726091.1|	-	7.5	5.7	47.0	0.31	10.3	9.0	4.4	2	1	4	6	6	5	0	TMPIT-like	protein
ATG16	PF08614.11	gi|298674341|ref|YP_003726091.1|	-	8.4	6.6	49.9	1.2	9.3	7.1	3.8	2	1	2	4	4	3	0	Autophagy	protein	16	(ATG16)
Filament	PF00038.21	gi|298674341|ref|YP_003726091.1|	-	8.5	5.9	44.1	0.043	13.4	17.4	3.6	1	1	2	3	3	3	0	Intermediate	filament	protein
ING	PF12998.7	gi|298674341|ref|YP_003726091.1|	-	9.7	6.9	29.1	9.9	6.8	12.2	4.7	3	2	0	3	3	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
HATPase_c	PF02518.26	gi|298674342|ref|YP_003726092.1|	-	1.4e-23	83.5	0.1	1.4e-23	83.5	0.1	2.1	3	0	0	3	3	3	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_4	PF08448.10	gi|298674342|ref|YP_003726092.1|	-	1e-08	35.4	0.2	8.9e-08	32.4	0.0	2.4	2	1	0	2	2	2	1	PAS	fold
HisKA	PF00512.25	gi|298674342|ref|YP_003726092.1|	-	1.2e-05	25.3	0.1	4e-05	23.6	0.0	2.0	2	0	0	2	2	2	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_9	PF13426.7	gi|298674342|ref|YP_003726092.1|	-	0.00016	21.9	0.2	0.0046	17.2	0.0	2.8	2	2	1	3	3	3	1	PAS	domain
PAS	PF00989.25	gi|298674342|ref|YP_003726092.1|	-	0.0039	17.2	0.0	0.01	15.8	0.0	1.7	1	0	0	1	1	1	1	PAS	fold
HATPase_c_2	PF13581.6	gi|298674342|ref|YP_003726092.1|	-	0.014	15.4	0.0	0.051	13.5	0.0	2.0	2	0	0	2	2	2	0	Histidine	kinase-like	ATPase	domain
HATPase_c_5	PF14501.6	gi|298674342|ref|YP_003726092.1|	-	0.015	15.2	0.3	0.063	13.2	0.0	2.1	2	0	0	2	2	2	0	GHKL	domain
PAS_8	PF13188.7	gi|298674342|ref|YP_003726092.1|	-	0.024	14.6	0.3	0.21	11.6	0.0	2.4	2	0	0	2	2	2	0	PAS	domain
HATPase_c_3	PF13589.6	gi|298674342|ref|YP_003726092.1|	-	0.051	13.4	0.1	0.1	12.4	0.1	1.6	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Peptidase_S66	PF02016.15	gi|298674342|ref|YP_003726092.1|	-	0.18	11.9	0.0	0.35	11.0	0.0	1.4	1	0	0	1	1	1	0	LD-carboxypeptidase	N-terminal	domain
PAS_8	PF13188.7	gi|298674343|ref|YP_003726093.1|	-	4e-14	52.3	0.0	1.2e-05	25.2	0.0	2.2	2	0	0	2	2	2	2	PAS	domain
PAS_4	PF08448.10	gi|298674343|ref|YP_003726093.1|	-	9.6e-12	45.1	0.0	5.8e-06	26.5	0.0	2.3	2	0	0	2	2	2	2	PAS	fold
PAS	PF00989.25	gi|298674343|ref|YP_003726093.1|	-	2.3e-09	37.3	0.0	0.00026	21.0	0.0	2.3	2	0	0	2	2	2	2	PAS	fold
PAS_9	PF13426.7	gi|298674343|ref|YP_003726093.1|	-	1.3e-07	31.8	0.0	0.0061	16.8	0.0	2.8	2	1	0	2	2	2	2	PAS	domain
PAS_9	PF13426.7	gi|298674344|ref|YP_003726094.1|	-	3.3e-41	139.8	6.6	8.2e-16	58.2	0.9	3.8	4	0	0	4	4	3	3	PAS	domain
PAS	PF00989.25	gi|298674344|ref|YP_003726094.1|	-	2.3e-36	124.2	0.0	4.9e-13	49.1	0.0	3.8	3	1	0	3	3	3	3	PAS	fold
HATPase_c	PF02518.26	gi|298674344|ref|YP_003726094.1|	-	1.3e-32	112.6	0.2	1.1e-31	109.7	0.1	2.2	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_3	PF08447.12	gi|298674344|ref|YP_003726094.1|	-	4.8e-26	90.9	0.7	4.8e-14	52.4	0.0	4.1	4	1	0	4	4	4	3	PAS	fold
PAS_8	PF13188.7	gi|298674344|ref|YP_003726094.1|	-	3.1e-20	71.8	0.0	3.5e-06	26.9	0.0	3.6	3	0	0	3	3	3	3	PAS	domain
HisKA	PF00512.25	gi|298674344|ref|YP_003726094.1|	-	9.5e-20	70.4	0.2	4.6e-19	68.2	0.1	2.3	2	0	0	2	2	2	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_4	PF08448.10	gi|298674344|ref|YP_003726094.1|	-	1.7e-17	63.6	0.0	0.0002	21.5	0.0	4.0	4	0	0	4	4	3	3	PAS	fold
GAF_2	PF13185.6	gi|298674344|ref|YP_003726094.1|	-	8.2e-16	58.5	0.0	1.5e-15	57.7	0.0	1.5	1	0	0	1	1	1	1	GAF	domain
PAS_11	PF14598.6	gi|298674344|ref|YP_003726094.1|	-	7.8e-09	35.7	0.9	4e-06	26.9	0.0	3.6	3	0	0	3	3	3	1	PAS	domain
PAS_12	PF18095.1	gi|298674344|ref|YP_003726094.1|	-	6.3e-08	32.4	1.3	0.17	11.5	0.0	3.7	2	1	0	3	3	3	3	UPF0242	C-terminal	PAS-like	domain
PAS_10	PF13596.6	gi|298674344|ref|YP_003726094.1|	-	4.7e-07	30.4	3.8	0.054	14.1	0.1	4.0	3	1	0	3	3	3	2	PAS	domain
GAF_3	PF13492.6	gi|298674344|ref|YP_003726094.1|	-	7.2e-05	23.1	0.0	0.00017	21.9	0.0	1.7	1	1	0	1	1	1	1	GAF	domain
GAF	PF01590.26	gi|298674344|ref|YP_003726094.1|	-	8.5e-05	23.2	0.0	0.00016	22.3	0.0	1.5	1	0	0	1	1	1	1	GAF	domain
HATPase_c_5	PF14501.6	gi|298674344|ref|YP_003726094.1|	-	0.00082	19.2	0.0	0.0038	17.1	0.0	2.1	1	0	0	1	1	1	1	GHKL	domain
PAS_7	PF12860.7	gi|298674344|ref|YP_003726094.1|	-	0.0013	18.8	0.0	2.9	8.1	0.0	3.7	3	2	0	3	3	3	2	PAS	fold
HATPase_c_2	PF13581.6	gi|298674344|ref|YP_003726094.1|	-	0.017	15.1	0.0	0.038	14.0	0.0	1.5	1	0	0	1	1	1	0	Histidine	kinase-like	ATPase	domain
VCBS	PF13517.6	gi|298674345|ref|YP_003726095.1|	-	9.1e-14	51.8	11.6	4.8e-10	39.9	1.7	2.4	1	1	1	2	2	2	2	Repeat	domain	in	Vibrio,	Colwellia,	Bradyrhizobium	and	Shewanella
FG-GAP	PF01839.23	gi|298674345|ref|YP_003726095.1|	-	3.6e-06	27.0	4.1	0.011	15.8	0.0	2.8	3	0	0	3	3	3	2	FG-GAP	repeat
RRXRR	PF14239.6	gi|298674346|ref|YP_003726096.1|	-	1.4e-69	233.4	1.2	2e-69	232.9	1.2	1.2	1	0	0	1	1	1	1	RRXRR	protein
HNH_5	PF14279.6	gi|298674346|ref|YP_003726096.1|	-	7.6e-15	54.5	0.9	1.5e-14	53.6	0.9	1.5	1	0	0	1	1	1	1	HNH	endonuclease
HNH_4	PF13395.6	gi|298674346|ref|YP_003726096.1|	-	1.3e-11	44.2	0.2	3.9e-11	42.7	0.2	1.9	1	1	0	1	1	1	1	HNH	endonuclease
HNH	PF01844.23	gi|298674346|ref|YP_003726096.1|	-	1.6e-11	44.2	1.6	1.6e-11	44.2	1.6	2.2	2	0	0	2	2	2	1	HNH	endonuclease
Glyco_hydro_67M	PF07488.12	gi|298674346|ref|YP_003726096.1|	-	0.014	14.5	0.0	0.024	13.7	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	67	middle	domain
SH3_2	PF07653.17	gi|298674346|ref|YP_003726096.1|	-	0.015	15.0	0.2	0.19	11.5	0.1	2.5	1	1	1	2	2	2	0	Variant	SH3	domain
zf-CHCC	PF10276.9	gi|298674346|ref|YP_003726096.1|	-	0.067	13.3	0.4	8.2	6.6	0.2	2.7	2	0	0	2	2	2	0	Zinc-finger	domain
HLH	PF00010.26	gi|298674346|ref|YP_003726096.1|	-	0.1	12.6	0.0	0.1	12.6	0.0	2.5	2	0	0	2	2	2	0	Helix-loop-helix	DNA-binding	domain
TcfC	PF16967.5	gi|298674347|ref|YP_003726097.1|	-	0.0013	18.2	0.0	0.033	13.7	0.0	2.5	2	0	0	2	2	2	1	E-set	like	domain
Glyco_hydro_2	PF00703.21	gi|298674347|ref|YP_003726097.1|	-	0.016	15.9	0.4	1.2	9.8	0.1	2.6	2	0	0	2	2	2	0	Glycosyl	hydrolases	family	2
MacB_PCD	PF12704.7	gi|298674348|ref|YP_003726098.1|	-	1.1e-13	52.0	1.4	1.1e-13	52.0	1.4	2.0	2	0	0	2	2	2	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.21	gi|298674348|ref|YP_003726098.1|	-	2.8e-13	50.1	4.0	2.8e-13	50.1	4.0	2.5	3	0	0	3	3	3	1	FtsX-like	permease	family
FtsX	PF02687.21	gi|298674349|ref|YP_003726099.1|	-	2.8e-16	59.8	3.9	2.8e-16	59.8	3.9	3.0	3	0	0	3	3	3	1	FtsX-like	permease	family
MacB_PCD	PF12704.7	gi|298674349|ref|YP_003726099.1|	-	2.5e-14	54.1	0.4	3.8e-14	53.5	0.4	1.2	1	0	0	1	1	1	1	MacB-like	periplasmic	core	domain
CbiM	PF01891.16	gi|298674349|ref|YP_003726099.1|	-	1.3	8.8	10.9	0.83	9.5	7.0	2.0	2	0	0	2	2	2	0	Cobalt	uptake	substrate-specific	transmembrane	region
ABC_tran	PF00005.27	gi|298674350|ref|YP_003726100.1|	-	4.5e-35	121.2	0.0	6.7e-35	120.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|298674350|ref|YP_003726100.1|	-	8.2e-09	35.2	0.4	3e-07	30.1	0.4	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|298674350|ref|YP_003726100.1|	-	1.2e-08	35.2	0.5	0.00091	19.1	0.3	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|298674350|ref|YP_003726100.1|	-	2.3e-05	24.0	0.3	4.9e-05	23.0	0.3	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|298674350|ref|YP_003726100.1|	-	0.00085	19.6	0.3	0.0076	16.5	0.3	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|298674350|ref|YP_003726100.1|	-	0.0012	18.6	0.2	0.0063	16.3	0.1	1.8	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_25	PF13481.6	gi|298674350|ref|YP_003726100.1|	-	0.0035	16.9	0.0	0.29	10.7	0.1	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.6	gi|298674350|ref|YP_003726100.1|	-	0.0038	17.8	1.4	0.0067	16.9	0.4	1.8	2	0	0	2	2	2	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|298674350|ref|YP_003726100.1|	-	0.0038	17.1	0.1	0.0083	16.0	0.1	1.6	1	0	0	1	1	1	1	RsgA	GTPase
AAA_16	PF13191.6	gi|298674350|ref|YP_003726100.1|	-	0.0044	17.4	0.0	0.0081	16.6	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
Rad17	PF03215.15	gi|298674350|ref|YP_003726100.1|	-	0.0055	16.6	0.1	0.023	14.6	0.1	2.0	1	1	0	1	1	1	1	Rad17	P-loop	domain
Mg_chelatase	PF01078.21	gi|298674350|ref|YP_003726100.1|	-	0.0067	15.8	0.0	0.011	15.1	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_30	PF13604.6	gi|298674350|ref|YP_003726100.1|	-	0.0095	15.7	0.1	0.17	11.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
ATPase	PF06745.13	gi|298674350|ref|YP_003726100.1|	-	0.016	14.6	0.9	2.5	7.4	0.1	2.6	3	0	0	3	3	3	0	KaiC
AAA_33	PF13671.6	gi|298674350|ref|YP_003726100.1|	-	0.02	15.1	0.6	0.089	12.9	0.6	2.0	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|298674350|ref|YP_003726100.1|	-	0.021	14.5	0.0	0.17	11.6	0.0	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
T4SS-DNA_transf	PF02534.14	gi|298674350|ref|YP_003726100.1|	-	0.043	12.6	0.0	0.058	12.2	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretory	system	Conjugative	DNA	transfer
RNA12	PF10443.9	gi|298674350|ref|YP_003726100.1|	-	0.047	12.4	0.0	0.063	12.0	0.0	1.2	1	0	0	1	1	1	0	RNA12	protein
AAA_18	PF13238.6	gi|298674350|ref|YP_003726100.1|	-	0.067	13.7	0.0	0.33	11.5	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|298674350|ref|YP_003726100.1|	-	0.082	12.8	0.1	0.29	11.1	0.1	1.9	2	0	0	2	2	2	0	NACHT	domain
PIN_4	PF13638.6	gi|298674350|ref|YP_003726100.1|	-	0.096	13.0	0.1	0.15	12.4	0.1	1.4	1	1	0	1	1	1	0	PIN	domain
AAA_28	PF13521.6	gi|298674350|ref|YP_003726100.1|	-	0.099	12.9	0.0	0.8	9.9	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
cobW	PF02492.19	gi|298674350|ref|YP_003726100.1|	-	0.11	12.1	0.2	0.14	11.7	0.2	1.6	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_24	PF13479.6	gi|298674350|ref|YP_003726100.1|	-	0.11	12.2	0.1	0.39	10.4	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.22	gi|298674350|ref|YP_003726100.1|	-	0.17	11.0	0.7	0.34	10.1	0.2	1.6	2	0	0	2	2	2	0	NB-ARC	domain
CitMHS	PF03600.16	gi|298674351|ref|YP_003726101.1|	-	0.081	12.1	0.8	0.093	11.9	0.8	1.0	1	0	0	1	1	1	0	Citrate	transporter
HTH_23	PF13384.6	gi|298674352|ref|YP_003726102.1|	-	1.7e-06	27.7	0.0	3.3e-06	26.7	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
Terminase_5	PF06056.12	gi|298674352|ref|YP_003726102.1|	-	1.8e-06	27.7	0.0	2.7e-06	27.1	0.0	1.3	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_28	PF13518.6	gi|298674352|ref|YP_003726102.1|	-	0.00012	22.1	0.0	0.00019	21.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Zn_Tnp_IS1	PF03811.13	gi|298674352|ref|YP_003726102.1|	-	0.0025	17.5	4.7	0.0041	16.8	4.7	1.4	1	0	0	1	1	1	1	InsA	N-terminal	domain
HTH_38	PF13936.6	gi|298674352|ref|YP_003726102.1|	-	0.0028	17.4	0.0	0.0067	16.2	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_1	PF01527.20	gi|298674352|ref|YP_003726102.1|	-	0.0039	17.5	0.0	0.0058	16.9	0.0	1.3	1	0	0	1	1	1	1	Transposase
Zn-ribbon_8	PF09723.10	gi|298674352|ref|YP_003726102.1|	-	0.0073	16.4	1.8	0.27	11.4	0.1	2.3	2	0	0	2	2	2	1	Zinc	ribbon	domain
Sigma70_r4_2	PF08281.12	gi|298674352|ref|YP_003726102.1|	-	0.0076	15.9	0.0	0.015	14.9	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Zn_Tnp_IS1595	PF12760.7	gi|298674352|ref|YP_003726102.1|	-	0.0088	16.0	3.8	0.014	15.4	3.8	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
HTH_29	PF13551.6	gi|298674352|ref|YP_003726102.1|	-	0.0093	16.0	0.0	0.018	15.0	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn	helix
RNA_POL_M_15KD	PF02150.16	gi|298674352|ref|YP_003726102.1|	-	0.017	14.9	3.6	0.035	14.0	3.6	1.4	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
DUF2387	PF09526.10	gi|298674352|ref|YP_003726102.1|	-	0.041	14.0	0.3	0.083	13.0	0.3	1.5	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
IBR	PF01485.21	gi|298674352|ref|YP_003726102.1|	-	0.045	14.0	2.4	0.072	13.3	2.4	1.3	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
Lar_restr_allev	PF14354.6	gi|298674352|ref|YP_003726102.1|	-	0.085	13.2	0.7	0.14	12.5	0.7	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-Mss51	PF13824.6	gi|298674352|ref|YP_003726102.1|	-	0.096	12.8	1.4	0.23	11.6	1.4	1.6	1	0	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
HTH_50	PF18024.1	gi|298674352|ref|YP_003726102.1|	-	0.1	12.2	0.1	0.22	11.1	0.0	1.7	2	0	0	2	2	1	0	Helix-turn-helix	domain
UPF0547	PF10571.9	gi|298674352|ref|YP_003726102.1|	-	0.91	9.7	5.8	0.99	9.6	0.8	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
OrfB_Zn_ribbon	PF07282.11	gi|298674352|ref|YP_003726102.1|	-	1	9.3	4.3	1.7	8.7	2.7	2.0	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-C2H2	PF00096.26	gi|298674352|ref|YP_003726102.1|	-	1	10.0	6.0	0.33	11.5	1.1	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-TFIIB	PF13453.6	gi|298674352|ref|YP_003726102.1|	-	2	7.8	5.2	0.79	9.1	2.0	2.0	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
zf-H2C2_2	PF13465.6	gi|298674352|ref|YP_003726102.1|	-	2.2	8.8	6.4	1.3	9.6	0.6	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-ISL3	PF14690.6	gi|298674352|ref|YP_003726102.1|	-	2.5	8.8	10.2	1.5	9.6	1.1	2.4	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rubredoxin_2	PF18073.1	gi|298674352|ref|YP_003726102.1|	-	3.7	7.3	8.2	5.3	6.8	1.4	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
DDE_Tnp_IS1	PF03400.13	gi|298674353|ref|YP_003726103.1|	-	3.8e-10	40.2	0.1	4e-10	40.1	0.1	1.0	1	0	0	1	1	1	1	IS1	transposase
TERT_thumb	PF17984.1	gi|298674353|ref|YP_003726103.1|	-	0.038	13.9	0.1	0.041	13.8	0.1	1.1	1	0	0	1	1	1	0	Telomerase	reverse	transcriptase	thumb	DNA	binding	domain
TM_helix	PF05552.12	gi|298674354|ref|YP_003726104.1|	-	1.5e-21	76.1	18.8	1.7e-10	40.7	3.0	4.8	7	0	0	7	7	7	3	Conserved	TM	helix
Pex24p	PF06398.11	gi|298674354|ref|YP_003726104.1|	-	0.21	10.6	0.0	0.66	8.9	0.0	1.7	1	1	0	1	1	1	0	Integral	peroxisomal	membrane	peroxin
ArsR	PF09824.9	gi|298674355|ref|YP_003726105.1|	-	0.006	16.2	0.1	0.0075	15.9	0.1	1.1	1	0	0	1	1	1	1	ArsR	transcriptional	regulator
Rrf2	PF02082.20	gi|298674355|ref|YP_003726105.1|	-	0.012	16.0	0.0	0.016	15.6	0.0	1.1	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_11	PF08279.12	gi|298674355|ref|YP_003726105.1|	-	0.022	14.7	0.0	0.05	13.6	0.0	1.6	1	1	0	1	1	1	0	HTH	domain
GntR	PF00392.21	gi|298674355|ref|YP_003726105.1|	-	0.044	13.4	0.0	0.085	12.5	0.0	1.3	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DUF3782	PF12644.7	gi|298674355|ref|YP_003726105.1|	-	0.094	12.9	0.0	0.12	12.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
DDE_3	PF13358.6	gi|298674356|ref|YP_003726106.1|	-	1.3e-23	83.4	0.1	1.9e-23	82.9	0.1	1.2	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
DDE_1	PF03184.19	gi|298674356|ref|YP_003726106.1|	-	4.7e-05	23.1	0.0	7.5e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
rve	PF00665.26	gi|298674356|ref|YP_003726106.1|	-	0.0089	16.2	0.0	0.033	14.4	0.0	1.8	1	1	1	2	2	2	1	Integrase	core	domain
HTH_32	PF13565.6	gi|298674357|ref|YP_003726107.1|	-	8.6e-17	61.5	0.4	1.4e-16	60.8	0.4	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_33	PF13592.6	gi|298674357|ref|YP_003726107.1|	-	7.1e-10	38.4	0.0	1.7e-09	37.2	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|298674357|ref|YP_003726107.1|	-	6.5e-09	35.7	0.1	2e-08	34.1	0.0	1.8	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|298674357|ref|YP_003726107.1|	-	3.6e-05	23.4	0.4	0.00037	20.2	0.1	2.5	3	0	0	3	3	3	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|298674357|ref|YP_003726107.1|	-	0.00055	20.0	0.4	0.0013	18.8	0.2	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
LZ_Tnp_IS481	PF13011.6	gi|298674357|ref|YP_003726107.1|	-	0.0023	18.4	0.1	0.0033	17.9	0.1	1.3	1	0	0	1	1	1	1	leucine-zipper	of	insertion	element	IS481
HTH_Tnp_Tc3_2	PF01498.18	gi|298674357|ref|YP_003726107.1|	-	0.055	13.7	0.0	0.1	12.9	0.0	1.5	1	0	0	1	1	1	0	Transposase
Methyltransf_25	PF13649.6	gi|298674358|ref|YP_003726108.1|	-	1.7e-16	60.7	0.0	3.1e-16	59.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298674358|ref|YP_003726108.1|	-	7.2e-11	42.6	0.0	1.2e-10	41.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298674358|ref|YP_003726108.1|	-	1.1e-10	41.6	0.0	1.3e-10	41.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|298674358|ref|YP_003726108.1|	-	2e-09	38.1	0.0	3.5e-09	37.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298674358|ref|YP_003726108.1|	-	2.9e-07	30.1	0.1	4.6e-07	29.4	0.1	1.3	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|298674358|ref|YP_003726108.1|	-	5.4e-07	29.6	0.0	7.5e-07	29.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|298674358|ref|YP_003726108.1|	-	0.00038	20.1	0.0	0.00055	19.5	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MTS	PF05175.14	gi|298674358|ref|YP_003726108.1|	-	0.0021	17.6	0.0	0.003	17.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
TehB	PF03848.14	gi|298674358|ref|YP_003726108.1|	-	0.0027	17.1	0.0	0.004	16.6	0.0	1.4	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
CheR	PF01739.18	gi|298674358|ref|YP_003726108.1|	-	0.016	14.7	0.0	0.04	13.4	0.0	1.6	1	1	1	2	2	2	0	CheR	methyltransferase,	SAM	binding	domain
PCMT	PF01135.19	gi|298674358|ref|YP_003726108.1|	-	0.019	14.7	0.0	0.028	14.2	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF1414	PF07208.11	gi|298674358|ref|YP_003726108.1|	-	0.02	14.9	0.1	0.11	12.5	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1414)
Bin3	PF06859.12	gi|298674358|ref|YP_003726108.1|	-	0.05	14.2	0.0	0.24	12.1	0.0	2.2	1	1	0	1	1	1	0	Bicoid-interacting	protein	3	(Bin3)
UPF0020	PF01170.18	gi|298674358|ref|YP_003726108.1|	-	0.063	12.9	0.0	0.092	12.4	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_32	PF13679.6	gi|298674358|ref|YP_003726108.1|	-	0.11	12.5	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
DUF4091	PF13320.6	gi|298674358|ref|YP_003726108.1|	-	0.11	12.6	0.1	0.27	11.4	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4091)
PyrI_C	PF02748.15	gi|298674359|ref|YP_003726109.1|	-	0.0055	16.6	0.5	0.012	15.5	0.5	1.6	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zinc_ribbon_5	PF13719.6	gi|298674359|ref|YP_003726109.1|	-	0.0084	15.8	1.3	0.04	13.7	0.2	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-C2H2_10	PF16588.5	gi|298674359|ref|YP_003726109.1|	-	0.011	15.4	1.4	0.032	13.9	1.4	1.8	1	0	0	1	1	1	0	C2H2	zinc-finger
zf-FCS	PF06467.14	gi|298674359|ref|YP_003726109.1|	-	0.013	15.5	7.0	1.4	8.9	7.0	2.3	1	1	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
APT	PF03440.14	gi|298674359|ref|YP_003726109.1|	-	0.12	12.3	0.1	0.17	11.9	0.1	1.2	1	0	0	1	1	1	0	Aerolysin/Pertussis	toxin	(APT)	domain
C1_2	PF03107.16	gi|298674359|ref|YP_003726109.1|	-	0.23	11.8	6.1	5.7	7.3	0.9	2.2	2	0	0	2	2	2	0	C1	domain
SNARE_assoc	PF09335.11	gi|298674360|ref|YP_003726110.1|	-	2e-08	34.7	2.5	2e-08	34.7	2.5	2.2	1	1	1	2	2	2	1	SNARE	associated	Golgi	protein
TPR_2	PF07719.17	gi|298674361|ref|YP_003726111.1|	-	1.6e-16	59.0	5.4	2.4e-05	24.1	0.4	4.3	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|298674361|ref|YP_003726111.1|	-	1.5e-14	54.2	1.3	8.6e-08	32.6	0.1	3.1	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|298674361|ref|YP_003726111.1|	-	1.6e-14	53.0	6.3	0.0001	22.0	0.4	4.3	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|298674361|ref|YP_003726111.1|	-	1e-13	50.6	2.9	6.7e-05	23.0	0.0	3.8	3	1	0	3	3	3	3	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|298674361|ref|YP_003726111.1|	-	3.2e-12	45.6	3.9	0.0022	18.0	0.0	4.4	4	1	1	5	5	5	3	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|298674361|ref|YP_003726111.1|	-	2.7e-11	43.4	0.0	8.7e-06	25.8	0.0	3.0	2	1	1	3	3	3	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|298674361|ref|YP_003726111.1|	-	9.6e-11	41.8	8.3	2.6e-05	24.4	1.1	2.9	1	1	3	4	4	4	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.6	gi|298674361|ref|YP_003726111.1|	-	6e-10	39.1	0.0	0.14	13.0	0.0	4.1	1	1	3	4	4	4	3	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.6	gi|298674361|ref|YP_003726111.1|	-	1.2e-09	38.1	6.0	0.006	16.6	0.1	4.2	2	1	2	4	4	4	3	Fis1	C-terminal	tetratricopeptide	repeat
TPR_16	PF13432.6	gi|298674361|ref|YP_003726111.1|	-	4.6e-09	36.8	0.0	0.0031	18.1	0.0	2.3	1	1	0	2	2	2	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|298674361|ref|YP_003726111.1|	-	1.4e-07	31.7	0.5	0.00024	21.3	0.0	3.3	1	1	2	3	3	3	2	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|298674361|ref|YP_003726111.1|	-	1.7e-06	28.3	0.4	5.6	7.8	0.0	4.4	4	1	0	4	4	4	2	Tetratricopeptide	repeat
SRP_TPR_like	PF17004.5	gi|298674361|ref|YP_003726111.1|	-	3.3e-06	27.1	0.4	1.5e-05	24.9	0.3	2.0	1	1	0	1	1	1	1	Putative	TPR-like	repeat
TPR_11	PF13414.6	gi|298674361|ref|YP_003726111.1|	-	1.4e-05	24.6	9.6	0.056	13.1	0.2	4.2	2	1	2	4	4	4	3	TPR	repeat
TPR_7	PF13176.6	gi|298674361|ref|YP_003726111.1|	-	0.00054	19.8	2.2	8.5	6.7	0.0	4.2	4	1	0	4	4	4	1	Tetratricopeptide	repeat
NARP1	PF12569.8	gi|298674361|ref|YP_003726111.1|	-	0.0011	18.0	2.6	0.016	14.2	0.7	2.2	1	1	1	2	2	2	1	NMDA	receptor-regulated	protein	1
TPR_10	PF13374.6	gi|298674361|ref|YP_003726111.1|	-	0.0016	18.3	0.4	11	6.0	0.1	4.1	4	0	0	4	4	4	0	Tetratricopeptide	repeat
SHNi-TPR	PF10516.9	gi|298674361|ref|YP_003726111.1|	-	0.0035	16.8	3.7	1.1	8.8	0.2	3.1	3	0	0	3	3	3	2	SHNi-TPR
DUF5588	PF17826.1	gi|298674361|ref|YP_003726111.1|	-	0.056	12.3	0.0	0.076	11.9	0.0	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5588)
DUF1699	PF08004.11	gi|298674362|ref|YP_003726112.1|	-	3.2e-64	214.4	0.8	3.6e-64	214.3	0.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1699)
Metalloenzyme	PF01676.18	gi|298674362|ref|YP_003726112.1|	-	0.06	12.7	0.1	0.069	12.5	0.1	1.2	1	0	0	1	1	1	0	Metalloenzyme	superfamily
VAPB_antitox	PF02697.14	gi|298674362|ref|YP_003726112.1|	-	0.065	14.0	0.8	0.065	14.0	0.8	1.9	2	0	0	2	2	2	0	Putative	antitoxin
eIF-1a	PF01176.19	gi|298674363|ref|YP_003726113.1|	-	1.3e-17	63.4	0.1	1.7e-17	63.0	0.1	1.2	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
mRNA_decap_C	PF16741.5	gi|298674364|ref|YP_003726114.1|	-	0.12	11.7	0.0	0.24	10.7	0.0	1.5	1	0	0	1	1	1	0	mRNA-decapping	enzyme	C-terminus
NnrU	PF07298.11	gi|298674365|ref|YP_003726115.1|	-	1.9e-08	34.1	4.2	2.7e-08	33.6	4.2	1.2	1	0	0	1	1	1	1	NnrU	protein
PEMT	PF04191.13	gi|298674365|ref|YP_003726115.1|	-	0.00084	19.7	1.6	0.0013	19.1	0.1	2.0	2	0	0	2	2	2	1	Phospholipid	methyltransferase
CbbQ_C	PF08406.10	gi|298674366|ref|YP_003726116.1|	-	2.4e-32	111.0	0.1	5.6e-32	109.9	0.0	1.6	2	0	0	2	2	2	1	CbbQ/NirQ/NorQ	C-terminal
AAA_5	PF07728.14	gi|298674366|ref|YP_003726116.1|	-	3.2e-31	108.2	0.0	4.4e-31	107.7	0.0	1.2	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_6	PF12774.7	gi|298674366|ref|YP_003726116.1|	-	0.00014	21.0	0.1	0.0043	16.1	0.0	2.1	2	0	0	2	2	2	1	Hydrolytic	ATP	binding	site	of	dynein	motor	region
AAA_3	PF07726.11	gi|298674366|ref|YP_003726116.1|	-	0.0027	17.6	0.0	0.0045	16.8	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.26	gi|298674366|ref|YP_003726116.1|	-	0.015	15.0	0.0	0.034	13.9	0.0	1.5	1	1	0	1	1	1	0	Sigma-54	interaction	domain
AAA_22	PF13401.6	gi|298674366|ref|YP_003726116.1|	-	0.016	15.5	0.0	0.033	14.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|298674366|ref|YP_003726116.1|	-	0.017	15.5	0.0	0.029	14.8	0.0	1.4	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.22	gi|298674366|ref|YP_003726116.1|	-	0.043	14.2	0.0	0.094	13.1	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_14	PF13173.6	gi|298674366|ref|YP_003726116.1|	-	0.058	13.4	0.0	0.1	12.6	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_7	PF12775.7	gi|298674366|ref|YP_003726116.1|	-	0.065	12.8	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
VWA_2	PF13519.6	gi|298674367|ref|YP_003726117.1|	-	1.1e-08	35.6	0.1	4.8e-08	33.6	0.0	2.2	3	0	0	3	3	3	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.28	gi|298674367|ref|YP_003726117.1|	-	5.8e-07	29.9	0.0	2.1e-06	28.1	0.0	2.0	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
EamA	PF00892.20	gi|298674368|ref|YP_003726118.1|	-	3.1e-19	69.5	48.8	1.5e-09	38.1	22.4	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
TMEM234	PF10639.9	gi|298674368|ref|YP_003726118.1|	-	0.061	13.4	12.4	0.14	12.2	0.6	3.2	2	1	1	3	3	3	0	Putative	transmembrane	family	234
AAA	PF00004.29	gi|298674369|ref|YP_003726119.1|	-	5.6e-43	146.5	1.8	1.5e-42	145.1	0.0	2.3	2	1	1	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|298674369|ref|YP_003726119.1|	-	9.7e-14	50.9	0.1	3.3e-13	49.2	0.0	1.9	2	0	0	2	2	1	1	AAA+	lid	domain
AAA_5	PF07728.14	gi|298674369|ref|YP_003726119.1|	-	2.2e-06	27.7	0.0	9.1e-06	25.7	0.0	2.1	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.12	gi|298674369|ref|YP_003726119.1|	-	1e-05	25.4	0.1	4.5e-05	23.3	0.0	2.1	3	0	0	3	3	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_16	PF13191.6	gi|298674369|ref|YP_003726119.1|	-	2.1e-05	25.0	0.0	0.00017	22.0	0.0	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.6	gi|298674369|ref|YP_003726119.1|	-	8.4e-05	23.0	0.5	0.03	14.7	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_2	PF07724.14	gi|298674369|ref|YP_003726119.1|	-	0.00016	21.8	0.0	0.00016	21.8	0.0	2.1	3	0	0	3	3	1	1	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.6	gi|298674369|ref|YP_003726119.1|	-	0.00024	21.4	0.0	0.0089	16.3	0.0	2.5	1	1	1	2	2	2	1	AAA	domain
AAA_14	PF13173.6	gi|298674369|ref|YP_003726119.1|	-	0.0018	18.3	0.1	0.0066	16.5	0.0	1.9	2	0	0	2	2	1	1	AAA	domain
AAA_18	PF13238.6	gi|298674369|ref|YP_003726119.1|	-	0.0028	18.2	0.4	0.031	14.8	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.22	gi|298674369|ref|YP_003726119.1|	-	0.0073	16.7	0.0	0.018	15.4	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
Mg_chelatase	PF01078.21	gi|298674369|ref|YP_003726119.1|	-	0.0077	15.6	0.0	0.018	14.4	0.0	1.5	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.17	gi|298674369|ref|YP_003726119.1|	-	0.008	15.9	0.0	0.018	14.8	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_33	PF13671.6	gi|298674369|ref|YP_003726119.1|	-	0.0089	16.2	0.2	0.023	14.8	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
TIP49	PF06068.13	gi|298674369|ref|YP_003726119.1|	-	0.011	15.0	0.0	0.025	13.8	0.0	1.5	1	0	0	1	1	1	0	TIP49	P-loop	domain
ATPase	PF06745.13	gi|298674369|ref|YP_003726119.1|	-	0.012	14.9	1.4	0.053	12.9	0.0	2.4	3	0	0	3	3	3	0	KaiC
Prot_ATP_OB_N	PF17758.1	gi|298674369|ref|YP_003726119.1|	-	0.016	14.9	3.0	0.021	14.5	1.1	2.1	2	0	0	2	2	2	0	Proteasomal	ATPase	OB	N-terminal	domain
Sigma54_activ_2	PF14532.6	gi|298674369|ref|YP_003726119.1|	-	0.02	15.0	0.0	0.065	13.3	0.0	1.9	2	0	0	2	2	1	0	Sigma-54	interaction	domain
AAA_24	PF13479.6	gi|298674369|ref|YP_003726119.1|	-	0.023	14.4	0.0	0.082	12.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
Sigma54_activat	PF00158.26	gi|298674369|ref|YP_003726119.1|	-	0.037	13.7	0.0	0.24	11.1	0.0	2.3	3	0	0	3	3	3	0	Sigma-54	interaction	domain
ADK	PF00406.22	gi|298674369|ref|YP_003726119.1|	-	0.041	14.0	1.3	3.1	7.9	0.0	2.3	2	0	0	2	2	2	0	Adenylate	kinase
DUF3450	PF11932.8	gi|298674369|ref|YP_003726119.1|	-	0.042	13.2	4.1	0.071	12.4	4.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
Taxilin	PF09728.9	gi|298674369|ref|YP_003726119.1|	-	0.054	12.7	2.8	0.083	12.1	2.8	1.2	1	0	0	1	1	1	0	Myosin-like	coiled-coil	protein
AAA_3	PF07726.11	gi|298674369|ref|YP_003726119.1|	-	0.065	13.1	0.0	0.15	11.9	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.12	gi|298674369|ref|YP_003726119.1|	-	0.068	12.4	0.0	0.16	11.2	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
Tup_N	PF08581.10	gi|298674369|ref|YP_003726119.1|	-	0.07	13.4	5.4	0.16	12.3	5.4	1.6	1	0	0	1	1	1	0	Tup	N-terminal
AAA_13	PF13166.6	gi|298674369|ref|YP_003726119.1|	-	0.077	11.6	4.3	0.7	8.5	3.2	2.0	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|298674369|ref|YP_003726119.1|	-	0.093	12.6	0.0	0.89	9.5	0.0	2.3	1	1	1	2	2	2	0	NACHT	domain
ATPase_2	PF01637.18	gi|298674369|ref|YP_003726119.1|	-	0.093	12.6	1.6	1.5	8.7	0.0	2.5	2	1	1	3	3	3	0	ATPase	domain	predominantly	from	Archaea
CPT	PF07931.12	gi|298674369|ref|YP_003726119.1|	-	0.094	12.6	0.0	0.18	11.6	0.0	1.5	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
Prot_ATP_ID_OB	PF16450.5	gi|298674369|ref|YP_003726119.1|	-	0.094	12.7	2.5	0.12	12.4	0.5	2.2	2	0	0	2	2	2	0	Proteasomal	ATPase	OB	C-terminal	domain
AAA_11	PF13086.6	gi|298674369|ref|YP_003726119.1|	-	0.098	12.4	0.9	1.1	9.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|298674369|ref|YP_003726119.1|	-	0.1	12.1	0.0	0.19	11.2	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
NYD-SP28_assoc	PF14775.6	gi|298674369|ref|YP_003726119.1|	-	0.21	11.7	2.1	1.1	9.5	0.1	2.5	2	0	0	2	2	2	0	Sperm	tail	C-terminal	domain
AAA_23	PF13476.6	gi|298674369|ref|YP_003726119.1|	-	1	9.8	7.5	20	5.6	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
TMF_DNA_bd	PF12329.8	gi|298674369|ref|YP_003726119.1|	-	1.6	8.8	7.8	0.84	9.7	4.8	2.0	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
ABC_tran_CTD	PF16326.5	gi|298674369|ref|YP_003726119.1|	-	2	8.7	5.5	0.7	10.2	2.4	1.8	2	0	0	2	2	1	0	ABC	transporter	C-terminal	domain
Penicillinase_R	PF03965.16	gi|298674370|ref|YP_003726120.1|	-	0.00042	20.6	0.9	0.00066	20.0	0.1	1.7	2	0	0	2	2	2	1	Penicillinase	repressor
TFIIA	PF03153.13	gi|298674370|ref|YP_003726120.1|	-	0.026	14.5	11.5	0.027	14.5	11.5	1.1	1	0	0	1	1	1	0	Transcription	factor	IIA,	alpha/beta	subunit
DUF131	PF01998.17	gi|298674371|ref|YP_003726121.1|	-	7.7e-13	47.9	8.0	7.7e-13	47.9	8.0	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
DUF3273	PF11677.8	gi|298674371|ref|YP_003726121.1|	-	0.033	13.5	5.1	0.037	13.3	5.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3273)
CrgA	PF06781.12	gi|298674371|ref|YP_003726121.1|	-	3.6	7.7	7.7	12	6.0	1.8	2.2	2	0	0	2	2	2	0	Cell	division	protein	CrgA
DUF131	PF01998.17	gi|298674373|ref|YP_003726123.1|	-	5.5e-23	80.4	0.6	5.5e-23	80.4	0.6	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
Ost5	PF05251.12	gi|298674373|ref|YP_003726123.1|	-	0.029	14.6	3.3	5.8	7.3	1.7	2.1	2	0	0	2	2	2	0	Oligosaccharyltransferase	subunit	5
DUF4834	PF16118.5	gi|298674373|ref|YP_003726123.1|	-	0.04	14.9	0.0	0.04	14.9	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4834)
PMP22_Claudin	PF00822.20	gi|298674373|ref|YP_003726123.1|	-	0.043	13.7	2.7	2.4	8.0	0.4	2.1	2	0	0	2	2	2	0	PMP-22/EMP/MP20/Claudin	family
SUR7	PF06687.12	gi|298674373|ref|YP_003726123.1|	-	0.064	12.9	1.1	0.29	10.7	1.1	1.8	1	1	0	1	1	1	0	SUR7/PalI	family
Baculo_11_kDa	PF06143.11	gi|298674373|ref|YP_003726123.1|	-	0.076	12.6	1.1	0.13	11.9	0.1	1.8	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
OAD_gamma	PF04277.13	gi|298674373|ref|YP_003726123.1|	-	0.084	13.5	2.2	1.9	9.2	0.0	2.2	2	0	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
DUF2207	PF09972.9	gi|298674373|ref|YP_003726123.1|	-	0.089	11.5	0.6	0.16	10.7	0.6	1.4	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Sigma_reg_N	PF13800.6	gi|298674373|ref|YP_003726123.1|	-	0.12	12.6	0.1	0.12	12.6	0.1	2.1	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
EphA2_TM	PF14575.6	gi|298674373|ref|YP_003726123.1|	-	0.13	13.2	0.7	0.36	11.7	0.0	1.9	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
SdpI	PF13630.6	gi|298674373|ref|YP_003726123.1|	-	0.44	10.7	10.1	1.2	9.3	0.1	2.2	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
DUF4064	PF13273.6	gi|298674373|ref|YP_003726123.1|	-	0.59	10.4	12.9	15	5.9	6.5	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF4083	PF13314.6	gi|298674373|ref|YP_003726123.1|	-	1.5	8.8	8.0	1.1	9.3	0.4	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4083)
Zip	PF02535.22	gi|298674373|ref|YP_003726123.1|	-	4.3	6.5	6.5	8.4	5.5	0.9	2.1	1	1	1	2	2	2	0	ZIP	Zinc	transporter
UvrB_inter	PF17757.1	gi|298674374|ref|YP_003726124.1|	-	2e-32	111.2	0.7	1.1e-31	108.9	0.1	2.6	3	0	0	3	3	3	1	UvrB	interaction	domain
UvrB	PF12344.8	gi|298674374|ref|YP_003726124.1|	-	9.4e-22	76.6	0.8	2.5e-21	75.3	0.8	1.8	1	0	0	1	1	1	1	Ultra-violet	resistance	protein	B
Helicase_C	PF00271.31	gi|298674374|ref|YP_003726124.1|	-	4.1e-18	65.8	0.1	1.3e-17	64.1	0.1	1.9	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|298674374|ref|YP_003726124.1|	-	1.5e-14	54.3	0.0	2.7e-13	50.3	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
UVR	PF02151.19	gi|298674374|ref|YP_003726124.1|	-	2.8e-10	39.6	4.9	2.8e-10	39.6	4.9	2.4	2	0	0	2	2	2	1	UvrB/uvrC	motif
AAA_30	PF13604.6	gi|298674374|ref|YP_003726124.1|	-	0.0005	19.8	0.0	0.03	14.0	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
Microtub_bd	PF16796.5	gi|298674374|ref|YP_003726124.1|	-	0.00068	19.6	0.0	0.087	12.8	0.0	2.8	2	0	0	2	2	2	1	Microtubule	binding
DEAD	PF00270.29	gi|298674374|ref|YP_003726124.1|	-	0.0016	18.3	0.0	0.013	15.2	0.0	2.5	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
UB2H	PF14814.6	gi|298674374|ref|YP_003726124.1|	-	0.038	14.0	0.0	0.18	11.8	0.0	2.3	1	0	0	1	1	1	0	Bifunctional	transglycosylase	second	domain
Kinesin	PF00225.23	gi|298674374|ref|YP_003726124.1|	-	0.045	12.7	0.0	0.076	11.9	0.0	1.3	1	0	0	1	1	1	0	Kinesin	motor	domain
SWI2_SNF2	PF18766.1	gi|298674374|ref|YP_003726124.1|	-	0.05	13.3	0.1	0.39	10.4	0.0	2.4	2	0	0	2	2	2	0	SWI2/SNF2	ATPase
DUF87	PF01935.17	gi|298674374|ref|YP_003726124.1|	-	0.11	12.6	0.1	0.11	12.6	0.1	2.8	3	0	0	3	3	3	0	Helicase	HerA,	central	domain
AAA_22	PF13401.6	gi|298674374|ref|YP_003726124.1|	-	0.11	12.7	0.5	1	9.6	0.0	2.7	3	0	0	3	3	2	0	AAA	domain
DUF5446	PF17522.2	gi|298674374|ref|YP_003726124.1|	-	2.5	8.4	10.0	0.41	10.8	0.3	3.3	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5446)
Rubrerythrin	PF02915.17	gi|298674375|ref|YP_003726125.1|	-	3.4e-09	37.2	2.0	4.1e-09	36.9	2.0	1.1	1	0	0	1	1	1	1	Rubrerythrin
DUF2383	PF09537.10	gi|298674375|ref|YP_003726125.1|	-	3e-05	24.3	0.6	3e-05	24.3	0.6	1.6	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF2383)
COQ7	PF03232.13	gi|298674375|ref|YP_003726125.1|	-	0.0019	18.0	0.1	0.0029	17.4	0.1	1.2	1	1	0	1	1	1	1	Ubiquinone	biosynthesis	protein	COQ7
Ferritin_2	PF13668.6	gi|298674375|ref|YP_003726125.1|	-	0.0052	17.0	0.1	0.0059	16.8	0.1	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
DUF2202	PF09968.9	gi|298674375|ref|YP_003726125.1|	-	0.017	14.9	0.5	0.023	14.6	0.5	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	domain	(DUF2202)
DUF3231	PF11553.8	gi|298674375|ref|YP_003726125.1|	-	0.052	13.2	0.6	0.057	13.0	0.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3231)
MSL1_dimer	PF16801.5	gi|298674375|ref|YP_003726125.1|	-	1.8	8.4	6.5	2.2	8.1	0.4	2.4	2	0	0	2	2	2	0	Dimerisation	domain	of	Male-specific-Lethal	1
HAD_2	PF13419.6	gi|298674376|ref|YP_003726126.1|	-	5.8e-33	114.5	0.1	8.7e-33	113.9	0.0	1.3	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|298674376|ref|YP_003726126.1|	-	8.5e-16	58.9	0.0	1.2e-15	58.3	0.0	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|298674376|ref|YP_003726126.1|	-	0.00019	21.4	0.0	0.00042	20.3	0.0	1.5	1	0	0	1	1	1	1	HAD-hyrolase-like
NT5C	PF06941.12	gi|298674376|ref|YP_003726126.1|	-	0.045	13.6	0.5	0.18	11.7	0.1	2.1	2	1	0	2	2	2	0	5'	nucleotidase,	deoxy	(Pyrimidine),	cytosolic	type	C	protein	(NT5C)
KH_7	PF17214.3	gi|298674377|ref|YP_003726127.1|	-	1.5e-29	101.7	2.0	2.4e-28	97.9	0.4	2.8	2	0	0	2	2	2	1	KH	domain
Beta-Casp	PF10996.8	gi|298674377|ref|YP_003726127.1|	-	2.3e-25	89.0	0.0	7e-25	87.5	0.0	1.9	2	0	0	2	2	2	1	Beta-Casp	domain
RMMBL	PF07521.12	gi|298674377|ref|YP_003726127.1|	-	1.7e-16	59.8	0.1	5.2e-16	58.3	0.0	1.9	2	0	0	2	2	2	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B_6	PF16661.5	gi|298674377|ref|YP_003726127.1|	-	3.4e-15	56.0	0.0	5.8e-15	55.2	0.0	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|298674377|ref|YP_003726127.1|	-	6.2e-14	52.5	0.4	1.6e-12	47.8	0.5	2.8	2	1	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|298674377|ref|YP_003726127.1|	-	7.9e-10	38.6	0.1	1.6e-09	37.6	0.1	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.17	gi|298674377|ref|YP_003726127.1|	-	1.8e-05	24.5	0.6	0.00013	21.8	0.1	2.7	2	1	0	2	2	2	1	KH	domain
KH_1	PF00013.29	gi|298674377|ref|YP_003726127.1|	-	0.002	17.9	0.6	0.037	13.9	0.3	2.5	2	0	0	2	2	2	1	KH	domain
Lactamase_B_3	PF13483.6	gi|298674377|ref|YP_003726127.1|	-	0.0034	17.3	0.0	0.0081	16.1	0.0	1.6	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
KH_4	PF13083.6	gi|298674377|ref|YP_003726127.1|	-	0.018	14.9	0.0	0.064	13.1	0.0	2.0	1	0	0	1	1	1	0	KH	domain
Proteasome	PF00227.26	gi|298674378|ref|YP_003726128.1|	-	2e-56	190.5	0.3	2.5e-56	190.2	0.3	1.0	1	0	0	1	1	1	1	Proteasome	subunit
HD	PF01966.22	gi|298674379|ref|YP_003726129.1|	-	8.3e-16	58.3	0.4	1.1e-15	57.9	0.4	1.2	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.12	gi|298674379|ref|YP_003726129.1|	-	0.0015	18.0	0.0	0.0092	15.5	0.0	1.9	1	1	1	2	2	2	1	HDOD	domain
TFIIE_alpha	PF02002.17	gi|298674380|ref|YP_003726130.1|	-	2.1e-17	62.9	1.4	3.4e-17	62.2	0.5	1.7	2	0	0	2	2	2	1	TFIIE	alpha	subunit
Rad50_zn_hook	PF04423.14	gi|298674380|ref|YP_003726130.1|	-	0.021	14.7	3.8	0.081	12.8	0.1	2.5	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
RepL	PF05732.11	gi|298674380|ref|YP_003726130.1|	-	0.071	12.5	0.0	0.12	11.8	0.0	1.3	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
TF_Zn_Ribbon	PF08271.12	gi|298674380|ref|YP_003726130.1|	-	0.073	12.6	0.5	0.17	11.4	0.5	1.7	1	0	0	1	1	1	0	TFIIB	zinc-binding
DUF1610	PF07754.11	gi|298674380|ref|YP_003726130.1|	-	0.9	9.6	5.3	0.61	10.1	0.3	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1610)
ATP-grasp_3	PF02655.14	gi|298674381|ref|YP_003726131.1|	-	1.8e-39	135.4	0.0	3.1e-39	134.6	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|298674381|ref|YP_003726131.1|	-	1.2e-08	34.7	0.0	3e-08	33.5	0.0	1.8	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
CPSase_L_D2	PF02786.17	gi|298674381|ref|YP_003726131.1|	-	6.3e-07	29.1	0.0	3.6e-06	26.6	0.0	2.1	1	1	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.13	gi|298674381|ref|YP_003726131.1|	-	5.4e-06	26.1	0.0	1.4e-05	24.7	0.0	1.7	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATPgrasp_ST	PF14397.6	gi|298674381|ref|YP_003726131.1|	-	0.00065	19.0	0.2	0.0028	17.0	0.0	2.1	3	0	0	3	3	3	1	Sugar-transfer	associated	ATP-grasp
RimK	PF08443.11	gi|298674381|ref|YP_003726131.1|	-	0.033	13.8	0.0	0.2	11.2	0.0	2.0	1	1	0	1	1	1	0	RimK-like	ATP-grasp	domain
Catalase_C	PF18011.1	gi|298674381|ref|YP_003726131.1|	-	0.035	13.7	0.0	0.07	12.8	0.0	1.4	1	0	0	1	1	1	0	C-terminal	domain	found	in	long	catalases
N-Term_TEN	PF11474.8	gi|298674381|ref|YP_003726131.1|	-	0.1	12.2	0.9	1.2	8.6	0.1	2.2	2	0	0	2	2	2	0	Telomerase	reverse	transcriptase	TEN	domain
NMD3	PF04981.13	gi|298674382|ref|YP_003726132.1|	-	6.6e-56	189.5	0.9	8.3e-56	189.2	0.9	1.1	1	0	0	1	1	1	1	NMD3	family
zf-NADH-PPase	PF09297.11	gi|298674382|ref|YP_003726132.1|	-	0.026	14.2	2.2	1.5	8.6	0.5	2.6	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_2	PF13240.6	gi|298674382|ref|YP_003726132.1|	-	0.033	13.9	6.4	1.6	8.6	0.1	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
Rpr2	PF04032.16	gi|298674382|ref|YP_003726132.1|	-	0.036	14.4	1.8	0.41	11.0	0.2	2.9	3	1	0	3	3	3	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
NOB1_Zn_bind	PF08772.11	gi|298674382|ref|YP_003726132.1|	-	0.065	13.4	3.2	2.7	8.2	0.2	2.9	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DZR	PF12773.7	gi|298674382|ref|YP_003726132.1|	-	0.88	9.6	7.7	8.2	6.5	6.2	2.8	2	1	0	2	2	2	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.12	gi|298674382|ref|YP_003726132.1|	-	1.6	8.3	8.2	15	5.2	4.4	2.8	2	0	0	2	2	2	0	TFIIB	zinc-binding
DUF362	PF04015.12	gi|298674384|ref|YP_003726134.1|	-	3.1e-41	141.9	0.3	3.7e-41	141.6	0.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF362)
Fer4	PF00037.27	gi|298674384|ref|YP_003726134.1|	-	1.2e-08	34.4	11.5	0.00031	20.4	3.3	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298674384|ref|YP_003726134.1|	-	6.6e-08	32.3	7.7	0.0023	17.9	2.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674384|ref|YP_003726134.1|	-	2e-05	25.0	21.6	0.00012	22.5	8.7	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298674384|ref|YP_003726134.1|	-	2.2e-05	24.5	6.6	4.5e-05	23.5	6.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674384|ref|YP_003726134.1|	-	3.5e-05	24.6	4.7	0.18	12.8	0.1	2.4	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|298674384|ref|YP_003726134.1|	-	5.3e-05	23.1	7.3	0.01	15.9	2.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298674384|ref|YP_003726134.1|	-	0.00016	21.7	10.1	0.00038	20.5	10.1	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674384|ref|YP_003726134.1|	-	0.00028	21.0	6.8	0.00058	20.0	6.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Lar_N	PF09861.9	gi|298674384|ref|YP_003726134.1|	-	0.012	14.7	0.1	0.021	14.0	0.1	1.3	1	0	0	1	1	1	0	Lactate	racemase	N-terminal	domain
Fer4_4	PF12800.7	gi|298674384|ref|YP_003726134.1|	-	0.017	15.6	9.8	1	10.0	0.3	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|298674384|ref|YP_003726134.1|	-	0.085	13.8	11.8	1.5	10.0	0.8	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|298674384|ref|YP_003726134.1|	-	0.26	12.0	8.2	3.1	8.6	0.6	2.7	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|298674384|ref|YP_003726134.1|	-	1.1	9.8	8.7	12	6.5	3.7	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_8	PF13183.6	gi|298674384|ref|YP_003726134.1|	-	1.7	9.1	9.2	91	3.6	9.2	2.4	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298674384|ref|YP_003726134.1|	-	1.8	9.2	8.5	73	4.0	0.4	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298674384|ref|YP_003726134.1|	-	3.6	8.5	9.2	13	6.8	3.2	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
CdhD	PF03599.16	gi|298674385|ref|YP_003726135.1|	-	1.6e-146	488.0	0.0	1.9e-146	487.7	0.0	1.0	1	0	0	1	1	1	1	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
FeS	PF04060.13	gi|298674385|ref|YP_003726135.1|	-	8.2e-13	47.8	0.9	1.4e-12	47.0	0.9	1.4	1	0	0	1	1	1	1	Putative	Fe-S	cluster
DUF5608	PF18356.1	gi|298674385|ref|YP_003726135.1|	-	0.061	13.3	0.5	1.2	9.2	0.1	3.0	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF5608)
CdhD	PF03599.16	gi|298674386|ref|YP_003726136.1|	-	3.9e-86	289.2	1.2	1.6e-78	264.1	0.1	3.1	1	1	2	3	3	3	3	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
His_biosynth	PF00977.21	gi|298674386|ref|YP_003726136.1|	-	0.039	13.4	0.1	0.065	12.7	0.1	1.3	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
CbiA	PF01656.23	gi|298674387|ref|YP_003726137.1|	-	8.3e-18	64.7	0.0	1.1e-17	64.3	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|298674387|ref|YP_003726137.1|	-	7.8e-15	55.2	0.0	1.3e-14	54.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Fer4_NifH	PF00142.18	gi|298674387|ref|YP_003726137.1|	-	5.4e-10	39.2	0.5	7.9e-09	35.3	0.5	2.0	1	1	0	1	1	1	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.15	gi|298674387|ref|YP_003726137.1|	-	5.6e-09	35.6	1.5	3e-08	33.2	1.5	2.3	1	1	0	1	1	1	1	Anion-transporting	ATPase
CBP_BcsQ	PF06564.12	gi|298674387|ref|YP_003726137.1|	-	8.6e-08	31.9	0.0	6.4e-05	22.5	0.0	2.4	2	1	0	2	2	2	2	Cellulose	biosynthesis	protein	BcsQ
ParA	PF10609.9	gi|298674387|ref|YP_003726137.1|	-	1e-07	31.7	0.6	4.6e-07	29.5	0.6	1.9	1	1	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
Toprim	PF01751.22	gi|298674387|ref|YP_003726137.1|	-	0.00014	22.1	0.1	0.0068	16.6	0.0	2.3	2	0	0	2	2	2	1	Toprim	domain
AAA_16	PF13191.6	gi|298674387|ref|YP_003726137.1|	-	0.00021	21.7	0.0	0.00036	20.9	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_24	PF13479.6	gi|298674387|ref|YP_003726137.1|	-	0.0018	18.0	0.9	0.037	13.8	0.9	2.7	1	1	0	1	1	1	1	AAA	domain
SRP54	PF00448.22	gi|298674387|ref|YP_003726137.1|	-	0.002	17.8	1.6	1.4	8.6	0.1	2.2	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
AAA_22	PF13401.6	gi|298674387|ref|YP_003726137.1|	-	0.0082	16.4	0.0	0.029	14.6	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.15	gi|298674387|ref|YP_003726137.1|	-	0.013	15.4	1.7	3.4	7.6	0.2	2.3	2	0	0	2	2	2	0	NTPase
Toprim_4	PF13662.6	gi|298674387|ref|YP_003726137.1|	-	0.016	15.7	0.1	0.09	13.3	0.1	2.1	2	0	0	2	2	2	0	Toprim	domain
AAA_26	PF13500.6	gi|298674387|ref|YP_003726137.1|	-	0.025	14.4	0.9	2.3	8.0	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.6	gi|298674387|ref|YP_003726137.1|	-	0.031	14.8	0.0	0.072	13.6	0.0	1.6	2	0	0	2	2	1	0	AAA	domain
DUF87	PF01935.17	gi|298674387|ref|YP_003726137.1|	-	0.046	13.8	0.2	0.12	12.4	0.1	1.8	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
PIF1	PF05970.14	gi|298674387|ref|YP_003726137.1|	-	0.059	12.5	0.0	0.089	11.9	0.0	1.3	1	0	0	1	1	1	0	PIF1-like	helicase
AAA_7	PF12775.7	gi|298674387|ref|YP_003726137.1|	-	0.069	12.7	0.0	0.16	11.5	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
T2SSE	PF00437.20	gi|298674387|ref|YP_003726137.1|	-	0.07	12.2	0.0	0.14	11.2	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
APS_kinase	PF01583.20	gi|298674387|ref|YP_003726137.1|	-	0.077	12.9	0.1	0.2	11.5	0.0	1.8	2	1	0	2	2	2	0	Adenylylsulphate	kinase
AAA_19	PF13245.6	gi|298674387|ref|YP_003726137.1|	-	0.11	12.8	0.1	0.11	12.8	0.1	2.0	3	1	1	4	4	2	0	AAA	domain
AAA_14	PF13173.6	gi|298674387|ref|YP_003726137.1|	-	0.13	12.3	0.0	0.43	10.6	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
MipZ	PF09140.11	gi|298674387|ref|YP_003726137.1|	-	0.15	11.3	2.0	4.1	6.6	0.2	2.6	2	1	1	3	3	3	0	ATPase	MipZ
PP2C_2	PF13672.6	gi|298674387|ref|YP_003726137.1|	-	0.19	11.3	0.0	0.28	10.8	0.0	1.2	1	0	0	1	1	1	0	Protein	phosphatase	2C
PEPCK_ATP	PF01293.20	gi|298674387|ref|YP_003726137.1|	-	0.2	10.3	0.1	0.32	9.6	0.1	1.2	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxykinase
AAA_25	PF13481.6	gi|298674387|ref|YP_003726137.1|	-	0.28	10.7	1.7	0.4	10.2	0.3	2.2	3	1	0	3	3	3	0	AAA	domain
CdhC	PF03598.15	gi|298674388|ref|YP_003726138.1|	-	2.1e-64	216.1	0.0	3e-64	215.6	0.0	1.2	1	0	0	1	1	1	1	CO	dehydrogenase/acetyl-CoA	synthase	complex	beta	subunit
CO_dh	PF02552.16	gi|298674389|ref|YP_003726139.1|	-	3.5e-33	114.8	0.1	4.2e-33	114.5	0.1	1.0	1	0	0	1	1	1	1	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
TPP_enzyme_M	PF00205.22	gi|298674389|ref|YP_003726139.1|	-	1.3e-05	24.9	0.1	2.4e-05	24.1	0.1	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
Adhesin_P1_N	PF18652.1	gi|298674389|ref|YP_003726139.1|	-	0.11	12.5	0.1	0.23	11.5	0.1	1.5	1	0	0	1	1	1	0	Adhesin	P1	N-terminal	domain
Prismane	PF03063.20	gi|298674390|ref|YP_003726140.1|	-	8.4e-112	374.5	0.3	2.1e-92	310.5	0.0	2.0	1	1	1	2	2	2	2	Prismane/CO	dehydrogenase	family
Fer4	PF00037.27	gi|298674390|ref|YP_003726140.1|	-	2.2e-08	33.6	23.1	4.8e-06	26.2	3.5	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298674390|ref|YP_003726140.1|	-	3.8e-08	33.3	20.6	2e-06	27.8	11.3	3.1	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298674390|ref|YP_003726140.1|	-	6.9e-08	33.0	23.0	1.5e-06	28.6	13.1	3.1	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298674390|ref|YP_003726140.1|	-	1.9e-07	31.4	7.5	0.0015	18.9	0.1	3.1	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674390|ref|YP_003726140.1|	-	2.1e-07	31.0	9.5	2.1e-07	31.0	9.5	2.8	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
CODH_A_N	PF18537.1	gi|298674390|ref|YP_003726140.1|	-	2.5e-06	27.4	0.0	9.9e-06	25.5	0.0	2.1	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	alpha	N-terminal	domain
Fer4_21	PF14697.6	gi|298674390|ref|YP_003726140.1|	-	9.1e-06	25.7	10.7	9.1e-06	25.7	10.7	2.7	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298674390|ref|YP_003726140.1|	-	9.7e-06	26.0	18.1	0.0022	18.5	0.6	3.6	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298674390|ref|YP_003726140.1|	-	5.6e-05	23.0	13.9	0.001	19.1	4.2	3.2	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|298674390|ref|YP_003726140.1|	-	0.0001	22.2	24.1	0.00081	19.3	1.8	3.8	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|298674390|ref|YP_003726140.1|	-	0.00026	21.3	12.8	0.0032	17.9	1.6	3.3	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|298674390|ref|YP_003726140.1|	-	0.00079	19.6	9.0	0.037	14.2	0.7	2.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674390|ref|YP_003726140.1|	-	0.0012	19.8	15.8	0.14	13.1	2.0	3.2	2	1	2	4	4	4	3	4Fe-4S	double	cluster	binding	domain
Fer4_20	PF14691.6	gi|298674390|ref|YP_003726140.1|	-	0.0017	18.1	7.3	0.03	14.1	7.2	2.5	1	1	1	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_3	PF12798.7	gi|298674390|ref|YP_003726140.1|	-	0.0028	18.5	3.6	0.0028	18.5	3.6	3.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
BRCT_3	PF18428.1	gi|298674390|ref|YP_003726140.1|	-	0.02	14.9	0.1	0.049	13.7	0.1	1.6	1	0	0	1	1	1	0	BRCA1	C	Terminus	(BRCT)	domain
Fer4_22	PF17179.4	gi|298674390|ref|YP_003726140.1|	-	0.027	15.3	3.3	0.027	15.3	3.3	2.9	2	1	1	3	3	2	0	4Fe-4S	dicluster	domain
Ribosomal_S2	PF00318.20	gi|298674390|ref|YP_003726140.1|	-	0.066	12.4	0.1	0.14	11.4	0.1	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S2
Fer4_13	PF13370.6	gi|298674390|ref|YP_003726140.1|	-	0.14	12.7	10.4	1.6	9.3	2.5	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Resolvase	PF00239.21	gi|298674391|ref|YP_003726141.1|	-	1.7e-19	70.4	0.1	1.9e-19	70.2	0.1	1.1	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.7	gi|298674391|ref|YP_003726141.1|	-	0.0032	17.6	0.0	0.006	16.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Trp_syntA	PF00290.20	gi|298674391|ref|YP_003726141.1|	-	0.067	12.0	0.0	0.098	11.5	0.0	1.2	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
HTH_7	PF02796.15	gi|298674391|ref|YP_003726141.1|	-	0.082	13.0	0.0	0.18	11.9	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
OrfB_IS605	PF01385.19	gi|298674392|ref|YP_003726142.1|	-	1e-24	87.1	0.1	2.3e-24	85.9	0.1	1.6	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674392|ref|YP_003726142.1|	-	2e-11	43.7	0.0	4.9e-11	42.4	0.0	1.8	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Glyco_hydro_97	PF10566.9	gi|298674392|ref|YP_003726142.1|	-	0.0002	20.8	0.7	0.00032	20.1	0.7	1.3	1	0	0	1	1	1	1	Glycoside	hydrolase	97
Dynamin_N	PF00350.23	gi|298674392|ref|YP_003726142.1|	-	0.023	14.7	0.1	0.059	13.4	0.1	1.6	1	0	0	1	1	1	0	Dynamin	family
ACP_PD	PF04336.12	gi|298674392|ref|YP_003726142.1|	-	0.13	12.6	1.8	0.6	10.6	0.3	2.7	2	2	0	3	3	3	0	Acyl	carrier	protein	phosphodiesterase
DUF3885	PF13021.6	gi|298674392|ref|YP_003726142.1|	-	9.7	6.4	6.4	3.3	7.9	0.1	3.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3885)
Rhomboid	PF01694.22	gi|298674393|ref|YP_003726143.1|	-	8.2e-33	113.5	17.9	8.2e-33	113.5	17.9	1.8	2	0	0	2	2	2	1	Rhomboid	family
zf-AN1	PF01428.16	gi|298674393|ref|YP_003726143.1|	-	1.6e-11	44.1	7.6	2.4e-11	43.6	7.6	1.2	1	0	0	1	1	1	1	AN1-like	Zinc	finger
DUF1751	PF08551.10	gi|298674393|ref|YP_003726143.1|	-	1.2e-06	29.0	2.1	1.2e-06	29.0	2.1	2.7	3	0	0	3	3	3	1	Eukaryotic	integral	membrane	protein	(DUF1751)
Flavi_M	PF01004.19	gi|298674393|ref|YP_003726143.1|	-	0.0072	16.1	0.1	0.022	14.5	0.1	1.8	1	0	0	1	1	1	1	Flavivirus	envelope	glycoprotein	M
ATPase_gene1	PF09527.10	gi|298674393|ref|YP_003726143.1|	-	0.014	15.5	0.3	0.014	15.5	0.3	4.3	4	2	2	6	6	6	0	Putative	F0F1-ATPase	subunit	Ca2+/Mg2+	transporter
FYVE	PF01363.21	gi|298674393|ref|YP_003726143.1|	-	0.026	14.7	1.7	0.039	14.1	1.7	1.3	1	0	0	1	1	1	0	FYVE	zinc	finger
Transp_Tc5_C	PF04236.15	gi|298674393|ref|YP_003726143.1|	-	0.038	14.4	6.0	0.075	13.4	6.0	1.5	1	0	0	1	1	1	0	Tc5	transposase	C-terminal	domain
Antimicrobial_2	PF08023.12	gi|298674393|ref|YP_003726143.1|	-	0.1	13.1	0.6	0.21	12.1	0.6	1.5	1	0	0	1	1	1	0	Frog	antimicrobial	peptide
Pneumo_ncap	PF03246.13	gi|298674393|ref|YP_003726143.1|	-	0.13	11.0	0.0	0.19	10.5	0.0	1.1	1	0	0	1	1	1	0	Pneumovirus	nucleocapsid	protein
C5HCH	PF17982.1	gi|298674393|ref|YP_003726143.1|	-	0.15	12.2	5.5	0.26	11.5	5.5	1.4	1	0	0	1	1	1	0	NSD	Cys-His	rich	domain
MFS_1	PF07690.16	gi|298674393|ref|YP_003726143.1|	-	3	6.7	27.5	1.1	8.1	17.1	2.7	1	1	1	2	2	2	0	Major	Facilitator	Superfamily
Ferritin	PF00210.24	gi|298674394|ref|YP_003726144.1|	-	0.033	14.1	0.0	0.048	13.6	0.0	1.3	1	0	0	1	1	1	0	Ferritin-like	domain
NYN	PF01936.18	gi|298674395|ref|YP_003726145.1|	-	2.4e-22	80.0	0.0	3.1e-22	79.7	0.0	1.1	1	0	0	1	1	1	1	NYN	domain
Chal_sti_synt_C	PF02797.15	gi|298674395|ref|YP_003726145.1|	-	0.046	13.7	0.1	2.7	7.9	0.0	2.1	1	1	1	2	2	2	0	Chalcone	and	stilbene	synthases,	C-terminal	domain
MMR_HSR1_Xtn	PF16897.5	gi|298674395|ref|YP_003726145.1|	-	0.11	12.6	0.1	0.24	11.4	0.0	1.4	1	1	0	1	1	1	0	C-terminal	region	of	MMR_HSR1	domain
HMGL-like	PF00682.19	gi|298674396|ref|YP_003726146.1|	-	1.5e-79	267.2	1.2	2.6e-79	266.5	1.2	1.4	1	0	0	1	1	1	1	HMGL-like
AIRC	PF00731.20	gi|298674397|ref|YP_003726147.1|	-	8.5e-17	61.1	4.9	1.6e-16	60.2	4.9	1.5	1	0	0	1	1	1	1	AIR	carboxylase
NAD_kinase	PF01513.21	gi|298674398|ref|YP_003726148.1|	-	2.1e-55	188.0	0.9	2.6e-55	187.7	0.9	1.2	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.24	gi|298674398|ref|YP_003726148.1|	-	0.0023	17.6	0.0	0.0038	16.8	0.0	1.4	1	0	0	1	1	1	1	Diacylglycerol	kinase	catalytic	domain
PFK	PF00365.20	gi|298674398|ref|YP_003726148.1|	-	0.11	11.8	0.0	0.16	11.3	0.0	1.2	1	0	0	1	1	1	0	Phosphofructokinase
Inositol_P	PF00459.25	gi|298674399|ref|YP_003726149.1|	-	2.7e-30	105.8	0.0	3.4e-30	105.5	0.0	1.1	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.20	gi|298674399|ref|YP_003726149.1|	-	9.4e-05	22.0	0.0	0.00015	21.3	0.0	1.3	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase,	N-terminal	domain
HTH_38	PF13936.6	gi|298674399|ref|YP_003726149.1|	-	0.11	12.2	0.1	0.21	11.4	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Gp_dh_C	PF02800.20	gi|298674400|ref|YP_003726150.1|	-	1.8e-25	89.4	0.0	2.8e-25	88.8	0.0	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.20	gi|298674400|ref|YP_003726150.1|	-	7.2e-13	48.8	0.8	1.4e-12	47.8	0.8	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_N	PF00044.24	gi|298674400|ref|YP_003726150.1|	-	3e-07	30.7	1.0	6.7e-07	29.6	0.2	2.0	2	1	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|298674400|ref|YP_003726150.1|	-	1.1e-05	24.9	0.2	0.011	15.1	0.1	2.3	1	1	1	2	2	2	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.22	gi|298674400|ref|YP_003726150.1|	-	0.0018	19.1	0.1	0.0037	18.1	0.1	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Semialdhyde_dh	PF01118.24	gi|298674400|ref|YP_003726150.1|	-	0.0038	17.6	0.1	0.0077	16.7	0.1	1.5	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|298674400|ref|YP_003726150.1|	-	0.0053	17.0	0.1	0.013	15.7	0.1	1.7	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_3	PF03447.16	gi|298674400|ref|YP_003726150.1|	-	0.023	15.3	0.4	0.18	12.5	0.1	2.4	2	1	0	2	2	2	0	Homoserine	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|298674400|ref|YP_003726150.1|	-	0.034	14.7	0.1	0.087	13.4	0.1	1.7	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
AA_permease_2	PF13520.6	gi|298674401|ref|YP_003726151.1|	-	4.8e-52	177.2	56.1	6.1e-52	176.9	56.1	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.21	gi|298674401|ref|YP_003726151.1|	-	1.4e-42	145.9	48.6	2.1e-42	145.3	48.6	1.2	1	0	0	1	1	1	1	Amino	acid	permease
Usp	PF00582.26	gi|298674401|ref|YP_003726151.1|	-	6.6e-17	62.3	0.4	4.3e-08	33.8	0.0	4.0	3	1	0	3	3	3	2	Universal	stress	protein	family
Spore_permease	PF03845.13	gi|298674401|ref|YP_003726151.1|	-	4.8e-10	38.8	20.5	4.8e-10	38.8	20.5	2.3	2	0	0	2	2	2	1	Spore	germination	protein
ABC_transp_aux	PF09822.9	gi|298674401|ref|YP_003726151.1|	-	0.014	14.9	0.7	0.59	9.5	0.3	2.1	1	1	1	2	2	2	0	ABC-type	uncharacterized	transport	system
NPBW	PF15180.6	gi|298674401|ref|YP_003726151.1|	-	0.27	11.1	0.7	3	7.7	0.0	2.4	2	0	0	2	2	2	0	Neuropeptides	B	and	W
AA_permease_C	PF13906.6	gi|298674401|ref|YP_003726151.1|	-	1.5	9.0	9.9	0.1	12.7	3.2	2.7	2	0	0	2	2	2	0	C-terminus	of	AA_permease
CooT	PF10133.9	gi|298674402|ref|YP_003726152.1|	-	2.1e-21	75.9	1.5	2.3e-21	75.8	1.5	1.0	1	0	0	1	1	1	1	CO	dehydrogenase	accessory	protein	CooT
DUF89	PF01937.19	gi|298674403|ref|YP_003726153.1|	-	6.3e-56	189.8	0.0	7.6e-56	189.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF89
DUF2099	PF09872.9	gi|298674403|ref|YP_003726153.1|	-	0.12	11.5	0.0	0.19	10.9	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2099)
OrfB_IS605	PF01385.19	gi|298674404|ref|YP_003726154.1|	-	6.4e-28	97.4	2.6	1.4e-27	96.2	2.6	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674404|ref|YP_003726154.1|	-	1.7e-23	82.3	0.2	3.6e-23	81.3	0.2	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298674404|ref|YP_003726154.1|	-	4.1e-20	71.0	1.4	9.3e-20	69.8	1.4	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298674404|ref|YP_003726154.1|	-	0.013	15.6	0.3	0.03	14.5	0.3	1.6	1	0	0	1	1	1	0	Piccolo	Zn-finger
LemA	PF04011.12	gi|298674404|ref|YP_003726154.1|	-	0.05	13.5	1.9	0.31	10.9	0.3	2.3	2	0	0	2	2	2	0	LemA	family
Phage_GP20	PF06810.11	gi|298674404|ref|YP_003726154.1|	-	0.11	12.3	7.0	0.42	10.4	4.0	2.3	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
GntP_permease	PF02447.16	gi|298674405|ref|YP_003726155.1|	-	1.6e-64	218.2	27.0	2e-64	218.0	27.0	1.0	1	0	0	1	1	1	1	GntP	family	permease
CitMHS	PF03600.16	gi|298674405|ref|YP_003726155.1|	-	2.8e-08	33.3	26.7	4.3e-08	32.7	26.7	1.3	1	0	0	1	1	1	1	Citrate	transporter
Chordopox_A13L	PF05961.11	gi|298674405|ref|YP_003726155.1|	-	0.011	15.9	0.6	3.2	8.0	0.0	2.7	2	0	0	2	2	2	0	Chordopoxvirus	A13L	protein
AzlD	PF05437.12	gi|298674405|ref|YP_003726155.1|	-	0.16	12.1	0.0	0.16	12.1	0.0	4.7	5	0	0	5	5	5	0	Branched-chain	amino	acid	transport	protein	(AzlD)
BCCT	PF02028.17	gi|298674406|ref|YP_003726156.1|	-	1.3e-194	647.2	48.1	1.4e-194	647.1	48.1	1.0	1	0	0	1	1	1	1	BCCT,	betaine/carnitine/choline	family	transporter
DUF5371	PF17341.2	gi|298674407|ref|YP_003726157.1|	-	1.1e-39	134.5	5.1	1.2e-39	134.3	5.1	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5371)
Pilin_N	PF07790.11	gi|298674408|ref|YP_003726158.1|	-	4e-25	88.5	3.2	4e-25	88.5	3.2	1.6	2	1	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
MtrD	PF04207.12	gi|298674408|ref|YP_003726158.1|	-	0.015	15.0	0.2	0.021	14.5	0.2	1.2	1	0	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	D
SNase	PF00565.17	gi|298674409|ref|YP_003726159.1|	-	1.2e-26	93.3	0.1	1.5e-26	92.9	0.1	1.1	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
Acetyltransf_16	PF05301.11	gi|298674410|ref|YP_003726160.1|	-	0.015	15.1	0.4	0.025	14.4	0.4	1.4	1	0	0	1	1	1	0	GNAT	acetyltransferase,	Mec-17
DUF3939	PF13075.6	gi|298674411|ref|YP_003726161.1|	-	0.017	15.2	0.2	0.019	15.0	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3939)
D5_N	PF08706.11	gi|298674413|ref|YP_003726163.1|	-	1.2e-16	61.4	0.6	2.2e-16	60.5	0.6	1.5	1	0	0	1	1	1	1	D5	N	terminal	like
Pox_D5	PF03288.16	gi|298674413|ref|YP_003726163.1|	-	7e-08	32.9	2.9	1.3e-07	32.0	0.1	2.6	2	1	1	3	3	3	1	Poxvirus	D5	protein-like
RFX_DNA_binding	PF02257.15	gi|298674413|ref|YP_003726163.1|	-	0.00018	22.1	0.0	0.0013	19.3	0.0	2.3	2	0	0	2	2	2	1	RFX	DNA-binding	domain
Adenyl_transf	PF04439.12	gi|298674413|ref|YP_003726163.1|	-	0.11	11.6	3.9	0.52	9.4	1.3	2.4	2	0	0	2	2	2	0	Streptomycin	adenylyltransferase
PAS_9	PF13426.7	gi|298674414|ref|YP_003726164.1|	-	1.1e-42	144.5	10.1	1.1e-12	48.2	0.3	5.0	6	0	0	6	6	5	4	PAS	domain
PAS_4	PF08448.10	gi|298674414|ref|YP_003726164.1|	-	3.6e-41	139.9	0.0	5.6e-21	74.8	0.0	4.5	4	0	0	4	4	4	4	PAS	fold
PAS	PF00989.25	gi|298674414|ref|YP_003726164.1|	-	6.2e-32	109.9	0.0	1.6e-08	34.5	0.0	4.6	4	0	0	4	4	4	4	PAS	fold
HisKA_2	PF07568.12	gi|298674414|ref|YP_003726164.1|	-	2.1e-29	101.4	1.5	2.1e-29	101.4	1.5	2.5	2	0	0	2	2	1	1	Histidine	kinase
PAS_8	PF13188.7	gi|298674414|ref|YP_003726164.1|	-	1.6e-20	72.7	0.0	4.3e-06	26.6	0.2	4.5	4	0	0	4	4	4	4	PAS	domain
PAS_3	PF08447.12	gi|298674414|ref|YP_003726164.1|	-	6.1e-12	45.7	0.4	2.3e-05	24.6	0.0	4.9	5	0	0	5	5	5	2	PAS	fold
HATPase_c	PF02518.26	gi|298674414|ref|YP_003726164.1|	-	1.4e-07	32.0	0.3	3.9e-06	27.3	0.0	3.1	3	1	0	3	3	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HWE_HK	PF07536.14	gi|298674414|ref|YP_003726164.1|	-	6.9e-06	26.7	1.8	7.3e-06	26.6	0.0	2.0	2	0	0	2	2	1	1	HWE	histidine	kinase
sCache_3_3	PF17202.4	gi|298674414|ref|YP_003726164.1|	-	4.2e-05	23.9	1.9	0.023	15.1	0.0	3.7	3	1	0	3	3	3	1	Single	cache	domain	3
Cache_3-Cache_2	PF17201.4	gi|298674414|ref|YP_003726164.1|	-	5.3e-05	22.6	5.2	0.00074	18.9	0.1	3.0	3	0	0	3	3	3	1	Cache	3/Cache	2	fusion	domain
PAS_10	PF13596.6	gi|298674414|ref|YP_003726164.1|	-	8e-05	23.2	0.7	0.26	11.9	0.0	3.9	3	0	0	3	3	3	2	PAS	domain
PAS_7	PF12860.7	gi|298674414|ref|YP_003726164.1|	-	0.00031	20.9	2.1	6.7	6.9	0.2	4.7	4	2	0	4	4	4	2	PAS	fold
sCache_3_2	PF17203.4	gi|298674414|ref|YP_003726164.1|	-	0.00032	20.8	0.1	0.68	10.1	0.0	3.1	3	0	0	3	3	2	2	Single	cache	domain	3
HATPase_c_2	PF13581.6	gi|298674414|ref|YP_003726164.1|	-	0.0011	18.9	0.0	0.0028	17.6	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
PAS_11	PF14598.6	gi|298674414|ref|YP_003726164.1|	-	0.0013	18.8	0.2	1.9	8.7	0.0	2.8	3	0	0	3	3	3	2	PAS	domain
PAS_12	PF18095.1	gi|298674414|ref|YP_003726164.1|	-	0.0066	16.1	0.3	0.58	9.8	0.0	3.3	3	0	0	3	3	3	1	UPF0242	C-terminal	PAS-like	domain
YgaB	PF14182.6	gi|298674414|ref|YP_003726164.1|	-	6.6	7.2	13.2	8.3	6.9	0.7	3.7	3	0	0	3	3	3	0	YgaB-like	protein
TRAM	PF01938.20	gi|298674415|ref|YP_003726165.1|	-	4.4e-14	52.2	0.4	4.7e-14	52.1	0.4	1.0	1	0	0	1	1	1	1	TRAM	domain
LTD	PF00932.19	gi|298674416|ref|YP_003726166.1|	-	3e-22	79.1	4.0	3e-22	79.1	4.0	3.2	2	2	1	3	3	3	1	Lamin	Tail	Domain
Exo_endo_phos	PF03372.23	gi|298674416|ref|YP_003726166.1|	-	5.8e-10	39.1	0.1	8.2e-10	38.6	0.1	1.4	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
BTB	PF00651.31	gi|298674417|ref|YP_003726167.1|	-	0.0061	16.8	0.1	0.0099	16.1	0.1	1.3	1	0	0	1	1	1	1	BTB/POZ	domain
PDDEXK_4	PF14281.6	gi|298674419|ref|YP_003726169.1|	-	9.7e-16	58.4	2.6	1.6e-15	57.7	2.6	1.4	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF4854	PF16146.5	gi|298674419|ref|YP_003726169.1|	-	0.037	14.3	0.0	0.13	12.6	0.0	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4854)
DUF4907	PF16250.5	gi|298674419|ref|YP_003726169.1|	-	0.34	10.8	1.6	5.2	7.0	0.1	2.9	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4907)
TrbC	PF04956.13	gi|298674420|ref|YP_003726170.1|	-	0.012	15.8	1.1	0.67	10.2	0.3	2.2	1	1	1	2	2	2	0	TrbC/VIRB2	family
MIG-14_Wnt-bd	PF06664.12	gi|298674420|ref|YP_003726170.1|	-	0.031	13.5	2.8	1.6	7.9	0.6	2.0	1	1	1	2	2	2	0	Wnt-binding	factor	required	for	Wnt	secretion
BPD_transp_1	PF00528.22	gi|298674420|ref|YP_003726170.1|	-	0.12	12.1	3.9	4.6	6.9	3.8	2.0	1	1	0	1	1	1	0	Binding-protein-dependent	transport	system	inner	membrane	component
ETRAMP	PF09716.10	gi|298674420|ref|YP_003726170.1|	-	0.4	10.8	2.5	0.58	10.3	0.4	2.1	2	0	0	2	2	2	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
DUF2335	PF10097.9	gi|298674421|ref|YP_003726171.1|	-	0.033	14.1	0.9	1.7	8.7	1.0	2.7	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2335)
Fer4_14	PF13394.6	gi|298674422|ref|YP_003726172.1|	-	1.3e-05	25.3	0.0	3.4e-05	24.0	0.0	1.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.21	gi|298674422|ref|YP_003726172.1|	-	2.4e-05	24.7	0.0	8.2e-05	23.0	0.0	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|298674422|ref|YP_003726172.1|	-	4.7e-05	23.7	0.0	9.9e-05	22.6	0.0	1.6	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
FRD2	PF03197.13	gi|298674422|ref|YP_003726172.1|	-	0.13	12.6	0.5	0.52	10.6	0.6	1.9	2	0	0	2	2	2	0	Bacteriophage	FRD2	protein
N6_Mtase	PF02384.16	gi|298674424|ref|YP_003726174.1|	-	4e-63	213.6	1.6	4.2e-63	213.5	0.1	1.5	1	1	0	2	2	2	1	N-6	DNA	Methylase
HsdM_N	PF12161.8	gi|298674424|ref|YP_003726174.1|	-	1.1e-21	77.9	9.8	1.3e-20	74.4	0.4	2.7	2	0	0	2	2	2	2	HsdM	N-terminal	domain
UPF0020	PF01170.18	gi|298674424|ref|YP_003726174.1|	-	0.007	16.1	0.1	0.11	12.2	0.2	2.7	2	1	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
MTS	PF05175.14	gi|298674424|ref|YP_003726174.1|	-	0.014	15.0	0.0	0.034	13.7	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	small	domain
DUF4355	PF14265.6	gi|298674424|ref|YP_003726174.1|	-	0.016	15.4	9.2	0.024	14.9	7.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4355)
AviRa	PF11599.8	gi|298674424|ref|YP_003726174.1|	-	0.038	13.5	0.0	0.08	12.4	0.0	1.5	1	0	0	1	1	1	0	RRNA	methyltransferase	AviRa
CRM1_repeat_2	PF18784.1	gi|298674424|ref|YP_003726174.1|	-	0.074	12.7	0.1	12	5.7	0.0	2.8	2	0	0	2	2	2	0	CRM1	/	Exportin	repeat	2
Methylase_S	PF01420.19	gi|298674425|ref|YP_003726175.1|	-	2e-36	125.8	12.5	5.6e-18	65.7	0.6	2.1	2	0	0	2	2	2	2	Type	I	restriction	modification	DNA	specificity	domain
Spo7_2_N	PF15407.6	gi|298674425|ref|YP_003726175.1|	-	0.14	11.9	0.6	4.7	6.9	0.1	2.5	2	0	0	2	2	2	0	Sporulation	protein	family	7
DSPc	PF00782.20	gi|298674425|ref|YP_003726175.1|	-	0.35	10.7	6.4	2.2	8.1	0.5	2.8	3	0	0	3	3	3	0	Dual	specificity	phosphatase,	catalytic	domain
Osmo_CC	PF08946.10	gi|298674425|ref|YP_003726175.1|	-	3	8.2	9.6	5.2	7.4	1.5	3.3	2	1	0	2	2	2	0	Osmosensory	transporter	coiled	coil
SWI2_SNF2	PF18766.1	gi|298674426|ref|YP_003726176.1|	-	7.9e-26	91.1	1.1	3.1e-25	89.2	1.1	2.0	1	1	0	1	1	1	1	SWI2/SNF2	ATPase
HSDR_N	PF04313.14	gi|298674426|ref|YP_003726176.1|	-	3.8e-17	62.9	5.1	4.7e-17	62.6	2.3	2.5	2	0	0	2	2	2	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
ResIII	PF04851.15	gi|298674426|ref|YP_003726176.1|	-	4.1e-16	59.4	0.1	1.4e-15	57.7	0.1	1.9	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|298674426|ref|YP_003726176.1|	-	5.3e-09	36.1	0.5	2.9e-08	33.7	0.1	2.4	3	1	0	3	3	3	1	DEAD/DEAH	box	helicase
YopX	PF09643.10	gi|298674426|ref|YP_003726176.1|	-	0.037	14.1	0.8	1.4	9.0	0.0	2.8	2	0	0	2	2	2	0	YopX	protein
DUF87	PF01935.17	gi|298674426|ref|YP_003726176.1|	-	0.11	12.6	10.6	0.16	12.0	0.0	4.1	4	1	0	4	4	4	0	Helicase	HerA,	central	domain
DUF3106	PF11304.8	gi|298674426|ref|YP_003726176.1|	-	0.87	10.1	3.8	2.2	8.8	0.2	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3106)
TBP	PF00352.21	gi|298674427|ref|YP_003726177.1|	-	8.1e-34	115.4	0.1	2e-17	62.9	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
Antimicrobial15	PF08110.12	gi|298674427|ref|YP_003726177.1|	-	0.039	14.2	1.0	0.077	13.3	1.0	1.5	1	0	0	1	1	1	0	Ocellatin	family
DUF1048	PF06304.11	gi|298674427|ref|YP_003726177.1|	-	0.044	14.2	0.3	0.085	13.3	0.1	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1048)
PLDc_2	PF13091.6	gi|298674428|ref|YP_003726178.1|	-	3.7e-10	39.8	0.4	5.5e-10	39.2	0.4	1.2	1	0	0	1	1	1	1	PLD-like	domain
Regulator_TrmB	PF11495.8	gi|298674428|ref|YP_003726178.1|	-	0.0012	18.1	0.1	0.002	17.3	0.1	1.3	1	1	0	1	1	1	1	Archaeal	transcriptional	regulator	TrmB
zf-CpG_bind_C	PF12269.8	gi|298674428|ref|YP_003726178.1|	-	0.038	13.8	0.6	0.038	13.8	0.6	3.3	1	1	1	3	3	3	0	CpG	binding	protein	zinc	finger	C	terminal	domain
DZR	PF12773.7	gi|298674428|ref|YP_003726178.1|	-	0.68	10.0	14.6	2.7	8.1	10.4	3.3	2	1	0	2	2	2	0	Double	zinc	ribbon
zf-C3HC4_3	PF13920.6	gi|298674428|ref|YP_003726178.1|	-	8.7	6.3	12.0	15	5.6	6.0	2.9	1	1	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_2	PF13240.6	gi|298674429|ref|YP_003726179.1|	-	0.022	14.5	2.0	0.24	11.1	0.5	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
TPR_17	PF13431.6	gi|298674432|ref|YP_003726182.1|	-	0.05	14.0	0.8	0.68	10.4	0.1	2.5	2	1	0	2	2	2	0	Tetratricopeptide	repeat
TF_Zn_Ribbon	PF08271.12	gi|298674432|ref|YP_003726182.1|	-	0.059	12.9	0.1	0.098	12.2	0.1	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
Phage_integrase	PF00589.22	gi|298674433|ref|YP_003726183.1|	-	3.1e-17	62.9	0.3	1.6e-14	54.1	0.1	2.3	2	0	0	2	2	2	2	Phage	integrase	family
zinc_ribbon_4	PF13717.6	gi|298674433|ref|YP_003726183.1|	-	0.036	14.0	0.3	0.11	12.4	0.1	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
Pilin_N	PF07790.11	gi|298674434|ref|YP_003726184.1|	-	4e-25	88.5	1.9	8.7e-25	87.5	1.9	1.6	1	0	0	1	1	1	1	Archaeal	Type	IV	pilin,	N-terminal
PDDEXK_3	PF13366.6	gi|298674435|ref|YP_003726185.1|	-	7.6e-07	29.5	2.7	8.1e-07	29.4	2.1	1.4	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF3669	PF12417.8	gi|298674435|ref|YP_003726185.1|	-	0.029	14.6	0.0	1.2	9.4	0.0	2.1	2	0	0	2	2	2	0	Zinc	finger	protein
GPDPase_memb	PF10110.9	gi|298674436|ref|YP_003726186.1|	-	8.1e-08	31.4	12.5	3.1e-07	29.5	5.6	2.1	1	1	1	2	2	2	2	Membrane	domain	of	glycerophosphoryl	diester	phosphodiesterase
UPF0259	PF06790.11	gi|298674436|ref|YP_003726186.1|	-	9.2e-06	25.6	10.8	2.9e-05	24.0	4.8	2.4	1	1	2	3	3	3	2	Uncharacterised	protein	family	(UPF0259)
SpecificRecomb	PF10136.9	gi|298674436|ref|YP_003726186.1|	-	0.00023	19.6	2.5	0.00036	19.0	2.5	1.2	1	0	0	1	1	1	1	Site-specific	recombinase
UPF0242	PF06785.11	gi|298674436|ref|YP_003726186.1|	-	0.012	15.7	2.0	0.14	12.2	0.2	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
OppC_N	PF12911.7	gi|298674436|ref|YP_003726186.1|	-	0.039	13.9	0.8	0.039	13.9	0.8	3.2	3	2	0	3	3	3	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DUF5453	PF17534.2	gi|298674436|ref|YP_003726186.1|	-	4.9	7.1	16.2	0.46	10.4	9.5	2.0	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF5453)
DUF2627	PF11118.8	gi|298674436|ref|YP_003726186.1|	-	7.2	7.3	17.1	0.33	11.6	3.7	3.1	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2627)
Pilin_N	PF07790.11	gi|298674437|ref|YP_003726187.1|	-	2e-05	25.4	0.9	0.00059	20.7	0.3	2.7	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
Pilin_N	PF07790.11	gi|298674438|ref|YP_003726188.1|	-	0.036	15.0	4.1	0.2	12.6	4.1	2.3	1	1	0	1	1	1	0	Archaeal	Type	IV	pilin,	N-terminal
Ly49	PF08391.10	gi|298674438|ref|YP_003726188.1|	-	0.047	14.1	0.2	0.11	12.8	0.2	1.8	1	1	0	1	1	1	0	Ly49-like	protein,	N-terminal	region
Pilin_N	PF07790.11	gi|298674439|ref|YP_003726189.1|	-	0.075	14.0	4.0	0.22	12.5	4.0	2.0	1	1	0	1	1	1	0	Archaeal	Type	IV	pilin,	N-terminal
Arch_fla_DE	PF04659.13	gi|298674443|ref|YP_003726193.1|	-	2.3e-28	97.9	0.2	1.9e-27	95.0	0.2	2.7	1	0	0	1	1	1	1	Archaeal	flagella	protein
GAS	PF13851.6	gi|298674443|ref|YP_003726193.1|	-	0.00031	20.2	5.9	0.00031	20.2	5.9	6.3	3	1	4	7	7	6	2	Growth-arrest	specific	micro-tubule	binding
FlaC_arch	PF05377.11	gi|298674443|ref|YP_003726193.1|	-	0.0024	18.2	1.3	0.0024	18.2	1.3	9.1	9	1	2	11	11	9	2	Flagella	accessory	protein	C	(FlaC)
TPR_MLP1_2	PF07926.12	gi|298674443|ref|YP_003726193.1|	-	0.011	15.7	0.2	0.011	15.7	0.2	6.2	6	0	0	6	6	6	0	TPR/MLP1/MLP2-like	protein
Erythro-docking	PF09277.11	gi|298674443|ref|YP_003726193.1|	-	0.089	12.7	0.1	2.1	8.3	0.0	2.7	2	0	0	2	2	2	0	Erythronolide	synthase,	docking
HSBP1	PF06825.12	gi|298674443|ref|YP_003726193.1|	-	0.1	12.5	0.1	0.1	12.5	0.1	6.8	5	1	1	6	6	6	0	Heat	shock	factor	binding	protein	1
ABC_tran_CTD	PF16326.5	gi|298674443|ref|YP_003726193.1|	-	0.14	12.4	20.3	1.7	8.9	0.9	5.9	2	1	2	4	4	4	0	ABC	transporter	C-terminal	domain
DUF1664	PF07889.12	gi|298674443|ref|YP_003726193.1|	-	0.17	11.9	32.5	0.18	11.8	2.0	5.5	3	1	2	5	5	5	0	Protein	of	unknown	function	(DUF1664)
DUF948	PF06103.11	gi|298674443|ref|YP_003726193.1|	-	0.17	12.1	20.2	0.22	11.8	0.3	5.2	3	1	3	6	6	6	0	Bacterial	protein	of	unknown	function	(DUF948)
HisKA_3	PF07730.13	gi|298674443|ref|YP_003726193.1|	-	0.17	12.4	0.7	1.3	9.6	0.0	3.0	3	0	0	3	3	1	0	Histidine	kinase
PilJ	PF13675.6	gi|298674443|ref|YP_003726193.1|	-	0.18	11.8	9.8	14	5.8	0.1	5.3	5	1	1	6	6	6	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
DUF2397	PF09660.10	gi|298674443|ref|YP_003726193.1|	-	0.19	10.6	5.5	0.15	10.9	3.3	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2397)
Baculo_PEP_C	PF04513.12	gi|298674443|ref|YP_003726193.1|	-	0.36	10.9	26.4	0.17	12.0	4.0	5.0	3	1	2	5	5	5	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
BLOC1_2	PF10046.9	gi|298674443|ref|YP_003726193.1|	-	0.42	11.0	42.0	0.043	14.1	7.9	6.4	6	1	2	8	8	7	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF489	PF04356.12	gi|298674443|ref|YP_003726193.1|	-	0.53	10.3	14.3	0.68	9.9	1.4	3.7	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF489)
DASH_Dam1	PF08653.10	gi|298674443|ref|YP_003726193.1|	-	0.92	9.4	15.2	3.3	7.6	0.2	6.1	5	0	0	5	5	5	0	DASH	complex	subunit	Dam1
DUF720	PF05302.11	gi|298674443|ref|YP_003726193.1|	-	5.9	6.8	9.3	0.2	11.5	0.6	3.0	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF720)
ApoO	PF09769.9	gi|298674443|ref|YP_003726193.1|	-	7.3	6.6	7.3	1e+02	2.9	0.2	4.8	4	1	0	4	4	4	0	Apolipoprotein	O
T3SSipB	PF16535.5	gi|298674443|ref|YP_003726193.1|	-	8.2	6.9	27.7	1	9.8	2.1	5.4	3	1	1	4	4	4	0	Type	III	cell	invasion	protein	SipB
NPV_P10	PF05531.12	gi|298674443|ref|YP_003726193.1|	-	9.2	6.8	36.0	1.6	9.2	3.1	7.2	3	1	1	5	5	5	0	Nucleopolyhedrovirus	P10	protein
DAP_epimerase	PF01678.19	gi|298674444|ref|YP_003726194.1|	-	2.8e-54	182.5	0.4	7.7e-30	103.6	0.0	2.0	2	0	0	2	2	2	2	Diaminopimelate	epimerase
Pro_racemase	PF05544.11	gi|298674444|ref|YP_003726194.1|	-	0.019	14.0	0.0	0.034	13.2	0.0	1.3	1	0	0	1	1	1	0	Proline	racemase
Adenosine_kin	PF04008.14	gi|298674444|ref|YP_003726194.1|	-	0.14	11.9	0.0	0.29	10.9	0.0	1.5	1	0	0	1	1	1	0	Adenosine	specific	kinase
Acylphosphatase	PF00708.18	gi|298674445|ref|YP_003726195.1|	-	1.3e-29	102.4	0.1	1.5e-29	102.2	0.1	1.0	1	0	0	1	1	1	1	Acylphosphatase
NdhS	PF11623.8	gi|298674445|ref|YP_003726195.1|	-	0.032	13.9	0.1	0.056	13.1	0.1	1.5	1	0	0	1	1	1	0	NAD(P)H	dehydrogenase	subunit	S
tRNA-Thr_ED	PF08915.11	gi|298674446|ref|YP_003726196.1|	-	3.5e-53	179.3	0.2	6.3e-53	178.5	0.2	1.4	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.20	gi|298674446|ref|YP_003726196.1|	-	3e-19	68.9	0.2	8.5e-19	67.5	0.2	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|298674446|ref|YP_003726196.1|	-	3.8e-19	69.4	0.5	7.1e-19	68.5	0.5	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Retrotran_gag_2	PF14223.6	gi|298674446|ref|YP_003726196.1|	-	0.088	12.5	0.2	0.63	9.7	0.1	2.4	2	0	0	2	2	2	0	gag-polypeptide	of	LTR	copia-type
DUF424	PF04242.13	gi|298674446|ref|YP_003726196.1|	-	0.17	12.2	0.5	18	5.7	0.0	3.7	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF424)
OrfB_Zn_ribbon	PF07282.11	gi|298674447|ref|YP_003726197.1|	-	2.2e-15	56.3	4.6	2.2e-15	56.3	4.6	1.8	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
Rpr2	PF04032.16	gi|298674447|ref|YP_003726197.1|	-	0.65	10.3	10.1	1.8	8.9	6.9	2.9	2	1	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
AI-2E_transport	PF01594.16	gi|298674448|ref|YP_003726198.1|	-	5e-45	154.1	44.5	5.9e-45	153.8	44.5	1.0	1	0	0	1	1	1	1	AI-2E	family	transporter
Saf_2TM	PF18303.1	gi|298674448|ref|YP_003726198.1|	-	0.19	11.3	5.7	0.72	9.4	5.7	2.0	1	0	0	1	1	1	0	SAVED-fused	2TM	effector	domain
tRNA-synt_2d	PF01409.20	gi|298674449|ref|YP_003726199.1|	-	9e-93	310.3	0.0	1.2e-92	309.9	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA_synthFbeta	PF17759.1	gi|298674449|ref|YP_003726199.1|	-	2.1e-08	33.9	0.0	4.4e-05	23.0	0.0	2.2	2	0	0	2	2	2	2	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
tRNA-synt_2	PF00152.20	gi|298674449|ref|YP_003726199.1|	-	0.0011	18.2	0.6	0.082	12.0	0.0	2.9	3	0	0	3	3	3	1	tRNA	synthetases	class	II	(D,	K	and	N)
HTH_45	PF14947.6	gi|298674449|ref|YP_003726199.1|	-	0.049	13.6	0.6	2	8.5	0.2	2.5	2	0	0	2	2	2	0	Winged	helix-turn-helix
DUF4364	PF14277.6	gi|298674449|ref|YP_003726199.1|	-	0.06	13.1	0.4	0.69	9.6	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4364)
TrmB	PF01978.19	gi|298674449|ref|YP_003726199.1|	-	0.13	12.1	1.9	0.76	9.7	0.2	2.4	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
tRNA-synt_1b	PF00579.25	gi|298674450|ref|YP_003726200.1|	-	1.4e-37	129.6	0.0	3.4e-21	75.8	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(W	and	Y)
Radical_SAM	PF04055.21	gi|298674451|ref|YP_003726201.1|	-	8.8e-15	55.5	0.1	1.6e-14	54.7	0.1	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|298674451|ref|YP_003726201.1|	-	1.2e-09	38.5	0.5	2.9e-09	37.3	0.5	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.6	gi|298674451|ref|YP_003726201.1|	-	0.0072	16.6	0.0	0.015	15.6	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|298674451|ref|YP_003726201.1|	-	0.081	13.1	0.7	0.23	11.6	0.7	1.8	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
eIF-5_eIF-2B	PF01873.17	gi|298674452|ref|YP_003726202.1|	-	1.1e-37	128.5	0.0	1.6e-37	127.9	0.0	1.2	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
TRAM	PF01938.20	gi|298674452|ref|YP_003726202.1|	-	2.7e-12	46.5	0.5	6.2e-12	45.3	0.5	1.6	1	0	0	1	1	1	1	TRAM	domain
zf_C2H2_13	PF18508.1	gi|298674452|ref|YP_003726202.1|	-	0.1	12.2	0.1	0.1	12.2	0.1	1.8	2	0	0	2	2	2	0	Zinc	finger	domain
zf-RanBP	PF00641.18	gi|298674452|ref|YP_003726202.1|	-	0.2	11.0	0.0	0.2	11.0	0.0	1.6	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
DUF35_N	PF12172.8	gi|298674452|ref|YP_003726202.1|	-	0.26	11.2	1.2	2	8.4	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Ribosomal_L16	PF00252.18	gi|298674453|ref|YP_003726203.1|	-	1.8e-31	108.9	0.3	2.1e-31	108.7	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
GvpL_GvpF	PF06386.11	gi|298674453|ref|YP_003726203.1|	-	0.0032	17.4	0.0	0.0046	16.9	0.0	1.2	1	0	0	1	1	1	1	Gas	vesicle	synthesis	protein	GvpL/GvpF
DUF1786	PF08735.10	gi|298674454|ref|YP_003726204.1|	-	2.4e-90	302.2	0.0	4.9e-90	301.2	0.0	1.5	2	0	0	2	2	2	1	Putative	pyruvate	format-lyase	activating	enzyme	(DUF1786)
MoCF_biosynth	PF00994.24	gi|298674455|ref|YP_003726205.1|	-	6.4e-35	119.9	0.1	7.4e-35	119.7	0.1	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
CRS1_YhbY	PF01985.21	gi|298674456|ref|YP_003726206.1|	-	5.8e-19	68.0	0.2	6.4e-19	67.9	0.2	1.0	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
DUF915	PF06028.11	gi|298674456|ref|YP_003726206.1|	-	0.053	12.8	0.2	0.067	12.5	0.2	1.0	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
DUF190	PF02641.15	gi|298674457|ref|YP_003726207.1|	-	4.5e-35	119.9	0.2	5.1e-35	119.7	0.2	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1993
DUF3240	PF11582.8	gi|298674457|ref|YP_003726207.1|	-	0.091	12.9	0.0	0.11	12.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3240)
Cas_APE2256	PF09651.10	gi|298674457|ref|YP_003726207.1|	-	0.16	11.9	0.0	0.21	11.5	0.0	1.2	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
MoeA_N	PF03453.17	gi|298674458|ref|YP_003726208.1|	-	7e-42	142.9	0.1	1.1e-41	142.2	0.1	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.24	gi|298674458|ref|YP_003726208.1|	-	4e-25	88.2	0.0	7.1e-25	87.4	0.0	1.4	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.15	gi|298674458|ref|YP_003726208.1|	-	3.5e-16	59.1	3.9	2.4e-15	56.4	0.0	3.6	5	0	0	5	5	5	1	MoeA	C-terminal	region	(domain	IV)
UEV	PF05743.13	gi|298674458|ref|YP_003726208.1|	-	0.065	13.1	0.0	0.14	12.0	0.0	1.5	1	0	0	1	1	1	0	UEV	domain
MutL	PF13941.6	gi|298674458|ref|YP_003726208.1|	-	0.083	11.5	0.0	0.14	10.7	0.0	1.3	1	0	0	1	1	1	0	MutL	protein
ThiS	PF02597.20	gi|298674459|ref|YP_003726209.1|	-	1.8e-19	70.2	0.0	2.1e-19	69.9	0.0	1.1	1	0	0	1	1	1	1	ThiS	family
XPC-binding	PF09280.11	gi|298674459|ref|YP_003726209.1|	-	0.0025	17.5	0.0	0.0059	16.3	0.0	1.6	1	0	0	1	1	1	1	XPC-binding	domain
Flavoprotein	PF02441.19	gi|298674460|ref|YP_003726210.1|	-	2.5e-25	89.1	0.1	3e-25	88.8	0.1	1.1	1	0	0	1	1	1	1	Flavoprotein
FISNA	PF14484.6	gi|298674460|ref|YP_003726210.1|	-	0.17	12.1	0.1	0.53	10.6	0.0	1.7	2	0	0	2	2	2	0	Fish-specific	NACHT	associated	domain
Borrelia_REV	PF03978.13	gi|298674461|ref|YP_003726211.1|	-	0.076	13.0	0.1	0.11	12.5	0.1	1.2	1	0	0	1	1	1	0	Borrelia	burgdorferi	REV	protein
HD	PF01966.22	gi|298674462|ref|YP_003726212.1|	-	7.9e-15	55.2	2.4	1.9e-14	53.9	2.1	1.9	2	0	0	2	2	2	1	HD	domain
DUF2482	PF10655.9	gi|298674462|ref|YP_003726212.1|	-	0.016	15.7	0.1	0.048	14.2	0.1	1.8	1	0	0	1	1	1	0	Hypothetical	protein	of	unknown	function	(DUF2482)
PDEase_I	PF00233.19	gi|298674462|ref|YP_003726212.1|	-	0.062	13.0	0.1	0.14	11.9	0.1	1.5	1	0	0	1	1	1	0	3'5'-cyclic	nucleotide	phosphodiesterase
UPF0052	PF01933.18	gi|298674463|ref|YP_003726213.1|	-	2.2e-45	155.2	0.1	2.5e-45	155.0	0.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0052
CDP-OH_P_transf	PF01066.21	gi|298674464|ref|YP_003726214.1|	-	1.1e-12	48.5	1.8	1.1e-12	48.5	1.8	2.5	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
SKI	PF01202.22	gi|298674465|ref|YP_003726215.1|	-	7.7e-34	117.1	0.2	9.4e-34	116.8	0.2	1.0	1	0	0	1	1	1	1	Shikimate	kinase
Cytidylate_kin2	PF13189.6	gi|298674465|ref|YP_003726215.1|	-	2.6e-07	31.0	0.8	1.1e-06	28.9	0.8	2.0	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
dNK	PF01712.19	gi|298674465|ref|YP_003726215.1|	-	9.6e-07	28.8	1.5	0.014	15.3	0.1	2.2	1	1	0	2	2	2	2	Deoxynucleoside	kinase
AAA_18	PF13238.6	gi|298674465|ref|YP_003726215.1|	-	1.4e-06	28.9	0.2	3.7e-06	27.5	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.18	gi|298674465|ref|YP_003726215.1|	-	1.9e-06	27.8	0.1	3.5e-06	26.9	0.0	1.5	2	0	0	2	2	2	1	Cytidylate	kinase
AAA_17	PF13207.6	gi|298674465|ref|YP_003726215.1|	-	4e-06	27.3	0.3	2.6e-05	24.7	0.3	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|298674465|ref|YP_003726215.1|	-	1.7e-05	25.0	0.0	3.7e-05	23.9	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
CoaE	PF01121.20	gi|298674465|ref|YP_003726215.1|	-	0.0014	18.3	0.0	0.0027	17.4	0.0	1.5	1	0	0	1	1	1	1	Dephospho-CoA	kinase
AAA	PF00004.29	gi|298674465|ref|YP_003726215.1|	-	0.0016	18.9	0.1	0.0082	16.6	0.0	2.0	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|298674465|ref|YP_003726215.1|	-	0.0061	15.8	0.4	0.047	12.9	0.1	2.1	2	0	0	2	2	2	1	NB-ARC	domain
ADK	PF00406.22	gi|298674465|ref|YP_003726215.1|	-	0.0098	16.0	0.2	2.3	8.3	0.1	2.2	2	0	0	2	2	2	1	Adenylate	kinase
ATP_bind_2	PF03668.15	gi|298674465|ref|YP_003726215.1|	-	0.012	14.9	0.3	0.02	14.2	0.3	1.4	1	1	0	1	1	1	0	P-loop	ATPase	protein	family
PHM7_cyt	PF14703.6	gi|298674465|ref|YP_003726215.1|	-	0.017	15.4	1.2	0.035	14.3	0.2	1.8	2	0	0	2	2	2	0	Cytosolic	domain	of	10TM	putative	phosphate	transporter
ABC_tran	PF00005.27	gi|298674465|ref|YP_003726215.1|	-	0.027	15.0	0.9	0.051	14.1	0.9	1.8	1	1	0	1	1	1	0	ABC	transporter
AAA_24	PF13479.6	gi|298674465|ref|YP_003726215.1|	-	0.033	13.9	0.4	0.046	13.4	0.4	1.4	1	1	0	1	1	1	0	AAA	domain
Thymidylate_kin	PF02223.17	gi|298674465|ref|YP_003726215.1|	-	0.039	13.6	0.4	3.2	7.4	0.1	2.1	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_22	PF13401.6	gi|298674465|ref|YP_003726215.1|	-	0.043	14.1	0.0	0.085	13.1	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.6	gi|298674465|ref|YP_003726215.1|	-	0.095	12.9	0.0	0.11	12.7	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|298674465|ref|YP_003726215.1|	-	0.096	13.1	0.0	0.099	13.0	0.0	1.2	1	1	0	1	1	1	0	AAA	ATPase	domain
HHH_2	PF12826.7	gi|298674465|ref|YP_003726215.1|	-	0.13	12.4	0.0	0.29	11.2	0.0	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
Rsd_AlgQ	PF04353.13	gi|298674465|ref|YP_003726215.1|	-	0.93	9.4	5.9	2.3	8.2	0.1	3.0	2	2	1	3	3	3	0	Regulator	of	RNA	polymerase	sigma(70)	subunit,	Rsd/AlgQ
PurS	PF02700.14	gi|298674466|ref|YP_003726216.1|	-	1e-27	96.1	0.0	1.1e-27	96.0	0.0	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
DUF2184	PF09950.9	gi|298674466|ref|YP_003726216.1|	-	0.0006	19.3	0.0	0.00075	19.0	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2184)
MRP-S26	PF14943.6	gi|298674466|ref|YP_003726216.1|	-	0.11	12.4	0.2	0.13	12.2	0.2	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosome	subunit	S26
GATase_5	PF13507.6	gi|298674467|ref|YP_003726217.1|	-	5.3e-47	160.1	0.0	6.2e-47	159.9	0.0	1.1	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.24	gi|298674467|ref|YP_003726217.1|	-	3.2e-10	40.0	0.0	5e-10	39.4	0.0	1.3	1	0	0	1	1	1	1	DJ-1/PfpI	family
GATase_3	PF07685.14	gi|298674467|ref|YP_003726217.1|	-	8.5e-09	35.3	0.0	1.5e-08	34.5	0.0	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|298674467|ref|YP_003726217.1|	-	2.1e-06	27.6	0.0	5.1e-06	26.4	0.0	1.7	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|298674467|ref|YP_003726217.1|	-	0.00019	21.3	0.0	0.0005	20.0	0.0	1.6	2	0	0	2	2	2	1	SNO	glutamine	amidotransferase	family
Peptidase_C26	PF07722.13	gi|298674467|ref|YP_003726217.1|	-	0.005	16.6	0.0	0.0097	15.7	0.0	1.5	1	1	0	1	1	1	1	Peptidase	C26
RNase_HII	PF01351.18	gi|298674468|ref|YP_003726218.1|	-	1e-50	172.3	0.1	1.2e-50	172.1	0.1	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
Ish1	PF10281.9	gi|298674468|ref|YP_003726218.1|	-	0.046	14.0	0.5	14	6.1	0.2	3.1	3	0	0	3	3	3	0	Putative	stress-responsive	nuclear	envelope	protein
Peroxin-22	PF12827.7	gi|298674468|ref|YP_003726218.1|	-	0.085	12.8	1.4	0.93	9.4	0.0	2.3	1	1	1	2	2	2	0	Peroxisomal	biogenesis	protein	family
AsiA	PF09010.10	gi|298674468|ref|YP_003726218.1|	-	0.097	12.8	0.3	0.3	11.2	0.0	1.9	2	0	0	2	2	2	0	Anti-Sigma	Factor	A
eIF3_p135	PF12807.7	gi|298674468|ref|YP_003726218.1|	-	0.15	12.1	0.5	1.9	8.5	0.0	2.0	1	1	1	2	2	2	0	Translation	initiation	factor	eIF3	subunit	135
T2SSF	PF00482.23	gi|298674469|ref|YP_003726219.1|	-	1.5e-35	121.8	0.6	4.7e-18	65.3	0.4	4.3	5	0	0	5	5	5	2	Type	II	secretion	system	(T2SS),	protein	F
DUF2207	PF09972.9	gi|298674469|ref|YP_003726219.1|	-	0.19	10.5	22.1	0.12	11.1	1.3	3.9	1	1	1	3	3	3	0	Predicted	membrane	protein	(DUF2207)
Pex24p	PF06398.11	gi|298674469|ref|YP_003726219.1|	-	0.78	8.7	5.1	8.3	5.3	0.0	2.8	1	1	1	2	2	2	0	Integral	peroxisomal	membrane	peroxin
T2SSE	PF00437.20	gi|298674470|ref|YP_003726220.1|	-	1.4e-49	168.6	0.0	2.2e-49	167.9	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|298674470|ref|YP_003726220.1|	-	0.012	15.3	0.0	0.031	14.0	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
TFIIF_alpha	PF05793.12	gi|298674470|ref|YP_003726220.1|	-	0.069	11.7	27.2	0.12	10.9	27.2	1.4	1	0	0	1	1	1	0	Transcription	initiation	factor	IIF,	alpha	subunit	(TFIIF-alpha)
tRNA_synthFbeta	PF17759.1	gi|298674471|ref|YP_003726221.1|	-	7.5e-41	139.9	0.1	1.5e-40	138.9	0.1	1.5	2	0	0	2	2	2	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
B5	PF03484.15	gi|298674471|ref|YP_003726221.1|	-	1.4e-19	70.1	2.5	3.3e-19	68.9	0.2	2.7	3	0	0	3	3	3	1	tRNA	synthetase	B5	domain
B3_4	PF03483.17	gi|298674471|ref|YP_003726221.1|	-	1.4e-17	63.9	0.0	3e-17	62.8	0.0	1.6	1	0	0	1	1	1	1	B3/4	domain
PhetRS_B1	PF18262.1	gi|298674471|ref|YP_003726221.1|	-	0.00055	20.1	0.1	0.093	13.0	0.0	3.0	2	1	0	2	2	2	1	Phe-tRNA	synthetase	beta	subunit	B1	domain
tRNA-synt_2d	PF01409.20	gi|298674471|ref|YP_003726221.1|	-	0.022	14.2	0.3	0.047	13.2	0.3	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	II	core	domain	(F)
DUF4265	PF14085.6	gi|298674471|ref|YP_003726221.1|	-	0.042	13.8	0.1	6.7	6.7	0.0	3.7	3	2	2	5	5	5	0	Domain	of	unknown	function	(DUF4265)
AAA_lid_2	PF17863.1	gi|298674471|ref|YP_003726221.1|	-	0.11	12.4	0.0	0.97	9.3	0.2	2.3	2	1	0	2	2	2	0	AAA	lid	domain
OrfB_IS605	PF01385.19	gi|298674472|ref|YP_003726222.1|	-	2.8e-26	92.1	0.1	5.4e-26	91.2	0.1	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674472|ref|YP_003726222.1|	-	7.5e-23	80.2	0.8	1.8e-22	79.0	0.8	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298674472|ref|YP_003726222.1|	-	2e-08	33.6	0.0	5.2e-08	32.2	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
zinc_ribbon_2	PF13240.6	gi|298674472|ref|YP_003726222.1|	-	0.0026	17.4	1.0	0.95	9.3	0.2	2.8	2	0	0	2	2	2	2	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|298674472|ref|YP_003726222.1|	-	0.0036	16.8	0.4	1.4	8.5	0.1	2.7	2	0	0	2	2	2	2	TFIIB	zinc-binding
zf-ribbon_3	PF13248.6	gi|298674472|ref|YP_003726222.1|	-	0.0082	15.5	0.6	5.1	6.6	0.2	2.8	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.7	gi|298674472|ref|YP_003726222.1|	-	0.022	14.8	0.7	0.051	13.6	0.7	1.6	1	0	0	1	1	1	0	Double	zinc	ribbon
Zn_Tnp_IS1595	PF12760.7	gi|298674472|ref|YP_003726222.1|	-	0.04	13.9	1.1	0.088	12.8	1.1	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Vps5	PF09325.10	gi|298674472|ref|YP_003726222.1|	-	0.14	11.7	4.2	0.26	10.8	4.2	1.4	1	0	0	1	1	1	0	Vps5	C	terminal	like
Vps36-NZF-N	PF16988.5	gi|298674472|ref|YP_003726222.1|	-	0.14	11.5	0.6	0.53	9.7	0.6	2.0	1	1	0	1	1	1	0	Vacuolar	protein	sorting	36	NZF-N	zinc-finger	domain
zf-NADH-PPase	PF09297.11	gi|298674472|ref|YP_003726222.1|	-	0.24	11.1	2.1	1	9.1	2.1	2.0	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
TauE	PF01925.19	gi|298674473|ref|YP_003726223.1|	-	8.7e-46	156.5	39.0	9.9e-46	156.3	39.0	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
ATP1G1_PLM_MAT8	PF02038.16	gi|298674473|ref|YP_003726223.1|	-	0.16	11.5	0.3	0.16	11.5	0.3	2.6	2	0	0	2	2	2	0	ATP1G1/PLM/MAT8	family
Nitroreductase	PF00881.24	gi|298674474|ref|YP_003726224.1|	-	8.9e-35	120.2	0.0	1e-34	120.0	0.0	1.0	1	0	0	1	1	1	1	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|298674474|ref|YP_003726224.1|	-	3.6e-16	59.4	0.0	3.5e-07	30.0	0.0	3.1	1	1	2	3	3	3	3	Putative	TM	nitroreductase
FAM25	PF15825.5	gi|298674474|ref|YP_003726224.1|	-	0.019	15.3	1.5	1.1	9.7	0.0	2.5	2	1	0	2	2	2	0	FAM25	family
Lipoprotein_17	PF04200.12	gi|298674475|ref|YP_003726225.1|	-	0.11	12.9	0.4	0.26	11.7	0.1	1.7	2	0	0	2	2	2	0	Lipoprotein	associated	domain
FeoA	PF04023.14	gi|298674476|ref|YP_003726226.1|	-	2e-08	34.4	0.0	2.5e-08	34.1	0.0	1.1	1	0	0	1	1	1	1	FeoA	domain
Fe_dep_repr_C	PF02742.15	gi|298674476|ref|YP_003726226.1|	-	4.9e-05	23.3	0.1	8.1e-05	22.6	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
UPF0182	PF03699.13	gi|298674477|ref|YP_003726227.1|	-	3.7e-284	944.6	13.9	4.3e-284	944.4	13.9	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0182)
FliS	PF02561.14	gi|298674477|ref|YP_003726227.1|	-	0.082	13.2	0.1	0.18	12.1	0.1	1.6	1	0	0	1	1	1	0	Flagellar	protein	FliS
Fasciclin	PF02469.22	gi|298674478|ref|YP_003726228.1|	-	7.4e-31	107.0	0.0	8.4e-31	106.8	0.0	1.0	1	0	0	1	1	1	1	Fasciclin	domain
DUF211	PF02680.14	gi|298674478|ref|YP_003726228.1|	-	0.066	13.4	0.6	0.12	12.6	0.6	1.5	1	1	0	1	1	1	0	Uncharacterized	ArCR,	COG1888
Phage_SSB	PF16773.5	gi|298674478|ref|YP_003726228.1|	-	0.073	13.1	0.0	0.098	12.7	0.0	1.2	1	0	0	1	1	1	0	Lactococcus	phage	single-stranded	DNA	binding	protein
DEAD	PF00270.29	gi|298674479|ref|YP_003726229.1|	-	3.2e-33	115.0	0.0	1.1e-32	113.3	0.0	1.9	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.11	gi|298674479|ref|YP_003726229.1|	-	1.8e-32	112.7	0.0	3.3e-32	111.8	0.0	1.4	1	0	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.31	gi|298674479|ref|YP_003726229.1|	-	3.8e-23	82.0	0.3	7.5e-20	71.3	0.0	3.8	4	0	0	4	4	4	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|298674479|ref|YP_003726229.1|	-	1.1e-08	35.2	0.0	2.3e-08	34.2	0.0	1.5	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.23	gi|298674479|ref|YP_003726229.1|	-	0.0024	16.6	0.0	0.015	14.0	0.0	1.9	2	0	0	2	2	2	1	SNF2	family	N-terminal	domain
DUF2551	PF10826.8	gi|298674479|ref|YP_003726229.1|	-	0.0039	17.4	0.1	4	7.7	0.0	2.7	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2551)
AAA_19	PF13245.6	gi|298674479|ref|YP_003726229.1|	-	0.11	12.9	0.0	2.8	8.3	0.0	2.9	2	1	0	2	2	2	0	AAA	domain
Metallophos	PF00149.28	gi|298674480|ref|YP_003726230.1|	-	6.2e-09	36.6	0.9	7.9e-09	36.3	0.9	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|298674480|ref|YP_003726230.1|	-	3.6e-05	24.0	0.0	5.4e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.6	gi|298674480|ref|YP_003726230.1|	-	0.021	14.2	0.0	0.079	12.3	0.0	1.9	1	1	0	1	1	1	0	Metallophosphoesterase,	calcineurin	superfamily
Epimerase_2	PF02350.19	gi|298674480|ref|YP_003726230.1|	-	0.16	10.8	0.0	0.27	10.1	0.0	1.4	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
AMP-binding	PF00501.28	gi|298674481|ref|YP_003726231.1|	-	2.1e-89	300.0	0.0	2.6e-89	299.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|298674481|ref|YP_003726231.1|	-	1.6e-24	86.6	0.1	4.4e-24	85.3	0.1	1.8	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
ACAS_N	PF16177.5	gi|298674481|ref|YP_003726231.1|	-	1.1e-20	73.3	3.3	1.1e-20	73.3	3.3	2.5	2	0	0	2	2	2	1	Acetyl-coenzyme	A	synthetase	N-terminus
DS	PF01916.17	gi|298674482|ref|YP_003726232.1|	-	1.3e-102	343.0	0.1	1.5e-102	342.8	0.1	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
OMPdecase	PF00215.24	gi|298674483|ref|YP_003726233.1|	-	1.5e-42	145.7	0.4	1.8e-42	145.4	0.4	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
PYC_OADA	PF02436.18	gi|298674484|ref|YP_003726234.1|	-	9.2e-56	188.7	1.4	2.1e-55	187.6	0.8	1.9	2	0	0	2	2	2	1	Conserved	carboxylase	domain
HMGL-like	PF00682.19	gi|298674484|ref|YP_003726234.1|	-	2.9e-50	171.3	0.0	4e-50	170.8	0.0	1.2	1	0	0	1	1	1	1	HMGL-like
Biotin_lipoyl	PF00364.22	gi|298674484|ref|YP_003726234.1|	-	7e-20	70.6	3.4	1.8e-19	69.3	1.8	2.2	2	0	0	2	2	2	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.6	gi|298674484|ref|YP_003726234.1|	-	7.8e-08	32.0	0.1	0.0014	18.4	0.0	2.7	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD_3	PF13437.6	gi|298674484|ref|YP_003726234.1|	-	6e-07	30.1	0.2	0.0088	16.7	0.0	2.7	2	0	0	2	2	2	2	HlyD	family	secretion	protein
HlyD_D23	PF16576.5	gi|298674484|ref|YP_003726234.1|	-	0.0004	19.7	0.3	0.37	10.0	0.0	2.4	1	1	1	2	2	2	2	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
GCV_H	PF01597.19	gi|298674484|ref|YP_003726234.1|	-	0.032	14.1	1.2	0.074	13.0	0.4	2.0	2	0	0	2	2	2	0	Glycine	cleavage	H-protein
DUF561	PF04481.12	gi|298674484|ref|YP_003726234.1|	-	0.081	12.1	0.2	1.1	8.3	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF561)
RnfC_N	PF13375.6	gi|298674484|ref|YP_003726234.1|	-	0.23	11.4	3.7	0.72	9.8	1.0	3.0	2	1	2	4	4	4	0	RnfC	Barrel	sandwich	hybrid	domain
YqfD	PF06898.11	gi|298674484|ref|YP_003726234.1|	-	1.2	7.9	3.4	5.4	5.7	0.5	2.7	2	1	1	3	3	3	0	Putative	stage	IV	sporulation	protein	YqfD
CPSase_L_D2	PF02786.17	gi|298674485|ref|YP_003726235.1|	-	1.5e-77	259.9	0.2	2.3e-77	259.3	0.2	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Biotin_carb_N	PF00289.22	gi|298674485|ref|YP_003726235.1|	-	1.9e-48	163.6	0.0	9.8e-48	161.3	0.0	2.3	3	0	0	3	3	1	1	Biotin	carboxylase,	N-terminal	domain
Biotin_carb_C	PF02785.19	gi|298674485|ref|YP_003726235.1|	-	4.7e-44	148.9	0.0	1.2e-43	147.6	0.0	1.8	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
Dala_Dala_lig_C	PF07478.13	gi|298674485|ref|YP_003726235.1|	-	7.8e-14	51.7	1.2	1.5e-13	50.8	0.2	1.9	2	1	0	2	2	2	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.14	gi|298674485|ref|YP_003726235.1|	-	2.1e-07	31.1	0.2	3.9e-07	30.3	0.2	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.22	gi|298674485|ref|YP_003726235.1|	-	2.2e-07	30.6	0.1	4.4e-07	29.6	0.1	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.11	gi|298674485|ref|YP_003726235.1|	-	3e-07	30.2	0.4	2.7e-06	27.1	0.4	2.2	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.6	gi|298674485|ref|YP_003726235.1|	-	0.00021	20.9	0.2	0.00039	20.1	0.2	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.19	gi|298674485|ref|YP_003726235.1|	-	0.00037	20.3	0.1	0.00073	19.4	0.1	1.6	1	1	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATPgrasp_Ter	PF15632.6	gi|298674485|ref|YP_003726235.1|	-	0.0046	16.7	0.0	0.0093	15.7	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Archease	PF01951.16	gi|298674485|ref|YP_003726235.1|	-	0.054	13.7	0.1	0.097	12.9	0.1	1.4	1	0	0	1	1	1	0	Archease	protein	family	(MTH1598/TM1083)
ATP-grasp_5	PF13549.6	gi|298674485|ref|YP_003726235.1|	-	0.12	11.8	0.3	0.23	10.9	0.0	1.6	2	0	0	2	2	2	0	ATP-grasp	domain
BPL_LplA_LipB	PF03099.19	gi|298674486|ref|YP_003726236.1|	-	1.8e-17	63.5	0.0	7.3e-17	61.5	0.0	1.9	2	0	0	2	2	2	1	Biotin/lipoate	A/B	protein	ligase	family
HTH_11	PF08279.12	gi|298674486|ref|YP_003726236.1|	-	3e-17	62.3	0.1	6.2e-17	61.3	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
BPL_LplA_LipB_2	PF16917.5	gi|298674486|ref|YP_003726236.1|	-	6.2e-08	32.4	0.0	1.2e-07	31.5	0.0	1.5	1	1	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
BPL_C	PF02237.17	gi|298674486|ref|YP_003726236.1|	-	1.3e-07	31.4	0.0	2.6e-07	30.4	0.0	1.5	1	0	0	1	1	1	1	Biotin	protein	ligase	C	terminal	domain
HTH_24	PF13412.6	gi|298674486|ref|YP_003726236.1|	-	5.1e-07	29.1	0.0	9.5e-07	28.3	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Put_DNA-bind_N	PF06971.13	gi|298674486|ref|YP_003726236.1|	-	0.0037	17.3	0.1	0.43	10.6	0.0	2.6	1	1	1	2	2	2	1	Putative	DNA-binding	protein	N-terminus
Rrf2	PF02082.20	gi|298674486|ref|YP_003726236.1|	-	0.0053	17.1	0.0	0.01	16.2	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
Fe_dep_repress	PF01325.19	gi|298674486|ref|YP_003726236.1|	-	0.013	15.7	0.0	0.028	14.6	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TrmB	PF01978.19	gi|298674486|ref|YP_003726236.1|	-	0.035	14.0	0.0	0.071	13.0	0.0	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.6	gi|298674486|ref|YP_003726236.1|	-	0.036	14.0	0.0	0.076	13.0	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_39	PF14090.6	gi|298674486|ref|YP_003726236.1|	-	0.063	13.0	0.0	0.15	11.8	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
MarR	PF01047.22	gi|298674486|ref|YP_003726236.1|	-	0.073	13.0	0.0	0.14	12.1	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_10	PF04967.12	gi|298674486|ref|YP_003726236.1|	-	0.094	12.5	0.0	0.2	11.5	0.0	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
S-layer	PF07752.11	gi|298674487|ref|YP_003726237.1|	-	5.3e-13	48.6	0.5	7e-13	48.2	0.5	1.1	1	0	0	1	1	1	1	S-layer	protein
SurA_N_3	PF13624.6	gi|298674487|ref|YP_003726237.1|	-	0.044	13.6	0.0	0.067	13.0	0.0	1.3	1	0	0	1	1	1	0	SurA	N-terminal	domain
DUF3450	PF11932.8	gi|298674488|ref|YP_003726238.1|	-	5.9e-05	22.5	13.9	5.9e-05	22.5	13.9	3.8	1	1	3	4	4	4	1	Protein	of	unknown	function	(DUF3450)
DUF724	PF05266.14	gi|298674488|ref|YP_003726238.1|	-	0.00016	21.6	15.7	0.00016	21.6	15.7	3.7	2	2	2	4	4	4	1	Protein	of	unknown	function	(DUF724)
Seryl_tRNA_N	PF02403.22	gi|298674488|ref|YP_003726238.1|	-	0.00033	20.9	46.7	0.049	13.9	20.0	4.6	1	1	3	4	4	4	2	Seryl-tRNA	synthetase	N-terminal	domain
Laminin_I	PF06008.14	gi|298674488|ref|YP_003726238.1|	-	0.0023	17.7	42.5	0.0057	16.4	14.9	2.2	1	1	1	2	2	2	1	Laminin	Domain	I
DUF3584	PF12128.8	gi|298674488|ref|YP_003726238.1|	-	0.0047	14.5	42.4	0.006	14.2	42.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
Jnk-SapK_ap_N	PF09744.9	gi|298674488|ref|YP_003726238.1|	-	0.0048	17.1	47.9	0.0056	16.9	19.7	3.2	2	1	1	3	3	3	2	JNK_SAPK-associated	protein-1
MscS_porin	PF12795.7	gi|298674488|ref|YP_003726238.1|	-	0.0076	15.8	52.1	0.036	13.6	27.1	3.9	1	1	2	4	4	4	2	Mechanosensitive	ion	channel	porin	domain
CENP-F_leu_zip	PF10473.9	gi|298674488|ref|YP_003726238.1|	-	0.0081	16.2	23.5	0.0081	16.2	23.5	3.1	2	1	1	3	3	3	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF1633	PF07794.11	gi|298674488|ref|YP_003726238.1|	-	0.0087	14.3	1.2	0.0087	14.3	1.2	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1633)
ERM	PF00769.19	gi|298674488|ref|YP_003726238.1|	-	0.0096	15.8	41.6	0.081	12.7	25.8	2.6	1	1	1	2	2	2	1	Ezrin/radixin/moesin	family
ADIP	PF11559.8	gi|298674488|ref|YP_003726238.1|	-	0.011	15.9	4.6	0.011	15.9	4.6	3.9	1	1	2	4	4	4	0	Afadin-	and	alpha	-actinin-Binding
DUF4201	PF13870.6	gi|298674488|ref|YP_003726238.1|	-	0.011	15.5	7.4	0.011	15.5	7.4	3.8	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4201)
BLOC1_2	PF10046.9	gi|298674488|ref|YP_003726238.1|	-	0.013	15.8	1.8	0.013	15.8	1.8	5.3	1	1	3	5	5	5	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Fez1	PF06818.15	gi|298674488|ref|YP_003726238.1|	-	0.019	15.5	41.4	0.49	10.8	20.8	2.6	1	1	2	3	3	3	0	Fez1
DUF1871	PF08958.10	gi|298674488|ref|YP_003726238.1|	-	0.021	15.1	0.1	0.056	13.8	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1871)
Spc7	PF08317.11	gi|298674488|ref|YP_003726238.1|	-	0.03	13.2	50.5	0.28	10.0	15.0	3.1	1	1	2	3	3	3	0	Spc7	kinetochore	protein
Filament	PF00038.21	gi|298674488|ref|YP_003726238.1|	-	0.036	13.6	47.7	0.16	11.6	47.7	2.2	1	1	0	1	1	1	0	Intermediate	filament	protein
IL5	PF02025.15	gi|298674488|ref|YP_003726238.1|	-	0.038	14.3	11.7	0.054	13.8	3.3	2.9	2	2	0	2	2	2	0	Interleukin	5
KASH_CCD	PF14662.6	gi|298674488|ref|YP_003726238.1|	-	0.041	13.7	45.4	0.033	14.0	9.8	2.6	1	1	1	2	2	2	0	Coiled-coil	region	of	CCDC155	or	KASH
PhageMin_Tail	PF10145.9	gi|298674488|ref|YP_003726238.1|	-	0.061	13.2	4.5	0.12	12.3	0.0	2.5	1	1	0	2	2	2	0	Phage-related	minor	tail	protein
DUF5082	PF16888.5	gi|298674488|ref|YP_003726238.1|	-	0.097	13.0	43.8	3.4	7.9	1.4	4.9	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF5082)
HsbA	PF12296.8	gi|298674488|ref|YP_003726238.1|	-	0.15	12.5	4.0	29	5.1	0.0	4.0	3	2	1	4	4	4	0	Hydrophobic	surface	binding	protein	A
YtxH	PF12732.7	gi|298674488|ref|YP_003726238.1|	-	0.16	12.5	27.0	1.5	9.4	7.1	5.3	2	2	2	4	4	4	0	YtxH-like	protein
Laminin_II	PF06009.12	gi|298674488|ref|YP_003726238.1|	-	0.18	11.8	37.1	3.2	7.8	10.6	3.6	1	1	2	3	3	3	0	Laminin	Domain	II
Syntaxin_2	PF14523.6	gi|298674488|ref|YP_003726238.1|	-	0.19	12.1	48.3	0.068	13.5	12.6	4.6	2	2	1	3	3	3	0	Syntaxin-like	protein
TMPIT	PF07851.13	gi|298674488|ref|YP_003726238.1|	-	0.24	10.6	37.8	0.037	13.3	13.1	3.5	1	1	4	5	5	5	0	TMPIT-like	protein
ATG16	PF08614.11	gi|298674488|ref|YP_003726238.1|	-	0.26	11.5	40.8	2.2	8.5	5.1	3.5	1	1	2	3	3	3	0	Autophagy	protein	16	(ATG16)
DUF948	PF06103.11	gi|298674488|ref|YP_003726238.1|	-	0.41	10.9	19.6	3.1	8.1	0.5	4.6	2	2	2	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF948)
ApoO	PF09769.9	gi|298674488|ref|YP_003726238.1|	-	0.52	10.3	11.3	1.4	8.8	0.1	4.1	2	2	0	3	3	3	0	Apolipoprotein	O
DUF4200	PF13863.6	gi|298674488|ref|YP_003726238.1|	-	0.64	10.4	55.2	0.31	11.4	21.1	4.6	2	2	2	4	4	3	0	Domain	of	unknown	function	(DUF4200)
OmpH	PF03938.14	gi|298674488|ref|YP_003726238.1|	-	0.66	10.3	55.0	0.24	11.7	9.4	4.1	1	1	2	4	4	4	0	Outer	membrane	protein	(OmpH-like)
T3SSipB	PF16535.5	gi|298674488|ref|YP_003726238.1|	-	0.67	10.4	31.8	2	8.9	14.4	3.2	1	1	2	3	3	3	0	Type	III	cell	invasion	protein	SipB
DUF745	PF05335.13	gi|298674488|ref|YP_003726238.1|	-	0.77	9.5	25.1	0.78	9.4	4.6	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF745)
FliJ	PF02050.16	gi|298674488|ref|YP_003726238.1|	-	0.85	9.9	37.8	6.1	7.1	6.0	4.7	1	1	3	4	4	3	0	Flagellar	FliJ	protein
HCMV_UL139	PF12507.8	gi|298674488|ref|YP_003726238.1|	-	0.92	9.9	16.2	3.3	8.1	0.4	3.5	2	1	1	3	3	3	0	Human	Cytomegalovirus	UL139	protein
DUF1664	PF07889.12	gi|298674488|ref|YP_003726238.1|	-	1	9.4	32.6	1	9.4	4.1	4.5	1	1	2	4	4	4	0	Protein	of	unknown	function	(DUF1664)
TPR_MLP1_2	PF07926.12	gi|298674488|ref|YP_003726238.1|	-	1.1	9.3	53.0	0.22	11.6	10.5	4.4	2	2	2	4	4	4	0	TPR/MLP1/MLP2-like	protein
bZIP_1	PF00170.21	gi|298674488|ref|YP_003726238.1|	-	1.2	9.3	38.8	1	9.5	0.4	6.4	3	3	2	6	6	6	0	bZIP	transcription	factor
Tropomyosin_1	PF12718.7	gi|298674488|ref|YP_003726238.1|	-	1.3	9.2	56.0	0.55	10.4	7.9	4.3	1	1	3	4	4	4	0	Tropomyosin	like
NPV_P10	PF05531.12	gi|298674488|ref|YP_003726238.1|	-	1.4	9.4	30.3	19	5.8	11.2	5.6	1	1	3	4	4	4	0	Nucleopolyhedrovirus	P10	protein
Bacillus_HBL	PF05791.11	gi|298674488|ref|YP_003726238.1|	-	1.7	8.4	39.6	0.097	12.5	2.2	4.0	2	2	2	4	4	4	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF641	PF04859.12	gi|298674488|ref|YP_003726238.1|	-	2.1	8.7	37.2	2	8.8	4.7	4.5	2	2	2	4	4	4	0	Plant	protein	of	unknown	function	(DUF641)
PilJ	PF13675.6	gi|298674488|ref|YP_003726238.1|	-	2.5	8.2	10.6	0.2	11.7	1.7	3.1	2	2	0	2	2	2	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
HOOK	PF05622.12	gi|298674488|ref|YP_003726238.1|	-	2.6	6.1	53.7	1.4	7.0	27.7	2.0	1	1	1	2	2	2	0	HOOK	protein
DUF4686	PF15742.5	gi|298674488|ref|YP_003726238.1|	-	2.7	7.0	54.5	0.42	9.7	21.3	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4686)
EzrA	PF06160.12	gi|298674488|ref|YP_003726238.1|	-	3.1	5.9	53.1	3.3	5.8	27.8	2.5	1	1	1	2	2	2	0	Septation	ring	formation	regulator,	EzrA
AAA_13	PF13166.6	gi|298674488|ref|YP_003726238.1|	-	3.1	6.3	47.0	4.2	5.9	20.1	2.1	1	1	1	2	2	2	0	AAA	domain
Atg14	PF10186.9	gi|298674488|ref|YP_003726238.1|	-	3.3	6.7	47.9	0.16	11.0	8.5	3.2	1	1	2	3	3	3	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
YabA	PF06156.13	gi|298674488|ref|YP_003726238.1|	-	3.5	8.3	45.2	11	6.7	7.9	5.0	1	1	3	4	4	4	0	Initiation	control	protein	YabA
Fib_alpha	PF08702.10	gi|298674488|ref|YP_003726238.1|	-	3.8	7.7	45.5	0.37	11.0	10.2	4.3	1	1	3	4	4	4	0	Fibrinogen	alpha/beta	chain	family
DUF4407	PF14362.6	gi|298674488|ref|YP_003726238.1|	-	4	6.7	36.3	1.8e+04	-8.3	36.3	2.6	1	1	0	1	1	0	0	Domain	of	unknown	function	(DUF4407)
DUF1192	PF06698.11	gi|298674488|ref|YP_003726238.1|	-	4	7.6	20.7	0.6	10.2	0.2	5.5	6	1	1	7	7	4	0	Protein	of	unknown	function	(DUF1192)
MAD	PF05557.13	gi|298674488|ref|YP_003726238.1|	-	4.2	5.6	50.9	1.2	7.4	31.3	2.1	1	1	1	2	2	2	0	Mitotic	checkpoint	protein
GAS	PF13851.6	gi|298674488|ref|YP_003726238.1|	-	4.9	6.5	57.0	2.7	7.3	38.5	3.4	1	1	2	3	3	3	0	Growth-arrest	specific	micro-tubule	binding
HAUS-augmin3	PF14932.6	gi|298674488|ref|YP_003726238.1|	-	6.4	6.3	42.3	0.28	10.7	4.7	3.1	1	1	2	3	3	3	0	HAUS	augmin-like	complex	subunit	3
Leu_zip	PF15294.6	gi|298674488|ref|YP_003726238.1|	-	6.5	6.2	48.2	17	4.8	35.9	2.4	1	1	1	2	2	2	0	Leucine	zipper
HMMR_N	PF15905.5	gi|298674488|ref|YP_003726238.1|	-	7.2	6.0	52.7	0.38	10.2	18.5	2.6	1	1	2	3	3	2	0	Hyaluronan	mediated	motility	receptor	N-terminal
LPP	PF04728.13	gi|298674488|ref|YP_003726238.1|	-	7.4	7.1	32.3	5.3	7.5	2.4	6.3	4	2	1	5	5	4	0	Lipoprotein	leucine-zipper
TMF_TATA_bd	PF12325.8	gi|298674488|ref|YP_003726238.1|	-	8.2	6.7	39.7	0.19	11.9	0.7	5.1	1	1	3	4	4	3	0	TATA	element	modulatory	factor	1	TATA	binding
FlaC_arch	PF05377.11	gi|298674488|ref|YP_003726238.1|	-	8.2	6.9	27.5	8.5	6.9	0.0	6.1	3	2	1	4	4	3	0	Flagella	accessory	protein	C	(FlaC)
FAM76	PF16046.5	gi|298674488|ref|YP_003726238.1|	-	8.3	5.7	39.7	3.3	7.0	21.9	2.6	1	1	1	2	2	2	0	FAM76	protein
DUF812	PF05667.11	gi|298674488|ref|YP_003726238.1|	-	8.9	5.1	47.2	3.1	6.6	24.7	2.5	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF812)
Spc7	PF08317.11	gi|298674489|ref|YP_003726239.1|	-	0.00084	18.3	24.8	0.03	13.2	17.3	2.0	1	1	1	2	2	2	2	Spc7	kinetochore	protein
Med14	PF08638.11	gi|298674489|ref|YP_003726239.1|	-	0.0016	17.9	2.3	0.0039	16.6	1.7	1.9	1	1	0	1	1	1	1	Mediator	complex	subunit	MED14
Sec34	PF04136.15	gi|298674489|ref|YP_003726239.1|	-	0.0078	16.1	17.7	0.02	14.8	10.5	2.2	1	1	1	2	2	2	1	Sec34-like	family
DUF948	PF06103.11	gi|298674489|ref|YP_003726239.1|	-	0.0087	16.3	9.6	2.7	8.3	4.1	3.6	1	1	3	4	4	4	2	Bacterial	protein	of	unknown	function	(DUF948)
DUF4407	PF14362.6	gi|298674489|ref|YP_003726239.1|	-	0.017	14.5	11.5	0.42	9.9	7.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
End3	PF12761.7	gi|298674489|ref|YP_003726239.1|	-	0.023	14.9	22.4	0.082	13.1	11.9	2.3	1	1	1	2	2	2	0	Actin	cytoskeleton-regulatory	complex	protein	END3
DUF5129	PF17173.4	gi|298674489|ref|YP_003726239.1|	-	0.027	13.6	1.1	0.051	12.7	0.9	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5129)
Phage_GPO	PF05929.11	gi|298674489|ref|YP_003726239.1|	-	0.056	13.1	12.7	0.12	11.9	6.0	2.1	1	1	1	2	2	2	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
Uds1	PF15456.6	gi|298674489|ref|YP_003726239.1|	-	0.092	12.9	18.7	1.2	9.3	10.0	3.1	2	1	1	3	3	3	0	Up-regulated	During	Septation
GAS	PF13851.6	gi|298674489|ref|YP_003726239.1|	-	0.093	12.1	25.3	0.34	10.2	5.4	2.6	1	1	2	3	3	3	0	Growth-arrest	specific	micro-tubule	binding
Spectrin	PF00435.21	gi|298674489|ref|YP_003726239.1|	-	0.11	13.0	16.6	1.2	9.7	3.9	2.7	1	1	2	3	3	3	0	Spectrin	repeat
TPR_MLP1_2	PF07926.12	gi|298674489|ref|YP_003726239.1|	-	0.12	12.5	20.8	2.4	8.2	6.2	3.4	1	1	2	3	3	3	0	TPR/MLP1/MLP2-like	protein
NPV_P10	PF05531.12	gi|298674489|ref|YP_003726239.1|	-	0.15	12.5	12.1	35	4.9	5.8	3.3	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Csm1_N	PF18504.1	gi|298674489|ref|YP_003726239.1|	-	0.15	12.4	0.5	0.15	12.4	0.5	4.8	2	1	3	5	5	5	0	Csm1	N-terminal	domain
CLZ	PF16526.5	gi|298674489|ref|YP_003726239.1|	-	0.16	12.4	0.2	0.16	12.4	0.2	3.8	1	1	1	3	3	3	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
Fib_alpha	PF08702.10	gi|298674489|ref|YP_003726239.1|	-	0.17	12.0	25.3	1.3	9.2	5.6	2.4	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
DHR10	PF18595.1	gi|298674489|ref|YP_003726239.1|	-	0.17	11.9	22.6	0.12	12.5	2.7	3.7	1	1	3	4	4	4	0	Designed	helical	repeat	protein	10	domain
DUF2203	PF09969.9	gi|298674489|ref|YP_003726239.1|	-	0.18	12.5	15.1	0.46	11.2	0.5	3.1	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
SlyX	PF04102.12	gi|298674489|ref|YP_003726239.1|	-	0.18	12.4	11.7	2.9	8.6	0.2	4.2	2	1	2	4	4	4	0	SlyX
Erf4	PF10256.9	gi|298674489|ref|YP_003726239.1|	-	0.23	11.6	8.5	4.8	7.3	0.6	3.5	1	1	1	2	2	2	0	Golgin	subfamily	A	member	7/ERF4	family
DUF1664	PF07889.12	gi|298674489|ref|YP_003726239.1|	-	0.28	11.2	17.6	1.6	8.8	9.0	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
HIP1_clath_bdg	PF16515.5	gi|298674489|ref|YP_003726239.1|	-	0.38	11.4	17.8	2.4	8.8	9.6	2.6	1	1	0	2	2	2	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
DUF4140	PF13600.6	gi|298674489|ref|YP_003726239.1|	-	0.5	10.8	12.8	2.8	8.4	0.7	3.5	1	1	1	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF2785	PF10978.8	gi|298674489|ref|YP_003726239.1|	-	0.5	10.1	3.5	0.4	10.4	0.5	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2785)
SKA2	PF16740.5	gi|298674489|ref|YP_003726239.1|	-	0.51	10.1	11.0	0.66	9.8	5.1	2.8	1	1	0	2	2	2	0	Spindle	and	kinetochore-associated	protein	2
Lipase_GDSL_3	PF14606.6	gi|298674489|ref|YP_003726239.1|	-	0.52	10.4	5.1	2.6	8.2	1.2	2.3	1	1	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase	family
WXG100	PF06013.12	gi|298674489|ref|YP_003726239.1|	-	0.61	10.3	7.2	3.2	8.0	0.7	3.7	3	2	0	3	3	3	0	Proteins	of	100	residues	with	WXG
KxDL	PF10241.9	gi|298674489|ref|YP_003726239.1|	-	0.63	10.4	16.4	0.29	11.5	1.1	4.1	2	1	2	4	4	4	0	Uncharacterized	conserved	protein
Occludin_ELL	PF07303.13	gi|298674489|ref|YP_003726239.1|	-	0.74	10.6	21.5	5.5	7.8	9.4	3.3	1	1	1	3	3	3	0	Occludin	homology	domain
DUF2730	PF10805.8	gi|298674489|ref|YP_003726239.1|	-	0.74	9.9	10.0	12	6.1	2.5	3.3	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2730)
Rho_Binding	PF08912.11	gi|298674489|ref|YP_003726239.1|	-	0.84	10.5	25.4	3.9	8.3	0.6	4.3	1	1	2	3	3	3	0	Rho	Binding
Seryl_tRNA_N	PF02403.22	gi|298674489|ref|YP_003726239.1|	-	0.92	9.8	27.2	5.1	7.4	2.4	3.3	1	1	2	3	3	3	0	Seryl-tRNA	synthetase	N-terminal	domain
Snapin_Pallidin	PF14712.6	gi|298674489|ref|YP_003726239.1|	-	1.1	9.7	19.7	5.1	7.6	2.0	3.5	1	1	3	4	4	4	0	Snapin/Pallidin
FlaC_arch	PF05377.11	gi|298674489|ref|YP_003726239.1|	-	1.2	9.6	24.5	1.5	9.2	0.6	5.2	2	1	3	5	5	5	0	Flagella	accessory	protein	C	(FlaC)
Val_tRNA-synt_C	PF10458.9	gi|298674489|ref|YP_003726239.1|	-	1.4	9.3	12.0	1.9	8.9	0.4	4.1	4	1	2	6	6	5	0	Valyl	tRNA	synthetase	tRNA	binding	arm
TMPIT	PF07851.13	gi|298674489|ref|YP_003726239.1|	-	1.4	8.1	22.6	4.3	6.5	1.8	2.7	1	1	2	3	3	3	0	TMPIT-like	protein
CorA	PF01544.18	gi|298674489|ref|YP_003726239.1|	-	1.9	7.7	13.4	2.5	7.3	11.7	2.0	1	1	1	2	2	2	0	CorA-like	Mg2+	transporter	protein
RPW8	PF05659.11	gi|298674489|ref|YP_003726239.1|	-	2	8.1	14.5	0.72	9.5	1.4	2.9	1	1	0	2	2	2	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
V_ATPase_I	PF01496.19	gi|298674489|ref|YP_003726239.1|	-	2.2	6.1	19.9	0.42	8.5	10.1	2.0	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
Sulfatase_C	PF14707.6	gi|298674489|ref|YP_003726239.1|	-	2.4	8.9	5.9	12	6.6	0.2	3.1	1	1	1	3	3	3	0	C-terminal	region	of	aryl-sulfatase
HalX	PF08663.10	gi|298674489|ref|YP_003726239.1|	-	2.5	8.5	7.4	4.1	7.8	0.2	3.9	2	2	1	3	3	3	0	HalX	domain
DUF745	PF05335.13	gi|298674489|ref|YP_003726239.1|	-	2.7	7.7	11.8	9.4	5.9	4.7	2.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF745)
Glutaredoxin2_C	PF04399.13	gi|298674489|ref|YP_003726239.1|	-	3.4	7.5	8.9	2.2	8.1	0.4	3.3	2	1	2	4	4	4	0	Glutaredoxin	2,	C	terminal	domain
GvpL_GvpF	PF06386.11	gi|298674489|ref|YP_003726239.1|	-	3.5	7.5	7.7	1.7	8.5	5.2	1.7	1	1	1	2	2	2	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
Mst1_SARAH	PF11629.8	gi|298674489|ref|YP_003726239.1|	-	4.3	7.5	8.7	2	8.5	0.2	3.6	3	1	1	4	4	3	0	C	terminal	SARAH	domain	of	Mst1
ALMT	PF11744.8	gi|298674489|ref|YP_003726239.1|	-	5.8	5.6	14.1	7.6	5.2	14.1	1.2	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
DUF4795	PF16043.5	gi|298674489|ref|YP_003726239.1|	-	10	5.7	23.1	21	4.7	23.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
DUF424	PF04242.13	gi|298674490|ref|YP_003726240.1|	-	7.7e-30	103.0	0.4	8.6e-30	102.9	0.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
MCM	PF00493.23	gi|298674491|ref|YP_003726241.1|	-	8.5e-90	299.7	0.0	4.8e-59	199.2	0.0	2.3	2	0	0	2	2	2	2	MCM	P-loop	domain
MCM_OB	PF17207.3	gi|298674491|ref|YP_003726241.1|	-	2e-37	127.8	0.4	4.3e-37	126.8	0.4	1.5	1	0	0	1	1	1	1	MCM	OB	domain
MCM_lid	PF17855.1	gi|298674491|ref|YP_003726241.1|	-	4.1e-25	88.0	0.5	1.2e-24	86.5	0.5	1.9	1	0	0	1	1	1	1	MCM	AAA-lid	domain
MCM_N	PF14551.6	gi|298674491|ref|YP_003726241.1|	-	5.5e-10	39.8	0.3	2.8e-09	37.5	0.3	2.2	1	0	0	1	1	1	1	MCM	N-terminal	domain
LAGLIDADG_3	PF14528.6	gi|298674491|ref|YP_003726241.1|	-	4.6e-08	33.3	0.1	0.0011	19.2	0.0	2.7	2	0	0	2	2	2	2	LAGLIDADG-like	domain
AAA_5	PF07728.14	gi|298674491|ref|YP_003726241.1|	-	0.00033	20.7	0.0	0.00087	19.3	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|298674491|ref|YP_003726241.1|	-	0.044	14.2	0.2	0.18	12.1	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
Zn_ribbon_17	PF17120.5	gi|298674491|ref|YP_003726241.1|	-	0.084	12.5	0.1	0.17	11.5	0.1	1.4	1	0	0	1	1	1	0	Zinc-ribbon,	C4HC2	type
SpoU_methylase	PF00588.19	gi|298674492|ref|YP_003726242.1|	-	9.3e-34	116.6	0.0	1.3e-33	116.2	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.9	gi|298674492|ref|YP_003726242.1|	-	0.001	19.0	0.0	0.01	15.7	0.0	2.1	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
Ldh_1_N	PF00056.23	gi|298674492|ref|YP_003726242.1|	-	0.029	14.5	0.0	0.059	13.5	0.0	1.5	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
Fer4	PF00037.27	gi|298674493|ref|YP_003726243.1|	-	3.3e-11	42.5	14.6	1.2e-05	24.9	4.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298674493|ref|YP_003726243.1|	-	9e-10	38.2	12.2	6.6e-05	22.8	2.0	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674493|ref|YP_003726243.1|	-	1.4e-09	38.4	22.5	1.8e-07	31.6	11.8	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298674493|ref|YP_003726243.1|	-	2.9e-09	36.9	6.1	3.4e-09	36.7	6.1	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674493|ref|YP_003726243.1|	-	6e-09	35.9	21.2	9.8e-08	32.0	9.3	1.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674493|ref|YP_003726243.1|	-	1.1e-08	34.6	12.6	9.6e-06	25.4	1.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298674493|ref|YP_003726243.1|	-	2.6e-07	30.6	11.9	5.4e-07	29.6	11.9	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298674493|ref|YP_003726243.1|	-	1.8e-06	28.6	6.3	1e-05	26.2	0.2	2.0	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.7	gi|298674493|ref|YP_003726243.1|	-	2.3e-06	27.7	15.1	0.0058	17.0	4.3	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|298674493|ref|YP_003726243.1|	-	4.3e-05	24.0	7.0	0.00031	21.2	0.2	2.1	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_8	PF13183.6	gi|298674493|ref|YP_003726243.1|	-	7.4e-05	23.1	11.6	0.00019	21.8	11.6	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674493|ref|YP_003726243.1|	-	9.2e-05	23.3	8.4	0.024	15.6	0.4	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.7	gi|298674493|ref|YP_003726243.1|	-	0.00023	21.9	18.5	0.024	15.5	4.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|298674493|ref|YP_003726243.1|	-	0.0019	19.0	9.2	0.066	14.1	2.2	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298674493|ref|YP_003726243.1|	-	0.0039	17.7	13.5	1.3	9.6	13.6	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
NapB	PF03892.14	gi|298674493|ref|YP_003726243.1|	-	0.057	13.4	0.8	0.074	13.1	0.8	1.2	1	0	0	1	1	1	0	Nitrate	reductase	cytochrome	c-type	subunit	(NapB)
Fer4_18	PF13746.6	gi|298674493|ref|YP_003726243.1|	-	0.66	10.2	9.2	0.3	11.3	0.9	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
NIR_SIR	PF01077.22	gi|298674494|ref|YP_003726244.1|	-	1.4e-29	102.7	0.0	1.9e-29	102.2	0.0	1.2	1	0	0	1	1	1	1	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.17	gi|298674494|ref|YP_003726244.1|	-	1.1e-16	60.4	0.0	1.7e-16	59.8	0.0	1.3	1	0	0	1	1	1	1	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
DUF2059	PF09832.9	gi|298674494|ref|YP_003726244.1|	-	0.026	14.6	0.0	0.064	13.3	0.0	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2059)
S-layer	PF07752.11	gi|298674495|ref|YP_003726245.1|	-	1.6e-202	669.7	38.7	5.7e-102	340.2	14.1	2.6	2	0	0	2	2	2	2	S-layer	protein
CarboxypepD_reg	PF13620.6	gi|298674495|ref|YP_003726245.1|	-	4e-08	33.4	15.0	0.00024	21.3	0.5	4.6	2	1	2	4	4	4	2	Carboxypeptidase	regulatory-like	domain
PEGA	PF08308.11	gi|298674495|ref|YP_003726245.1|	-	1.5e-06	28.0	8.3	0.012	15.5	0.7	4.5	3	1	0	3	3	3	2	PEGA	domain
CarbopepD_reg_2	PF13715.6	gi|298674495|ref|YP_003726245.1|	-	8.6e-06	25.7	10.5	0.054	13.5	0.5	4.6	4	0	0	4	4	4	2	CarboxypepD_reg-like	domain
DUF4198	PF10670.9	gi|298674495|ref|YP_003726245.1|	-	0.00021	21.7	1.9	1.6	9.1	0.1	3.5	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF4198)
DUF4362	PF14275.6	gi|298674495|ref|YP_003726245.1|	-	0.00026	21.2	2.5	0.31	11.3	0.1	2.9	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4362)
Big_3_5	PF16640.5	gi|298674495|ref|YP_003726245.1|	-	0.042	14.0	23.5	0.87	9.8	1.0	4.2	3	0	0	3	3	3	0	Bacterial	Ig-like	domain	(group	3)
PrcB_C	PF14343.6	gi|298674495|ref|YP_003726245.1|	-	0.066	13.3	3.0	25	5.1	0.0	3.8	3	0	0	3	3	3	0	PrcB	C-terminal
A2M_BRD	PF07703.14	gi|298674495|ref|YP_003726245.1|	-	0.081	13.3	0.8	0.56	10.6	0.2	2.5	2	0	0	2	2	2	0	Alpha-2-macroglobulin	bait	region	domain
YtkA	PF13115.6	gi|298674495|ref|YP_003726245.1|	-	0.17	12.5	8.5	12	6.5	0.4	4.5	3	1	0	3	3	3	0	YtkA-like
Y_Y_Y	PF07495.13	gi|298674495|ref|YP_003726245.1|	-	0.3	11.1	7.0	3.1	7.8	0.0	4.5	4	1	1	5	5	5	0	Y_Y_Y	domain
DUF1616	PF07760.11	gi|298674495|ref|YP_003726245.1|	-	0.51	9.7	4.4	0.22	10.9	1.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1616)
Big_4	PF07532.11	gi|298674495|ref|YP_003726245.1|	-	5.2	6.9	9.4	0.66	9.8	0.1	4.1	4	0	0	4	4	3	0	Bacterial	Ig-like	domain	(group	4)
PKD	PF00801.20	gi|298674495|ref|YP_003726245.1|	-	8.7	6.3	11.0	2.5	8.0	0.9	3.9	3	1	0	3	3	3	0	PKD	domain
HAD_2	PF13419.6	gi|298674496|ref|YP_003726246.1|	-	5e-33	114.7	0.2	5.9e-33	114.4	0.2	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|298674496|ref|YP_003726246.1|	-	4.6e-13	50.0	0.1	2.8e-12	47.4	0.1	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|298674496|ref|YP_003726246.1|	-	0.00032	21.2	0.0	0.00057	20.3	0.0	1.4	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|298674496|ref|YP_003726246.1|	-	0.04	14.0	0.0	0.085	12.9	0.0	1.6	1	0	0	1	1	1	0	HAD-hyrolase-like
DUF2179	PF10035.9	gi|298674496|ref|YP_003726246.1|	-	0.05	13.3	0.2	0.12	12.2	0.2	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2179)
DUF72	PF01904.18	gi|298674497|ref|YP_003726247.1|	-	1.3e-62	211.8	0.7	1.5e-62	211.6	0.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
O_anti_polymase	PF01901.16	gi|298674498|ref|YP_003726248.1|	-	0.0044	16.3	17.2	0.011	15.1	17.2	1.6	1	1	0	1	1	1	1	Putative	O-antigen	polymerase
Nitrate_red_gam	PF02665.14	gi|298674498|ref|YP_003726248.1|	-	0.0058	16.2	19.2	0.014	15.0	13.7	2.7	2	1	0	2	2	2	1	Nitrate	reductase	gamma	subunit
CCG	PF02754.16	gi|298674499|ref|YP_003726249.1|	-	6.3e-34	116.1	2.4	8.3e-17	61.2	0.0	2.8	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_8	PF13183.6	gi|298674499|ref|YP_003726249.1|	-	2.6e-11	43.8	2.7	2.6e-11	43.8	2.7	3.0	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298674499|ref|YP_003726249.1|	-	3.4e-08	33.9	3.5	3.4e-08	33.9	3.5	3.1	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674499|ref|YP_003726249.1|	-	1.6e-06	28.9	3.1	1.6e-06	28.9	3.1	2.3	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|298674499|ref|YP_003726249.1|	-	5.8e-06	26.8	18.6	1.3e-05	25.6	8.3	2.9	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298674499|ref|YP_003726249.1|	-	2.5e-05	24.3	9.6	2.5e-05	24.3	9.6	3.8	4	1	0	4	4	3	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674499|ref|YP_003726249.1|	-	3.5e-05	23.9	22.2	7.7e-05	22.8	11.3	3.3	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298674499|ref|YP_003726249.1|	-	4.8e-05	23.5	2.3	0.31	11.2	0.4	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674499|ref|YP_003726249.1|	-	0.0025	17.8	1.8	0.0025	17.8	1.8	3.4	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|298674499|ref|YP_003726249.1|	-	0.0053	17.6	7.3	0.86	10.5	0.4	3.5	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298674499|ref|YP_003726249.1|	-	0.0098	16.0	11.0	0.23	11.6	0.6	3.4	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298674499|ref|YP_003726249.1|	-	0.027	15.4	3.8	0.027	15.4	3.8	3.2	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|298674499|ref|YP_003726249.1|	-	0.033	14.0	1.8	0.033	14.0	1.8	3.5	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298674499|ref|YP_003726249.1|	-	0.6	10.3	21.2	0.11	12.6	1.4	3.4	4	0	0	4	4	3	0	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|298674499|ref|YP_003726249.1|	-	0.82	10.4	9.7	2.1	9.2	0.2	3.5	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.7	gi|298674499|ref|YP_003726249.1|	-	6.2	7.6	23.7	0.18	12.4	2.6	3.7	4	0	0	4	4	4	0	4Fe-4S	binding	domain
UBA_2	PF08587.11	gi|298674500|ref|YP_003726250.1|	-	0.019	15.0	0.0	0.038	14.1	0.0	1.5	1	0	0	1	1	1	0	Ubiquitin	associated	domain	(UBA)
MecA_N	PF05223.11	gi|298674501|ref|YP_003726251.1|	-	0.00072	19.8	0.4	0.00098	19.4	0.4	1.1	1	0	0	1	1	1	1	NTF2-like	N-terminal	transpeptidase	domain
DUF4878	PF12870.7	gi|298674501|ref|YP_003726251.1|	-	0.0031	17.8	0.0	0.0046	17.2	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4878)
Ig_mannosidase	PF17753.1	gi|298674501|ref|YP_003726251.1|	-	0.043	13.6	0.2	0.069	12.9	0.2	1.4	1	1	0	1	1	1	0	Ig-fold	domain
DUF3887	PF13026.6	gi|298674501|ref|YP_003726251.1|	-	0.089	13.6	0.2	0.14	13.0	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3887)
DUF116	PF01976.17	gi|298674502|ref|YP_003726252.1|	-	6.4e-46	155.7	10.0	7.6e-46	155.4	10.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF116
Zip	PF02535.22	gi|298674502|ref|YP_003726252.1|	-	5.6	6.1	5.6	8.4	5.5	5.6	1.1	1	0	0	1	1	1	0	ZIP	Zinc	transporter
DUF116	PF01976.17	gi|298674503|ref|YP_003726253.1|	-	3.1e-42	143.7	0.8	3.8e-42	143.4	0.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF116
Dus	PF01207.17	gi|298674504|ref|YP_003726254.1|	-	7.5e-19	68.0	0.2	1.7e-18	66.8	0.2	1.5	1	1	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
IMPDH	PF00478.25	gi|298674504|ref|YP_003726254.1|	-	1.5e-08	34.1	1.0	2.3e-08	33.5	1.0	1.2	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
His_biosynth	PF00977.21	gi|298674504|ref|YP_003726254.1|	-	7e-08	32.2	0.5	6.2e-07	29.1	0.1	2.1	1	1	1	2	2	2	1	Histidine	biosynthesis	protein
Fer4_14	PF13394.6	gi|298674504|ref|YP_003726254.1|	-	0.0028	17.8	0.0	0.2	11.8	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Oxidored_FMN	PF00724.20	gi|298674504|ref|YP_003726254.1|	-	0.021	14.1	0.1	0.12	11.6	0.0	2.2	2	1	1	3	3	3	0	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
TPP_enzyme_M	PF00205.22	gi|298674504|ref|YP_003726254.1|	-	0.027	14.2	0.2	0.1	12.3	0.0	2.0	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	central	domain
PP_kinase_C_1	PF17941.1	gi|298674504|ref|YP_003726254.1|	-	0.21	11.1	0.7	6.3	6.3	0.1	2.1	1	1	1	2	2	2	0	Polyphosphate	kinase	C-terminal	domain	1
CitG	PF01874.16	gi|298674505|ref|YP_003726255.1|	-	9.2e-76	255.2	0.0	1e-75	255.0	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
ADIP	PF11559.8	gi|298674505|ref|YP_003726255.1|	-	0.0038	17.3	0.1	0.46	10.6	0.1	2.2	2	0	0	2	2	2	2	Afadin-	and	alpha	-actinin-Binding
DUF447	PF04289.12	gi|298674506|ref|YP_003726256.1|	-	8.1e-49	165.8	0.2	9.2e-49	165.6	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
RPM2	PF08579.11	gi|298674506|ref|YP_003726256.1|	-	0.028	14.8	1.9	0.18	12.2	0.3	2.2	1	1	1	2	2	2	0	Mitochondrial	ribonuclease	P	subunit	(RPM2)
PHP_C	PF13263.6	gi|298674507|ref|YP_003726257.1|	-	6.3e-17	61.1	0.0	2e-16	59.5	0.0	1.8	2	0	0	2	2	2	1	PHP-associated
PHP	PF02811.19	gi|298674507|ref|YP_003726257.1|	-	6.3e-11	42.9	0.0	6.8e-11	42.7	0.0	1.2	1	1	0	1	1	1	1	PHP	domain
DbpA	PF03880.15	gi|298674507|ref|YP_003726257.1|	-	0.001	19.0	0.1	0.033	14.2	0.0	2.4	2	0	0	2	2	2	1	DbpA	RNA	binding	domain
TatD_DNase	PF01026.21	gi|298674507|ref|YP_003726257.1|	-	0.042	13.2	0.1	0.06	12.7	0.1	1.3	1	0	0	1	1	1	0	TatD	related	DNase
GTP-bdg_N	PF13167.6	gi|298674508|ref|YP_003726258.1|	-	1e-24	87.0	0.0	2.1e-24	86.0	0.0	1.6	1	0	0	1	1	1	1	GTP-binding	GTPase	N-terminal
MMR_HSR1	PF01926.23	gi|298674508|ref|YP_003726258.1|	-	3.5e-22	78.6	0.1	8.3e-22	77.4	0.1	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP-bdg_M	PF16360.5	gi|298674508|ref|YP_003726258.1|	-	8.3e-17	61.6	2.0	1.8e-16	60.5	2.0	1.6	1	0	0	1	1	1	1	GTP-binding	GTPase	Middle	Region
FeoB_N	PF02421.18	gi|298674508|ref|YP_003726258.1|	-	4.6e-10	39.2	0.8	7.7e-10	38.5	0.1	1.8	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
RsgA_GTPase	PF03193.16	gi|298674508|ref|YP_003726258.1|	-	3.4e-09	36.8	0.4	0.00087	19.2	0.1	2.4	2	0	0	2	2	2	2	RsgA	GTPase
MMR_HSR1_Xtn	PF16897.5	gi|298674508|ref|YP_003726258.1|	-	3.8e-07	30.1	0.1	1e-06	28.7	0.1	1.7	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
GTP_EFTU	PF00009.27	gi|298674508|ref|YP_003726258.1|	-	1.4e-06	28.0	0.0	0.00016	21.3	0.0	2.5	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Gtr1_RagA	PF04670.12	gi|298674508|ref|YP_003726258.1|	-	8.9e-05	21.9	0.7	0.0098	15.3	0.0	2.4	2	0	0	2	2	2	1	Gtr1/RagA	G	protein	conserved	region
Dynamin_N	PF00350.23	gi|298674508|ref|YP_003726258.1|	-	0.0026	17.8	0.8	0.029	14.4	0.0	2.5	2	1	1	3	3	3	1	Dynamin	family
cobW	PF02492.19	gi|298674508|ref|YP_003726258.1|	-	0.0038	16.8	2.6	0.25	10.9	0.4	3.2	2	1	1	3	3	3	1	CobW/HypB/UreG,	nucleotide-binding	domain
MnmE_helical	PF12631.7	gi|298674508|ref|YP_003726258.1|	-	0.0099	16.1	0.0	0.021	15.0	0.0	1.5	1	0	0	1	1	1	1	MnmE	helical	domain
Roc	PF08477.13	gi|298674508|ref|YP_003726258.1|	-	0.068	13.4	0.1	22	5.3	0.0	2.6	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AHH	PF14412.6	gi|298674508|ref|YP_003726258.1|	-	0.077	13.1	0.8	0.18	11.9	0.1	2.0	2	0	0	2	2	2	0	A	nuclease	family	of	the	HNH/ENDO	VII	superfamily	with	conserved	AHH
ABC_tran	PF00005.27	gi|298674508|ref|YP_003726258.1|	-	0.084	13.4	0.1	0.38	11.3	0.0	2.1	1	1	0	2	2	2	0	ABC	transporter
AAA_23	PF13476.6	gi|298674508|ref|YP_003726258.1|	-	0.14	12.7	12.3	5.5	7.4	6.4	2.9	3	0	0	3	3	3	0	AAA	domain
DUF2209	PF09974.9	gi|298674509|ref|YP_003726259.1|	-	2.8e-55	185.8	1.1	3.2e-55	185.6	1.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2209)
Peptidase_Prp	PF04327.12	gi|298674509|ref|YP_003726259.1|	-	0.17	12.1	0.8	0.22	11.8	0.8	1.5	1	1	0	1	1	1	0	Cysteine	protease	Prp
tRNA_int_endo	PF01974.17	gi|298674510|ref|YP_003726260.1|	-	3.9e-48	161.4	0.2	3.7e-26	91.0	0.1	2.4	2	0	0	2	2	2	2	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.14	gi|298674510|ref|YP_003726260.1|	-	4.2e-39	132.1	1.1	7.6e-20	70.3	0.4	2.5	2	0	0	2	2	2	2	tRNA	intron	endonuclease,	N-terminal	domain
Sen15	PF09631.10	gi|298674510|ref|YP_003726260.1|	-	0.0017	18.6	0.0	0.0045	17.3	0.0	1.7	2	0	0	2	2	2	1	Sen15	protein
RnlA_toxin	PF15935.5	gi|298674510|ref|YP_003726260.1|	-	0.049	13.4	0.0	0.1	12.4	0.0	1.5	1	0	0	1	1	1	0	RNase	LS,	bacterial	toxin
GATase_3	PF07685.14	gi|298674511|ref|YP_003726261.1|	-	7.5e-39	133.4	0.8	1.1e-38	132.8	0.8	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
AAA_26	PF13500.6	gi|298674511|ref|YP_003726261.1|	-	1.2e-16	61.1	0.1	5.9e-13	49.1	0.0	3.0	3	0	0	3	3	3	2	AAA	domain
CbiA	PF01656.23	gi|298674511|ref|YP_003726261.1|	-	3.2e-16	59.5	0.0	5.7e-16	58.7	0.0	1.4	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
HTH_11	PF08279.12	gi|298674511|ref|YP_003726261.1|	-	0.16	11.9	0.0	0.69	9.9	0.0	2.1	2	0	0	2	2	2	0	HTH	domain
Fer4_NifH	PF00142.18	gi|298674512|ref|YP_003726262.1|	-	9.2e-92	307.3	1.7	1.1e-91	307.0	1.7	1.0	1	0	0	1	1	1	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ParA	PF10609.9	gi|298674512|ref|YP_003726262.1|	-	4.9e-12	45.8	0.3	1.3e-11	44.5	0.3	1.7	1	1	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|298674512|ref|YP_003726262.1|	-	1.7e-10	41.0	0.0	6.7e-10	39.1	0.0	2.0	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|298674512|ref|YP_003726262.1|	-	6e-08	32.8	0.5	2.3e-07	30.9	0.0	2.1	3	0	0	3	3	3	1	AAA	domain
ArsA_ATPase	PF02374.15	gi|298674512|ref|YP_003726262.1|	-	8.6e-07	28.4	0.8	2.7e-06	26.8	0.2	2.0	2	0	0	2	2	2	1	Anion-transporting	ATPase
MeaB	PF03308.16	gi|298674512|ref|YP_003726262.1|	-	8.1e-05	21.7	0.0	0.00014	21.0	0.0	1.3	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_24	PF13479.6	gi|298674512|ref|YP_003726262.1|	-	0.0001	22.1	0.0	0.00017	21.3	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
MipZ	PF09140.11	gi|298674512|ref|YP_003726262.1|	-	0.0007	19.0	0.2	0.021	14.1	0.0	2.2	2	0	0	2	2	2	1	ATPase	MipZ
SRP54	PF00448.22	gi|298674512|ref|YP_003726262.1|	-	0.003	17.2	0.0	0.0088	15.7	0.0	1.8	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
DAP3	PF10236.9	gi|298674512|ref|YP_003726262.1|	-	0.011	15.0	0.0	0.017	14.3	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_25	PF13481.6	gi|298674512|ref|YP_003726262.1|	-	0.015	14.9	0.2	0.038	13.6	0.0	1.7	3	0	0	3	3	3	0	AAA	domain
AAA_16	PF13191.6	gi|298674512|ref|YP_003726262.1|	-	0.027	14.9	0.1	0.068	13.6	0.0	1.7	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_7	PF12775.7	gi|298674512|ref|YP_003726262.1|	-	0.036	13.6	0.0	0.062	12.8	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_30	PF13604.6	gi|298674512|ref|YP_003726262.1|	-	0.037	13.7	0.0	1.8	8.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.6	gi|298674512|ref|YP_003726262.1|	-	0.079	13.2	0.1	3.4	8.0	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|298674512|ref|YP_003726262.1|	-	0.088	12.5	0.3	0.22	11.2	0.1	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
ATP_bind_1	PF03029.17	gi|298674512|ref|YP_003726262.1|	-	0.095	12.5	0.2	4.8	6.9	0.1	2.5	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
DUF1611	PF07755.11	gi|298674512|ref|YP_003726262.1|	-	0.12	11.7	0.5	0.95	8.7	0.0	2.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
Oxidored_nitro	PF00148.19	gi|298674513|ref|YP_003726263.1|	-	9.7e-17	60.8	0.0	1.3e-16	60.3	0.0	1.3	1	1	0	1	1	1	1	Nitrogenase	component	1	type	Oxidoreductase
SHOCT	PF09851.9	gi|298674513|ref|YP_003726263.1|	-	0.016	14.9	0.3	0.032	14.0	0.3	1.5	1	0	0	1	1	1	0	Short	C-terminal	domain
GvpG	PF05120.12	gi|298674513|ref|YP_003726263.1|	-	0.045	13.8	0.0	0.078	13.0	0.0	1.3	1	0	0	1	1	1	0	Gas	vesicle	protein	G
Mur_ligase_M	PF08245.12	gi|298674514|ref|YP_003726264.1|	-	0.00013	22.0	0.1	0.00059	19.9	0.1	2.1	1	1	0	1	1	1	1	Mur	ligase	middle	domain
HEM4	PF02602.15	gi|298674514|ref|YP_003726264.1|	-	0.0046	16.3	0.0	0.027	13.8	0.0	2.1	2	0	0	2	2	2	1	Uroporphyrinogen-III	synthase	HemD
CbiX	PF01903.17	gi|298674515|ref|YP_003726265.1|	-	1.4e-28	99.3	0.0	1.6e-28	99.1	0.0	1.0	1	0	0	1	1	1	1	CbiX
CbiK	PF06180.11	gi|298674515|ref|YP_003726265.1|	-	1.1e-06	28.2	0.0	1.1e-06	28.2	0.0	1.0	1	0	0	1	1	1	1	Cobalt	chelatase	(CbiK)
Ferrochelatase	PF00762.19	gi|298674515|ref|YP_003726265.1|	-	0.0034	16.5	0.0	0.0042	16.2	0.0	1.1	1	0	0	1	1	1	1	Ferrochelatase
DUF1380	PF07128.12	gi|298674515|ref|YP_003726265.1|	-	0.17	12.1	0.0	0.24	11.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1380)
Glycos_transf_1	PF00534.20	gi|298674516|ref|YP_003726266.1|	-	7.8e-32	110.2	0.0	1.5e-31	109.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|298674516|ref|YP_003726266.1|	-	7.9e-27	94.3	1.3	1.3e-26	93.6	1.3	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_4	PF13692.6	gi|298674516|ref|YP_003726266.1|	-	4.4e-25	88.7	0.0	1.2e-24	87.2	0.0	1.8	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|298674516|ref|YP_003726266.1|	-	2.4e-18	67.1	0.0	3.4e-18	66.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_transf_5	PF08323.11	gi|298674516|ref|YP_003726266.1|	-	3.9e-17	62.8	0.9	2.4e-14	53.6	0.9	2.3	1	1	0	1	1	1	1	Starch	synthase	catalytic	domain
Glyco_trans_4_2	PF13477.6	gi|298674516|ref|YP_003726266.1|	-	9.3e-10	38.7	0.0	1.8e-09	37.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_1_2	PF13524.6	gi|298674516|ref|YP_003726266.1|	-	0.0082	16.5	0.0	0.017	15.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
PDZ_3	PF17815.1	gi|298674516|ref|YP_003726266.1|	-	0.073	12.9	0.0	0.17	11.8	0.0	1.5	1	0	0	1	1	1	0	PDZ	domain
Marek_SORF3	PF07153.11	gi|298674516|ref|YP_003726266.1|	-	0.089	12.1	0.0	0.14	11.5	0.0	1.3	1	0	0	1	1	1	0	Marek's	disease-like	virus	SORF3	protein
DUF2150	PF09920.9	gi|298674517|ref|YP_003726267.1|	-	2e-73	246.4	12.5	2.3e-73	246.2	12.5	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2150)
UPF0179	PF03684.13	gi|298674518|ref|YP_003726268.1|	-	2.3e-51	173.3	5.2	2.6e-51	173.2	5.2	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0179)
DDE_Tnp_1_6	PF13751.6	gi|298674518|ref|YP_003726268.1|	-	0.23	11.7	2.4	0.5	10.6	0.2	2.0	2	0	0	2	2	2	0	Transposase	DDE	domain
Fe-ADH_2	PF13685.6	gi|298674519|ref|YP_003726269.1|	-	6.7e-73	245.5	4.5	8.8e-73	245.1	4.5	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.19	gi|298674519|ref|YP_003726269.1|	-	3.5e-23	82.0	3.5	1.1e-22	80.4	3.5	1.7	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.20	gi|298674519|ref|YP_003726269.1|	-	4.1e-07	29.4	0.2	1.6e-06	27.5	0.2	1.9	1	1	0	1	1	1	1	3-dehydroquinate	synthase
DUF63	PF01889.17	gi|298674520|ref|YP_003726270.1|	-	6.6e-106	354.5	26.0	7.4e-106	354.3	26.0	1.0	1	0	0	1	1	1	1	Membrane	protein	of	unknown	function	DUF63
SpoIIM	PF01944.17	gi|298674521|ref|YP_003726271.1|	-	5.8e-35	120.6	20.2	7.3e-35	120.3	20.2	1.1	1	0	0	1	1	1	1	Stage	II	sporulation	protein	M
JmjN	PF02375.17	gi|298674521|ref|YP_003726271.1|	-	0.028	14.4	0.1	0.11	12.5	0.1	2.0	1	0	0	1	1	1	0	jmjN	domain
ATG27	PF09451.10	gi|298674521|ref|YP_003726271.1|	-	0.16	11.8	1.0	0.22	11.3	0.2	1.6	2	0	0	2	2	2	0	Autophagy-related	protein	27
DUF1297	PF06973.12	gi|298674522|ref|YP_003726272.1|	-	6.3e-78	260.6	0.0	8.5e-78	260.2	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.12	gi|298674522|ref|YP_003726272.1|	-	2.1e-42	143.9	0.0	3.6e-42	143.2	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
TnpW	PF14202.6	gi|298674522|ref|YP_003726272.1|	-	0.11	12.4	0.0	1.6	8.6	0.0	2.3	2	0	0	2	2	2	0	Transposon-encoded	protein	TnpW
eIF2_C	PF09173.11	gi|298674523|ref|YP_003726273.1|	-	1.2e-31	108.8	0.1	3.1e-31	107.5	0.1	1.8	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU	PF00009.27	gi|298674523|ref|YP_003726273.1|	-	1.2e-31	109.8	1.6	8.4e-31	107.0	1.6	2.0	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D2	PF03144.25	gi|298674523|ref|YP_003726273.1|	-	5.1e-07	30.0	0.3	1.7e-06	28.3	0.3	1.9	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|298674523|ref|YP_003726273.1|	-	3.1e-05	24.0	0.0	0.0001	22.3	0.0	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
RsgA_GTPase	PF03193.16	gi|298674523|ref|YP_003726273.1|	-	7e-05	22.8	1.0	0.00093	19.1	0.2	2.2	2	0	0	2	2	2	1	RsgA	GTPase
MMR_HSR1_Xtn	PF16897.5	gi|298674523|ref|YP_003726273.1|	-	0.0019	18.2	0.2	0.0036	17.3	0.2	1.5	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
PduV-EutP	PF10662.9	gi|298674523|ref|YP_003726273.1|	-	0.0042	16.8	2.9	1.9	8.2	0.0	2.9	3	0	0	3	3	3	2	Ethanolamine	utilisation	-	propanediol	utilisation
Nop10p	PF04135.12	gi|298674523|ref|YP_003726273.1|	-	0.051	13.6	2.6	0.1	12.7	2.6	1.4	1	0	0	1	1	1	0	Nucleolar	RNA-binding	protein,	Nop10p	family
PolC_DP2	PF03833.13	gi|298674523|ref|YP_003726273.1|	-	0.079	10.8	0.2	0.11	10.4	0.2	1.1	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
FeoB_N	PF02421.18	gi|298674523|ref|YP_003726273.1|	-	0.097	12.2	1.3	13	5.3	0.0	2.8	2	1	0	2	2	2	0	Ferrous	iron	transport	protein	B
PIN_9	PF18477.1	gi|298674524|ref|YP_003726274.1|	-	1.4e-46	157.6	1.0	1.5e-46	157.4	1.0	1.0	1	0	0	1	1	1	1	PIN	like	domain
PIN_4	PF13638.6	gi|298674524|ref|YP_003726274.1|	-	0.0003	21.1	0.9	0.0006	20.1	0.9	1.6	1	1	0	1	1	1	1	PIN	domain
PIN_10	PF18478.1	gi|298674524|ref|YP_003726274.1|	-	0.015	15.5	0.0	0.032	14.4	0.0	1.6	2	0	0	2	2	2	0	PIN	like	domain
DUF5615	PF18480.1	gi|298674524|ref|YP_003726274.1|	-	0.031	14.0	0.4	0.12	12.1	0.3	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF5615)
PIN_5	PF08745.11	gi|298674524|ref|YP_003726274.1|	-	0.038	13.4	0.2	2.9	7.3	0.2	2.1	1	1	1	2	2	2	0	PINc	domain	ribonuclease
DUF188	PF02639.14	gi|298674524|ref|YP_003726274.1|	-	0.038	13.6	0.4	0.059	13.0	0.3	1.3	1	1	0	1	1	1	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
RNase_Zc3h12a	PF11977.8	gi|298674524|ref|YP_003726274.1|	-	0.096	12.5	0.2	0.11	12.3	0.2	1.3	1	1	0	1	1	1	0	Zc3h12a-like	Ribonuclease	NYN	domain
SHS2_Rpb7-N	PF03876.17	gi|298674525|ref|YP_003726275.1|	-	1.4e-18	67.1	0.0	2.2e-18	66.4	0.0	1.4	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.23	gi|298674525|ref|YP_003726275.1|	-	8.2e-11	42.1	0.4	2.8e-10	40.4	0.0	1.9	2	0	0	2	2	2	1	S1	RNA	binding	domain
RNA_pol_Rbc25	PF08292.12	gi|298674525|ref|YP_003726275.1|	-	0.14	12.4	0.1	0.33	11.2	0.1	1.7	1	1	0	1	1	1	0	RNA	polymerase	III	subunit	Rpc25
Spt4	PF06093.13	gi|298674526|ref|YP_003726276.1|	-	5.2e-14	52.1	0.2	6.2e-14	51.8	0.2	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
Nop10p	PF04135.12	gi|298674526|ref|YP_003726276.1|	-	0.00085	19.3	0.2	0.0015	18.5	0.2	1.4	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-RRN7	PF11781.8	gi|298674526|ref|YP_003726276.1|	-	0.0052	16.4	2.9	0.17	11.6	0.1	2.1	2	0	0	2	2	2	1	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
RecR	PF02132.15	gi|298674526|ref|YP_003726276.1|	-	0.016	14.8	3.0	0.023	14.3	3.0	1.2	1	0	0	1	1	1	0	RecR	protein
zf-ribbon_3	PF13248.6	gi|298674526|ref|YP_003726276.1|	-	0.016	14.6	2.3	0.03	13.7	0.3	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1272	PF06906.11	gi|298674526|ref|YP_003726276.1|	-	0.021	14.9	1.4	0.029	14.5	1.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
TackOD1	PF18551.1	gi|298674526|ref|YP_003726276.1|	-	0.035	13.8	1.9	0.044	13.5	1.9	1.1	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
TF_Zn_Ribbon	PF08271.12	gi|298674526|ref|YP_003726276.1|	-	0.036	13.6	3.2	0.15	11.6	0.3	2.5	2	1	1	3	3	3	0	TFIIB	zinc-binding
Prok-RING_4	PF14447.6	gi|298674526|ref|YP_003726276.1|	-	0.039	13.8	1.8	0.059	13.2	1.8	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	4
PolC_DP2	PF03833.13	gi|298674526|ref|YP_003726276.1|	-	0.12	10.3	0.1	0.094	10.6	0.1	1.1	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
NRDD	PF13597.6	gi|298674526|ref|YP_003726276.1|	-	0.15	10.8	1.1	0.18	10.5	1.1	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
Zn-ribbon_8	PF09723.10	gi|298674526|ref|YP_003726276.1|	-	0.35	11.0	3.7	5.3	7.3	3.7	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674526|ref|YP_003726276.1|	-	1.8	8.6	5.4	1.2	9.2	0.2	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Prim_Zn_Ribbon	PF08273.12	gi|298674526|ref|YP_003726276.1|	-	6.9	7.0	6.4	2.7	8.3	0.8	2.1	1	1	1	2	2	2	0	Zinc-binding	domain	of	primase-helicase
DUF359	PF04019.12	gi|298674527|ref|YP_003726277.1|	-	2.4e-42	143.5	0.2	3.4e-42	143.0	0.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
Astro_capsid_p2	PF16580.5	gi|298674527|ref|YP_003726277.1|	-	0.094	12.1	0.0	0.64	9.4	0.0	1.9	2	0	0	2	2	2	0	C-terminal	tail	of	astrovirus	capsid	projection	or	spike
Ribosomal_S24e	PF01282.19	gi|298674528|ref|YP_003726278.1|	-	3.4e-26	91.0	0.0	4.1e-26	90.7	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S24e
DUF1510	PF07423.11	gi|298674528|ref|YP_003726278.1|	-	0.081	13.1	0.0	0.083	13.1	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1510)
Ribosomal_S27	PF01599.19	gi|298674529|ref|YP_003726279.1|	-	3.1e-22	78.5	3.7	3.5e-22	78.3	3.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S27a
Ribosomal_L37e	PF01907.19	gi|298674529|ref|YP_003726279.1|	-	1.2e-05	25.3	0.8	1.5e-05	25.0	0.8	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L37e
zf-NADH-PPase	PF09297.11	gi|298674529|ref|YP_003726279.1|	-	0.00068	19.2	8.8	0.0053	16.4	8.8	2.0	1	1	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
Nudix_N_2	PF14803.6	gi|298674529|ref|YP_003726279.1|	-	0.0014	18.5	6.7	0.017	15.0	4.3	2.6	1	1	1	2	2	2	2	Nudix	N-terminal
zinc_ribbon_2	PF13240.6	gi|298674529|ref|YP_003726279.1|	-	0.0033	17.1	2.7	0.15	11.9	0.1	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
GFA	PF04828.14	gi|298674529|ref|YP_003726279.1|	-	0.0046	17.3	1.0	0.019	15.3	0.2	1.9	1	1	1	2	2	2	1	Glutathione-dependent	formaldehyde-activating	enzyme
MqsA_antitoxin	PF15731.5	gi|298674529|ref|YP_003726279.1|	-	0.0068	16.5	0.2	0.0075	16.4	0.2	1.2	1	0	0	1	1	1	1	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
DZR	PF12773.7	gi|298674529|ref|YP_003726279.1|	-	0.0096	15.9	1.6	0.018	15.1	1.6	1.4	1	1	0	1	1	1	1	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.11	gi|298674529|ref|YP_003726279.1|	-	0.017	15.0	0.4	0.019	14.9	0.4	1.1	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
PriA_CRR	PF18319.1	gi|298674529|ref|YP_003726279.1|	-	0.021	14.8	0.7	0.078	13.0	0.7	1.9	1	1	0	1	1	1	0	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
A2L_zn_ribbon	PF08792.10	gi|298674529|ref|YP_003726279.1|	-	0.021	14.5	0.5	1.9	8.3	0.0	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|298674529|ref|YP_003726279.1|	-	0.024	14.0	2.5	0.53	9.8	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1451	PF07295.11	gi|298674529|ref|YP_003726279.1|	-	0.041	13.9	0.7	0.043	13.9	0.7	1.0	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674529|ref|YP_003726279.1|	-	0.052	13.5	2.5	0.091	12.8	2.5	1.4	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF1936	PF09151.10	gi|298674529|ref|YP_003726279.1|	-	0.063	13.2	2.6	0.29	11.1	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
zinc_ribbon_13	PF09855.9	gi|298674529|ref|YP_003726279.1|	-	0.085	13.0	2.9	0.25	11.5	0.4	2.2	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
NOB1_Zn_bind	PF08772.11	gi|298674529|ref|YP_003726279.1|	-	0.17	12.1	5.2	0.48	10.6	0.5	2.0	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
RNA_POL_M_15KD	PF02150.16	gi|298674529|ref|YP_003726279.1|	-	0.17	11.8	5.5	0.91	9.5	5.5	1.9	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
TF_Zn_Ribbon	PF08271.12	gi|298674529|ref|YP_003726279.1|	-	0.52	9.9	4.3	1.4	8.5	4.1	1.8	1	1	1	2	2	2	0	TFIIB	zinc-binding
Rubrerythrin	PF02915.17	gi|298674531|ref|YP_003726281.1|	-	4.4e-08	33.6	1.0	5.2e-08	33.4	1.0	1.1	1	0	0	1	1	1	1	Rubrerythrin
DUF2383	PF09537.10	gi|298674531|ref|YP_003726281.1|	-	0.00074	19.8	0.4	0.00096	19.5	0.4	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2383)
COQ7	PF03232.13	gi|298674531|ref|YP_003726281.1|	-	0.00084	19.2	0.2	0.00099	18.9	0.2	1.1	1	0	0	1	1	1	1	Ubiquinone	biosynthesis	protein	COQ7
Ferritin_2	PF13668.6	gi|298674531|ref|YP_003726281.1|	-	0.001	19.3	0.0	0.0012	19.0	0.0	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
DUF2202	PF09968.9	gi|298674531|ref|YP_003726281.1|	-	0.013	15.4	0.3	0.015	15.2	0.3	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	domain	(DUF2202)
Ferritin	PF00210.24	gi|298674531|ref|YP_003726281.1|	-	0.037	14.0	1.3	0.044	13.7	1.3	1.1	1	0	0	1	1	1	0	Ferritin-like	domain
Mn_catalase	PF05067.12	gi|298674531|ref|YP_003726281.1|	-	0.039	12.9	0.3	0.041	12.9	0.3	1.0	1	0	0	1	1	1	0	Manganese	containing	catalase
ADK_lid	PF05191.14	gi|298674532|ref|YP_003726282.1|	-	9e-06	25.6	1.3	0.0081	16.1	0.0	2.3	2	0	0	2	2	2	2	Adenylate	kinase,	active	site	lid
zf-ribbon_3	PF13248.6	gi|298674532|ref|YP_003726282.1|	-	2.6e-05	23.4	1.9	0.025	14.0	0.2	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674532|ref|YP_003726282.1|	-	8e-05	22.5	2.5	0.067	13.2	0.1	2.1	1	1	1	2	2	2	2	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|298674532|ref|YP_003726282.1|	-	0.0002	20.9	3.7	0.032	14.0	0.8	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|298674532|ref|YP_003726282.1|	-	0.00059	19.3	0.7	0.19	11.3	0.2	2.4	2	0	0	2	2	2	1	TFIIB	zinc-binding
zinc_ribbon_4	PF13717.6	gi|298674532|ref|YP_003726282.1|	-	0.0018	18.2	1.1	0.079	12.9	0.0	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
Zn_ribbon_SprT	PF17283.2	gi|298674532|ref|YP_003726282.1|	-	0.0032	17.3	3.3	0.0056	16.6	3.3	1.5	1	1	0	1	1	1	1	SprT-like	zinc	ribbon	domain
zf-RING_4	PF14570.6	gi|298674532|ref|YP_003726282.1|	-	0.0034	17.1	3.0	0.0046	16.7	3.0	1.3	1	0	0	1	1	1	1	RING/Ubox	like	zinc-binding	domain
zf_C2H2_13	PF18508.1	gi|298674532|ref|YP_003726282.1|	-	0.0048	16.5	0.8	0.7	9.5	0.2	2.2	2	0	0	2	2	2	1	Zinc	finger	domain
PhnA_Zn_Ribbon	PF08274.12	gi|298674532|ref|YP_003726282.1|	-	0.0064	16.4	0.5	2.4	8.2	0.1	2.2	2	0	0	2	2	2	1	PhnA	Zinc-Ribbon
Elf1	PF05129.13	gi|298674532|ref|YP_003726282.1|	-	0.0069	16.4	0.1	0.0069	16.4	0.1	1.1	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
zf-C2HC_2	PF13913.6	gi|298674532|ref|YP_003726282.1|	-	0.009	15.9	1.4	1.4	8.9	0.0	2.2	2	0	0	2	2	2	1	zinc-finger	of	a	C2HC-type
Zn_Tnp_IS91	PF14319.6	gi|298674532|ref|YP_003726282.1|	-	0.011	15.7	1.0	0.32	11.1	1.1	2.0	1	1	0	1	1	1	0	Transposase	zinc-binding	domain
Prim_Zn_Ribbon	PF08273.12	gi|298674532|ref|YP_003726282.1|	-	0.012	15.9	4.4	0.022	15.0	4.4	1.5	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
zf-NADH-PPase	PF09297.11	gi|298674532|ref|YP_003726282.1|	-	0.012	15.2	0.9	3.7	7.3	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DZR	PF12773.7	gi|298674532|ref|YP_003726282.1|	-	0.016	15.2	2.5	0.079	13.0	2.5	1.9	1	1	0	1	1	1	0	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.11	gi|298674532|ref|YP_003726282.1|	-	0.022	14.7	1.1	0.068	13.1	1.1	1.7	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_9	PF14369.6	gi|298674532|ref|YP_003726282.1|	-	0.022	15.0	2.5	1.8	8.9	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon
UPF0547	PF10571.9	gi|298674532|ref|YP_003726282.1|	-	0.032	14.3	3.2	0.88	9.7	0.4	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Zn-ribbon_8	PF09723.10	gi|298674532|ref|YP_003726282.1|	-	0.05	13.7	1.5	7.8	6.7	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
DUF2387	PF09526.10	gi|298674532|ref|YP_003726282.1|	-	0.051	13.7	1.5	1	9.5	0.1	2.1	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
zf-ACC	PF17848.1	gi|298674532|ref|YP_003726282.1|	-	0.057	13.5	2.4	7.8	6.7	0.1	2.6	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf-C2H2_3	PF13878.6	gi|298674532|ref|YP_003726282.1|	-	0.067	13.0	0.4	1.5	8.7	0.0	2.3	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
DUF1610	PF07754.11	gi|298674532|ref|YP_003726282.1|	-	0.072	13.1	5.5	0.77	9.8	1.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
NRDD	PF13597.6	gi|298674532|ref|YP_003726282.1|	-	0.074	11.8	0.9	0.093	11.5	0.9	1.0	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
TerY_C	PF15616.6	gi|298674532|ref|YP_003726282.1|	-	0.083	13.0	1.0	0.17	12.0	1.0	1.5	1	1	0	1	1	1	0	TerY-C	metal	binding	domain
A2L_zn_ribbon	PF08792.10	gi|298674532|ref|YP_003726282.1|	-	0.092	12.5	3.0	3.8	7.3	0.2	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|298674532|ref|YP_003726282.1|	-	0.1	13.3	1.6	3.4	8.4	0.2	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
PknG_rubred	PF16919.5	gi|298674532|ref|YP_003726282.1|	-	0.12	12.5	0.5	0.15	12.2	0.5	1.1	1	0	0	1	1	1	0	Protein	kinase	G	rubredoxin	domain
Trm112p	PF03966.16	gi|298674532|ref|YP_003726282.1|	-	0.19	12.3	1.9	0.67	10.6	1.9	1.8	1	1	0	1	1	1	0	Trm112p-like	protein
DUF2752	PF10825.8	gi|298674532|ref|YP_003726282.1|	-	0.23	11.5	1.9	13	5.9	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2752)
Prok-RING_1	PF14446.6	gi|298674532|ref|YP_003726282.1|	-	0.27	11.2	5.2	5.9	6.9	0.3	2.2	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
zinc_ribbon_10	PF10058.9	gi|298674532|ref|YP_003726282.1|	-	0.43	10.4	5.2	1.5	8.6	5.2	1.8	1	1	0	1	1	1	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Ribosomal_L32p	PF01783.23	gi|298674532|ref|YP_003726282.1|	-	0.44	10.8	3.6	3	8.2	0.6	2.1	1	1	0	2	2	2	0	Ribosomal	L32p	protein	family
zf_Rg	PF17915.1	gi|298674532|ref|YP_003726282.1|	-	8.1	5.9	7.7	1.9e+02	1.5	7.8	2.1	1	1	0	1	1	1	0	Reverse	gyrase	zinc	finger
SDH_sah	PF01972.16	gi|298674533|ref|YP_003726283.1|	-	2.9e-87	292.3	1.2	3.4e-87	292.1	1.2	1.0	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
ECH_1	PF00378.20	gi|298674533|ref|YP_003726283.1|	-	0.0014	18.0	0.0	0.006	15.9	0.0	1.9	2	0	0	2	2	2	1	Enoyl-CoA	hydratase/isomerase
CLP_protease	PF00574.23	gi|298674533|ref|YP_003726283.1|	-	0.0032	17.4	0.2	0.0076	16.2	0.0	1.7	2	0	0	2	2	2	1	Clp	protease
PBP_dimer	PF03717.15	gi|298674533|ref|YP_003726283.1|	-	0.0097	16.3	0.1	0.014	15.8	0.1	1.2	1	0	0	1	1	1	1	Penicillin-binding	Protein	dimerisation	domain
Peptidase_S49	PF01343.18	gi|298674533|ref|YP_003726283.1|	-	0.024	14.6	0.0	0.074	13.0	0.0	1.7	2	0	0	2	2	2	0	Peptidase	family	S49
KbaA	PF14089.6	gi|298674533|ref|YP_003726283.1|	-	0.05	13.4	0.5	0.076	12.9	0.5	1.2	1	0	0	1	1	1	0	KinB-signalling	pathway	activation	in	sporulation
DUF3864	PF12980.7	gi|298674533|ref|YP_003726283.1|	-	0.14	12.5	0.0	0.33	11.3	0.0	1.7	1	0	0	1	1	1	0	Domain	of	Unknown	Function	with	PDB	structure	(DUF3864)
DUF1743	PF08489.11	gi|298674534|ref|YP_003726284.1|	-	1.6e-10	41.0	0.0	3.8e-07	30.2	0.0	3.4	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF1743)
YorP	PF09629.10	gi|298674534|ref|YP_003726284.1|	-	0.01	16.0	0.0	0.039	14.1	0.0	2.1	2	0	0	2	2	2	0	YorP	protein
TPP_enzyme_C	PF02775.21	gi|298674535|ref|YP_003726285.1|	-	8.5e-11	41.9	0.2	1.7e-10	40.9	0.2	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_N	PF02776.18	gi|298674535|ref|YP_003726285.1|	-	1e-05	25.2	0.0	0.0045	16.6	0.0	2.4	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|298674535|ref|YP_003726285.1|	-	0.011	15.5	0.0	0.022	14.5	0.0	1.4	1	0	0	1	1	1	0	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|298674535|ref|YP_003726285.1|	-	0.029	14.7	0.0	0.084	13.2	0.0	1.8	1	0	0	1	1	1	0	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
C1_2	PF03107.16	gi|298674536|ref|YP_003726286.1|	-	0.0031	17.8	2.2	0.004	17.4	2.2	1.2	1	0	0	1	1	1	1	C1	domain
C1_1	PF00130.22	gi|298674536|ref|YP_003726286.1|	-	0.0049	16.7	1.0	0.0064	16.4	1.0	1.2	1	0	0	1	1	1	1	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
A2L_zn_ribbon	PF08792.10	gi|298674536|ref|YP_003726286.1|	-	0.025	14.3	3.8	0.39	10.5	0.5	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-UDP	PF14569.6	gi|298674536|ref|YP_003726286.1|	-	0.031	14.4	0.1	0.034	14.3	0.1	1.2	1	0	0	1	1	1	0	Zinc-binding	RING-finger
Baculo_ME53	PF06061.11	gi|298674536|ref|YP_003726286.1|	-	0.035	13.3	1.0	0.037	13.3	1.0	1.0	1	0	0	1	1	1	0	Baculoviridae	ME53
Rubredoxin_2	PF18073.1	gi|298674536|ref|YP_003726286.1|	-	3.7	7.3	7.5	0.36	10.6	2.7	1.7	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Cys_rich_CPCC	PF14206.6	gi|298674537|ref|YP_003726287.1|	-	0.00055	19.7	0.7	0.0006	19.6	0.7	1.2	1	0	0	1	1	1	1	Cysteine-rich	CPCC
RPA_interact_C	PF14768.6	gi|298674537|ref|YP_003726287.1|	-	0.0073	16.9	0.4	0.0076	16.8	0.4	1.1	1	0	0	1	1	1	1	Replication	protein	A	interacting	C-terminal
RNA_POL_M_15KD	PF02150.16	gi|298674537|ref|YP_003726287.1|	-	0.01	15.7	0.8	0.013	15.3	0.8	1.2	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
A2L_zn_ribbon	PF08792.10	gi|298674537|ref|YP_003726287.1|	-	0.015	15.0	1.7	0.02	14.6	1.7	1.2	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
PHF5	PF03660.14	gi|298674537|ref|YP_003726287.1|	-	0.017	15.3	0.4	0.019	15.2	0.4	1.0	1	0	0	1	1	1	0	PHF5-like	protein
Prok-RING_1	PF14446.6	gi|298674537|ref|YP_003726287.1|	-	0.019	14.9	0.5	0.025	14.5	0.5	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
DNA_ligase_ZBD	PF03119.16	gi|298674537|ref|YP_003726287.1|	-	0.022	14.8	0.3	0.062	13.3	0.3	1.8	1	1	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DZR	PF12773.7	gi|298674537|ref|YP_003726287.1|	-	0.045	13.8	0.3	0.064	13.3	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
ADK_lid	PF05191.14	gi|298674537|ref|YP_003726287.1|	-	0.06	13.3	0.5	1.1	9.3	0.1	2.0	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-C3HC4_5	PF17121.5	gi|298674537|ref|YP_003726287.1|	-	0.063	13.2	3.1	0.12	12.3	3.1	1.5	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-piccolo	PF05715.13	gi|298674537|ref|YP_003726287.1|	-	0.077	13.2	4.4	5	7.3	4.4	2.1	1	1	0	1	1	1	0	Piccolo	Zn-finger
DUF2225	PF09986.9	gi|298674537|ref|YP_003726287.1|	-	0.38	10.5	4.0	0.41	10.3	0.1	2.0	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
RecR	PF02132.15	gi|298674537|ref|YP_003726287.1|	-	0.53	9.9	4.5	4.4	7.0	0.3	2.1	1	1	1	2	2	2	0	RecR	protein
HAD_2	PF13419.6	gi|298674538|ref|YP_003726288.1|	-	5.4e-17	62.5	0.5	9.3e-17	61.7	0.5	1.4	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|298674538|ref|YP_003726288.1|	-	1.1e-05	25.9	0.0	8.4e-05	23.0	0.0	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|298674538|ref|YP_003726288.1|	-	1.2e-05	25.3	0.0	2e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
Type_III_YscG	PF09477.10	gi|298674538|ref|YP_003726288.1|	-	0.071	13.2	0.0	0.12	12.4	0.0	1.4	1	0	0	1	1	1	0	Bacterial	type	II	secretion	system	chaperone	protein	(type_III_yscG)
APH	PF01636.23	gi|298674539|ref|YP_003726289.1|	-	5.5e-12	46.1	0.0	6.9e-12	45.8	0.0	1.1	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
RIO1	PF01163.22	gi|298674539|ref|YP_003726289.1|	-	4.5e-06	26.4	3.2	0.0099	15.5	0.6	2.2	2	0	0	2	2	2	2	RIO1	family
Choline_kinase	PF01633.20	gi|298674539|ref|YP_003726289.1|	-	4e-05	23.3	2.6	0.0007	19.2	2.6	2.3	1	1	0	1	1	1	1	Choline/ethanolamine	kinase
APH_6_hur	PF04655.14	gi|298674539|ref|YP_003726289.1|	-	0.043	13.2	0.0	0.073	12.4	0.0	1.3	1	0	0	1	1	1	0	Aminoglycoside/hydroxyurea	antibiotic	resistance	kinase
Hemopexin	PF00045.19	gi|298674539|ref|YP_003726289.1|	-	0.044	13.7	0.1	0.12	12.3	0.0	1.8	2	0	0	2	2	2	0	Hemopexin
MSA-2c	PF12238.8	gi|298674539|ref|YP_003726289.1|	-	0.2	11.7	1.9	0.48	10.4	1.9	1.7	1	1	0	1	1	1	0	Merozoite	surface	antigen	2c
AAA_2	PF07724.14	gi|298674540|ref|YP_003726290.1|	-	2.6e-59	200.2	4.5	1.6e-56	191.1	0.0	3.4	3	0	0	3	3	2	2	AAA	domain	(Cdc48	subfamily)
AAA_lid_9	PF17871.1	gi|298674540|ref|YP_003726290.1|	-	2.7e-36	123.6	2.3	2.7e-36	123.6	2.3	3.9	2	1	0	3	3	2	1	AAA	lid	domain
Clp_N	PF02861.20	gi|298674540|ref|YP_003726290.1|	-	2.8e-32	110.6	0.9	7.4e-15	54.8	0.1	3.3	3	0	0	3	3	3	2	Clp	amino	terminal	domain,	pathogenicity	island	component
AAA	PF00004.29	gi|298674540|ref|YP_003726290.1|	-	3.2e-25	89.1	0.1	4.6e-12	46.5	0.0	3.1	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
ClpB_D2-small	PF10431.9	gi|298674540|ref|YP_003726290.1|	-	4.1e-25	87.7	1.9	1.5e-24	85.8	0.8	2.7	2	0	0	2	2	1	1	C-terminal,	D2-small	domain,	of	ClpB	protein
AAA_5	PF07728.14	gi|298674540|ref|YP_003726290.1|	-	5.4e-18	65.3	0.7	7.7e-13	48.6	0.0	3.6	3	2	0	4	4	2	2	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|298674540|ref|YP_003726290.1|	-	4.9e-11	43.3	6.3	0.0001	22.7	0.1	4.7	4	2	1	5	5	3	2	AAA	ATPase	domain
Sigma54_activat	PF00158.26	gi|298674540|ref|YP_003726290.1|	-	4.8e-08	32.9	0.0	4e-05	23.4	0.0	2.6	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_18	PF13238.6	gi|298674540|ref|YP_003726290.1|	-	9.9e-08	32.6	1.6	0.0091	16.5	0.0	3.8	3	0	0	3	3	3	2	AAA	domain
AAA_22	PF13401.6	gi|298674540|ref|YP_003726290.1|	-	1.6e-07	31.7	2.9	0.11	12.8	0.0	5.2	3	2	1	4	4	4	2	AAA	domain
AAA_14	PF13173.6	gi|298674540|ref|YP_003726290.1|	-	3.9e-07	30.2	0.0	0.03	14.4	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.17	gi|298674540|ref|YP_003726290.1|	-	7.9e-07	29.0	0.0	0.015	15.0	0.0	2.9	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
NACHT	PF05729.12	gi|298674540|ref|YP_003726290.1|	-	1.8e-06	28.0	0.0	0.0095	15.9	0.0	3.4	4	1	0	4	4	2	2	NACHT	domain
TniB	PF05621.11	gi|298674540|ref|YP_003726290.1|	-	2.6e-06	27.0	0.0	0.0024	17.3	0.0	3.6	2	1	0	2	2	2	1	Bacterial	TniB	protein
AAA_7	PF12775.7	gi|298674540|ref|YP_003726290.1|	-	2.7e-06	27.0	0.0	0.026	14.1	0.0	2.6	2	0	0	2	2	2	2	P-loop	containing	dynein	motor	region
Roc	PF08477.13	gi|298674540|ref|YP_003726290.1|	-	2.3e-05	24.6	0.0	0.24	11.6	0.0	3.3	3	0	0	3	3	2	2	Ras	of	Complex,	Roc,	domain	of	DAPkinase
RsgA_GTPase	PF03193.16	gi|298674540|ref|YP_003726290.1|	-	4.5e-05	23.4	0.0	0.73	9.7	0.0	3.4	2	1	0	3	3	3	2	RsgA	GTPase
RNA_helicase	PF00910.22	gi|298674540|ref|YP_003726290.1|	-	6.4e-05	23.3	0.0	0.17	12.3	0.0	3.3	3	0	0	3	3	2	1	RNA	helicase
ATPase_2	PF01637.18	gi|298674540|ref|YP_003726290.1|	-	0.00023	21.1	12.2	0.64	9.9	0.1	5.0	3	2	1	4	4	3	2	ATPase	domain	predominantly	from	Archaea
ABC_tran	PF00005.27	gi|298674540|ref|YP_003726290.1|	-	0.00048	20.6	3.7	0.66	10.5	0.0	4.3	4	0	0	4	4	3	1	ABC	transporter
RuvB_N	PF05496.12	gi|298674540|ref|YP_003726290.1|	-	0.00073	19.3	1.6	0.21	11.3	0.0	4.1	3	1	0	3	3	3	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Torsin	PF06309.11	gi|298674540|ref|YP_003726290.1|	-	0.00085	19.4	0.0	0.0043	17.1	0.0	2.1	2	0	0	2	2	1	1	Torsin
Zeta_toxin	PF06414.12	gi|298674540|ref|YP_003726290.1|	-	0.00092	18.5	0.0	0.036	13.4	0.0	2.7	2	0	0	2	2	2	1	Zeta	toxin
AAA_33	PF13671.6	gi|298674540|ref|YP_003726290.1|	-	0.00093	19.4	0.0	0.2	11.8	0.0	2.9	2	0	0	2	2	2	1	AAA	domain
TsaE	PF02367.17	gi|298674540|ref|YP_003726290.1|	-	0.0011	18.9	0.3	1.6	8.7	0.0	2.9	3	0	0	3	3	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_28	PF13521.6	gi|298674540|ref|YP_003726290.1|	-	0.0015	18.8	1.6	0.69	10.1	0.0	3.9	4	0	0	4	4	3	1	AAA	domain
Mg_chelatase	PF01078.21	gi|298674540|ref|YP_003726290.1|	-	0.0022	17.4	0.1	0.82	9.0	0.1	3.6	2	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
DUF815	PF05673.13	gi|298674540|ref|YP_003726290.1|	-	0.0029	16.8	2.5	0.22	10.7	0.1	3.5	2	2	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
Bac_DnaA	PF00308.18	gi|298674540|ref|YP_003726290.1|	-	0.0046	16.8	0.9	1.7	8.5	0.0	3.5	4	0	0	4	4	2	1	Bacterial	dnaA	protein
PhoH	PF02562.16	gi|298674540|ref|YP_003726290.1|	-	0.005	16.3	0.0	0.76	9.2	0.0	2.8	2	0	0	2	2	2	1	PhoH-like	protein
DNA_pol3_delta2	PF13177.6	gi|298674540|ref|YP_003726290.1|	-	0.0068	16.2	0.0	0.54	10.0	0.0	2.8	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_24	PF13479.6	gi|298674540|ref|YP_003726290.1|	-	0.0081	15.9	0.0	1.9	8.1	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.6	gi|298674540|ref|YP_003726290.1|	-	0.01	15.4	1.1	1.7	8.1	0.0	3.0	2	1	1	3	3	3	0	AAA	domain
AAA_30	PF13604.6	gi|298674540|ref|YP_003726290.1|	-	0.02	14.6	0.0	2.3	7.9	0.0	3.0	2	0	0	2	2	2	0	AAA	domain
Ras	PF00071.22	gi|298674540|ref|YP_003726290.1|	-	0.021	14.4	0.3	18	4.9	0.0	3.8	4	0	0	4	4	3	0	Ras	family
AAA_29	PF13555.6	gi|298674540|ref|YP_003726290.1|	-	0.069	12.9	0.0	9.8	6.0	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
PduV-EutP	PF10662.9	gi|298674540|ref|YP_003726290.1|	-	0.069	12.9	0.1	4.2	7.1	0.0	3.1	3	0	0	3	3	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
SRP54	PF00448.22	gi|298674540|ref|YP_003726290.1|	-	0.085	12.5	0.0	10	5.7	0.0	2.8	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_3	PF07726.11	gi|298674540|ref|YP_003726290.1|	-	0.096	12.5	0.2	4	7.3	0.1	3.0	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ResIII	PF04851.15	gi|298674540|ref|YP_003726290.1|	-	0.2	11.7	8.5	0.83	9.6	0.0	4.5	4	1	0	5	5	3	0	Type	III	restriction	enzyme,	res	subunit
DUF87	PF01935.17	gi|298674540|ref|YP_003726290.1|	-	0.23	11.5	16.6	1.1	9.3	0.1	4.9	4	1	0	4	4	4	0	Helicase	HerA,	central	domain
AAA_23	PF13476.6	gi|298674540|ref|YP_003726290.1|	-	0.9	10.0	36.6	0.1	13.1	0.2	4.5	2	1	1	3	3	2	0	AAA	domain
Atg14	PF10186.9	gi|298674540|ref|YP_003726290.1|	-	3.7	6.5	12.6	8	5.5	12.6	1.5	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
ALMT	PF11744.8	gi|298674540|ref|YP_003726290.1|	-	4.7	5.9	6.9	9.4	4.9	6.9	1.4	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
LMBR1	PF04791.16	gi|298674540|ref|YP_003726290.1|	-	5	5.9	4.0	11	4.9	4.0	1.6	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
V_ATPase_I	PF01496.19	gi|298674540|ref|YP_003726290.1|	-	5.7	4.7	8.7	4.2	5.2	6.9	1.8	2	0	0	2	2	2	0	V-type	ATPase	116kDa	subunit	family
KELK	PF15796.5	gi|298674540|ref|YP_003726290.1|	-	6	7.4	26.7	0.29	11.6	13.6	4.7	4	0	0	4	4	3	0	KELK-motif	containing	domain	of	MRCK	Ser/Thr	protein	kinase
YdjM	PF04307.14	gi|298674541|ref|YP_003726291.1|	-	1.9e-14	53.3	1.4	3.6e-13	49.2	1.4	2.0	1	1	0	1	1	1	1	LexA-binding,	inner	membrane-associated	putative	hydrolase
Zn_dep_PLPC	PF00882.18	gi|298674541|ref|YP_003726291.1|	-	0.034	14.1	0.1	0.052	13.6	0.1	1.2	1	0	0	1	1	1	0	Zinc	dependent	phospholipase	C
SieB	PF14163.6	gi|298674541|ref|YP_003726291.1|	-	0.065	12.7	0.6	0.25	10.8	0.1	2.0	2	1	0	2	2	2	0	Super-infection	exclusion	protein	B
PH_4	PF15404.6	gi|298674541|ref|YP_003726291.1|	-	0.075	12.8	0.1	0.094	12.5	0.1	1.2	1	0	0	1	1	1	0	Pleckstrin	homology	domain
DUF2085	PF09858.9	gi|298674541|ref|YP_003726291.1|	-	2.5	8.6	5.5	45	4.6	5.5	2.0	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2085)
DUF1464	PF07318.12	gi|298674542|ref|YP_003726292.1|	-	0.0047	16.1	0.7	0.0066	15.6	0.7	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
DUF1910	PF08928.10	gi|298674542|ref|YP_003726292.1|	-	0.015	15.3	0.0	0.025	14.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1910)
DUF2103	PF09876.9	gi|298674543|ref|YP_003726293.1|	-	1.8e-37	127.3	0.9	2.1e-37	127.1	0.9	1.1	1	0	0	1	1	1	1	Predicted	metal-binding	protein	(DUF2103)
ACT	PF01842.25	gi|298674544|ref|YP_003726294.1|	-	4.3e-15	55.2	0.3	2.1e-06	27.4	0.1	2.2	2	0	0	2	2	2	2	ACT	domain
ACT_4	PF13291.6	gi|298674544|ref|YP_003726294.1|	-	3.3e-09	37.2	1.1	5.8e-05	23.6	0.1	2.2	2	0	0	2	2	2	2	ACT	domain
ACT_7	PF13840.6	gi|298674544|ref|YP_003726294.1|	-	5.2e-05	22.9	0.1	0.21	11.4	0.0	2.7	2	2	0	2	2	2	2	ACT	domain
Glyco_hydro_28	PF00295.17	gi|298674544|ref|YP_003726294.1|	-	0.056	12.5	0.3	0.23	10.5	0.1	1.8	1	1	1	2	2	2	0	Glycosyl	hydrolases	family	28
AMP-binding_C_2	PF14535.6	gi|298674545|ref|YP_003726295.1|	-	2.6e-33	114.2	1.9	3e-32	110.8	1.4	2.3	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.28	gi|298674545|ref|YP_003726295.1|	-	2.3e-12	46.2	0.7	3.2e-11	42.5	0.0	2.4	2	1	0	2	2	2	1	AMP-binding	enzyme
GH3	PF03321.13	gi|298674545|ref|YP_003726295.1|	-	0.029	13.2	0.0	0.36	9.6	0.0	2.1	2	0	0	2	2	2	0	GH3	auxin-responsive	promoter
DHH	PF01368.20	gi|298674546|ref|YP_003726296.1|	-	1.4e-12	47.7	0.1	3.3e-12	46.5	0.1	1.6	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.19	gi|298674546|ref|YP_003726296.1|	-	6.6e-11	42.8	0.2	1.1e-10	42.1	0.2	1.4	1	0	0	1	1	1	1	DHHA1	domain
Prefoldin_2	PF01920.20	gi|298674547|ref|YP_003726297.1|	-	9.4e-25	86.6	24.3	1.1e-24	86.4	24.3	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
Prefoldin	PF02996.17	gi|298674547|ref|YP_003726297.1|	-	9.8e-05	22.3	14.7	0.0083	16.0	4.1	2.3	1	1	1	2	2	2	2	Prefoldin	subunit
ADPrib_exo_Tox	PF03496.14	gi|298674547|ref|YP_003726297.1|	-	0.029	13.7	5.4	0.041	13.2	5.4	1.3	1	1	0	1	1	1	0	ADP-ribosyltransferase	exoenzyme
FlaC_arch	PF05377.11	gi|298674547|ref|YP_003726297.1|	-	0.068	13.6	11.8	0.16	12.4	2.9	2.4	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
DUF4041	PF13250.6	gi|298674547|ref|YP_003726297.1|	-	0.08	12.8	1.5	6.4	6.7	0.0	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4041)
DUF3450	PF11932.8	gi|298674547|ref|YP_003726297.1|	-	0.17	11.1	27.4	0.39	10.0	11.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
UPF0147	PF03685.13	gi|298674547|ref|YP_003726297.1|	-	0.55	10.3	4.8	0.22	11.6	0.6	2.2	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0147)
Spc7	PF08317.11	gi|298674547|ref|YP_003726297.1|	-	0.72	8.7	22.9	0.44	9.4	6.5	2.0	1	1	1	2	2	2	0	Spc7	kinetochore	protein
FapA	PF03961.13	gi|298674547|ref|YP_003726297.1|	-	0.8	8.2	12.8	1.1	7.8	12.8	1.3	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
GAS	PF13851.6	gi|298674547|ref|YP_003726297.1|	-	0.91	8.8	23.9	5.1	6.4	23.9	1.8	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
DUF948	PF06103.11	gi|298674547|ref|YP_003726297.1|	-	1.5	9.1	8.2	5.1	7.4	4.4	2.3	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Sec34	PF04136.15	gi|298674547|ref|YP_003726297.1|	-	1.6	8.6	13.7	2	8.3	3.2	2.1	2	0	0	2	2	2	0	Sec34-like	family
DUF2852	PF11014.8	gi|298674547|ref|YP_003726297.1|	-	2.3	8.4	6.8	6.8	6.9	6.9	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2852)
DUF3552	PF12072.8	gi|298674547|ref|YP_003726297.1|	-	2.5	7.5	25.1	0.84	9.0	7.8	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3552)
DUF3584	PF12128.8	gi|298674547|ref|YP_003726297.1|	-	2.5	5.5	23.3	2.7	5.4	23.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
HAUS-augmin3	PF14932.6	gi|298674547|ref|YP_003726297.1|	-	2.5	7.6	24.9	1	8.9	10.2	2.0	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
DUF4509	PF14970.6	gi|298674547|ref|YP_003726297.1|	-	2.6	8.0	15.0	0.44	10.5	3.2	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4509)
UPF0242	PF06785.11	gi|298674547|ref|YP_003726297.1|	-	2.8	8.0	24.4	6.1	6.9	24.4	1.5	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
DUF4407	PF14362.6	gi|298674547|ref|YP_003726297.1|	-	2.9	7.2	16.8	3	7.1	16.8	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Laminin_II	PF06009.12	gi|298674547|ref|YP_003726297.1|	-	2.9	7.9	17.6	39	4.3	17.6	2.0	1	1	0	1	1	1	0	Laminin	Domain	II
BLOC1_2	PF10046.9	gi|298674547|ref|YP_003726297.1|	-	3	8.2	16.9	3.7	7.9	5.7	2.3	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
AAA_11	PF13086.6	gi|298674547|ref|YP_003726297.1|	-	3.5	7.3	13.8	3.8	7.2	13.8	1.0	1	0	0	1	1	1	0	AAA	domain
DUF4795	PF16043.5	gi|298674547|ref|YP_003726297.1|	-	4.3	6.9	20.6	32	4.1	20.8	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
DUF4140	PF13600.6	gi|298674547|ref|YP_003726297.1|	-	4.4	7.8	13.6	1.8	9.1	2.0	2.3	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Spc24	PF08286.11	gi|298674547|ref|YP_003726297.1|	-	4.7	7.5	20.6	1.8	8.8	6.3	2.2	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
AAA_lid_9	PF17871.1	gi|298674547|ref|YP_003726297.1|	-	5.9	6.9	13.3	5.3	7.0	1.6	2.2	2	0	0	2	2	2	0	AAA	lid	domain
PilO	PF04350.13	gi|298674547|ref|YP_003726297.1|	-	6	7.0	19.5	2.2	8.5	7.8	2.1	1	1	1	2	2	2	0	Pilus	assembly	protein,	PilO
XhlA	PF10779.9	gi|298674547|ref|YP_003726297.1|	-	6.3	7.1	10.3	0.7	10.1	2.1	2.2	2	0	0	2	2	2	0	Haemolysin	XhlA
LMBR1	PF04791.16	gi|298674547|ref|YP_003726297.1|	-	8	5.2	11.1	9.9	4.9	11.1	1.0	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
Pcc1	PF09341.10	gi|298674548|ref|YP_003726298.1|	-	1.1e-08	35.1	0.1	1.3e-08	34.8	0.1	1.2	1	0	0	1	1	1	1	Transcription	factor	Pcc1
Wap1	PF16997.5	gi|298674548|ref|YP_003726298.1|	-	0.12	11.5	0.0	0.12	11.5	0.0	1.0	1	0	0	1	1	1	0	Wap1	domain
Cytidylate_kin	PF02224.18	gi|298674549|ref|YP_003726299.1|	-	0.037	13.8	0.0	0.29	10.8	0.0	1.9	2	0	0	2	2	2	0	Cytidylate	kinase
Hat1_N	PF10394.9	gi|298674549|ref|YP_003726299.1|	-	0.051	13.8	0.1	0.08	13.2	0.1	1.3	1	0	0	1	1	1	0	Histone	acetyl	transferase	HAT1	N-terminus
DNA_RNApol_7kD	PF03604.13	gi|298674550|ref|YP_003726300.1|	-	2.9e-08	33.2	8.7	4.3e-08	32.7	8.7	1.3	1	0	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ribbon_3	PF13248.6	gi|298674550|ref|YP_003726300.1|	-	0.00012	21.3	0.6	0.0079	15.6	0.1	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|298674550|ref|YP_003726300.1|	-	0.00015	21.6	2.3	0.00022	21.1	2.3	1.4	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf_UBZ	PF18439.1	gi|298674550|ref|YP_003726300.1|	-	0.00053	19.5	5.4	0.25	11.0	0.0	2.5	2	1	0	2	2	2	2	Ubiquitin-Binding	Zinc	Finger
HypA	PF01155.19	gi|298674550|ref|YP_003726300.1|	-	0.0031	17.5	0.3	0.0031	17.5	0.3	1.1	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_6	PF14599.6	gi|298674550|ref|YP_003726300.1|	-	0.0043	17.0	2.0	0.0058	16.6	2.0	1.3	1	0	0	1	1	1	1	Zinc-ribbon
zinc_ribbon_2	PF13240.6	gi|298674550|ref|YP_003726300.1|	-	0.0044	16.7	2.4	0.0082	15.8	2.4	1.5	1	1	0	1	1	1	1	zinc-ribbon	domain
DUF951	PF06107.11	gi|298674550|ref|YP_003726300.1|	-	0.01	15.7	3.0	0.11	12.5	0.2	2.0	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF951)
Zn-ribbon_8	PF09723.10	gi|298674550|ref|YP_003726300.1|	-	0.011	15.9	3.1	0.019	15.1	3.1	1.5	1	1	0	1	1	1	0	Zinc	ribbon	domain
DUF2072	PF09845.9	gi|298674550|ref|YP_003726300.1|	-	0.018	15.3	0.5	0.018	15.3	0.5	1.1	1	0	0	1	1	1	0	Zn-ribbon	containing	protein
zf-C2HC5	PF06221.13	gi|298674550|ref|YP_003726300.1|	-	0.021	14.8	0.2	0.024	14.6	0.2	1.1	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
zinc_ribbon_4	PF13717.6	gi|298674550|ref|YP_003726300.1|	-	0.025	14.5	3.6	0.69	9.9	3.6	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674550|ref|YP_003726300.1|	-	0.03	14.3	4.6	0.13	12.2	0.2	2.1	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-HYPF	PF07503.12	gi|298674550|ref|YP_003726300.1|	-	0.037	13.8	3.5	0.049	13.4	0.6	2.0	2	0	0	2	2	2	0	HypF	finger
DZR	PF12773.7	gi|298674550|ref|YP_003726300.1|	-	0.038	14.0	0.8	0.063	13.3	0.8	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.12	gi|298674550|ref|YP_003726300.1|	-	0.038	13.5	3.0	0.11	12.0	3.2	1.6	1	1	1	2	2	2	0	TFIIB	zinc-binding
TFIIS_C	PF01096.18	gi|298674550|ref|YP_003726300.1|	-	0.039	13.8	2.7	4.2	7.3	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Cys_rich_CPXG	PF14255.6	gi|298674550|ref|YP_003726300.1|	-	0.048	13.6	0.2	0.048	13.6	0.2	1.9	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
zinc_ribbon_9	PF14369.6	gi|298674550|ref|YP_003726300.1|	-	0.05	13.9	1.1	0.067	13.5	1.1	1.2	1	0	0	1	1	1	0	zinc-ribbon
zf-ACC	PF17848.1	gi|298674550|ref|YP_003726300.1|	-	0.054	13.6	2.0	7.3	6.8	0.1	2.2	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
CpXC	PF14353.6	gi|298674550|ref|YP_003726300.1|	-	0.12	12.5	1.3	0.67	10.0	0.1	2.0	1	1	1	2	2	2	0	CpXC	protein
zf-C2H2	PF00096.26	gi|298674550|ref|YP_003726300.1|	-	0.31	11.6	4.2	10	6.8	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Desulfoferrod_N	PF06397.12	gi|298674550|ref|YP_003726300.1|	-	1.3	8.7	6.2	1.6	8.4	1.2	2.1	1	1	1	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
Ribosomal_L37ae	PF01780.19	gi|298674551|ref|YP_003726301.1|	-	1.9e-33	114.4	6.7	2.2e-33	114.2	6.7	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
HalOD2	PF18547.1	gi|298674551|ref|YP_003726301.1|	-	0.0072	16.2	8.3	0.079	12.9	7.1	2.5	1	1	1	2	2	2	1	Halobacterial	output	domain	2
DUF951	PF06107.11	gi|298674551|ref|YP_003726301.1|	-	0.012	15.5	1.3	0.018	14.9	1.3	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF951)
Zn_Tnp_IS1595	PF12760.7	gi|298674551|ref|YP_003726301.1|	-	0.012	15.6	4.1	0.021	14.8	4.1	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|298674551|ref|YP_003726301.1|	-	0.015	15.2	1.5	0.026	14.5	1.5	1.4	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_4	PF13717.6	gi|298674551|ref|YP_003726301.1|	-	0.017	15.1	3.7	0.55	10.2	0.3	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|298674551|ref|YP_003726301.1|	-	0.031	14.4	0.8	2.5	8.3	0.1	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
TFIIS_C	PF01096.18	gi|298674551|ref|YP_003726301.1|	-	0.063	13.1	2.2	1.8	8.5	0.4	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-H2C2_2	PF13465.6	gi|298674551|ref|YP_003726301.1|	-	0.081	13.4	3.2	2.8	8.5	0.1	2.2	1	1	1	2	2	2	0	Zinc-finger	double	domain
Rubredoxin_2	PF18073.1	gi|298674551|ref|YP_003726301.1|	-	0.11	12.3	3.3	4.2	7.2	0.3	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
zinc_ribbon_5	PF13719.6	gi|298674551|ref|YP_003726301.1|	-	0.31	10.8	3.4	9.9	6.0	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
RNase_PH	PF01138.21	gi|298674552|ref|YP_003726302.1|	-	3.2e-30	105.3	0.0	6e-30	104.5	0.0	1.4	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|298674552|ref|YP_003726302.1|	-	1.1e-10	41.3	0.2	2e-10	40.6	0.2	1.4	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.21	gi|298674553|ref|YP_003726303.1|	-	6e-33	114.2	0.3	2.7e-32	112.1	0.0	2.0	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|298674553|ref|YP_003726303.1|	-	3e-17	62.4	0.7	5.5e-17	61.5	0.7	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
SBDS	PF01172.18	gi|298674554|ref|YP_003726304.1|	-	2.2e-25	88.5	0.9	4.1e-25	87.7	0.9	1.5	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.10	gi|298674554|ref|YP_003726304.1|	-	1.4e-23	83.1	0.3	2.2e-23	82.5	0.3	1.3	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
EFG_C	PF00679.24	gi|298674554|ref|YP_003726304.1|	-	0.057	13.5	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	Elongation	factor	G	C-terminus
Proteasome	PF00227.26	gi|298674555|ref|YP_003726305.1|	-	3.2e-60	202.9	0.4	4.7e-60	202.3	0.4	1.2	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.9	gi|298674555|ref|YP_003726305.1|	-	1.2e-14	53.6	0.5	4.3e-14	51.9	0.1	2.1	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
Synuclein	PF01387.17	gi|298674555|ref|YP_003726305.1|	-	2.4	8.4	6.2	2.8	8.2	1.6	2.6	2	1	1	3	3	3	0	Synuclein
RNase_P_Rpp14	PF01900.19	gi|298674556|ref|YP_003726306.1|	-	2.8e-19	69.3	0.1	3.3e-19	69.0	0.1	1.1	1	0	0	1	1	1	1	Rpp14/Pop5	family
RNase_P_p30	PF01876.16	gi|298674557|ref|YP_003726307.1|	-	4.8e-48	163.5	0.0	6.4e-48	163.1	0.0	1.1	1	0	0	1	1	1	1	RNase	P	subunit	p30
PHP	PF02811.19	gi|298674557|ref|YP_003726307.1|	-	0.0011	19.3	0.1	0.0019	18.6	0.1	1.2	1	1	0	1	1	1	1	PHP	domain
Amidohydro_2	PF04909.14	gi|298674557|ref|YP_003726307.1|	-	0.093	12.5	0.0	2.7	7.7	0.0	2.6	1	1	1	2	2	2	0	Amidohydrolase
RNA_binding	PF01877.17	gi|298674558|ref|YP_003726308.1|	-	1.2e-32	112.7	0.8	1.4e-32	112.4	0.8	1.0	1	0	0	1	1	1	1	RNA	binding
Ribosomal_L15e	PF00827.17	gi|298674559|ref|YP_003726309.1|	-	5.8e-81	270.8	14.2	6.5e-81	270.6	14.2	1.0	1	0	0	1	1	1	1	Ribosomal	L15
YjbF	PF11102.8	gi|298674559|ref|YP_003726309.1|	-	0.19	11.5	1.3	0.69	9.7	1.3	1.8	1	1	0	1	1	1	0	Group	4	capsule	polysaccharide	lipoprotein	gfcB,	YjbF
Phage_integrase	PF00589.22	gi|298674561|ref|YP_003726311.1|	-	9.6e-24	84.1	0.5	1.9e-23	83.1	0.5	1.5	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.6	gi|298674561|ref|YP_003726311.1|	-	3.9e-06	27.2	0.1	1.1e-05	25.8	0.1	1.8	1	0	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
zinc_ribbon_2	PF13240.6	gi|298674561|ref|YP_003726311.1|	-	8.5e-05	22.1	2.2	0.00017	21.2	2.2	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|298674561|ref|YP_003726311.1|	-	0.00015	21.7	0.6	0.00027	20.9	0.6	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-NADH-PPase	PF09297.11	gi|298674561|ref|YP_003726311.1|	-	0.0014	18.2	3.1	0.066	12.9	0.2	2.4	2	0	0	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
DUF35_N	PF12172.8	gi|298674561|ref|YP_003726311.1|	-	0.0017	18.2	0.8	0.003	17.4	0.8	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-ribbon_3	PF13248.6	gi|298674561|ref|YP_003726311.1|	-	0.011	15.1	1.9	0.02	14.3	1.9	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-RanBP	PF00641.18	gi|298674561|ref|YP_003726311.1|	-	0.016	14.5	1.6	0.029	13.7	1.6	1.4	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
zinc_ribbon_15	PF17032.5	gi|298674561|ref|YP_003726311.1|	-	0.017	15.8	0.5	0.036	14.8	0.5	1.5	1	0	0	1	1	1	0	zinc-ribbon	family
NOB1_Zn_bind	PF08772.11	gi|298674561|ref|YP_003726311.1|	-	0.093	12.9	0.2	0.24	11.6	0.2	1.7	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
OrfB_Zn_ribbon	PF07282.11	gi|298674561|ref|YP_003726311.1|	-	0.11	12.5	2.0	0.65	10.0	0.9	2.6	2	1	1	3	3	3	0	Putative	transposase	DNA-binding	domain
mono-CXXC	PF15626.6	gi|298674561|ref|YP_003726311.1|	-	0.11	12.9	0.3	0.22	11.9	0.3	1.5	1	0	0	1	1	1	0	single	CXXC	unit
Nudix_N_2	PF14803.6	gi|298674561|ref|YP_003726311.1|	-	0.16	11.9	0.0	0.16	11.9	0.0	1.9	2	0	0	2	2	2	0	Nudix	N-terminal
DUF2678	PF10856.8	gi|298674562|ref|YP_003726312.1|	-	0.05	13.5	0.6	0.05	13.5	0.6	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2678)
Sgf11	PF08209.11	gi|298674562|ref|YP_003726312.1|	-	0.097	12.3	0.2	0.097	12.3	0.2	1.9	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
S_4TM	PF18159.1	gi|298674562|ref|YP_003726312.1|	-	0.12	11.7	2.9	0.24	10.7	0.2	2.0	2	0	0	2	2	2	0	SMODS-associating	4TM	effector	domain
Deltameth_res	PF16020.5	gi|298674562|ref|YP_003726312.1|	-	0.53	10.2	3.6	0.54	10.2	0.2	2.6	2	1	1	3	3	3	0	Deltamethrin	resistance
CarboxypepD_reg	PF13620.6	gi|298674563|ref|YP_003726313.1|	-	7.2e-08	32.6	4.2	0.00019	21.6	0.2	3.7	4	0	0	4	4	4	2	Carboxypeptidase	regulatory-like	domain
bMG3	PF11974.8	gi|298674563|ref|YP_003726313.1|	-	4.7e-05	23.3	0.1	0.0026	17.8	0.0	3.1	3	0	0	3	3	3	1	Bacterial	alpha-2-macroglobulin	MG3	domain
Big_7	PF17957.1	gi|298674563|ref|YP_003726313.1|	-	0.0003	21.5	2.5	0.0003	21.5	2.5	2.4	2	0	0	2	2	2	1	Bacterial	Ig	domain
FlgD_ig	PF13860.6	gi|298674563|ref|YP_003726313.1|	-	0.0039	17.0	1.5	0.063	13.2	0.1	2.9	2	0	0	2	2	2	1	FlgD	Ig-like	domain
CarbopepD_reg_2	PF13715.6	gi|298674563|ref|YP_003726313.1|	-	0.013	15.5	1.9	1.6	8.8	0.3	3.8	3	1	0	3	3	3	0	CarboxypepD_reg-like	domain
PEGA	PF08308.11	gi|298674563|ref|YP_003726313.1|	-	0.02	14.8	0.8	10	6.1	0.1	2.7	2	0	0	2	2	2	0	PEGA	domain
baeRF_family12	PF18856.1	gi|298674563|ref|YP_003726313.1|	-	3.5	8.2	6.5	14	6.3	1.6	2.5	2	0	0	2	2	2	0	Bacterial	archaeo-eukaryotic	release	factor	family	12
Zot	PF05707.12	gi|298674567|ref|YP_003726317.1|	-	9.6e-06	25.4	0.1	0.00025	20.8	0.0	2.2	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
AAA_16	PF13191.6	gi|298674567|ref|YP_003726317.1|	-	0.0045	17.4	0.0	0.041	14.3	0.0	2.3	3	0	0	3	3	3	1	AAA	ATPase	domain
T2SSE	PF00437.20	gi|298674567|ref|YP_003726317.1|	-	0.046	12.8	0.0	0.072	12.1	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Hydrolase_6	PF13344.6	gi|298674567|ref|YP_003726317.1|	-	0.078	13.1	0.0	1.5	9.0	0.0	2.4	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
AD	PF09793.9	gi|298674567|ref|YP_003726317.1|	-	0.11	12.6	0.0	22	5.2	0.0	2.4	2	0	0	2	2	2	0	Anticodon-binding	domain
Tenui_N	PF05733.11	gi|298674567|ref|YP_003726317.1|	-	0.12	11.9	0.2	0.21	11.1	0.2	1.4	1	0	0	1	1	1	0	Tenuivirus/Phlebovirus	nucleocapsid	protein
Pox_A32	PF04665.12	gi|298674567|ref|YP_003726317.1|	-	0.13	11.7	0.1	0.49	9.8	0.1	2.0	1	1	0	1	1	1	0	Poxvirus	A32	protein
AAA_33	PF13671.6	gi|298674567|ref|YP_003726317.1|	-	0.2	11.8	0.3	0.48	10.6	0.1	1.9	2	1	0	2	2	2	0	AAA	domain
Fe_dep_repress	PF01325.19	gi|298674568|ref|YP_003726318.1|	-	0.00052	20.2	0.4	0.0018	18.5	0.0	2.0	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF3116	PF11313.8	gi|298674568|ref|YP_003726318.1|	-	0.0032	17.3	1.4	0.0054	16.6	0.1	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3116)
HTH_34	PF13601.6	gi|298674568|ref|YP_003726318.1|	-	0.0042	17.2	0.4	0.013	15.6	0.0	1.9	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_36	PF13730.6	gi|298674568|ref|YP_003726318.1|	-	0.0062	16.5	0.4	0.025	14.5	0.0	2.1	2	1	0	2	2	2	1	Helix-turn-helix	domain
HTH_27	PF13463.6	gi|298674568|ref|YP_003726318.1|	-	0.02	15.4	0.0	0.049	14.1	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HxlR	PF01638.17	gi|298674568|ref|YP_003726318.1|	-	0.03	14.2	0.0	0.055	13.3	0.0	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_54	PF18607.1	gi|298674568|ref|YP_003726318.1|	-	0.031	14.3	1.0	0.064	13.3	0.1	2.0	2	0	0	2	2	2	0	ParA	helix	turn	helix	domain
DUF3375	PF11855.8	gi|298674568|ref|YP_003726318.1|	-	0.061	12.2	1.3	0.084	11.8	1.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3375)
DUF4600	PF15372.6	gi|298674568|ref|YP_003726318.1|	-	0.41	11.1	8.7	0.24	11.8	3.5	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4600)
DUF2533	PF10752.9	gi|298674568|ref|YP_003726318.1|	-	1.1	9.7	4.8	7.8	7.0	0.1	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2533)
Pilin_N	PF07790.11	gi|298674569|ref|YP_003726319.1|	-	1.7e-18	67.3	0.9	8.1e-18	65.1	0.1	2.3	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
DUF4065	PF13274.6	gi|298674569|ref|YP_003726319.1|	-	0.017	16.0	0.8	0.069	14.0	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4065)
PEGA	PF08308.11	gi|298674573|ref|YP_003726323.1|	-	1.1e-07	31.6	2.5	1.1e-07	31.6	2.5	2.8	2	0	0	2	2	2	1	PEGA	domain
PGF-CTERM	PF18204.1	gi|298674573|ref|YP_003726323.1|	-	8.9e-07	28.7	5.7	1.4e-06	28.1	5.7	1.3	1	0	0	1	1	1	1	PGF-CTERM	motif
BiPBP_C	PF06832.12	gi|298674573|ref|YP_003726323.1|	-	3.4e-06	27.0	0.0	6.8e-05	22.8	0.0	2.7	3	0	0	3	3	3	1	Penicillin-Binding	Protein	C-terminus	Family
TcfC	PF16967.5	gi|298674573|ref|YP_003726323.1|	-	0.0049	16.3	0.0	0.02	14.4	0.0	2.0	2	0	0	2	2	2	1	E-set	like	domain
PKD_3	PF16820.5	gi|298674573|ref|YP_003726323.1|	-	0.064	13.0	0.4	0.47	10.2	0.1	2.5	2	0	0	2	2	2	0	PKD-like	domain
DUF5104	PF17117.5	gi|298674573|ref|YP_003726323.1|	-	2.6	8.5	6.0	0.45	11.0	1.4	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5104)
PCC_BT	PF18140.1	gi|298674573|ref|YP_003726323.1|	-	7.1	7.0	6.7	8.4	6.8	0.1	3.1	3	1	1	4	4	4	0	Propionyl-coenzyme	A	carboxylase	BT	domain
PCC_BT	PF18140.1	gi|298674574|ref|YP_003726324.1|	-	0.12	12.7	0.0	3.6	7.9	0.0	2.6	2	0	0	2	2	2	0	Propionyl-coenzyme	A	carboxylase	BT	domain
CBM60	PF16841.5	gi|298674574|ref|YP_003726324.1|	-	6.8	7.2	10.9	31	5.1	0.0	4.5	4	1	1	5	5	5	0	Ca-dependent	carbohydrate-binding	module	xylan-binding
DUF2304	PF10066.9	gi|298674576|ref|YP_003726326.1|	-	2.6	8.3	9.1	0.91	9.8	0.2	3.3	3	0	0	3	3	3	0	Uncharacterized	conserved	protein	(DUF2304)
CRCB	PF02537.15	gi|298674576|ref|YP_003726326.1|	-	3.3	8.1	9.8	94	3.4	9.8	2.5	1	1	0	1	1	1	0	CrcB-like	protein,	Camphor	Resistance	(CrcB)
VCBS	PF13517.6	gi|298674578|ref|YP_003726328.1|	-	9.3e-68	224.7	64.9	1.6e-14	54.2	2.4	7.1	1	1	6	7	7	7	7	Repeat	domain	in	Vibrio,	Colwellia,	Bradyrhizobium	and	Shewanella
FG-GAP	PF01839.23	gi|298674578|ref|YP_003726328.1|	-	3.6e-28	97.3	23.8	0.0005	20.1	0.0	7.5	7	0	0	7	7	7	7	FG-GAP	repeat
EF-hand_1	PF00036.32	gi|298674578|ref|YP_003726328.1|	-	7.2e-07	28.3	21.7	0.42	10.3	0.0	8.3	9	0	0	9	9	9	3	EF	hand
BBS2_Mid	PF14783.6	gi|298674578|ref|YP_003726328.1|	-	1.4e-05	25.1	5.5	10	6.2	0.0	6.2	5	2	1	7	7	7	1	Ciliary	BBSome	complex	subunit	2,	middle	region
EF-hand_5	PF13202.6	gi|298674578|ref|YP_003726328.1|	-	7.7e-05	22.0	28.8	1.6	8.4	0.1	7.9	8	0	0	8	8	8	5	EF	hand
PliI	PF16743.5	gi|298674578|ref|YP_003726328.1|	-	0.00023	20.9	6.1	6.2	6.6	0.1	5.9	4	2	3	7	7	7	1	Periplasmic	lysozyme	inhibitor	of	I-type	lysozyme
Phage_pRha	PF09669.10	gi|298674578|ref|YP_003726328.1|	-	0.013	16.0	0.6	7.7	7.1	0.0	3.5	2	2	1	3	3	3	0	Phage	regulatory	protein	Rha	(Phage_pRha)
DUF1391	PF07151.12	gi|298674578|ref|YP_003726328.1|	-	0.095	12.5	6.6	1.4	8.8	0.1	4.0	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1391)
LptF_LptG	PF03739.14	gi|298674578|ref|YP_003726328.1|	-	2.7	6.7	6.4	8.9	5.0	0.9	2.6	2	0	0	2	2	2	0	Lipopolysaccharide	export	system	permease	LptF/LptG
Pilin_N	PF07790.11	gi|298674579|ref|YP_003726329.1|	-	1.2e-16	61.4	3.0	5.5e-16	59.2	1.2	2.1	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
DUF4198	PF10670.9	gi|298674579|ref|YP_003726329.1|	-	0.003	18.0	0.0	0.0039	17.6	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4198)
SL4P	PF17618.2	gi|298674579|ref|YP_003726329.1|	-	0.0068	16.4	0.1	0.013	15.5	0.0	1.7	2	0	0	2	2	2	1	Uncharacterized	Strongylid	L4	protein
DUF3481	PF11980.8	gi|298674579|ref|YP_003726329.1|	-	0.062	13.0	0.0	0.22	11.2	0.0	1.9	2	0	0	2	2	2	0	C-terminal	domain	of	neuropilin	glycoprotein
DUF3290	PF11694.8	gi|298674579|ref|YP_003726329.1|	-	0.085	12.8	0.1	0.56	10.2	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3290)
LYTB	PF02401.18	gi|298674580|ref|YP_003726330.1|	-	0.0089	15.3	0.0	0.011	15.0	0.0	1.1	1	0	0	1	1	1	1	LytB	protein
Pilin_N	PF07790.11	gi|298674580|ref|YP_003726330.1|	-	0.015	16.2	0.9	0.095	13.6	0.7	2.3	1	1	0	1	1	1	0	Archaeal	Type	IV	pilin,	N-terminal
Inhibitor_I71	PF12628.7	gi|298674580|ref|YP_003726330.1|	-	0.15	11.9	2.3	0.12	12.2	1.0	1.5	1	1	0	1	1	1	0	Falstatin,	cysteine	peptidase	inhibitor
H_PPase	PF03030.16	gi|298674581|ref|YP_003726331.1|	-	0.0076	14.9	0.1	0.0091	14.7	0.1	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
PorA	PF11271.8	gi|298674581|ref|YP_003726331.1|	-	0.02	14.2	0.7	2.2	7.5	0.1	2.2	1	1	0	2	2	2	0	Porin	PorA
DUF350	PF03994.14	gi|298674581|ref|YP_003726331.1|	-	9.3	6.5	9.6	8.4	6.6	0.6	2.3	2	1	0	2	2	2	0	Domain	of	Unknown	Function	(DUF350)
Phage_integrase	PF00589.22	gi|298674582|ref|YP_003726332.1|	-	1.1e-06	28.5	0.0	0.00019	21.2	0.0	2.1	2	0	0	2	2	2	2	Phage	integrase	family
NitrOD2	PF18550.1	gi|298674582|ref|YP_003726332.1|	-	0.18	12.0	0.0	0.28	11.3	0.0	1.3	1	0	0	1	1	1	0	Nitrososphaera	output	domain	2
DUF2340	PF10209.9	gi|298674583|ref|YP_003726333.1|	-	0.015	15.8	0.6	0.024	15.1	0.5	1.4	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2340)
Ogr_Delta	PF04606.12	gi|298674585|ref|YP_003726335.1|	-	0.0022	17.9	2.8	0.0034	17.3	2.8	1.3	1	1	0	1	1	1	1	Ogr/Delta-like	zinc	finger
FeS	PF04060.13	gi|298674585|ref|YP_003726335.1|	-	0.059	13.0	0.7	0.059	13.0	0.7	2.1	2	0	0	2	2	2	0	Putative	Fe-S	cluster
CCDC-167	PF15188.6	gi|298674591|ref|YP_003726341.1|	-	0.013	15.8	1.5	0.015	15.7	1.5	1.1	1	0	0	1	1	1	0	Coiled-coil	domain-containing	protein	167
Apolipoprotein	PF01442.18	gi|298674591|ref|YP_003726341.1|	-	0.045	13.6	0.1	0.046	13.6	0.1	1.1	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
DUF2205	PF10224.9	gi|298674591|ref|YP_003726341.1|	-	0.05	13.6	1.1	0.089	12.8	1.1	1.5	1	1	0	1	1	1	0	Short	coiled-coil	protein
DDE_3	PF13358.6	gi|298674592|ref|YP_003726342.1|	-	1.5e-21	76.7	0.1	2e-21	76.3	0.1	1.2	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
DDE_1	PF03184.19	gi|298674592|ref|YP_003726342.1|	-	9.7e-05	22.1	0.1	0.00012	21.8	0.1	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
rve	PF00665.26	gi|298674592|ref|YP_003726342.1|	-	0.00031	20.9	0.0	0.00046	20.4	0.0	1.2	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|298674593|ref|YP_003726343.1|	-	6.8e-11	42.6	0.1	1.3e-10	41.7	0.1	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_23	PF13384.6	gi|298674593|ref|YP_003726343.1|	-	4.7e-08	32.6	0.2	1.5e-07	31.0	0.0	1.9	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_33	PF13592.6	gi|298674593|ref|YP_003726343.1|	-	2.3e-07	30.3	0.3	1.7e-06	27.6	0.1	2.4	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_28	PF13518.6	gi|298674593|ref|YP_003726343.1|	-	7.6e-07	29.2	0.0	2.2e-06	27.7	0.0	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_29	PF13551.6	gi|298674593|ref|YP_003726343.1|	-	8.9e-06	25.6	0.0	1.9e-05	24.6	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn	helix
DUF559	PF04480.12	gi|298674593|ref|YP_003726343.1|	-	0.0027	17.5	0.4	0.0078	16.1	0.1	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF559)
HTH_Tnp_IS630	PF01710.16	gi|298674593|ref|YP_003726343.1|	-	0.0034	17.4	0.7	0.0055	16.7	0.3	1.6	1	1	0	1	1	1	1	Transposase
Tau95	PF09734.9	gi|298674593|ref|YP_003726343.1|	-	0.037	14.8	0.4	0.053	14.3	0.2	1.6	1	1	0	1	1	1	0	RNA	polymerase	III	transcription	factor	(TF)IIIC	subunit	HTH	domain
U3_assoc_6	PF08640.11	gi|298674593|ref|YP_003726343.1|	-	0.53	10.4	5.6	0.52	10.4	0.3	2.8	3	0	0	3	3	3	0	U3	small	nucleolar	RNA-associated	protein	6
DUF2288	PF10052.9	gi|298674594|ref|YP_003726344.1|	-	0.032	14.3	0.0	0.042	13.9	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2288)
AI-2E_transport	PF01594.16	gi|298674595|ref|YP_003726345.1|	-	0.2	10.8	0.0	0.27	10.4	0.0	1.1	1	0	0	1	1	1	0	AI-2E	family	transporter
Radical_SAM	PF04055.21	gi|298674596|ref|YP_003726346.1|	-	4.4e-08	33.7	0.0	5.6e-08	33.3	0.0	1.1	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|298674596|ref|YP_003726346.1|	-	0.025	14.9	0.1	0.047	14.0	0.1	1.4	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|298674596|ref|YP_003726346.1|	-	0.076	13.1	0.0	0.12	12.5	0.0	1.4	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
DUF1848	PF08902.11	gi|298674596|ref|YP_003726346.1|	-	0.085	12.6	5.7	1.8	8.2	6.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
DUF5131	PF07505.11	gi|298674596|ref|YP_003726346.1|	-	0.089	12.2	0.0	0.24	10.9	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF5131)
N6_Mtase	PF02384.16	gi|298674597|ref|YP_003726347.1|	-	4.1e-08	32.8	0.0	6.5e-08	32.2	0.0	1.2	1	0	0	1	1	1	1	N-6	DNA	Methylase
GerE	PF00196.19	gi|298674598|ref|YP_003726348.1|	-	1.7e-07	30.7	0.2	4.4e-07	29.4	0.2	1.8	1	1	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_23	PF13384.6	gi|298674598|ref|YP_003726348.1|	-	6.4e-06	25.8	0.0	1.1e-05	25.1	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_38	PF13936.6	gi|298674598|ref|YP_003726348.1|	-	0.0001	22.0	0.5	0.0007	19.3	0.1	2.0	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|298674598|ref|YP_003726348.1|	-	0.00013	21.9	0.2	0.00018	21.5	0.2	1.4	1	1	0	1	1	1	1	Helix-turn-helix	domain	of	resolvase
HTH_11	PF08279.12	gi|298674598|ref|YP_003726348.1|	-	0.00049	20.0	0.1	0.00076	19.4	0.1	1.3	1	0	0	1	1	1	1	HTH	domain
Phage_terminase	PF10668.9	gi|298674598|ref|YP_003726348.1|	-	0.0015	18.5	0.2	0.003	17.5	0.2	1.5	1	1	1	2	2	2	1	Phage	terminase	small	subunit
HTH_29	PF13551.6	gi|298674598|ref|YP_003726348.1|	-	0.0028	17.6	0.0	0.0045	17.0	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_28	PF13518.6	gi|298674598|ref|YP_003726348.1|	-	0.0046	17.0	0.0	0.007	16.5	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|298674598|ref|YP_003726348.1|	-	0.0049	16.5	0.0	0.0077	15.9	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_40	PF14493.6	gi|298674598|ref|YP_003726348.1|	-	0.0052	17.2	0.1	0.009	16.4	0.0	1.4	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|298674598|ref|YP_003726348.1|	-	0.014	15.0	0.0	0.02	14.4	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
TnsD	PF15978.5	gi|298674598|ref|YP_003726348.1|	-	0.017	14.1	0.0	0.017	14.1	0.0	1.1	1	0	0	1	1	1	0	Tn7-like	transposition	protein	D
Terminase_5	PF06056.12	gi|298674598|ref|YP_003726348.1|	-	0.019	14.8	0.5	0.17	11.8	0.0	2.2	2	1	0	2	2	2	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_3	PF01381.22	gi|298674598|ref|YP_003726348.1|	-	0.029	14.4	0.2	0.056	13.5	0.2	1.5	1	0	0	1	1	1	0	Helix-turn-helix
Sigma70_ECF	PF07638.11	gi|298674598|ref|YP_003726348.1|	-	0.055	13.4	0.0	0.057	13.3	0.0	1.2	1	0	0	1	1	1	0	ECF	sigma	factor
Trp_repressor	PF01371.19	gi|298674598|ref|YP_003726348.1|	-	0.062	13.4	0.2	0.095	12.8	0.2	1.6	1	1	0	1	1	1	0	Trp	repressor	protein
HTH_36	PF13730.6	gi|298674598|ref|YP_003726348.1|	-	0.083	12.9	0.0	0.1	12.6	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.6	gi|298674598|ref|YP_003726348.1|	-	0.2	11.1	0.0	0.24	10.8	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
DUF2794	PF10984.8	gi|298674599|ref|YP_003726349.1|	-	0.13	12.4	0.0	0.2	11.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2794)
MCM	PF00493.23	gi|298674601|ref|YP_003726351.1|	-	2.8e-84	281.7	0.0	4.1e-84	281.2	0.0	1.2	1	0	0	1	1	1	1	MCM	P-loop	domain
MCM_OB	PF17207.3	gi|298674601|ref|YP_003726351.1|	-	7.3e-31	106.6	1.4	1.2e-30	106.0	1.4	1.3	1	0	0	1	1	1	1	MCM	OB	domain
MCM_lid	PF17855.1	gi|298674601|ref|YP_003726351.1|	-	6.5e-27	93.8	0.0	2e-26	92.2	0.0	1.9	1	0	0	1	1	1	1	MCM	AAA-lid	domain
Mg_chelatase	PF01078.21	gi|298674601|ref|YP_003726351.1|	-	0.0008	18.9	0.0	0.0019	17.6	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
EAP30	PF04157.16	gi|298674601|ref|YP_003726351.1|	-	0.005	16.2	0.1	0.011	15.0	0.1	1.6	1	0	0	1	1	1	1	EAP30/Vps36	family
AAA_5	PF07728.14	gi|298674601|ref|YP_003726351.1|	-	0.14	12.1	0.0	0.4	10.7	0.0	1.9	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
GPAT_N	PF14829.6	gi|298674602|ref|YP_003726352.1|	-	0.0038	17.2	0.0	0.009	16.0	0.0	2.0	1	1	0	1	1	1	1	Glycerol-3-phosphate	acyltransferase	N-terminal
DUF3458_C	PF17432.2	gi|298674602|ref|YP_003726352.1|	-	0.0072	15.7	0.1	0.0082	15.6	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3458_C)	ARM	repeats
Zn_Tnp_IS1595	PF12760.7	gi|298674605|ref|YP_003726355.1|	-	0.0025	17.7	4.6	0.0039	17.1	4.6	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.16	gi|298674605|ref|YP_003726355.1|	-	0.0076	16.2	0.9	0.017	15.1	0.9	1.7	1	1	0	1	1	1	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn-ribbon_8	PF09723.10	gi|298674605|ref|YP_003726355.1|	-	0.009	16.1	4.4	0.099	12.8	0.5	2.2	2	0	0	2	2	2	2	Zinc	ribbon	domain
TackOD1	PF18551.1	gi|298674605|ref|YP_003726355.1|	-	0.011	15.4	1.4	0.013	15.1	1.4	1.1	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
TF_Zn_Ribbon	PF08271.12	gi|298674605|ref|YP_003726355.1|	-	0.014	14.9	4.5	0.02	14.4	4.5	1.2	1	0	0	1	1	1	0	TFIIB	zinc-binding
zf-H2C2_2	PF13465.6	gi|298674605|ref|YP_003726355.1|	-	0.33	11.5	2.4	7.5	7.2	0.7	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674607|ref|YP_003726357.1|	-	0.083	12.9	10.1	0.1	12.6	10.1	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
zf-H2C2_2	PF13465.6	gi|298674610|ref|YP_003726360.1|	-	0.02	15.3	1.0	5.5	7.6	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
DNA_RNApol_7kD	PF03604.13	gi|298674610|ref|YP_003726360.1|	-	0.035	13.8	0.5	0.37	10.5	0.1	2.1	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
HypA	PF01155.19	gi|298674610|ref|YP_003726360.1|	-	0.037	14.1	0.3	0.041	13.9	0.3	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-ribbon_3	PF13248.6	gi|298674610|ref|YP_003726360.1|	-	0.36	10.3	4.3	0.91	9.0	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674610|ref|YP_003726360.1|	-	3.2	7.8	6.0	5.3	7.1	0.2	2.5	1	1	2	3	3	3	0	Transposase	zinc-ribbon	domain
PhaP_Bmeg	PF09602.10	gi|298674611|ref|YP_003726361.1|	-	0.04	13.8	0.4	0.047	13.6	0.4	1.0	1	0	0	1	1	1	0	Polyhydroxyalkanoic	acid	inclusion	protein	(PhaP_Bmeg)
RHH_8	PF17723.1	gi|298674613|ref|YP_003726363.1|	-	7.5e-05	22.9	0.0	8.2e-05	22.8	0.0	1.1	1	0	0	1	1	1	1	Ribbon-Helix-Helix	transcriptional	regulator	family
PhoU	PF01895.19	gi|298674614|ref|YP_003726364.1|	-	0.021	15.2	0.2	0.029	14.8	0.2	1.3	1	0	0	1	1	1	0	PhoU	domain
ScsC_N	PF18312.1	gi|298674614|ref|YP_003726364.1|	-	0.046	13.5	0.7	0.094	12.5	0.7	1.6	1	0	0	1	1	1	0	Copper	resistance	protein	ScsC	N-terminal	domain
Ectatomin	PF06457.11	gi|298674614|ref|YP_003726364.1|	-	0.067	13.1	0.1	0.14	12.1	0.1	1.6	1	0	0	1	1	1	0	Ectatomin
Lar_restr_allev	PF14354.6	gi|298674615|ref|YP_003726365.1|	-	0.021	15.2	0.1	0.052	13.9	0.1	1.6	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
OKR_DC_1_C	PF03711.15	gi|298674615|ref|YP_003726365.1|	-	0.055	13.8	0.1	0.082	13.2	0.1	1.3	1	0	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	C-terminal	domain
DUF1828	PF08861.10	gi|298674617|ref|YP_003726367.1|	-	2.1e-25	88.8	1.8	2.2e-25	88.8	0.3	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF1828
AbiTii	PF18864.1	gi|298674618|ref|YP_003726368.1|	-	1.3e-15	58.1	1.7	1.2e-14	54.9	1.7	2.2	1	1	0	1	1	1	1	AbiTii
NERD	PF08378.11	gi|298674619|ref|YP_003726369.1|	-	0.00043	20.7	0.2	0.0012	19.2	0.2	1.9	1	0	0	1	1	1	1	Nuclease-related	domain
AAA_assoc_C	PF09821.9	gi|298674620|ref|YP_003726370.1|	-	3.7e-05	24.3	0.0	8e-05	23.2	0.0	1.5	1	0	0	1	1	1	1	C-terminal	AAA-associated	domain
MethyltransfD12	PF02086.15	gi|298674621|ref|YP_003726371.1|	-	9.3e-59	199.2	6.8	1.1e-58	199.0	6.8	1.0	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
LuxQ-periplasm	PF09308.10	gi|298674621|ref|YP_003726371.1|	-	0.09	12.3	0.2	0.15	11.6	0.2	1.3	1	0	0	1	1	1	0	LuxQ,	periplasmic
DUF1493	PF07377.12	gi|298674621|ref|YP_003726371.1|	-	0.3	11.6	2.0	2.9	8.4	0.1	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1493)
DUF3898	PF13037.6	gi|298674623|ref|YP_003726373.1|	-	0.085	13.0	0.1	0.52	10.4	0.1	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3898)
DUF1699	PF08004.11	gi|298674625|ref|YP_003726375.1|	-	5.4e-60	200.8	1.0	6e-60	200.6	1.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1699)
HIGH_NTase1	PF05636.11	gi|298674625|ref|YP_003726375.1|	-	0.023	13.9	0.1	0.31	10.2	0.0	1.9	1	1	1	2	2	2	0	HIGH	Nucleotidyl	Transferase
FtsX	PF02687.21	gi|298674626|ref|YP_003726376.1|	-	1e-07	32.3	4.9	1e-07	32.3	4.9	2.9	3	0	0	3	3	3	1	FtsX-like	permease	family
OrfB_IS605	PF01385.19	gi|298674627|ref|YP_003726377.1|	-	5.8e-27	94.3	1.9	1.3e-26	93.2	1.9	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674627|ref|YP_003726377.1|	-	1.7e-23	82.3	0.3	3.6e-23	81.3	0.3	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298674627|ref|YP_003726377.1|	-	4.3e-20	70.9	1.4	9.3e-20	69.8	1.4	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298674627|ref|YP_003726377.1|	-	0.012	15.8	0.3	0.03	14.5	0.3	1.7	1	0	0	1	1	1	0	Piccolo	Zn-finger
Phage_GP20	PF06810.11	gi|298674627|ref|YP_003726377.1|	-	0.019	14.7	4.5	0.29	10.9	1.7	2.4	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
LemA	PF04011.12	gi|298674627|ref|YP_003726377.1|	-	0.039	13.8	1.1	0.32	10.8	0.1	2.3	2	0	0	2	2	2	0	LemA	family
MapZ_EC1	PF18041.1	gi|298674627|ref|YP_003726377.1|	-	0.51	10.6	6.7	0.21	11.8	1.3	2.3	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
Cupin_2	PF07883.11	gi|298674628|ref|YP_003726378.1|	-	3.1e-14	52.4	0.2	4.4e-14	51.9	0.2	1.2	1	0	0	1	1	1	1	Cupin	domain
MannoseP_isomer	PF01050.18	gi|298674628|ref|YP_003726378.1|	-	9.9e-05	22.3	0.1	0.00011	22.1	0.1	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
AraC_binding	PF02311.19	gi|298674628|ref|YP_003726378.1|	-	0.005	16.7	0.0	0.0058	16.5	0.0	1.1	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Pirin_C	PF05726.13	gi|298674628|ref|YP_003726378.1|	-	0.0056	17.0	0.0	0.0071	16.7	0.0	1.1	1	0	0	1	1	1	1	Pirin	C-terminal	cupin	domain
Cupin_1	PF00190.22	gi|298674628|ref|YP_003726378.1|	-	0.009	15.6	0.0	0.015	14.9	0.0	1.5	1	1	0	1	1	1	1	Cupin
DUF4585	PF15232.6	gi|298674628|ref|YP_003726378.1|	-	0.033	14.2	0.0	0.18	11.8	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4585)
Prismane	PF03063.20	gi|298674629|ref|YP_003726379.1|	-	2.9e-180	600.3	0.0	3.5e-180	600.1	0.0	1.0	1	0	0	1	1	1	1	Prismane/CO	dehydrogenase	family
PHtD_u1	PF16645.5	gi|298674629|ref|YP_003726379.1|	-	0.16	12.4	0.2	0.43	11.0	0.2	1.7	1	0	0	1	1	1	0	Unstructured	region	on	Pneumococcal	histidine	triad	protein
HxlR	PF01638.17	gi|298674630|ref|YP_003726380.1|	-	1.9e-23	82.1	0.6	2.4e-23	81.8	0.6	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
PadR	PF03551.14	gi|298674630|ref|YP_003726380.1|	-	0.00029	20.7	0.1	0.00049	20.0	0.1	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF2513	PF10711.9	gi|298674630|ref|YP_003726380.1|	-	0.00097	19.4	0.3	0.0027	18.0	0.3	1.6	1	1	1	2	2	2	1	Hypothetical	protein	(DUF2513)
MarR	PF01047.22	gi|298674630|ref|YP_003726380.1|	-	0.003	17.4	0.1	0.0044	16.9	0.1	1.3	1	0	0	1	1	1	1	MarR	family
DUF505	PF04458.12	gi|298674630|ref|YP_003726380.1|	-	0.0038	15.7	0.2	0.0043	15.5	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
HTH_34	PF13601.6	gi|298674630|ref|YP_003726380.1|	-	0.0049	17.0	0.1	0.0087	16.2	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.6	gi|298674630|ref|YP_003726380.1|	-	0.007	15.9	0.0	0.013	15.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_12	PF08461.10	gi|298674630|ref|YP_003726380.1|	-	0.014	15.4	0.0	0.022	14.7	0.0	1.4	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
DUF4423	PF14394.6	gi|298674630|ref|YP_003726380.1|	-	0.014	15.2	0.1	0.018	14.8	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
MarR_2	PF12802.7	gi|298674630|ref|YP_003726380.1|	-	0.023	14.6	0.0	0.029	14.2	0.0	1.2	1	0	0	1	1	1	0	MarR	family
HTH_20	PF12840.7	gi|298674630|ref|YP_003726380.1|	-	0.035	14.2	0.0	0.05	13.7	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.20	gi|298674630|ref|YP_003726380.1|	-	0.041	14.2	0.0	0.06	13.7	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_45	PF14947.6	gi|298674630|ref|YP_003726380.1|	-	0.044	13.8	0.2	0.11	12.5	0.2	1.7	1	1	0	1	1	1	0	Winged	helix-turn-helix
Replic_Relax	PF13814.6	gi|298674630|ref|YP_003726380.1|	-	0.085	12.9	0.0	0.099	12.7	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
HTH_Crp_2	PF13545.6	gi|298674630|ref|YP_003726380.1|	-	0.11	12.4	0.0	0.18	11.8	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
ATP_bind_3	PF01171.20	gi|298674631|ref|YP_003726381.1|	-	5.9e-15	55.5	0.0	9.1e-15	54.9	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
PAPS_reduct	PF01507.19	gi|298674631|ref|YP_003726381.1|	-	0.00028	21.0	0.0	0.00055	20.0	0.0	1.4	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
NAD_synthase	PF02540.17	gi|298674631|ref|YP_003726381.1|	-	0.00057	19.1	0.0	0.00078	18.6	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|298674631|ref|YP_003726381.1|	-	0.0025	16.7	0.0	0.0036	16.1	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
zn-ribbon_14	PF16503.5	gi|298674631|ref|YP_003726381.1|	-	0.01	15.3	7.1	0.01	15.3	7.1	3.0	3	0	0	3	3	3	0	Zinc-ribbon
Asn_synthase	PF00733.21	gi|298674631|ref|YP_003726381.1|	-	0.065	12.9	0.0	0.11	12.1	0.0	1.3	1	0	0	1	1	1	0	Asparagine	synthase
RecR	PF02132.15	gi|298674631|ref|YP_003726381.1|	-	0.91	9.1	10.6	0.32	10.6	4.3	2.9	3	0	0	3	3	3	0	RecR	protein
TctA	PF01970.16	gi|298674632|ref|YP_003726382.1|	-	1.2e-74	251.5	38.1	1.4e-74	251.3	38.1	1.0	1	0	0	1	1	1	1	Tripartite	tricarboxylate	transporter	TctA	family
Trm56	PF01994.16	gi|298674633|ref|YP_003726383.1|	-	3.6e-48	162.4	0.1	4.4e-48	162.1	0.1	1.1	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
SpoU_methylase	PF00588.19	gi|298674633|ref|YP_003726383.1|	-	0.0017	18.5	0.0	0.0024	18.0	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Glycos_trans_3N	PF02885.17	gi|298674634|ref|YP_003726384.1|	-	2.8e-16	59.1	0.1	6.2e-16	58.0	0.1	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
PYNP_C	PF07831.13	gi|298674634|ref|YP_003726384.1|	-	1.5e-12	47.0	0.6	8.9e-12	44.5	0.1	2.4	2	0	0	2	2	2	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
Glycos_transf_3	PF00591.21	gi|298674634|ref|YP_003726384.1|	-	6.7e-12	45.5	1.3	7.7e-11	42.1	1.3	2.2	1	1	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Molydop_binding	PF01568.21	gi|298674634|ref|YP_003726384.1|	-	1.5e-05	25.0	0.1	4.5e-05	23.5	0.0	1.7	2	0	0	2	2	2	1	Molydopterin	dinucleotide	binding	domain
CDC48_N	PF02359.18	gi|298674634|ref|YP_003726384.1|	-	0.02	15.0	0.1	0.043	14.0	0.1	1.6	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
DUF2254	PF10011.9	gi|298674634|ref|YP_003726384.1|	-	0.03	13.2	0.0	0.044	12.6	0.0	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2254)
Biotin_lipoyl	PF00364.22	gi|298674634|ref|YP_003726384.1|	-	0.28	11.0	2.4	0.68	9.8	0.1	2.9	3	0	0	3	3	3	0	Biotin-requiring	enzyme
FrhB_FdhB_C	PF04432.13	gi|298674635|ref|YP_003726385.1|	-	1.1e-36	126.0	0.0	2.9e-36	124.6	0.0	1.7	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
NIR_SIR	PF01077.22	gi|298674635|ref|YP_003726385.1|	-	1.2e-29	102.8	0.1	2.2e-29	102.0	0.1	1.4	1	0	0	1	1	1	1	Nitrite	and	sulphite	reductase	4Fe-4S	domain
FrhB_FdhB_N	PF04422.13	gi|298674635|ref|YP_003726385.1|	-	7.6e-16	58.0	0.0	1.5e-15	57.0	0.0	1.5	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4	PF00037.27	gi|298674635|ref|YP_003726385.1|	-	2.2e-11	43.0	46.9	1.9e-06	27.4	4.2	5.1	6	0	0	6	6	4	3	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674635|ref|YP_003726385.1|	-	5.3e-10	39.7	26.7	0.00023	21.7	0.4	4.4	3	2	1	4	4	4	4	4Fe-4S	dicluster	domain
NIR_SIR_ferr	PF03460.17	gi|298674635|ref|YP_003726385.1|	-	1.5e-09	37.6	0.0	4.2e-09	36.1	0.0	1.8	2	0	0	2	2	1	1	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
Fer4_10	PF13237.6	gi|298674635|ref|YP_003726385.1|	-	3.1e-09	36.8	27.0	8e-05	22.7	1.3	4.0	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298674635|ref|YP_003726385.1|	-	2.5e-08	33.9	27.6	0.0054	16.8	5.0	3.6	2	1	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674635|ref|YP_003726385.1|	-	3.6e-08	33.0	37.8	0.00076	19.4	3.0	5.6	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298674635|ref|YP_003726385.1|	-	6.2e-08	32.7	29.7	7.5e-07	29.2	11.4	3.6	2	2	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674635|ref|YP_003726385.1|	-	2e-07	31.9	28.6	0.0061	17.5	0.5	5.8	5	1	0	5	5	5	3	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|298674635|ref|YP_003726385.1|	-	7.4e-07	29.0	37.8	0.00074	19.5	3.2	5.1	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298674635|ref|YP_003726385.1|	-	1.2e-06	28.8	18.4	0.11	12.9	0.2	4.6	3	1	2	5	5	5	3	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298674635|ref|YP_003726385.1|	-	5.2e-06	26.6	35.5	0.0026	18.1	1.7	6.0	6	0	0	6	6	6	3	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|298674635|ref|YP_003726385.1|	-	9e-05	22.6	14.6	0.013	15.7	4.4	2.7	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298674635|ref|YP_003726385.1|	-	0.00012	22.6	26.1	0.061	13.9	1.8	4.8	3	1	2	5	5	5	3	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298674635|ref|YP_003726385.1|	-	0.00091	20.0	23.4	0.041	14.7	1.6	4.2	4	0	0	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298674635|ref|YP_003726385.1|	-	0.014	16.3	4.4	0.014	16.3	4.4	5.4	6	0	0	6	6	4	0	4Fe-4S	binding	domain
DUF237	PF03072.14	gi|298674635|ref|YP_003726385.1|	-	0.15	12.1	0.1	0.32	11.0	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF237)
Fer4_13	PF13370.6	gi|298674635|ref|YP_003726385.1|	-	1	9.9	27.4	0.22	12.1	0.3	5.3	5	0	0	5	5	5	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
PDT	PF00800.18	gi|298674636|ref|YP_003726386.1|	-	2.6e-58	196.8	0.1	3.5e-58	196.4	0.1	1.2	1	0	0	1	1	1	1	Prephenate	dehydratase
ACT	PF01842.25	gi|298674636|ref|YP_003726386.1|	-	2.7e-09	36.6	0.0	4.5e-09	35.9	0.0	1.4	1	0	0	1	1	1	1	ACT	domain
OAM_dimer	PF16554.5	gi|298674636|ref|YP_003726386.1|	-	0.0011	19.4	0.0	0.52	10.8	0.0	2.4	2	0	0	2	2	2	2	Dimerisation	domain	of	d-ornithine	4,5-aminomutase
ACT_4	PF13291.6	gi|298674636|ref|YP_003726386.1|	-	0.0023	18.5	0.0	0.0047	17.5	0.0	1.5	1	0	0	1	1	1	1	ACT	domain
MFS_1	PF07690.16	gi|298674637|ref|YP_003726387.1|	-	0.055	12.4	2.8	0.034	13.1	1.1	1.4	2	0	0	2	2	2	0	Major	Facilitator	Superfamily
DUF5337	PF17272.2	gi|298674637|ref|YP_003726387.1|	-	0.22	11.4	1.9	0.25	11.2	0.2	2.0	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5337)
TMEM43	PF07787.12	gi|298674637|ref|YP_003726387.1|	-	4.6	6.5	8.9	0.2	11.0	2.9	1.8	3	0	0	3	3	3	0	Transmembrane	protein	43
AAA_3	PF07726.11	gi|298674638|ref|YP_003726388.1|	-	1.4e-62	209.4	0.1	2.2e-62	208.7	0.1	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_2	PF17863.1	gi|298674638|ref|YP_003726388.1|	-	1.9e-17	62.8	0.0	3.4e-17	62.0	0.0	1.4	1	0	0	1	1	1	1	AAA	lid	domain
AAA_5	PF07728.14	gi|298674638|ref|YP_003726388.1|	-	2.8e-10	40.4	0.0	1.3e-09	38.2	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|298674638|ref|YP_003726388.1|	-	1.3e-05	25.6	0.2	4e-05	24.0	0.0	2.0	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MCM	PF00493.23	gi|298674638|ref|YP_003726388.1|	-	0.0018	17.4	0.0	0.0031	16.6	0.0	1.4	1	0	0	1	1	1	1	MCM	P-loop	domain
Sigma54_activat	PF00158.26	gi|298674638|ref|YP_003726388.1|	-	0.0038	17.0	0.1	0.027	14.2	0.1	2.1	1	1	0	1	1	1	1	Sigma-54	interaction	domain
Mg_chelatase	PF01078.21	gi|298674638|ref|YP_003726388.1|	-	0.024	14.0	0.1	0.6	9.5	0.0	2.2	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.6	gi|298674638|ref|YP_003726388.1|	-	0.033	14.5	0.7	2	8.7	0.1	2.6	2	1	1	3	3	3	0	AAA	domain
DUF58	PF01882.18	gi|298674639|ref|YP_003726389.1|	-	6.6e-21	74.4	0.0	1.2e-20	73.5	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
VWA_2	PF13519.6	gi|298674639|ref|YP_003726389.1|	-	1.2e-05	25.9	0.0	2.2e-05	25.0	0.0	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.14	gi|298674639|ref|YP_003726389.1|	-	0.0018	17.7	0.1	0.0052	16.2	0.1	1.7	1	1	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
VWA	PF00092.28	gi|298674639|ref|YP_003726389.1|	-	0.037	14.3	0.1	0.082	13.2	0.1	1.6	1	0	0	1	1	1	0	von	Willebrand	factor	type	A	domain
BatA	PF07584.11	gi|298674640|ref|YP_003726390.1|	-	5.2e-15	55.6	4.4	5.2e-15	55.6	4.4	2.3	2	0	0	2	2	2	1	Aerotolerance	regulator	N-terminal
VWA_2	PF13519.6	gi|298674640|ref|YP_003726390.1|	-	2.5e-05	24.9	1.1	0.00012	22.7	0.7	2.4	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
ABC_transp_aux	PF09822.9	gi|298674640|ref|YP_003726390.1|	-	0.0013	18.2	1.1	0.015	14.8	1.2	2.2	1	1	0	1	1	1	1	ABC-type	uncharacterized	transport	system
DUF4350	PF14258.6	gi|298674640|ref|YP_003726390.1|	-	0.089	13.2	0.6	7	7.2	0.0	3.8	4	1	1	5	5	5	0	Domain	of	unknown	function	(DUF4350)
VWA	PF00092.28	gi|298674641|ref|YP_003726391.1|	-	1e-11	45.4	4.4	2.8e-09	37.5	0.5	2.9	2	1	0	2	2	2	2	von	Willebrand	factor	type	A	domain
VWA_2	PF13519.6	gi|298674641|ref|YP_003726391.1|	-	2.4e-10	41.0	0.2	2.7e-09	37.6	0.0	2.6	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
GATase1_like	PF07090.11	gi|298674641|ref|YP_003726391.1|	-	6.4e-06	25.8	0.1	0.014	14.9	0.0	2.2	2	0	0	2	2	2	2	Putative	glutamine	amidotransferase
VWA_CoxE	PF05762.14	gi|298674641|ref|YP_003726391.1|	-	0.00026	20.4	0.0	0.0083	15.5	0.0	2.8	3	0	0	3	3	3	1	VWA	domain	containing	CoxE-like	protein
VWA_3	PF13768.6	gi|298674641|ref|YP_003726391.1|	-	0.015	15.2	0.0	0.14	12.1	0.0	2.3	2	0	0	2	2	2	0	von	Willebrand	factor	type	A	domain
DJ-1_PfpI	PF01965.24	gi|298674642|ref|YP_003726392.1|	-	9.8e-59	197.8	0.0	1.1e-58	197.7	0.0	1.0	1	0	0	1	1	1	1	DJ-1/PfpI	family
GATase	PF00117.28	gi|298674642|ref|YP_003726392.1|	-	3e-05	23.9	0.0	4e-05	23.5	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Catalase_C	PF18011.1	gi|298674642|ref|YP_003726392.1|	-	0.0074	15.9	0.0	0.011	15.4	0.0	1.3	1	0	0	1	1	1	1	C-terminal	domain	found	in	long	catalases
GATase_5	PF13507.6	gi|298674642|ref|YP_003726392.1|	-	0.032	13.3	0.0	0.046	12.8	0.0	1.3	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_C26	PF07722.13	gi|298674642|ref|YP_003726392.1|	-	0.036	13.8	0.0	0.053	13.3	0.0	1.2	1	0	0	1	1	1	0	Peptidase	C26
ThiJ_like	PF17124.5	gi|298674642|ref|YP_003726392.1|	-	0.044	13.5	0.0	4.4	6.9	0.0	2.4	1	1	1	2	2	2	0	ThiJ/PfpI	family-like
GATase_3	PF07685.14	gi|298674642|ref|YP_003726392.1|	-	0.046	13.3	0.0	0.065	12.8	0.0	1.2	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
Arc_PepC_II	PF06847.11	gi|298674644|ref|YP_003726394.1|	-	2.8e-31	107.9	0.0	2.8e-31	107.9	0.0	2.1	2	1	0	2	2	2	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Peptidase_A24	PF01478.18	gi|298674644|ref|YP_003726394.1|	-	2.8e-15	56.6	6.4	2.8e-15	56.6	6.4	1.7	2	1	0	2	2	2	1	Type	IV	leader	peptidase	family
RraA-like	PF03737.15	gi|298674645|ref|YP_003726395.1|	-	4.2e-42	143.8	2.5	4.2e-42	143.8	2.5	1.8	2	0	0	2	2	2	1	Aldolase/RraA
OMPdecase	PF00215.24	gi|298674645|ref|YP_003726395.1|	-	5.1e-20	72.0	3.1	2e-19	70.1	3.1	1.9	1	1	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
NanE	PF04131.14	gi|298674645|ref|YP_003726395.1|	-	4.3e-08	32.6	4.6	8.7e-08	31.6	1.3	2.8	2	1	0	3	3	3	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
His_biosynth	PF00977.21	gi|298674645|ref|YP_003726395.1|	-	3.4e-07	30.0	0.7	2.3e-05	24.0	0.4	2.4	1	1	1	2	2	2	1	Histidine	biosynthesis	protein
TMP-TENI	PF02581.17	gi|298674645|ref|YP_003726395.1|	-	1.2e-05	24.7	1.2	7.3e-05	22.2	1.2	2.4	1	1	0	1	1	1	1	Thiamine	monophosphate	synthase
HMGL-like	PF00682.19	gi|298674645|ref|YP_003726395.1|	-	0.00041	20.0	0.2	0.11	12.1	0.0	2.3	1	1	1	2	2	2	2	HMGL-like
PcrB	PF01884.17	gi|298674645|ref|YP_003726395.1|	-	0.00054	19.5	6.2	0.1	12.0	0.3	2.8	2	1	0	3	3	3	2	PcrB	family
ThiG	PF05690.14	gi|298674645|ref|YP_003726395.1|	-	0.0008	18.8	0.4	0.0022	17.4	0.1	1.8	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.17	gi|298674645|ref|YP_003726395.1|	-	0.0025	17.0	0.4	0.011	14.9	0.1	2.0	1	1	1	2	2	2	1	Dihydrouridine	synthase	(Dus)
Trp_syntA	PF00290.20	gi|298674645|ref|YP_003726395.1|	-	0.0043	15.9	3.2	0.036	12.9	0.9	2.5	2	1	0	2	2	2	1	Tryptophan	synthase	alpha	chain
PEP_mutase	PF13714.6	gi|298674645|ref|YP_003726395.1|	-	0.0059	16.1	0.2	0.7	9.3	0.0	2.3	1	1	1	2	2	2	2	Phosphoenolpyruvate	phosphomutase
DeoC	PF01791.9	gi|298674645|ref|YP_003726395.1|	-	0.0091	15.6	0.1	0.058	13.0	0.1	2.0	1	1	1	2	2	2	1	DeoC/LacD	family	aldolase
NMO	PF03060.15	gi|298674645|ref|YP_003726395.1|	-	0.0094	15.4	2.2	0.026	13.9	2.2	1.7	1	1	0	1	1	1	1	Nitronate	monooxygenase
IGPS	PF00218.21	gi|298674645|ref|YP_003726395.1|	-	0.041	13.0	0.3	0.065	12.4	0.3	1.3	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
DUF561	PF04481.12	gi|298674645|ref|YP_003726395.1|	-	0.46	9.6	5.1	0.65	9.1	0.4	2.9	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF561)
LDcluster4	PF18306.1	gi|298674646|ref|YP_003726396.1|	-	5.5e-45	152.8	2.0	6.3e-45	152.6	2.0	1.0	1	0	0	1	1	1	1	SLOG	cluster4	family
Lysine_decarbox	PF03641.14	gi|298674646|ref|YP_003726396.1|	-	3.1e-08	33.8	0.1	4.5e-08	33.3	0.1	1.2	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
DNA_processg_A	PF02481.15	gi|298674646|ref|YP_003726396.1|	-	4.1e-06	26.2	2.2	0.00044	19.5	0.6	2.0	1	1	1	2	2	2	2	DNA	recombination-mediator	protein	A
LSDAT_prok	PF18171.1	gi|298674646|ref|YP_003726396.1|	-	0.027	13.7	0.1	0.045	13.0	0.1	1.4	1	1	0	1	1	1	0	SLOG	in	TRPM,	prokaryote
DAGK_cat	PF00781.24	gi|298674646|ref|YP_003726396.1|	-	0.12	12.0	0.7	3	7.5	0.0	2.3	2	1	0	2	2	2	0	Diacylglycerol	kinase	catalytic	domain
Topoisom_bac	PF01131.20	gi|298674647|ref|YP_003726397.1|	-	3.8e-131	437.9	0.1	5.5e-131	437.4	0.1	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.22	gi|298674647|ref|YP_003726397.1|	-	3.2e-15	56.2	2.0	7.9e-15	54.9	1.4	2.0	2	0	0	2	2	2	1	Toprim	domain
zf-C4_Topoisom	PF01396.19	gi|298674647|ref|YP_003726397.1|	-	4.7e-14	51.9	1.1	4.7e-14	51.9	1.1	2.3	2	0	0	2	2	2	1	Topoisomerase	DNA	binding	C4	zinc	finger
HHH_5	PF14520.6	gi|298674647|ref|YP_003726397.1|	-	5.1e-08	33.4	0.0	1.9e-07	31.6	0.0	2.0	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
DUF4332	PF14229.6	gi|298674647|ref|YP_003726397.1|	-	0.00036	20.8	0.0	0.00092	19.4	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4332)
Cdd1	PF11731.8	gi|298674647|ref|YP_003726397.1|	-	0.00042	20.5	0.0	0.0012	19.0	0.0	1.8	1	0	0	1	1	1	1	Pathogenicity	locus
DNA_pol_lambd_f	PF10391.9	gi|298674647|ref|YP_003726397.1|	-	0.00046	20.0	0.0	0.0011	18.7	0.0	1.7	1	0	0	1	1	1	1	Fingers	domain	of	DNA	polymerase	lambda
IMS_HHH	PF11798.8	gi|298674647|ref|YP_003726397.1|	-	0.00099	19.3	0.0	0.0025	18.1	0.0	1.7	1	0	0	1	1	1	1	IMS	family	HHH	motif
BAF	PF02961.14	gi|298674647|ref|YP_003726397.1|	-	0.03	14.7	0.0	0.096	13.1	0.0	1.9	1	0	0	1	1	1	0	Barrier	to	autointegration	factor
OMS28_porin	PF03532.13	gi|298674647|ref|YP_003726397.1|	-	0.031	13.5	0.2	0.031	13.5	0.2	2.6	4	0	0	4	4	4	0	OMS28	porin
HHH	PF00633.23	gi|298674647|ref|YP_003726397.1|	-	0.15	12.0	0.0	0.43	10.5	0.0	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
hnRNP_Q_AcD	PF18360.1	gi|298674647|ref|YP_003726397.1|	-	1.2	9.1	3.4	5.2	7.1	0.0	3.1	3	0	0	3	3	3	0	Heterogeneous	nuclear	ribonucleoprotein	Q	acidic	domain
Homeobox_KN	PF05920.11	gi|298674647|ref|YP_003726397.1|	-	4.4	7.3	7.0	0.35	10.8	0.2	2.6	3	0	0	3	3	3	0	Homeobox	KN	domain
RMMBL	PF07521.12	gi|298674648|ref|YP_003726398.1|	-	2.5e-13	49.7	0.0	2.7e-09	36.8	0.0	2.7	2	0	0	2	2	2	2	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Beta-Casp	PF10996.8	gi|298674648|ref|YP_003726398.1|	-	2.5e-12	47.0	0.0	5.9e-12	45.9	0.0	1.6	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B_2	PF12706.7	gi|298674648|ref|YP_003726398.1|	-	2.6e-09	36.9	0.0	4.4e-09	36.1	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|298674648|ref|YP_003726398.1|	-	1.2e-07	31.9	0.4	5.6e-07	29.8	0.4	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_6	PF16661.5	gi|298674648|ref|YP_003726398.1|	-	1.2e-06	28.1	0.0	4.1e-06	26.4	0.0	1.8	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|298674648|ref|YP_003726398.1|	-	4.4e-05	23.4	0.1	0.00011	22.2	0.1	1.6	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
2TM	PF13239.6	gi|298674649|ref|YP_003726399.1|	-	0.33	11.3	2.9	0.39	11.0	2.9	1.1	1	0	0	1	1	1	0	2TM	domain
Peptidase_S8	PF00082.22	gi|298674650|ref|YP_003726400.1|	-	7.3e-20	71.4	2.8	1.6e-15	57.1	0.0	2.6	3	0	0	3	3	3	2	Subtilase	family
BIRC6	PF12356.8	gi|298674650|ref|YP_003726400.1|	-	0.055	12.9	0.1	0.34	10.3	0.0	2.3	2	0	0	2	2	2	0	Baculoviral	IAP	repeat-containing	protein	6
Smg4_UPF3	PF03467.15	gi|298674650|ref|YP_003726400.1|	-	0.081	12.9	7.6	3.2	7.8	0.1	3.0	2	1	1	3	3	3	0	Smg-4/UPF3	family
PGF-CTERM	PF18204.1	gi|298674650|ref|YP_003726400.1|	-	0.39	10.8	1.5	0.64	10.1	0.0	2.0	2	0	0	2	2	2	0	PGF-CTERM	motif
NTP_transf_3	PF12804.7	gi|298674651|ref|YP_003726401.1|	-	3.4e-30	105.5	0.0	4e-30	105.3	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CofC	PF01983.16	gi|298674651|ref|YP_003726401.1|	-	0.00017	20.8	0.0	0.00033	19.9	0.0	1.4	1	0	0	1	1	1	1	Guanylyl	transferase	CofC	like
NTP_transferase	PF00483.23	gi|298674651|ref|YP_003726401.1|	-	0.00059	19.5	0.0	0.00078	19.1	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
CTP_transf_3	PF02348.19	gi|298674651|ref|YP_003726401.1|	-	0.0057	16.6	0.0	0.012	15.6	0.0	1.4	1	1	0	1	1	1	1	Cytidylyltransferase
Glycos_transf_2	PF00535.26	gi|298674651|ref|YP_003726401.1|	-	0.023	14.5	0.1	0.03	14.1	0.1	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
DUF2148	PF09918.9	gi|298674652|ref|YP_003726402.1|	-	4.1e-31	106.8	0.5	7.3e-31	106.0	0.5	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	containing	a	ferredoxin	domain	(DUF2148)
FeS	PF04060.13	gi|298674652|ref|YP_003726402.1|	-	0.00077	19.1	1.4	0.0015	18.2	1.4	1.4	1	0	0	1	1	1	1	Putative	Fe-S	cluster
OrfB_IS605	PF01385.19	gi|298674653|ref|YP_003726403.1|	-	9.1e-25	87.2	1.0	2.3e-24	85.9	0.0	2.1	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674653|ref|YP_003726403.1|	-	4.7e-12	45.6	0.1	1.6e-11	43.9	0.0	2.0	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
RuvX	PF03652.15	gi|298674653|ref|YP_003726403.1|	-	0.055	13.9	0.0	0.11	12.9	0.0	1.4	1	0	0	1	1	1	0	Holliday	junction	resolvase
DDE_Tnp_IS240	PF13610.6	gi|298674654|ref|YP_003726404.1|	-	2.7e-10	40.6	0.1	4.8e-10	39.8	0.1	1.4	1	0	0	1	1	1	1	DDE	domain
DDE_Tnp_IS66	PF03050.14	gi|298674654|ref|YP_003726404.1|	-	0.00024	20.7	0.0	0.00037	20.1	0.0	1.2	1	0	0	1	1	1	1	Transposase	IS66	family
DDE_Tnp_ISL3	PF01610.17	gi|298674654|ref|YP_003726404.1|	-	0.00074	19.3	0.0	0.0013	18.5	0.0	1.4	1	1	0	1	1	1	1	Transposase
DDE_3	PF13358.6	gi|298674654|ref|YP_003726404.1|	-	0.0042	16.9	0.0	0.1	12.4	0.0	2.6	2	2	2	4	4	4	1	DDE	superfamily	endonuclease
Transposase_mut	PF00872.18	gi|298674654|ref|YP_003726404.1|	-	0.021	13.7	0.1	1.6	7.5	0.0	2.3	2	1	0	2	2	2	0	Transposase,	Mutator	family
HAD	PF12710.7	gi|298674654|ref|YP_003726404.1|	-	0.063	13.7	0.0	0.16	12.4	0.0	1.8	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
UvrC_HhH_N	PF08459.11	gi|298674654|ref|YP_003726404.1|	-	0.11	12.4	0.0	2.9	7.8	0.0	2.3	2	0	0	2	2	2	0	UvrC	Helix-hairpin-helix	N-terminal
DUF460	PF04312.13	gi|298674655|ref|YP_003726405.1|	-	1.9e-48	163.8	0.2	6.2e-48	162.1	0.2	1.9	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
acVLRF1	PF18859.1	gi|298674655|ref|YP_003726405.1|	-	0.0006	20.1	0.0	0.0015	18.8	0.0	1.7	1	0	0	1	1	1	1	Actinobacteria/chloroflexi	VLRF1	release	factor
AAA_23	PF13476.6	gi|298674655|ref|YP_003726405.1|	-	0.0037	17.8	20.3	0.0037	17.8	20.3	2.5	3	1	1	4	4	4	1	AAA	domain
Nitro_FeMo-Co	PF02579.17	gi|298674655|ref|YP_003726405.1|	-	0.028	14.8	0.1	5.9	7.3	0.0	3.4	2	1	1	3	3	3	0	Dinitrogenase	iron-molybdenum	cofactor
DUF4392	PF14336.6	gi|298674655|ref|YP_003726405.1|	-	0.079	12.4	3.5	0.13	11.7	0.0	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4392)
DUF4407	PF14362.6	gi|298674655|ref|YP_003726405.1|	-	0.15	11.4	8.8	0.29	10.5	8.8	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
FAM76	PF16046.5	gi|298674655|ref|YP_003726405.1|	-	0.4	10.0	22.4	0.77	9.1	22.4	1.4	1	0	0	1	1	1	0	FAM76	protein
CC2-LZ	PF16516.5	gi|298674655|ref|YP_003726405.1|	-	0.51	10.7	18.3	2.1	8.7	4.1	2.8	2	0	0	2	2	2	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
MitMem_reg	PF13012.6	gi|298674655|ref|YP_003726405.1|	-	1.4	9.4	6.6	16	6.0	1.1	2.7	1	1	1	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
Phage_lysis	PF03245.13	gi|298674655|ref|YP_003726405.1|	-	1.5	9.0	7.4	0.23	11.6	0.3	2.4	2	0	0	2	2	2	0	Bacteriophage	Rz	lysis	protein
Nse4_C	PF08743.10	gi|298674655|ref|YP_003726405.1|	-	2.2	8.6	6.7	0.15	12.3	1.0	2.1	2	0	0	2	2	1	0	Nse4	C-terminal
DUF641	PF04859.12	gi|298674655|ref|YP_003726405.1|	-	3.7	7.9	24.6	0.45	10.9	9.6	2.8	2	1	1	3	3	3	0	Plant	protein	of	unknown	function	(DUF641)
LMBR1	PF04791.16	gi|298674655|ref|YP_003726405.1|	-	4.7	6.0	7.4	8.7	5.1	7.4	1.5	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
DUF4094	PF13334.6	gi|298674655|ref|YP_003726405.1|	-	7.7	7.0	8.3	1.4	9.4	0.8	2.8	2	1	1	3	3	2	0	Domain	of	unknown	function	(DUF4094)
RIO1	PF01163.22	gi|298674656|ref|YP_003726406.1|	-	9.2e-45	152.5	0.3	1.4e-44	152.0	0.3	1.2	1	0	0	1	1	1	1	RIO1	family
Rio2_N	PF09202.11	gi|298674656|ref|YP_003726406.1|	-	8.6e-25	86.8	0.0	1.7e-24	85.8	0.0	1.5	1	0	0	1	1	1	1	Rio2,	N-terminal
APH	PF01636.23	gi|298674656|ref|YP_003726406.1|	-	0.0009	19.2	0.1	0.037	13.9	0.0	2.1	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Kdo	PF06293.14	gi|298674656|ref|YP_003726406.1|	-	0.0093	15.3	0.1	3.1	7.1	0.0	2.2	1	1	1	2	2	2	2	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase	PF00069.25	gi|298674656|ref|YP_003726406.1|	-	0.025	14.0	0.2	0.045	13.1	0.0	1.6	2	0	0	2	2	2	0	Protein	kinase	domain
Tfb5	PF06331.12	gi|298674656|ref|YP_003726406.1|	-	0.069	13.1	0.0	0.17	11.9	0.0	1.6	1	0	0	1	1	1	0	Transcription	factor	TFIIH	complex	subunit	Tfb5
DUF2111	PF09884.9	gi|298674657|ref|YP_003726407.1|	-	9.3e-36	121.8	1.1	1.2e-35	121.4	1.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2111)
Pyr_redox_2	PF07992.14	gi|298674658|ref|YP_003726408.1|	-	1.7e-53	181.8	0.2	2e-53	181.6	0.2	1.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|298674658|ref|YP_003726408.1|	-	5.1e-28	98.2	3.9	1.2e-20	74.0	0.1	2.1	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|298674658|ref|YP_003726408.1|	-	4.7e-16	59.1	3.7	4.7e-13	49.5	0.1	2.9	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|298674658|ref|YP_003726408.1|	-	1.1e-07	31.6	0.1	1.1e-07	31.6	0.1	2.3	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|298674658|ref|YP_003726408.1|	-	1.2e-07	31.2	4.9	0.0014	17.7	0.5	3.9	3	1	1	4	4	4	2	FAD	binding	domain
HI0933_like	PF03486.14	gi|298674658|ref|YP_003726408.1|	-	2e-07	30.1	1.0	0.0027	16.5	0.2	2.8	3	0	0	3	3	3	2	HI0933-like	protein
DAO	PF01266.24	gi|298674658|ref|YP_003726408.1|	-	2.4e-06	27.4	6.2	0.017	14.8	0.0	2.9	2	1	1	3	3	3	2	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|298674658|ref|YP_003726408.1|	-	2.2e-05	23.7	7.5	0.0017	17.5	0.5	3.6	3	1	1	4	4	4	2	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|298674658|ref|YP_003726408.1|	-	6.2e-05	23.1	0.9	0.00012	22.2	0.1	1.8	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.17	gi|298674658|ref|YP_003726408.1|	-	8.8e-05	21.8	2.9	0.028	13.7	0.4	2.5	3	0	0	3	3	3	2	Thi4	family
FAD_binding_3	PF01494.19	gi|298674658|ref|YP_003726408.1|	-	0.00034	20.0	2.6	0.0068	15.7	0.2	2.5	2	1	0	2	2	2	1	FAD	binding	domain
Lycopene_cycl	PF05834.12	gi|298674658|ref|YP_003726408.1|	-	0.0011	18.1	1.0	1.5	7.8	0.4	2.9	3	0	0	3	3	3	2	Lycopene	cyclase	protein
NAD_binding_9	PF13454.6	gi|298674658|ref|YP_003726408.1|	-	0.0015	18.6	0.9	0.17	11.9	0.0	2.6	3	0	0	3	3	3	1	FAD-NAD(P)-binding
Thioredoxin_3	PF13192.6	gi|298674659|ref|YP_003726409.1|	-	1.1e-10	41.3	0.0	1.2e-10	41.3	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin	PF00085.20	gi|298674659|ref|YP_003726409.1|	-	9.2e-06	25.6	0.0	9.8e-06	25.5	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Glutaredoxin	PF00462.24	gi|298674659|ref|YP_003726409.1|	-	1.6e-05	25.0	0.0	2.1e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	Glutaredoxin
DSBA	PF01323.20	gi|298674659|ref|YP_003726409.1|	-	0.0093	15.8	0.1	0.012	15.4	0.1	1.3	1	1	0	1	1	1	1	DSBA-like	thioredoxin	domain
DUF836	PF05768.14	gi|298674659|ref|YP_003726409.1|	-	0.029	14.8	0.0	0.034	14.5	0.0	1.1	1	0	0	1	1	1	0	Glutaredoxin-like	domain	(DUF836)
ArsD	PF06953.11	gi|298674659|ref|YP_003726409.1|	-	0.12	12.7	0.0	0.14	12.5	0.0	1.2	1	0	0	1	1	1	0	Arsenical	resistance	operon	trans-acting	repressor	ArsD
Acetyltransf_1	PF00583.25	gi|298674660|ref|YP_003726410.1|	-	1e-11	45.1	0.0	1.5e-11	44.5	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|298674660|ref|YP_003726410.1|	-	6.4e-09	36.1	0.1	1.4e-08	35.0	0.0	1.6	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|298674660|ref|YP_003726410.1|	-	1.7e-07	31.2	0.0	3.2e-07	30.3	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|298674660|ref|YP_003726410.1|	-	0.00057	20.0	0.0	0.00095	19.3	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
FR47	PF08445.10	gi|298674660|ref|YP_003726410.1|	-	0.0011	18.9	0.1	0.0043	17.0	0.0	2.0	2	1	0	2	2	2	1	FR47-like	protein
Acetyltransf_3	PF13302.7	gi|298674660|ref|YP_003726410.1|	-	0.0011	19.6	0.0	0.0017	19.1	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
DUF1664	PF07889.12	gi|298674661|ref|YP_003726411.1|	-	0.00064	19.8	32.0	0.0053	16.8	4.0	4.3	3	1	0	4	4	4	3	Protein	of	unknown	function	(DUF1664)
Spc7	PF08317.11	gi|298674661|ref|YP_003726411.1|	-	0.0008	18.4	40.5	0.19	10.6	8.4	3.3	2	1	1	3	3	3	3	Spc7	kinetochore	protein
AKNA	PF12443.8	gi|298674661|ref|YP_003726411.1|	-	0.06	14.0	0.5	0.06	14.0	0.5	3.2	2	1	2	4	4	3	0	AT-hook-containing	transcription	factor
PilJ	PF13675.6	gi|298674661|ref|YP_003726411.1|	-	0.2	11.7	0.1	0.2	11.7	0.1	3.3	3	1	2	5	5	4	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
DUF4795	PF16043.5	gi|298674661|ref|YP_003726411.1|	-	0.2	11.2	43.0	0.1	12.2	3.5	3.8	2	1	2	4	4	4	0	Domain	of	unknown	function	(DUF4795)
AAA_13	PF13166.6	gi|298674661|ref|YP_003726411.1|	-	0.28	9.8	44.3	0.058	12.0	9.9	3.2	2	1	1	3	3	3	0	AAA	domain
DUF3450	PF11932.8	gi|298674661|ref|YP_003726411.1|	-	0.43	9.8	31.3	0.63	9.3	3.9	3.6	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3450)
Fez1	PF06818.15	gi|298674661|ref|YP_003726411.1|	-	0.43	11.0	33.5	1.1	9.7	1.6	3.3	3	1	1	4	4	3	0	Fez1
NPV_P10	PF05531.12	gi|298674661|ref|YP_003726411.1|	-	0.49	10.9	47.0	7.1	7.2	1.4	7.3	2	2	3	5	5	5	0	Nucleopolyhedrovirus	P10	protein
Exonuc_VII_L	PF02601.15	gi|298674661|ref|YP_003726411.1|	-	0.67	9.5	27.6	0.3	10.6	1.1	3.1	2	1	1	3	3	3	0	Exonuclease	VII,	large	subunit
Seryl_tRNA_N	PF02403.22	gi|298674661|ref|YP_003726411.1|	-	0.93	9.8	43.0	0.39	11.0	8.2	5.0	3	2	2	5	5	5	0	Seryl-tRNA	synthetase	N-terminal	domain
GARP	PF16731.5	gi|298674661|ref|YP_003726411.1|	-	1	9.0	13.8	5.1	6.7	0.5	3.9	2	2	1	3	3	3	0	Glutamic	acid/alanine-rich	protein	of	Trypanosoma
AIP3	PF03915.13	gi|298674661|ref|YP_003726411.1|	-	1.1	8.3	39.4	0.24	10.4	20.0	3.1	2	1	1	3	3	3	0	Actin	interacting	protein	3
Laminin_II	PF06009.12	gi|298674661|ref|YP_003726411.1|	-	1.2	9.2	40.1	2.6	8.1	3.4	5.0	2	1	3	5	5	5	0	Laminin	Domain	II
APG6_N	PF17675.1	gi|298674661|ref|YP_003726411.1|	-	1.4	9.4	36.9	0.046	14.3	2.8	4.1	2	1	1	3	3	2	0	Apg6	coiled-coil	region
CENP-F_leu_zip	PF10473.9	gi|298674661|ref|YP_003726411.1|	-	1.6	8.7	40.0	0.062	13.3	7.4	4.2	2	1	2	4	4	4	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
HIP1_clath_bdg	PF16515.5	gi|298674661|ref|YP_003726411.1|	-	1.7	9.3	33.4	0.49	11.0	4.7	4.8	3	1	1	4	4	4	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
COG2	PF06148.11	gi|298674661|ref|YP_003726411.1|	-	2.1	8.5	26.7	2.4	8.3	2.0	5.0	3	1	2	6	6	6	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
GrpE	PF01025.19	gi|298674661|ref|YP_003726411.1|	-	2.2	7.9	36.6	0.98	9.1	1.7	4.6	2	1	2	4	4	4	0	GrpE
DUF3053	PF11254.8	gi|298674661|ref|YP_003726411.1|	-	2.3	7.7	12.7	0.51	9.9	0.6	3.6	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3053)
DUF4349	PF14257.6	gi|298674661|ref|YP_003726411.1|	-	4	6.8	23.8	0.95	8.9	1.8	4.1	2	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4349)
SlyX	PF04102.12	gi|298674661|ref|YP_003726411.1|	-	4.1	8.1	18.4	4.5	8.0	0.4	5.2	3	2	1	4	4	4	0	SlyX
Fib_alpha	PF08702.10	gi|298674661|ref|YP_003726411.1|	-	4.2	7.6	48.7	0.21	11.8	5.1	4.8	3	1	2	5	5	4	0	Fibrinogen	alpha/beta	chain	family
Occludin_ELL	PF07303.13	gi|298674661|ref|YP_003726411.1|	-	4.7	8.0	30.9	0.57	10.9	2.9	5.5	3	2	1	4	4	4	0	Occludin	homology	domain
M	PF02370.16	gi|298674661|ref|YP_003726411.1|	-	6.2	7.7	6.5	8.4	7.3	1.3	4.2	3	0	0	3	3	1	0	M	protein	repeat
DUF16	PF01519.16	gi|298674661|ref|YP_003726411.1|	-	6.4	7.3	44.6	0.068	13.7	7.8	4.9	3	2	0	3	3	2	0	Protein	of	unknown	function	DUF16
TMPIT	PF07851.13	gi|298674661|ref|YP_003726411.1|	-	8.3	5.6	35.0	0.076	12.2	4.9	3.9	2	1	2	4	4	4	0	TMPIT-like	protein
LPP	PF04728.13	gi|298674661|ref|YP_003726411.1|	-	8.7	6.8	28.4	8.5	6.9	1.6	6.8	4	2	1	5	5	5	0	Lipoprotein	leucine-zipper
Atg14	PF10186.9	gi|298674661|ref|YP_003726411.1|	-	9.7	5.2	33.7	3.3	6.7	5.2	3.4	2	1	1	3	3	3	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Importin_rep_6	PF18829.1	gi|298674662|ref|YP_003726412.1|	-	0.051	13.7	0.2	0.29	11.3	0.1	2.2	2	0	0	2	2	2	0	Importin	repeat	6
p31comet	PF06581.12	gi|298674662|ref|YP_003726412.1|	-	0.062	12.5	0.0	0.085	12.0	0.0	1.1	1	0	0	1	1	1	0	Mad1	and	Cdc20-bound-Mad2	binding
ATPase	PF06745.13	gi|298674663|ref|YP_003726413.1|	-	2e-47	161.5	0.0	3.7e-47	160.6	0.0	1.4	2	0	0	2	2	2	1	KaiC
AAA_25	PF13481.6	gi|298674663|ref|YP_003726413.1|	-	1.8e-08	34.2	0.0	2.7e-08	33.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.11	gi|298674663|ref|YP_003726413.1|	-	0.00018	20.3	0.1	0.0025	16.5	0.1	2.1	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_24	PF13479.6	gi|298674663|ref|YP_003726413.1|	-	0.00025	20.9	0.0	0.00056	19.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|298674663|ref|YP_003726413.1|	-	0.00027	20.4	0.0	0.00043	19.7	0.0	1.4	1	1	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
Rad51	PF08423.11	gi|298674663|ref|YP_003726413.1|	-	0.00045	19.6	0.0	0.00066	19.0	0.0	1.2	1	0	0	1	1	1	1	Rad51
AAA_14	PF13173.6	gi|298674663|ref|YP_003726413.1|	-	0.00047	20.2	0.0	0.0017	18.4	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|298674663|ref|YP_003726413.1|	-	0.0046	16.7	0.0	0.0096	15.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MEDS	PF14417.6	gi|298674663|ref|YP_003726413.1|	-	0.0059	16.5	0.0	0.011	15.5	0.0	1.5	1	0	0	1	1	1	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
T2SSE	PF00437.20	gi|298674663|ref|YP_003726413.1|	-	0.0074	15.4	0.0	0.012	14.7	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
IstB_IS21	PF01695.17	gi|298674663|ref|YP_003726413.1|	-	0.012	15.4	0.0	0.023	14.4	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_33	PF13671.6	gi|298674663|ref|YP_003726413.1|	-	0.016	15.4	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|298674663|ref|YP_003726413.1|	-	0.017	15.4	0.0	0.036	14.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.26	gi|298674663|ref|YP_003726413.1|	-	0.017	14.8	0.0	0.038	13.7	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_7	PF12775.7	gi|298674663|ref|YP_003726413.1|	-	0.03	13.8	1.2	0.048	13.2	0.0	1.8	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
ABC_tran	PF00005.27	gi|298674663|ref|YP_003726413.1|	-	0.034	14.7	0.1	0.1	13.1	0.0	1.9	2	0	0	2	2	2	0	ABC	transporter
AAA_16	PF13191.6	gi|298674663|ref|YP_003726413.1|	-	0.057	13.8	0.1	0.27	11.6	0.1	1.9	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_5	PF07728.14	gi|298674663|ref|YP_003726413.1|	-	0.078	13.0	0.1	0.65	10.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
FtsK_SpoIIIE	PF01580.18	gi|298674663|ref|YP_003726413.1|	-	0.11	11.9	0.1	0.18	11.2	0.1	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
LSM	PF01423.22	gi|298674664|ref|YP_003726414.1|	-	0.00042	20.0	0.1	0.00056	19.5	0.1	1.2	1	0	0	1	1	1	1	LSM	domain
Gemin6	PF06372.12	gi|298674664|ref|YP_003726414.1|	-	0.043	13.4	0.1	0.051	13.1	0.1	1.0	1	0	0	1	1	1	0	Gemin6	protein
V4R	PF02830.18	gi|298674665|ref|YP_003726415.1|	-	3.9e-07	30.0	0.9	9e-07	28.8	0.9	1.6	1	0	0	1	1	1	1	V4R	domain
Folliculin	PF11704.8	gi|298674665|ref|YP_003726415.1|	-	3.9	7.3	9.4	5.7	6.8	9.4	1.2	1	0	0	1	1	1	0	Vesicle	coat	protein	involved	in	Golgi	to	plasma	membrane	transport
DUF4834	PF16118.5	gi|298674665|ref|YP_003726415.1|	-	7.1	7.7	9.5	13	6.9	9.5	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
GNAT_acetyltr_2	PF13718.6	gi|298674665|ref|YP_003726415.1|	-	9.5	5.5	7.8	1.1e+02	2.1	7.0	2.1	2	0	0	2	2	2	0	GNAT	acetyltransferase	2
CheF-arch	PF04283.12	gi|298674666|ref|YP_003726416.1|	-	0.011	15.4	0.0	0.028	14.2	0.1	1.7	1	1	0	1	1	1	0	Chemotaxis	signal	transduction	system	protein	F	from	archaea
GRAM	PF02893.20	gi|298674666|ref|YP_003726416.1|	-	0.14	12.1	0.0	0.41	10.5	0.0	1.8	2	0	0	2	2	2	0	GRAM	domain
Acetyltransf_1	PF00583.25	gi|298674667|ref|YP_003726417.1|	-	7e-06	26.3	0.0	1.6e-05	25.1	0.0	1.7	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	family
Hist_deacetyl	PF00850.19	gi|298674668|ref|YP_003726418.1|	-	9.1e-80	268.4	0.0	1.5e-79	267.7	0.0	1.3	1	0	0	1	1	1	1	Histone	deacetylase	domain
SUR7	PF06687.12	gi|298674668|ref|YP_003726418.1|	-	0.81	9.3	3.5	1.6	8.3	3.5	1.5	1	1	0	1	1	1	0	SUR7/PalI	family
Transglut_C	PF00927.22	gi|298674669|ref|YP_003726419.1|	-	0.0096	16.1	0.1	0.022	14.9	0.1	1.6	1	0	0	1	1	1	1	Transglutaminase	family,	C-terminal	ig	like	domain
TRAP_beta	PF05753.14	gi|298674669|ref|YP_003726419.1|	-	0.02	14.3	0.0	0.13	11.6	0.1	2.2	2	0	0	2	2	2	0	Translocon-associated	protein	beta	(TRAPB)
DUF3139	PF11337.8	gi|298674669|ref|YP_003726419.1|	-	2.6	8.8	7.5	0.55	10.9	0.4	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
Chi-conotoxin	PF16981.5	gi|298674670|ref|YP_003726420.1|	-	0.03	14.6	2.5	1.6	9.0	0.9	2.5	2	0	0	2	2	2	0	chi-Conotoxin	or	t	superfamily
Arch_flagellin	PF01917.16	gi|298674671|ref|YP_003726421.1|	-	1.1e-36	126.5	7.6	1.5e-36	126.1	7.6	1.2	1	0	0	1	1	1	1	Archaebacterial	flagellin
DUF4330	PF14221.6	gi|298674671|ref|YP_003726421.1|	-	0.0015	18.8	1.0	0.55	10.4	0.2	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4330)
Adap_comp_sub	PF00928.21	gi|298674671|ref|YP_003726421.1|	-	0.04	13.3	0.3	0.05	13.0	0.3	1.2	1	0	0	1	1	1	0	Adaptor	complexes	medium	subunit	family
CbtA_toxin	PF06755.12	gi|298674671|ref|YP_003726421.1|	-	0.044	13.8	0.0	0.18	11.8	0.0	1.9	1	1	1	2	2	2	0	CbtA_toxin	of	type	IV	toxin-antitoxin	system
Arch_flagellin	PF01917.16	gi|298674672|ref|YP_003726422.1|	-	1.8e-32	112.8	15.1	4.1e-32	111.6	15.1	1.6	1	1	0	1	1	1	1	Archaebacterial	flagellin
Methyltransf_21	PF05050.12	gi|298674672|ref|YP_003726422.1|	-	0.47	10.5	2.3	1.5	8.8	2.3	1.8	1	1	0	1	1	1	0	Methyltransferase	FkbM	domain
Herpes_UL73	PF03554.13	gi|298674673|ref|YP_003726423.1|	-	0.15	12.0	0.3	0.15	12.0	0.3	3.0	3	0	0	3	3	3	0	UL73	viral	envelope	glycoprotein
Yip1	PF04893.17	gi|298674673|ref|YP_003726423.1|	-	4.3	7.0	28.9	1.5	8.5	5.5	3.0	2	2	0	2	2	2	0	Yip1	domain
Mrr_N	PF14338.6	gi|298674674|ref|YP_003726424.1|	-	0.026	14.6	0.0	0.93	9.7	0.0	2.3	2	0	0	2	2	2	0	Mrr	N-terminal	domain
TFIIE_beta	PF02186.15	gi|298674674|ref|YP_003726424.1|	-	0.045	14.0	0.0	0.063	13.6	0.0	1.4	1	1	0	1	1	1	0	TFIIE	beta	subunit	core	domain
IGPS	PF00218.21	gi|298674675|ref|YP_003726425.1|	-	8.6e-71	238.1	1.8	9.8e-71	237.9	1.8	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
NanE	PF04131.14	gi|298674675|ref|YP_003726425.1|	-	9.3e-05	21.7	1.1	0.0011	18.2	0.1	2.9	2	2	1	3	3	3	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
His_biosynth	PF00977.21	gi|298674675|ref|YP_003726425.1|	-	0.00043	19.8	0.1	0.0013	18.3	0.0	1.8	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
QRPTase_C	PF01729.19	gi|298674675|ref|YP_003726425.1|	-	0.00084	19.1	0.3	0.0016	18.3	0.3	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
PcrB	PF01884.17	gi|298674675|ref|YP_003726425.1|	-	0.0081	15.6	1.7	0.013	14.9	0.4	2.0	2	1	0	2	2	2	1	PcrB	family
Trp_syntA	PF00290.20	gi|298674675|ref|YP_003726425.1|	-	0.021	13.7	2.0	0.054	12.3	0.3	2.5	3	1	0	3	3	3	0	Tryptophan	synthase	alpha	chain
IMPDH	PF00478.25	gi|298674675|ref|YP_003726425.1|	-	0.033	13.2	0.0	0.08	11.9	0.0	1.6	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
ThiG	PF05690.14	gi|298674675|ref|YP_003726425.1|	-	0.042	13.2	0.0	0.15	11.3	0.0	1.9	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
DUF61	PF01886.16	gi|298674675|ref|YP_003726425.1|	-	0.096	12.7	0.7	0.24	11.4	0.1	2.0	2	1	1	3	3	3	0	Protein	of	unknown	function	DUF61
PALP	PF00291.25	gi|298674676|ref|YP_003726426.1|	-	1.2e-40	139.8	0.6	1.6e-40	139.4	0.6	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
SF3A3	PF16837.5	gi|298674676|ref|YP_003726426.1|	-	0.023	15.2	1.0	0.058	13.9	1.0	1.6	1	0	0	1	1	1	0	Pre-mRNA-splicing	factor	SF3A3,	of	SF3a	complex,	Prp9
Trp_syntA	PF00290.20	gi|298674677|ref|YP_003726427.1|	-	6e-89	297.3	0.1	7.4e-89	297.0	0.1	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.21	gi|298674677|ref|YP_003726427.1|	-	9.1e-05	22.0	0.2	0.00021	20.8	0.1	1.6	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
IGPS	PF00218.21	gi|298674677|ref|YP_003726427.1|	-	0.0022	17.2	0.0	0.01	15.0	0.0	1.8	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
NanE	PF04131.14	gi|298674677|ref|YP_003726427.1|	-	0.0045	16.2	0.1	0.008	15.4	0.1	1.5	1	1	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
PcrB	PF01884.17	gi|298674677|ref|YP_003726427.1|	-	0.012	15.1	0.6	0.25	10.8	0.2	2.6	2	1	1	3	3	3	0	PcrB	family
Pneumo_ncap	PF03246.13	gi|298674677|ref|YP_003726427.1|	-	0.016	14.0	0.6	0.048	12.4	0.4	1.8	1	1	1	2	2	2	0	Pneumovirus	nucleocapsid	protein
NMO	PF03060.15	gi|298674677|ref|YP_003726427.1|	-	0.048	13.0	0.0	0.071	12.5	0.0	1.4	1	0	0	1	1	1	0	Nitronate	monooxygenase
PucR	PF07905.11	gi|298674677|ref|YP_003726427.1|	-	0.059	13.6	0.0	0.92	9.8	0.0	2.3	2	0	0	2	2	2	0	Purine	catabolism	regulatory	protein-like	family
SRP54	PF00448.22	gi|298674678|ref|YP_003726428.1|	-	1.9e-71	239.8	0.3	2.7e-71	239.3	0.3	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.19	gi|298674678|ref|YP_003726428.1|	-	6e-10	39.2	6.9	6.1e-10	39.2	1.1	2.6	2	0	0	2	2	2	1	SRP54-type	protein,	helical	bundle	domain
AAA_17	PF13207.6	gi|298674678|ref|YP_003726428.1|	-	2.3e-05	24.8	0.0	4.7e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|298674678|ref|YP_003726428.1|	-	2.5e-05	24.1	0.1	4.7e-05	23.2	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|298674678|ref|YP_003726428.1|	-	5.2e-05	22.6	0.1	8.6e-05	21.9	0.1	1.3	1	0	0	1	1	1	1	Zeta	toxin
DUF2075	PF09848.9	gi|298674678|ref|YP_003726428.1|	-	8.2e-05	22.0	0.8	0.00024	20.4	0.3	1.8	1	1	1	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_7	PF12775.7	gi|298674678|ref|YP_003726428.1|	-	0.00049	19.7	0.0	0.0015	18.1	0.0	1.8	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
AAA_22	PF13401.6	gi|298674678|ref|YP_003726428.1|	-	0.00064	20.0	0.0	0.0015	18.8	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|298674678|ref|YP_003726428.1|	-	0.00066	20.0	0.0	0.0012	19.1	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|298674678|ref|YP_003726428.1|	-	0.00082	19.8	0.3	0.0069	16.8	0.3	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Thymidylate_kin	PF02223.17	gi|298674678|ref|YP_003726428.1|	-	0.0017	18.0	0.3	0.018	14.7	0.1	2.4	2	1	0	2	2	1	1	Thymidylate	kinase
AAA_33	PF13671.6	gi|298674678|ref|YP_003726428.1|	-	0.0028	17.8	0.0	0.0057	16.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.27	gi|298674678|ref|YP_003726428.1|	-	0.0041	17.6	0.0	0.011	16.3	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
AAA_16	PF13191.6	gi|298674678|ref|YP_003726428.1|	-	0.0053	17.2	0.0	0.015	15.7	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
MMR_HSR1	PF01926.23	gi|298674678|ref|YP_003726428.1|	-	0.0086	16.1	1.0	0.028	14.5	0.5	2.1	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_5	PF07728.14	gi|298674678|ref|YP_003726428.1|	-	0.0091	16.0	0.0	0.018	15.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
ResIII	PF04851.15	gi|298674678|ref|YP_003726428.1|	-	0.014	15.4	0.4	0.014	15.4	0.4	1.9	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
APS_kinase	PF01583.20	gi|298674678|ref|YP_003726428.1|	-	0.015	15.2	0.0	0.025	14.5	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
CbiA	PF01656.23	gi|298674678|ref|YP_003726428.1|	-	0.016	15.2	0.2	0.04	14.0	0.2	1.9	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
NTPase_1	PF03266.15	gi|298674678|ref|YP_003726428.1|	-	0.016	15.1	0.5	0.094	12.6	0.1	2.1	2	0	0	2	2	2	0	NTPase
KTI12	PF08433.10	gi|298674678|ref|YP_003726428.1|	-	0.021	14.3	0.1	0.04	13.4	0.1	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_24	PF13479.6	gi|298674678|ref|YP_003726428.1|	-	0.021	14.5	0.1	0.053	13.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
T2SSE	PF00437.20	gi|298674678|ref|YP_003726428.1|	-	0.022	13.9	0.1	0.039	13.0	0.1	1.4	1	1	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.6	gi|298674678|ref|YP_003726428.1|	-	0.024	15.0	0.1	0.059	13.7	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
LpxK	PF02606.14	gi|298674678|ref|YP_003726428.1|	-	0.031	13.4	0.0	0.048	12.8	0.0	1.4	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
Arf	PF00025.21	gi|298674678|ref|YP_003726428.1|	-	0.032	13.7	0.0	0.065	12.7	0.0	1.4	1	0	0	1	1	1	0	ADP-ribosylation	factor	family
FCP1_C	PF09309.10	gi|298674678|ref|YP_003726428.1|	-	0.034	14.0	0.7	0.05	13.5	0.7	1.3	1	0	0	1	1	1	0	FCP1,	C-terminal
TrwB_AAD_bind	PF10412.9	gi|298674678|ref|YP_003726428.1|	-	0.05	12.5	0.0	0.11	11.3	0.0	1.5	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_15	PF13175.6	gi|298674678|ref|YP_003726428.1|	-	0.058	13.1	0.1	0.058	13.1	0.1	2.1	1	1	0	2	2	2	0	AAA	ATPase	domain
MobB	PF03205.14	gi|298674678|ref|YP_003726428.1|	-	0.083	12.8	0.3	0.26	11.2	0.1	1.9	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
G-alpha	PF00503.20	gi|298674678|ref|YP_003726428.1|	-	0.092	11.9	0.7	0.13	11.4	0.0	1.6	1	1	1	2	2	2	0	G-protein	alpha	subunit
cobW	PF02492.19	gi|298674678|ref|YP_003726428.1|	-	0.1	12.2	1.5	0.17	11.5	0.5	1.8	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
PTPlike_phytase	PF14566.6	gi|298674678|ref|YP_003726428.1|	-	0.42	10.7	2.9	0.82	9.8	0.0	2.5	3	0	0	3	3	3	0	Inositol	hexakisphosphate
Prefoldin	PF02996.17	gi|298674679|ref|YP_003726429.1|	-	4.9e-25	87.8	4.1	6.2e-25	87.4	4.1	1.1	1	0	0	1	1	1	1	Prefoldin	subunit
Prefoldin_2	PF01920.20	gi|298674679|ref|YP_003726429.1|	-	5e-09	36.1	13.3	9.1e-05	22.4	0.8	2.3	2	0	0	2	2	2	2	Prefoldin	subunit
DUF1043	PF06295.12	gi|298674679|ref|YP_003726429.1|	-	0.0018	18.3	7.2	0.21	11.6	2.3	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1043)
Gp-FAR-1	PF05823.12	gi|298674679|ref|YP_003726429.1|	-	0.0018	18.7	2.5	0.044	14.1	0.6	2.1	2	0	0	2	2	2	1	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
FPP	PF05911.11	gi|298674679|ref|YP_003726429.1|	-	0.0028	16.0	5.1	0.0034	15.7	5.1	1.0	1	0	0	1	1	1	1	Filament-like	plant	protein,	long	coiled-coil
DUF2433	PF10360.9	gi|298674679|ref|YP_003726429.1|	-	0.003	17.7	2.5	1.9	8.6	1.3	2.4	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF2433)
Syntaxin_2	PF14523.6	gi|298674679|ref|YP_003726429.1|	-	0.0031	17.9	10.2	0.11	12.9	10.2	2.3	1	1	0	1	1	1	1	Syntaxin-like	protein
DUF5082	PF16888.5	gi|298674679|ref|YP_003726429.1|	-	0.0031	17.8	8.6	0.63	10.3	3.4	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF5082)
DUF3510	PF12022.8	gi|298674679|ref|YP_003726429.1|	-	0.0033	17.8	0.3	0.0033	17.8	0.3	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF3510)
CdvA	PF18822.1	gi|298674679|ref|YP_003726429.1|	-	0.0055	16.5	11.5	0.084	12.7	0.9	2.2	2	0	0	2	2	2	2	CdvA-like	coiled-coil	domain
PI3K_P85_iSH2	PF16454.5	gi|298674679|ref|YP_003726429.1|	-	0.0095	15.5	14.9	0.03	13.9	14.9	1.7	1	1	0	1	1	1	1	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
BORCS8	PF10167.9	gi|298674679|ref|YP_003726429.1|	-	0.011	15.7	6.5	1.1	9.2	1.7	2.4	2	1	0	2	2	2	0	BLOC-1-related	complex	sub-unit	8
MscS_porin	PF12795.7	gi|298674679|ref|YP_003726429.1|	-	0.011	15.2	9.0	0.34	10.4	3.5	2.1	2	0	0	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
Spc7	PF08317.11	gi|298674679|ref|YP_003726429.1|	-	0.015	14.2	8.2	0.24	10.3	3.8	2.1	2	0	0	2	2	2	0	Spc7	kinetochore	protein
DASH_Dad3	PF08656.10	gi|298674679|ref|YP_003726429.1|	-	0.02	14.9	7.3	0.66	10.1	0.8	2.2	2	0	0	2	2	2	0	DASH	complex	subunit	Dad3
DUF2959	PF11172.8	gi|298674679|ref|YP_003726429.1|	-	0.021	14.9	7.6	1.2	9.2	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2959)
Tektin	PF03148.14	gi|298674679|ref|YP_003726429.1|	-	0.023	13.4	9.6	0.078	11.7	5.0	2.0	2	0	0	2	2	2	0	Tektin	family
KxDL	PF10241.9	gi|298674679|ref|YP_003726429.1|	-	0.025	14.9	4.7	1.2	9.5	1.6	2.3	2	0	0	2	2	2	0	Uncharacterized	conserved	protein
CREPT	PF16566.5	gi|298674679|ref|YP_003726429.1|	-	0.029	14.5	3.5	4.3	7.5	0.0	2.1	2	0	0	2	2	2	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
AATF-Che1	PF13339.6	gi|298674679|ref|YP_003726429.1|	-	0.03	15.0	3.7	0.043	14.5	3.7	1.3	1	0	0	1	1	1	0	Apoptosis	antagonizing	transcription	factor
Plk4_PB2	PF18409.1	gi|298674679|ref|YP_003726429.1|	-	0.03	15.0	7.4	1.4	9.6	0.4	2.1	1	1	1	2	2	2	0	Polo-like	Kinase	4	Polo	Box	2
GAS	PF13851.6	gi|298674679|ref|YP_003726429.1|	-	0.03	13.7	13.3	0.21	10.9	0.8	2.1	2	0	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
DUF948	PF06103.11	gi|298674679|ref|YP_003726429.1|	-	0.03	14.6	0.6	8.5	6.7	0.2	2.2	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Baculo_PEP_C	PF04513.12	gi|298674679|ref|YP_003726429.1|	-	0.033	14.2	0.7	6.7	6.8	0.1	2.2	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Fib_alpha	PF08702.10	gi|298674679|ref|YP_003726429.1|	-	0.04	14.1	8.0	0.44	10.7	2.6	2.1	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
PspA_IM30	PF04012.12	gi|298674679|ref|YP_003726429.1|	-	0.041	13.5	7.8	0.077	12.6	3.3	2.1	2	0	0	2	2	2	0	PspA/IM30	family
SLATT_1	PF18181.1	gi|298674679|ref|YP_003726429.1|	-	0.053	13.4	4.5	2.4	8.1	0.4	2.2	2	0	0	2	2	2	0	SMODS	and	SLOG-associating	2TM	effector	domain	1
DUF4446	PF14584.6	gi|298674679|ref|YP_003726429.1|	-	0.056	13.4	5.6	2.3	8.2	1.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4446)
phiKZ_IP	PF12699.7	gi|298674679|ref|YP_003726429.1|	-	0.057	12.6	3.3	0.42	9.7	3.0	2.0	1	1	0	1	1	1	0	phiKZ-like	phage	internal	head	proteins
FapA	PF03961.13	gi|298674679|ref|YP_003726429.1|	-	0.06	12.0	10.8	0.13	10.8	5.7	2.0	1	1	1	2	2	2	0	Flagellar	Assembly	Protein	A
LMBR1	PF04791.16	gi|298674679|ref|YP_003726429.1|	-	0.064	12.2	3.1	0.079	11.9	3.1	1.0	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
RasGAP_C	PF03836.15	gi|298674679|ref|YP_003726429.1|	-	0.067	13.3	12.7	0.11	12.6	0.6	2.1	2	0	0	2	2	2	0	RasGAP	C-terminus
DUF1664	PF07889.12	gi|298674679|ref|YP_003726429.1|	-	0.068	13.2	7.8	0.28	11.2	2.4	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF883	PF05957.13	gi|298674679|ref|YP_003726429.1|	-	0.07	13.7	0.8	0.32	11.6	0.2	2.2	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
ApoO	PF09769.9	gi|298674679|ref|YP_003726429.1|	-	0.075	13.0	2.6	6.8	6.7	0.1	2.3	2	0	0	2	2	2	0	Apolipoprotein	O
DUF4047	PF13256.6	gi|298674679|ref|YP_003726429.1|	-	0.078	13.2	5.4	1.5	9.0	1.5	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4047)
ApoLp-III	PF07464.11	gi|298674679|ref|YP_003726429.1|	-	0.078	13.1	8.8	0.31	11.1	3.6	2.2	2	0	0	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
WXG100	PF06013.12	gi|298674679|ref|YP_003726429.1|	-	0.086	13.1	8.2	1.1	9.6	2.6	2.5	2	1	0	2	2	2	0	Proteins	of	100	residues	with	WXG
YtxH	PF12732.7	gi|298674679|ref|YP_003726429.1|	-	0.088	13.3	6.5	0.27	11.8	3.2	2.3	2	0	0	2	2	2	0	YtxH-like	protein
OmpH	PF03938.14	gi|298674679|ref|YP_003726429.1|	-	0.1	12.9	13.3	0.21	11.9	7.1	2.1	2	0	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
L31	PF09784.9	gi|298674679|ref|YP_003726429.1|	-	0.14	12.6	2.9	13	6.2	0.0	2.1	2	0	0	2	2	2	0	Mitochondrial	ribosomal	protein	L31
FlxA	PF14282.6	gi|298674679|ref|YP_003726429.1|	-	0.14	12.1	12.0	0.089	12.8	0.8	2.4	2	0	0	2	2	2	0	FlxA-like	protein
Ax_dynein_light	PF10211.9	gi|298674679|ref|YP_003726429.1|	-	0.15	12.0	8.4	0.53	10.2	2.7	2.1	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
DUF5344	PF17279.2	gi|298674679|ref|YP_003726429.1|	-	0.15	12.6	11.4	1.8	9.2	0.4	2.9	2	1	1	3	3	3	0	Family	of	unknown	function	(DUF5344)
Laminin_II	PF06009.12	gi|298674679|ref|YP_003726429.1|	-	0.16	12.0	5.7	1.5	8.8	2.0	2.2	2	0	0	2	2	2	0	Laminin	Domain	II
FlaC_arch	PF05377.11	gi|298674679|ref|YP_003726429.1|	-	0.17	12.3	5.5	1.5	9.2	0.1	3.4	2	2	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
COG2	PF06148.11	gi|298674679|ref|YP_003726429.1|	-	0.23	11.6	5.2	5.3	7.1	0.8	2.2	2	0	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
APG17	PF04108.12	gi|298674679|ref|YP_003726429.1|	-	0.33	10.0	10.1	1.7	7.7	0.8	2.1	1	1	0	2	2	2	0	Autophagy	protein	Apg17
Prominin	PF05478.11	gi|298674679|ref|YP_003726429.1|	-	0.35	8.8	7.7	0.82	7.6	7.7	1.5	1	1	0	1	1	1	0	Prominin
IFT57	PF10498.9	gi|298674679|ref|YP_003726429.1|	-	0.38	9.7	15.6	1.3	8.0	5.6	2.0	2	0	0	2	2	2	0	Intra-flagellar	transport	protein	57
STAT_alpha	PF01017.20	gi|298674679|ref|YP_003726429.1|	-	0.43	10.5	11.0	0.97	9.3	11.0	1.5	1	1	0	1	1	1	0	STAT	protein,	all-alpha	domain
GrpE	PF01025.19	gi|298674679|ref|YP_003726429.1|	-	0.64	9.7	10.9	0.73	9.5	6.2	2.1	2	0	0	2	2	2	0	GrpE
TMPIT	PF07851.13	gi|298674679|ref|YP_003726429.1|	-	0.73	9.0	12.9	0.61	9.3	1.3	2.0	1	1	0	2	2	2	0	TMPIT-like	protein
SOAR	PF16533.5	gi|298674679|ref|YP_003726429.1|	-	0.77	9.8	7.2	1.9	8.5	0.2	2.6	2	1	0	2	2	2	0	STIM1	Orai1-activating	region
DUF4795	PF16043.5	gi|298674679|ref|YP_003726429.1|	-	0.78	9.3	10.0	4.1	7.0	10.0	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
Sulfatase_C	PF14707.6	gi|298674679|ref|YP_003726429.1|	-	0.83	10.4	4.5	7.2	7.4	1.2	2.1	2	0	0	2	2	2	0	C-terminal	region	of	aryl-sulfatase
DUF3135	PF11333.8	gi|298674679|ref|YP_003726429.1|	-	0.87	9.9	0.1	0.87	9.9	0.1	2.5	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF3135)
Mod_r	PF07200.13	gi|298674679|ref|YP_003726429.1|	-	0.9	9.6	14.2	19	5.3	14.2	2.2	1	1	0	1	1	1	0	Modifier	of	rudimentary	(Mod(r))	protein
ADIP	PF11559.8	gi|298674679|ref|YP_003726429.1|	-	1.1	9.3	11.9	1	9.4	5.6	2.1	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
FTA4	PF13093.6	gi|298674679|ref|YP_003726429.1|	-	1.3	8.9	11.1	6.5	6.6	11.3	1.8	1	1	0	1	1	1	0	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
Filament	PF00038.21	gi|298674679|ref|YP_003726429.1|	-	1.3	8.6	15.9	0.64	9.6	8.3	2.0	1	1	0	2	2	2	0	Intermediate	filament	protein
DUF4407	PF14362.6	gi|298674679|ref|YP_003726429.1|	-	1.4	8.2	7.8	3.8	6.8	7.5	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
T4SS	PF07996.11	gi|298674679|ref|YP_003726429.1|	-	1.4	9.2	12.8	0.16	12.3	0.5	2.7	2	1	1	3	3	3	0	Type	IV	secretion	system	proteins
DUF3552	PF12072.8	gi|298674679|ref|YP_003726429.1|	-	2	7.8	12.7	0.23	10.9	6.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3552)
BLOC1_2	PF10046.9	gi|298674679|ref|YP_003726429.1|	-	2	8.8	13.1	2.8	8.3	0.8	2.3	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF3450	PF11932.8	gi|298674679|ref|YP_003726429.1|	-	3.9	6.7	15.4	0.95	8.7	0.7	2.0	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3450)
LPP	PF04728.13	gi|298674679|ref|YP_003726429.1|	-	6.5	7.2	9.4	15	6.0	0.5	3.0	2	1	1	3	3	3	0	Lipoprotein	leucine-zipper
Nore1-SARAH	PF16517.5	gi|298674679|ref|YP_003726429.1|	-	8	6.5	9.7	16	5.5	1.7	2.6	2	0	0	2	2	2	0	Novel	Ras	effector	1	C-terminal	SARAH	(Sav/Rassf/Hpo)	domain
APG6_N	PF17675.1	gi|298674679|ref|YP_003726429.1|	-	9.9	6.7	15.3	12	6.4	6.1	2.1	2	0	0	2	2	2	0	Apg6	coiled-coil	region
Ribosomal_L18A	PF01775.17	gi|298674680|ref|YP_003726430.1|	-	5.5e-11	42.6	0.4	6.3e-11	42.4	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L18Ae/60S-L20/60S-L18A
Coatomer_E	PF04733.14	gi|298674680|ref|YP_003726430.1|	-	0.079	12.4	0.1	0.087	12.2	0.1	1.0	1	0	0	1	1	1	0	Coatomer	epsilon	subunit
eIF-6	PF01912.18	gi|298674681|ref|YP_003726431.1|	-	3.1e-68	229.1	6.3	3.7e-68	228.8	6.3	1.0	1	0	0	1	1	1	1	eIF-6	family
Ribosomal_L31e	PF01198.19	gi|298674682|ref|YP_003726432.1|	-	4.7e-09	36.4	0.2	5.7e-09	36.1	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31e
A1_Propeptide	PF07966.12	gi|298674682|ref|YP_003726432.1|	-	0.058	13.3	0.1	0.12	12.3	0.1	1.6	1	0	0	1	1	1	0	A1	Propeptide
Ribosomal_L39	PF00832.20	gi|298674683|ref|YP_003726433.1|	-	3.3e-20	71.4	11.4	3.8e-20	71.2	11.4	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
QueC	PF06508.13	gi|298674684|ref|YP_003726434.1|	-	0.04	13.4	0.0	0.081	12.4	0.0	1.6	1	1	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
DUF2654	PF10849.8	gi|298674684|ref|YP_003726434.1|	-	0.14	12.4	1.6	0.59	10.4	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2654)
dsDNA_bind	PF01984.20	gi|298674685|ref|YP_003726435.1|	-	2.3e-27	95.5	20.8	2.8e-27	95.2	20.8	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
Pkinase	PF00069.25	gi|298674685|ref|YP_003726435.1|	-	0.15	11.4	2.0	0.24	10.7	2.0	1.3	1	0	0	1	1	1	0	Protein	kinase	domain
F_actin_bund_C	PF18060.1	gi|298674685|ref|YP_003726435.1|	-	0.18	11.9	11.3	0.29	11.3	11.3	1.4	1	0	0	1	1	1	0	F	actin	bundling	C	terminal
Ribosomal_S19e	PF01090.19	gi|298674686|ref|YP_003726436.1|	-	8.3e-56	187.5	0.0	9.3e-56	187.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
Vault_4	PF17796.1	gi|298674686|ref|YP_003726436.1|	-	0.042	13.9	0.0	0.085	13.0	0.0	1.5	1	0	0	1	1	1	0	Major	Vault	Protein	repeat	domain
GntR	PF00392.21	gi|298674686|ref|YP_003726436.1|	-	0.075	12.7	0.1	0.19	11.4	0.1	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Adenylsucc_synt	PF00709.21	gi|298674688|ref|YP_003726438.1|	-	1.9e-162	541.0	0.0	2.2e-162	540.8	0.0	1.0	1	0	0	1	1	1	1	Adenylosuccinate	synthetase
Fer4_12	PF13353.6	gi|298674688|ref|YP_003726438.1|	-	0.0046	17.2	0.1	0.1	12.9	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Peptidase_M42	PF05343.14	gi|298674689|ref|YP_003726439.1|	-	1.7e-111	371.9	2.7	2e-111	371.7	2.7	1.0	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.28	gi|298674689|ref|YP_003726439.1|	-	2e-11	44.0	0.1	2.8e-11	43.5	0.1	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.17	gi|298674689|ref|YP_003726439.1|	-	3.1e-06	27.0	0.1	0.00067	19.4	0.0	2.3	2	0	0	2	2	2	2	Peptidase	family	M28
HMGL-like	PF00682.19	gi|298674690|ref|YP_003726440.1|	-	6.7e-81	271.7	0.3	1.1e-80	271.1	0.3	1.3	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.10	gi|298674690|ref|YP_003726440.1|	-	1.5e-35	122.0	2.2	2.6e-35	121.2	2.2	1.4	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
IMPDH	PF00478.25	gi|298674690|ref|YP_003726440.1|	-	0.0002	20.5	0.7	0.0002	20.5	0.7	1.9	2	0	0	2	2	2	1	IMP	dehydrogenase	/	GMP	reductase	domain
TPP_enzyme_N	PF02776.18	gi|298674691|ref|YP_003726441.1|	-	3.7e-58	195.9	0.1	4.6e-57	192.4	0.1	2.3	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|298674691|ref|YP_003726441.1|	-	2.3e-56	189.8	0.1	1.4e-54	184.1	0.0	2.8	2	1	1	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|298674691|ref|YP_003726441.1|	-	1.2e-53	180.5	0.0	2.4e-53	179.5	0.0	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.19	gi|298674691|ref|YP_003726441.1|	-	0.042	13.6	3.3	0.03	14.1	1.2	1.9	2	1	0	2	2	2	0	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Bmp	PF02608.14	gi|298674691|ref|YP_003726441.1|	-	0.094	11.7	0.0	6.5	5.6	0.0	2.2	2	0	0	2	2	2	0	ABC	transporter	substrate-binding	protein	PnrA-like
E1_dh	PF00676.20	gi|298674691|ref|YP_003726441.1|	-	0.34	9.8	2.0	2.7	6.9	0.1	2.6	3	0	0	3	3	3	0	Dehydrogenase	E1	component
ALS_ss_C	PF10369.9	gi|298674692|ref|YP_003726442.1|	-	2.5e-32	110.9	4.6	1.2e-31	108.7	1.6	2.1	2	0	0	2	2	2	1	Small	subunit	of	acetolactate	synthase
ACT_5	PF13710.6	gi|298674692|ref|YP_003726442.1|	-	1.5e-16	59.9	0.3	3.5e-15	55.6	0.1	2.4	2	0	0	2	2	2	1	ACT	domain
ACT	PF01842.25	gi|298674692|ref|YP_003726442.1|	-	2e-16	59.4	1.1	4.6e-16	58.3	0.1	2.0	2	1	0	2	2	2	1	ACT	domain
ACT_4	PF13291.6	gi|298674692|ref|YP_003726442.1|	-	0.00017	22.1	0.5	0.00017	22.1	0.5	1.9	2	1	0	2	2	2	1	ACT	domain
SLS	PF14611.6	gi|298674692|ref|YP_003726442.1|	-	0.041	13.7	3.1	0.45	10.3	3.3	1.9	1	1	1	2	2	2	0	Mitochondrial	inner-membrane-bound	regulator
NIL	PF09383.10	gi|298674692|ref|YP_003726442.1|	-	0.11	12.3	0.1	18	5.3	0.0	2.9	3	0	0	3	3	3	0	NIL	domain
IlvN	PF07991.12	gi|298674693|ref|YP_003726443.1|	-	2e-77	258.4	0.9	3.2e-77	257.8	0.9	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
IlvC	PF01450.19	gi|298674693|ref|YP_003726443.1|	-	2.9e-61	206.0	0.3	4.4e-61	205.4	0.3	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
2-Hacid_dh_C	PF02826.19	gi|298674693|ref|YP_003726443.1|	-	5.4e-07	29.1	0.0	1e-06	28.3	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|298674693|ref|YP_003726443.1|	-	1.6e-06	28.6	0.2	3.2e-06	27.6	0.2	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|298674693|ref|YP_003726443.1|	-	4.4e-06	26.9	0.0	9.6e-06	25.9	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.21	gi|298674693|ref|YP_003726443.1|	-	0.00069	19.7	0.0	0.0011	19.0	0.0	1.3	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
CoA_binding_2	PF13380.6	gi|298674693|ref|YP_003726443.1|	-	0.0087	16.5	0.1	0.023	15.2	0.1	1.7	1	1	0	1	1	1	1	CoA	binding	domain
ApbA	PF02558.16	gi|298674693|ref|YP_003726443.1|	-	0.01	15.5	0.2	0.018	14.7	0.2	1.5	1	1	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
CoA_binding	PF02629.19	gi|298674693|ref|YP_003726443.1|	-	0.027	15.1	0.1	0.063	14.0	0.1	1.6	1	0	0	1	1	1	0	CoA	binding	domain
Shikimate_DH	PF01488.20	gi|298674693|ref|YP_003726443.1|	-	0.083	12.9	0.0	0.16	12.0	0.0	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Oxidored_nitro	PF00148.19	gi|298674693|ref|YP_003726443.1|	-	0.11	11.1	0.0	0.29	9.8	0.0	1.6	2	1	0	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
NAD_Gly3P_dh_N	PF01210.23	gi|298674693|ref|YP_003726443.1|	-	0.17	11.9	0.3	2.2	8.2	0.5	2.2	1	1	1	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Nitroreductase	PF00881.24	gi|298674694|ref|YP_003726444.1|	-	2e-35	122.4	0.3	5.1e-19	68.9	0.0	2.1	1	1	1	2	2	2	2	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|298674694|ref|YP_003726444.1|	-	2.6e-17	63.1	0.2	5.1e-06	26.2	0.0	3.0	2	1	1	3	3	3	3	Putative	TM	nitroreductase
Topoisom_bac	PF01131.20	gi|298674695|ref|YP_003726445.1|	-	1.8e-113	379.7	0.4	2.4e-113	379.3	0.4	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
zf-C4_Topoisom	PF01396.19	gi|298674695|ref|YP_003726445.1|	-	1.5e-15	56.7	16.0	1.2e-10	41.0	2.2	3.1	3	0	0	3	3	3	2	Topoisomerase	DNA	binding	C4	zinc	finger
Toprim	PF01751.22	gi|298674695|ref|YP_003726445.1|	-	2.3e-14	53.5	0.1	1e-13	51.4	0.0	2.1	2	0	0	2	2	2	1	Toprim	domain
DUF2113	PF09886.9	gi|298674695|ref|YP_003726445.1|	-	0.061	12.7	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2113)
Rubredoxin_2	PF18073.1	gi|298674695|ref|YP_003726445.1|	-	0.29	10.9	3.5	7.4	6.4	0.1	3.4	3	0	0	3	3	3	0	Rubredoxin	metal	binding	domain
ThiC_Rad_SAM	PF01964.18	gi|298674697|ref|YP_003726447.1|	-	1.1e-182	607.5	0.4	1.2e-182	607.3	0.4	1.0	1	0	0	1	1	1	1	Radical	SAM	ThiC	family
SelR	PF01641.18	gi|298674699|ref|YP_003726449.1|	-	1.5e-58	196.1	0.2	1.7e-58	195.9	0.2	1.0	1	0	0	1	1	1	1	SelR	domain
Yippee-Mis18	PF03226.14	gi|298674699|ref|YP_003726449.1|	-	0.008	16.4	0.1	0.016	15.4	0.1	1.6	1	1	0	1	1	1	1	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
TF_Zn_Ribbon	PF08271.12	gi|298674699|ref|YP_003726449.1|	-	0.04	13.4	0.5	5.1	6.7	0.2	2.6	2	0	0	2	2	2	0	TFIIB	zinc-binding
Zn_ribbon_SprT	PF17283.2	gi|298674699|ref|YP_003726449.1|	-	0.041	13.8	0.6	2.6	8.0	0.1	2.3	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
ADD_ATRX	PF17981.1	gi|298674699|ref|YP_003726449.1|	-	0.053	13.4	0.1	13	5.8	0.0	2.2	2	0	0	2	2	2	0	Cysteine	Rich	ADD	domain
zinc_ribbon_10	PF10058.9	gi|298674699|ref|YP_003726449.1|	-	0.053	13.2	1.3	4.4	7.1	0.1	2.2	2	0	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Ribosomal_L37e	PF01907.19	gi|298674699|ref|YP_003726449.1|	-	0.066	13.4	2.3	4.1	7.7	0.2	2.3	2	0	0	2	2	2	0	Ribosomal	protein	L37e
Ribosomal_S27e	PF01667.17	gi|298674699|ref|YP_003726449.1|	-	0.081	12.7	0.4	0.96	9.2	0.1	2.2	2	0	0	2	2	2	0	Ribosomal	protein	S27
HECT_2	PF09814.9	gi|298674699|ref|YP_003726449.1|	-	0.085	11.7	0.3	1.6	7.5	0.1	2.0	1	1	1	2	2	2	0	HECT-like	Ubiquitin-conjugating	enzyme	(E2)-binding
zf-Mss51	PF13824.6	gi|298674699|ref|YP_003726449.1|	-	0.52	10.4	2.3	9.4	6.4	0.0	2.9	2	1	1	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Zn_Tnp_IS1595	PF12760.7	gi|298674699|ref|YP_003726449.1|	-	0.56	10.2	3.4	4.5	7.3	0.4	2.3	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
Glyco_hydro_67N	PF03648.14	gi|298674700|ref|YP_003726450.1|	-	0.13	12.5	0.0	0.14	12.5	0.0	1.0	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	67	N-terminus
Methyltransf_31	PF13847.6	gi|298674701|ref|YP_003726451.1|	-	2.9e-38	131.0	0.1	4.8e-38	130.3	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298674701|ref|YP_003726451.1|	-	3.8e-23	81.9	0.6	7.9e-23	80.9	0.0	1.8	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298674701|ref|YP_003726451.1|	-	2.5e-22	79.4	0.2	5.4e-22	78.3	0.0	1.7	2	0	0	2	2	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298674701|ref|YP_003726451.1|	-	4.8e-19	68.6	0.8	2.5e-18	66.3	0.3	2.2	1	1	1	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.12	gi|298674701|ref|YP_003726451.1|	-	4.2e-13	49.9	0.1	8.3e-13	48.9	0.1	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298674701|ref|YP_003726451.1|	-	1.9e-10	40.8	0.0	3.6e-10	39.9	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|298674701|ref|YP_003726451.1|	-	3e-10	40.2	0.0	4.8e-10	39.6	0.0	1.4	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PrmA	PF06325.13	gi|298674701|ref|YP_003726451.1|	-	6.8e-09	35.5	0.2	9.2e-09	35.1	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.14	gi|298674701|ref|YP_003726451.1|	-	6.3e-06	25.9	0.1	1.3e-05	24.8	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
UPF0020	PF01170.18	gi|298674701|ref|YP_003726451.1|	-	2e-05	24.4	0.1	8.5e-05	22.3	0.1	1.8	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
CMAS	PF02353.20	gi|298674701|ref|YP_003726451.1|	-	2.4e-05	23.8	0.0	3.3e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_8	PF05148.15	gi|298674701|ref|YP_003726451.1|	-	2.4e-05	24.3	0.5	5.2e-05	23.2	0.5	1.7	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_9	PF08003.11	gi|298674701|ref|YP_003726451.1|	-	0.00012	21.1	0.0	0.00027	20.0	0.0	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
Methyltransf_2	PF00891.18	gi|298674701|ref|YP_003726451.1|	-	0.0018	17.6	0.0	0.0026	17.1	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase	domain
Methyltransf_32	PF13679.6	gi|298674701|ref|YP_003726451.1|	-	0.0022	18.0	0.0	0.0041	17.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Fibrillarin	PF01269.17	gi|298674701|ref|YP_003726451.1|	-	0.0041	16.3	0.0	0.015	14.4	0.0	1.9	2	0	0	2	2	2	1	Fibrillarin
DREV	PF05219.12	gi|298674701|ref|YP_003726451.1|	-	0.0054	15.9	0.1	0.0074	15.4	0.1	1.2	1	0	0	1	1	1	1	DREV	methyltransferase
Methyltransf_4	PF02390.17	gi|298674701|ref|YP_003726451.1|	-	0.0075	15.8	0.0	0.019	14.4	0.0	1.7	2	0	0	2	2	2	1	Putative	methyltransferase
ADH_zinc_N	PF00107.26	gi|298674701|ref|YP_003726451.1|	-	0.011	15.7	0.0	0.023	14.7	0.0	1.6	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
Met_10	PF02475.16	gi|298674701|ref|YP_003726451.1|	-	0.037	13.8	0.1	0.061	13.1	0.1	1.4	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_3	PF01596.17	gi|298674701|ref|YP_003726451.1|	-	0.057	12.6	0.0	0.081	12.1	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase
CheR	PF01739.18	gi|298674701|ref|YP_003726451.1|	-	0.091	12.2	0.2	0.58	9.6	0.1	2.1	1	1	1	2	2	2	0	CheR	methyltransferase,	SAM	binding	domain
TehB	PF03848.14	gi|298674701|ref|YP_003726451.1|	-	0.11	11.9	0.7	0.21	11.0	0.4	1.5	1	1	0	1	1	1	0	Tellurite	resistance	protein	TehB
Pyr_redox_2	PF07992.14	gi|298674702|ref|YP_003726452.1|	-	1.8e-54	185.0	0.5	2.2e-54	184.7	0.5	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|298674702|ref|YP_003726452.1|	-	1.9e-21	76.4	0.0	3e-21	75.7	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.27	gi|298674702|ref|YP_003726452.1|	-	1.1e-18	67.6	1.5	2.6e-14	53.5	0.1	3.3	4	0	0	4	4	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|298674702|ref|YP_003726452.1|	-	1.1e-12	47.8	1.7	2.4e-10	40.1	0.1	2.1	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|298674702|ref|YP_003726452.1|	-	4.3e-09	35.6	0.5	0.0019	17.0	0.1	3.0	3	0	0	3	3	3	2	HI0933-like	protein
FAD_binding_2	PF00890.24	gi|298674702|ref|YP_003726452.1|	-	9.9e-07	28.2	0.8	1.7e-05	24.1	0.6	2.3	2	0	0	2	2	2	1	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|298674702|ref|YP_003726452.1|	-	1.5e-06	27.9	0.0	0.002	17.5	0.0	2.4	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
DAO	PF01266.24	gi|298674702|ref|YP_003726452.1|	-	2.2e-05	24.2	3.8	0.00062	19.4	3.8	2.5	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|298674702|ref|YP_003726452.1|	-	0.00017	21.8	0.2	0.0011	19.1	0.1	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
AlaDh_PNT_C	PF01262.21	gi|298674702|ref|YP_003726452.1|	-	0.00026	20.4	0.6	0.033	13.5	0.2	2.4	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
GIDA	PF01134.22	gi|298674702|ref|YP_003726452.1|	-	0.0003	20.0	1.7	0.0019	17.4	0.6	2.4	2	1	0	2	2	2	1	Glucose	inhibited	division	protein	A
3HCDH_N	PF02737.18	gi|298674702|ref|YP_003726452.1|	-	0.0019	18.1	0.2	0.05	13.5	0.0	2.3	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.12	gi|298674702|ref|YP_003726452.1|	-	0.014	14.4	0.1	0.025	13.6	0.1	1.4	1	0	0	1	1	1	0	Lycopene	cyclase	protein
F420_oxidored	PF03807.17	gi|298674702|ref|YP_003726452.1|	-	0.016	15.8	0.2	1.2	9.7	0.1	2.8	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.18	gi|298674702|ref|YP_003726452.1|	-	0.025	14.8	0.0	0.1	12.9	0.0	2.1	1	0	0	1	1	1	0	TrkA-N	domain
Thi4	PF01946.17	gi|298674702|ref|YP_003726452.1|	-	0.053	12.8	0.1	0.16	11.2	0.1	1.9	1	0	0	1	1	1	0	Thi4	family
FAD_binding_3	PF01494.19	gi|298674702|ref|YP_003726452.1|	-	0.068	12.4	0.0	0.25	10.6	0.0	1.8	2	0	0	2	2	2	0	FAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|298674702|ref|YP_003726452.1|	-	0.083	12.3	0.1	0.43	9.9	0.0	2.1	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
K_oxygenase	PF13434.6	gi|298674702|ref|YP_003726452.1|	-	0.14	11.2	0.4	44	3.1	0.0	3.0	2	1	1	3	3	3	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Trp_halogenase	PF04820.14	gi|298674702|ref|YP_003726452.1|	-	0.2	10.5	1.1	1.1	8.0	0.1	2.0	2	0	0	2	2	2	0	Tryptophan	halogenase
PBP	PF01161.20	gi|298674703|ref|YP_003726453.1|	-	4.3e-40	137.1	0.0	5e-40	136.9	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
Pribosyltran	PF00156.27	gi|298674704|ref|YP_003726454.1|	-	8.2e-23	80.7	0.0	1.9e-22	79.5	0.0	1.5	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|298674704|ref|YP_003726454.1|	-	0.011	15.2	0.2	0.015	14.7	0.2	1.4	1	1	0	1	1	1	0	Uracil	phosphoribosyltransferase
DREV	PF05219.12	gi|298674704|ref|YP_003726454.1|	-	0.016	14.3	0.0	0.029	13.5	0.0	1.4	1	0	0	1	1	1	0	DREV	methyltransferase
Unstab_antitox	PF09720.10	gi|298674704|ref|YP_003726454.1|	-	0.028	14.5	0.3	0.059	13.4	0.3	1.4	1	0	0	1	1	1	0	Putative	addiction	module	component
adh_short	PF00106.25	gi|298674705|ref|YP_003726455.1|	-	1.4e-62	210.6	0.3	1.6e-62	210.4	0.3	1.0	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|298674705|ref|YP_003726455.1|	-	3.7e-48	164.1	0.0	5.7e-48	163.5	0.0	1.3	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.10	gi|298674705|ref|YP_003726455.1|	-	3.7e-14	53.0	0.1	4.7e-14	52.7	0.1	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|298674705|ref|YP_003726455.1|	-	0.0014	18.1	0.0	0.0036	16.8	0.0	1.7	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|298674705|ref|YP_003726455.1|	-	0.017	14.1	0.3	0.022	13.8	0.3	1.3	1	1	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|298674705|ref|YP_003726455.1|	-	0.023	13.9	0.1	0.025	13.7	0.1	1.2	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
Pyr_redox_dim	PF02852.22	gi|298674705|ref|YP_003726455.1|	-	0.029	14.6	0.0	0.15	12.3	0.0	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Methyltransf_31	PF13847.6	gi|298674706|ref|YP_003726456.1|	-	4.8e-20	71.9	0.0	6.1e-20	71.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298674706|ref|YP_003726456.1|	-	5.2e-18	65.5	0.0	7.6e-18	65.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298674706|ref|YP_003726456.1|	-	4.7e-16	59.2	0.0	7.5e-16	58.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298674706|ref|YP_003726456.1|	-	1.6e-15	57.1	0.0	2.1e-15	56.7	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|298674706|ref|YP_003726456.1|	-	3.7e-12	46.4	0.0	4.5e-12	46.1	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|298674706|ref|YP_003726456.1|	-	1.5e-11	44.9	0.0	2.2e-11	44.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|298674706|ref|YP_003726456.1|	-	3.1e-09	36.9	0.0	3.9e-09	36.6	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
CMAS	PF02353.20	gi|298674706|ref|YP_003726456.1|	-	4.2e-09	36.1	0.0	5.2e-09	35.8	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
PrmA	PF06325.13	gi|298674706|ref|YP_003726456.1|	-	6.3e-09	35.6	0.0	8.4e-09	35.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.14	gi|298674706|ref|YP_003726456.1|	-	2.8e-08	33.5	0.0	3.8e-08	33.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
FtsJ	PF01728.19	gi|298674706|ref|YP_003726456.1|	-	1e-06	29.0	0.0	1.2e-06	28.8	0.0	1.3	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_16	PF10294.9	gi|298674706|ref|YP_003726456.1|	-	3.8e-06	26.8	0.0	4.7e-06	26.4	0.0	1.1	1	0	0	1	1	1	1	Lysine	methyltransferase
Methyltransf_18	PF12847.7	gi|298674706|ref|YP_003726456.1|	-	4.3e-06	26.7	0.0	7e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|298674706|ref|YP_003726456.1|	-	6.2e-06	26.0	0.0	9.3e-06	25.4	0.0	1.2	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
TehB	PF03848.14	gi|298674706|ref|YP_003726456.1|	-	1.7e-05	24.3	0.0	2.3e-05	23.9	0.0	1.1	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Met_10	PF02475.16	gi|298674706|ref|YP_003726456.1|	-	7.2e-05	22.6	0.1	8.5e-05	22.4	0.1	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
GCD14	PF08704.10	gi|298674706|ref|YP_003726456.1|	-	0.0001	22.1	0.0	0.00013	21.7	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
RrnaAD	PF00398.20	gi|298674706|ref|YP_003726456.1|	-	0.00029	20.0	0.0	0.00035	19.7	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Fibrillarin	PF01269.17	gi|298674706|ref|YP_003726456.1|	-	0.00041	19.5	0.0	0.00072	18.7	0.0	1.3	1	0	0	1	1	1	1	Fibrillarin
Rsm22	PF09243.10	gi|298674706|ref|YP_003726456.1|	-	0.0034	16.7	0.0	0.0043	16.4	0.0	1.1	1	0	0	1	1	1	1	Mitochondrial	small	ribosomal	subunit	Rsm22
Methyltransf_15	PF09445.10	gi|298674706|ref|YP_003726456.1|	-	0.0037	16.8	0.0	0.013	15.1	0.1	1.7	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
NNMT_PNMT_TEMT	PF01234.17	gi|298674706|ref|YP_003726456.1|	-	0.004	16.4	0.0	0.045	12.9	0.0	1.9	1	1	1	2	2	2	1	NNMT/PNMT/TEMT	family
Methyltransf_3	PF01596.17	gi|298674706|ref|YP_003726456.1|	-	0.0042	16.3	0.0	0.0052	16.0	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
N6_N4_Mtase	PF01555.18	gi|298674706|ref|YP_003726456.1|	-	0.0054	16.5	0.0	0.017	14.8	0.0	1.7	2	0	0	2	2	2	1	DNA	methylase
Methyltransf_4	PF02390.17	gi|298674706|ref|YP_003726456.1|	-	0.006	16.1	0.0	0.0094	15.4	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_9	PF08003.11	gi|298674706|ref|YP_003726456.1|	-	0.0096	14.9	0.0	0.0096	14.9	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
Methyltransf_32	PF13679.6	gi|298674706|ref|YP_003726456.1|	-	0.016	15.2	0.0	0.017	15.1	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
UPF0020	PF01170.18	gi|298674706|ref|YP_003726456.1|	-	0.046	13.4	0.3	0.39	10.4	0.3	2.2	1	1	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
DREV	PF05219.12	gi|298674706|ref|YP_003726456.1|	-	0.16	11.0	0.0	0.19	10.8	0.0	1.2	1	0	0	1	1	1	0	DREV	methyltransferase
RRXRR	PF14239.6	gi|298674707|ref|YP_003726457.1|	-	1.1e-63	214.3	3.4	1.6e-63	213.7	3.4	1.3	1	0	0	1	1	1	1	RRXRR	protein
HNH	PF01844.23	gi|298674707|ref|YP_003726457.1|	-	7.3e-11	42.1	8.0	1.6e-10	41.0	8.0	1.6	1	0	0	1	1	1	1	HNH	endonuclease
HNH_5	PF14279.6	gi|298674707|ref|YP_003726457.1|	-	9.1e-07	28.6	5.3	2.1e-06	27.5	5.3	1.6	1	0	0	1	1	1	1	HNH	endonuclease
HNH_2	PF13391.6	gi|298674707|ref|YP_003726457.1|	-	0.00022	21.3	0.5	0.00099	19.2	0.5	2.1	1	1	0	1	1	1	1	HNH	endonuclease
zf_UBZ	PF18439.1	gi|298674707|ref|YP_003726457.1|	-	9.9	5.9	7.4	1.3	8.6	2.8	1.9	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
HisKA_2	PF07568.12	gi|298674708|ref|YP_003726458.1|	-	1.9e-28	98.4	5.1	3.7e-28	97.4	5.1	1.5	1	0	0	1	1	1	1	Histidine	kinase
HATPase_c	PF02518.26	gi|298674708|ref|YP_003726458.1|	-	1.7e-09	38.2	2.2	2.2e-08	34.6	1.1	2.7	1	1	1	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HWE_HK	PF07536.14	gi|298674708|ref|YP_003726458.1|	-	4.9e-07	30.3	0.2	7.5e-07	29.8	0.2	1.3	1	0	0	1	1	1	1	HWE	histidine	kinase
HATPase_c_2	PF13581.6	gi|298674708|ref|YP_003726458.1|	-	0.00062	19.7	0.0	0.0011	18.9	0.0	1.4	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
HATPase_c_3	PF13589.6	gi|298674708|ref|YP_003726458.1|	-	0.0017	18.2	0.4	0.0032	17.3	0.4	1.4	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Met_synt_B12	PF02965.17	gi|298674708|ref|YP_003726458.1|	-	0.16	11.4	0.1	0.2	11.1	0.1	1.1	1	0	0	1	1	1	0	Vitamin	B12	dependent	methionine	synthase,	activation	domain
CMD	PF02627.20	gi|298674709|ref|YP_003726459.1|	-	5.2e-12	45.7	0.0	5.7e-12	45.5	0.0	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
DNA_pol3_delta	PF06144.13	gi|298674709|ref|YP_003726459.1|	-	0.1	12.4	0.0	0.11	12.2	0.0	1.0	1	0	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
Rhomboid	PF01694.22	gi|298674710|ref|YP_003726460.1|	-	1.4e-05	25.1	15.6	0.0023	18.0	9.8	2.6	2	1	0	2	2	2	2	Rhomboid	family
DUF1724	PF08350.10	gi|298674711|ref|YP_003726461.1|	-	6.5e-22	77.4	0.1	1.5e-21	76.3	0.1	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1724)
HTH_11	PF08279.12	gi|298674711|ref|YP_003726461.1|	-	0.013	15.4	0.3	0.028	14.3	0.3	1.5	1	0	0	1	1	1	0	HTH	domain
HTH_5	PF01022.20	gi|298674712|ref|YP_003726462.1|	-	1.2e-11	44.3	0.1	1.7e-11	43.8	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|298674712|ref|YP_003726462.1|	-	8e-11	41.8	0.0	1.2e-10	41.3	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.14	gi|298674712|ref|YP_003726462.1|	-	3.1e-05	23.8	0.3	0.00011	22.1	0.3	1.8	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_11	PF08279.12	gi|298674712|ref|YP_003726462.1|	-	4.1e-05	23.4	0.1	6.5e-05	22.8	0.1	1.3	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.19	gi|298674712|ref|YP_003726462.1|	-	4.9e-05	23.1	0.1	6.9e-05	22.7	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.6	gi|298674712|ref|YP_003726462.1|	-	0.0008	19.5	0.3	0.0011	19.1	0.3	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.6	gi|298674712|ref|YP_003726462.1|	-	0.00096	18.7	0.0	0.0017	17.9	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_Tnp_1_2	PF13022.6	gi|298674712|ref|YP_003726462.1|	-	0.001	19.2	0.1	0.0014	18.8	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	of	insertion	element	transposase
MarR	PF01047.22	gi|298674712|ref|YP_003726462.1|	-	0.0013	18.6	0.0	0.0021	18.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_23	PF13384.6	gi|298674712|ref|YP_003726462.1|	-	0.0029	17.4	0.1	0.0049	16.6	0.1	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR_2	PF12802.7	gi|298674712|ref|YP_003726462.1|	-	0.0065	16.3	0.0	0.0086	15.9	0.0	1.2	1	0	0	1	1	1	1	MarR	family
Mga	PF05043.13	gi|298674712|ref|YP_003726462.1|	-	0.0068	17.0	0.2	0.012	16.2	0.2	1.5	1	1	0	1	1	1	1	Mga	helix-turn-helix	domain
Rrf2	PF02082.20	gi|298674712|ref|YP_003726462.1|	-	0.011	16.1	0.0	0.016	15.5	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_26	PF13443.6	gi|298674712|ref|YP_003726462.1|	-	0.02	15.3	0.0	0.053	14.0	0.0	1.7	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_29	PF13551.6	gi|298674712|ref|YP_003726462.1|	-	0.037	14.1	0.1	0.066	13.2	0.1	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
HxlR	PF01638.17	gi|298674712|ref|YP_003726462.1|	-	0.044	13.6	0.1	0.06	13.2	0.1	1.3	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_10	PF04967.12	gi|298674712|ref|YP_003726462.1|	-	0.065	13.0	0.0	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_8	PF02954.19	gi|298674712|ref|YP_003726462.1|	-	0.074	12.8	0.3	0.12	12.1	0.3	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
TssO	PF17561.2	gi|298674713|ref|YP_003726463.1|	-	7.2e-06	26.2	0.4	8.2e-06	26.0	0.4	1.0	1	0	0	1	1	1	1	Type	VI	secretion	system,	TssO
DUF4577	PF15145.6	gi|298674713|ref|YP_003726463.1|	-	0.0013	18.8	0.0	0.0014	18.6	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4577)
Prominin	PF05478.11	gi|298674713|ref|YP_003726463.1|	-	0.0028	15.7	0.0	0.0033	15.5	0.0	1.0	1	0	0	1	1	1	1	Prominin
DUF5385	PF17359.2	gi|298674713|ref|YP_003726463.1|	-	0.0038	16.8	1.7	0.0045	16.6	1.7	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5385)
PspB	PF06667.12	gi|298674713|ref|YP_003726463.1|	-	0.0041	17.2	0.0	0.0053	16.8	0.0	1.1	1	0	0	1	1	1	1	Phage	shock	protein	B
MscL	PF01741.18	gi|298674713|ref|YP_003726463.1|	-	0.0049	17.1	0.2	0.0056	17.0	0.2	1.0	1	0	0	1	1	1	1	Large-conductance	mechanosensitive	channel,	MscL
FixQ	PF05545.11	gi|298674713|ref|YP_003726463.1|	-	0.0065	16.4	0.0	0.0093	15.9	0.0	1.3	1	0	0	1	1	1	1	Cbb3-type	cytochrome	oxidase	component	FixQ
Holin_BhlA	PF10960.8	gi|298674713|ref|YP_003726463.1|	-	0.011	15.6	1.6	0.014	15.4	1.6	1.2	1	0	0	1	1	1	0	BhlA	holin	family
UPF0242	PF06785.11	gi|298674713|ref|YP_003726463.1|	-	0.014	15.6	0.2	0.015	15.4	0.2	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
UPF0239	PF06783.11	gi|298674713|ref|YP_003726463.1|	-	0.015	15.4	0.0	0.018	15.2	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0239)
ODV-E18	PF10717.9	gi|298674713|ref|YP_003726463.1|	-	0.016	15.0	0.3	0.02	14.8	0.3	1.1	1	0	0	1	1	1	0	Occlusion-derived	virus	envelope	protein	ODV-E18
DUF1664	PF07889.12	gi|298674713|ref|YP_003726463.1|	-	0.021	14.9	1.4	0.021	14.9	1.4	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Trimer_CC	PF08954.11	gi|298674713|ref|YP_003726463.1|	-	0.024	14.2	0.1	0.028	14.0	0.1	1.1	1	0	0	1	1	1	0	Trimerisation	motif
KxDL	PF10241.9	gi|298674713|ref|YP_003726463.1|	-	0.025	14.9	0.2	0.029	14.6	0.2	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein
BLOC1_2	PF10046.9	gi|298674713|ref|YP_003726463.1|	-	0.025	14.8	0.8	0.029	14.6	0.8	1.1	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Chordopox_A13L	PF05961.11	gi|298674713|ref|YP_003726463.1|	-	0.034	14.4	0.1	0.041	14.1	0.1	1.2	1	0	0	1	1	1	0	Chordopoxvirus	A13L	protein
SLATT_6	PF18169.1	gi|298674713|ref|YP_003726463.1|	-	0.054	13.1	0.4	0.065	12.8	0.4	1.1	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	6
FlaC_arch	PF05377.11	gi|298674713|ref|YP_003726463.1|	-	0.054	13.9	3.4	0.078	13.4	3.4	1.3	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
CbiN	PF02553.15	gi|298674713|ref|YP_003726463.1|	-	0.065	13.2	0.0	0.076	13.0	0.0	1.3	1	0	0	1	1	1	0	Cobalt	transport	protein	component	CbiN
Tetraspanin	PF00335.20	gi|298674713|ref|YP_003726463.1|	-	0.073	12.8	0.0	0.081	12.6	0.0	1.0	1	0	0	1	1	1	0	Tetraspanin	family
Lig_chan	PF00060.26	gi|298674713|ref|YP_003726463.1|	-	0.08	12.8	0.0	0.084	12.7	0.0	1.1	1	0	0	1	1	1	0	Ligand-gated	ion	channel
HN	PF00423.19	gi|298674713|ref|YP_003726463.1|	-	0.085	11.6	0.3	0.1	11.4	0.3	1.0	1	0	0	1	1	1	0	Haemagglutinin-neuraminidase
60KD_IMP	PF02096.20	gi|298674713|ref|YP_003726463.1|	-	0.098	12.6	0.2	0.13	12.2	0.2	1.2	1	0	0	1	1	1	0	60Kd	inner	membrane	protein
APC_N_CC	PF16689.5	gi|298674713|ref|YP_003726463.1|	-	0.17	11.9	2.8	0.22	11.6	2.8	1.1	1	0	0	1	1	1	0	Coiled-coil	N-terminus	of	APC,	dimerisation	domain
SPT_ssu-like	PF11779.8	gi|298674713|ref|YP_003726463.1|	-	0.33	10.6	2.3	0.44	10.2	2.3	1.1	1	0	0	1	1	1	0	Small	subunit	of	serine	palmitoyltransferase-like
PV-1	PF06637.11	gi|298674713|ref|YP_003726463.1|	-	0.45	9.3	3.5	0.72	8.6	3.5	1.4	1	1	0	1	1	1	0	PV-1	protein	(PLVAP)
CorA	PF01544.18	gi|298674713|ref|YP_003726463.1|	-	3.2	7.0	9.1	3	7.1	0.9	2.0	1	1	1	2	2	2	0	CorA-like	Mg2+	transporter	protein
ThrE	PF06738.12	gi|298674713|ref|YP_003726463.1|	-	6.4	6.1	5.5	3.7	6.8	0.3	1.9	1	1	1	2	2	2	0	Putative	threonine/serine	exporter
Gate	PF07670.14	gi|298674715|ref|YP_003726465.1|	-	4.9e-06	26.8	15.9	5.1e-05	23.5	0.1	3.2	2	2	1	3	3	3	2	Nucleoside	recognition
Fer4	PF00037.27	gi|298674716|ref|YP_003726466.1|	-	1.9e-17	62.3	21.1	7.4e-09	35.1	6.1	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298674716|ref|YP_003726466.1|	-	9.9e-12	44.8	26.9	7.6e-09	35.6	14.9	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298674716|ref|YP_003726466.1|	-	1.2e-11	44.2	21.9	5.9e-06	26.1	6.4	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298674716|ref|YP_003726466.1|	-	2.2e-11	43.7	17.3	7.8e-11	41.9	17.3	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298674716|ref|YP_003726466.1|	-	7.2e-11	42.5	12.7	1.2e-10	41.8	12.7	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674716|ref|YP_003726466.1|	-	1e-10	41.0	16.3	1.1e-05	25.3	4.4	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298674716|ref|YP_003726466.1|	-	2.6e-10	40.3	12.2	3.3e-10	40.0	12.2	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674716|ref|YP_003726466.1|	-	8.6e-10	39.4	11.7	5.8e-05	23.9	1.1	2.0	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|298674716|ref|YP_003726466.1|	-	1.7e-08	34.3	14.1	0.00046	20.5	4.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|298674716|ref|YP_003726466.1|	-	7.5e-07	29.7	17.4	0.0017	19.2	5.3	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|298674716|ref|YP_003726466.1|	-	8.5e-06	26.4	19.1	0.0027	18.4	19.1	2.9	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.6	gi|298674716|ref|YP_003726466.1|	-	0.00017	22.0	14.6	0.061	13.8	14.6	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298674716|ref|YP_003726466.1|	-	0.00021	21.7	22.7	0.019	15.5	7.7	2.6	2	2	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|298674716|ref|YP_003726466.1|	-	0.00025	21.5	12.5	0.015	15.8	2.0	2.1	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298674716|ref|YP_003726466.1|	-	0.0018	19.1	6.9	0.12	13.3	0.9	2.0	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298674716|ref|YP_003726466.1|	-	0.0031	17.7	16.0	0.0068	16.6	4.5	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
AFP	PF02420.15	gi|298674716|ref|YP_003726466.1|	-	7.5	7.3	12.2	20	5.9	2.5	2.9	2	1	1	3	3	3	0	Insect	antifreeze	protein	repeat
DUF2070	PF09843.9	gi|298674717|ref|YP_003726467.1|	-	1.3e-72	244.9	5.3	1.6e-72	244.6	5.3	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
Rep_fac-A_3	PF08661.11	gi|298674717|ref|YP_003726467.1|	-	0.16	12.3	0.2	0.33	11.3	0.2	1.4	1	0	0	1	1	1	0	Replication	factor	A	protein	3
TCR_zetazeta	PF11628.8	gi|298674717|ref|YP_003726467.1|	-	0.18	11.5	7.2	4.6	7.0	1.1	3.3	2	0	0	2	2	2	0	T-cell	surface	glycoprotein	CD3	zeta	chain
Ribonuc_red_lgC	PF02867.15	gi|298674718|ref|YP_003726468.1|	-	1.2e-172	575.1	1.5	4.6e-171	569.9	1.5	2.2	1	1	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.21	gi|298674718|ref|YP_003726468.1|	-	2.9e-28	97.7	0.1	6.6e-28	96.5	0.1	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.16	gi|298674718|ref|YP_003726468.1|	-	5.6e-23	81.3	1.9	1.7e-22	79.8	1.9	1.9	1	0	0	1	1	1	1	ATP	cone	domain
RA	PF00788.23	gi|298674718|ref|YP_003726468.1|	-	0.079	13.6	0.2	1.8	9.3	0.1	2.4	2	0	0	2	2	2	0	Ras	association	(RalGDS/AF-6)	domain
Ribosomal_S10	PF00338.22	gi|298674719|ref|YP_003726469.1|	-	2.6e-27	94.9	0.0	2.9e-27	94.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
PriA_C	PF18074.1	gi|298674719|ref|YP_003726469.1|	-	0.039	14.8	0.0	0.1	13.4	0.0	1.6	2	0	0	2	2	2	0	Primosomal	protein	N	C-terminal	domain
GTP_EFTU	PF00009.27	gi|298674720|ref|YP_003726470.1|	-	1.6e-56	190.9	0.0	2.3e-56	190.4	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.17	gi|298674720|ref|YP_003726470.1|	-	2.4e-37	127.7	0.1	5.6e-37	126.5	0.1	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.25	gi|298674720|ref|YP_003726470.1|	-	6.5e-16	58.5	1.0	1.7e-15	57.2	1.0	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|298674720|ref|YP_003726470.1|	-	3.6e-06	27.1	0.0	8.6e-05	22.6	0.0	2.4	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Gtr1_RagA	PF04670.12	gi|298674720|ref|YP_003726470.1|	-	0.00022	20.7	0.0	0.0092	15.3	0.0	2.2	1	1	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
GTP_EFTU_D4	PF14578.6	gi|298674720|ref|YP_003726470.1|	-	0.00081	19.2	0.5	0.002	18.0	0.5	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
FeoB_N	PF02421.18	gi|298674720|ref|YP_003726470.1|	-	0.017	14.7	0.2	0.47	10.0	0.2	2.6	2	1	0	2	2	2	0	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.23	gi|298674720|ref|YP_003726470.1|	-	0.032	14.3	0.1	10	6.1	0.0	2.8	2	1	1	3	3	3	0	Dynamin	family
Roc	PF08477.13	gi|298674720|ref|YP_003726470.1|	-	0.071	13.3	0.1	12	6.2	0.0	2.4	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_14	PF13173.6	gi|298674720|ref|YP_003726470.1|	-	0.14	12.2	0.0	0.39	10.7	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
GTP_EFTU	PF00009.27	gi|298674721|ref|YP_003726471.1|	-	7.9e-65	218.0	0.3	1.3e-64	217.3	0.3	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.18	gi|298674721|ref|YP_003726471.1|	-	4.6e-30	103.9	0.1	2.3e-29	101.6	0.0	2.3	3	0	0	3	3	3	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.6	gi|298674721|ref|YP_003726471.1|	-	5.2e-24	84.1	0.4	5.2e-24	84.1	0.4	2.0	2	0	0	2	2	2	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.24	gi|298674721|ref|YP_003726471.1|	-	8.5e-23	80.2	0.0	2.4e-22	78.8	0.0	1.8	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.25	gi|298674721|ref|YP_003726471.1|	-	1.2e-15	57.6	0.7	3e-15	56.4	0.7	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|298674721|ref|YP_003726471.1|	-	6.6e-05	23.0	0.1	0.00022	21.3	0.1	1.9	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
SRPRB	PF09439.10	gi|298674721|ref|YP_003726471.1|	-	0.017	14.5	0.1	0.32	10.4	0.1	2.7	2	1	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
RF3_C	PF16658.5	gi|298674721|ref|YP_003726471.1|	-	0.031	14.1	0.0	0.073	12.9	0.0	1.7	1	0	0	1	1	1	0	Class	II	release	factor	RF3,	C-terminal	domain
Septin	PF00735.18	gi|298674721|ref|YP_003726471.1|	-	0.033	13.5	0.2	0.061	12.6	0.2	1.3	1	0	0	1	1	1	0	Septin
Ras	PF00071.22	gi|298674721|ref|YP_003726471.1|	-	0.094	12.3	0.1	0.18	11.4	0.1	1.4	1	0	0	1	1	1	0	Ras	family
DUF4473	PF14747.6	gi|298674721|ref|YP_003726471.1|	-	0.13	12.8	0.0	0.74	10.4	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4473)
RsgA_GTPase	PF03193.16	gi|298674721|ref|YP_003726471.1|	-	0.36	10.7	1.8	0.44	10.4	0.3	1.9	3	0	0	3	3	3	0	RsgA	GTPase
Ribosomal_S7	PF00177.21	gi|298674722|ref|YP_003726472.1|	-	1.4e-34	118.9	2.6	1.7e-34	118.6	2.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
DUF1727	PF08353.10	gi|298674722|ref|YP_003726472.1|	-	0.13	12.2	0.2	0.89	9.5	0.1	2.3	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF1727)
Ribosom_S12_S23	PF00164.25	gi|298674723|ref|YP_003726473.1|	-	1.6e-44	150.1	0.3	2.1e-44	149.8	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
KH_2	PF07650.17	gi|298674724|ref|YP_003726474.1|	-	7.3e-19	67.4	2.2	3.2e-14	52.5	0.2	2.1	1	1	1	2	2	2	2	KH	domain
KH_5	PF13184.6	gi|298674724|ref|YP_003726474.1|	-	2.5e-16	59.5	2.5	7.5e-15	54.8	0.4	2.3	2	0	0	2	2	2	2	NusA-like	KH	domain
KH_4	PF13083.6	gi|298674724|ref|YP_003726474.1|	-	2.1e-05	24.3	0.4	0.035	14.0	0.0	2.2	2	0	0	2	2	2	2	KH	domain
KH_1	PF00013.29	gi|298674724|ref|YP_003726474.1|	-	0.0013	18.5	2.7	0.3	11.0	0.2	2.7	2	1	1	3	3	3	2	KH	domain
Ribosomal_L7Ae	PF01248.26	gi|298674725|ref|YP_003726475.1|	-	9.2e-14	51.0	0.0	1.2e-13	50.6	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
BRCA-2_OB1	PF09103.10	gi|298674725|ref|YP_003726475.1|	-	0.023	14.6	0.1	0.03	14.3	0.1	1.1	1	0	0	1	1	1	0	BRCA2,	oligonucleotide/oligosaccharide-binding,	domain	1
BRCT_3	PF18428.1	gi|298674725|ref|YP_003726475.1|	-	0.028	14.5	0.1	0.032	14.3	0.1	1.1	1	0	0	1	1	1	0	BRCA1	C	Terminus	(BRCT)	domain
RNA_pol_Rpb1_5	PF04998.17	gi|298674726|ref|YP_003726476.1|	-	3.4e-57	193.9	1.9	4.6e-57	193.5	1.9	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
Peptidase_M24	PF00557.24	gi|298674726|ref|YP_003726476.1|	-	0.0037	17.0	0.2	0.012	15.3	0.1	1.9	2	0	0	2	2	2	1	Metallopeptidase	family	M24
RNA_pol_Rpb1_1	PF04997.12	gi|298674727|ref|YP_003726477.1|	-	1.9e-104	349.4	0.0	6.2e-104	347.7	0.0	1.8	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.20	gi|298674727|ref|YP_003726477.1|	-	3.5e-70	235.5	0.2	7.5e-70	234.5	0.2	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.18	gi|298674727|ref|YP_003726477.1|	-	2.4e-35	121.8	0.0	8e-35	120.1	0.0	1.9	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.17	gi|298674727|ref|YP_003726477.1|	-	2.2e-30	104.8	0.0	5.8e-30	103.4	0.0	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.17	gi|298674727|ref|YP_003726477.1|	-	3.2e-28	98.9	0.0	6.3e-28	97.9	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb2_6	PF00562.28	gi|298674728|ref|YP_003726478.1|	-	1.1e-123	413.1	0.0	1.5e-123	412.8	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_7	PF04560.20	gi|298674728|ref|YP_003726478.1|	-	2.8e-30	104.6	0.4	6.5e-30	103.4	0.4	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_4	PF04566.13	gi|298674728|ref|YP_003726478.1|	-	4.7e-22	78.0	1.2	9.3e-22	77.1	1.2	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.17	gi|298674728|ref|YP_003726478.1|	-	6.5e-11	42.6	1.9	2.4e-10	40.8	1.9	2.0	1	1	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
RNA_pol_Rpb2_45	PF10385.9	gi|298674728|ref|YP_003726478.1|	-	0.02	15.2	0.5	0.32	11.3	0.2	2.6	2	0	0	2	2	2	0	RNA	polymerase	beta	subunit	external	1	domain
Auto_anti-p27	PF06677.12	gi|298674728|ref|YP_003726478.1|	-	0.12	12.6	1.7	0.23	11.6	1.7	1.5	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF1451	PF07295.11	gi|298674728|ref|YP_003726478.1|	-	0.19	11.8	0.7	0.36	10.9	0.7	1.4	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
OrfB_Zn_ribbon	PF07282.11	gi|298674728|ref|YP_003726478.1|	-	0.2	11.6	1.1	0.41	10.6	1.1	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
YflT	PF11181.8	gi|298674728|ref|YP_003726478.1|	-	0.73	10.4	2.8	49	4.5	0.1	3.3	3	0	0	3	3	3	0	Heat	induced	stress	protein	YflT
RNA_pol_Rpb2_1	PF04563.15	gi|298674729|ref|YP_003726479.1|	-	3e-55	186.9	0.3	3.9e-55	186.5	0.3	1.1	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_3	PF04565.16	gi|298674729|ref|YP_003726479.1|	-	1.4e-26	92.5	0.0	2.3e-26	91.7	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_2	PF04561.14	gi|298674729|ref|YP_003726479.1|	-	2.7e-26	92.4	0.0	4.7e-26	91.6	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb5_C	PF01191.19	gi|298674730|ref|YP_003726480.1|	-	1.1e-28	98.9	0.4	1.2e-28	98.7	0.4	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
Lzipper-MIP1	PF14389.6	gi|298674730|ref|YP_003726480.1|	-	0.068	13.5	0.1	0.076	13.3	0.1	1.2	1	0	0	1	1	1	0	Leucine-zipper	of	ternary	complex	factor	MIP1
AdoHcyase	PF05221.17	gi|298674731|ref|YP_003726481.1|	-	5.4e-59	199.8	0.0	7.9e-31	107.3	0.0	2.0	1	1	1	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.21	gi|298674731|ref|YP_003726481.1|	-	2.2e-46	157.9	1.7	2.2e-46	157.9	1.7	1.8	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|298674731|ref|YP_003726481.1|	-	2.7e-10	39.9	0.1	6.3e-10	38.7	0.1	1.6	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|298674731|ref|YP_003726481.1|	-	7e-06	25.7	0.1	1.7e-05	24.5	0.1	1.6	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
AlaDh_PNT_C	PF01262.21	gi|298674731|ref|YP_003726481.1|	-	0.029	13.7	1.6	0.06	12.6	1.6	1.6	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.18	gi|298674731|ref|YP_003726481.1|	-	0.05	13.9	0.1	0.21	11.9	0.1	2.1	1	0	0	1	1	1	0	TrkA-N	domain
Pyr_redox_2	PF07992.14	gi|298674731|ref|YP_003726481.1|	-	0.051	12.8	0.2	0.12	11.6	0.1	1.7	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Amidohydro_1	PF01979.20	gi|298674732|ref|YP_003726482.1|	-	3.9e-76	256.6	0.2	4.7e-76	256.3	0.2	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|298674732|ref|YP_003726482.1|	-	3.3e-24	86.2	0.3	1.2e-15	58.0	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
A_deaminase	PF00962.22	gi|298674732|ref|YP_003726482.1|	-	0.0043	16.4	0.0	0.0072	15.7	0.0	1.3	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
Phosphorylase	PF00343.20	gi|298674733|ref|YP_003726483.1|	-	3.3e-29	101.7	2.5	5.5e-21	74.5	0.0	3.4	3	1	1	4	4	4	2	Carbohydrate	phosphorylase
Glyco_transf_5	PF08323.11	gi|298674733|ref|YP_003726483.1|	-	3.6e-05	23.6	0.0	7.2e-05	22.6	0.0	1.4	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Capsule_synth	PF05159.14	gi|298674733|ref|YP_003726483.1|	-	0.039	13.4	0.3	0.12	11.8	0.0	1.9	2	1	1	3	3	3	0	Capsule	polysaccharide	biosynthesis	protein
4HBT_2	PF13279.6	gi|298674734|ref|YP_003726484.1|	-	9.6e-07	29.3	0.0	1.2e-06	29.0	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.22	gi|298674734|ref|YP_003726484.1|	-	6.1e-06	26.5	0.0	9.7e-06	25.9	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	superfamily
Acyl-ACP_TE	PF01643.17	gi|298674734|ref|YP_003726484.1|	-	0.0095	15.2	0.0	0.098	11.9	0.0	2.0	1	1	1	2	2	2	1	Acyl-ACP	thioesterase
LigD_N	PF13298.6	gi|298674735|ref|YP_003726485.1|	-	9.3e-40	135.2	0.0	1.1e-39	134.9	0.0	1.1	1	0	0	1	1	1	1	DNA	polymerase	Ligase	(LigD)
zf-CRD	PF17979.1	gi|298674736|ref|YP_003726486.1|	-	0.015	15.4	0.3	0.016	15.3	0.3	1.0	1	0	0	1	1	1	0	Cysteine	rich	domain	with	multizinc	binding	regions
Lar_restr_allev	PF14354.6	gi|298674736|ref|YP_003726486.1|	-	0.1	13.0	1.3	1.5	9.2	0.1	2.0	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zinc_ribbon_4	PF13717.6	gi|298674736|ref|YP_003726486.1|	-	0.11	12.4	2.8	1.5	8.8	0.1	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2_4	PF13894.6	gi|298674736|ref|YP_003726486.1|	-	0.11	13.3	0.5	6.5	7.9	0.1	2.1	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-C2H2	PF00096.26	gi|298674736|ref|YP_003726486.1|	-	0.13	12.7	0.7	3.8	8.1	0.1	2.1	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
C1_2	PF03107.16	gi|298674736|ref|YP_003726486.1|	-	0.33	11.3	3.4	0.86	10.0	0.2	2.0	1	1	1	2	2	2	0	C1	domain
zinc_ribbon_5	PF13719.6	gi|298674736|ref|YP_003726486.1|	-	0.77	9.6	5.0	2.2	8.1	0.2	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
ADK_lid	PF05191.14	gi|298674736|ref|YP_003726486.1|	-	3.2	7.8	6.9	39	4.3	6.9	2.0	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
Lyase_1	PF00206.20	gi|298674737|ref|YP_003726487.1|	-	1.8e-55	188.6	0.5	3e-55	187.8	0.5	1.3	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.9	gi|298674737|ref|YP_003726487.1|	-	1.4e-21	76.8	0.2	3.2e-21	75.7	0.2	1.6	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminus
ASL_C2	PF14698.6	gi|298674737|ref|YP_003726487.1|	-	0.004	17.9	0.3	0.027	15.2	0.0	2.4	2	0	0	2	2	2	1	Argininosuccinate	lyase	C-terminal
FumaraseC_C	PF10415.9	gi|298674737|ref|YP_003726487.1|	-	0.012	16.1	0.0	0.012	16.1	0.0	2.3	3	0	0	3	3	3	0	Fumarase	C	C-terminus
DUF2284	PF10050.9	gi|298674738|ref|YP_003726488.1|	-	7.5e-46	155.9	0.1	9.5e-46	155.5	0.1	1.1	1	0	0	1	1	1	1	Predicted	metal-binding	protein	(DUF2284)
T4_deiodinase	PF00837.17	gi|298674738|ref|YP_003726488.1|	-	0.01	15.1	0.0	0.014	14.7	0.0	1.2	1	0	0	1	1	1	0	Iodothyronine	deiodinase
URO-D	PF01208.17	gi|298674740|ref|YP_003726490.1|	-	2.2e-62	211.2	0.0	2.5e-62	211.1	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
UvrA_inter	PF17760.1	gi|298674741|ref|YP_003726491.1|	-	2.9e-39	133.5	1.0	6.7e-39	132.3	1.0	1.7	1	0	0	1	1	1	1	UvrA	interaction	domain
UvrA_DNA-bind	PF17755.1	gi|298674741|ref|YP_003726491.1|	-	5.9e-35	120.0	0.0	3.9e-33	114.1	0.0	3.0	3	0	0	3	3	3	1	UvrA	DNA-binding	domain
ABC_tran	PF00005.27	gi|298674741|ref|YP_003726491.1|	-	5.1e-22	78.9	0.3	3e-10	40.7	0.1	4.3	3	1	0	3	3	3	3	ABC	transporter
SMC_N	PF02463.19	gi|298674741|ref|YP_003726491.1|	-	8.7e-12	44.9	0.1	0.0096	15.4	0.0	4.1	3	1	0	3	3	3	3	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|298674741|ref|YP_003726491.1|	-	7.8e-08	31.9	0.1	0.005	16.6	0.0	2.7	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|298674741|ref|YP_003726491.1|	-	1.9e-07	31.6	0.0	0.033	14.6	0.0	3.3	3	0	0	3	3	3	2	AAA	ATPase	domain
AAA_22	PF13401.6	gi|298674741|ref|YP_003726491.1|	-	1.1e-06	28.9	2.0	0.059	13.6	0.0	4.0	5	0	0	5	5	3	2	AAA	domain
BCA_ABC_TP_C	PF12399.8	gi|298674741|ref|YP_003726491.1|	-	2e-06	27.6	2.8	0.011	15.6	0.2	2.5	2	0	0	2	2	2	2	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_21	PF13304.6	gi|298674741|ref|YP_003726491.1|	-	7.8e-06	25.9	7.2	0.012	15.5	0.0	4.2	4	0	0	4	4	4	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
RsgA_GTPase	PF03193.16	gi|298674741|ref|YP_003726491.1|	-	1e-05	25.5	0.1	0.12	12.3	0.0	2.5	2	0	0	2	2	2	2	RsgA	GTPase
DnaJ_CXXCXGXG	PF00684.19	gi|298674741|ref|YP_003726491.1|	-	4.4e-05	23.8	10.0	0.041	14.2	0.3	3.9	4	1	0	4	4	3	2	DnaJ	central	domain
APS_kinase	PF01583.20	gi|298674741|ref|YP_003726491.1|	-	6.1e-05	23.0	0.7	0.71	9.7	0.0	3.4	3	0	0	3	3	3	2	Adenylylsulphate	kinase
AAA_25	PF13481.6	gi|298674741|ref|YP_003726491.1|	-	0.00032	20.3	0.1	0.49	9.9	0.0	3.0	3	0	0	3	3	3	1	AAA	domain
AAA_14	PF13173.6	gi|298674741|ref|YP_003726491.1|	-	0.00046	20.2	0.1	3.1	7.9	0.1	3.5	3	0	0	3	3	3	1	AAA	domain
AAA_18	PF13238.6	gi|298674741|ref|YP_003726491.1|	-	0.00061	20.3	0.1	2.2	8.8	0.1	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_24	PF13479.6	gi|298674741|ref|YP_003726491.1|	-	0.00066	19.4	0.4	1.5	8.5	0.0	3.5	3	0	0	3	3	3	1	AAA	domain
Viral_helicase1	PF01443.18	gi|298674741|ref|YP_003726491.1|	-	0.00079	19.2	0.1	0.031	14.0	0.1	2.7	3	0	0	3	3	2	1	Viral	(Superfamily	1)	RNA	helicase
MMR_HSR1	PF01926.23	gi|298674741|ref|YP_003726491.1|	-	0.0013	18.8	0.6	0.17	12.0	0.0	3.2	3	0	0	3	3	2	1	50S	ribosome-binding	GTPase
T2SSE	PF00437.20	gi|298674741|ref|YP_003726491.1|	-	0.0024	17.0	0.1	0.4	9.7	0.0	2.5	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ATPase_2	PF01637.18	gi|298674741|ref|YP_003726491.1|	-	0.0025	17.8	0.0	1.7	8.5	0.0	2.8	2	0	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
cobW	PF02492.19	gi|298674741|ref|YP_003726491.1|	-	0.0026	17.4	0.4	0.25	10.9	0.1	2.4	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.6	gi|298674741|ref|YP_003726491.1|	-	0.0038	17.4	0.1	3.2	7.9	0.1	3.0	3	0	0	3	3	2	1	AAA	domain
AAA_23	PF13476.6	gi|298674741|ref|YP_003726491.1|	-	0.0046	17.5	3.3	1.2	9.6	0.2	3.0	3	0	0	3	3	2	1	AAA	domain
DUF2075	PF09848.9	gi|298674741|ref|YP_003726491.1|	-	0.0054	16.0	0.1	1.9	7.7	0.1	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
PRK	PF00485.18	gi|298674741|ref|YP_003726491.1|	-	0.02	14.6	0.1	2.5	7.8	0.0	2.6	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_15	PF13175.6	gi|298674741|ref|YP_003726491.1|	-	0.029	14.1	7.0	0.96	9.1	0.0	4.1	4	1	0	4	4	4	0	AAA	ATPase	domain
NACHT	PF05729.12	gi|298674741|ref|YP_003726491.1|	-	0.029	14.3	0.1	3	7.8	0.1	2.4	2	0	0	2	2	2	0	NACHT	domain
NB-ARC	PF00931.22	gi|298674741|ref|YP_003726491.1|	-	0.034	13.3	0.0	4.4	6.4	0.0	3.1	3	0	0	3	3	3	0	NB-ARC	domain
RNA_helicase	PF00910.22	gi|298674741|ref|YP_003726491.1|	-	0.036	14.4	0.1	2.7	8.4	0.0	2.6	2	0	0	2	2	2	0	RNA	helicase
NTPase_1	PF03266.15	gi|298674741|ref|YP_003726491.1|	-	0.046	13.6	2.9	1.9	8.3	0.1	3.6	3	0	0	3	3	3	0	NTPase
AAA_7	PF12775.7	gi|298674741|ref|YP_003726491.1|	-	0.061	12.8	0.1	3.6	7.1	0.1	2.4	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
Zn-ribbon_8	PF09723.10	gi|298674741|ref|YP_003726491.1|	-	0.064	13.4	14.4	0.11	12.7	1.6	4.3	4	0	0	4	4	4	0	Zinc	ribbon	domain
ATPase	PF06745.13	gi|298674741|ref|YP_003726491.1|	-	0.065	12.6	0.0	7.5	5.8	0.0	2.6	2	0	0	2	2	2	0	KaiC
MeaB	PF03308.16	gi|298674741|ref|YP_003726491.1|	-	0.068	12.1	0.0	1.1	8.2	0.0	2.3	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_30	PF13604.6	gi|298674741|ref|YP_003726491.1|	-	0.076	12.7	0.1	10	5.8	0.1	2.9	3	0	0	3	3	3	0	AAA	domain
Pox_E10	PF04805.12	gi|298674741|ref|YP_003726491.1|	-	0.11	12.4	0.3	0.28	11.1	0.3	1.7	1	0	0	1	1	1	0	E10-like	protein	conserved	region
Zeta_toxin	PF06414.12	gi|298674741|ref|YP_003726491.1|	-	0.12	11.6	0.0	20	4.4	0.0	2.7	2	0	0	2	2	2	0	Zeta	toxin
DUF463	PF04317.12	gi|298674741|ref|YP_003726491.1|	-	0.17	10.8	0.8	0.96	8.3	0.0	2.0	2	0	0	2	2	2	0	YcjX-like	family,	DUF463
Anti-TRAP	PF15777.5	gi|298674741|ref|YP_003726491.1|	-	0.25	11.3	8.3	8.3	6.5	0.0	4.1	3	1	0	3	3	3	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
Zn_Tnp_IS91	PF14319.6	gi|298674741|ref|YP_003726491.1|	-	0.86	9.7	0.0	0.86	9.7	0.0	3.0	4	0	0	4	4	3	0	Transposase	zinc-binding	domain
HypA	PF01155.19	gi|298674741|ref|YP_003726491.1|	-	2.2	8.3	5.4	3.6	7.6	0.0	3.5	4	0	0	4	4	4	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DZR	PF12773.7	gi|298674741|ref|YP_003726491.1|	-	7.7	6.6	9.8	26	4.9	0.3	3.7	4	0	0	4	4	3	0	Double	zinc	ribbon
HicB_lk_antitox	PF15919.5	gi|298674742|ref|YP_003726492.1|	-	0.0024	18.0	0.0	0.0026	17.9	0.0	1.1	1	0	0	1	1	1	1	HicB_like	antitoxin	of	bacterial	toxin-antitoxin	system
Bac_DNA_binding	PF00216.21	gi|298674742|ref|YP_003726492.1|	-	0.02	15.1	0.0	0.021	15.0	0.0	1.2	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
TatD_DNase	PF01026.21	gi|298674743|ref|YP_003726493.1|	-	6.5e-24	84.7	0.0	8.2e-24	84.3	0.0	1.1	1	0	0	1	1	1	1	TatD	related	DNase
Iso_dh	PF00180.20	gi|298674744|ref|YP_003726494.1|	-	7.8e-87	291.6	0.0	8.9e-87	291.5	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
HMGL-like	PF00682.19	gi|298674745|ref|YP_003726495.1|	-	3.8e-35	121.7	0.0	4.7e-35	121.4	0.0	1.1	1	0	0	1	1	1	1	HMGL-like
ACT	PF01842.25	gi|298674746|ref|YP_003726496.1|	-	0.00025	20.7	0.3	0.00097	18.9	0.1	2.2	2	1	0	2	2	2	1	ACT	domain
CM_2	PF01817.21	gi|298674746|ref|YP_003726496.1|	-	0.028	14.7	0.3	0.054	13.9	0.3	1.4	1	0	0	1	1	1	0	Chorismate	mutase	type	II
ACT_7	PF13840.6	gi|298674746|ref|YP_003726496.1|	-	0.039	13.7	0.1	0.082	12.7	0.1	1.5	1	0	0	1	1	1	0	ACT	domain
ACT_4	PF13291.6	gi|298674746|ref|YP_003726496.1|	-	0.067	13.8	0.1	0.33	11.6	0.0	2.0	2	0	0	2	2	2	0	ACT	domain
FAD_binding_3	PF01494.19	gi|298674747|ref|YP_003726497.1|	-	1e-14	54.5	3.6	5.4e-12	45.6	3.6	3.0	1	1	0	1	1	1	1	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|298674747|ref|YP_003726497.1|	-	5.8e-13	49.0	0.3	8e-13	48.5	0.3	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.12	gi|298674747|ref|YP_003726497.1|	-	1.5e-11	44.0	0.2	3e-09	36.4	0.1	2.1	2	0	0	2	2	2	2	Lycopene	cyclase	protein
Trp_halogenase	PF04820.14	gi|298674747|ref|YP_003726497.1|	-	2.5e-10	39.8	0.0	3.5e-06	26.1	0.0	2.1	1	1	1	2	2	2	2	Tryptophan	halogenase
Pyr_redox_2	PF07992.14	gi|298674747|ref|YP_003726497.1|	-	1e-09	38.1	1.8	2.7e-09	36.7	1.8	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|298674747|ref|YP_003726497.1|	-	3.1e-08	33.6	4.3	0.0025	17.5	1.5	2.3	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|298674747|ref|YP_003726497.1|	-	3.1e-07	29.9	2.0	5.1e-07	29.2	2.0	1.3	1	0	0	1	1	1	1	Thi4	family
HI0933_like	PF03486.14	gi|298674747|ref|YP_003726497.1|	-	2e-06	26.8	2.1	2.6e-06	26.4	0.1	2.0	2	0	0	2	2	2	1	HI0933-like	protein
GIDA	PF01134.22	gi|298674747|ref|YP_003726497.1|	-	4e-05	22.9	1.1	6e-05	22.3	0.3	1.7	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|298674747|ref|YP_003726497.1|	-	0.00011	22.4	0.2	0.0003	21.0	0.2	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|298674747|ref|YP_003726497.1|	-	0.0011	18.2	0.9	0.0011	18.2	0.9	1.9	2	0	0	2	2	2	1	FAD	binding	domain
AdoHcyase	PF05221.17	gi|298674748|ref|YP_003726498.1|	-	1e-57	195.6	0.0	4e-30	105.0	0.0	2.0	1	1	1	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.21	gi|298674748|ref|YP_003726498.1|	-	3.6e-51	173.4	1.7	4.3e-51	173.2	0.6	1.7	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|298674748|ref|YP_003726498.1|	-	3e-08	33.2	0.1	5.6e-08	32.3	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|298674748|ref|YP_003726498.1|	-	5.6e-06	26.0	0.0	9.8e-06	25.2	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
AlaDh_PNT_C	PF01262.21	gi|298674748|ref|YP_003726498.1|	-	0.048	13.0	0.5	0.12	11.6	0.5	1.7	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
GSH-S_ATP	PF02955.16	gi|298674748|ref|YP_003726498.1|	-	0.13	11.7	0.0	0.38	10.1	0.0	1.7	2	0	0	2	2	2	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
Amidohydro_1	PF01979.20	gi|298674749|ref|YP_003726499.1|	-	3.3e-75	253.5	0.2	4e-75	253.3	0.2	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|298674749|ref|YP_003726499.1|	-	3.8e-24	86.0	0.3	8.9e-16	58.4	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
A_deaminase	PF00962.22	gi|298674749|ref|YP_003726499.1|	-	0.00086	18.7	0.0	0.0015	17.9	0.0	1.3	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
PPS_PS	PF02006.16	gi|298674750|ref|YP_003726500.1|	-	2.3e-75	252.0	3.5	2.8e-75	251.7	3.5	1.1	1	0	0	1	1	1	1	Phosphopantothenate/pantothenate	synthetase
DUF3755	PF12579.8	gi|298674750|ref|YP_003726500.1|	-	0.066	12.9	0.8	0.13	12.0	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3755)
GHMP_kinases_N	PF00288.26	gi|298674751|ref|YP_003726501.1|	-	3.3e-09	36.8	2.1	6.4e-09	35.9	2.1	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|298674751|ref|YP_003726501.1|	-	2.4e-08	34.2	0.1	6e-07	29.7	0.0	2.9	3	0	0	3	3	3	1	GHMP	kinases	C	terminal
DFP	PF04127.15	gi|298674752|ref|YP_003726502.1|	-	3.6e-49	167.1	0.1	1.5e-48	165.1	0.0	1.8	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.19	gi|298674752|ref|YP_003726502.1|	-	2.6e-34	118.3	0.3	3.9e-34	117.7	0.3	1.3	1	0	0	1	1	1	1	Flavoprotein
acVLRF1	PF18859.1	gi|298674753|ref|YP_003726503.1|	-	2.8e-18	66.4	0.0	5.3e-18	65.6	0.0	1.4	1	0	0	1	1	1	1	Actinobacteria/chloroflexi	VLRF1	release	factor
baeRF_family10	PF18854.1	gi|298674753|ref|YP_003726503.1|	-	7.9e-08	32.6	0.0	1.7e-07	31.6	0.0	1.5	2	0	0	2	2	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	10
eRF1_2	PF03464.15	gi|298674753|ref|YP_003726503.1|	-	8.6e-07	29.3	0.1	2e-06	28.1	0.1	1.6	1	0	0	1	1	1	1	eRF1	domain	2
Taxilin	PF09728.9	gi|298674753|ref|YP_003726503.1|	-	0.001	18.3	9.7	0.001	18.3	9.7	2.0	2	0	0	2	2	2	1	Myosin-like	coiled-coil	protein
OmpH	PF03938.14	gi|298674753|ref|YP_003726503.1|	-	0.01	16.2	12.0	0.018	15.4	9.4	2.3	2	0	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
DUF745	PF05335.13	gi|298674753|ref|YP_003726503.1|	-	0.031	14.0	4.4	0.06	13.1	4.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF745)
FPP	PF05911.11	gi|298674753|ref|YP_003726503.1|	-	0.058	11.6	17.8	0.0094	14.2	13.7	1.6	2	0	0	2	2	2	0	Filament-like	plant	protein,	long	coiled-coil
FliJ	PF02050.16	gi|298674753|ref|YP_003726503.1|	-	0.062	13.5	0.2	0.062	13.5	0.2	2.7	2	1	1	3	3	2	0	Flagellar	FliJ	protein
YscO	PF07321.12	gi|298674753|ref|YP_003726503.1|	-	0.064	13.2	11.1	0.15	12.0	11.1	1.6	1	0	0	1	1	1	0	Type	III	secretion	protein	YscO
V_ATPase_I	PF01496.19	gi|298674753|ref|YP_003726503.1|	-	0.11	10.4	5.5	0.13	10.2	5.5	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF4407	PF14362.6	gi|298674753|ref|YP_003726503.1|	-	0.11	11.8	7.2	0.084	12.2	5.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4407)
GAS	PF13851.6	gi|298674753|ref|YP_003726503.1|	-	0.12	11.8	21.2	0.62	9.4	16.9	2.6	2	1	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Baculo_PEP_N	PF04512.12	gi|298674753|ref|YP_003726503.1|	-	0.15	12.4	0.4	0.57	10.5	0.0	2.0	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	N	terminus
TMF_TATA_bd	PF12325.8	gi|298674753|ref|YP_003726503.1|	-	0.16	12.2	14.4	0.24	11.6	12.9	2.1	2	0	0	2	2	1	0	TATA	element	modulatory	factor	1	TATA	binding
DUF789	PF05623.12	gi|298674753|ref|YP_003726503.1|	-	0.19	11.4	3.0	0.31	10.7	3.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF789)
CP12	PF02672.15	gi|298674753|ref|YP_003726503.1|	-	0.21	12.4	3.9	0.78	10.5	3.9	2.0	1	0	0	1	1	1	0	CP12	domain
Lebercilin	PF15619.6	gi|298674753|ref|YP_003726503.1|	-	0.28	10.8	20.5	0.071	12.8	15.5	2.4	3	0	0	3	3	2	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
DUF4164	PF13747.6	gi|298674753|ref|YP_003726503.1|	-	0.45	10.8	13.3	0.11	12.8	8.0	2.7	3	1	0	3	3	2	0	Domain	of	unknown	function	(DUF4164)
ATF7IP_BD	PF16788.5	gi|298674753|ref|YP_003726503.1|	-	0.46	10.6	14.5	0.043	13.9	9.8	1.7	2	0	0	2	2	1	0	ATF-interacting	protein	binding	domain
APG6_N	PF17675.1	gi|298674753|ref|YP_003726503.1|	-	0.54	10.8	18.2	0.27	11.8	14.5	2.3	2	0	0	2	2	2	0	Apg6	coiled-coil	region
Uds1	PF15456.6	gi|298674753|ref|YP_003726503.1|	-	0.54	10.4	15.7	0.25	11.5	11.9	2.3	2	1	0	2	2	2	0	Up-regulated	During	Septation
DUF4472	PF14739.6	gi|298674753|ref|YP_003726503.1|	-	0.64	10.8	15.4	0.23	12.2	11.5	2.2	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF4472)
GIT_CC	PF16559.5	gi|298674753|ref|YP_003726503.1|	-	0.77	9.7	9.0	15	5.5	1.0	4.0	4	0	0	4	4	3	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
LMBR1	PF04791.16	gi|298674753|ref|YP_003726503.1|	-	0.88	8.4	4.7	1.9	7.3	4.7	1.6	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
Adaptin_binding	PF10199.9	gi|298674753|ref|YP_003726503.1|	-	1	10.0	8.0	1.3	9.7	5.2	2.3	2	0	0	2	2	2	0	Alpha	and	gamma	adaptin	binding	protein	p34
Atg14	PF10186.9	gi|298674753|ref|YP_003726503.1|	-	1.2	8.2	10.9	0.52	9.3	8.2	1.8	2	0	0	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
DUF3450	PF11932.8	gi|298674753|ref|YP_003726503.1|	-	1.4	8.1	11.5	2.1	7.6	8.8	2.3	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF3450)
T3SSipB	PF16535.5	gi|298674753|ref|YP_003726503.1|	-	1.8	9.0	9.0	4.2	7.8	7.7	2.2	2	1	0	2	2	2	0	Type	III	cell	invasion	protein	SipB
HAUS6_N	PF14661.6	gi|298674753|ref|YP_003726503.1|	-	2.5	7.6	13.2	17	4.9	0.0	2.5	2	1	0	2	2	2	0	HAUS	augmin-like	complex	subunit	6	N-terminus
Bacillus_HBL	PF05791.11	gi|298674753|ref|YP_003726503.1|	-	2.7	7.8	15.9	0.067	13.0	6.9	2.7	3	1	0	3	3	3	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF1192	PF06698.11	gi|298674753|ref|YP_003726503.1|	-	3.2	7.9	12.7	4.7	7.3	3.9	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1192)
DUF2203	PF09969.9	gi|298674753|ref|YP_003726503.1|	-	3.4	8.4	7.5	6.8	7.4	5.2	2.5	3	0	0	3	3	2	0	Uncharacterized	conserved	protein	(DUF2203)
Spc7	PF08317.11	gi|298674753|ref|YP_003726503.1|	-	3.4	6.4	21.0	0.86	8.4	17.0	2.0	2	1	0	2	2	2	0	Spc7	kinetochore	protein
HAUS-augmin3	PF14932.6	gi|298674753|ref|YP_003726503.1|	-	3.6	7.1	17.2	2.4	7.7	12.3	2.4	2	1	1	3	3	3	0	HAUS	augmin-like	complex	subunit	3
Leu_zip	PF15294.6	gi|298674753|ref|YP_003726503.1|	-	3.6	7.0	19.6	1.8	8.0	13.0	2.4	2	1	0	2	2	2	0	Leucine	zipper
LUC7	PF03194.15	gi|298674753|ref|YP_003726503.1|	-	4.3	6.9	12.0	1	8.9	7.4	2.0	2	0	0	2	2	2	0	LUC7	N_terminus
FlaC_arch	PF05377.11	gi|298674753|ref|YP_003726503.1|	-	4.7	7.7	20.7	0.34	11.3	2.1	4.5	4	1	0	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
CENP-F_leu_zip	PF10473.9	gi|298674753|ref|YP_003726503.1|	-	5.8	6.9	24.1	0.79	9.7	11.3	3.2	2	1	1	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
UPF0242	PF06785.11	gi|298674753|ref|YP_003726503.1|	-	6	6.9	23.7	2.4	8.2	18.7	2.4	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
CENP-Q	PF13094.6	gi|298674753|ref|YP_003726503.1|	-	7.3	6.8	17.3	1.6e+02	2.4	15.8	3.0	2	1	0	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Csm1_N	PF18504.1	gi|298674753|ref|YP_003726503.1|	-	9.2	6.7	15.1	20	5.6	11.2	2.9	1	1	1	2	2	2	0	Csm1	N-terminal	domain
DUF641	PF04859.12	gi|298674753|ref|YP_003726503.1|	-	9.2	6.6	13.5	1.4	9.2	6.6	2.6	2	1	1	3	3	3	0	Plant	protein	of	unknown	function	(DUF641)
HTH_1	PF00126.27	gi|298674754|ref|YP_003726504.1|	-	0.027	14.4	0.0	2.9	7.9	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
FtsJ	PF01728.19	gi|298674755|ref|YP_003726505.1|	-	2.4e-58	197.1	0.0	2.9e-58	196.9	0.0	1.1	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
TRAM	PF01938.20	gi|298674755|ref|YP_003726505.1|	-	6e-09	35.8	1.4	1.5e-08	34.5	1.4	1.7	1	0	0	1	1	1	1	TRAM	domain
Methyltransf_31	PF13847.6	gi|298674755|ref|YP_003726505.1|	-	1.9e-05	24.5	0.3	0.00051	19.9	0.3	2.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298674755|ref|YP_003726505.1|	-	0.00031	20.6	0.0	0.0024	17.7	0.0	2.2	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298674755|ref|YP_003726505.1|	-	0.00048	20.8	0.2	0.035	14.8	0.0	3.0	1	1	2	3	3	3	2	Methyltransferase	domain
UPF0146	PF03686.13	gi|298674755|ref|YP_003726505.1|	-	0.034	14.0	0.3	0.073	13.0	0.3	1.7	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0146)
NAD_binding_10	PF13460.6	gi|298674755|ref|YP_003726505.1|	-	0.067	13.1	0.1	0.1	12.5	0.1	1.3	1	0	0	1	1	1	0	NAD(P)H-binding
Methyltransf_11	PF08241.12	gi|298674755|ref|YP_003726505.1|	-	0.12	13.0	0.1	0.44	11.2	0.0	2.1	2	1	0	2	2	2	0	Methyltransferase	domain
OrfB_Zn_ribbon	PF07282.11	gi|298674756|ref|YP_003726506.1|	-	3.2e-25	87.8	3.2	8.6e-25	86.5	1.2	2.5	2	1	1	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298674756|ref|YP_003726506.1|	-	7.6e-10	39.1	1.3	7.6e-10	39.1	1.3	1.7	2	0	0	2	2	2	1	Probable	transposase
HTH_OrfB_IS605	PF12323.8	gi|298674756|ref|YP_003726506.1|	-	0.066	12.7	0.1	0.24	10.9	0.1	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
HypA	PF01155.19	gi|298674756|ref|YP_003726506.1|	-	0.07	13.1	0.1	0.12	12.4	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
UPF0547	PF10571.9	gi|298674756|ref|YP_003726506.1|	-	0.34	11.0	2.8	0.87	9.7	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Zn_Tnp_IS1595	PF12760.7	gi|298674756|ref|YP_003726506.1|	-	1	9.4	5.0	2.5	8.1	5.0	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF2387	PF09526.10	gi|298674756|ref|YP_003726506.1|	-	1.1	9.4	4.9	12	6.1	2.0	2.9	2	1	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
DNA_RNApol_7kD	PF03604.13	gi|298674756|ref|YP_003726506.1|	-	1.9	8.3	7.0	7.1	6.4	7.0	2.0	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Rubredoxin_2	PF18073.1	gi|298674756|ref|YP_003726506.1|	-	2.1	8.1	4.5	21	4.9	0.4	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Tnp_zf-ribbon_2	PF13842.6	gi|298674756|ref|YP_003726506.1|	-	2.2	9.1	6.5	5.2	8.0	6.5	1.6	1	0	0	1	1	1	0	DDE_Tnp_1-like	zinc-ribbon
Semialdhyde_dh	PF01118.24	gi|298674757|ref|YP_003726507.1|	-	8.3e-35	119.9	0.0	1.3e-34	119.2	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.18	gi|298674757|ref|YP_003726507.1|	-	7.1e-24	84.9	0.0	1e-23	84.4	0.0	1.1	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
F420_oxidored	PF03807.17	gi|298674757|ref|YP_003726507.1|	-	0.004	17.7	0.0	0.0083	16.7	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.22	gi|298674757|ref|YP_003726507.1|	-	0.12	13.2	0.0	0.29	12.0	0.0	1.6	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
CBS	PF00571.28	gi|298674758|ref|YP_003726508.1|	-	2.8e-32	110.9	3.0	3.4e-16	59.4	0.2	2.2	2	0	0	2	2	2	2	CBS	domain
Aromatic_hydrox	PF11723.8	gi|298674758|ref|YP_003726508.1|	-	0.049	13.1	0.0	0.053	13.0	0.0	1.0	1	0	0	1	1	1	0	Homotrimeric	ring	hydroxylase
Thioredoxin_3	PF13192.6	gi|298674758|ref|YP_003726508.1|	-	0.068	13.2	0.4	0.16	12.1	0.1	1.8	2	0	0	2	2	2	0	Thioredoxin	domain
ArgJ	PF01960.18	gi|298674759|ref|YP_003726509.1|	-	2.2e-139	464.4	6.7	2.5e-139	464.2	6.7	1.0	1	0	0	1	1	1	1	ArgJ	family
ADP_PFK_GK	PF04587.15	gi|298674760|ref|YP_003726510.1|	-	2.5e-116	388.7	0.3	2.9e-116	388.5	0.3	1.0	1	0	0	1	1	1	1	ADP-specific	Phosphofructokinase/Glucokinase	conserved	region
DUF2290	PF10053.9	gi|298674760|ref|YP_003726510.1|	-	0.0039	16.7	0.0	0.009	15.5	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2290)
ADP_PFK_GK	PF04587.15	gi|298674761|ref|YP_003726511.1|	-	1.1e-98	330.6	0.1	1.3e-98	330.4	0.1	1.0	1	0	0	1	1	1	1	ADP-specific	Phosphofructokinase/Glucokinase	conserved	region
PfkB	PF00294.24	gi|298674761|ref|YP_003726511.1|	-	0.01	15.2	0.0	0.4	10.0	0.0	2.5	2	0	0	2	2	2	0	pfkB	family	carbohydrate	kinase
DUF771	PF05595.11	gi|298674761|ref|YP_003726511.1|	-	0.039	13.9	0.0	0.12	12.3	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF771)
tRNA_NucTransf2	PF09249.11	gi|298674762|ref|YP_003726512.1|	-	1.4e-43	147.8	0.0	3.2e-43	146.6	0.0	1.7	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.23	gi|298674762|ref|YP_003726512.1|	-	3.3e-16	59.4	0.0	9.2e-16	57.9	0.0	1.8	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
SMODS	PF18144.1	gi|298674762|ref|YP_003726512.1|	-	1.4e-07	31.8	0.1	3.2e-07	30.6	0.1	1.5	1	0	0	1	1	1	1	Second	Messenger	Oligonucleotide	or	Dinucleotide	Synthetase	domain
Polbeta	PF18765.1	gi|298674762|ref|YP_003726512.1|	-	0.062	13.4	0.0	0.2	11.8	0.0	1.9	1	0	0	1	1	1	0	Polymerase	beta,	Nucleotidyltransferase
Raco_middle	PF17651.1	gi|298674762|ref|YP_003726512.1|	-	0.19	11.4	0.1	0.32	10.7	0.1	1.3	1	0	0	1	1	1	0	RACo	middle	region
ABC_tran	PF00005.27	gi|298674763|ref|YP_003726513.1|	-	1.1e-33	116.7	0.0	2.6e-33	115.4	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
CBS	PF00571.28	gi|298674763|ref|YP_003726513.1|	-	7.4e-15	55.1	1.0	2.8e-07	30.9	0.0	2.6	2	0	0	2	2	2	2	CBS	domain
AAA_21	PF13304.6	gi|298674763|ref|YP_003726513.1|	-	2.5e-05	24.2	1.0	0.07	12.9	0.1	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
ABC_ATPase	PF09818.9	gi|298674763|ref|YP_003726513.1|	-	5.8e-05	22.1	0.8	0.11	11.3	0.1	3.1	3	1	0	3	3	3	2	Predicted	ATPase	of	the	ABC	class
RsgA_GTPase	PF03193.16	gi|298674763|ref|YP_003726513.1|	-	0.00011	22.2	0.1	0.00037	20.4	0.0	2.0	2	0	0	2	2	2	1	RsgA	GTPase
AAA_29	PF13555.6	gi|298674763|ref|YP_003726513.1|	-	0.00012	21.8	0.0	0.00035	20.3	0.0	1.8	2	0	0	2	2	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|298674763|ref|YP_003726513.1|	-	0.0006	20.2	0.1	0.0012	19.2	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|298674763|ref|YP_003726513.1|	-	0.0012	19.2	0.1	0.0049	17.1	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.6	gi|298674763|ref|YP_003726513.1|	-	0.0013	19.2	0.1	0.0041	17.6	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
T2SSE	PF00437.20	gi|298674763|ref|YP_003726513.1|	-	0.004	16.3	0.2	0.46	9.5	0.0	2.4	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
SMC_N	PF02463.19	gi|298674763|ref|YP_003726513.1|	-	0.012	15.1	0.3	0.61	9.5	0.3	2.3	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
AAA_30	PF13604.6	gi|298674763|ref|YP_003726513.1|	-	0.012	15.3	0.0	0.47	10.1	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.21	gi|298674763|ref|YP_003726513.1|	-	0.014	14.8	0.0	0.024	14.0	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_14	PF13173.6	gi|298674763|ref|YP_003726513.1|	-	0.044	13.8	0.0	0.11	12.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|298674763|ref|YP_003726513.1|	-	0.1	12.8	0.0	0.29	11.3	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.14	gi|298674763|ref|YP_003726513.1|	-	0.1	12.6	0.0	0.25	11.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
MMR_HSR1	PF01926.23	gi|298674763|ref|YP_003726513.1|	-	0.12	12.5	0.1	3.6	7.7	0.0	2.9	3	0	0	3	3	3	0	50S	ribosome-binding	GTPase
CPT	PF07931.12	gi|298674763|ref|YP_003726513.1|	-	0.12	12.2	0.0	0.21	11.4	0.0	1.5	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
RTT107_BRCT_6	PF16771.5	gi|298674763|ref|YP_003726513.1|	-	0.13	12.4	0.1	0.28	11.3	0.1	1.5	1	0	0	1	1	1	0	Regulator	of	Ty1	transposition	protein	107	BRCT	domain
SbcCD_C	PF13558.6	gi|298674763|ref|YP_003726513.1|	-	0.13	12.5	1.2	0.73	10.1	1.2	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
G-alpha	PF00503.20	gi|298674763|ref|YP_003726513.1|	-	0.18	10.9	0.0	0.21	10.7	0.0	1.3	1	0	0	1	1	1	0	G-protein	alpha	subunit
BPD_transp_1	PF00528.22	gi|298674764|ref|YP_003726514.1|	-	3.5e-22	79.0	13.6	3.5e-22	79.0	13.6	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OpuAC	PF04069.12	gi|298674765|ref|YP_003726515.1|	-	6.8e-61	206.1	5.2	7.9e-61	205.9	5.2	1.0	1	0	0	1	1	1	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
MucBP_2	PF17965.1	gi|298674765|ref|YP_003726515.1|	-	0.025	15.2	1.2	5.4	7.7	0.0	2.8	2	0	0	2	2	2	0	Mucin	binding	domain
DUF4912	PF16258.5	gi|298674765|ref|YP_003726515.1|	-	0.035	14.3	0.3	0.088	13.0	0.3	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4912)
OpuAC	PF04069.12	gi|298674766|ref|YP_003726516.1|	-	1.2e-67	228.3	7.0	1.4e-67	228.0	7.0	1.0	1	0	0	1	1	1	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
Fer4_14	PF13394.6	gi|298674767|ref|YP_003726517.1|	-	1.4e-06	28.4	0.0	2.4e-05	24.5	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.21	gi|298674767|ref|YP_003726517.1|	-	2e-05	25.1	0.0	4.9e-05	23.8	0.0	1.8	1	0	0	1	1	1	1	Radical	SAM	superfamily
DUF2551	PF10826.8	gi|298674768|ref|YP_003726518.1|	-	1e-32	112.2	0.8	1.2e-32	111.9	0.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2551)
FUR	PF01475.19	gi|298674768|ref|YP_003726518.1|	-	0.0074	16.4	0.1	0.01	16.0	0.1	1.2	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
Prenyltransf	PF01255.19	gi|298674769|ref|YP_003726519.1|	-	1.3e-67	227.6	0.0	1.6e-67	227.3	0.0	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
ADP_ribosyl_GH	PF03747.14	gi|298674770|ref|YP_003726520.1|	-	1.4e-63	215.4	0.0	1.6e-63	215.1	0.0	1.1	1	0	0	1	1	1	1	ADP-ribosylglycohydrolase
STb_secrete	PF09075.10	gi|298674770|ref|YP_003726520.1|	-	0.25	11.4	2.3	1.2	9.3	0.1	2.8	3	0	0	3	3	3	0	Heat-stable	enterotoxin	B,	secretory
RNA_pol_A_bac	PF01000.26	gi|298674771|ref|YP_003726521.1|	-	5.6e-28	97.6	0.0	1.5e-27	96.1	0.0	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.24	gi|298674771|ref|YP_003726521.1|	-	7.9e-15	54.1	0.0	1e-14	53.7	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Fer4	PF00037.27	gi|298674771|ref|YP_003726521.1|	-	3.4e-07	29.8	12.4	9.3e-05	22.1	3.0	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674771|ref|YP_003726521.1|	-	4.5e-07	30.4	7.5	4.5e-07	30.4	7.5	2.6	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674771|ref|YP_003726521.1|	-	2.4e-06	27.6	9.6	2.4e-06	27.6	9.6	2.7	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298674771|ref|YP_003726521.1|	-	7e-06	26.1	7.9	7e-06	26.1	7.9	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674771|ref|YP_003726521.1|	-	0.00013	22.9	12.4	0.0077	17.2	0.6	3.1	3	0	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.6	gi|298674771|ref|YP_003726521.1|	-	0.00028	21.2	13.8	0.065	13.7	0.1	2.9	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298674771|ref|YP_003726521.1|	-	0.00054	19.9	2.8	0.00054	19.9	2.8	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298674771|ref|YP_003726521.1|	-	0.00094	19.7	17.7	0.089	13.4	3.0	3.3	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298674771|ref|YP_003726521.1|	-	0.0044	17.4	19.4	0.15	12.6	1.6	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298674771|ref|YP_003726521.1|	-	0.0051	16.9	12.2	0.0051	16.9	12.2	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Furin-like_2	PF15913.5	gi|298674771|ref|YP_003726521.1|	-	0.017	15.2	5.2	0.082	13.1	1.9	2.2	2	0	0	2	2	2	0	Furin-like	repeat,	cysteine-rich
Fer4_3	PF12798.7	gi|298674771|ref|YP_003726521.1|	-	0.05	14.6	3.5	0.05	14.6	3.5	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|298674771|ref|YP_003726521.1|	-	0.48	10.6	13.5	0.15	12.2	9.8	2.1	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674771|ref|YP_003726521.1|	-	3.5	7.9	22.5	0.11	12.7	2.4	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|298674771|ref|YP_003726521.1|	-	4.2	8.2	11.1	0.28	12.0	1.3	2.6	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Ribosomal_S11	PF00411.19	gi|298674772|ref|YP_003726522.1|	-	2.7e-47	159.7	2.7	3.7e-47	159.3	2.7	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S11
Pilus_CpaD	PF09476.10	gi|298674772|ref|YP_003726522.1|	-	0.00017	21.4	0.2	0.00021	21.1	0.2	1.2	1	0	0	1	1	1	1	Pilus	biogenesis	CpaD	protein	(pilus_cpaD)
CBM_25	PF03423.13	gi|298674772|ref|YP_003726522.1|	-	0.12	12.7	0.2	0.24	11.7	0.0	1.6	2	0	0	2	2	2	0	Carbohydrate	binding	domain	(family	25)
S4	PF01479.25	gi|298674773|ref|YP_003726523.1|	-	4.4e-13	48.7	0.0	1e-12	47.5	0.0	1.6	1	0	0	1	1	1	1	S4	domain
Ribosomal_S13	PF00416.22	gi|298674774|ref|YP_003726524.1|	-	5.6e-42	143.2	0.1	6.4e-42	143.0	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.11	gi|298674774|ref|YP_003726524.1|	-	0.006	15.4	0.0	0.0063	15.3	0.0	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
HHH_6	PF14579.6	gi|298674774|ref|YP_003726524.1|	-	0.081	13.2	0.0	0.16	12.3	0.0	1.4	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
TruB_C_2	PF16198.5	gi|298674775|ref|YP_003726525.1|	-	5.1e-26	90.6	0.0	9.6e-26	89.7	0.0	1.5	1	0	0	1	1	1	1	tRNA	pseudouridylate	synthase	B	C-terminal	domain
TruB_N	PF01509.18	gi|298674775|ref|YP_003726525.1|	-	4.4e-24	85.5	0.1	1.8e-20	73.8	0.1	3.5	2	1	0	2	2	2	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
DKCLD	PF08068.12	gi|298674775|ref|YP_003726525.1|	-	7.7e-17	61.1	0.5	1.9e-16	59.9	0.5	1.6	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
PUA	PF01472.20	gi|298674775|ref|YP_003726525.1|	-	6.7e-15	54.8	0.8	1.3e-14	53.9	0.1	1.9	2	0	0	2	2	2	1	PUA	domain
RRM_occluded	PF16842.5	gi|298674775|ref|YP_003726525.1|	-	0.11	12.4	0.0	0.42	10.5	0.0	2.1	2	0	0	2	2	2	0	Occluded	RNA-recognition	motif
Cytidylate_kin2	PF13189.6	gi|298674776|ref|YP_003726526.1|	-	9.8e-26	91.0	0.0	3.8e-24	85.8	0.0	2.0	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.6	gi|298674776|ref|YP_003726526.1|	-	4.3e-13	49.9	0.0	5.7e-13	49.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|298674776|ref|YP_003726526.1|	-	1.8e-11	44.6	0.0	3.1e-11	43.9	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.18	gi|298674776|ref|YP_003726526.1|	-	7.2e-11	42.2	0.1	2.4e-06	27.4	0.0	2.1	1	1	0	2	2	2	2	Cytidylate	kinase
ADK	PF00406.22	gi|298674776|ref|YP_003726526.1|	-	0.00011	22.3	0.0	0.00048	20.3	0.0	2.0	1	1	0	1	1	1	1	Adenylate	kinase
AAA_33	PF13671.6	gi|298674776|ref|YP_003726526.1|	-	0.00081	19.6	0.0	0.0086	16.2	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
CoaE	PF01121.20	gi|298674776|ref|YP_003726526.1|	-	0.001	18.8	0.0	0.43	10.2	0.0	2.1	1	1	1	2	2	2	2	Dephospho-CoA	kinase
AAA_28	PF13521.6	gi|298674776|ref|YP_003726526.1|	-	0.0011	19.2	0.0	0.002	18.4	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Sulfotransfer_3	PF13469.6	gi|298674776|ref|YP_003726526.1|	-	0.0042	17.5	0.0	0.0061	17.0	0.0	1.3	1	1	0	1	1	1	1	Sulfotransferase	family
SKI	PF01202.22	gi|298674776|ref|YP_003726526.1|	-	0.012	15.8	0.1	0.022	14.9	0.1	1.4	1	1	0	1	1	1	0	Shikimate	kinase
dNK	PF01712.19	gi|298674776|ref|YP_003726526.1|	-	0.08	12.8	0.1	0.65	9.8	0.0	2.1	1	1	0	2	2	2	0	Deoxynucleoside	kinase
EMC3_TMCO1	PF01956.16	gi|298674777|ref|YP_003726527.1|	-	2e-49	167.6	10.0	3e-49	167.0	10.0	1.2	1	0	0	1	1	1	1	Integral	membrane	protein	EMC3/TMCO1-like
HPIH	PF13323.6	gi|298674777|ref|YP_003726527.1|	-	0.035	14.0	0.3	0.062	13.1	0.0	1.5	2	0	0	2	2	2	0	N-terminal	domain	with	HPIH	motif
ADK	PF00406.22	gi|298674778|ref|YP_003726528.1|	-	6.1e-60	201.7	0.0	7.2e-60	201.5	0.0	1.0	1	0	0	1	1	1	1	Adenylate	kinase
AAA_17	PF13207.6	gi|298674778|ref|YP_003726528.1|	-	1.3e-29	103.3	0.0	5.5e-29	101.3	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
ADK_lid	PF05191.14	gi|298674778|ref|YP_003726528.1|	-	2.3e-17	62.7	3.3	4.3e-17	61.8	2.5	2.0	3	0	0	3	3	3	1	Adenylate	kinase,	active	site	lid
AAA_18	PF13238.6	gi|298674778|ref|YP_003726528.1|	-	1.5e-06	28.8	0.0	3.3e-06	27.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Hydin_ADK	PF17213.3	gi|298674778|ref|YP_003726528.1|	-	2.1e-06	28.2	0.0	0.096	13.0	0.1	2.4	1	1	1	2	2	2	2	Hydin	Adenylate	kinase-like	domain
AAA_33	PF13671.6	gi|298674778|ref|YP_003726528.1|	-	6.2e-05	23.2	0.0	0.0003	21.0	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
zf-RRN7	PF11781.8	gi|298674778|ref|YP_003726528.1|	-	0.003	17.2	2.4	0.22	11.2	0.3	2.3	2	0	0	2	2	2	1	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
AAA_28	PF13521.6	gi|298674778|ref|YP_003726528.1|	-	0.0092	16.2	0.0	0.02	15.1	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
Thymidylate_kin	PF02223.17	gi|298674778|ref|YP_003726528.1|	-	0.011	15.4	0.2	0.22	11.2	0.1	2.5	2	1	0	2	2	2	0	Thymidylate	kinase
AAA_24	PF13479.6	gi|298674778|ref|YP_003726528.1|	-	0.018	14.7	0.0	0.03	14.1	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
DUF5402	PF17393.2	gi|298674778|ref|YP_003726528.1|	-	0.02	14.8	0.0	0.039	13.9	0.0	1.4	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5402)
Cytidylate_kin	PF02224.18	gi|298674778|ref|YP_003726528.1|	-	0.043	13.5	0.0	0.065	13.0	0.0	1.3	1	0	0	1	1	1	0	Cytidylate	kinase
Mg_chelatase	PF01078.21	gi|298674778|ref|YP_003726528.1|	-	0.048	13.0	0.0	0.2	11.0	0.0	1.9	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_22	PF13401.6	gi|298674778|ref|YP_003726528.1|	-	0.067	13.5	0.0	0.18	12.1	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
Prim_Zn_Ribbon	PF08273.12	gi|298674778|ref|YP_003726528.1|	-	0.12	12.7	0.9	4.6	7.6	0.1	2.3	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
Prok-RING_1	PF14446.6	gi|298674778|ref|YP_003726528.1|	-	0.15	12.0	2.7	4	7.5	0.1	2.3	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
PknG_rubred	PF16919.5	gi|298674778|ref|YP_003726528.1|	-	0.19	11.9	0.0	0.67	10.1	0.0	1.8	2	0	0	2	2	2	0	Protein	kinase	G	rubredoxin	domain
Zn_ribbon_recom	PF13408.6	gi|298674778|ref|YP_003726528.1|	-	0.32	11.6	3.3	3.9	8.1	0.4	2.5	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zf-C4_Topoisom	PF01396.19	gi|298674778|ref|YP_003726528.1|	-	0.41	10.5	2.3	5.7	6.8	0.1	2.7	3	0	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
SecY	PF00344.20	gi|298674779|ref|YP_003726529.1|	-	3.6e-68	230.1	23.4	4.3e-68	229.8	23.4	1.1	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.9	gi|298674779|ref|YP_003726529.1|	-	1.4e-11	44.1	0.6	3.8e-11	42.6	0.6	1.8	1	0	0	1	1	1	1	Plug	domain	of	Sec61p
Ribosomal_L27A	PF00828.19	gi|298674780|ref|YP_003726530.1|	-	2.2e-22	80.1	2.0	2.7e-22	79.8	2.0	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
FAM153	PF15722.5	gi|298674780|ref|YP_003726530.1|	-	0.12	12.7	0.0	0.14	12.5	0.0	1.1	1	0	0	1	1	1	0	FAM153	family
Ribosomal_L30	PF00327.20	gi|298674781|ref|YP_003726531.1|	-	6.7e-14	51.5	0.2	1.6e-13	50.3	0.2	1.7	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5_C	PF03719.15	gi|298674782|ref|YP_003726532.1|	-	1.8e-23	81.7	0.2	3e-23	81.1	0.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.20	gi|298674782|ref|YP_003726532.1|	-	2.3e-23	81.9	0.8	2.3e-23	81.9	0.8	1.8	2	0	0	2	2	2	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_L5e	PF17144.4	gi|298674783|ref|YP_003726533.1|	-	1.2e-30	106.6	0.1	2.4e-21	76.4	0.0	2.2	1	1	1	2	2	2	2	Ribosomal	large	subunit	proteins	60S	L5,	and	50S	L18
Ribosomal_L18p	PF00861.22	gi|298674783|ref|YP_003726533.1|	-	0.0004	20.7	0.0	0.00052	20.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	L18	of	archaea,	bacteria,	mitoch.	and	chloroplast
Ribosomal_L19e	PF01280.20	gi|298674784|ref|YP_003726534.1|	-	3.2e-57	192.7	7.0	3.5e-57	192.5	7.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
Ribosomal_L32e	PF01655.18	gi|298674785|ref|YP_003726535.1|	-	4e-37	126.9	0.1	6.2e-37	126.3	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L6	PF00347.23	gi|298674786|ref|YP_003726536.1|	-	3.3e-25	88.6	0.3	8.8e-12	45.5	0.0	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
Ribosomal_S8	PF00410.19	gi|298674787|ref|YP_003726537.1|	-	2e-27	95.6	0.0	2.4e-27	95.4	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_S14	PF00253.21	gi|298674788|ref|YP_003726538.1|	-	2.7e-14	52.6	4.2	2.9e-14	52.5	4.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
MRNIP	PF15749.5	gi|298674788|ref|YP_003726538.1|	-	0.0015	19.2	1.0	0.0015	19.2	1.0	1.1	1	0	0	1	1	1	1	MRN-interacting	protein
zf-P11	PF03854.14	gi|298674788|ref|YP_003726538.1|	-	0.0041	16.8	1.1	0.0051	16.5	1.1	1.1	1	0	0	1	1	1	1	P-11	zinc	finger
DUF1451	PF07295.11	gi|298674788|ref|YP_003726538.1|	-	0.013	15.5	0.9	0.014	15.5	0.9	1.1	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
Ribosomal_L37ae	PF01780.19	gi|298674788|ref|YP_003726538.1|	-	0.015	15.4	2.4	0.016	15.3	2.4	1.1	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.7	gi|298674788|ref|YP_003726538.1|	-	1.1	9.3	8.7	5.4	7.1	8.5	1.9	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
Ribosomal_L5_C	PF00673.21	gi|298674789|ref|YP_003726539.1|	-	1.7e-28	98.6	0.0	2.5e-28	98.1	0.0	1.3	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.19	gi|298674789|ref|YP_003726539.1|	-	3.6e-21	75.3	0.1	6.2e-21	74.5	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L5
Ribosomal_S4e	PF00900.20	gi|298674790|ref|YP_003726540.1|	-	6.2e-21	74.1	0.9	1e-20	73.4	0.9	1.4	1	0	0	1	1	1	1	Ribosomal	family	S4e
S4	PF01479.25	gi|298674790|ref|YP_003726540.1|	-	7.1e-11	41.7	0.1	1.5e-10	40.6	0.1	1.6	1	0	0	1	1	1	1	S4	domain
RS4NT	PF08071.12	gi|298674790|ref|YP_003726540.1|	-	1.7e-09	37.7	2.9	2.6e-09	37.0	2.9	1.3	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
KOW	PF00467.29	gi|298674790|ref|YP_003726540.1|	-	0.00012	21.9	0.1	0.00035	20.4	0.1	1.8	1	0	0	1	1	1	1	KOW	motif
DUF3994	PF13159.6	gi|298674790|ref|YP_003726540.1|	-	0.0019	18.7	0.2	0.0033	17.9	0.2	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3994)
S4_2	PF13275.6	gi|298674790|ref|YP_003726540.1|	-	0.031	14.1	0.0	0.11	12.3	0.0	1.9	2	0	0	2	2	2	0	S4	domain
DUF3912	PF13051.6	gi|298674790|ref|YP_003726540.1|	-	0.061	13.6	0.6	0.18	12.1	0.3	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3912)
Ribosomal_L26	PF16906.5	gi|298674791|ref|YP_003726541.1|	-	5e-31	107.0	0.4	6e-31	106.7	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	L26	eukaryotic,	L24P	archaeal
KOW	PF00467.29	gi|298674791|ref|YP_003726541.1|	-	1.9e-05	24.5	3.5	4.1e-05	23.4	3.5	1.6	1	0	0	1	1	1	1	KOW	motif
Ribosomal_L14	PF00238.19	gi|298674792|ref|YP_003726542.1|	-	1.5e-36	125.1	0.5	1.7e-36	125.0	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
Ribosomal_S17	PF00366.20	gi|298674793|ref|YP_003726543.1|	-	7.8e-28	96.4	1.1	9.6e-28	96.1	1.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_S17_N	PF16205.5	gi|298674793|ref|YP_003726543.1|	-	0.0003	21.1	0.0	0.0013	19.0	0.0	2.0	2	0	0	2	2	2	1	Ribosomal_S17	N-terminal
UPF0086	PF01868.16	gi|298674794|ref|YP_003726544.1|	-	4.9e-23	80.8	0.0	5.6e-23	80.7	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Ribosomal_L29	PF00831.23	gi|298674795|ref|YP_003726545.1|	-	3.4e-17	62.2	0.2	4e-17	61.9	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
Ribosomal_S3_C	PF00189.20	gi|298674796|ref|YP_003726546.1|	-	5e-22	78.2	0.5	1.1e-21	77.1	0.5	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.17	gi|298674796|ref|YP_003726546.1|	-	4.5e-16	58.4	0.0	1.2e-15	57.1	0.0	1.8	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.29	gi|298674796|ref|YP_003726546.1|	-	0.015	15.1	0.7	0.11	12.4	0.2	2.5	2	0	0	2	2	2	0	KH	domain
KH_4	PF13083.6	gi|298674796|ref|YP_003726546.1|	-	0.36	10.7	0.1	0.36	10.7	0.1	2.4	2	1	1	3	3	3	0	KH	domain
Ribosomal_L22	PF00237.19	gi|298674797|ref|YP_003726547.1|	-	6.3e-30	103.5	0.4	7.5e-30	103.2	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Acyl-thio_N	PF12590.8	gi|298674797|ref|YP_003726547.1|	-	0.11	13.1	0.4	0.26	11.8	0.1	1.8	1	1	1	2	2	2	0	Acyl-ATP	thioesterase
Ribosomal_S19	PF00203.21	gi|298674798|ref|YP_003726548.1|	-	6.9e-23	80.3	0.3	1e-22	79.8	0.3	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S19
Citrate_synt	PF00285.21	gi|298674798|ref|YP_003726548.1|	-	0.14	11.2	0.0	0.14	11.2	0.0	1.1	1	0	0	1	1	1	0	Citrate	synthase,	C-terminal	domain
Ribosomal_L2_C	PF03947.18	gi|298674799|ref|YP_003726549.1|	-	2.6e-44	150.5	0.5	4e-44	149.8	0.5	1.3	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.23	gi|298674799|ref|YP_003726549.1|	-	9.7e-15	54.3	0.3	3.4e-14	52.5	0.0	2.1	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.20	gi|298674800|ref|YP_003726550.1|	-	2.2e-17	63.2	2.9	5.4e-17	61.9	2.9	1.5	1	1	0	1	1	1	1	Ribosomal	protein	L23
Asp_protease_2	PF13650.6	gi|298674800|ref|YP_003726550.1|	-	0.018	15.7	0.0	0.021	15.5	0.0	1.1	1	0	0	1	1	1	0	Aspartyl	protease
PRE_C2HC	PF07530.11	gi|298674800|ref|YP_003726550.1|	-	0.045	13.9	0.1	0.061	13.5	0.1	1.2	1	0	0	1	1	1	0	Associated	with	zinc	fingers
gag-asp_proteas	PF13975.6	gi|298674800|ref|YP_003726550.1|	-	0.047	14.2	0.1	0.053	14.1	0.1	1.2	1	0	0	1	1	1	0	gag-polyprotein	putative	aspartyl	protease
Ribosomal_L4	PF00573.22	gi|298674801|ref|YP_003726551.1|	-	4.7e-47	160.2	1.2	5.4e-47	160.0	1.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Glyco_hydro_52	PF03512.13	gi|298674801|ref|YP_003726551.1|	-	0.088	11.7	0.0	0.12	11.4	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	52
GutM	PF06923.11	gi|298674801|ref|YP_003726551.1|	-	0.11	12.6	0.1	0.19	11.8	0.1	1.3	1	0	0	1	1	1	0	Glucitol	operon	activator	protein	(GutM)
Ribosomal_L3	PF00297.22	gi|298674802|ref|YP_003726552.1|	-	8.7e-88	294.8	0.4	1.2e-87	294.3	0.4	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L3
POR	PF01558.18	gi|298674803|ref|YP_003726553.1|	-	9.2e-38	130.1	0.0	1.1e-37	129.8	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_C	PF02775.21	gi|298674804|ref|YP_003726554.1|	-	4.4e-28	98.0	0.1	9.5e-28	96.9	0.1	1.6	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|298674804|ref|YP_003726554.1|	-	9.3e-12	45.2	0.0	1.6e-11	44.4	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.27	gi|298674804|ref|YP_003726554.1|	-	2.9e-09	36.3	11.7	0.00012	21.7	2.2	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298674804|ref|YP_003726554.1|	-	2.9e-06	27.3	7.9	8.6e-06	25.8	7.9	1.9	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674804|ref|YP_003726554.1|	-	1.4e-05	25.2	10.6	3.8e-05	23.8	10.6	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674804|ref|YP_003726554.1|	-	2.1e-05	24.3	15.8	0.00047	20.1	2.5	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298674804|ref|YP_003726554.1|	-	5.8e-05	23.1	10.4	0.00018	21.6	10.4	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298674804|ref|YP_003726554.1|	-	0.00024	21.4	12.6	0.0068	16.8	2.6	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674804|ref|YP_003726554.1|	-	0.0023	18.5	13.6	0.051	14.2	12.9	2.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298674804|ref|YP_003726554.1|	-	0.011	15.8	17.2	0.016	15.3	2.2	3.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298674804|ref|YP_003726554.1|	-	0.1	13.2	8.5	2.4	8.7	0.9	2.6	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298674804|ref|YP_003726554.1|	-	0.42	11.5	7.5	0.91	10.4	0.9	2.7	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298674804|ref|YP_003726554.1|	-	0.55	11.0	14.6	0.61	10.9	1.8	3.4	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.6	gi|298674804|ref|YP_003726554.1|	-	5	8.1	12.9	2.2	9.3	2.0	2.7	1	1	3	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.7	gi|298674804|ref|YP_003726554.1|	-	8.1	7.6	13.9	13	7.0	4.5	3.1	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Aldedh	PF00171.22	gi|298674805|ref|YP_003726555.1|	-	8.4e-15	54.2	0.0	1e-12	47.4	0.0	2.2	2	0	0	2	2	2	2	Aldehyde	dehydrogenase	family
AA_kinase	PF00696.28	gi|298674806|ref|YP_003726556.1|	-	3.9e-41	141.2	0.3	5.3e-41	140.8	0.3	1.2	1	0	0	1	1	1	1	Amino	acid	kinase	family
PUA	PF01472.20	gi|298674806|ref|YP_003726556.1|	-	2.4e-17	62.7	0.4	1.3e-16	60.3	0.1	2.2	2	0	0	2	2	2	1	PUA	domain
MCPsignal	PF00015.21	gi|298674807|ref|YP_003726557.1|	-	2.5e-53	180.4	67.6	8.3e-52	175.5	24.7	5.2	2	1	4	6	6	6	5	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
dCache_1	PF02743.18	gi|298674807|ref|YP_003726557.1|	-	6.6e-31	108.0	5.0	6.6e-31	108.0	5.0	4.3	3	2	1	4	4	4	1	Cache	domain
HAMP	PF00672.25	gi|298674807|ref|YP_003726557.1|	-	2.6e-13	50.1	0.2	8.7e-11	42.0	0.0	4.5	3	1	0	3	3	3	1	HAMP	domain
DUF948	PF06103.11	gi|298674807|ref|YP_003726557.1|	-	3.5e-09	36.8	49.3	0.028	14.6	6.5	6.8	3	2	2	5	5	5	3	Bacterial	protein	of	unknown	function	(DUF948)
PhageMin_Tail	PF10145.9	gi|298674807|ref|YP_003726557.1|	-	1.5e-06	28.2	35.6	0.0045	16.9	14.1	2.6	2	0	0	2	2	2	2	Phage-related	minor	tail	protein
IFT57	PF10498.9	gi|298674807|ref|YP_003726557.1|	-	0.00023	20.3	10.9	0.00023	20.3	10.9	3.7	3	1	0	3	3	3	1	Intra-flagellar	transport	protein	57
DUF1664	PF07889.12	gi|298674807|ref|YP_003726557.1|	-	0.00053	20.0	6.1	0.00053	20.0	6.1	4.8	3	2	2	5	5	4	2	Protein	of	unknown	function	(DUF1664)
dCache_2	PF08269.11	gi|298674807|ref|YP_003726557.1|	-	0.00058	19.1	0.0	0.00058	19.1	0.0	4.8	4	2	1	5	5	5	1	Cache	domain
sCache_2	PF17200.4	gi|298674807|ref|YP_003726557.1|	-	0.004	17.0	0.1	0.004	17.0	0.1	4.6	3	2	0	4	4	4	1	Single	Cache	domain	2
DUF1848	PF08902.11	gi|298674807|ref|YP_003726557.1|	-	0.0049	16.6	9.2	0.0068	16.2	0.1	3.4	3	2	0	3	3	3	1	Domain	of	unknown	function	(DUF1848)
TMP_2	PF06791.13	gi|298674807|ref|YP_003726557.1|	-	0.011	15.4	34.3	0.039	13.6	9.8	3.3	1	1	1	3	3	3	0	Prophage	tail	length	tape	measure	protein
GnsAB_toxin	PF08178.11	gi|298674807|ref|YP_003726557.1|	-	0.059	13.3	1.6	0.16	11.9	0.3	2.5	2	0	0	2	2	1	0	GnsA/GnsB	toxin	of	bacterial	toxin-antitoxin	system
Laminin_II	PF06009.12	gi|298674807|ref|YP_003726557.1|	-	0.066	13.2	54.8	0.56	10.2	9.5	5.5	3	2	2	5	5	5	0	Laminin	Domain	II
Maff2	PF12750.7	gi|298674807|ref|YP_003726557.1|	-	0.073	12.9	0.0	0.19	11.6	0.0	1.7	1	0	0	1	1	1	0	Maff2	family
EzrA	PF06160.12	gi|298674807|ref|YP_003726557.1|	-	0.076	11.2	40.2	0.044	12.0	10.8	3.9	2	1	1	3	3	3	0	Septation	ring	formation	regulator,	EzrA
Syntaxin-6_N	PF09177.11	gi|298674807|ref|YP_003726557.1|	-	0.098	13.2	43.0	0.45	11.1	5.6	5.6	3	2	3	6	6	6	0	Syntaxin	6,	N-terminal
Prominin	PF05478.11	gi|298674807|ref|YP_003726557.1|	-	0.18	9.8	34.2	0.029	12.4	10.5	3.6	2	1	2	4	4	4	0	Prominin
DUF773	PF05600.12	gi|298674807|ref|YP_003726557.1|	-	0.18	10.5	26.6	0.12	11.1	9.5	3.2	2	1	1	3	3	3	0	CDK5	regulatory	subunit-associated	protein	3
Sec34	PF04136.15	gi|298674807|ref|YP_003726557.1|	-	0.2	11.5	42.7	0.4	10.5	1.3	5.4	3	2	3	6	6	6	0	Sec34-like	family
WXG100	PF06013.12	gi|298674807|ref|YP_003726557.1|	-	0.39	11.0	44.4	0.14	12.4	1.6	6.3	4	2	3	7	7	6	0	Proteins	of	100	residues	with	WXG
AIP3	PF03915.13	gi|298674807|ref|YP_003726557.1|	-	0.83	8.7	49.6	0.023	13.8	15.9	2.7	2	1	1	3	3	3	0	Actin	interacting	protein	3
NPV_P10	PF05531.12	gi|298674807|ref|YP_003726557.1|	-	1.5	9.3	45.1	0.3	11.6	3.8	6.6	2	2	3	5	5	4	0	Nucleopolyhedrovirus	P10	protein
MAD	PF05557.13	gi|298674807|ref|YP_003726557.1|	-	1.8	6.8	45.5	0.14	10.5	17.5	2.5	2	1	1	3	3	3	0	Mitotic	checkpoint	protein
FPP	PF05911.11	gi|298674807|ref|YP_003726557.1|	-	2.4	6.3	44.2	0.01	14.1	34.8	1.7	2	0	0	2	2	2	0	Filament-like	plant	protein,	long	coiled-coil
Fib_alpha	PF08702.10	gi|298674807|ref|YP_003726557.1|	-	2.9	8.1	49.4	0.27	11.4	8.5	5.3	3	2	2	5	5	5	0	Fibrinogen	alpha/beta	chain	family
Serine_rich	PF08824.10	gi|298674807|ref|YP_003726557.1|	-	4.3	7.3	25.8	2.9	7.9	10.1	3.5	1	1	2	3	3	3	0	Serine	rich	protein	interaction	domain
DUF812	PF05667.11	gi|298674807|ref|YP_003726557.1|	-	5.7	5.7	51.5	0.16	10.8	25.7	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF812)
Vps53_N	PF04100.12	gi|298674807|ref|YP_003726557.1|	-	6	5.7	43.8	0.27	10.1	8.9	4.3	2	2	3	5	5	5	0	Vps53-like,	N-terminal
Med9	PF07544.13	gi|298674807|ref|YP_003726557.1|	-	9.5	6.4	18.5	0.77	9.9	0.7	4.9	4	1	0	4	4	4	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
CheW	PF01584.19	gi|298674808|ref|YP_003726558.1|	-	1.8e-42	144.3	3.2	2.1e-42	144.1	3.2	1.1	1	0	0	1	1	1	1	CheW-like	domain
Response_reg	PF00072.24	gi|298674809|ref|YP_003726559.1|	-	2.7e-30	104.8	3.5	3e-30	104.7	3.5	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
2-ph_phosp	PF04029.14	gi|298674809|ref|YP_003726559.1|	-	0.085	12.0	0.0	0.27	10.4	0.0	1.6	1	1	1	2	2	2	0	2-phosphosulpholactate	phosphatase
CheB_methylest	PF01339.17	gi|298674810|ref|YP_003726560.1|	-	5.7e-60	201.9	0.1	1.4e-59	200.6	0.1	1.7	1	0	0	1	1	1	1	CheB	methylesterase
Response_reg	PF00072.24	gi|298674810|ref|YP_003726560.1|	-	9.1e-22	77.4	0.1	2.6e-21	75.9	0.1	1.8	1	0	0	1	1	1	1	Response	regulator	receiver	domain
ATP-synt_ab	PF00006.25	gi|298674810|ref|YP_003726560.1|	-	0.027	14.1	0.0	0.053	13.2	0.0	1.4	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
CheW	PF01584.19	gi|298674811|ref|YP_003726561.1|	-	2.8e-22	78.8	1.6	6.1e-22	77.8	1.6	1.6	1	0	0	1	1	1	1	CheW-like	domain
P2	PF07194.11	gi|298674811|ref|YP_003726561.1|	-	7.3e-22	77.2	3.8	7.3e-22	77.2	3.8	3.1	1	1	1	2	2	2	1	P2	response	regulator	binding	domain
Hpt	PF01627.23	gi|298674811|ref|YP_003726561.1|	-	1e-19	70.5	0.6	3.5e-19	68.9	0.6	2.0	1	0	0	1	1	1	1	Hpt	domain
HATPase_c	PF02518.26	gi|298674811|ref|YP_003726561.1|	-	5e-19	68.9	0.2	2.3e-18	66.7	0.2	2.2	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
H-kinase_dim	PF02895.14	gi|298674811|ref|YP_003726561.1|	-	1.1e-13	51.4	3.2	1.1e-13	51.4	3.2	3.3	3	0	0	3	3	3	1	Signal	transducing	histidine	kinase,	homodimeric	domain
HATPase_c_3	PF13589.6	gi|298674811|ref|YP_003726561.1|	-	0.00062	19.6	0.2	0.00062	19.6	0.2	2.7	3	1	0	3	3	3	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_2	PF13581.6	gi|298674811|ref|YP_003726561.1|	-	0.011	15.7	0.0	0.082	12.9	0.0	2.3	2	0	0	2	2	2	0	Histidine	kinase-like	ATPase	domain
ATP11	PF06644.11	gi|298674811|ref|YP_003726561.1|	-	2	8.2	8.6	5.1	6.8	4.6	2.4	2	0	0	2	2	2	0	ATP11	protein
DASH_Dam1	PF08653.10	gi|298674811|ref|YP_003726561.1|	-	4.2	7.2	8.9	1.8	8.5	1.3	3.5	3	0	0	3	3	3	0	DASH	complex	subunit	Dam1
CPSF100_C	PF13299.6	gi|298674811|ref|YP_003726561.1|	-	6	7.0	10.6	22	5.2	4.4	2.6	2	0	0	2	2	2	0	Cleavage	and	polyadenylation	factor	2	C-terminal
CheC	PF04509.12	gi|298674812|ref|YP_003726562.1|	-	5.9e-11	42.1	0.9	1.3e-09	37.8	0.5	2.4	2	0	0	2	2	2	1	CheC-like	family
CheX	PF13690.6	gi|298674812|ref|YP_003726562.1|	-	0.00073	19.7	0.8	0.0042	17.2	0.3	2.4	1	1	1	2	2	2	1	Chemotaxis	phosphatase	CheX
CheR	PF01739.18	gi|298674813|ref|YP_003726563.1|	-	2.2e-55	187.2	0.2	2.7e-55	186.9	0.2	1.1	1	0	0	1	1	1	1	CheR	methyltransferase,	SAM	binding	domain
CheR_N	PF03705.15	gi|298674813|ref|YP_003726563.1|	-	8.7e-13	47.8	0.3	1.6e-12	47.0	0.3	1.5	1	0	0	1	1	1	1	CheR	methyltransferase,	all-alpha	domain
Methyltransf_12	PF08242.12	gi|298674813|ref|YP_003726563.1|	-	4.4e-06	27.3	0.1	1.8e-05	25.4	0.1	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298674813|ref|YP_003726563.1|	-	1.7e-05	24.6	0.1	0.00048	20.0	0.1	2.4	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298674813|ref|YP_003726563.1|	-	0.0022	18.6	0.0	0.68	10.6	0.0	2.4	2	0	0	2	2	2	2	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298674813|ref|YP_003726563.1|	-	0.0052	17.4	0.0	1.4	9.7	0.0	2.4	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298674813|ref|YP_003726563.1|	-	0.039	13.8	0.0	0.056	13.3	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
CheC	PF04509.12	gi|298674814|ref|YP_003726564.1|	-	1.7e-16	59.8	2.5	2.1e-07	30.7	0.2	2.5	2	0	0	2	2	2	2	CheC-like	family
CheX	PF13690.6	gi|298674814|ref|YP_003726564.1|	-	7.6e-10	38.8	1.7	4.2e-06	26.8	0.2	2.2	2	0	0	2	2	2	2	Chemotaxis	phosphatase	CheX
DUF5415	PF17436.2	gi|298674817|ref|YP_003726567.1|	-	0.13	12.3	0.0	6.9	6.8	0.0	2.3	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5415)
Cytochrom_C_asm	PF01578.20	gi|298674818|ref|YP_003726568.1|	-	3.5e-34	118.4	25.0	3.5e-34	118.4	25.0	2.4	2	1	0	2	2	2	1	Cytochrome	C	assembly	protein
DUF4051	PF13260.6	gi|298674818|ref|YP_003726568.1|	-	0.01	15.5	1.5	0.01	15.5	1.5	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4051)
CcmF_C	PF16327.5	gi|298674819|ref|YP_003726569.1|	-	1e-15	57.9	4.3	1.6e-15	57.2	4.3	1.2	1	0	0	1	1	1	1	Cytochrome	c-type	biogenesis	protein	CcmF	C-terminal
ResB	PF05140.14	gi|298674819|ref|YP_003726569.1|	-	0.0013	17.5	1.1	0.015	14.1	0.1	2.1	1	1	1	2	2	2	2	ResB-like	family
CarS-like	PF01864.17	gi|298674820|ref|YP_003726570.1|	-	1.7e-47	161.7	3.9	1.9e-47	161.5	3.9	1.0	1	0	0	1	1	1	1	CDP-archaeol	synthase
CTP_transf_1	PF01148.20	gi|298674820|ref|YP_003726570.1|	-	2.6e-05	24.1	6.7	2.6e-05	24.1	6.7	2.0	1	1	1	2	2	2	1	Cytidylyltransferase	family
Pribosyltran	PF00156.27	gi|298674821|ref|YP_003726571.1|	-	2.1e-13	50.1	0.7	2.9e-13	49.6	0.7	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|298674821|ref|YP_003726571.1|	-	0.027	13.9	0.0	0.038	13.4	0.0	1.2	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
Flagellar_put	PF12611.8	gi|298674821|ref|YP_003726571.1|	-	0.069	12.9	0.1	0.14	12.0	0.1	1.6	1	0	0	1	1	1	0	Putative	flagellar
SH3_3	PF08239.11	gi|298674821|ref|YP_003726571.1|	-	0.074	13.3	0.1	0.2	12.0	0.1	1.7	1	0	0	1	1	1	0	Bacterial	SH3	domain
GARS_A	PF01071.19	gi|298674822|ref|YP_003726572.1|	-	1.2e-57	194.8	0.8	1.7e-57	194.3	0.1	1.6	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.15	gi|298674822|ref|YP_003726572.1|	-	6.4e-26	91.0	0.1	1.5e-25	89.8	0.1	1.7	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.16	gi|298674822|ref|YP_003726572.1|	-	8e-14	51.7	0.4	3.9e-13	49.5	0.1	2.3	3	0	0	3	3	3	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_4	PF13535.6	gi|298674822|ref|YP_003726572.1|	-	0.0003	20.4	0.0	0.0017	18.0	0.0	2.1	2	0	0	2	2	2	1	ATP-grasp	domain
GSH-S_ATP	PF02955.16	gi|298674822|ref|YP_003726572.1|	-	0.0013	18.1	0.0	0.0029	17.0	0.0	1.5	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp_3	PF02655.14	gi|298674822|ref|YP_003726572.1|	-	0.012	15.7	0.0	0.024	14.7	0.0	1.6	1	0	0	1	1	1	0	ATP-grasp	domain
GFO_IDH_MocA	PF01408.22	gi|298674822|ref|YP_003726572.1|	-	0.037	14.8	0.0	0.13	13.1	0.0	2.0	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
ATP-grasp	PF02222.22	gi|298674822|ref|YP_003726572.1|	-	0.14	11.7	0.0	0.38	10.3	0.0	1.7	2	0	0	2	2	2	0	ATP-grasp	domain
CoA_binding_3	PF13727.6	gi|298674822|ref|YP_003726572.1|	-	0.15	12.1	0.0	0.26	11.3	0.0	1.4	1	0	0	1	1	1	0	CoA-binding	domain
OTCace	PF00185.24	gi|298674823|ref|YP_003726573.1|	-	7.5e-59	198.3	0.0	1.2e-58	197.7	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.21	gi|298674823|ref|YP_003726573.1|	-	2.1e-54	183.6	0.1	3.3e-54	182.9	0.1	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
DUF2281	PF10047.9	gi|298674823|ref|YP_003726573.1|	-	0.16	12.7	0.1	0.5	11.1	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2281)
ATP-sulfurylase	PF01747.17	gi|298674824|ref|YP_003726574.1|	-	2.9e-88	294.9	0.0	3.7e-88	294.5	0.0	1.1	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.6	gi|298674824|ref|YP_003726574.1|	-	9.1e-51	171.7	0.0	1.4e-50	171.1	0.0	1.3	1	0	0	1	1	1	1	PUA-like	domain
PAPS_reduct	PF01507.19	gi|298674825|ref|YP_003726575.1|	-	2.6e-52	177.4	0.0	3.2e-52	177.1	0.0	1.1	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
HcyBio	PF01837.16	gi|298674826|ref|YP_003726576.1|	-	5.9e-110	367.4	0.0	6.7e-110	367.2	0.0	1.0	1	0	0	1	1	1	1	Homocysteine	biosynthesis	enzyme,	sulfur-incorporation
Fer4_9	PF13187.6	gi|298674826|ref|YP_003726576.1|	-	0.00017	21.7	10.7	0.00034	20.7	10.7	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298674826|ref|YP_003726576.1|	-	0.00075	19.9	3.7	0.45	11.0	0.0	2.4	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298674826|ref|YP_003726576.1|	-	0.0023	17.9	11.0	0.016	15.3	3.1	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674826|ref|YP_003726576.1|	-	0.017	15.7	14.7	0.11	13.1	13.4	2.4	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298674826|ref|YP_003726576.1|	-	0.12	12.6	3.6	0.23	11.7	3.6	1.4	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298674826|ref|YP_003726576.1|	-	0.16	12.1	12.1	0.3	11.2	11.6	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674826|ref|YP_003726576.1|	-	0.22	11.7	12.8	0.86	9.8	2.5	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|298674826|ref|YP_003726576.1|	-	0.48	11.4	8.8	2.7	9.0	0.6	2.6	2	0	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|298674826|ref|YP_003726576.1|	-	0.5	11.0	12.7	5.2	7.8	3.7	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298674826|ref|YP_003726576.1|	-	0.61	10.7	12.9	3.4	8.3	3.1	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298674826|ref|YP_003726576.1|	-	0.7	9.8	12.8	3.4	7.6	1.1	3.3	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298674826|ref|YP_003726576.1|	-	3.7	7.8	13.7	4.7	7.4	2.8	2.4	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
TPP_enzyme_C	PF02775.21	gi|298674827|ref|YP_003726577.1|	-	5.2e-19	68.5	0.0	1.6e-18	67.0	0.0	1.8	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_N	PF02776.18	gi|298674827|ref|YP_003726577.1|	-	2.9e-11	43.3	0.0	1.1e-10	41.4	0.0	1.8	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
DUF4179	PF13786.6	gi|298674828|ref|YP_003726578.1|	-	0.0033	17.8	0.0	0.041	14.4	0.1	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4179)
COXG	PF06240.13	gi|298674828|ref|YP_003726578.1|	-	0.084	12.6	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
Lon_C	PF05362.13	gi|298674829|ref|YP_003726579.1|	-	1.4e-33	116.2	5.8	2.3e-33	115.5	5.8	1.4	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA_32	PF13654.6	gi|298674829|ref|YP_003726579.1|	-	5.5e-28	98.0	0.0	3.5e-19	69.0	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.21	gi|298674829|ref|YP_003726579.1|	-	8.5e-16	58.0	0.1	1.4e-09	37.7	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.26	gi|298674829|ref|YP_003726579.1|	-	3.7e-15	56.0	0.0	5.5e-08	32.7	0.0	2.7	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_5	PF07728.14	gi|298674829|ref|YP_003726579.1|	-	7.2e-12	45.5	0.0	4.8e-05	23.4	0.0	2.7	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
ChlI	PF13541.6	gi|298674829|ref|YP_003726579.1|	-	7.2e-11	42.0	1.0	1.6e-10	40.9	1.0	1.6	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
AAA	PF00004.29	gi|298674829|ref|YP_003726579.1|	-	1.1e-07	32.3	0.0	0.012	16.0	0.0	2.8	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
MCM	PF00493.23	gi|298674829|ref|YP_003726579.1|	-	2.2e-06	27.0	0.3	0.1	11.6	0.0	3.2	3	0	0	3	3	3	2	MCM	P-loop	domain
RuvB_N	PF05496.12	gi|298674829|ref|YP_003726579.1|	-	1.5e-05	24.8	0.1	0.015	15.1	0.0	2.4	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|298674829|ref|YP_003726579.1|	-	3.8e-05	24.0	0.0	0.0044	17.3	0.0	2.7	3	0	0	3	3	2	1	AAA	domain
AAA_7	PF12775.7	gi|298674829|ref|YP_003726579.1|	-	7.6e-05	22.3	0.0	0.0008	19.0	0.0	2.3	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
AAA_3	PF07726.11	gi|298674829|ref|YP_003726579.1|	-	0.00014	21.7	0.0	0.45	10.4	0.0	2.7	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activ_2	PF14532.6	gi|298674829|ref|YP_003726579.1|	-	0.00027	21.1	0.0	0.97	9.6	0.0	2.6	2	0	0	2	2	2	2	Sigma-54	interaction	domain
TIP49	PF06068.13	gi|298674829|ref|YP_003726579.1|	-	0.00029	20.2	0.0	0.75	8.9	0.0	2.4	2	0	0	2	2	2	2	TIP49	P-loop	domain
AAA_19	PF13245.6	gi|298674829|ref|YP_003726579.1|	-	0.00052	20.4	0.4	0.0056	17.0	0.4	2.4	1	1	0	1	1	1	1	AAA	domain
MCM_lid	PF17855.1	gi|298674829|ref|YP_003726579.1|	-	0.00084	19.7	0.1	0.0022	18.4	0.1	1.6	1	0	0	1	1	1	1	MCM	AAA-lid	domain
AAA_PrkA	PF08298.11	gi|298674829|ref|YP_003726579.1|	-	0.003	16.5	0.4	1.8	7.4	0.0	2.6	3	0	0	3	3	3	2	PrkA	AAA	domain
PhoH	PF02562.16	gi|298674829|ref|YP_003726579.1|	-	0.0036	16.8	0.0	0.0089	15.5	0.0	1.6	1	0	0	1	1	1	1	PhoH-like	protein
AAA_30	PF13604.6	gi|298674829|ref|YP_003726579.1|	-	0.0037	17.0	0.0	0.022	14.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.17	gi|298674829|ref|YP_003726579.1|	-	0.0091	15.7	0.0	0.032	14.0	0.0	1.8	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_33	PF13671.6	gi|298674829|ref|YP_003726579.1|	-	0.011	15.9	0.0	0.024	14.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
SepSecS	PF05889.13	gi|298674829|ref|YP_003726579.1|	-	0.016	13.9	0.7	0.031	13.0	0.7	1.4	1	0	0	1	1	1	0	O-phosphoseryl-tRNA(Sec)	selenium	transferase,	SepSecS
Parvo_NS1	PF01057.17	gi|298674829|ref|YP_003726579.1|	-	0.019	14.0	0.0	0.033	13.3	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
DUF815	PF05673.13	gi|298674829|ref|YP_003726579.1|	-	0.024	13.8	0.0	0.051	12.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
VirB3	PF05101.13	gi|298674829|ref|YP_003726579.1|	-	0.026	14.8	1.2	0.05	13.8	1.2	1.4	1	0	0	1	1	1	0	Type	IV	secretory	pathway,	VirB3-like	protein
AAA_10	PF12846.7	gi|298674829|ref|YP_003726579.1|	-	0.026	13.4	0.0	0.056	12.4	0.0	1.5	1	0	0	1	1	1	0	AAA-like	domain
AAA_16	PF13191.6	gi|298674829|ref|YP_003726579.1|	-	0.033	14.6	0.0	0.1	13.0	0.0	1.8	2	0	0	2	2	1	0	AAA	ATPase	domain
ABC_tran	PF00005.27	gi|298674829|ref|YP_003726579.1|	-	0.039	14.5	0.0	0.13	12.8	0.0	1.8	1	0	0	1	1	1	0	ABC	transporter
AAA_18	PF13238.6	gi|298674829|ref|YP_003726579.1|	-	0.084	13.4	0.0	1.1	9.9	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
Styelin	PF17562.2	gi|298674829|ref|YP_003726579.1|	-	0.11	12.8	0.0	0.39	11.1	0.0	1.9	1	0	0	1	1	1	0	Styelin
DUF4118	PF13493.6	gi|298674829|ref|YP_003726579.1|	-	0.12	12.2	0.5	0.51	10.2	0.2	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4118)
PmbA_TldD	PF01523.16	gi|298674830|ref|YP_003726580.1|	-	9.1e-70	235.7	0.7	1.3e-69	235.2	0.7	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.16	gi|298674831|ref|YP_003726581.1|	-	3.6e-53	181.2	1.0	4.9e-53	180.8	1.0	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Radical_SAM	PF04055.21	gi|298674832|ref|YP_003726582.1|	-	1.6e-08	35.1	0.6	3.1e-07	30.9	0.5	2.3	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|298674832|ref|YP_003726582.1|	-	5.7e-05	23.4	0.2	0.00018	21.8	0.1	1.8	1	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
DNA_ligase_A_M	PF01068.21	gi|298674833|ref|YP_003726583.1|	-	1.4e-61	207.7	0.1	2.8e-61	206.7	0.1	1.5	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.14	gi|298674833|ref|YP_003726583.1|	-	3.2e-37	128.5	0.1	2.6e-36	125.6	0.0	2.2	1	1	1	2	2	2	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.15	gi|298674833|ref|YP_003726583.1|	-	3e-17	63.0	0.0	8.1e-17	61.6	0.0	1.8	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
RNA_ligase	PF09414.10	gi|298674833|ref|YP_003726583.1|	-	3.7e-06	27.4	0.0	1e-05	25.9	0.0	1.8	1	0	0	1	1	1	1	RNA	ligase
mRNA_cap_enzyme	PF01331.19	gi|298674833|ref|YP_003726583.1|	-	0.006	16.4	0.2	3.6	7.4	0.0	2.8	2	1	1	3	3	3	2	mRNA	capping	enzyme,	catalytic	domain
Homoserine_dh	PF00742.19	gi|298674834|ref|YP_003726584.1|	-	1.5e-57	194.3	0.5	2.3e-57	193.7	0.2	1.5	2	0	0	2	2	2	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.16	gi|298674834|ref|YP_003726584.1|	-	2e-11	44.6	0.0	3.8e-11	43.7	0.0	1.5	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.21	gi|298674834|ref|YP_003726584.1|	-	4.9e-06	26.5	0.4	1.1e-05	25.3	0.4	1.6	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|298674834|ref|YP_003726584.1|	-	0.01	16.1	0.1	0.021	15.1	0.1	1.6	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
DXP_reductoisom	PF02670.16	gi|298674834|ref|YP_003726584.1|	-	0.02	15.6	0.1	0.043	14.5	0.1	1.6	1	0	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
ACT	PF01842.25	gi|298674835|ref|YP_003726585.1|	-	4.4e-06	26.3	0.2	1.3e-05	24.8	0.0	1.8	2	0	0	2	2	2	1	ACT	domain
CarboxypepD_reg	PF13620.6	gi|298674836|ref|YP_003726586.1|	-	4.1e-06	27.0	0.3	6.6e-06	26.3	0.3	1.3	1	0	0	1	1	1	1	Carboxypeptidase	regulatory-like	domain
HTH_24	PF13412.6	gi|298674836|ref|YP_003726586.1|	-	0.00012	21.5	0.0	0.00026	20.5	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
CarbopepD_reg_2	PF13715.6	gi|298674836|ref|YP_003726586.1|	-	0.00031	20.7	0.4	0.00056	19.9	0.4	1.5	1	0	0	1	1	1	1	CarboxypepD_reg-like	domain
HTH_27	PF13463.6	gi|298674836|ref|YP_003726586.1|	-	0.00048	20.6	0.1	0.0011	19.4	0.1	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.7	gi|298674836|ref|YP_003726586.1|	-	0.00051	19.9	0.0	0.0011	18.8	0.0	1.5	1	1	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|298674836|ref|YP_003726586.1|	-	0.0016	18.4	0.0	0.007	16.3	0.0	1.9	1	1	1	2	2	2	1	MarR	family
Fe_dep_repress	PF01325.19	gi|298674836|ref|YP_003726586.1|	-	0.002	18.3	0.0	0.0034	17.5	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TrmB	PF01978.19	gi|298674836|ref|YP_003726586.1|	-	0.0077	16.1	0.1	0.013	15.4	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.6	gi|298674836|ref|YP_003726586.1|	-	0.0084	16.3	0.0	0.015	15.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.6	gi|298674836|ref|YP_003726586.1|	-	0.016	15.2	0.0	0.031	14.3	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
RSN1_TM	PF13967.6	gi|298674836|ref|YP_003726586.1|	-	0.14	11.9	0.5	5.3	6.8	0.2	2.2	2	0	0	2	2	2	0	Late	exocytosis,	associated	with	Golgi	transport
TMEM154	PF15102.6	gi|298674836|ref|YP_003726586.1|	-	1.7	8.5	4.7	0.3	11.0	0.3	2.0	2	1	0	2	2	2	0	TMEM154	protein	family
Apolipoprotein	PF01442.18	gi|298674837|ref|YP_003726587.1|	-	0.015	15.2	40.1	0.18	11.7	9.6	2.3	1	1	1	2	2	2	0	Apolipoprotein	A1/A4/E	domain
DUF1664	PF07889.12	gi|298674837|ref|YP_003726587.1|	-	2.6	8.1	42.5	0.091	12.8	2.1	5.0	3	2	2	5	5	5	0	Protein	of	unknown	function	(DUF1664)
M16C_assoc	PF08367.11	gi|298674838|ref|YP_003726588.1|	-	0.024	13.8	0.6	0.028	13.6	0.6	1.0	1	0	0	1	1	1	0	Peptidase	M16C	associated
SMBP	PF16785.5	gi|298674839|ref|YP_003726589.1|	-	0.01	16.0	0.0	0.01	16.0	0.0	3.3	1	1	2	3	3	3	0	Small	metal-binding	protein
FlgM	PF04316.13	gi|298674839|ref|YP_003726589.1|	-	10	6.6	8.7	1.7	9.1	0.2	3.6	3	1	1	4	4	4	0	Anti-sigma-28	factor,	FlgM
Peptidase_M48	PF01435.18	gi|298674840|ref|YP_003726590.1|	-	1.1e-38	133.0	0.1	1.5e-38	132.5	0.1	1.2	1	0	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.11	gi|298674840|ref|YP_003726590.1|	-	7.4e-05	22.1	0.0	0.00015	21.1	0.0	1.4	1	0	0	1	1	1	1	BlaR1	peptidase	M56
Yip1	PF04893.17	gi|298674840|ref|YP_003726590.1|	-	0.067	12.9	6.8	0.31	10.7	1.1	2.2	2	0	0	2	2	2	0	Yip1	domain
AIM24	PF01987.17	gi|298674841|ref|YP_003726591.1|	-	4.5e-67	225.7	0.0	5.1e-67	225.6	0.0	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
Thymidylat_synt	PF00303.19	gi|298674842|ref|YP_003726592.1|	-	1.1e-19	70.7	0.1	1.3e-19	70.4	0.1	1.1	1	0	0	1	1	1	1	Thymidylate	synthase
EPSP_synthase	PF00275.20	gi|298674843|ref|YP_003726593.1|	-	3e-112	375.4	0.1	3.5e-112	375.2	0.1	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
Cu_amine_oxidN1	PF07833.11	gi|298674843|ref|YP_003726593.1|	-	0.035	14.6	0.1	0.32	11.5	0.0	2.6	2	0	0	2	2	2	0	Copper	amine	oxidase	N-terminal	domain
YscJ_FliF	PF01514.17	gi|298674843|ref|YP_003726593.1|	-	0.11	12.2	0.1	4.2	7.0	0.0	2.5	3	0	0	3	3	3	0	Secretory	protein	of	YscJ/FliF	family
Sigma70_r1_1	PF03979.14	gi|298674843|ref|YP_003726593.1|	-	0.15	12.1	0.1	15	5.7	0.0	3.1	3	0	0	3	3	3	0	Sigma-70	factor,	region	1.1
Lig_C	PF18330.1	gi|298674843|ref|YP_003726593.1|	-	0.16	12.0	0.0	0.32	11.0	0.0	1.5	1	0	0	1	1	1	0	Ligase	Pab1020	C-terminal	region
MCR_alpha_N	PF02745.15	gi|298674844|ref|YP_003726594.1|	-	8.9e-147	487.6	0.5	1.2e-146	487.3	0.5	1.1	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	alpha	subunit,	N-terminal	domain
MCR_alpha	PF02249.17	gi|298674844|ref|YP_003726594.1|	-	2.1e-66	222.2	4.5	3.4e-66	221.5	3.6	1.9	2	0	0	2	2	2	1	Methyl-coenzyme	M	reductase	alpha	subunit,	C-terminal	domain
BofC_C	PF08955.10	gi|298674844|ref|YP_003726594.1|	-	0.015	15.4	0.0	0.11	12.6	0.0	2.1	2	0	0	2	2	2	0	BofC	C-terminal	domain
MCR_gamma	PF02240.16	gi|298674845|ref|YP_003726595.1|	-	1.5e-116	387.9	0.3	1.7e-116	387.7	0.3	1.0	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	gamma	subunit
MCR_C	PF04609.12	gi|298674846|ref|YP_003726596.1|	-	2.9e-09	36.4	0.5	4.3e-09	35.9	0.5	1.4	1	1	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	C
MCR_D	PF02505.14	gi|298674847|ref|YP_003726597.1|	-	9.8e-55	184.3	0.0	1.1e-54	184.1	0.0	1.0	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	D
MCR_beta	PF02241.18	gi|298674848|ref|YP_003726598.1|	-	7.3e-138	458.2	3.1	7.3e-138	458.2	3.1	1.4	2	0	0	2	2	2	1	Methyl-coenzyme	M	reductase	beta	subunit,	C-terminal	domain
MCR_beta_N	PF02783.15	gi|298674848|ref|YP_003726598.1|	-	1.2e-82	276.0	1.3	2e-82	275.2	1.3	1.4	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	beta	subunit,	N-terminal	domain
IL12	PF03039.14	gi|298674848|ref|YP_003726598.1|	-	0.097	12.0	0.0	0.16	11.3	0.0	1.3	1	0	0	1	1	1	0	Interleukin-12	alpha	subunit
Radical_SAM	PF04055.21	gi|298674850|ref|YP_003726600.1|	-	4e-18	66.4	7.0	2.3e-15	57.4	5.9	3.4	2	1	0	2	2	2	1	Radical	SAM	superfamily
Limkain-b1	PF11608.8	gi|298674850|ref|YP_003726600.1|	-	0.084	12.9	0.0	0.18	11.9	0.0	1.5	1	0	0	1	1	1	0	Limkain	b1
MIX	PF18529.1	gi|298674850|ref|YP_003726600.1|	-	0.15	11.7	0.0	0.39	10.4	0.0	1.7	1	0	0	1	1	1	0	Mitochondrial	membrane-anchored	proteins
Fer4_12	PF13353.6	gi|298674850|ref|YP_003726600.1|	-	1.6	9.0	4.8	11	6.3	4.8	2.3	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
PolC_DP2	PF03833.13	gi|298674851|ref|YP_003726601.1|	-	0	1309.9	0.0	0	1309.1	0.0	1.4	2	0	0	2	2	2	1	DNA	polymerase	II	large	subunit	DP2
Zn_ribbon_SprT	PF17283.2	gi|298674851|ref|YP_003726601.1|	-	2.6	8.0	12.0	3.3	7.7	3.2	3.3	3	0	0	3	3	3	0	SprT-like	zinc	ribbon	domain
Methyltransf_11	PF08241.12	gi|298674852|ref|YP_003726602.1|	-	3.2e-23	82.2	0.0	4.8e-23	81.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298674852|ref|YP_003726602.1|	-	9.7e-22	77.4	0.0	1.2e-21	77.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298674852|ref|YP_003726602.1|	-	4.8e-21	75.3	0.0	1e-20	74.2	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298674852|ref|YP_003726602.1|	-	3.6e-15	56.2	0.0	4.6e-15	55.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298674852|ref|YP_003726602.1|	-	6e-15	55.2	0.0	2.1e-14	53.4	0.0	1.6	1	1	1	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.12	gi|298674852|ref|YP_003726602.1|	-	2.2e-14	54.0	0.0	3.4e-14	53.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|298674852|ref|YP_003726602.1|	-	7.3e-06	25.5	0.1	3.4e-05	23.3	0.0	1.8	1	1	1	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_2	PF00891.18	gi|298674852|ref|YP_003726602.1|	-	4.7e-05	22.8	0.0	5.8e-05	22.5	0.0	1.1	1	0	0	1	1	1	1	O-methyltransferase	domain
PCMT	PF01135.19	gi|298674852|ref|YP_003726602.1|	-	0.00041	20.2	0.0	0.0006	19.6	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.14	gi|298674852|ref|YP_003726602.1|	-	0.00056	19.5	0.0	0.0038	16.8	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_8	PF05148.15	gi|298674852|ref|YP_003726602.1|	-	0.0012	18.7	0.0	0.0048	16.8	0.0	1.9	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_32	PF13679.6	gi|298674852|ref|YP_003726602.1|	-	0.0013	18.8	0.0	0.0015	18.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_9	PF08003.11	gi|298674852|ref|YP_003726602.1|	-	0.0015	17.5	0.0	0.0017	17.3	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
MetW	PF07021.12	gi|298674852|ref|YP_003726602.1|	-	0.0029	17.2	0.0	0.0045	16.6	0.0	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_4	PF02390.17	gi|298674852|ref|YP_003726602.1|	-	0.0047	16.4	0.3	0.1	12.1	0.0	2.1	2	0	0	2	2	2	1	Putative	methyltransferase
PrmA	PF06325.13	gi|298674852|ref|YP_003726602.1|	-	0.006	16.0	0.0	0.016	14.6	0.0	1.7	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_15	PF09445.10	gi|298674852|ref|YP_003726602.1|	-	0.0068	16.0	0.1	0.013	15.0	0.1	1.3	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
DOT1	PF08123.13	gi|298674852|ref|YP_003726602.1|	-	0.0089	15.6	0.0	0.035	13.6	0.0	1.9	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
NodS	PF05401.11	gi|298674852|ref|YP_003726602.1|	-	0.013	15.2	0.0	0.017	14.8	0.0	1.1	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
Fibrillarin	PF01269.17	gi|298674852|ref|YP_003726602.1|	-	0.041	13.0	0.0	0.078	12.1	0.0	1.4	1	0	0	1	1	1	0	Fibrillarin
N6_N4_Mtase	PF01555.18	gi|298674852|ref|YP_003726602.1|	-	0.057	13.1	0.7	0.59	9.8	0.4	2.5	2	1	0	2	2	2	0	DNA	methylase
Bin3	PF06859.12	gi|298674852|ref|YP_003726602.1|	-	0.058	14.0	0.0	0.12	13.0	0.0	1.5	1	0	0	1	1	1	0	Bicoid-interacting	protein	3	(Bin3)
Rhodanese	PF00581.20	gi|298674853|ref|YP_003726603.1|	-	1e-20	74.2	0.0	2.2e-20	73.2	0.0	1.6	1	0	0	1	1	1	1	Rhodanese-like	domain
Rubrerythrin	PF02915.17	gi|298674853|ref|YP_003726603.1|	-	1.6e-10	41.5	7.3	4.9e-05	23.7	1.5	2.5	1	1	0	2	2	2	2	Rubrerythrin
Ferritin_2	PF13668.6	gi|298674853|ref|YP_003726603.1|	-	1.3e-09	38.4	1.6	3.7e-05	23.9	0.3	2.2	2	0	0	2	2	2	2	Ferritin-like	domain
DUF2383	PF09537.10	gi|298674853|ref|YP_003726603.1|	-	0.0038	17.6	4.4	0.0083	16.5	0.6	2.5	2	1	1	3	3	3	1	Domain	of	unknown	function	(DUF2383)
Ferritin	PF00210.24	gi|298674853|ref|YP_003726603.1|	-	0.022	14.7	6.2	0.3	11.0	6.2	2.4	1	1	0	1	1	1	0	Ferritin-like	domain
Exo84_C	PF16528.5	gi|298674853|ref|YP_003726603.1|	-	0.023	14.5	2.3	0.4	10.5	0.0	2.2	2	0	0	2	2	2	0	Exocyst	component	84	C-terminal
Rhodanese	PF00581.20	gi|298674854|ref|YP_003726604.1|	-	2.8e-25	88.9	0.1	8.2e-14	52.0	0.1	3.1	3	0	0	3	3	3	2	Rhodanese-like	domain
Lactamase_B	PF00753.27	gi|298674854|ref|YP_003726604.1|	-	3.2e-09	37.1	0.5	1.1e-07	32.1	0.5	2.6	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
SLATT_1	PF18181.1	gi|298674855|ref|YP_003726605.1|	-	0.01	15.8	0.0	0.011	15.6	0.0	1.0	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	1
DUF443	PF04276.12	gi|298674855|ref|YP_003726605.1|	-	0.032	14.0	2.7	0.036	13.9	2.7	1.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF443)
DUF872	PF05915.12	gi|298674855|ref|YP_003726605.1|	-	0.21	11.8	1.1	0.35	11.0	1.1	1.4	1	1	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF872)
Sua5_yciO_yrdC	PF01300.18	gi|298674856|ref|YP_003726606.1|	-	7.2e-55	185.3	0.0	1.2e-54	184.5	0.0	1.4	1	0	0	1	1	1	1	Telomere	recombination
SUA5	PF03481.13	gi|298674856|ref|YP_003726606.1|	-	4.8e-29	101.6	0.0	7.1e-29	101.1	0.0	1.3	1	0	0	1	1	1	1	Putative	GTP-binding	controlling	metal-binding
RuBisCO_large	PF00016.20	gi|298674857|ref|YP_003726607.1|	-	1.2e-101	339.9	0.6	1.5e-101	339.6	0.6	1.1	1	0	0	1	1	1	1	Ribulose	bisphosphate	carboxylase	large	chain,	catalytic	domain
RuBisCO_large_N	PF02788.16	gi|298674857|ref|YP_003726607.1|	-	6.3e-44	149.0	0.0	1.8e-43	147.5	0.0	1.8	2	0	0	2	2	2	1	Ribulose	bisphosphate	carboxylase	large	chain,	N-terminal	domain
Lactamase_B	PF00753.27	gi|298674858|ref|YP_003726608.1|	-	1e-21	77.9	0.0	1.2e-21	77.6	0.0	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|298674858|ref|YP_003726608.1|	-	2e-06	27.4	0.0	2.7e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|298674858|ref|YP_003726608.1|	-	0.0037	16.7	0.2	0.012	15.1	0.1	1.7	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|298674858|ref|YP_003726608.1|	-	0.0041	17.0	0.1	0.042	13.8	0.0	2.2	3	0	0	3	3	3	1	Beta-lactamase	superfamily	domain
PAP2_3	PF14378.6	gi|298674859|ref|YP_003726609.1|	-	1.9e-10	40.8	21.8	1.2e-09	38.1	21.8	2.2	1	1	0	1	1	1	1	PAP2	superfamily
PAP2	PF01569.21	gi|298674859|ref|YP_003726609.1|	-	2.1e-10	40.5	1.8	2.1e-10	40.5	1.8	2.6	3	0	0	3	3	3	1	PAP2	superfamily
PAP2_C	PF14360.6	gi|298674859|ref|YP_003726609.1|	-	0.032	14.8	7.8	0.032	14.8	7.8	3.0	3	1	0	3	3	3	0	PAP2	superfamily	C-terminal
Elf1	PF05129.13	gi|298674859|ref|YP_003726609.1|	-	0.12	12.4	1.3	0.2	11.7	1.3	1.2	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
P5-ATPase	PF12409.8	gi|298674859|ref|YP_003726609.1|	-	7.4	6.7	5.9	46	4.1	2.0	2.9	3	0	0	3	3	3	0	P5-type	ATPase	cation	transporter
PhaG_MnhG_YufB	PF03334.14	gi|298674860|ref|YP_003726610.1|	-	7.6e-26	90.2	12.9	8.9e-26	89.9	12.9	1.1	1	0	0	1	1	1	1	Na+/H+	antiporter	subunit
DUF5345	PF17280.2	gi|298674860|ref|YP_003726610.1|	-	0.44	10.5	2.9	2.1	8.4	0.1	2.1	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5345)
MrpF_PhaF	PF04066.13	gi|298674861|ref|YP_003726611.1|	-	5.5e-19	68.3	6.1	5.5e-19	68.3	6.1	2.0	2	0	0	2	2	2	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
DUF2393	PF09624.10	gi|298674861|ref|YP_003726611.1|	-	1.5	8.8	5.1	0.84	9.6	1.2	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2393)
Deltameth_res	PF16020.5	gi|298674861|ref|YP_003726611.1|	-	5.3	7.0	5.6	1.5	8.7	0.2	2.4	3	0	0	3	3	3	0	Deltamethrin	resistance
MNHE	PF01899.16	gi|298674862|ref|YP_003726612.1|	-	7e-43	145.9	0.3	7.8e-43	145.7	0.3	1.0	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
Proton_antipo_M	PF00361.20	gi|298674863|ref|YP_003726613.1|	-	3e-70	236.7	28.3	3e-70	236.7	28.3	2.8	3	1	0	3	3	3	1	Proton-conducting	membrane	transporter
NADHdeh_related	PF10125.9	gi|298674863|ref|YP_003726613.1|	-	1.6e-06	27.7	4.4	1.6e-06	27.7	4.4	2.7	3	0	0	3	3	3	1	NADH	dehydrogenase	I,	subunit	N	related	protein
Proton_antipo_N	PF00662.20	gi|298674863|ref|YP_003726613.1|	-	1.5e-05	25.0	0.6	1.5e-05	25.0	0.6	4.5	6	1	1	7	7	7	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q2	PF00420.24	gi|298674864|ref|YP_003726614.1|	-	3.4e-35	119.8	3.3	4.4e-35	119.5	3.3	1.1	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
MnhB	PF04039.13	gi|298674865|ref|YP_003726615.1|	-	5.8e-34	117.1	11.3	6.5e-34	116.9	11.3	1.0	1	0	0	1	1	1	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
Proton_antipo_M	PF00361.20	gi|298674866|ref|YP_003726616.1|	-	7.3e-69	232.2	20.0	7.3e-69	232.2	20.0	3.0	2	1	1	3	3	3	1	Proton-conducting	membrane	transporter
DUF4040	PF13244.6	gi|298674866|ref|YP_003726616.1|	-	2.9e-19	69.0	10.2	2.9e-19	69.0	10.2	4.5	5	0	0	5	5	5	1	Domain	of	unknown	function	(DUF4040)
Proton_antipo_N	PF00662.20	gi|298674866|ref|YP_003726616.1|	-	3e-11	43.2	0.7	3e-11	43.2	0.7	4.7	5	1	0	5	5	5	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
ArsA_HSP20	PF17886.1	gi|298674867|ref|YP_003726617.1|	-	3.4e-09	36.1	0.0	4.8e-09	35.6	0.0	1.2	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
HSP20	PF00011.21	gi|298674867|ref|YP_003726617.1|	-	5.1e-07	29.8	0.7	1.8e-05	24.8	0.7	2.2	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.16	gi|298674867|ref|YP_003726617.1|	-	0.0024	18.8	0.2	0.0043	18.0	0.2	1.4	1	0	0	1	1	1	1	CS	domain
GvpH	PF05455.11	gi|298674867|ref|YP_003726617.1|	-	0.046	13.8	0.4	0.064	13.3	0.4	1.3	1	0	0	1	1	1	0	GvpH
DUF2892	PF11127.8	gi|298674868|ref|YP_003726618.1|	-	4.3e-12	45.9	0.5	5.6e-12	45.5	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2892)
DUF3017	PF11222.8	gi|298674868|ref|YP_003726618.1|	-	0.0034	17.6	0.1	0.0045	17.2	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3017)
MFS_1	PF07690.16	gi|298674869|ref|YP_003726619.1|	-	3.2e-50	171.0	69.3	4.8e-45	154.0	35.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sarcoglycan_1	PF04790.13	gi|298674869|ref|YP_003726619.1|	-	0.13	11.6	0.3	0.24	10.7	0.3	1.4	1	0	0	1	1	1	0	Sarcoglycan	complex	subunit	protein
PfkB	PF00294.24	gi|298674870|ref|YP_003726620.1|	-	5.4e-38	131.0	0.0	7.3e-38	130.6	0.0	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Methyltransf_11	PF08241.12	gi|298674871|ref|YP_003726621.1|	-	8.5e-22	77.6	0.0	1.5e-21	76.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298674871|ref|YP_003726621.1|	-	2.1e-17	63.6	0.0	5.6e-17	62.2	0.0	1.8	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298674871|ref|YP_003726621.1|	-	1.6e-14	54.0	0.0	3.8e-14	52.8	0.0	1.7	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298674871|ref|YP_003726621.1|	-	5.9e-12	45.7	0.0	7.4e-12	45.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|298674871|ref|YP_003726621.1|	-	1.5e-11	44.1	0.2	2.4e-11	43.4	0.0	1.3	2	0	0	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
Ubie_methyltran	PF01209.18	gi|298674871|ref|YP_003726621.1|	-	2.1e-09	37.0	0.0	3.9e-09	36.2	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.12	gi|298674871|ref|YP_003726621.1|	-	1.1e-08	35.7	0.0	2.4e-08	34.6	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_29	PF03141.16	gi|298674871|ref|YP_003726621.1|	-	5.6e-06	25.2	0.0	1e-05	24.3	0.0	1.3	2	0	0	2	2	2	1	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_2	PF00891.18	gi|298674871|ref|YP_003726621.1|	-	0.00017	20.9	0.0	0.00029	20.2	0.0	1.3	1	0	0	1	1	1	1	O-methyltransferase	domain
Methyltransf_8	PF05148.15	gi|298674871|ref|YP_003726621.1|	-	0.00022	21.2	0.0	0.0025	17.7	0.0	2.1	1	1	0	1	1	1	1	Hypothetical	methyltransferase
TehB	PF03848.14	gi|298674871|ref|YP_003726621.1|	-	0.00029	20.3	0.0	0.00048	19.6	0.0	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_9	PF08003.11	gi|298674871|ref|YP_003726621.1|	-	0.00046	19.2	0.0	0.0017	17.3	0.0	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1698)
MetW	PF07021.12	gi|298674871|ref|YP_003726621.1|	-	0.00074	19.2	0.0	0.0012	18.4	0.0	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_PK	PF05891.12	gi|298674871|ref|YP_003726621.1|	-	0.0015	18.1	0.0	0.0031	17.0	0.0	1.5	2	0	0	2	2	2	1	AdoMet	dependent	proline	di-methyltransferase
MTS	PF05175.14	gi|298674871|ref|YP_003726621.1|	-	0.0025	17.4	0.0	0.0046	16.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_32	PF13679.6	gi|298674871|ref|YP_003726621.1|	-	0.0067	16.4	0.1	0.014	15.4	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|298674871|ref|YP_003726621.1|	-	0.039	13.9	0.0	0.073	13.0	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Orn_Arg_deC_N	PF02784.16	gi|298674871|ref|YP_003726621.1|	-	0.039	13.3	0.0	0.061	12.7	0.0	1.3	1	0	0	1	1	1	0	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
PCMT	PF01135.19	gi|298674871|ref|YP_003726621.1|	-	0.054	13.2	0.0	0.1	12.3	0.0	1.5	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
FtsJ	PF01728.19	gi|298674871|ref|YP_003726621.1|	-	0.061	13.4	0.0	0.1	12.7	0.0	1.5	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
CPL	PF08144.11	gi|298674871|ref|YP_003726621.1|	-	0.07	13.5	0.0	20	5.5	0.0	2.4	2	1	0	2	2	2	0	CPL	(NUC119)	domain
UPF0146	PF03686.13	gi|298674871|ref|YP_003726621.1|	-	0.1	12.5	0.0	0.17	11.8	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0146)
Methyltransf_24	PF13578.6	gi|298674871|ref|YP_003726621.1|	-	0.12	13.4	0.0	0.22	12.6	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298674872|ref|YP_003726622.1|	-	5.2e-16	59.1	0.0	9.5e-16	58.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298674872|ref|YP_003726622.1|	-	2e-10	41.2	0.0	3.4e-10	40.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298674872|ref|YP_003726622.1|	-	9.3e-10	38.5	0.0	1.2e-09	38.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|298674872|ref|YP_003726622.1|	-	1.2e-09	38.8	0.0	2.1e-09	38.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298674872|ref|YP_003726622.1|	-	5e-07	29.3	0.1	8.1e-07	28.6	0.1	1.3	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|298674872|ref|YP_003726622.1|	-	1e-06	28.7	0.0	1.5e-06	28.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|298674872|ref|YP_003726622.1|	-	0.0026	17.3	0.0	0.0039	16.8	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
TehB	PF03848.14	gi|298674872|ref|YP_003726622.1|	-	0.0046	16.4	0.0	0.0079	15.6	0.0	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Bin3	PF06859.12	gi|298674872|ref|YP_003726622.1|	-	0.017	15.7	0.1	0.2	12.3	0.1	2.4	1	1	0	1	1	1	0	Bicoid-interacting	protein	3	(Bin3)
PCMT	PF01135.19	gi|298674872|ref|YP_003726622.1|	-	0.024	14.4	0.0	0.036	13.8	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF1414	PF07208.11	gi|298674872|ref|YP_003726622.1|	-	0.043	13.8	0.1	0.19	11.8	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1414)
MTS	PF05175.14	gi|298674872|ref|YP_003726622.1|	-	0.046	13.3	0.0	0.069	12.7	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
CheR	PF01739.18	gi|298674872|ref|YP_003726622.1|	-	0.053	13.0	0.0	0.12	11.8	0.0	1.5	1	1	1	2	2	2	0	CheR	methyltransferase,	SAM	binding	domain
AdoHcyase	PF05221.17	gi|298674873|ref|YP_003726623.1|	-	6.4e-147	488.5	0.1	7.2e-147	488.3	0.1	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.21	gi|298674873|ref|YP_003726623.1|	-	6e-78	260.5	2.2	8.8e-78	260.0	2.2	1.2	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|298674873|ref|YP_003726623.1|	-	4.3e-06	26.2	0.1	7.9e-06	25.4	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|298674873|ref|YP_003726623.1|	-	0.00043	19.9	0.2	0.0008	19.0	0.2	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
TrkA_N	PF02254.18	gi|298674873|ref|YP_003726623.1|	-	0.001	19.3	0.0	0.0029	17.8	0.0	1.8	1	0	0	1	1	1	1	TrkA-N	domain
NAD_binding_7	PF13241.6	gi|298674873|ref|YP_003726623.1|	-	0.039	14.4	0.4	0.1	13.1	0.2	1.8	2	0	0	2	2	2	0	Putative	NAD(P)-binding
F420_oxidored	PF03807.17	gi|298674873|ref|YP_003726623.1|	-	0.05	14.2	0.0	0.14	12.8	0.0	1.8	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
3HCDH_N	PF02737.18	gi|298674873|ref|YP_003726623.1|	-	0.13	12.1	0.1	0.27	11.1	0.1	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
S-AdoMet_synt_C	PF02773.16	gi|298674874|ref|YP_003726624.1|	-	1.2e-62	210.0	0.1	1.2e-61	206.7	0.0	2.1	2	0	0	2	2	2	1	S-adenosylmethionine	synthetase,	C-terminal	domain
S-AdoMet_synt_M	PF02772.16	gi|298674874|ref|YP_003726624.1|	-	4.2e-40	136.7	0.0	9.3e-40	135.6	0.0	1.6	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase,	central	domain
S-AdoMet_synt_N	PF00438.20	gi|298674874|ref|YP_003726624.1|	-	1.2e-32	112.6	1.5	1.2e-32	112.5	0.3	1.7	2	0	0	2	2	2	1	S-adenosylmethionine	synthetase,	N-terminal	domain
AdoMet_Synthase	PF01941.19	gi|298674874|ref|YP_003726624.1|	-	0.05	12.4	0.0	0.083	11.7	0.0	1.5	1	0	0	1	1	1	0	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
NAD_binding_7	PF13241.6	gi|298674875|ref|YP_003726625.1|	-	1.4e-05	25.4	0.0	3e-05	24.4	0.0	1.5	1	0	0	1	1	1	1	Putative	NAD(P)-binding
NAD_binding_2	PF03446.15	gi|298674875|ref|YP_003726625.1|	-	8.1e-05	22.8	0.0	0.00015	22.0	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.18	gi|298674875|ref|YP_003726625.1|	-	0.00052	19.9	0.0	0.0009	19.2	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|298674875|ref|YP_003726625.1|	-	0.0014	18.0	0.0	0.0023	17.3	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|298674875|ref|YP_003726625.1|	-	0.006	17.1	0.0	0.014	15.9	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
AlaDh_PNT_C	PF01262.21	gi|298674875|ref|YP_003726625.1|	-	0.011	15.0	0.0	0.018	14.3	0.0	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
adh_short	PF00106.25	gi|298674875|ref|YP_003726625.1|	-	0.013	15.0	0.0	0.11	12.0	0.0	2.0	2	0	0	2	2	2	0	short	chain	dehydrogenase
Shikimate_DH	PF01488.20	gi|298674875|ref|YP_003726625.1|	-	0.069	13.2	0.0	0.18	11.9	0.0	1.8	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
TrkA_N	PF02254.18	gi|298674875|ref|YP_003726625.1|	-	0.069	13.4	0.0	0.15	12.4	0.0	1.5	1	0	0	1	1	1	0	TrkA-N	domain
ApbA	PF02558.16	gi|298674875|ref|YP_003726625.1|	-	0.096	12.3	0.0	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
ATP-grasp_3	PF02655.14	gi|298674876|ref|YP_003726626.1|	-	7.2e-15	55.4	0.1	1.2e-14	54.7	0.1	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.13	gi|298674876|ref|YP_003726626.1|	-	1.3e-05	24.8	0.1	2.3e-05	24.0	0.1	1.5	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATPgrasp_Ter	PF15632.6	gi|298674876|ref|YP_003726626.1|	-	0.00013	21.7	0.0	0.00025	20.8	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_4	PF13535.6	gi|298674876|ref|YP_003726626.1|	-	0.00063	19.4	4.3	0.0068	16.0	0.1	2.8	2	1	1	3	3	3	2	ATP-grasp	domain
ATP-grasp	PF02222.22	gi|298674876|ref|YP_003726626.1|	-	0.0029	17.2	0.0	0.005	16.4	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Pyr_redox	PF00070.27	gi|298674876|ref|YP_003726626.1|	-	0.035	14.7	0.0	0.11	13.1	0.0	1.9	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
GARS_A	PF01071.19	gi|298674876|ref|YP_003726626.1|	-	0.16	11.7	1.2	1.9	8.2	0.2	2.9	3	1	1	4	4	4	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
Radical_SAM	PF04055.21	gi|298674877|ref|YP_003726627.1|	-	3.2e-12	47.1	0.0	7.2e-12	46.0	0.0	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|298674877|ref|YP_003726627.1|	-	4.5e-06	26.8	0.1	1.5e-05	25.1	0.1	1.9	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|298674877|ref|YP_003726627.1|	-	1.6e-05	25.2	0.0	3e-05	24.3	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
His_biosynth	PF00977.21	gi|298674877|ref|YP_003726627.1|	-	0.0027	17.2	0.0	0.0055	16.2	0.0	1.5	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
BATS	PF06968.13	gi|298674877|ref|YP_003726627.1|	-	0.037	14.2	0.0	0.15	12.2	0.0	2.0	1	1	0	1	1	1	0	Biotin	and	Thiamin	Synthesis	associated	domain
CUE	PF02845.16	gi|298674877|ref|YP_003726627.1|	-	0.079	12.7	0.2	1.6	8.5	0.0	2.8	3	0	0	3	3	3	0	CUE	domain
tRNA-synt_1e	PF01406.19	gi|298674878|ref|YP_003726628.1|	-	4.8e-98	328.2	2.5	1e-97	327.2	2.5	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.11	gi|298674878|ref|YP_003726628.1|	-	3.6e-19	68.8	2.2	2.1e-09	36.6	0.0	2.6	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(M)
DALR_2	PF09190.11	gi|298674878|ref|YP_003726628.1|	-	1.1e-11	45.0	0.6	3.6e-11	43.4	0.6	1.9	1	0	0	1	1	1	1	DALR	domain
tRNA-synt_1	PF00133.22	gi|298674878|ref|YP_003726628.1|	-	3.6e-07	28.8	0.0	0.0033	15.7	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1f	PF01921.18	gi|298674878|ref|YP_003726628.1|	-	6.5e-07	28.6	0.1	0.011	14.7	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1c	PF00749.21	gi|298674878|ref|YP_003726628.1|	-	0.0016	17.4	1.1	0.0046	15.9	0.2	2.2	2	1	0	3	3	3	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1d	PF00750.19	gi|298674878|ref|YP_003726628.1|	-	0.014	14.4	0.8	0.17	10.8	0.0	2.5	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(R)
QRPTase_C	PF01729.19	gi|298674879|ref|YP_003726629.1|	-	4.4e-29	101.4	0.0	6e-29	101.0	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
NAPRTase_C	PF17956.1	gi|298674879|ref|YP_003726629.1|	-	0.0094	16.4	0.0	0.019	15.4	0.0	1.5	1	0	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	C-terminal	domain
NAPRTase_N	PF17767.1	gi|298674879|ref|YP_003726629.1|	-	0.019	15.3	0.0	3.8	7.9	0.0	2.3	1	1	1	2	2	2	0	Nicotinate	phosphoribosyltransferase	(NAPRTase)	N-terminal	domain
Ribul_P_3_epim	PF00834.19	gi|298674879|ref|YP_003726629.1|	-	0.037	13.4	0.0	0.057	12.8	0.0	1.3	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
TMP-TENI	PF02581.17	gi|298674879|ref|YP_003726629.1|	-	0.04	13.2	0.0	0.063	12.6	0.0	1.3	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase
QRPTase_N	PF02749.16	gi|298674879|ref|YP_003726629.1|	-	0.12	12.4	0.0	0.31	11.1	0.0	1.7	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
DUF561	PF04481.12	gi|298674879|ref|YP_003726629.1|	-	0.16	11.1	0.0	0.28	10.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
ZT_dimer	PF16916.5	gi|298674880|ref|YP_003726630.1|	-	0.003	17.7	0.0	0.0038	17.3	0.0	1.1	1	0	0	1	1	1	1	Dimerisation	domain	of	Zinc	Transporter
PAS_3	PF08447.12	gi|298674881|ref|YP_003726631.1|	-	6.8e-39	132.0	1.9	1.5e-19	70.1	0.2	2.4	2	0	0	2	2	2	2	PAS	fold
GAF_2	PF13185.6	gi|298674881|ref|YP_003726631.1|	-	1.6e-13	51.1	0.0	2.4e-13	50.6	0.0	1.2	1	0	0	1	1	1	1	GAF	domain
PAS_9	PF13426.7	gi|298674881|ref|YP_003726631.1|	-	2e-11	44.0	0.3	4.4e-05	23.7	0.1	2.5	2	0	0	2	2	2	2	PAS	domain
PAS	PF00989.25	gi|298674881|ref|YP_003726631.1|	-	3.9e-09	36.5	0.0	0.0068	16.4	0.0	3.3	3	1	0	3	3	3	2	PAS	fold
GAF_3	PF13492.6	gi|298674881|ref|YP_003726631.1|	-	6.8e-08	32.9	0.0	1e-07	32.4	0.0	1.3	1	0	0	1	1	1	1	GAF	domain
PAS_4	PF08448.10	gi|298674881|ref|YP_003726631.1|	-	4.1e-05	23.8	0.0	0.29	11.4	0.0	2.5	2	0	0	2	2	2	2	PAS	fold
GAF	PF01590.26	gi|298674881|ref|YP_003726631.1|	-	0.00059	20.5	0.0	0.001	19.7	0.0	1.4	1	0	0	1	1	1	1	GAF	domain
PAS_11	PF14598.6	gi|298674881|ref|YP_003726631.1|	-	0.00064	19.8	0.0	0.035	14.2	0.0	2.3	2	0	0	2	2	2	1	PAS	domain
PAS_6	PF08348.11	gi|298674881|ref|YP_003726631.1|	-	0.0018	18.1	0.1	2.2	8.2	0.0	2.4	2	0	0	2	2	2	2	YheO-like	PAS	domain
VanY	PF02557.17	gi|298674881|ref|YP_003726631.1|	-	0.0061	16.4	0.1	0.025	14.4	0.0	2.0	2	0	0	2	2	2	1	D-alanyl-D-alanine	carboxypeptidase
SpoVT_C	PF15714.5	gi|298674881|ref|YP_003726631.1|	-	0.043	13.9	0.1	0.27	11.3	0.0	2.1	2	0	0	2	2	2	0	Stage	V	sporulation	protein	T	C-terminal,	transcription	factor
DUF2385	PF09539.10	gi|298674881|ref|YP_003726631.1|	-	0.19	12.3	0.1	1.3	9.6	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2385)
URO-D	PF01208.17	gi|298674882|ref|YP_003726632.1|	-	3.1e-89	299.5	0.0	3.6e-89	299.3	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Pterin_bind	PF00809.22	gi|298674882|ref|YP_003726632.1|	-	0.13	11.9	0.0	0.5	10.0	0.0	1.9	2	0	0	2	2	2	0	Pterin	binding	enzyme
Gpr1_Fun34_YaaH	PF01184.19	gi|298674883|ref|YP_003726633.1|	-	2.9e-22	79.3	25.3	3.7e-22	79.0	25.3	1.1	1	0	0	1	1	1	1	GPR1/FUN34/yaaH	family
DUF3367	PF11847.8	gi|298674883|ref|YP_003726633.1|	-	3.4	5.4	7.0	4.6	5.0	7.0	1.2	1	0	0	1	1	1	0	Alpha-(1->3)-arabinofuranosyltransferase
MtaB	PF12176.8	gi|298674884|ref|YP_003726634.1|	-	2.1e-232	771.9	4.6	2.4e-232	771.7	4.6	1.0	1	0	0	1	1	1	1	Methanol-cobalamin	methyltransferase	B	subunit
B12-binding	PF02310.19	gi|298674885|ref|YP_003726635.1|	-	1.2e-18	67.3	0.1	1.7e-18	66.8	0.1	1.3	1	0	0	1	1	1	1	B12	binding	domain
B12-binding_2	PF02607.17	gi|298674885|ref|YP_003726635.1|	-	2.7e-15	56.6	0.0	6e-15	55.4	0.0	1.6	1	0	0	1	1	1	1	B12	binding	domain
Ocnus	PF05005.15	gi|298674885|ref|YP_003726635.1|	-	0.0088	16.2	0.0	0.017	15.2	0.0	1.4	1	0	0	1	1	1	1	Janus/Ocnus	family	(Ocnus)
DUF4909	PF16253.5	gi|298674885|ref|YP_003726635.1|	-	0.063	13.1	0.2	0.12	12.2	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4909)
PAS_3	PF08447.12	gi|298674886|ref|YP_003726636.1|	-	4.3e-54	180.8	1.6	1.9e-16	60.1	0.2	5.5	5	0	0	5	5	5	5	PAS	fold
PAS	PF00989.25	gi|298674886|ref|YP_003726636.1|	-	9.9e-36	122.2	0.1	2.5e-07	30.7	0.0	5.4	5	0	0	5	5	5	4	PAS	fold
PAS_9	PF13426.7	gi|298674886|ref|YP_003726636.1|	-	8e-34	116.0	10.3	2.4e-10	40.6	0.1	5.8	5	0	0	5	5	5	4	PAS	domain
GAF_2	PF13185.6	gi|298674886|ref|YP_003726636.1|	-	1.8e-23	83.4	0.0	2.1e-12	47.5	0.0	2.4	2	0	0	2	2	2	2	GAF	domain
PAS_4	PF08448.10	gi|298674886|ref|YP_003726636.1|	-	1.1e-19	70.7	0.0	0.00036	20.8	0.0	4.8	5	0	0	5	5	5	4	PAS	fold
PAS_8	PF13188.7	gi|298674886|ref|YP_003726636.1|	-	2e-19	69.2	0.0	4.9e-06	26.4	0.0	4.0	4	0	0	4	4	4	3	PAS	domain
GAF_3	PF13492.6	gi|298674886|ref|YP_003726636.1|	-	3.1e-09	37.3	0.0	3.1e-06	27.6	0.0	2.4	2	0	0	2	2	2	2	GAF	domain
PAS_11	PF14598.6	gi|298674886|ref|YP_003726636.1|	-	2.5e-05	24.3	0.0	0.69	10.1	0.0	3.9	4	0	0	4	4	4	2	PAS	domain
GAF	PF01590.26	gi|298674886|ref|YP_003726636.1|	-	0.0016	19.1	0.0	0.86	10.2	0.0	2.5	2	0	0	2	2	2	2	GAF	domain
cobW	PF02492.19	gi|298674887|ref|YP_003726637.1|	-	1.7e-39	135.2	0.0	3.3e-39	134.3	0.0	1.5	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
CbiA	PF01656.23	gi|298674887|ref|YP_003726637.1|	-	0.00036	20.6	0.5	0.001	19.1	0.5	2.1	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
SRP54	PF00448.22	gi|298674887|ref|YP_003726637.1|	-	0.0017	18.1	0.3	0.0098	15.5	0.1	2.1	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
CLP1_P	PF16575.5	gi|298674887|ref|YP_003726637.1|	-	0.011	15.6	0.1	6	6.6	0.0	3.1	2	1	1	3	3	3	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
MeaB	PF03308.16	gi|298674887|ref|YP_003726637.1|	-	0.015	14.3	0.2	0.11	11.5	0.1	2.1	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
MobB	PF03205.14	gi|298674887|ref|YP_003726637.1|	-	0.015	15.2	0.0	0.04	13.8	0.0	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KTI12	PF08433.10	gi|298674887|ref|YP_003726637.1|	-	0.019	14.5	0.0	0.05	13.1	0.0	1.7	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.15	gi|298674887|ref|YP_003726637.1|	-	0.049	13.5	0.0	0.15	11.9	0.0	1.9	2	0	0	2	2	2	0	NTPase
ATP_bind_1	PF03029.17	gi|298674887|ref|YP_003726637.1|	-	0.053	13.3	1.6	0.52	10.1	0.0	2.7	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
DUF520	PF04461.13	gi|298674887|ref|YP_003726637.1|	-	0.053	13.6	0.4	12	6.0	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF520)
RACo_C_ter	PF14574.6	gi|298674888|ref|YP_003726638.1|	-	4.1e-71	239.1	0.3	8.1e-71	238.1	0.2	1.6	2	0	0	2	2	2	1	C-terminal	domain	of	RACo	the	ASKHA	domain
Raco_middle	PF17651.1	gi|298674888|ref|YP_003726638.1|	-	1.4e-10	41.1	0.1	3.8e-10	39.7	0.1	1.8	1	0	0	1	1	1	1	RACo	middle	region
Fer4_7	PF12838.7	gi|298674888|ref|YP_003726638.1|	-	0.00018	22.0	4.1	0.0007	20.1	4.4	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674888|ref|YP_003726638.1|	-	0.00027	21.1	3.4	0.00053	20.1	3.4	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674888|ref|YP_003726638.1|	-	0.00088	20.2	5.2	0.62	11.0	1.7	2.7	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.27	gi|298674888|ref|YP_003726638.1|	-	0.0023	17.7	5.0	0.12	12.2	1.6	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298674888|ref|YP_003726638.1|	-	0.0037	17.3	5.1	0.01	15.8	0.9	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298674888|ref|YP_003726638.1|	-	0.01	15.9	7.1	0.034	14.3	7.2	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_11	PF13247.6	gi|298674888|ref|YP_003726638.1|	-	0.026	14.6	0.3	0.075	13.2	0.3	1.7	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298674888|ref|YP_003726638.1|	-	0.047	13.8	6.4	0.058	13.5	2.3	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298674888|ref|YP_003726638.1|	-	0.19	11.9	9.4	3.2	8.0	7.3	3.1	3	1	1	4	4	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298674888|ref|YP_003726638.1|	-	0.62	11.1	10.9	0.33	12.0	4.8	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|298674888|ref|YP_003726638.1|	-	1.1	9.5	7.3	0.079	13.1	1.6	2.1	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|298674888|ref|YP_003726638.1|	-	1.2	9.8	9.0	0.049	14.2	3.0	1.8	2	0	0	2	2	1	0	4Fe-4S	binding	domain
HisKA	PF00512.25	gi|298674889|ref|YP_003726639.1|	-	0.06	13.4	0.0	0.085	12.9	0.0	1.4	1	0	0	1	1	1	0	His	Kinase	A	(phospho-acceptor)	domain
PRP38	PF03371.15	gi|298674889|ref|YP_003726639.1|	-	0.086	12.7	0.1	0.1	12.5	0.1	1.1	1	0	0	1	1	1	0	PRP38	family
PAP2	PF01569.21	gi|298674890|ref|YP_003726640.1|	-	5.4e-19	68.3	9.8	5.4e-19	68.3	9.8	1.8	2	1	0	2	2	2	1	PAP2	superfamily
PAP2_3	PF14378.6	gi|298674890|ref|YP_003726640.1|	-	1.7e-09	37.7	4.1	1.7e-09	37.7	4.1	2.0	1	1	1	2	2	2	1	PAP2	superfamily
PAP2_C	PF14360.6	gi|298674890|ref|YP_003726640.1|	-	0.00058	20.3	1.1	0.00058	20.3	1.1	2.2	2	0	0	2	2	2	1	PAP2	superfamily	C-terminal
DUF1279	PF06916.13	gi|298674890|ref|YP_003726640.1|	-	0.54	10.8	6.9	2.7	8.6	0.8	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1279)
Pyrophosphatase	PF00719.19	gi|298674891|ref|YP_003726641.1|	-	5.2e-55	185.6	0.1	6e-55	185.4	0.1	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
OrfB_Zn_ribbon	PF07282.11	gi|298674892|ref|YP_003726642.1|	-	1.4e-25	89.0	1.7	8.6e-25	86.5	1.0	2.5	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298674892|ref|YP_003726642.1|	-	2.2e-09	37.6	1.3	2.2e-09	37.6	1.3	1.6	2	0	0	2	2	2	1	Probable	transposase
HypA	PF01155.19	gi|298674892|ref|YP_003726642.1|	-	0.018	15.1	0.1	0.033	14.2	0.1	1.5	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DNA_RNApol_7kD	PF03604.13	gi|298674892|ref|YP_003726642.1|	-	0.042	13.5	6.1	0.15	11.8	6.1	1.9	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.12	gi|298674892|ref|YP_003726642.1|	-	0.14	11.7	0.2	0.3	10.6	0.2	1.5	1	0	0	1	1	1	0	TFIIB	zinc-binding
zinc_ribbon_4	PF13717.6	gi|298674892|ref|YP_003726642.1|	-	0.69	9.9	4.1	9.9	6.2	1.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298674892|ref|YP_003726642.1|	-	1.6	8.8	5.3	3.5	7.7	5.3	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|298674892|ref|YP_003726642.1|	-	2.5	7.9	5.6	8.9	6.1	0.4	2.5	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
DnaJ	PF00226.31	gi|298674893|ref|YP_003726643.1|	-	6.5e-23	80.6	0.5	1.2e-22	79.8	0.5	1.4	1	0	0	1	1	1	1	DnaJ	domain
DDE_1	PF03184.19	gi|298674893|ref|YP_003726643.1|	-	0.042	13.5	2.0	0.52	10.0	0.0	2.1	2	0	0	2	2	2	0	DDE	superfamily	endonuclease
Orf78	PF06024.12	gi|298674893|ref|YP_003726643.1|	-	0.05	13.9	1.0	0.96	9.8	1.0	2.2	1	1	0	1	1	1	0	Orf78	(ac78)
RPT	PF13446.6	gi|298674893|ref|YP_003726643.1|	-	0.051	13.5	0.0	0.12	12.4	0.0	1.6	1	0	0	1	1	1	0	A	repeated	domain	in	UCH-protein
Thioredoxin_8	PF13905.6	gi|298674893|ref|YP_003726643.1|	-	0.058	13.7	1.6	7.1	7.0	0.2	2.2	2	0	0	2	2	2	0	Thioredoxin-like
DotU	PF09850.9	gi|298674893|ref|YP_003726643.1|	-	0.098	12.4	0.0	0.14	11.8	0.0	1.2	1	0	0	1	1	1	0	Type	VI	secretion	system	protein	DotU
DUF2150	PF09920.9	gi|298674894|ref|YP_003726644.1|	-	0.064	13.2	0.1	0.28	11.2	0.0	2.1	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2150)
Multi_Drug_Res	PF00893.19	gi|298674895|ref|YP_003726645.1|	-	2e-29	102.1	10.8	2.6e-29	101.7	10.8	1.1	1	0	0	1	1	1	1	Small	Multidrug	Resistance	protein
EamA	PF00892.20	gi|298674895|ref|YP_003726645.1|	-	0.00028	21.0	15.7	0.00073	19.7	15.7	1.6	1	1	0	1	1	1	1	EamA-like	transporter	family
DUF5381	PF17353.2	gi|298674895|ref|YP_003726645.1|	-	0.0018	18.1	3.2	0.0018	18.1	3.2	2.1	1	1	1	2	2	2	1	Family	of	unknown	function	(DUF5381)
TMEM144	PF07857.12	gi|298674895|ref|YP_003726645.1|	-	0.18	10.8	10.5	0.32	9.9	10.5	1.5	1	1	0	1	1	1	0	Transmembrane	family,	TMEM144	of	transporters
CD20	PF04103.15	gi|298674895|ref|YP_003726645.1|	-	0.59	10.2	10.3	4.9	7.2	10.3	1.9	1	1	0	1	1	1	0	CD20-like	family
SLATT_6	PF18169.1	gi|298674895|ref|YP_003726645.1|	-	2.1	7.9	7.9	0.58	9.7	4.7	1.6	1	1	1	2	2	2	0	SMODS	and	SLOG-associating	2TM	effector	domain	6
DUF4383	PF14325.6	gi|298674895|ref|YP_003726645.1|	-	2.5	8.4	10.4	24	5.2	10.6	2.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4383)
DUF2178	PF09946.9	gi|298674896|ref|YP_003726646.1|	-	8.9e-27	93.3	5.6	1e-26	93.2	5.6	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2178)
7TMR-DISM_7TM	PF07695.11	gi|298674896|ref|YP_003726646.1|	-	0.00084	19.3	1.2	0.0011	18.9	1.2	1.2	1	0	0	1	1	1	1	7TM	diverse	intracellular	signalling
DUF3796	PF12676.7	gi|298674896|ref|YP_003726646.1|	-	0.021	15.3	0.2	0.021	15.3	0.2	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3796)
Phage_holin_3_6	PF07332.11	gi|298674896|ref|YP_003726646.1|	-	8.5	6.5	8.6	0.28	11.2	0.5	2.2	2	1	0	2	2	2	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
HTH_3	PF01381.22	gi|298674897|ref|YP_003726647.1|	-	1.6e-18	66.5	0.0	1.8e-18	66.3	0.0	1.0	1	0	0	1	1	1	1	Helix-turn-helix
HTH_26	PF13443.6	gi|298674897|ref|YP_003726647.1|	-	1e-08	35.5	0.0	1.2e-08	35.2	0.0	1.1	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_19	PF12844.7	gi|298674897|ref|YP_003726647.1|	-	4.8e-08	32.9	0.1	5.4e-08	32.8	0.1	1.0	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|298674897|ref|YP_003726647.1|	-	1.6e-06	28.4	0.0	1.9e-06	28.1	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|298674897|ref|YP_003726647.1|	-	0.00031	20.6	0.0	0.00051	19.9	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_25	PF13413.6	gi|298674897|ref|YP_003726647.1|	-	0.0023	17.8	0.0	0.0027	17.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|298674897|ref|YP_003726647.1|	-	0.0065	16.0	0.0	0.0099	15.4	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_Crp_2	PF13545.6	gi|298674897|ref|YP_003726647.1|	-	0.0093	15.9	0.0	0.012	15.5	0.0	1.2	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
YdaS_antitoxin	PF15943.5	gi|298674897|ref|YP_003726647.1|	-	0.044	13.6	0.0	0.05	13.5	0.0	1.2	1	0	0	1	1	1	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
HTH_10	PF04967.12	gi|298674897|ref|YP_003726647.1|	-	0.079	12.8	0.0	0.12	12.1	0.0	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
MarR_2	PF12802.7	gi|298674897|ref|YP_003726647.1|	-	0.11	12.4	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	MarR	family
HTH_38	PF13936.6	gi|298674897|ref|YP_003726647.1|	-	0.13	12.0	0.0	0.18	11.6	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
FMN_red	PF03358.15	gi|298674898|ref|YP_003726648.1|	-	4.8e-23	81.6	0.0	7.3e-23	81.0	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|298674898|ref|YP_003726648.1|	-	1.9e-12	47.3	0.0	2.7e-12	46.8	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
PlyB_C	PF18684.1	gi|298674898|ref|YP_003726648.1|	-	0.041	13.6	0.0	0.061	13.0	0.0	1.1	1	0	0	1	1	1	0	Pleurotolysin	B	C-terminal	domain
Pilin_N	PF07790.11	gi|298674900|ref|YP_003726650.1|	-	0.12	13.3	0.2	0.12	13.3	0.2	3.4	5	0	0	5	5	5	0	Archaeal	Type	IV	pilin,	N-terminal
DUF996	PF06195.13	gi|298674900|ref|YP_003726650.1|	-	3.7	7.8	40.6	0.034	14.4	4.7	3.8	2	2	0	3	3	3	0	Protein	of	unknown	function	(DUF996)
FMN_red	PF03358.15	gi|298674901|ref|YP_003726651.1|	-	8.4e-15	54.8	0.0	1.5e-14	54.1	0.0	1.4	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|298674901|ref|YP_003726651.1|	-	6.3e-08	32.6	0.0	8.9e-08	32.1	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin-like	fold
PEP-utilisers_N	PF05524.13	gi|298674901|ref|YP_003726651.1|	-	0.018	15.2	0.0	0.028	14.6	0.0	1.3	1	0	0	1	1	1	0	PEP-utilising	enzyme,	N-terminal
Methyltransf_2	PF00891.18	gi|298674901|ref|YP_003726651.1|	-	0.14	11.4	0.0	0.22	10.8	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase	domain
OrfB_Zn_ribbon	PF07282.11	gi|298674902|ref|YP_003726652.1|	-	9.3e-25	86.4	0.3	3.5e-24	84.5	0.0	2.2	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298674902|ref|YP_003726652.1|	-	0.00027	21.1	0.4	0.00061	20.0	0.4	1.5	1	0	0	1	1	1	1	Probable	transposase
HypA	PF01155.19	gi|298674902|ref|YP_003726652.1|	-	0.0015	18.5	1.7	0.094	12.7	0.1	2.8	2	1	0	2	2	2	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn_ribbon_17	PF17120.5	gi|298674902|ref|YP_003726652.1|	-	0.02	14.5	0.8	0.042	13.5	0.8	1.5	1	0	0	1	1	1	0	Zinc-ribbon,	C4HC2	type
UPF0547	PF10571.9	gi|298674902|ref|YP_003726652.1|	-	0.032	14.3	4.7	0.16	12.1	0.9	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DZR	PF12773.7	gi|298674902|ref|YP_003726652.1|	-	0.48	10.5	3.1	0.53	10.3	1.7	1.9	2	1	0	2	2	2	0	Double	zinc	ribbon
zinc_ribbon_4	PF13717.6	gi|298674902|ref|YP_003726652.1|	-	0.76	9.8	3.3	2.4	8.1	0.2	3.0	3	0	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|298674902|ref|YP_003726652.1|	-	1.4	8.8	8.2	1.5	8.6	5.4	2.6	2	1	1	3	3	3	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|298674902|ref|YP_003726652.1|	-	1.5	8.6	6.9	0.62	9.8	2.6	2.6	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn_Tnp_IS1595	PF12760.7	gi|298674902|ref|YP_003726652.1|	-	1.5	8.8	5.0	0.63	10.1	0.6	2.3	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|298674902|ref|YP_003726652.1|	-	6.8	6.2	9.7	0.48	9.9	3.4	2.4	3	1	0	3	3	3	0	zinc-ribbon	domain
Sld3_N	PF18523.1	gi|298674903|ref|YP_003726653.1|	-	0.012	15.7	0.2	0.013	15.7	0.2	1.2	1	0	0	1	1	1	0	Sld3	N-terminal	domain
Sld3_N	PF18523.1	gi|298674904|ref|YP_003726654.1|	-	0.089	12.9	0.0	0.089	12.9	0.0	1.4	1	1	0	1	1	1	0	Sld3	N-terminal	domain
HTH_32	PF13565.6	gi|298674905|ref|YP_003726655.1|	-	9.5e-17	61.4	0.4	1.6e-16	60.6	0.4	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_33	PF13592.6	gi|298674905|ref|YP_003726655.1|	-	8.1e-10	38.2	0.0	1.9e-09	37.1	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_29	PF13551.6	gi|298674905|ref|YP_003726655.1|	-	7.6e-09	35.5	0.1	2.3e-08	33.9	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|298674905|ref|YP_003726655.1|	-	4.1e-05	23.2	0.4	0.00041	20.0	0.1	2.5	3	0	0	3	3	3	1	Homeodomain-like	domain
HTH_28	PF13518.6	gi|298674905|ref|YP_003726655.1|	-	0.00062	19.8	0.4	0.0014	18.7	0.2	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
LZ_Tnp_IS481	PF13011.6	gi|298674905|ref|YP_003726655.1|	-	0.0026	18.3	0.1	0.0038	17.7	0.1	1.3	1	0	0	1	1	1	1	leucine-zipper	of	insertion	element	IS481
HTH_Tnp_Tc3_2	PF01498.18	gi|298674905|ref|YP_003726655.1|	-	0.059	13.6	0.0	0.11	12.7	0.0	1.5	1	0	0	1	1	1	0	Transposase
DDE_3	PF13358.6	gi|298674906|ref|YP_003726656.1|	-	1.3e-23	83.4	0.1	1.9e-23	82.9	0.1	1.2	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
DDE_1	PF03184.19	gi|298674906|ref|YP_003726656.1|	-	4.7e-05	23.1	0.0	7.5e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
rve	PF00665.26	gi|298674906|ref|YP_003726656.1|	-	0.0089	16.2	0.0	0.033	14.4	0.0	1.8	1	1	1	2	2	2	1	Integrase	core	domain
GSDH	PF07995.11	gi|298674907|ref|YP_003726657.1|	-	6.8e-34	117.7	0.5	1.5e-32	113.2	0.8	2.3	1	1	1	2	2	2	1	Glucose	/	Sorbosone	dehydrogenase
Aldo_ket_red	PF00248.21	gi|298674908|ref|YP_003726658.1|	-	3.4e-62	210.3	0.0	3.8e-62	210.1	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Big_7	PF17957.1	gi|298674909|ref|YP_003726659.1|	-	0.081	13.7	0.0	0.19	12.5	0.0	1.6	1	0	0	1	1	1	0	Bacterial	Ig	domain
Y_Y_Y	PF07495.13	gi|298674909|ref|YP_003726659.1|	-	0.58	10.2	0.1	0.58	10.2	0.1	2.8	3	1	0	3	3	3	0	Y_Y_Y	domain
Cactin_mid	PF10312.9	gi|298674910|ref|YP_003726660.1|	-	0.027	14.2	0.0	0.033	13.9	0.0	1.1	1	0	0	1	1	1	0	Conserved	mid	region	of	cactin
TNFR_16_TM	PF18422.1	gi|298674910|ref|YP_003726660.1|	-	0.24	11.4	0.2	0.24	11.4	0.2	1.9	2	0	0	2	2	2	0	Tumor	necrosis	factor	receptor	member	16	trans-membrane	domain
DUF523	PF04463.12	gi|298674911|ref|YP_003726661.1|	-	1.1e-33	116.2	0.0	2e-33	115.3	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF523)
DUF1722	PF08349.11	gi|298674911|ref|YP_003726661.1|	-	3.4e-24	85.4	3.0	3.4e-24	85.4	3.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1722)
DUF5598	PF18127.1	gi|298674911|ref|YP_003726661.1|	-	0.02	15.3	5.7	0.033	14.6	2.9	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5598)
TrwB_AAD_bind	PF10412.9	gi|298674911|ref|YP_003726661.1|	-	0.11	11.4	0.0	0.2	10.5	0.0	1.4	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Fasciclin	PF02469.22	gi|298674912|ref|YP_003726662.1|	-	4.2e-79	263.0	1.7	4.9e-39	133.5	0.1	2.1	2	0	0	2	2	2	2	Fasciclin	domain
DUF211	PF02680.14	gi|298674912|ref|YP_003726662.1|	-	0.0014	18.7	11.8	0.0091	16.1	1.1	2.9	2	1	0	2	2	2	2	Uncharacterized	ArCR,	COG1888
SbcCD_C	PF13558.6	gi|298674912|ref|YP_003726662.1|	-	0.17	12.2	0.1	7	7.0	0.0	2.4	2	0	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
DUF5381	PF17353.2	gi|298674913|ref|YP_003726663.1|	-	0.00089	19.1	1.3	0.00089	19.1	1.3	1.3	1	1	0	1	1	1	1	Family	of	unknown	function	(DUF5381)
ECF_trnsprt	PF12822.7	gi|298674913|ref|YP_003726663.1|	-	0.047	13.8	7.1	0.053	13.6	7.1	1.2	1	0	0	1	1	1	0	ECF	transporter,	substrate-specific	component
YyzF	PF14116.6	gi|298674914|ref|YP_003726664.1|	-	0.0031	17.5	0.2	0.0055	16.7	0.2	1.4	1	0	0	1	1	1	1	YyzF-like	protein
Hydantoinase_B	PF02538.14	gi|298674916|ref|YP_003726666.1|	-	1.8e-207	689.8	0.2	3.5e-207	688.9	0.2	1.5	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
Hydantoinase_A	PF01968.18	gi|298674916|ref|YP_003726666.1|	-	1.4e-119	398.7	0.0	3e-119	397.6	0.0	1.6	1	0	0	1	1	1	1	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.13	gi|298674916|ref|YP_003726666.1|	-	4.1e-66	222.1	0.1	1.2e-64	217.3	0.0	2.4	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase	N-terminal	region
F-actin_cap_A	PF01267.17	gi|298674916|ref|YP_003726666.1|	-	0.1	12.0	0.8	0.35	10.3	0.1	2.0	2	0	0	2	2	2	0	F-actin	capping	protein	alpha	subunit
DUF4367	PF14285.6	gi|298674918|ref|YP_003726668.1|	-	1.7e-09	38.1	5.7	1.7e-09	38.1	5.7	3.3	4	1	0	4	4	4	1	Domain	of	unknown	function	(DUF4367)
LolA_like	PF17131.4	gi|298674918|ref|YP_003726668.1|	-	6.5e-09	35.8	1.6	6.3e-06	26.0	0.0	2.5	2	0	0	2	2	2	2	Outer	membrane	lipoprotein-sorting	protein
DUF2092	PF09865.9	gi|298674918|ref|YP_003726668.1|	-	0.00073	18.9	0.3	0.0035	16.7	0.0	2.1	2	0	0	2	2	2	1	Predicted	periplasmic	protein	(DUF2092)
LolA	PF03548.15	gi|298674918|ref|YP_003726668.1|	-	0.0029	17.3	2.3	0.05	13.3	0.3	2.3	1	1	1	2	2	2	1	Outer	membrane	lipoprotein	carrier	protein	LolA
DUF1571	PF07608.11	gi|298674918|ref|YP_003726668.1|	-	0.038	13.4	0.6	0.15	11.5	0.0	2.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1571)
BofA	PF07441.11	gi|298674919|ref|YP_003726669.1|	-	6.9e-09	35.8	23.5	7.8e-09	35.6	23.5	1.0	1	0	0	1	1	1	1	SigmaK-factor	processing	regulatory	protein	BofA
HisKA_2	PF07568.12	gi|298674920|ref|YP_003726670.1|	-	1.8e-29	101.7	4.6	1.8e-29	101.7	4.6	2.5	2	0	0	2	2	2	1	Histidine	kinase
PAS_9	PF13426.7	gi|298674920|ref|YP_003726670.1|	-	5.2e-24	84.5	11.7	7.8e-11	42.2	0.0	4.4	5	1	0	5	5	5	3	PAS	domain
PAS_3	PF08447.12	gi|298674920|ref|YP_003726670.1|	-	4.7e-22	78.1	0.0	4.4e-17	62.2	0.0	3.8	3	0	0	3	3	3	2	PAS	fold
PAS	PF00989.25	gi|298674920|ref|YP_003726670.1|	-	1.9e-16	60.1	0.1	1.1e-05	25.4	0.0	4.3	3	2	0	3	3	3	2	PAS	fold
PAS_4	PF08448.10	gi|298674920|ref|YP_003726670.1|	-	7.3e-16	58.4	0.0	1.6e-05	25.1	0.0	3.8	3	1	0	3	3	3	2	PAS	fold
PAS_8	PF13188.7	gi|298674920|ref|YP_003726670.1|	-	1.9e-11	43.7	0.0	2.5e-05	24.2	0.0	2.6	2	0	0	2	2	2	2	PAS	domain
HATPase_c	PF02518.26	gi|298674920|ref|YP_003726670.1|	-	3.3e-11	43.7	0.4	1e-09	38.9	0.2	2.9	2	1	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HWE_HK	PF07536.14	gi|298674920|ref|YP_003726670.1|	-	1e-07	32.5	0.1	2.9e-07	31.1	0.1	1.9	1	0	0	1	1	1	1	HWE	histidine	kinase
PAS_11	PF14598.6	gi|298674920|ref|YP_003726670.1|	-	1.3e-07	31.8	0.2	0.32	11.1	0.0	3.8	3	0	0	3	3	3	2	PAS	domain
HATPase_c_2	PF13581.6	gi|298674920|ref|YP_003726670.1|	-	0.0019	18.2	0.0	0.0044	17.0	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
HATPase_c_3	PF13589.6	gi|298674920|ref|YP_003726670.1|	-	0.0045	16.8	0.1	0.0045	16.8	0.1	2.3	3	0	0	3	3	3	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_10	PF13596.6	gi|298674920|ref|YP_003726670.1|	-	0.06	13.9	5.3	0.14	12.8	0.0	3.7	3	3	0	3	3	3	0	PAS	domain
PAS_7	PF12860.7	gi|298674920|ref|YP_003726670.1|	-	0.1	12.7	3.0	15	5.8	0.2	3.8	2	2	1	3	3	3	0	PAS	fold
FdhE	PF04216.12	gi|298674920|ref|YP_003726670.1|	-	0.16	11.8	0.1	0.3	10.9	0.1	1.4	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
Cache_3-Cache_2	PF17201.4	gi|298674920|ref|YP_003726670.1|	-	0.53	9.5	7.0	1.5	8.0	0.1	2.4	1	1	1	2	2	2	0	Cache	3/Cache	2	fusion	domain
ACCA	PF03255.14	gi|298674920|ref|YP_003726670.1|	-	3.5	7.5	8.3	7.4	6.4	0.1	2.6	1	1	1	2	2	2	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
EMP24_GP25L	PF01105.24	gi|298674920|ref|YP_003726670.1|	-	5.6	6.9	10.6	3.8	7.4	4.0	3.3	3	1	1	4	4	4	0	emp24/gp25L/p24	family/GOLD
ECSIT_C	PF14784.6	gi|298674921|ref|YP_003726671.1|	-	0.0052	17.1	0.0	0.0059	16.9	0.0	1.1	1	0	0	1	1	1	1	C-terminal	domain	of	the	ECSIT	protein
RBD-FIP	PF09457.10	gi|298674921|ref|YP_003726671.1|	-	0.015	15.2	1.8	0.02	14.8	1.8	1.2	1	0	0	1	1	1	0	FIP	domain
bZIP_1	PF00170.21	gi|298674921|ref|YP_003726671.1|	-	0.045	13.8	3.0	0.056	13.5	3.0	1.1	1	0	0	1	1	1	0	bZIP	transcription	factor
Hormone_3	PF00159.18	gi|298674921|ref|YP_003726671.1|	-	0.078	13.1	0.8	0.18	11.9	0.1	1.9	3	0	0	3	3	3	0	Pancreatic	hormone	peptide
DUF2205	PF10224.9	gi|298674921|ref|YP_003726671.1|	-	0.18	11.8	2.6	0.32	11.0	2.6	1.6	1	1	0	1	1	1	0	Short	coiled-coil	protein
DUF737	PF05300.11	gi|298674921|ref|YP_003726671.1|	-	0.25	11.7	3.2	0.27	11.6	3.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF737)
DUF1699	PF08004.11	gi|298674922|ref|YP_003726672.1|	-	1.4e-57	193.0	1.5	1.5e-57	192.8	1.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1699)
ThiF	PF00899.21	gi|298674923|ref|YP_003726673.1|	-	2.4e-65	220.3	0.0	3e-65	220.0	0.0	1.0	1	0	0	1	1	1	1	ThiF	family
Sacchrp_dh_NADP	PF03435.18	gi|298674923|ref|YP_003726673.1|	-	0.0059	16.9	0.1	0.013	15.8	0.1	1.6	1	1	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
3HCDH_N	PF02737.18	gi|298674923|ref|YP_003726673.1|	-	0.029	14.2	0.0	0.041	13.8	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|298674923|ref|YP_003726673.1|	-	0.032	13.8	0.2	0.065	12.8	0.2	1.6	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|298674923|ref|YP_003726673.1|	-	0.063	13.3	0.1	0.2	11.7	0.0	1.8	1	1	1	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Trypsin_2	PF13365.6	gi|298674924|ref|YP_003726674.1|	-	9.8e-34	117.4	0.2	1.6e-33	116.7	0.2	1.3	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
PDZ_2	PF13180.6	gi|298674924|ref|YP_003726674.1|	-	6.4e-18	64.9	0.1	1.6e-17	63.6	0.1	1.7	1	0	0	1	1	1	1	PDZ	domain
Trypsin	PF00089.26	gi|298674924|ref|YP_003726674.1|	-	2.4e-12	47.2	0.0	5.7e-12	45.9	0.0	1.6	1	1	0	1	1	1	1	Trypsin
PDZ_6	PF17820.1	gi|298674924|ref|YP_003726674.1|	-	6.9e-08	32.2	1.8	6.1e-05	22.8	0.3	2.5	1	1	1	2	2	2	2	PDZ	domain
PDZ	PF00595.24	gi|298674924|ref|YP_003726674.1|	-	4.2e-06	27.0	0.4	0.0029	17.9	0.0	3.1	2	0	0	2	2	2	2	PDZ	domain
GRASP55_65	PF04495.14	gi|298674924|ref|YP_003726674.1|	-	8e-05	23.0	1.1	0.00096	19.5	0.1	2.8	2	1	0	2	2	2	1	GRASP55/65	PDZ-like	domain
DUF316	PF03761.15	gi|298674924|ref|YP_003726674.1|	-	0.012	15.2	0.1	0.027	14.0	0.2	1.5	2	0	0	2	2	2	0	Chymotrypsin	family	Peptidase-S1
Peptidase_S32	PF05579.13	gi|298674924|ref|YP_003726674.1|	-	0.051	12.8	0.2	4	6.5	0.0	2.2	2	0	0	2	2	2	0	Equine	arteritis	virus	serine	endopeptidase	S32
CPSF_A	PF03178.15	gi|298674924|ref|YP_003726674.1|	-	0.062	12.6	0.0	0.12	11.7	0.0	1.4	1	0	0	1	1	1	0	CPSF	A	subunit	region
Thioredoxin_3	PF13192.6	gi|298674925|ref|YP_003726675.1|	-	1.7e-21	76.0	1.8	1.8e-21	75.9	1.8	1.0	1	0	0	1	1	1	1	Thioredoxin	domain
DUF836	PF05768.14	gi|298674925|ref|YP_003726675.1|	-	0.0017	18.7	0.1	0.0018	18.7	0.1	1.1	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
T2SSE	PF00437.20	gi|298674925|ref|YP_003726675.1|	-	0.0021	17.1	0.0	0.0021	17.1	0.0	1.0	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Thioredoxin_4	PF13462.6	gi|298674925|ref|YP_003726675.1|	-	0.0048	17.1	0.3	2.9	8.0	0.1	2.0	1	1	1	2	2	2	2	Thioredoxin
ArsD	PF06953.11	gi|298674925|ref|YP_003726675.1|	-	0.0078	16.6	0.0	0.013	15.8	0.0	1.4	1	1	0	1	1	1	1	Arsenical	resistance	operon	trans-acting	repressor	ArsD
Thioredoxin_2	PF13098.6	gi|298674925|ref|YP_003726675.1|	-	0.046	14.2	0.1	0.15	12.5	0.1	1.7	1	1	0	1	1	1	0	Thioredoxin-like	domain
Glutaredoxin	PF00462.24	gi|298674925|ref|YP_003726675.1|	-	0.066	13.4	0.1	0.16	12.2	0.1	1.6	1	1	0	1	1	1	0	Glutaredoxin
BON	PF04972.17	gi|298674925|ref|YP_003726675.1|	-	0.082	13.2	0.0	1	9.7	0.0	2.0	2	0	0	2	2	2	0	BON	domain
Fer4_5	PF12801.7	gi|298674926|ref|YP_003726676.1|	-	9.7e-14	51.1	19.0	1e-11	44.6	0.9	3.9	4	1	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298674926|ref|YP_003726676.1|	-	1.8e-08	34.4	16.2	5.9e-06	26.3	15.6	3.0	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298674926|ref|YP_003726676.1|	-	2.4e-08	34.4	14.6	0.00023	21.7	2.5	3.2	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298674926|ref|YP_003726676.1|	-	1.4e-07	31.0	24.8	5.4e-05	22.8	5.5	3.4	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|298674926|ref|YP_003726676.1|	-	2.9e-07	31.3	10.1	0.0013	19.6	2.6	3.3	3	0	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|298674926|ref|YP_003726676.1|	-	9.6e-07	28.8	21.6	3e-05	24.0	17.7	3.2	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298674926|ref|YP_003726676.1|	-	2.7e-06	27.4	16.5	0.00038	20.5	2.7	2.6	2	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298674926|ref|YP_003726676.1|	-	1.8e-05	24.9	11.0	3.4e-05	24.0	10.5	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298674926|ref|YP_003726676.1|	-	2.8e-05	24.0	21.1	0.0011	18.9	5.0	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|298674926|ref|YP_003726676.1|	-	0.0002	21.3	12.3	0.00063	19.7	1.9	3.1	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298674926|ref|YP_003726676.1|	-	0.00026	21.5	20.2	0.03	14.9	6.7	3.1	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298674926|ref|YP_003726676.1|	-	0.0038	18.1	5.2	0.0038	18.1	5.2	3.7	4	0	0	4	4	3	1	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|298674926|ref|YP_003726676.1|	-	0.0073	16.8	18.4	0.0094	16.5	2.4	2.7	2	1	1	3	3	3	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|298674926|ref|YP_003726676.1|	-	0.008	16.6	22.5	0.023	15.2	2.5	3.3	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298674926|ref|YP_003726676.1|	-	0.062	13.8	20.0	0.19	12.2	3.8	2.6	2	1	2	4	4	3	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298674926|ref|YP_003726676.1|	-	0.075	13.9	10.8	1.3	9.9	2.0	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
DUF4407	PF14362.6	gi|298674926|ref|YP_003726676.1|	-	0.59	9.4	3.5	1.2	8.4	3.5	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
CitMHS	PF03600.16	gi|298674926|ref|YP_003726676.1|	-	1.4	8.1	7.4	1.6	7.8	7.4	1.1	1	0	0	1	1	1	0	Citrate	transporter
ETF_QO	PF05187.13	gi|298674926|ref|YP_003726676.1|	-	2.7	8.2	8.9	0.2	11.8	1.2	2.2	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Fer4_15	PF13459.6	gi|298674926|ref|YP_003726676.1|	-	6.2	7.6	13.0	4.6	8.1	2.8	2.3	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
MarR_2	PF12802.7	gi|298674927|ref|YP_003726677.1|	-	4.9e-05	23.1	0.0	6.9e-05	22.7	0.0	1.2	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.19	gi|298674927|ref|YP_003726677.1|	-	5e-05	23.4	0.3	0.00012	22.2	0.0	1.8	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TrmB	PF01978.19	gi|298674927|ref|YP_003726677.1|	-	7.2e-05	22.6	0.1	0.0001	22.1	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_micro	PF17007.5	gi|298674927|ref|YP_003726677.1|	-	0.00079	18.4	0.7	0.00083	18.3	0.7	1.1	1	0	0	1	1	1	1	HTH-like
HTH_24	PF13412.6	gi|298674927|ref|YP_003726677.1|	-	0.00096	18.7	0.0	0.0015	18.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|298674927|ref|YP_003726677.1|	-	0.0028	17.5	0.1	0.0063	16.4	0.1	1.6	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|298674927|ref|YP_003726677.1|	-	0.0032	17.4	0.1	0.0054	16.6	0.1	1.5	1	1	0	1	1	1	1	HTH	domain
TFIIE_alpha	PF02002.17	gi|298674927|ref|YP_003726677.1|	-	0.005	16.7	2.2	0.0076	16.1	2.1	1.3	1	1	0	1	1	1	1	TFIIE	alpha	subunit
HTH_36	PF13730.6	gi|298674927|ref|YP_003726677.1|	-	0.0058	16.6	0.0	0.012	15.5	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_41	PF14502.6	gi|298674927|ref|YP_003726677.1|	-	0.017	14.8	0.1	0.049	13.3	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
Trans_reg_C	PF00486.28	gi|298674927|ref|YP_003726677.1|	-	0.019	15.1	0.2	0.053	13.6	0.1	1.9	1	1	1	2	2	2	0	Transcriptional	regulatory	protein,	C	terminal
Stealth_CR1	PF17101.5	gi|298674927|ref|YP_003726677.1|	-	0.019	14.7	2.3	0.037	13.8	2.3	1.5	1	0	0	1	1	1	0	Stealth	protein	CR1,	conserved	region	1
Penicillinase_R	PF03965.16	gi|298674927|ref|YP_003726677.1|	-	0.02	15.3	0.2	0.025	14.9	0.2	1.3	1	0	0	1	1	1	0	Penicillinase	repressor
Rio2_N	PF09202.11	gi|298674927|ref|YP_003726677.1|	-	0.022	15.0	0.1	0.029	14.6	0.1	1.3	1	0	0	1	1	1	0	Rio2,	N-terminal
HTH_27	PF13463.6	gi|298674927|ref|YP_003726677.1|	-	0.031	14.8	0.1	0.059	13.9	0.1	1.5	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
TFIIE_beta	PF02186.15	gi|298674927|ref|YP_003726677.1|	-	0.035	14.4	0.1	0.054	13.8	0.1	1.3	1	0	0	1	1	1	0	TFIIE	beta	subunit	core	domain
Rrf2	PF02082.20	gi|298674927|ref|YP_003726677.1|	-	0.043	14.2	0.0	0.066	13.6	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
Dimerisation	PF08100.11	gi|298674927|ref|YP_003726677.1|	-	0.067	13.2	0.0	0.19	11.7	0.0	1.8	1	1	0	1	1	1	0	Dimerisation	domain
GntR	PF00392.21	gi|298674927|ref|YP_003726677.1|	-	0.099	12.3	0.1	0.3	10.8	0.1	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
MFS_1	PF07690.16	gi|298674928|ref|YP_003726678.1|	-	3.8e-44	151.1	38.1	3.8e-44	151.1	38.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|298674928|ref|YP_003726678.1|	-	2e-10	39.7	16.3	2.3e-10	39.5	16.3	1.0	1	0	0	1	1	1	1	Transmembrane	secretion	effector
PAP2_3	PF14378.6	gi|298674929|ref|YP_003726679.1|	-	2.1e-13	50.4	16.4	2.1e-13	50.4	16.4	2.3	2	1	0	2	2	2	1	PAP2	superfamily
PAP2	PF01569.21	gi|298674929|ref|YP_003726679.1|	-	9.8e-09	35.1	2.8	9.8e-09	35.1	2.8	2.8	2	1	1	3	3	3	1	PAP2	superfamily
PAP2_C	PF14360.6	gi|298674929|ref|YP_003726679.1|	-	0.015	15.8	4.1	0.015	15.8	4.1	3.4	4	0	0	4	4	4	0	PAP2	superfamily	C-terminal
FixQ	PF05545.11	gi|298674929|ref|YP_003726679.1|	-	1.3	9.1	0.0	1.3	9.1	0.0	4.1	4	0	0	4	4	4	0	Cbb3-type	cytochrome	oxidase	component	FixQ
Radical_SAM	PF04055.21	gi|298674930|ref|YP_003726680.1|	-	3.7e-08	33.9	0.0	8.4e-08	32.8	0.0	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
DUF5069	PF16798.5	gi|298674930|ref|YP_003726680.1|	-	0.19	11.9	0.0	0.47	10.7	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5069)
Peptidase_M54	PF07998.11	gi|298674931|ref|YP_003726681.1|	-	6.1e-27	94.9	0.1	7.1e-27	94.7	0.1	1.1	1	0	0	1	1	1	1	Peptidase	family	M54
Peptidase_M10	PF00413.24	gi|298674931|ref|YP_003726681.1|	-	0.00058	19.7	0.1	0.00085	19.2	0.1	1.4	1	1	0	1	1	1	1	Matrixin
Reprolysin_4	PF13583.6	gi|298674931|ref|YP_003726681.1|	-	0.005	16.5	0.1	0.009	15.7	0.1	1.4	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Zincin_1	PF06262.11	gi|298674931|ref|YP_003726681.1|	-	0.031	14.4	0.0	1.4	9.1	0.0	2.4	2	0	0	2	2	2	0	Zincin-like	metallopeptidase
Reprolysin_3	PF13582.6	gi|298674931|ref|YP_003726681.1|	-	0.055	14.0	0.2	0.065	13.8	0.2	1.4	1	1	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Metallopep	PF12044.8	gi|298674931|ref|YP_003726681.1|	-	0.074	11.6	0.2	0.1	11.2	0.2	1.1	1	0	0	1	1	1	0	Putative	peptidase	family
Peptidase_M43	PF05572.13	gi|298674931|ref|YP_003726681.1|	-	0.1	12.5	0.1	0.15	12.0	0.1	1.3	1	0	0	1	1	1	0	Pregnancy-associated	plasma	protein-A
Reprolysin_5	PF13688.6	gi|298674931|ref|YP_003726681.1|	-	0.11	12.7	0.0	0.11	12.6	0.0	1.2	1	0	0	1	1	1	0	Metallo-peptidase	family	M12
DUF4953	PF16313.5	gi|298674931|ref|YP_003726681.1|	-	0.21	10.8	0.0	0.37	10.0	0.0	1.3	1	0	0	1	1	1	0	Met-zincin
DUF1641	PF07849.11	gi|298674932|ref|YP_003726682.1|	-	9.7e-14	51.0	4.6	1.2e-13	50.7	2.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1641)
Pyr_redox_2	PF07992.14	gi|298674933|ref|YP_003726683.1|	-	1.9e-20	73.3	0.0	1.9e-19	70.0	0.0	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|298674933|ref|YP_003726683.1|	-	0.0012	18.5	0.0	0.068	12.8	0.0	2.3	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.27	gi|298674933|ref|YP_003726683.1|	-	0.0021	18.6	0.0	2.7	8.6	0.0	2.4	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Sacchrp_dh_NADP	PF03435.18	gi|298674933|ref|YP_003726683.1|	-	0.017	15.3	0.0	0.037	14.3	0.0	1.5	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_9	PF13454.6	gi|298674933|ref|YP_003726683.1|	-	0.019	14.9	0.0	2.3	8.2	0.0	2.3	2	0	0	2	2	2	0	FAD-NAD(P)-binding
NAD_binding_8	PF13450.6	gi|298674933|ref|YP_003726683.1|	-	0.057	13.7	0.0	0.14	12.4	0.0	1.6	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
ORF6C	PF10552.9	gi|298674934|ref|YP_003726684.1|	-	0.27	11.3	3.9	1.6	8.8	3.9	2.5	1	1	0	1	1	1	0	ORF6C	domain
DUF5100	PF17029.5	gi|298674934|ref|YP_003726684.1|	-	0.46	10.3	6.2	0.098	12.5	2.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5100)
HSBP1	PF06825.12	gi|298674934|ref|YP_003726684.1|	-	2.6	8.0	9.1	4.1	7.3	2.5	3.0	3	1	1	4	4	4	0	Heat	shock	factor	binding	protein	1
baeRF_family10	PF18854.1	gi|298674935|ref|YP_003726685.1|	-	3.7e-25	88.8	0.0	5.7e-25	88.2	0.0	1.2	1	0	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	10
eRF1_2	PF03464.15	gi|298674935|ref|YP_003726685.1|	-	4.9e-21	75.4	0.1	2.5e-20	73.2	0.0	2.1	3	0	0	3	3	3	1	eRF1	domain	2
acVLRF1	PF18859.1	gi|298674935|ref|YP_003726685.1|	-	1.1e-13	51.5	0.0	1.7e-13	51.0	0.0	1.2	1	0	0	1	1	1	1	Actinobacteria/chloroflexi	VLRF1	release	factor
eRF1_3	PF03465.15	gi|298674935|ref|YP_003726685.1|	-	3.4e-09	37.2	0.0	9.1e-09	35.8	0.0	1.7	1	0	0	1	1	1	1	eRF1	domain	3
baeRF_family2	PF18844.1	gi|298674935|ref|YP_003726685.1|	-	4.3e-08	33.3	0.0	5.9e-08	32.9	0.0	1.2	1	0	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	2
baeRF_family12	PF18856.1	gi|298674935|ref|YP_003726685.1|	-	9.3e-06	26.3	0.0	2.4e-05	24.9	0.0	1.8	1	1	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	12
Host_attach	PF10116.9	gi|298674935|ref|YP_003726685.1|	-	0.002	18.7	0.0	0.0037	17.8	0.0	1.4	1	0	0	1	1	1	1	Protein	required	for	attachment	to	host	cells
baeRF_family5	PF18846.1	gi|298674935|ref|YP_003726685.1|	-	0.0044	17.2	0.1	0.022	14.9	0.1	2.1	1	1	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	5
baeRF_family3	PF18845.1	gi|298674935|ref|YP_003726685.1|	-	0.011	16.0	0.0	0.019	15.2	0.0	1.4	1	0	0	1	1	1	0	Bacterial	archaeo-eukaryotic	release	factor	family	3
zf-Di19	PF05605.12	gi|298674935|ref|YP_003726685.1|	-	0.062	13.6	0.2	0.14	12.5	0.2	1.5	1	0	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
Aminotran_1_2	PF00155.21	gi|298674936|ref|YP_003726686.1|	-	3.6e-47	161.3	0.0	5.2e-47	160.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
zf-like	PF04071.12	gi|298674936|ref|YP_003726686.1|	-	4.2e-28	97.1	7.4	9.7e-28	95.9	7.4	1.6	1	0	0	1	1	1	1	Cysteine-rich	small	domain
Aminotran_5	PF00266.19	gi|298674936|ref|YP_003726686.1|	-	0.0085	15.1	0.0	1	8.2	0.0	3.2	2	2	1	3	3	3	1	Aminotransferase	class-V
Prefoldin_2	PF01920.20	gi|298674936|ref|YP_003726686.1|	-	0.14	12.1	0.0	0.32	11.0	0.0	1.5	1	0	0	1	1	1	0	Prefoldin	subunit
DegT_DnrJ_EryC1	PF01041.17	gi|298674936|ref|YP_003726686.1|	-	0.18	11.1	0.0	0.39	10.0	0.0	1.5	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
MFS_1	PF07690.16	gi|298674937|ref|YP_003726687.1|	-	3.4e-47	161.1	47.1	3.4e-47	161.1	47.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|298674937|ref|YP_003726687.1|	-	2.6e-14	52.5	22.4	3.5e-14	52.1	22.4	1.1	1	0	0	1	1	1	1	Transmembrane	secretion	effector
Sugar_tr	PF00083.24	gi|298674937|ref|YP_003726687.1|	-	0.00032	19.7	9.7	0.00032	19.7	9.7	2.9	1	1	1	3	3	3	2	Sugar	(and	other)	transporter
PMP1_2	PF08114.11	gi|298674937|ref|YP_003726687.1|	-	0.13	12.0	0.3	0.13	12.0	0.3	3.5	3	1	0	3	3	3	0	ATPase	proteolipid	family
OrfB_IS605	PF01385.19	gi|298674938|ref|YP_003726688.1|	-	3.1e-26	92.0	1.6	7.1e-26	90.8	1.6	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674938|ref|YP_003726688.1|	-	8.9e-23	80.0	0.3	1.9e-22	79.0	0.3	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298674938|ref|YP_003726688.1|	-	4.2e-20	71.0	1.4	9.3e-20	69.8	1.4	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298674938|ref|YP_003726688.1|	-	0.013	15.7	0.2	0.034	14.3	0.2	1.7	1	0	0	1	1	1	0	Piccolo	Zn-finger
Phage_GP20	PF06810.11	gi|298674938|ref|YP_003726688.1|	-	0.022	14.5	5.1	0.48	10.2	2.4	2.4	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
LemA	PF04011.12	gi|298674938|ref|YP_003726688.1|	-	0.073	12.9	2.0	0.52	10.2	0.3	2.4	2	0	0	2	2	2	0	LemA	family
HypA	PF01155.19	gi|298674938|ref|YP_003726688.1|	-	0.24	11.5	0.6	0.64	10.1	0.4	1.8	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
MapZ_EC1	PF18041.1	gi|298674938|ref|YP_003726688.1|	-	0.79	10.0	6.6	0.3	11.4	1.3	2.3	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
DASH_Spc34	PF08657.10	gi|298674938|ref|YP_003726688.1|	-	1.2	8.9	7.2	0.083	12.7	1.5	1.9	3	0	0	3	3	3	0	DASH	complex	subunit	Spc34
DUF98	PF01947.16	gi|298674939|ref|YP_003726689.1|	-	8.9e-24	84.1	0.0	1.1e-23	83.8	0.0	1.0	1	0	0	1	1	1	1	p-hydroxybenzoic	acid	synthase
Chor_lyase	PF04345.13	gi|298674939|ref|YP_003726689.1|	-	0.0019	17.9	0.0	0.0021	17.7	0.0	1.1	1	0	0	1	1	1	1	Chorismate	lyase
UTRA	PF07702.13	gi|298674939|ref|YP_003726689.1|	-	0.004	17.0	0.0	0.0055	16.6	0.0	1.3	1	0	0	1	1	1	1	UTRA	domain
DUF5611	PF18446.1	gi|298674940|ref|YP_003726690.1|	-	1.1e-35	122.6	1.0	1.2e-35	122.4	1.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5611)
Imm6	PF14434.6	gi|298674940|ref|YP_003726690.1|	-	0.041	13.8	0.2	0.082	12.8	0.2	1.6	1	1	0	1	1	1	0	Immunity	protein	Imm6
UCR_Fe-S_N	PF10399.9	gi|298674940|ref|YP_003726690.1|	-	0.27	10.6	0.1	0.41	10.0	0.1	1.2	1	0	0	1	1	1	0	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
Flavodoxin_1	PF00258.25	gi|298674941|ref|YP_003726691.1|	-	8.9e-14	51.9	0.0	1.3e-13	51.4	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin
Flavodoxin_5	PF12724.7	gi|298674941|ref|YP_003726691.1|	-	1.2e-10	41.8	0.0	1.4e-10	41.6	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin	domain
FMN_red	PF03358.15	gi|298674941|ref|YP_003726691.1|	-	6e-06	26.1	0.4	0.0015	18.3	0.1	2.1	1	1	1	2	2	2	2	NADPH-dependent	FMN	reductase
Flavodoxin_3	PF12641.7	gi|298674941|ref|YP_003726691.1|	-	8.1e-05	22.4	0.0	0.00011	21.9	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin	domain
Peptidase_U40	PF10464.9	gi|298674941|ref|YP_003726691.1|	-	0.0063	16.2	0.0	0.0081	15.9	0.0	1.1	1	0	0	1	1	1	1	Peptidase	U40
Flavodoxin_2	PF02525.17	gi|298674941|ref|YP_003726691.1|	-	0.14	11.8	0.0	0.46	10.2	0.0	1.9	1	1	0	1	1	1	0	Flavodoxin-like	fold
HisKA_2	PF07568.12	gi|298674942|ref|YP_003726692.1|	-	3e-31	107.3	2.5	5.4e-31	106.5	0.7	2.4	2	0	0	2	2	2	1	Histidine	kinase
dCache_1	PF02743.18	gi|298674942|ref|YP_003726692.1|	-	1.2e-28	100.5	4.6	1.2e-28	100.5	4.6	2.4	2	1	0	2	2	2	1	Cache	domain
HATPase_c	PF02518.26	gi|298674942|ref|YP_003726692.1|	-	2e-10	41.1	2.1	3.8e-10	40.3	0.5	2.4	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HWE_HK	PF07536.14	gi|298674942|ref|YP_003726692.1|	-	3.9e-06	27.5	0.1	1.2e-05	26.0	0.1	1.8	1	0	0	1	1	1	1	HWE	histidine	kinase
HAMP	PF00672.25	gi|298674942|ref|YP_003726692.1|	-	0.001	19.4	0.0	0.023	15.1	0.0	2.8	2	0	0	2	2	2	1	HAMP	domain
HATPase_c_2	PF13581.6	gi|298674942|ref|YP_003726692.1|	-	0.0025	17.7	0.0	0.0056	16.6	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
dCache_2	PF08269.11	gi|298674942|ref|YP_003726692.1|	-	0.0047	16.2	0.0	0.0047	16.2	0.0	3.1	3	1	0	3	3	3	1	Cache	domain
sCache_2	PF17200.4	gi|298674942|ref|YP_003726692.1|	-	0.0053	16.6	0.7	0.017	15.0	0.0	2.1	2	0	0	2	2	2	1	Single	Cache	domain	2
HATPase_c_3	PF13589.6	gi|298674942|ref|YP_003726692.1|	-	0.014	15.3	0.4	0.042	13.7	0.4	1.8	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Phage_coat	PF09063.10	gi|298674942|ref|YP_003726692.1|	-	0.064	13.3	0.0	0.52	10.3	0.0	2.3	1	1	0	1	1	1	0	Phage	PP7	coat	protein
CREPT	PF16566.5	gi|298674942|ref|YP_003726692.1|	-	0.52	10.5	4.2	0.29	11.3	1.1	2.1	2	0	0	2	2	2	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
Response_reg	PF00072.24	gi|298674943|ref|YP_003726693.1|	-	2.8e-22	79.0	0.2	3.3e-22	78.8	0.2	1.1	1	0	0	1	1	1	1	Response	regulator	receiver	domain
TrkA_N	PF02254.18	gi|298674943|ref|YP_003726693.1|	-	0.021	15.1	0.5	0.04	14.2	0.5	1.4	1	1	0	1	1	1	0	TrkA-N	domain
HisKA_2	PF07568.12	gi|298674944|ref|YP_003726694.1|	-	8.1e-32	109.2	3.2	8.1e-32	109.2	3.2	2.2	2	0	0	2	2	2	1	Histidine	kinase
PAS_3	PF08447.12	gi|298674944|ref|YP_003726694.1|	-	1.1e-25	89.8	0.5	2e-19	69.6	0.4	2.4	2	0	0	2	2	2	2	PAS	fold
PAS_9	PF13426.7	gi|298674944|ref|YP_003726694.1|	-	3.2e-17	62.7	1.7	3.8e-11	43.2	0.3	2.5	2	0	0	2	2	2	2	PAS	domain
PAS_4	PF08448.10	gi|298674944|ref|YP_003726694.1|	-	5.6e-15	55.5	0.0	5.7e-09	36.2	0.0	2.2	2	0	0	2	2	2	2	PAS	fold
PAS	PF00989.25	gi|298674944|ref|YP_003726694.1|	-	1.8e-14	53.7	0.1	3.3e-09	36.8	0.0	2.5	2	0	0	2	2	2	2	PAS	fold
PAS_8	PF13188.7	gi|298674944|ref|YP_003726694.1|	-	5.6e-10	39.0	0.0	6e-09	35.7	0.0	2.5	2	0	0	2	2	2	1	PAS	domain
HATPase_c	PF02518.26	gi|298674944|ref|YP_003726694.1|	-	1.2e-08	35.4	0.1	4e-08	33.7	0.1	1.9	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HWE_HK	PF07536.14	gi|298674944|ref|YP_003726694.1|	-	4.7e-07	30.4	0.5	1.1e-06	29.2	0.5	1.7	1	0	0	1	1	1	1	HWE	histidine	kinase
HATPase_c_2	PF13581.6	gi|298674944|ref|YP_003726694.1|	-	0.0012	18.8	0.0	0.0022	18.0	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
PAS_11	PF14598.6	gi|298674944|ref|YP_003726694.1|	-	0.0013	18.9	0.2	1.9	8.6	0.0	2.8	2	0	0	2	2	2	2	PAS	domain
HATPase_c_3	PF13589.6	gi|298674944|ref|YP_003726694.1|	-	0.0039	17.0	0.0	0.011	15.6	0.0	1.7	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Stomoxyn	PF11585.8	gi|298674944|ref|YP_003726694.1|	-	0.087	12.9	0.0	0.24	11.4	0.0	1.7	1	0	0	1	1	1	0	Insect	antimicrobial	peptide,	stomoxyn
PAS_7	PF12860.7	gi|298674944|ref|YP_003726694.1|	-	0.13	12.5	1.8	1.6	8.9	0.1	2.9	3	0	0	3	3	3	0	PAS	fold
VanY	PF02557.17	gi|298674944|ref|YP_003726694.1|	-	0.13	12.1	0.1	0.25	11.1	0.1	1.4	1	0	0	1	1	1	0	D-alanyl-D-alanine	carboxypeptidase
Response_reg	PF00072.24	gi|298674945|ref|YP_003726695.1|	-	2.9e-23	82.2	0.2	3.3e-23	82.0	0.2	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Enolase_C	PF00113.22	gi|298674946|ref|YP_003726696.1|	-	1.3e-114	382.5	0.2	1.7e-114	382.1	0.2	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.16	gi|298674946|ref|YP_003726696.1|	-	8.9e-57	190.9	0.1	1.5e-56	190.2	0.1	1.4	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE_C	PF13378.6	gi|298674946|ref|YP_003726696.1|	-	1.4e-07	31.3	0.0	2.2e-07	30.7	0.0	1.2	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MAAL_C	PF07476.11	gi|298674946|ref|YP_003726696.1|	-	0.025	13.7	0.0	0.065	12.4	0.0	1.6	2	0	0	2	2	2	0	Methylaspartate	ammonia-lyase	C-terminus
DJ-1_PfpI	PF01965.24	gi|298674947|ref|YP_003726697.1|	-	1.4e-56	190.8	0.0	1.6e-56	190.6	0.0	1.0	1	0	0	1	1	1	1	DJ-1/PfpI	family
ThiJ_like	PF17124.5	gi|298674947|ref|YP_003726697.1|	-	1e-05	25.3	0.0	0.01	15.5	0.0	2.2	1	1	0	2	2	2	2	ThiJ/PfpI	family-like
GATase	PF00117.28	gi|298674947|ref|YP_003726697.1|	-	0.00068	19.5	0.0	0.0009	19.1	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.14	gi|298674947|ref|YP_003726697.1|	-	0.016	14.8	0.0	0.017	14.7	0.0	1.3	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_C26	PF07722.13	gi|298674947|ref|YP_003726697.1|	-	0.1	12.3	0.0	0.3	10.8	0.0	1.8	1	1	1	2	2	2	0	Peptidase	C26
GATase_5	PF13507.6	gi|298674947|ref|YP_003726697.1|	-	0.12	11.4	0.0	0.13	11.3	0.0	1.3	1	1	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
DUF296	PF03479.15	gi|298674948|ref|YP_003726698.1|	-	1.4e-14	54.3	0.0	1.7e-14	54.1	0.0	1.1	1	0	0	1	1	1	1	Plants	and	Prokaryotes	Conserved	(PCC)	domain
AA_permease_2	PF13520.6	gi|298674949|ref|YP_003726699.1|	-	1.5e-43	149.2	58.9	2.6e-43	148.5	58.9	1.4	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.21	gi|298674949|ref|YP_003726699.1|	-	4.1e-28	98.2	60.3	1.6e-27	96.3	60.4	1.8	1	1	0	1	1	1	1	Amino	acid	permease
Spore_permease	PF03845.13	gi|298674949|ref|YP_003726699.1|	-	3.8e-09	35.8	25.2	3.8e-09	35.8	25.2	2.2	1	1	0	2	2	2	1	Spore	germination	protein
Tubulin	PF00091.25	gi|298674950|ref|YP_003726700.1|	-	5.2e-34	118.2	0.1	1.6e-33	116.6	0.0	1.8	2	0	0	2	2	2	1	Tubulin/FtsZ	family,	GTPase	domain
Tubulin_2	PF13809.6	gi|298674950|ref|YP_003726700.1|	-	0.00076	18.8	0.0	0.0029	16.9	0.0	2.0	1	1	0	1	1	1	1	Tubulin	like
PglD_N	PF17836.1	gi|298674950|ref|YP_003726700.1|	-	0.12	13.1	3.0	1	10.0	0.3	2.7	2	1	0	2	2	2	0	PglD	N-terminal	domain
DUF11	PF01345.18	gi|298674951|ref|YP_003726701.1|	-	3.5e-09	36.9	0.0	0.0023	18.2	0.0	2.6	1	1	1	2	2	2	2	Domain	of	unknown	function	DUF11
BatD	PF13584.6	gi|298674951|ref|YP_003726701.1|	-	1.1e-08	34.3	2.6	2.4e-07	29.9	2.2	2.2	2	0	0	2	2	2	1	Oxygen	tolerance
TRAP_beta	PF05753.14	gi|298674951|ref|YP_003726701.1|	-	3.1e-08	33.2	4.1	7.1e-05	22.3	0.9	2.4	1	1	1	2	2	2	2	Translocon-associated	protein	beta	(TRAPB)
CARDB	PF07705.11	gi|298674951|ref|YP_003726701.1|	-	9.3e-07	29.1	6.6	0.0097	16.1	1.1	2.6	2	0	0	2	2	2	2	CARDB
NPCBM_assoc	PF10633.9	gi|298674951|ref|YP_003726701.1|	-	5.4e-05	23.4	0.1	0.0055	16.9	0.0	2.9	3	0	0	3	3	3	1	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
A2M_BRD	PF07703.14	gi|298674951|ref|YP_003726701.1|	-	0.0039	17.5	1.4	0.011	16.1	0.8	2.1	2	0	0	2	2	2	1	Alpha-2-macroglobulin	bait	region	domain
DUF974	PF06159.13	gi|298674951|ref|YP_003726701.1|	-	0.044	13.6	0.0	0.26	11.1	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF974)
Calycin_like	PF13944.6	gi|298674951|ref|YP_003726701.1|	-	0.45	10.8	15.3	7.4	6.9	1.4	3.6	3	1	0	3	3	3	0	Calycin-like	beta-barrel	domain
BsuPI	PF12690.7	gi|298674951|ref|YP_003726701.1|	-	0.45	10.6	4.4	0.55	10.3	0.3	3.1	3	1	0	3	3	3	0	Intracellular	proteinase	inhibitor
DUF3244	PF11589.8	gi|298674951|ref|YP_003726701.1|	-	3.7	7.7	8.4	5.1	7.2	0.3	3.7	2	2	1	3	3	3	0	Domain	of	unknown	function	(DUF3244)
QRPTase_C	PF01729.19	gi|298674952|ref|YP_003726702.1|	-	1.1e-56	191.2	1.9	1.4e-56	190.9	1.9	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.16	gi|298674952|ref|YP_003726702.1|	-	8.5e-19	67.4	0.0	1.7e-18	66.4	0.0	1.5	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Ribul_P_3_epim	PF00834.19	gi|298674952|ref|YP_003726702.1|	-	0.0048	16.3	0.1	0.011	15.1	0.1	1.6	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
TMP-TENI	PF02581.17	gi|298674952|ref|YP_003726702.1|	-	0.0059	15.9	0.3	0.0097	15.3	0.3	1.4	1	0	0	1	1	1	1	Thiamine	monophosphate	synthase
Radical_SAM	PF04055.21	gi|298674952|ref|YP_003726702.1|	-	0.099	13.0	0.3	0.15	12.5	0.3	1.4	1	1	0	1	1	1	0	Radical	SAM	superfamily
DUF108	PF01958.18	gi|298674953|ref|YP_003726703.1|	-	2.8e-36	123.8	0.9	5.9e-36	122.7	0.9	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF108
NAD_binding_3	PF03447.16	gi|298674953|ref|YP_003726703.1|	-	2.9e-25	89.2	0.2	5.2e-25	88.4	0.2	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.20	gi|298674953|ref|YP_003726703.1|	-	2.8e-08	33.9	0.3	5.4e-08	33.0	0.3	1.4	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
GFO_IDH_MocA	PF01408.22	gi|298674953|ref|YP_003726703.1|	-	1e-06	29.5	0.0	2e-06	28.6	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Semialdhyde_dh	PF01118.24	gi|298674953|ref|YP_003726703.1|	-	9.1e-05	22.9	0.3	0.00032	21.1	0.3	1.8	1	1	1	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|298674953|ref|YP_003726703.1|	-	0.0005	20.6	0.1	0.0013	19.3	0.1	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Sacchrp_dh_NADP	PF03435.18	gi|298674953|ref|YP_003726703.1|	-	0.0011	19.3	0.9	0.0034	17.6	0.9	1.8	1	1	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
Shikimate_DH	PF01488.20	gi|298674953|ref|YP_003726703.1|	-	0.0016	18.5	0.2	0.0028	17.7	0.2	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|298674953|ref|YP_003726703.1|	-	0.0022	17.4	0.0	0.0037	16.6	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.15	gi|298674953|ref|YP_003726703.1|	-	0.017	15.3	0.1	0.029	14.5	0.1	1.4	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
TrkA_N	PF02254.18	gi|298674953|ref|YP_003726703.1|	-	0.087	13.1	0.6	0.19	12.0	0.1	1.9	2	1	0	2	2	2	0	TrkA-N	domain
Gp_dh_N	PF00044.24	gi|298674953|ref|YP_003726703.1|	-	0.14	12.6	0.1	0.52	10.7	0.1	2.1	2	1	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
NadA	PF02445.16	gi|298674954|ref|YP_003726704.1|	-	5.6e-124	413.2	4.9	6.3e-124	413.0	4.9	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
NTP_transf_4	PF13562.6	gi|298674954|ref|YP_003726704.1|	-	0.06	13.6	0.2	1.2	9.3	0.0	2.3	1	1	1	2	2	2	0	Sugar	nucleotidyl	transferase
Sigma70_r4	PF04545.16	gi|298674954|ref|YP_003726704.1|	-	0.18	11.4	0.0	1.3	8.6	0.0	2.1	2	0	0	2	2	2	0	Sigma-70,	region	4
UbiA	PF01040.18	gi|298674955|ref|YP_003726705.1|	-	1e-38	133.1	20.2	2.5e-38	131.8	20.0	1.6	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
AdoMet_Synthase	PF01941.19	gi|298674956|ref|YP_003726706.1|	-	1.9e-161	537.3	0.3	2.2e-161	537.1	0.3	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
SWIRM	PF04433.17	gi|298674956|ref|YP_003726706.1|	-	0.059	13.7	0.2	0.24	11.7	0.2	2.1	2	0	0	2	2	2	0	SWIRM	domain
PIN_5	PF08745.11	gi|298674957|ref|YP_003726707.1|	-	1.9e-94	314.9	0.1	2.1e-94	314.7	0.1	1.0	1	0	0	1	1	1	1	PINc	domain	ribonuclease
HicB_lk_antitox	PF15919.5	gi|298674957|ref|YP_003726707.1|	-	0.0045	17.1	0.0	0.016	15.3	0.0	1.9	2	0	0	2	2	2	1	HicB_like	antitoxin	of	bacterial	toxin-antitoxin	system
Collectrin	PF16959.5	gi|298674957|ref|YP_003726707.1|	-	0.082	12.7	0.1	0.13	12.1	0.1	1.2	1	0	0	1	1	1	0	Renal	amino	acid	transporter
B12-binding	PF02310.19	gi|298674958|ref|YP_003726708.1|	-	3.9e-24	85.0	0.7	6e-24	84.4	0.6	1.4	1	1	0	1	1	1	1	B12	binding	domain
B12-binding_2	PF02607.17	gi|298674958|ref|YP_003726708.1|	-	1e-18	67.5	0.3	2.4e-18	66.3	0.0	1.8	2	0	0	2	2	2	1	B12	binding	domain
OrfB_IS605	PF01385.19	gi|298674959|ref|YP_003726709.1|	-	8.5e-26	90.5	0.8	2.2e-25	89.2	0.0	2.0	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674959|ref|YP_003726709.1|	-	9.1e-12	44.7	0.3	2.4e-11	43.4	0.1	1.9	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
RuvX	PF03652.15	gi|298674959|ref|YP_003726709.1|	-	0.017	15.5	0.0	0.034	14.5	0.0	1.4	1	0	0	1	1	1	0	Holliday	junction	resolvase
AAA	PF00004.29	gi|298674960|ref|YP_003726710.1|	-	7.7e-97	320.8	0.1	3.7e-47	160.1	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|298674960|ref|YP_003726710.1|	-	8.4e-34	115.1	0.3	5.5e-17	61.3	0.1	2.9	2	0	0	2	2	2	2	AAA+	lid	domain
CDC48_N	PF02359.18	gi|298674960|ref|YP_003726710.1|	-	6.8e-24	83.9	1.0	1.1e-22	80.0	2.1	2.5	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_2	PF07724.14	gi|298674960|ref|YP_003726710.1|	-	4.5e-16	59.4	0.0	4.8e-07	30.0	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.6	gi|298674960|ref|YP_003726710.1|	-	5.3e-14	52.9	0.2	0.00017	22.1	0.0	4.1	3	2	1	4	4	3	2	AAA	ATPase	domain
RuvB_N	PF05496.12	gi|298674960|ref|YP_003726710.1|	-	2.8e-13	49.9	0.0	2.3e-05	24.2	0.0	2.9	2	2	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
CDC48_2	PF02933.17	gi|298674960|ref|YP_003726710.1|	-	4.9e-13	48.7	0.0	1.9e-12	46.8	0.0	2.0	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_14	PF13173.6	gi|298674960|ref|YP_003726710.1|	-	2.1e-10	40.8	0.0	0.0002	21.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|298674960|ref|YP_003726710.1|	-	3.2e-10	40.4	2.3	0.0072	16.6	0.1	4.3	2	2	2	4	4	4	2	AAA	domain
TIP49	PF06068.13	gi|298674960|ref|YP_003726710.1|	-	3.8e-10	39.5	0.0	0.00016	21.0	0.0	2.8	2	0	0	2	2	2	2	TIP49	P-loop	domain
AAA_5	PF07728.14	gi|298674960|ref|YP_003726710.1|	-	1.1e-09	38.4	2.8	0.00059	19.8	0.4	4.4	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.6	gi|298674960|ref|YP_003726710.1|	-	1.9e-09	37.8	0.0	0.001	19.2	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Vps4_C	PF09336.10	gi|298674960|ref|YP_003726710.1|	-	1.8e-08	34.2	0.7	0.0018	18.3	0.0	3.4	2	1	1	3	3	3	2	Vps4	C	terminal	oligomerisation	domain
Sigma54_activat	PF00158.26	gi|298674960|ref|YP_003726710.1|	-	1.6e-07	31.2	0.3	0.082	12.6	0.1	3.8	2	2	0	2	2	2	2	Sigma-54	interaction	domain
AAA_24	PF13479.6	gi|298674960|ref|YP_003726710.1|	-	3.7e-07	30.1	0.0	0.032	14.0	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.6	gi|298674960|ref|YP_003726710.1|	-	8.4e-07	29.6	0.0	0.051	14.1	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.17	gi|298674960|ref|YP_003726710.1|	-	9.5e-07	28.7	0.0	0.039	13.7	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
RNA_helicase	PF00910.22	gi|298674960|ref|YP_003726710.1|	-	2.1e-06	28.0	0.0	0.046	14.1	0.0	2.8	2	1	0	2	2	2	2	RNA	helicase
ABC_tran	PF00005.27	gi|298674960|ref|YP_003726710.1|	-	3e-06	27.8	0.0	0.095	13.2	0.0	2.6	2	0	0	2	2	2	2	ABC	transporter
AAA_25	PF13481.6	gi|298674960|ref|YP_003726710.1|	-	3.3e-06	26.8	2.6	0.54	9.8	0.0	4.3	4	0	0	4	4	4	1	AAA	domain
Mg_chelatase	PF01078.21	gi|298674960|ref|YP_003726710.1|	-	4.4e-06	26.2	0.1	0.0091	15.4	0.0	2.6	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
ATPase_2	PF01637.18	gi|298674960|ref|YP_003726710.1|	-	9.2e-06	25.7	1.0	0.31	10.9	0.1	4.1	3	2	1	4	4	4	2	ATPase	domain	predominantly	from	Archaea
AAA_7	PF12775.7	gi|298674960|ref|YP_003726710.1|	-	1.1e-05	25.1	0.0	0.043	13.3	0.0	2.6	2	0	0	2	2	2	2	P-loop	containing	dynein	motor	region
Bac_DnaA	PF00308.18	gi|298674960|ref|YP_003726710.1|	-	1.5e-05	25.0	0.0	0.014	15.2	0.0	2.6	2	0	0	2	2	2	1	Bacterial	dnaA	protein
AAA_28	PF13521.6	gi|298674960|ref|YP_003726710.1|	-	1.8e-05	25.0	0.0	0.19	12.0	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
DUF815	PF05673.13	gi|298674960|ref|YP_003726710.1|	-	4.1e-05	22.9	0.0	0.043	13.0	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
PhoH	PF02562.16	gi|298674960|ref|YP_003726710.1|	-	6.4e-05	22.5	0.5	0.13	11.7	0.1	2.7	2	0	0	2	2	2	2	PhoH-like	protein
NACHT	PF05729.12	gi|298674960|ref|YP_003726710.1|	-	0.00014	21.9	0.4	0.34	10.8	0.0	3.7	3	1	1	4	4	4	1	NACHT	domain
DUF2075	PF09848.9	gi|298674960|ref|YP_003726710.1|	-	0.00028	20.2	0.0	0.11	11.7	0.0	2.2	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_30	PF13604.6	gi|298674960|ref|YP_003726710.1|	-	0.00045	20.0	0.1	0.24	11.1	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
AAA_3	PF07726.11	gi|298674960|ref|YP_003726710.1|	-	0.0011	18.8	0.0	0.087	12.7	0.0	2.5	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TniB	PF05621.11	gi|298674960|ref|YP_003726710.1|	-	0.0012	18.3	0.1	6.6	6.1	0.0	4.0	5	0	0	5	5	4	0	Bacterial	TniB	protein
Zeta_toxin	PF06414.12	gi|298674960|ref|YP_003726710.1|	-	0.0014	17.9	0.1	0.7	9.1	0.0	2.6	2	0	0	2	2	2	1	Zeta	toxin
Guanylate_kin	PF00625.21	gi|298674960|ref|YP_003726710.1|	-	0.0016	18.2	1.5	6	6.5	0.0	4.3	3	1	1	4	4	4	0	Guanylate	kinase
Parvo_NS1	PF01057.17	gi|298674960|ref|YP_003726710.1|	-	0.0016	17.6	0.1	1.4	8.0	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
TsaE	PF02367.17	gi|298674960|ref|YP_003726710.1|	-	0.002	18.1	0.0	1.4	8.9	0.0	2.6	2	1	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_17	PF13207.6	gi|298674960|ref|YP_003726710.1|	-	0.002	18.6	0.0	0.68	10.3	0.0	3.1	2	0	0	2	2	2	1	AAA	domain
AFG1_ATPase	PF03969.16	gi|298674960|ref|YP_003726710.1|	-	0.0031	16.4	0.0	0.43	9.4	0.0	2.3	2	0	0	2	2	2	1	AFG1-like	ATPase
ATPase	PF06745.13	gi|298674960|ref|YP_003726710.1|	-	0.0032	16.8	3.5	0.84	8.9	0.1	3.7	2	2	2	4	4	4	1	KaiC
NB-ARC	PF00931.22	gi|298674960|ref|YP_003726710.1|	-	0.0042	16.3	0.0	3.4	6.8	0.0	2.6	3	0	0	3	3	2	0	NB-ARC	domain
KAP_NTPase	PF07693.14	gi|298674960|ref|YP_003726710.1|	-	0.0057	15.9	0.0	5.3	6.2	0.0	3.3	2	2	0	3	3	3	0	KAP	family	P-loop	domain
Cytidylate_kin	PF02224.18	gi|298674960|ref|YP_003726710.1|	-	0.011	15.5	0.2	0.91	9.2	0.0	2.7	2	0	0	2	2	2	0	Cytidylate	kinase
AAA_19	PF13245.6	gi|298674960|ref|YP_003726710.1|	-	0.012	16.0	4.2	0.32	11.3	0.2	3.1	2	2	0	3	3	2	0	AAA	domain
Sigma54_activ_2	PF14532.6	gi|298674960|ref|YP_003726710.1|	-	0.047	13.8	0.0	12	6.1	0.0	2.7	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_29	PF13555.6	gi|298674960|ref|YP_003726710.1|	-	0.062	13.0	0.1	13	5.7	0.0	2.9	3	0	0	3	3	2	0	P-loop	containing	region	of	AAA	domain
PduV-EutP	PF10662.9	gi|298674960|ref|YP_003726710.1|	-	0.073	12.8	0.0	8.9	6.0	0.0	2.7	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
IPT	PF01745.16	gi|298674960|ref|YP_003726710.1|	-	0.079	12.3	0.1	3.1	7.1	0.1	2.5	2	0	0	2	2	2	0	Isopentenyl	transferase
Cytidylate_kin2	PF13189.6	gi|298674960|ref|YP_003726710.1|	-	0.09	12.9	0.1	2	8.5	0.0	2.4	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
AAA_11	PF13086.6	gi|298674960|ref|YP_003726710.1|	-	0.11	12.3	0.0	4.1	7.1	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
ResIII	PF04851.15	gi|298674960|ref|YP_003726710.1|	-	0.11	12.5	0.3	9.4	6.2	0.0	2.9	3	1	1	4	4	2	0	Type	III	restriction	enzyme,	res	subunit
DAP3	PF10236.9	gi|298674960|ref|YP_003726710.1|	-	0.11	11.6	0.0	4.8	6.3	0.0	2.3	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
Zot	PF05707.12	gi|298674960|ref|YP_003726710.1|	-	0.15	11.7	0.2	43	3.7	0.0	3.3	2	2	1	3	3	3	0	Zonular	occludens	toxin	(Zot)
NTPase_1	PF03266.15	gi|298674960|ref|YP_003726710.1|	-	0.23	11.4	6.0	10	6.0	0.0	4.6	3	2	2	5	5	5	0	NTPase
AAA_21	PF13304.6	gi|298674960|ref|YP_003726710.1|	-	3.6	7.3	4.7	46	3.7	0.1	3.5	2	2	1	4	4	4	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
4HFCP_synth	PF04476.13	gi|298674961|ref|YP_003726711.1|	-	3.3e-92	308.3	0.0	3.7e-92	308.2	0.0	1.0	1	0	0	1	1	1	1	4-HFC-P	synthase
QRPTase_C	PF01729.19	gi|298674961|ref|YP_003726711.1|	-	0.0012	18.6	0.0	0.012	15.4	0.0	2.1	1	1	1	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
His_biosynth	PF00977.21	gi|298674962|ref|YP_003726712.1|	-	6.5e-33	114.1	0.7	7.4e-33	113.9	0.7	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
ThiG	PF05690.14	gi|298674962|ref|YP_003726712.1|	-	0.035	13.4	1.1	0.33	10.2	0.2	2.0	1	1	1	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
Thymidylate_kin	PF02223.17	gi|298674964|ref|YP_003726714.1|	-	6.5e-45	153.1	0.0	7.5e-45	152.9	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
dNK	PF01712.19	gi|298674964|ref|YP_003726714.1|	-	1.3e-08	35.0	0.1	2.6e-08	34.0	0.1	1.5	1	1	0	1	1	1	1	Deoxynucleoside	kinase
AAA_18	PF13238.6	gi|298674964|ref|YP_003726714.1|	-	2.6e-06	28.0	0.0	5.5e-06	27.0	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|298674964|ref|YP_003726714.1|	-	1.3e-05	25.4	0.0	3.4e-05	24.0	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|298674964|ref|YP_003726714.1|	-	0.0025	17.1	0.0	0.0055	16.0	0.0	1.8	1	1	0	1	1	1	1	Zeta	toxin
AAA_28	PF13521.6	gi|298674964|ref|YP_003726714.1|	-	0.0049	17.1	0.0	0.0065	16.7	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|298674964|ref|YP_003726714.1|	-	0.013	15.8	0.0	0.48	10.7	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.6	gi|298674964|ref|YP_003726714.1|	-	0.042	13.9	0.3	1.2	9.2	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_17	PF13207.6	gi|298674964|ref|YP_003726714.1|	-	0.05	14.0	0.0	2.1	8.8	0.0	2.5	1	1	0	1	1	1	0	AAA	domain
HypA	PF01155.19	gi|298674965|ref|YP_003726715.1|	-	0.00014	21.9	0.3	0.00015	21.8	0.3	1.0	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn-ribbon_8	PF09723.10	gi|298674965|ref|YP_003726715.1|	-	0.00017	21.6	2.2	0.00024	21.1	2.2	1.3	1	0	0	1	1	1	1	Zinc	ribbon	domain
zinc_ribbon_6	PF14599.6	gi|298674965|ref|YP_003726715.1|	-	0.0065	16.5	0.3	0.0073	16.3	0.3	1.1	1	0	0	1	1	1	1	Zinc-ribbon
Ribosomal_S27e	PF01667.17	gi|298674965|ref|YP_003726715.1|	-	0.0085	15.8	2.1	0.02	14.6	0.1	2.0	1	1	1	2	2	2	1	Ribosomal	protein	S27
PhnA_Zn_Ribbon	PF08274.12	gi|298674965|ref|YP_003726715.1|	-	0.0088	16.0	0.9	0.041	13.8	0.1	2.0	2	0	0	2	2	2	1	PhnA	Zinc-Ribbon
TFIIS_C	PF01096.18	gi|298674965|ref|YP_003726715.1|	-	0.023	14.5	4.8	1.8	8.5	0.5	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_5	PF13719.6	gi|298674965|ref|YP_003726715.1|	-	0.037	13.8	1.1	0.4	10.5	0.4	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
Prok-RING_1	PF14446.6	gi|298674965|ref|YP_003726715.1|	-	0.039	13.9	0.8	0.056	13.4	0.8	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
FAM35_C	PF15793.5	gi|298674965|ref|YP_003726715.1|	-	0.048	13.0	0.2	0.048	13.0	0.2	1.0	1	0	0	1	1	1	0	Protein	family	FAM35,	C-terminal
DNA_RNApol_7kD	PF03604.13	gi|298674965|ref|YP_003726715.1|	-	0.052	13.2	1.0	0.095	12.4	1.0	1.5	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_4	PF13717.6	gi|298674965|ref|YP_003726715.1|	-	0.14	12.1	4.0	1.1	9.2	0.8	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|298674965|ref|YP_003726715.1|	-	0.2	11.4	5.7	2.5	7.9	0.6	2.1	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
zf-AN1	PF01428.16	gi|298674965|ref|YP_003726715.1|	-	0.22	11.7	4.7	1.6	9.0	0.2	2.1	1	1	1	2	2	2	0	AN1-like	Zinc	finger
zf-C2H2_4	PF13894.6	gi|298674965|ref|YP_003726715.1|	-	0.75	10.8	4.5	9.9	7.3	0.6	2.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-C2H2	PF00096.26	gi|298674965|ref|YP_003726715.1|	-	1.2	9.7	4.0	6	7.5	0.5	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-H2C2_5	PF13909.6	gi|298674965|ref|YP_003726715.1|	-	2.6	7.9	5.4	11	5.9	0.2	2.1	2	0	0	2	2	2	0	C2H2-type	zinc-finger	domain
DUF166	PF02593.14	gi|298674966|ref|YP_003726716.1|	-	7.7e-65	218.5	0.0	8.7e-65	218.3	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function
DapB_N	PF01113.20	gi|298674966|ref|YP_003726716.1|	-	8.5e-05	22.7	0.0	0.00017	21.7	0.0	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
HHH_8	PF14716.6	gi|298674967|ref|YP_003726717.1|	-	1.4e-18	67.0	1.4	1.5e-16	60.5	0.1	3.6	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
DNA_pol_B_thumb	PF14791.6	gi|298674967|ref|YP_003726717.1|	-	2.4e-16	59.7	0.0	5.3e-16	58.5	0.0	1.6	1	0	0	1	1	1	1	DNA	polymerase	beta	thumb
HHH_5	PF14520.6	gi|298674967|ref|YP_003726717.1|	-	1.7e-13	50.9	0.2	1.6e-09	38.2	0.0	3.7	3	1	2	5	5	5	2	Helix-hairpin-helix	domain
PHP	PF02811.19	gi|298674967|ref|YP_003726717.1|	-	9.9e-07	29.2	0.6	2.4e-06	27.9	0.2	2.0	2	0	0	2	2	2	1	PHP	domain
HHH	PF00633.23	gi|298674967|ref|YP_003726717.1|	-	2.3e-05	24.0	0.0	0.0085	15.9	0.0	3.0	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
DNA_pol_lambd_f	PF10391.9	gi|298674967|ref|YP_003726717.1|	-	0.00012	21.8	0.0	0.00089	19.0	0.0	2.6	3	0	0	3	3	3	1	Fingers	domain	of	DNA	polymerase	lambda
Cdd1	PF11731.8	gi|298674967|ref|YP_003726717.1|	-	0.0003	21.0	0.0	0.032	14.5	0.0	2.8	1	1	1	2	2	2	1	Pathogenicity	locus
RNase_P_p30	PF01876.16	gi|298674967|ref|YP_003726717.1|	-	0.00094	18.7	0.8	0.0027	17.2	0.0	2.2	3	0	0	3	3	3	1	RNase	P	subunit	p30
TfoX_C	PF04994.13	gi|298674967|ref|YP_003726717.1|	-	0.041	14.0	0.0	17	5.6	0.0	2.8	1	1	1	2	2	2	0	TfoX	C-terminal	domain
DNA_pol_B_palm	PF14792.6	gi|298674967|ref|YP_003726717.1|	-	0.041	14.1	0.3	0.24	11.6	0.0	2.4	2	0	0	2	2	2	0	DNA	polymerase	beta	palm
DUF2114	PF09887.9	gi|298674968|ref|YP_003726718.1|	-	2.2e-235	781.3	3.8	2.5e-235	781.1	3.8	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2114)
Pan_kinase	PF03309.14	gi|298674968|ref|YP_003726718.1|	-	0.02	14.7	0.0	7	6.4	0.0	2.7	3	0	0	3	3	3	0	Type	III	pantothenate	kinase
R_equi_Vir	PF05526.11	gi|298674968|ref|YP_003726718.1|	-	0.021	14.7	0.0	0.04	13.8	0.0	1.4	1	0	0	1	1	1	0	Rhodococcus	equi	virulence-associated	protein
ASFV_360	PF01671.16	gi|298674968|ref|YP_003726718.1|	-	0.079	12.4	0.0	0.15	11.6	0.0	1.3	1	0	0	1	1	1	0	African	swine	fever	virus	multigene	family	360	protein
Thioredoxin	PF00085.20	gi|298674969|ref|YP_003726719.1|	-	1.3e-28	98.9	0.1	1.7e-28	98.6	0.1	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|298674969|ref|YP_003726719.1|	-	1.5e-07	31.9	0.3	1.1e-06	29.0	0.1	2.2	2	1	0	2	2	2	1	Thioredoxin-like	domain
OST3_OST6	PF04756.13	gi|298674969|ref|YP_003726719.1|	-	2.2e-07	30.5	0.0	2.4e-07	30.4	0.0	1.1	1	0	0	1	1	1	1	OST3	/	OST6	family,	transporter	family
Thioredoxin_8	PF13905.6	gi|298674969|ref|YP_003726719.1|	-	4.6e-07	30.1	0.1	0.00095	19.4	0.0	2.5	2	1	1	3	3	3	2	Thioredoxin-like
AhpC-TSA	PF00578.21	gi|298674969|ref|YP_003726719.1|	-	2.9e-05	24.0	0.2	0.001	19.0	0.1	2.1	1	1	1	2	2	2	1	AhpC/TSA	family
Thioredoxin_6	PF13848.6	gi|298674969|ref|YP_003726719.1|	-	6.7e-05	22.9	0.0	8.8e-05	22.5	0.0	1.4	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_3	PF13192.6	gi|298674969|ref|YP_003726719.1|	-	0.00025	21.0	0.4	0.00054	20.0	0.0	1.8	2	1	0	2	2	2	1	Thioredoxin	domain
Thioredoxin_9	PF14595.6	gi|298674969|ref|YP_003726719.1|	-	0.00066	19.5	0.2	0.00097	18.9	0.2	1.4	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_7	PF13899.6	gi|298674969|ref|YP_003726719.1|	-	0.0034	17.5	0.0	0.0056	16.8	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Redoxin	PF08534.10	gi|298674969|ref|YP_003726719.1|	-	0.0042	16.8	0.2	0.019	14.7	0.1	1.9	1	1	1	2	2	2	1	Redoxin
TraF	PF13728.6	gi|298674969|ref|YP_003726719.1|	-	0.0054	16.6	0.1	0.013	15.4	0.0	1.6	1	1	0	1	1	1	1	F	plasmid	transfer	operon	protein
Glutaredoxin	PF00462.24	gi|298674969|ref|YP_003726719.1|	-	0.022	14.9	0.2	0.098	12.9	0.0	2.1	1	1	1	2	2	2	0	Glutaredoxin
HyaE	PF07449.11	gi|298674969|ref|YP_003726719.1|	-	0.047	13.7	0.0	0.063	13.2	0.0	1.4	1	1	0	1	1	1	0	Hydrogenase-1	expression	protein	HyaE
Mrr_cat	PF04471.12	gi|298674970|ref|YP_003726720.1|	-	4e-31	107.4	0.2	7e-31	106.6	0.2	1.4	1	0	0	1	1	1	1	Restriction	endonuclease
Mrr_cat_2	PF13156.6	gi|298674970|ref|YP_003726720.1|	-	1.4e-10	41.1	0.1	3e-10	40.1	0.1	1.5	1	0	0	1	1	1	1	Restriction	endonuclease
DUF2691	PF10903.8	gi|298674970|ref|YP_003726720.1|	-	0.0013	18.6	1.1	0.0034	17.3	0.4	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2691)
PBP5_C	PF07943.13	gi|298674970|ref|YP_003726720.1|	-	0.11	12.7	2.2	0.88	9.8	0.1	2.5	1	1	1	2	2	2	0	Penicillin-binding	protein	5,	C-terminal	domain
E1-E2_ATPase	PF00122.20	gi|298674971|ref|YP_003726721.1|	-	3.2e-56	189.7	4.2	1.3e-55	187.7	2.6	2.4	2	0	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|298674971|ref|YP_003726721.1|	-	1.6e-44	152.7	4.6	3.2e-44	151.7	4.6	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.26	gi|298674971|ref|YP_003726721.1|	-	6.1e-44	148.3	19.2	9.5e-15	54.8	0.4	4.5	4	0	0	4	4	4	3	Heavy-metal-associated	domain
Hydrolase_3	PF08282.12	gi|298674971|ref|YP_003726721.1|	-	6.3e-06	26.1	3.4	6e-05	22.9	1.3	2.4	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Tox-PL-2	PF15643.6	gi|298674971|ref|YP_003726721.1|	-	0.0018	18.4	0.2	1.9	8.6	0.0	3.4	4	0	0	4	4	4	1	Papain	fold	toxin	2
Fer2_BFD	PF04324.15	gi|298674971|ref|YP_003726721.1|	-	0.014	15.8	3.0	16	6.0	0.1	4.4	4	0	0	4	4	4	0	BFD-like	[2Fe-2S]	binding	domain
Thioredoxin_3	PF13192.6	gi|298674971|ref|YP_003726721.1|	-	0.019	15.0	4.0	9.7	6.3	0.1	3.8	3	0	0	3	3	3	0	Thioredoxin	domain
HAD	PF12710.7	gi|298674971|ref|YP_003726721.1|	-	0.064	13.7	0.0	0.32	11.4	0.0	2.0	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
FeS_assembly_P	PF01883.19	gi|298674971|ref|YP_003726721.1|	-	0.092	12.9	0.7	4.2	7.6	0.0	3.3	3	0	0	3	3	3	0	Iron-sulfur	cluster	assembly	protein
Methyltr_RsmB-F	PF01189.17	gi|298674971|ref|YP_003726721.1|	-	0.11	12.2	0.2	0.27	10.8	0.2	1.7	1	0	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
Rhabdo_matrix	PF03397.14	gi|298674971|ref|YP_003726721.1|	-	0.12	12.1	0.0	2.1	8.1	0.0	2.4	2	0	0	2	2	2	0	Rhabdovirus	matrix	protein
RRM_3	PF08777.11	gi|298674971|ref|YP_003726721.1|	-	0.33	11.0	2.7	3.2	7.9	0.1	3.0	3	0	0	3	3	2	0	RNA	binding	motif
DUF2970	PF11174.8	gi|298674972|ref|YP_003726722.1|	-	0.016	15.1	4.1	0.45	10.4	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2970)
Keratin_assoc	PF09775.9	gi|298674972|ref|YP_003726722.1|	-	0.023	14.4	2.0	0.026	14.2	2.0	1.1	1	0	0	1	1	1	0	Keratinocyte-associated	protein	2
PilX_N	PF14341.6	gi|298674972|ref|YP_003726722.1|	-	0.32	11.0	3.4	2.7	8.0	0.1	2.2	2	0	0	2	2	2	0	PilX	N-terminal
S_2TMBeta	PF18153.1	gi|298674972|ref|YP_003726722.1|	-	0.33	10.7	4.6	0.41	10.4	4.6	1.2	1	0	0	1	1	1	0	SMODS-associating	2TM,	beta-strand	rich	effector	domain
Vma12	PF11712.8	gi|298674972|ref|YP_003726722.1|	-	0.79	9.8	3.7	0.92	9.6	3.7	1.2	1	1	0	1	1	1	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
Radical_SAM	PF04055.21	gi|298674973|ref|YP_003726723.1|	-	4e-13	50.1	0.1	5.7e-13	49.6	0.1	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
FrhB_FdhB_C	PF04432.13	gi|298674974|ref|YP_003726724.1|	-	1.8e-36	125.3	0.0	1.8e-36	125.3	0.0	1.9	2	0	0	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|298674974|ref|YP_003726724.1|	-	3.4e-24	84.8	0.1	9.3e-23	80.2	0.1	2.5	2	0	0	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
YHS	PF04945.13	gi|298674974|ref|YP_003726724.1|	-	8.2e-07	29.0	2.1	2.3e-06	27.6	2.1	1.7	1	0	0	1	1	1	1	YHS	domain
Fer4	PF00037.27	gi|298674974|ref|YP_003726724.1|	-	6.9e-05	22.5	14.7	0.0097	15.7	3.5	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298674974|ref|YP_003726724.1|	-	0.00073	19.6	13.3	0.00073	19.6	13.3	2.7	2	1	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298674974|ref|YP_003726724.1|	-	0.0044	17.1	13.4	0.0044	17.1	13.4	3.0	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298674974|ref|YP_003726724.1|	-	0.0047	17.3	1.5	0.0047	17.3	1.5	3.6	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298674974|ref|YP_003726724.1|	-	0.016	15.3	17.4	0.11	12.6	2.9	2.9	3	0	0	3	3	2	0	4Fe-4S	binding	domain
ATPase-cat_bd	PF12156.8	gi|298674974|ref|YP_003726724.1|	-	0.016	15.9	1.0	0.016	15.9	1.0	2.6	2	0	0	2	2	2	0	Putative	metal-binding	domain	of	cation	transport	ATPase
Fer4_21	PF14697.6	gi|298674974|ref|YP_003726724.1|	-	0.016	15.3	11.5	0.051	13.7	11.5	1.9	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298674974|ref|YP_003726724.1|	-	0.075	13.6	18.2	0.31	11.6	2.4	3.1	2	1	1	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298674974|ref|YP_003726724.1|	-	0.15	12.2	19.7	0.24	11.6	4.2	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298674974|ref|YP_003726724.1|	-	0.26	11.7	18.2	0.099	13.1	2.1	3.0	2	1	3	5	5	4	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298674974|ref|YP_003726724.1|	-	0.44	11.3	8.8	1.7	9.4	0.1	2.9	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.6	gi|298674974|ref|YP_003726724.1|	-	0.54	11.2	15.2	0.38	11.7	0.5	3.2	3	1	1	4	4	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|298674974|ref|YP_003726724.1|	-	0.56	10.8	21.8	0.33	11.6	15.3	3.2	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298674974|ref|YP_003726724.1|	-	1.3	9.2	8.9	0.27	11.5	1.1	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Glu-tRNAGln	PF02686.15	gi|298674975|ref|YP_003726725.1|	-	1.5e-20	73.3	0.9	2.1e-20	72.8	0.9	1.2	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
DUF2420	PF10336.9	gi|298674975|ref|YP_003726725.1|	-	0.082	12.9	0.2	0.12	12.4	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2420)
Amidase	PF01425.21	gi|298674976|ref|YP_003726726.1|	-	5.1e-159	530.0	0.1	5.8e-159	529.8	0.1	1.0	1	0	0	1	1	1	1	Amidase
GatB_N	PF02934.15	gi|298674977|ref|YP_003726727.1|	-	1.1e-103	346.3	0.0	1.8e-103	345.7	0.0	1.3	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|298674977|ref|YP_003726727.1|	-	1.1e-43	148.6	3.6	1.9e-43	147.9	3.6	1.4	1	0	0	1	1	1	1	GatB	domain
DUF498	PF04430.14	gi|298674978|ref|YP_003726728.1|	-	1.5e-16	60.4	0.0	1.7e-16	60.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF498/DUF598)
DUF1104	PF06518.11	gi|298674978|ref|YP_003726728.1|	-	0.035	14.5	0.1	0.11	12.9	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1104)
Indigoidine_A	PF04227.12	gi|298674978|ref|YP_003726728.1|	-	0.11	11.9	0.0	0.12	11.7	0.0	1.1	1	0	0	1	1	1	0	Indigoidine	synthase	A	like	protein
Pyr_redox	PF00070.27	gi|298674978|ref|YP_003726728.1|	-	0.13	12.8	1.1	0.4	11.3	1.1	1.9	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
DJ-1_PfpI	PF01965.24	gi|298674979|ref|YP_003726729.1|	-	2.4e-40	138.1	0.3	2.6e-40	137.9	0.3	1.0	1	0	0	1	1	1	1	DJ-1/PfpI	family
ThiJ_like	PF17124.5	gi|298674979|ref|YP_003726729.1|	-	0.00022	21.0	0.0	0.0023	17.7	0.0	1.9	1	1	0	1	1	1	1	ThiJ/PfpI	family-like
Catalase_C	PF18011.1	gi|298674979|ref|YP_003726729.1|	-	0.0099	15.5	0.1	0.013	15.2	0.1	1.3	1	0	0	1	1	1	1	C-terminal	domain	found	in	long	catalases
GATase_3	PF07685.14	gi|298674979|ref|YP_003726729.1|	-	0.064	12.9	0.0	0.1	12.2	0.0	1.3	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|298674979|ref|YP_003726729.1|	-	0.075	12.8	0.0	0.15	11.8	0.0	1.5	1	1	0	1	1	1	0	Glutamine	amidotransferase	class-I
DUF705	PF05152.12	gi|298674979|ref|YP_003726729.1|	-	0.082	12.4	0.0	0.1	12.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF705)
DUF2124	PF09897.9	gi|298674979|ref|YP_003726729.1|	-	0.091	12.7	0.1	0.73	9.7	0.1	2.0	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2124)
UPF0029	PF01205.19	gi|298674980|ref|YP_003726730.1|	-	4.2e-29	101.0	0.0	6.1e-29	100.5	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0029
DUF1949	PF09186.11	gi|298674980|ref|YP_003726730.1|	-	1.9e-05	24.4	0.2	3.8e-05	23.5	0.2	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1949)
OrfB_IS605	PF01385.19	gi|298674980|ref|YP_003726730.1|	-	0.064	13.5	0.4	0.15	12.3	0.1	1.7	2	0	0	2	2	2	0	Probable	transposase
OrfB_IS605	PF01385.19	gi|298674981|ref|YP_003726731.1|	-	2.8e-22	79.2	0.2	1.1e-21	77.3	0.0	2.0	2	1	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298674981|ref|YP_003726731.1|	-	1.1e-10	41.3	0.4	3.9e-10	39.5	0.1	2.2	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
DUF919	PF06034.11	gi|298674981|ref|YP_003726731.1|	-	0.00055	19.7	0.3	0.0017	18.2	0.3	1.8	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
RuvX	PF03652.15	gi|298674981|ref|YP_003726731.1|	-	0.0078	16.6	0.0	0.019	15.3	0.0	1.6	1	0	0	1	1	1	1	Holliday	junction	resolvase
MOR2-PAG1_C	PF14225.6	gi|298674981|ref|YP_003726731.1|	-	0.12	12.2	0.1	0.25	11.2	0.0	1.5	2	0	0	2	2	2	0	Cell	morphogenesis	C-terminal
L71	PF02448.15	gi|298674982|ref|YP_003726732.1|	-	0.029	14.8	0.6	0.054	13.9	0.6	1.4	1	0	0	1	1	1	0	L71	family
DUF1699	PF08004.11	gi|298674983|ref|YP_003726733.1|	-	6e-63	210.3	1.4	6.7e-63	210.2	1.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1699)
Na_Ca_ex	PF01699.24	gi|298674984|ref|YP_003726734.1|	-	2.8e-54	183.2	42.3	1.7e-28	99.5	16.2	2.0	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
Flg_bb_rod	PF00460.20	gi|298674984|ref|YP_003726734.1|	-	3.2	7.8	12.3	0.23	11.5	2.1	2.9	3	0	0	3	3	3	0	Flagella	basal	body	rod	protein
DUF2117	PF09890.9	gi|298674985|ref|YP_003726735.1|	-	1.6e-73	246.7	0.8	2e-73	246.4	0.8	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2117)
NAD_kinase	PF01513.21	gi|298674985|ref|YP_003726735.1|	-	0.0075	15.5	0.1	0.011	15.0	0.1	1.2	1	0	0	1	1	1	1	ATP-NAD	kinase
HTH_34	PF13601.6	gi|298674986|ref|YP_003726736.1|	-	0.00058	20.0	0.0	0.0011	19.1	0.0	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.14	gi|298674986|ref|YP_003726736.1|	-	0.0019	18.1	0.0	0.0038	17.1	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.19	gi|298674986|ref|YP_003726736.1|	-	0.047	13.6	0.0	0.069	13.0	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
FKBP_N_2	PF18023.1	gi|298674987|ref|YP_003726737.1|	-	0.0089	16.1	0.4	0.01	15.9	0.4	1.1	1	0	0	1	1	1	1	BDBT	FKBP	like	N-terminal
ThiS	PF02597.20	gi|298674987|ref|YP_003726737.1|	-	0.07	13.8	0.2	0.088	13.5	0.2	1.3	1	0	0	1	1	1	0	ThiS	family
Fer4	PF00037.27	gi|298674990|ref|YP_003726740.1|	-	1.7e-13	49.8	14.2	5e-07	29.3	2.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298674990|ref|YP_003726740.1|	-	7.1e-12	45.3	22.3	1.6e-08	34.6	13.0	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298674990|ref|YP_003726740.1|	-	2.3e-11	43.2	15.3	1.8e-06	27.8	2.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298674990|ref|YP_003726740.1|	-	8.7e-11	42.2	11.5	1.5e-10	41.5	11.5	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298674990|ref|YP_003726740.1|	-	5.3e-09	35.9	12.6	0.00017	21.8	3.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298674990|ref|YP_003726740.1|	-	8.5e-09	35.4	13.2	1.4e-08	34.7	13.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298674990|ref|YP_003726740.1|	-	1e-08	36.0	11.4	0.00037	21.4	1.0	2.3	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|298674990|ref|YP_003726740.1|	-	8.9e-08	31.8	15.9	0.00032	20.6	3.7	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298674990|ref|YP_003726740.1|	-	1.4e-07	31.9	4.1	0.0064	17.0	0.9	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298674990|ref|YP_003726740.1|	-	1.6e-07	31.7	4.4	0.0046	17.4	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298674990|ref|YP_003726740.1|	-	8.6e-07	29.0	14.3	0.0021	18.2	3.0	2.1	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298674990|ref|YP_003726740.1|	-	2.2e-06	28.1	16.3	0.00034	21.1	4.1	2.3	1	1	1	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|298674990|ref|YP_003726740.1|	-	2.8e-05	24.3	11.8	0.00031	20.9	12.3	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298674990|ref|YP_003726740.1|	-	3.4e-05	24.6	6.3	0.03	15.2	0.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298674990|ref|YP_003726740.1|	-	0.00011	22.8	18.4	0.037	14.9	5.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_19	PF06902.11	gi|298674990|ref|YP_003726740.1|	-	0.0041	17.2	5.2	0.0066	16.5	5.2	1.3	1	0	0	1	1	1	1	Divergent	4Fe-4S	mono-cluster
Fer4_15	PF13459.6	gi|298674990|ref|YP_003726740.1|	-	0.013	16.2	10.6	0.18	12.6	2.7	2.6	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain
Keratin_matx	PF04579.12	gi|298674990|ref|YP_003726740.1|	-	3.2	8.2	10.8	19	5.7	2.8	2.3	1	1	1	2	2	2	0	Keratin,	high-sulphur	matrix	protein
ETF_QO	PF05187.13	gi|298674990|ref|YP_003726740.1|	-	4.9	7.3	8.2	13	5.9	8.1	1.8	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
HcyBio	PF01837.16	gi|298674991|ref|YP_003726741.1|	-	6.6e-142	472.5	0.6	6.6e-142	472.5	0.6	1.8	2	0	0	2	2	2	1	Homocysteine	biosynthesis	enzyme,	sulfur-incorporation
CBS	PF00571.28	gi|298674991|ref|YP_003726741.1|	-	1e-26	93.1	6.0	7.8e-13	48.7	0.0	2.8	3	0	0	3	3	3	2	CBS	domain
Ribosomal_L9_C	PF03948.14	gi|298674991|ref|YP_003726741.1|	-	0.039	14.4	0.6	0.34	11.4	0.3	2.5	1	1	1	2	2	2	0	Ribosomal	protein	L9,	C-terminal	domain
FtsX	PF02687.21	gi|298674992|ref|YP_003726742.1|	-	0.091	13.2	3.4	2.9	8.4	3.4	2.3	1	1	0	1	1	1	0	FtsX-like	permease	family
CTP_transf_like	PF01467.26	gi|298674993|ref|YP_003726743.1|	-	1.5e-18	67.3	0.0	1.8e-18	67.1	0.0	1.0	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|298674993|ref|YP_003726743.1|	-	0.0027	17.6	0.0	0.048	13.6	0.0	2.1	1	1	1	2	2	2	1	FAD	synthetase
HIGH_NTase1	PF05636.11	gi|298674993|ref|YP_003726743.1|	-	0.012	14.8	0.1	2.9	7.0	0.0	2.1	2	0	0	2	2	2	0	HIGH	Nucleotidyl	Transferase
Aminotran_1_2	PF00155.21	gi|298674994|ref|YP_003726744.1|	-	4.5e-65	220.2	0.0	5.2e-65	220.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|298674994|ref|YP_003726744.1|	-	0.00063	19.2	0.1	0.0012	18.3	0.1	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.21	gi|298674994|ref|YP_003726744.1|	-	0.0019	17.6	0.0	0.0038	16.6	0.0	1.5	1	1	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.19	gi|298674994|ref|YP_003726744.1|	-	0.002	17.2	0.0	0.0053	15.8	0.0	1.7	1	1	1	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|298674994|ref|YP_003726744.1|	-	0.0091	14.6	0.0	0.015	13.9	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.13	gi|298674994|ref|YP_003726744.1|	-	0.01	14.8	0.1	1.4	7.7	0.0	2.4	2	1	0	2	2	2	0	Allinase
OKR_DC_1	PF01276.20	gi|298674994|ref|YP_003726744.1|	-	0.053	12.2	0.0	0.077	11.7	0.0	1.3	1	0	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	major	domain
DMRL_synthase	PF00885.19	gi|298674995|ref|YP_003726745.1|	-	1.2e-28	99.7	0.0	1.4e-28	99.5	0.0	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
DMRL_synthase	PF00885.19	gi|298674996|ref|YP_003726746.1|	-	6e-18	65.0	0.4	6.8e-18	64.8	0.4	1.1	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
Nitro_FeMo-Co	PF02579.17	gi|298674996|ref|YP_003726746.1|	-	0.09	13.1	0.5	0.66	10.4	0.0	2.1	2	0	0	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
PAS	PF00989.25	gi|298674996|ref|YP_003726746.1|	-	0.11	12.6	0.0	0.18	11.8	0.0	1.3	1	0	0	1	1	1	0	PAS	fold
Aminotran_5	PF00266.19	gi|298674997|ref|YP_003726747.1|	-	2.8e-42	145.0	0.0	3.5e-42	144.7	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|298674997|ref|YP_003726747.1|	-	0.1	11.8	0.0	0.2	10.9	0.0	1.5	1	1	0	1	1	1	0	Beta-eliminating	lyase
FAD_binding_2	PF00890.24	gi|298674997|ref|YP_003726747.1|	-	0.15	11.1	0.0	0.26	10.3	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
NUDIX_5	PF16705.5	gi|298674997|ref|YP_003726747.1|	-	0.18	11.5	0.0	0.38	10.5	0.0	1.5	1	0	0	1	1	1	0	NUDIX,	or	N-terminal	NPxY	motif-rich,	region	of	KRIT
CBS	PF00571.28	gi|298674998|ref|YP_003726748.1|	-	3.5e-22	78.6	0.4	8.6e-11	42.1	0.1	2.3	2	0	0	2	2	2	2	CBS	domain
HTH_3	PF01381.22	gi|298674998|ref|YP_003726748.1|	-	1.7e-12	47.2	0.0	5e-12	45.7	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.7	gi|298674998|ref|YP_003726748.1|	-	2.5e-07	30.6	0.0	4.7e-07	29.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|298674998|ref|YP_003726748.1|	-	1e-06	29.0	0.0	1.6e-06	28.3	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|298674998|ref|YP_003726748.1|	-	0.00018	21.3	0.0	0.00029	20.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Pou	PF00157.17	gi|298674998|ref|YP_003726748.1|	-	0.0013	18.7	0.0	0.0045	16.9	0.0	1.9	2	1	0	2	2	2	1	Pou	domain	-	N-terminal	to	homeobox	domain
HTH_26	PF13443.6	gi|298674998|ref|YP_003726748.1|	-	0.0042	17.5	0.0	0.014	15.8	0.0	1.9	2	0	0	2	2	2	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_37	PF13744.6	gi|298674998|ref|YP_003726748.1|	-	0.012	15.6	0.0	0.028	14.4	0.0	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
MqsA_antitoxin	PF15731.5	gi|298674998|ref|YP_003726748.1|	-	0.1	12.7	0.0	0.17	12.0	0.0	1.4	1	0	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
HTH_24	PF13412.6	gi|298674998|ref|YP_003726748.1|	-	0.12	12.0	0.0	0.73	9.4	0.0	2.3	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
AAA	PF00004.29	gi|298674999|ref|YP_003726749.1|	-	5.4e-94	311.6	0.0	4.2e-46	156.6	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|298674999|ref|YP_003726749.1|	-	2.1e-30	104.2	0.9	2.8e-16	59.1	0.2	2.7	2	0	0	2	2	2	2	AAA+	lid	domain
CDC48_N	PF02359.18	gi|298674999|ref|YP_003726749.1|	-	1.8e-25	88.9	0.7	5e-24	84.3	2.4	2.6	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_16	PF13191.6	gi|298674999|ref|YP_003726749.1|	-	2.9e-16	60.3	0.0	6.2e-07	29.9	0.0	3.5	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_2	PF07724.14	gi|298674999|ref|YP_003726749.1|	-	2.9e-14	53.6	0.0	2.7e-06	27.6	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.12	gi|298674999|ref|YP_003726749.1|	-	6.7e-13	48.7	0.0	4.9e-05	23.1	0.0	2.8	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
CDC48_2	PF02933.17	gi|298674999|ref|YP_003726749.1|	-	3.9e-12	45.8	0.4	1e-11	44.4	0.1	1.9	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_33	PF13671.6	gi|298674999|ref|YP_003726749.1|	-	1.8e-10	41.2	0.0	0.00051	20.2	0.0	2.9	2	1	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|298674999|ref|YP_003726749.1|	-	3.1e-10	40.4	0.1	0.0019	18.5	0.0	3.9	2	2	1	3	3	3	2	AAA	domain
AAA_5	PF07728.14	gi|298674999|ref|YP_003726749.1|	-	5.9e-10	39.3	3.6	0.0026	17.7	0.4	4.6	3	2	0	3	3	3	2	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.13	gi|298674999|ref|YP_003726749.1|	-	1.1e-09	38.0	0.1	0.00086	18.6	0.0	3.2	3	0	0	3	3	3	2	TIP49	P-loop	domain
AAA_14	PF13173.6	gi|298674999|ref|YP_003726749.1|	-	8.5e-09	35.5	0.0	0.0025	17.8	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.17	gi|298674999|ref|YP_003726749.1|	-	3.5e-08	33.4	0.0	0.013	15.3	0.0	3.0	3	0	0	3	3	3	2	IstB-like	ATP	binding	protein
AAA_18	PF13238.6	gi|298674999|ref|YP_003726749.1|	-	6.9e-08	33.1	0.0	0.025	15.1	0.0	3.1	3	0	0	3	3	2	2	AAA	domain
Sigma54_activat	PF00158.26	gi|298674999|ref|YP_003726749.1|	-	1.6e-07	31.2	0.0	0.014	15.1	0.0	3.1	2	1	0	2	2	2	2	Sigma-54	interaction	domain
Mg_chelatase	PF01078.21	gi|298674999|ref|YP_003726749.1|	-	2.3e-07	30.4	0.2	0.0089	15.4	0.0	2.8	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
NACHT	PF05729.12	gi|298674999|ref|YP_003726749.1|	-	3.9e-07	30.1	0.2	0.29	11.0	0.0	4.1	3	1	1	4	4	4	2	NACHT	domain
AAA_7	PF12775.7	gi|298674999|ref|YP_003726749.1|	-	7.8e-07	28.8	0.0	0.022	14.3	0.0	2.6	2	0	0	2	2	2	2	P-loop	containing	dynein	motor	region
ABC_tran	PF00005.27	gi|298674999|ref|YP_003726749.1|	-	2e-06	28.4	0.0	0.025	15.1	0.0	2.6	2	0	0	2	2	2	2	ABC	transporter
AAA_24	PF13479.6	gi|298674999|ref|YP_003726749.1|	-	5.7e-06	26.2	0.0	0.022	14.5	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Zeta_toxin	PF06414.12	gi|298674999|ref|YP_003726749.1|	-	8.2e-06	25.2	0.1	0.13	11.5	0.0	2.6	2	0	0	2	2	2	2	Zeta	toxin
AAA_28	PF13521.6	gi|298674999|ref|YP_003726749.1|	-	8.7e-06	26.1	0.0	0.14	12.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
RNA_helicase	PF00910.22	gi|298674999|ref|YP_003726749.1|	-	1.4e-05	25.5	0.0	0.13	12.7	0.0	3.1	3	0	0	3	3	2	2	RNA	helicase
TsaE	PF02367.17	gi|298674999|ref|YP_003726749.1|	-	2.2e-05	24.4	0.0	0.3	11.1	0.0	2.6	2	0	0	2	2	2	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_11	PF13086.6	gi|298674999|ref|YP_003726749.1|	-	4.2e-05	23.5	0.0	0.12	12.1	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
PhoH	PF02562.16	gi|298674999|ref|YP_003726749.1|	-	6.4e-05	22.5	0.1	0.47	9.9	0.0	2.7	2	0	0	2	2	2	2	PhoH-like	protein
AAA_30	PF13604.6	gi|298674999|ref|YP_003726749.1|	-	0.0001	22.1	0.1	0.57	9.9	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_3	PF07726.11	gi|298674999|ref|YP_003726749.1|	-	0.00011	22.1	0.0	0.5	10.2	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|298674999|ref|YP_003726749.1|	-	0.00014	21.1	0.0	0.3	10.2	0.0	2.9	3	0	0	3	3	3	2	NB-ARC	domain
DUF815	PF05673.13	gi|298674999|ref|YP_003726749.1|	-	0.00016	20.9	0.0	0.13	11.5	0.0	2.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
Parvo_NS1	PF01057.17	gi|298674999|ref|YP_003726749.1|	-	0.00026	20.2	0.0	0.23	10.5	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
Vps4_C	PF09336.10	gi|298674999|ref|YP_003726749.1|	-	0.00032	20.6	0.1	0.58	10.2	0.0	2.9	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
DUF2075	PF09848.9	gi|298674999|ref|YP_003726749.1|	-	0.00036	19.9	0.0	0.17	11.1	0.0	2.2	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
ATPase	PF06745.13	gi|298674999|ref|YP_003726749.1|	-	0.00048	19.6	2.3	0.36	10.1	0.1	3.6	3	1	0	3	3	3	1	KaiC
ATPase_2	PF01637.18	gi|298674999|ref|YP_003726749.1|	-	0.00053	20.0	0.0	0.82	9.5	0.0	3.2	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_25	PF13481.6	gi|298674999|ref|YP_003726749.1|	-	0.00087	18.9	5.5	0.43	10.1	0.4	3.8	2	2	1	3	3	3	1	AAA	domain
AAA_19	PF13245.6	gi|298674999|ref|YP_003726749.1|	-	0.0016	18.8	0.2	2.2	8.6	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_17	PF13207.6	gi|298674999|ref|YP_003726749.1|	-	0.0019	18.6	0.0	1.3	9.5	0.0	3.3	3	0	0	3	3	3	1	AAA	domain
Sigma54_activ_2	PF14532.6	gi|298674999|ref|YP_003726749.1|	-	0.0052	16.9	0.0	3.3	7.8	0.0	2.6	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Bac_DnaA	PF00308.18	gi|298674999|ref|YP_003726749.1|	-	0.01	15.7	0.0	2.5	7.9	0.0	3.0	2	1	0	2	2	2	0	Bacterial	dnaA	protein
NTPase_1	PF03266.15	gi|298674999|ref|YP_003726749.1|	-	0.01	15.8	0.0	10	6.0	0.0	3.3	3	0	0	3	3	2	0	NTPase
KAP_NTPase	PF07693.14	gi|298674999|ref|YP_003726749.1|	-	0.01	15.1	0.1	0.65	9.2	0.0	2.7	2	1	0	2	2	2	0	KAP	family	P-loop	domain
AFG1_ATPase	PF03969.16	gi|298674999|ref|YP_003726749.1|	-	0.012	14.5	0.0	0.89	8.4	0.0	2.4	2	0	0	2	2	2	0	AFG1-like	ATPase
ResIII	PF04851.15	gi|298674999|ref|YP_003726749.1|	-	0.013	15.6	0.0	7.3	6.6	0.0	2.4	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Cytidylate_kin	PF02224.18	gi|298674999|ref|YP_003726749.1|	-	0.018	14.8	0.1	6.2	6.5	0.0	2.4	2	0	0	2	2	2	0	Cytidylate	kinase
Guanylate_kin	PF00625.21	gi|298674999|ref|YP_003726749.1|	-	0.022	14.5	0.1	16	5.1	0.0	4.1	2	2	2	4	4	4	0	Guanylate	kinase
TniB	PF05621.11	gi|298674999|ref|YP_003726749.1|	-	0.023	14.1	0.0	3.8	6.9	0.0	3.2	4	0	0	4	4	4	0	Bacterial	TniB	protein
UFD1	PF03152.14	gi|298674999|ref|YP_003726749.1|	-	0.033	13.7	0.0	0.1	12.1	0.0	1.9	1	1	0	1	1	1	0	Ubiquitin	fusion	degradation	protein	UFD1
PduV-EutP	PF10662.9	gi|298674999|ref|YP_003726749.1|	-	0.039	13.7	0.0	4.7	6.9	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
T2SSE	PF00437.20	gi|298674999|ref|YP_003726749.1|	-	0.05	12.7	0.0	9.9	5.1	0.0	2.8	3	0	0	3	3	2	0	Type	II/IV	secretion	system	protein
CPT	PF07931.12	gi|298674999|ref|YP_003726749.1|	-	0.067	13.0	0.0	10	5.9	0.0	2.4	2	0	0	2	2	2	0	Chloramphenicol	phosphotransferase-like	protein
cobW	PF02492.19	gi|298674999|ref|YP_003726749.1|	-	0.076	12.6	0.0	15	5.1	0.0	2.4	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
SKI	PF01202.22	gi|298674999|ref|YP_003726749.1|	-	0.13	12.4	0.1	29	4.8	0.0	2.8	3	0	0	3	3	2	0	Shikimate	kinase
Viral_helicase1	PF01443.18	gi|298674999|ref|YP_003726749.1|	-	0.13	12.0	0.0	16	5.2	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
MtmB	PF05369.12	gi|298675000|ref|YP_003726750.1|	-	6.7e-225	747.0	0.7	7.5e-225	746.8	0.7	1.0	1	0	0	1	1	1	1	Monomethylamine	methyltransferase	MtmB
B12-binding_2	PF02607.17	gi|298675001|ref|YP_003726751.1|	-	1.9e-23	82.7	0.1	3.9e-23	81.7	0.1	1.5	1	0	0	1	1	1	1	B12	binding	domain
B12-binding	PF02310.19	gi|298675001|ref|YP_003726751.1|	-	1.4e-17	63.8	0.4	2.6e-17	63.0	0.4	1.4	1	0	0	1	1	1	1	B12	binding	domain
MFS_1	PF07690.16	gi|298675002|ref|YP_003726752.1|	-	7e-35	120.6	74.4	1.3e-27	96.6	40.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|298675002|ref|YP_003726752.1|	-	0.98	8.2	21.7	0.036	12.9	11.9	2.2	1	1	1	2	2	2	0	MFS_1	like	family
DUF5089	PF17002.5	gi|298675003|ref|YP_003726753.1|	-	0.039	13.8	0.2	0.075	12.9	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5089)
Phage_Orf51	PF06194.11	gi|298675003|ref|YP_003726753.1|	-	0.12	12.4	2.3	5.9	7.0	0.1	2.7	3	0	0	3	3	3	0	Phage	Conserved	Open	Reading	Frame	51
DUF2551	PF10826.8	gi|298675004|ref|YP_003726754.1|	-	3.3e-34	117.0	1.5	4.1e-34	116.7	1.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2551)
Penicillinase_R	PF03965.16	gi|298675004|ref|YP_003726754.1|	-	0.0084	16.5	0.1	0.015	15.7	0.1	1.5	1	1	0	1	1	1	1	Penicillinase	repressor
Ribosomal_L12_N	PF16320.5	gi|298675004|ref|YP_003726754.1|	-	0.062	13.0	0.0	0.12	12.1	0.0	1.6	1	0	0	1	1	1	0	Ribosomal	protein	L7/L12	dimerisation	domain
Imm6	PF14434.6	gi|298675004|ref|YP_003726754.1|	-	0.076	12.9	0.7	0.19	11.7	0.5	1.9	1	1	0	1	1	1	0	Immunity	protein	Imm6
TrmB	PF01978.19	gi|298675005|ref|YP_003726755.1|	-	0.0099	15.7	0.0	0.018	14.9	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
B-block_TFIIIC	PF04182.12	gi|298675005|ref|YP_003726755.1|	-	0.16	12.1	0.0	0.27	11.4	0.0	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
ATPase	PF06745.13	gi|298675006|ref|YP_003726756.1|	-	1.4e-45	155.4	0.2	1.7e-45	155.2	0.2	1.0	1	0	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|298675006|ref|YP_003726756.1|	-	2.9e-06	26.2	0.1	4.5e-06	25.6	0.1	1.2	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
DnaB_C	PF03796.15	gi|298675006|ref|YP_003726756.1|	-	3.9e-05	23.1	0.0	5.1e-05	22.7	0.0	1.4	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
RecA	PF00154.21	gi|298675006|ref|YP_003726756.1|	-	0.00017	21.2	0.0	0.00024	20.7	0.0	1.3	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
IstB_IS21	PF01695.17	gi|298675006|ref|YP_003726756.1|	-	0.0018	18.1	0.1	0.0054	16.5	0.0	1.8	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_24	PF13479.6	gi|298675006|ref|YP_003726756.1|	-	0.0066	16.2	0.4	0.013	15.2	0.4	1.5	1	1	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.15	gi|298675006|ref|YP_003726756.1|	-	0.009	15.9	0.7	0.033	14.1	0.7	1.9	1	1	0	1	1	1	1	NTPase
DUF2075	PF09848.9	gi|298675006|ref|YP_003726756.1|	-	0.0098	15.2	0.0	0.011	15.1	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
T2SSE	PF00437.20	gi|298675006|ref|YP_003726756.1|	-	0.011	14.8	0.0	0.016	14.2	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_22	PF13401.6	gi|298675006|ref|YP_003726756.1|	-	0.014	15.7	0.2	0.04	14.2	0.1	1.8	1	1	0	2	2	2	0	AAA	domain
AAA_25	PF13481.6	gi|298675006|ref|YP_003726756.1|	-	0.017	14.7	0.1	0.028	14.0	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
Ras	PF00071.22	gi|298675006|ref|YP_003726756.1|	-	0.023	14.3	0.4	0.08	12.5	0.0	2.1	2	1	1	3	3	3	0	Ras	family
Rad51	PF08423.11	gi|298675006|ref|YP_003726756.1|	-	0.031	13.5	1.2	0.04	13.2	1.2	1.5	1	1	0	1	1	1	0	Rad51
ResIII	PF04851.15	gi|298675006|ref|YP_003726756.1|	-	0.035	14.1	0.0	0.059	13.4	0.0	1.4	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_14	PF13173.6	gi|298675006|ref|YP_003726756.1|	-	0.077	13.0	0.1	0.33	11.0	0.0	2.0	1	1	1	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|298675006|ref|YP_003726756.1|	-	0.16	12.4	0.0	0.2	12.0	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
TrwB_AAD_bind	PF10412.9	gi|298675006|ref|YP_003726756.1|	-	0.23	10.4	0.3	0.36	9.7	0.3	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
TM_helix	PF05552.12	gi|298675007|ref|YP_003726757.1|	-	7.4e-26	89.9	17.3	5.5e-12	45.5	1.0	5.4	6	1	1	7	7	7	3	Conserved	TM	helix
ETRAMP	PF09716.10	gi|298675008|ref|YP_003726758.1|	-	0.19	11.8	6.0	0.44	10.6	0.1	2.1	1	1	1	2	2	2	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Gram_pos_anchor	PF00746.21	gi|298675008|ref|YP_003726758.1|	-	0.86	9.6	3.6	4.7	7.2	0.3	2.2	2	0	0	2	2	2	0	LPXTG	cell	wall	anchor	motif
LapA_dom	PF06305.11	gi|298675008|ref|YP_003726758.1|	-	5.5	6.9	10.1	0.26	11.1	1.4	2.0	1	1	1	2	2	2	0	Lipopolysaccharide	assembly	protein	A	domain
OrfB_Zn_ribbon	PF07282.11	gi|298675009|ref|YP_003726759.1|	-	7.6e-23	80.2	0.3	3.3e-22	78.2	0.0	2.3	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675009|ref|YP_003726759.1|	-	8.2e-05	22.8	0.7	0.00019	21.7	0.7	1.5	1	0	0	1	1	1	1	Probable	transposase
HypA	PF01155.19	gi|298675009|ref|YP_003726759.1|	-	0.017	15.1	4.6	0.16	12.0	0.4	3.0	3	1	0	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn_Tnp_IS1595	PF12760.7	gi|298675009|ref|YP_003726759.1|	-	0.069	13.1	0.2	0.069	13.1	0.2	2.3	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
UPF0547	PF10571.9	gi|298675009|ref|YP_003726759.1|	-	0.071	13.2	5.4	0.29	11.3	1.3	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
FAM76	PF16046.5	gi|298675009|ref|YP_003726759.1|	-	0.074	12.4	0.2	0.074	12.4	0.2	2.7	2	1	0	2	2	2	0	FAM76	protein
Zn_ribbon_17	PF17120.5	gi|298675009|ref|YP_003726759.1|	-	0.078	12.6	1.0	0.16	11.6	1.0	1.5	1	0	0	1	1	1	0	Zinc-ribbon,	C4HC2	type
Mu-like_Com	PF10122.9	gi|298675009|ref|YP_003726759.1|	-	0.13	11.8	2.8	1	8.9	2.9	2.3	1	1	0	1	1	1	0	Mu-like	prophage	protein	Com
DZR	PF12773.7	gi|298675009|ref|YP_003726759.1|	-	0.64	10.1	3.0	1.5	8.9	3.0	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|298675009|ref|YP_003726759.1|	-	3.2	7.6	7.0	3.4	7.5	0.8	3.0	3	0	0	3	3	3	0	zinc-ribbon	domain
DUF21	PF01595.20	gi|298675010|ref|YP_003726760.1|	-	7.3e-37	126.8	3.2	1e-36	126.3	3.2	1.1	1	0	0	1	1	1	1	Cyclin	M	transmembrane	N-terminal	domain
Par3_HAL_N_term	PF12053.8	gi|298675010|ref|YP_003726760.1|	-	0.065	13.5	0.6	2.3	8.5	0.2	2.4	1	1	1	2	2	2	0	N-terminal	of	Par3	and	HAL	proteins
PPDK_N	PF01326.19	gi|298675011|ref|YP_003726761.1|	-	4.9e-116	387.6	0.0	6.9e-116	387.1	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.18	gi|298675011|ref|YP_003726761.1|	-	6.4e-55	186.3	0.0	1e-54	185.7	0.0	1.2	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.23	gi|298675011|ref|YP_003726761.1|	-	2.5e-21	75.1	0.4	6.4e-21	73.8	0.4	1.8	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Lactamase_B_2	PF12706.7	gi|298675012|ref|YP_003726762.1|	-	3.2e-23	82.3	0.0	3.7e-23	82.1	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|298675012|ref|YP_003726762.1|	-	4.3e-11	43.2	0.2	1.5e-10	41.4	0.2	1.7	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.6	gi|298675012|ref|YP_003726762.1|	-	4.9e-05	23.3	0.0	0.00014	21.8	0.0	1.7	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
URO-D	PF01208.17	gi|298675013|ref|YP_003726763.1|	-	1.6e-78	264.3	0.0	1.8e-78	264.1	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
CAGE1	PF15066.6	gi|298675013|ref|YP_003726763.1|	-	0.013	14.2	0.1	0.018	13.8	0.1	1.1	1	0	0	1	1	1	0	Cancer-associated	gene	protein	1	family
EF-hand_6	PF13405.6	gi|298675014|ref|YP_003726764.1|	-	0.0077	16.1	0.0	0.039	13.9	0.0	1.9	1	1	0	1	1	1	1	EF-hand	domain
EF-hand_7	PF13499.6	gi|298675014|ref|YP_003726764.1|	-	0.019	15.4	0.1	0.025	15.0	0.1	1.2	1	0	0	1	1	1	0	EF-hand	domain	pair
OrfB_IS605	PF01385.19	gi|298675015|ref|YP_003726765.1|	-	2.6e-22	79.3	0.0	5.1e-22	78.3	0.0	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675015|ref|YP_003726765.1|	-	2.3e-12	46.6	0.0	4.9e-12	45.6	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Glyco_hydro_97	PF10566.9	gi|298675015|ref|YP_003726765.1|	-	0.0002	20.7	0.1	0.0002	20.7	0.1	1.6	2	0	0	2	2	2	1	Glycoside	hydrolase	97
EAP30	PF04157.16	gi|298675015|ref|YP_003726765.1|	-	0.1	11.8	0.0	0.17	11.1	0.0	1.3	1	0	0	1	1	1	0	EAP30/Vps36	family
DUF1059	PF06348.11	gi|298675016|ref|YP_003726766.1|	-	5e-07	29.9	0.1	6.1e-07	29.6	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1059)
PLAC9	PF15205.6	gi|298675016|ref|YP_003726766.1|	-	0.019	15.3	0.2	0.025	15.0	0.2	1.2	1	0	0	1	1	1	0	Placenta-specific	protein	9
zf-C2H2_aberr	PF17017.5	gi|298675016|ref|YP_003726766.1|	-	0.034	14.3	0.0	0.039	14.1	0.0	1.1	1	0	0	1	1	1	0	Aberrant	zinc-finger
Spore_Cse60	PF10957.8	gi|298675016|ref|YP_003726766.1|	-	0.051	13.6	1.9	0.086	12.9	1.5	1.5	1	1	1	2	2	2	0	Sporulation	protein	Cse60
Sm_multidrug_ex	PF06695.11	gi|298675017|ref|YP_003726767.1|	-	2.6e-33	115.2	1.6	3.4e-33	114.8	1.6	1.2	1	0	0	1	1	1	1	Putative	small	multi-drug	export	protein
Cytochrome_CBB3	PF13442.6	gi|298675018|ref|YP_003726768.1|	-	1.3e-07	31.8	0.0	2.1e-07	31.2	0.0	1.3	1	0	0	1	1	1	1	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Cytochrom_C	PF00034.21	gi|298675018|ref|YP_003726768.1|	-	1.6e-07	32.3	0.0	2.7e-07	31.6	0.0	1.3	1	0	0	1	1	1	1	Cytochrome	c
Chordopox_A13L	PF05961.11	gi|298675018|ref|YP_003726768.1|	-	0.044	14.0	0.0	0.072	13.3	0.0	1.4	1	0	0	1	1	1	0	Chordopoxvirus	A13L	protein
Inhibitor_I29	PF08246.12	gi|298675019|ref|YP_003726769.1|	-	0.13	12.7	2.7	5.8	7.4	0.4	3.0	3	0	0	3	3	3	0	Cathepsin	propeptide	inhibitor	domain	(I29)
DUF92	PF01940.16	gi|298675020|ref|YP_003726770.1|	-	8.3e-56	189.0	14.2	8.3e-56	189.0	14.2	2.7	2	2	0	2	2	2	1	Integral	membrane	protein	DUF92
DUF5423	PF17461.2	gi|298675020|ref|YP_003726770.1|	-	0.16	10.8	0.3	0.33	9.8	0.3	1.5	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5423)
HATPase_c	PF02518.26	gi|298675021|ref|YP_003726771.1|	-	1.8e-31	108.9	0.7	2.9e-31	108.3	0.2	1.6	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HisKA	PF00512.25	gi|298675021|ref|YP_003726771.1|	-	1.3e-21	76.4	0.6	2.9e-21	75.2	0.1	1.9	2	0	0	2	2	2	1	His	Kinase	A	(phospho-acceptor)	domain
PAS	PF00989.25	gi|298675021|ref|YP_003726771.1|	-	3.6e-12	46.3	0.0	7.3e-12	45.3	0.0	1.5	1	0	0	1	1	1	1	PAS	fold
PAS_9	PF13426.7	gi|298675021|ref|YP_003726771.1|	-	5.5e-11	42.6	0.0	1.1e-10	41.6	0.0	1.6	1	0	0	1	1	1	1	PAS	domain
PAS_8	PF13188.7	gi|298675021|ref|YP_003726771.1|	-	2.7e-06	27.3	0.0	5.7e-06	26.2	0.0	1.6	1	0	0	1	1	1	1	PAS	domain
HATPase_c_5	PF14501.6	gi|298675021|ref|YP_003726771.1|	-	0.0023	17.8	0.1	0.0062	16.4	0.1	1.8	1	0	0	1	1	1	1	GHKL	domain
HATPase_c_3	PF13589.6	gi|298675021|ref|YP_003726771.1|	-	0.0029	17.5	0.1	0.0094	15.8	0.0	2.0	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_3	PF08447.12	gi|298675021|ref|YP_003726771.1|	-	0.011	16.0	0.0	0.026	14.8	0.0	1.6	1	0	0	1	1	1	0	PAS	fold
PAS_4	PF08448.10	gi|298675021|ref|YP_003726771.1|	-	0.12	12.6	0.0	0.22	11.8	0.0	1.4	1	0	0	1	1	1	0	PAS	fold
DUF420	PF04238.12	gi|298675022|ref|YP_003726772.1|	-	1.2e-07	32.0	16.1	1.5e-07	31.8	16.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF420)
HTH_24	PF13412.6	gi|298675023|ref|YP_003726773.1|	-	7.3e-20	70.3	0.7	4.4e-09	35.8	0.0	2.9	3	0	0	3	3	3	2	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|298675023|ref|YP_003726773.1|	-	5.2e-07	29.5	0.0	0.046	13.6	0.0	2.3	2	0	0	2	2	2	2	MarR	family
TrmB	PF01978.19	gi|298675023|ref|YP_003726773.1|	-	4.4e-06	26.5	0.0	0.012	15.5	0.0	2.4	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|298675023|ref|YP_003726773.1|	-	0.00025	20.9	0.0	0.57	10.1	0.0	2.2	2	0	0	2	2	2	2	MarR	family
HTH_20	PF12840.7	gi|298675023|ref|YP_003726773.1|	-	0.0012	18.9	0.0	0.0023	18.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|298675023|ref|YP_003726773.1|	-	0.0014	18.5	0.0	0.022	14.6	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_Crp_2	PF13545.6	gi|298675023|ref|YP_003726773.1|	-	0.0031	17.4	0.0	0.46	10.5	0.0	2.2	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|298675023|ref|YP_003726773.1|	-	0.0064	16.3	0.0	0.73	9.7	0.0	2.3	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
FaeA	PF04703.12	gi|298675023|ref|YP_003726773.1|	-	0.075	13.4	0.0	0.21	12.0	0.0	1.7	1	0	0	1	1	1	0	FaeA-like	protein
DUF2140	PF09911.9	gi|298675025|ref|YP_003726775.1|	-	0.0067	16.0	1.6	0.011	15.3	1.6	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2140)
tRNA_anti-like	PF12869.7	gi|298675025|ref|YP_003726775.1|	-	0.022	14.4	0.6	0.028	14.0	0.6	1.2	1	0	0	1	1	1	0	tRNA_anti-like
SPC25	PF06703.11	gi|298675025|ref|YP_003726775.1|	-	0.077	12.8	1.6	0.13	12.0	1.6	1.3	1	0	0	1	1	1	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
DUF2963	PF11178.8	gi|298675025|ref|YP_003726775.1|	-	0.25	11.0	6.6	1.7	8.4	1.4	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2963)
Peptidase_C39_2	PF13529.6	gi|298675026|ref|YP_003726776.1|	-	4.9e-14	53.1	1.0	4.9e-14	53.1	1.0	2.2	2	1	2	4	4	4	1	Peptidase_C39	like	family
Inhibitor_I69	PF13734.6	gi|298675026|ref|YP_003726776.1|	-	0.026	14.9	0.2	0.076	13.4	0.2	1.8	1	0	0	1	1	1	0	Spi	protease	inhibitor
NosD	PF05048.13	gi|298675027|ref|YP_003726777.1|	-	1.9e-45	155.0	122.7	1.4e-19	70.3	35.2	3.1	1	1	2	3	3	3	3	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|298675027|ref|YP_003726777.1|	-	1.1e-36	126.1	135.7	9.1e-18	64.6	39.2	3.5	2	1	2	4	4	4	3	Right	handed	beta	helix	region
Ammonium_transp	PF00909.21	gi|298675028|ref|YP_003726778.1|	-	8.3e-125	416.6	38.1	1e-124	416.3	38.1	1.1	1	0	0	1	1	1	1	Ammonium	Transporter	Family
DUF373	PF04123.13	gi|298675028|ref|YP_003726778.1|	-	1.3	8.4	28.4	0.12	11.8	3.3	3.1	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF373)
P-II	PF00543.22	gi|298675029|ref|YP_003726779.1|	-	5.3e-39	132.9	2.1	6e-39	132.8	2.1	1.0	1	0	0	1	1	1	1	Nitrogen	regulatory	protein	P-II
Cupredoxin_1	PF13473.6	gi|298675030|ref|YP_003726780.1|	-	3.8e-13	49.4	0.1	4.7e-13	49.1	0.1	1.1	1	0	0	1	1	1	1	Cupredoxin-like	domain
Copper-bind	PF00127.20	gi|298675030|ref|YP_003726780.1|	-	6.8e-11	42.5	2.3	3.3e-09	37.1	2.3	2.1	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
DUF2190	PF09956.9	gi|298675030|ref|YP_003726780.1|	-	0.0077	16.7	1.4	0.01	16.3	0.6	1.5	1	1	1	2	2	2	1	Uncharacterized	conserved	protein	(DUF2190)
ATHILA	PF03078.15	gi|298675030|ref|YP_003726780.1|	-	0.17	10.6	0.4	0.22	10.3	0.4	1.1	1	0	0	1	1	1	0	ATHILA	ORF-1	family
AMP-binding	PF00501.28	gi|298675031|ref|YP_003726781.1|	-	2.9e-15	55.8	0.0	3.7e-15	55.4	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
SIS_2	PF13580.6	gi|298675031|ref|YP_003726781.1|	-	0.029	14.4	0.0	0.35	10.9	0.0	2.1	1	1	1	2	2	2	0	SIS	domain
DUF1478	PF07349.11	gi|298675031|ref|YP_003726781.1|	-	0.14	12.1	0.0	0.22	11.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1478)
Thioredox_DsbH	PF03190.15	gi|298675032|ref|YP_003726782.1|	-	2.6e-76	255.1	0.0	3.5e-75	251.4	0.0	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.6	gi|298675032|ref|YP_003726782.1|	-	4.1e-12	46.1	0.0	8.7e-12	45.1	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin-like
Glyco_hydro_9	PF00759.19	gi|298675032|ref|YP_003726782.1|	-	4.3e-06	26.4	0.3	6.5e-05	22.5	0.0	2.1	2	0	0	2	2	2	1	Glycosyl	hydrolase	family	9
Glyco_hydro_76	PF03663.14	gi|298675032|ref|YP_003726782.1|	-	5.5e-05	22.8	4.2	0.0031	17.1	0.1	2.8	2	1	0	2	2	2	2	Glycosyl	hydrolase	family	76
Glyco_hydro_88	PF07470.13	gi|298675032|ref|YP_003726782.1|	-	8.9e-05	21.7	2.5	0.046	12.8	0.1	2.5	2	0	0	2	2	2	2	Glycosyl	Hydrolase	Family	88
GlcNAc_2-epim	PF07221.11	gi|298675032|ref|YP_003726782.1|	-	0.00042	19.7	0.1	1.4	8.0	0.1	3.2	3	0	0	3	3	3	2	N-acylglucosamine	2-epimerase	(GlcNAc	2-epimerase)
LANC_like	PF05147.13	gi|298675032|ref|YP_003726782.1|	-	0.0035	16.0	2.2	12	4.4	0.0	4.5	3	1	1	5	5	5	1	Lanthionine	synthetase	C-like	protein
Thioredoxin_2	PF13098.6	gi|298675032|ref|YP_003726782.1|	-	0.036	14.5	0.0	0.099	13.1	0.0	1.8	1	0	0	1	1	1	0	Thioredoxin-like	domain
QueC	PF06508.13	gi|298675033|ref|YP_003726783.1|	-	5.4e-60	202.5	0.0	6.3e-60	202.3	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.20	gi|298675033|ref|YP_003726783.1|	-	1.9e-05	24.5	0.0	0.00051	19.8	0.0	2.1	2	0	0	2	2	2	1	PP-loop	family
ThiI	PF02568.14	gi|298675033|ref|YP_003726783.1|	-	0.0013	18.4	0.0	0.32	10.5	0.0	2.3	2	1	0	2	2	2	2	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.21	gi|298675033|ref|YP_003726783.1|	-	0.019	14.6	0.0	0.027	14.2	0.0	1.1	1	0	0	1	1	1	0	Asparagine	synthase
NAD_synthase	PF02540.17	gi|298675033|ref|YP_003726783.1|	-	0.026	13.6	0.0	0.035	13.2	0.0	1.2	1	0	0	1	1	1	0	NAD	synthase
Fer2	PF00111.27	gi|298675033|ref|YP_003726783.1|	-	0.031	14.2	0.1	0.083	12.9	0.1	1.7	2	0	0	2	2	2	0	2Fe-2S	iron-sulfur	cluster	binding	domain
tRNA_Me_trans	PF03054.16	gi|298675033|ref|YP_003726783.1|	-	0.039	12.8	0.0	0.06	12.1	0.0	1.3	1	0	0	1	1	1	0	tRNA	methyl	transferase
DUF366	PF04017.12	gi|298675034|ref|YP_003726784.1|	-	5e-71	238.0	6.1	5.6e-71	237.8	6.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF366)
Radical_SAM	PF04055.21	gi|298675035|ref|YP_003726785.1|	-	4.2e-10	40.3	1.3	8.3e-10	39.3	1.1	1.7	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|298675035|ref|YP_003726785.1|	-	1.4e-08	34.8	1.2	3.5e-08	33.6	0.8	2.0	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|298675035|ref|YP_003726785.1|	-	3.3e-07	30.7	0.1	1.2e-06	28.8	0.1	2.0	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
PTPS	PF01242.19	gi|298675036|ref|YP_003726786.1|	-	1.2e-28	99.5	0.0	1.4e-28	99.3	0.0	1.0	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
DUF5071	PF16804.5	gi|298675036|ref|YP_003726786.1|	-	0.077	13.3	0.1	0.094	13.0	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5071)
Radical_SAM	PF04055.21	gi|298675037|ref|YP_003726787.1|	-	5.1e-26	92.0	0.2	7.5e-26	91.5	0.2	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|298675037|ref|YP_003726787.1|	-	6.6e-07	29.5	0.1	1.6e-06	28.2	0.1	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|298675037|ref|YP_003726787.1|	-	6.3e-05	23.3	0.1	0.00012	22.4	0.1	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
AIRS	PF00586.24	gi|298675038|ref|YP_003726788.1|	-	1.6e-18	67.2	0.4	3.1e-18	66.2	0.4	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.22	gi|298675038|ref|YP_003726788.1|	-	2.9e-16	60.0	0.0	4.7e-16	59.3	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
OrfB_IS605	PF01385.19	gi|298675040|ref|YP_003726790.1|	-	1.5e-27	96.2	0.2	3e-27	95.2	0.2	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675040|ref|YP_003726790.1|	-	7.6e-22	77.0	0.6	1.9e-21	75.8	0.6	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298675040|ref|YP_003726790.1|	-	5.8e-09	35.3	0.1	1.4e-08	34.1	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zinc_ribbon_2	PF13240.6	gi|298675040|ref|YP_003726790.1|	-	0.0025	17.5	1.5	1	9.2	0.2	2.8	2	0	0	2	2	2	2	zinc-ribbon	domain
RuvC_1	PF18516.1	gi|298675040|ref|YP_003726790.1|	-	0.0044	16.2	1.4	0.0074	15.5	1.4	1.3	1	0	0	1	1	1	1	RuvC	nuclease	domain
Zn_Tnp_IS1595	PF12760.7	gi|298675040|ref|YP_003726790.1|	-	0.017	15.1	1.1	0.042	13.8	1.1	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|298675040|ref|YP_003726790.1|	-	0.037	13.6	0.2	10	5.7	0.0	2.6	2	0	0	2	2	2	0	TFIIB	zinc-binding
Nudix_N_2	PF14803.6	gi|298675040|ref|YP_003726790.1|	-	0.087	12.8	0.6	8.5	6.4	0.1	2.5	2	0	0	2	2	2	0	Nudix	N-terminal
zf-ribbon_3	PF13248.6	gi|298675040|ref|YP_003726790.1|	-	0.11	12.0	1.2	5.3	6.6	0.2	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.7	gi|298675040|ref|YP_003726790.1|	-	0.13	12.3	0.7	0.37	10.8	0.7	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-NADH-PPase	PF09297.11	gi|298675040|ref|YP_003726790.1|	-	4.1	7.2	5.8	49	3.7	5.8	2.3	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
TrmO	PF01980.16	gi|298675041|ref|YP_003726791.1|	-	1.3e-28	99.6	0.1	1.6e-28	99.3	0.1	1.1	1	0	0	1	1	1	1	tRNA-methyltransferase	O
DUF1724	PF08350.10	gi|298675042|ref|YP_003726792.1|	-	9.2e-20	70.5	0.2	1.9e-19	69.6	0.2	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1724)
HTH_45	PF14947.6	gi|298675042|ref|YP_003726792.1|	-	0.00085	19.3	2.0	0.0017	18.3	0.2	2.4	3	0	0	3	3	3	1	Winged	helix-turn-helix
MarR	PF01047.22	gi|298675042|ref|YP_003726792.1|	-	0.0069	16.3	0.2	0.021	14.8	0.1	1.8	2	0	0	2	2	2	1	MarR	family
HTH_5	PF01022.20	gi|298675042|ref|YP_003726792.1|	-	0.016	15.0	0.1	0.03	14.2	0.1	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.12	gi|298675042|ref|YP_003726792.1|	-	0.035	14.0	0.1	0.081	12.9	0.1	1.7	1	0	0	1	1	1	0	HTH	domain
WAPL	PF07814.13	gi|298675042|ref|YP_003726792.1|	-	0.036	12.9	0.0	0.064	12.0	0.0	1.3	1	1	0	1	1	1	0	Wings	apart-like	protein	regulation	of	heterochromatin
HTH_34	PF13601.6	gi|298675042|ref|YP_003726792.1|	-	0.081	13.1	0.0	0.27	11.4	0.0	2.0	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Thg1	PF04446.12	gi|298675043|ref|YP_003726793.1|	-	3.7e-25	88.4	0.1	5.7e-25	87.8	0.1	1.3	1	0	0	1	1	1	1	tRNAHis	guanylyltransferase
Thg1C	PF14413.6	gi|298675043|ref|YP_003726793.1|	-	7e-10	39.1	1.0	1e-09	38.6	1.0	1.2	1	0	0	1	1	1	1	Thg1	C	terminal	domain
PRC	PF05239.16	gi|298675044|ref|YP_003726794.1|	-	1.1e-14	54.2	1.8	1.5e-14	53.8	1.8	1.1	1	0	0	1	1	1	1	PRC-barrel	domain
Ldh_1_N	PF00056.23	gi|298675045|ref|YP_003726795.1|	-	1.4e-39	135.4	0.4	2.2e-39	134.8	0.4	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.18	gi|298675045|ref|YP_003726795.1|	-	2.4e-30	105.6	0.0	4.1e-30	104.9	0.0	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.14	gi|298675045|ref|YP_003726795.1|	-	0.00045	19.9	1.8	0.002	17.7	1.7	2.0	1	1	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Glyco_hydro_4	PF02056.16	gi|298675045|ref|YP_003726795.1|	-	0.0022	17.6	0.7	0.013	15.1	0.1	2.5	3	0	0	3	3	3	1	Family	4	glycosyl	hydrolase
3Beta_HSD	PF01073.19	gi|298675045|ref|YP_003726795.1|	-	0.0048	15.9	0.1	0.0087	15.1	0.1	1.4	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
F420_oxidored	PF03807.17	gi|298675045|ref|YP_003726795.1|	-	0.064	13.8	0.2	0.46	11.1	0.0	2.2	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
ThiF	PF00899.21	gi|298675045|ref|YP_003726795.1|	-	0.12	11.7	0.2	0.23	10.8	0.2	1.4	1	0	0	1	1	1	0	ThiF	family
DHNA	PF04038.12	gi|298675046|ref|YP_003726796.1|	-	1.5e-42	144.5	0.0	1.7e-42	144.3	0.0	1.0	1	0	0	1	1	1	1	Dihydroneopterin	aldolase
CDP-OH_P_transf	PF01066.21	gi|298675047|ref|YP_003726797.1|	-	1.4e-11	45.0	0.4	1.4e-11	45.0	0.4	3.5	3	1	0	3	3	3	1	CDP-alcohol	phosphatidyltransferase
DUF4267	PF14087.6	gi|298675047|ref|YP_003726797.1|	-	0.037	14.1	1.9	0.31	11.1	0.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4267)
ABC2_membrane_5	PF13346.6	gi|298675047|ref|YP_003726797.1|	-	5.7	6.4	29.9	0.85	9.1	25.2	2.0	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
PS_Dcarbxylase	PF02666.15	gi|298675048|ref|YP_003726798.1|	-	9.5e-27	93.9	0.3	3.4e-21	75.7	0.0	2.1	1	1	1	2	2	2	2	Phosphatidylserine	decarboxylase
Peptidase_M23	PF01551.22	gi|298675048|ref|YP_003726798.1|	-	0.075	13.2	0.1	1.5	9.1	0.1	2.6	2	1	0	2	2	2	0	Peptidase	family	M23
Exosortase_EpsH	PF09721.10	gi|298675049|ref|YP_003726799.1|	-	1.8e-11	44.0	18.1	2.6e-11	43.6	18.1	1.2	1	0	0	1	1	1	1	Transmembrane	exosortase	(Exosortase_EpsH)
DSX_dimer	PF08828.10	gi|298675049|ref|YP_003726799.1|	-	0.26	11.0	0.5	0.88	9.3	0.1	2.0	2	0	0	2	2	2	0	Doublesex	dimerisation	domain
NUDIX	PF00293.28	gi|298675050|ref|YP_003726800.1|	-	9.1e-20	71.0	0.0	1e-19	70.8	0.0	1.0	1	0	0	1	1	1	1	NUDIX	domain
DUF4916	PF16262.5	gi|298675050|ref|YP_003726800.1|	-	0.034	13.6	0.0	0.13	11.8	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4916)
TFIIS_C	PF01096.18	gi|298675051|ref|YP_003726801.1|	-	1e-17	63.7	17.2	1.1e-17	63.6	5.1	3.1	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.16	gi|298675051|ref|YP_003726801.1|	-	2.7e-07	30.4	11.7	1.7e-06	27.8	2.4	3.2	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
zinc_ribbon_2	PF13240.6	gi|298675051|ref|YP_003726801.1|	-	3.7e-05	23.3	11.5	2	8.2	0.2	4.1	4	0	0	4	4	4	2	zinc-ribbon	domain
TackOD1	PF18551.1	gi|298675051|ref|YP_003726801.1|	-	6e-05	22.8	7.7	0.00012	21.8	3.4	2.3	1	1	1	2	2	2	1	Thaumarchaeal	output	domain	1
zinc_ribbon_4	PF13717.6	gi|298675051|ref|YP_003726801.1|	-	0.00058	19.7	15.6	0.35	10.8	0.7	4.1	4	0	0	4	4	4	2	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|298675051|ref|YP_003726801.1|	-	0.0019	18.3	9.1	0.42	10.8	2.6	3.9	3	1	0	3	3	3	1	Zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|298675051|ref|YP_003726801.1|	-	0.0022	17.9	12.2	0.014	15.3	2.1	2.7	2	2	0	2	2	2	2	Putative	transposase	DNA-binding	domain
DNA_RNApol_7kD	PF03604.13	gi|298675051|ref|YP_003726801.1|	-	0.0022	17.6	9.9	0.52	10.0	0.0	3.4	3	1	0	3	3	3	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
GFA	PF04828.14	gi|298675051|ref|YP_003726801.1|	-	0.003	17.9	0.7	0.003	17.9	0.7	2.9	1	1	2	3	3	3	1	Glutathione-dependent	formaldehyde-activating	enzyme
Nudix_N_2	PF14803.6	gi|298675051|ref|YP_003726801.1|	-	0.0042	17.0	9.0	0.077	12.9	0.3	3.7	3	1	0	3	3	3	1	Nudix	N-terminal
zf-ACC	PF17848.1	gi|298675051|ref|YP_003726801.1|	-	0.0079	16.2	15.8	1.8	8.7	0.4	4.2	4	0	0	4	4	4	1	Acetyl-coA	carboxylase	zinc	finger	domain
DZR	PF12773.7	gi|298675051|ref|YP_003726801.1|	-	0.012	15.7	10.8	0.22	11.6	1.0	2.9	2	1	0	2	2	2	0	Double	zinc	ribbon
zf-AN1	PF01428.16	gi|298675051|ref|YP_003726801.1|	-	0.023	14.9	9.3	3.2	8.0	2.6	3.2	3	0	0	3	3	3	0	AN1-like	Zinc	finger
FYVE	PF01363.21	gi|298675051|ref|YP_003726801.1|	-	0.04	14.1	8.9	0.6	10.3	8.9	2.3	1	1	0	1	1	1	0	FYVE	zinc	finger
zf-ribbon_3	PF13248.6	gi|298675051|ref|YP_003726801.1|	-	0.042	13.3	14.1	0.19	11.2	3.7	3.6	3	1	0	3	3	3	0	zinc-ribbon	domain
zinc-ribbons_6	PF07191.12	gi|298675051|ref|YP_003726801.1|	-	0.055	13.5	9.0	33	4.5	9.0	2.5	1	1	0	1	1	1	0	zinc-ribbons
DUF3268	PF11672.8	gi|298675051|ref|YP_003726801.1|	-	0.064	13.6	0.4	0.064	13.6	0.4	2.1	3	0	0	3	3	2	0	zinc-finger-containing	domain
zinc-ribbon_6	PF10005.9	gi|298675051|ref|YP_003726801.1|	-	0.076	13.7	6.2	2.9	8.7	0.2	2.8	1	1	2	3	3	3	0	zinc-ribbon	domain
zf_UBZ	PF18439.1	gi|298675051|ref|YP_003726801.1|	-	0.099	12.3	9.4	5.5	6.7	0.0	4.0	4	0	0	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
TF_Zn_Ribbon	PF08271.12	gi|298675051|ref|YP_003726801.1|	-	0.11	12.0	12.1	0.67	9.5	1.1	3.5	2	2	1	3	3	3	0	TFIIB	zinc-binding
UCH_1	PF13423.6	gi|298675051|ref|YP_003726801.1|	-	0.12	12.0	1.3	0.088	12.4	0.4	1.3	1	1	0	1	1	1	0	Ubiquitin	carboxyl-terminal	hydrolase
IBR	PF01485.21	gi|298675051|ref|YP_003726801.1|	-	0.14	12.4	13.1	0.2	11.9	2.2	3.0	2	1	0	2	2	2	0	IBR	domain,	a	half	RING-finger	domain
DUF951	PF06107.11	gi|298675051|ref|YP_003726801.1|	-	0.32	10.9	4.1	20	5.2	0.0	3.2	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF951)
HalOD2	PF18547.1	gi|298675051|ref|YP_003726801.1|	-	0.34	10.8	11.7	3.1	7.8	0.1	3.6	4	0	0	4	4	3	0	Halobacterial	output	domain	2
Ribosomal_S27e	PF01667.17	gi|298675051|ref|YP_003726801.1|	-	0.49	10.1	9.4	6	6.7	0.1	3.5	3	1	0	3	3	3	0	Ribosomal	protein	S27
Rpr2	PF04032.16	gi|298675051|ref|YP_003726801.1|	-	0.51	10.7	8.5	7.5	6.9	3.8	2.9	1	1	1	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
HypA	PF01155.19	gi|298675051|ref|YP_003726801.1|	-	0.61	10.1	10.7	9.3	6.3	5.5	2.7	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
UPF0547	PF10571.9	gi|298675051|ref|YP_003726801.1|	-	0.62	10.2	11.6	8.4	6.6	0.1	3.9	4	0	0	4	4	4	0	Uncharacterised	protein	family	UPF0547
DUF35_N	PF12172.8	gi|298675051|ref|YP_003726801.1|	-	0.86	9.5	11.1	22	5.0	0.2	4.1	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
ADK_lid	PF05191.14	gi|298675051|ref|YP_003726801.1|	-	0.91	9.6	13.8	9	6.4	0.1	3.8	3	1	0	3	3	3	0	Adenylate	kinase,	active	site	lid
HscB_4_cys	PF18256.1	gi|298675051|ref|YP_003726801.1|	-	1.2	9.0	12.5	9	6.2	0.2	4.0	4	0	0	4	4	4	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
zinc_ribbon_15	PF17032.5	gi|298675051|ref|YP_003726801.1|	-	1.2	9.9	11.6	0.34	11.7	1.3	3.0	2	1	0	3	3	3	0	zinc-ribbon	family
zf-LITAF-like	PF10601.9	gi|298675051|ref|YP_003726801.1|	-	1.4	9.3	11.0	5	7.5	0.1	4.0	3	1	1	4	4	4	0	LITAF-like	zinc	ribbon	domain
zf-Mss51	PF13824.6	gi|298675051|ref|YP_003726801.1|	-	1.6	8.9	9.4	3.5	7.8	0.3	3.1	2	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Desulfoferrod_N	PF06397.12	gi|298675051|ref|YP_003726801.1|	-	1.7	8.3	9.2	9.8	5.9	0.1	3.5	4	0	0	4	4	3	0	Desulfoferrodoxin,	N-terminal	domain
zf-C2H2_11	PF16622.5	gi|298675051|ref|YP_003726801.1|	-	1.9	8.3	13.4	2.1	8.2	0.1	3.5	4	0	0	4	4	3	0	zinc-finger	C2H2-type
zf-3CxxC_2	PF17180.4	gi|298675051|ref|YP_003726801.1|	-	3.3	8.5	15.6	7	7.5	0.1	3.7	2	2	2	4	4	4	0	Zinc-binding	domain
Rubredoxin_2	PF18073.1	gi|298675051|ref|YP_003726801.1|	-	4.6	7.1	20.4	1.6	8.5	1.8	4.2	4	0	0	4	4	4	0	Rubredoxin	metal	binding	domain
DiS_P_DiS	PF06750.13	gi|298675051|ref|YP_003726801.1|	-	6	7.1	0.0	6	7.1	0.0	3.3	3	1	0	3	3	3	0	Bacterial	Peptidase	A24	N-terminal	domain
Zn_Tnp_IS1595	PF12760.7	gi|298675051|ref|YP_003726801.1|	-	6.8	6.8	17.2	1.4	8.9	4.0	3.0	2	2	1	3	3	3	0	Transposase	zinc-ribbon	domain
Ogr_Delta	PF04606.12	gi|298675051|ref|YP_003726801.1|	-	7	6.7	10.1	0.66	10.0	0.7	2.8	3	0	0	3	3	2	0	Ogr/Delta-like	zinc	finger
A2L_zn_ribbon	PF08792.10	gi|298675051|ref|YP_003726801.1|	-	7.8	6.3	14.2	29	4.5	0.0	4.1	4	0	0	4	4	4	0	A2L	zinc	ribbon	domain
PCNA_N	PF00705.18	gi|298675052|ref|YP_003726802.1|	-	4.8e-13	48.9	2.1	2.3e-12	46.7	0.4	2.3	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.15	gi|298675052|ref|YP_003726802.1|	-	4.2e-10	39.9	0.0	4.4e-08	33.3	0.0	2.8	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad9	PF04139.13	gi|298675052|ref|YP_003726802.1|	-	0.0052	16.3	0.0	0.023	14.2	0.0	1.9	2	0	0	2	2	2	1	Rad9
DNA_pol3_beta	PF00712.19	gi|298675052|ref|YP_003726802.1|	-	0.035	14.2	0.6	0.16	12.1	0.2	2.1	2	0	0	2	2	2	0	DNA	polymerase	III	beta	subunit,	N-terminal	domain
Rad1	PF02144.16	gi|298675052|ref|YP_003726802.1|	-	0.073	12.1	0.0	1.7	7.6	0.0	2.1	1	1	1	2	2	2	0	Repair	protein	Rad1/Rec1/Rad17
DNA_primase_lrg	PF04104.14	gi|298675053|ref|YP_003726803.1|	-	9e-37	126.9	0.6	5.1e-36	124.4	0.6	1.8	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
DUF4883	PF16224.5	gi|298675053|ref|YP_003726803.1|	-	0.0057	16.9	0.1	0.0057	16.9	0.1	2.8	3	0	0	3	3	3	1	DOmain	of	unknown	function	(DUF4883)
TFIID_20kDa	PF03847.13	gi|298675053|ref|YP_003726803.1|	-	0.046	14.2	0.2	0.2	12.2	0.1	2.1	2	0	0	2	2	2	0	Transcription	initiation	factor	TFIID	subunit	A
Skp1	PF01466.19	gi|298675053|ref|YP_003726803.1|	-	0.046	13.8	0.0	0.19	11.9	0.0	2.1	1	0	0	1	1	1	0	Skp1	family,	dimerisation	domain
Mut7-C	PF01927.16	gi|298675053|ref|YP_003726803.1|	-	0.058	13.5	0.1	0.26	11.4	0.1	2.0	2	0	0	2	2	2	0	Mut7-C	RNAse	domain
GATase_3	PF07685.14	gi|298675054|ref|YP_003726804.1|	-	1.1e-33	116.4	0.1	1.7e-33	115.9	0.1	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
AAA_26	PF13500.6	gi|298675054|ref|YP_003726804.1|	-	7.8e-21	74.8	2.4	1e-18	67.9	3.3	2.5	2	1	0	2	2	2	1	AAA	domain
CbiA	PF01656.23	gi|298675054|ref|YP_003726804.1|	-	1.2e-19	70.7	0.1	2e-19	69.9	0.1	1.4	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|298675054|ref|YP_003726804.1|	-	0.024	14.5	0.0	0.074	13.0	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
DUF1611	PF07755.11	gi|298675054|ref|YP_003726804.1|	-	0.056	12.7	0.1	0.17	11.1	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
Peptidase_S51	PF03575.17	gi|298675054|ref|YP_003726804.1|	-	0.058	13.0	0.0	0.099	12.3	0.0	1.3	1	0	0	1	1	1	0	Peptidase	family	S51
NTPase_1	PF03266.15	gi|298675054|ref|YP_003726804.1|	-	0.095	12.6	0.6	1	9.2	0.1	2.4	3	0	0	3	3	3	0	NTPase
GATase	PF00117.28	gi|298675054|ref|YP_003726804.1|	-	0.11	12.2	0.0	0.24	11.1	0.0	1.5	1	0	0	1	1	1	0	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|298675054|ref|YP_003726804.1|	-	0.15	11.9	0.0	0.33	10.8	0.0	1.5	1	0	0	1	1	1	0	SNO	glutamine	amidotransferase	family
Radical_SAM	PF04055.21	gi|298675055|ref|YP_003726805.1|	-	4.2e-31	108.6	0.1	8.6e-31	107.6	0.0	1.5	2	0	0	2	2	2	1	Radical	SAM	superfamily
Mob_synth_C	PF06463.13	gi|298675055|ref|YP_003726805.1|	-	8.8e-20	70.9	0.2	1.5e-19	70.2	0.2	1.4	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Fer4_14	PF13394.6	gi|298675055|ref|YP_003726805.1|	-	4.4e-08	33.3	0.1	1.1e-07	32.0	0.1	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|298675055|ref|YP_003726805.1|	-	6.2e-07	29.8	0.0	1.4e-06	28.6	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
HIPIP	PF01355.17	gi|298675055|ref|YP_003726805.1|	-	0.062	13.7	0.0	0.13	12.6	0.0	1.5	1	0	0	1	1	1	0	High	potential	iron-sulfur	protein
SurE	PF01975.17	gi|298675057|ref|YP_003726807.1|	-	5.8e-53	179.6	0.0	7e-53	179.3	0.0	1.1	1	0	0	1	1	1	1	Survival	protein	SurE
SIL1	PF16782.5	gi|298675057|ref|YP_003726807.1|	-	0.081	12.1	0.1	0.11	11.7	0.1	1.2	1	0	0	1	1	1	0	Nucleotide	exchange	factor	SIL1
Methyltransf_21	PF05050.12	gi|298675058|ref|YP_003726808.1|	-	1.2e-08	35.1	0.1	1.8e-07	31.3	0.1	2.1	1	1	0	1	1	1	1	Methyltransferase	FkbM	domain
Methyltransf_22	PF13383.6	gi|298675058|ref|YP_003726808.1|	-	0.00018	21.2	0.0	0.00026	20.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.16	gi|298675058|ref|YP_003726808.1|	-	0.00087	19.1	0.1	0.0035	17.1	0.0	2.0	2	1	0	2	2	2	1	Met-10+	like-protein
DREV	PF05219.12	gi|298675058|ref|YP_003726808.1|	-	0.001	18.2	0.0	0.0017	17.5	0.0	1.4	1	0	0	1	1	1	1	DREV	methyltransferase
Methyltransf_23	PF13489.6	gi|298675058|ref|YP_003726808.1|	-	0.029	14.2	0.0	0.035	14.0	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
RrnaAD	PF00398.20	gi|298675058|ref|YP_003726808.1|	-	0.043	12.9	0.0	0.055	12.5	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
AhpC-TSA	PF00578.21	gi|298675059|ref|YP_003726809.1|	-	6e-30	103.7	0.0	8.5e-30	103.2	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|298675059|ref|YP_003726809.1|	-	7.8e-11	41.9	0.0	4.5e-10	39.4	0.0	2.0	1	1	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.9	gi|298675059|ref|YP_003726809.1|	-	5.9e-10	38.8	0.0	1.3e-09	37.8	0.0	1.6	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
GLTT	PF01744.20	gi|298675060|ref|YP_003726810.1|	-	1.7e-06	27.6	3.8	0.0081	15.9	0.1	3.0	3	1	0	4	4	4	2	GLTT	repeat	(6	copies)
Pentapeptide_2	PF01469.18	gi|298675060|ref|YP_003726810.1|	-	0.0034	17.2	7.6	0.022	14.7	4.8	2.2	1	1	1	2	2	2	2	Pentapeptide	repeats	(8	copies)
Peptidase_U32	PF01136.19	gi|298675061|ref|YP_003726811.1|	-	1.6e-83	279.4	0.0	2.1e-83	279.1	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	U32
GTP_EFTU_D2	PF03144.25	gi|298675061|ref|YP_003726811.1|	-	0.032	14.6	0.4	0.076	13.4	0.4	1.6	1	0	0	1	1	1	0	Elongation	factor	Tu	domain	2
RGS	PF00615.19	gi|298675061|ref|YP_003726811.1|	-	0.12	12.7	0.0	0.24	11.7	0.0	1.5	1	0	0	1	1	1	0	Regulator	of	G	protein	signaling	domain
DsbD	PF02683.15	gi|298675062|ref|YP_003726812.1|	-	1.3e-14	54.6	13.7	2.2e-14	53.9	13.7	1.3	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
Thioredoxin_3	PF13192.6	gi|298675062|ref|YP_003726812.1|	-	4.9e-10	39.3	0.5	9.5e-10	38.4	0.5	1.4	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin	PF00085.20	gi|298675062|ref|YP_003726812.1|	-	4.4e-07	29.8	0.1	7.8e-07	29.0	0.1	1.4	1	0	0	1	1	1	1	Thioredoxin
DsbD_2	PF13386.6	gi|298675062|ref|YP_003726812.1|	-	5.6e-07	29.7	12.8	1.3e-06	28.5	12.8	1.7	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
DUF2231	PF09990.9	gi|298675062|ref|YP_003726812.1|	-	0.014	15.8	1.4	0.35	11.3	0.1	2.9	2	1	0	2	2	2	0	Predicted	membrane	protein	(DUF2231)
DUF1772	PF08592.11	gi|298675062|ref|YP_003726812.1|	-	0.02	15.2	2.8	1.6	9.0	0.2	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1772)
Glutaredoxin	PF00462.24	gi|298675062|ref|YP_003726812.1|	-	0.02	15.1	0.1	0.041	14.1	0.1	1.5	1	0	0	1	1	1	0	Glutaredoxin
TraF	PF13728.6	gi|298675062|ref|YP_003726812.1|	-	0.11	12.4	0.1	0.34	10.7	0.1	1.7	1	1	0	1	1	1	0	F	plasmid	transfer	operon	protein
Thioredoxin_2	PF13098.6	gi|298675062|ref|YP_003726812.1|	-	0.12	12.8	0.3	0.4	11.1	0.3	1.8	1	1	0	1	1	1	0	Thioredoxin-like	domain
DUF769	PF05590.11	gi|298675063|ref|YP_003726813.1|	-	0.097	12.1	0.0	0.12	11.9	0.0	1.2	1	0	0	1	1	1	0	Xylella	fastidiosa	protein	of	unknown	function	(DUF769)
FAD_binding_7	PF03441.14	gi|298675064|ref|YP_003726814.1|	-	3.5e-73	245.4	2.4	5.8e-73	244.7	2.4	1.3	1	0	0	1	1	1	1	FAD	binding	domain	of	DNA	photolyase
DNA_photolyase	PF00875.18	gi|298675064|ref|YP_003726814.1|	-	2e-44	151.5	0.0	3.6e-44	150.6	0.0	1.4	1	0	0	1	1	1	1	DNA	photolyase
DEAD	PF00270.29	gi|298675065|ref|YP_003726815.1|	-	3.6e-27	95.2	0.0	1.2e-26	93.6	0.0	1.8	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DUF1998	PF09369.10	gi|298675065|ref|YP_003726815.1|	-	9.9e-17	61.5	0.0	2.3e-16	60.3	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1998)
Helicase_C	PF00271.31	gi|298675065|ref|YP_003726815.1|	-	2.5e-15	56.8	0.1	1.6e-14	54.2	0.0	2.4	2	1	0	2	2	2	1	Helicase	conserved	C-terminal	domain
TPR_1	PF00515.28	gi|298675065|ref|YP_003726815.1|	-	8.1e-13	47.6	8.7	0.0007	19.3	0.5	3.8	3	0	0	3	3	3	3	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|298675065|ref|YP_003726815.1|	-	1.2e-12	47.0	6.2	0.0002	21.3	0.3	3.7	3	0	0	3	3	3	3	Tetratricopeptide	repeat
ResIII	PF04851.15	gi|298675065|ref|YP_003726815.1|	-	1.5e-11	44.6	0.0	3.8e-11	43.3	0.0	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
TPR_11	PF13414.6	gi|298675065|ref|YP_003726815.1|	-	3.3e-11	42.7	1.3	9.4e-05	22.0	0.2	2.6	2	0	0	2	2	2	2	TPR	repeat
TPR_8	PF13181.6	gi|298675065|ref|YP_003726815.1|	-	1.6e-10	40.3	4.0	0.026	14.7	0.1	4.0	3	0	0	3	3	3	3	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|298675065|ref|YP_003726815.1|	-	5.4e-10	39.6	0.4	3.9e-06	27.3	0.0	2.4	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|298675065|ref|YP_003726815.1|	-	1.5e-07	31.5	0.0	0.00064	19.8	0.0	2.4	1	1	1	2	2	2	2	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.6	gi|298675065|ref|YP_003726815.1|	-	1.4e-05	25.1	6.6	0.0098	15.9	0.2	3.5	1	1	2	3	3	3	2	Fis1	C-terminal	tetratricopeptide	repeat
TPR_14	PF13428.6	gi|298675065|ref|YP_003726815.1|	-	3e-05	24.5	0.0	0.095	13.6	0.0	3.0	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|298675065|ref|YP_003726815.1|	-	0.00014	22.4	0.0	0.31	11.7	0.0	2.4	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|298675065|ref|YP_003726815.1|	-	0.00036	20.8	0.5	0.019	15.2	0.4	2.6	1	1	1	2	2	2	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|298675065|ref|YP_003726815.1|	-	0.00087	19.5	4.7	0.0016	18.6	4.7	1.5	1	0	0	1	1	1	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
MIT	PF04212.18	gi|298675065|ref|YP_003726815.1|	-	0.0095	16.0	1.5	0.5	10.5	0.1	3.2	2	1	1	3	3	3	1	MIT	(microtubule	interacting	and	transport)	domain
Glycos_transf_1	PF00534.20	gi|298675065|ref|YP_003726815.1|	-	0.023	14.2	0.0	0.058	12.9	0.0	1.7	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Alkyl_sulf_dimr	PF14863.6	gi|298675065|ref|YP_003726815.1|	-	0.25	11.8	0.8	21	5.6	0.1	2.7	2	1	1	3	3	2	0	Alkyl	sulfatase	dimerisation
TPR_17	PF13431.6	gi|298675065|ref|YP_003726815.1|	-	5.2	7.7	11.9	0.17	12.4	0.2	3.5	4	0	0	4	4	2	0	Tetratricopeptide	repeat
OrfB_IS605	PF01385.19	gi|298675066|ref|YP_003726816.1|	-	1.4e-22	80.1	0.0	2.9e-22	79.1	0.0	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675066|ref|YP_003726816.1|	-	7e-12	45.1	0.0	1.5e-11	44.0	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Glyco_hydro_97	PF10566.9	gi|298675066|ref|YP_003726816.1|	-	2.9e-05	23.5	0.1	5.2e-05	22.7	0.1	1.4	1	0	0	1	1	1	1	Glycoside	hydrolase	97
HEPN_Swt1	PF18731.1	gi|298675066|ref|YP_003726816.1|	-	0.093	13.1	0.9	0.21	12.0	0.9	1.6	1	0	0	1	1	1	0	Swt1-like	HEPN
EAP30	PF04157.16	gi|298675066|ref|YP_003726816.1|	-	0.15	11.3	0.0	0.25	10.6	0.0	1.4	1	0	0	1	1	1	0	EAP30/Vps36	family
PAS_9	PF13426.7	gi|298675067|ref|YP_003726817.1|	-	6.6e-50	167.7	9.8	1.7e-11	44.2	0.0	5.9	6	0	0	6	6	6	5	PAS	domain
PAS_3	PF08447.12	gi|298675067|ref|YP_003726817.1|	-	2.3e-40	136.8	0.7	3e-18	65.9	0.2	6.3	5	1	0	5	5	5	3	PAS	fold
PAS	PF00989.25	gi|298675067|ref|YP_003726817.1|	-	2.1e-39	134.0	0.2	9.9e-11	41.6	0.0	6.3	5	2	0	5	5	5	5	PAS	fold
PAS_4	PF08448.10	gi|298675067|ref|YP_003726817.1|	-	3.1e-39	133.6	0.0	3.1e-08	33.9	0.0	5.3	5	0	0	5	5	5	5	PAS	fold
HATPase_c	PF02518.26	gi|298675067|ref|YP_003726817.1|	-	1.2e-26	93.4	0.5	3.4e-26	91.9	0.1	2.0	2	0	0	2	2	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_8	PF13188.7	gi|298675067|ref|YP_003726817.1|	-	2.3e-19	69.0	0.0	8.9e-05	22.4	0.0	5.3	5	0	0	5	5	5	3	PAS	domain
HisKA	PF00512.25	gi|298675067|ref|YP_003726817.1|	-	5.6e-17	61.5	3.9	3.2e-14	52.7	0.0	4.7	5	0	0	5	5	5	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_11	PF14598.6	gi|298675067|ref|YP_003726817.1|	-	1.8e-12	47.4	0.2	4.9e-08	33.1	0.0	4.4	5	0	0	5	5	5	2	PAS	domain
PAS_10	PF13596.6	gi|298675067|ref|YP_003726817.1|	-	2e-08	34.8	3.0	0.073	13.7	0.0	5.1	3	1	1	4	4	4	2	PAS	domain
PAS_7	PF12860.7	gi|298675067|ref|YP_003726817.1|	-	5.6e-06	26.5	0.7	0.14	12.4	0.0	4.6	3	1	2	5	5	5	2	PAS	fold
GAF_2	PF13185.6	gi|298675067|ref|YP_003726817.1|	-	0.0011	19.2	0.0	0.0025	18.1	0.0	1.5	1	0	0	1	1	1	1	GAF	domain
PAS_12	PF18095.1	gi|298675067|ref|YP_003726817.1|	-	0.0035	17.0	3.1	1.7	8.3	0.1	3.4	4	0	0	4	4	4	2	UPF0242	C-terminal	PAS-like	domain
HATPase_c_3	PF13589.6	gi|298675067|ref|YP_003726817.1|	-	0.015	15.1	0.0	0.049	13.5	0.0	1.9	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAN_3	PF08277.12	gi|298675067|ref|YP_003726817.1|	-	0.088	12.6	1.5	0.25	11.2	0.1	2.3	2	0	0	2	2	2	0	PAN-like	domain
Fascin	PF06268.13	gi|298675067|ref|YP_003726817.1|	-	0.13	12.5	0.1	0.44	10.8	0.1	2.0	1	0	0	1	1	1	0	Fascin	domain
Mt_ATP-synt_D	PF05873.12	gi|298675067|ref|YP_003726817.1|	-	1.6	8.6	5.7	12	5.7	1.8	3.7	3	0	0	3	3	3	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
PAS_9	PF13426.7	gi|298675068|ref|YP_003726818.1|	-	4.4e-25	87.9	3.1	9.7e-10	38.6	0.1	3.7	3	0	0	3	3	3	3	PAS	domain
HATPase_c	PF02518.26	gi|298675068|ref|YP_003726818.1|	-	3.1e-21	76.0	0.2	2.4e-20	73.1	0.0	2.5	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS	PF00989.25	gi|298675068|ref|YP_003726818.1|	-	3.5e-20	72.1	0.0	3.6e-07	30.2	0.0	3.9	3	1	0	3	3	3	3	PAS	fold
PAS_8	PF13188.7	gi|298675068|ref|YP_003726818.1|	-	3.3e-16	58.9	0.1	1.5e-07	31.3	0.1	3.8	3	0	0	3	3	3	2	PAS	domain
PAS_4	PF08448.10	gi|298675068|ref|YP_003726818.1|	-	2.4e-15	56.8	0.0	0.0012	19.0	0.0	3.3	3	0	0	3	3	3	3	PAS	fold
PAS_3	PF08447.12	gi|298675068|ref|YP_003726818.1|	-	1.5e-08	34.8	0.0	0.015	15.5	0.0	3.6	3	0	0	3	3	3	2	PAS	fold
GAF	PF01590.26	gi|298675068|ref|YP_003726818.1|	-	0.00016	22.3	0.0	0.00033	21.3	0.0	1.5	1	0	0	1	1	1	1	GAF	domain
GAF_2	PF13185.6	gi|298675068|ref|YP_003726818.1|	-	0.00034	20.9	0.0	0.00076	19.8	0.0	1.5	1	0	0	1	1	1	1	GAF	domain
GAF_3	PF13492.6	gi|298675068|ref|YP_003726818.1|	-	0.0044	17.3	0.0	0.0089	16.4	0.0	1.5	1	0	0	1	1	1	1	GAF	domain
HisKA	PF00512.25	gi|298675068|ref|YP_003726818.1|	-	0.0052	16.8	1.3	0.017	15.1	0.0	2.6	3	0	0	3	3	3	1	His	Kinase	A	(phospho-acceptor)	domain
HATPase_c_2	PF13581.6	gi|298675068|ref|YP_003726818.1|	-	0.13	12.2	0.0	0.39	10.7	0.0	1.7	2	0	0	2	2	2	0	Histidine	kinase-like	ATPase	domain
Ribosomal_L22	PF00237.19	gi|298675068|ref|YP_003726818.1|	-	0.23	11.7	0.4	0.58	10.4	0.4	1.6	1	0	0	1	1	1	0	Ribosomal	protein	L22p/L17e
PAPS_reduct	PF01507.19	gi|298675069|ref|YP_003726819.1|	-	8.9e-41	139.8	0.0	1.6e-40	138.9	0.0	1.5	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Fer4_7	PF12838.7	gi|298675069|ref|YP_003726819.1|	-	3.9e-05	24.2	11.6	3.9e-05	24.2	11.6	3.0	4	0	0	4	4	4	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675069|ref|YP_003726819.1|	-	4.8e-05	23.4	12.4	4.8e-05	23.4	12.4	2.7	4	0	0	4	4	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675069|ref|YP_003726819.1|	-	8.3e-05	22.7	13.0	8.3e-05	22.7	13.0	3.1	4	0	0	4	4	4	1	4Fe-4S	dicluster	domain
TBP	PF00352.21	gi|298675069|ref|YP_003726819.1|	-	0.0012	18.7	0.1	0.0027	17.6	0.1	1.6	1	0	0	1	1	1	1	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
Fer4	PF00037.27	gi|298675069|ref|YP_003726819.1|	-	0.0024	17.6	6.4	0.0024	17.6	6.4	3.6	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|298675069|ref|YP_003726819.1|	-	0.0068	17.3	12.7	0.02	15.8	2.3	4.5	3	2	1	5	5	4	2	4Fe-4S	double	cluster	binding	domain
NAD_synthase	PF02540.17	gi|298675069|ref|YP_003726819.1|	-	0.053	12.6	0.0	0.11	11.6	0.0	1.5	1	0	0	1	1	1	0	NAD	synthase
DUF1827	PF08860.10	gi|298675069|ref|YP_003726819.1|	-	0.11	12.7	0.2	0.11	12.7	0.2	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1827)
ATP_bind_3	PF01171.20	gi|298675069|ref|YP_003726819.1|	-	0.16	11.7	0.0	0.36	10.6	0.0	1.6	1	0	0	1	1	1	0	PP-loop	family
Fer4_18	PF13746.6	gi|298675069|ref|YP_003726819.1|	-	1.2	9.3	10.8	5.8	7.2	10.8	2.2	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
FAD_binding_3	PF01494.19	gi|298675070|ref|YP_003726820.1|	-	1.6e-19	70.4	0.0	1.7e-15	57.2	0.0	2.7	2	1	0	2	2	2	2	FAD	binding	domain
Pyr_redox_3	PF13738.6	gi|298675070|ref|YP_003726820.1|	-	1e-11	44.7	0.2	3.3e-05	23.3	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|298675070|ref|YP_003726820.1|	-	5.6e-10	38.9	0.1	1.5e-06	27.7	0.0	2.2	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.14	gi|298675070|ref|YP_003726820.1|	-	6.7e-10	38.4	0.0	4.1e-05	22.6	0.0	2.3	1	1	1	2	2	2	2	Tryptophan	halogenase
DAO	PF01266.24	gi|298675070|ref|YP_003726820.1|	-	3.5e-09	36.7	0.0	0.0013	18.4	0.0	2.1	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|298675070|ref|YP_003726820.1|	-	7e-08	31.6	0.1	1.1e-05	24.3	0.0	2.1	2	0	0	2	2	2	2	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|298675070|ref|YP_003726820.1|	-	4.6e-07	29.5	0.0	7.6e-07	28.8	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.12	gi|298675070|ref|YP_003726820.1|	-	5.7e-07	28.9	0.0	1.8e-06	27.2	0.0	1.7	2	0	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_2	PF00890.24	gi|298675070|ref|YP_003726820.1|	-	6.1e-06	25.6	0.0	1.5e-05	24.3	0.0	1.6	2	0	0	2	2	2	1	FAD	binding	domain
GIDA	PF01134.22	gi|298675070|ref|YP_003726820.1|	-	2.4e-05	23.6	0.1	5.3e-05	22.5	0.1	1.5	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|298675070|ref|YP_003726820.1|	-	7.6e-05	22.1	0.0	0.00068	18.9	0.0	2.0	2	0	0	2	2	2	1	Thi4	family
NAD_binding_8	PF13450.6	gi|298675070|ref|YP_003726820.1|	-	0.00018	21.7	0.0	0.001	19.2	0.0	2.2	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.27	gi|298675070|ref|YP_003726820.1|	-	0.0027	18.2	0.0	4.6	7.9	0.0	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Shikimate_DH	PF01488.20	gi|298675070|ref|YP_003726820.1|	-	0.023	14.8	0.0	0.041	13.9	0.0	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_9	PF13454.6	gi|298675070|ref|YP_003726820.1|	-	0.17	11.8	0.0	1.9	8.5	0.0	2.2	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Polysacc_synt_C	PF14667.6	gi|298675071|ref|YP_003726821.1|	-	4.9e-19	68.8	20.0	4.9e-19	68.8	20.0	3.6	4	1	0	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt	PF01943.17	gi|298675071|ref|YP_003726821.1|	-	2.6e-17	63.1	21.0	2.6e-17	63.1	21.0	2.3	1	1	1	2	2	2	2	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.6	gi|298675071|ref|YP_003726821.1|	-	1.1e-16	60.9	14.5	1.1e-16	60.9	14.5	2.1	1	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
MatE	PF01554.18	gi|298675071|ref|YP_003726821.1|	-	1.6e-12	47.4	4.3	1.6e-12	47.4	4.3	4.0	4	0	0	4	4	4	1	MatE
MurJ	PF03023.14	gi|298675071|ref|YP_003726821.1|	-	2.8e-08	32.8	33.8	2.8e-08	32.8	32.7	1.6	1	1	0	1	1	1	1	Lipid	II	flippase	MurJ
bPH_2	PF03703.14	gi|298675072|ref|YP_003726822.1|	-	3.2e-17	62.5	0.1	4.4e-17	62.0	0.1	1.2	1	0	0	1	1	1	1	Bacterial	PH	domain
bPH_4	PF06713.11	gi|298675072|ref|YP_003726822.1|	-	0.097	12.8	0.0	0.18	11.9	0.0	1.5	1	0	0	1	1	1	0	Bacterial	PH	domain
bPH_2	PF03703.14	gi|298675073|ref|YP_003726823.1|	-	4.1e-36	123.0	0.2	5e-13	49.0	0.1	3.2	3	0	0	3	3	3	3	Bacterial	PH	domain
Rtt106	PF08512.12	gi|298675073|ref|YP_003726823.1|	-	0.012	16.0	1.1	6.8	7.2	0.1	2.8	3	0	0	3	3	3	0	Histone	chaperone	Rttp106-like
DUF1345	PF07077.11	gi|298675073|ref|YP_003726823.1|	-	0.044	13.5	3.5	0.073	12.8	0.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1345)
bPH_4	PF06713.11	gi|298675073|ref|YP_003726823.1|	-	0.31	11.1	3.4	2.6	8.2	0.1	3.5	4	0	0	4	4	4	0	Bacterial	PH	domain
DUF2207	PF09972.9	gi|298675073|ref|YP_003726823.1|	-	5.1	5.8	11.7	0.064	12.0	0.5	2.6	2	1	1	3	3	3	0	Predicted	membrane	protein	(DUF2207)
DHHC	PF01529.20	gi|298675073|ref|YP_003726823.1|	-	9.2	6.4	8.2	16	5.6	3.2	2.5	2	0	0	2	2	2	0	DHHC	palmitoyltransferase
DHH	PF01368.20	gi|298675074|ref|YP_003726824.1|	-	4e-06	27.0	0.2	7e-06	26.2	0.2	1.4	1	0	0	1	1	1	1	DHH	family
APS_kinase	PF01583.20	gi|298675075|ref|YP_003726825.1|	-	1.7e-60	203.5	0.0	2e-60	203.3	0.0	1.0	1	0	0	1	1	1	1	Adenylylsulphate	kinase
KTI12	PF08433.10	gi|298675075|ref|YP_003726825.1|	-	3.9e-08	33.1	0.0	4.6e-08	32.8	0.0	1.1	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_33	PF13671.6	gi|298675075|ref|YP_003726825.1|	-	1.3e-06	28.7	0.0	2.2e-06	27.9	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|298675075|ref|YP_003726825.1|	-	1.6e-05	25.4	0.0	2.9e-05	24.6	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
6PF2K	PF01591.18	gi|298675075|ref|YP_003726825.1|	-	5.6e-05	22.6	0.0	7.3e-05	22.2	0.0	1.2	1	0	0	1	1	1	1	6-phosphofructo-2-kinase
Ploopntkinase3	PF18751.1	gi|298675075|ref|YP_003726825.1|	-	0.0017	18.3	0.0	0.004	17.1	0.0	1.6	1	1	1	2	2	2	1	P-loop	Nucleotide	Kinase3
AAA_30	PF13604.6	gi|298675075|ref|YP_003726825.1|	-	0.0021	17.8	0.0	0.0027	17.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
MeaB	PF03308.16	gi|298675075|ref|YP_003726825.1|	-	0.0021	17.1	0.0	0.004	16.2	0.0	1.4	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
NTPase_1	PF03266.15	gi|298675075|ref|YP_003726825.1|	-	0.0036	17.2	0.2	0.006	16.5	0.2	1.5	1	1	0	1	1	1	1	NTPase
AAA_16	PF13191.6	gi|298675075|ref|YP_003726825.1|	-	0.0038	17.6	0.0	0.0049	17.3	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_28	PF13521.6	gi|298675075|ref|YP_003726825.1|	-	0.0085	16.3	0.1	0.018	15.3	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.22	gi|298675075|ref|YP_003726825.1|	-	0.012	16.0	0.0	0.053	13.9	0.0	2.0	2	0	0	2	2	2	0	RNA	helicase
CbiA	PF01656.23	gi|298675075|ref|YP_003726825.1|	-	0.014	15.5	0.0	0.018	15.1	0.0	1.2	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
SRP54	PF00448.22	gi|298675075|ref|YP_003726825.1|	-	0.018	14.6	0.0	0.034	13.8	0.0	1.6	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
PRK	PF00485.18	gi|298675075|ref|YP_003726825.1|	-	0.038	13.7	0.0	0.058	13.1	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_5	PF07728.14	gi|298675075|ref|YP_003726825.1|	-	0.042	13.8	0.0	0.067	13.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.6	gi|298675075|ref|YP_003726825.1|	-	0.045	14.2	0.2	0.096	13.1	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.22	gi|298675075|ref|YP_003726825.1|	-	0.063	12.5	0.0	0.075	12.2	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
Thymidylate_kin	PF02223.17	gi|298675075|ref|YP_003726825.1|	-	0.069	12.8	0.1	0.15	11.8	0.1	1.6	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_22	PF13401.6	gi|298675075|ref|YP_003726825.1|	-	0.082	13.2	0.0	0.14	12.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Sigma54_CBD	PF04963.13	gi|298675075|ref|YP_003726825.1|	-	0.094	12.6	0.0	0.51	10.2	0.0	2.1	3	0	0	3	3	3	0	Sigma-54	factor,	core	binding	domain
ABC_tran	PF00005.27	gi|298675075|ref|YP_003726825.1|	-	0.12	12.9	0.1	0.16	12.5	0.0	1.3	1	1	0	1	1	1	0	ABC	transporter
AAA_24	PF13479.6	gi|298675075|ref|YP_003726825.1|	-	0.15	11.7	0.2	0.31	10.7	0.1	1.6	2	0	0	2	2	2	0	AAA	domain
ParA	PF10609.9	gi|298675075|ref|YP_003726825.1|	-	0.2	11.1	0.0	0.3	10.5	0.0	1.3	1	0	0	1	1	1	0	NUBPL	iron-transfer	P-loop	NTPase
dNK	PF01712.19	gi|298675075|ref|YP_003726825.1|	-	0.23	11.3	0.5	3	7.6	0.0	2.1	1	1	0	2	2	2	0	Deoxynucleoside	kinase
Na_sulph_symp	PF00939.19	gi|298675076|ref|YP_003726826.1|	-	1.2e-75	255.4	36.6	1.5e-75	255.1	36.6	1.0	1	0	0	1	1	1	1	Sodium:sulfate	symporter	transmembrane	region
CitMHS	PF03600.16	gi|298675076|ref|YP_003726826.1|	-	5.9e-38	130.8	47.9	1.5e-22	80.2	19.2	2.2	1	1	1	2	2	2	2	Citrate	transporter
DctM	PF06808.12	gi|298675076|ref|YP_003726826.1|	-	0.028	13.2	41.0	0.26	10.1	21.7	2.9	1	1	1	2	2	2	0	Tripartite	ATP-independent	periplasmic	transporter,	DctM	component
Usp	PF00582.26	gi|298675077|ref|YP_003726827.1|	-	6.8e-06	26.7	2.9	1.4e-05	25.6	2.9	1.6	1	1	0	1	1	1	1	Universal	stress	protein	family
DNA_photolyase	PF00875.18	gi|298675077|ref|YP_003726827.1|	-	0.012	15.6	0.0	0.027	14.5	0.0	1.5	1	1	0	1	1	1	0	DNA	photolyase
LPD7	PF18821.1	gi|298675077|ref|YP_003726827.1|	-	0.018	15.2	0.2	3	8.0	0.0	2.2	2	0	0	2	2	2	0	Large	polyvalent	protein-associated	domain	7
AP_endonuc_2	PF01261.24	gi|298675077|ref|YP_003726827.1|	-	0.023	14.1	0.1	0.048	13.1	0.0	1.4	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
NTP_transferase	PF00483.23	gi|298675078|ref|YP_003726828.1|	-	7.8e-44	150.1	0.0	8.7e-44	150.0	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|298675078|ref|YP_003726828.1|	-	1.8e-13	51.1	0.0	2.2e-13	50.9	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|298675078|ref|YP_003726828.1|	-	3.5e-09	36.7	0.0	1.7e-08	34.5	0.0	1.9	1	1	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Glycos_transf_2	PF00535.26	gi|298675078|ref|YP_003726828.1|	-	0.0077	16.0	0.1	0.013	15.3	0.1	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glycos_transf_2	PF00535.26	gi|298675079|ref|YP_003726829.1|	-	3.5e-22	79.0	0.4	5.1e-22	78.5	0.4	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|298675079|ref|YP_003726829.1|	-	2.5e-15	57.0	0.0	3.6e-15	56.5	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|298675079|ref|YP_003726829.1|	-	1.3e-10	41.5	0.7	4e-10	40.0	0.7	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_2	PF10111.9	gi|298675079|ref|YP_003726829.1|	-	8.4e-07	28.7	0.8	1.3e-06	28.1	0.8	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.6	gi|298675079|ref|YP_003726829.1|	-	8.6e-06	25.3	0.0	1.4e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Chitin_synth_2	PF03142.15	gi|298675079|ref|YP_003726829.1|	-	0.00022	20.0	7.5	0.0019	16.9	0.0	2.4	3	0	0	3	3	3	2	Chitin	synthase
Anp1	PF03452.14	gi|298675079|ref|YP_003726829.1|	-	0.00089	18.7	0.0	0.0014	18.1	0.0	1.3	1	0	0	1	1	1	1	Anp1
Glyco_tranf_2_4	PF13704.6	gi|298675079|ref|YP_003726829.1|	-	0.057	13.9	0.2	0.14	12.7	0.2	1.7	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
DUF2694	PF10904.8	gi|298675079|ref|YP_003726829.1|	-	0.1	12.7	0.0	0.2	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2694)
DUF4898	PF16239.5	gi|298675079|ref|YP_003726829.1|	-	1.1	9.3	5.9	15	5.6	0.1	3.1	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4898)
Ndc1_Nup	PF09531.10	gi|298675079|ref|YP_003726829.1|	-	4.8	5.7	7.3	6.7	5.3	7.3	1.2	1	0	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
OrfB_IS605	PF01385.19	gi|298675080|ref|YP_003726830.1|	-	2.6e-22	79.3	0.6	8e-22	77.7	0.6	1.9	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675080|ref|YP_003726830.1|	-	2.1e-08	34.0	0.0	5.2e-08	32.7	0.0	1.7	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF986	PF06173.12	gi|298675080|ref|YP_003726830.1|	-	0.015	15.4	0.1	0.015	15.4	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF986)
CRF1	PF10380.9	gi|298675080|ref|YP_003726830.1|	-	0.02	15.2	0.1	0.043	14.2	0.1	1.5	1	0	0	1	1	1	0	Transcription	factor	CRF1
PhaP_Bmeg	PF09602.10	gi|298675080|ref|YP_003726830.1|	-	0.02	14.8	2.0	0.043	13.7	2.0	1.5	1	0	0	1	1	1	0	Polyhydroxyalkanoic	acid	inclusion	protein	(PhaP_Bmeg)
HATPase_c	PF02518.26	gi|298675081|ref|YP_003726831.1|	-	1.8e-33	115.3	0.2	6.8e-33	113.5	0.1	2.1	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HisKA	PF00512.25	gi|298675081|ref|YP_003726831.1|	-	1.1e-21	76.6	0.1	5.6e-21	74.4	0.0	2.3	2	0	0	2	2	2	1	His	Kinase	A	(phospho-acceptor)	domain
PAS	PF00989.25	gi|298675081|ref|YP_003726831.1|	-	6e-18	64.9	0.0	1.1e-08	35.0	0.0	2.7	2	1	0	2	2	2	2	PAS	fold
PAS_4	PF08448.10	gi|298675081|ref|YP_003726831.1|	-	1.9e-17	63.5	0.0	4.7e-10	39.7	0.0	2.7	2	0	0	2	2	2	2	PAS	fold
PAS_9	PF13426.7	gi|298675081|ref|YP_003726831.1|	-	1.9e-17	63.4	0.4	3.6e-08	33.6	0.0	2.8	2	0	0	2	2	2	2	PAS	domain
PAS_8	PF13188.7	gi|298675081|ref|YP_003726831.1|	-	4.9e-14	52.0	0.3	5.3e-08	32.7	0.1	2.7	2	0	0	2	2	2	2	PAS	domain
PAS_3	PF08447.12	gi|298675081|ref|YP_003726831.1|	-	6.7e-08	32.7	0.0	0.0031	17.8	0.0	2.7	2	0	0	2	2	2	2	PAS	fold
HATPase_c_3	PF13589.6	gi|298675081|ref|YP_003726831.1|	-	7.5e-05	22.6	0.0	0.00017	21.5	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HOOK	PF05622.12	gi|298675081|ref|YP_003726831.1|	-	0.031	12.5	0.2	0.06	11.5	0.2	1.4	1	0	0	1	1	1	0	HOOK	protein
HATPase_c_5	PF14501.6	gi|298675081|ref|YP_003726831.1|	-	0.16	11.9	0.0	0.16	11.9	0.0	2.3	2	1	0	2	2	2	0	GHKL	domain
PAS_4	PF08448.10	gi|298675082|ref|YP_003726832.1|	-	4.2e-32	110.7	0.0	3.1e-11	43.5	0.0	3.8	4	1	0	4	4	4	3	PAS	fold
PAS_9	PF13426.7	gi|298675082|ref|YP_003726832.1|	-	1.3e-26	92.9	7.4	7.3e-11	42.2	0.1	3.8	3	0	0	3	3	3	3	PAS	domain
HATPase_c	PF02518.26	gi|298675082|ref|YP_003726832.1|	-	4.1e-25	88.5	0.8	1e-24	87.2	0.0	2.1	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS	PF00989.25	gi|298675082|ref|YP_003726832.1|	-	1.9e-18	66.5	0.0	4.8e-06	26.6	0.0	4.3	3	1	0	3	3	3	3	PAS	fold
HisKA	PF00512.25	gi|298675082|ref|YP_003726832.1|	-	4.1e-14	52.4	0.0	1.6e-13	50.5	0.0	2.1	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_8	PF13188.7	gi|298675082|ref|YP_003726832.1|	-	4.5e-11	42.5	0.0	0.0014	18.6	0.0	3.8	3	0	0	3	3	3	2	PAS	domain
PAS_10	PF13596.6	gi|298675082|ref|YP_003726832.1|	-	3.6e-09	37.2	5.2	0.0034	17.9	0.1	4.1	4	0	0	4	4	4	2	PAS	domain
PAS_3	PF08447.12	gi|298675082|ref|YP_003726832.1|	-	1.8e-08	34.5	0.1	2.5e-05	24.5	0.0	4.1	4	0	0	4	4	4	1	PAS	fold
PAS_6	PF08348.11	gi|298675082|ref|YP_003726832.1|	-	0.00041	20.2	2.6	0.0064	16.4	0.3	2.7	2	0	0	2	2	2	1	YheO-like	PAS	domain
HATPase_c_3	PF13589.6	gi|298675082|ref|YP_003726832.1|	-	0.00072	19.4	0.1	0.0019	18.0	0.1	1.7	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
LUC7	PF03194.15	gi|298675082|ref|YP_003726832.1|	-	0.002	17.8	5.2	0.019	14.7	1.7	3.0	2	1	0	2	2	2	1	LUC7	N_terminus
HATPase_c_5	PF14501.6	gi|298675082|ref|YP_003726832.1|	-	0.0049	16.7	0.1	0.0049	16.7	0.1	2.9	3	0	0	3	3	3	1	GHKL	domain
DUF1151	PF06625.11	gi|298675082|ref|YP_003726832.1|	-	0.033	14.1	0.2	0.033	14.1	0.2	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1151)
PAS_7	PF12860.7	gi|298675082|ref|YP_003726832.1|	-	0.048	13.8	0.9	26	5.0	0.0	4.4	2	2	0	3	3	3	0	PAS	fold
NYD-SP28_assoc	PF14775.6	gi|298675082|ref|YP_003726832.1|	-	0.19	11.9	9.3	0.26	11.4	3.0	2.9	2	0	0	2	2	2	0	Sperm	tail	C-terminal	domain
Flu_NS2	PF00601.19	gi|298675082|ref|YP_003726832.1|	-	2.4	8.5	6.1	0.88	9.9	0.1	3.1	3	0	0	3	3	3	0	Influenza	non-structural	protein	(NS2)
PAS_3	PF08447.12	gi|298675083|ref|YP_003726833.1|	-	3.1e-47	158.8	2.0	1.5e-17	63.6	0.1	4.9	5	0	0	5	5	5	4	PAS	fold
PAS_9	PF13426.7	gi|298675083|ref|YP_003726833.1|	-	4.4e-47	158.6	7.0	1.1e-10	41.7	0.0	5.8	6	0	0	6	6	6	5	PAS	domain
PAS	PF00989.25	gi|298675083|ref|YP_003726833.1|	-	9.6e-39	131.9	0.0	6e-12	45.6	0.0	5.4	5	0	0	5	5	5	5	PAS	fold
PAS_4	PF08448.10	gi|298675083|ref|YP_003726833.1|	-	2.2e-38	130.9	0.0	5.7e-08	33.0	0.0	5.2	5	0	0	5	5	5	5	PAS	fold
HATPase_c	PF02518.26	gi|298675083|ref|YP_003726833.1|	-	4.2e-20	72.3	0.1	1.2e-19	70.8	0.1	1.9	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_8	PF13188.7	gi|298675083|ref|YP_003726833.1|	-	5.7e-17	61.3	0.0	2.3e-06	27.5	0.0	5.5	5	0	0	5	5	5	3	PAS	domain
PAS_7	PF12860.7	gi|298675083|ref|YP_003726833.1|	-	7.5e-07	29.3	0.1	0.099	12.8	0.0	4.2	4	0	0	4	4	4	2	PAS	fold
PAS_11	PF14598.6	gi|298675083|ref|YP_003726833.1|	-	2.9e-06	27.4	0.0	5.9e-05	23.2	0.0	2.7	2	0	0	2	2	2	1	PAS	domain
HisKA	PF00512.25	gi|298675083|ref|YP_003726833.1|	-	5.5e-05	23.1	0.5	0.00026	21.0	0.1	2.4	2	0	0	2	2	2	1	His	Kinase	A	(phospho-acceptor)	domain
HATPase_c_2	PF13581.6	gi|298675083|ref|YP_003726833.1|	-	0.0046	16.9	0.0	0.031	14.2	0.0	2.2	2	0	0	2	2	2	1	Histidine	kinase-like	ATPase	domain
NOGCT	PF08155.11	gi|298675083|ref|YP_003726833.1|	-	0.011	15.7	0.0	0.057	13.4	0.0	2.3	1	0	0	1	1	1	0	NOGCT	(NUC087)	domain
HATPase_c_3	PF13589.6	gi|298675083|ref|YP_003726833.1|	-	0.021	14.6	0.1	0.067	13.0	0.1	1.8	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
SPOB_a	PF14689.6	gi|298675083|ref|YP_003726833.1|	-	0.11	12.2	0.6	0.44	10.3	0.2	2.3	2	0	0	2	2	2	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
DUF4870	PF09685.10	gi|298675084|ref|YP_003726834.1|	-	3.1e-05	24.0	11.6	4e-05	23.7	11.6	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4870)
TIC20	PF16166.5	gi|298675084|ref|YP_003726834.1|	-	0.095	12.5	4.2	0.12	12.2	4.2	1.1	1	0	0	1	1	1	0	Chloroplast	import	apparatus	Tic20-like
DUF4231	PF14015.6	gi|298675084|ref|YP_003726834.1|	-	0.23	11.9	6.6	0.16	12.4	4.5	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4231)
DUF3754	PF12576.8	gi|298675084|ref|YP_003726834.1|	-	1.7	8.6	5.2	1.9	8.4	2.5	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3754)
DUF4389	PF14333.6	gi|298675084|ref|YP_003726834.1|	-	3.2	7.7	15.7	1.9	8.5	0.2	2.9	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4389)
DUF4064	PF13273.6	gi|298675084|ref|YP_003726834.1|	-	8.4	6.7	23.7	8.7	6.7	6.3	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
MetOD1	PF18546.1	gi|298675086|ref|YP_003726836.1|	-	4.4e-48	163.2	3.0	6.2e-48	162.7	3.0	1.2	1	0	0	1	1	1	1	Metanogen	output	domain	1
Response_reg	PF00072.24	gi|298675086|ref|YP_003726836.1|	-	2.2e-29	101.9	0.6	5e-29	100.7	0.6	1.6	1	0	0	1	1	1	1	Response	regulator	receiver	domain
IPT	PF01745.16	gi|298675086|ref|YP_003726836.1|	-	0.03	13.7	0.8	0.35	10.2	0.2	2.3	2	1	0	2	2	2	0	Isopentenyl	transferase
DUF1864	PF08933.11	gi|298675086|ref|YP_003726836.1|	-	0.1	11.3	0.4	0.15	10.8	0.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1864)
Lar_restr_allev	PF14354.6	gi|298675087|ref|YP_003726837.1|	-	0.089	13.2	0.1	0.18	12.2	0.1	1.6	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-piccolo	PF05715.13	gi|298675087|ref|YP_003726837.1|	-	0.1	12.8	1.2	0.3	11.3	1.2	1.8	1	1	0	1	1	1	0	Piccolo	Zn-finger
zf-Sec23_Sec24	PF04810.15	gi|298675087|ref|YP_003726837.1|	-	2.1	8.4	4.8	19	5.4	0.1	2.7	2	1	1	3	3	3	0	Sec23/Sec24	zinc	finger
MetOD1	PF18546.1	gi|298675088|ref|YP_003726838.1|	-	2.8e-39	134.6	1.0	6.1e-39	133.5	1.1	1.4	2	0	0	2	2	2	1	Metanogen	output	domain	1
PAS_4	PF08448.10	gi|298675088|ref|YP_003726838.1|	-	4.6e-06	26.9	0.0	2.3e-05	24.6	0.0	2.0	1	1	0	1	1	1	1	PAS	fold
TFIIB	PF00382.19	gi|298675089|ref|YP_003726839.1|	-	3.3e-44	148.8	2.0	3.3e-21	75.1	0.1	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.12	gi|298675089|ref|YP_003726839.1|	-	2.6e-17	62.0	1.6	2.6e-17	62.0	1.6	2.1	3	0	0	3	3	3	1	TFIIB	zinc-binding
Sigma70_r4	PF04545.16	gi|298675089|ref|YP_003726839.1|	-	8.5e-05	22.0	0.7	0.023	14.2	0.1	3.0	2	0	0	2	2	2	1	Sigma-70,	region	4
OrfB_Zn_ribbon	PF07282.11	gi|298675089|ref|YP_003726839.1|	-	0.00015	21.6	0.4	0.00036	20.4	0.4	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-ACC	PF17848.1	gi|298675089|ref|YP_003726839.1|	-	0.0017	18.4	4.9	0.039	14.0	3.2	2.7	2	0	0	2	2	2	1	Acetyl-coA	carboxylase	zinc	finger	domain
HTH_AsnC-type	PF13404.6	gi|298675089|ref|YP_003726839.1|	-	0.014	15.2	0.2	0.051	13.4	0.2	2.0	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
RPA_interact_C	PF14768.6	gi|298675089|ref|YP_003726839.1|	-	0.039	14.5	0.1	3.3	8.4	0.0	2.6	2	0	0	2	2	2	0	Replication	protein	A	interacting	C-terminal
Zn-ribbon_8	PF09723.10	gi|298675089|ref|YP_003726839.1|	-	0.078	13.1	5.7	0.13	12.4	0.4	3.1	2	1	1	3	3	3	0	Zinc	ribbon	domain
HTH_Tnp_ISL3	PF13542.6	gi|298675089|ref|YP_003726839.1|	-	0.085	12.3	0.3	0.25	10.8	0.1	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Cyclin_N	PF00134.23	gi|298675089|ref|YP_003726839.1|	-	0.12	12.1	0.0	11	5.7	0.0	2.3	1	1	1	2	2	2	0	Cyclin,	N-terminal	domain
Elf1	PF05129.13	gi|298675089|ref|YP_003726839.1|	-	0.12	12.4	2.2	0.14	12.2	0.5	1.9	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
HTH_31	PF13560.6	gi|298675089|ref|YP_003726839.1|	-	0.16	12.3	5.0	7.8	6.9	0.1	3.4	3	1	0	3	3	3	0	Helix-turn-helix	domain
zf-ribbon_3	PF13248.6	gi|298675089|ref|YP_003726839.1|	-	0.2	11.1	3.4	1.9	8.0	3.4	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-tcix	PF14952.6	gi|298675089|ref|YP_003726839.1|	-	0.23	11.1	1.1	0.54	9.9	0.1	2.1	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Auto_anti-p27	PF06677.12	gi|298675089|ref|YP_003726839.1|	-	0.33	11.2	2.3	2.9	8.1	0.9	2.3	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
A2L_zn_ribbon	PF08792.10	gi|298675089|ref|YP_003726839.1|	-	0.37	10.6	2.5	5.6	6.8	2.5	2.4	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
Nudix_N_2	PF14803.6	gi|298675089|ref|YP_003726839.1|	-	1.8	8.6	4.1	2.1	8.4	0.5	2.9	2	1	0	2	2	2	0	Nudix	N-terminal
RRXRR	PF14239.6	gi|298675090|ref|YP_003726840.1|	-	5.6e-64	215.2	4.4	9.7e-64	214.4	4.4	1.4	1	0	0	1	1	1	1	RRXRR	protein
HNH	PF01844.23	gi|298675090|ref|YP_003726840.1|	-	8e-11	41.9	7.6	1.8e-10	40.8	7.6	1.7	1	0	0	1	1	1	1	HNH	endonuclease
HNH_5	PF14279.6	gi|298675090|ref|YP_003726840.1|	-	3.1e-06	26.9	4.6	7.7e-06	25.7	4.6	1.7	1	0	0	1	1	1	1	HNH	endonuclease
HNH_2	PF13391.6	gi|298675090|ref|YP_003726840.1|	-	0.00019	21.5	0.4	0.00074	19.6	0.4	2.0	1	1	0	1	1	1	1	HNH	endonuclease
zf_UBZ	PF18439.1	gi|298675090|ref|YP_003726840.1|	-	4.1	7.1	6.5	1.3	8.7	2.8	2.0	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
PAS_9	PF13426.7	gi|298675091|ref|YP_003726841.1|	-	7.4e-57	190.0	5.7	3.4e-12	46.5	0.0	6.6	6	0	0	6	6	6	6	PAS	domain
PAS	PF00989.25	gi|298675091|ref|YP_003726841.1|	-	8.5e-50	167.5	0.0	2.2e-10	40.5	0.0	7.0	6	1	0	6	6	6	6	PAS	fold
PAS_4	PF08448.10	gi|298675091|ref|YP_003726841.1|	-	1.6e-45	153.8	0.0	8.9e-12	45.2	0.0	7.7	6	2	0	6	6	6	6	PAS	fold
PAS_8	PF13188.7	gi|298675091|ref|YP_003726841.1|	-	4.3e-39	131.9	0.1	9.2e-09	35.1	0.0	6.4	6	0	0	6	6	6	6	PAS	domain
HATPase_c	PF02518.26	gi|298675091|ref|YP_003726841.1|	-	1.3e-31	109.4	0.0	3.1e-31	108.2	0.0	1.7	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_3	PF08447.12	gi|298675091|ref|YP_003726841.1|	-	5.4e-23	81.1	0.1	0.0002	21.5	0.0	6.5	5	1	0	5	5	5	4	PAS	fold
HisKA	PF00512.25	gi|298675091|ref|YP_003726841.1|	-	3.9e-21	74.9	0.1	3.9e-21	74.9	0.1	2.2	3	0	0	3	3	3	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_7	PF12860.7	gi|298675091|ref|YP_003726841.1|	-	3.6e-08	33.6	4.3	1.4	9.1	0.0	7.5	8	1	0	8	8	8	1	PAS	fold
MEKHLA	PF08670.11	gi|298675091|ref|YP_003726841.1|	-	4.7e-05	23.3	0.2	0.11	12.4	0.1	4.0	3	1	1	4	4	4	1	MEKHLA	domain
PAS_12	PF18095.1	gi|298675091|ref|YP_003726841.1|	-	0.001	18.7	1.7	7.2	6.2	0.0	4.7	6	0	0	6	6	6	1	UPF0242	C-terminal	PAS-like	domain
HATPase_c_5	PF14501.6	gi|298675091|ref|YP_003726841.1|	-	0.018	15.0	0.0	0.089	12.7	0.0	2.2	2	0	0	2	2	2	0	GHKL	domain
HATPase_c_2	PF13581.6	gi|298675091|ref|YP_003726841.1|	-	0.096	12.6	0.0	0.24	11.4	0.0	1.6	1	0	0	1	1	1	0	Histidine	kinase-like	ATPase	domain
PAS_3	PF08447.12	gi|298675092|ref|YP_003726842.1|	-	5.9e-42	141.9	1.1	1e-18	67.4	0.5	4.2	4	0	0	4	4	4	2	PAS	fold
PAS_9	PF13426.7	gi|298675092|ref|YP_003726842.1|	-	3.8e-35	120.3	8.1	4.9e-12	46.0	0.0	4.6	4	0	0	4	4	4	4	PAS	domain
PAS_4	PF08448.10	gi|298675092|ref|YP_003726842.1|	-	1e-31	109.4	0.0	1.9e-10	40.9	0.0	4.4	4	0	0	4	4	4	4	PAS	fold
HisKA_2	PF07568.12	gi|298675092|ref|YP_003726842.1|	-	4.7e-29	100.3	5.1	4.7e-29	100.3	5.1	2.4	2	0	0	2	2	1	1	Histidine	kinase
PAS	PF00989.25	gi|298675092|ref|YP_003726842.1|	-	6.6e-21	74.4	0.1	1.8e-13	50.5	0.0	4.6	4	0	0	4	4	4	2	PAS	fold
PAS_11	PF14598.6	gi|298675092|ref|YP_003726842.1|	-	2.4e-07	30.9	0.0	3.4e-05	23.9	0.0	2.9	2	0	0	2	2	2	1	PAS	domain
HATPase_c	PF02518.26	gi|298675092|ref|YP_003726842.1|	-	1.6e-06	28.6	0.0	1.2e-05	25.7	0.0	2.4	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HWE_HK	PF07536.14	gi|298675092|ref|YP_003726842.1|	-	4.6e-06	27.2	1.8	6.2e-06	26.8	0.3	2.0	2	0	0	2	2	1	1	HWE	histidine	kinase
PAS_8	PF13188.7	gi|298675092|ref|YP_003726842.1|	-	8.4e-05	22.5	0.0	0.32	11.1	0.0	4.4	4	0	0	4	4	4	1	PAS	domain
HATPase_c_2	PF13581.6	gi|298675092|ref|YP_003726842.1|	-	8.8e-05	22.5	0.0	0.00018	21.5	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
Gluconate_2-dh3	PF13618.6	gi|298675092|ref|YP_003726842.1|	-	0.00033	20.9	0.1	0.0023	18.2	0.1	2.2	2	0	0	2	2	2	1	Gluconate	2-dehydrogenase	subunit	3
PAS_10	PF13596.6	gi|298675092|ref|YP_003726842.1|	-	0.0016	19.0	1.8	0.19	12.3	0.0	3.9	4	1	0	4	4	4	1	PAS	domain
U1snRNP70_N	PF12220.8	gi|298675092|ref|YP_003726842.1|	-	0.0067	17.0	7.7	0.019	15.6	0.8	2.8	2	0	0	2	2	2	1	U1	small	nuclear	ribonucleoprotein	of	70kDa	MW	N	terminal
PAS_7	PF12860.7	gi|298675092|ref|YP_003726842.1|	-	0.022	14.9	3.1	0.61	10.3	0.0	4.4	6	1	0	6	6	6	0	PAS	fold
HATPase_c_3	PF13589.6	gi|298675092|ref|YP_003726842.1|	-	0.061	13.1	0.3	2.1	8.2	0.0	2.5	2	0	0	2	2	2	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
CorA	PF01544.18	gi|298675092|ref|YP_003726842.1|	-	0.093	12.0	4.8	0.28	10.4	4.8	1.9	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
SPOB_a	PF14689.6	gi|298675092|ref|YP_003726842.1|	-	0.19	11.4	3.5	0.24	11.2	0.4	2.8	3	0	0	3	3	2	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
OrfB_IS605	PF01385.19	gi|298675093|ref|YP_003726843.1|	-	3.4e-28	98.3	2.0	8e-28	97.1	2.0	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675093|ref|YP_003726843.1|	-	1.4e-23	82.6	0.3	2.8e-23	81.6	0.3	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298675093|ref|YP_003726843.1|	-	4.4e-20	70.9	1.4	9.3e-20	69.8	1.4	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298675093|ref|YP_003726843.1|	-	0.0065	16.6	0.3	0.016	15.3	0.3	1.6	1	0	0	1	1	1	1	Piccolo	Zn-finger
Phage_GP20	PF06810.11	gi|298675093|ref|YP_003726843.1|	-	0.046	13.5	4.4	0.29	10.9	1.7	2.4	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
LemA	PF04011.12	gi|298675093|ref|YP_003726843.1|	-	0.047	13.5	1.9	0.43	10.4	0.3	2.4	2	0	0	2	2	2	0	LemA	family
Ima1_N	PF09779.9	gi|298675093|ref|YP_003726843.1|	-	1	10.2	4.1	1.5	9.7	0.5	2.5	2	0	0	2	2	2	0	Ima1	N-terminal	domain
MapZ_EC1	PF18041.1	gi|298675093|ref|YP_003726843.1|	-	1	9.6	7.8	0.26	11.5	1.8	2.3	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
Cadherin_C_2	PF16492.5	gi|298675094|ref|YP_003726844.1|	-	0.0011	19.7	0.0	0.0016	19.2	0.0	1.3	1	0	0	1	1	1	1	Cadherin	cytoplasmic	C-terminal
OrfB_IS605	PF01385.19	gi|298675096|ref|YP_003726846.1|	-	5.6e-24	84.7	1.7	1.1e-23	83.7	0.0	2.3	3	1	0	3	3	3	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675096|ref|YP_003726846.1|	-	1.5e-10	40.8	0.2	4.6e-10	39.3	0.1	1.9	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
Pentapeptide_2	PF01469.18	gi|298675096|ref|YP_003726846.1|	-	0.00014	21.7	2.2	0.00021	21.1	0.7	2.1	2	0	0	2	2	2	1	Pentapeptide	repeats	(8	copies)
DUF919	PF06034.11	gi|298675096|ref|YP_003726846.1|	-	0.0047	16.7	0.5	0.012	15.4	0.5	1.7	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
DUF5320	PF17253.2	gi|298675097|ref|YP_003726847.1|	-	1.5e-15	58.0	6.9	1.8e-15	57.8	6.9	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5320)
DUF2612	PF11041.8	gi|298675097|ref|YP_003726847.1|	-	0.052	13.5	0.1	0.059	13.3	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2612)
Radical_SAM	PF04055.21	gi|298675098|ref|YP_003726848.1|	-	6.2e-10	39.7	0.1	1.8e-09	38.2	0.1	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|298675098|ref|YP_003726848.1|	-	0.00063	19.9	0.6	0.0021	18.2	0.6	1.8	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
BP28CT	PF08146.12	gi|298675098|ref|YP_003726848.1|	-	0.037	13.9	0.1	0.082	12.7	0.0	1.6	2	0	0	2	2	2	0	BP28CT	(NUC211)	domain
Mt_ATP-synt_D	PF05873.12	gi|298675098|ref|YP_003726848.1|	-	0.054	13.4	1.1	0.17	11.7	0.1	2.2	2	1	1	3	3	3	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
DUF134	PF02001.16	gi|298675099|ref|YP_003726849.1|	-	9.6e-21	74.2	0.0	1.2e-20	73.8	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF134
IBR	PF01485.21	gi|298675099|ref|YP_003726849.1|	-	0.025	14.8	4.4	0.04	14.1	4.4	1.4	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
Phage_NinH	PF06322.11	gi|298675099|ref|YP_003726849.1|	-	0.074	12.9	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	Phage	NinH	protein
HTH_30	PF13556.6	gi|298675099|ref|YP_003726849.1|	-	0.14	12.0	0.0	0.21	11.4	0.0	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
UPF0547	PF10571.9	gi|298675099|ref|YP_003726849.1|	-	1.1	9.5	10.4	1.7	8.8	1.6	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
HypA	PF01155.19	gi|298675099|ref|YP_003726849.1|	-	2.3	8.3	8.1	7	6.7	8.1	1.9	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
OrfB_Zn_ribbon	PF07282.11	gi|298675100|ref|YP_003726850.1|	-	6.8e-25	86.8	3.5	1.5e-24	85.7	1.0	2.6	2	1	1	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675100|ref|YP_003726850.1|	-	3.5e-10	40.2	1.5	3.5e-10	40.2	1.5	1.6	2	0	0	2	2	2	1	Probable	transposase
HypA	PF01155.19	gi|298675100|ref|YP_003726850.1|	-	0.067	13.2	0.1	0.13	12.3	0.1	1.5	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
UPF0547	PF10571.9	gi|298675100|ref|YP_003726850.1|	-	0.15	12.2	1.6	0.89	9.7	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DNA_RNApol_7kD	PF03604.13	gi|298675100|ref|YP_003726850.1|	-	0.8	9.4	6.5	3	7.6	6.5	2.0	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn_Tnp_IS1595	PF12760.7	gi|298675100|ref|YP_003726850.1|	-	1	9.4	4.8	2.7	8.0	4.8	1.7	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF2387	PF09526.10	gi|298675100|ref|YP_003726850.1|	-	1.4	9.1	5.9	13	6.0	1.9	3.0	2	1	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Rubredoxin_2	PF18073.1	gi|298675100|ref|YP_003726850.1|	-	2.2	8.1	4.5	22	4.9	0.4	2.4	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
DUF790	PF05626.11	gi|298675101|ref|YP_003726851.1|	-	1.1e-129	432.6	1.0	1.4e-129	432.2	1.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF790)
PI3K_p85B	PF02192.16	gi|298675101|ref|YP_003726851.1|	-	0.77	9.5	3.7	1	9.1	0.1	2.9	3	1	1	4	4	4	0	PI3-kinase	family,	p85-binding	domain
GGGtGRT	PF14057.6	gi|298675101|ref|YP_003726851.1|	-	0.94	8.4	2.0	12	4.7	0.2	2.2	2	0	0	2	2	2	0	GGGtGRT	protein
ResIII	PF04851.15	gi|298675102|ref|YP_003726852.1|	-	1e-26	94.0	0.1	1.2e-25	90.5	0.0	2.5	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
ERCC3_RAD25_C	PF16203.5	gi|298675102|ref|YP_003726852.1|	-	3.3e-19	69.1	0.3	6.5e-19	68.1	0.3	1.4	1	0	0	1	1	1	1	ERCC3/RAD25/XPB	C-terminal	helicase
XPB_DRD	PF18458.1	gi|298675102|ref|YP_003726852.1|	-	1.6e-16	59.9	0.0	4.2e-16	58.5	0.0	1.8	1	0	0	1	1	1	1	Xeroderma	pigmentosum	group	B	helicase	damage	recognition	domain
Helicase_C	PF00271.31	gi|298675102|ref|YP_003726852.1|	-	1.9e-15	57.2	1.0	2.2e-14	53.8	0.1	2.6	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|298675102|ref|YP_003726852.1|	-	4.3e-08	33.1	0.0	1.4e-07	31.4	0.0	1.9	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
PhoH	PF02562.16	gi|298675102|ref|YP_003726852.1|	-	0.087	12.3	0.0	0.17	11.3	0.0	1.5	1	0	0	1	1	1	0	PhoH-like	protein
Usp	PF00582.26	gi|298675103|ref|YP_003726853.1|	-	2.6e-37	128.5	0.1	2.9e-37	128.3	0.1	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
VWA	PF00092.28	gi|298675103|ref|YP_003726853.1|	-	0.031	14.5	0.1	0.077	13.2	0.0	1.7	1	1	1	2	2	2	0	von	Willebrand	factor	type	A	domain
DXP_reductoisom	PF02670.16	gi|298675103|ref|YP_003726853.1|	-	0.034	14.9	0.1	0.061	14.0	0.1	1.4	1	1	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
DNA_photolyase	PF00875.18	gi|298675103|ref|YP_003726853.1|	-	0.2	11.6	0.0	0.41	10.6	0.0	1.5	1	1	0	1	1	1	0	DNA	photolyase
VCBS	PF13517.6	gi|298675104|ref|YP_003726854.1|	-	3.8e-11	43.4	2.9	7.4e-11	42.5	2.9	1.5	1	0	0	1	1	1	1	Repeat	domain	in	Vibrio,	Colwellia,	Bradyrhizobium	and	Shewanella
FG-GAP	PF01839.23	gi|298675104|ref|YP_003726854.1|	-	4.2e-09	36.4	1.9	9.8e-05	22.4	0.1	2.5	2	0	0	2	2	2	2	FG-GAP	repeat
Dockerin_1	PF00404.18	gi|298675104|ref|YP_003726854.1|	-	0.0016	18.5	0.7	1.8	8.8	0.0	2.5	3	0	0	3	3	3	2	Dockerin	type	I	domain
TcdB_toxin_midN	PF12256.8	gi|298675104|ref|YP_003726854.1|	-	0.0022	17.4	0.5	0.14	11.6	0.1	2.3	1	1	1	2	2	2	2	Insecticide	toxin	TcdB	middle/N-terminal	region
PliI	PF16743.5	gi|298675104|ref|YP_003726854.1|	-	0.017	14.8	0.2	0.13	12.0	0.1	2.0	1	1	0	1	1	1	0	Periplasmic	lysozyme	inhibitor	of	I-type	lysozyme
DUF2148	PF09918.9	gi|298675105|ref|YP_003726855.1|	-	0.017	15.1	0.1	0.019	15.0	0.1	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	containing	a	ferredoxin	domain	(DUF2148)
TrmB	PF01978.19	gi|298675106|ref|YP_003726856.1|	-	1.9e-23	82.1	0.0	3.4e-23	81.3	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|298675106|ref|YP_003726856.1|	-	0.0024	17.6	0.0	0.004	16.9	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Regulator_TrmB	PF11495.8	gi|298675106|ref|YP_003726856.1|	-	0.0028	16.9	0.1	0.0043	16.3	0.1	1.3	1	0	0	1	1	1	1	Archaeal	transcriptional	regulator	TrmB
HTH_24	PF13412.6	gi|298675106|ref|YP_003726856.1|	-	0.0032	17.0	1.3	0.02	14.4	0.0	3.0	4	0	0	4	4	4	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|298675106|ref|YP_003726856.1|	-	0.0095	15.9	0.0	0.026	14.4	0.0	1.8	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.20	gi|298675106|ref|YP_003726856.1|	-	0.032	14.6	0.0	0.082	13.3	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
MarR_2	PF12802.7	gi|298675106|ref|YP_003726856.1|	-	0.059	13.3	0.0	0.11	12.3	0.0	1.5	1	0	0	1	1	1	0	MarR	family
HTH_20	PF12840.7	gi|298675106|ref|YP_003726856.1|	-	0.075	13.1	0.0	0.15	12.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
ABC_tran	PF00005.27	gi|298675107|ref|YP_003726857.1|	-	1.7e-35	122.6	0.0	2.7e-35	121.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675107|ref|YP_003726857.1|	-	4.6e-10	39.8	3.2	1.6e-06	28.2	0.1	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|298675107|ref|YP_003726857.1|	-	1.9e-06	28.5	1.0	3e-06	27.9	1.0	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|298675107|ref|YP_003726857.1|	-	7.3e-05	22.6	0.6	0.054	13.2	0.5	2.3	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA	PF00004.29	gi|298675107|ref|YP_003726857.1|	-	0.00059	20.3	0.1	0.0038	17.7	0.1	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.6	gi|298675107|ref|YP_003726857.1|	-	0.00062	19.5	0.1	0.0013	18.4	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Rad17	PF03215.15	gi|298675107|ref|YP_003726857.1|	-	0.00071	19.6	0.1	0.0013	18.7	0.0	1.5	2	0	0	2	2	2	1	Rad17	P-loop	domain
AAA_22	PF13401.6	gi|298675107|ref|YP_003726857.1|	-	0.0013	19.0	0.2	0.0046	17.2	0.2	1.9	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.19	gi|298675107|ref|YP_003726857.1|	-	0.0025	17.3	0.1	0.0058	16.1	0.1	1.6	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_27	PF13514.6	gi|298675107|ref|YP_003726857.1|	-	0.01	15.4	0.0	0.015	14.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|298675107|ref|YP_003726857.1|	-	0.019	14.6	0.3	0.14	11.7	0.0	2.0	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_13	PF13166.6	gi|298675107|ref|YP_003726857.1|	-	0.026	13.2	0.0	1.7	7.2	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|298675107|ref|YP_003726857.1|	-	0.035	13.8	0.0	0.1	12.3	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|298675107|ref|YP_003726857.1|	-	0.09	12.7	0.8	0.39	10.6	0.0	2.2	2	1	1	3	3	3	0	RsgA	GTPase
TNT	PF14021.6	gi|298675107|ref|YP_003726857.1|	-	0.1	13.2	0.0	0.23	12.1	0.0	1.6	1	0	0	1	1	1	0	Tuberculosis	necrotizing	toxin
AAA_28	PF13521.6	gi|298675107|ref|YP_003726857.1|	-	0.13	12.6	0.9	1.5	9.1	0.2	2.5	1	1	1	3	3	3	0	AAA	domain
AAA_33	PF13671.6	gi|298675107|ref|YP_003726857.1|	-	0.22	11.7	0.3	6.3	7.0	0.1	2.3	1	1	0	2	2	2	0	AAA	domain
ABC2_membrane	PF01061.24	gi|298675108|ref|YP_003726858.1|	-	5.5e-39	133.8	15.4	5.5e-39	133.8	15.4	1.6	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|298675108|ref|YP_003726858.1|	-	1.1e-16	60.9	25.1	1.5e-16	60.4	25.1	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|298675108|ref|YP_003726858.1|	-	4.1e-09	36.1	13.4	4.1e-09	36.1	13.4	2.1	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
CbtB	PF09489.10	gi|298675108|ref|YP_003726858.1|	-	4.9	7.3	5.9	35	4.6	0.2	3.2	3	0	0	3	3	3	0	Probable	cobalt	transporter	subunit	(CbtB)
FrhB_FdhB_C	PF04432.13	gi|298675109|ref|YP_003726859.1|	-	2.5e-37	128.1	0.0	5.9e-37	126.9	0.0	1.7	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
NIR_SIR	PF01077.22	gi|298675109|ref|YP_003726859.1|	-	1.7e-28	99.1	0.1	3.2e-28	98.2	0.1	1.4	1	0	0	1	1	1	1	Nitrite	and	sulphite	reductase	4Fe-4S	domain
FrhB_FdhB_N	PF04422.13	gi|298675109|ref|YP_003726859.1|	-	1.9e-22	79.2	0.0	3.9e-22	78.2	0.0	1.5	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4	PF00037.27	gi|298675109|ref|YP_003726859.1|	-	8.1e-17	60.3	39.4	2.9e-07	30.0	1.3	5.4	6	0	0	6	6	5	3	4Fe-4S	binding	domain
NIR_SIR_ferr	PF03460.17	gi|298675109|ref|YP_003726859.1|	-	1.2e-12	47.4	0.0	3.2e-12	46.1	0.0	1.7	1	0	0	1	1	1	1	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
Fer4_7	PF12838.7	gi|298675109|ref|YP_003726859.1|	-	4.2e-10	40.1	31.1	0.001	19.6	4.6	5.0	4	2	0	4	4	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298675109|ref|YP_003726859.1|	-	8.3e-10	38.3	21.8	3.1e-05	23.8	3.2	4.7	6	0	0	6	6	4	3	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298675109|ref|YP_003726859.1|	-	1.7e-08	34.4	31.2	0.00059	19.9	0.1	4.3	4	1	1	5	5	3	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298675109|ref|YP_003726859.1|	-	3.5e-08	33.5	26.9	0.0026	17.9	3.8	3.8	4	0	0	4	4	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675109|ref|YP_003726859.1|	-	5.2e-08	32.9	31.0	5.3e-06	26.5	9.9	4.2	3	1	2	5	5	5	4	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675109|ref|YP_003726859.1|	-	1.3e-06	28.1	39.9	0.00076	19.4	1.6	5.4	6	0	0	6	6	5	3	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|298675109|ref|YP_003726859.1|	-	4.3e-05	24.0	20.7	0.029	14.9	0.1	4.6	4	0	0	4	4	4	3	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_8	PF13183.6	gi|298675109|ref|YP_003726859.1|	-	0.00055	20.3	25.9	0.036	14.5	0.8	5.0	5	1	0	5	5	5	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298675109|ref|YP_003726859.1|	-	0.0006	20.3	26.1	0.054	14.0	0.6	5.0	5	1	0	5	5	5	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675109|ref|YP_003726859.1|	-	0.00073	20.4	30.2	0.49	11.4	7.7	5.3	4	2	1	5	5	5	3	4Fe-4S	double	cluster	binding	domain
Fer4_15	PF13459.6	gi|298675109|ref|YP_003726859.1|	-	0.00081	20.1	31.1	0.033	14.9	1.3	4.6	4	2	1	5	5	4	3	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.6	gi|298675109|ref|YP_003726859.1|	-	0.021	15.0	1.4	0.021	15.0	1.4	2.8	3	0	0	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298675109|ref|YP_003726859.1|	-	0.028	14.9	38.3	0.11	13.1	2.4	5.7	6	0	0	6	6	5	0	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|298675109|ref|YP_003726859.1|	-	0.03	15.1	2.5	0.03	15.1	2.5	4.4	4	1	1	5	5	4	0	4Fe-4S	dicluster	domain
PTH2	PF01981.16	gi|298675110|ref|YP_003726860.1|	-	4.1e-07	30.3	0.0	4.7e-07	30.1	0.0	1.1	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Ribosomal_S2	PF00318.20	gi|298675110|ref|YP_003726860.1|	-	0.00095	18.4	0.0	0.0011	18.3	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S2
PA28_alpha	PF02251.18	gi|298675110|ref|YP_003726860.1|	-	0.14	12.2	0.3	0.33	11.0	0.1	1.7	2	0	0	2	2	2	0	Proteasome	activator	pa28	alpha	subunit
Methyltransf_25	PF13649.6	gi|298675111|ref|YP_003726861.1|	-	1.2e-16	61.1	0.0	2.5e-16	60.1	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298675111|ref|YP_003726861.1|	-	8.5e-15	55.2	0.0	1.4e-14	54.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298675111|ref|YP_003726861.1|	-	5.2e-13	49.1	0.0	2.1e-12	47.1	0.0	1.8	1	1	1	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298675111|ref|YP_003726861.1|	-	3.3e-09	36.4	0.0	1.6e-08	34.2	0.0	1.9	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.12	gi|298675111|ref|YP_003726861.1|	-	9.2e-07	29.5	0.0	1.5e-06	28.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|298675111|ref|YP_003726861.1|	-	8.4e-06	25.4	0.0	1.5e-05	24.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_4	PF02390.17	gi|298675111|ref|YP_003726861.1|	-	4.1e-05	23.1	0.0	8.3e-05	22.1	0.0	1.5	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_23	PF13489.6	gi|298675111|ref|YP_003726861.1|	-	6.5e-05	22.8	0.0	8.9e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|298675111|ref|YP_003726861.1|	-	0.0002	21.3	0.0	0.00094	19.1	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_PK	PF05891.12	gi|298675111|ref|YP_003726861.1|	-	0.00058	19.4	0.0	0.00074	19.1	0.0	1.2	1	0	0	1	1	1	1	AdoMet	dependent	proline	di-methyltransferase
Methyltransf_24	PF13578.6	gi|298675111|ref|YP_003726861.1|	-	0.0011	20.0	0.0	0.0019	19.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|298675111|ref|YP_003726861.1|	-	0.004	16.8	0.0	0.0066	16.1	0.0	1.3	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_15	PF09445.10	gi|298675111|ref|YP_003726861.1|	-	0.013	15.0	0.0	0.015	14.9	0.0	1.3	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_16	PF10294.9	gi|298675111|ref|YP_003726861.1|	-	0.027	14.2	0.0	0.13	12.0	0.0	1.9	2	0	0	2	2	2	0	Lysine	methyltransferase
PrmA	PF06325.13	gi|298675111|ref|YP_003726861.1|	-	0.044	13.2	0.0	0.063	12.7	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
PCMT	PF01135.19	gi|298675111|ref|YP_003726861.1|	-	0.087	12.6	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF938	PF06080.12	gi|298675111|ref|YP_003726861.1|	-	0.091	12.5	0.0	0.12	12.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF938)
Met_10	PF02475.16	gi|298675111|ref|YP_003726861.1|	-	0.13	12.0	0.0	0.19	11.4	0.0	1.2	1	0	0	1	1	1	0	Met-10+	like-protein
UPF0020	PF01170.18	gi|298675111|ref|YP_003726861.1|	-	0.13	11.9	0.0	0.23	11.1	0.0	1.4	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
RrnaAD	PF00398.20	gi|298675111|ref|YP_003726861.1|	-	0.14	11.2	0.0	0.24	10.4	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
ATPase_2	PF01637.18	gi|298675112|ref|YP_003726862.1|	-	7.5e-19	68.6	4.1	1.4e-17	64.4	1.5	2.9	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
DUF234	PF03008.14	gi|298675112|ref|YP_003726862.1|	-	2.5e-18	66.3	0.5	1e-17	64.4	0.3	2.1	2	0	0	2	2	2	1	Archaea	bacterial	proteins	of	unknown	function
AAA_14	PF13173.6	gi|298675112|ref|YP_003726862.1|	-	3e-12	46.7	2.3	5.7e-12	45.8	0.9	2.2	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|298675112|ref|YP_003726862.1|	-	6.8e-08	33.1	0.0	1e-05	26.0	0.0	2.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|298675112|ref|YP_003726862.1|	-	5.6e-07	29.9	0.0	2e-06	28.1	0.0	1.9	3	0	0	3	3	3	1	AAA	domain
TniB	PF05621.11	gi|298675112|ref|YP_003726862.1|	-	0.002	17.6	0.9	0.05	13.0	0.0	2.8	3	0	0	3	3	3	1	Bacterial	TniB	protein
DUF4143	PF13635.6	gi|298675112|ref|YP_003726862.1|	-	0.0075	16.4	0.3	0.028	14.6	0.0	2.2	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4143)
HTH_5	PF01022.20	gi|298675112|ref|YP_003726862.1|	-	0.013	15.3	1.0	0.028	14.3	0.2	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Roc	PF08477.13	gi|298675112|ref|YP_003726862.1|	-	0.015	15.5	0.4	0.055	13.7	0.0	2.1	2	1	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
UPF0102	PF02021.17	gi|298675112|ref|YP_003726862.1|	-	0.027	14.7	0.0	0.056	13.7	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0102
DUF4702	PF15774.5	gi|298675112|ref|YP_003726862.1|	-	0.031	13.2	0.0	0.047	12.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4702)
HSDR_N_2	PF13588.6	gi|298675112|ref|YP_003726862.1|	-	0.051	13.6	0.1	1.9	8.5	0.0	2.5	2	0	0	2	2	2	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
NFACT-R_1	PF05670.13	gi|298675112|ref|YP_003726862.1|	-	0.097	13.3	0.0	0.2	12.3	0.0	1.5	1	0	0	1	1	1	0	NFACT	protein	RNA	binding	domain
NosD	PF05048.13	gi|298675114|ref|YP_003726864.1|	-	8.5e-14	51.4	29.6	7.7e-08	31.9	7.2	3.0	1	1	2	3	3	3	2	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|298675114|ref|YP_003726864.1|	-	4.3e-11	42.9	46.2	2.5e-07	30.7	39.6	3.2	2	1	1	3	3	3	2	Right	handed	beta	helix	region
Pectinesterase	PF01095.19	gi|298675114|ref|YP_003726864.1|	-	0.00086	18.1	0.0	0.0016	17.2	0.0	1.4	1	0	0	1	1	1	1	Pectinesterase
Polbeta	PF18765.1	gi|298675115|ref|YP_003726865.1|	-	2.9e-20	72.1	2.5	4.2e-20	71.6	2.5	1.2	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
NTP_transf_2	PF01909.23	gi|298675115|ref|YP_003726865.1|	-	4.6e-10	39.7	1.3	6.5e-10	39.2	1.3	1.4	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
Adenyl_cycl_N	PF12633.7	gi|298675115|ref|YP_003726865.1|	-	0.02	14.8	0.0	0.029	14.3	0.0	1.5	1	1	0	1	1	1	0	Adenylate	cyclase	NT	domain
DUF234	PF03008.14	gi|298675116|ref|YP_003726866.1|	-	2.1e-28	98.6	4.0	2.5e-28	98.4	0.9	2.4	2	0	0	2	2	2	1	Archaea	bacterial	proteins	of	unknown	function
ATPase_2	PF01637.18	gi|298675116|ref|YP_003726866.1|	-	1.5e-17	64.3	2.4	1.2e-15	58.1	2.4	2.5	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_14	PF13173.6	gi|298675116|ref|YP_003726866.1|	-	9.8e-09	35.3	0.1	3.6e-08	33.5	0.1	2.0	1	0	0	1	1	1	1	AAA	domain
Mrr_cat	PF04471.12	gi|298675116|ref|YP_003726866.1|	-	1.3e-05	25.1	0.0	2.7e-05	24.1	0.0	1.5	1	0	0	1	1	1	1	Restriction	endonuclease
AAA_22	PF13401.6	gi|298675116|ref|YP_003726866.1|	-	0.00027	21.2	0.0	0.00082	19.7	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
HTH_45	PF14947.6	gi|298675116|ref|YP_003726866.1|	-	0.0095	15.9	1.2	0.034	14.1	0.1	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix
Roc	PF08477.13	gi|298675116|ref|YP_003726866.1|	-	0.06	13.6	0.2	0.28	11.4	0.2	2.1	1	1	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_16	PF13191.6	gi|298675116|ref|YP_003726866.1|	-	0.075	13.4	0.3	2.5	8.4	0.1	2.7	2	1	0	2	2	2	0	AAA	ATPase	domain
SatD	PF16264.5	gi|298675116|ref|YP_003726866.1|	-	0.13	11.9	3.0	0.42	10.2	0.3	2.5	2	0	0	2	2	2	0	SatD	family	(SatD)
DUF86	PF01934.17	gi|298675117|ref|YP_003726867.1|	-	3.1e-18	65.8	0.7	3.7e-18	65.5	0.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF86
Phage_TAC_14	PF16462.5	gi|298675117|ref|YP_003726867.1|	-	0.052	13.8	0.0	0.071	13.3	0.0	1.3	1	0	0	1	1	1	0	Phage	tail	assembly	chaperone	protein,	TAC
NTP_transf_2	PF01909.23	gi|298675118|ref|YP_003726868.1|	-	4.4e-17	62.2	0.8	4.8e-17	62.0	0.8	1.0	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Polbeta	PF18765.1	gi|298675118|ref|YP_003726868.1|	-	3.3e-15	56.0	1.0	3.6e-15	55.8	1.0	1.1	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
DNA_pol_B_palm	PF14792.6	gi|298675118|ref|YP_003726868.1|	-	0.027	14.7	0.0	0.03	14.5	0.0	1.2	1	0	0	1	1	1	0	DNA	polymerase	beta	palm
SatD	PF16264.5	gi|298675119|ref|YP_003726869.1|	-	0.098	12.2	0.0	0.11	12.1	0.0	1.1	1	0	0	1	1	1	0	SatD	family	(SatD)
OrfB_IS605	PF01385.19	gi|298675120|ref|YP_003726870.1|	-	4.5e-23	81.7	0.2	2.8e-22	79.2	0.0	2.4	2	1	1	3	3	3	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675120|ref|YP_003726870.1|	-	4.8e-10	39.2	0.1	1.6e-09	37.6	0.1	1.9	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF919	PF06034.11	gi|298675120|ref|YP_003726870.1|	-	0.00062	19.6	0.3	0.0017	18.2	0.3	1.7	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
RuvX	PF03652.15	gi|298675120|ref|YP_003726870.1|	-	0.038	14.4	0.0	0.085	13.2	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	resolvase
OrfB_IS605	PF01385.19	gi|298675122|ref|YP_003726872.1|	-	5e-23	81.6	0.3	1.7e-22	79.9	0.0	2.0	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675122|ref|YP_003726872.1|	-	1.2e-10	41.2	0.3	4.9e-10	39.2	0.1	2.2	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
DUF919	PF06034.11	gi|298675122|ref|YP_003726872.1|	-	0.0013	18.5	0.6	0.0037	17.1	0.6	1.8	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
RuvX	PF03652.15	gi|298675122|ref|YP_003726872.1|	-	0.034	14.5	0.0	0.079	13.3	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	resolvase
NTP_transf_2	PF01909.23	gi|298675123|ref|YP_003726873.1|	-	9.3e-12	45.1	0.2	1.2e-11	44.8	0.2	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Polbeta	PF18765.1	gi|298675123|ref|YP_003726873.1|	-	1.6e-10	41.0	0.1	1.8e-10	40.8	0.1	1.1	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
DNA_pol_B_palm	PF14792.6	gi|298675123|ref|YP_003726873.1|	-	0.044	14.0	0.0	0.058	13.6	0.0	1.2	1	0	0	1	1	1	0	DNA	polymerase	beta	palm
ParE_toxin	PF05016.15	gi|298675124|ref|YP_003726874.1|	-	1.6e-10	41.5	0.1	1.9e-10	41.2	0.1	1.1	1	0	0	1	1	1	1	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
Gp49	PF05973.14	gi|298675124|ref|YP_003726874.1|	-	0.00042	20.4	0.0	0.00051	20.1	0.0	1.1	1	0	0	1	1	1	1	Phage	derived	protein	Gp49-like	(DUF891)
ParE-like_toxin	PF15781.5	gi|298675124|ref|YP_003726874.1|	-	0.015	15.3	0.1	0.025	14.5	0.1	1.5	1	1	0	1	1	1	0	ParE-like	toxin	of	type	II	bacterial	toxin-antitoxin	system
SPOR	PF05036.13	gi|298675124|ref|YP_003726874.1|	-	0.15	12.4	0.0	0.22	12.0	0.0	1.3	1	0	0	1	1	1	0	Sporulation	related	domain
DUF4158	PF13700.6	gi|298675125|ref|YP_003726875.1|	-	0.065	13.1	0.1	0.072	12.9	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4158)
DUF4625	PF15418.6	gi|298675126|ref|YP_003726876.1|	-	0.036	14.3	2.0	0.078	13.2	0.5	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4625)
SWC7	PF17330.2	gi|298675126|ref|YP_003726876.1|	-	0.04	14.0	2.4	0.058	13.5	0.3	2.5	2	0	0	2	2	2	0	SWR1	chromatin-remodelling	complex,	sub-unit	Swc7
TPR_7	PF13176.6	gi|298675126|ref|YP_003726876.1|	-	0.16	12.1	0.4	8.5	6.7	0.0	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|298675126|ref|YP_003726876.1|	-	0.26	11.5	2.0	5.7	7.3	0.3	3.1	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|298675126|ref|YP_003726876.1|	-	0.31	11.4	2.2	1.5	9.2	0.2	3.2	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|298675126|ref|YP_003726876.1|	-	0.4	10.6	4.8	4.5	7.3	0.2	3.2	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Syntaxin-6_N	PF09177.11	gi|298675126|ref|YP_003726876.1|	-	0.72	10.4	6.4	0.84	10.2	0.1	3.5	3	0	0	3	3	3	0	Syntaxin	6,	N-terminal
TPR_11	PF13414.6	gi|298675126|ref|YP_003726876.1|	-	1.5	8.5	4.6	13	5.5	0.1	3.6	4	0	0	4	4	4	0	TPR	repeat
DUF724	PF05266.14	gi|298675126|ref|YP_003726876.1|	-	1.8	8.4	12.0	5.3	6.8	0.4	3.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF724)
CSN5_C	PF18323.1	gi|298675126|ref|YP_003726876.1|	-	5.6	8.0	6.0	2.3	9.2	1.5	2.7	2	1	0	2	2	2	0	Cop9	signalosome	subunit	5	C-terminal	domain
DEAD	PF00270.29	gi|298675127|ref|YP_003726877.1|	-	9e-20	71.2	0.0	2e-19	70.0	0.0	1.6	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|298675127|ref|YP_003726877.1|	-	5.7e-12	46.0	0.0	2.3e-11	44.0	0.0	2.0	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DUF1998	PF09369.10	gi|298675127|ref|YP_003726877.1|	-	7.1e-11	42.7	0.1	7.1e-11	42.7	0.1	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1998)
Helicase_C	PF00271.31	gi|298675127|ref|YP_003726877.1|	-	9e-08	32.4	0.0	3.5e-07	30.5	0.0	2.1	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
T2SSE	PF00437.20	gi|298675127|ref|YP_003726877.1|	-	0.0027	16.8	0.0	0.0048	16.0	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
eIF-5_eIF-2B	PF01873.17	gi|298675127|ref|YP_003726877.1|	-	0.053	13.4	0.2	0.053	13.4	0.2	2.8	2	1	2	4	4	4	0	Domain	found	in	IF2B/IF5
DUF4107	PF13389.6	gi|298675127|ref|YP_003726877.1|	-	0.059	13.5	0.0	0.14	12.3	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4107)
UvrD-helicase	PF00580.21	gi|298675127|ref|YP_003726877.1|	-	0.18	11.3	0.0	0.18	11.3	0.0	2.8	4	0	0	4	4	4	0	UvrD/REP	helicase	N-terminal	domain
AAA_19	PF13245.6	gi|298675127|ref|YP_003726877.1|	-	0.18	12.1	0.0	0.46	10.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
DUF262	PF03235.14	gi|298675128|ref|YP_003726878.1|	-	1.9e-36	126.3	8.5	1.9e-36	126.3	8.5	3.3	2	1	0	2	2	2	1	Protein	of	unknown	function	DUF262
DUF1524	PF07510.11	gi|298675128|ref|YP_003726878.1|	-	2.9e-29	101.7	4.0	2.9e-29	101.7	4.0	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1524)
Glypican	PF01153.19	gi|298675128|ref|YP_003726878.1|	-	0.0014	17.6	1.0	0.0023	16.9	1.0	1.2	1	0	0	1	1	1	1	Glypican
DUF643	PF04867.12	gi|298675128|ref|YP_003726878.1|	-	0.0055	17.3	3.2	0.0055	17.3	3.2	2.8	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF643)
MazE_antitoxin	PF04014.18	gi|298675129|ref|YP_003726879.1|	-	4.4e-09	36.1	0.1	6e-09	35.6	0.1	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
PrlF_antitoxin	PF15937.5	gi|298675129|ref|YP_003726879.1|	-	0.0041	17.5	0.1	0.0066	16.9	0.0	1.5	1	1	0	1	1	1	1	prlF	antitoxin	for	toxin	YhaV_toxin
MraZ	PF02381.18	gi|298675129|ref|YP_003726879.1|	-	0.091	12.8	0.0	0.12	12.4	0.0	1.3	1	0	0	1	1	1	0	MraZ	protein,	putative	antitoxin-like
PemK_toxin	PF02452.17	gi|298675130|ref|YP_003726880.1|	-	4.1e-11	43.3	0.0	4.5e-11	43.1	0.0	1.0	1	0	0	1	1	1	1	PemK-like,	MazF-like	toxin	of	type	II	toxin-antitoxin	system
FliW	PF02623.15	gi|298675130|ref|YP_003726880.1|	-	0.069	13.1	0.0	0.077	12.9	0.0	1.1	1	0	0	1	1	1	0	FliW	protein
OrfB_Zn_ribbon	PF07282.11	gi|298675131|ref|YP_003726881.1|	-	7.5e-25	86.7	0.4	3.5e-24	84.5	0.0	2.3	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675131|ref|YP_003726881.1|	-	4.7e-05	23.6	0.7	0.00011	22.4	0.7	1.5	1	0	0	1	1	1	1	Probable	transposase
HypA	PF01155.19	gi|298675131|ref|YP_003726881.1|	-	0.0071	16.4	4.2	0.095	12.7	0.4	3.0	3	1	0	3	3	3	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn_ribbon_17	PF17120.5	gi|298675131|ref|YP_003726881.1|	-	0.02	14.5	0.8	0.042	13.5	0.8	1.5	1	0	0	1	1	1	0	Zinc-ribbon,	C4HC2	type
UPF0547	PF10571.9	gi|298675131|ref|YP_003726881.1|	-	0.033	14.3	4.7	0.16	12.1	0.9	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DZR	PF12773.7	gi|298675131|ref|YP_003726881.1|	-	0.38	10.8	2.9	0.52	10.4	1.6	1.9	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|298675131|ref|YP_003726881.1|	-	1.3	8.8	8.2	1.5	8.6	5.4	2.6	2	1	1	3	3	3	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|298675131|ref|YP_003726881.1|	-	1.4	8.7	6.8	0.62	9.8	2.6	2.6	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn_Tnp_IS1595	PF12760.7	gi|298675131|ref|YP_003726881.1|	-	1.5	8.8	4.9	0.65	10.0	0.5	2.3	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|298675131|ref|YP_003726881.1|	-	1.6	8.7	4.7	2.4	8.1	0.2	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|298675131|ref|YP_003726881.1|	-	2.1	7.9	8.4	0.48	9.9	3.4	2.5	3	1	0	3	3	3	0	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|298675131|ref|YP_003726881.1|	-	2.9	7.7	6.2	32	4.4	0.3	3.3	3	0	0	3	3	3	0	Rubredoxin	metal	binding	domain
EF-hand_7	PF13499.6	gi|298675132|ref|YP_003726882.1|	-	0.00023	21.5	0.1	0.00043	20.7	0.1	1.4	1	1	0	1	1	1	1	EF-hand	domain	pair
EF-hand_1	PF00036.32	gi|298675132|ref|YP_003726882.1|	-	0.00028	20.2	1.0	0.0011	18.4	0.2	2.2	1	1	1	2	2	2	1	EF	hand
EF-hand_6	PF13405.6	gi|298675132|ref|YP_003726882.1|	-	0.00039	20.1	0.3	0.0047	16.7	0.0	2.5	1	1	1	2	2	2	1	EF-hand	domain
Dockerin_1	PF00404.18	gi|298675132|ref|YP_003726882.1|	-	0.03	14.5	4.1	3.7	7.8	0.1	2.8	1	1	2	3	3	3	0	Dockerin	type	I	domain
SpoIID	PF08486.10	gi|298675132|ref|YP_003726882.1|	-	0.072	13.6	0.0	0.082	13.5	0.0	1.2	1	0	0	1	1	1	0	Stage	II	sporulation	protein
Mrr_cat	PF04471.12	gi|298675133|ref|YP_003726883.1|	-	6.5e-20	71.3	0.4	1e-19	70.6	0.4	1.3	1	0	0	1	1	1	1	Restriction	endonuclease
Mrr_cat_2	PF13156.6	gi|298675133|ref|YP_003726883.1|	-	0.00024	21.0	0.2	0.00045	20.1	0.2	1.5	1	1	0	1	1	1	1	Restriction	endonuclease
BTB	PF00651.31	gi|298675133|ref|YP_003726883.1|	-	0.067	13.4	0.1	1.7	8.9	0.0	2.6	3	0	0	3	3	3	0	BTB/POZ	domain
PBECR3	PF18812.1	gi|298675133|ref|YP_003726883.1|	-	0.13	12.2	2.8	0.6	10.1	2.8	2.2	1	1	0	1	1	1	0	phage-Barnase-EndoU-ColicinE5/D-RelE	like	nuclease3
Mrr_cat	PF04471.12	gi|298675134|ref|YP_003726884.1|	-	6.6e-24	84.1	0.1	1.5e-23	83.0	0.1	1.7	1	0	0	1	1	1	1	Restriction	endonuclease
Mrr_cat_2	PF13156.6	gi|298675134|ref|YP_003726884.1|	-	2e-05	24.5	0.0	4.6e-05	23.3	0.0	1.6	1	0	0	1	1	1	1	Restriction	endonuclease
HEAT_2	PF13646.6	gi|298675134|ref|YP_003726884.1|	-	0.022	15.2	0.3	13	6.3	0.0	3.5	2	2	1	3	3	3	0	HEAT	repeats
NosD	PF05048.13	gi|298675135|ref|YP_003726885.1|	-	9.6e-64	214.9	102.9	3.7e-51	173.7	54.3	2.1	1	1	1	2	2	2	2	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|298675135|ref|YP_003726885.1|	-	7.1e-27	94.2	98.4	2.7e-19	69.6	55.1	3.3	2	1	2	4	4	4	2	Right	handed	beta	helix	region
Pectate_lyase_3	PF12708.7	gi|298675135|ref|YP_003726885.1|	-	0.00033	20.6	25.4	0.00033	20.6	25.4	3.5	2	1	2	4	4	4	3	Pectate	lyase	superfamily	protein
Nitroreductase	PF00881.24	gi|298675136|ref|YP_003726886.1|	-	9.1e-15	55.1	0.0	9.5e-05	22.5	0.0	4.1	3	1	1	4	4	4	4	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|298675136|ref|YP_003726886.1|	-	1.1e-09	38.2	0.0	1.1e-05	25.1	0.0	3.4	3	0	0	3	3	3	3	Putative	TM	nitroreductase
DUF2271	PF10029.9	gi|298675136|ref|YP_003726886.1|	-	0.032	13.9	0.0	0.059	13.0	0.0	1.4	1	0	0	1	1	1	0	Predicted	periplasmic	protein	(DUF2271)
CPBP	PF02517.16	gi|298675137|ref|YP_003726887.1|	-	1.9e-14	53.8	5.8	1.9e-14	53.8	5.8	2.5	2	1	0	3	3	3	1	CPBP	intramembrane	metalloprotease
DUF5320	PF17253.2	gi|298675138|ref|YP_003726888.1|	-	0.21	12.7	0.2	0.4	11.8	0.1	1.6	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5320)
VAPB_antitox	PF02697.14	gi|298675139|ref|YP_003726889.1|	-	0.0011	19.7	2.0	0.0035	18.1	2.0	1.8	1	1	0	1	1	1	1	Putative	antitoxin
Taxilin	PF09728.9	gi|298675139|ref|YP_003726889.1|	-	0.017	14.3	0.1	0.018	14.2	0.1	1.0	1	0	0	1	1	1	0	Myosin-like	coiled-coil	protein
ParE_toxin	PF05016.15	gi|298675140|ref|YP_003726890.1|	-	2.6e-12	47.2	0.2	3e-12	47.0	0.2	1.1	1	0	0	1	1	1	1	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
Gp49	PF05973.14	gi|298675140|ref|YP_003726890.1|	-	0.00037	20.6	0.0	0.00039	20.5	0.0	1.1	1	0	0	1	1	1	1	Phage	derived	protein	Gp49-like	(DUF891)
ParE-like_toxin	PF15781.5	gi|298675140|ref|YP_003726890.1|	-	0.017	15.0	0.2	0.03	14.3	0.2	1.4	1	1	0	1	1	1	0	ParE-like	toxin	of	type	II	bacterial	toxin-antitoxin	system
SPOR	PF05036.13	gi|298675140|ref|YP_003726890.1|	-	0.048	14.0	0.0	0.073	13.5	0.0	1.2	1	0	0	1	1	1	0	Sporulation	related	domain
DUF4158	PF13700.6	gi|298675141|ref|YP_003726891.1|	-	0.065	13.1	0.1	0.072	12.9	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4158)
Mrr_cat	PF04471.12	gi|298675142|ref|YP_003726892.1|	-	1.6e-22	79.7	0.3	3.5e-22	78.6	0.3	1.6	1	0	0	1	1	1	1	Restriction	endonuclease
Mrr_cat_2	PF13156.6	gi|298675142|ref|YP_003726892.1|	-	3.1e-05	23.9	1.2	6.2e-05	22.9	0.4	1.9	1	1	0	2	2	2	1	Restriction	endonuclease
BTB	PF00651.31	gi|298675142|ref|YP_003726892.1|	-	0.0092	16.2	0.9	0.61	10.3	0.0	2.7	3	0	0	3	3	3	1	BTB/POZ	domain
DUF1676	PF07898.13	gi|298675142|ref|YP_003726892.1|	-	0.048	13.7	0.3	0.11	12.6	0.3	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1676)
DUF4284	PF14112.6	gi|298675142|ref|YP_003726892.1|	-	0.091	13.7	0.4	0.091	13.7	0.4	2.0	2	1	0	2	2	2	0	Immunity	protein	22
CpxA_peri	PF16527.5	gi|298675142|ref|YP_003726892.1|	-	1.2	9.5	3.9	0.81	10.1	1.4	2.0	2	1	0	2	2	2	0	Two-component	sensor	protein	CpxA,	periplasmic	domain
Mrr_cat	PF04471.12	gi|298675143|ref|YP_003726893.1|	-	1.2e-22	80.1	0.0	2.4e-22	79.1	0.0	1.6	1	0	0	1	1	1	1	Restriction	endonuclease
zf-C4H2	PF10146.9	gi|298675144|ref|YP_003726894.1|	-	0.14	12.5	1.2	0.18	12.1	1.2	1.1	1	0	0	1	1	1	0	Zinc	finger-containing	protein
AAA	PF00004.29	gi|298675146|ref|YP_003726896.1|	-	2.1e-09	37.9	0.0	4.1e-09	37.0	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|298675146|ref|YP_003726896.1|	-	1.5e-08	35.0	0.2	1e-07	32.3	0.0	2.3	2	1	1	3	3	3	1	AAA	domain
Cdc6_C	PF09079.11	gi|298675146|ref|YP_003726896.1|	-	2.1e-08	34.0	0.1	9.1e-08	32.0	0.1	2.2	1	1	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
AAA_16	PF13191.6	gi|298675146|ref|YP_003726896.1|	-	5.6e-08	33.4	0.0	1.8e-07	31.7	0.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
ATPase_2	PF01637.18	gi|298675146|ref|YP_003726896.1|	-	1.8e-07	31.3	1.0	3.2e-07	30.5	0.3	1.6	1	1	1	2	2	2	1	ATPase	domain	predominantly	from	Archaea
NACHT	PF05729.12	gi|298675146|ref|YP_003726896.1|	-	0.00049	20.0	0.0	0.00092	19.2	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
AAA_2	PF07724.14	gi|298675146|ref|YP_003726896.1|	-	0.0013	18.9	0.2	0.0029	17.7	0.2	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
NB-ARC	PF00931.22	gi|298675146|ref|YP_003726896.1|	-	0.0032	16.7	0.3	0.0064	15.7	0.3	1.5	1	0	0	1	1	1	1	NB-ARC	domain
TniB	PF05621.11	gi|298675146|ref|YP_003726896.1|	-	0.005	16.3	0.0	0.0096	15.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	TniB	protein
RNA_helicase	PF00910.22	gi|298675146|ref|YP_003726896.1|	-	0.0051	17.2	0.3	0.7	10.3	0.0	2.7	1	1	1	2	2	2	1	RNA	helicase
AAA_7	PF12775.7	gi|298675146|ref|YP_003726896.1|	-	0.0062	16.1	1.1	0.028	13.9	0.1	2.3	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
KAP_NTPase	PF07693.14	gi|298675146|ref|YP_003726896.1|	-	0.0068	15.7	0.4	0.022	14.0	0.4	1.8	1	1	0	1	1	1	1	KAP	family	P-loop	domain
TsaE	PF02367.17	gi|298675146|ref|YP_003726896.1|	-	0.0085	16.1	0.1	0.05	13.6	0.0	2.0	1	1	1	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
DEAD	PF00270.29	gi|298675146|ref|YP_003726896.1|	-	0.012	15.3	1.3	0.18	11.6	1.3	2.4	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
RuvB_N	PF05496.12	gi|298675146|ref|YP_003726896.1|	-	0.015	15.0	0.0	0.037	13.8	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Sigma54_activat	PF00158.26	gi|298675146|ref|YP_003726896.1|	-	0.026	14.3	0.0	0.045	13.4	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
TIP49_C	PF17856.1	gi|298675146|ref|YP_003726896.1|	-	0.035	14.2	0.0	0.081	13.1	0.0	1.6	1	0	0	1	1	1	0	TIP49	AAA-lid	domain
Ribosomal_L4	PF00573.22	gi|298675146|ref|YP_003726896.1|	-	0.044	13.5	0.1	0.43	10.2	0.0	2.3	1	1	1	2	2	2	0	Ribosomal	protein	L4/L1	family
DUF815	PF05673.13	gi|298675146|ref|YP_003726896.1|	-	0.084	12.0	0.1	0.28	10.3	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
AAA_19	PF13245.6	gi|298675146|ref|YP_003726896.1|	-	0.22	11.9	0.7	1.1	9.5	0.4	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|298675146|ref|YP_003726896.1|	-	1.3	9.5	8.1	1	9.9	0.2	3.4	1	1	0	2	2	2	0	AAA	domain
HTH_30	PF13556.6	gi|298675147|ref|YP_003726897.1|	-	0.092	12.6	1.4	0.38	10.6	0.4	2.0	2	0	0	2	2	2	0	PucR	C-terminal	helix-turn-helix	domain
TPR_2	PF07719.17	gi|298675148|ref|YP_003726898.1|	-	8.5e-55	178.5	37.4	1.2e-05	25.0	0.0	19.2	19	1	1	20	20	19	10	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|298675148|ref|YP_003726898.1|	-	9.1e-47	155.1	55.9	1.3e-05	24.8	0.0	19.2	21	0	0	21	21	20	10	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|298675148|ref|YP_003726898.1|	-	4.6e-45	148.1	51.2	0.00013	21.9	0.0	18.9	18	2	2	20	20	19	10	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|298675148|ref|YP_003726898.1|	-	2.1e-38	127.7	6.7	0.00051	20.6	0.0	15.6	7	5	10	17	17	17	8	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|298675148|ref|YP_003726898.1|	-	2.9e-38	130.2	22.6	1.1e-05	25.9	0.1	12.8	3	3	11	15	15	15	11	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|298675148|ref|YP_003726898.1|	-	2.5e-34	117.6	0.0	0.0005	20.7	0.0	10.7	8	2	2	10	10	10	6	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|298675148|ref|YP_003726898.1|	-	2.8e-29	101.2	16.3	0.0028	17.9	0.1	12.9	9	6	3	12	12	12	7	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|298675148|ref|YP_003726898.1|	-	1.5e-25	89.1	0.0	0.00056	20.0	0.0	10.5	7	3	3	11	11	11	4	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|298675148|ref|YP_003726898.1|	-	4.6e-24	83.8	34.7	0.0011	18.6	0.2	14.7	12	4	5	17	17	16	7	TPR	repeat
NARP1	PF12569.8	gi|298675148|ref|YP_003726898.1|	-	6.2e-24	84.8	18.3	0.00021	20.3	0.0	9.3	4	2	4	9	9	9	9	NMDA	receptor-regulated	protein	1
ANAPC3	PF12895.7	gi|298675148|ref|YP_003726898.1|	-	8.2e-24	83.6	21.5	0.00013	22.1	0.1	9.0	4	3	6	10	10	10	9	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_7	PF13176.6	gi|298675148|ref|YP_003726898.1|	-	1.2e-19	68.8	10.2	0.005	16.8	0.0	12.7	12	1	1	13	13	12	3	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|298675148|ref|YP_003726898.1|	-	5.2e-17	62.0	14.2	0.0041	16.4	0.1	8.1	2	2	5	8	8	8	6	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|298675148|ref|YP_003726898.1|	-	5.4e-16	57.7	29.2	0.21	12.1	0.1	15.1	16	2	2	18	18	15	4	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|298675148|ref|YP_003726898.1|	-	1.7e-15	56.5	8.5	1.1	10.0	0.0	13.2	15	0	0	15	15	12	1	Tetratricopeptide	repeat
SRP_TPR_like	PF17004.5	gi|298675148|ref|YP_003726898.1|	-	5.4e-10	39.3	23.4	0.0009	19.2	0.2	7.7	3	2	4	7	7	7	3	Putative	TPR-like	repeat
Fis1_TPR_C	PF14853.6	gi|298675148|ref|YP_003726898.1|	-	6.4e-10	39.0	12.2	0.067	13.3	0.0	10.9	12	1	1	13	13	12	2	Fis1	C-terminal	tetratricopeptide	repeat
TPR_MalT	PF17874.1	gi|298675148|ref|YP_003726898.1|	-	1.1e-09	38.1	0.0	0.035	13.5	0.0	5.4	5	1	0	5	5	5	2	MalT-like	TPR	region
DUF3856	PF12968.7	gi|298675148|ref|YP_003726898.1|	-	3.7e-08	33.5	7.6	2.6	8.1	0.0	8.5	5	3	2	8	8	8	2	Domain	of	Unknown	Function	(DUF3856)
TPR_10	PF13374.6	gi|298675148|ref|YP_003726898.1|	-	1.1e-06	28.3	9.8	5.7	7.0	0.0	10.4	12	1	1	13	13	12	0	Tetratricopeptide	repeat
ATP13	PF12921.7	gi|298675148|ref|YP_003726898.1|	-	5e-05	23.1	1.3	0.55	10.1	0.0	5.4	5	1	1	6	6	5	1	Mitochondrial	ATPase	expression
ChAPs	PF09295.10	gi|298675148|ref|YP_003726898.1|	-	0.00023	20.3	14.9	1	8.3	0.3	5.4	4	2	2	6	6	6	1	ChAPs	(Chs5p-Arf1p-binding	proteins)
TPR_21	PF09976.9	gi|298675148|ref|YP_003726898.1|	-	0.00035	20.3	8.0	0.24	11.1	0.0	4.9	5	1	0	5	5	5	1	Tetratricopeptide	repeat-like	domain
TPR_20	PF14561.6	gi|298675148|ref|YP_003726898.1|	-	0.00064	20.0	17.0	11	6.5	0.0	8.1	6	3	4	10	10	9	0	Tetratricopeptide	repeat
Wzy_C_2	PF11846.8	gi|298675148|ref|YP_003726898.1|	-	0.00065	19.7	0.0	5.5	6.9	0.0	4.0	4	0	0	4	4	3	0	Virulence	factor	membrane-bound	polymerase,	C-terminal
TPR_4	PF07721.14	gi|298675148|ref|YP_003726898.1|	-	0.0011	19.4	0.0	5.8	7.8	0.1	5.1	5	0	0	5	5	3	0	Tetratricopeptide	repeat
PPR	PF01535.20	gi|298675148|ref|YP_003726898.1|	-	0.0014	18.7	10.9	62	4.2	0.1	9.2	11	0	0	11	11	9	0	PPR	repeat
BTAD	PF03704.17	gi|298675148|ref|YP_003726898.1|	-	0.003	18.0	0.3	4.6	7.7	0.1	4.3	4	1	1	5	5	4	1	Bacterial	transcriptional	activator	domain
Alkyl_sulf_dimr	PF14863.6	gi|298675148|ref|YP_003726898.1|	-	0.0092	16.4	7.0	30	5.1	0.1	6.1	3	1	4	7	7	5	0	Alkyl	sulfatase	dimerisation
DUF627	PF04781.12	gi|298675148|ref|YP_003726898.1|	-	0.014	15.4	10.7	7	6.7	0.0	6.8	5	4	2	7	7	7	0	Protein	of	unknown	function	(DUF627)
TPR_5	PF12688.7	gi|298675148|ref|YP_003726898.1|	-	0.025	14.8	0.3	29	4.9	0.0	4.9	6	0	0	6	6	4	0	Tetratrico	peptide	repeat
HTH_Bact	PF18768.1	gi|298675148|ref|YP_003726898.1|	-	0.028	14.0	0.1	62	3.3	0.0	5.7	6	0	0	6	6	6	0	Helix-turn-helix	bacterial	domain
PDEase_I_N	PF08499.12	gi|298675148|ref|YP_003726898.1|	-	0.083	12.7	0.0	9.8	6.1	0.0	2.6	2	0	0	2	2	2	0	3'5'-cyclic	nucleotide	phosphodiesterase	N-terminal
MIT	PF04212.18	gi|298675148|ref|YP_003726898.1|	-	0.11	12.6	14.1	13	6.0	0.2	8.0	6	3	2	8	8	7	0	MIT	(microtubule	interacting	and	transport)	domain
PUB	PF09409.10	gi|298675148|ref|YP_003726898.1|	-	0.11	12.4	1.0	0.47	10.4	0.2	2.5	2	0	0	2	2	1	0	PUB	domain
Hormone_recep	PF00104.30	gi|298675148|ref|YP_003726898.1|	-	0.32	10.5	9.6	2.2	7.8	1.3	4.0	3	2	2	5	5	5	0	Ligand-binding	domain	of	nuclear	hormone	receptor
Clathrin	PF00637.20	gi|298675148|ref|YP_003726898.1|	-	4.4	7.2	31.2	0.76	9.6	1.0	8.0	6	3	2	8	8	8	0	Region	in	Clathrin	and	VPS
TPR_2	PF07719.17	gi|298675150|ref|YP_003726900.1|	-	3.6e-15	54.8	0.3	0.013	15.5	0.2	5.1	5	0	0	5	5	5	3	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|298675150|ref|YP_003726900.1|	-	3.6e-14	51.9	0.2	0.0017	18.1	0.2	4.9	5	0	0	5	5	5	3	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|298675150|ref|YP_003726900.1|	-	3.6e-13	48.6	0.7	0.022	15.0	0.0	5.2	5	0	0	5	5	5	3	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|298675150|ref|YP_003726900.1|	-	1.1e-09	38.7	0.7	4.3e-05	23.9	0.0	3.9	3	1	1	4	4	4	1	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|298675150|ref|YP_003726900.1|	-	6.3e-09	36.3	0.0	0.0011	19.6	0.0	3.0	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|298675150|ref|YP_003726900.1|	-	8.5e-09	35.5	0.1	0.016	16.0	0.1	5.0	4	1	1	5	5	5	1	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|298675150|ref|YP_003726900.1|	-	2.8e-08	33.9	0.0	0.0062	16.7	0.2	2.4	1	1	2	3	3	3	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
NARP1	PF12569.8	gi|298675150|ref|YP_003726900.1|	-	3.1e-07	29.7	0.1	0.00052	19.1	0.0	2.1	1	1	1	2	2	2	2	NMDA	receptor-regulated	protein	1
TPR_9	PF13371.6	gi|298675150|ref|YP_003726900.1|	-	3.7e-07	30.2	0.2	0.0021	18.2	0.2	2.8	1	1	2	3	3	3	2	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|298675150|ref|YP_003726900.1|	-	4.4e-07	29.5	0.6	0.028	14.4	0.0	4.7	5	1	1	6	6	6	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|298675150|ref|YP_003726900.1|	-	6e-07	29.7	1.2	0.19	12.0	0.0	4.0	2	1	2	4	4	4	2	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|298675150|ref|YP_003726900.1|	-	2.7e-05	24.5	0.3	12	6.7	0.0	5.0	5	0	0	5	5	5	0	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|298675150|ref|YP_003726900.1|	-	0.00017	21.7	0.1	1	9.9	0.0	3.9	4	0	0	4	4	3	1	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|298675150|ref|YP_003726900.1|	-	0.00023	20.8	0.7	0.88	9.3	0.0	3.9	3	1	1	4	4	4	1	TPR	repeat
TPR_4	PF07721.14	gi|298675150|ref|YP_003726900.1|	-	0.0003	21.1	0.0	25	5.9	0.0	4.3	4	0	0	4	4	4	0	Tetratricopeptide	repeat
PPR	PF01535.20	gi|298675150|ref|YP_003726900.1|	-	0.0003	20.8	0.5	0.21	11.9	0.1	4.5	4	1	1	5	5	5	1	PPR	repeat
TPR_10	PF13374.6	gi|298675150|ref|YP_003726900.1|	-	0.00093	19.0	4.1	0.21	11.5	0.1	3.8	5	0	0	5	5	3	1	Tetratricopeptide	repeat
PPR_2	PF13041.6	gi|298675150|ref|YP_003726900.1|	-	0.023	14.9	0.0	1.2	9.3	0.0	2.6	2	0	0	2	2	2	0	PPR	repeat	family
Coatomer_E	PF04733.14	gi|298675150|ref|YP_003726900.1|	-	0.073	12.5	0.1	1.2	8.5	0.0	2.5	1	1	2	3	3	3	0	Coatomer	epsilon	subunit
Type_III_YscG	PF09477.10	gi|298675150|ref|YP_003726900.1|	-	0.073	13.1	0.0	0.16	12.0	0.0	1.4	1	1	0	1	1	1	0	Bacterial	type	II	secretion	system	chaperone	protein	(type_III_yscG)
TPR_19	PF14559.6	gi|298675151|ref|YP_003726901.1|	-	8.3e-11	42.3	1.8	2.1e-05	24.9	0.2	3.0	2	1	1	3	3	3	3	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|298675151|ref|YP_003726901.1|	-	1.6e-09	37.1	6.6	0.19	11.9	0.0	5.6	6	0	0	6	6	5	2	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|298675151|ref|YP_003726901.1|	-	4.8e-09	35.7	9.9	0.25	11.7	0.2	5.5	4	1	1	5	5	5	4	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|298675151|ref|YP_003726901.1|	-	3.1e-07	29.9	11.0	0.0054	16.5	0.1	5.2	4	1	1	5	5	5	3	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|298675151|ref|YP_003726901.1|	-	1.1e-06	28.8	0.1	0.064	13.5	0.0	2.5	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.6	gi|298675151|ref|YP_003726901.1|	-	1.7e-06	28.3	0.7	1.7	9.6	0.2	4.5	1	1	4	5	5	5	2	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|298675151|ref|YP_003726901.1|	-	1.2e-05	25.8	0.0	0.00082	20.0	0.0	2.9	3	0	0	3	3	3	1	Tetratricopeptide	repeat
NARP1	PF12569.8	gi|298675151|ref|YP_003726901.1|	-	1.9e-05	23.8	0.7	0.041	12.8	0.0	2.4	1	1	1	2	2	2	2	NMDA	receptor-regulated	protein	1
TPR_12	PF13424.6	gi|298675151|ref|YP_003726901.1|	-	7.2e-05	23.0	2.5	1.6	9.1	0.0	4.0	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|298675151|ref|YP_003726901.1|	-	8.2e-05	22.7	0.1	0.13	12.4	0.0	2.7	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|298675151|ref|YP_003726901.1|	-	0.0018	18.5	2.2	0.38	11.2	0.0	4.2	4	0	0	4	4	4	1	Tetratricopeptide	repeat
SRP_TPR_like	PF17004.5	gi|298675151|ref|YP_003726901.1|	-	0.007	16.4	0.4	1.4	9.0	0.2	2.4	1	1	1	2	2	2	1	Putative	TPR-like	repeat
Fis1_TPR_C	PF14853.6	gi|298675151|ref|YP_003726901.1|	-	0.011	15.8	4.4	0.052	13.6	0.1	3.5	3	1	1	4	4	3	0	Fis1	C-terminal	tetratricopeptide	repeat
TPR_MalT	PF17874.1	gi|298675151|ref|YP_003726901.1|	-	0.013	14.9	0.0	0.4	10.0	0.0	2.3	1	1	1	2	2	2	0	MalT-like	TPR	region
Type_III_YscG	PF09477.10	gi|298675151|ref|YP_003726901.1|	-	0.017	15.2	0.3	3.1	7.9	0.0	2.3	1	1	1	2	2	2	0	Bacterial	type	II	secretion	system	chaperone	protein	(type_III_yscG)
HrpB1_HrpK	PF09613.10	gi|298675151|ref|YP_003726901.1|	-	0.022	14.4	0.1	0.037	13.7	0.1	1.4	1	1	0	1	1	1	0	Bacterial	type	III	secretion	protein	(HrpB1_HrpK)
TPR_7	PF13176.6	gi|298675151|ref|YP_003726901.1|	-	0.024	14.7	0.3	20	5.5	0.0	3.9	3	1	1	4	4	4	0	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|298675151|ref|YP_003726901.1|	-	0.053	13.2	6.6	2.2	8.0	0.1	4.1	3	1	1	4	4	4	0	TPR	repeat
Polysacc_synt_3	PF13440.6	gi|298675153|ref|YP_003726903.1|	-	2.1e-21	76.4	11.4	2.1e-21	76.4	11.4	2.3	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt	PF01943.17	gi|298675153|ref|YP_003726903.1|	-	5.1e-21	75.3	21.5	5.1e-21	75.3	21.5	2.1	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|298675153|ref|YP_003726903.1|	-	1.3e-16	60.9	29.5	1.3e-16	60.9	29.5	3.7	4	0	0	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
MatE	PF01554.18	gi|298675153|ref|YP_003726903.1|	-	4.1e-10	39.5	6.5	4.1e-10	39.5	6.5	4.2	3	2	0	3	3	3	1	MatE
MurJ	PF03023.14	gi|298675153|ref|YP_003726903.1|	-	5.2e-05	22.0	36.6	0.00076	18.2	36.5	2.4	1	1	0	1	1	1	1	Lipid	II	flippase	MurJ
MannoseP_isomer	PF01050.18	gi|298675154|ref|YP_003726904.1|	-	4.7e-62	208.3	1.6	7.8e-62	207.6	1.6	1.3	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
NTP_transferase	PF00483.23	gi|298675154|ref|YP_003726904.1|	-	8.3e-54	182.8	0.0	1.9e-53	181.6	0.0	1.6	2	0	0	2	2	2	1	Nucleotidyl	transferase
Cupin_2	PF07883.11	gi|298675154|ref|YP_003726904.1|	-	1.8e-12	46.7	0.1	3.7e-12	45.8	0.1	1.6	1	0	0	1	1	1	1	Cupin	domain
NTP_transf_3	PF12804.7	gi|298675154|ref|YP_003726904.1|	-	5.2e-06	26.9	0.0	8.5e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
AraC_binding	PF02311.19	gi|298675154|ref|YP_003726904.1|	-	0.0076	16.2	0.1	0.014	15.2	0.1	1.4	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
IspD	PF01128.19	gi|298675154|ref|YP_003726904.1|	-	0.016	14.9	0.0	0.03	14.1	0.0	1.4	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
ID	PF18543.1	gi|298675154|ref|YP_003726904.1|	-	0.076	13.1	1.5	0.35	10.9	0.1	2.6	2	0	0	2	2	2	0	Intracellular	delivery	domain
DUF772	PF05598.11	gi|298675155|ref|YP_003726905.1|	-	3.6e-21	75.0	0.1	7.3e-21	74.0	0.1	1.5	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
DDE_Tnp_1	PF01609.21	gi|298675155|ref|YP_003726905.1|	-	2.7e-10	40.3	3.7	5.3e-09	36.0	3.7	2.2	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.6	gi|298675155|ref|YP_003726905.1|	-	0.003	17.6	0.3	0.0073	16.3	0.1	1.8	1	1	1	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.6	gi|298675155|ref|YP_003726905.1|	-	0.016	14.8	0.3	0.066	12.9	0.3	1.9	1	1	0	1	1	1	0	DDE	superfamily	endonuclease
DDE_Tnp_1_6	PF13751.6	gi|298675155|ref|YP_003726905.1|	-	0.087	13.0	0.1	0.17	12.1	0.1	1.5	1	0	0	1	1	1	0	Transposase	DDE	domain
Sulfotransfer_3	PF13469.6	gi|298675156|ref|YP_003726906.1|	-	2e-08	34.9	0.0	0.00097	19.6	0.0	2.5	2	1	0	2	2	2	2	Sulfotransferase	family
Sulfotransfer_1	PF00685.27	gi|298675156|ref|YP_003726906.1|	-	0.0047	16.4	1.1	0.059	12.9	1.1	2.4	1	1	0	1	1	1	1	Sulfotransferase	domain
Sulphotransf	PF09037.10	gi|298675156|ref|YP_003726906.1|	-	0.021	14.4	0.0	0.27	10.7	0.0	2.3	2	1	0	2	2	2	0	Stf0	sulphotransferase
ESCRT-II	PF05871.12	gi|298675156|ref|YP_003726906.1|	-	0.041	14.1	1.5	0.3	11.4	1.5	2.1	1	1	0	1	1	1	0	ESCRT-II	complex	subunit
Glycos_transf_1	PF00534.20	gi|298675157|ref|YP_003726907.1|	-	6.8e-40	136.4	0.0	1.3e-39	135.5	0.0	1.5	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|298675157|ref|YP_003726907.1|	-	9.2e-26	90.9	0.0	1.5e-25	90.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|298675157|ref|YP_003726907.1|	-	2.1e-10	40.9	0.0	4e-10	39.9	0.0	1.5	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|298675157|ref|YP_003726907.1|	-	0.00023	21.5	0.0	0.0004	20.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
CaMBD	PF02888.16	gi|298675157|ref|YP_003726907.1|	-	0.13	12.5	0.0	0.26	11.5	0.0	1.4	1	0	0	1	1	1	0	Calmodulin	binding	domain
PMT_2	PF13231.6	gi|298675159|ref|YP_003726909.1|	-	7.8e-14	52.2	17.7	7.8e-14	52.2	17.7	2.9	3	1	0	3	3	3	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
LPG_synthase_TM	PF03706.13	gi|298675160|ref|YP_003726910.1|	-	2.6e-44	151.9	28.1	3.1e-44	151.7	28.1	1.0	1	0	0	1	1	1	1	Lysylphosphatidylglycerol	synthase	TM	region
NS3_envE	PF02723.14	gi|298675160|ref|YP_003726910.1|	-	0.043	13.9	0.5	0.043	13.9	0.5	3.4	3	2	1	4	4	4	0	Non-structural	protein	NS3/Small	envelope	protein	E
PHP_C	PF13263.6	gi|298675161|ref|YP_003726911.1|	-	1.6e-14	53.3	0.0	8.2e-14	51.1	0.0	2.1	2	0	0	2	2	2	1	PHP-associated
PHP	PF02811.19	gi|298675161|ref|YP_003726911.1|	-	1.5e-12	48.2	0.0	1.6e-12	48.1	0.0	1.2	1	0	0	1	1	1	1	PHP	domain
UbiA	PF01040.18	gi|298675162|ref|YP_003726912.1|	-	6.2e-28	97.8	15.2	6.2e-28	97.8	15.2	1.6	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
PsbN	PF02468.15	gi|298675162|ref|YP_003726912.1|	-	0.016	15.1	3.7	3.2	7.7	0.6	3.4	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	N	protein	(psbN)
DUF362	PF04015.12	gi|298675163|ref|YP_003726913.1|	-	1.4e-26	94.0	0.0	2.3e-26	93.3	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF362)
Glycos_transf_1	PF00534.20	gi|298675164|ref|YP_003726914.1|	-	1.1e-36	126.0	2.0	7.9e-36	123.2	1.2	2.5	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|298675164|ref|YP_003726914.1|	-	3.5e-26	92.2	0.0	1.3e-24	87.1	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|298675164|ref|YP_003726914.1|	-	1.6e-10	41.2	0.0	3.3e-10	40.2	0.0	1.6	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|298675164|ref|YP_003726914.1|	-	0.00036	21.0	0.0	0.0005	20.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|298675164|ref|YP_003726914.1|	-	0.0047	17.3	0.0	0.01	16.2	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF3298	PF11738.8	gi|298675164|ref|YP_003726914.1|	-	0.034	15.2	0.5	0.15	13.1	0.2	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3298)
Epimerase	PF01370.21	gi|298675165|ref|YP_003726915.1|	-	6.8e-51	173.1	0.0	8.9e-51	172.7	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|298675165|ref|YP_003726915.1|	-	2.3e-50	171.9	0.0	3.8e-50	171.2	0.0	1.3	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|298675165|ref|YP_003726915.1|	-	1.8e-17	63.2	0.2	3.8e-17	62.2	0.2	1.5	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|298675165|ref|YP_003726915.1|	-	1.3e-14	54.0	0.0	2.7e-14	52.9	0.0	1.5	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|298675165|ref|YP_003726915.1|	-	4e-10	39.3	0.1	1.4e-09	37.5	0.1	2.0	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|298675165|ref|YP_003726915.1|	-	3.4e-07	29.7	0.1	7.1e-07	28.6	0.1	1.4	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|298675165|ref|YP_003726915.1|	-	0.00029	20.8	0.0	0.012	15.5	0.0	2.2	2	0	0	2	2	2	1	NAD(P)H-binding
Glycos_transf_1	PF00534.20	gi|298675166|ref|YP_003726916.1|	-	2e-35	121.8	0.9	5.4e-35	120.5	0.2	2.1	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|298675166|ref|YP_003726916.1|	-	3.7e-25	88.9	0.0	1.2e-24	87.3	0.0	2.0	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|298675166|ref|YP_003726916.1|	-	3.1e-09	37.1	0.0	7.3e-09	35.8	0.0	1.6	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|298675166|ref|YP_003726916.1|	-	0.00018	21.8	0.0	0.00054	20.3	0.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|298675166|ref|YP_003726916.1|	-	0.00099	19.6	0.0	0.0014	19.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
DUF3298	PF11738.8	gi|298675166|ref|YP_003726916.1|	-	0.073	14.1	0.5	0.26	12.3	0.2	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3298)
Epimerase	PF01370.21	gi|298675167|ref|YP_003726917.1|	-	1.1e-48	165.8	0.0	1.3e-48	165.5	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|298675167|ref|YP_003726917.1|	-	8.8e-45	153.5	0.2	3.7e-44	151.5	0.2	1.7	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|298675167|ref|YP_003726917.1|	-	6.1e-20	71.4	0.1	7.7e-20	71.0	0.1	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|298675167|ref|YP_003726917.1|	-	9.6e-18	64.3	0.1	1.1e-16	60.9	0.1	1.9	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
RmlD_sub_bind	PF04321.17	gi|298675167|ref|YP_003726917.1|	-	9.7e-13	47.9	0.0	1.2e-12	47.6	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|298675167|ref|YP_003726917.1|	-	3.3e-09	36.3	0.1	1.6e-06	27.5	0.1	2.8	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|298675167|ref|YP_003726917.1|	-	5.9e-07	29.6	0.0	9.3e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	NAD(P)H-binding
adh_short	PF00106.25	gi|298675167|ref|YP_003726917.1|	-	0.00061	19.3	0.0	0.0088	15.5	0.0	2.3	1	1	0	1	1	1	1	short	chain	dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|298675167|ref|YP_003726917.1|	-	0.0031	17.8	0.0	0.0055	17.0	0.0	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
NmrA	PF05368.13	gi|298675167|ref|YP_003726917.1|	-	0.011	15.3	0.1	1.1	8.7	0.0	2.2	2	0	0	2	2	2	0	NmrA-like	family
Lipase_GDSL_3	PF14606.6	gi|298675167|ref|YP_003726917.1|	-	0.97	9.5	3.7	4	7.5	1.3	2.5	2	1	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase	family
Glycos_transf_1	PF00534.20	gi|298675168|ref|YP_003726918.1|	-	2.4e-37	128.1	0.3	3.9e-37	127.4	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|298675168|ref|YP_003726918.1|	-	4.2e-32	111.4	0.0	6.3e-32	110.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|298675168|ref|YP_003726918.1|	-	2.5e-08	34.1	0.0	5.2e-08	33.1	0.0	1.6	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|298675168|ref|YP_003726918.1|	-	1.2e-07	32.0	0.0	2.9e-07	30.8	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF5626	PF18540.1	gi|298675168|ref|YP_003726918.1|	-	0.012	16.2	1.2	0.023	15.2	1.2	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5626)
PMBR	PF09373.10	gi|298675169|ref|YP_003726919.1|	-	0.0077	16.3	0.1	0.085	13.0	0.0	2.6	2	0	0	2	2	2	1	Pseudomurein-binding	repeat
Sulfotransfer_3	PF13469.6	gi|298675169|ref|YP_003726919.1|	-	0.0098	16.3	0.0	3.1	8.1	0.0	2.3	2	0	0	2	2	2	2	Sulfotransferase	family
Sulfotransfer_1	PF00685.27	gi|298675169|ref|YP_003726919.1|	-	0.018	14.5	2.8	0.32	10.4	2.8	2.2	1	1	0	1	1	1	0	Sulfotransferase	domain
Sulfotransfer_4	PF17784.1	gi|298675169|ref|YP_003726919.1|	-	0.02	14.7	0.1	0.34	10.7	0.0	2.4	2	1	0	2	2	2	0	Sulfotransferase	domain
AglB_L1	PF18079.1	gi|298675170|ref|YP_003726920.1|	-	1e-27	96.3	5.0	1e-27	96.3	5.0	2.0	2	0	0	2	2	2	1	Archaeal	glycosylation	protein	B	long	peripheral	domain
STT3	PF02516.14	gi|298675170|ref|YP_003726920.1|	-	3e-25	89.1	26.6	3e-25	89.1	26.6	2.2	2	1	0	2	2	2	1	Oligosaccharyl	transferase	STT3	subunit
DUF4179	PF13786.6	gi|298675170|ref|YP_003726920.1|	-	0.27	11.7	1.0	14	6.2	0.1	3.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4179)
NADH-u_ox-rdase	PF10785.9	gi|298675170|ref|YP_003726920.1|	-	0.6	10.8	4.9	29	5.4	1.0	4.3	3	1	0	3	3	3	0	NADH-ubiquinone	oxidoreductase	complex	I,	21	kDa	subunit
NTP_transf_2	PF01909.23	gi|298675171|ref|YP_003726921.1|	-	6.1e-13	48.9	0.5	7e-13	48.7	0.5	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Polbeta	PF18765.1	gi|298675171|ref|YP_003726921.1|	-	2.6e-10	40.3	0.2	3.3e-10	39.9	0.2	1.1	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
DUF86	PF01934.17	gi|298675172|ref|YP_003726922.1|	-	1.2e-13	50.9	0.2	1.7e-13	50.5	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF86
RRXRR	PF14239.6	gi|298675173|ref|YP_003726923.1|	-	2.9e-69	232.4	3.1	4.3e-69	231.8	3.1	1.3	1	0	0	1	1	1	1	RRXRR	protein
HNH_5	PF14279.6	gi|298675173|ref|YP_003726923.1|	-	8.6e-14	51.1	0.4	1.7e-13	50.2	0.4	1.5	1	0	0	1	1	1	1	HNH	endonuclease
HNH_4	PF13395.6	gi|298675173|ref|YP_003726923.1|	-	6.2e-12	45.3	0.0	1.6e-11	43.9	0.0	1.7	1	0	0	1	1	1	1	HNH	endonuclease
HNH	PF01844.23	gi|298675173|ref|YP_003726923.1|	-	4.1e-11	42.9	1.7	4.1e-11	42.9	1.7	2.1	2	0	0	2	2	2	1	HNH	endonuclease
SH3_2	PF07653.17	gi|298675173|ref|YP_003726923.1|	-	0.0065	16.1	0.3	0.065	12.9	0.2	2.3	1	1	1	2	2	2	1	Variant	SH3	domain
PEPcase_2	PF14010.6	gi|298675174|ref|YP_003726924.1|	-	2.5e-125	418.8	0.3	2.9e-125	418.6	0.3	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxylase
PEPcase	PF00311.17	gi|298675174|ref|YP_003726924.1|	-	1.8e-07	29.7	0.0	3e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxylase
PLC-beta_C	PF08703.10	gi|298675174|ref|YP_003726924.1|	-	0.0039	17.2	0.2	0.1	12.6	0.0	2.5	2	0	0	2	2	2	1	PLC-beta	C	terminal
CGGC	PF08821.11	gi|298675175|ref|YP_003726925.1|	-	5.1e-11	42.7	0.0	5.2e-11	42.7	0.0	1.0	1	0	0	1	1	1	1	CGGC	domain
DUF2162	PF09930.9	gi|298675176|ref|YP_003726926.1|	-	1.2e-68	230.9	25.2	1.4e-68	230.7	25.2	1.0	1	0	0	1	1	1	1	Predicted	transporter	(DUF2162)
YrvL	PF14184.6	gi|298675176|ref|YP_003726926.1|	-	0.017	15.3	2.7	0.017	15.3	2.7	2.8	3	1	0	3	3	3	0	Regulatory	protein	YrvL
Phage_holin_2_1	PF04971.12	gi|298675176|ref|YP_003726926.1|	-	9.7	6.3	7.7	1.6	8.8	0.4	2.6	2	1	0	2	2	2	0	Bacteriophage	P21	holin	S
MotA_ExbB	PF01618.16	gi|298675177|ref|YP_003726927.1|	-	2.8e-11	43.3	1.8	4.3e-11	42.7	1.8	1.4	1	1	0	1	1	1	1	MotA/TolQ/ExbB	proton	channel	family
VIT1	PF01988.19	gi|298675177|ref|YP_003726927.1|	-	0.00015	21.7	0.0	0.00024	21.0	0.0	1.3	1	1	0	1	1	1	1	VIT	family
HHH_8	PF14716.6	gi|298675177|ref|YP_003726927.1|	-	0.041	14.2	0.1	0.086	13.2	0.1	1.5	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
Spore_III_AB	PF09548.10	gi|298675177|ref|YP_003726927.1|	-	0.046	13.8	0.7	0.069	13.3	0.0	1.6	2	1	0	2	2	2	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
HisG	PF01634.18	gi|298675177|ref|YP_003726927.1|	-	0.14	12.1	0.0	0.2	11.6	0.0	1.2	1	0	0	1	1	1	0	ATP	phosphoribosyltransferase
Colicin_V	PF02674.16	gi|298675177|ref|YP_003726927.1|	-	0.15	12.1	4.5	0.63	10.0	0.6	2.3	2	0	0	2	2	2	0	Colicin	V	production	protein
DUF1574	PF07611.11	gi|298675177|ref|YP_003726927.1|	-	0.16	11.3	3.3	1.4	8.2	1.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1574)
DUF3925	PF13063.6	gi|298675177|ref|YP_003726927.1|	-	0.27	11.5	3.8	6.7	7.0	0.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3925)
Fumarate_red_D	PF02313.17	gi|298675177|ref|YP_003726927.1|	-	0.32	11.1	5.2	6.1	7.0	0.1	2.2	2	0	0	2	2	2	0	Fumarate	reductase	subunit	D
DUF2975	PF11188.8	gi|298675177|ref|YP_003726927.1|	-	1.9	8.4	5.7	1.8	8.4	0.8	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2975)
DUF2149	PF09919.9	gi|298675178|ref|YP_003726928.1|	-	7.7e-35	119.0	0.2	9e-35	118.8	0.2	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2149)
DUF5049	PF16468.5	gi|298675178|ref|YP_003726928.1|	-	0.12	12.2	0.6	0.44	10.5	0.1	2.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF5049)
CobN-Mg_chel	PF02514.16	gi|298675179|ref|YP_003726929.1|	-	0	1144.3	10.1	0	1143.2	2.1	2.3	3	0	0	3	3	3	2	CobN/Magnesium	Chelatase
TRM13	PF05206.14	gi|298675179|ref|YP_003726929.1|	-	0.054	13.0	1.4	0.1	12.1	1.4	1.3	1	0	0	1	1	1	0	Methyltransferase	TRM13
Peptidase_S8	PF00082.22	gi|298675180|ref|YP_003726930.1|	-	4.3e-50	170.7	8.7	4.3e-50	170.7	8.7	2.8	3	1	0	3	3	3	1	Subtilase	family
Big_2	PF02368.18	gi|298675180|ref|YP_003726930.1|	-	2e-13	50.1	47.5	1.1e-07	31.6	6.1	6.4	7	0	0	7	7	7	4	Bacterial	Ig-like	domain	(group	2)
Serglycin	PF04360.12	gi|298675180|ref|YP_003726930.1|	-	0.63	10.0	7.2	0.12	12.3	2.6	2.2	2	0	0	2	2	2	0	Serglycin
Pilin_N	PF07790.11	gi|298675182|ref|YP_003726932.1|	-	2.9e-11	44.1	2.8	4.2e-11	43.6	2.8	1.4	1	1	0	1	1	1	1	Archaeal	Type	IV	pilin,	N-terminal
Lactamase_B	PF00753.27	gi|298675183|ref|YP_003726933.1|	-	3e-12	47.0	0.2	3.9e-12	46.6	0.2	1.4	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|298675183|ref|YP_003726933.1|	-	5.5e-05	22.8	0.1	8.4e-05	22.2	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|298675183|ref|YP_003726933.1|	-	0.014	15.3	0.0	0.039	13.8	0.0	1.7	2	0	0	2	2	2	0	Beta-lactamase	superfamily	domain
Fe_dep_repress	PF01325.19	gi|298675184|ref|YP_003726934.1|	-	5.8e-23	80.9	0.3	8e-23	80.4	0.3	1.2	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.15	gi|298675184|ref|YP_003726934.1|	-	1e-15	57.5	0.1	3.5e-15	55.8	0.1	1.9	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
MarR_2	PF12802.7	gi|298675184|ref|YP_003726934.1|	-	3.1e-05	23.8	0.0	5e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|298675184|ref|YP_003726934.1|	-	7.3e-05	22.2	0.0	0.00012	21.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|298675184|ref|YP_003726934.1|	-	0.00015	21.6	0.0	0.00025	20.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.6	gi|298675184|ref|YP_003726934.1|	-	0.00083	19.8	0.1	0.0018	18.7	0.1	1.6	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|298675184|ref|YP_003726934.1|	-	0.0091	15.9	0.1	0.015	15.2	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HrcA_DNA-bdg	PF03444.15	gi|298675184|ref|YP_003726934.1|	-	0.049	13.3	0.0	0.28	10.9	0.0	2.0	1	1	1	2	2	2	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Rrf2	PF02082.20	gi|298675184|ref|YP_003726934.1|	-	0.1	13.0	0.0	0.15	12.4	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_Crp_2	PF13545.6	gi|298675184|ref|YP_003726934.1|	-	0.19	11.7	0.0	0.32	11.0	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|298675184|ref|YP_003726934.1|	-	0.2	11.5	0.0	0.3	10.9	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
FeoC	PF09012.10	gi|298675185|ref|YP_003726935.1|	-	1.6e-05	24.9	1.5	2e-05	24.6	1.5	1.2	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_IclR	PF09339.10	gi|298675185|ref|YP_003726935.1|	-	8.5e-05	22.3	0.0	0.00012	21.8	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
PadR	PF03551.14	gi|298675185|ref|YP_003726935.1|	-	0.00069	19.5	0.1	0.0044	17.0	0.1	2.0	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
Rrf2	PF02082.20	gi|298675185|ref|YP_003726935.1|	-	0.012	15.9	0.1	0.017	15.5	0.1	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
YjcQ	PF09639.10	gi|298675185|ref|YP_003726935.1|	-	0.016	15.4	0.1	0.02	15.1	0.1	1.2	1	0	0	1	1	1	0	YjcQ	protein
DUF2513	PF10711.9	gi|298675185|ref|YP_003726935.1|	-	0.018	15.3	0.0	0.021	15.1	0.0	1.1	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
RPA_C	PF08784.11	gi|298675185|ref|YP_003726935.1|	-	0.018	15.7	0.1	0.024	15.3	0.1	1.2	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
MarR_2	PF12802.7	gi|298675185|ref|YP_003726935.1|	-	0.022	14.6	0.0	0.029	14.3	0.0	1.1	1	0	0	1	1	1	0	MarR	family
MarR	PF01047.22	gi|298675185|ref|YP_003726935.1|	-	0.023	14.6	0.1	0.031	14.2	0.1	1.3	1	0	0	1	1	1	0	MarR	family
Baculo_LEF5	PF04838.12	gi|298675185|ref|YP_003726935.1|	-	0.026	14.6	0.5	0.056	13.5	0.4	1.6	1	1	1	2	2	2	0	Baculoviridae	late	expression	factor	5
HTH_24	PF13412.6	gi|298675185|ref|YP_003726935.1|	-	0.027	14.0	0.0	0.034	13.7	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.6	gi|298675185|ref|YP_003726935.1|	-	0.041	14.0	0.4	0.29	11.3	0.4	2.0	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
ANT	PF03374.14	gi|298675185|ref|YP_003726935.1|	-	0.093	13.1	0.2	1.6	9.1	0.1	2.0	1	1	0	2	2	2	0	Phage	antirepressor	protein	KilAC	domain
RseC_MucC	PF04246.12	gi|298675185|ref|YP_003726935.1|	-	0.099	12.6	0.8	0.13	12.2	0.8	1.2	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
zf-NADH-PPase	PF09297.11	gi|298675185|ref|YP_003726935.1|	-	0.18	11.5	5.9	0.61	9.8	0.2	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
FeoA	PF04023.14	gi|298675187|ref|YP_003726937.1|	-	7.5e-12	45.3	1.0	9.6e-12	45.0	1.0	1.1	1	0	0	1	1	1	1	FeoA	domain
FeoA	PF04023.14	gi|298675188|ref|YP_003726938.1|	-	3.4e-12	46.4	0.7	3.7e-12	46.3	0.7	1.0	1	0	0	1	1	1	1	FeoA	domain
DUF1967	PF09269.11	gi|298675188|ref|YP_003726938.1|	-	0.0017	18.2	0.1	0.11	12.4	0.0	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1967)
Orn_Arg_deC_N	PF02784.16	gi|298675188|ref|YP_003726938.1|	-	0.07	12.5	0.0	0.07	12.5	0.0	1.2	1	0	0	1	1	1	0	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
ABC2_membrane	PF01061.24	gi|298675189|ref|YP_003726939.1|	-	2.3e-22	79.5	20.3	2.3e-22	79.5	20.3	1.7	1	1	1	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|298675189|ref|YP_003726939.1|	-	2.6e-12	46.5	29.9	2.6e-12	46.5	29.9	1.8	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|298675189|ref|YP_003726939.1|	-	1.2e-06	28.0	23.2	1.7e-05	24.3	19.2	2.3	1	1	1	2	2	2	2	ABC-2	family	transporter	protein
CcmB	PF03379.13	gi|298675189|ref|YP_003726939.1|	-	2.9e-06	27.0	9.7	2.9e-06	27.0	9.7	1.3	1	1	0	1	1	1	1	CcmB	protein
ABC_tran	PF00005.27	gi|298675190|ref|YP_003726940.1|	-	6.8e-32	110.8	0.0	1.2e-31	110.1	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675190|ref|YP_003726940.1|	-	4.8e-13	49.6	0.9	3.8e-07	30.2	0.0	2.4	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|298675190|ref|YP_003726940.1|	-	4.3e-07	30.0	0.6	0.012	15.3	0.0	2.4	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_23	PF13476.6	gi|298675190|ref|YP_003726940.1|	-	0.00048	20.7	5.4	0.0016	19.0	5.4	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|298675190|ref|YP_003726940.1|	-	0.00084	19.0	0.0	0.0022	17.7	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.19	gi|298675190|ref|YP_003726940.1|	-	0.00088	18.8	1.5	0.015	14.7	0.6	2.6	2	1	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
DUF4162	PF13732.6	gi|298675190|ref|YP_003726940.1|	-	0.0009	19.9	0.4	0.026	15.2	0.0	2.5	2	1	1	3	3	2	1	Domain	of	unknown	function	(DUF4162)
AAA	PF00004.29	gi|298675190|ref|YP_003726940.1|	-	0.0014	19.1	1.2	0.019	15.4	1.2	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.15	gi|298675190|ref|YP_003726940.1|	-	0.0025	17.7	0.5	1.7	8.5	0.0	2.4	2	0	0	2	2	2	2	NTPase
AAA_27	PF13514.6	gi|298675190|ref|YP_003726940.1|	-	0.037	13.6	0.3	0.079	12.5	0.1	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|298675190|ref|YP_003726940.1|	-	0.069	12.9	0.1	0.15	11.8	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
Thymidylate_kin	PF02223.17	gi|298675190|ref|YP_003726940.1|	-	0.1	12.3	0.0	1.7	8.3	0.0	2.3	2	0	0	2	2	2	0	Thymidylate	kinase
Mg_chelatase	PF01078.21	gi|298675190|ref|YP_003726940.1|	-	0.12	11.8	0.0	0.33	10.3	0.0	1.7	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.6	gi|298675190|ref|YP_003726940.1|	-	0.13	12.6	0.6	0.34	11.2	0.5	2.0	1	1	0	1	1	1	0	AAA	domain
DUF5320	PF17253.2	gi|298675191|ref|YP_003726941.1|	-	0.00027	22.0	0.1	0.00028	21.9	0.1	1.2	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5320)
Arg_decarbox_C	PF17944.1	gi|298675191|ref|YP_003726941.1|	-	0.009	16.5	0.1	0.013	16.0	0.1	1.3	1	0	0	1	1	1	1	Arginine	decarboxylase	C-terminal	helical	extension
Closter_coat	PF01785.17	gi|298675191|ref|YP_003726941.1|	-	0.098	11.9	0.3	0.12	11.6	0.3	1.1	1	0	0	1	1	1	0	Closterovirus	coat	protein
HxlR	PF01638.17	gi|298675192|ref|YP_003726942.1|	-	1.3e-22	79.4	0.1	1.5e-22	79.2	0.1	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_20	PF12840.7	gi|298675192|ref|YP_003726942.1|	-	0.00081	19.4	0.0	0.0012	18.8	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.6	gi|298675192|ref|YP_003726942.1|	-	0.00097	19.1	0.0	0.0016	18.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
PadR	PF03551.14	gi|298675192|ref|YP_003726942.1|	-	0.0016	18.4	0.0	0.0024	17.8	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF2250	PF10007.9	gi|298675192|ref|YP_003726942.1|	-	0.0021	18.1	0.0	0.0034	17.5	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
MarR	PF01047.22	gi|298675192|ref|YP_003726942.1|	-	0.009	15.9	0.0	0.014	15.3	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.6	gi|298675192|ref|YP_003726942.1|	-	0.032	14.4	0.0	0.058	13.6	0.0	1.4	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_24	PF13412.6	gi|298675192|ref|YP_003726942.1|	-	0.052	13.1	0.1	0.11	12.1	0.1	1.6	1	1	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
LexA_DNA_bind	PF01726.16	gi|298675192|ref|YP_003726942.1|	-	0.077	12.8	0.0	0.12	12.1	0.0	1.2	1	0	0	1	1	1	0	LexA	DNA	binding	domain
FXa_inhibition	PF14670.6	gi|298675192|ref|YP_003726942.1|	-	0.11	12.8	3.5	0.2	12.0	3.1	1.6	2	0	0	2	2	2	0	Coagulation	Factor	Xa	inhibitory	site
B-block_TFIIIC	PF04182.12	gi|298675192|ref|YP_003726942.1|	-	0.14	12.3	0.0	0.21	11.8	0.0	1.3	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
TrmB	PF01978.19	gi|298675193|ref|YP_003726943.1|	-	0.00065	19.5	0.0	0.00098	19.0	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|298675193|ref|YP_003726943.1|	-	0.0021	17.9	0.0	0.0029	17.5	0.0	1.2	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|298675193|ref|YP_003726943.1|	-	0.0029	17.5	0.1	0.0047	16.8	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_36	PF13730.6	gi|298675193|ref|YP_003726943.1|	-	0.0091	15.9	0.0	0.017	15.1	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|298675193|ref|YP_003726943.1|	-	0.019	14.9	0.0	0.033	14.1	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
Fer4_5	PF12801.7	gi|298675194|ref|YP_003726944.1|	-	5.5e-12	45.5	11.1	2e-10	40.4	1.9	3.7	5	0	0	5	5	5	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|298675194|ref|YP_003726944.1|	-	4.1e-10	39.0	17.5	2.2e-05	24.1	2.1	3.7	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298675194|ref|YP_003726944.1|	-	1.8e-08	34.9	14.6	0.0013	19.2	1.8	3.2	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675194|ref|YP_003726944.1|	-	2.3e-08	34.1	15.6	5.6e-05	23.2	15.0	3.0	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298675194|ref|YP_003726944.1|	-	2e-07	31.2	11.4	2e-07	31.2	11.4	2.2	2	1	1	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298675194|ref|YP_003726944.1|	-	2.5e-07	30.7	19.1	3.1e-06	27.2	4.7	2.8	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298675194|ref|YP_003726944.1|	-	5.6e-07	29.4	14.4	1.3e-05	25.1	2.7	3.4	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298675194|ref|YP_003726944.1|	-	2.2e-06	27.6	21.0	3.8e-05	23.7	17.2	3.2	3	1	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298675194|ref|YP_003726944.1|	-	4e-05	24.1	17.2	0.0099	16.4	6.5	3.0	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675194|ref|YP_003726944.1|	-	5.3e-05	24.1	15.9	0.0056	17.6	2.3	3.2	4	0	0	4	4	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|298675194|ref|YP_003726944.1|	-	5.6e-05	23.0	1.8	5.6e-05	23.0	1.8	3.1	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|298675194|ref|YP_003726944.1|	-	0.0024	18.4	1.9	0.0024	18.4	1.9	2.8	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|298675194|ref|YP_003726944.1|	-	0.0034	18.2	22.8	0.03	15.3	3.0	3.8	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298675194|ref|YP_003726944.1|	-	0.064	13.7	20.7	0.22	12.0	4.2	2.9	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298675194|ref|YP_003726944.1|	-	0.56	11.1	13.9	2.2	9.2	3.2	2.5	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298675194|ref|YP_003726944.1|	-	1	10.1	8.9	2.9	8.7	0.7	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.7	gi|298675194|ref|YP_003726944.1|	-	7.2	7.4	27.1	0.96	10.1	4.5	3.7	3	1	1	4	4	4	0	4Fe-4S	binding	domain
K-box	PF01486.17	gi|298675195|ref|YP_003726945.1|	-	0.035	14.3	0.4	0.12	12.6	0.3	1.7	1	1	1	2	2	2	0	K-box	region
Borealin	PF10512.9	gi|298675195|ref|YP_003726945.1|	-	0.094	12.7	1.4	1.1	9.2	0.2	2.0	1	1	1	2	2	2	0	Cell	division	cycle-associated	protein	8
RHH_1	PF01402.21	gi|298675195|ref|YP_003726945.1|	-	1.4	8.9	4.8	1.6	8.8	0.1	2.1	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
URO-D	PF01208.17	gi|298675196|ref|YP_003726946.1|	-	5.3e-62	210.0	0.0	6e-62	209.8	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
RtcB	PF01139.17	gi|298675196|ref|YP_003726946.1|	-	0.039	13.1	0.0	0.058	12.6	0.0	1.2	1	0	0	1	1	1	0	tRNA-splicing	ligase	RtcB
NosD	PF05048.13	gi|298675197|ref|YP_003726947.1|	-	5.2e-65	219.1	103.9	3.3e-35	121.5	37.5	3.2	1	1	2	3	3	3	3	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|298675197|ref|YP_003726947.1|	-	2.2e-33	115.4	126.2	3.4e-19	69.2	38.9	3.8	1	1	3	4	4	4	3	Right	handed	beta	helix	region
DUF1565	PF07602.11	gi|298675197|ref|YP_003726947.1|	-	4.6e-06	26.2	68.9	0.0082	15.5	18.4	5.0	1	1	2	3	3	3	2	Protein	of	unknown	function	(DUF1565)
Pectate_lyase_3	PF12708.7	gi|298675197|ref|YP_003726947.1|	-	0.0072	16.2	11.1	0.0072	16.2	11.1	4.5	1	1	4	5	5	5	2	Pectate	lyase	superfamily	protein
RicinB_lectin_2	PF14200.6	gi|298675198|ref|YP_003726948.1|	-	9.7e-21	74.3	14.6	4e-12	46.7	2.0	4.3	3	1	1	4	4	4	2	Ricin-type	beta-trefoil	lectin	domain-like
Fascin	PF06268.13	gi|298675198|ref|YP_003726948.1|	-	1.5e-12	47.7	1.4	2.6e-07	30.9	0.0	4.0	2	2	2	4	4	4	3	Fascin	domain
Ricin_B_lectin	PF00652.22	gi|298675198|ref|YP_003726948.1|	-	2.7e-11	43.8	8.2	8.5e-11	42.2	8.2	1.9	1	0	0	1	1	1	1	Ricin-type	beta-trefoil	lectin	domain
FRG1	PF06229.12	gi|298675198|ref|YP_003726948.1|	-	4.7e-10	39.5	2.2	9.1e-06	25.5	0.1	3.0	2	1	1	3	3	3	2	FRG1-like	domain
PAS_4	PF08448.10	gi|298675200|ref|YP_003726950.1|	-	9.2e-44	148.2	0.0	1.2e-18	67.3	0.0	4.5	4	0	0	4	4	4	4	PAS	fold
PAS_9	PF13426.7	gi|298675200|ref|YP_003726950.1|	-	3.6e-40	136.4	8.5	5.7e-13	49.0	0.2	5.3	6	0	0	6	6	6	4	PAS	domain
PAS	PF00989.25	gi|298675200|ref|YP_003726950.1|	-	1.5e-34	118.4	0.0	6.8e-11	42.2	0.0	4.5	4	0	0	4	4	4	4	PAS	fold
HisKA_2	PF07568.12	gi|298675200|ref|YP_003726950.1|	-	1.6e-28	98.6	1.4	1.6e-28	98.6	1.4	2.5	3	0	0	3	3	2	1	Histidine	kinase
PAS_8	PF13188.7	gi|298675200|ref|YP_003726950.1|	-	4.9e-19	67.9	0.0	1.7e-05	24.7	0.0	4.5	4	0	0	4	4	4	3	PAS	domain
HATPase_c	PF02518.26	gi|298675200|ref|YP_003726950.1|	-	5e-09	36.6	0.2	6.6e-07	29.8	0.0	3.5	3	1	0	3	3	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_3	PF08447.12	gi|298675200|ref|YP_003726950.1|	-	4.8e-06	26.8	0.2	0.12	12.7	0.0	4.5	5	0	0	5	5	5	1	PAS	fold
sCache_3_2	PF17203.4	gi|298675200|ref|YP_003726950.1|	-	1e-05	25.7	0.0	0.006	16.7	0.0	3.2	2	0	0	2	2	2	1	Single	cache	domain	3
sCache_3_3	PF17202.4	gi|298675200|ref|YP_003726950.1|	-	1.7e-05	25.2	0.5	0.17	12.3	0.0	3.9	4	0	0	4	4	4	2	Single	cache	domain	3
HWE_HK	PF07536.14	gi|298675200|ref|YP_003726950.1|	-	2.8e-05	24.7	0.0	2.8e-05	24.7	0.0	2.4	3	0	0	3	3	2	1	HWE	histidine	kinase
PAS_10	PF13596.6	gi|298675200|ref|YP_003726950.1|	-	0.00021	21.9	1.4	0.51	11.0	0.0	4.1	5	0	0	5	5	4	1	PAS	domain
HATPase_c_2	PF13581.6	gi|298675200|ref|YP_003726950.1|	-	0.00047	20.1	0.0	0.0012	18.8	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
Cache_3-Cache_2	PF17201.4	gi|298675200|ref|YP_003726950.1|	-	0.0012	18.2	3.2	0.088	12.1	0.0	3.3	3	0	0	3	3	3	1	Cache	3/Cache	2	fusion	domain
PAS_12	PF18095.1	gi|298675200|ref|YP_003726950.1|	-	0.0085	15.7	0.5	0.57	9.8	0.0	3.1	3	0	0	3	3	3	1	UPF0242	C-terminal	PAS-like	domain
PAS_7	PF12860.7	gi|298675200|ref|YP_003726950.1|	-	0.017	15.3	7.1	3.9	7.7	0.0	5.1	6	2	0	6	6	5	0	PAS	fold
Peptidase_M3_N	PF08439.10	gi|298675200|ref|YP_003726950.1|	-	0.033	14.5	0.6	0.15	12.4	0.6	2.2	1	0	0	1	1	1	0	Oligopeptidase	F
DnaB	PF00772.21	gi|298675200|ref|YP_003726950.1|	-	0.045	13.8	0.1	0.91	9.6	0.0	2.8	2	0	0	2	2	2	0	DnaB-like	helicase	N	terminal	domain
Mrr_cat	PF04471.12	gi|298675201|ref|YP_003726951.1|	-	5.5e-08	32.8	0.0	6.6e-08	32.6	0.0	1.1	1	0	0	1	1	1	1	Restriction	endonuclease
DUF2840	PF11000.8	gi|298675201|ref|YP_003726951.1|	-	0.032	14.0	0.0	0.04	13.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2840)
PTH2	PF01981.16	gi|298675202|ref|YP_003726952.1|	-	2.6e-05	24.5	0.0	3.2e-05	24.2	0.0	1.2	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Mhr1	PF12829.7	gi|298675202|ref|YP_003726952.1|	-	0.12	12.5	0.1	0.2	11.7	0.1	1.4	1	0	0	1	1	1	0	Transcriptional	regulation	of	mitochondrial	recombination
PAS_3	PF08447.12	gi|298675203|ref|YP_003726953.1|	-	3.5e-34	116.9	0.3	4.4e-19	68.6	0.2	2.4	2	0	0	2	2	2	2	PAS	fold
GAF_2	PF13185.6	gi|298675203|ref|YP_003726953.1|	-	1.4e-11	44.8	0.0	2.1e-11	44.3	0.0	1.3	1	0	0	1	1	1	1	GAF	domain
PAS_9	PF13426.7	gi|298675203|ref|YP_003726953.1|	-	4.7e-07	30.0	0.7	9.5e-05	22.6	0.1	2.4	2	0	0	2	2	2	1	PAS	domain
PAS	PF00989.25	gi|298675203|ref|YP_003726953.1|	-	0.00065	19.7	0.3	0.031	14.3	0.1	3.3	3	1	0	3	3	3	1	PAS	fold
PAS_11	PF14598.6	gi|298675203|ref|YP_003726953.1|	-	0.00079	19.5	0.0	0.067	13.3	0.0	2.3	2	0	0	2	2	2	1	PAS	domain
GAF_3	PF13492.6	gi|298675203|ref|YP_003726953.1|	-	0.0011	19.3	0.0	0.0017	18.7	0.0	1.3	1	0	0	1	1	1	1	GAF	domain
GAF	PF01590.26	gi|298675203|ref|YP_003726953.1|	-	0.026	15.1	0.0	0.045	14.4	0.0	1.4	1	0	0	1	1	1	0	GAF	domain
CdiA_C	PF18451.1	gi|298675203|ref|YP_003726953.1|	-	0.039	14.2	3.4	0.11	12.7	0.5	3.1	3	1	1	4	4	4	0	Contact-dependent	growth	inhibition	CdiA	C-terminal	domain
PAS_4	PF08448.10	gi|298675203|ref|YP_003726953.1|	-	0.05	13.9	0.0	0.49	10.7	0.0	2.4	3	0	0	3	3	3	0	PAS	fold
SpoVT_C	PF15714.5	gi|298675203|ref|YP_003726953.1|	-	0.1	12.6	0.1	0.71	9.9	0.0	2.1	2	0	0	2	2	2	0	Stage	V	sporulation	protein	T	C-terminal,	transcription	factor
DUF2608	PF11019.8	gi|298675204|ref|YP_003726954.1|	-	0.3	10.5	4.2	9.1	5.7	0.4	2.9	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2608)
Resolvase	PF00239.21	gi|298675205|ref|YP_003726955.1|	-	3e-19	69.6	0.1	3.5e-19	69.3	0.1	1.1	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.7	gi|298675205|ref|YP_003726955.1|	-	0.065	13.4	0.0	0.12	12.6	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Trp_syntA	PF00290.20	gi|298675205|ref|YP_003726955.1|	-	0.069	12.0	0.0	0.093	11.6	0.0	1.2	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
OrfB_IS605	PF01385.19	gi|298675206|ref|YP_003726956.1|	-	4.1e-24	85.1	0.1	1.1e-23	83.8	0.1	1.7	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675206|ref|YP_003726956.1|	-	1.9e-12	46.9	0.0	4.9e-12	45.6	0.0	1.8	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Glyco_hydro_97	PF10566.9	gi|298675206|ref|YP_003726956.1|	-	0.00017	21.0	0.8	0.00026	20.4	0.8	1.3	1	0	0	1	1	1	1	Glycoside	hydrolase	97
Dynamin_N	PF00350.23	gi|298675206|ref|YP_003726956.1|	-	0.065	13.3	0.5	0.14	12.2	0.1	1.8	2	0	0	2	2	2	0	Dynamin	family
HEPN_Swt1	PF18731.1	gi|298675206|ref|YP_003726956.1|	-	0.18	12.2	0.9	1.6	9.1	0.1	2.3	2	0	0	2	2	2	0	Swt1-like	HEPN
ACP_PD	PF04336.12	gi|298675206|ref|YP_003726956.1|	-	0.33	11.4	2.6	1.1	9.7	0.4	2.8	2	2	1	3	3	3	0	Acyl	carrier	protein	phosphodiesterase
DUF22	PF01629.16	gi|298675207|ref|YP_003726957.1|	-	2.6e-37	126.7	0.2	3.3e-37	126.4	0.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF22
DZR	PF12773.7	gi|298675208|ref|YP_003726958.1|	-	0.24	11.5	0.2	0.24	11.5	0.2	2.4	2	2	0	2	2	2	0	Double	zinc	ribbon
DUF4428	PF14471.6	gi|298675208|ref|YP_003726958.1|	-	0.54	10.2	0.0	0.54	10.2	0.0	2.8	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
PriA_CRR	PF18319.1	gi|298675208|ref|YP_003726958.1|	-	0.94	9.5	3.6	5	7.2	0.4	2.7	2	0	0	2	2	2	0	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
zf-ribbon_3	PF13248.6	gi|298675208|ref|YP_003726958.1|	-	2	7.9	6.7	4.7	6.8	0.1	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
PHD	PF00628.29	gi|298675208|ref|YP_003726958.1|	-	6.6	6.7	8.9	49	3.9	0.1	3.2	3	0	0	3	3	3	0	PHD-finger
CMD	PF02627.20	gi|298675209|ref|YP_003726959.1|	-	1.9e-14	53.5	0.0	2.2e-14	53.3	0.0	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
OS-D	PF03392.13	gi|298675209|ref|YP_003726959.1|	-	0.039	14.0	0.0	0.044	13.9	0.0	1.2	1	0	0	1	1	1	0	Insect	pheromone-binding	family,	A10/OS-D
HTH_20	PF12840.7	gi|298675210|ref|YP_003726960.1|	-	1.1e-05	25.4	0.0	1.6e-05	24.9	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|298675210|ref|YP_003726960.1|	-	2.8e-05	23.9	0.0	4.2e-05	23.3	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.6	gi|298675210|ref|YP_003726960.1|	-	0.00063	19.7	0.8	0.001	19.0	0.8	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_34	PF13601.6	gi|298675210|ref|YP_003726960.1|	-	0.018	15.2	0.0	0.031	14.5	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF4364	PF14277.6	gi|298675210|ref|YP_003726960.1|	-	0.02	14.7	0.1	0.04	13.7	0.1	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
DUF3116	PF11313.8	gi|298675210|ref|YP_003726960.1|	-	0.057	13.3	1.0	0.12	12.3	1.0	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
DUF505	PF04458.12	gi|298675210|ref|YP_003726960.1|	-	0.065	11.6	1.0	0.069	11.5	1.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
DUF2608	PF11019.8	gi|298675211|ref|YP_003726961.1|	-	0.0038	16.7	1.1	0.78	9.2	0.1	2.8	1	1	2	3	3	3	2	Protein	of	unknown	function	(DUF2608)
Acid_PPase	PF12689.7	gi|298675211|ref|YP_003726961.1|	-	0.05	13.5	2.6	0.71	9.7	2.6	2.0	1	1	0	1	1	1	0	Acid	Phosphatase
FeoC	PF09012.10	gi|298675212|ref|YP_003726962.1|	-	3.3e-06	27.1	0.3	4.5e-06	26.7	0.3	1.2	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_24	PF13412.6	gi|298675212|ref|YP_003726962.1|	-	0.00015	21.2	0.1	0.00025	20.5	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.7	gi|298675212|ref|YP_003726962.1|	-	0.00016	21.6	0.0	0.00021	21.3	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|298675212|ref|YP_003726962.1|	-	0.00037	20.0	0.0	0.00064	19.2	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_11	PF08279.12	gi|298675212|ref|YP_003726962.1|	-	0.001	19.0	0.0	0.0015	18.4	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_45	PF14947.6	gi|298675212|ref|YP_003726962.1|	-	0.0026	17.7	1.5	0.023	14.7	1.5	1.9	1	1	0	1	1	1	1	Winged	helix-turn-helix
HTH_Mga	PF08280.11	gi|298675212|ref|YP_003726962.1|	-	0.0047	16.9	0.2	0.0066	16.5	0.2	1.3	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_5	PF01022.20	gi|298675212|ref|YP_003726962.1|	-	0.0055	16.5	0.5	0.013	15.4	0.1	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_34	PF13601.6	gi|298675212|ref|YP_003726962.1|	-	0.0074	16.4	0.1	0.66	10.2	0.0	2.0	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_AsnC-type	PF13404.6	gi|298675212|ref|YP_003726962.1|	-	0.0075	16.1	0.0	0.013	15.3	0.0	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
FaeA	PF04703.12	gi|298675212|ref|YP_003726962.1|	-	0.016	15.6	0.0	0.02	15.2	0.0	1.2	1	0	0	1	1	1	0	FaeA-like	protein
HTH_19	PF12844.7	gi|298675212|ref|YP_003726962.1|	-	0.024	14.7	0.2	0.042	13.9	0.2	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.19	gi|298675212|ref|YP_003726962.1|	-	0.058	13.3	0.0	0.067	13.1	0.0	1.2	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_38	PF13936.6	gi|298675212|ref|YP_003726962.1|	-	0.064	13.0	0.0	0.1	12.4	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_29	PF13551.6	gi|298675212|ref|YP_003726962.1|	-	0.074	13.1	0.0	0.15	12.1	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|298675212|ref|YP_003726962.1|	-	0.085	12.7	0.0	0.13	12.1	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_AraC	PF00165.23	gi|298675212|ref|YP_003726962.1|	-	0.086	13.0	0.0	0.14	12.3	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
DDRGK	PF09756.9	gi|298675212|ref|YP_003726962.1|	-	0.088	12.4	0.8	0.11	12.1	0.8	1.1	1	0	0	1	1	1	0	DDRGK	domain
HTH_10	PF04967.12	gi|298675212|ref|YP_003726962.1|	-	0.1	12.4	0.0	0.19	11.5	0.0	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_3	PF01381.22	gi|298675212|ref|YP_003726962.1|	-	0.14	12.2	0.0	0.21	11.7	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix
HTH_28	PF13518.6	gi|298675212|ref|YP_003726962.1|	-	0.15	12.2	0.0	0.23	11.6	0.0	1.4	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|298675212|ref|YP_003726962.1|	-	0.17	12.0	0.0	0.34	11.0	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HTH_35	PF13693.6	gi|298675212|ref|YP_003726962.1|	-	0.18	11.9	0.0	0.23	11.5	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
FeoB_N	PF02421.18	gi|298675214|ref|YP_003726964.1|	-	3.5e-68	228.0	2.8	5.3e-68	227.4	2.8	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Gate	PF07670.14	gi|298675214|ref|YP_003726964.1|	-	1.1e-44	151.3	13.6	7.6e-29	100.3	2.4	2.7	2	0	0	2	2	2	2	Nucleoside	recognition
FeoB_C	PF07664.12	gi|298675214|ref|YP_003726964.1|	-	4.5e-22	77.5	1.1	4.5e-22	77.5	1.1	3.9	4	0	0	4	4	4	1	Ferrous	iron	transport	protein	B	C	terminus
MMR_HSR1	PF01926.23	gi|298675214|ref|YP_003726964.1|	-	4.8e-19	68.5	0.3	9.5e-19	67.6	0.3	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_Cyto	PF17910.1	gi|298675214|ref|YP_003726964.1|	-	4.9e-18	65.5	0.7	8.6e-18	64.7	0.7	1.4	1	0	0	1	1	1	1	FeoB	cytosolic	helical	domain
SRPRB	PF09439.10	gi|298675214|ref|YP_003726964.1|	-	6.3e-05	22.5	0.1	0.00011	21.7	0.1	1.4	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
RsgA_GTPase	PF03193.16	gi|298675214|ref|YP_003726964.1|	-	0.0015	18.5	3.0	0.95	9.4	0.1	2.3	2	0	0	2	2	2	2	RsgA	GTPase
GTP_EFTU	PF00009.27	gi|298675214|ref|YP_003726964.1|	-	0.03	13.9	1.5	0.097	12.2	1.1	2.0	1	1	1	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
Ras	PF00071.22	gi|298675214|ref|YP_003726964.1|	-	0.046	13.3	0.3	0.38	10.3	0.3	2.4	1	1	0	1	1	1	0	Ras	family
Roc	PF08477.13	gi|298675214|ref|YP_003726964.1|	-	0.12	12.6	0.0	0.25	11.6	0.0	1.5	1	0	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Myco_arth_vir_N	PF09610.10	gi|298675214|ref|YP_003726964.1|	-	0.22	11.7	2.1	0.79	9.9	0.1	2.7	2	0	0	2	2	2	0	Mycoplasma	virulence	signal	region	(Myco_arth_vir_N)
MeaB	PF03308.16	gi|298675214|ref|YP_003726964.1|	-	0.27	10.2	1.2	0.73	8.8	0.1	2.1	2	1	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
FeoA	PF04023.14	gi|298675215|ref|YP_003726965.1|	-	7.7e-20	70.9	0.0	8.4e-20	70.8	0.0	1.0	1	0	0	1	1	1	1	FeoA	domain
Fe_dep_repress	PF01325.19	gi|298675216|ref|YP_003726966.1|	-	6.8e-18	64.6	0.5	1e-17	64.0	0.5	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.15	gi|298675216|ref|YP_003726966.1|	-	1.1e-15	57.4	0.0	2.7e-15	56.2	0.0	1.5	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
HTH_Crp_2	PF13545.6	gi|298675216|ref|YP_003726966.1|	-	0.00018	21.4	0.0	0.0003	20.7	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
LexA_DNA_bind	PF01726.16	gi|298675216|ref|YP_003726966.1|	-	0.00028	20.6	0.0	0.00054	19.7	0.0	1.5	1	0	0	1	1	1	1	LexA	DNA	binding	domain
HTH_24	PF13412.6	gi|298675216|ref|YP_003726966.1|	-	0.0016	17.9	0.0	0.0025	17.3	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
FeoC	PF09012.10	gi|298675216|ref|YP_003726966.1|	-	0.0019	18.2	0.0	0.0032	17.5	0.0	1.4	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
TrmB	PF01978.19	gi|298675216|ref|YP_003726966.1|	-	0.0048	16.7	0.1	0.0074	16.2	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.20	gi|298675216|ref|YP_003726966.1|	-	0.0068	16.7	0.0	0.011	16.1	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
MarR_2	PF12802.7	gi|298675216|ref|YP_003726966.1|	-	0.0098	15.8	0.0	0.016	15.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
B-block_TFIIIC	PF04182.12	gi|298675216|ref|YP_003726966.1|	-	0.037	14.2	0.0	0.06	13.5	0.0	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_DeoR	PF08220.12	gi|298675216|ref|YP_003726966.1|	-	0.038	13.7	0.0	0.078	12.7	0.0	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|298675216|ref|YP_003726966.1|	-	0.039	13.8	0.0	0.057	13.2	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Mnd1	PF03962.15	gi|298675216|ref|YP_003726966.1|	-	0.054	13.8	0.1	0.78	10.1	0.0	2.6	2	1	0	2	2	2	0	Mnd1	HTH	domain
Mrr_N	PF14338.6	gi|298675216|ref|YP_003726966.1|	-	0.063	13.4	0.0	0.14	12.3	0.0	1.6	1	0	0	1	1	1	0	Mrr	N-terminal	domain
MarR	PF01047.22	gi|298675216|ref|YP_003726966.1|	-	0.07	13.1	0.0	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	MarR	family
DUF5320	PF17253.2	gi|298675217|ref|YP_003726967.1|	-	3.9e-28	98.4	12.3	1.9e-27	96.2	12.3	1.8	1	1	0	1	1	1	1	Family	of	unknown	function	(DUF5320)
Snapin_Pallidin	PF14712.6	gi|298675217|ref|YP_003726967.1|	-	0.011	16.1	1.6	0.014	15.8	1.6	1.1	1	0	0	1	1	1	0	Snapin/Pallidin
Lipoprotein_20	PF13942.6	gi|298675217|ref|YP_003726967.1|	-	0.021	14.7	0.6	0.027	14.4	0.6	1.1	1	0	0	1	1	1	0	YfhG	lipoprotein
Matrilin_ccoil	PF10393.9	gi|298675217|ref|YP_003726967.1|	-	0.05	13.5	0.4	0.069	13.0	0.4	1.1	1	0	0	1	1	1	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
XhlA	PF10779.9	gi|298675217|ref|YP_003726967.1|	-	0.63	10.3	2.5	0.81	9.9	2.5	1.1	1	0	0	1	1	1	0	Haemolysin	XhlA
Aconitase_C	PF00694.19	gi|298675218|ref|YP_003726968.1|	-	5.1e-20	72.1	0.0	8.7e-20	71.4	0.0	1.4	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|298675218|ref|YP_003726968.1|	-	0.00038	20.1	0.2	0.0099	15.5	0.2	2.1	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
Iso_dh	PF00180.20	gi|298675220|ref|YP_003726970.1|	-	7.4e-100	334.5	0.1	9.1e-100	334.2	0.1	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
T2SSF	PF00482.23	gi|298675221|ref|YP_003726971.1|	-	2.8e-14	53.2	0.0	2.3e-10	40.5	0.0	4.1	4	1	1	5	5	5	2	Type	II	secretion	system	(T2SS),	protein	F
T2SSE	PF00437.20	gi|298675222|ref|YP_003726972.1|	-	2.1e-41	141.8	0.0	2.7e-41	141.4	0.0	1.1	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|298675222|ref|YP_003726972.1|	-	0.0043	16.8	0.0	0.0088	15.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|298675222|ref|YP_003726972.1|	-	0.021	15.2	0.0	0.049	14.0	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_23	PF13476.6	gi|298675222|ref|YP_003726972.1|	-	0.042	14.3	1.0	0.072	13.6	0.2	1.7	2	0	0	2	2	2	0	AAA	domain
Microtub_bd	PF16796.5	gi|298675222|ref|YP_003726972.1|	-	0.098	12.6	0.2	1.6	8.7	0.1	2.4	2	1	0	2	2	2	0	Microtubule	binding
AAA_7	PF12775.7	gi|298675222|ref|YP_003726972.1|	-	0.1	12.1	0.0	0.23	10.9	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_22	PF13401.6	gi|298675222|ref|YP_003726972.1|	-	0.12	12.7	0.0	0.57	10.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
ATPase	PF06745.13	gi|298675223|ref|YP_003726973.1|	-	1.5e-19	70.3	1.5	1.9e-19	69.9	1.5	1.0	1	0	0	1	1	1	1	KaiC
DnaB_C	PF03796.15	gi|298675223|ref|YP_003726973.1|	-	6.9e-06	25.6	0.3	1.6e-05	24.4	0.1	1.6	2	1	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
AAA_25	PF13481.6	gi|298675223|ref|YP_003726973.1|	-	4.9e-05	23.0	0.0	0.0001	21.9	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.12	gi|298675223|ref|YP_003726973.1|	-	6.6e-05	22.9	0.0	9.6e-05	22.4	0.0	1.3	1	1	0	1	1	1	1	NACHT	domain
AAA_18	PF13238.6	gi|298675223|ref|YP_003726973.1|	-	0.00056	20.5	0.0	0.00077	20.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.22	gi|298675223|ref|YP_003726973.1|	-	0.0011	18.7	0.0	0.0018	17.9	0.0	1.6	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA	PF00004.29	gi|298675223|ref|YP_003726973.1|	-	0.0017	18.8	0.2	0.0032	17.9	0.2	1.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|298675223|ref|YP_003726973.1|	-	0.0029	17.9	0.1	0.0055	17.0	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.14	gi|298675223|ref|YP_003726973.1|	-	0.0036	17.3	0.0	0.0071	16.3	0.0	1.5	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
DUF2075	PF09848.9	gi|298675223|ref|YP_003726973.1|	-	0.0047	16.2	0.2	0.0067	15.7	0.2	1.4	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
P-mevalo_kinase	PF04275.14	gi|298675223|ref|YP_003726973.1|	-	0.0057	16.6	0.1	2.3	8.2	0.0	2.4	2	0	0	2	2	2	1	Phosphomevalonate	kinase
KTI12	PF08433.10	gi|298675223|ref|YP_003726973.1|	-	0.0069	15.9	0.9	0.01	15.3	0.0	1.7	2	1	0	2	2	2	1	Chromatin	associated	protein	KTI12
IstB_IS21	PF01695.17	gi|298675223|ref|YP_003726973.1|	-	0.012	15.4	0.2	0.33	10.7	0.0	2.2	1	1	0	2	2	2	0	IstB-like	ATP	binding	protein
CobU	PF02283.16	gi|298675223|ref|YP_003726973.1|	-	0.012	15.2	0.3	0.45	10.1	0.1	2.1	2	0	0	2	2	2	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
AAA_14	PF13173.6	gi|298675223|ref|YP_003726973.1|	-	0.02	14.9	1.2	0.18	11.9	1.1	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|298675223|ref|YP_003726973.1|	-	0.027	14.6	0.0	0.032	14.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Torsin	PF06309.11	gi|298675223|ref|YP_003726973.1|	-	0.039	14.0	0.1	0.14	12.3	0.0	1.8	3	0	0	3	3	2	0	Torsin
Sigma54_activat	PF00158.26	gi|298675223|ref|YP_003726973.1|	-	0.052	13.2	0.0	0.095	12.4	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_16	PF13191.6	gi|298675223|ref|YP_003726973.1|	-	0.069	13.5	0.0	0.11	12.8	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Thymidylate_kin	PF02223.17	gi|298675223|ref|YP_003726973.1|	-	0.086	12.5	0.1	0.25	11.0	0.0	1.8	2	0	0	2	2	2	0	Thymidylate	kinase
APS_kinase	PF01583.20	gi|298675223|ref|YP_003726973.1|	-	0.16	11.9	0.2	0.33	10.8	0.0	1.6	2	0	0	2	2	2	0	Adenylylsulphate	kinase
Arch_flagellin	PF01917.16	gi|298675224|ref|YP_003726974.1|	-	1.5e-22	80.5	6.0	1.7e-22	80.3	6.0	1.0	1	0	0	1	1	1	1	Archaebacterial	flagellin
DUF4313	PF14190.6	gi|298675224|ref|YP_003726974.1|	-	0.064	13.2	0.1	0.26	11.3	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4313)
Arch_flagellin	PF01917.16	gi|298675225|ref|YP_003726975.1|	-	1.1e-08	35.4	5.2	1.6e-08	34.9	5.2	1.2	1	0	0	1	1	1	1	Archaebacterial	flagellin
CARDB	PF07705.11	gi|298675225|ref|YP_003726975.1|	-	0.0025	18.0	5.4	0.0042	17.3	4.5	1.8	1	1	0	1	1	1	1	CARDB
I-set	PF07679.16	gi|298675225|ref|YP_003726975.1|	-	0.033	14.2	0.7	1.2	9.2	0.2	2.1	2	0	0	2	2	2	0	Immunoglobulin	I-set	domain
DUF2393	PF09624.10	gi|298675225|ref|YP_003726975.1|	-	0.45	10.5	3.9	3.9	7.5	3.9	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2393)
Arch_fla_DE	PF04659.13	gi|298675226|ref|YP_003726976.1|	-	2.8e-28	97.6	0.1	7.5e-28	96.2	0.1	1.8	1	0	0	1	1	1	1	Archaeal	flagella	protein
FlaC_arch	PF05377.11	gi|298675226|ref|YP_003726976.1|	-	1.2e-21	76.9	18.4	8.1e-21	74.2	4.8	4.0	3	1	0	3	3	2	1	Flagella	accessory	protein	C	(FlaC)
PI3K_P85_iSH2	PF16454.5	gi|298675226|ref|YP_003726976.1|	-	8.3e-05	22.2	1.5	0.22	11.1	0.6	2.5	2	1	0	2	2	2	2	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
Sec34	PF04136.15	gi|298675226|ref|YP_003726976.1|	-	0.00069	19.5	11.6	0.025	14.4	3.2	2.6	2	0	0	2	2	2	2	Sec34-like	family
EzrA	PF06160.12	gi|298675226|ref|YP_003726976.1|	-	0.001	17.3	18.6	0.0074	14.5	7.9	2.2	2	0	0	2	2	2	2	Septation	ring	formation	regulator,	EzrA
BLOC1_2	PF10046.9	gi|298675226|ref|YP_003726976.1|	-	0.0012	19.1	16.7	0.27	11.5	4.4	3.3	2	1	1	3	3	3	3	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
ABC_tran_CTD	PF16326.5	gi|298675226|ref|YP_003726976.1|	-	0.0019	18.4	6.6	0.028	14.7	0.5	2.6	2	0	0	2	2	2	1	ABC	transporter	C-terminal	domain
ZapB	PF06005.12	gi|298675226|ref|YP_003726976.1|	-	0.0024	18.3	0.6	0.0024	18.3	0.6	3.4	2	1	2	4	4	2	1	Cell	division	protein	ZapB
Syntaxin_2	PF14523.6	gi|298675226|ref|YP_003726976.1|	-	0.0033	17.8	4.1	0.0033	17.8	4.1	2.5	2	0	0	2	2	2	1	Syntaxin-like	protein
DUF1664	PF07889.12	gi|298675226|ref|YP_003726976.1|	-	0.0035	17.4	11.1	0.05	13.6	0.6	2.7	3	0	0	3	3	2	2	Protein	of	unknown	function	(DUF1664)
Nsp1_C	PF05064.13	gi|298675226|ref|YP_003726976.1|	-	0.0056	16.5	15.7	0.0099	15.7	4.2	3.2	3	1	0	3	3	3	1	Nsp1-like	C-terminal	region
Spc7	PF08317.11	gi|298675226|ref|YP_003726976.1|	-	0.0057	15.6	10.9	0.14	11.0	1.2	2.2	2	0	0	2	2	2	2	Spc7	kinetochore	protein
MCPsignal	PF00015.21	gi|298675226|ref|YP_003726976.1|	-	0.0063	16.3	4.0	0.074	12.9	1.7	2.5	2	0	0	2	2	2	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
SHE3	PF17078.5	gi|298675226|ref|YP_003726976.1|	-	0.0091	15.7	14.5	0.054	13.2	14.5	2.0	1	1	0	1	1	1	1	SWI5-dependent	HO	expression	protein	3
DivIC	PF04977.15	gi|298675226|ref|YP_003726976.1|	-	0.0094	15.7	11.5	0.52	10.1	3.6	2.9	2	0	0	2	2	2	2	Septum	formation	initiator
Tektin	PF03148.14	gi|298675226|ref|YP_003726976.1|	-	0.012	14.4	9.4	0.026	13.3	0.9	2.1	2	0	0	2	2	2	0	Tektin	family
Atg14	PF10186.9	gi|298675226|ref|YP_003726976.1|	-	0.014	14.5	4.6	0.54	9.3	0.1	2.2	2	0	0	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Snapin_Pallidin	PF14712.6	gi|298675226|ref|YP_003726976.1|	-	0.015	15.7	11.8	0.35	11.3	0.9	3.6	2	2	2	4	4	4	0	Snapin/Pallidin
DUF16	PF01519.16	gi|298675226|ref|YP_003726976.1|	-	0.019	15.4	3.9	0.019	15.4	3.9	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
NPV_P10	PF05531.12	gi|298675226|ref|YP_003726976.1|	-	0.035	14.6	12.0	0.33	11.4	1.6	2.8	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
CENP-F_leu_zip	PF10473.9	gi|298675226|ref|YP_003726976.1|	-	0.036	14.1	14.8	0.21	11.6	1.8	2.5	2	1	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
CagA	PF03507.13	gi|298675226|ref|YP_003726976.1|	-	0.036	14.0	5.9	2.1	8.2	0.2	3.0	2	1	0	2	2	2	0	CagA	exotoxin
Taxilin	PF09728.9	gi|298675226|ref|YP_003726976.1|	-	0.072	12.2	10.4	1.2	8.3	0.7	2.2	1	1	0	2	2	2	0	Myosin-like	coiled-coil	protein
Tropomyosin_1	PF12718.7	gi|298675226|ref|YP_003726976.1|	-	0.076	13.2	15.6	0.18	12.0	3.7	2.8	2	1	0	2	2	2	0	Tropomyosin	like
Allexi_40kDa	PF05549.11	gi|298675226|ref|YP_003726976.1|	-	0.11	12.0	5.9	0.2	11.1	0.8	2.1	2	0	0	2	2	2	0	Allexivirus	40kDa	protein
DUF4164	PF13747.6	gi|298675226|ref|YP_003726976.1|	-	0.11	12.8	7.4	2.7	8.3	0.5	3.5	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4164)
Syntaxin-6_N	PF09177.11	gi|298675226|ref|YP_003726976.1|	-	0.12	13.0	16.3	0.08	13.5	2.9	2.8	2	1	1	3	3	2	0	Syntaxin	6,	N-terminal
YabA	PF06156.13	gi|298675226|ref|YP_003726976.1|	-	0.14	12.8	11.5	2.4	8.8	2.1	2.7	1	1	1	2	2	2	0	Initiation	control	protein	YabA
PTRF_SDPR	PF15237.6	gi|298675226|ref|YP_003726976.1|	-	0.14	11.7	7.9	0.89	9.1	2.5	2.3	1	1	0	2	2	2	0	PTRF/SDPR	family
DUF4407	PF14362.6	gi|298675226|ref|YP_003726976.1|	-	0.16	11.3	5.1	0.37	10.1	5.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF2959	PF11172.8	gi|298675226|ref|YP_003726976.1|	-	0.17	12.0	6.7	0.58	10.3	0.4	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2959)
GAS	PF13851.6	gi|298675226|ref|YP_003726976.1|	-	0.18	11.2	12.8	3.3	7.0	2.3	2.4	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Nup54	PF13874.6	gi|298675226|ref|YP_003726976.1|	-	0.21	11.7	6.6	7.3	6.7	6.6	2.3	1	1	0	1	1	1	0	Nucleoporin	complex	subunit	54
LOH1CR12	PF10158.9	gi|298675226|ref|YP_003726976.1|	-	0.21	11.6	6.9	5.1	7.1	0.2	2.3	1	1	0	2	2	2	0	Tumour	suppressor	protein
Occludin_ELL	PF07303.13	gi|298675226|ref|YP_003726976.1|	-	0.28	11.9	10.7	2.3	9.0	1.1	3.3	3	1	0	3	3	2	0	Occludin	homology	domain
DUF1515	PF07439.11	gi|298675226|ref|YP_003726976.1|	-	0.29	11.2	2.1	18	5.4	0.1	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1515)
DUF3450	PF11932.8	gi|298675226|ref|YP_003726976.1|	-	0.29	10.4	11.9	0.76	9.0	0.5	2.3	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3450)
AAA_13	PF13166.6	gi|298675226|ref|YP_003726976.1|	-	0.33	9.5	18.4	1.3	7.5	18.4	1.7	1	1	0	1	1	1	0	AAA	domain
DUF4201	PF13870.6	gi|298675226|ref|YP_003726976.1|	-	0.34	10.6	10.7	1.6	8.4	1.6	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4201)
V_ATPase_I	PF01496.19	gi|298675226|ref|YP_003726976.1|	-	0.37	8.7	15.2	0.054	11.4	4.2	2.1	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
LPP20	PF02169.16	gi|298675226|ref|YP_003726976.1|	-	0.39	11.1	9.7	3	8.2	2.1	2.6	2	0	0	2	2	2	0	LPP20	lipoprotein
CREPT	PF16566.5	gi|298675226|ref|YP_003726976.1|	-	0.45	10.7	5.5	7.6	6.7	0.7	2.5	2	0	0	2	2	2	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
DUF948	PF06103.11	gi|298675226|ref|YP_003726976.1|	-	0.46	10.8	8.9	1.4	9.2	0.5	3.4	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
APG6_N	PF17675.1	gi|298675226|ref|YP_003726976.1|	-	0.46	11.0	14.0	2.8	8.5	0.4	2.4	2	0	0	2	2	2	0	Apg6	coiled-coil	region
CENP-H	PF05837.12	gi|298675226|ref|YP_003726976.1|	-	0.51	10.8	12.2	1.9	8.9	4.4	2.6	1	1	1	2	2	2	0	Centromere	protein	H	(CENP-H)
Ax_dynein_light	PF10211.9	gi|298675226|ref|YP_003726976.1|	-	0.53	10.2	10.2	1.8	8.5	1.6	2.5	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
EMP24_GP25L	PF01105.24	gi|298675226|ref|YP_003726976.1|	-	0.56	10.1	6.5	1.6	8.6	0.5	2.5	2	0	0	2	2	2	0	emp24/gp25L/p24	family/GOLD
PspA_IM30	PF04012.12	gi|298675226|ref|YP_003726976.1|	-	0.59	9.7	5.5	1.1	8.8	1.5	2.2	2	0	0	2	2	2	0	PspA/IM30	family
Mod_r	PF07200.13	gi|298675226|ref|YP_003726976.1|	-	0.64	10.1	11.8	0.6	10.2	3.0	2.4	2	0	0	2	2	2	0	Modifier	of	rudimentary	(Mod(r))	protein
Lectin_N	PF03954.14	gi|298675226|ref|YP_003726976.1|	-	0.7	9.6	4.3	0.72	9.6	0.4	2.3	2	0	0	2	2	2	0	Hepatic	lectin,	N-terminal	domain
4HB_MCP_1	PF12729.7	gi|298675226|ref|YP_003726976.1|	-	0.72	9.4	12.0	0.88	9.1	1.5	2.5	2	0	0	2	2	2	0	Four	helix	bundle	sensory	module	for	signal	transduction
TMF_TATA_bd	PF12325.8	gi|298675226|ref|YP_003726976.1|	-	0.79	10.0	13.2	2.8	8.2	5.9	2.6	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
TACC_C	PF05010.14	gi|298675226|ref|YP_003726976.1|	-	0.81	9.4	12.9	3.5	7.4	0.9	2.6	1	1	1	2	2	2	0	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
Laminin_I	PF06008.14	gi|298675226|ref|YP_003726976.1|	-	0.81	9.3	12.9	3.5	7.3	5.1	2.3	1	1	0	2	2	2	0	Laminin	Domain	I
DASH_Dad2	PF08654.10	gi|298675226|ref|YP_003726976.1|	-	0.81	10.1	6.7	1.2	9.6	0.4	3.3	2	1	1	3	3	3	0	DASH	complex	subunit	Dad2
HBM	PF16591.5	gi|298675226|ref|YP_003726976.1|	-	0.91	8.9	7.1	0.44	9.9	0.9	2.1	2	0	0	2	2	2	0	Helical	bimodular	sensor	domain
AKNA	PF12443.8	gi|298675226|ref|YP_003726976.1|	-	0.96	10.1	4.8	10	6.8	0.3	2.6	2	0	0	2	2	2	0	AT-hook-containing	transcription	factor
Prefoldin	PF02996.17	gi|298675226|ref|YP_003726976.1|	-	0.97	9.4	10.5	5.5	6.9	1.4	3.3	2	1	1	3	3	3	0	Prefoldin	subunit
DHR10	PF18595.1	gi|298675226|ref|YP_003726976.1|	-	1	9.5	10.4	1.5	8.9	2.1	2.4	2	1	0	2	2	2	0	Designed	helical	repeat	protein	10	domain
TolA_bind_tri	PF16331.5	gi|298675226|ref|YP_003726976.1|	-	1.1	9.3	6.0	1.7	8.8	0.3	2.7	2	0	0	2	2	2	0	TolA	binding	protein	trimerisation
Blo-t-5	PF11642.8	gi|298675226|ref|YP_003726976.1|	-	1.1	9.2	7.4	1.4	8.9	1.3	2.3	2	0	0	2	2	2	0	Mite	allergen	Blo	t	5
Exonuc_VII_L	PF02601.15	gi|298675226|ref|YP_003726976.1|	-	1.2	8.6	7.1	6.4	6.3	7.1	1.9	1	1	0	1	1	1	0	Exonuclease	VII,	large	subunit
JIP_LZII	PF16471.5	gi|298675226|ref|YP_003726976.1|	-	1.2	9.3	8.9	1.1	9.5	1.5	3.3	2	2	2	4	4	2	0	JNK-interacting	protein	leucine	zipper	II
CLZ	PF16526.5	gi|298675226|ref|YP_003726976.1|	-	1.3	9.5	8.9	5.8	7.3	0.3	3.7	2	2	1	3	3	3	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
DUF641	PF04859.12	gi|298675226|ref|YP_003726976.1|	-	1.4	9.2	6.2	0.6	10.4	0.7	2.3	2	0	0	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
Jnk-SapK_ap_N	PF09744.9	gi|298675226|ref|YP_003726976.1|	-	1.6	9.0	13.0	5	7.3	2.3	2.4	2	0	0	2	2	2	0	JNK_SAPK-associated	protein-1
T3SSipB	PF16535.5	gi|298675226|ref|YP_003726976.1|	-	1.8	9.0	8.5	2.4	8.6	0.3	2.5	3	0	0	3	3	2	0	Type	III	cell	invasion	protein	SipB
ATG16	PF08614.11	gi|298675226|ref|YP_003726976.1|	-	2	8.6	11.6	5.6	7.1	4.9	2.3	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
GCN5L1	PF06320.13	gi|298675226|ref|YP_003726976.1|	-	2	8.6	8.8	8	6.7	2.9	2.9	1	1	1	3	3	3	0	GCN5-like	protein	1	(GCN5L1)
TPR_MLP1_2	PF07926.12	gi|298675226|ref|YP_003726976.1|	-	2	8.5	12.5	4.2	7.5	1.7	2.8	2	1	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
UPF0184	PF03670.13	gi|298675226|ref|YP_003726976.1|	-	2.1	8.8	8.4	0.59	10.6	1.5	2.8	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0184)
UPF0242	PF06785.11	gi|298675226|ref|YP_003726976.1|	-	2.1	8.4	17.3	2.2	8.3	8.2	2.3	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
BRE1	PF08647.11	gi|298675226|ref|YP_003726976.1|	-	2.2	8.4	12.4	0.77	9.9	3.3	2.8	2	1	0	2	2	2	0	BRE1	E3	ubiquitin	ligase
SIKE	PF05769.11	gi|298675226|ref|YP_003726976.1|	-	2.4	8.1	15.2	0.43	10.5	0.9	3.0	3	1	0	3	3	2	0	SIKE	family
USP8_interact	PF08941.10	gi|298675226|ref|YP_003726976.1|	-	2.4	7.9	4.6	4.9	6.9	1.5	2.2	2	0	0	2	2	2	0	USP8	interacting
FTA4	PF13093.6	gi|298675226|ref|YP_003726976.1|	-	2.5	7.9	12.3	8.1	6.3	12.3	1.8	1	1	0	1	1	1	0	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
HemX	PF04375.14	gi|298675226|ref|YP_003726976.1|	-	2.6	7.3	10.5	8.6	5.5	0.3	2.4	1	1	0	2	2	2	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
DASH_Dad3	PF08656.10	gi|298675226|ref|YP_003726976.1|	-	2.7	8.1	8.0	0.77	9.9	1.4	3.0	2	2	1	3	3	3	0	DASH	complex	subunit	Dad3
UPF0449	PF15136.6	gi|298675226|ref|YP_003726976.1|	-	2.9	8.4	7.4	8.3	7.0	0.9	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0449
DUF4446	PF14584.6	gi|298675226|ref|YP_003726976.1|	-	2.9	7.8	10.7	10	6.1	1.8	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF4446)
Swi5	PF07061.11	gi|298675226|ref|YP_003726976.1|	-	3.2	7.9	8.4	14	5.8	1.1	2.8	2	1	0	2	2	2	0	Swi5
Prefoldin_2	PF01920.20	gi|298675226|ref|YP_003726976.1|	-	3.4	7.7	13.4	2	8.4	2.8	3.0	2	1	1	3	3	3	0	Prefoldin	subunit
bZIP_1	PF00170.21	gi|298675226|ref|YP_003726976.1|	-	3.6	7.8	13.1	1.3	9.2	1.5	3.1	3	1	0	3	3	2	0	bZIP	transcription	factor
DUF4795	PF16043.5	gi|298675226|ref|YP_003726976.1|	-	4.4	6.9	14.2	0.7	9.5	2.8	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4795)
THOC7	PF05615.13	gi|298675226|ref|YP_003726976.1|	-	4.6	7.5	12.2	0.5	10.6	2.9	3.0	3	1	0	3	3	3	0	Tho	complex	subunit	7
Laminin_II	PF06009.12	gi|298675226|ref|YP_003726976.1|	-	4.8	7.2	17.7	0.93	9.5	1.1	2.6	2	1	1	3	3	2	0	Laminin	Domain	II
LPP	PF04728.13	gi|298675226|ref|YP_003726976.1|	-	5	7.6	11.4	15	6.1	0.2	4.1	3	2	0	3	3	3	0	Lipoprotein	leucine-zipper
DUF724	PF05266.14	gi|298675226|ref|YP_003726976.1|	-	5.5	6.8	15.7	0.34	10.7	4.6	2.7	2	1	1	3	3	2	0	Protein	of	unknown	function	(DUF724)
ADIP	PF11559.8	gi|298675226|ref|YP_003726976.1|	-	6.6	6.8	13.5	6.7	6.8	2.3	2.5	2	1	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
PI_PP_I	PF18363.1	gi|298675226|ref|YP_003726976.1|	-	7.6	6.8	7.7	30	4.9	0.5	3.1	3	0	0	3	3	3	0	Phosphoinositide	phosphatase	insertion	domain
Prominin	PF05478.11	gi|298675226|ref|YP_003726976.1|	-	7.8	4.3	10.9	3.8	5.3	2.1	1.7	1	1	1	2	2	2	0	Prominin
SOAR	PF16533.5	gi|298675226|ref|YP_003726976.1|	-	8.4	6.4	8.8	56	3.8	1.2	3.8	3	2	0	3	3	3	0	STIM1	Orai1-activating	region
DUF4200	PF13863.6	gi|298675226|ref|YP_003726976.1|	-	9.9	6.6	14.0	56	4.2	7.4	3.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4200)
TMF_DNA_bd	PF12329.8	gi|298675226|ref|YP_003726976.1|	-	10	6.2	15.1	2	8.5	2.3	3.2	2	2	1	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
Response_reg	PF00072.24	gi|298675227|ref|YP_003726977.1|	-	1e-27	96.5	1.3	1e-27	96.5	1.3	2.0	3	0	0	3	3	3	1	Response	regulator	receiver	domain
DUF835	PF05763.12	gi|298675227|ref|YP_003726977.1|	-	0.004	16.9	0.4	0.013	15.2	0.1	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF835)
tRNA-synt_2c	PF01411.19	gi|298675228|ref|YP_003726978.1|	-	4.4e-138	461.2	0.0	5.7e-138	460.8	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
DHHA1	PF02272.19	gi|298675228|ref|YP_003726978.1|	-	2.6e-26	92.7	2.8	2.6e-26	92.7	2.8	2.0	2	0	0	2	2	2	1	DHHA1	domain
tRNA_SAD	PF07973.14	gi|298675228|ref|YP_003726978.1|	-	3.2e-12	46.3	0.2	8.7e-12	44.9	0.2	1.8	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DUF4047	PF13256.6	gi|298675228|ref|YP_003726978.1|	-	0.44	10.8	6.4	9.8	6.4	0.3	3.7	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4047)
RRF	PF01765.19	gi|298675228|ref|YP_003726978.1|	-	0.63	10.0	7.4	3.1	7.7	1.3	2.8	2	0	0	2	2	2	0	Ribosome	recycling	factor
ZapB	PF06005.12	gi|298675228|ref|YP_003726978.1|	-	1.4	9.5	4.9	6	7.4	0.5	2.8	2	0	0	2	2	2	0	Cell	division	protein	ZapB
WXG100	PF06013.12	gi|298675228|ref|YP_003726978.1|	-	2.5	8.4	4.4	4.3	7.6	0.6	3.0	3	0	0	3	3	3	0	Proteins	of	100	residues	with	WXG
Not1	PF04054.15	gi|298675229|ref|YP_003726979.1|	-	0.0046	15.9	0.2	0.0077	15.2	0.2	1.3	1	0	0	1	1	1	1	CCR4-Not	complex	component,	Not1
Glyco_hydro_4C	PF11975.8	gi|298675229|ref|YP_003726979.1|	-	0.07	13.2	0.3	0.15	12.1	0.1	1.6	1	1	1	2	2	2	0	Family	4	glycosyl	hydrolase	C-terminal	domain
OrfB_IS605	PF01385.19	gi|298675230|ref|YP_003726980.1|	-	1.4e-26	93.1	2.1	1.4e-26	93.1	2.1	1.8	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675230|ref|YP_003726980.1|	-	4.8e-24	84.1	0.4	1.1e-23	83.0	0.4	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298675230|ref|YP_003726980.1|	-	1.1e-20	72.8	1.7	2.6e-20	71.6	1.7	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298675230|ref|YP_003726980.1|	-	0.0083	16.3	0.3	0.019	15.1	0.3	1.6	1	0	0	1	1	1	1	Piccolo	Zn-finger
MapZ_EC1	PF18041.1	gi|298675230|ref|YP_003726980.1|	-	0.041	14.1	7.8	0.28	11.4	3.0	2.4	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
DDE_Tnp_IS240	PF13610.6	gi|298675230|ref|YP_003726980.1|	-	0.084	13.1	2.2	0.48	10.6	0.2	2.5	2	0	0	2	2	2	0	DDE	domain
Phage_GP20	PF06810.11	gi|298675230|ref|YP_003726980.1|	-	0.086	12.6	7.7	0.26	11.1	2.8	2.4	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
HypA	PF01155.19	gi|298675230|ref|YP_003726980.1|	-	0.22	11.5	0.7	0.66	10.0	0.1	2.1	3	0	0	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-UDP	PF14569.6	gi|298675230|ref|YP_003726980.1|	-	0.33	11.1	1.6	1.7	8.8	1.6	2.1	1	1	0	1	1	1	0	Zinc-binding	RING-finger
ZapB	PF06005.12	gi|298675230|ref|YP_003726980.1|	-	1.7	9.1	6.6	6.1	7.4	3.0	2.5	2	0	0	2	2	2	0	Cell	division	protein	ZapB
DivIC	PF04977.15	gi|298675230|ref|YP_003726980.1|	-	2.6	7.9	6.9	20	5.0	0.2	3.0	2	1	0	2	2	2	0	Septum	formation	initiator
GDE_C	PF06202.14	gi|298675231|ref|YP_003726981.1|	-	8e-132	439.8	0.0	1.1e-131	439.3	0.0	1.1	1	0	0	1	1	1	1	Amylo-alpha-1,6-glucosidase
GDE_N	PF12439.8	gi|298675231|ref|YP_003726981.1|	-	2.2e-75	252.8	0.7	3.2e-75	252.3	0.7	1.2	1	0	0	1	1	1	1	Glycogen	debranching	enzyme	N	terminal
Glyco_hydro_100	PF12899.7	gi|298675231|ref|YP_003726981.1|	-	3.7e-07	29.2	0.0	0.0027	16.4	0.0	2.3	2	0	0	2	2	2	2	Alkaline	and	neutral	invertase
Bac_rhamnosid6H	PF17389.2	gi|298675231|ref|YP_003726981.1|	-	0.005	16.2	0.0	0.0073	15.6	0.0	1.2	1	0	0	1	1	1	1	Bacterial	alpha-L-rhamnosidase	6	hairpin	glycosidase	domain
Glyco_hydro_15	PF00723.21	gi|298675232|ref|YP_003726982.1|	-	1.3e-14	53.9	0.2	3.1e-08	32.8	0.8	3.6	3	1	1	4	4	4	3	Glycosyl	hydrolases	family	15
DUF3938	PF13074.6	gi|298675232|ref|YP_003726982.1|	-	0.013	15.7	0.0	0.03	14.6	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3938)
APCDDC	PF14921.6	gi|298675232|ref|YP_003726982.1|	-	0.2	11.0	0.5	0.39	10.1	0.5	1.4	1	0	0	1	1	1	0	Adenomatosis	polyposis	coli	down-regulated	1
V4R	PF02830.18	gi|298675233|ref|YP_003726983.1|	-	2.2e-14	53.2	0.3	3.8e-14	52.4	0.3	1.3	1	0	0	1	1	1	1	V4R	domain
ACT_4	PF13291.6	gi|298675233|ref|YP_003726983.1|	-	0.013	16.1	0.0	0.029	15.0	0.0	1.5	1	0	0	1	1	1	0	ACT	domain
ACT	PF01842.25	gi|298675233|ref|YP_003726983.1|	-	0.054	13.3	0.0	0.11	12.3	0.0	1.6	1	0	0	1	1	1	0	ACT	domain
DUF1421	PF07223.11	gi|298675233|ref|YP_003726983.1|	-	0.13	12.1	0.0	0.26	11.1	0.0	1.5	1	0	0	1	1	1	0	UBA-like	domain	(DUF1421)
Glyco_hydro_57	PF03065.15	gi|298675234|ref|YP_003726984.1|	-	5.5e-64	216.4	0.0	7.6e-64	216.0	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	57
Polysacc_deac_1	PF01522.21	gi|298675234|ref|YP_003726984.1|	-	6.2e-07	29.3	0.0	1.2e-06	28.4	0.0	1.5	1	0	0	1	1	1	1	Polysaccharide	deacetylase
DUF2733	PF10813.8	gi|298675234|ref|YP_003726984.1|	-	0.01	15.6	0.0	0.028	14.2	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2733)
DUF1241	PF06840.11	gi|298675234|ref|YP_003726984.1|	-	0.032	13.9	0.0	0.055	13.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1241)
Glyco_hydro_57	PF03065.15	gi|298675235|ref|YP_003726985.1|	-	7.8e-46	156.8	2.6	1.2e-45	156.1	2.6	1.3	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	57
CheD	PF03975.13	gi|298675236|ref|YP_003726986.1|	-	1.3e-32	112.2	0.1	1.6e-32	111.9	0.1	1.1	1	0	0	1	1	1	1	CheD	chemotactic	sensory	transduction
Cu-oxidase_4	PF02578.15	gi|298675236|ref|YP_003726986.1|	-	0.0084	15.7	0.0	0.015	14.9	0.0	1.5	2	0	0	2	2	2	1	Multi-copper	polyphenol	oxidoreductase	laccase
CheC	PF04509.12	gi|298675237|ref|YP_003726987.1|	-	1.4e-18	66.5	0.7	1e-11	44.5	0.0	2.9	3	0	0	3	3	3	2	CheC-like	family
CheX	PF13690.6	gi|298675237|ref|YP_003726987.1|	-	5.6e-15	55.3	3.5	4.6e-10	39.5	0.4	2.4	3	0	0	3	3	3	2	Chemotaxis	phosphatase	CheX
tRNA-synt_1b	PF00579.25	gi|298675238|ref|YP_003726988.1|	-	3.9e-55	187.2	0.0	4.6e-55	187.0	0.0	1.0	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
tRNA-synt_1g	PF09334.11	gi|298675238|ref|YP_003726988.1|	-	0.065	12.0	0.1	0.16	10.7	0.0	1.6	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.18	gi|298675238|ref|YP_003726988.1|	-	0.086	11.7	0.0	3.5	6.4	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
DUF3654	PF12376.8	gi|298675239|ref|YP_003726989.1|	-	0.0065	16.7	0.9	0.017	15.3	0.9	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3654)
YlqD	PF11068.8	gi|298675239|ref|YP_003726989.1|	-	0.052	13.9	0.9	0.48	10.8	0.0	2.7	3	0	0	3	3	3	0	YlqD	protein
DUF3450	PF11932.8	gi|298675239|ref|YP_003726989.1|	-	0.057	12.7	0.7	3.9	6.7	0.2	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3450)
DUF3375	PF11855.8	gi|298675239|ref|YP_003726989.1|	-	0.072	12.0	2.0	0.21	10.4	0.5	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3375)
PCRF	PF03462.18	gi|298675239|ref|YP_003726989.1|	-	0.13	12.1	1.6	0.27	11.1	1.6	1.5	1	0	0	1	1	1	0	PCRF	domain
Fib_alpha	PF08702.10	gi|298675239|ref|YP_003726989.1|	-	0.17	12.1	5.2	0.46	10.7	5.2	1.8	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DUF1664	PF07889.12	gi|298675239|ref|YP_003726989.1|	-	0.35	10.9	4.9	10	6.2	0.3	3.1	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF1664)
DUF327	PF03885.13	gi|298675239|ref|YP_003726989.1|	-	0.39	10.7	6.3	0.11	12.5	1.4	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF327)
BLOC1_2	PF10046.9	gi|298675239|ref|YP_003726989.1|	-	1.3	9.4	9.4	0.47	10.8	0.8	3.3	2	1	1	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Prefoldin_2	PF01920.20	gi|298675239|ref|YP_003726989.1|	-	2	8.4	7.5	6.4	6.8	0.7	2.5	2	0	0	2	2	2	0	Prefoldin	subunit
Tropomyosin_1	PF12718.7	gi|298675239|ref|YP_003726989.1|	-	3	8.0	8.4	18	5.5	8.6	2.0	1	1	0	1	1	1	0	Tropomyosin	like
AI-2E_transport	PF01594.16	gi|298675240|ref|YP_003726990.1|	-	1.4e-49	169.0	44.6	1.6e-49	168.8	44.6	1.0	1	0	0	1	1	1	1	AI-2E	family	transporter
P-II	PF00543.22	gi|298675241|ref|YP_003726991.1|	-	5.6e-05	23.7	0.3	7.2e-05	23.3	0.3	1.1	1	0	0	1	1	1	1	Nitrogen	regulatory	protein	P-II
DUF1538	PF07556.11	gi|298675242|ref|YP_003726992.1|	-	2.1e-71	239.6	21.9	2.5e-71	239.4	21.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1538)
DUF1304	PF06993.12	gi|298675242|ref|YP_003726992.1|	-	3.4	7.7	12.8	1.3	9.0	0.5	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1304)
DUF1538	PF07556.11	gi|298675243|ref|YP_003726993.1|	-	1.7e-66	223.5	31.9	2e-66	223.3	31.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1538)
Na_H_Exchanger	PF00999.21	gi|298675244|ref|YP_003726994.1|	-	4.5e-69	233.1	54.4	5.8e-69	232.7	54.4	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.18	gi|298675244|ref|YP_003726994.1|	-	4.1e-25	88.3	0.1	1.5e-24	86.5	0.1	2.0	2	0	0	2	2	2	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|298675244|ref|YP_003726994.1|	-	2.8e-17	62.3	0.0	8.3e-17	60.8	0.0	1.9	1	0	0	1	1	1	1	TrkA-C	domain
CAAD	PF14159.6	gi|298675244|ref|YP_003726994.1|	-	4.1	7.3	10.7	4.9	7.0	0.1	4.2	3	0	0	3	3	3	0	CAAD	domains	of	cyanobacterial	aminoacyl-tRNA	synthetase
SSF	PF00474.17	gi|298675245|ref|YP_003726995.1|	-	1.9e-98	330.0	23.9	3e-98	329.4	23.9	1.3	1	0	0	1	1	1	1	Sodium:solute	symporter	family
OrfB_IS605	PF01385.19	gi|298675246|ref|YP_003726996.1|	-	3e-21	75.8	0.3	1.5e-20	73.6	0.0	2.3	2	1	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675246|ref|YP_003726996.1|	-	2.8e-10	40.0	0.3	1e-09	38.2	0.1	2.1	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
DUF919	PF06034.11	gi|298675246|ref|YP_003726996.1|	-	0.005	16.6	0.5	0.012	15.4	0.5	1.6	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
RuvX	PF03652.15	gi|298675246|ref|YP_003726996.1|	-	0.12	12.8	0.0	0.27	11.6	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	resolvase
Acyl_transf_3	PF01757.22	gi|298675247|ref|YP_003726997.1|	-	0.00029	20.0	3.8	0.00038	19.6	3.8	1.0	1	0	0	1	1	1	1	Acyltransferase	family
DUF2427	PF10348.9	gi|298675247|ref|YP_003726997.1|	-	0.017	14.9	5.3	0.29	10.9	2.5	2.2	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2427)
LMBR1	PF04791.16	gi|298675247|ref|YP_003726997.1|	-	0.04	12.8	1.9	0.15	10.9	0.0	2.0	2	0	0	2	2	2	0	LMBR1-like	membrane	protein
O-antigen_lig	PF13425.6	gi|298675247|ref|YP_003726997.1|	-	0.07	11.9	4.0	0.15	10.8	4.0	1.5	1	1	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
Amastin	PF07344.11	gi|298675247|ref|YP_003726997.1|	-	0.072	12.9	1.2	0.14	12.0	1.2	1.5	1	0	0	1	1	1	0	Amastin	surface	glycoprotein
Urate_ox_N	PF06181.11	gi|298675247|ref|YP_003726997.1|	-	0.078	12.3	0.6	0.35	10.2	0.0	1.8	1	1	1	2	2	2	0	Urate	oxidase	N-terminal
TauE	PF01925.19	gi|298675247|ref|YP_003726997.1|	-	0.19	11.4	7.4	0.39	10.3	7.4	1.4	1	1	0	1	1	1	0	Sulfite	exporter	TauE/SafE
EI24	PF07264.11	gi|298675247|ref|YP_003726997.1|	-	0.33	11.2	3.5	0.44	10.8	3.5	1.1	1	0	0	1	1	1	0	Etoposide-induced	protein	2.4	(EI24)
DUF1129	PF06570.11	gi|298675247|ref|YP_003726997.1|	-	0.35	10.3	4.7	1.5	8.2	4.0	2.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1129)
TctB	PF07331.11	gi|298675247|ref|YP_003726997.1|	-	0.92	9.8	8.1	2	8.7	8.1	1.5	1	1	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
PrgI	PF12666.7	gi|298675247|ref|YP_003726997.1|	-	1.1	10.0	4.3	24	5.7	1.1	2.3	2	0	0	2	2	2	0	PrgI	family	protein
DUF485	PF04341.12	gi|298675247|ref|YP_003726997.1|	-	1.2	9.1	4.2	9.3	6.3	0.1	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF485
GTA_holin_3TM	PF11351.8	gi|298675247|ref|YP_003726997.1|	-	1.5	9.4	4.5	7.2	7.2	0.0	2.3	2	0	0	2	2	2	0	Holin	of	3TMs,	for	gene-transfer	release
DUF4118	PF13493.6	gi|298675247|ref|YP_003726997.1|	-	1.9	8.3	12.3	0.48	10.2	4.8	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4118)
DUF3792	PF12670.7	gi|298675247|ref|YP_003726997.1|	-	3.7	7.8	11.9	34	4.6	11.8	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3792)
Ferric_reduct	PF01794.19	gi|298675248|ref|YP_003726998.1|	-	3.8e-05	23.8	7.7	3.8e-05	23.8	7.7	2.2	1	1	2	3	3	3	1	Ferric	reductase	like	transmembrane	component
ThrE	PF06738.12	gi|298675248|ref|YP_003726998.1|	-	1.9	7.8	8.1	0.22	10.9	3.5	1.6	2	0	0	2	2	2	0	Putative	threonine/serine	exporter
Glucos_trans_II	PF14264.6	gi|298675248|ref|YP_003726998.1|	-	2	7.7	23.2	15	4.8	23.9	2.0	1	1	0	1	1	1	0	Glucosyl	transferase	GtrII
DUF373	PF04123.13	gi|298675248|ref|YP_003726998.1|	-	4.1	6.8	13.6	5.4	6.4	13.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
FeoB_associated	PF12669.7	gi|298675248|ref|YP_003726998.1|	-	9.5	6.7	8.5	0.61	10.5	0.5	2.8	3	0	0	3	3	3	0	FeoB-associated	Cys-rich	membrane	protein
PAS_3	PF08447.12	gi|298675249|ref|YP_003726999.1|	-	1e-50	170.0	5.7	2.4e-18	66.2	0.2	3.6	3	0	0	3	3	3	3	PAS	fold
PAS_9	PF13426.7	gi|298675249|ref|YP_003726999.1|	-	1.1e-14	54.5	2.6	5.7e-05	23.3	0.4	3.6	3	0	0	3	3	3	3	PAS	domain
PAS	PF00989.25	gi|298675249|ref|YP_003726999.1|	-	6.2e-10	39.1	0.1	4.3e-05	23.5	0.0	3.6	4	0	0	4	4	4	2	PAS	fold
GAF_2	PF13185.6	gi|298675249|ref|YP_003726999.1|	-	2.4e-06	27.9	0.0	4.8e-06	26.9	0.0	1.5	1	0	0	1	1	1	1	GAF	domain
PAS_11	PF14598.6	gi|298675249|ref|YP_003726999.1|	-	0.00014	21.9	0.0	0.0019	18.3	0.0	2.5	2	0	0	2	2	2	1	PAS	domain
PAS_4	PF08448.10	gi|298675249|ref|YP_003726999.1|	-	0.0025	18.1	0.0	3.6	7.9	0.0	3.1	3	0	0	3	3	3	2	PAS	fold
DUF3823	PF12866.7	gi|298675249|ref|YP_003726999.1|	-	0.0085	16.4	0.6	1.1	9.6	0.1	3.4	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF3823)	N-terminal	domain
Raptor_N	PF14538.6	gi|298675249|ref|YP_003726999.1|	-	0.013	15.4	0.0	0.032	14.2	0.0	1.6	1	0	0	1	1	1	0	Raptor	N-terminal	CASPase	like	domain
LPD15	PF18828.1	gi|298675249|ref|YP_003726999.1|	-	0.02	14.8	0.1	2.4	8.1	0.0	2.8	2	0	0	2	2	2	0	Large	polyvalent-protein-associated	domain	15
TUDOR_5	PF18359.1	gi|298675249|ref|YP_003726999.1|	-	0.021	14.5	0.1	0.44	10.3	0.0	2.7	2	0	0	2	2	2	0	Histone	methyltransferase	Tudor	domain	1
Desulfoferrodox	PF01880.18	gi|298675250|ref|YP_003727000.1|	-	1.1e-28	99.6	5.0	3.8e-27	94.7	5.0	2.1	1	1	0	1	1	1	1	Desulfoferrodoxin
FtsX	PF02687.21	gi|298675251|ref|YP_003727001.1|	-	0.27	11.7	6.6	2.4	8.7	6.3	1.9	1	1	1	2	2	2	0	FtsX-like	permease	family
Tmemb_40	PF10160.9	gi|298675252|ref|YP_003727002.1|	-	0.0067	15.9	1.1	0.0079	15.7	1.1	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein
AA_permease	PF00324.21	gi|298675253|ref|YP_003727003.1|	-	3.2e-42	144.8	37.2	4.1e-42	144.4	37.2	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.6	gi|298675253|ref|YP_003727003.1|	-	6.9e-22	77.9	42.5	8.3e-22	77.6	42.5	1.0	1	0	0	1	1	1	1	Amino	acid	permease
Herpes_LMP1	PF05297.11	gi|298675253|ref|YP_003727003.1|	-	2.2	7.4	11.8	0.79	8.9	1.2	2.8	3	0	0	3	3	3	0	Herpesvirus	latent	membrane	protein	1	(LMP1)
MtmB	PF05369.12	gi|298675254|ref|YP_003727004.1|	-	6.7e-225	747.0	0.7	7.5e-225	746.8	0.7	1.0	1	0	0	1	1	1	1	Monomethylamine	methyltransferase	MtmB
B12-binding_2	PF02607.17	gi|298675255|ref|YP_003727005.1|	-	4.7e-23	81.4	0.0	8.9e-23	80.5	0.0	1.5	1	0	0	1	1	1	1	B12	binding	domain
B12-binding	PF02310.19	gi|298675255|ref|YP_003727005.1|	-	2.2e-15	56.8	0.2	3.9e-15	55.9	0.2	1.4	1	0	0	1	1	1	1	B12	binding	domain
Abhydrolase_5	PF12695.7	gi|298675256|ref|YP_003727006.1|	-	0.00079	19.2	0.0	0.0026	17.6	0.0	1.8	2	0	0	2	2	2	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.8	gi|298675256|ref|YP_003727006.1|	-	0.0015	17.8	0.0	0.018	14.3	0.0	2.2	1	1	0	1	1	1	1	Serine	aminopeptidase,	S33
DLH	PF01738.18	gi|298675256|ref|YP_003727006.1|	-	0.0037	16.9	0.0	0.0061	16.1	0.0	1.2	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Chlorophyllase2	PF12740.7	gi|298675256|ref|YP_003727006.1|	-	0.0054	15.7	0.0	0.013	14.4	0.0	1.6	1	0	0	1	1	1	1	Chlorophyllase	enzyme
Abhydrolase_6	PF12697.7	gi|298675256|ref|YP_003727006.1|	-	0.052	14.1	0.0	0.078	13.6	0.0	1.3	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.21	gi|298675256|ref|YP_003727006.1|	-	0.087	12.3	0.0	3.7	7.0	0.0	2.3	1	1	1	2	2	2	0	Prolyl	oligopeptidase	family
Abhydrolase_2	PF02230.16	gi|298675256|ref|YP_003727006.1|	-	0.13	12.0	0.0	0.21	11.4	0.0	1.3	1	0	0	1	1	1	0	Phospholipase/Carboxylesterase
DUF2627	PF11118.8	gi|298675256|ref|YP_003727006.1|	-	1.4	9.5	0.0	1.4	9.5	0.0	3.3	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2627)
DUF2842	PF11003.8	gi|298675256|ref|YP_003727006.1|	-	3.2	8.1	18.5	0.84	9.9	4.1	3.0	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2842)
SNARE_assoc	PF09335.11	gi|298675257|ref|YP_003727007.1|	-	3.1e-22	79.3	8.0	3.1e-22	79.3	8.0	1.8	3	0	0	3	3	3	1	SNARE	associated	Golgi	protein
ECF_trnsprt	PF12822.7	gi|298675257|ref|YP_003727007.1|	-	6	6.9	28.0	0.044	13.9	9.0	2.8	3	0	0	3	3	3	0	ECF	transporter,	substrate-specific	component
Abhydrolase_1	PF00561.20	gi|298675258|ref|YP_003727008.1|	-	1.2e-33	116.9	0.0	1.5e-33	116.5	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
CBS	PF00571.28	gi|298675258|ref|YP_003727008.1|	-	1.5e-27	95.8	4.8	7.3e-16	58.4	0.6	2.8	2	0	0	2	2	2	2	CBS	domain
Hydrolase_4	PF12146.8	gi|298675258|ref|YP_003727008.1|	-	0.0039	16.5	0.0	0.0078	15.5	0.0	1.5	1	0	0	1	1	1	1	Serine	aminopeptidase,	S33
Esterase	PF00756.20	gi|298675258|ref|YP_003727008.1|	-	0.074	12.7	0.0	0.11	12.2	0.0	1.2	1	0	0	1	1	1	0	Putative	esterase
Cys_Met_Meta_PP	PF01053.20	gi|298675259|ref|YP_003727009.1|	-	4.2e-141	469.9	0.0	4.8e-141	469.7	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|298675259|ref|YP_003727009.1|	-	4.4e-11	42.7	0.0	6.7e-11	42.1	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.21	gi|298675259|ref|YP_003727009.1|	-	5e-07	29.2	0.0	7.3e-07	28.7	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|298675259|ref|YP_003727009.1|	-	1.6e-06	27.3	0.1	2.6e-06	26.7	0.1	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|298675259|ref|YP_003727009.1|	-	0.037	13.3	0.0	0.16	11.2	0.0	1.8	1	1	0	1	1	1	0	Beta-eliminating	lyase
Met_gamma_lyase	PF06838.11	gi|298675259|ref|YP_003727009.1|	-	0.043	12.4	0.8	0.27	9.7	0.8	2.0	1	1	0	1	1	1	0	Methionine	gamma-lyase
SepSecS	PF05889.13	gi|298675260|ref|YP_003727010.1|	-	3.5e-50	170.8	0.0	6.3e-50	170.0	0.0	1.4	1	1	0	1	1	1	1	O-phosphoseryl-tRNA(Sec)	selenium	transferase,	SepSecS
Aminotran_5	PF00266.19	gi|298675260|ref|YP_003727010.1|	-	1.5e-15	57.0	0.0	2.3e-15	56.5	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|298675260|ref|YP_003727010.1|	-	5.4e-10	39.0	0.0	6.1e-10	38.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
OKR_DC_1	PF01276.20	gi|298675260|ref|YP_003727010.1|	-	0.00075	18.3	0.0	0.0019	17.0	0.0	1.5	1	1	0	1	1	1	1	Orn/Lys/Arg	decarboxylase,	major	domain
HSL_N	PF06350.12	gi|298675260|ref|YP_003727010.1|	-	0.093	11.7	0.0	0.64	8.9	0.0	2.2	3	0	0	3	3	3	0	Hormone-sensitive	lipase	(HSL)	N-terminus
DegT_DnrJ_EryC1	PF01041.17	gi|298675260|ref|YP_003727010.1|	-	0.18	11.0	0.0	0.46	9.7	0.0	1.6	2	0	0	2	2	2	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
RNA_pol_L_2	PF13656.6	gi|298675261|ref|YP_003727011.1|	-	1.5e-20	72.7	0.2	1.9e-20	72.4	0.2	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.24	gi|298675261|ref|YP_003727011.1|	-	2.4e-07	30.1	0.1	4.4e-07	29.2	0.0	1.5	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
ECR1_N	PF14382.6	gi|298675262|ref|YP_003727012.1|	-	2.1e-13	49.8	0.9	3.2e-13	49.2	0.9	1.3	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
HypA	PF01155.19	gi|298675262|ref|YP_003727012.1|	-	0.00059	19.8	0.0	0.00076	19.5	0.0	1.3	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
EXOSC1	PF10447.9	gi|298675262|ref|YP_003727012.1|	-	0.00069	20.2	0.3	0.0017	18.9	0.3	1.7	1	1	0	1	1	1	1	Exosome	component	EXOSC1/CSL4
DZR	PF12773.7	gi|298675262|ref|YP_003727012.1|	-	0.011	15.7	1.5	0.018	15.0	1.5	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|298675262|ref|YP_003727012.1|	-	0.028	14.1	5.3	0.066	13.0	5.3	1.7	1	0	0	1	1	1	0	zinc-ribbon	domain
Zn_Tnp_IS91	PF14319.6	gi|298675262|ref|YP_003727012.1|	-	0.033	14.2	0.2	0.051	13.6	0.2	1.3	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
IBR	PF01485.21	gi|298675262|ref|YP_003727012.1|	-	0.039	14.2	1.6	0.065	13.5	1.6	1.3	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
DUF3006	PF11213.8	gi|298675262|ref|YP_003727012.1|	-	0.047	13.9	0.1	0.09	13.0	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3006)
Prok-RING_1	PF14446.6	gi|298675262|ref|YP_003727012.1|	-	0.051	13.5	0.6	0.051	13.5	0.6	1.6	2	0	0	2	2	1	0	Prokaryotic	RING	finger	family	1
zinc-ribbons_6	PF07191.12	gi|298675262|ref|YP_003727012.1|	-	0.06	13.3	2.7	0.09	12.8	2.7	1.2	1	0	0	1	1	1	0	zinc-ribbons
OrfB_Zn_ribbon	PF07282.11	gi|298675262|ref|YP_003727012.1|	-	0.06	13.3	2.6	0.12	12.3	2.6	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
NOB1_Zn_bind	PF08772.11	gi|298675262|ref|YP_003727012.1|	-	0.078	13.1	3.0	0.09	12.9	1.9	1.6	2	0	0	2	2	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Zn-ribbon_8	PF09723.10	gi|298675262|ref|YP_003727012.1|	-	0.24	11.5	3.5	0.66	10.1	3.6	1.7	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-LITAF-like	PF10601.9	gi|298675262|ref|YP_003727012.1|	-	0.64	10.3	2.5	4.9	7.5	0.1	2.3	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
zinc_ribbon_4	PF13717.6	gi|298675262|ref|YP_003727012.1|	-	1.1	9.3	6.5	14	5.7	4.9	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-C3HC4	PF00097.25	gi|298675262|ref|YP_003727012.1|	-	1.1	9.2	5.0	1.8	8.5	5.0	1.3	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
TF_Zn_Ribbon	PF08271.12	gi|298675262|ref|YP_003727012.1|	-	1.3	8.6	5.4	1.6	8.3	0.9	2.6	1	1	1	2	2	2	0	TFIIB	zinc-binding
MTS	PF05175.14	gi|298675263|ref|YP_003727013.1|	-	3.1e-14	52.9	0.0	4.5e-14	52.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|298675263|ref|YP_003727013.1|	-	1.6e-13	50.7	0.3	2.1e-13	50.3	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.6	gi|298675263|ref|YP_003727013.1|	-	3.5e-09	37.2	0.0	9.9e-09	35.8	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
UPF0020	PF01170.18	gi|298675263|ref|YP_003727013.1|	-	2.4e-07	30.7	0.4	1.2e-06	28.4	0.4	1.9	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_31	PF13847.6	gi|298675263|ref|YP_003727013.1|	-	3.1e-07	30.3	0.2	6.1e-07	29.3	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298675263|ref|YP_003727013.1|	-	6e-06	26.8	0.1	1.8e-05	25.3	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|298675263|ref|YP_003727013.1|	-	0.0051	16.5	0.0	0.007	16.0	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_23	PF13489.6	gi|298675263|ref|YP_003727013.1|	-	0.0073	16.2	0.0	0.008	16.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
N6_Mtase	PF02384.16	gi|298675263|ref|YP_003727013.1|	-	0.019	14.2	0.0	0.079	12.2	0.0	1.8	1	1	0	1	1	1	0	N-6	DNA	Methylase
AviRa	PF11599.8	gi|298675263|ref|YP_003727013.1|	-	0.04	13.4	0.1	0.099	12.1	0.1	1.6	1	1	1	2	2	2	0	RRNA	methyltransferase	AviRa
Methyltransf_15	PF09445.10	gi|298675263|ref|YP_003727013.1|	-	0.041	13.5	0.1	0.055	13.0	0.1	1.3	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_12	PF08242.12	gi|298675263|ref|YP_003727013.1|	-	0.053	14.3	0.0	0.098	13.4	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
FmrO	PF07091.11	gi|298675263|ref|YP_003727013.1|	-	0.12	12.0	0.1	0.15	11.6	0.1	1.3	1	1	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
Methyltransf_32	PF13679.6	gi|298675263|ref|YP_003727013.1|	-	0.15	12.1	0.0	0.18	11.7	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|298675263|ref|YP_003727013.1|	-	0.15	12.0	0.2	0.24	11.3	0.2	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Diphthamide_syn	PF01866.17	gi|298675264|ref|YP_003727014.1|	-	2.1e-84	283.5	0.8	2.6e-84	283.2	0.8	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
DUF1104	PF06518.11	gi|298675264|ref|YP_003727014.1|	-	0.16	12.3	0.3	0.39	11.1	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1104)
Pribosyltran	PF00156.27	gi|298675265|ref|YP_003727015.1|	-	3.6e-18	65.6	0.9	4.9e-18	65.2	0.9	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|298675265|ref|YP_003727015.1|	-	0.00019	21.0	0.2	0.00028	20.4	0.2	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|298675265|ref|YP_003727015.1|	-	0.01	15.4	0.1	0.015	14.8	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase
PDZ_2	PF13180.6	gi|298675265|ref|YP_003727015.1|	-	0.033	14.5	0.2	0.088	13.1	0.2	1.7	1	0	0	1	1	1	0	PDZ	domain
STT3_PglB_C	PF18527.1	gi|298675265|ref|YP_003727015.1|	-	0.056	13.6	1.0	6.5	6.9	0.1	2.9	2	1	0	3	3	3	0	STT3/PglB	C-terminal	beta-barrel	domain
DUF1235	PF06822.12	gi|298675265|ref|YP_003727015.1|	-	0.48	9.7	5.8	0.096	12.0	1.3	1.8	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1235)
OrfB_IS605	PF01385.19	gi|298675266|ref|YP_003727016.1|	-	3.1e-22	79.1	0.0	6.3e-22	78.1	0.0	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675266|ref|YP_003727016.1|	-	2.4e-12	46.6	0.0	4.9e-12	45.6	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Glyco_hydro_97	PF10566.9	gi|298675266|ref|YP_003727016.1|	-	5.2e-05	22.7	0.2	9.8e-05	21.8	0.2	1.5	1	0	0	1	1	1	1	Glycoside	hydrolase	97
HEPN_Swt1	PF18731.1	gi|298675266|ref|YP_003727016.1|	-	0.05	14.0	1.1	0.14	12.5	1.1	1.7	1	0	0	1	1	1	0	Swt1-like	HEPN
Rubrerythrin	PF02915.17	gi|298675267|ref|YP_003727017.1|	-	1.7e-25	90.0	11.3	2.5e-24	86.2	11.3	2.0	1	1	0	1	1	1	1	Rubrerythrin
DZR	PF12773.7	gi|298675267|ref|YP_003727017.1|	-	0.0021	18.1	0.6	0.0033	17.4	0.6	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
RecR	PF02132.15	gi|298675267|ref|YP_003727017.1|	-	0.0034	16.9	0.8	0.0076	15.8	0.8	1.6	1	0	0	1	1	1	1	RecR	protein
PI3K_rbd	PF00794.18	gi|298675267|ref|YP_003727017.1|	-	0.0059	16.7	0.1	0.008	16.3	0.1	1.2	1	0	0	1	1	1	1	PI3-kinase	family,	ras-binding	domain
zinc_ribbon_2	PF13240.6	gi|298675267|ref|YP_003727017.1|	-	0.0077	15.9	2.6	0.014	15.1	2.6	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|298675267|ref|YP_003727017.1|	-	0.011	15.9	1.7	0.03	14.5	1.7	1.8	1	0	0	1	1	1	0	Zinc	ribbon	domain
zinc_ribbon_15	PF17032.5	gi|298675267|ref|YP_003727017.1|	-	0.017	15.8	0.6	0.027	15.2	0.6	1.4	1	0	0	1	1	1	0	zinc-ribbon	family
HypA	PF01155.19	gi|298675267|ref|YP_003727017.1|	-	0.028	14.4	1.5	0.066	13.2	1.4	1.7	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-C3HC4_3	PF13920.6	gi|298675267|ref|YP_003727017.1|	-	0.033	14.1	0.4	0.049	13.5	0.4	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Prok-RING_1	PF14446.6	gi|298675267|ref|YP_003727017.1|	-	0.039	13.9	1.8	0.073	13.0	1.8	1.4	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
DUF2492	PF10678.9	gi|298675267|ref|YP_003727017.1|	-	0.077	13.3	0.6	0.55	10.5	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2492)
A2L_zn_ribbon	PF08792.10	gi|298675267|ref|YP_003727017.1|	-	0.087	12.6	2.3	0.28	10.9	0.5	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-RING_5	PF14634.6	gi|298675267|ref|YP_003727017.1|	-	0.12	12.3	1.1	0.2	11.6	1.1	1.3	1	0	0	1	1	1	0	zinc-RING	finger	domain
SLATT_5	PF18160.1	gi|298675267|ref|YP_003727017.1|	-	0.18	11.1	1.6	0.24	10.7	1.5	1.5	1	1	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	5
TF_Zn_Ribbon	PF08271.12	gi|298675267|ref|YP_003727017.1|	-	0.24	11.0	5.4	1.4	8.5	0.7	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-RRN7	PF11781.8	gi|298675267|ref|YP_003727017.1|	-	0.52	10.1	3.7	6.6	6.5	0.1	2.3	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Rubredoxin	PF00301.20	gi|298675267|ref|YP_003727017.1|	-	0.7	10.0	6.0	0.64	10.1	0.6	2.4	1	1	1	2	2	2	0	Rubredoxin
Desulfoferrod_N	PF06397.12	gi|298675267|ref|YP_003727017.1|	-	2	8.1	8.1	0.18	11.4	2.6	1.9	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
zf-Di19	PF05605.12	gi|298675267|ref|YP_003727017.1|	-	3.9	7.8	5.3	19	5.6	0.2	2.4	1	1	1	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
MarC	PF01914.17	gi|298675269|ref|YP_003727019.1|	-	1.5e-58	197.5	19.2	1.7e-58	197.3	19.2	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
SH	PF01445.17	gi|298675269|ref|YP_003727019.1|	-	0.18	11.8	3.6	0.51	10.3	3.6	1.7	1	0	0	1	1	1	0	Viral	small	hydrophobic	protein
DUF4191	PF13829.6	gi|298675269|ref|YP_003727019.1|	-	1.7	7.9	10.9	0.46	9.8	1.8	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4191)
HMG-CoA_red	PF00368.18	gi|298675270|ref|YP_003727020.1|	-	5.2e-136	453.5	3.0	5.9e-136	453.3	3.0	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
CorA	PF01544.18	gi|298675271|ref|YP_003727021.1|	-	2.1e-78	263.6	7.0	2.7e-78	263.2	7.0	1.0	1	0	0	1	1	1	1	CorA-like	Mg2+	transporter	protein
RhoGAP	PF00620.27	gi|298675271|ref|YP_003727021.1|	-	0.068	13.0	0.1	1.3	8.8	0.0	2.7	3	0	0	3	3	3	0	RhoGAP	domain
Usp	PF00582.26	gi|298675272|ref|YP_003727022.1|	-	1.5e-34	119.6	0.0	2e-34	119.1	0.0	1.2	1	0	0	1	1	1	1	Universal	stress	protein	family
DXP_reductoisom	PF02670.16	gi|298675272|ref|YP_003727022.1|	-	0.002	18.9	0.1	0.0037	18.0	0.1	1.5	1	1	0	1	1	1	1	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
DUF3782	PF12644.7	gi|298675272|ref|YP_003727022.1|	-	0.015	15.4	1.1	0.33	11.1	0.1	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3782)
Usp	PF00582.26	gi|298675273|ref|YP_003727023.1|	-	5.2e-33	114.5	0.0	5.8e-33	114.4	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
GAD	PF02938.14	gi|298675273|ref|YP_003727023.1|	-	0.0024	18.1	0.6	4	7.7	0.0	3.3	1	1	2	3	3	3	2	GAD	domain
Exotox-A_bind	PF09101.10	gi|298675273|ref|YP_003727023.1|	-	0.034	13.5	0.1	0.034	13.5	0.1	1.1	1	0	0	1	1	1	0	Exotoxin	A	binding
SRP54	PF00448.22	gi|298675273|ref|YP_003727023.1|	-	0.061	12.9	0.1	0.33	10.5	0.1	1.8	1	1	1	2	2	2	0	SRP54-type	protein,	GTPase	domain
Glyco_hydro_97	PF10566.9	gi|298675273|ref|YP_003727023.1|	-	0.062	12.6	0.6	0.46	9.7	0.6	1.9	1	1	0	1	1	1	0	Glycoside	hydrolase	97
Aconitase	PF00330.20	gi|298675275|ref|YP_003727025.1|	-	1.1e-103	347.8	6.1	1.9e-101	340.4	6.1	2.5	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|298675275|ref|YP_003727025.1|	-	0.015	14.0	0.0	0.023	13.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF521)
TrmB	PF01978.19	gi|298675276|ref|YP_003727026.1|	-	0.0018	18.1	0.1	0.0037	17.1	0.0	1.5	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|298675276|ref|YP_003727026.1|	-	0.088	12.7	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	MarR	family
DnaJ	PF00226.31	gi|298675277|ref|YP_003727027.1|	-	5.4e-13	48.9	1.5	1.4e-12	47.5	1.3	1.8	1	1	0	1	1	1	1	DnaJ	domain
P-mevalo_kinase	PF04275.14	gi|298675277|ref|YP_003727027.1|	-	0.0074	16.2	0.7	0.011	15.6	0.6	1.3	1	1	0	1	1	1	1	Phosphomevalonate	kinase
Sin3_corepress	PF08295.12	gi|298675277|ref|YP_003727027.1|	-	0.051	13.6	0.5	0.078	13.1	0.2	1.6	2	1	0	2	2	2	0	Sin3	family	co-repressor
AhpC-TSA	PF00578.21	gi|298675278|ref|YP_003727028.1|	-	6.9e-34	116.4	0.0	9.2e-34	116.0	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|298675278|ref|YP_003727028.1|	-	7e-15	55.0	0.0	9e-15	54.7	0.0	1.2	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.9	gi|298675278|ref|YP_003727028.1|	-	2.1e-13	49.9	0.8	5.6e-13	48.5	0.4	1.9	2	0	0	2	2	2	1	C-terminal	domain	of	1-Cys	peroxiredoxin
P_C10	PF14974.6	gi|298675278|ref|YP_003727028.1|	-	0.0073	16.4	0.0	0.013	15.5	0.0	1.5	1	0	0	1	1	1	1	Protein	C10
PAP_fibrillin	PF04755.12	gi|298675278|ref|YP_003727028.1|	-	0.091	12.7	0.0	0.12	12.3	0.0	1.2	1	0	0	1	1	1	0	PAP_fibrillin
zf-C2H2_9	PF16293.5	gi|298675278|ref|YP_003727028.1|	-	0.098	12.5	0.5	1.3	8.9	0.0	2.4	2	1	0	2	2	2	0	C2H2	type	zinc-finger	(1	copy)
FKBP_C	PF00254.28	gi|298675279|ref|YP_003727029.1|	-	5.7e-20	71.4	0.2	8.1e-20	70.9	0.2	1.2	1	0	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
tRNA_anti-codon	PF01336.25	gi|298675280|ref|YP_003727030.1|	-	0.00012	22.0	0.1	0.00025	21.0	0.1	1.5	1	1	1	2	2	2	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti-like	PF12869.7	gi|298675280|ref|YP_003727030.1|	-	0.12	12.0	0.5	0.19	11.3	0.1	1.5	1	1	1	2	2	2	0	tRNA_anti-like
NTP_transferase	PF00483.23	gi|298675281|ref|YP_003727031.1|	-	1e-52	179.2	0.0	1.6e-52	178.6	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.24	gi|298675281|ref|YP_003727031.1|	-	2.9e-18	64.8	21.6	9.4e-07	28.3	0.7	4.6	2	2	2	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.7	gi|298675281|ref|YP_003727031.1|	-	1.1e-10	42.1	0.0	1.5e-10	41.7	0.0	1.4	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.6	gi|298675281|ref|YP_003727031.1|	-	6.2e-09	35.5	19.7	0.003	17.3	5.0	4.8	3	2	1	4	4	4	4	Hexapeptide	repeat	of	succinyl-transferase
DUF4934	PF16288.5	gi|298675281|ref|YP_003727031.1|	-	0.086	12.8	0.0	0.21	11.5	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4934)
Fucokinase	PF07959.12	gi|298675281|ref|YP_003727031.1|	-	0.11	11.4	2.4	0.71	8.8	0.5	2.2	1	1	1	2	2	2	0	L-fucokinase
DUF4954	PF16314.5	gi|298675281|ref|YP_003727031.1|	-	0.97	7.5	6.2	1.7	6.6	6.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4954)
LPG_synthase_TM	PF03706.13	gi|298675282|ref|YP_003727032.1|	-	1.8e-46	159.1	18.9	2.6e-46	158.5	18.9	1.2	1	0	0	1	1	1	1	Lysylphosphatidylglycerol	synthase	TM	region
Radical_SAM	PF04055.21	gi|298675283|ref|YP_003727033.1|	-	1.6e-17	64.4	0.0	4.8e-17	62.8	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
HHH_3	PF12836.7	gi|298675283|ref|YP_003727033.1|	-	0.0001	22.4	0.1	0.001	19.3	0.0	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|298675283|ref|YP_003727033.1|	-	0.05	13.5	0.1	0.36	10.8	0.0	2.5	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
C_LFY_FLO	PF17538.2	gi|298675283|ref|YP_003727033.1|	-	0.095	12.2	0.1	0.19	11.2	0.1	1.4	1	0	0	1	1	1	0	DNA	Binding	Domain	(C-terminal)	Leafy/Floricaula
ILVD_EDD	PF00920.21	gi|298675285|ref|YP_003727035.1|	-	4.7e-218	725.0	0.6	5.3e-218	724.8	0.6	1.0	1	0	0	1	1	1	1	Dehydratase	family
Fer4	PF00037.27	gi|298675286|ref|YP_003727036.1|	-	6.9e-12	44.6	33.8	0.0012	18.6	2.3	5.0	5	0	0	5	5	5	4	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298675286|ref|YP_003727036.1|	-	2.6e-11	43.9	24.4	0.0014	19.1	0.8	3.7	3	1	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675286|ref|YP_003727036.1|	-	1.9e-09	37.5	27.4	8.1e-05	22.7	11.2	3.1	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675286|ref|YP_003727036.1|	-	3.9e-09	37.3	22.5	0.0041	18.0	0.4	4.3	4	0	0	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|298675286|ref|YP_003727036.1|	-	2.1e-07	30.7	36.6	0.0019	18.2	1.3	4.3	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675286|ref|YP_003727036.1|	-	2.8e-07	30.5	26.6	0.0014	18.7	9.2	3.3	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675286|ref|YP_003727036.1|	-	1e-06	28.7	30.9	0.065	13.4	13.3	3.8	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675286|ref|YP_003727036.1|	-	2.5e-06	27.2	36.1	0.0075	16.3	2.3	4.5	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|298675286|ref|YP_003727036.1|	-	1.8e-05	24.9	32.5	0.0042	17.5	1.6	4.6	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_11	PF13247.6	gi|298675286|ref|YP_003727036.1|	-	2.2e-05	24.5	11.2	2.2e-05	24.5	11.2	2.2	2	1	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298675286|ref|YP_003727036.1|	-	0.00077	19.9	28.5	0.14	12.7	1.5	3.6	2	2	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298675286|ref|YP_003727036.1|	-	0.0025	18.5	21.1	0.15	12.9	2.1	3.5	2	2	1	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|298675286|ref|YP_003727036.1|	-	0.0031	18.4	42.6	1.1	10.3	4.6	4.3	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298675286|ref|YP_003727036.1|	-	0.07	13.6	28.0	0.93	10.0	7.9	3.7	2	2	2	4	4	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298675286|ref|YP_003727036.1|	-	4.3	7.6	26.5	1.5	9.0	1.5	3.3	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
AFOR_C	PF01314.18	gi|298675287|ref|YP_003727037.1|	-	2.2e-66	224.4	0.0	2.7e-66	224.1	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|298675287|ref|YP_003727037.1|	-	7.9e-65	218.4	0.0	1.3e-64	217.8	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
MtrH	PF02007.18	gi|298675288|ref|YP_003727038.1|	-	9.1e-123	409.1	0.5	1.1e-122	408.8	0.5	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase	MtrH	subunit
CdhD	PF03599.16	gi|298675288|ref|YP_003727038.1|	-	0.012	14.4	0.0	0.22	10.2	0.0	2.0	2	0	0	2	2	2	0	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
Pterin_bind	PF00809.22	gi|298675288|ref|YP_003727038.1|	-	0.041	13.5	0.1	0.076	12.7	0.1	1.3	1	1	0	1	1	1	0	Pterin	binding	enzyme
PrsW-protease	PF13367.6	gi|298675289|ref|YP_003727039.1|	-	3.3e-32	111.5	10.4	4.6e-32	111.0	10.4	1.3	1	0	0	1	1	1	1	PrsW	family	intramembrane	metalloprotease
MtrA	PF04208.14	gi|298675290|ref|YP_003727040.1|	-	4e-56	189.4	0.1	4.9e-56	189.1	0.1	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	A
PTA_PTB	PF01515.19	gi|298675291|ref|YP_003727041.1|	-	0.0002	20.8	0.2	0.095	12.0	0.0	2.3	2	1	1	3	3	3	2	Phosphate	acetyl/butaryl	transferase
DUF2972	PF11186.8	gi|298675291|ref|YP_003727041.1|	-	0.15	11.9	1.3	0.3	11.0	1.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2972)
OrfB_IS605	PF01385.19	gi|298675293|ref|YP_003727043.1|	-	3.9e-28	98.1	2.4	8.8e-28	96.9	2.4	1.6	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675293|ref|YP_003727043.1|	-	6e-24	83.8	0.4	1.2e-23	82.7	0.4	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298675293|ref|YP_003727043.1|	-	4.8e-21	74.0	2.1	9.3e-20	69.8	1.4	2.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
Phage_GP20	PF06810.11	gi|298675293|ref|YP_003727043.1|	-	0.015	15.1	4.7	0.37	10.6	2.1	2.4	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
zf-piccolo	PF05715.13	gi|298675293|ref|YP_003727043.1|	-	0.024	14.8	0.3	0.066	13.4	0.3	1.7	1	0	0	1	1	1	0	Piccolo	Zn-finger
LemA	PF04011.12	gi|298675293|ref|YP_003727043.1|	-	0.098	12.5	2.8	0.49	10.2	0.6	2.3	2	0	0	2	2	2	0	LemA	family
DASH_Spc34	PF08657.10	gi|298675293|ref|YP_003727043.1|	-	1.7	8.4	8.1	0.067	13.0	1.2	2.1	3	0	0	3	3	3	0	DASH	complex	subunit	Spc34
AAA	PF00004.29	gi|298675294|ref|YP_003727044.1|	-	2.3e-10	41.0	0.7	9.7e-10	39.0	0.0	2.4	2	1	1	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.15	gi|298675294|ref|YP_003727044.1|	-	6.9e-07	29.4	0.0	3.2e-06	27.2	0.0	2.2	2	0	0	2	2	2	1	Rad17	P-loop	domain
AAA_assoc_2	PF16193.5	gi|298675294|ref|YP_003727044.1|	-	7.7e-05	23.0	0.1	0.00023	21.4	0.1	1.8	1	0	0	1	1	1	1	AAA	C-terminal	domain
AAA_22	PF13401.6	gi|298675294|ref|YP_003727044.1|	-	0.00023	21.5	0.0	0.54	10.5	0.0	2.9	1	1	1	2	2	2	2	AAA	domain
AAA_6	PF12774.7	gi|298675294|ref|YP_003727044.1|	-	0.00028	19.9	0.1	0.017	14.1	0.0	2.3	2	0	0	2	2	2	1	Hydrolytic	ATP	binding	site	of	dynein	motor	region
RuvB_N	PF05496.12	gi|298675294|ref|YP_003727044.1|	-	0.00072	19.3	0.3	0.004	16.9	0.0	2.4	4	0	0	4	4	4	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_30	PF13604.6	gi|298675294|ref|YP_003727044.1|	-	0.0022	17.7	0.1	0.0041	16.9	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|298675294|ref|YP_003727044.1|	-	0.0028	18.0	0.0	0.024	15.0	0.0	2.4	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_14	PF13173.6	gi|298675294|ref|YP_003727044.1|	-	0.0045	17.0	0.3	0.04	14.0	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
Helitron_like_N	PF14214.6	gi|298675294|ref|YP_003727044.1|	-	0.0088	16.3	0.4	0.017	15.4	0.4	1.5	1	0	0	1	1	1	1	Helitron	helicase-like	domain	at	N-terminus
DUF815	PF05673.13	gi|298675294|ref|YP_003727044.1|	-	0.023	13.9	0.0	0.067	12.3	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
AAA_7	PF12775.7	gi|298675294|ref|YP_003727044.1|	-	0.025	14.1	0.0	0.065	12.7	0.0	1.9	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
DEAD	PF00270.29	gi|298675294|ref|YP_003727044.1|	-	0.03	14.1	0.0	2.6	7.8	0.0	2.7	1	1	1	2	2	2	0	DEAD/DEAH	box	helicase
NACHT	PF05729.12	gi|298675294|ref|YP_003727044.1|	-	0.038	13.9	0.1	0.47	10.3	0.0	2.4	1	1	0	2	2	2	0	NACHT	domain
IPT	PF01745.16	gi|298675294|ref|YP_003727044.1|	-	0.048	13.0	0.0	0.14	11.5	0.0	1.8	1	0	0	1	1	1	0	Isopentenyl	transferase
TPP_enzyme_M_2	PF16582.5	gi|298675294|ref|YP_003727044.1|	-	0.063	13.0	0.1	0.67	9.6	0.1	2.4	3	0	0	3	3	3	0	Middle	domain	of	thiamine	pyrophosphate
AAA_5	PF07728.14	gi|298675294|ref|YP_003727044.1|	-	0.074	13.0	0.1	0.39	10.7	0.0	2.2	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_25	PF13481.6	gi|298675294|ref|YP_003727044.1|	-	0.12	12.0	0.1	0.67	9.5	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
Hydin_ADK	PF17213.3	gi|298675294|ref|YP_003727044.1|	-	1.3	9.3	10.6	2.2	8.5	0.0	2.5	2	0	0	2	2	2	0	Hydin	Adenylate	kinase-like	domain
Striatin	PF08232.12	gi|298675294|ref|YP_003727044.1|	-	2.7	8.6	10.7	6.3	7.4	10.7	1.6	1	0	0	1	1	1	0	Striatin	family
Topo-VIb_trans	PF09239.11	gi|298675295|ref|YP_003727045.1|	-	1.1e-67	226.9	0.0	1.9e-67	226.0	0.0	1.4	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
Top6b_C	PF18000.1	gi|298675295|ref|YP_003727045.1|	-	8.4e-43	145.2	2.5	2.6e-42	143.6	1.0	2.3	2	0	0	2	2	2	1	Type	2	DNA	topoisomerase	6	subunit	B	C-terminal	domain
HATPase_c	PF02518.26	gi|298675295|ref|YP_003727045.1|	-	9e-11	42.3	0.0	4.8e-10	39.9	0.0	2.1	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.6	gi|298675295|ref|YP_003727045.1|	-	1e-07	31.9	0.0	2.3e-07	30.7	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.11	gi|298675295|ref|YP_003727045.1|	-	0.012	14.4	0.0	0.023	13.5	0.0	1.4	1	0	0	1	1	1	0	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Ribosomal_S13	PF00416.22	gi|298675295|ref|YP_003727045.1|	-	0.078	13.4	0.0	0.5	10.8	0.0	2.3	2	0	0	2	2	2	0	Ribosomal	protein	S13/S18
TP6A_N	PF04406.14	gi|298675296|ref|YP_003727046.1|	-	4.2e-13	49.1	0.1	8.9e-13	48.0	0.1	1.6	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
OrfB_IS605	PF01385.19	gi|298675297|ref|YP_003727047.1|	-	7.6e-26	90.7	0.6	2.4e-25	89.1	0.0	2.1	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675297|ref|YP_003727047.1|	-	2.9e-12	46.3	0.1	1.2e-11	44.4	0.0	2.1	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
RuvX	PF03652.15	gi|298675297|ref|YP_003727047.1|	-	0.011	16.2	0.0	0.022	15.1	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	resolvase
Bac_rhamnosid	PF05592.11	gi|298675297|ref|YP_003727047.1|	-	0.075	13.0	0.0	0.34	10.9	0.0	2.0	2	0	0	2	2	2	0	Bacterial	alpha-L-rhamnosidase	concanavalin-like	domain
DNA_gyraseB	PF00204.25	gi|298675298|ref|YP_003727048.1|	-	2.4e-62	209.5	0.1	4.5e-62	208.6	0.1	1.5	1	0	0	1	1	1	1	DNA	gyrase	B
DNA_gyraseB_C	PF00986.21	gi|298675298|ref|YP_003727048.1|	-	1.1e-31	108.8	0.2	2.1e-31	107.9	0.2	1.5	1	0	0	1	1	1	1	DNA	gyrase	B	subunit,	carboxyl	terminus
HATPase_c	PF02518.26	gi|298675298|ref|YP_003727048.1|	-	3.4e-21	75.9	0.0	1.1e-20	74.2	0.0	2.0	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Toprim	PF01751.22	gi|298675298|ref|YP_003727048.1|	-	3.1e-17	62.7	0.0	9.2e-17	61.2	0.0	1.9	1	0	0	1	1	1	1	Toprim	domain
HATPase_c_3	PF13589.6	gi|298675298|ref|YP_003727048.1|	-	0.0059	16.4	0.4	0.018	14.8	0.0	2.0	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
DNA_topoisoIV	PF00521.20	gi|298675299|ref|YP_003727049.1|	-	4.6e-160	533.2	1.5	6.7e-160	532.6	1.5	1.2	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
DNA_gyraseA_C	PF03989.13	gi|298675299|ref|YP_003727049.1|	-	1.1e-77	255.3	18.4	4.8e-14	51.6	0.8	6.9	7	0	0	7	7	7	6	DNA	gyrase	C-terminal	domain,	beta-propeller
SOR_SNZ	PF01680.17	gi|298675300|ref|YP_003727050.1|	-	7.8e-105	349.2	6.9	1.2e-104	348.6	6.9	1.3	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.14	gi|298675300|ref|YP_003727050.1|	-	1e-08	34.8	7.8	1.6e-07	30.9	0.4	2.4	2	1	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
NanE	PF04131.14	gi|298675300|ref|YP_003727050.1|	-	0.00036	19.8	2.6	0.013	14.7	0.1	2.6	2	1	0	2	2	2	2	Putative	N-acetylmannosamine-6-phosphate	epimerase
NMO	PF03060.15	gi|298675300|ref|YP_003727050.1|	-	0.00068	19.1	3.9	0.0038	16.7	0.1	2.2	2	0	0	2	2	2	1	Nitronate	monooxygenase
DUF561	PF04481.12	gi|298675300|ref|YP_003727050.1|	-	0.00073	18.8	0.2	0.022	13.9	0.0	2.4	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF561)
Dus	PF01207.17	gi|298675300|ref|YP_003727050.1|	-	0.0011	18.1	0.3	0.64	9.1	0.0	2.4	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
IGPS	PF00218.21	gi|298675300|ref|YP_003727050.1|	-	0.002	17.3	0.0	0.059	12.5	0.0	2.2	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
SNO	PF01174.19	gi|298675301|ref|YP_003727051.1|	-	4.7e-52	176.6	0.0	5.2e-52	176.4	0.0	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.14	gi|298675301|ref|YP_003727051.1|	-	6.2e-11	42.2	0.0	8.6e-11	41.8	0.0	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|298675301|ref|YP_003727051.1|	-	2.2e-07	30.8	0.2	9.7e-07	28.7	0.2	1.8	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_S51	PF03575.17	gi|298675301|ref|YP_003727051.1|	-	3.7e-05	23.5	0.1	5.1e-05	23.0	0.1	1.3	1	0	0	1	1	1	1	Peptidase	family	S51
DJ-1_PfpI	PF01965.24	gi|298675301|ref|YP_003727051.1|	-	0.0035	17.2	0.1	0.0051	16.6	0.1	1.3	1	0	0	1	1	1	1	DJ-1/PfpI	family
Peptidase_C26	PF07722.13	gi|298675301|ref|YP_003727051.1|	-	0.027	14.2	0.2	0.13	12.0	0.0	2.2	2	1	0	2	2	2	0	Peptidase	C26
Putative_PNPOx	PF01243.20	gi|298675302|ref|YP_003727052.1|	-	1.6e-18	66.7	0.0	1.9e-18	66.4	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyrid_ox_like	PF16242.5	gi|298675302|ref|YP_003727052.1|	-	0.00028	20.5	0.2	0.00033	20.3	0.2	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase	like
DUF447	PF04289.12	gi|298675302|ref|YP_003727052.1|	-	0.02	14.7	0.0	0.025	14.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF447)
Ribosomal_S6e	PF01092.19	gi|298675303|ref|YP_003727053.1|	-	7.2e-42	142.3	0.6	8.1e-42	142.2	0.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S6e
GTP_EFTU	PF00009.27	gi|298675304|ref|YP_003727054.1|	-	4e-33	114.6	1.1	3e-32	111.7	0.2	2.6	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.6	gi|298675304|ref|YP_003727054.1|	-	5.9e-30	103.0	6.4	2.4e-29	101.0	5.8	2.4	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.8	gi|298675304|ref|YP_003727054.1|	-	5.6e-23	81.1	4.1	2e-22	79.3	4.1	2.0	1	0	0	1	1	1	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.25	gi|298675304|ref|YP_003727054.1|	-	5e-09	36.4	0.1	5e-09	36.4	0.1	3.2	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|298675304|ref|YP_003727054.1|	-	4.5e-08	33.2	0.8	1.3e-07	31.7	0.1	2.2	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
ATP_bind_1	PF03029.17	gi|298675304|ref|YP_003727054.1|	-	0.0027	17.5	0.0	0.012	15.4	0.0	2.0	1	1	1	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
cobW	PF02492.19	gi|298675304|ref|YP_003727054.1|	-	0.017	14.7	0.5	2.7	7.5	0.0	2.7	2	1	1	3	3	3	0	CobW/HypB/UreG,	nucleotide-binding	domain
PduV-EutP	PF10662.9	gi|298675304|ref|YP_003727054.1|	-	0.047	13.4	0.5	0.47	10.2	0.0	2.8	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
NOG1	PF06858.14	gi|298675304|ref|YP_003727054.1|	-	0.053	13.3	0.0	0.15	11.9	0.0	1.8	1	0	0	1	1	1	0	Nucleolar	GTP-binding	protein	1	(NOG1)
Dynamin_N	PF00350.23	gi|298675304|ref|YP_003727054.1|	-	0.061	13.4	0.5	2.2	8.3	0.1	2.8	3	0	0	3	3	3	0	Dynamin	family
Phage_int_SAM_5	PF13102.6	gi|298675304|ref|YP_003727054.1|	-	0.081	13.3	0.1	0.21	12.0	0.1	1.6	1	0	0	1	1	1	0	Phage	integrase	SAM-like	domain
BPL_C	PF02237.17	gi|298675304|ref|YP_003727054.1|	-	0.11	12.4	0.4	0.42	10.6	0.4	2.0	1	0	0	1	1	1	0	Biotin	protein	ligase	C	terminal	domain
NDK	PF00334.19	gi|298675305|ref|YP_003727055.1|	-	2.1e-56	189.7	0.5	2.3e-56	189.5	0.5	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
GHL6	PF14871.6	gi|298675305|ref|YP_003727055.1|	-	0.029	14.5	0.1	0.05	13.7	0.1	1.3	1	0	0	1	1	1	0	Hypothetical	glycosyl	hydrolase	6
Ribosomal_L24e	PF01246.20	gi|298675306|ref|YP_003727056.1|	-	2.1e-21	75.9	0.7	2.2e-21	75.8	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
YHS	PF04945.13	gi|298675306|ref|YP_003727056.1|	-	3.5e-06	27.0	1.5	5e-06	26.5	1.5	1.2	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.14	gi|298675306|ref|YP_003727056.1|	-	2.3e-05	24.2	3.7	2.9e-05	23.9	3.7	1.1	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF3268	PF11672.8	gi|298675306|ref|YP_003727056.1|	-	0.015	15.6	0.5	0.016	15.5	0.5	1.2	1	0	0	1	1	1	0	zinc-finger-containing	domain
DUF2116	PF09889.9	gi|298675306|ref|YP_003727056.1|	-	0.018	15.0	0.3	0.17	11.9	0.1	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
zf-MYND	PF01753.18	gi|298675306|ref|YP_003727056.1|	-	0.026	14.6	2.0	0.037	14.1	2.0	1.2	1	0	0	1	1	1	0	MYND	finger
VATC	PF18716.1	gi|298675306|ref|YP_003727056.1|	-	0.03	14.2	6.3	0.06	13.2	6.3	1.5	1	1	0	1	1	1	0	Vms1-associating	treble	clef	domain
zf-FLZ	PF04570.14	gi|298675306|ref|YP_003727056.1|	-	0.088	12.3	3.3	0.15	11.5	3.3	1.3	1	1	0	1	1	1	0	zinc-finger	of	the	FCS-type,	C2-C2
Ribosomal_S28e	PF01200.18	gi|298675307|ref|YP_003727057.1|	-	1.5e-29	101.8	0.5	1.6e-29	101.7	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S28e
Ribosomal_L7Ae	PF01248.26	gi|298675308|ref|YP_003727058.1|	-	2.6e-28	97.6	0.2	3.1e-28	97.3	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
PELOTA_1	PF15608.6	gi|298675308|ref|YP_003727058.1|	-	0.0067	16.3	0.0	0.0099	15.7	0.0	1.2	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
DUF1269	PF06897.12	gi|298675308|ref|YP_003727058.1|	-	0.012	15.9	0.1	3	8.2	0.0	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1269)
Radical_SAM	PF04055.21	gi|298675310|ref|YP_003727060.1|	-	8.5e-21	75.0	0.0	4.2e-20	72.8	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
DZR	PF12773.7	gi|298675310|ref|YP_003727060.1|	-	0.0048	16.9	0.2	0.0048	16.9	0.2	2.9	2	1	0	2	2	2	1	Double	zinc	ribbon
Fer4_12	PF13353.6	gi|298675310|ref|YP_003727060.1|	-	0.023	14.9	0.1	0.023	14.9	0.1	1.9	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
Pkinase	PF00069.25	gi|298675310|ref|YP_003727060.1|	-	0.029	13.8	0.1	1.2	8.4	0.0	2.1	2	0	0	2	2	2	0	Protein	kinase	domain
zf-ribbon_3	PF13248.6	gi|298675310|ref|YP_003727060.1|	-	0.052	13.0	0.0	0.052	13.0	0.0	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
DUF2614	PF11023.8	gi|298675310|ref|YP_003727060.1|	-	0.065	13.3	0.1	0.23	11.6	0.1	1.9	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
zinc_ribbon_2	PF13240.6	gi|298675310|ref|YP_003727060.1|	-	0.13	12.1	0.2	0.13	12.1	0.2	4.0	4	0	0	4	4	4	0	zinc-ribbon	domain
zf-BED	PF02892.15	gi|298675310|ref|YP_003727060.1|	-	0.22	11.6	10.7	2.9	8.0	0.3	3.5	3	0	0	3	3	3	0	BED	zinc	finger
NOB1_Zn_bind	PF08772.11	gi|298675310|ref|YP_003727060.1|	-	3.3	7.9	9.0	1.3	9.2	0.4	3.2	3	0	0	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF1272	PF06906.11	gi|298675310|ref|YP_003727060.1|	-	4.6	7.4	12.0	2.2	8.5	0.1	3.8	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1272)
NEAT	PF05031.12	gi|298675311|ref|YP_003727061.1|	-	0.017	15.7	5.5	0.13	12.8	0.5	2.8	2	1	0	2	2	2	0	Iron	Transport-associated	domain
Pilin_N	PF07790.11	gi|298675312|ref|YP_003727062.1|	-	5.3e-18	65.7	1.4	5.3e-18	65.7	1.4	2.0	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
T2SSF	PF00482.23	gi|298675313|ref|YP_003727063.1|	-	9.6e-33	112.8	0.6	8.5e-18	64.5	0.0	3.0	3	0	0	3	3	3	2	Type	II	secretion	system	(T2SS),	protein	F
Renin_r	PF07850.14	gi|298675313|ref|YP_003727063.1|	-	0.38	11.4	5.5	0.58	10.8	1.5	2.7	2	0	0	2	2	2	0	Renin	receptor-like	protein
Pex24p	PF06398.11	gi|298675313|ref|YP_003727063.1|	-	0.48	9.4	13.6	0.71	8.8	2.8	2.3	2	0	0	2	2	2	0	Integral	peroxisomal	membrane	peroxin
T2SSE	PF00437.20	gi|298675314|ref|YP_003727064.1|	-	8e-43	146.4	0.0	1.3e-42	145.8	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|298675314|ref|YP_003727064.1|	-	0.11	12.3	0.0	0.29	10.9	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
PfkB	PF00294.24	gi|298675315|ref|YP_003727065.1|	-	4.7e-45	154.2	0.0	6.2e-45	153.8	0.0	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
DUF555	PF04475.12	gi|298675316|ref|YP_003727066.1|	-	8.3e-49	164.1	0.1	9.6e-49	163.9	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF555)
RuvX	PF03652.15	gi|298675316|ref|YP_003727066.1|	-	0.024	15.0	0.0	0.03	14.7	0.0	1.1	1	0	0	1	1	1	0	Holliday	junction	resolvase
DUF357	PF04010.13	gi|298675317|ref|YP_003727067.1|	-	2.8e-32	110.6	0.6	3.3e-32	110.4	0.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
TPR_1	PF00515.28	gi|298675317|ref|YP_003727067.1|	-	0.011	15.6	1.7	0.026	14.3	0.1	2.3	2	1	1	3	3	3	0	Tetratricopeptide	repeat
DUF87	PF01935.17	gi|298675318|ref|YP_003727068.1|	-	6e-39	134.5	0.1	1e-38	133.7	0.1	1.4	1	0	0	1	1	1	1	Helicase	HerA,	central	domain
HAS-barrel	PF09378.10	gi|298675318|ref|YP_003727068.1|	-	1.3e-06	28.5	0.1	3.3e-06	27.2	0.1	1.7	1	0	0	1	1	1	1	HAS	barrel	domain
DUF853	PF05872.12	gi|298675318|ref|YP_003727068.1|	-	7e-05	21.6	0.0	0.17	10.5	0.0	2.3	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA_10	PF12846.7	gi|298675318|ref|YP_003727068.1|	-	0.0039	16.2	0.0	0.11	11.4	0.0	2.5	2	1	0	2	2	2	1	AAA-like	domain
AAA_22	PF13401.6	gi|298675318|ref|YP_003727068.1|	-	0.026	14.8	0.1	17	5.7	0.0	3.0	3	0	0	3	3	3	0	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|298675318|ref|YP_003727068.1|	-	0.06	12.2	0.0	3	6.6	0.0	2.2	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Zot	PF05707.12	gi|298675318|ref|YP_003727068.1|	-	0.066	12.9	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
ATP11	PF06644.11	gi|298675318|ref|YP_003727068.1|	-	2.9	7.6	7.9	4.7	6.9	7.9	1.2	1	0	0	1	1	1	0	ATP11	protein
TP_methylase	PF00590.20	gi|298675319|ref|YP_003727069.1|	-	8.7e-16	58.5	0.0	1e-15	58.3	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF1248	PF06852.12	gi|298675319|ref|YP_003727069.1|	-	0.0033	16.9	0.0	0.0058	16.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1248)
Cpn60_TCP1	PF00118.24	gi|298675320|ref|YP_003727070.1|	-	7.1e-160	532.8	15.1	8.1e-160	532.7	15.1	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DUF2119	PF09892.9	gi|298675321|ref|YP_003727071.1|	-	6.8e-74	247.3	0.7	7.7e-74	247.2	0.7	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2119)
Peptidase_M14	PF00246.24	gi|298675321|ref|YP_003727071.1|	-	0.044	13.6	0.0	2.3	7.9	0.1	2.2	2	0	0	2	2	2	0	Zinc	carboxypeptidase
S4	PF01479.25	gi|298675322|ref|YP_003727072.1|	-	5.7e-11	41.9	0.2	1.1e-10	41.1	0.2	1.5	1	0	0	1	1	1	1	S4	domain
FtsJ	PF01728.19	gi|298675322|ref|YP_003727072.1|	-	1.1e-08	35.4	0.0	1.8e-08	34.7	0.0	1.4	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_31	PF13847.6	gi|298675322|ref|YP_003727072.1|	-	4.1e-08	33.1	0.1	6.2e-08	32.6	0.1	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Fibrillarin	PF01269.17	gi|298675322|ref|YP_003727072.1|	-	2.8e-05	23.3	0.1	4.5e-05	22.7	0.1	1.3	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_25	PF13649.6	gi|298675322|ref|YP_003727072.1|	-	6e-05	23.7	0.0	9.7e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298675322|ref|YP_003727072.1|	-	8.1e-05	23.2	0.0	0.00013	22.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298675322|ref|YP_003727072.1|	-	0.0014	18.5	0.0	0.0024	17.7	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|298675322|ref|YP_003727072.1|	-	0.0074	17.0	0.0	0.015	16.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Response_reg	PF00072.24	gi|298675322|ref|YP_003727072.1|	-	0.04	14.1	0.7	0.09	13.0	0.1	2.0	2	0	0	2	2	2	0	Response	regulator	receiver	domain
S4_2	PF13275.6	gi|298675322|ref|YP_003727072.1|	-	0.057	13.2	0.2	0.098	12.5	0.2	1.4	1	0	0	1	1	1	0	S4	domain
Methyltransf_24	PF13578.6	gi|298675322|ref|YP_003727072.1|	-	0.15	13.0	0.0	0.3	12.1	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Oxidored_FMN	PF00724.20	gi|298675323|ref|YP_003727073.1|	-	2.2e-73	247.5	0.1	2.5e-73	247.3	0.1	1.0	1	0	0	1	1	1	1	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Dus	PF01207.17	gi|298675323|ref|YP_003727073.1|	-	0.00033	19.9	0.1	0.0016	17.6	0.1	1.9	1	1	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
HMGL-like	PF00682.19	gi|298675323|ref|YP_003727073.1|	-	0.0042	16.7	0.1	0.037	13.6	0.0	2.2	1	1	1	2	2	2	1	HMGL-like
His_biosynth	PF00977.21	gi|298675323|ref|YP_003727073.1|	-	0.0055	16.2	0.1	0.012	15.0	0.1	1.6	1	1	0	1	1	1	1	Histidine	biosynthesis	protein
DUF561	PF04481.12	gi|298675323|ref|YP_003727073.1|	-	0.014	14.6	0.4	0.032	13.4	0.3	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
DUF4908	PF16252.5	gi|298675323|ref|YP_003727073.1|	-	0.087	12.4	0.0	0.14	11.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4908)
DUF111	PF01969.17	gi|298675325|ref|YP_003727075.1|	-	4.5e-17	62.2	0.0	5.4e-17	62.0	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF111
OrfB_IS605	PF01385.19	gi|298675326|ref|YP_003727076.1|	-	1e-26	93.5	0.1	2.5e-26	92.2	0.1	1.6	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675326|ref|YP_003727076.1|	-	4.1e-24	84.3	1.3	1e-23	83.0	1.3	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298675326|ref|YP_003727076.1|	-	3.9e-14	51.9	0.1	1.2e-13	50.3	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
zinc_ribbon_2	PF13240.6	gi|298675326|ref|YP_003727076.1|	-	0.0038	16.9	1.4	1.1	9.1	0.2	2.7	2	0	0	2	2	2	2	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298675326|ref|YP_003727076.1|	-	0.0093	15.9	1.4	0.022	14.7	1.4	1.6	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
DZR	PF12773.7	gi|298675326|ref|YP_003727076.1|	-	0.02	14.9	0.7	0.052	13.6	0.7	1.7	1	0	0	1	1	1	0	Double	zinc	ribbon
ASFV_p27	PF06556.11	gi|298675326|ref|YP_003727076.1|	-	0.024	14.8	1.0	5.2	7.2	0.1	2.9	1	1	1	3	3	3	0	IAP-like	protein	p27	C-terminus
MapZ_EC1	PF18041.1	gi|298675326|ref|YP_003727076.1|	-	0.037	14.3	1.4	0.51	10.6	0.2	2.6	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
TF_Zn_Ribbon	PF08271.12	gi|298675326|ref|YP_003727076.1|	-	0.048	13.2	2.9	0.35	10.4	2.6	2.4	1	1	1	2	2	2	0	TFIIB	zinc-binding
Remorin_C	PF03763.13	gi|298675326|ref|YP_003727076.1|	-	0.094	12.6	3.0	0.2	11.6	3.0	1.5	1	0	0	1	1	1	0	Remorin,	C-terminal	region
zf-ribbon_3	PF13248.6	gi|298675326|ref|YP_003727076.1|	-	0.12	11.8	6.2	3.5	7.1	0.3	3.4	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.11	gi|298675326|ref|YP_003727076.1|	-	0.18	11.5	1.0	6.3	6.6	0.1	2.4	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF2115	PF09888.9	gi|298675327|ref|YP_003727077.1|	-	3.5e-53	180.5	4.5	3.9e-53	180.3	4.5	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Erf4	PF10256.9	gi|298675327|ref|YP_003727077.1|	-	0.0011	19.1	1.5	0.0051	16.9	0.3	2.1	1	1	1	2	2	2	1	Golgin	subfamily	A	member	7/ERF4	family
Peptidase_M85	PF13678.6	gi|298675327|ref|YP_003727077.1|	-	0.068	12.8	1.8	0.099	12.2	0.3	1.7	1	1	1	2	2	2	0	NFkB-p65-degrading	zinc	protease
Cytochrom_C_asm	PF01578.20	gi|298675328|ref|YP_003727078.1|	-	1.1e-29	103.8	14.7	1.1e-29	103.8	14.7	2.0	2	0	0	2	2	2	1	Cytochrome	C	assembly	protein
PalH	PF08733.10	gi|298675328|ref|YP_003727078.1|	-	0.0039	16.2	4.9	0.012	14.7	4.9	1.7	1	1	0	1	1	1	1	PalH/RIM21
DUF2304	PF10066.9	gi|298675328|ref|YP_003727078.1|	-	0.13	12.4	0.5	0.13	12.4	0.5	3.7	2	1	2	4	4	4	0	Uncharacterized	conserved	protein	(DUF2304)
DUF973	PF06157.11	gi|298675328|ref|YP_003727078.1|	-	1.6	7.7	8.2	0.44	9.6	4.4	1.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF973)
PRCH	PF03967.13	gi|298675328|ref|YP_003727078.1|	-	2.5	8.4	5.4	7.4	6.8	0.4	2.3	2	0	0	2	2	2	0	Photosynthetic	reaction	centre,	H-chain	N-terminal	region
DUF1461	PF07314.11	gi|298675328|ref|YP_003727078.1|	-	4.5	7.1	12.5	1.8	8.4	1.6	3.5	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1461)
CcmB	PF03379.13	gi|298675329|ref|YP_003727079.1|	-	6.2e-37	127.2	12.4	6.9e-37	127.0	12.4	1.0	1	0	0	1	1	1	1	CcmB	protein
ABC2_membrane	PF01061.24	gi|298675329|ref|YP_003727079.1|	-	9.9e-14	51.2	18.3	9.9e-14	51.2	18.3	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|298675329|ref|YP_003727079.1|	-	0.0091	15.1	32.8	0.0081	15.3	28.8	2.2	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.27	gi|298675330|ref|YP_003727080.1|	-	1.1e-34	119.9	0.0	1.8e-34	119.2	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675330|ref|YP_003727080.1|	-	2.7e-10	40.5	1.1	9.5e-06	25.6	0.3	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_13	PF13166.6	gi|298675330|ref|YP_003727080.1|	-	4.8e-06	25.5	1.0	7.2e-05	21.7	0.1	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.6	gi|298675330|ref|YP_003727080.1|	-	3.8e-05	24.3	3.4	6.5e-05	23.5	3.4	1.5	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|298675330|ref|YP_003727080.1|	-	4.1e-05	24.0	0.1	0.00016	22.1	0.1	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
SMC_N	PF02463.19	gi|298675330|ref|YP_003727080.1|	-	4.8e-05	22.9	1.7	0.011	15.1	1.7	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|298675330|ref|YP_003727080.1|	-	0.00014	21.5	0.1	0.00025	20.7	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_24	PF13479.6	gi|298675330|ref|YP_003727080.1|	-	0.00047	19.9	1.1	0.0014	18.4	1.1	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|298675330|ref|YP_003727080.1|	-	0.001	19.3	1.0	0.028	14.7	0.9	2.3	1	1	1	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|298675330|ref|YP_003727080.1|	-	0.0011	19.4	0.0	0.0017	18.8	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_27	PF13514.6	gi|298675330|ref|YP_003727080.1|	-	0.0056	16.3	0.0	0.17	11.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|298675330|ref|YP_003727080.1|	-	0.0071	16.1	0.0	0.016	14.9	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|298675330|ref|YP_003727080.1|	-	0.0094	15.9	0.3	0.045	13.7	0.2	1.9	1	1	1	2	2	2	1	RsgA	GTPase
NACHT	PF05729.12	gi|298675330|ref|YP_003727080.1|	-	0.013	15.5	0.0	0.021	14.7	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
IstB_IS21	PF01695.17	gi|298675330|ref|YP_003727080.1|	-	0.024	14.4	0.5	4.2	7.1	0.1	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
cobW	PF02492.19	gi|298675330|ref|YP_003727080.1|	-	0.028	14.0	0.0	0.072	12.7	0.0	1.7	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
SRPRB	PF09439.10	gi|298675330|ref|YP_003727080.1|	-	0.028	13.8	0.0	0.053	13.0	0.0	1.5	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
AAA_14	PF13173.6	gi|298675330|ref|YP_003727080.1|	-	0.033	14.2	0.1	0.6	10.2	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|298675330|ref|YP_003727080.1|	-	0.034	13.6	0.6	0.055	13.0	0.1	1.5	2	0	0	2	2	1	0	P-loop	containing	dynein	motor	region
AAA_18	PF13238.6	gi|298675330|ref|YP_003727080.1|	-	0.035	14.7	0.4	0.11	13.0	0.4	2.1	1	1	0	1	1	1	0	AAA	domain
KAP_NTPase	PF07693.14	gi|298675330|ref|YP_003727080.1|	-	0.043	13.1	0.2	0.065	12.5	0.2	1.6	1	1	0	1	1	1	0	KAP	family	P-loop	domain
RNA_helicase	PF00910.22	gi|298675330|ref|YP_003727080.1|	-	0.06	13.8	0.1	0.31	11.4	0.0	2.2	2	1	0	2	2	2	0	RNA	helicase
Mg_chelatase	PF01078.21	gi|298675330|ref|YP_003727080.1|	-	0.062	12.7	0.0	0.13	11.6	0.0	1.5	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
TsaE	PF02367.17	gi|298675330|ref|YP_003727080.1|	-	0.07	13.1	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
DEAD	PF00270.29	gi|298675330|ref|YP_003727080.1|	-	0.076	12.8	0.0	0.12	12.1	0.0	1.3	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_28	PF13521.6	gi|298675330|ref|YP_003727080.1|	-	0.083	13.1	0.2	0.22	11.8	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.23	gi|298675330|ref|YP_003727080.1|	-	0.09	12.9	0.1	0.62	10.2	0.0	2.2	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
ATPase_2	PF01637.18	gi|298675330|ref|YP_003727080.1|	-	0.11	12.4	3.0	0.48	10.3	3.0	2.1	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
NB-ARC	PF00931.22	gi|298675330|ref|YP_003727080.1|	-	0.19	10.9	1.5	0.56	9.3	0.0	2.1	2	0	0	2	2	2	0	NB-ARC	domain
AAA_25	PF13481.6	gi|298675330|ref|YP_003727080.1|	-	0.2	11.2	0.1	0.39	10.3	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
OrfB_IS605	PF01385.19	gi|298675331|ref|YP_003727081.1|	-	5.4e-25	87.9	0.8	1.5e-24	86.6	0.0	2.0	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675331|ref|YP_003727081.1|	-	3.2e-12	46.2	0.3	9.4e-12	44.7	0.1	2.0	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
RuvX	PF03652.15	gi|298675331|ref|YP_003727081.1|	-	0.018	15.4	0.0	0.037	14.4	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	resolvase
Y1_Tnp	PF01797.16	gi|298675332|ref|YP_003727082.1|	-	3.1e-27	95.1	1.7	3.7e-27	94.8	1.7	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
DUF4768	PF15989.5	gi|298675332|ref|YP_003727082.1|	-	0.019	14.9	0.2	0.026	14.5	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4768)
Molydop_binding	PF01568.21	gi|298675333|ref|YP_003727083.1|	-	2.5e-12	46.8	0.0	3.9e-12	46.2	0.0	1.3	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
CDC48_N	PF02359.18	gi|298675333|ref|YP_003727083.1|	-	0.00045	20.3	0.0	0.00068	19.8	0.0	1.2	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
SAM_1	PF00536.30	gi|298675333|ref|YP_003727083.1|	-	0.004	17.6	0.1	0.009	16.4	0.1	1.5	1	0	0	1	1	1	1	SAM	domain	(Sterile	alpha	motif)
TPP_enzyme_M	PF00205.22	gi|298675334|ref|YP_003727084.1|	-	4e-05	23.4	0.2	0.083	12.6	0.0	2.7	2	1	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	central	domain
Diphthamide_syn	PF01866.17	gi|298675334|ref|YP_003727084.1|	-	0.041	13.3	0.0	5.4	6.4	0.0	2.9	2	1	1	3	3	3	0	Putative	diphthamide	synthesis	protein
FeS	PF04060.13	gi|298675335|ref|YP_003727085.1|	-	9.2e-15	54.0	2.2	9.2e-15	54.0	2.2	3.0	3	1	0	3	3	3	1	Putative	Fe-S	cluster
Fer4	PF00037.27	gi|298675335|ref|YP_003727085.1|	-	4.7e-11	42.0	21.9	2.6e-08	33.4	5.1	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298675335|ref|YP_003727085.1|	-	1.4e-09	38.0	6.9	1.4e-09	38.0	6.9	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675335|ref|YP_003727085.1|	-	1.9e-08	34.7	40.9	4.7e-06	27.1	13.1	3.0	1	1	3	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298675335|ref|YP_003727085.1|	-	1.2e-06	28.4	12.5	5.4e-06	26.2	3.7	3.5	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298675335|ref|YP_003727085.1|	-	2.9e-06	27.4	9.5	2.9e-06	27.4	9.5	3.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675335|ref|YP_003727085.1|	-	9.2e-06	25.5	18.3	2.1e-05	24.4	2.6	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675335|ref|YP_003727085.1|	-	1.4e-05	25.1	15.0	9.1e-05	22.5	2.0	3.1	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298675335|ref|YP_003727085.1|	-	3.3e-05	24.2	12.1	0.00057	20.3	6.3	2.4	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298675335|ref|YP_003727085.1|	-	0.00015	22.5	23.1	0.016	16.1	8.0	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298675335|ref|YP_003727085.1|	-	0.00029	21.3	11.7	0.0013	19.2	5.6	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675335|ref|YP_003727085.1|	-	0.00052	20.9	11.6	0.011	16.6	3.4	3.2	2	1	1	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|298675335|ref|YP_003727085.1|	-	0.0016	18.8	3.4	0.0016	18.8	3.4	3.6	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|298675335|ref|YP_003727085.1|	-	0.0016	19.1	6.8	0.047	14.4	6.8	2.6	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|298675335|ref|YP_003727085.1|	-	0.0028	18.2	9.1	0.0028	18.2	9.1	3.2	3	1	0	3	3	3	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
YhfH	PF14149.6	gi|298675335|ref|YP_003727085.1|	-	0.0047	16.9	1.4	0.0047	16.9	1.4	2.6	2	0	0	2	2	2	1	YhfH-like	protein
Fer4_22	PF17179.4	gi|298675335|ref|YP_003727085.1|	-	0.049	14.5	2.1	0.049	14.5	2.1	2.9	2	1	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298675335|ref|YP_003727085.1|	-	1.8	8.8	14.0	1.5	9.0	3.5	2.6	3	1	0	3	3	3	0	4Fe-4S	dicluster	domain
FeThRed_B	PF02943.15	gi|298675336|ref|YP_003727086.1|	-	5.8e-27	93.8	1.1	6.9e-27	93.5	1.1	1.1	1	0	0	1	1	1	1	Ferredoxin	thioredoxin	reductase	catalytic	beta	chain
Usp	PF00582.26	gi|298675337|ref|YP_003727087.1|	-	5.1e-35	121.1	0.1	5.7e-35	120.9	0.1	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Dodecin	PF07311.12	gi|298675337|ref|YP_003727087.1|	-	0.0047	17.2	0.8	0.011	15.9	0.1	1.9	2	0	0	2	2	2	1	Dodecin
AA_permease_2	PF13520.6	gi|298675338|ref|YP_003727088.1|	-	1.3e-60	205.5	44.6	1.6e-60	205.2	44.6	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.21	gi|298675338|ref|YP_003727088.1|	-	6.6e-11	41.5	36.1	9.7e-11	40.9	36.1	1.2	1	0	0	1	1	1	1	Amino	acid	permease
Dimeth_Pyl	PF09505.10	gi|298675339|ref|YP_003727089.1|	-	3.1e-266	883.2	4.9	3.5e-266	883.0	4.9	1.0	1	0	0	1	1	1	1	Dimethylamine	methyltransferase	(Dimeth_PyL)
Antimicrobial_7	PF08102.11	gi|298675339|ref|YP_003727089.1|	-	0.045	14.0	0.0	0.093	13.0	0.0	1.5	1	0	0	1	1	1	0	Scorpion	antimicrobial	peptide
B12-binding	PF02310.19	gi|298675340|ref|YP_003727090.1|	-	8.4e-26	90.4	0.8	1.5e-25	89.5	0.8	1.4	1	0	0	1	1	1	1	B12	binding	domain
B12-binding_2	PF02607.17	gi|298675340|ref|YP_003727090.1|	-	1.8e-20	73.1	0.4	4.4e-20	71.9	0.4	1.7	1	0	0	1	1	1	1	B12	binding	domain
FlpD	PF02662.16	gi|298675341|ref|YP_003727091.1|	-	1e-59	199.9	3.7	1.1e-53	180.4	0.3	4.4	4	0	0	4	4	4	2	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Pyr_redox_2	PF07992.14	gi|298675341|ref|YP_003727091.1|	-	8.1e-23	81.1	0.3	2.9e-22	79.3	0.3	1.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4	PF00037.27	gi|298675341|ref|YP_003727091.1|	-	2.1e-15	55.8	53.6	1.6e-06	27.7	4.4	6.2	6	1	0	6	6	5	3	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|298675341|ref|YP_003727091.1|	-	1.4e-14	54.7	21.7	0.0017	19.3	4.8	5.9	5	1	0	5	5	5	3	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|298675341|ref|YP_003727091.1|	-	4.8e-13	49.5	39.6	5.4e-06	26.9	12.3	6.0	4	1	2	6	6	6	5	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675341|ref|YP_003727091.1|	-	1.2e-12	47.7	35.8	2e-05	24.6	0.5	5.3	4	1	1	5	5	5	4	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298675341|ref|YP_003727091.1|	-	3.3e-12	46.4	46.7	8.4e-06	25.8	10.8	6.8	6	1	1	7	7	7	4	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298675341|ref|YP_003727091.1|	-	1.3e-10	40.8	51.8	4.7e-05	23.3	2.3	6.0	6	0	0	6	6	5	4	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|298675341|ref|YP_003727091.1|	-	7.5e-10	38.3	53.3	1.2e-05	25.1	2.0	6.2	7	0	0	7	7	6	4	4Fe-4S	binding	domain
Pyr_redox	PF00070.27	gi|298675341|ref|YP_003727091.1|	-	3.6e-08	33.9	0.9	2e-05	25.0	0.2	3.1	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|298675341|ref|YP_003727091.1|	-	5.2e-08	32.5	0.6	2.1e-06	27.2	0.0	2.9	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|298675341|ref|YP_003727091.1|	-	9.3e-08	32.0	0.2	0.0008	19.1	0.4	2.9	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
Fer4_9	PF13187.6	gi|298675341|ref|YP_003727091.1|	-	1.1e-07	31.9	40.8	8.3e-07	29.1	10.7	4.9	4	1	2	6	6	6	3	4Fe-4S	dicluster	domain
FAD_binding_2	PF00890.24	gi|298675341|ref|YP_003727091.1|	-	1.9e-07	30.5	0.8	6.5e-07	28.8	0.6	1.8	2	0	0	2	2	2	1	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|298675341|ref|YP_003727091.1|	-	2.6e-07	30.4	0.3	6.7e-07	29.0	0.2	1.7	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Fer4_8	PF13183.6	gi|298675341|ref|YP_003727091.1|	-	1.3e-06	28.7	30.5	0.031	14.7	0.0	5.2	4	1	1	5	5	4	3	4Fe-4S	dicluster	domain
GIDA	PF01134.22	gi|298675341|ref|YP_003727091.1|	-	2.4e-06	26.9	0.8	9.2e-06	25.0	0.1	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|298675341|ref|YP_003727091.1|	-	1.2e-05	25.4	0.0	3e-05	24.1	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|298675341|ref|YP_003727091.1|	-	2.3e-05	23.3	0.8	6.2e-05	21.9	0.7	1.8	1	1	1	2	2	2	1	HI0933-like	protein
Fer4_4	PF12800.7	gi|298675341|ref|YP_003727091.1|	-	5.5e-05	23.4	33.7	0.097	13.2	1.4	5.1	4	0	0	4	4	4	3	4Fe-4S	binding	domain
AlaDh_PNT_C	PF01262.21	gi|298675341|ref|YP_003727091.1|	-	0.00077	18.8	0.0	0.0016	17.8	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_3	PF01494.19	gi|298675341|ref|YP_003727091.1|	-	0.002	17.4	0.2	0.0037	16.6	0.2	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Fer4_22	PF17179.4	gi|298675341|ref|YP_003727091.1|	-	0.0024	18.7	31.9	0.064	14.1	0.8	5.2	4	1	1	5	5	4	3	4Fe-4S	dicluster	domain
Thi4	PF01946.17	gi|298675341|ref|YP_003727091.1|	-	0.005	16.1	0.9	0.0086	15.3	0.1	1.7	2	0	0	2	2	2	1	Thi4	family
K_oxygenase	PF13434.6	gi|298675341|ref|YP_003727091.1|	-	0.0078	15.4	0.5	5.5	6.0	0.0	3.2	3	0	0	3	3	3	0	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_7	PF13241.6	gi|298675341|ref|YP_003727091.1|	-	0.019	15.4	0.6	0.12	12.8	0.1	2.6	3	1	0	3	3	1	0	Putative	NAD(P)-binding
Lycopene_cycl	PF05834.12	gi|298675341|ref|YP_003727091.1|	-	0.02	14.0	0.5	0.23	10.5	0.4	2.4	3	0	0	3	3	3	0	Lycopene	cyclase	protein
NAD_binding_9	PF13454.6	gi|298675341|ref|YP_003727091.1|	-	0.052	13.5	0.1	15	5.5	0.1	3.0	3	0	0	3	3	2	0	FAD-NAD(P)-binding
Fer4_13	PF13370.6	gi|298675341|ref|YP_003727091.1|	-	0.058	13.9	30.7	0.14	12.7	1.0	4.6	4	0	0	4	4	4	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Glyco_tran_WecB	PF03808.13	gi|298675341|ref|YP_003727091.1|	-	0.066	13.2	0.1	0.33	10.9	0.0	2.2	2	1	0	2	2	2	0	Glycosyl	transferase	WecB/TagA/CpsF	family
Amino_oxidase	PF01593.24	gi|298675341|ref|YP_003727091.1|	-	0.12	11.6	0.1	0.92	8.7	0.0	2.4	3	0	0	3	3	3	0	Flavin	containing	amine	oxidoreductase
Trp_halogenase	PF04820.14	gi|298675341|ref|YP_003727091.1|	-	0.16	10.8	0.5	1.3	7.8	0.3	2.0	2	0	0	2	2	2	0	Tryptophan	halogenase
MinC_N	PF05209.13	gi|298675341|ref|YP_003727091.1|	-	0.16	11.9	0.1	0.36	10.8	0.1	1.5	1	0	0	1	1	1	0	Septum	formation	inhibitor	MinC,	N-terminal	domain
Fer4_17	PF13534.6	gi|298675341|ref|YP_003727091.1|	-	0.32	11.6	43.1	0.55	10.8	2.8	5.3	3	2	3	6	6	6	0	4Fe-4S	dicluster	domain
3HCDH_N	PF02737.18	gi|298675341|ref|YP_003727091.1|	-	0.48	10.3	3.7	0.38	10.6	0.6	2.2	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Fer4_15	PF13459.6	gi|298675341|ref|YP_003727091.1|	-	1.4	9.7	27.2	2	9.2	4.5	4.6	3	1	1	4	4	4	0	4Fe-4S	single	cluster	domain
Fer4	PF00037.27	gi|298675342|ref|YP_003727092.1|	-	1.2e-44	148.3	71.1	1.4e-08	34.2	3.4	8.3	8	0	0	8	8	8	8	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298675342|ref|YP_003727092.1|	-	3.8e-32	110.6	60.6	9.3e-12	45.4	8.5	5.2	4	2	0	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675342|ref|YP_003727092.1|	-	4.4e-27	94.0	56.1	2e-07	31.1	10.1	5.7	3	2	5	8	8	8	8	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298675342|ref|YP_003727092.1|	-	1.8e-25	87.9	76.1	1e-06	28.5	1.6	8.4	8	0	0	8	8	8	8	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675342|ref|YP_003727092.1|	-	9.7e-25	86.5	55.9	5.4e-05	23.2	8.6	6.7	6	2	0	6	6	6	6	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675342|ref|YP_003727092.1|	-	1.2e-24	86.2	69.0	5.8e-08	32.7	9.8	7.0	4	3	4	8	8	8	8	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675342|ref|YP_003727092.1|	-	1.9e-22	80.0	64.6	0.00037	21.4	0.8	8.1	7	1	1	8	8	8	7	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|298675342|ref|YP_003727092.1|	-	1.2e-20	72.2	69.4	7.9e-05	22.5	2.5	8.3	8	0	0	8	8	8	6	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298675342|ref|YP_003727092.1|	-	6e-18	65.1	59.0	1.1e-06	29.0	5.6	6.3	3	1	4	7	7	7	6	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298675342|ref|YP_003727092.1|	-	1.9e-10	40.4	75.0	0.00067	20.0	3.6	8.3	8	0	0	8	8	8	7	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|298675342|ref|YP_003727092.1|	-	2.5e-10	40.5	88.6	0.0094	16.8	5.1	8.3	8	0	0	8	8	8	6	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298675342|ref|YP_003727092.1|	-	5.4e-09	36.5	70.7	0.011	16.2	11.0	7.7	2	2	6	8	8	8	6	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298675342|ref|YP_003727092.1|	-	1.1e-08	35.7	52.4	0.061	14.1	0.8	8.4	8	1	0	8	8	8	6	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|298675342|ref|YP_003727092.1|	-	9.5e-07	29.3	69.6	0.3	11.6	3.4	8.6	7	1	1	8	8	8	6	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|298675342|ref|YP_003727092.1|	-	0.021	15.0	0.4	0.021	15.0	0.4	7.3	3	2	4	7	7	7	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298675342|ref|YP_003727092.1|	-	0.021	15.6	0.5	0.021	15.6	0.5	8.4	8	1	2	10	10	10	0	4Fe-4S	dicluster	domain
Pox_A22	PF04848.13	gi|298675342|ref|YP_003727092.1|	-	0.048	13.8	0.1	0.079	13.1	0.1	1.3	1	0	0	1	1	1	0	Poxvirus	A22	protein
HicB_lk_antitox	PF15919.5	gi|298675342|ref|YP_003727092.1|	-	0.17	12.0	0.4	0.62	10.2	0.3	1.9	2	0	0	2	2	2	0	HicB_like	antitoxin	of	bacterial	toxin-antitoxin	system
GatB_N	PF02934.15	gi|298675343|ref|YP_003727093.1|	-	9.7e-72	241.6	0.1	5.9e-71	239.0	0.1	1.9	2	0	0	2	2	2	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|298675343|ref|YP_003727093.1|	-	1.2e-22	80.4	1.2	1e-21	77.4	0.3	2.5	2	0	0	2	2	2	1	GatB	domain
GAD	PF02938.14	gi|298675343|ref|YP_003727093.1|	-	5.8e-17	61.7	0.0	3.2e-16	59.3	0.0	2.2	2	0	0	2	2	2	1	GAD	domain
YqeY	PF09424.10	gi|298675343|ref|YP_003727093.1|	-	9.5e-06	25.7	1.2	1.6e-05	25.0	0.2	2.0	2	0	0	2	2	2	1	Yqey-like	protein
CPSase_sm_chain	PF00988.22	gi|298675344|ref|YP_003727094.1|	-	8.2e-47	158.2	0.1	1.4e-46	157.5	0.1	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.28	gi|298675344|ref|YP_003727094.1|	-	1.1e-40	139.4	0.0	1.7e-40	138.9	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|298675344|ref|YP_003727094.1|	-	4.6e-07	29.8	0.5	5.9e-05	22.9	0.5	2.3	1	1	0	1	1	1	1	Peptidase	C26
CPSase_L_D2	PF02786.17	gi|298675345|ref|YP_003727095.1|	-	2.6e-108	360.4	0.2	3.6e-70	235.8	0.0	2.3	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.19	gi|298675345|ref|YP_003727095.1|	-	5.6e-38	130.0	0.3	1.4e-37	128.7	0.3	1.8	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
MGS	PF02142.22	gi|298675345|ref|YP_003727095.1|	-	7.6e-23	80.5	0.7	9e-21	73.9	0.1	4.2	4	0	0	4	4	4	1	MGS-like	domain
Dala_Dala_lig_C	PF07478.13	gi|298675345|ref|YP_003727095.1|	-	2e-17	63.4	0.1	7.4e-08	32.2	0.0	2.4	2	0	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.22	gi|298675345|ref|YP_003727095.1|	-	6e-17	61.7	0.1	2.8e-08	33.5	0.0	2.4	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|298675345|ref|YP_003727095.1|	-	2.3e-16	59.7	0.0	5.5e-08	32.6	0.0	2.8	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.14	gi|298675345|ref|YP_003727095.1|	-	6.2e-15	55.6	1.8	8.4e-08	32.4	0.0	3.1	4	0	0	4	4	4	2	ATP-grasp	domain
GARS_A	PF01071.19	gi|298675345|ref|YP_003727095.1|	-	6.7e-09	35.8	0.1	0.00054	19.8	0.0	2.6	2	0	0	2	2	2	2	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_5	PF13549.6	gi|298675345|ref|YP_003727095.1|	-	0.0017	17.9	0.0	0.052	13.0	0.0	2.7	3	0	0	3	3	3	1	ATP-grasp	domain
Epimerase	PF01370.21	gi|298675345|ref|YP_003727095.1|	-	0.1	12.0	0.0	0.34	10.3	0.0	1.8	2	0	0	2	2	2	0	NAD	dependent	epimerase/dehydratase	family
Arginosuc_synth	PF00764.19	gi|298675346|ref|YP_003727096.1|	-	1.7e-175	583.9	0.1	2e-175	583.7	0.1	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
NAD_synthase	PF02540.17	gi|298675346|ref|YP_003727096.1|	-	0.00027	20.1	0.0	0.0006	19.0	0.0	1.5	1	0	0	1	1	1	1	NAD	synthase
QueC	PF06508.13	gi|298675346|ref|YP_003727096.1|	-	0.00029	20.4	0.0	0.0012	18.4	0.0	1.9	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|298675346|ref|YP_003727096.1|	-	0.0053	15.6	0.0	0.0089	14.9	0.0	1.3	1	0	0	1	1	1	1	tRNA	methyl	transferase
DUF2061	PF09834.9	gi|298675347|ref|YP_003727097.1|	-	0.04	14.4	4.0	0.04	14.4	4.0	2.7	3	0	0	3	3	3	0	Predicted	membrane	protein	(DUF2061)
CTP_transf_1	PF01148.20	gi|298675347|ref|YP_003727097.1|	-	0.079	12.7	18.2	0.11	12.2	5.3	2.2	1	1	1	2	2	2	0	Cytidylyltransferase	family
E1-E2_ATPase	PF00122.20	gi|298675348|ref|YP_003727098.1|	-	8.9e-54	181.8	1.6	8.9e-54	181.8	1.6	3.6	4	0	0	4	4	4	2	E1-E2	ATPase
Cation_ATPase_C	PF00689.21	gi|298675348|ref|YP_003727098.1|	-	1.8e-37	128.8	9.5	1.8e-37	128.8	9.5	2.6	3	0	0	3	3	3	1	Cation	transporting	ATPase,	C-terminus
Hydrolase	PF00702.26	gi|298675348|ref|YP_003727098.1|	-	1.8e-23	83.9	2.1	1.9e-22	80.6	2.1	2.4	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase_N	PF00690.26	gi|298675348|ref|YP_003727098.1|	-	2.3e-20	72.1	0.1	8.4e-19	67.0	0.0	2.7	2	0	0	2	2	2	1	Cation	transporter/ATPase,	N-terminus
Cation_ATPase	PF13246.6	gi|298675348|ref|YP_003727098.1|	-	1.6e-10	40.9	0.0	4.2e-10	39.6	0.0	1.8	1	0	0	1	1	1	1	Cation	transport	ATPase	(P-type)
Hydrolase_3	PF08282.12	gi|298675348|ref|YP_003727098.1|	-	8.5e-08	32.2	5.7	0.0038	17.0	0.6	3.2	3	0	0	3	3	3	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|298675348|ref|YP_003727098.1|	-	5e-05	23.8	0.0	9.7e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Fer2_3	PF13085.6	gi|298675349|ref|YP_003727099.1|	-	3.6e-30	104.2	0.2	1.3e-29	102.3	0.1	1.9	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.6	gi|298675349|ref|YP_003727099.1|	-	4.1e-08	33.6	1.0	4.1e-08	33.6	1.0	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675349|ref|YP_003727099.1|	-	1.6e-07	31.4	1.4	1.6e-07	31.4	1.4	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer2	PF00111.27	gi|298675349|ref|YP_003727099.1|	-	1.6e-05	24.7	1.2	0.00016	21.5	0.2	2.3	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_17	PF13534.6	gi|298675349|ref|YP_003727099.1|	-	9.7e-05	22.8	0.7	9.7e-05	22.8	0.7	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675349|ref|YP_003727099.1|	-	0.00019	22.0	1.9	0.00019	22.0	1.9	2.5	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675349|ref|YP_003727099.1|	-	0.0025	17.9	10.4	0.0036	17.4	5.4	2.9	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Peptidase_C74	PF12387.8	gi|298675349|ref|YP_003727099.1|	-	0.04	13.4	0.0	0.071	12.6	0.0	1.4	1	0	0	1	1	1	0	Pestivirus	NS2	peptidase
Fer4_4	PF12800.7	gi|298675349|ref|YP_003727099.1|	-	0.05	14.1	1.1	0.05	14.1	1.1	3.4	3	1	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|298675349|ref|YP_003727099.1|	-	0.072	14.0	0.7	0.072	14.0	0.7	3.2	3	1	1	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.6	gi|298675349|ref|YP_003727099.1|	-	0.089	13.0	6.0	0.33	11.1	0.1	2.6	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298675349|ref|YP_003727099.1|	-	1.5	9.6	6.0	7.1	7.4	0.2	3.1	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4	PF00037.27	gi|298675349|ref|YP_003727099.1|	-	3	7.8	18.9	0.22	11.4	3.6	3.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675349|ref|YP_003727099.1|	-	4.8	7.4	12.2	0.27	11.4	0.6	2.8	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
FAD_binding_2	PF00890.24	gi|298675350|ref|YP_003727100.1|	-	1e-114	383.9	0.0	1.3e-114	383.6	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.20	gi|298675350|ref|YP_003727100.1|	-	2.6e-41	140.6	0.8	4.3e-41	139.9	0.8	1.4	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.14	gi|298675350|ref|YP_003727100.1|	-	4e-09	36.1	2.0	0.00018	20.8	0.1	3.8	3	1	1	4	4	4	3	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|298675350|ref|YP_003727100.1|	-	2.5e-06	27.3	1.7	9.5e-06	25.4	1.6	1.9	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|298675350|ref|YP_003727100.1|	-	3.1e-06	26.1	0.3	0.00017	20.4	0.5	2.7	3	0	0	3	3	3	1	HI0933-like	protein
GIDA	PF01134.22	gi|298675350|ref|YP_003727100.1|	-	1.1e-05	24.8	4.5	5e-05	22.5	2.9	2.6	2	1	0	2	2	2	1	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.7	gi|298675350|ref|YP_003727100.1|	-	1.8e-05	24.3	0.7	4.9e-05	22.9	0.4	1.8	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.27	gi|298675350|ref|YP_003727100.1|	-	0.0012	19.3	1.3	0.017	15.7	0.1	2.8	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|298675350|ref|YP_003727100.1|	-	0.0015	17.9	0.3	0.0044	16.3	0.1	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|298675350|ref|YP_003727100.1|	-	0.0016	18.6	0.1	0.0057	16.8	0.1	2.0	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.19	gi|298675350|ref|YP_003727100.1|	-	0.0034	16.7	0.3	0.0053	16.0	0.3	1.3	1	0	0	1	1	1	1	FAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|298675350|ref|YP_003727100.1|	-	0.0053	16.1	0.1	0.0092	15.3	0.1	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
GARS_C	PF02843.16	gi|298675350|ref|YP_003727100.1|	-	0.019	15.3	0.4	1.5	9.2	0.0	3.1	3	0	0	3	3	3	0	Phosphoribosylglycinamide	synthetase,	C	domain
DUF374	PF04028.13	gi|298675350|ref|YP_003727100.1|	-	0.024	14.2	0.0	1.8	8.2	0.1	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF374)
Thi4	PF01946.17	gi|298675350|ref|YP_003727100.1|	-	0.029	13.6	1.5	0.089	12.0	0.2	2.4	3	0	0	3	3	3	0	Thi4	family
Lycopene_cycl	PF05834.12	gi|298675350|ref|YP_003727100.1|	-	0.088	11.8	0.3	0.14	11.2	0.3	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Lyase_1	PF00206.20	gi|298675351|ref|YP_003727101.1|	-	4.2e-99	331.9	0.0	5.3e-99	331.5	0.0	1.1	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.9	gi|298675351|ref|YP_003727101.1|	-	4.9e-20	71.7	0.7	4.9e-20	71.7	0.7	2.0	2	0	0	2	2	2	1	Fumarase	C	C-terminus
Cupin_2	PF07883.11	gi|298675352|ref|YP_003727102.1|	-	1.2e-06	28.2	0.0	1.6e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
MannoseP_isomer	PF01050.18	gi|298675352|ref|YP_003727102.1|	-	0.027	14.4	0.0	0.029	14.3	0.0	1.1	1	0	0	1	1	1	0	Mannose-6-phosphate	isomerase
OrfB_Zn_ribbon	PF07282.11	gi|298675353|ref|YP_003727103.1|	-	2.8e-23	81.6	0.1	1.3e-22	79.4	0.0	2.3	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675353|ref|YP_003727103.1|	-	0.0012	19.0	0.8	0.0027	17.9	0.8	1.5	1	0	0	1	1	1	1	Probable	transposase
Zn_ribbon_17	PF17120.5	gi|298675353|ref|YP_003727103.1|	-	0.027	14.1	0.2	0.054	13.1	0.2	1.5	1	0	0	1	1	1	0	Zinc-ribbon,	C4HC2	type
zf-RING_7	PF02591.15	gi|298675353|ref|YP_003727103.1|	-	0.071	13.3	0.1	0.2	11.9	0.1	1.7	1	0	0	1	1	1	0	C4-type	zinc	ribbon	domain
UPF0547	PF10571.9	gi|298675353|ref|YP_003727103.1|	-	0.15	12.2	1.6	0.33	11.1	1.6	1.6	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
PAS_3	PF08447.12	gi|298675354|ref|YP_003727104.1|	-	1.3e-39	134.3	2.0	3.8e-18	65.6	0.0	3.7	3	0	0	3	3	3	3	PAS	fold
HisKA_2	PF07568.12	gi|298675354|ref|YP_003727104.1|	-	2.9e-29	101.0	3.9	8.4e-29	99.5	3.9	1.9	1	0	0	1	1	1	1	Histidine	kinase
PAS_9	PF13426.7	gi|298675354|ref|YP_003727104.1|	-	8.8e-25	87.0	5.2	5.3e-12	45.9	0.0	5.3	6	0	0	6	6	6	4	PAS	domain
PAS	PF00989.25	gi|298675354|ref|YP_003727104.1|	-	7.2e-20	71.1	0.0	1.4e-10	41.2	0.0	5.0	5	0	0	5	5	5	3	PAS	fold
PAS_4	PF08448.10	gi|298675354|ref|YP_003727104.1|	-	3.6e-18	65.8	0.0	5.5e-09	36.3	0.0	4.5	5	0	0	5	5	5	3	PAS	fold
PAS_11	PF14598.6	gi|298675354|ref|YP_003727104.1|	-	2.8e-14	53.2	0.0	1.1e-06	28.8	0.1	2.8	2	0	0	2	2	2	2	PAS	domain
PAS_8	PF13188.7	gi|298675354|ref|YP_003727104.1|	-	9.6e-10	38.3	0.0	0.008	16.2	0.0	4.2	4	0	0	4	4	4	3	PAS	domain
HATPase_c	PF02518.26	gi|298675354|ref|YP_003727104.1|	-	1.3e-07	32.1	0.0	6.8e-07	29.8	0.0	2.2	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HWE_HK	PF07536.14	gi|298675354|ref|YP_003727104.1|	-	3.9e-06	27.5	0.2	8e-06	26.5	0.2	1.5	1	0	0	1	1	1	1	HWE	histidine	kinase
HATPase_c_3	PF13589.6	gi|298675354|ref|YP_003727104.1|	-	0.0091	15.8	0.0	0.024	14.4	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_2	PF13581.6	gi|298675354|ref|YP_003727104.1|	-	0.022	14.7	0.0	0.047	13.7	0.0	1.5	1	0	0	1	1	1	0	Histidine	kinase-like	ATPase	domain
DnaB	PF00772.21	gi|298675354|ref|YP_003727104.1|	-	0.03	14.4	0.7	0.58	10.3	0.1	2.8	2	0	0	2	2	2	0	DnaB-like	helicase	N	terminal	domain
MitMem_reg	PF13012.6	gi|298675354|ref|YP_003727104.1|	-	0.25	11.8	2.8	0.78	10.2	2.7	1.8	1	1	0	1	1	1	0	Maintenance	of	mitochondrial	structure	and	function
PAPS_reduct	PF01507.19	gi|298675355|ref|YP_003727105.1|	-	3.8e-52	176.8	0.0	5e-52	176.4	0.0	1.1	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
PTH2	PF01981.16	gi|298675356|ref|YP_003727106.1|	-	3.2e-07	30.6	0.0	3.8e-07	30.4	0.0	1.1	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Par3_HAL_N_term	PF12053.8	gi|298675356|ref|YP_003727106.1|	-	0.0031	17.7	0.0	0.0046	17.1	0.0	1.2	1	0	0	1	1	1	1	N-terminal	of	Par3	and	HAL	proteins
OrfB_IS605	PF01385.19	gi|298675357|ref|YP_003727107.1|	-	8.7e-23	80.8	0.5	2.9e-22	79.1	0.5	1.9	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675357|ref|YP_003727107.1|	-	1.9e-08	34.1	0.0	5.5e-08	32.6	0.0	1.9	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
PhaP_Bmeg	PF09602.10	gi|298675357|ref|YP_003727107.1|	-	0.017	15.0	2.9	0.037	14.0	2.9	1.5	1	0	0	1	1	1	0	Polyhydroxyalkanoic	acid	inclusion	protein	(PhaP_Bmeg)
CRF1	PF10380.9	gi|298675357|ref|YP_003727107.1|	-	0.022	15.1	0.1	0.049	14.0	0.1	1.5	1	0	0	1	1	1	0	Transcription	factor	CRF1
DUF986	PF06173.12	gi|298675357|ref|YP_003727107.1|	-	0.1	12.7	3.3	0.17	12.0	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF986)
Aconitase	PF00330.20	gi|298675358|ref|YP_003727108.1|	-	7.3e-178	592.3	0.0	1e-177	591.8	0.0	1.1	1	0	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.19	gi|298675358|ref|YP_003727108.1|	-	1.8e-44	151.2	0.2	7.2e-44	149.3	0.0	2.1	2	0	0	2	2	2	1	Aconitase	C-terminal	domain
LTD	PF00932.19	gi|298675359|ref|YP_003727109.1|	-	7.5e-20	71.4	4.2	9.5e-20	71.0	4.2	1.1	1	0	0	1	1	1	1	Lamin	Tail	Domain
Pilin_N	PF07790.11	gi|298675359|ref|YP_003727109.1|	-	0.0001	23.2	8.7	0.00013	22.8	4.0	2.8	1	1	1	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
DUF3341	PF11821.8	gi|298675359|ref|YP_003727109.1|	-	0.048	13.3	0.4	0.065	12.9	0.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3341)
Peptidase_M20	PF01546.28	gi|298675360|ref|YP_003727110.1|	-	5.4e-29	101.4	0.0	6.4e-29	101.1	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|298675360|ref|YP_003727110.1|	-	2.5e-07	30.6	0.0	6.7e-07	29.2	0.0	1.7	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.17	gi|298675360|ref|YP_003727110.1|	-	0.17	11.6	0.0	0.27	10.9	0.0	1.4	1	0	0	1	1	1	0	Peptidase	family	M28
Acetyltransf_1	PF00583.25	gi|298675361|ref|YP_003727111.1|	-	7.2e-13	48.8	0.1	8.6e-13	48.5	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|298675361|ref|YP_003727111.1|	-	5e-12	46.1	0.3	8.5e-12	45.3	0.3	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|298675361|ref|YP_003727111.1|	-	8.1e-12	45.2	0.1	9.5e-12	45.0	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|298675361|ref|YP_003727111.1|	-	4.7e-06	26.5	0.1	6.3e-06	26.1	0.1	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_4	PF13420.7	gi|298675361|ref|YP_003727111.1|	-	9e-06	25.9	0.5	1.1e-05	25.7	0.5	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|298675361|ref|YP_003727111.1|	-	1.9e-05	25.3	0.0	2.2e-05	25.1	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|298675361|ref|YP_003727111.1|	-	7.4e-05	22.8	0.0	0.00013	22.0	0.0	1.4	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_15	PF17013.5	gi|298675361|ref|YP_003727111.1|	-	0.00079	18.9	1.3	0.0011	18.5	1.3	1.5	1	1	0	1	1	1	1	Putative	acetyl-transferase
Thioredoxin_3	PF13192.6	gi|298675361|ref|YP_003727111.1|	-	0.025	14.6	0.1	0.051	13.6	0.1	1.6	1	1	0	1	1	1	0	Thioredoxin	domain
Acetyltransf_13	PF13880.6	gi|298675361|ref|YP_003727111.1|	-	0.03	14.3	0.0	0.055	13.5	0.0	1.4	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
PanZ	PF12568.8	gi|298675361|ref|YP_003727111.1|	-	0.064	13.0	0.0	0.073	12.8	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain,	PanZ
Glyco_hydro_15	PF00723.21	gi|298675362|ref|YP_003727112.1|	-	2.4e-10	39.8	4.6	1e-06	27.8	4.0	3.1	1	1	0	2	2	2	2	Glycosyl	hydrolases	family	15
DUF608	PF04685.13	gi|298675362|ref|YP_003727112.1|	-	0.00021	20.6	0.9	0.00021	20.6	0.9	1.7	2	0	0	2	2	2	1	Glycosyl-hydrolase	family	116,	catalytic	region
Bac_rhamnosid6H	PF17389.2	gi|298675362|ref|YP_003727112.1|	-	0.013	14.8	0.0	0.024	13.9	0.0	1.3	1	0	0	1	1	1	0	Bacterial	alpha-L-rhamnosidase	6	hairpin	glycosidase	domain
Acetyltransf_1	PF00583.25	gi|298675363|ref|YP_003727113.1|	-	3.3e-12	46.7	0.0	4.1e-12	46.4	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|298675363|ref|YP_003727113.1|	-	1.1e-11	44.9	0.0	1.7e-11	44.4	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|298675363|ref|YP_003727113.1|	-	1.4e-07	31.5	0.0	1.8e-07	31.1	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|298675363|ref|YP_003727113.1|	-	0.0036	17.4	0.0	0.056	13.5	0.0	2.1	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|298675363|ref|YP_003727113.1|	-	0.0096	16.1	0.1	0.036	14.2	0.1	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|298675363|ref|YP_003727113.1|	-	0.031	14.4	0.0	0.045	13.9	0.0	1.3	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Acetyltransf_3	PF13302.7	gi|298675363|ref|YP_003727113.1|	-	0.08	13.6	0.0	0.1	13.3	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_16	PF05301.11	gi|298675363|ref|YP_003727113.1|	-	0.21	11.3	0.0	0.53	10.0	0.0	1.6	1	1	1	2	2	2	0	GNAT	acetyltransferase,	Mec-17
Methyltransf_25	PF13649.6	gi|298675365|ref|YP_003727115.1|	-	5.8e-17	62.2	0.0	9.1e-17	61.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298675365|ref|YP_003727115.1|	-	3.5e-14	53.2	0.0	5.6e-14	52.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298675365|ref|YP_003727115.1|	-	1.9e-08	34.3	0.0	3.1e-08	33.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298675365|ref|YP_003727115.1|	-	3.3e-08	33.1	0.0	7.8e-08	31.9	0.0	1.6	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_31	PF13847.6	gi|298675365|ref|YP_003727115.1|	-	5.5e-08	32.8	0.0	8.2e-08	32.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.14	gi|298675365|ref|YP_003727115.1|	-	2.5e-07	30.3	0.3	8.3e-07	28.6	0.2	1.9	1	1	1	2	2	2	1	Tellurite	resistance	protein	TehB
Methyltransf_8	PF05148.15	gi|298675365|ref|YP_003727115.1|	-	2e-05	24.6	0.0	0.00052	19.9	0.0	2.2	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_12	PF08242.12	gi|298675365|ref|YP_003727115.1|	-	2e-05	25.3	0.0	4.5e-05	24.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|298675365|ref|YP_003727115.1|	-	0.0057	16.2	0.0	0.0063	16.1	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
DUF938	PF06080.12	gi|298675365|ref|YP_003727115.1|	-	0.038	13.8	0.0	0.047	13.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF938)
MTS	PF05175.14	gi|298675365|ref|YP_003727115.1|	-	0.085	12.4	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
MtmB	PF05369.12	gi|298675366|ref|YP_003727116.1|	-	2.6e-199	662.6	0.2	3e-199	662.5	0.2	1.0	1	0	0	1	1	1	1	Monomethylamine	methyltransferase	MtmB
Peripla_BP_2	PF01497.18	gi|298675367|ref|YP_003727117.1|	-	3.3e-24	85.8	0.1	6.4e-24	84.8	0.1	1.4	2	0	0	2	2	2	1	Periplasmic	binding	protein
AAA_13	PF13166.6	gi|298675367|ref|YP_003727117.1|	-	0.07	11.8	0.1	0.11	11.1	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
FecCD	PF01032.18	gi|298675368|ref|YP_003727118.1|	-	9.8e-91	304.0	29.5	1.2e-90	303.7	29.5	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC_tran	PF00005.27	gi|298675369|ref|YP_003727119.1|	-	2.7e-30	105.6	0.0	4.1e-30	105.1	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675369|ref|YP_003727119.1|	-	2.5e-09	37.4	2.4	0.00052	19.9	0.3	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|298675369|ref|YP_003727119.1|	-	1.7e-05	24.4	0.4	0.00018	21.0	0.4	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|298675369|ref|YP_003727119.1|	-	1.8e-05	25.3	0.2	3.4e-05	24.4	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|298675369|ref|YP_003727119.1|	-	4.9e-05	23.6	0.4	0.00057	20.2	0.4	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|298675369|ref|YP_003727119.1|	-	0.00027	21.0	0.1	0.014	15.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|298675369|ref|YP_003727119.1|	-	0.00051	20.5	0.0	0.00097	19.6	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|298675369|ref|YP_003727119.1|	-	0.0006	19.5	0.0	0.002	17.8	0.0	1.8	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Mg_chelatase	PF01078.21	gi|298675369|ref|YP_003727119.1|	-	0.00073	19.0	0.0	0.0016	17.9	0.0	1.5	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
NB-ARC	PF00931.22	gi|298675369|ref|YP_003727119.1|	-	0.00089	18.5	0.6	0.0093	15.2	0.6	2.0	1	1	0	1	1	1	1	NB-ARC	domain
RsgA_GTPase	PF03193.16	gi|298675369|ref|YP_003727119.1|	-	0.00097	19.1	0.0	0.0024	17.8	0.0	1.7	2	0	0	2	2	1	1	RsgA	GTPase
NTPase_1	PF03266.15	gi|298675369|ref|YP_003727119.1|	-	0.0015	18.5	0.8	0.83	9.5	0.1	2.8	2	1	0	2	2	2	1	NTPase
AAA_15	PF13175.6	gi|298675369|ref|YP_003727119.1|	-	0.0027	17.5	0.4	0.0062	16.3	0.1	1.7	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.29	gi|298675369|ref|YP_003727119.1|	-	0.0028	18.1	0.0	0.026	15.0	0.0	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.6	gi|298675369|ref|YP_003727119.1|	-	0.0033	16.2	0.0	1.1	7.8	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
T2SSE	PF00437.20	gi|298675369|ref|YP_003727119.1|	-	0.0076	15.3	0.0	0.018	14.1	0.0	1.6	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ABC_ATPase	PF09818.9	gi|298675369|ref|YP_003727119.1|	-	0.016	14.1	0.1	1.1	8.0	0.0	2.8	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_19	PF13245.6	gi|298675369|ref|YP_003727119.1|	-	0.019	15.3	0.7	0.22	11.8	0.7	2.1	1	1	0	1	1	1	0	AAA	domain
HSM3_N	PF18795.1	gi|298675369|ref|YP_003727119.1|	-	0.023	14.1	0.2	0.038	13.4	0.2	1.4	1	0	0	1	1	1	0	DNA	mismatch	repair	protein	HSM3,	N	terminal	domain
ATPase_2	PF01637.18	gi|298675369|ref|YP_003727119.1|	-	0.033	14.1	0.0	0.059	13.3	0.0	1.4	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_24	PF13479.6	gi|298675369|ref|YP_003727119.1|	-	0.054	13.2	0.0	0.094	12.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|298675369|ref|YP_003727119.1|	-	0.061	13.2	0.0	0.12	12.3	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
IF2_N	PF04760.15	gi|298675369|ref|YP_003727119.1|	-	0.089	12.6	0.1	0.76	9.6	0.0	2.5	3	0	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
AAA_30	PF13604.6	gi|298675369|ref|YP_003727119.1|	-	0.12	12.0	0.0	0.23	11.1	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
Fe_dep_repress	PF01325.19	gi|298675370|ref|YP_003727120.1|	-	1.2e-17	63.9	0.4	2.2e-17	63.0	0.4	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.15	gi|298675370|ref|YP_003727120.1|	-	2.5e-15	56.3	0.0	5.3e-15	55.3	0.0	1.5	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
LexA_DNA_bind	PF01726.16	gi|298675370|ref|YP_003727120.1|	-	0.00039	20.1	0.0	0.00068	19.4	0.0	1.4	1	0	0	1	1	1	1	LexA	DNA	binding	domain
HTH_Crp_2	PF13545.6	gi|298675370|ref|YP_003727120.1|	-	0.00067	19.6	0.0	0.0011	18.9	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_24	PF13412.6	gi|298675370|ref|YP_003727120.1|	-	0.00096	18.7	0.0	0.0015	18.1	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
FeoC	PF09012.10	gi|298675370|ref|YP_003727120.1|	-	0.002	18.2	0.0	0.0031	17.5	0.0	1.4	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
Rrf2	PF02082.20	gi|298675370|ref|YP_003727120.1|	-	0.0027	18.0	0.0	0.0042	17.4	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
MarR_2	PF12802.7	gi|298675370|ref|YP_003727120.1|	-	0.0034	17.2	0.0	0.0058	16.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_DeoR	PF08220.12	gi|298675370|ref|YP_003727120.1|	-	0.01	15.6	0.0	0.02	14.6	0.0	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|298675370|ref|YP_003727120.1|	-	0.013	15.3	0.0	0.019	14.8	0.0	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
TrmB	PF01978.19	gi|298675370|ref|YP_003727120.1|	-	0.013	15.4	0.1	0.02	14.8	0.1	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Mnd1	PF03962.15	gi|298675370|ref|YP_003727120.1|	-	0.038	14.3	0.1	1.7	9.0	0.0	2.9	2	1	1	3	3	3	0	Mnd1	HTH	domain
B-block_TFIIIC	PF04182.12	gi|298675370|ref|YP_003727120.1|	-	0.1	12.8	0.0	0.16	12.2	0.0	1.3	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_34	PF13601.6	gi|298675370|ref|YP_003727120.1|	-	0.15	12.2	0.1	0.81	9.9	0.0	2.2	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
MarR	PF01047.22	gi|298675370|ref|YP_003727120.1|	-	0.17	11.8	0.0	0.3	11.0	0.0	1.4	1	0	0	1	1	1	0	MarR	family
CCG	PF02754.16	gi|298675371|ref|YP_003727121.1|	-	6.1e-34	116.1	0.3	4.9e-19	68.3	0.2	2.4	2	0	0	2	2	2	2	Cysteine-rich	domain
DUF2024	PF09630.10	gi|298675371|ref|YP_003727121.1|	-	0.14	12.1	0.1	0.32	10.9	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2024)
Phage_int_SAM_2	PF12834.7	gi|298675371|ref|YP_003727121.1|	-	0.17	12.6	0.2	0.45	11.2	0.0	1.7	2	0	0	2	2	2	0	Phage	integrase,	N-terminal
Fer4_8	PF13183.6	gi|298675372|ref|YP_003727122.1|	-	6.5e-11	42.5	7.8	1.1e-10	41.8	7.4	1.6	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675372|ref|YP_003727122.1|	-	1.9e-09	37.5	7.4	3.5e-09	36.6	7.4	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298675372|ref|YP_003727122.1|	-	1.2e-08	35.4	9.6	2e-08	34.7	9.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675372|ref|YP_003727122.1|	-	2.6e-08	33.9	8.6	5.1e-08	33.0	8.6	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675372|ref|YP_003727122.1|	-	1.3e-07	32.0	10.3	3.9e-06	27.3	11.9	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675372|ref|YP_003727122.1|	-	8e-05	22.5	10.7	0.0088	16.1	1.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675372|ref|YP_003727122.1|	-	0.00019	21.5	6.4	0.00036	20.6	6.4	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298675372|ref|YP_003727122.1|	-	0.00029	20.5	13.7	0.019	14.8	3.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|298675372|ref|YP_003727122.1|	-	0.00052	19.8	3.5	0.26	11.1	0.2	2.2	1	1	1	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_16	PF13484.6	gi|298675372|ref|YP_003727122.1|	-	0.0054	17.6	12.0	0.019	15.9	11.2	2.2	2	1	0	2	2	1	1	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.6	gi|298675372|ref|YP_003727122.1|	-	0.012	15.7	7.9	0.084	13.1	1.0	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298675372|ref|YP_003727122.1|	-	0.022	15.3	4.1	2.2	8.9	0.3	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|298675372|ref|YP_003727122.1|	-	0.037	14.8	3.6	0.33	11.7	0.1	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.7	gi|298675372|ref|YP_003727122.1|	-	0.055	14.0	11.7	0.27	11.9	3.5	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|298675372|ref|YP_003727122.1|	-	0.15	13.1	3.2	0.15	13.1	3.2	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|298675372|ref|YP_003727122.1|	-	1.4	9.8	12.4	2.3	9.1	1.0	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298675372|ref|YP_003727122.1|	-	5.6	7.2	12.1	1.2	9.4	1.6	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
F420_oxidored	PF03807.17	gi|298675373|ref|YP_003727123.1|	-	7e-18	65.0	0.1	1.3e-17	64.2	0.1	1.4	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
PDH	PF02153.17	gi|298675373|ref|YP_003727123.1|	-	0.14	11.1	0.0	0.23	10.5	0.0	1.4	1	0	0	1	1	1	0	Prephenate	dehydrogenase
KR	PF08659.10	gi|298675373|ref|YP_003727123.1|	-	0.16	11.9	0.0	0.3	11.0	0.0	1.4	1	0	0	1	1	1	0	KR	domain
RRXRR	PF14239.6	gi|298675374|ref|YP_003727124.1|	-	1.4e-61	207.4	3.9	2.3e-61	206.6	3.9	1.4	1	0	0	1	1	1	1	RRXRR	protein
HNH	PF01844.23	gi|298675374|ref|YP_003727124.1|	-	1.8e-11	44.0	8.8	4.3e-11	42.8	8.8	1.7	1	0	0	1	1	1	1	HNH	endonuclease
HNH_5	PF14279.6	gi|298675374|ref|YP_003727124.1|	-	1.9e-07	30.8	5.7	5e-07	29.5	5.7	1.7	1	0	0	1	1	1	1	HNH	endonuclease
HNH_2	PF13391.6	gi|298675374|ref|YP_003727124.1|	-	8.6e-05	22.6	0.4	0.0004	20.5	0.4	2.1	1	1	0	1	1	1	1	HNH	endonuclease
PHD	PF00628.29	gi|298675374|ref|YP_003727124.1|	-	0.032	14.1	0.9	4.7	7.2	0.1	2.7	2	0	0	2	2	2	0	PHD-finger
zf_UBZ	PF18439.1	gi|298675374|ref|YP_003727124.1|	-	6.6	6.4	7.6	3.6	7.3	3.4	2.3	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
GXGXG	PF01493.19	gi|298675375|ref|YP_003727125.1|	-	4.1e-38	130.9	10.3	5.2e-38	130.6	10.3	1.1	1	0	0	1	1	1	1	GXGXG	motif
Glu_synthase	PF01645.17	gi|298675376|ref|YP_003727126.1|	-	6.6e-139	463.1	0.0	9.7e-139	462.6	0.0	1.2	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
Glu_syn_central	PF04898.14	gi|298675376|ref|YP_003727126.1|	-	7.6e-15	55.1	0.0	2.3e-07	30.6	0.0	2.3	2	0	0	2	2	2	2	Glutamate	synthase	central	domain
Fer4	PF00037.27	gi|298675376|ref|YP_003727126.1|	-	9e-08	31.6	22.1	1.1e-05	25.0	4.2	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
IMPDH	PF00478.25	gi|298675376|ref|YP_003727126.1|	-	1.3e-07	31.0	6.1	8.5e-05	21.7	4.7	2.7	2	1	1	3	3	3	2	IMP	dehydrogenase	/	GMP	reductase	domain
FMN_dh	PF01070.18	gi|298675376|ref|YP_003727126.1|	-	2e-07	30.4	1.4	2e-07	30.4	1.4	2.9	4	0	0	4	4	4	1	FMN-dependent	dehydrogenase
Fer4_7	PF12838.7	gi|298675376|ref|YP_003727126.1|	-	6.5e-07	29.9	16.1	3.6e-06	27.4	11.5	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675376|ref|YP_003727126.1|	-	3.1e-06	28.0	11.1	0.00039	21.3	0.8	3.3	3	0	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|298675376|ref|YP_003727126.1|	-	4.5e-06	26.5	14.3	9.2e-05	22.4	1.6	3.1	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298675376|ref|YP_003727126.1|	-	2.9e-05	24.1	15.4	9.1e-05	22.5	10.6	2.7	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298675376|ref|YP_003727126.1|	-	3.1e-05	24.0	9.1	3.1e-05	24.0	9.1	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
NMO	PF03060.15	gi|298675376|ref|YP_003727126.1|	-	5.4e-05	22.7	3.0	0.00012	21.6	3.0	1.5	1	0	0	1	1	1	1	Nitronate	monooxygenase
Fer4_8	PF13183.6	gi|298675376|ref|YP_003727126.1|	-	0.00018	21.9	8.5	0.19	12.2	0.2	3.6	4	0	0	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675376|ref|YP_003727126.1|	-	0.00074	19.6	19.7	0.0058	16.7	2.7	3.2	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675376|ref|YP_003727126.1|	-	0.01	15.9	23.3	0.01	15.9	2.1	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Dus	PF01207.17	gi|298675376|ref|YP_003727126.1|	-	0.085	11.9	0.1	0.15	11.1	0.1	1.4	1	0	0	1	1	1	0	Dihydrouridine	synthase	(Dus)
His_biosynth	PF00977.21	gi|298675376|ref|YP_003727126.1|	-	0.097	12.1	1.0	0.11	11.9	0.1	1.5	2	0	0	2	2	2	0	Histidine	biosynthesis	protein
Fer4_17	PF13534.6	gi|298675376|ref|YP_003727126.1|	-	0.21	12.1	18.5	3.6	8.2	3.9	3.5	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298675376|ref|YP_003727126.1|	-	5.5	7.2	13.0	0.055	13.7	4.9	1.8	2	0	0	2	2	1	0	4Fe-4S	dicluster	domain
GATase_2	PF00310.21	gi|298675377|ref|YP_003727127.1|	-	1.6e-13	50.2	0.0	3.9e-11	42.3	0.0	2.1	1	1	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.6	gi|298675377|ref|YP_003727127.1|	-	1e-07	32.2	0.0	1.6e-06	28.3	0.0	2.5	2	1	1	3	3	3	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|298675377|ref|YP_003727127.1|	-	1.9e-05	24.6	0.0	0.061	13.2	0.0	2.4	2	0	0	2	2	2	2	Glutamine	amidotransferase	domain
UbiA	PF01040.18	gi|298675379|ref|YP_003727129.1|	-	0.059	12.7	0.0	0.063	12.6	0.0	1.0	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
UPF0228	PF05727.11	gi|298675381|ref|YP_003727131.1|	-	1.2e-26	92.9	9.8	1.5e-26	92.6	9.3	1.3	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0228)
DUF1980	PF09323.10	gi|298675381|ref|YP_003727131.1|	-	0.041	13.8	0.7	0.069	13.1	0.2	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1980)
DUF3221	PF11518.8	gi|298675381|ref|YP_003727131.1|	-	0.23	11.8	3.0	0.52	10.7	0.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3221)
DUF92	PF01940.16	gi|298675382|ref|YP_003727132.1|	-	0.1	12.0	0.0	0.16	11.4	0.0	1.2	1	0	0	1	1	1	0	Integral	membrane	protein	DUF92
ABC_tran	PF00005.27	gi|298675383|ref|YP_003727133.1|	-	4.1e-25	88.9	0.0	1e-24	87.6	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675383|ref|YP_003727133.1|	-	1.1e-12	48.4	0.1	1.1e-08	35.3	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|298675383|ref|YP_003727133.1|	-	2.2e-05	24.4	0.0	0.13	12.0	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
DUF4162	PF13732.6	gi|298675383|ref|YP_003727133.1|	-	0.00027	21.6	0.1	0.00086	20.0	0.0	1.9	2	0	0	2	2	1	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.6	gi|298675383|ref|YP_003727133.1|	-	0.00043	20.8	0.6	0.002	18.6	0.5	2.1	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|298675383|ref|YP_003727133.1|	-	0.0068	15.7	0.0	0.011	15.0	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
AAA	PF00004.29	gi|298675383|ref|YP_003727133.1|	-	0.0091	16.4	0.7	0.15	12.5	0.7	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RsgA_GTPase	PF03193.16	gi|298675383|ref|YP_003727133.1|	-	0.019	14.9	0.1	0.039	13.9	0.1	1.5	1	0	0	1	1	1	0	RsgA	GTPase
AAA_22	PF13401.6	gi|298675383|ref|YP_003727133.1|	-	0.033	14.4	0.2	0.31	11.3	0.2	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|298675383|ref|YP_003727133.1|	-	0.034	13.9	0.2	0.091	12.5	0.1	1.9	1	1	1	2	2	2	0	AAA	domain
SRP54	PF00448.22	gi|298675383|ref|YP_003727133.1|	-	0.061	13.0	0.1	0.17	11.5	0.1	1.7	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_29	PF13555.6	gi|298675383|ref|YP_003727133.1|	-	0.064	13.0	0.2	0.15	11.8	0.2	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.14	gi|298675383|ref|YP_003727133.1|	-	0.089	12.7	0.0	0.19	11.7	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC2_membrane_2	PF12679.7	gi|298675384|ref|YP_003727134.1|	-	1.2e-31	110.1	21.6	1.4e-30	106.5	21.6	1.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|298675384|ref|YP_003727134.1|	-	0.04	13.9	24.9	0.018	15.0	19.1	2.4	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.6	gi|298675384|ref|YP_003727134.1|	-	0.08	12.5	37.2	0.03	13.9	28.3	2.9	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.7	gi|298675384|ref|YP_003727134.1|	-	2.1	7.4	40.9	0.13	11.4	33.2	2.4	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|298675385|ref|YP_003727135.1|	-	9.4e-34	117.0	13.3	5.3e-33	114.5	13.3	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.7	gi|298675385|ref|YP_003727135.1|	-	2.1e-06	27.1	21.3	2.1e-06	27.1	21.3	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|298675385|ref|YP_003727135.1|	-	0.00011	22.2	17.5	0.00011	22.2	17.5	2.2	2	1	1	3	3	3	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.6	gi|298675385|ref|YP_003727135.1|	-	1	8.9	32.2	2.1	7.9	28.9	2.6	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
PD40	PF07676.12	gi|298675386|ref|YP_003727136.1|	-	4.2e-19	68.0	4.2	0.00016	21.5	0.0	5.8	5	0	0	5	5	5	4	WD40-like	Beta	Propeller	Repeat
eIF2A	PF08662.11	gi|298675386|ref|YP_003727136.1|	-	1.2e-07	31.8	0.3	0.018	14.9	0.0	4.5	3	1	1	4	4	4	1	Eukaryotic	translation	initiation	factor	eIF2A
DPPIV_N	PF00930.21	gi|298675386|ref|YP_003727136.1|	-	1.5e-07	30.6	4.8	0.036	12.8	0.1	5.9	4	2	2	6	6	6	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
ANAPC4_WD40	PF12894.7	gi|298675386|ref|YP_003727136.1|	-	0.0021	18.3	0.2	14	6.0	0.0	4.5	4	3	1	5	5	5	1	Anaphase-promoting	complex	subunit	4	WD40	domain
PEGA	PF08308.11	gi|298675386|ref|YP_003727136.1|	-	0.013	15.4	0.5	0.013	15.4	0.5	2.2	2	0	0	2	2	2	0	PEGA	domain
Lactonase	PF10282.9	gi|298675386|ref|YP_003727136.1|	-	0.039	13.2	0.1	2.7	7.2	0.0	2.9	3	0	0	3	3	3	0	Lactonase,	7-bladed	beta-propeller
Gmad1	PF10647.9	gi|298675386|ref|YP_003727136.1|	-	0.11	12.3	0.0	59	3.3	0.0	3.5	3	1	1	4	4	4	0	Lipoprotein	LpqB	beta-propeller	domain
Peptidase_S9_N	PF02897.15	gi|298675386|ref|YP_003727136.1|	-	0.13	11.0	2.3	0.39	9.5	0.1	2.7	3	1	1	4	4	4	0	Prolyl	oligopeptidase,	N-terminal	beta-propeller	domain
Reprolysin_3	PF13582.6	gi|298675389|ref|YP_003727139.1|	-	0.00011	22.7	0.0	0.00017	22.1	0.0	1.2	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_5	PF13688.6	gi|298675389|ref|YP_003727139.1|	-	0.00096	19.4	0.3	0.0013	18.9	0.3	1.3	1	0	0	1	1	1	1	Metallo-peptidase	family	M12
Peptidase_M90	PF06167.12	gi|298675389|ref|YP_003727139.1|	-	0.13	11.9	0.1	0.16	11.6	0.1	1.1	1	0	0	1	1	1	0	Glucose-regulated	metallo-peptidase	M90
Thioredoxin_14	PF18402.1	gi|298675390|ref|YP_003727140.1|	-	0.036	14.0	0.0	0.046	13.7	0.0	1.2	1	0	0	1	1	1	0	Thioredoxin-like	domain
Pilin_N	PF07790.11	gi|298675390|ref|YP_003727140.1|	-	0.077	13.9	0.0	0.32	11.9	0.0	1.9	2	0	0	2	2	2	0	Archaeal	Type	IV	pilin,	N-terminal
O-antigen_lig	PF13425.6	gi|298675390|ref|YP_003727140.1|	-	0.2	10.4	0.4	0.2	10.4	0.4	1.0	1	0	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
ABC2_membrane_2	PF12679.7	gi|298675391|ref|YP_003727141.1|	-	1.5e-30	106.5	18.1	1.9e-30	106.2	18.1	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
CcmB	PF03379.13	gi|298675391|ref|YP_003727141.1|	-	0.0013	18.3	7.8	0.003	17.1	7.5	1.7	1	1	0	1	1	1	1	CcmB	protein
ABC2_membrane_5	PF13346.6	gi|298675391|ref|YP_003727141.1|	-	0.0016	18.0	20.3	0.0016	18.0	20.3	3.7	3	1	0	3	3	3	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|298675391|ref|YP_003727141.1|	-	0.0039	17.2	14.7	0.0039	17.2	14.7	3.0	2	1	0	3	3	3	1	ABC-2	family	transporter	protein
SafA	PF17073.5	gi|298675391|ref|YP_003727141.1|	-	0.064	13.2	1.2	0.71	9.9	0.0	2.8	2	0	0	2	2	2	0	Two-component-system	connector	protein
ABC2_membrane_2	PF12679.7	gi|298675392|ref|YP_003727142.1|	-	1.6e-32	113.0	20.9	3.1e-31	108.7	20.9	2.0	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|298675392|ref|YP_003727142.1|	-	5.7e-06	26.4	20.7	5.7e-06	26.4	20.7	2.0	2	0	0	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.6	gi|298675392|ref|YP_003727142.1|	-	0.018	14.6	34.2	0.015	14.9	30.1	2.5	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.7	gi|298675392|ref|YP_003727142.1|	-	0.058	12.5	38.6	0.18	10.9	37.8	2.1	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
PhoLip_ATPase_C	PF16212.5	gi|298675392|ref|YP_003727142.1|	-	0.26	11.0	23.9	0.82	9.4	23.9	1.9	1	1	0	1	1	1	0	Phospholipid-translocating	P-type	ATPase	C-terminal
ABC2_membrane	PF01061.24	gi|298675392|ref|YP_003727142.1|	-	0.33	10.4	31.3	0.065	12.6	25.4	2.2	2	0	0	2	2	2	0	ABC-2	type	transporter
UPF0370	PF13980.6	gi|298675392|ref|YP_003727142.1|	-	0.73	9.9	4.2	14	5.8	0.4	2.8	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0370)
DUF3687	PF12459.8	gi|298675392|ref|YP_003727142.1|	-	6	6.5	8.6	1.1	8.8	3.3	2.4	2	0	0	2	2	2	0	D-Ala-teichoic	acid	biosynthesis	protein
DPPIV_N	PF00930.21	gi|298675393|ref|YP_003727143.1|	-	2.9e-11	42.7	3.2	0.00011	21.1	0.1	6.0	3	2	3	6	6	6	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
DUF5050	PF16472.5	gi|298675393|ref|YP_003727143.1|	-	1e-10	41.3	2.6	7e-10	38.6	2.5	2.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF5050)
PD40	PF07676.12	gi|298675393|ref|YP_003727143.1|	-	6.8e-06	25.9	3.0	1.7	8.7	0.3	5.9	5	0	0	5	5	5	2	WD40-like	Beta	Propeller	Repeat
PEGA	PF08308.11	gi|298675393|ref|YP_003727143.1|	-	4.9e-05	23.2	1.5	0.00012	21.9	0.4	2.3	2	1	0	2	2	2	1	PEGA	domain
CarbopepD_reg_2	PF13715.6	gi|298675393|ref|YP_003727143.1|	-	8.4e-05	22.5	1.9	0.0015	18.5	0.4	2.7	2	0	0	2	2	2	1	CarboxypepD_reg-like	domain
CarboxypepD_reg	PF13620.6	gi|298675393|ref|YP_003727143.1|	-	0.00069	19.8	1.0	0.018	15.3	0.1	2.5	2	0	0	2	2	2	1	Carboxypeptidase	regulatory-like	domain
Coatomer_WDAD	PF04053.14	gi|298675393|ref|YP_003727143.1|	-	0.026	13.6	1.1	0.069	12.2	0.3	1.9	2	0	0	2	2	2	0	Coatomer	WD	associated	region
DUF3139	PF11337.8	gi|298675393|ref|YP_003727143.1|	-	0.38	11.4	2.2	5	7.8	0.3	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
HTH_24	PF13412.6	gi|298675394|ref|YP_003727144.1|	-	1.4e-22	79.0	1.1	2.4e-10	39.8	0.2	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|298675394|ref|YP_003727144.1|	-	2.3e-07	30.6	0.1	0.002	18.0	0.0	2.4	2	0	0	2	2	2	2	MarR	family
HTH_5	PF01022.20	gi|298675394|ref|YP_003727144.1|	-	2.3e-07	30.5	0.0	0.00035	20.4	0.0	2.5	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|298675394|ref|YP_003727144.1|	-	1.6e-06	28.1	0.0	0.0002	21.3	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_41	PF14502.6	gi|298675394|ref|YP_003727144.1|	-	1.6e-06	27.7	0.0	0.048	13.4	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|298675394|ref|YP_003727144.1|	-	5.8e-05	23.0	0.2	0.013	15.4	0.1	2.5	2	0	0	2	2	2	1	HTH	domain
Mga	PF05043.13	gi|298675394|ref|YP_003727144.1|	-	0.0011	19.5	0.7	0.49	11.0	0.0	2.3	1	1	1	2	2	2	1	Mga	helix-turn-helix	domain
TnsD	PF15978.5	gi|298675394|ref|YP_003727144.1|	-	0.0018	17.4	0.7	0.0023	17.0	0.7	1.1	1	0	0	1	1	1	1	Tn7-like	transposition	protein	D
HTH_IclR	PF09339.10	gi|298675394|ref|YP_003727144.1|	-	0.0032	17.2	0.0	0.3	10.9	0.0	2.3	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_AsnC-type	PF13404.6	gi|298675394|ref|YP_003727144.1|	-	0.0038	17.0	0.0	0.18	11.6	0.0	2.3	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_34	PF13601.6	gi|298675394|ref|YP_003727144.1|	-	0.0052	16.9	0.2	0.81	9.9	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
GerE	PF00196.19	gi|298675394|ref|YP_003727144.1|	-	0.0053	16.3	1.7	0.19	11.3	0.1	2.6	2	1	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
TrmB	PF01978.19	gi|298675394|ref|YP_003727144.1|	-	0.0065	16.3	0.0	0.25	11.3	0.1	2.3	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
FaeA	PF04703.12	gi|298675394|ref|YP_003727144.1|	-	0.0097	16.3	0.0	0.025	14.9	0.0	1.7	1	0	0	1	1	1	1	FaeA-like	protein
MarR_2	PF12802.7	gi|298675394|ref|YP_003727144.1|	-	0.011	15.6	0.0	0.19	11.6	0.0	2.2	2	0	0	2	2	2	0	MarR	family
HTH_40	PF14493.6	gi|298675394|ref|YP_003727144.1|	-	0.013	16.0	2.6	0.42	11.1	0.5	2.5	1	1	1	2	2	2	0	Helix-turn-helix	domain
HTH_Tnp_Tc3_2	PF01498.18	gi|298675394|ref|YP_003727144.1|	-	0.016	15.4	0.2	0.69	10.2	0.1	2.3	2	0	0	2	2	2	0	Transposase
HTH_6	PF01418.17	gi|298675394|ref|YP_003727144.1|	-	0.017	15.1	0.3	0.46	10.5	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain,	rpiR	family
HTH_DeoR	PF08220.12	gi|298675394|ref|YP_003727144.1|	-	0.093	12.5	0.2	0.92	9.3	0.0	2.2	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|298675394|ref|YP_003727144.1|	-	0.11	12.2	0.0	0.22	11.2	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
RP-C	PF03428.13	gi|298675394|ref|YP_003727144.1|	-	0.11	12.1	0.0	1.6	8.3	0.0	2.1	2	0	0	2	2	2	0	Replication	protein	C	N-terminal	domain
HTH_30	PF13556.6	gi|298675394|ref|YP_003727144.1|	-	0.16	11.8	0.0	0.29	10.9	0.0	1.4	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
Acetyltransf_1	PF00583.25	gi|298675395|ref|YP_003727145.1|	-	2.2e-16	60.2	0.0	2.8e-16	59.8	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|298675395|ref|YP_003727145.1|	-	7e-10	39.2	0.0	1.1e-09	38.6	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|298675395|ref|YP_003727145.1|	-	6.7e-09	35.8	0.0	9.7e-09	35.2	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|298675395|ref|YP_003727145.1|	-	7e-07	29.1	0.0	2.1e-06	27.6	0.0	1.7	1	1	1	2	2	2	1	FR47-like	protein
Acetyltransf_4	PF13420.7	gi|298675395|ref|YP_003727145.1|	-	3.9e-06	27.1	0.2	4.9e-06	26.8	0.2	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|298675395|ref|YP_003727145.1|	-	0.00054	20.0	0.1	0.0093	16.0	0.0	2.1	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|298675395|ref|YP_003727145.1|	-	0.025	14.7	0.0	0.039	14.1	0.0	1.3	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Gln-synt_C	PF00120.24	gi|298675396|ref|YP_003727146.1|	-	9.6e-130	432.6	0.0	1.1e-129	432.3	0.0	1.0	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|298675396|ref|YP_003727146.1|	-	7e-33	112.2	0.1	1.7e-32	111.0	0.1	1.7	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
Gln-synt_N_2	PF16952.5	gi|298675396|ref|YP_003727146.1|	-	0.033	14.0	0.0	0.067	13.0	0.0	1.6	1	1	0	1	1	1	0	Glutamine	synthetase	N-terminal	domain
DUF92	PF01940.16	gi|298675397|ref|YP_003727147.1|	-	0.028	13.8	0.0	0.047	13.1	0.0	1.2	1	0	0	1	1	1	0	Integral	membrane	protein	DUF92
ABC_tran	PF00005.27	gi|298675398|ref|YP_003727148.1|	-	4.1e-25	88.9	0.0	1e-24	87.6	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675398|ref|YP_003727148.1|	-	1.1e-12	48.4	0.1	1.1e-08	35.3	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|298675398|ref|YP_003727148.1|	-	2.2e-05	24.3	0.0	0.13	12.0	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
DUF4162	PF13732.6	gi|298675398|ref|YP_003727148.1|	-	0.00023	21.8	0.1	0.00075	20.2	0.0	1.9	2	0	0	2	2	1	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.6	gi|298675398|ref|YP_003727148.1|	-	0.00046	20.7	0.7	0.0021	18.6	0.6	2.1	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|298675398|ref|YP_003727148.1|	-	0.0068	15.7	0.0	0.011	15.0	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
AAA	PF00004.29	gi|298675398|ref|YP_003727148.1|	-	0.0091	16.4	0.7	0.15	12.5	0.7	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RsgA_GTPase	PF03193.16	gi|298675398|ref|YP_003727148.1|	-	0.02	14.8	0.1	0.039	13.9	0.1	1.5	1	0	0	1	1	1	0	RsgA	GTPase
AAA_22	PF13401.6	gi|298675398|ref|YP_003727148.1|	-	0.033	14.5	0.2	0.36	11.1	0.2	2.2	1	1	1	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|298675398|ref|YP_003727148.1|	-	0.034	13.9	0.3	0.086	12.6	0.2	1.9	1	1	1	2	2	2	0	AAA	domain
SRP54	PF00448.22	gi|298675398|ref|YP_003727148.1|	-	0.06	13.0	0.1	0.17	11.5	0.1	1.7	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_29	PF13555.6	gi|298675398|ref|YP_003727148.1|	-	0.064	13.0	0.2	0.15	11.8	0.2	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.14	gi|298675398|ref|YP_003727148.1|	-	0.089	12.7	0.0	0.19	11.7	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NPCBM_assoc	PF10633.9	gi|298675399|ref|YP_003727149.1|	-	4e-12	46.2	1.4	0.0015	18.7	0.0	4.4	3	1	1	4	4	4	4	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.11	gi|298675399|ref|YP_003727149.1|	-	0.00017	21.8	8.4	0.01	16.1	0.8	3.4	3	0	0	3	3	3	1	CARDB
fn3_5	PF06280.12	gi|298675399|ref|YP_003727149.1|	-	0.0029	18.3	1.9	4.9	7.9	0.0	4.0	3	3	1	4	4	4	2	Fn3-like	domain
DUF11	PF01345.18	gi|298675399|ref|YP_003727149.1|	-	0.0099	16.2	7.6	0.16	12.3	0.6	3.9	4	1	0	4	4	4	1	Domain	of	unknown	function	DUF11
DUF5060	PF16586.5	gi|298675399|ref|YP_003727149.1|	-	0.027	14.8	0.1	0.11	12.9	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5060)
AP3B1_C	PF14796.6	gi|298675399|ref|YP_003727149.1|	-	0.042	14.1	0.0	0.1	12.9	0.0	1.6	1	0	0	1	1	1	0	Clathrin-adaptor	complex-3	beta-1	subunit	C-terminal
Ig_GlcNase	PF18368.1	gi|298675399|ref|YP_003727149.1|	-	0.2	11.8	0.9	2	8.6	0.0	3.0	5	0	0	5	5	5	0	Exo-beta-D-glucosaminidase	Ig-fold	domain
ABC2_membrane_2	PF12679.7	gi|298675400|ref|YP_003727150.1|	-	7e-31	107.6	24.2	5.1e-30	104.8	24.2	1.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.6	gi|298675400|ref|YP_003727150.1|	-	3.9e-05	23.3	20.2	3.9e-05	23.3	20.2	2.9	2	1	1	3	3	3	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|298675400|ref|YP_003727150.1|	-	0.0017	18.3	17.7	0.0017	18.3	17.7	2.3	2	0	0	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.7	gi|298675400|ref|YP_003727150.1|	-	4.5	6.3	40.6	28	3.7	40.4	2.3	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|298675401|ref|YP_003727151.1|	-	1.9e-32	112.7	16.5	2.8e-32	112.2	16.5	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.7	gi|298675401|ref|YP_003727151.1|	-	3.9e-06	26.2	21.4	3.9e-06	26.2	21.4	1.7	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|298675401|ref|YP_003727151.1|	-	0.00069	19.6	19.7	0.00069	19.6	19.7	2.3	2	1	1	3	3	3	1	ABC-2	family	transporter	protein
PD40	PF07676.12	gi|298675402|ref|YP_003727152.1|	-	7.6e-18	64.0	5.7	0.00017	21.4	0.0	6.0	5	1	1	6	6	6	4	WD40-like	Beta	Propeller	Repeat
eIF2A	PF08662.11	gi|298675402|ref|YP_003727152.1|	-	5.2e-08	33.0	0.4	0.042	13.7	0.0	4.6	3	2	1	4	4	4	2	Eukaryotic	translation	initiation	factor	eIF2A
DPPIV_N	PF00930.21	gi|298675402|ref|YP_003727152.1|	-	2.5e-07	29.8	5.9	0.041	12.6	0.1	5.9	4	2	2	6	6	6	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
ANAPC4_WD40	PF12894.7	gi|298675402|ref|YP_003727152.1|	-	0.00062	20.0	0.2	7.4	6.9	0.1	4.5	3	3	2	5	5	5	3	Anaphase-promoting	complex	subunit	4	WD40	domain
Peptidase_S9_N	PF02897.15	gi|298675402|ref|YP_003727152.1|	-	0.00081	18.3	4.2	0.43	9.3	0.1	3.3	3	1	1	4	4	4	2	Prolyl	oligopeptidase,	N-terminal	beta-propeller	domain
PEGA	PF08308.11	gi|298675402|ref|YP_003727152.1|	-	0.0013	18.5	0.5	0.004	17.0	0.5	1.8	1	0	0	1	1	1	1	PEGA	domain
Lactonase	PF10282.9	gi|298675402|ref|YP_003727152.1|	-	0.037	13.3	0.8	3.1	7.0	0.0	3.0	3	0	0	3	3	3	0	Lactonase,	7-bladed	beta-propeller
CarbopepD_reg_2	PF13715.6	gi|298675402|ref|YP_003727152.1|	-	0.53	10.3	4.9	0.14	12.2	0.6	2.3	2	0	0	2	2	2	0	CarboxypepD_reg-like	domain
CssAB	PF16831.5	gi|298675403|ref|YP_003727153.1|	-	0.077	13.4	0.1	0.092	13.1	0.1	1.1	1	0	0	1	1	1	0	CS6	fimbrial	subunits	A	and	B,	Coli	surface	antigen	6
DUF4969	PF16339.5	gi|298675404|ref|YP_003727154.1|	-	0.18	12.2	1.5	0.76	10.2	0.4	2.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4969)
HTH_24	PF13412.6	gi|298675405|ref|YP_003727155.1|	-	8.2e-22	76.5	1.1	1.1e-10	40.9	0.1	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|298675405|ref|YP_003727155.1|	-	7.6e-07	29.0	0.1	0.0052	16.7	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_20	PF12840.7	gi|298675405|ref|YP_003727155.1|	-	1.1e-06	28.6	0.0	5.5e-05	23.1	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|298675405|ref|YP_003727155.1|	-	3.7e-06	26.7	0.0	0.00046	20.0	0.0	2.3	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_41	PF14502.6	gi|298675405|ref|YP_003727155.1|	-	8.9e-06	25.3	0.0	0.16	11.7	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|298675405|ref|YP_003727155.1|	-	0.00067	19.5	0.2	0.014	15.3	0.0	2.4	2	0	0	2	2	2	1	HTH	domain
TnsD	PF15978.5	gi|298675405|ref|YP_003727155.1|	-	0.0018	17.4	0.4	0.0024	16.9	0.4	1.1	1	0	0	1	1	1	1	Tn7-like	transposition	protein	D
Mga	PF05043.13	gi|298675405|ref|YP_003727155.1|	-	0.003	18.1	0.3	0.95	10.1	0.0	2.4	1	1	1	2	2	2	1	Mga	helix-turn-helix	domain
MarR_2	PF12802.7	gi|298675405|ref|YP_003727155.1|	-	0.0052	16.6	0.0	0.041	13.8	0.0	2.0	2	0	0	2	2	2	1	MarR	family
HTH_40	PF14493.6	gi|298675405|ref|YP_003727155.1|	-	0.01	16.2	1.8	0.14	12.6	0.5	2.3	1	1	1	2	2	2	0	Helix-turn-helix	domain
FaeA	PF04703.12	gi|298675405|ref|YP_003727155.1|	-	0.015	15.7	0.0	0.036	14.4	0.0	1.7	1	0	0	1	1	1	0	FaeA-like	protein
GerE	PF00196.19	gi|298675405|ref|YP_003727155.1|	-	0.016	14.8	0.1	0.076	12.6	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
HTH_IclR	PF09339.10	gi|298675405|ref|YP_003727155.1|	-	0.019	14.7	0.0	0.22	11.4	0.0	2.2	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|298675405|ref|YP_003727155.1|	-	0.031	13.9	0.0	0.06	13.0	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_38	PF13936.6	gi|298675405|ref|YP_003727155.1|	-	0.05	13.4	0.0	0.094	12.5	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.19	gi|298675405|ref|YP_003727155.1|	-	0.061	13.2	0.0	0.37	10.7	0.0	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.6	gi|298675405|ref|YP_003727155.1|	-	0.075	13.2	0.1	1.8	8.8	0.0	2.2	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_6	PF01418.17	gi|298675405|ref|YP_003727155.1|	-	0.086	12.8	0.3	1.9	8.5	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain,	rpiR	family
Sortase	PF04203.13	gi|298675405|ref|YP_003727155.1|	-	0.099	12.4	0.1	0.16	11.8	0.1	1.3	1	0	0	1	1	1	0	Sortase	domain
HTH_Tnp_Tc3_2	PF01498.18	gi|298675405|ref|YP_003727155.1|	-	0.12	12.7	0.1	2.9	8.2	0.0	2.4	2	0	0	2	2	2	0	Transposase
HTH_30	PF13556.6	gi|298675405|ref|YP_003727155.1|	-	0.14	12.0	0.0	0.25	11.2	0.0	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
DUF997	PF06196.12	gi|298675405|ref|YP_003727155.1|	-	1.1	9.4	3.6	0.27	11.3	0.3	1.7	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF997)
DDE_Tnp_1	PF01609.21	gi|298675407|ref|YP_003727157.1|	-	7.4e-15	55.2	0.2	2e-14	53.8	0.2	1.7	1	1	0	1	1	1	1	Transposase	DDE	domain
SWIM	PF04434.17	gi|298675407|ref|YP_003727157.1|	-	0.014	15.1	1.5	0.029	14.0	1.5	1.6	1	0	0	1	1	1	0	SWIM	zinc	finger
Spore_coat_CotO	PF14153.6	gi|298675408|ref|YP_003727158.1|	-	0.0058	16.6	0.0	0.0069	16.3	0.0	1.0	1	0	0	1	1	1	1	Spore	coat	protein	CotO
Kringle	PF00051.18	gi|298675408|ref|YP_003727158.1|	-	0.017	15.4	0.0	0.019	15.3	0.0	1.1	1	0	0	1	1	1	0	Kringle	domain
Glu_synthase	PF01645.17	gi|298675409|ref|YP_003727159.1|	-	5.8e-13	48.7	0.0	1.7e-11	43.8	0.0	2.1	1	1	0	1	1	1	1	Conserved	region	in	glutamate	synthase
DUF1284	PF06935.11	gi|298675410|ref|YP_003727160.1|	-	4.7e-23	81.6	3.0	5.4e-23	81.4	3.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1284)
NRD1_2	PF01995.16	gi|298675411|ref|YP_003727161.1|	-	5.4e-95	317.2	4.2	7.8e-95	316.7	4.2	1.2	1	0	0	1	1	1	1	NrpR	regulatory	domains	NRD1	and	2
HTH_12	PF08461.10	gi|298675411|ref|YP_003727161.1|	-	6.9e-31	106.0	1.2	1.3e-30	105.1	1.2	1.5	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
HTH_21	PF13276.6	gi|298675411|ref|YP_003727161.1|	-	0.014	15.6	0.1	0.032	14.4	0.1	1.6	1	0	0	1	1	1	0	HTH-like	domain
HTH_20	PF12840.7	gi|298675411|ref|YP_003727161.1|	-	0.12	12.4	0.0	0.29	11.2	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
ABC1	PF03109.16	gi|298675412|ref|YP_003727162.1|	-	2.8e-38	130.7	0.1	5.2e-38	129.9	0.1	1.5	1	0	0	1	1	1	1	ABC1	family
Pkinase	PF00069.25	gi|298675412|ref|YP_003727162.1|	-	0.0023	17.3	0.1	0.0049	16.3	0.1	1.5	1	0	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.23	gi|298675412|ref|YP_003727162.1|	-	0.019	14.9	0.2	0.05	13.5	0.2	1.6	1	0	0	1	1	1	0	Phosphotransferase	enzyme	family
DUF3986	PF13143.6	gi|298675412|ref|YP_003727162.1|	-	0.11	13.5	5.1	0.17	12.9	2.4	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3986)
DUF3303	PF11746.8	gi|298675413|ref|YP_003727163.1|	-	4.9e-08	33.1	0.1	5.7e-08	32.9	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3303)
Y_Y_Y	PF07495.13	gi|298675414|ref|YP_003727164.1|	-	0.00034	20.5	0.0	0.66	10.0	0.0	2.7	2	0	0	2	2	2	2	Y_Y_Y	domain
MBG	PF17883.1	gi|298675414|ref|YP_003727164.1|	-	0.013	16.1	0.3	0.033	14.8	0.2	1.9	1	1	0	1	1	1	0	MBG	domain
Big_7	PF17957.1	gi|298675414|ref|YP_003727164.1|	-	0.015	16.0	0.2	0.12	13.2	0.1	2.4	1	1	1	2	2	2	0	Bacterial	Ig	domain
Big_6	PF17936.1	gi|298675414|ref|YP_003727164.1|	-	0.08	13.2	0.1	0.45	10.8	0.0	2.2	3	0	0	3	3	3	0	Bacterial	Ig	domain
Gmad2	PF10648.9	gi|298675414|ref|YP_003727164.1|	-	0.088	13.1	0.1	2.6	8.3	0.0	3.2	2	1	0	2	2	2	0	Immunoglobulin-like	domain	of	bacterial	spore	germination
Phasin	PF05597.11	gi|298675415|ref|YP_003727165.1|	-	2.6e-09	37.1	7.4	3.4e-05	23.8	2.2	2.0	1	1	1	2	2	2	2	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
BMFP	PF04380.13	gi|298675415|ref|YP_003727165.1|	-	0.00076	19.9	4.3	0.00076	19.9	4.3	1.8	1	1	1	2	2	2	2	Membrane	fusogenic	activity
Spo0A_C	PF08769.11	gi|298675415|ref|YP_003727165.1|	-	0.011	15.8	0.6	0.013	15.6	0.6	1.1	1	0	0	1	1	1	0	Sporulation	initiation	factor	Spo0A	C	terminal
Osmo_CC	PF08946.10	gi|298675415|ref|YP_003727165.1|	-	0.016	15.4	2.6	0.016	15.4	2.6	3.0	2	1	1	3	3	3	0	Osmosensory	transporter	coiled	coil
DUF3349	PF11829.8	gi|298675415|ref|YP_003727165.1|	-	0.033	15.0	2.6	0.26	12.1	2.6	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3349)
DUF1002	PF06207.11	gi|298675415|ref|YP_003727165.1|	-	0.058	12.9	9.1	0.065	12.8	9.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1002)
sCache_2	PF17200.4	gi|298675415|ref|YP_003727165.1|	-	0.079	12.8	0.4	0.079	12.8	0.4	2.0	1	1	1	2	2	2	0	Single	Cache	domain	2
PRESAN	PF09687.10	gi|298675415|ref|YP_003727165.1|	-	0.08	13.5	11.2	0.1	13.2	11.2	1.1	1	0	0	1	1	1	0	Plasmodium	RESA	N-terminal
Uds1	PF15456.6	gi|298675415|ref|YP_003727165.1|	-	0.22	11.7	6.5	0.33	11.1	6.5	1.3	1	1	0	1	1	1	0	Up-regulated	During	Septation
CLZ	PF16526.5	gi|298675415|ref|YP_003727165.1|	-	0.32	11.4	10.1	0.16	12.4	1.6	2.6	1	1	2	3	3	3	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
RNase_J_C	PF17770.1	gi|298675415|ref|YP_003727165.1|	-	0.48	11.5	8.4	1.6	9.8	4.3	2.3	1	1	1	2	2	2	0	Ribonuclease	J	C-terminal	domain
YtxH	PF12732.7	gi|298675415|ref|YP_003727165.1|	-	0.76	10.4	9.1	0.82	10.2	3.1	2.2	1	1	1	2	2	2	0	YtxH-like	protein
Fib_alpha	PF08702.10	gi|298675415|ref|YP_003727165.1|	-	1.6	9.0	10.4	2.3	8.4	10.4	1.2	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
MtrG	PF04210.13	gi|298675415|ref|YP_003727165.1|	-	4.6	7.2	10.2	0.45	10.4	0.4	2.9	1	1	2	3	3	3	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
TMPIT	PF07851.13	gi|298675415|ref|YP_003727165.1|	-	5.3	6.2	9.8	5.9	6.0	9.8	1.0	1	0	0	1	1	1	0	TMPIT-like	protein
XhlA	PF10779.9	gi|298675415|ref|YP_003727165.1|	-	6.3	7.1	11.1	20	5.4	5.8	2.5	1	1	1	2	2	2	0	Haemolysin	XhlA
ABC_tran	PF00005.27	gi|298675416|ref|YP_003727166.1|	-	2.6e-53	180.2	0.0	6.1e-28	98.1	0.0	2.4	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.6	gi|298675416|ref|YP_003727166.1|	-	2.6e-08	34.0	12.7	0.0029	17.5	0.5	4.4	2	2	1	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
RsgA_GTPase	PF03193.16	gi|298675416|ref|YP_003727166.1|	-	1.9e-07	31.1	1.6	0.00052	20.0	0.2	2.5	2	1	0	2	2	2	2	RsgA	GTPase
AAA_29	PF13555.6	gi|298675416|ref|YP_003727166.1|	-	2.5e-07	30.3	2.2	0.0095	15.7	0.1	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|298675416|ref|YP_003727166.1|	-	8.3e-07	29.4	1.6	0.11	12.8	0.0	3.8	4	0	0	4	4	4	2	AAA	domain
AAA_16	PF13191.6	gi|298675416|ref|YP_003727166.1|	-	1.2e-06	29.0	0.1	0.043	14.2	0.0	2.7	2	1	0	2	2	2	2	AAA	ATPase	domain
AAA_30	PF13604.6	gi|298675416|ref|YP_003727166.1|	-	1.5e-06	28.1	0.0	0.063	13.0	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
TniB	PF05621.11	gi|298675416|ref|YP_003727166.1|	-	1e-05	25.1	1.5	0.017	14.6	0.0	4.0	4	0	0	4	4	4	1	Bacterial	TniB	protein
ATPase_2	PF01637.18	gi|298675416|ref|YP_003727166.1|	-	1.7e-05	24.9	0.5	0.45	10.4	0.0	3.4	3	1	0	3	3	3	2	ATPase	domain	predominantly	from	Archaea
cobW	PF02492.19	gi|298675416|ref|YP_003727166.1|	-	3.5e-05	23.5	0.3	0.3	10.7	0.0	2.6	2	0	0	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
SbcCD_C	PF13558.6	gi|298675416|ref|YP_003727166.1|	-	7.5e-05	22.9	0.5	0.024	14.8	0.1	3.4	2	2	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
MobB	PF03205.14	gi|298675416|ref|YP_003727166.1|	-	8.8e-05	22.4	0.2	0.38	10.7	0.1	2.4	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NB-ARC	PF00931.22	gi|298675416|ref|YP_003727166.1|	-	0.00013	21.3	0.2	0.23	10.6	0.1	2.4	2	0	0	2	2	2	2	NB-ARC	domain
AAA_23	PF13476.6	gi|298675416|ref|YP_003727166.1|	-	0.00015	22.3	12.6	0.011	16.3	0.3	3.1	3	1	1	4	4	3	2	AAA	domain
AAA_15	PF13175.6	gi|298675416|ref|YP_003727166.1|	-	0.00015	21.6	5.3	0.00083	19.2	0.2	2.9	2	1	0	2	2	2	1	AAA	ATPase	domain
PRK	PF00485.18	gi|298675416|ref|YP_003727166.1|	-	0.00099	18.9	0.2	0.33	10.7	0.2	2.3	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
Zeta_toxin	PF06414.12	gi|298675416|ref|YP_003727166.1|	-	0.0011	18.3	0.0	0.73	9.1	0.0	2.3	2	0	0	2	2	2	2	Zeta	toxin
AAA_18	PF13238.6	gi|298675416|ref|YP_003727166.1|	-	0.0013	19.3	0.3	1.3	9.6	0.1	3.5	3	0	0	3	3	3	1	AAA	domain
AAA_25	PF13481.6	gi|298675416|ref|YP_003727166.1|	-	0.0025	17.4	0.2	1.6	8.3	0.1	3.4	4	0	0	4	4	3	1	AAA	domain
T2SSE	PF00437.20	gi|298675416|ref|YP_003727166.1|	-	0.0029	16.7	0.0	0.15	11.1	0.0	2.2	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ABC_ATPase	PF09818.9	gi|298675416|ref|YP_003727166.1|	-	0.003	16.4	2.2	1.7	7.4	0.1	3.5	4	0	0	4	4	4	1	Predicted	ATPase	of	the	ABC	class
AAA_33	PF13671.6	gi|298675416|ref|YP_003727166.1|	-	0.0031	17.7	0.2	0.8	9.9	0.0	2.7	3	0	0	3	3	2	1	AAA	domain
PIF1	PF05970.14	gi|298675416|ref|YP_003727166.1|	-	0.0039	16.4	0.4	2.9	7.0	0.0	3.5	3	1	1	4	4	4	1	PIF1-like	helicase
PduV-EutP	PF10662.9	gi|298675416|ref|YP_003727166.1|	-	0.0041	16.9	0.2	1.6	8.5	0.0	2.4	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
TsaE	PF02367.17	gi|298675416|ref|YP_003727166.1|	-	0.0045	17.0	0.2	1.9	8.5	0.0	2.4	2	0	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
NACHT	PF05729.12	gi|298675416|ref|YP_003727166.1|	-	0.0059	16.5	4.1	0.91	9.4	0.3	3.0	4	0	0	4	4	2	2	NACHT	domain
G-alpha	PF00503.20	gi|298675416|ref|YP_003727166.1|	-	0.0071	15.5	0.3	0.52	9.4	0.0	2.5	2	1	0	2	2	2	1	G-protein	alpha	subunit
NTPase_1	PF03266.15	gi|298675416|ref|YP_003727166.1|	-	0.01	15.7	0.7	0.53	10.2	0.1	2.5	2	0	0	2	2	2	0	NTPase
AAA	PF00004.29	gi|298675416|ref|YP_003727166.1|	-	0.012	16.0	0.2	38	4.7	0.0	4.0	4	0	0	4	4	4	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.6	gi|298675416|ref|YP_003727166.1|	-	0.012	15.3	0.5	6	6.5	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.23	gi|298675416|ref|YP_003727166.1|	-	0.014	15.4	0.7	8.9	6.4	0.0	2.8	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_28	PF13521.6	gi|298675416|ref|YP_003727166.1|	-	0.019	15.2	0.8	4.2	7.6	0.1	2.6	2	0	0	2	2	2	0	AAA	domain
APS_kinase	PF01583.20	gi|298675416|ref|YP_003727166.1|	-	0.025	14.5	0.1	8.7	6.2	0.0	2.3	2	0	0	2	2	2	0	Adenylylsulphate	kinase
PhoH	PF02562.16	gi|298675416|ref|YP_003727166.1|	-	0.026	14.0	0.3	12	5.3	0.0	3.0	3	0	0	3	3	3	0	PhoH-like	protein
AAA_14	PF13173.6	gi|298675416|ref|YP_003727166.1|	-	0.041	13.9	0.3	19	5.3	0.2	3.5	3	1	0	3	3	3	0	AAA	domain
DLIC	PF05783.11	gi|298675416|ref|YP_003727166.1|	-	0.071	11.9	0.3	9	5.0	0.1	2.3	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
DUF87	PF01935.17	gi|298675416|ref|YP_003727166.1|	-	0.073	13.2	0.8	13	5.8	0.0	2.7	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
Rad17	PF03215.15	gi|298675416|ref|YP_003727166.1|	-	0.08	12.9	0.1	4.2	7.2	0.0	2.4	2	0	0	2	2	2	0	Rad17	P-loop	domain
Pox_A32	PF04665.12	gi|298675416|ref|YP_003727166.1|	-	0.1	12.1	0.2	15	4.9	0.0	2.5	2	0	0	2	2	2	0	Poxvirus	A32	protein
TrwB_AAD_bind	PF10412.9	gi|298675416|ref|YP_003727166.1|	-	0.13	11.2	0.2	4.3	6.1	0.0	2.2	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_13	PF13166.6	gi|298675416|ref|YP_003727166.1|	-	0.23	10.1	1.1	6.8	5.2	0.1	2.5	3	0	0	3	3	3	0	AAA	domain
ATPase	PF06745.13	gi|298675416|ref|YP_003727166.1|	-	0.23	10.8	1.1	12	5.2	0.2	2.7	2	0	0	2	2	2	0	KaiC
PcrB	PF01884.17	gi|298675417|ref|YP_003727167.1|	-	6.6e-67	225.3	0.8	7.8e-67	225.0	0.8	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.21	gi|298675417|ref|YP_003727167.1|	-	3.7e-07	29.8	0.1	9.3e-07	28.5	0.0	1.7	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
NanE	PF04131.14	gi|298675417|ref|YP_003727167.1|	-	0.0019	17.4	0.5	0.012	14.8	0.1	2.0	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
Ribul_P_3_epim	PF00834.19	gi|298675417|ref|YP_003727167.1|	-	0.037	13.4	0.1	0.064	12.6	0.1	1.4	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
G3P_antiterm	PF04309.12	gi|298675417|ref|YP_003727167.1|	-	0.046	13.1	0.1	0.087	12.2	0.1	1.4	1	0	0	1	1	1	0	Glycerol-3-phosphate	responsive	antiterminator
MlrC_C	PF07171.12	gi|298675417|ref|YP_003727167.1|	-	0.093	12.9	1.5	1.6	8.9	0.2	2.1	2	0	0	2	2	2	0	MlrC	C-terminus
ThiG	PF05690.14	gi|298675417|ref|YP_003727167.1|	-	0.17	11.2	4.8	0.18	11.1	0.9	2.2	2	1	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
Ribosomal_L40e	PF01020.17	gi|298675418|ref|YP_003727168.1|	-	8e-05	22.4	5.7	9.7e-05	22.2	5.7	1.1	1	0	0	1	1	1	1	Ribosomal	L40e	family
DNA_RNApol_7kD	PF03604.13	gi|298675418|ref|YP_003727168.1|	-	0.00044	19.9	3.7	0.0009	18.9	3.7	1.4	1	0	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
DZR	PF12773.7	gi|298675418|ref|YP_003727168.1|	-	0.0011	18.9	1.0	0.0013	18.7	1.0	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|298675418|ref|YP_003727168.1|	-	0.0022	17.6	2.0	0.0028	17.3	2.0	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
HypA	PF01155.19	gi|298675418|ref|YP_003727168.1|	-	0.084	12.9	1.5	0.085	12.9	1.5	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
OrfB_IS605	PF01385.19	gi|298675419|ref|YP_003727169.1|	-	6.1e-27	94.2	2.1	1.5e-26	93.0	2.1	1.6	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675419|ref|YP_003727169.1|	-	1.7e-23	82.3	0.3	3.6e-23	81.3	0.3	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298675419|ref|YP_003727169.1|	-	1.8e-19	69.0	1.4	4e-19	67.8	1.4	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298675419|ref|YP_003727169.1|	-	0.012	15.7	0.3	0.03	14.5	0.3	1.6	1	0	0	1	1	1	0	Piccolo	Zn-finger
LemA	PF04011.12	gi|298675419|ref|YP_003727169.1|	-	0.023	14.6	1.3	0.38	10.6	0.3	2.3	2	0	0	2	2	2	0	LemA	family
Phage_GP20	PF06810.11	gi|298675419|ref|YP_003727169.1|	-	0.064	13.1	5.9	0.27	11.0	2.8	2.3	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
MapZ_EC1	PF18041.1	gi|298675419|ref|YP_003727169.1|	-	1.2	9.4	9.7	0.29	11.4	3.0	2.3	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
ATP-grasp_4	PF13535.6	gi|298675420|ref|YP_003727170.1|	-	3.6e-13	49.4	0.5	1.9e-12	47.1	0.5	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.14	gi|298675420|ref|YP_003727170.1|	-	0.0025	17.9	0.1	0.0054	16.8	0.1	1.7	1	1	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|298675420|ref|YP_003727170.1|	-	0.0066	16.0	0.0	0.013	15.0	0.0	1.4	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.13	gi|298675420|ref|YP_003727170.1|	-	0.0092	15.5	0.1	3.8	7.0	0.2	2.4	2	0	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
ATPgrasp_Ter	PF15632.6	gi|298675420|ref|YP_003727170.1|	-	0.011	15.4	0.0	0.029	14.1	0.0	1.7	2	0	0	2	2	2	0	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Amidohydro_1	PF01979.20	gi|298675421|ref|YP_003727171.1|	-	8.6e-53	179.8	1.2	1.1e-52	179.5	1.2	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|298675421|ref|YP_003727171.1|	-	1.7e-19	70.7	0.1	3.4e-15	56.5	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase	family
UbiA	PF01040.18	gi|298675422|ref|YP_003727172.1|	-	0.035	13.4	3.2	0.04	13.2	3.2	1.0	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
DUF1129	PF06570.11	gi|298675422|ref|YP_003727172.1|	-	0.75	9.2	4.5	0.8	9.2	4.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF3043	PF11241.8	gi|298675422|ref|YP_003727172.1|	-	0.99	9.4	2.3	1.1	9.3	2.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3043)
FixS	PF03597.15	gi|298675422|ref|YP_003727172.1|	-	4.6	7.0	8.9	6.6	6.5	3.8	2.1	2	0	0	2	2	2	0	Cytochrome	oxidase	maturation	protein	cbb3-type
Hist_deacetyl	PF00850.19	gi|298675423|ref|YP_003727173.1|	-	1.5e-87	293.9	0.1	2.2e-87	293.4	0.1	1.2	1	0	0	1	1	1	1	Histone	deacetylase	domain
Lar_N	PF09861.9	gi|298675424|ref|YP_003727174.1|	-	6.9e-71	237.6	0.0	1.1e-70	237.0	0.0	1.3	1	0	0	1	1	1	1	Lactate	racemase	N-terminal	domain
DUF362	PF04015.12	gi|298675424|ref|YP_003727174.1|	-	0.062	13.5	0.0	0.093	13.0	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF362)
SSF	PF00474.17	gi|298675425|ref|YP_003727175.1|	-	1e-61	209.1	41.4	1.4e-61	208.6	41.4	1.2	1	0	0	1	1	1	1	Sodium:solute	symporter	family
YniB	PF14002.6	gi|298675425|ref|YP_003727175.1|	-	0.021	14.6	0.2	0.021	14.6	0.2	2.7	3	0	0	3	3	3	0	YniB-like	protein
ATP19	PF11022.8	gi|298675425|ref|YP_003727175.1|	-	3.7	8.0	7.9	0.52	10.7	0.2	3.4	2	1	1	3	3	3	0	ATP	synthase	subunit	K
Methyltransf_31	PF13847.6	gi|298675427|ref|YP_003727177.1|	-	2.4e-24	85.8	0.0	4.2e-24	85.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298675427|ref|YP_003727177.1|	-	3e-22	79.1	0.0	5.4e-22	78.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298675427|ref|YP_003727177.1|	-	1.8e-21	76.6	0.0	3.6e-21	75.7	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|298675427|ref|YP_003727177.1|	-	1e-18	67.9	0.0	2e-18	67.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298675427|ref|YP_003727177.1|	-	9.8e-16	57.8	0.0	3.4e-15	56.0	0.0	1.8	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|298675427|ref|YP_003727177.1|	-	1.5e-15	57.4	0.0	2.9e-15	56.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.17	gi|298675427|ref|YP_003727177.1|	-	1.3e-11	44.2	0.1	7.6e-11	41.8	0.1	2.2	3	0	0	3	3	3	1	Putative	methyltransferase
MTS	PF05175.14	gi|298675427|ref|YP_003727177.1|	-	1.1e-08	34.8	0.0	1.8e-08	34.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
PCMT	PF01135.19	gi|298675427|ref|YP_003727177.1|	-	1.6e-05	24.8	0.0	2.1e-05	24.4	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_8	PF05148.15	gi|298675427|ref|YP_003727177.1|	-	1.6e-05	24.9	0.0	0.00034	20.5	0.0	2.1	1	1	0	1	1	1	1	Hypothetical	methyltransferase
CMAS	PF02353.20	gi|298675427|ref|YP_003727177.1|	-	1.8e-05	24.2	0.0	3e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_15	PF09445.10	gi|298675427|ref|YP_003727177.1|	-	9.3e-05	22.1	0.1	0.00018	21.1	0.1	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_9	PF08003.11	gi|298675427|ref|YP_003727177.1|	-	0.00022	20.2	0.0	0.00038	19.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
Methyltransf_2	PF00891.18	gi|298675427|ref|YP_003727177.1|	-	0.00028	20.3	0.0	0.00076	18.8	0.0	1.7	1	1	1	2	2	2	1	O-methyltransferase	domain
Methyltransf_18	PF12847.7	gi|298675427|ref|YP_003727177.1|	-	0.00032	20.7	0.0	0.00053	19.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
DREV	PF05219.12	gi|298675427|ref|YP_003727177.1|	-	0.00051	19.2	0.0	0.00087	18.5	0.0	1.3	1	0	0	1	1	1	1	DREV	methyltransferase
Methyltransf_32	PF13679.6	gi|298675427|ref|YP_003727177.1|	-	0.00072	19.6	0.0	0.00099	19.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
N2227	PF07942.12	gi|298675427|ref|YP_003727177.1|	-	0.0016	17.7	0.2	0.062	12.5	0.1	2.2	1	1	1	2	2	2	1	N2227-like	protein
NodS	PF05401.11	gi|298675427|ref|YP_003727177.1|	-	0.0035	17.0	0.0	0.0052	16.4	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
MetW	PF07021.12	gi|298675427|ref|YP_003727177.1|	-	0.0035	17.0	0.0	0.0069	16.0	0.0	1.5	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
N6_Mtase	PF02384.16	gi|298675427|ref|YP_003727177.1|	-	0.0045	16.3	0.1	0.0078	15.5	0.1	1.3	1	0	0	1	1	1	1	N-6	DNA	Methylase
DOT1	PF08123.13	gi|298675427|ref|YP_003727177.1|	-	0.0047	16.5	0.0	0.009	15.6	0.0	1.5	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
RrnaAD	PF00398.20	gi|298675427|ref|YP_003727177.1|	-	0.0093	15.1	0.0	0.014	14.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
PrmA	PF06325.13	gi|298675427|ref|YP_003727177.1|	-	0.012	15.1	0.0	0.02	14.3	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltr_RsmB-F	PF01189.17	gi|298675427|ref|YP_003727177.1|	-	0.036	13.7	0.0	0.052	13.2	0.0	1.2	1	0	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
UPF0020	PF01170.18	gi|298675427|ref|YP_003727177.1|	-	0.044	13.5	0.0	0.09	12.4	0.0	1.5	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_29	PF03141.16	gi|298675427|ref|YP_003727177.1|	-	0.074	11.6	0.0	0.11	11.0	0.0	1.3	1	0	0	1	1	1	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
FmrO	PF07091.11	gi|298675427|ref|YP_003727177.1|	-	0.22	11.1	0.0	0.3	10.6	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
Metallophos_2	PF12850.7	gi|298675428|ref|YP_003727178.1|	-	3.5e-27	95.6	0.1	3.9e-27	95.5	0.1	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|298675428|ref|YP_003727178.1|	-	8.8e-06	26.4	3.7	0.00019	22.0	0.4	2.1	1	1	1	2	2	2	2	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.6	gi|298675428|ref|YP_003727178.1|	-	0.00058	19.3	0.2	0.34	10.2	0.0	2.2	1	1	1	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
Macro	PF01661.21	gi|298675429|ref|YP_003727179.1|	-	3.5e-45	152.9	0.2	4.6e-45	152.5	0.2	1.2	1	0	0	1	1	1	1	Macro	domain
CCG	PF02754.16	gi|298675430|ref|YP_003727180.1|	-	5.6e-21	74.6	1.4	7.4e-14	51.7	0.0	2.6	3	0	0	3	3	3	2	Cysteine-rich	domain
Fer4_16	PF13484.6	gi|298675430|ref|YP_003727180.1|	-	6e-09	36.7	4.8	1.7e-08	35.2	4.8	1.9	1	0	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.6	gi|298675430|ref|YP_003727180.1|	-	1e-08	35.5	2.7	1e-08	35.5	2.7	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675430|ref|YP_003727180.1|	-	4e-08	33.2	8.3	0.00047	20.2	0.7	3.8	4	0	0	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675430|ref|YP_003727180.1|	-	7.9e-07	29.6	4.2	3.4e-06	27.6	4.2	2.2	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298675430|ref|YP_003727180.1|	-	5.6e-06	26.8	2.1	5.6e-06	26.8	2.1	2.6	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298675430|ref|YP_003727180.1|	-	0.00027	20.6	19.5	0.0085	15.9	4.3	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|298675430|ref|YP_003727180.1|	-	0.00067	19.8	9.4	0.11	12.7	0.4	2.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298675430|ref|YP_003727180.1|	-	0.00081	19.5	9.1	0.013	15.6	1.6	3.2	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298675430|ref|YP_003727180.1|	-	0.01	16.4	5.2	0.04	14.4	1.5	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|298675430|ref|YP_003727180.1|	-	0.024	15.1	2.4	0.024	15.1	2.4	4.0	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298675430|ref|YP_003727180.1|	-	0.11	12.6	17.3	0.066	13.4	11.0	3.3	3	1	2	5	5	5	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675430|ref|YP_003727180.1|	-	0.39	10.9	18.0	0.18	12.0	2.0	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298675430|ref|YP_003727180.1|	-	2.2	8.5	18.9	0.13	12.4	3.6	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|298675430|ref|YP_003727180.1|	-	9.3	7.2	9.0	28	5.6	1.4	2.9	2	1	2	4	4	3	0	4Fe-4S	dicluster	domain
PK	PF00224.21	gi|298675431|ref|YP_003727181.1|	-	4.2e-121	404.1	4.8	5.9e-121	403.6	4.8	1.2	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.16	gi|298675431|ref|YP_003727181.1|	-	1.1e-21	77.2	0.0	4.3e-21	75.3	0.0	2.0	2	1	0	2	2	2	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.14	gi|298675431|ref|YP_003727181.1|	-	0.00015	21.0	1.3	0.00055	19.1	1.3	1.9	1	1	1	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
PcrB	PF01884.17	gi|298675431|ref|YP_003727181.1|	-	0.062	12.7	2.2	0.24	10.8	0.2	2.5	1	1	1	2	2	2	0	PcrB	family
IMPDH	PF00478.25	gi|298675431|ref|YP_003727181.1|	-	0.082	11.9	0.3	0.76	8.7	0.0	2.4	2	1	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
HATPase_c	PF02518.26	gi|298675432|ref|YP_003727182.1|	-	8.5e-31	106.8	0.0	2.3e-30	105.4	0.0	1.8	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
dCache_1	PF02743.18	gi|298675432|ref|YP_003727182.1|	-	2.3e-27	96.4	3.7	2.3e-27	96.4	3.7	2.3	2	0	0	2	2	2	1	Cache	domain
HisKA	PF00512.25	gi|298675432|ref|YP_003727182.1|	-	2.1e-19	69.3	3.0	4.5e-19	68.3	0.1	2.8	3	0	0	3	3	2	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_3	PF08447.12	gi|298675432|ref|YP_003727182.1|	-	2.6e-18	66.1	0.0	6.2e-18	64.9	0.0	1.7	1	0	0	1	1	1	1	PAS	fold
PAS	PF00989.25	gi|298675432|ref|YP_003727182.1|	-	2e-06	27.8	0.0	2.2e-05	24.4	0.0	2.5	2	0	0	2	2	2	1	PAS	fold
PAS_9	PF13426.7	gi|298675432|ref|YP_003727182.1|	-	2.8e-06	27.5	0.3	1.1e-05	25.6	0.3	2.1	1	0	0	1	1	1	1	PAS	domain
HATPase_c_3	PF13589.6	gi|298675432|ref|YP_003727182.1|	-	2.6e-05	24.0	0.0	0.00016	21.5	0.0	2.3	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HAMP	PF00672.25	gi|298675432|ref|YP_003727182.1|	-	2.9e-05	24.4	0.0	0.29	11.6	0.0	3.5	3	0	0	3	3	3	1	HAMP	domain
Bromodomain	PF00439.25	gi|298675432|ref|YP_003727182.1|	-	0.00057	19.9	1.7	0.0039	17.2	0.5	2.7	2	0	0	2	2	2	1	Bromodomain
HATPase_c_2	PF13581.6	gi|298675432|ref|YP_003727182.1|	-	0.0006	19.8	0.0	0.0014	18.6	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
DUF3333	PF11812.8	gi|298675432|ref|YP_003727182.1|	-	0.0026	18.0	0.7	0.007	16.6	0.7	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3333)
PAS_4	PF08448.10	gi|298675432|ref|YP_003727182.1|	-	0.012	15.8	0.0	0.022	15.0	0.0	1.4	1	0	0	1	1	1	0	PAS	fold
dCache_2	PF08269.11	gi|298675432|ref|YP_003727182.1|	-	0.016	14.4	0.1	0.016	14.4	0.1	3.8	5	1	0	5	5	5	0	Cache	domain
HATPase_c_5	PF14501.6	gi|298675432|ref|YP_003727182.1|	-	0.023	14.6	0.5	0.14	12.1	0.0	2.5	2	0	0	2	2	2	0	GHKL	domain
Spc7	PF08317.11	gi|298675432|ref|YP_003727182.1|	-	0.037	12.9	2.1	2.8	6.7	0.2	2.6	2	0	0	2	2	2	0	Spc7	kinetochore	protein
sCache_2	PF17200.4	gi|298675432|ref|YP_003727182.1|	-	0.057	13.3	0.0	0.17	11.7	0.0	1.8	1	0	0	1	1	1	0	Single	Cache	domain	2
Occludin_ELL	PF07303.13	gi|298675432|ref|YP_003727182.1|	-	0.28	11.9	3.2	3.2	8.5	0.2	2.9	2	0	0	2	2	2	0	Occludin	homology	domain
DNA_repr_REX1B	PF14966.6	gi|298675432|ref|YP_003727182.1|	-	0.51	11.0	5.3	0.25	12.0	0.6	3.0	3	1	1	4	4	3	0	DNA	repair	REX1-B
CREPT	PF16566.5	gi|298675432|ref|YP_003727182.1|	-	1.2	9.3	8.9	0.42	10.8	0.1	3.3	3	1	0	3	3	3	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
PAH	PF02671.21	gi|298675432|ref|YP_003727182.1|	-	6.8	6.9	5.4	5.8	7.1	0.1	3.5	5	0	0	5	5	4	0	Paired	amphipathic	helix	repeat
PMSR	PF01625.21	gi|298675433|ref|YP_003727183.1|	-	6.5e-68	227.7	1.8	7.2e-68	227.6	1.8	1.0	1	0	0	1	1	1	1	Peptide	methionine	sulfoxide	reductase
Diphthami_syn_2	PF01902.17	gi|298675434|ref|YP_003727184.1|	-	2.3e-69	233.2	1.8	2.6e-69	233.1	1.8	1.0	1	0	0	1	1	1	1	Diphthamide	synthase
PFO_beta_C	PF12367.8	gi|298675434|ref|YP_003727184.1|	-	0.025	14.7	0.1	0.28	11.3	0.1	2.4	2	0	0	2	2	2	0	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
Proteasome	PF00227.26	gi|298675434|ref|YP_003727184.1|	-	0.088	12.3	0.1	0.23	10.9	0.0	1.7	2	0	0	2	2	2	0	Proteasome	subunit
tRNA_Me_trans	PF03054.16	gi|298675434|ref|YP_003727184.1|	-	0.092	11.5	0.0	0.18	10.6	0.0	1.6	1	0	0	1	1	1	0	tRNA	methyl	transferase
ThiI	PF02568.14	gi|298675434|ref|YP_003727184.1|	-	0.11	12.1	0.0	2.3	7.8	0.0	2.1	1	1	1	2	2	2	0	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.21	gi|298675435|ref|YP_003727185.1|	-	3.9e-46	158.3	0.0	3.6e-28	99.2	0.0	2.3	1	1	1	2	2	2	2	Asparagine	synthase
GATase_7	PF13537.6	gi|298675435|ref|YP_003727185.1|	-	3.4e-12	46.3	0.0	6.7e-12	45.4	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.6	gi|298675435|ref|YP_003727185.1|	-	2e-05	24.8	0.0	4.1e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
NAD_synthase	PF02540.17	gi|298675435|ref|YP_003727185.1|	-	0.00087	18.5	0.2	0.0086	15.2	0.0	2.3	1	1	0	2	2	2	1	NAD	synthase
ATP_bind_3	PF01171.20	gi|298675435|ref|YP_003727185.1|	-	0.004	16.9	0.0	0.0097	15.7	0.0	1.6	1	0	0	1	1	1	1	PP-loop	family
tRNA_Me_trans	PF03054.16	gi|298675435|ref|YP_003727185.1|	-	0.009	14.8	0.0	0.015	14.1	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
QueC	PF06508.13	gi|298675435|ref|YP_003727185.1|	-	0.023	14.2	0.0	0.041	13.4	0.0	1.5	1	0	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
RQC	PF09382.10	gi|298675436|ref|YP_003727186.1|	-	1.8e-32	111.5	0.2	3.3e-32	110.6	0.2	1.4	1	0	0	1	1	1	1	RQC	domain
Helicase_C	PF00271.31	gi|298675436|ref|YP_003727186.1|	-	1.3e-23	83.4	0.1	3.4e-20	72.4	0.0	2.9	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|298675436|ref|YP_003727186.1|	-	5.7e-23	81.6	0.0	1e-21	77.5	0.0	2.2	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
HRDC	PF00570.23	gi|298675436|ref|YP_003727186.1|	-	8.9e-21	73.7	0.0	1.6e-20	72.8	0.0	1.5	1	0	0	1	1	1	1	HRDC	domain
RecQ_Zn_bind	PF16124.5	gi|298675436|ref|YP_003727186.1|	-	1.4e-17	64.2	3.6	1.4e-17	64.2	3.6	3.3	4	1	1	5	5	5	1	RecQ	zinc-binding
ResIII	PF04851.15	gi|298675436|ref|YP_003727186.1|	-	1.7e-06	28.1	0.1	1.4e-05	25.2	0.0	2.3	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.23	gi|298675436|ref|YP_003727186.1|	-	0.00021	20.2	0.0	0.00035	19.4	0.0	1.3	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_Sgs1	PF11408.8	gi|298675436|ref|YP_003727186.1|	-	0.00087	19.3	0.0	0.0029	17.6	0.0	1.8	1	0	0	1	1	1	1	Sgs1	RecQ	helicase
DUF573	PF04504.14	gi|298675436|ref|YP_003727186.1|	-	0.012	16.3	2.6	0.074	13.7	0.4	2.9	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF573
HHH	PF00633.23	gi|298675436|ref|YP_003727186.1|	-	0.044	13.7	0.0	0.11	12.4	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
GMP_synt_C	PF00958.22	gi|298675437|ref|YP_003727187.1|	-	5.4e-31	106.5	0.0	1.5e-30	105.1	0.0	1.8	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.17	gi|298675437|ref|YP_003727187.1|	-	2e-10	40.2	0.2	1.3e-09	37.6	0.2	2.0	1	1	0	1	1	1	1	NAD	synthase
QueC	PF06508.13	gi|298675437|ref|YP_003727187.1|	-	2.8e-05	23.7	0.0	0.00029	20.4	0.0	2.1	1	1	1	2	2	2	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|298675437|ref|YP_003727187.1|	-	8.4e-05	21.5	0.0	0.0084	14.9	0.0	2.1	2	0	0	2	2	2	2	tRNA	methyl	transferase
ThiI	PF02568.14	gi|298675437|ref|YP_003727187.1|	-	0.0015	18.1	0.0	0.0047	16.5	0.0	1.8	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
ATP_bind_3	PF01171.20	gi|298675437|ref|YP_003727187.1|	-	0.0037	17.0	0.0	0.0057	16.4	0.0	1.4	1	0	0	1	1	1	1	PP-loop	family
Arginosuc_synth	PF00764.19	gi|298675437|ref|YP_003727187.1|	-	0.015	14.6	0.2	0.069	12.4	0.0	1.9	2	0	0	2	2	2	0	Arginosuccinate	synthase
DinI	PF06183.13	gi|298675437|ref|YP_003727187.1|	-	0.036	14.4	0.2	0.13	12.6	0.1	1.9	2	0	0	2	2	2	0	DinI-like	family
PAPS_reduct	PF01507.19	gi|298675437|ref|YP_003727187.1|	-	0.04	14.0	0.0	0.14	12.2	0.0	1.8	2	0	0	2	2	2	0	Phosphoadenosine	phosphosulfate	reductase	family
DUF5388	PF17363.2	gi|298675437|ref|YP_003727187.1|	-	0.12	12.6	0.0	0.31	11.3	0.0	1.6	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5388)
Radical_SAM	PF04055.21	gi|298675438|ref|YP_003727188.1|	-	0.0024	18.3	0.1	0.017	15.5	0.1	2.2	1	1	0	1	1	1	1	Radical	SAM	superfamily
Radical_SAM_C	PF16199.5	gi|298675438|ref|YP_003727188.1|	-	0.022	14.8	0.0	0.41	10.7	0.0	2.3	2	0	0	2	2	2	0	Radical_SAM	C-terminal	domain
Snf7	PF03357.21	gi|298675438|ref|YP_003727188.1|	-	0.11	12.1	0.5	0.26	10.9	0.2	1.6	2	0	0	2	2	2	0	Snf7
AA_kinase	PF00696.28	gi|298675439|ref|YP_003727189.1|	-	4.3e-47	160.7	4.9	4.9e-47	160.5	4.9	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
CagD	PF16567.5	gi|298675439|ref|YP_003727189.1|	-	0.14	11.9	1.1	0.18	11.5	0.1	1.6	2	0	0	2	2	2	0	Pathogenicity	island	component	CagD
MC1	PF05854.11	gi|298675440|ref|YP_003727190.1|	-	1.5e-40	137.3	2.4	1.8e-40	137.2	2.4	1.0	1	0	0	1	1	1	1	Non-histone	chromosomal	protein	MC1
GCHY-1	PF02649.14	gi|298675441|ref|YP_003727191.1|	-	9.7e-83	277.6	4.1	1.1e-82	277.5	4.1	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
DREPP	PF05558.12	gi|298675441|ref|YP_003727191.1|	-	0.0038	17.1	0.1	0.044	13.7	0.1	2.3	2	0	0	2	2	2	1	DREPP	plasma	membrane	polypeptide
DUF577	PF04510.12	gi|298675441|ref|YP_003727191.1|	-	0.043	13.7	0.9	8.1	6.3	0.0	2.4	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF577)
CDC37_C	PF08564.10	gi|298675441|ref|YP_003727191.1|	-	0.52	10.5	0.0	0.52	10.5	0.0	2.6	3	0	0	3	3	3	0	Cdc37	C	terminal	domain
Zn-ribbon_8	PF09723.10	gi|298675442|ref|YP_003727192.1|	-	5.7e-05	23.1	1.5	5.7e-05	23.1	1.5	1.9	2	0	0	2	2	2	1	Zinc	ribbon	domain
DZR	PF12773.7	gi|298675442|ref|YP_003727192.1|	-	0.00018	21.4	3.3	0.00031	20.7	3.3	1.4	1	1	0	1	1	1	1	Double	zinc	ribbon
HypA	PF01155.19	gi|298675442|ref|YP_003727192.1|	-	0.0043	17.1	2.6	0.0043	17.1	2.6	1.4	1	1	1	2	2	2	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
TackOD1	PF18551.1	gi|298675442|ref|YP_003727192.1|	-	0.0054	16.4	5.2	0.0056	16.4	5.2	1.1	1	0	0	1	1	1	1	Thaumarchaeal	output	domain	1
zf-C3HC4_3	PF13920.6	gi|298675442|ref|YP_003727192.1|	-	0.0061	16.4	0.9	0.0061	16.4	0.9	1.5	2	0	0	2	2	2	1	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_9	PF14369.6	gi|298675442|ref|YP_003727192.1|	-	0.01	16.1	1.8	1.8	8.9	0.3	2.2	2	0	0	2	2	2	0	zinc-ribbon
TFIIS_C	PF01096.18	gi|298675442|ref|YP_003727192.1|	-	0.02	14.8	8.6	0.23	11.3	0.2	2.6	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
zf-RING_5	PF14634.6	gi|298675442|ref|YP_003727192.1|	-	0.02	14.9	2.1	0.02	14.9	2.1	1.5	2	0	0	2	2	2	0	zinc-RING	finger	domain
Zn_Tnp_IS1	PF03811.13	gi|298675442|ref|YP_003727192.1|	-	0.024	14.4	2.4	0.044	13.5	0.2	2.1	2	0	0	2	2	2	0	InsA	N-terminal	domain
DNA_RNApol_7kD	PF03604.13	gi|298675442|ref|YP_003727192.1|	-	0.027	14.1	2.7	0.027	14.1	2.7	1.8	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn_Tnp_IS1595	PF12760.7	gi|298675442|ref|YP_003727192.1|	-	0.033	14.2	2.0	2.3	8.2	0.1	2.1	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
CcmH	PF03918.14	gi|298675442|ref|YP_003727192.1|	-	0.038	13.3	0.3	0.038	13.3	0.3	1.1	1	0	0	1	1	1	0	Cytochrome	C	biogenesis	protein
ADK_lid	PF05191.14	gi|298675442|ref|YP_003727192.1|	-	0.038	14.0	2.8	0.038	14.0	2.8	2.0	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-ribbon_3	PF13248.6	gi|298675442|ref|YP_003727192.1|	-	0.08	12.4	5.8	0.12	11.8	0.6	2.7	3	0	0	3	3	3	0	zinc-ribbon	domain
FYDLN_acid	PF09538.10	gi|298675442|ref|YP_003727192.1|	-	0.15	12.8	3.9	0.17	12.6	3.2	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
zinc_ribbon_4	PF13717.6	gi|298675442|ref|YP_003727192.1|	-	0.16	11.9	8.0	2.5	8.1	4.7	2.8	1	1	1	2	2	2	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|298675442|ref|YP_003727192.1|	-	0.19	11.3	10.3	0.9	9.1	0.8	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
PHD	PF00628.29	gi|298675442|ref|YP_003727192.1|	-	0.28	11.1	6.6	0.7	9.8	2.5	2.5	2	1	0	2	2	2	0	PHD-finger
Rubredoxin	PF00301.20	gi|298675442|ref|YP_003727192.1|	-	0.33	11.0	7.1	31	4.7	7.1	2.8	1	1	0	1	1	1	0	Rubredoxin
zf-Sec23_Sec24	PF04810.15	gi|298675442|ref|YP_003727192.1|	-	0.56	10.3	5.6	1.4	9.0	0.6	2.2	1	1	1	2	2	2	0	Sec23/Sec24	zinc	finger
Rubredoxin_2	PF18073.1	gi|298675442|ref|YP_003727192.1|	-	3	7.6	8.8	6.8	6.5	0.2	2.6	3	0	0	3	3	3	0	Rubredoxin	metal	binding	domain
Prim_Zn_Ribbon	PF08273.12	gi|298675442|ref|YP_003727192.1|	-	8.3	6.8	9.7	7.3	7.0	0.3	2.6	1	1	2	3	3	3	0	Zinc-binding	domain	of	primase-helicase
DUF2098	PF09871.9	gi|298675444|ref|YP_003727194.1|	-	4.8e-20	71.7	0.5	6.3e-20	71.3	0.5	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2098)
NTP_transf_2	PF01909.23	gi|298675445|ref|YP_003727195.1|	-	0.00022	21.4	0.4	0.00053	20.2	0.1	1.8	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
DUF5041	PF16444.5	gi|298675445|ref|YP_003727195.1|	-	0.057	13.7	0.0	0.11	12.8	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5041)
H_PPase	PF03030.16	gi|298675446|ref|YP_003727196.1|	-	2.6e-266	885.4	52.3	3e-266	885.2	52.3	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
DUF4346	PF14251.6	gi|298675448|ref|YP_003727198.1|	-	2.8e-09	37.0	0.1	1.2e-08	35.0	0.1	2.0	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4346)
Pterin_bind	PF00809.22	gi|298675448|ref|YP_003727198.1|	-	1.2e-07	31.6	3.0	3.4e-07	30.2	2.9	1.8	1	1	0	1	1	1	1	Pterin	binding	enzyme
CdhD	PF03599.16	gi|298675448|ref|YP_003727198.1|	-	0.00014	20.7	0.7	0.00034	19.5	0.2	1.8	2	0	0	2	2	2	1	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
DUF4990	PF16380.5	gi|298675448|ref|YP_003727198.1|	-	0.013	15.6	0.0	0.031	14.4	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function
ACT_6	PF13740.6	gi|298675448|ref|YP_003727198.1|	-	0.16	12.0	2.6	8.1	6.5	0.1	3.3	3	0	0	3	3	3	0	ACT	domain
Tubulin	PF00091.25	gi|298675449|ref|YP_003727199.1|	-	2.5e-37	129.0	0.2	4.6e-37	128.1	0.2	1.4	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|298675449|ref|YP_003727199.1|	-	9e-33	112.4	0.3	3.3e-32	110.6	0.0	2.2	3	0	0	3	3	3	1	FtsZ	family,	C-terminal	domain
Tubulin_2	PF13809.6	gi|298675449|ref|YP_003727199.1|	-	7.6	5.6	7.5	8.5	5.4	2.9	2.3	1	1	1	2	2	2	0	Tubulin	like
Prok-JAB	PF14464.6	gi|298675450|ref|YP_003727200.1|	-	6.3e-10	38.8	0.0	1e-09	38.2	0.0	1.3	1	1	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
RadC	PF04002.15	gi|298675450|ref|YP_003727200.1|	-	0.0003	20.8	0.2	0.00048	20.1	0.2	1.4	1	1	0	1	1	1	1	RadC-like	JAB	domain
DUF2099	PF09872.9	gi|298675451|ref|YP_003727201.1|	-	1.9e-112	374.6	1.7	2.2e-112	374.4	1.7	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2099)
Ribosom_S30AE_C	PF16321.5	gi|298675451|ref|YP_003727201.1|	-	0.23	11.2	0.2	0.23	11.2	0.2	1.6	2	0	0	2	2	2	0	Sigma	54	modulation/S30EA	ribosomal	protein	C	terminus
AMP-binding_C_2	PF14535.6	gi|298675452|ref|YP_003727202.1|	-	9.9e-29	99.5	0.8	2.9e-28	98.0	0.8	1.8	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.28	gi|298675452|ref|YP_003727202.1|	-	2.2e-16	59.5	0.2	2.5e-15	56.0	0.2	2.0	1	1	0	1	1	1	1	AMP-binding	enzyme
GH3	PF03321.13	gi|298675452|ref|YP_003727202.1|	-	0.0002	20.4	0.1	0.021	13.7	0.0	2.1	2	0	0	2	2	2	2	GH3	auxin-responsive	promoter
LuxE	PF04443.12	gi|298675452|ref|YP_003727202.1|	-	0.012	14.6	0.0	0.14	11.2	0.0	2.1	2	0	0	2	2	2	0	Acyl-protein	synthetase,	LuxE
OrfB_Zn_ribbon	PF07282.11	gi|298675453|ref|YP_003727203.1|	-	1e-18	67.0	0.2	2.4e-18	65.8	0.2	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675453|ref|YP_003727203.1|	-	4.8e-13	49.4	2.1	9.1e-13	48.5	2.1	1.5	1	0	0	1	1	1	1	Probable	transposase
HTH_OrfB_IS605	PF12323.8	gi|298675453|ref|YP_003727203.1|	-	2.5e-06	26.9	0.1	4.9e-06	25.9	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Exo_endo_phos_2	PF14529.6	gi|298675453|ref|YP_003727203.1|	-	0.047	13.5	0.3	0.14	12.0	0.3	1.8	1	0	0	1	1	1	0	Endonuclease-reverse	transcriptase
DUF5048	PF16467.5	gi|298675453|ref|YP_003727203.1|	-	0.12	12.6	2.0	1.6	9.0	0.1	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5048)
Peptidase_M1	PF01433.20	gi|298675454|ref|YP_003727204.1|	-	2.5e-07	30.5	1.8	2.5e-07	30.5	1.8	2.4	3	0	0	3	3	3	1	Peptidase	family	M1	domain
HARP	PF07443.13	gi|298675454|ref|YP_003727204.1|	-	0.0028	17.2	2.8	0.033	13.8	0.1	3.2	3	0	0	3	3	3	1	HepA-related	protein	(HARP)
HTH_45	PF14947.6	gi|298675455|ref|YP_003727205.1|	-	1.1e-23	83.0	3.0	1.3e-23	82.8	3.0	1.0	1	0	0	1	1	1	1	Winged	helix-turn-helix
Exosortase_EpsH	PF09721.10	gi|298675457|ref|YP_003727207.1|	-	8.4e-13	48.4	9.2	1.1e-12	48.1	9.2	1.1	1	0	0	1	1	1	1	Transmembrane	exosortase	(Exosortase_EpsH)
DUF11	PF01345.18	gi|298675458|ref|YP_003727208.1|	-	0.0073	16.6	11.3	0.41	11.0	0.7	3.2	2	1	0	2	2	2	2	Domain	of	unknown	function	DUF11
CARDB	PF07705.11	gi|298675458|ref|YP_003727208.1|	-	0.011	16.0	6.6	0.43	10.9	1.0	2.9	2	0	0	2	2	2	0	CARDB
NPCBM_assoc	PF10633.9	gi|298675458|ref|YP_003727208.1|	-	0.076	13.3	1.2	13	6.1	0.1	2.9	2	0	0	2	2	2	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
DUF1573	PF07610.11	gi|298675458|ref|YP_003727208.1|	-	0.097	12.7	0.2	9.1	6.4	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1573)
Big_6	PF17936.1	gi|298675460|ref|YP_003727210.1|	-	0.00039	20.7	0.6	0.39	11.0	0.1	3.5	3	1	0	3	3	3	2	Bacterial	Ig	domain
Big_3_5	PF16640.5	gi|298675460|ref|YP_003727210.1|	-	0.006	16.7	0.3	31	4.8	0.0	3.6	3	0	0	3	3	3	1	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|298675460|ref|YP_003727210.1|	-	0.85	9.9	4.7	15	6.0	0.1	3.2	4	0	0	4	4	4	0	Carboxypeptidase	regulatory-like	domain
HTH_45	PF14947.6	gi|298675461|ref|YP_003727211.1|	-	2.4e-24	85.1	0.9	2.7e-24	84.9	0.9	1.0	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4393	PF14337.6	gi|298675461|ref|YP_003727211.1|	-	0.015	15.1	0.1	0.016	15.0	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
HTH_27	PF13463.6	gi|298675461|ref|YP_003727211.1|	-	0.022	15.2	0.1	0.24	11.9	0.0	2.0	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF4364	PF14277.6	gi|298675461|ref|YP_003727211.1|	-	0.042	13.6	0.1	0.046	13.5	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
DUF4423	PF14394.6	gi|298675461|ref|YP_003727211.1|	-	0.046	13.4	0.1	0.4	10.4	0.0	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
Hyphal_reg_CWP	PF11765.8	gi|298675461|ref|YP_003727211.1|	-	0.048	12.6	0.1	0.36	9.7	0.0	1.8	1	1	1	2	2	2	0	Hyphally	regulated	cell	wall	protein	N-terminal
HemN_C	PF06969.16	gi|298675461|ref|YP_003727211.1|	-	0.085	12.9	0.0	0.15	12.2	0.0	1.4	1	0	0	1	1	1	0	HemN	C-terminal	domain
MotA_activ	PF09114.10	gi|298675461|ref|YP_003727211.1|	-	0.085	13.0	0.0	0.12	12.6	0.0	1.4	1	1	0	1	1	1	0	Transcription	factor	MotA,	activation	domain
DUF4366	PF14283.6	gi|298675462|ref|YP_003727212.1|	-	0.0014	18.7	1.3	0.0021	18.1	0.6	1.8	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4366)
DARPP-32	PF05395.12	gi|298675462|ref|YP_003727212.1|	-	0.22	11.7	0.0	0.22	11.7	0.0	2.3	1	1	1	2	2	2	0	Protein	phosphatase	inhibitor	1/DARPP-32
Zip	PF02535.22	gi|298675462|ref|YP_003727212.1|	-	0.39	9.9	1.1	0.56	9.4	1.1	1.2	1	0	0	1	1	1	0	ZIP	Zinc	transporter
Podoplanin	PF05808.11	gi|298675462|ref|YP_003727212.1|	-	0.88	9.7	12.9	0.83	9.7	11.6	1.6	1	1	0	1	1	1	0	Podoplanin
Macoilin	PF09726.9	gi|298675462|ref|YP_003727212.1|	-	2	6.8	3.6	2.1	6.8	3.6	1.1	1	0	0	1	1	1	0	Macoilin	family
bMG10	PF17973.1	gi|298675463|ref|YP_003727213.1|	-	5e-21	75.3	2.3	5.5e-05	23.4	0.0	4.5	4	1	0	4	4	4	3	Bacterial	Alpha-2-macroglobulin	MG10	domain
DUF11	PF01345.18	gi|298675463|ref|YP_003727213.1|	-	5.7e-09	36.2	21.8	0.008	16.5	1.1	5.2	3	2	0	4	4	4	3	Domain	of	unknown	function	DUF11
CtaG_Cox11	PF04442.14	gi|298675463|ref|YP_003727213.1|	-	1.8e-06	28.0	0.0	0.69	9.9	0.0	3.5	3	0	0	3	3	3	2	Cytochrome	c	oxidase	assembly	protein	CtaG/Cox11
CDC48_2	PF02933.17	gi|298675463|ref|YP_003727213.1|	-	1.8e-06	27.6	0.0	2	8.3	0.0	3.7	3	0	0	3	3	3	3	Cell	division	protein	48	(CDC48),	domain	2
Cohesin	PF00963.18	gi|298675463|ref|YP_003727213.1|	-	8.3e-06	26.1	7.9	1.5	9.1	0.1	4.8	4	0	0	4	4	4	3	Cohesin	domain
Arrestin_C	PF02752.22	gi|298675463|ref|YP_003727213.1|	-	2e-05	25.1	0.2	5.5	7.4	0.0	3.8	3	0	0	3	3	3	2	Arrestin	(or	S-antigen),	C-terminal	domain
BatD	PF13584.6	gi|298675463|ref|YP_003727213.1|	-	6.2e-05	22.0	16.3	0.013	14.3	3.9	3.8	2	2	2	4	4	4	2	Oxygen	tolerance
Peptidase_A4	PF01828.17	gi|298675463|ref|YP_003727213.1|	-	0.00013	21.5	22.9	0.11	11.9	9.6	3.7	1	1	2	3	3	3	3	Peptidase	A4	family
DUF4784	PF16023.5	gi|298675463|ref|YP_003727213.1|	-	0.00071	18.6	1.7	3.7	6.4	0.1	3.3	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4784)
DUF4334	PF14232.6	gi|298675463|ref|YP_003727213.1|	-	0.01	15.8	0.5	24	5.0	0.0	3.9	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4334)
NPCBM_assoc	PF10633.9	gi|298675463|ref|YP_003727213.1|	-	0.011	15.9	10.8	8	6.8	0.4	6.7	6	1	1	7	7	7	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
Big_8	PF17961.1	gi|298675463|ref|YP_003727213.1|	-	0.011	15.8	8.4	7.3	6.8	0.1	4.5	4	1	0	4	4	4	0	Bacterial	Ig	domain
WYL	PF13280.6	gi|298675463|ref|YP_003727213.1|	-	0.021	14.9	0.0	11	6.0	0.0	3.7	4	0	0	4	4	4	0	WYL	domain
Cupredoxin_1	PF13473.6	gi|298675463|ref|YP_003727213.1|	-	0.023	14.8	0.7	1.2	9.3	0.2	3.7	2	1	1	3	3	3	0	Cupredoxin-like	domain
MipZ	PF09140.11	gi|298675463|ref|YP_003727213.1|	-	0.027	13.8	0.0	20	4.4	0.0	3.0	3	0	0	3	3	3	0	ATPase	MipZ
Rtt106	PF08512.12	gi|298675463|ref|YP_003727213.1|	-	0.055	13.9	0.0	35	4.9	0.0	3.3	3	0	0	3	3	3	0	Histone	chaperone	Rttp106-like
MYEOV2	PF15004.6	gi|298675463|ref|YP_003727213.1|	-	0.071	13.5	0.3	13	6.3	0.0	4.0	4	0	0	4	4	4	0	Myeloma-overexpressed-like
DUF4307	PF14155.6	gi|298675463|ref|YP_003727213.1|	-	0.18	11.7	0.1	0.18	11.7	0.1	5.3	5	2	2	7	7	7	0	Domain	of	unknown	function	(DUF4307)
Big_3	PF07523.12	gi|298675463|ref|YP_003727213.1|	-	0.18	12.1	8.8	9.5	6.6	0.8	4.5	2	1	1	3	3	3	0	Bacterial	Ig-like	domain	(group	3)
fn3_5	PF06280.12	gi|298675463|ref|YP_003727213.1|	-	0.25	12.1	13.9	6.2	7.6	0.3	4.7	4	0	0	4	4	4	0	Fn3-like	domain
LRR_adjacent	PF08191.11	gi|298675463|ref|YP_003727213.1|	-	1.7	8.9	13.5	4.9	7.4	0.4	4.3	4	0	0	4	4	4	0	LRR	adjacent
PilA4	PF18682.1	gi|298675463|ref|YP_003727213.1|	-	3.3	8.2	15.9	8	6.9	0.3	4.4	4	0	0	4	4	4	0	Pilin	A4
PASTA	PF03793.19	gi|298675463|ref|YP_003727213.1|	-	8.5	6.3	7.6	1.1e+02	2.8	0.1	4.1	4	0	0	4	4	4	0	PASTA	domain
SporV_AA	PF12164.8	gi|298675464|ref|YP_003727214.1|	-	0.0017	18.6	1.0	15	6.0	0.0	5.0	6	0	0	6	6	6	1	Stage	V	sporulation	protein	AA
EF-hand_5	PF13202.6	gi|298675464|ref|YP_003727214.1|	-	0.031	13.8	13.6	0.15	11.6	0.0	4.9	5	0	0	5	5	5	0	EF	hand
EF-hand_7	PF13499.6	gi|298675464|ref|YP_003727214.1|	-	0.054	13.9	9.4	0.098	13.1	0.0	4.6	5	0	0	5	5	5	0	EF-hand	domain	pair
EF-hand_1	PF00036.32	gi|298675464|ref|YP_003727214.1|	-	0.29	10.8	0.0	0.29	10.8	0.0	5.6	7	0	0	7	7	7	0	EF	hand
EF-hand_6	PF13405.6	gi|298675464|ref|YP_003727214.1|	-	1.1	9.3	0.0	1.1	9.3	0.0	6.9	9	0	0	9	9	9	0	EF-hand	domain
Pribosyltran	PF00156.27	gi|298675465|ref|YP_003727215.1|	-	2.5e-28	98.6	0.0	3.7e-28	98.0	0.0	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|298675465|ref|YP_003727215.1|	-	5.5e-05	22.7	0.0	7.9e-05	22.2	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|298675465|ref|YP_003727215.1|	-	0.049	13.1	0.0	0.094	12.2	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosyl	transferase
Mur_ligase_C	PF02875.21	gi|298675465|ref|YP_003727215.1|	-	0.17	12.1	0.0	0.49	10.7	0.0	1.7	2	0	0	2	2	2	0	Mur	ligase	family,	glutamate	ligase	domain
DLH	PF01738.18	gi|298675466|ref|YP_003727216.1|	-	8.9e-12	45.0	0.0	1.2e-11	44.6	0.0	1.2	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Hydrolase_4	PF12146.8	gi|298675466|ref|YP_003727216.1|	-	5.9e-09	35.5	0.1	0.031	13.5	0.0	3.0	2	1	1	3	3	3	3	Serine	aminopeptidase,	S33
Abhydrolase_1	PF00561.20	gi|298675466|ref|YP_003727216.1|	-	3.8e-08	33.3	0.2	2.8e-05	23.9	0.3	2.7	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
BAAT_C	PF08840.11	gi|298675466|ref|YP_003727216.1|	-	9.2e-07	29.0	0.0	0.00015	21.7	0.0	2.2	1	1	1	2	2	2	2	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Peptidase_S9	PF00326.21	gi|298675466|ref|YP_003727216.1|	-	3e-05	23.6	0.0	0.14	11.6	0.1	2.4	1	1	1	2	2	2	2	Prolyl	oligopeptidase	family
Abhydrolase_6	PF12697.7	gi|298675466|ref|YP_003727216.1|	-	0.00057	20.6	0.0	0.0034	18.0	0.0	1.8	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.18	gi|298675466|ref|YP_003727216.1|	-	0.0023	17.6	0.1	0.014	15.0	0.1	1.9	1	1	1	2	2	2	1	X-Pro	dipeptidyl-peptidase	(S15	family)
DUF3530	PF12048.8	gi|298675466|ref|YP_003727216.1|	-	0.13	11.7	0.0	0.37	10.2	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3530)
DUF1749	PF08538.10	gi|298675466|ref|YP_003727216.1|	-	0.2	10.7	0.0	0.31	10.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1749)
MetOD1	PF18546.1	gi|298675467|ref|YP_003727217.1|	-	1.2e-32	113.0	0.9	2.1e-32	112.3	0.9	1.3	1	0	0	1	1	1	1	Metanogen	output	domain	1
Response_reg	PF00072.24	gi|298675467|ref|YP_003727217.1|	-	1.1e-24	86.8	0.1	3.2e-24	85.2	0.1	1.8	2	0	0	2	2	2	1	Response	regulator	receiver	domain
ATC_hydrolase	PF14196.6	gi|298675467|ref|YP_003727217.1|	-	0.013	16.3	1.5	0.033	14.9	1.5	1.9	1	1	0	1	1	1	0	L-2-amino-thiazoline-4-carboxylic	acid	hydrolase
DUF3404	PF11884.8	gi|298675468|ref|YP_003727218.1|	-	0.078	12.2	0.2	0.084	12.1	0.2	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3404)
OrfB_IS605	PF01385.19	gi|298675469|ref|YP_003727219.1|	-	2.6e-26	92.2	1.5	5.9e-26	91.0	1.5	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675469|ref|YP_003727219.1|	-	5.1e-24	84.0	0.4	1.1e-23	82.9	0.4	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298675469|ref|YP_003727219.1|	-	1.2e-20	72.7	1.7	2.8e-20	71.5	1.7	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298675469|ref|YP_003727219.1|	-	0.0079	16.3	0.3	0.02	15.1	0.3	1.6	1	0	0	1	1	1	1	Piccolo	Zn-finger
Flagellin_D3	PF08884.11	gi|298675469|ref|YP_003727219.1|	-	0.022	15.1	0.1	0.041	14.3	0.1	1.4	1	0	0	1	1	1	0	Flagellin	D3	domain
LemA	PF04011.12	gi|298675469|ref|YP_003727219.1|	-	0.027	14.3	1.0	0.44	10.4	0.2	2.4	2	1	0	2	2	2	0	LemA	family
Phage_GP20	PF06810.11	gi|298675469|ref|YP_003727219.1|	-	0.13	12.1	4.0	0.83	9.4	1.2	2.4	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
MapZ_EC1	PF18041.1	gi|298675469|ref|YP_003727219.1|	-	0.78	10.0	6.3	0.36	11.1	1.1	2.3	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
SNase	PF00565.17	gi|298675470|ref|YP_003727220.1|	-	4.3e-26	91.5	0.0	5.6e-26	91.1	0.0	1.1	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
DUF5006	PF16397.5	gi|298675470|ref|YP_003727220.1|	-	0.069	12.3	0.1	0.1	11.8	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5006)
DUF1699	PF08004.11	gi|298675471|ref|YP_003727221.1|	-	2e-63	211.9	1.1	2.2e-63	211.7	1.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1699)
MgtE	PF01769.16	gi|298675473|ref|YP_003727223.1|	-	2.4e-19	69.9	12.7	2.4e-19	69.9	12.7	1.9	2	0	0	2	2	2	1	Divalent	cation	transporter
MgtE	PF01769.16	gi|298675474|ref|YP_003727224.1|	-	2.1e-19	70.1	9.3	2.1e-19	70.1	9.3	1.5	2	0	0	2	2	2	1	Divalent	cation	transporter
TrkA_C	PF02080.21	gi|298675475|ref|YP_003727225.1|	-	1.5e-28	98.4	0.0	3.2e-14	52.5	0.0	2.5	2	0	0	2	2	2	2	TrkA-C	domain
PhoU	PF01895.19	gi|298675475|ref|YP_003727225.1|	-	6.7e-18	64.9	12.8	9.1e-10	38.9	7.9	2.4	2	0	0	2	2	2	2	PhoU	domain
PhoU_div	PF01865.16	gi|298675475|ref|YP_003727225.1|	-	0.026	13.8	4.4	0.13	11.6	0.1	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	DUF47
Rib_5-P_isom_A	PF06026.14	gi|298675476|ref|YP_003727226.1|	-	7.1e-64	214.6	0.2	7.1e-64	214.6	0.2	1.3	2	0	0	2	2	2	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.22	gi|298675476|ref|YP_003727226.1|	-	3.4e-05	23.8	0.4	0.0011	18.9	0.1	2.3	2	0	0	2	2	2	1	DeoR	C	terminal	sensor	domain
RNA_pol_Rpb2_7	PF04560.20	gi|298675476|ref|YP_003727226.1|	-	0.14	12.6	0.0	0.32	11.4	0.0	1.6	1	0	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	7
tRNA-synt_2	PF00152.20	gi|298675477|ref|YP_003727227.1|	-	2.1e-91	306.3	0.2	2.6e-91	306.0	0.2	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|298675477|ref|YP_003727227.1|	-	4.7e-16	58.5	0.1	8e-16	57.8	0.1	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|298675477|ref|YP_003727227.1|	-	6.7e-05	22.5	0.9	0.0086	15.6	0.1	2.9	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
Med30	PF11315.8	gi|298675477|ref|YP_003727227.1|	-	0.013	15.7	0.0	0.025	14.8	0.0	1.4	1	0	0	1	1	1	0	Mediator	complex	subunit	30
Asparaginase	PF00710.20	gi|298675478|ref|YP_003727228.1|	-	2e-59	200.4	1.2	3.5e-59	199.6	1.2	1.4	1	0	0	1	1	1	1	Asparaginase,	N-terminal
Asparaginase_C	PF17763.1	gi|298675478|ref|YP_003727228.1|	-	2.5e-32	111.5	0.0	1.9e-30	105.4	0.0	2.4	2	0	0	2	2	2	1	Glutaminase/Asparaginase	C-terminal	domain
GatD_N	PF18195.1	gi|298675478|ref|YP_003727228.1|	-	7.7e-17	60.4	0.3	1.8e-16	59.2	0.3	1.6	1	0	0	1	1	1	1	GatD	N-terminal	domain
Peripla_BP_4	PF13407.6	gi|298675478|ref|YP_003727228.1|	-	4.7e-05	23.1	0.0	0.065	12.8	0.0	2.2	1	1	0	2	2	2	2	Periplasmic	binding	protein	domain
Asp_Glu_race	PF01177.22	gi|298675478|ref|YP_003727228.1|	-	0.02	14.8	0.0	0.043	13.7	0.0	1.6	1	0	0	1	1	1	0	Asp/Glu/Hydantoin	racemase
zf-primase	PF09329.11	gi|298675478|ref|YP_003727228.1|	-	0.091	12.6	0.1	0.2	11.5	0.1	1.5	1	0	0	1	1	1	0	Primase	zinc	finger
Lyase_1	PF00206.20	gi|298675479|ref|YP_003727229.1|	-	5.8e-61	206.6	0.1	1.1e-60	205.6	0.0	1.5	2	0	0	2	2	2	1	Lyase
ASL_C2	PF14698.6	gi|298675479|ref|YP_003727229.1|	-	6.4e-14	52.5	0.0	5.4e-13	49.5	0.0	2.3	2	0	0	2	2	2	1	Argininosuccinate	lyase	C-terminal
PAS	PF00989.25	gi|298675480|ref|YP_003727230.1|	-	1.2e-41	141.3	0.0	4.8e-12	45.9	0.0	4.7	5	0	0	5	5	5	4	PAS	fold
PAS_9	PF13426.7	gi|298675480|ref|YP_003727230.1|	-	1.3e-35	121.8	3.4	2.5e-12	46.9	0.1	4.5	4	0	0	4	4	4	4	PAS	domain
HATPase_c	PF02518.26	gi|298675480|ref|YP_003727230.1|	-	3.4e-31	108.0	0.1	6e-30	104.0	0.0	2.6	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_3	PF08447.12	gi|298675480|ref|YP_003727230.1|	-	8.2e-30	103.0	0.0	2.4e-14	53.4	0.1	4.6	4	0	0	4	4	4	4	PAS	fold
PAS_4	PF08448.10	gi|298675480|ref|YP_003727230.1|	-	2.8e-28	98.4	0.0	3.8e-07	30.3	0.0	4.2	4	0	0	4	4	4	4	PAS	fold
PAS_8	PF13188.7	gi|298675480|ref|YP_003727230.1|	-	1.2e-23	82.6	0.2	3.4e-07	30.1	0.0	3.8	3	0	0	3	3	3	3	PAS	domain
HisKA	PF00512.25	gi|298675480|ref|YP_003727230.1|	-	2.4e-16	59.5	0.0	7.7e-16	57.9	0.0	2.0	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_7	PF12860.7	gi|298675480|ref|YP_003727230.1|	-	3.2e-07	30.5	5.5	0.039	14.1	0.0	5.3	4	2	0	4	4	4	2	PAS	fold
PAS_10	PF13596.6	gi|298675480|ref|YP_003727230.1|	-	7.6e-07	29.7	0.2	0.0014	19.2	0.1	3.0	2	0	0	2	2	2	2	PAS	domain
PAS_11	PF14598.6	gi|298675480|ref|YP_003727230.1|	-	8.4e-06	25.9	0.0	0.0073	16.4	0.0	2.8	2	0	0	2	2	2	2	PAS	domain
LMBR1	PF04791.16	gi|298675480|ref|YP_003727230.1|	-	7.7e-05	21.8	4.6	0.00012	21.2	2.0	2.1	2	0	0	2	2	2	1	LMBR1-like	membrane	protein
MEKHLA	PF08670.11	gi|298675480|ref|YP_003727230.1|	-	9.6e-05	22.3	0.0	0.14	12.1	0.0	2.9	3	0	0	3	3	3	2	MEKHLA	domain
HATPase_c_5	PF14501.6	gi|298675480|ref|YP_003727230.1|	-	0.0026	17.6	0.0	0.011	15.6	0.0	2.2	2	0	0	2	2	1	1	GHKL	domain
HATPase_c_3	PF13589.6	gi|298675480|ref|YP_003727230.1|	-	0.031	14.1	0.0	0.11	12.3	0.0	1.9	2	0	0	2	2	2	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_12	PF18095.1	gi|298675480|ref|YP_003727230.1|	-	0.039	13.6	1.1	0.23	11.1	0.2	2.6	2	0	0	2	2	2	0	UPF0242	C-terminal	PAS-like	domain
HATPase_c_2	PF13581.6	gi|298675480|ref|YP_003727230.1|	-	0.084	12.8	0.0	0.19	11.7	0.0	1.6	1	0	0	1	1	1	0	Histidine	kinase-like	ATPase	domain
HATPase_c	PF02518.26	gi|298675481|ref|YP_003727231.1|	-	3.2e-20	72.7	0.2	1e-19	71.1	0.0	2.0	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_9	PF13426.7	gi|298675481|ref|YP_003727231.1|	-	1.3e-05	25.4	0.5	4.8e-05	23.6	0.5	2.0	1	1	0	1	1	1	1	PAS	domain
PAS	PF00989.25	gi|298675481|ref|YP_003727231.1|	-	2.6e-05	24.2	0.0	5.7e-05	23.1	0.0	1.6	1	0	0	1	1	1	1	PAS	fold
HATPase_c_5	PF14501.6	gi|298675481|ref|YP_003727231.1|	-	0.00028	20.7	0.9	0.00098	19.0	0.0	2.3	2	1	0	2	2	2	1	GHKL	domain
HATPase_c_2	PF13581.6	gi|298675481|ref|YP_003727231.1|	-	0.0046	16.9	0.0	0.011	15.7	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
HisKA	PF00512.25	gi|298675481|ref|YP_003727231.1|	-	0.071	13.2	0.1	0.19	11.8	0.1	1.8	1	0	0	1	1	1	0	His	Kinase	A	(phospho-acceptor)	domain
PAS_8	PF13188.7	gi|298675481|ref|YP_003727231.1|	-	0.14	12.2	0.0	0.39	10.8	0.0	1.8	1	0	0	1	1	1	0	PAS	domain
Aminotran_1_2	PF00155.21	gi|298675482|ref|YP_003727232.1|	-	4.4e-61	207.1	0.0	5e-61	206.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|298675482|ref|YP_003727232.1|	-	0.00032	19.3	0.0	0.00052	18.7	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.19	gi|298675482|ref|YP_003727232.1|	-	0.082	11.9	0.0	0.15	11.0	0.0	1.3	1	0	0	1	1	1	0	Aminotransferase	class-V
Alliinase_C	PF04864.13	gi|298675482|ref|YP_003727232.1|	-	0.1	11.5	0.0	0.83	8.5	0.0	2.1	2	0	0	2	2	2	0	Allinase
Chorismate_synt	PF01264.21	gi|298675483|ref|YP_003727233.1|	-	6.1e-143	475.4	0.9	6.9e-143	475.3	0.9	1.0	1	0	0	1	1	1	1	Chorismate	synthase
Cation_efflux	PF01545.21	gi|298675484|ref|YP_003727234.1|	-	7e-47	159.7	8.6	8.3e-47	159.5	8.6	1.1	1	0	0	1	1	1	1	Cation	efflux	family
ZT_dimer	PF16916.5	gi|298675484|ref|YP_003727234.1|	-	1.3e-22	79.7	3.6	2.4e-22	78.8	3.6	1.4	1	0	0	1	1	1	1	Dimerisation	domain	of	Zinc	Transporter
KapB	PF08810.10	gi|298675485|ref|YP_003727235.1|	-	0.035	14.3	0.2	0.077	13.2	0.2	1.5	1	0	0	1	1	1	0	Kinase	associated	protein	B
Ntox23	PF15528.6	gi|298675485|ref|YP_003727235.1|	-	0.14	12.3	1.4	0.22	11.7	1.4	1.5	1	1	0	1	1	1	0	Bacterial	toxin	23
PTS_IIB	PF02302.17	gi|298675485|ref|YP_003727235.1|	-	0.27	12.0	2.3	0.68	10.7	0.2	2.4	2	1	1	3	3	3	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
CbiA	PF01656.23	gi|298675486|ref|YP_003727236.1|	-	1.1e-20	74.0	0.1	1.3e-20	73.7	0.1	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|298675486|ref|YP_003727236.1|	-	7.6e-12	45.5	0.0	6.8e-11	42.4	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
ParA	PF10609.9	gi|298675486|ref|YP_003727236.1|	-	3.4e-11	43.1	0.2	5.2e-06	26.1	0.1	3.0	2	1	0	2	2	2	2	NUBPL	iron-transfer	P-loop	NTPase
ArsA_ATPase	PF02374.15	gi|298675486|ref|YP_003727236.1|	-	5.5e-08	32.3	0.2	1.8e-07	30.6	0.0	1.8	2	0	0	2	2	2	1	Anion-transporting	ATPase
Fer4_NifH	PF00142.18	gi|298675486|ref|YP_003727236.1|	-	1.9e-06	27.6	0.8	0.0024	17.4	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
CBP_BcsQ	PF06564.12	gi|298675486|ref|YP_003727236.1|	-	3.1e-06	26.8	0.0	0.0002	20.9	0.2	2.1	2	0	0	2	2	2	1	Cellulose	biosynthesis	protein	BcsQ
AAA_26	PF13500.6	gi|298675486|ref|YP_003727236.1|	-	9.4e-05	22.3	0.9	0.0013	18.6	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|298675486|ref|YP_003727236.1|	-	0.0004	20.2	0.0	0.0013	18.5	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|298675486|ref|YP_003727236.1|	-	0.00055	20.4	0.0	0.0012	19.3	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
NTPase_1	PF03266.15	gi|298675486|ref|YP_003727236.1|	-	0.00071	19.5	0.0	0.0014	18.6	0.0	1.4	1	0	0	1	1	1	1	NTPase
NACHT	PF05729.12	gi|298675486|ref|YP_003727236.1|	-	0.0015	18.4	0.2	0.0029	17.5	0.2	1.4	1	0	0	1	1	1	1	NACHT	domain
AAA_18	PF13238.6	gi|298675486|ref|YP_003727236.1|	-	0.0018	18.9	0.0	0.003	18.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DUF87	PF01935.17	gi|298675486|ref|YP_003727236.1|	-	0.0021	18.2	0.0	0.0044	17.2	0.0	1.6	1	0	0	1	1	1	1	Helicase	HerA,	central	domain
SRP54	PF00448.22	gi|298675486|ref|YP_003727236.1|	-	0.0032	17.1	0.4	0.0058	16.3	0.4	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
ABC_tran	PF00005.27	gi|298675486|ref|YP_003727236.1|	-	0.0039	17.7	0.0	0.0077	16.7	0.0	1.7	1	1	0	1	1	1	1	ABC	transporter
NB-ARC	PF00931.22	gi|298675486|ref|YP_003727236.1|	-	0.0049	16.1	0.6	0.11	11.6	0.2	2.2	2	0	0	2	2	2	1	NB-ARC	domain
APS_kinase	PF01583.20	gi|298675486|ref|YP_003727236.1|	-	0.0097	15.8	0.1	0.018	15.0	0.1	1.5	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_14	PF13173.6	gi|298675486|ref|YP_003727236.1|	-	0.014	15.4	0.0	0.14	12.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_5	PF07728.14	gi|298675486|ref|YP_003727236.1|	-	0.016	15.2	0.0	0.024	14.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.6	gi|298675486|ref|YP_003727236.1|	-	0.019	15.2	0.0	0.038	14.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
CLP1_P	PF16575.5	gi|298675486|ref|YP_003727236.1|	-	0.019	14.7	0.2	0.28	11.0	0.1	2.6	2	2	1	3	3	3	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA_30	PF13604.6	gi|298675486|ref|YP_003727236.1|	-	0.02	14.6	1.0	0.061	13.0	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
PRK	PF00485.18	gi|298675486|ref|YP_003727236.1|	-	0.024	14.4	0.0	0.042	13.6	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
MeaB	PF03308.16	gi|298675486|ref|YP_003727236.1|	-	0.025	13.6	0.0	0.044	12.8	0.0	1.5	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
MobB	PF03205.14	gi|298675486|ref|YP_003727236.1|	-	0.034	14.0	0.0	0.07	13.0	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KTI12	PF08433.10	gi|298675486|ref|YP_003727236.1|	-	0.045	13.2	0.0	0.07	12.6	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
IstB_IS21	PF01695.17	gi|298675486|ref|YP_003727236.1|	-	0.045	13.5	0.0	0.082	12.6	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_2	PF07724.14	gi|298675486|ref|YP_003727236.1|	-	0.047	13.8	0.0	0.11	12.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
AAA_28	PF13521.6	gi|298675486|ref|YP_003727236.1|	-	0.061	13.6	0.0	0.12	12.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|298675486|ref|YP_003727236.1|	-	0.071	12.8	1.7	0.2	11.3	1.7	1.6	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_33	PF13671.6	gi|298675486|ref|YP_003727236.1|	-	0.17	12.0	0.0	0.47	10.6	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|298675486|ref|YP_003727236.1|	-	0.18	11.3	0.0	0.29	10.6	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_29	PF13555.6	gi|298675486|ref|YP_003727236.1|	-	0.43	10.4	1.7	0.96	9.2	0.2	2.1	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
CCT	PF06203.14	gi|298675487|ref|YP_003727237.1|	-	0.021	14.9	0.0	0.041	13.9	0.0	1.4	1	0	0	1	1	1	0	CCT	motif
NIF3	PF01784.18	gi|298675488|ref|YP_003727238.1|	-	1.5e-53	182.0	0.0	1.7e-53	181.7	0.0	1.0	1	0	0	1	1	1	1	NIF3	(NGG1p	interacting	factor	3)
Adeno_IVa2	PF02456.15	gi|298675489|ref|YP_003727239.1|	-	0.091	11.5	0.5	0.092	11.5	0.5	1.1	1	0	0	1	1	1	0	Adenovirus	IVa2	protein
Prenyltransf	PF01255.19	gi|298675491|ref|YP_003727241.1|	-	1.5e-42	145.6	0.0	1.8e-42	145.4	0.0	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
DUF469	PF04320.14	gi|298675491|ref|YP_003727241.1|	-	0.07	14.0	0.0	0.18	12.7	0.0	1.7	2	0	0	2	2	2	0	Protein	with	unknown	function	(DUF469)
DUF11	PF01345.18	gi|298675492|ref|YP_003727242.1|	-	1e-08	35.3	6.8	5.2e-06	26.7	0.6	3.1	2	1	0	2	2	2	2	Domain	of	unknown	function	DUF11
BatD	PF13584.6	gi|298675492|ref|YP_003727242.1|	-	8.9e-08	31.4	5.3	0.00015	20.7	1.8	2.5	2	0	0	2	2	2	2	Oxygen	tolerance
TRAP_beta	PF05753.14	gi|298675492|ref|YP_003727242.1|	-	2.7e-06	26.9	8.1	0.0016	17.9	1.9	3.3	2	1	1	3	3	3	3	Translocon-associated	protein	beta	(TRAPB)
CARDB	PF07705.11	gi|298675492|ref|YP_003727242.1|	-	9.9e-06	25.8	11.6	0.035	14.4	0.8	3.7	3	0	0	3	3	3	3	CARDB
DUF2393	PF09624.10	gi|298675492|ref|YP_003727242.1|	-	0.0028	17.7	8.0	1.2	9.1	0.0	3.7	3	0	0	3	3	3	3	Protein	of	unknown	function	(DUF2393)
bMG10	PF17973.1	gi|298675493|ref|YP_003727243.1|	-	2.9e-07	30.7	0.1	0.048	13.9	0.1	3.7	2	2	1	4	4	4	2	Bacterial	Alpha-2-macroglobulin	MG10	domain
DUF11	PF01345.18	gi|298675493|ref|YP_003727243.1|	-	9.1e-05	22.7	2.2	0.00023	21.4	0.0	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF11
MFP2b	PF12150.8	gi|298675493|ref|YP_003727243.1|	-	0.02	14.2	0.1	0.037	13.3	0.1	1.4	1	0	0	1	1	1	0	Cytosolic	motility	protein
Top6b_C	PF18000.1	gi|298675493|ref|YP_003727243.1|	-	0.024	14.8	4.3	0.66	10.2	0.2	3.6	3	1	0	3	3	3	0	Type	2	DNA	topoisomerase	6	subunit	B	C-terminal	domain
Prominin	PF05478.11	gi|298675493|ref|YP_003727243.1|	-	0.025	12.6	0.7	0.041	11.8	0.7	1.4	1	0	0	1	1	1	0	Prominin
Cupredoxin_1	PF13473.6	gi|298675493|ref|YP_003727243.1|	-	0.046	13.8	4.8	2.4	8.3	0.1	3.1	2	1	1	3	3	3	0	Cupredoxin-like	domain
MG1	PF17790.1	gi|298675493|ref|YP_003727243.1|	-	0.055	13.9	0.7	0.18	12.2	0.1	2.3	2	0	0	2	2	2	0	Macroglobulin	domain	MG1
MMR_HSR1	PF01926.23	gi|298675494|ref|YP_003727244.1|	-	6.6e-18	64.9	0.0	9.4e-18	64.4	0.0	1.2	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|298675494|ref|YP_003727244.1|	-	3.2e-12	46.3	0.6	5.4e-11	42.3	0.6	2.1	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
RsgA_GTPase	PF03193.16	gi|298675494|ref|YP_003727244.1|	-	4.2e-05	23.5	1.3	0.028	14.3	0.2	2.8	3	1	0	3	3	3	2	RsgA	GTPase
GTP_EFTU	PF00009.27	gi|298675494|ref|YP_003727244.1|	-	0.00079	19.0	0.2	0.005	16.4	0.1	2.0	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Dynamin_N	PF00350.23	gi|298675494|ref|YP_003727244.1|	-	0.0017	18.5	0.0	0.0024	18.0	0.0	1.5	1	1	0	1	1	1	1	Dynamin	family
Septin	PF00735.18	gi|298675494|ref|YP_003727244.1|	-	0.021	14.1	0.2	0.071	12.4	0.0	1.9	1	1	1	2	2	2	0	Septin
AAA_18	PF13238.6	gi|298675494|ref|YP_003727244.1|	-	0.075	13.6	0.0	0.13	12.9	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
Roc	PF08477.13	gi|298675494|ref|YP_003727244.1|	-	0.11	12.7	0.2	0.31	11.3	0.0	1.8	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Radical_SAM	PF04055.21	gi|298675495|ref|YP_003727245.1|	-	8e-19	68.6	0.1	9.5e-19	68.4	0.1	1.1	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|298675495|ref|YP_003727245.1|	-	2e-08	34.4	0.0	3.2e-08	33.7	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
GGACT	PF06094.12	gi|298675496|ref|YP_003727246.1|	-	5.6e-19	68.9	0.0	6.2e-19	68.8	0.0	1.0	1	0	0	1	1	1	1	Gamma-glutamyl	cyclotransferase,	AIG2-like
FAD_binding_3	PF01494.19	gi|298675497|ref|YP_003727247.1|	-	1.7e-12	47.3	0.1	6e-10	38.9	0.0	2.5	2	1	0	2	2	2	2	FAD	binding	domain
DAO	PF01266.24	gi|298675497|ref|YP_003727247.1|	-	3.6e-11	43.2	1.2	1.9e-05	24.4	0.1	2.3	1	1	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.7	gi|298675497|ref|YP_003727247.1|	-	2.8e-10	40.1	0.1	3.1e-09	36.7	0.0	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|298675497|ref|YP_003727247.1|	-	9.9e-10	38.1	0.0	1.7e-06	27.5	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|298675497|ref|YP_003727247.1|	-	2.4e-07	30.2	0.0	4.3e-07	29.4	0.0	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.14	gi|298675497|ref|YP_003727247.1|	-	2.5e-07	29.8	0.1	5.6e-07	28.6	0.1	1.5	2	0	0	2	2	2	1	HI0933-like	protein
NAD_binding_8	PF13450.6	gi|298675497|ref|YP_003727247.1|	-	3.3e-07	30.4	0.0	1e-06	28.9	0.0	1.9	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.12	gi|298675497|ref|YP_003727247.1|	-	7.3e-07	28.6	0.1	1.2e-05	24.6	0.1	2.3	1	1	0	1	1	1	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.27	gi|298675497|ref|YP_003727247.1|	-	1.6e-06	28.6	0.0	0.0073	16.8	0.0	2.7	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.14	gi|298675497|ref|YP_003727247.1|	-	2e-06	27.0	0.0	0.013	14.4	0.0	2.2	2	0	0	2	2	2	2	Tryptophan	halogenase
Thi4	PF01946.17	gi|298675497|ref|YP_003727247.1|	-	5.5e-06	25.8	0.0	1.2e-05	24.6	0.0	1.5	1	0	0	1	1	1	1	Thi4	family
FAD_binding_2	PF00890.24	gi|298675497|ref|YP_003727247.1|	-	2.7e-05	23.4	0.2	4.8e-05	22.6	0.2	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_3	PF13738.6	gi|298675497|ref|YP_003727247.1|	-	0.0021	17.4	0.1	0.024	13.9	0.1	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
ThiF	PF00899.21	gi|298675497|ref|YP_003727247.1|	-	0.0032	16.9	0.0	0.96	8.7	0.0	2.3	2	1	0	2	2	2	2	ThiF	family
AlaDh_PNT_C	PF01262.21	gi|298675497|ref|YP_003727247.1|	-	0.0065	15.8	0.0	0.015	14.6	0.0	1.6	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.18	gi|298675497|ref|YP_003727247.1|	-	0.023	14.6	0.0	0.064	13.1	0.0	1.7	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.18	gi|298675497|ref|YP_003727247.1|	-	0.085	13.1	0.0	0.17	12.1	0.0	1.5	1	0	0	1	1	1	0	TrkA-N	domain
SnoaL_4	PF13577.6	gi|298675498|ref|YP_003727248.1|	-	0.05	13.7	0.0	0.056	13.6	0.0	1.1	1	0	0	1	1	1	0	SnoaL-like	domain
Orn_Arg_deC_N	PF02784.16	gi|298675499|ref|YP_003727249.1|	-	2.8e-61	207.0	0.0	1.7e-60	204.5	0.0	1.9	2	0	0	2	2	2	1	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
Orn_DAP_Arg_deC	PF00278.22	gi|298675499|ref|YP_003727249.1|	-	6.3e-26	90.5	0.0	6.7e-26	90.4	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	C-terminal	sheet	domain
Ala_racemase_N	PF01168.20	gi|298675499|ref|YP_003727249.1|	-	6.3e-11	42.3	0.0	1.3e-10	41.3	0.0	1.5	1	1	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
AP_endonuc_2	PF01261.24	gi|298675499|ref|YP_003727249.1|	-	0.15	11.5	0.0	1.1	8.7	0.0	2.1	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
FKBP_C	PF00254.28	gi|298675500|ref|YP_003727250.1|	-	1.1e-12	48.1	1.1	6.3e-11	42.4	0.3	2.5	2	0	0	2	2	2	2	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
FKBP26_C	PF18046.1	gi|298675500|ref|YP_003727250.1|	-	3.4e-09	36.6	0.0	8.4e-09	35.4	0.0	1.7	1	0	0	1	1	1	1	FKBP26_C-terminal
MCH	PF02289.16	gi|298675501|ref|YP_003727251.1|	-	9.1e-134	445.6	0.1	1e-133	445.5	0.1	1.0	1	0	0	1	1	1	1	Cyclohydrolase	(MCH)
DUF2124	PF09897.9	gi|298675502|ref|YP_003727252.1|	-	2.6e-55	186.2	0.0	3e-55	186.0	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2124)
CMD	PF02627.20	gi|298675503|ref|YP_003727253.1|	-	4.3e-11	42.7	0.2	7.4e-11	42.0	0.0	1.4	2	0	0	2	2	2	1	Carboxymuconolactone	decarboxylase	family
CwfJ_C_1	PF04677.15	gi|298675503|ref|YP_003727253.1|	-	0.031	14.1	0.1	0.066	13.1	0.0	1.7	1	1	1	2	2	2	0	Protein	similar	to	CwfJ	C-terminus	1
MreB_Mbl	PF06723.13	gi|298675503|ref|YP_003727253.1|	-	0.063	12.1	0.0	0.073	11.9	0.0	1.1	1	0	0	1	1	1	0	MreB/Mbl	protein
Trnau1ap	PF17654.1	gi|298675503|ref|YP_003727253.1|	-	0.072	14.0	0.0	1.4	9.9	0.0	2.1	2	0	0	2	2	2	0	Selenocysteine	tRNA	1	associated	proteins
Tho1_MOS11_C	PF18592.1	gi|298675503|ref|YP_003727253.1|	-	0.075	12.8	0.1	0.29	11.0	0.0	1.9	2	0	0	2	2	2	0	Tho1/MOS11	C-terminal	domain
Met_10	PF02475.16	gi|298675504|ref|YP_003727254.1|	-	2.2e-62	210.3	0.0	3.3e-62	209.8	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Trm5_N	PF18093.1	gi|298675504|ref|YP_003727254.1|	-	2.2e-18	65.9	3.2	5.3e-18	64.6	3.2	1.7	1	0	0	1	1	1	1	tRNA	methyltransferase	5	N-terminal	domain
Methyltransf_15	PF09445.10	gi|298675504|ref|YP_003727254.1|	-	1.3e-05	24.9	0.0	2.1e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MTS	PF05175.14	gi|298675504|ref|YP_003727254.1|	-	0.00075	19.1	0.0	0.0012	18.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.7	gi|298675504|ref|YP_003727254.1|	-	0.0017	18.3	0.0	0.11	12.4	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
GidB	PF02527.15	gi|298675504|ref|YP_003727254.1|	-	0.0026	17.1	0.0	0.0039	16.5	0.0	1.2	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_25	PF13649.6	gi|298675504|ref|YP_003727254.1|	-	0.033	14.9	0.0	0.058	14.1	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
tRNA_U5-meth_tr	PF05958.11	gi|298675504|ref|YP_003727254.1|	-	0.15	11.0	0.0	0.24	10.3	0.0	1.2	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
V4R	PF02830.18	gi|298675505|ref|YP_003727255.1|	-	4.4e-12	45.8	1.3	5.6e-12	45.5	1.3	1.1	1	0	0	1	1	1	1	V4R	domain
DUF2110	PF09883.9	gi|298675506|ref|YP_003727256.1|	-	9.1e-88	293.6	0.1	1e-87	293.4	0.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2110)
HTH_27	PF13463.6	gi|298675507|ref|YP_003727257.1|	-	0.00029	21.3	0.0	0.00055	20.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
AAA_13	PF13166.6	gi|298675507|ref|YP_003727257.1|	-	0.00076	18.3	7.3	0.00087	18.1	7.3	1.0	1	0	0	1	1	1	1	AAA	domain
HTH_45	PF14947.6	gi|298675507|ref|YP_003727257.1|	-	0.0038	17.2	0.1	0.0064	16.5	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.6	gi|298675507|ref|YP_003727257.1|	-	0.0054	16.5	1.4	0.0087	15.8	1.4	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HOOK	PF05622.12	gi|298675507|ref|YP_003727257.1|	-	0.01	14.0	8.9	0.013	13.7	8.9	1.0	1	0	0	1	1	1	0	HOOK	protein
DUF2250	PF10007.9	gi|298675507|ref|YP_003727257.1|	-	0.014	15.5	0.0	0.031	14.4	0.0	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Med30	PF11315.8	gi|298675507|ref|YP_003727257.1|	-	0.017	15.3	4.3	0.098	12.9	4.3	2.0	1	1	0	1	1	1	0	Mediator	complex	subunit	30
MarR	PF01047.22	gi|298675507|ref|YP_003727257.1|	-	0.034	14.1	0.3	0.12	12.4	0.0	2.0	2	0	0	2	2	2	0	MarR	family
EURL	PF06937.11	gi|298675507|ref|YP_003727257.1|	-	0.038	13.4	4.2	0.05	13.0	3.9	1.3	1	1	0	1	1	1	0	EURL	protein
YscO-like	PF16789.5	gi|298675507|ref|YP_003727257.1|	-	0.04	13.9	2.1	0.083	12.9	2.1	1.4	1	1	0	1	1	1	0	YscO-like	protein
UPF0061	PF02696.14	gi|298675507|ref|YP_003727257.1|	-	0.043	12.6	0.9	0.052	12.3	0.9	1.1	1	0	0	1	1	1	0	Uncharacterized	ACR,	YdiU/UPF0061	family
Atg14	PF10186.9	gi|298675507|ref|YP_003727257.1|	-	0.086	11.9	9.3	0.032	13.3	6.4	1.6	2	0	0	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
DUF1664	PF07889.12	gi|298675507|ref|YP_003727257.1|	-	0.094	12.8	2.3	0.15	12.1	0.7	2.0	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
CENP-F_leu_zip	PF10473.9	gi|298675507|ref|YP_003727257.1|	-	0.14	12.2	8.6	0.33	11.0	8.6	1.6	1	1	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Tropomyosin_1	PF12718.7	gi|298675507|ref|YP_003727257.1|	-	0.32	11.1	8.1	0.5	10.5	8.1	1.4	1	0	0	1	1	1	0	Tropomyosin	like
NPV_P10	PF05531.12	gi|298675507|ref|YP_003727257.1|	-	1.2	9.6	8.6	3.7	8.1	1.8	2.8	2	1	2	4	4	3	0	Nucleopolyhedrovirus	P10	protein
Fib_alpha	PF08702.10	gi|298675507|ref|YP_003727257.1|	-	5.1	7.3	9.5	11	6.2	9.4	1.6	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
TRM	PF02005.16	gi|298675508|ref|YP_003727258.1|	-	1.6e-106	356.6	0.0	2e-106	356.4	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
HTH_6	PF01418.17	gi|298675508|ref|YP_003727258.1|	-	0.064	13.3	0.0	0.31	11.0	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain,	rpiR	family
DUF2067	PF09840.9	gi|298675508|ref|YP_003727258.1|	-	0.11	12.1	0.0	0.24	10.9	0.0	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
zf-ribbon_3	PF13248.6	gi|298675508|ref|YP_003727258.1|	-	5	6.7	7.3	7.4	6.1	0.4	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
Cupredoxin_1	PF13473.6	gi|298675509|ref|YP_003727259.1|	-	6.1e-08	32.7	0.0	8.9e-08	32.2	0.0	1.2	1	0	0	1	1	1	1	Cupredoxin-like	domain
Copper-bind	PF00127.20	gi|298675509|ref|YP_003727259.1|	-	0.00031	21.1	0.1	0.01	16.3	0.1	2.2	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
Lactamase_B	PF00753.27	gi|298675510|ref|YP_003727260.1|	-	0.00031	20.8	1.4	0.0035	17.4	1.8	2.3	2	1	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|298675510|ref|YP_003727260.1|	-	0.00038	20.0	0.0	0.15	11.6	0.0	2.2	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|298675510|ref|YP_003727260.1|	-	0.013	15.4	0.0	0.026	14.4	0.0	1.6	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
DUF4010	PF13194.6	gi|298675511|ref|YP_003727261.1|	-	1.3e-47	162.2	19.2	1.3e-47	162.2	19.2	2.8	3	1	0	3	3	3	1	Domain	of	unknown	function	(DUF4010)
MgtC	PF02308.16	gi|298675511|ref|YP_003727261.1|	-	2.8e-20	72.9	8.6	2.8e-20	72.9	8.6	3.4	3	1	0	3	3	3	1	MgtC	family
Polyoma_coat2	PF00761.20	gi|298675511|ref|YP_003727261.1|	-	3.6	7.2	6.3	6.8	6.3	6.3	1.5	1	0	0	1	1	1	0	Polyomavirus	coat	protein
Metallophos	PF00149.28	gi|298675512|ref|YP_003727262.1|	-	8.9e-22	78.6	0.1	1.5e-21	77.8	0.1	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|298675512|ref|YP_003727262.1|	-	7.1e-20	71.9	0.0	9.6e-20	71.4	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.6	gi|298675512|ref|YP_003727262.1|	-	9.5e-08	31.7	0.2	2.5e-05	23.7	0.2	2.6	1	1	1	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
PP2C_2	PF13672.6	gi|298675513|ref|YP_003727263.1|	-	1.1e-14	54.6	0.2	1.5e-14	54.1	0.2	1.2	1	0	0	1	1	1	1	Protein	phosphatase	2C
PP2C	PF00481.21	gi|298675513|ref|YP_003727263.1|	-	1.3e-12	48.0	0.9	1.9e-09	37.5	0.2	2.1	2	0	0	2	2	2	2	Protein	phosphatase	2C
SpoIIE	PF07228.12	gi|298675513|ref|YP_003727263.1|	-	1.2e-06	28.6	0.4	1.9e-06	27.9	0.4	1.3	1	0	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
PBP-Tp47_c	PF14888.6	gi|298675514|ref|YP_003727264.1|	-	0.0087	16.0	0.0	0.011	15.7	0.0	1.1	1	0	0	1	1	1	1	Penicillin-binding	protein	Tp47	domain	C
DUF1236	PF06823.12	gi|298675514|ref|YP_003727264.1|	-	0.013	15.4	0.0	0.017	15.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1236)
RuvA_N	PF01330.21	gi|298675514|ref|YP_003727264.1|	-	0.057	13.5	0.1	0.088	12.9	0.1	1.3	1	0	0	1	1	1	0	RuvA	N	terminal	domain
OrfB_IS605	PF01385.19	gi|298675515|ref|YP_003727265.1|	-	1.7e-21	76.6	0.0	3.4e-21	75.7	0.0	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675515|ref|YP_003727265.1|	-	6.5e-12	45.2	0.0	1.4e-11	44.1	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Glyco_hydro_97	PF10566.9	gi|298675515|ref|YP_003727265.1|	-	0.0004	19.8	0.2	0.0007	19.0	0.2	1.4	1	0	0	1	1	1	1	Glycoside	hydrolase	97
HEPN_Swt1	PF18731.1	gi|298675515|ref|YP_003727265.1|	-	0.11	12.9	1.0	0.28	11.6	1.0	1.7	1	0	0	1	1	1	0	Swt1-like	HEPN
EAP30	PF04157.16	gi|298675515|ref|YP_003727265.1|	-	0.11	11.7	0.0	0.19	11.0	0.0	1.4	1	0	0	1	1	1	0	EAP30/Vps36	family
RuvX	PF03652.15	gi|298675515|ref|YP_003727265.1|	-	0.14	12.5	0.0	0.29	11.5	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	resolvase
Methyltrn_RNA_2	PF04013.12	gi|298675516|ref|YP_003727266.1|	-	1.8e-64	217.1	0.0	2.1e-64	216.9	0.0	1.0	1	0	0	1	1	1	1	Putative	SAM-dependent	RNA	methyltransferase
THUMP	PF02926.17	gi|298675517|ref|YP_003727267.1|	-	1.3e-09	38.2	0.3	5.8e-09	36.2	0.0	2.2	3	0	0	3	3	3	1	THUMP	domain
DUF2703	PF10865.8	gi|298675517|ref|YP_003727267.1|	-	0.032	14.4	1.3	0.14	12.4	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF2703)
TruB_N	PF01509.18	gi|298675517|ref|YP_003727267.1|	-	0.044	14.1	0.1	0.91	9.9	0.1	2.4	1	1	0	1	1	1	0	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
Ribosomal_L21e	PF01157.18	gi|298675518|ref|YP_003727268.1|	-	3.7e-35	119.8	0.2	4.1e-35	119.7	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
RNA_pol_Rpb4	PF03874.16	gi|298675519|ref|YP_003727269.1|	-	7.4e-11	42.5	7.5	9.6e-11	42.1	7.5	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
FliG_M	PF14841.6	gi|298675519|ref|YP_003727269.1|	-	0.0034	17.6	0.4	0.0034	17.6	0.4	2.5	3	1	1	4	4	4	1	FliG	middle	domain
Cbl_N	PF02262.16	gi|298675519|ref|YP_003727269.1|	-	0.0055	16.7	0.5	0.61	10.1	0.1	2.1	1	1	1	2	2	2	2	CBL	proto-oncogene	N-terminal	domain	1
EF-hand_8	PF13833.6	gi|298675519|ref|YP_003727269.1|	-	0.0091	15.8	0.1	0.038	13.8	0.0	2.0	2	0	0	2	2	2	1	EF-hand	domain	pair
SbcD_C	PF12320.8	gi|298675519|ref|YP_003727269.1|	-	0.13	12.5	2.7	0.17	12.2	2.7	1.1	1	0	0	1	1	1	0	Type	5	capsule	protein	repressor	C-terminal	domain
FumaraseC_C	PF10415.9	gi|298675519|ref|YP_003727269.1|	-	0.29	11.6	0.1	0.29	11.6	0.1	2.7	3	1	0	3	3	3	0	Fumarase	C	C-terminus
CRR7	PF12095.8	gi|298675519|ref|YP_003727269.1|	-	1.4	9.4	5.8	1.7	9.2	2.0	2.6	1	1	0	2	2	2	0	Protein	CHLORORESPIRATORY	REDUCTION	7
DUF655	PF04919.12	gi|298675520|ref|YP_003727270.1|	-	1.9e-69	233.2	0.1	2.2e-69	233.0	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.6	gi|298675520|ref|YP_003727270.1|	-	0.0077	16.5	0.0	0.013	15.8	0.0	1.3	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|298675520|ref|YP_003727270.1|	-	0.021	15.0	0.0	0.058	13.7	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
PAS_9	PF13426.7	gi|298675521|ref|YP_003727271.1|	-	1.1e-08	35.2	0.0	1.4e-08	34.9	0.0	1.2	1	0	0	1	1	1	1	PAS	domain
PAS	PF00989.25	gi|298675521|ref|YP_003727271.1|	-	2.1e-06	27.7	0.0	5.8e-06	26.3	0.0	1.7	1	1	0	1	1	1	1	PAS	fold
PAS_8	PF13188.7	gi|298675521|ref|YP_003727271.1|	-	1.6e-05	24.8	0.0	2.5e-05	24.2	0.0	1.3	1	0	0	1	1	1	1	PAS	domain
PAS_3	PF08447.12	gi|298675521|ref|YP_003727271.1|	-	6.6e-05	23.1	0.0	9.6e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	PAS	fold
PAS_11	PF14598.6	gi|298675521|ref|YP_003727271.1|	-	0.00082	19.5	0.0	0.001	19.2	0.0	1.2	1	0	0	1	1	1	1	PAS	domain
PAS_4	PF08448.10	gi|298675521|ref|YP_003727271.1|	-	0.00085	19.5	0.0	0.0011	19.2	0.0	1.1	1	0	0	1	1	1	1	PAS	fold
PAS_12	PF18095.1	gi|298675521|ref|YP_003727271.1|	-	0.017	14.8	0.1	0.021	14.4	0.1	1.1	1	0	0	1	1	1	0	UPF0242	C-terminal	PAS-like	domain
Terminase_2	PF03592.16	gi|298675521|ref|YP_003727271.1|	-	0.029	14.9	0.0	0.042	14.3	0.0	1.2	1	0	0	1	1	1	0	Terminase	small	subunit
DUF3877	PF12993.7	gi|298675521|ref|YP_003727271.1|	-	0.041	13.8	0.4	0.1	12.5	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function,	E.	rectale	Gene	description	(DUF3877)
OrfB_Zn_ribbon	PF07282.11	gi|298675522|ref|YP_003727272.1|	-	3.9e-25	87.6	2.0	1.8e-24	85.5	1.0	2.3	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675522|ref|YP_003727272.1|	-	2.9e-10	40.4	1.2	2.9e-10	40.4	1.2	1.7	2	0	0	2	2	2	1	Probable	transposase
HypA	PF01155.19	gi|298675522|ref|YP_003727272.1|	-	0.059	13.4	0.1	0.099	12.7	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Tnp_zf-ribbon_2	PF13842.6	gi|298675522|ref|YP_003727272.1|	-	0.27	12.1	6.2	0.61	10.9	6.2	1.6	1	0	0	1	1	1	0	DDE_Tnp_1-like	zinc-ribbon
UPF0547	PF10571.9	gi|298675522|ref|YP_003727272.1|	-	0.43	10.7	2.6	0.89	9.7	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DNA_RNApol_7kD	PF03604.13	gi|298675522|ref|YP_003727272.1|	-	0.54	10.0	7.4	2	8.1	7.4	2.0	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Rubredoxin_2	PF18073.1	gi|298675522|ref|YP_003727272.1|	-	0.77	9.5	4.8	6.4	6.6	0.5	2.4	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
DUF2387	PF09526.10	gi|298675522|ref|YP_003727272.1|	-	1	9.6	5.5	13	6.1	1.7	3.0	2	1	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Zn_Tnp_IS1595	PF12760.7	gi|298675522|ref|YP_003727272.1|	-	1.5	8.8	5.2	3.3	7.8	5.2	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Ribosomal_L37e	PF01907.19	gi|298675522|ref|YP_003727272.1|	-	2.2	8.5	8.1	4.4	7.5	0.5	2.7	1	1	1	2	2	2	0	Ribosomal	protein	L37e
RrnaAD	PF00398.20	gi|298675523|ref|YP_003727273.1|	-	3.1e-61	206.8	0.2	3.9e-61	206.4	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.6	gi|298675523|ref|YP_003727273.1|	-	2.3e-07	31.4	0.0	4.9e-07	30.4	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298675523|ref|YP_003727273.1|	-	4.8e-05	23.9	0.0	0.00031	21.3	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
DREV	PF05219.12	gi|298675523|ref|YP_003727273.1|	-	0.0001	21.5	0.0	0.00017	20.8	0.0	1.4	1	1	0	1	1	1	1	DREV	methyltransferase
Met_10	PF02475.16	gi|298675523|ref|YP_003727273.1|	-	0.00041	20.2	0.1	0.00073	19.3	0.1	1.5	1	1	0	1	1	1	1	Met-10+	like-protein
Methyltransf_31	PF13847.6	gi|298675523|ref|YP_003727273.1|	-	0.00062	19.6	0.0	0.0012	18.7	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298675523|ref|YP_003727273.1|	-	0.00067	19.5	0.0	0.00088	19.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
DOT1	PF08123.13	gi|298675523|ref|YP_003727273.1|	-	0.0021	17.6	0.0	0.0042	16.7	0.0	1.4	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_12	PF08242.12	gi|298675523|ref|YP_003727273.1|	-	0.0051	17.5	0.0	0.014	16.1	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_PK	PF05891.12	gi|298675523|ref|YP_003727273.1|	-	0.013	15.1	0.0	0.02	14.4	0.0	1.3	1	0	0	1	1	1	0	AdoMet	dependent	proline	di-methyltransferase
PCMT	PF01135.19	gi|298675523|ref|YP_003727273.1|	-	0.014	15.2	0.0	0.027	14.2	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
NodS	PF05401.11	gi|298675523|ref|YP_003727273.1|	-	0.016	14.9	0.0	0.024	14.3	0.0	1.2	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
MTS	PF05175.14	gi|298675523|ref|YP_003727273.1|	-	0.087	12.4	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
CMAS	PF02353.20	gi|298675523|ref|YP_003727273.1|	-	0.09	12.1	0.0	0.14	11.4	0.0	1.3	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_32	PF13679.6	gi|298675523|ref|YP_003727273.1|	-	0.13	12.3	0.0	0.24	11.4	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298675524|ref|YP_003727274.1|	-	1.1e-08	35.0	0.0	1.6e-08	34.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|298675524|ref|YP_003727274.1|	-	2.6e-08	33.6	0.0	9e-07	28.6	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_23	PF13489.6	gi|298675524|ref|YP_003727274.1|	-	2.9e-06	27.2	0.0	0.00012	22.0	0.0	2.5	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298675524|ref|YP_003727274.1|	-	4.9e-06	27.2	0.0	7e-05	23.5	0.0	2.2	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298675524|ref|YP_003727274.1|	-	0.00015	22.4	0.0	0.0071	17.0	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
PCMT	PF01135.19	gi|298675524|ref|YP_003727274.1|	-	0.00015	21.6	0.0	0.00022	21.0	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_12	PF08242.12	gi|298675524|ref|YP_003727274.1|	-	0.0017	19.1	0.0	0.14	12.9	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
CMAS	PF02353.20	gi|298675524|ref|YP_003727274.1|	-	0.0037	16.6	0.0	0.011	15.0	0.0	1.7	2	0	0	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
RrnaAD	PF00398.20	gi|298675524|ref|YP_003727274.1|	-	0.0038	16.3	0.0	0.0052	15.9	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
MetW	PF07021.12	gi|298675524|ref|YP_003727274.1|	-	0.0063	16.1	0.0	0.0088	15.7	0.0	1.1	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_18	PF12847.7	gi|298675524|ref|YP_003727274.1|	-	0.03	14.3	0.0	0.12	12.3	0.0	1.8	2	0	0	2	2	2	0	Methyltransferase	domain
FtsJ	PF01728.19	gi|298675524|ref|YP_003727274.1|	-	0.074	13.2	0.0	0.12	12.4	0.0	1.3	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
Methyltransf_24	PF13578.6	gi|298675524|ref|YP_003727274.1|	-	0.09	13.8	0.0	0.31	12.1	0.0	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
5_nucleotid	PF05761.14	gi|298675524|ref|YP_003727274.1|	-	0.11	11.3	0.1	0.17	10.7	0.1	1.2	1	0	0	1	1	1	0	5'	nucleotidase	family
PrmA	PF06325.13	gi|298675524|ref|YP_003727274.1|	-	0.12	11.8	0.0	0.58	9.5	0.0	1.8	2	0	0	2	2	2	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_32	PF13679.6	gi|298675524|ref|YP_003727274.1|	-	0.12	12.4	0.0	0.17	11.8	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_16	PF10294.9	gi|298675524|ref|YP_003727274.1|	-	0.15	11.8	0.0	0.2	11.3	0.0	1.2	1	0	0	1	1	1	0	Lysine	methyltransferase
OrfB_IS605	PF01385.19	gi|298675525|ref|YP_003727275.1|	-	8.2e-26	90.6	0.7	2.2e-25	89.2	0.0	2.0	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675525|ref|YP_003727275.1|	-	9e-12	44.8	0.3	2.4e-11	43.4	0.1	1.9	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
RuvX	PF03652.15	gi|298675525|ref|YP_003727275.1|	-	0.018	15.5	0.0	0.037	14.4	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	resolvase
DUF919	PF06034.11	gi|298675525|ref|YP_003727275.1|	-	0.96	9.3	4.2	0.29	11.0	0.7	2.0	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
PFO_beta_C	PF12367.8	gi|298675526|ref|YP_003727276.1|	-	3.2e-30	104.1	0.5	5.2e-30	103.4	0.5	1.4	1	0	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
TPP_enzyme_C	PF02775.21	gi|298675526|ref|YP_003727276.1|	-	4.3e-30	104.5	0.2	6.2e-30	104.0	0.2	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
G3P_antiterm	PF04309.12	gi|298675526|ref|YP_003727276.1|	-	0.035	13.5	0.1	0.053	12.9	0.1	1.3	1	0	0	1	1	1	0	Glycerol-3-phosphate	responsive	antiterminator
POR_N	PF01855.19	gi|298675527|ref|YP_003727277.1|	-	1.1e-54	185.7	0.0	1.5e-54	185.2	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.18	gi|298675527|ref|YP_003727277.1|	-	4.7e-38	131.0	0.1	7.8e-38	130.3	0.1	1.3	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_N	PF02776.18	gi|298675527|ref|YP_003727277.1|	-	1.6e-06	27.8	0.0	2.7e-06	27.1	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
PFOR_II	PF17147.4	gi|298675527|ref|YP_003727277.1|	-	0.0021	18.3	0.0	0.0055	17.0	0.0	1.7	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|298675527|ref|YP_003727277.1|	-	0.0095	15.8	0.0	0.02	14.8	0.0	1.5	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
UDPGT	PF00201.18	gi|298675528|ref|YP_003727278.1|	-	0.029	13.2	0.4	0.053	12.3	0.1	1.6	2	0	0	2	2	2	0	UDP-glucoronosyl	and	UDP-glucosyl	transferase
DUF4006	PF13179.6	gi|298675528|ref|YP_003727278.1|	-	0.12	12.4	0.2	0.22	11.5	0.2	1.4	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF4006)
Conotoxin	PF02950.17	gi|298675528|ref|YP_003727278.1|	-	0.12	13.4	0.1	0.28	12.2	0.1	1.6	1	0	0	1	1	1	0	Conotoxin
Flavodoxin_3	PF12641.7	gi|298675529|ref|YP_003727279.1|	-	4.7e-26	91.4	0.9	5.5e-26	91.2	0.9	1.0	1	0	0	1	1	1	1	Flavodoxin	domain
Flavodoxin_5	PF12724.7	gi|298675529|ref|YP_003727279.1|	-	9.8e-12	45.3	0.0	1.4e-11	44.8	0.0	1.4	1	1	0	1	1	1	1	Flavodoxin	domain
Flavodoxin_1	PF00258.25	gi|298675529|ref|YP_003727279.1|	-	5.9e-06	26.5	0.2	1.2e-05	25.5	0.2	1.8	1	1	0	1	1	1	1	Flavodoxin
Flavodoxin_4	PF12682.7	gi|298675529|ref|YP_003727279.1|	-	0.0027	17.4	0.1	0.069	12.9	0.0	2.2	1	1	1	2	2	2	1	Flavodoxin
Glyco_hydro_30	PF02055.16	gi|298675529|ref|YP_003727279.1|	-	0.019	13.9	0.1	0.022	13.8	0.1	1.1	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	30	TIM-barrel	domain
Flavodoxin_2	PF02525.17	gi|298675529|ref|YP_003727279.1|	-	0.053	13.2	0.0	0.15	11.8	0.0	1.9	1	1	1	2	2	2	0	Flavodoxin-like	fold
Flavodoxin_NdrI	PF07972.11	gi|298675529|ref|YP_003727279.1|	-	0.055	13.6	0.2	0.12	12.6	0.1	1.7	1	1	0	1	1	1	0	NrdI	Flavodoxin	like
AIRC	PF00731.20	gi|298675530|ref|YP_003727280.1|	-	1.9e-47	160.5	1.0	2.1e-47	160.4	1.0	1.0	1	0	0	1	1	1	1	AIR	carboxylase
CM_2	PF01817.21	gi|298675531|ref|YP_003727281.1|	-	1.1e-15	57.7	7.5	1.2e-15	57.5	7.5	1.0	1	0	0	1	1	1	1	Chorismate	mutase	type	II
FTCD_C	PF04961.12	gi|298675531|ref|YP_003727281.1|	-	0.17	11.6	3.0	0.19	11.5	3.0	1.0	1	0	0	1	1	1	0	Formiminotransferase-cyclodeaminase
TMF_TATA_bd	PF12325.8	gi|298675531|ref|YP_003727281.1|	-	0.26	11.5	6.3	0.77	10.0	6.3	1.7	1	1	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
ESM4	PF15952.5	gi|298675531|ref|YP_003727281.1|	-	0.38	11.2	2.3	0.44	11.0	2.3	1.0	1	0	0	1	1	1	0	Enhancer	of	split	M4	family
Amino_oxidase	PF01593.24	gi|298675532|ref|YP_003727282.1|	-	2e-18	66.9	0.0	4.6e-18	65.8	0.0	1.6	1	1	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.6	gi|298675532|ref|YP_003727282.1|	-	1.3e-16	60.6	0.1	2.4e-16	59.7	0.1	1.4	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|298675532|ref|YP_003727282.1|	-	1.4e-07	31.0	0.2	4.5e-07	29.3	0.3	1.7	2	0	0	2	2	2	1	FAD	binding	domain
DAO	PF01266.24	gi|298675532|ref|YP_003727282.1|	-	1.6e-07	31.3	0.1	8.3e-06	25.6	0.1	2.4	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|298675532|ref|YP_003727282.1|	-	1.9e-05	23.5	0.1	4.3e-05	22.4	0.1	1.5	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|298675532|ref|YP_003727282.1|	-	3.3e-05	23.3	0.2	4.9e-05	22.7	0.2	1.2	1	0	0	1	1	1	1	FAD	binding	domain
GIDA	PF01134.22	gi|298675532|ref|YP_003727282.1|	-	4.3e-05	22.8	1.4	0.12	11.4	0.1	3.0	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
Pyr_redox_2	PF07992.14	gi|298675532|ref|YP_003727282.1|	-	4.5e-05	22.8	0.1	0.002	17.4	0.0	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|298675532|ref|YP_003727282.1|	-	0.00013	21.4	0.1	0.0003	20.3	0.1	1.5	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.27	gi|298675532|ref|YP_003727282.1|	-	0.00018	22.0	1.3	0.0025	18.4	0.1	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.17	gi|298675532|ref|YP_003727282.1|	-	0.00024	20.4	0.1	0.00047	19.5	0.1	1.4	1	0	0	1	1	1	1	Thi4	family
GDI	PF00996.18	gi|298675532|ref|YP_003727282.1|	-	0.00048	18.8	0.2	0.00048	18.8	0.2	1.6	2	0	0	2	2	2	1	GDP	dissociation	inhibitor
Pyr_redox_3	PF13738.6	gi|298675532|ref|YP_003727282.1|	-	0.00071	18.9	1.3	0.0053	16.1	0.2	2.5	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.14	gi|298675532|ref|YP_003727282.1|	-	0.0058	15.5	0.2	0.086	11.7	0.2	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
DUF1202	PF06717.11	gi|298675532|ref|YP_003727282.1|	-	0.097	12.1	0.0	0.16	11.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1202)
UDPG_MGDP_dh_N	PF03721.14	gi|298675532|ref|YP_003727282.1|	-	0.12	11.9	0.1	0.25	10.9	0.1	1.4	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_9	PF13454.6	gi|298675532|ref|YP_003727282.1|	-	0.19	11.7	0.3	0.96	9.4	0.1	2.0	2	0	0	2	2	2	0	FAD-NAD(P)-binding
GHMP_kinases_N	PF00288.26	gi|298675533|ref|YP_003727283.1|	-	1.1e-11	44.7	2.6	3.1e-11	43.4	2.6	1.8	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|298675533|ref|YP_003727283.1|	-	0.0043	17.4	0.0	0.012	16.0	0.0	1.7	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
DUF1638	PF07796.11	gi|298675535|ref|YP_003727285.1|	-	1.1e-36	126.3	0.0	1.4e-36	126.0	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1638)
Hydant_A_N	PF05378.13	gi|298675536|ref|YP_003727286.1|	-	1.1e-31	109.9	7.3	5.7e-29	101.1	2.5	3.8	3	1	0	3	3	3	2	Hydantoinase/oxoprolinase	N-terminal	region
Hydantoinase_A	PF01968.18	gi|298675536|ref|YP_003727286.1|	-	1.6e-31	109.7	0.8	6.9e-31	107.6	0.0	2.3	2	1	0	2	2	2	1	Hydantoinase/oxoprolinase
MutL	PF13941.6	gi|298675536|ref|YP_003727286.1|	-	1.2e-05	24.1	0.9	0.038	12.6	0.1	2.5	2	0	0	2	2	2	2	MutL	protein
StbA	PF06406.11	gi|298675536|ref|YP_003727286.1|	-	0.0046	16.2	0.2	0.012	14.8	0.0	1.7	2	0	0	2	2	2	1	StbA	protein
BcrAD_BadFG	PF01869.20	gi|298675536|ref|YP_003727286.1|	-	0.0084	15.6	0.1	3.2	7.2	0.1	2.4	2	0	0	2	2	2	2	BadF/BadG/BcrA/BcrD	ATPase	family
FtsA	PF14450.6	gi|298675536|ref|YP_003727286.1|	-	0.14	12.6	0.7	2.8	8.4	0.1	2.8	2	1	1	3	3	3	0	Cell	division	protein	FtsA
DUF1638	PF07796.11	gi|298675537|ref|YP_003727287.1|	-	1.4e-40	139.0	0.0	1.7e-40	138.7	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1638)
DUF4839	PF16127.5	gi|298675537|ref|YP_003727287.1|	-	0.07	13.2	0.9	0.39	10.8	0.2	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4839)
Sulfatase	PF00884.23	gi|298675538|ref|YP_003727288.1|	-	6.6e-15	55.3	0.3	1.7e-11	44.0	0.0	2.7	2	1	0	3	3	3	2	Sulfatase
Phosphodiest	PF01663.22	gi|298675538|ref|YP_003727288.1|	-	1.6e-13	51.0	0.8	3.7e-06	26.8	0.1	2.1	1	1	1	2	2	2	2	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Metalloenzyme	PF01676.18	gi|298675538|ref|YP_003727288.1|	-	2.4e-07	30.4	0.3	5.9e-06	25.8	0.3	2.2	2	0	0	2	2	2	1	Metalloenzyme	superfamily
PglZ	PF08665.12	gi|298675538|ref|YP_003727288.1|	-	0.0063	16.6	0.7	0.53	10.4	0.7	2.4	1	1	0	1	1	1	1	PglZ	domain
Elong_Iki1	PF10483.9	gi|298675538|ref|YP_003727288.1|	-	0.014	14.9	0.2	0.066	12.7	0.0	2.0	2	0	0	2	2	2	0	Elongator	subunit	Iki1
Alk_phosphatase	PF00245.20	gi|298675538|ref|YP_003727288.1|	-	0.045	12.7	0.2	2.9	6.7	0.0	2.6	2	1	1	3	3	3	0	Alkaline	phosphatase
DAP3	PF10236.9	gi|298675538|ref|YP_003727288.1|	-	0.053	12.7	0.1	0.16	11.1	0.1	1.8	1	1	1	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
SdrD_B	PF17210.3	gi|298675539|ref|YP_003727289.1|	-	4e-185	603.5	54.0	2e-40	137.5	5.1	5.6	6	0	0	6	6	6	5	SdrD	B-like	domain
CarboxypepD_reg	PF13620.6	gi|298675539|ref|YP_003727289.1|	-	1.7e-37	127.5	20.4	8.9e-09	35.5	0.9	6.0	5	0	0	5	5	5	5	Carboxypeptidase	regulatory-like	domain
bMG3	PF11974.8	gi|298675539|ref|YP_003727289.1|	-	9.6e-24	83.4	0.0	0.00079	19.4	0.0	5.4	5	0	0	5	5	5	5	Bacterial	alpha-2-macroglobulin	MG3	domain
SpaA	PF17802.1	gi|298675539|ref|YP_003727289.1|	-	1.6e-14	54.0	45.3	0.00087	19.6	0.6	7.4	2	1	4	6	6	6	5	Prealbumin-like	fold	domain
CarbopepD_reg_2	PF13715.6	gi|298675539|ref|YP_003727289.1|	-	1e-10	41.5	19.2	0.037	14.0	0.3	5.6	5	0	0	5	5	5	5	CarboxypepD_reg-like	domain
MetallophosN	PF16371.5	gi|298675539|ref|YP_003727289.1|	-	1e-09	38.5	23.7	0.021	15.0	0.2	6.0	6	0	0	6	6	5	4	N	terminal	of	Calcineurin-like	phosphoesterase
TTR-52	PF01060.23	gi|298675539|ref|YP_003727289.1|	-	1.9e-07	31.7	0.2	4.8	7.9	0.0	5.7	5	0	0	5	5	5	1	Transthyretin-like	family
fn3	PF00041.21	gi|298675539|ref|YP_003727289.1|	-	2e-05	24.9	12.6	0.82	10.0	0.1	5.6	5	0	0	5	5	5	2	Fibronectin	type	III	domain
Y_Y_Y	PF07495.13	gi|298675539|ref|YP_003727289.1|	-	0.0019	18.1	12.1	0.41	10.6	0.3	4.1	3	0	0	3	3	3	2	Y_Y_Y	domain
DUF11	PF01345.18	gi|298675539|ref|YP_003727289.1|	-	0.014	15.7	3.5	0.014	15.7	3.5	3.7	4	1	0	4	4	3	0	Domain	of	unknown	function	DUF11
DUF2861	PF11060.8	gi|298675539|ref|YP_003727289.1|	-	0.015	14.9	0.0	3.9	7.0	0.0	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2861)
EMP24_GP25L	PF01105.24	gi|298675539|ref|YP_003727289.1|	-	0.017	15.1	8.5	5.4	6.9	0.0	4.4	5	1	0	5	5	5	0	emp24/gp25L/p24	family/GOLD
MoaF	PF10703.9	gi|298675539|ref|YP_003727289.1|	-	0.056	13.4	0.0	18	5.3	0.0	3.4	3	0	0	3	3	3	0	MoaF	N-terminal	domain
FlgD_ig	PF13860.6	gi|298675539|ref|YP_003727289.1|	-	0.097	12.6	2.1	2.8	7.9	0.1	4.4	4	0	0	4	4	4	0	FlgD	Ig-like	domain
DUF1380	PF07128.12	gi|298675539|ref|YP_003727289.1|	-	0.11	12.6	0.0	4.2	7.6	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1380)
fn3_3	PF14686.6	gi|298675539|ref|YP_003727289.1|	-	0.2	11.4	7.8	13	5.7	0.2	5.2	5	0	0	5	5	5	0	Polysaccharide	lyase	family	4,	domain	II
HSP20	PF00011.21	gi|298675540|ref|YP_003727290.1|	-	0.00014	21.9	0.2	0.00038	20.5	0.2	1.7	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
PIH1_CS	PF18201.1	gi|298675540|ref|YP_003727290.1|	-	0.0005	20.4	0.3	0.00056	20.3	0.3	1.0	1	0	0	1	1	1	1	PIH1	CS-like	domain
ArsA_HSP20	PF17886.1	gi|298675540|ref|YP_003727290.1|	-	0.001	18.6	0.0	0.002	17.6	0.0	1.5	2	0	0	2	2	2	1	HSP20-like	domain	found	in	ArsA
CS	PF04969.16	gi|298675540|ref|YP_003727290.1|	-	0.0012	19.8	0.1	0.0015	19.5	0.1	1.2	1	0	0	1	1	1	1	CS	domain
UPF0167	PF03691.14	gi|298675541|ref|YP_003727291.1|	-	0.0083	15.9	0.6	0.015	15.1	0.6	1.5	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0167)
DUF1910	PF08928.10	gi|298675541|ref|YP_003727291.1|	-	0.035	14.1	0.7	0.087	12.8	0.7	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1910)
Mob_synth_C	PF06463.13	gi|298675541|ref|YP_003727291.1|	-	0.039	13.9	0.2	0.065	13.2	0.2	1.4	1	0	0	1	1	1	0	Molybdenum	Cofactor	Synthesis	C
BKACE	PF05853.12	gi|298675541|ref|YP_003727291.1|	-	0.24	10.7	0.0	0.28	10.5	0.0	1.1	1	0	0	1	1	1	0	beta-keto	acid	cleavage	enzyme
TRAM	PF01938.20	gi|298675542|ref|YP_003727292.1|	-	1e-14	54.2	0.8	1.1e-14	54.1	0.8	1.0	1	0	0	1	1	1	1	TRAM	domain
Na_Ca_ex	PF01699.24	gi|298675543|ref|YP_003727293.1|	-	5.9e-56	188.6	40.4	4.5e-30	104.6	16.5	2.0	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
CrgA	PF06781.12	gi|298675543|ref|YP_003727293.1|	-	0.012	15.6	0.1	0.24	11.5	0.0	2.8	2	0	0	2	2	2	0	Cell	division	protein	CrgA
Wzy_C	PF04932.15	gi|298675543|ref|YP_003727293.1|	-	4.6	6.9	18.4	0.97	9.1	3.7	3.1	2	1	0	2	2	2	0	O-Antigen	ligase
Flg_bb_rod	PF00460.20	gi|298675543|ref|YP_003727293.1|	-	7.4	6.6	7.3	28	4.8	0.2	2.5	2	0	0	2	2	2	0	Flagella	basal	body	rod	protein
UPF0016	PF01169.19	gi|298675544|ref|YP_003727294.1|	-	2.7e-35	120.5	16.5	4.2e-18	65.4	3.7	2.1	2	0	0	2	2	2	2	Uncharacterized	protein	family	UPF0016
TauE	PF01925.19	gi|298675544|ref|YP_003727294.1|	-	0.0046	16.6	10.2	0.087	12.4	2.2	2.2	2	0	0	2	2	2	2	Sulfite	exporter	TauE/SafE
DsbD_2	PF13386.6	gi|298675544|ref|YP_003727294.1|	-	0.13	12.2	9.7	0.82	9.6	0.5	2.1	1	1	1	2	2	2	0	Cytochrome	C	biogenesis	protein	transmembrane	region
MoaE	PF02391.17	gi|298675545|ref|YP_003727295.1|	-	1.7e-25	89.5	0.2	3.3e-25	88.6	0.2	1.5	1	0	0	1	1	1	1	MoaE	protein
MobB	PF03205.14	gi|298675545|ref|YP_003727295.1|	-	2.4e-16	59.8	0.2	5.2e-16	58.8	0.2	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_14	PF13173.6	gi|298675545|ref|YP_003727295.1|	-	0.00013	22.0	0.0	0.00038	20.5	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|298675545|ref|YP_003727295.1|	-	0.00094	19.6	0.0	0.0018	18.6	0.0	1.5	2	0	0	2	2	2	1	AAA	ATPase	domain
GTP_EFTU	PF00009.27	gi|298675545|ref|YP_003727295.1|	-	0.0021	17.6	1.7	0.0033	17.0	0.4	1.9	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
MMR_HSR1	PF01926.23	gi|298675545|ref|YP_003727295.1|	-	0.0038	17.3	2.1	0.0054	16.8	0.6	2.1	1	1	1	2	2	2	1	50S	ribosome-binding	GTPase
AAA_22	PF13401.6	gi|298675545|ref|YP_003727295.1|	-	0.013	15.8	0.0	0.035	14.4	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
Roc	PF08477.13	gi|298675545|ref|YP_003727295.1|	-	0.027	14.7	2.7	0.33	11.2	0.6	2.8	2	1	1	3	3	3	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
ABC_tran	PF00005.27	gi|298675545|ref|YP_003727295.1|	-	0.028	15.0	0.3	0.053	14.0	0.3	1.7	1	1	0	1	1	1	0	ABC	transporter
SRPRB	PF09439.10	gi|298675545|ref|YP_003727295.1|	-	0.028	13.8	0.5	0.11	12.0	0.3	2.0	2	1	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
RNA_helicase	PF00910.22	gi|298675545|ref|YP_003727295.1|	-	0.059	13.8	0.0	0.14	12.5	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
AAA_18	PF13238.6	gi|298675545|ref|YP_003727295.1|	-	0.059	13.9	0.3	0.6	10.7	0.1	2.3	1	1	1	2	2	2	0	AAA	domain
LAL_C2	PF18603.1	gi|298675545|ref|YP_003727295.1|	-	0.068	13.3	0.1	0.31	11.2	0.1	2.1	1	1	0	1	1	1	0	L-amino	acid	ligase	C-terminal	domain	2
AAA_33	PF13671.6	gi|298675545|ref|YP_003727295.1|	-	0.16	12.1	0.0	0.37	10.9	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
CbiA	PF01656.23	gi|298675545|ref|YP_003727295.1|	-	1.6	8.8	3.7	68	3.5	3.7	2.6	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DUF11	PF01345.18	gi|298675546|ref|YP_003727296.1|	-	0.00011	22.4	8.6	0.052	13.9	0.8	3.1	2	1	0	2	2	2	2	Domain	of	unknown	function	DUF11
CARDB	PF07705.11	gi|298675546|ref|YP_003727296.1|	-	0.012	15.9	14.5	0.48	10.7	1.5	3.2	3	0	0	3	3	3	0	CARDB
N_BRCA1_IG	PF16158.5	gi|298675546|ref|YP_003727296.1|	-	0.45	11.3	2.5	23	5.8	0.1	2.9	3	0	0	3	3	3	0	Ig-like	domain	from	next	to	BRCA1	gene
TRAP_beta	PF05753.14	gi|298675546|ref|YP_003727296.1|	-	1.7	8.0	5.0	2.6	7.4	1.0	2.4	2	0	0	2	2	2	0	Translocon-associated	protein	beta	(TRAPB)
Spore_coat_CotO	PF14153.6	gi|298675547|ref|YP_003727297.1|	-	0.011	15.7	0.0	0.012	15.6	0.0	1.0	1	0	0	1	1	1	0	Spore	coat	protein	CotO
Kringle	PF00051.18	gi|298675547|ref|YP_003727297.1|	-	0.064	13.6	0.0	0.075	13.4	0.0	1.1	1	0	0	1	1	1	0	Kringle	domain
SH3_19	PF18597.1	gi|298675547|ref|YP_003727297.1|	-	0.12	12.2	0.0	0.14	12.0	0.0	1.2	1	0	0	1	1	1	0	Myosin	X	N-terminal	SH3	domain
Peptidase_M22	PF00814.25	gi|298675548|ref|YP_003727298.1|	-	1.1e-87	294.2	0.0	1.2e-87	294.0	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
CheD	PF03975.13	gi|298675548|ref|YP_003727298.1|	-	0.00044	20.3	0.1	0.027	14.6	0.0	2.3	2	0	0	2	2	2	1	CheD	chemotactic	sensory	transduction
Carbam_trans_N	PF02543.15	gi|298675548|ref|YP_003727298.1|	-	0.0061	16.3	0.0	0.019	14.6	0.0	1.7	2	0	0	2	2	2	1	Carbamoyltransferase	N-terminus
APH	PF01636.23	gi|298675549|ref|YP_003727299.1|	-	1.5e-09	38.1	0.1	1e-05	25.6	0.1	2.1	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
RIO1	PF01163.22	gi|298675549|ref|YP_003727299.1|	-	5.4e-09	35.9	0.0	8.2e-09	35.3	0.0	1.3	1	0	0	1	1	1	1	RIO1	family
Pkinase	PF00069.25	gi|298675549|ref|YP_003727299.1|	-	1.5e-05	24.5	0.3	3.7e-05	23.2	0.3	1.7	1	1	0	1	1	1	1	Protein	kinase	domain
Kdo	PF06293.14	gi|298675549|ref|YP_003727299.1|	-	3.3e-05	23.3	0.0	0.0056	16.0	0.0	2.2	1	1	1	2	2	2	2	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Choline_kinase	PF01633.20	gi|298675549|ref|YP_003727299.1|	-	0.0024	17.5	0.1	0.43	10.1	0.0	2.4	1	1	1	2	2	2	2	Choline/ethanolamine	kinase
WaaY	PF06176.11	gi|298675549|ref|YP_003727299.1|	-	0.018	14.7	0.1	0.033	13.8	0.1	1.6	1	1	0	1	1	1	0	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
Pkinase_Tyr	PF07714.17	gi|298675549|ref|YP_003727299.1|	-	0.024	13.9	0.0	0.032	13.5	0.0	1.5	1	1	0	1	1	1	0	Protein	tyrosine	kinase
Ham1p_like	PF01725.16	gi|298675550|ref|YP_003727300.1|	-	5.7e-54	182.9	0.0	6.4e-54	182.7	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
MutL	PF13941.6	gi|298675550|ref|YP_003727300.1|	-	0.059	12.0	0.0	0.077	11.6	0.0	1.1	1	0	0	1	1	1	0	MutL	protein
Cyclase	PF04199.13	gi|298675551|ref|YP_003727301.1|	-	7e-27	94.3	0.0	8.8e-27	94.0	0.0	1.1	1	0	0	1	1	1	1	Putative	cyclase
PHP	PF02811.19	gi|298675552|ref|YP_003727302.1|	-	2.2e-10	41.1	0.1	2.4e-10	40.9	0.1	1.3	1	1	0	1	1	1	1	PHP	domain
RNase_P_p30	PF01876.16	gi|298675552|ref|YP_003727302.1|	-	1.8e-06	27.6	0.1	3.2e-06	26.8	0.1	1.4	1	0	0	1	1	1	1	RNase	P	subunit	p30
Imp-YgjV	PF10688.9	gi|298675553|ref|YP_003727303.1|	-	2.3e-06	27.5	2.2	3e-06	27.1	2.2	1.2	1	0	0	1	1	1	1	Bacterial	inner	membrane	protein
MtN3_slv	PF03083.16	gi|298675553|ref|YP_003727303.1|	-	0.014	15.4	1.5	0.027	14.5	1.5	1.4	1	0	0	1	1	1	0	Sugar	efflux	transporter	for	intercellular	exchange
Pox_D5	PF03288.16	gi|298675553|ref|YP_003727303.1|	-	0.089	13.3	0.9	0.43	11.1	0.9	2.1	1	1	1	2	2	2	0	Poxvirus	D5	protein-like
Peptidase_M50	PF02163.22	gi|298675554|ref|YP_003727304.1|	-	5.2e-24	84.9	0.0	2.2e-23	82.8	0.0	1.9	1	1	0	1	1	1	1	Peptidase	family	M50
PDZ_2	PF13180.6	gi|298675554|ref|YP_003727304.1|	-	1.4e-23	83.0	2.7	1.2e-11	44.8	0.9	2.3	1	1	1	2	2	2	2	PDZ	domain
PDZ_6	PF17820.1	gi|298675554|ref|YP_003727304.1|	-	1.5e-15	56.7	0.0	1.7e-07	31.0	0.0	2.6	3	0	0	3	3	3	2	PDZ	domain
PDZ	PF00595.24	gi|298675554|ref|YP_003727304.1|	-	6.9e-13	48.8	4.7	1.1e-07	32.1	0.3	2.5	2	0	0	2	2	2	2	PDZ	domain
PDZ_1	PF12812.7	gi|298675554|ref|YP_003727304.1|	-	2e-05	24.5	1.9	0.2	11.7	0.1	2.4	2	0	0	2	2	2	2	PDZ-like	domain
Tricorn_PDZ	PF14685.6	gi|298675554|ref|YP_003727304.1|	-	2.1e-05	24.4	1.6	0.042	13.8	0.1	2.3	1	1	1	2	2	2	2	Tricorn	protease	PDZ	domain
GRASP55_65	PF04495.14	gi|298675554|ref|YP_003727304.1|	-	0.0018	18.6	0.2	0.16	12.3	0.0	2.5	1	1	1	2	2	2	1	GRASP55/65	PDZ-like	domain
DUF3394	PF11874.8	gi|298675554|ref|YP_003727304.1|	-	0.064	12.9	3.2	1.5	8.5	0.1	3.2	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3394)
CutA1	PF03091.15	gi|298675555|ref|YP_003727305.1|	-	1.4e-34	117.9	0.4	1.6e-34	117.7	0.4	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
DUF4873	PF16170.5	gi|298675555|ref|YP_003727305.1|	-	0.12	12.6	0.0	0.14	12.4	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4873)
Fumerase	PF05681.14	gi|298675556|ref|YP_003727306.1|	-	4.1e-95	318.3	0.0	4.7e-95	318.1	0.0	1.0	1	0	0	1	1	1	1	Fumarate	hydratase	(Fumerase)
Fumerase_C	PF05683.12	gi|298675557|ref|YP_003727307.1|	-	9.8e-46	155.7	0.0	1.2e-45	155.4	0.0	1.0	1	0	0	1	1	1	1	Fumarase	C-terminus
Ribo_biogen_C	PF04034.13	gi|298675558|ref|YP_003727308.1|	-	1.5e-48	163.7	0.0	2.1e-48	163.3	0.0	1.2	1	0	0	1	1	1	1	Ribosome	biogenesis	protein,	C-terminal
RLI	PF04068.15	gi|298675558|ref|YP_003727308.1|	-	1.6e-11	43.8	0.3	2.5e-11	43.2	0.3	1.3	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
RNA_Me_trans	PF04252.13	gi|298675558|ref|YP_003727308.1|	-	0.024	14.2	0.0	0.034	13.7	0.0	1.3	1	0	0	1	1	1	0	Predicted	SAM-dependent	RNA	methyltransferase
OrfB_IS605	PF01385.19	gi|298675559|ref|YP_003727309.1|	-	2.5e-26	92.3	1.8	2.5e-26	92.3	1.8	1.8	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675559|ref|YP_003727309.1|	-	7e-24	83.5	0.4	1.4e-23	82.5	0.4	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298675559|ref|YP_003727309.1|	-	2.8e-19	68.3	1.0	6.2e-19	67.2	1.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298675559|ref|YP_003727309.1|	-	0.0069	16.5	0.3	0.016	15.4	0.3	1.5	1	0	0	1	1	1	1	Piccolo	Zn-finger
MapZ_EC1	PF18041.1	gi|298675559|ref|YP_003727309.1|	-	0.015	15.6	5.5	0.2	11.9	1.2	2.4	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
LemA	PF04011.12	gi|298675559|ref|YP_003727309.1|	-	0.033	14.1	0.7	0.31	10.9	0.1	2.3	2	1	0	2	2	2	0	LemA	family
Phage_GP20	PF06810.11	gi|298675559|ref|YP_003727309.1|	-	0.084	12.7	6.9	0.28	11.0	1.7	2.4	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
HypA	PF01155.19	gi|298675559|ref|YP_003727309.1|	-	0.33	11.0	1.9	0.61	10.1	0.6	2.0	2	1	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DivIC	PF04977.15	gi|298675559|ref|YP_003727309.1|	-	2.4	8.0	5.7	21	5.0	1.0	2.9	2	1	0	2	2	2	0	Septum	formation	initiator
Ima1_N	PF09779.9	gi|298675559|ref|YP_003727309.1|	-	3.8	8.4	6.1	1.4	9.7	0.4	2.5	2	1	1	3	3	3	0	Ima1	N-terminal	domain
Ferritin	PF00210.24	gi|298675560|ref|YP_003727310.1|	-	3.2e-23	82.3	0.0	3.8e-23	82.0	0.0	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
Ferritin_2	PF13668.6	gi|298675560|ref|YP_003727310.1|	-	0.0032	17.7	0.0	0.0042	17.3	0.0	1.2	1	0	0	1	1	1	1	Ferritin-like	domain
Zip	PF02535.22	gi|298675561|ref|YP_003727311.1|	-	1.1e-17	64.3	17.3	2.8e-12	46.5	10.0	2.2	1	1	1	2	2	2	2	ZIP	Zinc	transporter
ABC_tran	PF00005.27	gi|298675562|ref|YP_003727312.1|	-	3.9e-35	121.4	0.0	6.2e-35	120.7	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675562|ref|YP_003727312.1|	-	1.6e-10	41.3	3.0	1.3e-06	28.4	0.2	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|298675562|ref|YP_003727312.1|	-	8.4e-07	29.7	1.7	1.3e-06	29.1	1.7	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|298675562|ref|YP_003727312.1|	-	1.2e-05	25.3	2.8	0.014	15.1	1.3	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.19	gi|298675562|ref|YP_003727312.1|	-	0.00022	20.7	0.3	0.00032	20.2	0.3	1.3	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Rad17	PF03215.15	gi|298675562|ref|YP_003727312.1|	-	0.0006	19.8	0.1	0.00094	19.2	0.1	1.4	1	0	0	1	1	1	1	Rad17	P-loop	domain
AAA	PF00004.29	gi|298675562|ref|YP_003727312.1|	-	0.00087	19.7	0.5	0.0067	16.8	0.5	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.6	gi|298675562|ref|YP_003727312.1|	-	0.0011	18.7	0.2	0.0022	17.7	0.2	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|298675562|ref|YP_003727312.1|	-	0.0034	17.3	1.0	0.015	15.3	0.0	2.2	2	1	1	3	3	3	1	RsgA	GTPase
AAA_22	PF13401.6	gi|298675562|ref|YP_003727312.1|	-	0.0036	17.6	0.3	0.015	15.6	0.3	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.6	gi|298675562|ref|YP_003727312.1|	-	0.011	14.4	0.2	0.88	8.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.22	gi|298675562|ref|YP_003727312.1|	-	0.024	14.3	0.4	0.088	12.4	0.1	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
TNT	PF14021.6	gi|298675562|ref|YP_003727312.1|	-	0.035	14.7	0.0	0.088	13.4	0.0	1.7	1	0	0	1	1	1	0	Tuberculosis	necrotizing	toxin
AAA_30	PF13604.6	gi|298675562|ref|YP_003727312.1|	-	0.035	13.8	0.0	0.055	13.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_27	PF13514.6	gi|298675562|ref|YP_003727312.1|	-	0.055	13.1	0.0	0.079	12.5	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|298675562|ref|YP_003727312.1|	-	0.21	11.8	0.3	1.7	8.9	0.1	2.4	2	1	1	3	3	3	0	AAA	domain
ABC2_membrane	PF01061.24	gi|298675563|ref|YP_003727313.1|	-	3.2e-37	128.0	14.3	3.2e-37	128.0	14.3	1.7	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|298675563|ref|YP_003727313.1|	-	1.3e-13	50.8	23.9	1.7e-13	50.4	23.9	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|298675563|ref|YP_003727313.1|	-	1.6e-08	34.2	10.2	1.6e-08	34.2	10.2	2.0	1	1	1	2	2	2	2	ABC-2	family	transporter	protein
OTCace_N	PF02729.21	gi|298675564|ref|YP_003727314.1|	-	3.8e-48	163.3	0.0	6.8e-48	162.4	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.24	gi|298675564|ref|YP_003727314.1|	-	6.5e-33	114.0	0.0	9.3e-33	113.5	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
PyrI	PF01948.18	gi|298675565|ref|YP_003727315.1|	-	1.9e-30	104.9	2.9	2.7e-30	104.4	2.9	1.2	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.15	gi|298675565|ref|YP_003727315.1|	-	1.1e-16	60.5	11.0	1.1e-16	60.4	8.8	2.0	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
TF_Zn_Ribbon	PF08271.12	gi|298675565|ref|YP_003727315.1|	-	0.02	14.4	0.1	0.041	13.4	0.1	1.5	1	0	0	1	1	1	0	TFIIB	zinc-binding
DapB_C	PF05173.14	gi|298675566|ref|YP_003727316.1|	-	5.9e-46	155.4	0.1	8.3e-46	155.0	0.1	1.2	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	C-terminus
DapB_N	PF01113.20	gi|298675566|ref|YP_003727316.1|	-	4.4e-34	117.3	0.9	6.9e-34	116.6	0.9	1.3	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
DUF166	PF02593.14	gi|298675566|ref|YP_003727316.1|	-	0.029	13.9	0.0	0.047	13.2	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function
ABC_transp_aux	PF09822.9	gi|298675566|ref|YP_003727316.1|	-	0.031	13.8	0.0	0.041	13.3	0.0	1.2	1	0	0	1	1	1	0	ABC-type	uncharacterized	transport	system
DHDPS	PF00701.22	gi|298675567|ref|YP_003727317.1|	-	1.2e-93	313.0	0.4	1.4e-93	312.8	0.4	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
GDC-P	PF02347.16	gi|298675567|ref|YP_003727317.1|	-	0.12	11.1	0.0	0.16	10.7	0.0	1.1	1	0	0	1	1	1	0	Glycine	cleavage	system	P-protein
Ribosomal_S17e	PF00833.18	gi|298675568|ref|YP_003727318.1|	-	2.1e-13	50.3	3.1	2.3e-13	50.1	3.1	1.0	1	0	0	1	1	1	1	Ribosomal	S17
PNPase	PF03726.14	gi|298675568|ref|YP_003727318.1|	-	0.015	15.7	0.5	0.019	15.5	0.5	1.1	1	0	0	1	1	1	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
DUF620	PF04788.12	gi|298675568|ref|YP_003727318.1|	-	0.072	12.5	0.1	0.076	12.4	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF620)
DUF5317	PF17248.2	gi|298675569|ref|YP_003727319.1|	-	0.17	11.9	2.8	0.24	11.4	2.8	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5317)
DUF2070	PF09843.9	gi|298675569|ref|YP_003727319.1|	-	0.46	8.7	3.1	0.51	8.6	3.1	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
YiaAB	PF05360.14	gi|298675569|ref|YP_003727319.1|	-	7	7.0	8.1	2.4	8.5	0.2	2.9	2	1	1	3	3	3	0	yiaA/B	two	helix	domain
IMS	PF00817.20	gi|298675570|ref|YP_003727320.1|	-	6.7e-51	172.2	0.0	9.9e-51	171.7	0.0	1.3	1	0	0	1	1	1	1	impB/mucB/samB	family
IMS_C	PF11799.8	gi|298675570|ref|YP_003727320.1|	-	2e-18	67.2	0.0	3.6e-18	66.4	0.0	1.4	1	0	0	1	1	1	1	impB/mucB/samB	family	C-terminal	domain
IMS_HHH	PF11798.8	gi|298675570|ref|YP_003727320.1|	-	2.4e-09	37.0	0.0	6.7e-09	35.6	0.0	1.8	1	0	0	1	1	1	1	IMS	family	HHH	motif
Cdd1	PF11731.8	gi|298675570|ref|YP_003727320.1|	-	0.0039	17.4	0.0	0.014	15.7	0.0	1.9	1	0	0	1	1	1	1	Pathogenicity	locus
DNA_pol_lambd_f	PF10391.9	gi|298675570|ref|YP_003727320.1|	-	0.11	12.4	0.0	0.23	11.3	0.0	1.6	1	0	0	1	1	1	0	Fingers	domain	of	DNA	polymerase	lambda
HHH_5	PF14520.6	gi|298675570|ref|YP_003727320.1|	-	0.11	13.1	0.2	0.46	11.1	0.0	2.2	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
DUF1624	PF07786.12	gi|298675571|ref|YP_003727321.1|	-	3.6e-71	239.3	21.0	4.2e-71	239.1	21.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1624)
Acyl_transf_3	PF01757.22	gi|298675571|ref|YP_003727321.1|	-	4.2e-06	26.1	39.0	0.0034	16.5	23.5	2.4	1	1	1	2	2	2	2	Acyltransferase	family
OpgC_C	PF10129.9	gi|298675571|ref|YP_003727321.1|	-	0.00031	19.7	10.6	0.0021	17.0	6.9	2.3	2	1	0	2	2	2	2	OpgC	protein
DUF2072	PF09845.9	gi|298675572|ref|YP_003727322.1|	-	3.7e-47	159.9	0.5	4.3e-47	159.7	0.5	1.0	1	0	0	1	1	1	1	Zn-ribbon	containing	protein
Rho_GDI	PF02115.17	gi|298675572|ref|YP_003727322.1|	-	0.0027	17.5	0.3	0.0035	17.1	0.3	1.0	1	0	0	1	1	1	1	RHO	protein	GDP	dissociation	inhibitor
Spt4	PF06093.13	gi|298675572|ref|YP_003727322.1|	-	0.07	13.2	0.5	0.35	11.0	0.5	2.0	2	0	0	2	2	2	0	Spt4/RpoE2	zinc	finger
Zn-ribbon_8	PF09723.10	gi|298675572|ref|YP_003727322.1|	-	0.07	13.3	1.1	0.19	11.9	1.1	1.7	1	0	0	1	1	1	0	Zinc	ribbon	domain
Prok-RING_1	PF14446.6	gi|298675572|ref|YP_003727322.1|	-	0.071	13.1	0.8	0.12	12.4	0.8	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
PNP_UDP_1	PF01048.20	gi|298675573|ref|YP_003727323.1|	-	5.2e-44	150.2	0.0	6e-44	150.0	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
DUF2209	PF09974.9	gi|298675573|ref|YP_003727323.1|	-	0.092	13.1	0.6	0.22	11.9	0.6	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2209)
Pribosyltran	PF00156.27	gi|298675574|ref|YP_003727324.1|	-	4.1e-19	68.7	0.0	5.5e-19	68.2	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|298675574|ref|YP_003727324.1|	-	0.2	11.1	0.0	0.3	10.5	0.0	1.3	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
SRP54	PF00448.22	gi|298675575|ref|YP_003727325.1|	-	2.1e-71	239.7	0.3	5.7e-71	238.2	0.0	1.8	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.19	gi|298675575|ref|YP_003727325.1|	-	3.4e-28	98.2	4.2	3.4e-28	98.2	4.2	2.6	3	0	0	3	3	2	1	Signal	peptide	binding	domain
SRP54_N	PF02881.19	gi|298675575|ref|YP_003727325.1|	-	1.4e-20	73.3	2.4	2.6e-20	72.4	1.0	2.3	2	0	0	2	2	1	1	SRP54-type	protein,	helical	bundle	domain
cobW	PF02492.19	gi|298675575|ref|YP_003727325.1|	-	2.6e-06	27.1	0.7	5.3e-05	22.9	0.7	2.3	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
CbiA	PF01656.23	gi|298675575|ref|YP_003727325.1|	-	4.9e-06	26.6	0.0	1.5e-05	25.1	0.0	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
6PF2K	PF01591.18	gi|298675575|ref|YP_003727325.1|	-	0.00022	20.6	0.0	0.00049	19.5	0.0	1.5	1	0	0	1	1	1	1	6-phosphofructo-2-kinase
Zeta_toxin	PF06414.12	gi|298675575|ref|YP_003727325.1|	-	0.00037	19.8	0.0	0.00088	18.6	0.0	1.7	1	0	0	1	1	1	1	Zeta	toxin
AAA_24	PF13479.6	gi|298675575|ref|YP_003727325.1|	-	0.00066	19.5	0.0	0.0014	18.4	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
MeaB	PF03308.16	gi|298675575|ref|YP_003727325.1|	-	0.0026	16.8	0.1	0.029	13.4	0.0	2.2	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
APS_kinase	PF01583.20	gi|298675575|ref|YP_003727325.1|	-	0.0028	17.5	0.0	0.0068	16.3	0.0	1.6	1	0	0	1	1	1	1	Adenylylsulphate	kinase
TrwB_AAD_bind	PF10412.9	gi|298675575|ref|YP_003727325.1|	-	0.0037	16.2	0.0	0.0064	15.5	0.0	1.3	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Thymidylate_kin	PF02223.17	gi|298675575|ref|YP_003727325.1|	-	0.0057	16.4	0.6	0.042	13.5	0.1	2.5	2	0	0	2	2	2	1	Thymidylate	kinase
AAA_18	PF13238.6	gi|298675575|ref|YP_003727325.1|	-	0.0062	17.1	0.2	0.024	15.2	0.0	2.2	2	1	0	2	2	1	1	AAA	domain
ATP_bind_1	PF03029.17	gi|298675575|ref|YP_003727325.1|	-	0.0062	16.3	0.2	0.029	14.2	0.0	2.2	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
TFIIA_gamma_N	PF02268.16	gi|298675575|ref|YP_003727325.1|	-	0.007	16.3	0.0	0.028	14.4	0.0	2.0	1	0	0	1	1	1	1	Transcription	initiation	factor	IIA,	gamma	subunit,	helical	domain
AAA_33	PF13671.6	gi|298675575|ref|YP_003727325.1|	-	0.01	16.0	0.0	0.019	15.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|298675575|ref|YP_003727325.1|	-	0.015	15.6	0.1	0.068	13.5	0.0	2.1	2	0	0	2	2	1	0	AAA	domain
MobB	PF03205.14	gi|298675575|ref|YP_003727325.1|	-	0.015	15.2	0.1	0.032	14.1	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KTI12	PF08433.10	gi|298675575|ref|YP_003727325.1|	-	0.019	14.4	0.0	0.042	13.3	0.0	1.6	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
SRPRB	PF09439.10	gi|298675575|ref|YP_003727325.1|	-	0.028	13.8	0.2	4.6	6.6	0.0	2.5	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
AAA_16	PF13191.6	gi|298675575|ref|YP_003727325.1|	-	0.028	14.8	0.0	0.073	13.5	0.0	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
LpxK	PF02606.14	gi|298675575|ref|YP_003727325.1|	-	0.029	13.5	0.1	0.056	12.5	0.1	1.4	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
T3SS_HrpK1	PF16937.5	gi|298675575|ref|YP_003727325.1|	-	0.032	13.9	0.0	0.057	13.1	0.0	1.4	1	0	0	1	1	1	0	Type	III	secretion	system	translocator	protein,	HrpF
AAA_19	PF13245.6	gi|298675575|ref|YP_003727325.1|	-	0.033	14.5	0.1	0.055	13.8	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
Cullin	PF00888.22	gi|298675575|ref|YP_003727325.1|	-	0.035	12.7	2.4	0.034	12.8	0.5	1.7	2	0	0	2	2	2	0	Cullin	family
AAA_30	PF13604.6	gi|298675575|ref|YP_003727325.1|	-	0.047	13.4	0.1	0.25	11.0	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_31	PF13614.6	gi|298675575|ref|YP_003727325.1|	-	0.056	13.4	0.6	0.65	9.9	0.0	2.9	4	0	0	4	4	3	0	AAA	domain
PRK	PF00485.18	gi|298675575|ref|YP_003727325.1|	-	0.094	12.4	0.1	0.46	10.2	0.0	2.0	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
G-alpha	PF00503.20	gi|298675575|ref|YP_003727325.1|	-	0.1	11.7	0.0	0.2	10.8	0.0	1.6	1	1	0	1	1	1	0	G-protein	alpha	subunit
AAA_28	PF13521.6	gi|298675575|ref|YP_003727325.1|	-	0.11	12.7	0.0	0.27	11.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.15	gi|298675575|ref|YP_003727325.1|	-	0.11	12.4	0.8	1.2	9.0	0.1	2.5	2	0	0	2	2	2	0	NTPase
IstB_IS21	PF01695.17	gi|298675575|ref|YP_003727325.1|	-	0.11	12.2	0.2	2.5	7.8	0.1	2.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
MMR_HSR1	PF01926.23	gi|298675575|ref|YP_003727325.1|	-	0.12	12.5	1.5	0.39	10.8	0.3	2.4	2	1	0	2	2	1	0	50S	ribosome-binding	GTPase
Tape_meas_lam_C	PF09718.10	gi|298675575|ref|YP_003727325.1|	-	0.24	11.5	1.5	20	5.4	0.3	2.7	2	0	0	2	2	2	0	Lambda	phage	tail	tape-measure	protein	(Tape_meas_lam_C)
AAA_17	PF13207.6	gi|298675575|ref|YP_003727325.1|	-	0.37	11.2	3.8	0.46	10.9	0.4	2.9	3	1	0	3	3	2	0	AAA	domain
GATase	PF00117.28	gi|298675576|ref|YP_003727326.1|	-	1.7e-34	119.3	0.0	2.1e-34	119.0	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|298675576|ref|YP_003727326.1|	-	1.4e-11	44.5	0.5	2.1e-10	40.7	0.2	2.5	2	1	0	2	2	2	1	Peptidase	C26
DeoC	PF01791.9	gi|298675577|ref|YP_003727327.1|	-	1.7e-63	214.4	0.0	2e-63	214.2	0.0	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DHQS	PF01959.16	gi|298675578|ref|YP_003727328.1|	-	6.1e-151	502.3	4.2	6.9e-151	502.1	4.2	1.0	1	0	0	1	1	1	1	3-dehydroquinate	synthase	II
OapA	PF04225.12	gi|298675578|ref|YP_003727328.1|	-	0.024	14.7	0.2	1.7	8.8	0.0	2.4	1	1	1	2	2	2	0	Opacity-associated	protein	A	LysM-like	domain
DHquinase_I	PF01487.15	gi|298675579|ref|YP_003727329.1|	-	1.6e-54	185.6	0.0	1.9e-54	185.3	0.0	1.0	1	0	0	1	1	1	1	Type	I	3-dehydroquinase
Hydrophobin_2	PF06766.11	gi|298675579|ref|YP_003727329.1|	-	0.074	13.0	0.0	0.14	12.2	0.0	1.4	1	0	0	1	1	1	0	Fungal	hydrophobin
Spatacsin_C	PF14649.6	gi|298675579|ref|YP_003727329.1|	-	0.13	11.3	0.0	0.17	11.0	0.0	1.1	1	0	0	1	1	1	0	Spatacsin	C-terminus
Shikimate_dh_N	PF08501.11	gi|298675580|ref|YP_003727330.1|	-	3.4e-26	91.3	0.0	8.2e-26	90.1	0.0	1.7	2	0	0	2	2	2	1	Shikimate	dehydrogenase	substrate	binding	domain
SDH_C	PF18317.1	gi|298675580|ref|YP_003727330.1|	-	2.2e-13	49.7	0.1	3.6e-13	49.0	0.1	1.4	1	0	0	1	1	1	1	Shikimate	5'-dehydrogenase	C-terminal	domain
Shikimate_DH	PF01488.20	gi|298675580|ref|YP_003727330.1|	-	4.6e-13	49.4	0.1	7.3e-13	48.8	0.1	1.2	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|298675580|ref|YP_003727330.1|	-	0.00024	20.5	0.1	0.00061	19.2	0.1	1.6	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|298675580|ref|YP_003727330.1|	-	0.0041	16.7	0.2	0.011	15.3	0.1	1.8	1	1	1	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
adh_short	PF00106.25	gi|298675580|ref|YP_003727330.1|	-	0.0064	16.0	0.2	0.013	15.0	0.2	1.6	1	1	0	1	1	1	1	short	chain	dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|298675580|ref|YP_003727330.1|	-	0.022	15.0	0.1	0.057	13.7	0.1	1.6	1	1	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
AlaDh_PNT_C	PF01262.21	gi|298675580|ref|YP_003727330.1|	-	0.067	12.5	0.3	0.11	11.8	0.3	1.2	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
PDH	PF02153.17	gi|298675581|ref|YP_003727331.1|	-	1.5e-62	210.9	0.0	2.4e-62	210.3	0.0	1.3	1	0	0	1	1	1	1	Prephenate	dehydrogenase
NAD_binding_2	PF03446.15	gi|298675581|ref|YP_003727331.1|	-	2.1e-12	47.5	0.0	5e-12	46.3	0.0	1.6	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.17	gi|298675581|ref|YP_003727331.1|	-	4.1e-09	36.9	0.0	2.1e-08	34.7	0.0	2.2	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.19	gi|298675581|ref|YP_003727331.1|	-	2.1e-08	33.7	0.0	3.9e-08	32.9	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|298675581|ref|YP_003727331.1|	-	6.5e-05	23.0	4.4	0.012	15.6	1.3	3.1	2	2	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
FDX-ACB	PF03147.14	gi|298675581|ref|YP_003727331.1|	-	0.00012	22.4	0.1	0.00043	20.6	0.0	1.9	2	0	0	2	2	2	1	Ferredoxin-fold	anticodon	binding	domain
IlvN	PF07991.12	gi|298675581|ref|YP_003727331.1|	-	0.00028	20.5	0.0	0.00052	19.6	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
3HCDH_N	PF02737.18	gi|298675581|ref|YP_003727331.1|	-	0.0011	18.8	0.1	1.1	9.1	0.0	2.6	1	1	1	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|298675581|ref|YP_003727331.1|	-	0.0026	17.8	0.0	0.013	15.5	0.0	2.2	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
ApbA	PF02558.16	gi|298675581|ref|YP_003727331.1|	-	0.0067	16.1	0.1	0.036	13.7	0.0	2.2	2	1	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
DpaA_N	PF16924.5	gi|298675581|ref|YP_003727331.1|	-	0.008	16.3	0.0	0.021	14.9	0.0	1.7	1	0	0	1	1	1	1	Dipicolinate	synthase	subunit	A	N-terminal	domain
DapB_N	PF01113.20	gi|298675581|ref|YP_003727331.1|	-	0.013	15.7	0.6	0.076	13.1	0.0	2.6	3	0	0	3	3	3	0	Dihydrodipicolinate	reductase,	N-terminus
WzyE	PF06899.11	gi|298675581|ref|YP_003727331.1|	-	0.02	13.8	0.0	0.03	13.3	0.0	1.1	1	0	0	1	1	1	0	WzyE	protein,	O-antigen	assembly	polymerase
Semialdhyde_dh	PF01118.24	gi|298675581|ref|YP_003727331.1|	-	0.03	14.8	0.0	0.098	13.1	0.0	1.9	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
CoA_binding	PF02629.19	gi|298675581|ref|YP_003727331.1|	-	0.038	14.7	0.0	0.29	11.8	0.0	2.5	3	0	0	3	3	2	0	CoA	binding	domain
AlaDh_PNT_C	PF01262.21	gi|298675581|ref|YP_003727331.1|	-	0.044	13.1	0.1	0.83	8.9	0.0	2.5	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
KR	PF08659.10	gi|298675581|ref|YP_003727331.1|	-	0.06	13.2	0.0	0.31	10.9	0.0	2.1	3	0	0	3	3	3	0	KR	domain
TIR_2	PF13676.6	gi|298675581|ref|YP_003727331.1|	-	0.086	13.5	0.0	0.23	12.1	0.0	1.6	1	0	0	1	1	1	0	TIR	domain
NmrA	PF05368.13	gi|298675581|ref|YP_003727331.1|	-	0.1	12.1	0.1	0.32	10.5	0.1	1.9	1	1	0	1	1	1	0	NmrA-like	family
GFO_IDH_MocA	PF01408.22	gi|298675581|ref|YP_003727331.1|	-	0.12	13.3	0.1	0.44	11.4	0.0	2.0	2	0	0	2	2	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
CKS	PF01111.19	gi|298675581|ref|YP_003727331.1|	-	0.19	12.1	0.2	0.42	10.9	0.2	1.5	1	0	0	1	1	1	0	Cyclin-dependent	kinase	regulatory	subunit
TIM	PF00121.18	gi|298675582|ref|YP_003727332.1|	-	3.7e-14	52.7	0.2	1.8e-13	50.4	0.1	1.8	1	1	1	2	2	2	1	Triosephosphate	isomerase
ThiG	PF05690.14	gi|298675582|ref|YP_003727332.1|	-	2.3e-05	23.8	0.3	2.3e-05	23.8	0.3	1.9	2	1	1	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
Hydrolase_like	PF13242.6	gi|298675582|ref|YP_003727332.1|	-	0.00018	21.5	0.2	0.57	10.3	0.0	2.3	2	0	0	2	2	2	2	HAD-hyrolase-like
NMO	PF03060.15	gi|298675582|ref|YP_003727332.1|	-	0.00039	19.9	5.3	0.00048	19.6	1.1	2.3	2	1	1	3	3	3	1	Nitronate	monooxygenase
His_biosynth	PF00977.21	gi|298675582|ref|YP_003727332.1|	-	0.0013	18.3	0.1	0.037	13.5	0.0	2.5	3	0	0	3	3	3	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.18	gi|298675582|ref|YP_003727332.1|	-	0.0035	16.4	0.7	0.0062	15.6	0.2	1.7	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
IGPS	PF00218.21	gi|298675582|ref|YP_003727332.1|	-	0.012	14.8	0.0	0.028	13.6	0.0	1.5	1	1	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
PcrB	PF01884.17	gi|298675582|ref|YP_003727332.1|	-	0.07	12.6	1.0	0.1	12.1	1.0	1.6	1	1	0	1	1	1	0	PcrB	family
PRT_C	PF08372.10	gi|298675582|ref|YP_003727332.1|	-	0.076	12.8	0.0	0.12	12.1	0.0	1.2	1	0	0	1	1	1	0	Plant	phosphoribosyltransferase	C-terminal
Fae	PF08714.11	gi|298675583|ref|YP_003727333.1|	-	4.2e-71	238.0	0.5	9.6e-71	236.9	0.5	1.6	1	0	0	1	1	1	1	Formaldehyde-activating	enzyme	(Fae)
OMPdecase	PF00215.24	gi|298675583|ref|YP_003727333.1|	-	1.2e-24	87.1	0.9	3.5e-24	85.7	0.4	1.9	2	0	0	2	2	2	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Ribul_P_3_epim	PF00834.19	gi|298675583|ref|YP_003727333.1|	-	2.7e-05	23.6	1.4	0.00015	21.3	1.3	2.3	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
QRPTase_C	PF01729.19	gi|298675583|ref|YP_003727333.1|	-	0.00046	20.0	0.6	0.0054	16.5	0.3	2.3	2	1	0	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Peripla_BP_4	PF13407.6	gi|298675583|ref|YP_003727333.1|	-	0.0038	16.8	1.1	0.0095	15.5	1.1	1.6	1	1	0	1	1	1	1	Periplasmic	binding	protein	domain
AtuA	PF07287.11	gi|298675583|ref|YP_003727333.1|	-	0.013	14.2	0.6	0.024	13.3	0.4	1.4	1	1	0	1	1	1	0	Acyclic	terpene	utilisation	family	protein	AtuA
HhH-GPD	PF00730.25	gi|298675584|ref|YP_003727334.1|	-	5.3e-25	88.0	0.0	7e-25	87.6	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.23	gi|298675584|ref|YP_003727334.1|	-	8e-10	38.1	0.0	2.7e-09	36.4	0.0	1.9	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|298675584|ref|YP_003727334.1|	-	0.00061	20.4	0.0	0.47	11.1	0.0	2.5	1	1	2	3	3	3	3	Helix-hairpin-helix	domain
DUF2400	PF09674.10	gi|298675584|ref|YP_003727334.1|	-	0.001	19.1	0.0	0.065	13.2	0.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2400)
EndIII_4Fe-2S	PF10576.9	gi|298675584|ref|YP_003727334.1|	-	0.0041	17.4	4.7	0.0068	16.7	4.7	1.4	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
HHH_2	PF12826.7	gi|298675584|ref|YP_003727334.1|	-	0.0089	16.1	0.0	3.4	7.8	0.0	2.3	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
DUF763	PF05559.11	gi|298675584|ref|YP_003727334.1|	-	0.018	14.2	0.0	0.027	13.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
ProQ	PF04352.13	gi|298675584|ref|YP_003727334.1|	-	0.12	12.2	0.0	0.2	11.6	0.0	1.3	1	0	0	1	1	1	0	ProQ/FINO	family
DUF3349	PF11829.8	gi|298675584|ref|YP_003727334.1|	-	0.14	13.0	0.1	0.35	11.7	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3349)
GAD-like	PF08887.11	gi|298675584|ref|YP_003727334.1|	-	0.16	11.8	0.0	0.45	10.3	0.0	1.8	1	0	0	1	1	1	0	GAD-like	domain
DUF1409	PF07197.12	gi|298675584|ref|YP_003727334.1|	-	0.21	11.5	1.5	1.1	9.2	0.2	2.8	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1409)
FAD_binding_3	PF01494.19	gi|298675585|ref|YP_003727335.1|	-	2.3e-16	60.0	1.3	2.8e-11	43.3	0.3	3.0	2	1	0	2	2	2	2	FAD	binding	domain
Trp_halogenase	PF04820.14	gi|298675585|ref|YP_003727335.1|	-	1.1e-08	34.4	0.1	0.00062	18.7	0.0	2.4	2	1	0	2	2	2	2	Tryptophan	halogenase
Pyr_redox_3	PF13738.6	gi|298675585|ref|YP_003727335.1|	-	1.1e-07	31.4	0.8	0.0023	17.3	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|298675585|ref|YP_003727335.1|	-	4.7e-07	29.3	1.5	4e-06	26.3	1.5	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|298675585|ref|YP_003727335.1|	-	5.6e-07	29.5	0.2	0.00097	18.8	0.0	2.5	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|298675585|ref|YP_003727335.1|	-	1.3e-06	27.4	0.4	6.3e-05	21.9	0.0	2.2	2	0	0	2	2	2	1	HI0933-like	protein
Thi4	PF01946.17	gi|298675585|ref|YP_003727335.1|	-	2.2e-06	27.1	0.4	1.2e-05	24.7	0.0	2.0	2	0	0	2	2	2	1	Thi4	family
FAD_oxidored	PF12831.7	gi|298675585|ref|YP_003727335.1|	-	2.8e-06	27.0	0.1	4e-06	26.5	0.1	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.12	gi|298675585|ref|YP_003727335.1|	-	1.6e-05	24.1	0.2	0.0001	21.5	0.5	2.0	2	1	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_2	PF00890.24	gi|298675585|ref|YP_003727335.1|	-	2.1e-05	23.8	0.2	3.5e-05	23.1	0.2	1.3	1	0	0	1	1	1	1	FAD	binding	domain
GIDA	PF01134.22	gi|298675585|ref|YP_003727335.1|	-	2.9e-05	23.3	1.3	5.3e-05	22.5	1.3	1.5	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|298675585|ref|YP_003727335.1|	-	0.00019	21.6	0.0	0.0005	20.2	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.27	gi|298675585|ref|YP_003727335.1|	-	0.0027	18.2	0.6	0.32	11.6	0.0	2.8	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
HisKA_2	PF07568.12	gi|298675586|ref|YP_003727336.1|	-	3.2e-28	97.6	1.9	3.2e-28	97.6	1.9	2.4	2	0	0	2	2	2	1	Histidine	kinase
PAS_9	PF13426.7	gi|298675586|ref|YP_003727336.1|	-	2e-21	76.2	4.7	3.5e-09	36.8	0.1	4.9	5	1	0	5	5	5	3	PAS	domain
PAS	PF00989.25	gi|298675586|ref|YP_003727336.1|	-	6.4e-21	74.5	0.0	3.3e-08	33.5	0.0	3.9	3	1	1	4	4	4	3	PAS	fold
PAS_4	PF08448.10	gi|298675586|ref|YP_003727336.1|	-	1.2e-20	73.8	0.0	2.1e-06	28.0	0.0	4.9	4	1	1	5	5	5	3	PAS	fold
PAS_8	PF13188.7	gi|298675586|ref|YP_003727336.1|	-	3.9e-19	68.2	0.1	2.2e-05	24.4	0.0	3.6	3	0	0	3	3	3	3	PAS	domain
HATPase_c	PF02518.26	gi|298675586|ref|YP_003727336.1|	-	1.4e-09	38.4	0.2	9.2e-09	35.8	0.2	2.3	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_3	PF08447.12	gi|298675586|ref|YP_003727336.1|	-	2.2e-07	31.1	0.0	0.0018	18.6	0.0	3.0	3	0	0	3	3	3	2	PAS	fold
HWE_HK	PF07536.14	gi|298675586|ref|YP_003727336.1|	-	1.7e-05	25.4	0.6	4e-05	24.2	0.1	1.9	2	0	0	2	2	2	1	HWE	histidine	kinase
HATPase_c_2	PF13581.6	gi|298675586|ref|YP_003727336.1|	-	0.00035	20.5	0.0	0.00091	19.2	0.0	1.7	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
HATPase_c_3	PF13589.6	gi|298675586|ref|YP_003727336.1|	-	0.0014	18.4	0.2	0.0047	16.8	0.2	1.8	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_12	PF18095.1	gi|298675586|ref|YP_003727336.1|	-	0.0071	16.0	0.0	6.1	6.5	0.0	3.4	3	0	0	3	3	3	1	UPF0242	C-terminal	PAS-like	domain
SPOB_a	PF14689.6	gi|298675586|ref|YP_003727336.1|	-	0.16	11.7	2.3	1.1	9.1	2.2	2.5	2	1	1	3	3	3	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
HEAT_2	PF13646.6	gi|298675588|ref|YP_003727338.1|	-	2.5e-136	444.4	34.0	8.1e-19	67.8	1.1	12.8	3	2	8	12	12	12	11	HEAT	repeats
HEAT_PBS	PF03130.16	gi|298675588|ref|YP_003727338.1|	-	2.5e-88	281.8	4.9	2.8e-06	27.5	0.2	23.9	25	0	0	25	25	24	15	PBS	lyase	HEAT-like	repeat
HEAT	PF02985.22	gi|298675588|ref|YP_003727338.1|	-	5.5e-76	243.9	1.4	0.00027	21.0	0.0	20.9	21	0	0	21	21	21	15	HEAT	repeat
HEAT_EZ	PF13513.6	gi|298675588|ref|YP_003727338.1|	-	2.9e-49	165.0	18.5	0.035	14.6	0.0	21.2	19	3	3	22	22	22	9	HEAT-like	repeat
Arm	PF00514.23	gi|298675588|ref|YP_003727338.1|	-	2.8e-34	116.1	8.0	0.062	13.4	0.0	19.6	13	5	9	22	22	22	6	Armadillo/beta-catenin-like	repeat
Cnd1	PF12717.7	gi|298675588|ref|YP_003727338.1|	-	4.4e-29	101.6	25.6	0.00032	20.8	0.0	12.5	2	2	7	12	12	12	9	non-SMC	mitotic	condensation	complex	subunit	1
Adaptin_N	PF01602.20	gi|298675588|ref|YP_003727338.1|	-	3.1e-14	52.5	25.1	0.0034	16.0	3.8	8.6	2	2	4	6	6	6	5	Adaptin	N	terminal	region
Aconitase_B_N	PF11791.8	gi|298675588|ref|YP_003727338.1|	-	1.5e-10	41.4	17.9	3.2	7.8	0.0	11.3	4	2	6	12	12	12	2	Aconitate	B	N-terminal	domain
Vac14_Fab1_bd	PF12755.7	gi|298675588|ref|YP_003727338.1|	-	1.3e-09	38.5	3.1	42	4.8	0.0	10.1	6	4	4	10	10	9	0	Vacuolar	14	Fab1-binding	region
ERAP1_C	PF11838.8	gi|298675588|ref|YP_003727338.1|	-	3.2e-08	33.5	12.9	0.18	11.3	0.2	6.9	1	1	5	7	7	7	3	ERAP1-like	C-terminal	domain
BRCC36_C	PF18110.1	gi|298675588|ref|YP_003727338.1|	-	7.7e-06	26.0	1.6	24	5.2	0.0	8.8	6	2	5	11	11	11	0	BRCC36	C-terminal	helical	domain
DUF3385	PF11865.8	gi|298675588|ref|YP_003727338.1|	-	6.4e-05	22.9	0.0	25	4.7	0.1	5.8	4	2	1	5	5	4	0	Domain	of	unknown	function	(DUF3385)
CLASP_N	PF12348.8	gi|298675588|ref|YP_003727338.1|	-	0.00055	19.6	6.4	0.5	9.9	0.0	6.7	3	2	2	6	6	6	1	CLASP	N	terminal
RICTOR_M	PF14666.6	gi|298675588|ref|YP_003727338.1|	-	0.0033	17.2	0.7	3	7.7	0.0	6.0	7	1	0	7	7	7	1	Rapamycin-insensitive	companion	of	mTOR,	middle	domain
IBN_N	PF03810.19	gi|298675588|ref|YP_003727338.1|	-	0.05	13.5	1.0	5.3	7.0	0.0	5.0	6	1	1	7	7	6	0	Importin-beta	N-terminal	domain
SGS	PF05002.15	gi|298675588|ref|YP_003727338.1|	-	0.26	11.4	3.3	1.6	8.9	0.3	3.4	3	0	0	3	3	3	0	SGS	domain
DUF2274	PF10038.9	gi|298675588|ref|YP_003727338.1|	-	0.27	11.7	1.9	1.1e+02	3.3	0.1	4.5	3	1	2	5	5	4	0	Protein	of	unknown	function	(DUF2274)
V-ATPase_H_N	PF03224.14	gi|298675588|ref|YP_003727338.1|	-	0.42	9.8	16.1	6	6.1	0.0	6.2	2	2	2	7	7	7	0	V-ATPase	subunit	H
DUF1829	PF08862.10	gi|298675588|ref|YP_003727338.1|	-	0.43	11.1	35.4	1.1	9.8	0.2	9.7	5	4	6	11	11	11	0	Domain	of	unknown	function	DUF1829
GlutR_dimer	PF00745.20	gi|298675588|ref|YP_003727338.1|	-	0.67	10.4	12.5	17	6.0	0.3	7.2	6	4	2	10	10	7	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
cobW	PF02492.19	gi|298675590|ref|YP_003727340.1|	-	1.6e-38	132.0	2.0	2.7e-38	131.3	2.0	1.3	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
MeaB	PF03308.16	gi|298675590|ref|YP_003727340.1|	-	4e-05	22.7	0.9	0.01	14.8	0.2	2.3	2	0	0	2	2	2	2	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Herpes_ori_bp	PF02399.15	gi|298675590|ref|YP_003727340.1|	-	0.0038	15.3	3.3	0.31	9.0	0.0	2.1	2	0	0	2	2	2	2	Origin	of	replication	binding	protein
ATP_bind_1	PF03029.17	gi|298675590|ref|YP_003727340.1|	-	0.0066	16.3	1.0	2.4	7.9	0.1	2.3	2	0	0	2	2	2	2	Conserved	hypothetical	ATP	binding	protein
SRP54	PF00448.22	gi|298675590|ref|YP_003727340.1|	-	0.0074	15.9	0.1	0.02	14.5	0.1	1.7	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
TK	PF00265.18	gi|298675590|ref|YP_003727340.1|	-	0.032	14.1	1.8	0.45	10.4	0.0	2.8	2	1	1	3	3	3	0	Thymidine	kinase
MobB	PF03205.14	gi|298675590|ref|YP_003727340.1|	-	0.046	13.6	1.3	0.36	10.7	0.3	2.4	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CbiA	PF01656.23	gi|298675590|ref|YP_003727340.1|	-	0.066	13.3	0.2	0.066	13.3	0.2	2.2	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
T2SSE	PF00437.20	gi|298675590|ref|YP_003727340.1|	-	0.099	11.7	0.5	0.21	10.6	0.5	1.6	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_31	PF13614.6	gi|298675590|ref|YP_003727340.1|	-	0.18	11.7	0.1	0.18	11.7	0.1	2.7	2	1	1	3	3	3	0	AAA	domain
AAA_18	PF13238.6	gi|298675590|ref|YP_003727340.1|	-	0.18	12.3	0.3	0.18	12.3	0.3	2.9	3	1	0	3	3	3	0	AAA	domain
Viral_helicase1	PF01443.18	gi|298675590|ref|YP_003727340.1|	-	0.29	10.8	2.1	0.67	9.6	0.2	2.2	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_14	PF13173.6	gi|298675590|ref|YP_003727340.1|	-	0.79	9.8	3.6	1.3	9.0	0.1	2.6	2	1	0	2	2	2	0	AAA	domain
RACo_C_ter	PF14574.6	gi|298675591|ref|YP_003727341.1|	-	1e-69	234.5	2.9	4.7e-69	232.3	2.9	1.9	1	1	0	1	1	1	1	C-terminal	domain	of	RACo	the	ASKHA	domain
Raco_middle	PF17651.1	gi|298675591|ref|YP_003727341.1|	-	3e-13	49.8	0.4	7.8e-13	48.4	0.2	1.9	2	0	0	2	2	2	1	RACo	middle	region
Fer4	PF00037.27	gi|298675591|ref|YP_003727341.1|	-	6.5e-07	28.9	7.4	0.003	17.3	0.8	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298675591|ref|YP_003727341.1|	-	6.3e-06	26.2	4.5	0.019	15.1	0.5	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675591|ref|YP_003727341.1|	-	7e-06	26.1	10.4	1.5e-05	25.1	10.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675591|ref|YP_003727341.1|	-	7.2e-06	26.9	9.1	0.00051	20.9	1.3	2.6	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|298675591|ref|YP_003727341.1|	-	3e-05	24.1	8.6	6.6e-05	23.0	8.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675591|ref|YP_003727341.1|	-	3.7e-05	24.2	11.4	0.00043	20.8	12.3	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298675591|ref|YP_003727341.1|	-	0.0001	22.2	11.7	0.00053	20.0	2.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298675591|ref|YP_003727341.1|	-	0.00031	21.1	5.2	0.072	13.5	0.2	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675591|ref|YP_003727341.1|	-	0.013	15.5	2.2	0.013	15.5	2.2	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|298675591|ref|YP_003727341.1|	-	0.033	14.7	11.8	0.056	14.0	2.7	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|298675591|ref|YP_003727341.1|	-	0.09	13.8	14.7	0.51	11.4	4.3	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298675591|ref|YP_003727341.1|	-	1.1	9.8	12.7	1.7	9.3	3.0	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Cpn60_TCP1	PF00118.24	gi|298675592|ref|YP_003727342.1|	-	1.6e-110	370.1	2.9	1.8e-110	369.9	2.9	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Hydantoinase_A	PF01968.18	gi|298675593|ref|YP_003727343.1|	-	2.2e-31	109.2	0.5	2.2e-31	109.2	0.5	2.3	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.13	gi|298675593|ref|YP_003727343.1|	-	1.7e-29	102.8	7.2	1e-26	93.7	1.3	3.4	2	1	0	2	2	2	2	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.6	gi|298675593|ref|YP_003727343.1|	-	0.00013	20.7	4.4	0.068	11.8	0.7	2.2	2	0	0	2	2	2	2	MutL	protein
StbA	PF06406.11	gi|298675593|ref|YP_003727343.1|	-	0.059	12.6	0.0	0.14	11.4	0.0	1.6	1	0	0	1	1	1	0	StbA	protein
BcrAD_BadFG	PF01869.20	gi|298675593|ref|YP_003727343.1|	-	0.18	11.3	1.9	1.8	8.0	0.3	2.4	2	1	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
URO-D	PF01208.17	gi|298675594|ref|YP_003727344.1|	-	5.6e-58	196.7	0.0	1.7e-57	195.1	0.0	1.8	2	0	0	2	2	2	1	Uroporphyrinogen	decarboxylase	(URO-D)
B12-binding	PF02310.19	gi|298675594|ref|YP_003727344.1|	-	1e-23	83.6	0.0	5.3e-23	81.4	0.3	2.1	2	0	0	2	2	2	1	B12	binding	domain
B12-binding_2	PF02607.17	gi|298675594|ref|YP_003727344.1|	-	7.3e-15	55.2	0.0	7.3e-15	55.2	0.0	2.9	4	0	0	4	4	4	1	B12	binding	domain
Peripla_BP_6	PF13458.6	gi|298675594|ref|YP_003727344.1|	-	0.0086	15.8	0.1	0.023	14.4	0.1	1.7	1	0	0	1	1	1	1	Periplasmic	binding	protein
DUF1724	PF08350.10	gi|298675595|ref|YP_003727345.1|	-	3e-23	81.7	0.4	6.7e-23	80.6	0.4	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1724)
HTH_5	PF01022.20	gi|298675595|ref|YP_003727345.1|	-	5.4e-07	29.4	0.0	1e-06	28.5	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.6	gi|298675595|ref|YP_003727345.1|	-	0.0067	16.4	0.6	0.016	15.2	0.4	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix
DUF1495	PF07381.11	gi|298675595|ref|YP_003727345.1|	-	0.067	13.0	0.1	2.6	8.0	0.1	2.3	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
MEDS	PF14417.6	gi|298675596|ref|YP_003727346.1|	-	8.5e-29	100.5	0.0	1.6e-28	99.5	0.0	1.5	1	0	0	1	1	1	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
GAF_2	PF13185.6	gi|298675596|ref|YP_003727346.1|	-	2.9e-24	85.9	0.0	1e-23	84.1	0.0	1.9	2	0	0	2	2	2	1	GAF	domain
HATPase_c	PF02518.26	gi|298675596|ref|YP_003727346.1|	-	1.3e-22	80.4	0.1	2.4e-22	79.6	0.1	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_3	PF08447.12	gi|298675596|ref|YP_003727346.1|	-	2.2e-21	76.0	0.0	2.1e-15	56.8	0.1	3.4	3	0	0	3	3	3	2	PAS	fold
PAS	PF00989.25	gi|298675596|ref|YP_003727346.1|	-	1e-17	64.1	0.0	8.6e-11	41.8	0.0	3.4	3	0	0	3	3	3	2	PAS	fold
PAS_9	PF13426.7	gi|298675596|ref|YP_003727346.1|	-	8e-15	55.0	0.1	6.8e-08	32.7	0.0	3.0	2	0	0	2	2	2	2	PAS	domain
PAS_4	PF08448.10	gi|298675596|ref|YP_003727346.1|	-	1.3e-10	41.5	0.0	6.2e-07	29.6	0.0	2.7	2	0	0	2	2	2	2	PAS	fold
PAS_8	PF13188.7	gi|298675596|ref|YP_003727346.1|	-	2.1e-06	27.6	0.1	8.4e-06	25.7	0.0	2.1	2	0	0	2	2	2	1	PAS	domain
PAS_7	PF12860.7	gi|298675596|ref|YP_003727346.1|	-	0.00081	19.5	0.0	0.0034	17.5	0.0	2.1	2	0	0	2	2	2	1	PAS	fold
HATPase_c_3	PF13589.6	gi|298675596|ref|YP_003727346.1|	-	0.0096	15.7	0.4	0.027	14.3	0.0	1.9	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
RsmJ	PF04378.13	gi|298675596|ref|YP_003727346.1|	-	0.069	12.4	0.0	0.23	10.6	0.0	1.8	2	0	0	2	2	2	0	Ribosomal	RNA	large	subunit	methyltransferase	D,	RlmJ
DUF3067	PF11267.8	gi|298675596|ref|YP_003727346.1|	-	0.094	13.3	0.1	0.48	11.1	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3067)
CTNNBL	PF08216.11	gi|298675596|ref|YP_003727346.1|	-	0.16	12.2	1.4	1.1	9.5	0.3	2.4	2	0	0	2	2	2	0	Catenin-beta-like,	Arm-motif	containing	nuclear
HisKA	PF00512.25	gi|298675596|ref|YP_003727346.1|	-	0.48	10.5	4.3	0.78	9.8	0.4	3.0	3	0	0	3	3	3	0	His	Kinase	A	(phospho-acceptor)	domain
OrfB_IS605	PF01385.19	gi|298675597|ref|YP_003727347.1|	-	3.6e-22	78.8	0.3	1.5e-21	76.9	0.0	2.1	2	1	1	3	3	3	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675597|ref|YP_003727347.1|	-	2.2e-09	37.1	0.3	7.7e-09	35.4	0.0	2.1	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
DUF919	PF06034.11	gi|298675597|ref|YP_003727347.1|	-	0.026	14.3	0.5	0.067	13.0	0.5	1.7	1	0	0	1	1	1	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
RuvX	PF03652.15	gi|298675597|ref|YP_003727347.1|	-	0.074	13.4	0.0	0.18	12.2	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	resolvase
dUTPase	PF00692.19	gi|298675598|ref|YP_003727348.1|	-	2.6e-10	40.1	0.0	3.9e-10	39.5	0.0	1.2	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.11	gi|298675598|ref|YP_003727348.1|	-	0.0052	15.6	0.0	0.0095	14.8	0.0	1.5	1	1	0	1	1	1	1	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
DeoC	PF01791.9	gi|298675599|ref|YP_003727349.1|	-	1e-59	202.1	0.0	1.2e-59	201.8	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
OMPdecase	PF00215.24	gi|298675599|ref|YP_003727349.1|	-	0.004	16.8	0.3	0.0067	16.0	0.1	1.4	2	0	0	2	2	2	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
HGTP_anticodon	PF03129.20	gi|298675600|ref|YP_003727350.1|	-	1.9e-22	79.2	0.0	4.8e-22	77.9	0.0	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|298675600|ref|YP_003727350.1|	-	1.3e-12	48.0	0.0	6.5e-12	45.8	0.0	2.0	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
tRNA-synt_2	PF00152.20	gi|298675600|ref|YP_003727350.1|	-	0.006	15.7	0.1	1.7	7.7	0.0	2.8	3	0	0	3	3	3	2	tRNA	synthetases	class	II	(D,	K	and	N)
CpXC	PF14353.6	gi|298675600|ref|YP_003727350.1|	-	0.0084	16.2	0.1	0.017	15.1	0.1	1.5	1	0	0	1	1	1	1	CpXC	protein
zf-C2H2_4	PF13894.6	gi|298675600|ref|YP_003727350.1|	-	0.48	11.4	2.3	8.9	7.4	0.1	2.8	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Prim_Zn_Ribbon	PF08273.12	gi|298675600|ref|YP_003727350.1|	-	1.7	9.0	5.9	0.19	12.0	0.9	2.0	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
ERCC4	PF02732.15	gi|298675601|ref|YP_003727351.1|	-	1.3e-26	93.6	0.3	5.6e-26	91.6	0.3	2.2	1	0	0	1	1	1	1	ERCC4	domain
Helicase_C	PF00271.31	gi|298675601|ref|YP_003727351.1|	-	5.1e-25	88.0	0.1	1.7e-21	76.7	0.0	2.8	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|298675601|ref|YP_003727351.1|	-	6.5e-17	61.8	0.0	2.5e-16	60.0	0.0	2.0	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|298675601|ref|YP_003727351.1|	-	1.9e-15	57.3	0.6	8e-15	55.2	0.0	2.4	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
HHH_2	PF12826.7	gi|298675601|ref|YP_003727351.1|	-	1.7e-10	40.8	0.0	5.8e-10	39.1	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|298675601|ref|YP_003727351.1|	-	2.6e-08	34.3	0.0	8.2e-08	32.7	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH	PF00633.23	gi|298675601|ref|YP_003727351.1|	-	4.2e-06	26.3	0.3	4.8e-05	23.0	0.0	2.8	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.20	gi|298675601|ref|YP_003727351.1|	-	0.011	16.4	2.5	0.039	14.5	0.0	3.2	3	0	0	3	3	3	0	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_8	PF14716.6	gi|298675601|ref|YP_003727351.1|	-	0.028	14.8	0.0	0.14	12.5	0.0	2.3	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
COX6A	PF02046.15	gi|298675601|ref|YP_003727351.1|	-	0.13	12.7	0.0	0.34	11.4	0.0	1.7	1	0	0	1	1	1	0	Cytochrome	c	oxidase	subunit	VIa
Organ_specific	PF10950.8	gi|298675601|ref|YP_003727351.1|	-	0.39	11.4	3.7	0.66	10.7	0.5	2.8	3	0	0	3	3	3	0	Organ	specific	protein
Auto_anti-p27	PF06677.12	gi|298675602|ref|YP_003727352.1|	-	9.2e-14	51.3	2.7	1.4e-13	50.8	2.7	1.3	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DZR	PF12773.7	gi|298675602|ref|YP_003727352.1|	-	0.0044	17.0	1.9	0.0079	16.2	1.9	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
DNA_ligase_ZBD	PF03119.16	gi|298675602|ref|YP_003727352.1|	-	0.005	16.8	1.0	0.24	11.4	0.0	2.6	2	0	0	2	2	2	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn_Tnp_IS91	PF14319.6	gi|298675602|ref|YP_003727352.1|	-	0.045	13.8	0.9	0.078	13.0	0.9	1.4	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
zinc-ribbons_6	PF07191.12	gi|298675602|ref|YP_003727352.1|	-	0.07	13.1	2.1	0.16	12.0	2.1	1.5	1	1	0	1	1	1	0	zinc-ribbons
UPF0147	PF03685.13	gi|298675603|ref|YP_003727353.1|	-	7.2e-37	125.3	2.1	8.1e-37	125.1	2.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.12	gi|298675603|ref|YP_003727353.1|	-	0.0028	17.9	0.2	0.032	14.5	0.2	2.1	2	0	0	2	2	2	1	Uncharacterised	protein	family	(UPF0253)
Translin	PF01997.16	gi|298675604|ref|YP_003727354.1|	-	8.7e-08	32.4	0.0	4.2e-07	30.2	0.0	1.9	1	1	0	1	1	1	1	Translin	family
BLOC1S3	PF15753.5	gi|298675604|ref|YP_003727354.1|	-	0.1	12.7	0.2	0.59	10.2	0.0	2.0	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex	1	subunit	3
tRNA-synt_2d	PF01409.20	gi|298675605|ref|YP_003727355.1|	-	1.5e-53	181.9	0.0	5.3e-49	166.9	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
SepRS_C	PF18006.1	gi|298675605|ref|YP_003727355.1|	-	5.8e-13	48.7	0.2	1.5e-12	47.4	0.2	1.8	1	0	0	1	1	1	1	O-phosphoseryl-tRNA	synthetase	C-terminal	domain
tRNA_synthFbeta	PF17759.1	gi|298675605|ref|YP_003727355.1|	-	3.7e-11	42.9	0.0	1.4e-07	31.2	0.0	2.2	2	0	0	2	2	2	2	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
Lambda_Bor	PF06291.11	gi|298675605|ref|YP_003727355.1|	-	0.14	12.2	0.0	0.37	10.8	0.0	1.7	1	0	0	1	1	1	0	Bor	protein
Endonuclease_5	PF04493.14	gi|298675606|ref|YP_003727356.1|	-	3e-63	213.1	0.0	3.8e-63	212.8	0.0	1.0	1	0	0	1	1	1	1	Endonuclease	V
DUF99	PF01949.16	gi|298675606|ref|YP_003727356.1|	-	0.2	11.1	0.0	0.88	9.0	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF99
DUF169	PF02596.15	gi|298675607|ref|YP_003727357.1|	-	1.4e-31	110.0	0.0	1.6e-31	109.8	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ArCR,	COG2043
DUF473	PF04322.12	gi|298675608|ref|YP_003727358.1|	-	7.5e-47	158.0	0.8	8.5e-47	157.9	0.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF473)
PAC2	PF09754.9	gi|298675609|ref|YP_003727359.1|	-	1.8e-50	171.9	0.1	2.1e-50	171.7	0.1	1.0	1	0	0	1	1	1	1	PAC2	family
Laminin_II	PF06009.12	gi|298675609|ref|YP_003727359.1|	-	0.14	12.2	0.0	0.27	11.2	0.0	1.4	1	0	0	1	1	1	0	Laminin	Domain	II
UL45	PF05473.12	gi|298675610|ref|YP_003727360.1|	-	0.095	12.3	0.1	0.095	12.3	0.1	1.2	1	0	0	1	1	1	0	UL45	protein,	carbohydrate-binding	C-type	lectin-like
MTD	PF01993.18	gi|298675611|ref|YP_003727361.1|	-	1.4e-126	421.4	0.2	1.6e-126	421.2	0.2	1.0	1	0	0	1	1	1	1	methylene-5,6,7,8-tetrahydromethanopterin	dehydrogenase
HAD	PF12710.7	gi|298675612|ref|YP_003727362.1|	-	2.1e-17	64.2	0.0	2.8e-17	63.7	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|298675612|ref|YP_003727362.1|	-	7.1e-17	62.4	0.1	9.7e-17	61.9	0.1	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|298675612|ref|YP_003727362.1|	-	4.4e-12	46.3	0.1	1.5e-10	41.3	0.0	2.4	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.12	gi|298675612|ref|YP_003727362.1|	-	4.4e-11	42.6	0.1	3.2e-06	26.7	0.0	2.2	2	0	0	2	2	2	2	Putative	Phosphatase
HAD_2	PF13419.6	gi|298675612|ref|YP_003727362.1|	-	1.2e-07	32.0	1.0	3e-06	27.5	1.0	2.6	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|298675612|ref|YP_003727362.1|	-	0.011	15.8	0.0	0.033	14.3	0.0	1.7	2	0	0	2	2	2	0	HAD-hyrolase-like
DUF705	PF05152.12	gi|298675612|ref|YP_003727362.1|	-	0.069	12.6	0.0	0.13	11.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF705)
S6PP	PF05116.13	gi|298675612|ref|YP_003727362.1|	-	0.16	11.5	0.0	10	5.6	0.0	2.2	2	0	0	2	2	2	0	Sucrose-6F-phosphate	phosphohydrolase
OmpH	PF03938.14	gi|298675613|ref|YP_003727363.1|	-	0.0041	17.4	21.9	0.0041	17.4	21.9	3.9	1	1	1	3	3	3	1	Outer	membrane	protein	(OmpH-like)
HBM	PF16591.5	gi|298675613|ref|YP_003727363.1|	-	0.28	10.6	37.0	0.51	9.7	28.6	3.4	1	1	1	2	2	2	0	Helical	bimodular	sensor	domain
DUF2935	PF11155.8	gi|298675613|ref|YP_003727363.1|	-	0.31	11.4	27.4	1.9	8.9	4.9	4.3	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF2935)
DUF1771	PF08590.10	gi|298675613|ref|YP_003727363.1|	-	0.33	11.4	29.6	0.49	10.8	5.3	4.8	2	2	2	4	4	4	0	Domain	of	unknown	function	(DUF1771)
Seryl_tRNA_N	PF02403.22	gi|298675613|ref|YP_003727363.1|	-	6.4	7.1	61.4	0.052	13.8	20.6	4.0	1	1	3	4	4	4	0	Seryl-tRNA	synthetase	N-terminal	domain
Spc7	PF08317.11	gi|298675613|ref|YP_003727363.1|	-	7.4	5.4	60.6	5.6	5.7	27.1	2.2	1	1	1	2	2	2	0	Spc7	kinetochore	protein
Laminin_II	PF06009.12	gi|298675613|ref|YP_003727363.1|	-	8.6	6.4	40.4	3.3	7.7	6.3	4.0	1	1	4	5	5	5	0	Laminin	Domain	II
Radical_SAM	PF04055.21	gi|298675614|ref|YP_003727364.1|	-	1.5e-20	74.3	0.0	2.8e-20	73.3	0.0	1.5	2	0	0	2	2	2	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|298675614|ref|YP_003727364.1|	-	9.3e-07	29.3	0.2	1.9e-06	28.3	0.2	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_14	PF13394.6	gi|298675614|ref|YP_003727364.1|	-	7.8e-05	22.8	0.0	0.00016	21.8	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|298675614|ref|YP_003727364.1|	-	0.00037	20.8	0.0	0.0008	19.7	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Acetate_kinase	PF00871.17	gi|298675614|ref|YP_003727364.1|	-	0.1	11.2	0.0	0.15	10.7	0.0	1.1	1	0	0	1	1	1	0	Acetokinase	family
Pyr_redox_3	PF13738.6	gi|298675615|ref|YP_003727365.1|	-	5.4e-11	42.3	0.5	1.4e-10	40.9	0.5	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|298675615|ref|YP_003727365.1|	-	6.6e-11	41.5	0.2	8.1e-07	28.1	0.1	2.2	2	0	0	2	2	2	2	HI0933-like	protein
Pyr_redox_2	PF07992.14	gi|298675615|ref|YP_003727365.1|	-	1.3e-08	34.4	0.7	0.00034	19.9	0.0	2.4	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|298675615|ref|YP_003727365.1|	-	5.1e-08	32.5	0.0	0.00031	20.1	0.0	2.4	3	0	0	3	3	3	2	FAD	binding	domain
DAO	PF01266.24	gi|298675615|ref|YP_003727365.1|	-	8.7e-07	28.8	0.0	0.036	13.6	0.0	2.3	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.12	gi|298675615|ref|YP_003727365.1|	-	1.7e-06	27.4	0.0	0.0016	17.5	0.0	2.0	2	0	0	2	2	2	2	Lycopene	cyclase	protein
FAD_oxidored	PF12831.7	gi|298675615|ref|YP_003727365.1|	-	8.2e-06	25.4	0.1	1.4e-05	24.6	0.1	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|298675615|ref|YP_003727365.1|	-	3e-05	23.4	0.2	0.00032	20.0	0.0	2.3	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_2	PF00890.24	gi|298675615|ref|YP_003727365.1|	-	3.1e-05	23.2	0.1	0.00011	21.4	0.0	1.8	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|298675615|ref|YP_003727365.1|	-	7.2e-05	22.9	0.1	0.0019	18.4	0.0	2.7	2	1	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.22	gi|298675615|ref|YP_003727365.1|	-	0.00029	20.0	0.1	0.00065	18.9	0.1	1.5	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|298675615|ref|YP_003727365.1|	-	0.0016	17.7	0.1	0.0033	16.7	0.0	1.7	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.27	gi|298675615|ref|YP_003727365.1|	-	0.0043	17.6	0.0	0.18	12.3	0.0	2.9	3	0	0	3	3	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_7	PF13241.6	gi|298675615|ref|YP_003727365.1|	-	0.085	13.3	0.0	4.9	7.6	0.0	2.4	2	0	0	2	2	2	0	Putative	NAD(P)-binding
SAM_LFY	PF01698.16	gi|298675615|ref|YP_003727365.1|	-	0.1	12.6	0.1	0.24	11.4	0.1	1.6	1	0	0	1	1	1	0	Floricaula	/	Leafy	protein	SAM	domain
Trp_halogenase	PF04820.14	gi|298675615|ref|YP_003727365.1|	-	0.26	10.1	0.6	5.2	5.8	0.1	2.1	1	1	1	2	2	2	0	Tryptophan	halogenase
UbiA	PF01040.18	gi|298675616|ref|YP_003727366.1|	-	3.4e-39	134.7	13.7	4.5e-39	134.3	13.7	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
TGT	PF01702.18	gi|298675617|ref|YP_003727367.1|	-	4.4e-91	305.6	0.0	6e-91	305.2	0.0	1.1	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
DUF5591	PF17884.1	gi|298675617|ref|YP_003727367.1|	-	0.0073	16.2	0.3	0.019	14.8	0.1	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF5591)
ArsD	PF06953.11	gi|298675617|ref|YP_003727367.1|	-	0.11	12.8	0.0	8.1	6.8	0.0	2.4	2	0	0	2	2	2	0	Arsenical	resistance	operon	trans-acting	repressor	ArsD
eIF-1a	PF01176.19	gi|298675618|ref|YP_003727368.1|	-	1.7e-17	62.9	0.3	2.9e-17	62.2	0.3	1.4	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
RIO1	PF01163.22	gi|298675619|ref|YP_003727369.1|	-	2.2e-61	206.8	0.2	3.2e-61	206.2	0.2	1.2	1	0	0	1	1	1	1	RIO1	family
Pkinase	PF00069.25	gi|298675619|ref|YP_003727369.1|	-	5.7e-05	22.6	0.4	0.0002	20.8	0.3	1.7	1	1	1	2	2	2	1	Protein	kinase	domain
Kdo	PF06293.14	gi|298675619|ref|YP_003727369.1|	-	0.00053	19.4	0.0	0.0057	16.0	0.0	2.1	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase_fungal	PF17667.1	gi|298675619|ref|YP_003727369.1|	-	0.00057	18.8	0.1	0.00086	18.2	0.1	1.2	1	0	0	1	1	1	1	Fungal	protein	kinase
APH	PF01636.23	gi|298675619|ref|YP_003727369.1|	-	0.0062	16.5	0.0	0.061	13.2	0.0	2.1	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Pkinase_Tyr	PF07714.17	gi|298675619|ref|YP_003727369.1|	-	0.03	13.6	0.0	0.045	13.0	0.0	1.3	1	0	0	1	1	1	0	Protein	tyrosine	kinase
Choline_kinase	PF01633.20	gi|298675619|ref|YP_003727369.1|	-	0.036	13.6	0.1	0.1	12.2	0.1	1.7	2	0	0	2	2	2	0	Choline/ethanolamine	kinase
Fructosamin_kin	PF03881.14	gi|298675619|ref|YP_003727369.1|	-	0.05	12.8	0.0	0.11	11.7	0.0	1.5	1	1	0	1	1	1	0	Fructosamine	kinase
KH_1	PF00013.29	gi|298675620|ref|YP_003727370.1|	-	2.2e-10	40.2	11.2	4.8e-06	26.3	1.3	2.4	2	1	0	2	2	2	2	KH	domain
KH_2	PF07650.17	gi|298675620|ref|YP_003727370.1|	-	0.0031	17.3	9.6	0.081	12.8	0.4	3.4	2	2	2	4	4	4	2	KH	domain
KH_8	PF17903.1	gi|298675620|ref|YP_003727370.1|	-	0.048	13.8	0.0	0.098	12.8	0.0	1.5	1	0	0	1	1	1	0	Krr1	KH1	domain
KH_5	PF13184.6	gi|298675620|ref|YP_003727370.1|	-	0.54	10.4	4.8	6.7	6.9	0.1	3.1	2	1	1	3	3	3	0	NusA-like	KH	domain
KH_4	PF13083.6	gi|298675620|ref|YP_003727370.1|	-	0.62	10.0	7.1	5.1	7.0	1.4	3.2	2	2	1	3	3	3	0	KH	domain
DUF1614	PF07758.11	gi|298675621|ref|YP_003727371.1|	-	5.9e-33	114.3	13.6	8.2e-33	113.8	13.6	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1614)
ATPase	PF06745.13	gi|298675622|ref|YP_003727372.1|	-	1.8e-38	132.2	0.1	1.4e-37	129.3	0.1	2.0	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|298675622|ref|YP_003727372.1|	-	1.7e-09	37.5	0.0	3.4e-09	36.6	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
RecA	PF00154.21	gi|298675622|ref|YP_003727372.1|	-	1.1e-08	34.9	0.0	1.4e-08	34.5	0.0	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
DnaB_C	PF03796.15	gi|298675622|ref|YP_003727372.1|	-	1.4e-07	31.1	0.0	2.3e-07	30.4	0.0	1.4	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
GvpD	PF07088.11	gi|298675622|ref|YP_003727372.1|	-	3.3e-07	29.3	0.0	0.0066	15.1	0.0	2.1	1	1	1	2	2	2	2	GvpD	gas	vesicle	protein
AAA_18	PF13238.6	gi|298675622|ref|YP_003727372.1|	-	1.8e-05	25.3	0.1	0.00016	22.2	0.0	2.5	3	1	0	3	3	3	1	AAA	domain
Rad51	PF08423.11	gi|298675622|ref|YP_003727372.1|	-	3.1e-05	23.4	0.0	4.8e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Rad51
AAA_14	PF13173.6	gi|298675622|ref|YP_003727372.1|	-	0.00013	22.0	0.0	0.00038	20.5	0.0	1.9	2	1	0	2	2	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|298675622|ref|YP_003727372.1|	-	0.00015	21.6	0.0	0.00027	20.7	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
T2SSE	PF00437.20	gi|298675622|ref|YP_003727372.1|	-	0.0005	19.2	0.0	0.00074	18.7	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_24	PF13479.6	gi|298675622|ref|YP_003727372.1|	-	0.00065	19.5	0.0	0.0015	18.3	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.6	gi|298675622|ref|YP_003727372.1|	-	0.00091	19.6	0.0	0.0015	18.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|298675622|ref|YP_003727372.1|	-	0.0011	19.4	0.0	0.0017	18.8	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.29	gi|298675622|ref|YP_003727372.1|	-	0.0012	19.3	0.0	0.0032	17.9	0.0	1.6	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.15	gi|298675622|ref|YP_003727372.1|	-	0.0016	18.4	0.3	0.004	17.1	0.2	1.8	1	1	0	1	1	1	1	NTPase
AAA_22	PF13401.6	gi|298675622|ref|YP_003727372.1|	-	0.0027	18.0	0.0	0.0092	16.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_11	PF13086.6	gi|298675622|ref|YP_003727372.1|	-	0.0028	17.5	0.0	0.01	15.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|298675622|ref|YP_003727372.1|	-	0.0047	16.5	0.0	0.012	15.2	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
DUF2075	PF09848.9	gi|298675622|ref|YP_003727372.1|	-	0.0083	15.4	0.0	0.011	15.0	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
RNA_helicase	PF00910.22	gi|298675622|ref|YP_003727372.1|	-	0.009	16.4	0.0	0.056	13.8	0.0	2.2	1	1	0	1	1	1	1	RNA	helicase
ATPase_2	PF01637.18	gi|298675622|ref|YP_003727372.1|	-	0.0092	15.9	0.1	0.018	14.9	0.0	1.5	2	0	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_17	PF13207.6	gi|298675622|ref|YP_003727372.1|	-	0.027	14.9	0.1	0.12	12.8	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.26	gi|298675622|ref|YP_003727372.1|	-	0.029	14.1	0.0	0.08	12.6	0.0	1.7	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_33	PF13671.6	gi|298675622|ref|YP_003727372.1|	-	0.033	14.3	0.0	0.077	13.2	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
NACHT	PF05729.12	gi|298675622|ref|YP_003727372.1|	-	0.034	14.1	0.0	0.062	13.2	0.0	1.6	1	1	0	1	1	1	0	NACHT	domain
cobW	PF02492.19	gi|298675622|ref|YP_003727372.1|	-	0.035	13.7	0.1	0.097	12.2	0.0	2.1	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Thymidylate_kin	PF02223.17	gi|298675622|ref|YP_003727372.1|	-	0.042	13.5	0.0	0.15	11.8	0.0	1.9	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_5	PF07728.14	gi|298675622|ref|YP_003727372.1|	-	0.057	13.4	0.0	0.11	12.5	0.0	1.6	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.6	gi|298675622|ref|YP_003727372.1|	-	0.071	13.4	0.0	0.12	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|298675622|ref|YP_003727372.1|	-	0.073	12.8	0.0	0.13	11.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
PPV_E1_C	PF00519.17	gi|298675622|ref|YP_003727372.1|	-	0.076	11.8	0.1	0.19	10.5	0.0	1.6	2	0	0	2	2	2	0	Papillomavirus	helicase
Amidohydro_1	PF01979.20	gi|298675623|ref|YP_003727373.1|	-	3.1e-22	79.4	0.0	4.6e-22	78.8	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|298675623|ref|YP_003727373.1|	-	1.4e-10	41.2	0.0	0.00059	19.4	0.0	2.4	2	0	0	2	2	2	2	Amidohydrolase	family
OrfB_IS605	PF01385.19	gi|298675624|ref|YP_003727374.1|	-	1.1e-27	96.6	2.8	2.6e-27	95.4	2.8	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675624|ref|YP_003727374.1|	-	1.7e-23	82.3	0.2	3.6e-23	81.3	0.2	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298675624|ref|YP_003727374.1|	-	1.8e-19	68.9	1.4	4.1e-19	67.8	1.4	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298675624|ref|YP_003727374.1|	-	0.013	15.6	0.3	0.03	14.5	0.3	1.6	1	0	0	1	1	1	0	Piccolo	Zn-finger
LemA	PF04011.12	gi|298675624|ref|YP_003727374.1|	-	0.029	14.2	0.9	0.34	10.8	0.2	2.3	2	0	0	2	2	2	0	LemA	family
Phage_GP20	PF06810.11	gi|298675624|ref|YP_003727374.1|	-	0.26	11.1	7.0	0.63	9.8	3.5	2.3	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
PhoU	PF01895.19	gi|298675625|ref|YP_003727375.1|	-	8.8e-39	131.9	10.3	1.7e-20	73.3	0.3	2.1	2	0	0	2	2	2	2	PhoU	domain
DNA_pol_B	PF00136.21	gi|298675626|ref|YP_003727376.1|	-	1.3e-114	383.4	0.0	2.1e-114	382.8	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.19	gi|298675626|ref|YP_003727376.1|	-	8.4e-60	202.7	0.9	1.4e-59	202.0	0.9	1.3	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B_exo2	PF10108.9	gi|298675626|ref|YP_003727376.1|	-	7.6e-05	22.5	0.1	0.00073	19.3	0.0	2.1	2	0	0	2	2	2	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
RNase_H_2	PF13482.6	gi|298675626|ref|YP_003727376.1|	-	0.0013	18.8	0.1	0.0046	17.0	0.1	2.1	1	1	0	1	1	1	1	RNase_H	superfamily
MASE3	PF17159.4	gi|298675627|ref|YP_003727377.1|	-	2.8e-80	269.2	33.0	3.8e-80	268.7	33.0	1.2	1	0	0	1	1	1	1	Membrane-associated	sensor	domain
PAS_9	PF13426.7	gi|298675627|ref|YP_003727377.1|	-	7e-46	154.8	6.1	6e-19	68.2	0.0	3.9	4	0	0	4	4	4	3	PAS	domain
PAS	PF00989.25	gi|298675627|ref|YP_003727377.1|	-	5.6e-39	132.6	0.2	7.6e-14	51.7	0.0	3.7	3	1	0	3	3	3	3	PAS	fold
HisKA_2	PF07568.12	gi|298675627|ref|YP_003727377.1|	-	9.5e-31	105.7	2.5	9.5e-31	105.7	2.5	2.7	3	0	0	3	3	3	1	Histidine	kinase
PAS_4	PF08448.10	gi|298675627|ref|YP_003727377.1|	-	2.7e-29	101.6	0.0	4.4e-09	36.6	0.0	3.7	3	1	0	3	3	3	3	PAS	fold
PAS_8	PF13188.7	gi|298675627|ref|YP_003727377.1|	-	8.5e-24	83.1	0.0	5e-08	32.8	0.0	3.8	3	0	0	3	3	3	3	PAS	domain
PAS_3	PF08447.12	gi|298675627|ref|YP_003727377.1|	-	5.5e-18	65.0	0.0	1.8e-05	25.0	0.1	3.5	3	0	0	3	3	3	3	PAS	fold
HATPase_c	PF02518.26	gi|298675627|ref|YP_003727377.1|	-	3.9e-09	37.0	0.8	2.8e-08	34.3	0.3	2.6	2	1	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_10	PF13596.6	gi|298675627|ref|YP_003727377.1|	-	4.7e-09	36.8	0.0	5.5e-05	23.7	0.0	3.5	3	0	0	3	3	3	2	PAS	domain
HATPase_c_2	PF13581.6	gi|298675627|ref|YP_003727377.1|	-	3.1e-06	27.2	0.0	5.8e-06	26.3	0.0	1.4	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
HWE_HK	PF07536.14	gi|298675627|ref|YP_003727377.1|	-	6e-06	26.9	0.2	1.9e-05	25.3	0.2	1.9	1	0	0	1	1	1	1	HWE	histidine	kinase
PAS_7	PF12860.7	gi|298675627|ref|YP_003727377.1|	-	2.1e-05	24.7	2.2	0.031	14.5	0.0	5.0	2	2	2	4	4	4	1	PAS	fold
Vac14_Fab1_bd	PF12755.7	gi|298675627|ref|YP_003727377.1|	-	0.011	16.3	0.7	0.093	13.3	0.3	2.5	2	0	0	2	2	2	0	Vacuolar	14	Fab1-binding	region
HATPase_c_3	PF13589.6	gi|298675627|ref|YP_003727377.1|	-	0.062	13.1	0.2	0.2	11.5	0.2	1.8	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Imm27	PF15590.6	gi|298675628|ref|YP_003727378.1|	-	0.16	11.7	1.0	0.42	10.4	0.1	2.0	2	0	0	2	2	2	0	Immunity	protein	27
HTH_11	PF08279.12	gi|298675629|ref|YP_003727379.1|	-	0.00075	19.4	0.1	0.0011	18.9	0.1	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_24	PF13412.6	gi|298675629|ref|YP_003727379.1|	-	0.0039	16.7	0.2	0.0061	16.1	0.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.21	gi|298675629|ref|YP_003727379.1|	-	0.018	14.7	0.0	0.029	14.0	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Rrf2	PF02082.20	gi|298675629|ref|YP_003727379.1|	-	0.026	14.9	0.1	0.032	14.6	0.1	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
DnaG_DnaB_bind	PF08278.11	gi|298675629|ref|YP_003727379.1|	-	0.056	14.0	0.0	0.069	13.8	0.0	1.1	1	0	0	1	1	1	0	DNA	primase	DnaG	DnaB-binding
DUF1824	PF08854.10	gi|298675629|ref|YP_003727379.1|	-	0.096	12.6	0.0	0.1	12.5	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1824)
HTH_DeoR	PF08220.12	gi|298675629|ref|YP_003727379.1|	-	0.13	12.1	0.0	0.18	11.5	0.0	1.2	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
Pre-PUA	PF17832.1	gi|298675629|ref|YP_003727379.1|	-	0.18	12.5	1.2	1.4	9.6	1.2	2.0	1	1	0	1	1	1	0	Pre-PUA-like	domain
DUF1699	PF08004.11	gi|298675630|ref|YP_003727380.1|	-	4.7e-62	207.4	2.3	5.3e-62	207.3	2.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1699)
Molydop_binding	PF01568.21	gi|298675631|ref|YP_003727381.1|	-	1.6e-12	47.4	0.0	1.9e-12	47.2	0.0	1.1	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
CDC48_N	PF02359.18	gi|298675631|ref|YP_003727381.1|	-	0.011	15.9	0.0	0.015	15.5	0.0	1.2	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
Molybdopterin	PF00384.22	gi|298675632|ref|YP_003727382.1|	-	1e-14	54.4	0.0	3e-14	52.8	0.0	1.7	1	1	0	1	1	1	1	Molybdopterin	oxidoreductase
SpoVIF	PF14069.6	gi|298675632|ref|YP_003727382.1|	-	0.086	12.6	0.3	13	5.6	0.0	2.8	2	0	0	2	2	2	0	Stage	VI	sporulation	protein	F
Molybdop_Fe4S4	PF04879.16	gi|298675632|ref|YP_003727382.1|	-	0.089	12.8	0.6	0.23	11.5	0.6	1.7	1	0	0	1	1	1	0	Molybdopterin	oxidoreductase	Fe4S4	domain
Amidohydro_3	PF07969.11	gi|298675633|ref|YP_003727383.1|	-	1e-82	279.1	0.1	1.2e-82	278.9	0.1	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_1	PF01979.20	gi|298675633|ref|YP_003727383.1|	-	3.3e-05	23.4	0.0	0.0011	18.3	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
GXGXG	PF01493.19	gi|298675634|ref|YP_003727384.1|	-	4.3e-10	39.5	20.5	3.8e-08	33.2	20.5	3.0	1	1	0	1	1	1	1	GXGXG	motif
Toast_rack_N	PF17115.5	gi|298675634|ref|YP_003727384.1|	-	2.1	8.7	6.5	25	5.3	0.1	4.1	3	1	1	5	5	5	0	N-terminal	domain	of	toast_rack,	DUF2154
NAGLU_N	PF12971.7	gi|298675634|ref|YP_003727384.1|	-	7.6	6.4	5.9	4.1	7.3	0.3	3.3	2	2	1	3	3	3	0	Alpha-N-acetylglucosaminidase	(NAGLU)	N-terminal	domain
S-layer	PF07752.11	gi|298675636|ref|YP_003727386.1|	-	3.9e-162	537.4	40.7	5.7e-82	274.6	14.2	2.3	2	0	0	2	2	2	2	S-layer	protein
PKD	PF00801.20	gi|298675636|ref|YP_003727386.1|	-	2.3e-22	78.6	20.2	1.3e-11	44.2	2.1	4.6	5	0	0	5	5	5	2	PKD	domain
PGF-CTERM	PF18204.1	gi|298675636|ref|YP_003727386.1|	-	1.2e-09	37.8	2.7	2.5e-09	36.8	2.7	1.6	1	0	0	1	1	1	1	PGF-CTERM	motif
PKD_3	PF16820.5	gi|298675636|ref|YP_003727386.1|	-	1.5e-09	37.4	11.5	0.0003	20.5	1.5	4.1	3	0	0	3	3	3	2	PKD-like	domain
Saccharop_dh_N	PF04455.12	gi|298675636|ref|YP_003727386.1|	-	0.0054	17.1	0.3	3.1	8.3	0.1	2.6	2	0	0	2	2	2	2	LOR/SDH	bifunctional	enzyme	conserved	region
PTAC	PF06130.12	gi|298675636|ref|YP_003727386.1|	-	0.0089	16.2	2.3	45	4.3	0.0	5.9	6	0	0	6	6	6	0	Phosphate	propanoyltransferase
GbpA_2	PF18416.1	gi|298675636|ref|YP_003727386.1|	-	0.0099	16.2	8.3	25	5.2	0.1	4.8	4	0	0	4	4	4	0	N-acetylglucosamine	binding	protein	domain	2
Lipocalin_3	PF12702.7	gi|298675636|ref|YP_003727386.1|	-	0.041	14.0	0.7	14	5.9	0.1	3.1	2	0	0	2	2	2	0	Lipocalin-like
MecA	PF05389.12	gi|298675636|ref|YP_003727386.1|	-	0.34	10.5	3.5	16	5.0	0.1	2.8	2	1	0	2	2	2	0	Negative	regulator	of	genetic	competence	(MecA)
DUF4923	PF16270.5	gi|298675636|ref|YP_003727386.1|	-	1.1	9.1	7.2	18	5.1	0.0	4.2	5	2	0	5	5	5	0	Lipocalin-like	domain	(DUF4923)
ZoocinA_TRD	PF16775.5	gi|298675636|ref|YP_003727386.1|	-	1.1	9.4	8.2	19	5.5	0.0	4.3	4	0	0	4	4	4	0	Target	recognition	domain	of	lytic	exoenzyme
Cadherin	PF00028.17	gi|298675636|ref|YP_003727386.1|	-	6.3	7.3	7.0	66	4.0	1.7	3.4	2	1	0	2	2	2	0	Cadherin	domain
ATPase	PF06745.13	gi|298675637|ref|YP_003727387.1|	-	7e-72	241.5	0.5	7.9e-72	241.3	0.5	1.0	1	0	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|298675637|ref|YP_003727387.1|	-	0.00058	18.6	0.1	0.00075	18.2	0.1	1.1	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_25	PF13481.6	gi|298675637|ref|YP_003727387.1|	-	0.0026	17.4	0.0	0.0038	16.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|298675637|ref|YP_003727387.1|	-	0.023	14.0	0.0	0.039	13.3	0.0	1.5	1	1	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
ResIII	PF04851.15	gi|298675637|ref|YP_003727387.1|	-	0.059	13.4	0.1	0.077	13.0	0.1	1.3	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
MEDS	PF14417.6	gi|298675637|ref|YP_003727387.1|	-	0.059	13.2	0.0	0.095	12.5	0.0	1.4	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
Exonuc_VII_L	PF02601.15	gi|298675638|ref|YP_003727388.1|	-	2.3e-88	296.7	1.2	4e-76	256.5	0.5	2.1	1	1	1	2	2	2	2	Exonuclease	VII,	large	subunit
tRNA_anti_2	PF13742.6	gi|298675638|ref|YP_003727388.1|	-	1.4e-32	111.7	0.2	4e-32	110.3	0.2	1.8	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti-codon	PF01336.25	gi|298675638|ref|YP_003727388.1|	-	1.6e-06	28.0	0.2	9.4e-06	25.5	0.0	2.4	3	0	0	3	3	3	1	OB-fold	nucleic	acid	binding	domain
RecJ_OB	PF17768.1	gi|298675638|ref|YP_003727388.1|	-	0.0015	18.7	0.2	0.0035	17.6	0.2	1.6	1	0	0	1	1	1	1	RecJ	OB	domain
RbsD_FucU	PF05025.13	gi|298675638|ref|YP_003727388.1|	-	0.0064	16.9	0.3	5.1	7.5	0.0	2.6	2	0	0	2	2	2	2	RbsD	/	FucU	transport	protein	family
DUF1508	PF07411.12	gi|298675638|ref|YP_003727388.1|	-	0.033	14.1	0.0	0.13	12.2	0.0	2.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1508)
V-SNARE	PF05008.15	gi|298675638|ref|YP_003727388.1|	-	0.07	13.5	2.4	0.23	11.8	2.4	2.0	1	1	0	1	1	1	0	Vesicle	transport	v-SNARE	protein	N-terminus
Csm2_III-A	PF03750.13	gi|298675638|ref|YP_003727388.1|	-	0.28	12.0	3.0	0.71	10.7	3.0	1.7	1	0	0	1	1	1	0	Csm2	Type	III-A
Exonuc_VII_S	PF02609.16	gi|298675639|ref|YP_003727389.1|	-	5.8e-21	74.3	5.6	7.9e-21	73.9	5.6	1.2	1	0	0	1	1	1	1	Exonuclease	VII	small	subunit
TBCA	PF02970.16	gi|298675639|ref|YP_003727389.1|	-	0.063	13.6	4.4	1.7	9.1	4.0	2.0	1	1	0	1	1	1	0	Tubulin	binding	cofactor	A
DivIC	PF04977.15	gi|298675639|ref|YP_003727389.1|	-	0.064	13.0	0.5	0.064	13.0	0.5	1.9	1	1	1	2	2	2	0	Septum	formation	initiator
EF1_GNE	PF00736.19	gi|298675639|ref|YP_003727389.1|	-	0.071	13.3	1.7	0.093	12.9	1.7	1.2	1	0	0	1	1	1	0	EF-1	guanine	nucleotide	exchange	domain
RecG_N	PF17190.4	gi|298675639|ref|YP_003727389.1|	-	0.097	13.4	5.9	0.14	12.9	5.9	1.3	1	0	0	1	1	1	0	RecG	N-terminal	helical	domain
DUF2524	PF10732.9	gi|298675639|ref|YP_003727389.1|	-	0.16	12.3	3.3	1.2	9.5	0.3	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2524)
COG2	PF06148.11	gi|298675639|ref|YP_003727389.1|	-	0.27	11.3	4.5	0.57	10.3	1.4	1.9	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
YvrJ	PF12841.7	gi|298675639|ref|YP_003727389.1|	-	0.96	9.0	7.2	3.7	7.1	0.3	2.3	2	0	0	2	2	2	0	YvrJ	protein	family
bZIP_1	PF00170.21	gi|298675639|ref|YP_003727389.1|	-	0.97	9.6	7.7	1.2	9.3	0.8	2.1	1	1	1	2	2	2	0	bZIP	transcription	factor
Shugoshin_N	PF07558.11	gi|298675639|ref|YP_003727389.1|	-	1.8	8.5	7.2	0.23	11.3	2.5	1.8	2	0	0	2	2	2	0	Shugoshin	N-terminal	coiled-coil	region
ATPase	PF06745.13	gi|298675640|ref|YP_003727390.1|	-	3.8e-79	265.3	5.5	7.1e-51	172.8	0.7	2.7	2	1	0	2	2	2	2	KaiC
DnaB_C	PF03796.15	gi|298675640|ref|YP_003727390.1|	-	3.5e-10	39.6	0.0	1.1e-05	24.9	0.0	3.0	3	0	0	3	3	3	2	DnaB-like	helicase	C	terminal	domain
AAA_25	PF13481.6	gi|298675640|ref|YP_003727390.1|	-	3.6e-08	33.2	0.0	0.012	15.2	0.1	3.1	2	1	0	2	2	2	2	AAA	domain
AAA_18	PF13238.6	gi|298675640|ref|YP_003727390.1|	-	1e-06	29.3	0.2	0.00018	22.0	0.0	2.8	2	1	0	2	2	2	1	AAA	domain
Sigma54_activat	PF00158.26	gi|298675640|ref|YP_003727390.1|	-	1.9e-06	27.7	0.0	0.0063	16.2	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
RecA	PF00154.21	gi|298675640|ref|YP_003727390.1|	-	5.9e-06	25.9	0.1	0.0075	15.8	0.0	2.3	2	0	0	2	2	2	2	recA	bacterial	DNA	recombination	protein
AAA_16	PF13191.6	gi|298675640|ref|YP_003727390.1|	-	1e-05	26.0	0.0	0.011	16.1	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
GvpD	PF07088.11	gi|298675640|ref|YP_003727390.1|	-	2.6e-05	23.0	0.6	0.049	12.3	0.0	3.1	4	0	0	4	4	4	2	GvpD	gas	vesicle	protein
AAA_19	PF13245.6	gi|298675640|ref|YP_003727390.1|	-	3.2e-05	24.3	0.1	0.031	14.6	0.0	2.6	3	0	0	3	3	2	1	AAA	domain
AAA_14	PF13173.6	gi|298675640|ref|YP_003727390.1|	-	5.1e-05	23.3	0.1	0.03	14.4	0.0	2.9	2	2	0	2	2	2	1	AAA	domain
NACHT	PF05729.12	gi|298675640|ref|YP_003727390.1|	-	8e-05	22.6	0.1	0.22	11.5	0.0	2.4	2	0	0	2	2	2	2	NACHT	domain
AAA_22	PF13401.6	gi|298675640|ref|YP_003727390.1|	-	0.00012	22.4	0.0	0.61	10.4	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
DUF2075	PF09848.9	gi|298675640|ref|YP_003727390.1|	-	0.00014	21.2	0.0	0.39	9.9	0.0	2.2	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
AAA_24	PF13479.6	gi|298675640|ref|YP_003727390.1|	-	0.00014	21.6	3.4	0.1	12.3	0.1	2.9	2	2	1	3	3	3	2	AAA	domain
ResIII	PF04851.15	gi|298675640|ref|YP_003727390.1|	-	0.00024	21.1	0.0	0.42	10.6	0.0	2.6	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|298675640|ref|YP_003727390.1|	-	0.00042	20.1	0.0	0.41	10.4	0.0	2.3	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
AAA_7	PF12775.7	gi|298675640|ref|YP_003727390.1|	-	0.00045	19.8	0.3	0.29	10.6	0.2	2.4	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
IstB_IS21	PF01695.17	gi|298675640|ref|YP_003727390.1|	-	0.00072	19.3	0.1	0.43	10.3	0.1	2.6	3	0	0	3	3	2	1	IstB-like	ATP	binding	protein
T2SSE	PF00437.20	gi|298675640|ref|YP_003727390.1|	-	0.0009	18.4	0.2	0.73	8.8	0.1	2.3	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
Rad51	PF08423.11	gi|298675640|ref|YP_003727390.1|	-	0.0011	18.2	0.2	0.33	10.2	0.0	2.6	2	1	0	2	2	2	1	Rad51
DAP3	PF10236.9	gi|298675640|ref|YP_003727390.1|	-	0.0013	18.0	0.0	1.8	7.7	0.0	2.4	2	0	0	2	2	2	2	Mitochondrial	ribosomal	death-associated	protein	3
AAA_5	PF07728.14	gi|298675640|ref|YP_003727390.1|	-	0.0016	18.4	0.5	1.4	8.9	0.0	2.8	3	1	0	3	3	2	1	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.6	gi|298675640|ref|YP_003727390.1|	-	0.0017	18.1	0.0	0.23	11.1	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
PAXNEB	PF05625.11	gi|298675640|ref|YP_003727390.1|	-	0.003	16.7	0.5	0.67	9.0	0.0	3.1	3	0	0	3	3	3	1	PAXNEB	protein
RNA_helicase	PF00910.22	gi|298675640|ref|YP_003727390.1|	-	0.0031	17.9	0.1	0.66	10.4	0.0	2.9	3	0	0	3	3	2	1	RNA	helicase
AAA	PF00004.29	gi|298675640|ref|YP_003727390.1|	-	0.0033	17.8	0.4	2.8	8.4	0.2	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrwB_AAD_bind	PF10412.9	gi|298675640|ref|YP_003727390.1|	-	0.0034	16.3	0.0	0.05	12.5	0.0	2.2	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ArsA_ATPase	PF02374.15	gi|298675640|ref|YP_003727390.1|	-	0.0056	15.9	0.2	0.02	14.1	0.1	2.0	2	0	0	2	2	2	1	Anion-transporting	ATPase
CbiA	PF01656.23	gi|298675640|ref|YP_003727390.1|	-	0.0098	16.0	0.0	0.024	14.7	0.0	1.8	2	0	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MEDS	PF14417.6	gi|298675640|ref|YP_003727390.1|	-	0.017	15.0	0.0	0.035	14.0	0.0	1.5	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
RuvB_N	PF05496.12	gi|298675640|ref|YP_003727390.1|	-	0.022	14.5	3.0	0.46	10.2	0.0	3.2	4	0	0	4	4	3	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
ATPase_2	PF01637.18	gi|298675640|ref|YP_003727390.1|	-	0.031	14.2	0.0	0.074	13.0	0.0	1.6	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_11	PF13086.6	gi|298675640|ref|YP_003727390.1|	-	0.035	13.9	0.0	0.94	9.2	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.22	gi|298675640|ref|YP_003727390.1|	-	0.038	13.2	0.1	0.43	9.7	0.0	2.2	2	0	0	2	2	2	0	NB-ARC	domain
SRP54	PF00448.22	gi|298675640|ref|YP_003727390.1|	-	0.038	13.6	0.0	0.1	12.2	0.0	1.7	2	0	0	2	2	1	0	SRP54-type	protein,	GTPase	domain
PhoH	PF02562.16	gi|298675640|ref|YP_003727390.1|	-	0.04	13.4	0.5	6.6	6.1	0.0	2.3	2	0	0	2	2	2	0	PhoH-like	protein
TsaE	PF02367.17	gi|298675640|ref|YP_003727390.1|	-	0.051	13.6	1.4	13	5.8	0.2	2.8	3	0	0	3	3	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_33	PF13671.6	gi|298675640|ref|YP_003727390.1|	-	0.06	13.5	0.0	11	6.2	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_10	PF12846.7	gi|298675640|ref|YP_003727390.1|	-	0.067	12.1	0.0	0.92	8.4	0.0	2.2	2	0	0	2	2	2	0	AAA-like	domain
Roc	PF08477.13	gi|298675640|ref|YP_003727390.1|	-	0.068	13.4	0.1	2.9	8.1	0.0	2.6	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
CLP1_P	PF16575.5	gi|298675640|ref|YP_003727390.1|	-	0.11	12.3	0.1	1.1	9.0	0.0	2.2	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
KdpD	PF02702.17	gi|298675640|ref|YP_003727390.1|	-	0.11	12.0	0.0	0.62	9.5	0.0	2.0	2	0	0	2	2	2	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
ATP-synt_ab	PF00006.25	gi|298675640|ref|YP_003727390.1|	-	0.13	11.9	0.0	2.3	7.8	0.0	2.3	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_26	PF13500.6	gi|298675640|ref|YP_003727390.1|	-	0.14	12.0	0.1	0.35	10.7	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
NTPase_1	PF03266.15	gi|298675640|ref|YP_003727390.1|	-	0.35	10.8	4.8	1.4	8.8	0.4	3.2	4	0	0	4	4	4	0	NTPase
DUF5345	PF17280.2	gi|298675641|ref|YP_003727391.1|	-	0.068	13.1	0.1	0.092	12.7	0.1	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5345)
OrfB_Zn_ribbon	PF07282.11	gi|298675642|ref|YP_003727392.1|	-	3.5e-18	65.3	0.9	7.1e-18	64.3	0.9	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675642|ref|YP_003727392.1|	-	6.6e-11	42.5	1.0	1.4e-10	41.4	1.0	1.5	1	0	0	1	1	1	1	Probable	transposase
HTH_OrfB_IS605	PF12323.8	gi|298675642|ref|YP_003727392.1|	-	3.5e-10	39.2	0.0	8.4e-10	38.0	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-C3HC4_3	PF13920.6	gi|298675642|ref|YP_003727392.1|	-	1.3	9.0	5.7	2.4	8.1	5.7	1.4	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Rpr2	PF04032.16	gi|298675643|ref|YP_003727393.1|	-	1.7e-18	66.6	0.6	2.3e-18	66.2	0.6	1.2	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
ADD_ATRX	PF17981.1	gi|298675643|ref|YP_003727393.1|	-	0.034	14.0	3.3	0.54	10.2	0.1	2.2	1	1	1	2	2	2	0	Cysteine	Rich	ADD	domain
Haem_degrading	PF03928.14	gi|298675643|ref|YP_003727393.1|	-	0.086	12.9	0.0	0.086	12.9	0.0	1.2	1	0	0	1	1	1	0	Haem-degrading
HNH_5	PF14279.6	gi|298675643|ref|YP_003727393.1|	-	0.09	12.7	3.1	7.6	6.5	0.0	2.3	2	0	0	2	2	2	0	HNH	endonuclease
zf-RRN7	PF11781.8	gi|298675643|ref|YP_003727393.1|	-	0.2	11.4	1.1	3.3	7.5	0.0	2.2	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Lactamase_B_3	PF13483.6	gi|298675644|ref|YP_003727394.1|	-	1e-35	123.0	0.4	1.9e-35	122.2	0.1	1.5	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|298675644|ref|YP_003727394.1|	-	1.7e-14	53.8	0.1	3.9e-14	52.6	0.1	1.6	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|298675644|ref|YP_003727394.1|	-	0.00023	21.3	1.4	0.42	10.6	0.3	2.4	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
TrmB	PF01978.19	gi|298675645|ref|YP_003727395.1|	-	5.2e-23	80.7	0.4	5.2e-23	80.7	0.4	2.3	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.14	gi|298675645|ref|YP_003727395.1|	-	0.018	15.0	0.0	0.043	13.8	0.0	1.6	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF2250	PF10007.9	gi|298675645|ref|YP_003727395.1|	-	0.026	14.6	0.3	0.079	13.1	0.1	2.0	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.20	gi|298675645|ref|YP_003727395.1|	-	0.16	12.3	0.0	0.3	11.5	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_IclR	PF09339.10	gi|298675645|ref|YP_003727395.1|	-	0.21	11.4	0.0	0.37	10.6	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
MMPL	PF03176.15	gi|298675646|ref|YP_003727396.1|	-	4.8e-60	203.3	4.8	6.2e-30	104.3	0.1	2.1	2	0	0	2	2	2	2	MMPL	family
ACR_tran	PF00873.19	gi|298675646|ref|YP_003727396.1|	-	9.7e-17	60.0	13.1	5.5e-11	40.9	4.4	2.2	2	0	0	2	2	2	2	AcrB/AcrD/AcrF	family
Sterol-sensing	PF12349.8	gi|298675646|ref|YP_003727396.1|	-	6.5e-15	55.3	7.5	4.6e-08	33.1	3.9	2.4	2	0	0	2	2	2	2	Sterol-sensing	domain	of	SREBP	cleavage-activation
SecD_SecF	PF02355.16	gi|298675646|ref|YP_003727396.1|	-	1e-11	44.6	7.6	1e-11	44.6	7.6	3.0	3	0	0	3	3	3	1	Protein	export	membrane	protein
Patched	PF02460.18	gi|298675646|ref|YP_003727396.1|	-	1.3e-09	36.7	13.3	4.8e-05	21.7	2.4	2.3	2	0	0	2	2	2	2	Patched	family
Phage_holin_3_6	PF07332.11	gi|298675646|ref|YP_003727396.1|	-	0.0016	18.5	14.8	1.4	8.9	1.9	4.6	5	0	0	5	5	5	2	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
Fzo_mitofusin	PF04799.13	gi|298675646|ref|YP_003727396.1|	-	2.1	7.9	7.6	0.22	11.1	0.6	2.9	4	0	0	4	4	4	0	fzo-like	conserved	region
Saf_2TM	PF18303.1	gi|298675646|ref|YP_003727396.1|	-	7.1	6.2	9.2	2.5	7.7	0.1	3.5	4	0	0	4	4	4	0	SAVED-fused	2TM	effector	domain
CARDB	PF07705.11	gi|298675647|ref|YP_003727397.1|	-	4.1e-07	30.2	4.3	0.0016	18.7	0.6	2.7	2	1	1	3	3	3	2	CARDB
NPCBM_assoc	PF10633.9	gi|298675647|ref|YP_003727397.1|	-	2e-06	27.9	0.0	0.012	15.8	0.0	3.4	3	1	0	3	3	3	2	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
DUF1573	PF07610.11	gi|298675647|ref|YP_003727397.1|	-	0.013	15.6	1.1	1.5	8.9	0.1	3.5	3	2	0	3	3	3	0	Protein	of	unknown	function	(DUF1573)
DUF11	PF01345.18	gi|298675647|ref|YP_003727397.1|	-	0.023	15.0	0.1	0.2	12.0	0.1	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF11
ASH	PF15780.5	gi|298675647|ref|YP_003727397.1|	-	0.031	14.5	0.0	0.46	10.7	0.0	2.7	2	1	1	3	3	3	0	Abnormal	spindle-like	microcephaly-assoc'd,	ASPM-SPD-2-Hydin
DUF5114	PF17141.4	gi|298675647|ref|YP_003727397.1|	-	0.29	11.7	4.1	14	6.3	0.5	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF5114)
NPCBM_assoc	PF10633.9	gi|298675648|ref|YP_003727398.1|	-	2.9e-05	24.2	0.8	0.54	10.6	0.1	3.2	3	0	0	3	3	3	2	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
DUF824	PF05688.11	gi|298675648|ref|YP_003727398.1|	-	0.029	14.2	0.2	0.19	11.6	0.0	2.2	2	0	0	2	2	2	0	Salmonella	repeat	of	unknown	function	(DUF824)
YtkA	PF13115.6	gi|298675648|ref|YP_003727398.1|	-	0.038	14.6	0.7	0.57	10.8	0.0	3.0	4	0	0	4	4	4	0	YtkA-like
Lip_prot_lig_C	PF10437.9	gi|298675648|ref|YP_003727398.1|	-	0.094	12.7	0.0	3.6	7.6	0.0	2.4	2	0	0	2	2	2	0	Bacterial	lipoate	protein	ligase	C-terminus
TOBE	PF03459.17	gi|298675649|ref|YP_003727399.1|	-	1.3e-13	51.0	0.1	2.1e-13	50.3	0.1	1.4	1	0	0	1	1	1	1	TOBE	domain
HTH_1	PF00126.27	gi|298675649|ref|YP_003727399.1|	-	3.1e-09	36.7	0.0	5.2e-09	35.9	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_23	PF13384.6	gi|298675649|ref|YP_003727399.1|	-	0.0056	16.4	0.1	0.012	15.4	0.1	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
14-3-3	PF00244.20	gi|298675649|ref|YP_003727399.1|	-	0.025	14.1	0.3	0.035	13.6	0.3	1.2	1	0	0	1	1	1	0	14-3-3	protein
MazE_antitoxin	PF04014.18	gi|298675649|ref|YP_003727399.1|	-	0.075	13.0	0.4	0.2	11.6	0.1	2.0	2	0	0	2	2	2	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
ABC_tran	PF00005.27	gi|298675650|ref|YP_003727400.1|	-	1.9e-32	112.6	0.0	3.2e-32	111.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
TOBE	PF03459.17	gi|298675650|ref|YP_003727400.1|	-	4.6e-15	55.7	2.3	2.5e-14	53.3	0.0	2.8	3	0	0	3	3	3	1	TOBE	domain
TOBE_2	PF08402.10	gi|298675650|ref|YP_003727400.1|	-	3.8e-09	36.6	0.0	9.1e-09	35.4	0.0	1.7	1	0	0	1	1	1	1	TOBE	domain
AAA_21	PF13304.6	gi|298675650|ref|YP_003727400.1|	-	1e-08	35.3	1.5	0.00024	21.0	0.1	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_30	PF13604.6	gi|298675650|ref|YP_003727400.1|	-	0.0022	17.8	0.0	0.26	11.0	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
SMC_N	PF02463.19	gi|298675650|ref|YP_003727400.1|	-	0.0024	17.3	0.1	0.031	13.7	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|298675650|ref|YP_003727400.1|	-	0.019	14.7	0.1	0.042	13.6	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Zeta_toxin	PF06414.12	gi|298675650|ref|YP_003727400.1|	-	0.056	12.7	0.0	0.22	10.8	0.0	1.8	2	0	0	2	2	2	0	Zeta	toxin
AAA	PF00004.29	gi|298675650|ref|YP_003727400.1|	-	0.085	13.3	0.1	0.47	10.9	0.1	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SbcCD_C	PF13558.6	gi|298675650|ref|YP_003727400.1|	-	0.099	12.9	0.0	1.4	9.2	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_23	PF13476.6	gi|298675650|ref|YP_003727400.1|	-	0.1	13.1	0.3	0.18	12.3	0.3	1.4	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.29	gi|298675650|ref|YP_003727400.1|	-	0.11	12.3	0.0	0.21	11.4	0.0	1.4	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_16	PF13191.6	gi|298675650|ref|YP_003727400.1|	-	0.15	12.5	0.0	0.29	11.5	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
BPD_transp_1	PF00528.22	gi|298675651|ref|YP_003727401.1|	-	5.8e-17	62.0	10.9	5.8e-17	62.0	10.9	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_11	PF13531.6	gi|298675652|ref|YP_003727402.1|	-	1e-30	107.2	0.0	1.3e-30	106.9	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.25	gi|298675652|ref|YP_003727402.1|	-	3.1e-07	30.7	0.0	5e-07	30.0	0.0	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
DUF4064	PF13273.6	gi|298675652|ref|YP_003727402.1|	-	0.02	15.1	0.4	0.05	13.9	0.4	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
SBP_bac_6	PF13343.6	gi|298675652|ref|YP_003727402.1|	-	0.086	12.2	0.0	0.32	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	extracellular	solute-binding	protein
PhoU	PF01895.19	gi|298675653|ref|YP_003727403.1|	-	1.2e-28	99.4	9.8	5.7e-19	68.4	1.3	2.4	2	0	0	2	2	2	2	PhoU	domain
MazE_antitoxin	PF04014.18	gi|298675653|ref|YP_003727403.1|	-	7.4e-09	35.3	0.0	1.4e-08	34.4	0.0	1.5	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
DUF2935	PF11155.8	gi|298675653|ref|YP_003727403.1|	-	0.055	13.8	0.8	1	9.7	0.8	2.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
HAMP	PF00672.25	gi|298675653|ref|YP_003727403.1|	-	0.061	13.7	0.7	3.5	8.1	0.0	2.7	3	0	0	3	3	3	0	HAMP	domain
DUF5405	PF17399.2	gi|298675653|ref|YP_003727403.1|	-	0.087	13.1	0.6	0.24	11.7	0.4	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5405)
TcpS	PF17456.2	gi|298675653|ref|YP_003727403.1|	-	0.089	12.8	2.8	0.12	12.4	0.6	2.1	2	0	0	2	2	2	0	Toxin-coregulated	pilus	protein	S
DUF643	PF04867.12	gi|298675653|ref|YP_003727403.1|	-	0.27	11.9	2.9	1.2	9.8	0.8	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF643)
MMR_HSR1	PF01926.23	gi|298675654|ref|YP_003727404.1|	-	2.8e-15	56.4	0.0	3.9e-15	55.9	0.0	1.2	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU	PF00009.27	gi|298675654|ref|YP_003727404.1|	-	1.6e-13	50.6	1.2	2.4e-05	24.0	0.1	2.9	2	1	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
Arf	PF00025.21	gi|298675654|ref|YP_003727404.1|	-	1.1e-07	31.4	0.0	0.0043	16.5	0.0	2.4	2	0	0	2	2	2	2	ADP-ribosylation	factor	family
RsgA_GTPase	PF03193.16	gi|298675654|ref|YP_003727404.1|	-	1.9e-06	27.9	0.1	0.016	15.2	0.0	2.1	2	0	0	2	2	2	2	RsgA	GTPase
Roc	PF08477.13	gi|298675654|ref|YP_003727404.1|	-	5.9e-05	23.3	0.0	0.018	15.3	0.0	2.3	2	0	0	2	2	2	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
FeoB_N	PF02421.18	gi|298675654|ref|YP_003727404.1|	-	0.00022	20.8	0.4	0.003	17.1	0.4	2.4	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
Septin	PF00735.18	gi|298675654|ref|YP_003727404.1|	-	0.00052	19.4	0.0	0.00078	18.8	0.0	1.3	1	0	0	1	1	1	1	Septin
AAA_24	PF13479.6	gi|298675654|ref|YP_003727404.1|	-	0.00054	19.7	0.1	0.0021	17.8	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
MMR_HSR1_Xtn	PF16897.5	gi|298675654|ref|YP_003727404.1|	-	0.0011	19.0	0.0	0.0018	18.2	0.0	1.4	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
SRPRB	PF09439.10	gi|298675654|ref|YP_003727404.1|	-	0.0039	16.6	0.0	0.16	11.4	0.0	2.3	2	1	0	2	2	2	1	Signal	recognition	particle	receptor	beta	subunit
AAA	PF00004.29	gi|298675654|ref|YP_003727404.1|	-	0.0053	17.2	0.0	0.016	15.6	0.0	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|298675654|ref|YP_003727404.1|	-	0.0087	16.0	0.1	0.017	15.0	0.1	1.7	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
NB-ARC	PF00931.22	gi|298675654|ref|YP_003727404.1|	-	0.011	15.0	0.0	0.018	14.2	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_25	PF13481.6	gi|298675654|ref|YP_003727404.1|	-	0.011	15.3	0.1	0.8	9.3	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|298675654|ref|YP_003727404.1|	-	0.013	16.0	0.0	0.021	15.3	0.0	1.5	1	1	0	1	1	1	0	ABC	transporter
Dynamin_N	PF00350.23	gi|298675654|ref|YP_003727404.1|	-	0.014	15.5	0.0	2.5	8.1	0.0	2.3	1	1	1	2	2	2	0	Dynamin	family
AAA_18	PF13238.6	gi|298675654|ref|YP_003727404.1|	-	0.014	15.9	0.0	0.05	14.1	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|298675654|ref|YP_003727404.1|	-	0.018	15.4	0.0	0.028	14.8	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
RNA_helicase	PF00910.22	gi|298675654|ref|YP_003727404.1|	-	0.037	14.4	0.0	0.078	13.4	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
NTPase_1	PF03266.15	gi|298675654|ref|YP_003727404.1|	-	0.072	13.0	0.0	0.19	11.6	0.0	1.8	2	0	0	2	2	2	0	NTPase
TniB	PF05621.11	gi|298675654|ref|YP_003727404.1|	-	0.078	12.4	0.1	0.46	9.9	0.0	2.1	2	1	0	2	2	2	0	Bacterial	TniB	protein
Parvo_NS1	PF01057.17	gi|298675654|ref|YP_003727404.1|	-	0.095	11.8	0.1	0.089	11.9	0.1	1.4	1	1	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
MeaB	PF03308.16	gi|298675654|ref|YP_003727404.1|	-	0.11	11.5	0.0	1.2	8.1	0.0	2.3	2	1	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
PPV_E1_C	PF00519.17	gi|298675654|ref|YP_003727404.1|	-	0.12	11.2	0.0	0.19	10.5	0.0	1.2	1	0	0	1	1	1	0	Papillomavirus	helicase
AAA_22	PF13401.6	gi|298675654|ref|YP_003727404.1|	-	0.15	12.3	0.0	0.68	10.2	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
MnmE_helical	PF12631.7	gi|298675654|ref|YP_003727404.1|	-	0.16	12.1	0.0	0.21	11.7	0.0	1.2	1	0	0	1	1	1	0	MnmE	helical	domain
DUF2073	PF09846.9	gi|298675655|ref|YP_003727405.1|	-	2.3e-44	149.6	0.3	2.6e-44	149.4	0.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2073)
HA70_C	PF17993.1	gi|298675656|ref|YP_003727406.1|	-	0.0062	16.6	0.6	0.009	16.1	0.6	1.3	1	0	0	1	1	1	1	Haemagglutinin	70	C-terminal	domain
SIS	PF01380.22	gi|298675657|ref|YP_003727407.1|	-	5.5e-18	65.1	0.0	9.9e-18	64.3	0.0	1.4	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.6	gi|298675657|ref|YP_003727407.1|	-	0.014	15.4	3.2	0.024	14.7	0.4	2.2	1	1	1	2	2	2	0	SIS	domain
THF_DHG_CYH_C	PF02882.19	gi|298675657|ref|YP_003727407.1|	-	0.041	13.2	0.2	0.058	12.7	0.2	1.3	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Epimerase	PF01370.21	gi|298675657|ref|YP_003727407.1|	-	0.12	11.8	0.0	0.18	11.2	0.0	1.3	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Aminotran_1_2	PF00155.21	gi|298675658|ref|YP_003727408.1|	-	1.4e-65	221.9	0.0	1.6e-65	221.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|298675658|ref|YP_003727408.1|	-	6.7e-12	45.0	0.0	1.3e-11	44.1	0.0	1.4	1	0	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|298675658|ref|YP_003727408.1|	-	1e-09	38.2	0.0	1.6e-09	37.6	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.20	gi|298675658|ref|YP_003727408.1|	-	3.8e-06	25.7	0.1	5.9e-06	25.1	0.1	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|298675658|ref|YP_003727408.1|	-	0.0043	16.4	0.0	0.007	15.7	0.0	1.6	1	1	0	1	1	1	1	Beta-eliminating	lyase
DUF1246	PF06849.12	gi|298675658|ref|YP_003727408.1|	-	0.037	14.0	0.0	0.27	11.2	0.0	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1246)
Zfx_Zfy_act	PF04704.13	gi|298675658|ref|YP_003727408.1|	-	0.063	12.4	1.2	0.33	10.0	0.4	2.1	2	0	0	2	2	2	0	Zfx	/	Zfy	transcription	activation	region
NOG1_N	PF17835.1	gi|298675659|ref|YP_003727409.1|	-	5.3e-51	172.7	0.5	8e-51	172.2	0.5	1.3	1	0	0	1	1	1	1	NOG1	N-terminal	helical	domain
NOG1	PF06858.14	gi|298675659|ref|YP_003727409.1|	-	3.1e-22	78.1	0.1	7.1e-22	77.0	0.1	1.6	1	0	0	1	1	1	1	Nucleolar	GTP-binding	protein	1	(NOG1)
MMR_HSR1	PF01926.23	gi|298675659|ref|YP_003727409.1|	-	2.5e-17	63.0	0.0	5.7e-17	61.8	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|298675659|ref|YP_003727409.1|	-	4.9e-08	32.6	0.0	1.2e-07	31.3	0.0	1.6	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.23	gi|298675659|ref|YP_003727409.1|	-	0.012	15.7	0.1	0.47	10.5	0.0	2.5	1	1	1	2	2	2	0	Dynamin	family
AIG1	PF04548.16	gi|298675659|ref|YP_003727409.1|	-	0.015	14.7	0.0	0.03	13.7	0.0	1.5	1	0	0	1	1	1	0	AIG1	family
ISN1	PF06437.11	gi|298675659|ref|YP_003727409.1|	-	0.099	11.5	0.0	0.15	10.9	0.0	1.3	1	0	0	1	1	1	0	IMP-specific	5'-nucleotidase
HrcA_DNA-bdg	PF03444.15	gi|298675660|ref|YP_003727410.1|	-	1.3e-36	124.1	0.6	3.3e-36	122.8	0.3	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CBS	PF00571.28	gi|298675660|ref|YP_003727410.1|	-	1.4e-22	79.9	2.1	6.2e-12	45.8	0.3	2.6	2	0	0	2	2	2	2	CBS	domain
Rrf2	PF02082.20	gi|298675660|ref|YP_003727410.1|	-	2.7e-08	34.0	0.1	1.8e-07	31.4	0.1	2.2	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_11	PF08279.12	gi|298675660|ref|YP_003727410.1|	-	1.1e-05	25.3	0.1	2.3e-05	24.3	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.19	gi|298675660|ref|YP_003727410.1|	-	0.033	14.1	0.0	0.089	12.7	0.0	1.8	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|298675660|ref|YP_003727410.1|	-	0.15	12.0	0.0	0.4	10.6	0.0	1.7	1	0	0	1	1	1	0	MarR	family
Sigma70_r4_2	PF08281.12	gi|298675660|ref|YP_003727410.1|	-	0.22	11.2	0.1	1.7	8.4	0.0	2.5	3	0	0	3	3	3	0	Sigma-70,	region	4
PRA-PH	PF01503.17	gi|298675661|ref|YP_003727411.1|	-	3.1e-16	59.6	0.2	3.5e-16	59.4	0.2	1.0	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG	PF03819.17	gi|298675661|ref|YP_003727411.1|	-	0.0013	18.9	1.1	0.0013	18.9	1.1	1.6	2	0	0	2	2	2	1	MazG	nucleotide	pyrophosphohydrolase	domain
MKRN1_C	PF15815.5	gi|298675661|ref|YP_003727411.1|	-	0.12	12.8	0.4	0.21	12.0	0.2	1.5	2	0	0	2	2	2	0	E3	ubiquitin-protein	ligase	makorin-1,	C-terminal
Aconitase	PF00330.20	gi|298675662|ref|YP_003727412.1|	-	9.6e-98	328.2	0.5	8.4e-96	321.7	0.5	2.0	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|298675662|ref|YP_003727412.1|	-	0.0059	15.4	0.0	0.0096	14.7	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
TrkA_N	PF02254.18	gi|298675663|ref|YP_003727413.1|	-	2e-26	92.6	0.7	5.3e-26	91.2	0.3	2.0	2	0	0	2	2	1	1	TrkA-N	domain
DHH	PF01368.20	gi|298675663|ref|YP_003727413.1|	-	3.4e-16	59.3	1.1	7.3e-15	55.1	0.9	2.4	2	0	0	2	2	2	1	DHH	family
DHHA1	PF02272.19	gi|298675663|ref|YP_003727413.1|	-	1.1e-12	48.5	1.7	2.6e-12	47.3	0.1	2.4	3	0	0	3	3	3	1	DHHA1	domain
Sacchrp_dh_NADP	PF03435.18	gi|298675663|ref|YP_003727413.1|	-	0.00013	22.2	0.0	0.00031	21.0	0.0	1.7	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
Epimerase	PF01370.21	gi|298675663|ref|YP_003727413.1|	-	0.00044	19.8	0.0	0.001	18.6	0.0	1.7	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
F420_oxidored	PF03807.17	gi|298675663|ref|YP_003727413.1|	-	0.00055	20.5	0.0	0.0017	18.9	0.0	2.0	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
ApbA	PF02558.16	gi|298675663|ref|YP_003727413.1|	-	0.0012	18.5	0.0	0.0025	17.5	0.0	1.5	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.14	gi|298675663|ref|YP_003727413.1|	-	0.0068	16.0	0.0	0.015	14.9	0.0	1.5	1	1	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
XdhC_C	PF13478.6	gi|298675663|ref|YP_003727413.1|	-	0.0078	16.7	0.0	0.061	13.8	0.0	2.3	1	1	2	3	3	3	1	XdhC	Rossmann	domain
Pyr_redox	PF00070.27	gi|298675663|ref|YP_003727413.1|	-	0.011	16.3	0.0	1	9.9	0.0	3.2	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|298675663|ref|YP_003727413.1|	-	0.014	14.7	0.0	0.027	13.8	0.0	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.6	gi|298675663|ref|YP_003727413.1|	-	0.016	15.6	0.0	0.047	14.1	0.0	1.7	1	0	0	1	1	1	0	Putative	NAD(P)-binding
NAD_Gly3P_dh_N	PF01210.23	gi|298675663|ref|YP_003727413.1|	-	0.018	15.1	0.0	0.14	12.1	0.0	2.1	1	1	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
2-Hacid_dh_C	PF02826.19	gi|298675663|ref|YP_003727413.1|	-	0.022	14.1	0.0	0.059	12.7	0.0	1.7	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TyeA	PF09059.10	gi|298675663|ref|YP_003727413.1|	-	0.032	14.3	0.0	0.096	12.8	0.0	1.8	1	0	0	1	1	1	0	TyeA
adh_short	PF00106.25	gi|298675663|ref|YP_003727413.1|	-	0.06	12.8	0.0	0.11	11.9	0.0	1.5	1	0	0	1	1	1	0	short	chain	dehydrogenase
NAD_binding_2	PF03446.15	gi|298675663|ref|YP_003727413.1|	-	0.062	13.5	0.0	0.12	12.6	0.0	1.5	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
adh_short_C2	PF13561.6	gi|298675663|ref|YP_003727413.1|	-	0.068	12.7	0.0	0.14	11.7	0.0	1.6	1	0	0	1	1	1	0	Enoyl-(Acyl	carrier	protein)	reductase
Carb_kinase	PF01256.17	gi|298675664|ref|YP_003727414.1|	-	2.8e-55	187.4	0.1	4.4e-55	186.8	0.1	1.3	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.15	gi|298675664|ref|YP_003727414.1|	-	2.1e-40	138.4	0.7	1.3e-39	135.8	0.0	2.2	2	1	0	2	2	2	1	YjeF-related	protein	N-terminus
HK	PF02110.15	gi|298675664|ref|YP_003727414.1|	-	6.8e-06	25.6	0.3	6.4e-05	22.4	0.1	2.4	2	1	1	3	3	3	1	Hydroxyethylthiazole	kinase	family
Herpes_MCP	PF03122.14	gi|298675664|ref|YP_003727414.1|	-	0.23	8.9	0.0	0.31	8.5	0.0	1.1	1	0	0	1	1	1	0	Herpes	virus	major	capsid	protein
MoaC	PF01967.21	gi|298675666|ref|YP_003727416.1|	-	5.7e-49	165.7	4.5	6.5e-49	165.5	4.5	1.0	1	0	0	1	1	1	1	MoaC	family
Pribosyltran_N	PF13793.6	gi|298675667|ref|YP_003727417.1|	-	4.8e-26	91.0	0.1	1.2e-22	80.1	0.0	2.2	2	0	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.27	gi|298675667|ref|YP_003727417.1|	-	1e-19	70.6	0.2	1.8e-19	69.8	0.2	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.6	gi|298675667|ref|YP_003727417.1|	-	1.9e-07	31.3	1.1	3.7e-07	30.4	1.1	1.4	1	0	0	1	1	1	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.6	gi|298675667|ref|YP_003727417.1|	-	5.3e-06	26.0	0.1	9.7e-06	25.2	0.1	1.4	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|298675667|ref|YP_003727417.1|	-	0.0082	15.7	0.1	0.018	14.6	0.1	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase
HhH-GPD	PF00730.25	gi|298675669|ref|YP_003727419.1|	-	3.6e-17	62.8	0.0	5.4e-17	62.2	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.23	gi|298675669|ref|YP_003727419.1|	-	2.9e-05	23.7	0.0	5.9e-05	22.7	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|298675669|ref|YP_003727419.1|	-	0.0046	17.5	0.0	0.018	15.6	0.0	1.9	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
CRAL_TRIO_N	PF03765.15	gi|298675669|ref|YP_003727419.1|	-	0.3	11.3	2.1	8	6.7	0.3	2.5	2	0	0	2	2	2	0	CRAL/TRIO,	N-terminal	domain
TPD	PF14811.6	gi|298675670|ref|YP_003727420.1|	-	3.1e-49	166.3	5.1	3.1e-49	166.3	5.1	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	TPD	sequence-motif
RNA_pol_3_Rpc31	PF11705.8	gi|298675670|ref|YP_003727420.1|	-	0.00028	21.2	0.7	0.00039	20.8	0.7	1.2	1	0	0	1	1	1	1	DNA-directed	RNA	polymerase	III	subunit	Rpc31
HTH_40	PF14493.6	gi|298675670|ref|YP_003727420.1|	-	0.016	15.6	0.4	0.048	14.1	0.4	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
IF2_N	PF04760.15	gi|298675670|ref|YP_003727420.1|	-	0.57	10.0	5.9	0.81	9.6	0.3	3.2	3	1	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
DUF3130	PF11328.8	gi|298675671|ref|YP_003727421.1|	-	0.083	13.1	0.0	0.13	12.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3130
DIM1	PF02966.16	gi|298675672|ref|YP_003727422.1|	-	0.13	12.0	0.0	0.14	11.9	0.0	1.0	1	0	0	1	1	1	0	Mitosis	protein	DIM1
tRNA-synt_1f	PF01921.18	gi|298675673|ref|YP_003727423.1|	-	1e-128	429.3	0.0	4.9e-127	423.8	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1g	PF09334.11	gi|298675673|ref|YP_003727423.1|	-	3e-08	32.8	0.1	0.00035	19.4	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|298675673|ref|YP_003727423.1|	-	2.9e-06	26.8	0.0	0.047	13.0	0.0	2.5	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
Transpos_assoc	PF13963.6	gi|298675673|ref|YP_003727423.1|	-	0.13	12.6	0.0	0.37	11.1	0.0	1.7	1	0	0	1	1	1	0	Transposase-associated	domain
Methyltransf_11	PF08241.12	gi|298675674|ref|YP_003727424.1|	-	7.4e-21	74.6	0.0	1.3e-20	73.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|298675674|ref|YP_003727424.1|	-	2.7e-19	69.6	0.0	7.3e-19	68.3	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298675674|ref|YP_003727424.1|	-	1.6e-15	57.4	0.0	1.9e-15	57.1	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298675674|ref|YP_003727424.1|	-	2.9e-15	56.4	0.0	1.8e-14	53.8	0.0	1.9	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|298675674|ref|YP_003727424.1|	-	2.5e-11	44.2	0.0	4.6e-11	43.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|298675674|ref|YP_003727424.1|	-	3e-09	36.6	0.0	4.1e-09	36.1	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Ubie_methyltran	PF01209.18	gi|298675674|ref|YP_003727424.1|	-	2e-07	30.6	0.0	3.1e-07	30.0	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_9	PF08003.11	gi|298675674|ref|YP_003727424.1|	-	1.2e-06	27.7	0.0	1.4e-06	27.5	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
TehB	PF03848.14	gi|298675674|ref|YP_003727424.1|	-	3.3e-06	26.7	0.0	4.4e-06	26.2	0.0	1.3	1	1	0	1	1	1	1	Tellurite	resistance	protein	TehB
PrmA	PF06325.13	gi|298675674|ref|YP_003727424.1|	-	9.8e-05	21.9	0.0	0.00016	21.2	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.14	gi|298675674|ref|YP_003727424.1|	-	0.00019	21.0	0.0	0.00027	20.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
MetW	PF07021.12	gi|298675674|ref|YP_003727424.1|	-	0.00022	20.9	0.0	0.00041	20.0	0.0	1.6	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
TPMT	PF05724.11	gi|298675674|ref|YP_003727424.1|	-	0.002	17.8	0.0	0.0029	17.3	0.0	1.3	1	0	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
CheR	PF01739.18	gi|298675674|ref|YP_003727424.1|	-	0.02	14.4	0.1	0.64	9.5	0.0	2.7	1	1	1	2	2	2	0	CheR	methyltransferase,	SAM	binding	domain
Methyltransf_18	PF12847.7	gi|298675674|ref|YP_003727424.1|	-	0.029	14.3	0.1	0.086	12.8	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
BofA	PF07441.11	gi|298675675|ref|YP_003727425.1|	-	9.8e-11	41.7	25.1	1.1e-10	41.5	25.1	1.0	1	0	0	1	1	1	1	SigmaK-factor	processing	regulatory	protein	BofA
Tweety	PF04906.13	gi|298675675|ref|YP_003727425.1|	-	7.2	5.2	7.6	7.9	5.0	7.6	1.2	1	0	0	1	1	1	0	Tweety
DUF2530	PF10745.9	gi|298675675|ref|YP_003727425.1|	-	8	6.8	11.0	0.59	10.4	4.5	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2530)
Nuc_deoxyrib_tr	PF05014.15	gi|298675676|ref|YP_003727426.1|	-	2.8e-07	30.6	0.0	3.2e-07	30.4	0.0	1.1	1	0	0	1	1	1	1	Nucleoside	2-deoxyribosyltransferase
Prenylcys_lyase	PF07156.14	gi|298675676|ref|YP_003727426.1|	-	0.044	12.9	0.2	0.049	12.7	0.2	1.2	1	0	0	1	1	1	0	Prenylcysteine	lyase
Peptidase_U32	PF01136.19	gi|298675677|ref|YP_003727427.1|	-	1.9e-122	406.8	0.0	1.2e-84	283.1	0.0	2.2	2	0	0	2	2	2	2	Peptidase	family	U32
DUF3656	PF12392.8	gi|298675677|ref|YP_003727427.1|	-	9.4e-26	90.6	0.3	2.7e-25	89.1	0.3	1.8	1	0	0	1	1	1	1	Collagenase
Phage_Coat_B	PF05356.11	gi|298675677|ref|YP_003727427.1|	-	0.034	14.1	0.0	2.4	8.1	0.0	2.8	2	0	0	2	2	2	0	Phage	Coat	protein	B
DUF2981	PF11200.8	gi|298675678|ref|YP_003727428.1|	-	2.5	7.7	4.6	3.3	7.4	0.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2981)
His_biosynth	PF00977.21	gi|298675680|ref|YP_003727430.1|	-	2.8e-87	292.0	0.4	3.3e-87	291.8	0.4	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
ThiG	PF05690.14	gi|298675680|ref|YP_003727430.1|	-	9.7e-07	28.3	0.2	0.0065	15.8	0.0	2.2	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.15	gi|298675680|ref|YP_003727430.1|	-	5.6e-06	26.0	0.7	0.018	14.5	0.1	2.2	2	0	0	2	2	2	2	Nitronate	monooxygenase
G3P_antiterm	PF04309.12	gi|298675680|ref|YP_003727430.1|	-	5e-05	22.8	0.2	0.0014	18.1	0.1	2.1	2	0	0	2	2	2	1	Glycerol-3-phosphate	responsive	antiterminator
Dus	PF01207.17	gi|298675680|ref|YP_003727430.1|	-	0.00019	20.7	0.1	0.00066	18.9	0.0	1.8	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
DHO_dh	PF01180.21	gi|298675680|ref|YP_003727430.1|	-	0.00058	19.2	0.1	0.056	12.6	0.1	2.1	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
IMPDH	PF00478.25	gi|298675680|ref|YP_003727430.1|	-	0.00064	18.8	0.7	0.13	11.2	0.1	2.1	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
TMP-TENI	PF02581.17	gi|298675680|ref|YP_003727430.1|	-	0.0037	16.6	0.3	0.24	10.7	0.1	2.2	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase
SBP_bac_3	PF00497.20	gi|298675680|ref|YP_003727430.1|	-	0.02	14.3	0.0	0.037	13.4	0.0	1.3	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	3
DUF1614	PF07758.11	gi|298675681|ref|YP_003727431.1|	-	4e-57	192.9	13.1	4e-57	192.9	13.1	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1614)
DNase-RNase	PF02577.14	gi|298675682|ref|YP_003727432.1|	-	1.1e-40	138.3	0.1	1.2e-40	138.2	0.1	1.0	1	0	0	1	1	1	1	Bifunctional	nuclease
OrfB_Zn_ribbon	PF07282.11	gi|298675683|ref|YP_003727433.1|	-	2.3e-18	65.9	0.3	2.3e-18	65.9	0.3	1.9	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675683|ref|YP_003727433.1|	-	1.9e-13	50.7	1.7	3.6e-13	49.8	1.7	1.5	1	0	0	1	1	1	1	Probable	transposase
HTH_OrfB_IS605	PF12323.8	gi|298675683|ref|YP_003727433.1|	-	3.5e-08	32.8	0.1	6.8e-08	31.9	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Y1_Tnp	PF01797.16	gi|298675684|ref|YP_003727434.1|	-	2.6e-35	121.1	0.3	3e-35	120.9	0.3	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
PCMT	PF01135.19	gi|298675685|ref|YP_003727435.1|	-	6.6e-71	238.4	0.0	7.9e-71	238.1	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.6	gi|298675685|ref|YP_003727435.1|	-	3.8e-12	46.2	0.0	5.5e-12	45.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
GCD14	PF08704.10	gi|298675685|ref|YP_003727435.1|	-	2.4e-07	30.7	0.0	3e-07	30.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Ubie_methyltran	PF01209.18	gi|298675685|ref|YP_003727435.1|	-	4e-07	29.6	0.0	5.2e-07	29.2	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.6	gi|298675685|ref|YP_003727435.1|	-	5.1e-07	30.3	0.0	8.8e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|298675685|ref|YP_003727435.1|	-	2.2e-06	27.5	0.0	3.5e-06	26.8	0.0	1.4	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
RrnaAD	PF00398.20	gi|298675685|ref|YP_003727435.1|	-	2.6e-06	26.7	0.0	3.5e-06	26.3	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Fibrillarin	PF01269.17	gi|298675685|ref|YP_003727435.1|	-	2.7e-05	23.4	0.1	3.9e-05	22.9	0.1	1.2	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_11	PF08241.12	gi|298675685|ref|YP_003727435.1|	-	0.0015	19.1	0.0	0.0046	17.6	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.17	gi|298675685|ref|YP_003727435.1|	-	0.0018	17.5	0.0	0.0025	17.0	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_32	PF13679.6	gi|298675685|ref|YP_003727435.1|	-	0.0044	17.0	0.0	0.006	16.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|298675685|ref|YP_003727435.1|	-	0.0047	16.5	0.0	0.0076	15.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Met_10	PF02475.16	gi|298675685|ref|YP_003727435.1|	-	0.0068	16.2	0.0	0.0098	15.7	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_24	PF13578.6	gi|298675685|ref|YP_003727435.1|	-	0.014	16.4	0.0	0.026	15.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
CMAS	PF02353.20	gi|298675685|ref|YP_003727435.1|	-	0.016	14.5	0.0	0.022	14.1	0.0	1.1	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_23	PF13489.6	gi|298675685|ref|YP_003727435.1|	-	0.084	12.7	0.0	0.21	11.4	0.0	1.7	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_4	PF02390.17	gi|298675685|ref|YP_003727435.1|	-	0.22	11.0	0.0	0.33	10.4	0.0	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
Tox-REase-2	PF15646.6	gi|298675686|ref|YP_003727436.1|	-	0.059	13.5	0.5	0.2	11.8	0.0	2.1	1	1	2	3	3	3	0	Restriction	endonuclease	fold	toxin	2
zinc_ribbon_4	PF13717.6	gi|298675686|ref|YP_003727436.1|	-	1.1	9.2	3.7	6.1	6.8	3.7	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
Arginase	PF00491.21	gi|298675687|ref|YP_003727437.1|	-	3.9e-74	249.6	0.0	4.4e-74	249.5	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
LDcluster4	PF18306.1	gi|298675687|ref|YP_003727437.1|	-	0.0014	18.2	0.0	0.0021	17.6	0.0	1.2	1	0	0	1	1	1	1	SLOG	cluster4	family
eIF-5a	PF01287.20	gi|298675688|ref|YP_003727438.1|	-	1.6e-08	34.5	0.3	3.2e-08	33.5	0.3	1.4	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.12	gi|298675688|ref|YP_003727438.1|	-	0.00016	21.6	0.1	0.00028	20.8	0.1	1.4	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	KOW-like	domain
AFOR_C	PF01314.18	gi|298675689|ref|YP_003727439.1|	-	2.3e-93	313.3	0.0	3.1e-93	312.8	0.0	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|298675689|ref|YP_003727439.1|	-	5.9e-68	228.6	0.1	9e-68	228.1	0.1	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
Na_H_Exchanger	PF00999.21	gi|298675690|ref|YP_003727440.1|	-	4.2e-47	160.8	48.1	4.9e-47	160.5	48.1	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
Fer4_13	PF13370.6	gi|298675691|ref|YP_003727441.1|	-	6.4e-20	71.4	7.2	7.7e-20	71.2	7.2	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|298675691|ref|YP_003727441.1|	-	6.1e-09	36.5	5.1	8.6e-09	36.0	5.1	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4	PF00037.27	gi|298675691|ref|YP_003727441.1|	-	0.00035	20.3	8.7	0.0043	16.8	1.2	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298675691|ref|YP_003727441.1|	-	0.00049	20.1	2.7	0.0013	18.8	2.7	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298675691|ref|YP_003727441.1|	-	0.0011	19.0	4.8	0.066	13.3	1.1	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675691|ref|YP_003727441.1|	-	0.0018	18.3	1.4	0.0018	18.3	1.4	2.3	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298675691|ref|YP_003727441.1|	-	0.0064	16.6	2.4	0.034	14.3	3.0	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675691|ref|YP_003727441.1|	-	0.013	16.1	4.2	0.06	14.0	4.3	2.0	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675691|ref|YP_003727441.1|	-	0.054	14.4	3.9	7.5	7.6	0.6	2.3	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.6	gi|298675691|ref|YP_003727441.1|	-	0.064	13.4	2.6	0.18	12.0	2.6	1.7	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298675691|ref|YP_003727441.1|	-	5.4	8.2	9.3	21	6.3	2.6	2.4	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298675691|ref|YP_003727441.1|	-	7.4	6.8	9.4	2.5	8.3	1.2	2.5	2	1	0	2	2	2	0	4Fe-4S	binding	domain
DNA_binding_1	PF01035.20	gi|298675692|ref|YP_003727442.1|	-	1.5e-26	92.3	0.0	1.8e-26	92.1	0.0	1.1	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
hSac2	PF12456.8	gi|298675692|ref|YP_003727442.1|	-	0.078	12.7	0.0	0.11	12.2	0.0	1.2	1	0	0	1	1	1	0	Inositol	phosphatase
Sigma70_r4	PF04545.16	gi|298675692|ref|YP_003727442.1|	-	0.083	12.4	0.1	0.14	11.7	0.1	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
CAMSAP_CC1	PF17095.5	gi|298675692|ref|YP_003727442.1|	-	0.91	9.4	4.2	1.7	8.5	4.2	1.4	1	0	0	1	1	1	0	Spectrin-binding	region	of	Ca2+-Calmodulin
Peptidase_M10	PF00413.24	gi|298675693|ref|YP_003727443.1|	-	1.1e-16	61.1	0.0	1.6e-16	60.6	0.0	1.2	1	0	0	1	1	1	1	Matrixin
Astacin	PF01400.24	gi|298675693|ref|YP_003727443.1|	-	0.0021	17.7	0.1	0.0049	16.5	0.0	1.6	2	0	0	2	2	2	1	Astacin	(Peptidase	family	M12A)
Peptidase_M66	PF10462.9	gi|298675693|ref|YP_003727443.1|	-	0.0035	16.4	0.2	0.0046	15.9	0.2	1.2	1	0	0	1	1	1	1	Peptidase	M66
Reprolysin_3	PF13582.6	gi|298675693|ref|YP_003727443.1|	-	0.0077	16.7	0.1	0.0097	16.4	0.1	1.3	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Metallopep	PF12044.8	gi|298675693|ref|YP_003727443.1|	-	0.023	13.3	0.0	0.03	12.9	0.0	1.1	1	0	0	1	1	1	0	Putative	peptidase	family
Peptidase_M57	PF12388.8	gi|298675693|ref|YP_003727443.1|	-	0.031	13.9	0.0	0.036	13.7	0.0	1.2	1	0	0	1	1	1	0	Dual-action	HEIGH	metallo-peptidase
Peptidase_M54	PF07998.11	gi|298675693|ref|YP_003727443.1|	-	0.1	12.5	0.0	0.17	11.8	0.0	1.3	1	0	0	1	1	1	0	Peptidase	family	M54
Reprolysin_5	PF13688.6	gi|298675693|ref|YP_003727443.1|	-	0.13	12.4	0.0	0.17	12.0	0.0	1.2	1	0	0	1	1	1	0	Metallo-peptidase	family	M12
Hydrolase	PF00702.26	gi|298675694|ref|YP_003727444.1|	-	8.2e-18	65.5	0.1	3.4e-17	63.4	0.1	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|298675694|ref|YP_003727444.1|	-	5.6e-05	23.0	6.7	0.053	13.2	0.9	2.8	2	1	1	3	3	3	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|298675694|ref|YP_003727444.1|	-	0.00071	19.6	0.5	0.032	14.3	0.2	2.4	2	0	0	2	2	2	1	HAD-hyrolase-like
HAD_2	PF13419.6	gi|298675694|ref|YP_003727444.1|	-	0.044	13.9	1.8	0.13	12.3	0.6	2.3	2	1	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
ABC_tran	PF00005.27	gi|298675695|ref|YP_003727445.1|	-	7.9e-54	181.9	0.1	8.3e-27	94.4	0.0	2.3	2	0	0	2	2	2	2	ABC	transporter
SMC_N	PF02463.19	gi|298675695|ref|YP_003727445.1|	-	1.3e-05	24.7	1.0	0.17	11.3	0.0	3.0	2	1	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
ATP-synt_ab	PF00006.25	gi|298675695|ref|YP_003727445.1|	-	0.00023	20.9	0.2	0.26	10.9	0.0	2.4	2	0	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
RsgA_GTPase	PF03193.16	gi|298675695|ref|YP_003727445.1|	-	0.00035	20.5	2.9	0.22	11.4	0.0	3.0	2	1	0	2	2	2	2	RsgA	GTPase
PRK	PF00485.18	gi|298675695|ref|YP_003727445.1|	-	0.0012	18.6	0.1	0.64	9.7	0.0	2.4	2	0	0	2	2	2	2	Phosphoribulokinase	/	Uridine	kinase	family
AAA_18	PF13238.6	gi|298675695|ref|YP_003727445.1|	-	0.0022	18.6	0.3	1.4	9.5	0.1	2.9	3	0	0	3	3	3	1	AAA	domain
AAA_21	PF13304.6	gi|298675695|ref|YP_003727445.1|	-	0.0026	17.6	0.0	4	7.2	0.0	3.2	2	1	0	3	3	3	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_30	PF13604.6	gi|298675695|ref|YP_003727445.1|	-	0.003	17.3	2.8	0.22	11.2	0.0	2.8	2	1	0	2	2	2	1	AAA	domain
MobB	PF03205.14	gi|298675695|ref|YP_003727445.1|	-	0.0046	16.8	0.2	4	7.3	0.0	2.5	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_29	PF13555.6	gi|298675695|ref|YP_003727445.1|	-	0.0063	16.2	0.1	2.3	8.1	0.0	2.4	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
ATPase	PF06745.13	gi|298675695|ref|YP_003727445.1|	-	0.0065	15.8	3.3	1.1	8.6	0.1	3.4	2	1	1	3	3	3	1	KaiC
DLIC	PF05783.11	gi|298675695|ref|YP_003727445.1|	-	0.0083	15.0	0.1	0.016	14.0	0.1	1.4	1	0	0	1	1	1	1	Dynein	light	intermediate	chain	(DLIC)
SbcCD_C	PF13558.6	gi|298675695|ref|YP_003727445.1|	-	0.01	16.1	0.0	12	6.2	0.0	3.3	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
Zeta_toxin	PF06414.12	gi|298675695|ref|YP_003727445.1|	-	0.012	14.9	0.1	0.32	10.2	0.0	2.4	2	0	0	2	2	2	0	Zeta	toxin
NB-ARC	PF00931.22	gi|298675695|ref|YP_003727445.1|	-	0.012	14.8	1.4	0.51	9.5	0.0	2.7	2	1	0	2	2	2	0	NB-ARC	domain
AAA_23	PF13476.6	gi|298675695|ref|YP_003727445.1|	-	0.017	15.7	0.8	5.6	7.4	0.1	2.5	2	0	0	2	2	2	0	AAA	domain
DUF87	PF01935.17	gi|298675695|ref|YP_003727445.1|	-	0.029	14.5	4.9	2.6	8.1	0.1	3.3	4	0	0	4	4	4	0	Helicase	HerA,	central	domain
AAA_22	PF13401.6	gi|298675695|ref|YP_003727445.1|	-	0.041	14.1	3.2	2.7	8.3	0.1	3.0	2	2	0	2	2	2	0	AAA	domain
AAA_33	PF13671.6	gi|298675695|ref|YP_003727445.1|	-	0.055	13.6	0.2	2.3	8.3	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|298675695|ref|YP_003727445.1|	-	0.058	13.8	0.2	1.9	8.8	0.0	2.5	2	0	0	2	2	2	0	AAA	ATPase	domain
MMR_HSR1	PF01926.23	gi|298675695|ref|YP_003727445.1|	-	0.08	13.0	2.4	11	6.2	0.0	3.7	4	0	0	4	4	4	0	50S	ribosome-binding	GTPase
AAA_13	PF13166.6	gi|298675695|ref|YP_003727445.1|	-	0.13	10.9	0.3	31	3.0	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
IstB_IS21	PF01695.17	gi|298675695|ref|YP_003727445.1|	-	0.39	10.4	1.6	35	4.1	0.0	3.1	4	0	0	4	4	4	0	IstB-like	ATP	binding	protein
zinc_ribbon_2	PF13240.6	gi|298675695|ref|YP_003727445.1|	-	0.55	10.0	2.6	9	6.2	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.16	gi|298675695|ref|YP_003727445.1|	-	5	7.1	5.4	2.7	7.9	0.3	2.5	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Pro_isomerase	PF00160.21	gi|298675696|ref|YP_003727446.1|	-	4e-06	27.2	0.3	0.37	11.1	0.0	5.0	4	1	1	5	5	5	1	Cyclophilin	type	peptidyl-prolyl	cis-trans	isomerase/CLD
DUF3830	PF12903.7	gi|298675696|ref|YP_003727446.1|	-	0.055	13.1	0.0	0.1	12.3	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3830)
Fer2_4	PF13510.6	gi|298675696|ref|YP_003727446.1|	-	0.064	13.3	0.0	0.14	12.2	0.0	1.6	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
IKI3	PF04762.12	gi|298675696|ref|YP_003727446.1|	-	0.085	10.8	0.0	0.13	10.2	0.0	1.1	1	0	0	1	1	1	0	IKI3	family
DUF2102	PF09875.9	gi|298675697|ref|YP_003727447.1|	-	1.3e-42	143.7	0.0	2.1e-42	143.0	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2102)
DUF2112	PF09885.9	gi|298675698|ref|YP_003727448.1|	-	2.6e-66	222.0	0.0	3e-66	221.8	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2112)
BcrAD_BadFG	PF01869.20	gi|298675699|ref|YP_003727449.1|	-	1.5e-61	208.3	4.3	2e-61	207.8	4.3	1.2	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
FtsA	PF14450.6	gi|298675699|ref|YP_003727449.1|	-	0.00021	21.7	0.3	0.004	17.5	0.3	2.4	1	1	0	1	1	1	1	Cell	division	protein	FtsA
MreB_Mbl	PF06723.13	gi|298675699|ref|YP_003727449.1|	-	0.0019	17.1	0.1	0.0044	15.9	0.1	1.7	1	0	0	1	1	1	1	MreB/Mbl	protein
Hydant_A_N	PF05378.13	gi|298675699|ref|YP_003727449.1|	-	0.026	14.2	0.2	0.069	12.9	0.2	1.7	1	0	0	1	1	1	0	Hydantoinase/oxoprolinase	N-terminal	region
Peptidase_M22	PF00814.25	gi|298675699|ref|YP_003727449.1|	-	0.028	14.1	0.0	1.8	8.2	0.0	2.4	2	0	0	2	2	2	0	Glycoprotease	family
Actin	PF00022.19	gi|298675699|ref|YP_003727449.1|	-	0.062	11.9	0.2	1.2	7.6	0.0	2.6	3	0	0	3	3	3	0	Actin
DUF4934	PF16288.5	gi|298675699|ref|YP_003727449.1|	-	0.068	13.1	0.0	0.14	12.0	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4934)
DUF2113	PF09886.9	gi|298675700|ref|YP_003727450.1|	-	1.4e-70	236.5	1.8	1.5e-70	236.3	1.8	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2113)
MCR_C	PF04609.12	gi|298675701|ref|YP_003727451.1|	-	1.3e-127	424.5	0.1	1.5e-127	424.3	0.1	1.0	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	C
CMD	PF02627.20	gi|298675702|ref|YP_003727452.1|	-	7.8e-13	48.3	0.0	1.2e-12	47.7	0.0	1.3	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
SPP	PF06550.11	gi|298675703|ref|YP_003727453.1|	-	4.2e-101	338.1	24.7	5e-101	337.9	24.7	1.0	1	0	0	1	1	1	1	Signal-peptide	peptidase,	presenilin	aspartyl	protease
Peptidase_A22B	PF04258.13	gi|298675703|ref|YP_003727453.1|	-	4.7e-09	36.2	11.0	9.7e-09	35.1	11.0	1.5	1	1	0	1	1	1	1	Signal	peptide	peptidase
Presenilin	PF01080.17	gi|298675703|ref|YP_003727453.1|	-	0.0081	15.0	19.5	0.0094	14.8	15.1	2.1	2	0	0	2	2	2	2	Presenilin
Baculo_PEP_C	PF04513.12	gi|298675704|ref|YP_003727454.1|	-	0.0015	18.6	1.9	0.0019	18.2	1.9	1.1	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF948	PF06103.11	gi|298675704|ref|YP_003727454.1|	-	0.0029	17.8	0.1	0.0055	16.9	0.1	1.5	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF948)
LPG_synthase_TM	PF03706.13	gi|298675704|ref|YP_003727454.1|	-	0.021	14.4	0.0	0.022	14.3	0.0	1.0	1	0	0	1	1	1	0	Lysylphosphatidylglycerol	synthase	TM	region
DUF3611	PF12263.8	gi|298675704|ref|YP_003727454.1|	-	0.026	14.4	0.2	0.028	14.3	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3611)
Tetraspanin	PF00335.20	gi|298675704|ref|YP_003727454.1|	-	0.047	13.4	0.1	0.058	13.1	0.1	1.2	1	0	0	1	1	1	0	Tetraspanin	family
DUF1772	PF08592.11	gi|298675704|ref|YP_003727454.1|	-	0.12	12.7	0.0	0.12	12.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1772)
TMEMspv1-c74-12	PF11044.8	gi|298675704|ref|YP_003727454.1|	-	0.62	10.1	2.9	18	5.4	0.4	2.3	2	0	0	2	2	2	0	Plectrovirus	spv1-c74	ORF	12	transmembrane	protein
XPG_I	PF00867.18	gi|298675706|ref|YP_003727456.1|	-	1.8e-27	95.5	0.0	4.2e-27	94.3	0.0	1.7	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.17	gi|298675706|ref|YP_003727456.1|	-	6.2e-23	81.2	0.0	1.3e-22	80.2	0.0	1.5	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc_N	PF02739.16	gi|298675706|ref|YP_003727456.1|	-	0.0017	18.3	0.0	0.0036	17.2	0.0	1.6	1	1	0	1	1	1	1	5'-3'	exonuclease,	N-terminal	resolvase-like	domain
5_3_exonuc	PF01367.20	gi|298675706|ref|YP_003727456.1|	-	0.0034	18.0	0.0	0.0078	16.8	0.0	1.7	1	0	0	1	1	1	1	5'-3'	exonuclease,	C-terminal	SAM	fold
RelB	PF04221.12	gi|298675706|ref|YP_003727456.1|	-	0.01	15.8	0.0	4.2	7.4	0.0	2.7	2	0	0	2	2	2	0	RelB	antitoxin
HHH_5	PF14520.6	gi|298675706|ref|YP_003727456.1|	-	0.018	15.6	0.0	0.043	14.4	0.0	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
eIF3_N	PF09440.10	gi|298675706|ref|YP_003727456.1|	-	0.046	14.2	1.1	0.092	13.2	0.1	2.0	2	0	0	2	2	2	0	eIF3	subunit	6	N	terminal	domain
iPGM_N	PF06415.13	gi|298675707|ref|YP_003727457.1|	-	9.4e-86	286.7	1.0	1.3e-85	286.2	1.0	1.2	1	0	0	1	1	1	1	BPG-independent	PGAM	N-terminus	(iPGM_N)
Metalloenzyme	PF01676.18	gi|298675707|ref|YP_003727457.1|	-	7.4e-81	271.2	0.2	8.6e-81	271.0	0.2	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Sulfatase	PF00884.23	gi|298675707|ref|YP_003727457.1|	-	0.00044	19.7	0.0	0.015	14.7	0.0	2.6	2	1	0	2	2	2	1	Sulfatase
Alk_phosphatase	PF00245.20	gi|298675707|ref|YP_003727457.1|	-	0.017	14.1	0.1	0.28	10.1	0.1	2.1	2	0	0	2	2	2	0	Alkaline	phosphatase
CBS	PF00571.28	gi|298675708|ref|YP_003727458.1|	-	1e-27	96.3	1.9	5.4e-14	52.4	0.2	2.4	2	0	0	2	2	2	2	CBS	domain
Peptidase_M50	PF02163.22	gi|298675708|ref|YP_003727458.1|	-	2.3e-15	56.5	9.5	1.6e-08	34.1	0.1	3.4	1	1	2	3	3	3	2	Peptidase	family	M50
Peptidase_M50B	PF13398.6	gi|298675708|ref|YP_003727458.1|	-	0.00017	21.3	5.3	0.00047	19.9	5.1	1.9	1	1	0	1	1	1	1	Peptidase	M50B-like
FA_desaturase	PF00487.24	gi|298675708|ref|YP_003727458.1|	-	0.084	12.7	3.6	2.5	7.9	0.1	2.2	2	0	0	2	2	2	0	Fatty	acid	desaturase
TraB	PF01963.17	gi|298675709|ref|YP_003727459.1|	-	5.1e-33	115.1	0.0	9.7e-33	114.2	0.0	1.4	1	0	0	1	1	1	1	TraB	family
FTR_C	PF02741.15	gi|298675710|ref|YP_003727460.1|	-	1.7e-65	219.6	1.5	2.7e-65	218.9	1.5	1.3	1	0	0	1	1	1	1	FTR,	proximal	lobe
FTR	PF01913.18	gi|298675710|ref|YP_003727460.1|	-	2.5e-63	212.3	0.2	5.5e-63	211.2	0.0	1.6	2	1	0	2	2	2	1	Formylmethanofuran-tetrahydromethanopterin	formyltransferase
E1-E2_ATPase	PF00122.20	gi|298675711|ref|YP_003727461.1|	-	6.7e-51	172.4	0.4	6.7e-51	172.4	0.4	2.0	2	0	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|298675711|ref|YP_003727461.1|	-	4.8e-45	154.4	0.0	7e-45	153.9	0.0	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|298675711|ref|YP_003727461.1|	-	1.3e-05	25.7	0.0	3.4e-05	24.3	0.0	1.7	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|298675711|ref|YP_003727461.1|	-	3e-05	23.9	0.8	0.0039	17.0	0.7	2.7	3	0	0	3	3	3	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|298675711|ref|YP_003727461.1|	-	0.012	15.7	0.0	0.026	14.6	0.0	1.5	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
WBS28	PF15164.6	gi|298675711|ref|YP_003727461.1|	-	0.045	13.0	1.7	0.16	11.3	0.9	2.0	2	0	0	2	2	2	0	Williams-Beuren	syndrome	chromosomal	region	28	protein	homologue
HhH-GPD	PF00730.25	gi|298675712|ref|YP_003727462.1|	-	1e-25	90.2	0.1	1.4e-25	89.9	0.1	1.1	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.23	gi|298675712|ref|YP_003727462.1|	-	3.3e-06	26.7	0.0	7.4e-05	22.4	0.0	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|298675712|ref|YP_003727462.1|	-	4.8e-06	27.1	0.0	0.032	14.8	0.0	2.5	2	1	0	2	2	2	2	Helix-hairpin-helix	domain
DUF4294	PF14127.6	gi|298675712|ref|YP_003727462.1|	-	0.00061	19.7	0.3	0.0011	19.0	0.3	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4294)
EndIII_4Fe-2S	PF10576.9	gi|298675712|ref|YP_003727462.1|	-	0.00062	20.0	3.2	0.001	19.4	3.2	1.4	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
DUF2400	PF09674.10	gi|298675712|ref|YP_003727462.1|	-	0.065	13.2	0.2	0.28	11.1	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2400)
DUF3349	PF11829.8	gi|298675712|ref|YP_003727462.1|	-	0.12	13.1	0.1	0.42	11.4	0.1	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3349)
HHH_2	PF12826.7	gi|298675712|ref|YP_003727462.1|	-	0.18	11.9	0.0	6.7	6.9	0.0	2.5	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
TPP_enzyme_C	PF02775.21	gi|298675713|ref|YP_003727463.1|	-	2.5e-26	92.3	0.1	3.4e-26	91.9	0.1	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|298675714|ref|YP_003727464.1|	-	1e-67	228.3	0.0	1.3e-67	227.9	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|298675714|ref|YP_003727464.1|	-	1.9e-30	105.2	0.1	3.9e-30	104.2	0.1	1.6	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|298675714|ref|YP_003727464.1|	-	1e-07	31.9	0.1	2.3e-07	30.7	0.1	1.5	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
Lantibiotic_a	PF14867.6	gi|298675714|ref|YP_003727464.1|	-	0.089	12.5	1.9	0.18	11.6	1.9	1.4	1	0	0	1	1	1	0	Lantibiotic	alpha
Fer4	PF00037.27	gi|298675715|ref|YP_003727465.1|	-	8.6e-15	53.9	13.0	5.9e-08	32.2	3.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675715|ref|YP_003727465.1|	-	2.4e-11	43.6	6.2	3.2e-11	43.2	6.2	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675715|ref|YP_003727465.1|	-	3.5e-10	39.9	18.9	3.1e-08	33.6	8.4	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298675715|ref|YP_003727465.1|	-	4.6e-10	39.1	11.1	1.8e-05	24.6	2.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298675715|ref|YP_003727465.1|	-	1.3e-08	35.2	10.5	1.7e-08	34.9	9.7	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675715|ref|YP_003727465.1|	-	1.5e-08	35.4	7.6	0.00083	20.3	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|298675715|ref|YP_003727465.1|	-	6.9e-08	32.1	8.5	0.00042	20.2	1.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298675715|ref|YP_003727465.1|	-	2.1e-06	27.8	22.1	0.00046	20.3	12.5	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298675715|ref|YP_003727465.1|	-	4.2e-05	23.7	16.2	0.0071	16.8	1.6	2.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298675715|ref|YP_003727465.1|	-	7.5e-05	23.2	9.0	0.028	14.9	1.3	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298675715|ref|YP_003727465.1|	-	0.00087	19.7	12.8	0.068	13.6	3.6	2.2	1	1	2	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298675715|ref|YP_003727465.1|	-	0.013	16.2	10.8	0.19	12.5	3.6	2.7	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|298675715|ref|YP_003727465.1|	-	0.018	15.6	12.6	0.14	12.7	1.5	2.5	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|298675715|ref|YP_003727465.1|	-	0.15	13.0	12.2	0.23	12.3	1.9	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298675715|ref|YP_003727465.1|	-	0.31	12.1	16.7	1.2	10.3	2.3	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
POR	PF01558.18	gi|298675716|ref|YP_003727466.1|	-	2.3e-42	145.0	0.1	2.7e-42	144.8	0.1	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
AAA	PF00004.29	gi|298675717|ref|YP_003727467.1|	-	1.6e-43	148.3	0.0	3.2e-43	147.3	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|298675717|ref|YP_003727467.1|	-	7.4e-07	29.0	0.0	1.9e-06	27.7	0.0	1.6	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_lid_3	PF17862.1	gi|298675717|ref|YP_003727467.1|	-	5.1e-06	26.2	0.0	1.1e-05	25.1	0.0	1.6	1	0	0	1	1	1	1	AAA+	lid	domain
AAA_22	PF13401.6	gi|298675717|ref|YP_003727467.1|	-	6.9e-06	26.4	0.2	0.0031	17.8	0.0	3.1	2	1	1	3	3	3	1	AAA	domain
AAA_16	PF13191.6	gi|298675717|ref|YP_003727467.1|	-	9.9e-06	26.0	0.0	0.0011	19.3	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_2	PF07724.14	gi|298675717|ref|YP_003727467.1|	-	1e-05	25.7	0.0	2.5e-05	24.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
TIP49	PF06068.13	gi|298675717|ref|YP_003727467.1|	-	2.6e-05	23.6	0.0	5e-05	22.7	0.0	1.4	1	0	0	1	1	1	1	TIP49	P-loop	domain
AAA_14	PF13173.6	gi|298675717|ref|YP_003727467.1|	-	3.9e-05	23.7	0.0	0.00027	21.0	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.22	gi|298675717|ref|YP_003727467.1|	-	4.8e-05	23.7	0.0	0.013	15.9	0.0	2.7	2	1	0	2	2	2	1	RNA	helicase
AAA_18	PF13238.6	gi|298675717|ref|YP_003727467.1|	-	0.00012	22.7	0.0	0.00038	21.0	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.21	gi|298675717|ref|YP_003727467.1|	-	0.00027	20.4	0.2	0.0013	18.1	0.1	2.0	1	1	1	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.6	gi|298675717|ref|YP_003727467.1|	-	0.00044	20.4	0.0	0.00074	19.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.14	gi|298675717|ref|YP_003727467.1|	-	0.0013	18.8	0.1	0.0069	16.4	0.1	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.17	gi|298675717|ref|YP_003727467.1|	-	0.0018	18.0	0.0	0.0046	16.7	0.0	1.7	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_28	PF13521.6	gi|298675717|ref|YP_003727467.1|	-	0.0055	17.0	0.0	0.01	16.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|298675717|ref|YP_003727467.1|	-	0.012	14.8	0.0	0.024	13.9	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_7	PF12775.7	gi|298675717|ref|YP_003727467.1|	-	0.015	14.8	0.0	0.043	13.3	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
NACHT	PF05729.12	gi|298675717|ref|YP_003727467.1|	-	0.016	15.1	0.0	0.52	10.2	0.0	2.2	1	1	1	2	2	2	0	NACHT	domain
DUF815	PF05673.13	gi|298675717|ref|YP_003727467.1|	-	0.027	13.6	0.0	0.048	12.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA_17	PF13207.6	gi|298675717|ref|YP_003727467.1|	-	0.03	14.7	0.0	0.073	13.5	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.26	gi|298675717|ref|YP_003727467.1|	-	0.031	14.0	0.0	0.14	11.8	0.0	2.0	1	1	0	1	1	1	0	Sigma-54	interaction	domain
ATPase	PF06745.13	gi|298675717|ref|YP_003727467.1|	-	0.04	13.3	0.1	1.5	8.1	0.0	2.4	2	0	0	2	2	2	0	KaiC
PhoH	PF02562.16	gi|298675717|ref|YP_003727467.1|	-	0.044	13.2	0.0	0.16	11.4	0.0	1.8	2	0	0	2	2	2	0	PhoH-like	protein
Cytidylate_kin2	PF13189.6	gi|298675717|ref|YP_003727467.1|	-	0.046	13.8	0.0	0.2	11.8	0.0	2.0	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
CPT	PF07931.12	gi|298675717|ref|YP_003727467.1|	-	0.052	13.4	0.0	0.084	12.7	0.0	1.4	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
AAA_24	PF13479.6	gi|298675717|ref|YP_003727467.1|	-	0.054	13.2	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|298675717|ref|YP_003727467.1|	-	0.09	13.3	0.0	0.21	12.1	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
AAA_3	PF07726.11	gi|298675717|ref|YP_003727467.1|	-	0.09	12.6	0.0	0.19	11.6	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ResIII	PF04851.15	gi|298675717|ref|YP_003727467.1|	-	0.1	12.6	0.0	0.21	11.6	0.0	1.6	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
DUF2075	PF09848.9	gi|298675717|ref|YP_003727467.1|	-	0.13	11.5	0.1	0.65	9.2	0.1	2.1	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_25	PF13481.6	gi|298675717|ref|YP_003727467.1|	-	0.17	11.5	0.3	0.69	9.5	0.2	1.9	1	1	1	2	2	2	0	AAA	domain
AAA_17	PF13207.6	gi|298675718|ref|YP_003727468.1|	-	9.4e-17	61.7	0.8	2.2e-16	60.5	0.8	1.6	1	0	0	1	1	1	1	AAA	domain
RNA_binding	PF01877.17	gi|298675718|ref|YP_003727468.1|	-	1.7e-16	60.6	0.1	5.1e-16	59.0	0.1	1.8	1	0	0	1	1	1	1	RNA	binding
AAA_18	PF13238.6	gi|298675718|ref|YP_003727468.1|	-	6.9e-10	39.6	0.4	3e-09	37.5	0.2	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|298675718|ref|YP_003727468.1|	-	2e-05	24.8	0.0	4e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
CoaE	PF01121.20	gi|298675718|ref|YP_003727468.1|	-	0.0042	16.8	0.3	0.7	9.5	0.0	2.9	3	0	0	3	3	3	1	Dephospho-CoA	kinase
ADK	PF00406.22	gi|298675718|ref|YP_003727468.1|	-	0.015	15.4	0.3	0.033	14.3	0.3	1.9	1	1	0	1	1	1	0	Adenylate	kinase
AP_endonuc_2	PF01261.24	gi|298675719|ref|YP_003727469.1|	-	2.7e-33	115.2	0.0	3.2e-33	115.0	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
DUF87	PF01935.17	gi|298675720|ref|YP_003727470.1|	-	1.8e-13	51.1	0.0	1.2e-12	48.4	0.0	2.1	1	1	0	1	1	1	1	Helicase	HerA,	central	domain
DUF853	PF05872.12	gi|298675720|ref|YP_003727470.1|	-	1.1e-12	47.4	0.0	2.2e-08	33.2	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA_10	PF12846.7	gi|298675720|ref|YP_003727470.1|	-	4.7e-06	25.8	0.0	0.063	12.2	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
AAA_16	PF13191.6	gi|298675720|ref|YP_003727470.1|	-	6.4e-05	23.4	0.0	0.034	14.5	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
TrwB_AAD_bind	PF10412.9	gi|298675720|ref|YP_003727470.1|	-	6.6e-05	22.0	0.0	0.00021	20.3	0.0	1.7	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA	PF00004.29	gi|298675720|ref|YP_003727470.1|	-	0.00012	22.5	0.5	0.98	9.9	0.0	2.7	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|298675720|ref|YP_003727470.1|	-	0.00018	21.8	0.0	0.007	16.7	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
ResIII	PF04851.15	gi|298675720|ref|YP_003727470.1|	-	0.00032	20.7	0.1	0.089	12.8	0.1	2.5	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|298675720|ref|YP_003727470.1|	-	0.00075	19.3	0.0	0.72	9.6	0.0	2.3	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
FtsK_SpoIIIE	PF01580.18	gi|298675720|ref|YP_003727470.1|	-	0.00087	18.7	0.0	0.14	11.5	0.0	2.4	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
RNA_helicase	PF00910.22	gi|298675720|ref|YP_003727470.1|	-	0.0012	19.3	0.1	0.0023	18.3	0.1	1.5	1	0	0	1	1	1	1	RNA	helicase
AAA_7	PF12775.7	gi|298675720|ref|YP_003727470.1|	-	0.005	16.4	0.0	0.011	15.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
PriA_3primeBD	PF17764.1	gi|298675720|ref|YP_003727470.1|	-	0.025	14.5	0.0	7.1	6.6	0.0	2.6	2	0	0	2	2	2	0	3′	DNA-binding	domain	(3′BD)
T2SSE	PF00437.20	gi|298675720|ref|YP_003727470.1|	-	0.098	11.7	0.0	0.19	10.8	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_33	PF13671.6	gi|298675720|ref|YP_003727470.1|	-	0.1	12.8	0.0	0.26	11.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
NurA	PF09376.10	gi|298675721|ref|YP_003727471.1|	-	1.2e-08	34.9	0.0	1.7e-08	34.5	0.0	1.3	1	0	0	1	1	1	1	NurA	domain
Borrelia_orfD	PF02999.14	gi|298675721|ref|YP_003727471.1|	-	0.48	10.8	4.4	1.4	9.3	0.2	2.9	3	1	0	3	3	3	0	Borrelia	orf-D	family
SSF	PF00474.17	gi|298675722|ref|YP_003727472.1|	-	4.2e-37	128.0	35.7	4.2e-37	128.0	35.7	2.0	3	0	0	3	3	3	1	Sodium:solute	symporter	family
Nramp	PF01566.18	gi|298675722|ref|YP_003727472.1|	-	0.1	11.5	36.1	0.018	14.1	16.3	3.2	2	1	0	3	3	3	0	Natural	resistance-associated	macrophage	protein
Alginate_exp	PF13372.6	gi|298675722|ref|YP_003727472.1|	-	0.12	11.1	0.0	0.18	10.5	0.0	1.1	1	0	0	1	1	1	0	Alginate	export
DUF2976	PF11190.8	gi|298675722|ref|YP_003727472.1|	-	0.39	10.5	0.0	0.39	10.5	0.0	4.8	5	2	2	7	7	7	0	Protein	of	unknown	function	(DUF2976)
DUF4969	PF16339.5	gi|298675723|ref|YP_003727473.1|	-	0.06	13.7	0.1	0.14	12.5	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4969)
OrfB_Zn_ribbon	PF07282.11	gi|298675724|ref|YP_003727474.1|	-	3.6e-25	87.7	3.0	1.7e-24	85.5	1.1	2.7	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675724|ref|YP_003727474.1|	-	7.4e-11	42.3	1.7	2e-10	40.9	1.7	1.7	1	0	0	1	1	1	1	Probable	transposase
UPF0547	PF10571.9	gi|298675724|ref|YP_003727474.1|	-	0.033	14.2	1.2	0.89	9.7	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
HypA	PF01155.19	gi|298675724|ref|YP_003727474.1|	-	0.052	13.6	0.1	0.1	12.6	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DUF2387	PF09526.10	gi|298675724|ref|YP_003727474.1|	-	0.41	10.8	6.0	7.8	6.7	0.2	3.4	2	1	1	3	3	3	0	Probable	metal-binding	protein	(DUF2387)
zinc_ribbon_2	PF13240.6	gi|298675724|ref|YP_003727474.1|	-	0.92	9.3	4.0	7.2	6.5	0.6	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Tnp_zf-ribbon_2	PF13842.6	gi|298675724|ref|YP_003727474.1|	-	1.1	10.1	6.9	2.6	8.9	6.9	1.6	1	0	0	1	1	1	0	DDE_Tnp_1-like	zinc-ribbon
Zn_Tnp_IS1595	PF12760.7	gi|298675724|ref|YP_003727474.1|	-	1.1	9.2	4.5	2.5	8.1	4.5	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|298675724|ref|YP_003727474.1|	-	2.1	8.1	5.9	8	6.2	5.9	2.0	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Lactamase_B_2	PF12706.7	gi|298675725|ref|YP_003727475.1|	-	3.1e-26	92.1	0.3	4.1e-26	91.7	0.3	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|298675725|ref|YP_003727475.1|	-	5.1e-20	72.3	0.4	6.7e-20	71.9	0.4	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.6	gi|298675725|ref|YP_003727475.1|	-	0.089	12.7	1.1	0.29	11.0	1.1	1.8	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
AAA	PF00004.29	gi|298675726|ref|YP_003727476.1|	-	1.9e-37	128.6	0.1	1.8e-36	125.5	0.0	2.4	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|298675726|ref|YP_003727476.1|	-	2.8e-09	36.6	0.2	9.3e-09	35.0	0.2	1.9	1	0	0	1	1	1	1	AAA+	lid	domain
AAA_5	PF07728.14	gi|298675726|ref|YP_003727476.1|	-	5.6e-08	32.9	0.3	1.2e-06	28.6	0.1	2.9	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|298675726|ref|YP_003727476.1|	-	1.2e-05	25.8	0.1	0.0036	17.7	0.1	2.6	1	1	1	2	2	2	1	AAA	ATPase	domain
DUF815	PF05673.13	gi|298675726|ref|YP_003727476.1|	-	3.8e-05	23.0	0.1	8e-05	21.9	0.1	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_22	PF13401.6	gi|298675726|ref|YP_003727476.1|	-	0.00029	21.1	0.7	0.052	13.8	0.0	2.9	2	1	1	3	3	2	1	AAA	domain
AAA_18	PF13238.6	gi|298675726|ref|YP_003727476.1|	-	0.0004	20.9	0.1	0.0021	18.6	0.0	2.3	3	0	0	3	3	2	1	AAA	domain
AAA_33	PF13671.6	gi|298675726|ref|YP_003727476.1|	-	0.003	17.7	0.1	0.01	16.0	0.0	1.8	2	1	0	2	2	1	1	AAA	domain
Bac_DnaA	PF00308.18	gi|298675726|ref|YP_003727476.1|	-	0.0037	17.1	0.5	0.0067	16.3	0.0	1.7	2	0	0	2	2	1	1	Bacterial	dnaA	protein
RuvB_N	PF05496.12	gi|298675726|ref|YP_003727476.1|	-	0.0043	16.8	0.0	0.01	15.6	0.0	1.7	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_28	PF13521.6	gi|298675726|ref|YP_003727476.1|	-	0.006	16.8	0.0	0.021	15.1	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
TIP49	PF06068.13	gi|298675726|ref|YP_003727476.1|	-	0.0078	15.5	0.0	0.023	13.9	0.0	1.9	2	0	0	2	2	2	1	TIP49	P-loop	domain
AAA_2	PF07724.14	gi|298675726|ref|YP_003727476.1|	-	0.0094	16.1	1.8	0.078	13.1	0.0	3.0	3	1	0	3	3	3	1	AAA	domain	(Cdc48	subfamily)
IstB_IS21	PF01695.17	gi|298675726|ref|YP_003727476.1|	-	0.013	15.3	0.0	0.029	14.1	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_17	PF13207.6	gi|298675726|ref|YP_003727476.1|	-	0.016	15.6	1.3	1.1	9.7	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
AAA_25	PF13481.6	gi|298675726|ref|YP_003727476.1|	-	0.021	14.4	0.6	1.4	8.5	0.1	2.7	1	1	1	2	2	2	0	AAA	domain
SKI	PF01202.22	gi|298675726|ref|YP_003727476.1|	-	0.023	14.8	0.0	0.083	13.0	0.0	2.0	2	0	0	2	2	1	0	Shikimate	kinase
Mg_chelatase	PF01078.21	gi|298675726|ref|YP_003727476.1|	-	0.04	13.3	0.2	0.094	12.1	0.2	1.8	1	1	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.26	gi|298675726|ref|YP_003727476.1|	-	0.041	13.6	0.0	0.1	12.3	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_19	PF13245.6	gi|298675726|ref|YP_003727476.1|	-	0.042	14.2	0.6	0.19	12.1	0.3	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_3	PF07726.11	gi|298675726|ref|YP_003727476.1|	-	0.063	13.1	0.1	0.24	11.3	0.0	2.2	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ResIII	PF04851.15	gi|298675726|ref|YP_003727476.1|	-	0.065	13.2	0.1	0.17	11.9	0.0	1.8	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_7	PF12775.7	gi|298675726|ref|YP_003727476.1|	-	0.091	12.3	0.0	0.23	11.0	0.0	1.7	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
NACHT	PF05729.12	gi|298675726|ref|YP_003727476.1|	-	0.092	12.7	0.1	10	6.0	0.0	2.5	2	0	0	2	2	2	0	NACHT	domain
Sigma54_activ_2	PF14532.6	gi|298675726|ref|YP_003727476.1|	-	0.095	12.8	0.0	0.22	11.7	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
CPT	PF07931.12	gi|298675726|ref|YP_003727476.1|	-	0.1	12.5	0.0	0.18	11.6	0.0	1.5	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
DUF1922	PF09082.10	gi|298675727|ref|YP_003727477.1|	-	0.00021	21.5	2.1	0.00032	20.9	2.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1922)
Zn-ribbon_8	PF09723.10	gi|298675727|ref|YP_003727477.1|	-	0.017	15.2	0.3	0.017	15.2	0.3	1.8	2	0	0	2	2	2	0	Zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|298675727|ref|YP_003727477.1|	-	0.028	14.3	1.1	0.058	13.3	1.1	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_10	PF10058.9	gi|298675727|ref|YP_003727477.1|	-	0.032	14.0	2.3	0.097	12.4	2.4	1.8	2	0	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Ribosomal_S27e	PF01667.17	gi|298675727|ref|YP_003727477.1|	-	0.15	11.8	2.5	0.28	10.9	2.5	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S27
DNA_RNApol_7kD	PF03604.13	gi|298675727|ref|YP_003727477.1|	-	0.27	11.0	2.9	0.72	9.6	2.9	1.7	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-HYPF	PF07503.12	gi|298675727|ref|YP_003727477.1|	-	0.67	9.8	3.6	19	5.2	0.1	2.8	3	0	0	3	3	3	0	HypF	finger
Acetyltransf_1	PF00583.25	gi|298675728|ref|YP_003727478.1|	-	1e-16	61.2	0.1	1.2e-16	61.0	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|298675728|ref|YP_003727478.1|	-	4.6e-12	46.2	0.6	6.3e-12	45.8	0.6	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|298675728|ref|YP_003727478.1|	-	2e-11	43.9	0.1	2.4e-11	43.6	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|298675728|ref|YP_003727478.1|	-	0.00097	19.3	0.7	0.00097	19.3	0.7	1.5	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|298675728|ref|YP_003727478.1|	-	0.0012	18.9	0.0	0.014	15.5	0.0	2.1	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Prenyltransf	PF01255.19	gi|298675729|ref|YP_003727479.1|	-	6.3e-29	101.1	0.0	7.8e-27	94.3	0.0	2.0	1	1	1	2	2	2	2	Putative	undecaprenyl	diphosphate	synthase
MMR_HSR1_C	PF08438.10	gi|298675730|ref|YP_003727480.1|	-	5.8e-33	113.8	0.3	1.3e-32	112.7	0.2	1.7	2	0	0	2	2	2	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.23	gi|298675730|ref|YP_003727480.1|	-	2.3e-18	66.3	0.0	1.5e-17	63.7	0.0	2.2	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|298675730|ref|YP_003727480.1|	-	5.2e-14	52.0	0.0	1.1e-13	51.0	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|298675730|ref|YP_003727480.1|	-	4.5e-10	39.3	1.2	6.7e-07	29.0	0.0	2.7	3	0	0	3	3	3	2	Ferrous	iron	transport	protein	B
MMR_HSR1_Xtn	PF16897.5	gi|298675730|ref|YP_003727480.1|	-	0.005	16.8	0.3	0.012	15.6	0.3	1.6	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
ATP_bind_1	PF03029.17	gi|298675730|ref|YP_003727480.1|	-	0.022	14.5	0.4	0.39	10.5	0.1	2.2	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
NOG1	PF06858.14	gi|298675730|ref|YP_003727480.1|	-	0.077	12.8	0.3	1.2	8.9	0.1	2.4	2	0	0	2	2	2	0	Nucleolar	GTP-binding	protein	1	(NOG1)
FAD_binding_4	PF01565.23	gi|298675732|ref|YP_003727482.1|	-	4.6e-38	130.1	0.2	2.3e-37	127.8	0.1	2.0	2	0	0	2	2	2	1	FAD	binding	domain
CCG	PF02754.16	gi|298675732|ref|YP_003727482.1|	-	2.6e-31	107.7	1.8	8.8e-16	57.9	0.3	2.7	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_17	PF13534.6	gi|298675732|ref|YP_003727482.1|	-	4.3e-09	36.8	6.9	1.6e-08	35.0	6.9	2.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298675732|ref|YP_003727482.1|	-	3.1e-06	27.5	6.2	8e-06	26.2	6.2	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675732|ref|YP_003727482.1|	-	0.00074	19.6	2.3	0.00074	19.6	2.3	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675732|ref|YP_003727482.1|	-	0.0014	19.2	5.4	0.0014	19.2	5.4	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675732|ref|YP_003727482.1|	-	0.42	10.7	10.4	0.91	9.7	8.4	2.6	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Cpn60_TCP1	PF00118.24	gi|298675733|ref|YP_003727483.1|	-	4.8e-182	606.0	21.7	5.5e-182	605.8	21.7	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
TrkA_C	PF02080.21	gi|298675734|ref|YP_003727484.1|	-	6.7e-14	51.5	0.1	1.1e-13	50.8	0.1	1.4	1	0	0	1	1	1	1	TrkA-C	domain
Castor_Poll_mid	PF06241.12	gi|298675734|ref|YP_003727484.1|	-	7.3e-05	22.7	0.0	0.00013	21.9	0.0	1.4	1	0	0	1	1	1	1	Castor	and	Pollux,	part	of	voltage-gated	ion	channel
Halogen_Hydrol	PF10112.9	gi|298675734|ref|YP_003727484.1|	-	0.21	11.6	2.6	1.2	9.1	0.3	2.1	2	0	0	2	2	2	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
DUF2207	PF09972.9	gi|298675734|ref|YP_003727484.1|	-	0.69	8.6	2.8	0.88	8.3	2.8	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
bPH_1	PF08000.11	gi|298675735|ref|YP_003727485.1|	-	5e-06	26.6	0.1	1e-05	25.6	0.1	1.5	1	0	0	1	1	1	1	Bacterial	PH	domain
bPH_3	PF14470.6	gi|298675735|ref|YP_003727485.1|	-	0.00022	21.6	0.4	0.0017	18.7	0.0	2.3	2	1	1	3	3	3	1	Bacterial	PH	domain
Gram_pos_anchor	PF00746.21	gi|298675735|ref|YP_003727485.1|	-	0.0061	16.5	0.8	0.43	10.6	0.0	2.3	2	0	0	2	2	2	1	LPXTG	cell	wall	anchor	motif
DUF3098	PF11297.8	gi|298675735|ref|YP_003727485.1|	-	0.0078	15.8	4.1	0.3	10.7	0.1	2.3	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF3098)
Neurensin	PF14927.6	gi|298675735|ref|YP_003727485.1|	-	1.1	9.0	3.7	3.9	7.2	0.2	2.1	1	1	1	2	2	2	0	Neurensin
BioY	PF02632.14	gi|298675736|ref|YP_003727486.1|	-	5.6e-40	136.5	20.3	9.4e-40	135.8	20.3	1.3	1	0	0	1	1	1	1	BioY	family
ECF-ribofla_trS	PF07155.12	gi|298675736|ref|YP_003727486.1|	-	0.00069	19.7	24.6	0.011	15.8	24.6	2.8	1	1	0	1	1	1	1	ECF-type	riboflavin	transporter,	S	component
Pox_A9	PF04835.12	gi|298675736|ref|YP_003727486.1|	-	0.54	10.4	5.4	1	9.5	0.2	2.6	2	0	0	2	2	2	0	A9	protein	conserved	region
ABC_tran	PF00005.27	gi|298675737|ref|YP_003727487.1|	-	5.8e-32	111.1	0.1	8.7e-32	110.5	0.1	1.3	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|298675737|ref|YP_003727487.1|	-	6.3e-13	48.7	1.0	1.1e-12	47.8	1.0	1.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|298675737|ref|YP_003727487.1|	-	2.9e-11	43.7	0.0	5.2e-07	29.8	0.0	2.3	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|298675737|ref|YP_003727487.1|	-	2.3e-05	24.3	0.0	3.4e-05	23.7	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|298675737|ref|YP_003727487.1|	-	3.7e-05	23.4	0.0	7.4e-05	22.4	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|298675737|ref|YP_003727487.1|	-	6.4e-05	23.4	0.0	0.0001	22.8	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_23	PF13476.6	gi|298675737|ref|YP_003727487.1|	-	0.00036	21.1	0.1	0.0006	20.4	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.15	gi|298675737|ref|YP_003727487.1|	-	0.00061	19.7	0.3	0.54	10.1	0.0	2.2	2	0	0	2	2	2	2	NTPase
AAA_22	PF13401.6	gi|298675737|ref|YP_003727487.1|	-	0.001	19.4	0.1	0.0058	16.9	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|298675737|ref|YP_003727487.1|	-	0.0018	18.3	0.2	0.78	9.8	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
TniB	PF05621.11	gi|298675737|ref|YP_003727487.1|	-	0.0019	17.7	0.4	0.16	11.4	0.1	2.2	2	0	0	2	2	2	1	Bacterial	TniB	protein
AAA_5	PF07728.14	gi|298675737|ref|YP_003727487.1|	-	0.0022	18.0	0.0	0.026	14.5	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
RNA_helicase	PF00910.22	gi|298675737|ref|YP_003727487.1|	-	0.0026	18.1	0.6	0.012	16.0	0.0	2.1	2	0	0	2	2	2	1	RNA	helicase
ATPase	PF06745.13	gi|298675737|ref|YP_003727487.1|	-	0.0035	16.7	0.4	1.9	7.7	0.0	2.2	2	0	0	2	2	2	2	KaiC
AAA	PF00004.29	gi|298675737|ref|YP_003727487.1|	-	0.0058	17.0	0.2	4.1	7.8	0.0	2.2	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.15	gi|298675737|ref|YP_003727487.1|	-	0.0069	16.3	0.7	0.03	14.2	0.7	2.0	1	1	0	1	1	1	1	Rad17	P-loop	domain
RsgA_GTPase	PF03193.16	gi|298675737|ref|YP_003727487.1|	-	0.0076	16.2	0.2	0.016	15.1	0.1	1.6	2	0	0	2	2	2	1	RsgA	GTPase
NB-ARC	PF00931.22	gi|298675737|ref|YP_003727487.1|	-	0.01	15.0	0.1	0.087	12.0	0.1	2.1	2	0	0	2	2	2	0	NB-ARC	domain
NACHT	PF05729.12	gi|298675737|ref|YP_003727487.1|	-	0.01	15.7	0.0	0.019	14.9	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
KdpD	PF02702.17	gi|298675737|ref|YP_003727487.1|	-	0.017	14.6	0.1	0.023	14.2	0.1	1.2	1	0	0	1	1	1	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
AAA_25	PF13481.6	gi|298675737|ref|YP_003727487.1|	-	0.029	13.9	0.0	0.24	11.0	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.21	gi|298675737|ref|YP_003727487.1|	-	0.045	13.1	0.0	0.074	12.4	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
PduV-EutP	PF10662.9	gi|298675737|ref|YP_003727487.1|	-	0.046	13.5	0.2	0.29	10.9	0.0	2.1	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_30	PF13604.6	gi|298675737|ref|YP_003727487.1|	-	0.052	13.3	0.0	0.25	11.1	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
Acid_phosphat_B	PF03767.14	gi|298675737|ref|YP_003727487.1|	-	0.073	12.7	0.0	0.13	11.9	0.0	1.4	1	0	0	1	1	1	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
MeaB	PF03308.16	gi|298675737|ref|YP_003727487.1|	-	0.078	12.0	0.0	0.12	11.3	0.0	1.4	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_7	PF12775.7	gi|298675737|ref|YP_003727487.1|	-	0.088	12.3	0.1	0.15	11.5	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
DUF4823	PF16105.5	gi|298675737|ref|YP_003727487.1|	-	0.11	12.4	0.0	0.19	11.6	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4823)
Zeta_toxin	PF06414.12	gi|298675737|ref|YP_003727487.1|	-	0.15	11.4	0.0	0.28	10.4	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
DUF910	PF06014.11	gi|298675737|ref|YP_003727487.1|	-	0.16	12.0	1.2	0.43	10.6	0.6	2.0	2	0	0	2	2	1	0	Bacterial	protein	of	unknown	function	(DUF910)
ABC_tran	PF00005.27	gi|298675738|ref|YP_003727488.1|	-	4.8e-31	108.1	0.0	6e-30	104.6	0.0	2.0	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|298675738|ref|YP_003727488.1|	-	1e-05	25.5	0.2	0.17	11.7	0.7	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|298675738|ref|YP_003727488.1|	-	7.1e-05	22.5	0.0	0.00014	21.5	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.6	gi|298675738|ref|YP_003727488.1|	-	0.00055	20.0	0.0	0.0074	16.3	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
SMC_N	PF02463.19	gi|298675738|ref|YP_003727488.1|	-	0.0032	16.9	0.3	0.82	9.1	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
CoaE	PF01121.20	gi|298675738|ref|YP_003727488.1|	-	0.0042	16.8	0.0	0.0067	16.1	0.0	1.4	1	0	0	1	1	1	1	Dephospho-CoA	kinase
MeaB	PF03308.16	gi|298675738|ref|YP_003727488.1|	-	0.0042	16.1	0.0	0.0065	15.5	0.0	1.3	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_22	PF13401.6	gi|298675738|ref|YP_003727488.1|	-	0.012	15.8	0.0	0.06	13.6	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_18	PF13238.6	gi|298675738|ref|YP_003727488.1|	-	0.035	14.7	0.0	0.11	13.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
Spore_IV_A	PF09547.10	gi|298675738|ref|YP_003727488.1|	-	0.072	12.0	0.1	0.15	11.0	0.1	1.4	2	0	0	2	2	2	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
ATPase_2	PF01637.18	gi|298675738|ref|YP_003727488.1|	-	0.079	12.9	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_16	PF13191.6	gi|298675738|ref|YP_003727488.1|	-	0.083	13.3	0.0	0.12	12.7	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
NTPase_1	PF03266.15	gi|298675738|ref|YP_003727488.1|	-	0.12	12.3	0.1	0.37	10.7	0.1	1.8	2	0	0	2	2	2	0	NTPase
AAA_23	PF13476.6	gi|298675738|ref|YP_003727488.1|	-	0.13	12.8	2.5	0.24	11.9	2.2	1.5	1	1	0	1	1	1	0	AAA	domain
dNK	PF01712.19	gi|298675738|ref|YP_003727488.1|	-	0.13	12.1	0.0	0.24	11.2	0.0	1.6	1	0	0	1	1	1	0	Deoxynucleoside	kinase
HTH_5	PF01022.20	gi|298675739|ref|YP_003727489.1|	-	5.9e-13	48.5	1.9	1.1e-12	47.6	1.9	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|298675739|ref|YP_003727489.1|	-	0.00073	19.5	0.1	0.0012	18.9	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_1	PF00126.27	gi|298675739|ref|YP_003727489.1|	-	0.1	12.6	0.1	0.24	11.4	0.1	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
ArsP_1	PF03773.13	gi|298675740|ref|YP_003727490.1|	-	6.2e-49	166.7	10.4	8.3e-49	166.3	10.4	1.1	1	0	0	1	1	1	1	Predicted	permease
PspC	PF04024.12	gi|298675741|ref|YP_003727491.1|	-	1.3e-23	82.5	0.4	1.3e-23	82.5	0.4	2.4	2	1	0	2	2	1	1	PspC	domain
DUF2370	PF10176.9	gi|298675741|ref|YP_003727491.1|	-	0.00016	21.4	0.0	0.00023	20.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2370)
MFS_1	PF07690.16	gi|298675741|ref|YP_003727491.1|	-	0.00096	18.2	0.6	0.0015	17.5	0.6	1.3	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
MCU	PF04678.13	gi|298675741|ref|YP_003727491.1|	-	0.031	14.4	0.0	0.038	14.1	0.0	1.1	1	0	0	1	1	1	0	Mitochondrial	calcium	uniporter
DUF3899	PF13038.6	gi|298675741|ref|YP_003727491.1|	-	0.032	14.7	0.0	0.032	14.7	0.0	2.4	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF3899)
DUF2371	PF10177.9	gi|298675741|ref|YP_003727491.1|	-	0.06	13.5	0.0	0.097	12.8	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
UPF0239	PF06783.11	gi|298675741|ref|YP_003727491.1|	-	0.08	13.1	0.0	0.15	12.3	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0239)
DUF4834	PF16118.5	gi|298675741|ref|YP_003727491.1|	-	0.15	13.0	0.0	0.15	13.0	0.0	2.2	2	1	1	3	3	2	0	Domain	of	unknown	function	(DUF4834)
Tir_receptor_N	PF07490.11	gi|298675741|ref|YP_003727491.1|	-	0.21	11.4	0.0	0.28	11.0	0.0	1.1	1	0	0	1	1	1	0	Translocated	intimin	receptor	(Tir)	N-terminus
DUF2207	PF09972.9	gi|298675741|ref|YP_003727491.1|	-	0.3	9.8	5.2	0.094	11.5	0.4	1.9	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2207)
DUF2116	PF09889.9	gi|298675741|ref|YP_003727491.1|	-	0.4	10.7	0.0	0.4	10.7	0.0	2.7	3	1	0	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Orf78	PF06024.12	gi|298675741|ref|YP_003727491.1|	-	2.6	8.4	6.7	0.35	11.2	0.3	2.4	2	1	1	3	3	3	0	Orf78	(ac78)
DUF123	PF01986.16	gi|298675742|ref|YP_003727492.1|	-	5.5e-31	106.9	0.0	6.9e-31	106.6	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
Multi_Drug_Res	PF00893.19	gi|298675743|ref|YP_003727493.1|	-	2e-28	98.9	7.8	2.6e-28	98.5	7.8	1.1	1	0	0	1	1	1	1	Small	Multidrug	Resistance	protein
EamA	PF00892.20	gi|298675743|ref|YP_003727493.1|	-	6.3e-05	23.2	11.2	9.3e-05	22.6	11.2	1.3	1	1	0	1	1	1	1	EamA-like	transporter	family
DUF4044	PF13253.6	gi|298675743|ref|YP_003727493.1|	-	0.18	11.4	0.3	0.18	11.4	0.3	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF4044)
UPF0047	PF01894.17	gi|298675744|ref|YP_003727494.1|	-	1.1e-40	138.3	0.0	1.3e-40	138.2	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
AP_endonuc_2	PF01261.24	gi|298675745|ref|YP_003727495.1|	-	0.00012	21.5	0.0	0.0002	20.9	0.0	1.4	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
DUF1367	PF07105.11	gi|298675745|ref|YP_003727495.1|	-	0.033	13.9	0.1	0.11	12.1	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1367)
Response_reg	PF00072.24	gi|298675746|ref|YP_003727496.1|	-	1.2e-26	93.1	0.4	1.3e-26	92.9	0.4	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Baculo_11_kDa	PF06143.11	gi|298675747|ref|YP_003727497.1|	-	0.016	14.8	0.2	0.031	13.8	0.2	1.5	1	0	0	1	1	1	0	Baculovirus	11	kDa	family
ODV-E18	PF10717.9	gi|298675747|ref|YP_003727497.1|	-	0.032	14.1	2.8	0.075	12.9	2.8	1.6	1	0	0	1	1	1	0	Occlusion-derived	virus	envelope	protein	ODV-E18
HTH_3	PF01381.22	gi|298675748|ref|YP_003727498.1|	-	0.0019	18.2	0.2	0.0039	17.2	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix
HTH_23	PF13384.6	gi|298675748|ref|YP_003727498.1|	-	0.009	15.8	0.0	0.026	14.3	0.0	1.7	2	0	0	2	2	2	1	Homeodomain-like	domain
P22_Cro	PF14549.6	gi|298675748|ref|YP_003727498.1|	-	0.0099	15.7	0.0	0.022	14.6	0.0	1.6	1	0	0	1	1	1	1	DNA-binding	transcriptional	regulator	Cro
DUF2811	PF10929.8	gi|298675748|ref|YP_003727498.1|	-	0.011	15.9	0.0	0.027	14.7	0.0	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF2811)
Cpn60_TCP1	PF00118.24	gi|298675748|ref|YP_003727498.1|	-	0.015	14.0	0.1	0.016	13.8	0.1	1.0	1	0	0	1	1	1	0	TCP-1/cpn60	chaperonin	family
Cro	PF09048.10	gi|298675748|ref|YP_003727498.1|	-	0.022	14.8	0.1	0.03	14.4	0.1	1.3	1	0	0	1	1	1	0	Cro
YdaS_antitoxin	PF15943.5	gi|298675748|ref|YP_003727498.1|	-	0.039	13.8	0.0	0.075	12.9	0.0	1.6	1	1	0	1	1	1	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
HTH_37	PF13744.6	gi|298675748|ref|YP_003727498.1|	-	0.054	13.5	0.0	0.14	12.1	0.0	1.7	1	1	1	2	2	2	0	Helix-turn-helix	domain
DUF4473	PF14747.6	gi|298675748|ref|YP_003727498.1|	-	0.054	14.0	0.0	0.091	13.3	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4473)
HTH_28	PF13518.6	gi|298675748|ref|YP_003727498.1|	-	0.057	13.6	0.0	0.096	12.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|298675748|ref|YP_003727498.1|	-	0.094	12.8	0.1	0.3	11.2	0.0	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
HTH_40	PF14493.6	gi|298675748|ref|YP_003727498.1|	-	0.11	13.0	0.0	0.15	12.5	0.0	1.3	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|298675748|ref|YP_003727498.1|	-	0.11	12.0	0.0	0.27	10.8	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Aminotran_5	PF00266.19	gi|298675749|ref|YP_003727499.1|	-	5.1e-93	312.0	0.1	5.9e-93	311.8	0.1	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|298675749|ref|YP_003727499.1|	-	1.1e-05	24.9	0.8	1.7e-05	24.4	0.3	1.5	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.21	gi|298675749|ref|YP_003727499.1|	-	3.8e-05	23.1	0.2	6.2e-05	22.4	0.2	1.3	1	1	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.21	gi|298675749|ref|YP_003727499.1|	-	4.6e-05	22.8	0.0	0.0002	20.7	0.0	1.8	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|298675749|ref|YP_003727499.1|	-	0.05	12.1	0.1	0.095	11.2	0.1	1.4	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
Pyridoxal_deC	PF00282.19	gi|298675749|ref|YP_003727499.1|	-	0.12	11.1	0.0	0.19	10.4	0.0	1.3	1	0	0	1	1	1	0	Pyridoxal-dependent	decarboxylase	conserved	domain
NifU_N	PF01592.16	gi|298675750|ref|YP_003727500.1|	-	1.2e-50	170.9	0.2	1.5e-50	170.6	0.2	1.0	1	0	0	1	1	1	1	NifU-like	N	terminal	domain
CO_deh_flav_C	PF03450.17	gi|298675750|ref|YP_003727500.1|	-	0.086	13.0	0.1	0.14	12.3	0.1	1.3	1	1	0	1	1	1	0	CO	dehydrogenase	flavoprotein	C-terminal	domain
NAD_synthase	PF02540.17	gi|298675751|ref|YP_003727501.1|	-	5.8e-08	32.2	0.0	1.4e-07	30.9	0.0	1.6	2	0	0	2	2	2	1	NAD	synthase
ATP_bind_3	PF01171.20	gi|298675751|ref|YP_003727501.1|	-	0.0023	17.7	0.0	0.014	15.2	0.0	2.1	1	1	1	2	2	2	1	PP-loop	family
ThiI	PF02568.14	gi|298675751|ref|YP_003727501.1|	-	0.0058	16.2	0.0	0.02	14.5	0.0	1.9	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
QueC	PF06508.13	gi|298675751|ref|YP_003727501.1|	-	0.0087	15.6	0.0	0.057	12.9	0.0	2.2	1	1	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|298675751|ref|YP_003727501.1|	-	0.014	14.2	0.0	0.23	10.2	0.0	2.2	2	1	0	2	2	2	0	tRNA	methyl	transferase
Asn_synthase	PF00733.21	gi|298675751|ref|YP_003727501.1|	-	0.038	13.7	0.0	0.05	13.3	0.0	1.2	1	0	0	1	1	1	0	Asparagine	synthase
PAPS_reduct	PF01507.19	gi|298675751|ref|YP_003727501.1|	-	0.18	11.8	0.0	0.22	11.6	0.0	1.3	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
ThiI	PF02568.14	gi|298675753|ref|YP_003727503.1|	-	3.2e-63	212.9	0.0	4.7e-63	212.4	0.0	1.2	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.17	gi|298675753|ref|YP_003727503.1|	-	6.8e-18	65.2	0.0	1.2e-17	64.4	0.0	1.4	1	0	0	1	1	1	1	THUMP	domain
QueC	PF06508.13	gi|298675753|ref|YP_003727503.1|	-	0.00013	21.5	0.0	0.0036	16.8	0.0	2.2	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|298675753|ref|YP_003727503.1|	-	0.00026	19.9	0.0	0.00058	18.8	0.0	1.5	2	0	0	2	2	2	1	tRNA	methyl	transferase
HMA	PF00403.26	gi|298675754|ref|YP_003727504.1|	-	3.3e-20	72.3	0.3	3.7e-20	72.1	0.3	1.0	1	0	0	1	1	1	1	Heavy-metal-associated	domain
Hexapep	PF00132.24	gi|298675755|ref|YP_003727505.1|	-	3.2e-09	36.2	11.7	0.00011	21.8	0.7	3.7	3	1	0	3	3	3	2	Bacterial	transferase	hexapeptide	(six	repeats)
SATase_N	PF06426.14	gi|298675755|ref|YP_003727505.1|	-	0.0019	18.5	0.0	0.0044	17.4	0.0	1.6	1	1	0	1	1	1	1	Serine	acetyltransferase,	N-terminal
Hexapep_2	PF14602.6	gi|298675755|ref|YP_003727505.1|	-	1.3	8.8	17.3	0.076	12.8	1.5	3.9	4	1	0	4	4	4	0	Hexapeptide	repeat	of	succinyl-transferase
PALP	PF00291.25	gi|298675756|ref|YP_003727506.1|	-	3.8e-72	243.2	0.0	4.3e-72	243.0	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Usp	PF00582.26	gi|298675757|ref|YP_003727507.1|	-	4.7e-32	111.4	0.0	5.3e-32	111.3	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
GARS_N	PF02844.15	gi|298675757|ref|YP_003727507.1|	-	0.04	14.7	0.1	0.074	13.8	0.1	1.5	1	1	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	N	domain
Dioxygenase_N	PF04444.14	gi|298675758|ref|YP_003727508.1|	-	0.071	13.0	0.1	0.28	11.1	0.0	2.0	2	0	0	2	2	2	0	Catechol	dioxygenase	N	terminus
BCCT	PF02028.17	gi|298675759|ref|YP_003727509.1|	-	4.2e-186	619.1	41.1	4.8e-186	618.9	41.1	1.0	1	0	0	1	1	1	1	BCCT,	betaine/carnitine/choline	family	transporter
MMR_HSR1_Xtn	PF16897.5	gi|298675760|ref|YP_003727510.1|	-	1.2e-31	108.9	0.4	3.6e-31	107.3	0.4	1.9	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
MMR_HSR1	PF01926.23	gi|298675760|ref|YP_003727510.1|	-	6e-21	74.7	0.0	1.1e-20	73.8	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|298675760|ref|YP_003727510.1|	-	2.6e-19	69.0	0.0	5.4e-19	68.0	0.0	1.6	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|298675760|ref|YP_003727510.1|	-	6.6e-13	48.5	0.1	1.4e-12	47.4	0.1	1.5	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.23	gi|298675760|ref|YP_003727510.1|	-	0.0015	18.6	1.1	0.1	12.7	0.1	2.6	2	1	1	3	3	3	1	Dynamin	family
RsgA_GTPase	PF03193.16	gi|298675760|ref|YP_003727510.1|	-	0.0036	17.2	0.1	0.037	13.9	0.0	2.3	2	0	0	2	2	2	1	RsgA	GTPase
AIG1	PF04548.16	gi|298675760|ref|YP_003727510.1|	-	0.011	15.1	0.1	0.028	13.8	0.0	1.7	2	0	0	2	2	2	0	AIG1	family
YchF-GTPase_C	PF06071.13	gi|298675760|ref|YP_003727510.1|	-	0.023	14.8	0.3	0.14	12.4	0.0	2.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF933)
Arf	PF00025.21	gi|298675760|ref|YP_003727510.1|	-	0.031	13.7	0.1	0.078	12.4	0.1	1.8	1	1	0	1	1	1	0	ADP-ribosylation	factor	family
SRPRB	PF09439.10	gi|298675760|ref|YP_003727510.1|	-	0.048	13.1	0.0	0.086	12.3	0.0	1.4	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
cobW	PF02492.19	gi|298675760|ref|YP_003727510.1|	-	0.073	12.7	0.4	2.4	7.7	0.0	2.5	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
MeaB	PF03308.16	gi|298675760|ref|YP_003727510.1|	-	0.1	11.6	0.1	0.22	10.5	0.1	1.5	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_16	PF13191.6	gi|298675760|ref|YP_003727510.1|	-	0.18	12.1	0.1	0.66	10.3	0.1	1.9	2	0	0	2	2	2	0	AAA	ATPase	domain
PBP_like	PF12727.7	gi|298675761|ref|YP_003727511.1|	-	7.1e-45	152.5	0.0	1e-44	152.0	0.0	1.2	1	0	0	1	1	1	1	PBP	superfamily	domain
MoeA_N	PF03453.17	gi|298675761|ref|YP_003727511.1|	-	1.8e-41	141.6	0.0	2.7e-41	141.0	0.0	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.24	gi|298675761|ref|YP_003727511.1|	-	5.4e-26	91.0	0.0	9.4e-26	90.2	0.0	1.4	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.15	gi|298675761|ref|YP_003727511.1|	-	1.1e-12	47.9	0.0	2.6e-12	46.7	0.0	1.7	1	0	0	1	1	1	1	MoeA	C-terminal	region	(domain	IV)
Aminotran_4	PF01063.19	gi|298675762|ref|YP_003727512.1|	-	1.5e-55	188.5	0.0	1.7e-55	188.3	0.0	1.0	1	0	0	1	1	1	1	Amino-transferase	class	IV
Ig_J_chain	PF15097.6	gi|298675762|ref|YP_003727512.1|	-	0.065	13.1	0.0	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	Immunoglobulin	J	chain
AFOR_N	PF02730.15	gi|298675763|ref|YP_003727513.1|	-	9.4e-29	100.7	0.0	1.5e-28	100.0	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
AFOR_C	PF01314.18	gi|298675763|ref|YP_003727513.1|	-	1.2e-12	47.5	0.0	3e-12	46.3	0.0	1.6	1	1	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
Pico_P2A	PF00947.19	gi|298675763|ref|YP_003727513.1|	-	0.16	12.0	0.1	0.33	11.0	0.1	1.5	1	0	0	1	1	1	0	Picornavirus	core	protein	2A
OpuAC	PF04069.12	gi|298675765|ref|YP_003727515.1|	-	6.3e-60	202.9	0.2	7.2e-60	202.7	0.2	1.0	1	0	0	1	1	1	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
LEAP-2	PF07359.11	gi|298675765|ref|YP_003727515.1|	-	0.071	12.9	0.0	0.15	11.9	0.0	1.4	1	0	0	1	1	1	0	Liver-expressed	antimicrobial	peptide	2	precursor	(LEAP-2)
Chi-conotoxin	PF16981.5	gi|298675765|ref|YP_003727515.1|	-	0.093	13.0	0.0	0.17	12.1	0.0	1.4	1	0	0	1	1	1	0	chi-Conotoxin	or	t	superfamily
DUF61	PF01886.16	gi|298675766|ref|YP_003727516.1|	-	1.5e-37	128.4	0.5	1.7e-37	128.3	0.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
Exc	PF07825.11	gi|298675766|ref|YP_003727516.1|	-	0.17	11.9	0.0	0.28	11.2	0.0	1.4	1	0	0	1	1	1	0	Excisionase-like	protein
DUF2207	PF09972.9	gi|298675767|ref|YP_003727517.1|	-	0.32	9.7	1.7	0.37	9.5	1.7	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF2975	PF11188.8	gi|298675767|ref|YP_003727517.1|	-	0.44	10.4	6.0	0.44	10.4	0.4	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2975)
TssO	PF17561.2	gi|298675767|ref|YP_003727517.1|	-	8.3	6.5	7.1	1.6	8.8	2.7	2.0	1	1	0	2	2	2	0	Type	VI	secretion	system,	TssO
HTH_5	PF01022.20	gi|298675769|ref|YP_003727519.1|	-	2e-12	46.7	0.1	5e-12	45.5	0.1	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|298675769|ref|YP_003727519.1|	-	2.4e-08	33.9	0.0	3.6e-08	33.3	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|298675769|ref|YP_003727519.1|	-	4.3e-05	23.0	0.3	0.00011	21.7	0.3	1.7	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|298675769|ref|YP_003727519.1|	-	0.00015	21.6	0.0	0.0004	20.3	0.0	1.7	1	0	0	1	1	1	1	MarR	family
DUF4430	PF14478.6	gi|298675769|ref|YP_003727519.1|	-	0.0013	19.3	0.2	0.0056	17.2	0.2	2.0	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4430)
TrmB	PF01978.19	gi|298675769|ref|YP_003727519.1|	-	0.0049	16.7	0.0	0.026	14.4	0.0	2.1	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|298675769|ref|YP_003727519.1|	-	0.0078	16.1	0.0	0.012	15.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.20	gi|298675769|ref|YP_003727519.1|	-	0.015	15.6	0.2	0.043	14.2	0.1	1.7	1	1	0	1	1	1	0	Transcriptional	regulator
HTH_34	PF13601.6	gi|298675769|ref|YP_003727519.1|	-	0.065	13.4	0.1	0.49	10.6	0.0	2.3	1	1	2	3	3	3	0	Winged	helix	DNA-binding	domain
HTH_45	PF14947.6	gi|298675769|ref|YP_003727519.1|	-	0.066	13.2	0.5	0.31	11.0	0.1	2.1	2	0	0	2	2	2	0	Winged	helix-turn-helix
HCV_NS5a_C	PF12941.7	gi|298675769|ref|YP_003727519.1|	-	0.087	12.7	0.1	0.12	12.2	0.1	1.1	1	0	0	1	1	1	0	HCV	NS5a	protein	C-terminal	region
HTH_28	PF13518.6	gi|298675769|ref|YP_003727519.1|	-	0.089	12.9	0.0	0.17	12.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_1	PF00126.27	gi|298675769|ref|YP_003727519.1|	-	0.097	12.6	0.0	0.17	11.9	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_IclR	PF09339.10	gi|298675769|ref|YP_003727519.1|	-	0.11	12.3	0.0	0.88	9.4	0.0	2.1	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
PGF-CTERM	PF18204.1	gi|298675770|ref|YP_003727520.1|	-	6.2e-08	32.4	0.1	1.1e-07	31.6	0.1	1.4	1	0	0	1	1	1	1	PGF-CTERM	motif
WXG100	PF06013.12	gi|298675770|ref|YP_003727520.1|	-	5e-06	26.7	0.9	0.34	11.2	0.0	4.1	6	0	0	6	6	4	2	Proteins	of	100	residues	with	WXG
TMF_TATA_bd	PF12325.8	gi|298675770|ref|YP_003727520.1|	-	2.8e-05	24.3	25.5	0.002	18.3	5.9	3.3	1	1	2	4	4	3	2	TATA	element	modulatory	factor	1	TATA	binding
TcdB_N	PF12918.7	gi|298675770|ref|YP_003727520.1|	-	0.00094	19.4	2.3	1.3	9.3	0.1	2.8	2	0	0	2	2	2	2	TcdB	toxin	N-terminal	helical	domain
HemX	PF04375.14	gi|298675770|ref|YP_003727520.1|	-	0.0019	17.6	7.5	0.079	12.2	0.3	3.1	2	2	1	3	3	3	2	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
Laminin_II	PF06009.12	gi|298675770|ref|YP_003727520.1|	-	0.0047	16.9	25.4	0.18	11.8	0.9	3.4	2	2	2	4	4	4	4	Laminin	Domain	II
LPP	PF04728.13	gi|298675770|ref|YP_003727520.1|	-	0.011	16.1	5.4	7.7	7.0	0.7	4.1	4	0	0	4	4	4	0	Lipoprotein	leucine-zipper
CENP-B_N	PF04218.13	gi|298675770|ref|YP_003727520.1|	-	0.015	14.9	0.1	2.1	8.0	0.0	2.8	2	0	0	2	2	2	0	CENP-B	N-terminal	DNA-binding	domain
HisKA	PF00512.25	gi|298675770|ref|YP_003727520.1|	-	0.016	15.3	5.9	4.5	7.4	0.1	4.6	2	2	1	3	3	3	0	His	Kinase	A	(phospho-acceptor)	domain
Syntaxin_2	PF14523.6	gi|298675770|ref|YP_003727520.1|	-	0.019	15.3	21.8	2.9	8.3	2.2	4.5	2	2	2	4	4	4	0	Syntaxin-like	protein
CorA	PF01544.18	gi|298675770|ref|YP_003727520.1|	-	0.03	13.6	13.6	0.25	10.6	2.4	2.5	2	0	0	2	2	2	0	CorA-like	Mg2+	transporter	protein
TPD52	PF04201.15	gi|298675770|ref|YP_003727520.1|	-	0.033	13.8	16.4	0.12	11.9	2.5	3.0	2	1	0	2	2	2	0	Tumour	protein	D52	family
DUF3502	PF12010.8	gi|298675770|ref|YP_003727520.1|	-	0.035	14.7	2.5	6.3	7.4	0.2	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3502)
DUF4874	PF16173.5	gi|298675770|ref|YP_003727520.1|	-	0.062	13.0	8.1	1.9	8.2	0.3	3.0	2	2	0	2	2	2	0	Domain	of	unknown	function	(DUF4874)
ER	PF01133.17	gi|298675770|ref|YP_003727520.1|	-	0.068	13.2	0.6	12	5.9	0.1	2.6	2	0	0	2	2	2	0	Enhancer	of	rudimentary
Apocytochr_F_N	PF16639.5	gi|298675770|ref|YP_003727520.1|	-	0.083	13.2	2.2	8.1	6.7	0.2	2.4	2	0	0	2	2	2	0	Apocytochrome	F,	N-terminal
DUF1107	PF06526.12	gi|298675770|ref|YP_003727520.1|	-	0.093	12.7	4.3	7.2	6.6	0.2	3.1	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF1107)
DUF4208	PF13907.6	gi|298675770|ref|YP_003727520.1|	-	0.098	13.1	15.4	13	6.3	0.1	4.4	2	2	2	4	4	4	0	Domain	of	unknown	function	(DUF4208)
CC2-LZ	PF16516.5	gi|298675770|ref|YP_003727520.1|	-	0.098	13.0	26.2	1.2	9.6	1.1	4.4	2	2	2	4	4	4	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
PMC2NT	PF08066.12	gi|298675770|ref|YP_003727520.1|	-	0.13	13.0	14.4	6.8	7.4	1.5	4.3	2	2	2	4	4	4	0	PMC2NT	(NUC016)	domain
DUF4226	PF10774.9	gi|298675770|ref|YP_003727520.1|	-	0.45	10.8	4.0	9.8	6.5	0.3	2.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4226)
IL5	PF02025.15	gi|298675770|ref|YP_003727520.1|	-	0.5	10.7	3.6	9.1	6.6	0.5	2.5	2	0	0	2	2	2	0	Interleukin	5
4HB_MCP_1	PF12729.7	gi|298675770|ref|YP_003727520.1|	-	0.53	9.8	11.8	2.7	7.5	2.7	2.6	2	1	0	2	2	2	0	Four	helix	bundle	sensory	module	for	signal	transduction
CdvA	PF18822.1	gi|298675770|ref|YP_003727520.1|	-	0.59	10.0	25.0	1.9	8.3	6.0	5.0	1	1	3	4	4	4	0	CdvA-like	coiled-coil	domain
SKA1	PF07160.12	gi|298675770|ref|YP_003727520.1|	-	0.67	9.8	32.4	1.6	8.6	0.5	4.0	1	1	3	4	4	4	0	Spindle	and	kinetochore-associated	protein	1
ING	PF12998.7	gi|298675770|ref|YP_003727520.1|	-	0.69	10.5	22.0	2.4	8.8	4.6	4.0	2	2	2	4	4	4	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
DUF948	PF06103.11	gi|298675770|ref|YP_003727520.1|	-	0.69	10.2	20.4	3.1	8.1	0.8	4.9	1	1	2	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF1664	PF07889.12	gi|298675770|ref|YP_003727520.1|	-	0.7	9.9	26.4	0.84	9.7	1.0	4.3	2	2	2	4	4	4	0	Protein	of	unknown	function	(DUF1664)
KxDL	PF10241.9	gi|298675770|ref|YP_003727520.1|	-	0.97	9.8	9.2	28	5.1	0.1	4.1	4	0	0	4	4	4	0	Uncharacterized	conserved	protein
EzrA	PF06160.12	gi|298675770|ref|YP_003727520.1|	-	1	7.4	34.4	0.15	10.2	2.5	3.7	1	1	2	3	3	3	0	Septation	ring	formation	regulator,	EzrA
RNA_pol_Rpb2_6	PF00562.28	gi|298675770|ref|YP_003727520.1|	-	1.1	8.2	15.7	1.1	8.3	2.6	2.2	1	1	0	2	2	2	0	RNA	polymerase	Rpb2,	domain	6
Leu_zip	PF15294.6	gi|298675770|ref|YP_003727520.1|	-	1.2	8.6	25.6	1.2	8.6	8.4	2.3	1	1	1	2	2	2	0	Leucine	zipper
DUF745	PF05335.13	gi|298675770|ref|YP_003727520.1|	-	1.3	8.7	14.1	2.1	8.1	3.8	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF745)
Syntaxin-18_N	PF10496.9	gi|298675770|ref|YP_003727520.1|	-	1.4	9.2	20.9	11	6.3	0.2	5.1	3	2	2	5	5	5	0	SNARE-complex	protein	Syntaxin-18	N-terminus
GIT1_C	PF12205.8	gi|298675770|ref|YP_003727520.1|	-	1.6	8.9	13.5	4.4	7.4	2.2	3.2	1	1	2	4	4	4	0	G	protein-coupled	receptor	kinase-interacting	protein	1	C	term
TBCC_N	PF16752.5	gi|298675770|ref|YP_003727520.1|	-	1.6	9.2	23.7	0.43	11.0	2.2	3.9	2	2	2	4	4	4	0	Tubulin-specific	chaperone	C	N-terminal	domain
HeLo	PF14479.6	gi|298675770|ref|YP_003727520.1|	-	2	8.2	14.9	4.6	7.0	3.8	2.4	1	1	0	2	2	2	0	Prion-inhibition	and	propagation
Cluap1	PF10234.9	gi|298675770|ref|YP_003727520.1|	-	2.2	7.6	29.0	1.1	8.6	7.9	2.9	1	1	2	3	3	3	0	Clusterin-associated	protein-1
Fez1	PF06818.15	gi|298675770|ref|YP_003727520.1|	-	2.6	8.4	31.8	3.3	8.1	4.1	3.5	1	1	1	3	3	3	0	Fez1
Borrelia_lipo_1	PF05714.11	gi|298675770|ref|YP_003727520.1|	-	2.9	7.6	20.2	6.9	6.4	4.9	3.1	2	2	1	3	3	3	0	Borrelia	burgdorferi	virulent	strain	associated	lipoprotein
TPR_MLP1_2	PF07926.12	gi|298675770|ref|YP_003727520.1|	-	2.9	7.9	28.5	0.65	10.1	5.6	3.1	2	1	1	3	3	3	0	TPR/MLP1/MLP2-like	protein
ENTH	PF01417.20	gi|298675770|ref|YP_003727520.1|	-	3.2	7.8	9.6	7.9	6.6	0.9	3.2	2	1	0	3	3	2	0	ENTH	domain
BLOC1_2	PF10046.9	gi|298675770|ref|YP_003727520.1|	-	3.2	8.1	17.9	8.3	6.8	3.5	4.2	1	1	4	5	5	5	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Occludin_ELL	PF07303.13	gi|298675770|ref|YP_003727520.1|	-	3.2	8.5	18.4	18	6.1	0.6	4.6	1	1	4	5	5	5	0	Occludin	homology	domain
PI3K_1B_p101	PF10486.9	gi|298675770|ref|YP_003727520.1|	-	4.6	4.9	26.9	3.1	5.5	8.6	2.0	1	1	1	2	2	2	0	Phosphoinositide	3-kinase	gamma	adapter	protein	p101	subunit
DUF883	PF05957.13	gi|298675770|ref|YP_003727520.1|	-	5.8	7.6	10.3	11	6.7	0.1	4.0	3	1	1	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF883)
DUF148	PF02520.17	gi|298675770|ref|YP_003727520.1|	-	8.9	6.5	27.0	7.9	6.6	1.0	4.6	1	1	3	5	5	5	0	Domain	of	unknown	function	DUF148
DUF4407	PF14362.6	gi|298675770|ref|YP_003727520.1|	-	9.1	5.5	10.5	4.1	6.7	4.2	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
FAP206	PF12018.8	gi|298675770|ref|YP_003727520.1|	-	9.4	5.6	11.7	9.8	5.6	1.8	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function
CbiM	PF01891.16	gi|298675771|ref|YP_003727521.1|	-	2.4e-46	158.2	20.0	2.7e-46	158.0	20.0	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
DctQ	PF04290.12	gi|298675771|ref|YP_003727521.1|	-	1.1	9.2	9.9	1.1	9.2	7.3	2.1	1	1	1	2	2	2	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
DUF2530	PF10745.9	gi|298675771|ref|YP_003727521.1|	-	5.9	7.2	8.5	1.1	9.6	0.5	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2530)
SdrD_B	PF17210.3	gi|298675772|ref|YP_003727522.1|	-	0.0069	16.6	0.1	0.011	15.9	0.1	1.3	1	0	0	1	1	1	1	SdrD	B-like	domain
bMG3	PF11974.8	gi|298675772|ref|YP_003727522.1|	-	0.014	15.5	0.0	0.018	15.1	0.0	1.3	1	0	0	1	1	1	0	Bacterial	alpha-2-macroglobulin	MG3	domain
CarbopepD_reg_2	PF13715.6	gi|298675772|ref|YP_003727522.1|	-	0.061	13.3	0.3	0.11	12.5	0.3	1.5	1	0	0	1	1	1	0	CarboxypepD_reg-like	domain
CarboxypepD_reg	PF13620.6	gi|298675772|ref|YP_003727522.1|	-	0.089	13.1	0.0	0.15	12.3	0.0	1.4	1	1	0	1	1	1	0	Carboxypeptidase	regulatory-like	domain
TTR-52	PF01060.23	gi|298675772|ref|YP_003727522.1|	-	0.11	13.2	0.1	0.25	12.1	0.1	1.5	1	1	0	1	1	1	0	Transthyretin-like	family
EMP24_GP25L	PF01105.24	gi|298675772|ref|YP_003727522.1|	-	0.22	11.4	2.2	0.29	11.1	1.8	1.3	1	1	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
CorA	PF01544.18	gi|298675772|ref|YP_003727522.1|	-	0.69	9.2	2.1	1	8.6	2.1	1.2	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
CbiQ	PF02361.16	gi|298675773|ref|YP_003727523.1|	-	2.7e-38	131.8	9.9	4.1e-38	131.2	9.9	1.2	1	0	0	1	1	1	1	Cobalt	transport	protein
NADH-u_ox-rdase	PF10785.9	gi|298675773|ref|YP_003727523.1|	-	3.3	8.4	6.9	10	6.9	0.4	3.3	3	2	0	3	3	3	0	NADH-ubiquinone	oxidoreductase	complex	I,	21	kDa	subunit
ABC_tran	PF00005.27	gi|298675774|ref|YP_003727524.1|	-	9.1e-28	97.5	0.0	2.3e-27	96.2	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|298675774|ref|YP_003727524.1|	-	1.1e-14	55.0	0.6	2.6e-10	40.6	0.0	2.3	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|298675774|ref|YP_003727524.1|	-	4e-09	36.2	0.3	1.6e-07	31.0	0.3	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|298675774|ref|YP_003727524.1|	-	3.5e-05	23.7	2.7	0.13	12.0	0.2	2.4	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.6	gi|298675774|ref|YP_003727524.1|	-	7.6e-05	23.3	0.1	0.00016	22.3	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.6	gi|298675774|ref|YP_003727524.1|	-	0.00027	19.8	0.4	0.056	12.1	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.6	gi|298675774|ref|YP_003727524.1|	-	0.0021	17.7	0.0	0.03	13.9	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
AAA_22	PF13401.6	gi|298675774|ref|YP_003727524.1|	-	0.004	17.4	0.0	0.014	15.7	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
T2SSE	PF00437.20	gi|298675774|ref|YP_003727524.1|	-	0.0046	16.0	0.1	0.0073	15.4	0.1	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_24	PF13479.6	gi|298675774|ref|YP_003727524.1|	-	0.0065	16.2	0.1	0.018	14.8	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
ATPase_2	PF01637.18	gi|298675774|ref|YP_003727524.1|	-	0.0066	16.4	0.1	0.015	15.2	0.1	1.8	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
TniB	PF05621.11	gi|298675774|ref|YP_003727524.1|	-	0.01	15.2	0.2	0.18	11.2	0.0	2.2	2	0	0	2	2	2	0	Bacterial	TniB	protein
cobW	PF02492.19	gi|298675774|ref|YP_003727524.1|	-	0.014	15.0	0.3	0.06	12.9	0.0	1.9	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
ATP-synt_ab	PF00006.25	gi|298675774|ref|YP_003727524.1|	-	0.014	15.0	0.0	0.022	14.4	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
RsgA_GTPase	PF03193.16	gi|298675774|ref|YP_003727524.1|	-	0.016	15.1	0.0	0.036	14.0	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
AAA_29	PF13555.6	gi|298675774|ref|YP_003727524.1|	-	0.018	14.8	0.0	0.043	13.6	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.12	gi|298675774|ref|YP_003727524.1|	-	0.03	14.3	0.0	0.048	13.6	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA	PF00004.29	gi|298675774|ref|YP_003727524.1|	-	0.039	14.4	1.5	0.39	11.1	1.5	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.6	gi|298675774|ref|YP_003727524.1|	-	0.067	13.2	0.0	0.32	11.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.6	gi|298675774|ref|YP_003727524.1|	-	0.069	13.7	0.3	0.42	11.2	0.2	2.2	2	1	0	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|298675774|ref|YP_003727524.1|	-	0.07	12.6	0.3	0.21	11.1	0.1	1.8	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
AAA_28	PF13521.6	gi|298675774|ref|YP_003727524.1|	-	0.072	13.3	0.1	0.17	12.2	0.0	1.6	2	0	0	2	2	1	0	AAA	domain
BCA_ABC_TP_C	PF12399.8	gi|298675774|ref|YP_003727524.1|	-	0.074	13.0	0.0	0.13	12.2	0.0	1.5	1	0	0	1	1	1	0	Branched-chain	amino	acid	ATP-binding	cassette	transporter
YqzH	PF14164.6	gi|298675774|ref|YP_003727524.1|	-	0.098	12.7	1.0	0.3	11.2	0.2	2.1	2	0	0	2	2	2	0	YqzH-like	protein
NTPase_1	PF03266.15	gi|298675774|ref|YP_003727524.1|	-	0.11	12.4	0.1	0.33	10.9	0.1	1.8	1	0	0	1	1	1	0	NTPase
SRP54	PF00448.22	gi|298675774|ref|YP_003727524.1|	-	0.12	11.9	0.4	0.52	9.9	0.1	2.0	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_16	PF13191.6	gi|298675774|ref|YP_003727524.1|	-	0.13	12.7	0.0	0.33	11.3	0.0	1.7	2	0	0	2	2	2	0	AAA	ATPase	domain
OrfB_Zn_ribbon	PF07282.11	gi|298675775|ref|YP_003727525.1|	-	5.1e-25	87.2	2.3	3.6e-24	84.5	1.0	2.7	2	1	1	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675775|ref|YP_003727525.1|	-	1.6e-09	38.1	1.3	1.6e-09	38.1	1.3	1.7	2	0	0	2	2	2	1	Probable	transposase
HypA	PF01155.19	gi|298675775|ref|YP_003727525.1|	-	0.019	15.0	0.1	0.032	14.2	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DNA_RNApol_7kD	PF03604.13	gi|298675775|ref|YP_003727525.1|	-	0.045	13.4	6.1	0.15	11.8	6.1	1.9	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.12	gi|298675775|ref|YP_003727525.1|	-	0.14	11.7	0.2	0.3	10.6	0.2	1.5	1	0	0	1	1	1	0	TFIIB	zinc-binding
zinc_ribbon_4	PF13717.6	gi|298675775|ref|YP_003727525.1|	-	0.68	9.9	4.1	9.9	6.2	1.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298675775|ref|YP_003727525.1|	-	1.6	8.8	5.3	3.5	7.7	5.3	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|298675775|ref|YP_003727525.1|	-	2.9	7.7	5.6	8.9	6.1	0.4	2.4	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
B-block_TFIIIC	PF04182.12	gi|298675777|ref|YP_003727527.1|	-	3.9e-08	33.3	0.3	5.6e-08	32.8	0.3	1.2	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
MarR	PF01047.22	gi|298675777|ref|YP_003727527.1|	-	1.7e-06	27.8	0.1	2.9e-06	27.1	0.1	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|298675777|ref|YP_003727527.1|	-	0.00041	20.2	0.0	0.00059	19.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|298675777|ref|YP_003727527.1|	-	0.00075	19.0	0.1	0.0011	18.5	0.1	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|298675777|ref|YP_003727527.1|	-	0.0076	16.1	0.0	0.011	15.6	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|298675777|ref|YP_003727527.1|	-	0.013	16.0	0.0	0.017	15.6	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
RNA_pol_Rpc34	PF05158.12	gi|298675777|ref|YP_003727527.1|	-	0.1	12.0	1.0	0.57	9.5	0.0	1.9	1	1	1	2	2	2	0	RNA	polymerase	Rpc34	subunit
LSM	PF01423.22	gi|298675778|ref|YP_003727528.1|	-	4.7e-18	64.6	0.3	5.1e-18	64.5	0.3	1.0	1	0	0	1	1	1	1	LSM	domain
DUF3467	PF11950.8	gi|298675779|ref|YP_003727529.1|	-	9.8e-16	57.7	0.0	1.3e-15	57.4	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3467)
Sdh5	PF03937.16	gi|298675779|ref|YP_003727529.1|	-	0.16	12.0	0.0	0.29	11.1	0.0	1.3	1	0	0	1	1	1	0	Flavinator	of	succinate	dehydrogenase
DEAD	PF00270.29	gi|298675780|ref|YP_003727530.1|	-	7.9e-23	81.1	0.0	2e-22	79.8	0.0	1.7	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|298675780|ref|YP_003727530.1|	-	1.5e-13	51.0	0.0	5.6e-13	49.2	0.0	2.1	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|298675780|ref|YP_003727530.1|	-	8.6e-12	45.4	0.1	2e-11	44.2	0.1	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.23	gi|298675780|ref|YP_003727530.1|	-	0.00087	18.1	0.0	0.0012	17.6	0.0	1.2	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
AAA_34	PF13872.6	gi|298675780|ref|YP_003727530.1|	-	0.036	13.0	0.0	0.063	12.2	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	NTP	hydrolase	pore-1
ATPase	PF06745.13	gi|298675781|ref|YP_003727531.1|	-	7.7e-13	48.3	0.3	9.2e-13	48.1	0.3	1.1	1	0	0	1	1	1	1	KaiC
PAXNEB	PF05625.11	gi|298675781|ref|YP_003727531.1|	-	0.0014	17.8	0.0	0.0023	17.1	0.0	1.3	1	0	0	1	1	1	1	PAXNEB	protein
PNP_UDP_1	PF01048.20	gi|298675782|ref|YP_003727532.1|	-	5.2e-33	114.3	0.0	5.8e-33	114.1	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
DUF373	PF04123.13	gi|298675783|ref|YP_003727533.1|	-	6.8e-126	420.2	4.7	7.7e-126	420.1	4.7	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
MAF_flag10	PF01973.18	gi|298675784|ref|YP_003727534.1|	-	1.2e-31	109.7	0.2	1.5e-31	109.4	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
DUF2100	PF09873.9	gi|298675784|ref|YP_003727534.1|	-	0.078	12.8	0.2	0.38	10.6	0.2	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2100)
tRNA-synt_1	PF00133.22	gi|298675785|ref|YP_003727535.1|	-	3.3e-197	656.4	7.8	5.7e-197	655.7	7.8	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|298675785|ref|YP_003727535.1|	-	5.6e-36	123.8	1.3	1.3e-35	122.6	1.3	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|298675785|ref|YP_003727535.1|	-	1.4e-24	86.6	8.7	7.9e-12	44.6	1.0	4.1	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|298675785|ref|YP_003727535.1|	-	6.7e-05	22.4	0.2	0.0033	16.8	0.0	2.8	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.18	gi|298675785|ref|YP_003727535.1|	-	0.0011	18.0	0.0	0.0055	15.7	0.0	2.1	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1_2	PF13603.6	gi|298675785|ref|YP_003727535.1|	-	0.0014	18.2	0.0	0.0038	16.8	0.0	1.7	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
PUA	PF01472.20	gi|298675786|ref|YP_003727536.1|	-	2e-20	72.5	0.5	3.1e-20	71.9	0.5	1.3	1	0	0	1	1	1	1	PUA	domain
Pre-PUA	PF17832.1	gi|298675786|ref|YP_003727536.1|	-	5.5e-06	27.0	0.3	1.9e-05	25.2	0.3	1.9	1	1	0	1	1	1	1	Pre-PUA-like	domain
DUF1947	PF09183.10	gi|298675786|ref|YP_003727536.1|	-	3.5e-05	24.0	0.4	7.9e-05	22.9	0.3	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1947)
UPF0113	PF03657.13	gi|298675786|ref|YP_003727536.1|	-	0.003	17.8	0.2	0.0073	16.5	0.1	1.7	2	0	0	2	2	2	1	UPF0113	PUA	domain
SepF	PF04472.12	gi|298675787|ref|YP_003727537.1|	-	6.7e-12	45.5	0.3	1.1e-11	44.9	0.3	1.3	1	0	0	1	1	1	1	Cell	division	protein	SepF
zf-ZPR1	PF03367.13	gi|298675788|ref|YP_003727538.1|	-	1.3e-36	125.8	0.0	1.7e-36	125.5	0.0	1.1	1	0	0	1	1	1	1	ZPR1	zinc-finger	domain
CTU2	PF10288.9	gi|298675788|ref|YP_003727538.1|	-	0.011	16.0	0.5	2.8	8.2	0.0	2.3	2	0	0	2	2	2	0	Cytoplasmic	tRNA	2-thiolation	protein	2
TraH	PF06122.11	gi|298675788|ref|YP_003727538.1|	-	0.018	14.3	0.0	0.023	14.0	0.0	1.1	1	0	0	1	1	1	0	Conjugative	relaxosome	accessory	transposon	protein
tRNA-synt_2b	PF00587.25	gi|298675789|ref|YP_003727539.1|	-	1.3e-25	90.4	0.0	2.2e-25	89.7	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|298675789|ref|YP_003727539.1|	-	7.8e-21	74.0	0.1	1.6e-20	73.0	0.1	1.6	1	0	0	1	1	1	1	Anticodon	binding	domain
ProRS-C_1	PF09180.11	gi|298675789|ref|YP_003727539.1|	-	1.4e-14	54.0	0.0	2.8e-14	53.0	0.0	1.5	1	0	0	1	1	1	1	Prolyl-tRNA	synthetase,	C-terminal
ProRS-C_2	PF09181.10	gi|298675789|ref|YP_003727539.1|	-	0.0067	16.5	0.7	0.028	14.6	0.5	2.3	1	1	0	1	1	1	1	Prolyl-tRNA	synthetase,	C-terminal
Prim_Zn_Ribbon	PF08273.12	gi|298675789|ref|YP_003727539.1|	-	0.085	13.1	0.9	0.21	11.9	0.9	1.6	1	0	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
DBI_PRT	PF02277.17	gi|298675790|ref|YP_003727540.1|	-	0.053	12.7	0.2	0.084	12.1	0.2	1.3	1	0	0	1	1	1	0	Phosphoribosyltransferase
Staphostatin_A	PF09022.10	gi|298675790|ref|YP_003727540.1|	-	0.31	11.0	1.2	0.96	9.4	0.1	2.0	2	0	0	2	2	2	0	Staphostatin	A
DZR	PF12773.7	gi|298675791|ref|YP_003727541.1|	-	0.00013	21.9	2.4	0.00015	21.7	2.4	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc-ribbons_6	PF07191.12	gi|298675791|ref|YP_003727541.1|	-	0.0012	18.8	2.7	0.0013	18.7	2.7	1.1	1	0	0	1	1	1	1	zinc-ribbons
DUF2757	PF10955.8	gi|298675791|ref|YP_003727541.1|	-	0.034	14.4	6.5	0.54	10.5	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2757)
zf-RING_7	PF02591.15	gi|298675791|ref|YP_003727541.1|	-	0.08	13.1	4.9	1.1	9.5	3.4	2.2	1	1	0	1	1	1	0	C4-type	zinc	ribbon	domain
zf-B_box	PF00643.24	gi|298675791|ref|YP_003727541.1|	-	0.085	13.0	4.4	5.4	7.2	0.0	2.1	2	0	0	2	2	2	0	B-box	zinc	finger
ADK_lid	PF05191.14	gi|298675791|ref|YP_003727541.1|	-	0.15	12.0	4.2	2.2	8.3	0.7	2.1	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Rubredoxin_2	PF18073.1	gi|298675791|ref|YP_003727541.1|	-	0.17	11.7	4.6	0.48	10.2	0.7	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Zn-ribbon_8	PF09723.10	gi|298675791|ref|YP_003727541.1|	-	0.2	11.8	5.0	3.5	7.8	0.9	2.1	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-RRN7	PF11781.8	gi|298675791|ref|YP_003727541.1|	-	0.33	10.7	7.6	2.2	8.0	0.7	2.2	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Rdx	PF10262.9	gi|298675791|ref|YP_003727541.1|	-	0.44	10.8	2.7	3.6	7.8	0.3	2.0	1	1	1	2	2	2	0	Rdx	family
zf-RRPl_C4	PF17026.5	gi|298675792|ref|YP_003727542.1|	-	0.0087	16.2	1.2	0.011	15.9	1.2	1.1	1	0	0	1	1	1	1	Putative	ribonucleoprotein	zinc-finger	pf	C4	type
PADR1	PF08063.12	gi|298675792|ref|YP_003727542.1|	-	0.015	15.1	2.5	0.022	14.6	2.5	1.2	1	0	0	1	1	1	0	PADR1	(NUC008)	domain
Mu-like_Com	PF10122.9	gi|298675792|ref|YP_003727542.1|	-	0.016	14.7	0.1	0.095	12.2	0.1	1.9	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
zf-Dof	PF02701.15	gi|298675792|ref|YP_003727542.1|	-	1.6	8.9	9.2	22	5.3	9.2	2.0	1	1	0	1	1	1	0	Dof	domain,	zinc	finger
ABC2_membrane_5	PF13346.6	gi|298675793|ref|YP_003727543.1|	-	0.012	15.2	7.9	0.012	15.2	7.9	1.8	2	0	0	2	2	2	0	ABC-2	family	transporter	protein
DUF2157	PF09925.9	gi|298675793|ref|YP_003727543.1|	-	0.41	10.4	8.0	0.6	9.9	8.0	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2157)
DUF4307	PF14155.6	gi|298675793|ref|YP_003727543.1|	-	0.6	10.0	5.0	5.2	6.9	0.1	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4307)
DUF2583	PF10762.9	gi|298675793|ref|YP_003727543.1|	-	3.2	8.2	7.3	1.1	9.7	4.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2583)
MreB_Mbl	PF06723.13	gi|298675794|ref|YP_003727544.1|	-	3.6e-07	29.3	0.1	0.00041	19.3	0.0	2.4	3	0	0	3	3	3	2	MreB/Mbl	protein
FtsA	PF14450.6	gi|298675794|ref|YP_003727544.1|	-	2.1e-05	24.9	0.1	8.8e-05	22.9	0.0	2.0	2	1	0	2	2	2	1	Cell	division	protein	FtsA
AMMECR1	PF01871.17	gi|298675795|ref|YP_003727545.1|	-	1.3e-50	171.3	0.0	1.4e-50	171.1	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
PGK	PF00162.19	gi|298675796|ref|YP_003727546.1|	-	8.8e-108	360.6	0.7	1e-107	360.4	0.7	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
DRTGG	PF07085.12	gi|298675797|ref|YP_003727547.1|	-	1.2e-33	115.1	0.2	2.8e-33	113.8	0.2	1.7	1	0	0	1	1	1	1	DRTGG	domain
AAA_26	PF13500.6	gi|298675797|ref|YP_003727547.1|	-	4.9e-33	114.6	0.0	1.5e-32	113.0	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
CbiA	PF01656.23	gi|298675797|ref|YP_003727547.1|	-	9.3e-06	25.7	0.0	0.0011	19.0	0.0	2.7	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Hpr_kinase_N	PF02603.16	gi|298675797|ref|YP_003727547.1|	-	0.0011	18.9	0.0	0.012	15.7	0.0	2.4	1	1	1	2	2	2	1	HPr	Serine	kinase	N	terminus
ATP-grasp_5	PF13549.6	gi|298675798|ref|YP_003727548.1|	-	1.2e-81	273.4	0.2	2.7e-81	272.2	0.1	1.6	1	1	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.6	gi|298675798|ref|YP_003727548.1|	-	1.9e-55	186.5	2.5	7.1e-55	184.6	0.1	2.8	4	0	0	4	4	4	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|298675798|ref|YP_003727548.1|	-	1e-25	90.5	0.1	8.5e-25	87.5	0.0	2.5	2	0	0	2	2	2	1	CoA	binding	domain
CoA_binding	PF02629.19	gi|298675798|ref|YP_003727548.1|	-	2.1e-13	50.7	1.0	4.8e-13	49.6	0.2	2.1	2	0	0	2	2	2	1	CoA	binding	domain
ATP-grasp_2	PF08442.10	gi|298675798|ref|YP_003727548.1|	-	0.043	13.4	0.4	0.18	11.3	0.4	2.1	1	1	0	1	1	1	0	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|298675798|ref|YP_003727548.1|	-	0.066	12.7	0.1	0.13	11.7	0.1	1.4	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
GFO_IDH_MocA	PF01408.22	gi|298675798|ref|YP_003727548.1|	-	0.16	12.8	0.0	2.1	9.2	0.0	2.4	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
FMN_red	PF03358.15	gi|298675799|ref|YP_003727549.1|	-	7.5e-39	133.0	0.0	9.5e-39	132.6	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|298675799|ref|YP_003727549.1|	-	1.1e-11	44.8	0.0	1.4e-11	44.5	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
RecR	PF02132.15	gi|298675799|ref|YP_003727549.1|	-	0.26	10.9	3.9	0.12	11.9	1.6	1.6	2	0	0	2	2	2	0	RecR	protein
Voltage_CLC	PF00654.20	gi|298675800|ref|YP_003727550.1|	-	1.5e-88	297.4	31.8	1.5e-88	297.4	31.8	2.0	1	1	1	2	2	2	2	Voltage	gated	chloride	channel
CBS	PF00571.28	gi|298675800|ref|YP_003727550.1|	-	2e-22	79.4	1.4	9.1e-12	45.2	0.2	2.8	2	0	0	2	2	2	2	CBS	domain
GSDH	PF07995.11	gi|298675801|ref|YP_003727551.1|	-	1.3e-89	300.8	0.1	1.6e-89	300.5	0.1	1.1	1	0	0	1	1	1	1	Glucose	/	Sorbosone	dehydrogenase
SmpA_OmlA	PF04355.13	gi|298675801|ref|YP_003727551.1|	-	0.11	12.4	0.8	0.8	9.5	0.9	2.2	2	0	0	2	2	2	0	SmpA	/	OmlA	family
Resolvase	PF00239.21	gi|298675803|ref|YP_003727553.1|	-	2.7e-19	69.7	0.1	3.2e-19	69.5	0.1	1.1	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.7	gi|298675803|ref|YP_003727553.1|	-	0.0067	16.6	0.0	0.013	15.7	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|298675803|ref|YP_003727553.1|	-	0.074	13.1	0.0	0.18	11.9	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
Trp_syntA	PF00290.20	gi|298675803|ref|YP_003727553.1|	-	0.077	11.8	0.0	0.11	11.3	0.0	1.2	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
OrfB_IS605	PF01385.19	gi|298675804|ref|YP_003727554.1|	-	5.2e-24	84.8	0.1	1.1e-23	83.8	0.1	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675804|ref|YP_003727554.1|	-	2.4e-12	46.6	0.0	5.7e-12	45.4	0.0	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Glyco_hydro_97	PF10566.9	gi|298675804|ref|YP_003727554.1|	-	9.8e-05	21.8	0.7	0.00016	21.0	0.7	1.4	1	0	0	1	1	1	1	Glycoside	hydrolase	97
Dynamin_N	PF00350.23	gi|298675804|ref|YP_003727554.1|	-	0.027	14.5	0.6	0.056	13.5	0.1	1.8	2	0	0	2	2	2	0	Dynamin	family
ACP_PD	PF04336.12	gi|298675804|ref|YP_003727554.1|	-	0.11	12.9	1.8	0.47	10.9	0.3	2.7	2	2	1	3	3	3	0	Acyl	carrier	protein	phosphodiesterase
Muted	PF14942.6	gi|298675804|ref|YP_003727554.1|	-	0.12	12.7	2.2	0.13	12.6	0.3	2.0	2	0	0	2	2	2	0	Organelle	biogenesis,	Muted-like	protein
Radical_SAM	PF04055.21	gi|298675805|ref|YP_003727555.1|	-	7.6e-23	81.7	0.1	8.4e-22	78.3	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.20	gi|298675805|ref|YP_003727555.1|	-	1.5e-21	76.3	0.2	3.1e-21	75.3	0.2	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.20	gi|298675805|ref|YP_003727555.1|	-	9.4e-05	22.3	0.0	0.00018	21.4	0.0	1.6	1	0	0	1	1	1	1	TRAM	domain
B12-binding	PF02310.19	gi|298675805|ref|YP_003727555.1|	-	0.11	12.6	0.0	0.22	11.6	0.0	1.5	1	0	0	1	1	1	0	B12	binding	domain
FBPase_glpX	PF03320.13	gi|298675806|ref|YP_003727556.1|	-	4.4e-115	383.8	5.9	5.1e-115	383.6	5.9	1.0	1	0	0	1	1	1	1	Bacterial	fructose-1,6-bisphosphatase,	glpX-encoded
Ribul_P_3_epim	PF00834.19	gi|298675806|ref|YP_003727556.1|	-	0.038	13.4	0.2	0.59	9.5	0.1	2.2	2	0	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
CGI-121	PF08617.10	gi|298675807|ref|YP_003727557.1|	-	3.3e-09	37.1	0.1	4.3e-09	36.7	0.1	1.0	1	0	0	1	1	1	1	Kinase	binding	protein	CGI-121
PALP	PF00291.25	gi|298675808|ref|YP_003727558.1|	-	2e-79	267.1	0.4	2.3e-79	266.9	0.4	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
tRNA-synt_1	PF00133.22	gi|298675809|ref|YP_003727559.1|	-	4.6e-62	210.1	8.7	1.4e-44	152.3	2.4	2.7	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.11	gi|298675809|ref|YP_003727559.1|	-	1.5e-26	93.0	1.9	5e-12	45.3	0.0	3.5	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.13	gi|298675809|ref|YP_003727559.1|	-	5.6e-23	81.6	1.9	5.9e-23	81.5	0.3	1.9	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.19	gi|298675809|ref|YP_003727559.1|	-	5.6e-10	39.0	0.1	9.6e-07	28.4	0.0	2.8	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.6	gi|298675809|ref|YP_003727559.1|	-	2.7e-09	36.8	0.1	7.1e-09	35.4	0.1	1.6	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1d	PF00750.19	gi|298675809|ref|YP_003727559.1|	-	0.0031	16.5	0.0	0.013	14.5	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(R)
tRNA-synt_1f	PF01921.18	gi|298675809|ref|YP_003727559.1|	-	0.019	13.9	0.0	0.019	13.9	0.0	2.2	4	0	0	4	4	4	0	tRNA	synthetases	class	I	(K)
Cache_3-Cache_2	PF17201.4	gi|298675810|ref|YP_003727560.1|	-	6e-50	170.2	5.0	6e-50	170.2	5.0	1.8	2	0	0	2	2	2	1	Cache	3/Cache	2	fusion	domain
sCache_3_3	PF17202.4	gi|298675810|ref|YP_003727560.1|	-	5.4e-24	84.7	2.1	1.7e-23	83.1	1.6	2.2	2	0	0	2	2	2	1	Single	cache	domain	3
HATPase_c	PF02518.26	gi|298675810|ref|YP_003727560.1|	-	9.9e-22	77.6	0.1	3.4e-21	75.8	0.1	1.9	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HAMP	PF00672.25	gi|298675810|ref|YP_003727560.1|	-	3.5e-16	59.3	0.0	7e-16	58.3	0.0	1.6	1	0	0	1	1	1	1	HAMP	domain
dCache_1	PF02743.18	gi|298675810|ref|YP_003727560.1|	-	2.1e-14	53.9	10.5	2.1e-14	53.9	10.5	1.9	3	0	0	3	3	3	1	Cache	domain
dCache_2	PF08269.11	gi|298675810|ref|YP_003727560.1|	-	1.8e-12	47.1	2.2	1.8e-12	47.1	2.2	3.3	3	0	0	3	3	3	1	Cache	domain
sCache_2	PF17200.4	gi|298675810|ref|YP_003727560.1|	-	4.5e-11	42.8	0.6	4.5e-11	42.8	0.6	2.3	2	0	0	2	2	2	1	Single	Cache	domain	2
HisKA	PF00512.25	gi|298675810|ref|YP_003727560.1|	-	7.6e-07	29.1	0.1	2.1e-06	27.7	0.1	1.8	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
sCache_3_2	PF17203.4	gi|298675810|ref|YP_003727560.1|	-	7.8e-06	26.1	0.0	0.00036	20.7	0.0	2.5	1	1	1	2	2	2	1	Single	cache	domain	3
SPOB_a	PF14689.6	gi|298675810|ref|YP_003727560.1|	-	0.0037	17.0	0.9	0.068	12.9	0.1	3.0	2	1	0	2	2	2	1	Sensor_kinase_SpoOB-type,	alpha-helical	domain
HATPase_c_2	PF13581.6	gi|298675810|ref|YP_003727560.1|	-	0.014	15.4	0.0	0.032	14.2	0.0	1.6	1	0	0	1	1	1	0	Histidine	kinase-like	ATPase	domain
CN_hydrolase	PF00795.22	gi|298675811|ref|YP_003727561.1|	-	4.5e-51	173.7	0.0	5e-51	173.5	0.0	1.0	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
HTH_56	PF18662.1	gi|298675812|ref|YP_003727562.1|	-	0.0069	16.4	0.2	0.26	11.4	0.1	2.5	2	1	1	3	3	3	1	Cch	helix	turn	helix	domain
PvlArgDC	PF01862.16	gi|298675813|ref|YP_003727563.1|	-	2.7e-60	202.9	0.0	3e-60	202.7	0.0	1.0	1	0	0	1	1	1	1	Pyruvoyl-dependent	arginine	decarboxylase	(PvlArgDC)
ArsR	PF09824.9	gi|298675814|ref|YP_003727564.1|	-	3.9e-69	231.3	0.3	4.4e-69	231.1	0.3	1.0	1	0	0	1	1	1	1	ArsR	transcriptional	regulator
Sec8_exocyst	PF04048.14	gi|298675814|ref|YP_003727564.1|	-	0.0019	18.1	0.6	0.0042	17.0	0.2	1.6	2	0	0	2	2	2	1	Sec8	exocyst	complex	component	specific	domain
TBCC_N	PF16752.5	gi|298675814|ref|YP_003727564.1|	-	0.057	13.9	1.1	0.31	11.5	0.4	1.9	1	1	1	2	2	2	0	Tubulin-specific	chaperone	C	N-terminal	domain
SMC_ScpB	PF04079.16	gi|298675814|ref|YP_003727564.1|	-	0.083	12.5	0.0	3.2	7.4	0.0	2.2	2	0	0	2	2	2	0	Segregation	and	condensation	complex	subunit	ScpB
ApoLp-III	PF07464.11	gi|298675814|ref|YP_003727564.1|	-	0.091	12.9	0.7	0.27	11.3	0.3	2.0	1	1	1	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
PI3K_P85_iSH2	PF16454.5	gi|298675814|ref|YP_003727564.1|	-	0.21	11.1	3.1	0.33	10.5	1.6	1.8	1	1	0	2	2	2	0	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
HTH_24	PF13412.6	gi|298675815|ref|YP_003727565.1|	-	2.9e-10	39.5	0.0	9.2e-10	37.9	0.0	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|298675815|ref|YP_003727565.1|	-	6.7e-08	32.3	0.0	1.8e-07	30.9	0.0	1.7	2	0	0	2	2	1	1	MarR	family
MarR	PF01047.22	gi|298675815|ref|YP_003727565.1|	-	9.8e-08	31.8	0.0	4.1e-07	29.8	0.0	2.0	2	0	0	2	2	2	1	MarR	family
HTH_Crp_2	PF13545.6	gi|298675815|ref|YP_003727565.1|	-	6.2e-06	26.1	0.3	4.3e-05	23.4	0.0	2.4	3	0	0	3	3	2	1	Crp-like	helix-turn-helix	domain
HTH_11	PF08279.12	gi|298675815|ref|YP_003727565.1|	-	2.8e-05	23.9	0.0	6.4e-05	22.8	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_3	PF01381.22	gi|298675815|ref|YP_003727565.1|	-	0.00015	21.8	0.1	0.0028	17.7	0.0	2.5	2	0	0	2	2	2	1	Helix-turn-helix
Rrf2	PF02082.20	gi|298675815|ref|YP_003727565.1|	-	0.00052	20.3	0.0	0.0015	18.8	0.0	1.8	1	0	0	1	1	1	1	Transcriptional	regulator
Mnd1	PF03962.15	gi|298675815|ref|YP_003727565.1|	-	0.0027	17.9	0.0	0.024	14.9	0.0	2.3	2	0	0	2	2	2	1	Mnd1	HTH	domain
HTH_45	PF14947.6	gi|298675815|ref|YP_003727565.1|	-	0.003	17.5	0.0	0.0072	16.3	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_IclR	PF09339.10	gi|298675815|ref|YP_003727565.1|	-	0.0032	17.2	0.0	0.0064	16.3	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Fe_dep_repress	PF01325.19	gi|298675815|ref|YP_003727565.1|	-	0.0037	17.4	0.0	0.011	15.9	0.0	1.8	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_23	PF13384.6	gi|298675815|ref|YP_003727565.1|	-	0.0061	16.3	0.0	0.013	15.3	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_27	PF13463.6	gi|298675815|ref|YP_003727565.1|	-	0.0089	16.5	0.0	0.018	15.5	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
RPA_C	PF08784.11	gi|298675815|ref|YP_003727565.1|	-	0.011	16.4	0.0	0.11	13.2	0.0	2.3	3	0	0	3	3	2	0	Replication	protein	A	C	terminal
TrmB	PF01978.19	gi|298675815|ref|YP_003727565.1|	-	0.015	15.2	0.0	0.038	13.9	0.0	1.7	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_28	PF13518.6	gi|298675815|ref|YP_003727565.1|	-	0.033	14.3	0.0	0.086	13.0	0.0	1.7	2	0	0	2	2	1	0	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|298675815|ref|YP_003727565.1|	-	0.041	13.7	0.0	0.09	12.7	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
YdaS_antitoxin	PF15943.5	gi|298675815|ref|YP_003727565.1|	-	0.05	13.5	0.0	0.2	11.6	0.0	2.0	1	0	0	1	1	1	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
HTH_36	PF13730.6	gi|298675815|ref|YP_003727565.1|	-	0.055	13.4	0.0	0.12	12.4	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.6	gi|298675815|ref|YP_003727565.1|	-	0.1	12.4	0.0	0.42	10.5	0.0	2.1	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
HTH_13	PF11972.8	gi|298675815|ref|YP_003727565.1|	-	0.12	12.4	0.0	0.28	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	DNA	binding	domain
P22_Cro	PF14549.6	gi|298675815|ref|YP_003727565.1|	-	0.13	12.1	0.0	0.36	10.7	0.0	1.7	1	0	0	1	1	1	0	DNA-binding	transcriptional	regulator	Cro
Metallophos_2	PF12850.7	gi|298675816|ref|YP_003727566.1|	-	5.1e-28	98.3	0.0	6.3e-28	98.0	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|298675816|ref|YP_003727566.1|	-	3.9e-05	24.2	1.0	0.0037	17.8	0.1	2.2	1	1	0	2	2	2	2	Calcineurin-like	phosphoesterase
PAZ	PF02170.22	gi|298675819|ref|YP_003727569.1|	-	0.064	13.1	0.0	0.12	12.2	0.0	1.6	1	0	0	1	1	1	0	PAZ	domain
Na_H_Exchanger	PF00999.21	gi|298675820|ref|YP_003727570.1|	-	4.2e-46	157.5	47.8	5.3e-46	157.1	47.8	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.18	gi|298675820|ref|YP_003727570.1|	-	3.1e-28	98.4	0.4	6.8e-28	97.3	0.4	1.6	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|298675820|ref|YP_003727570.1|	-	6.9e-11	41.8	0.6	1.5e-10	40.7	0.6	1.5	1	0	0	1	1	1	1	TrkA-C	domain
NAD_binding_7	PF13241.6	gi|298675820|ref|YP_003727570.1|	-	2.8e-08	34.1	0.5	6.3e-08	33.0	0.5	1.6	1	0	0	1	1	1	1	Putative	NAD(P)-binding
FAD_binding_3	PF01494.19	gi|298675820|ref|YP_003727570.1|	-	3.6e-07	29.8	0.0	4.8e-07	29.3	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|298675820|ref|YP_003727570.1|	-	9.3e-06	25.9	0.2	2.4e-05	24.6	0.2	1.8	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
ApbA	PF02558.16	gi|298675820|ref|YP_003727570.1|	-	1.3e-05	24.9	0.1	2.4e-05	24.0	0.1	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NAD_binding_2	PF03446.15	gi|298675820|ref|YP_003727570.1|	-	2.5e-05	24.5	0.1	4.7e-05	23.6	0.1	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.17	gi|298675820|ref|YP_003727570.1|	-	2.9e-05	24.6	0.1	9.9e-05	22.8	0.1	2.0	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
UDPG_MGDP_dh_N	PF03721.14	gi|298675820|ref|YP_003727570.1|	-	7.6e-05	22.4	0.3	0.00013	21.6	0.3	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_10	PF13460.6	gi|298675820|ref|YP_003727570.1|	-	0.00019	21.4	0.4	0.00034	20.6	0.4	1.4	1	0	0	1	1	1	1	NAD(P)H-binding
Shikimate_DH	PF01488.20	gi|298675820|ref|YP_003727570.1|	-	0.00037	20.6	0.5	0.0027	17.8	0.2	2.3	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
Epimerase	PF01370.21	gi|298675820|ref|YP_003727570.1|	-	0.0025	17.3	0.2	0.004	16.7	0.2	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
PglD_N	PF17836.1	gi|298675820|ref|YP_003727570.1|	-	0.0028	18.3	1.8	1.7	9.4	0.4	2.6	2	0	0	2	2	2	2	PglD	N-terminal	domain
2-Hacid_dh_C	PF02826.19	gi|298675820|ref|YP_003727570.1|	-	0.0034	16.8	0.0	0.008	15.6	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|298675820|ref|YP_003727570.1|	-	0.0049	16.2	0.1	0.0089	15.3	0.1	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
adh_short	PF00106.25	gi|298675820|ref|YP_003727570.1|	-	0.0056	16.2	0.1	0.013	14.9	0.1	1.6	1	0	0	1	1	1	1	short	chain	dehydrogenase
NmrA	PF05368.13	gi|298675820|ref|YP_003727570.1|	-	0.0073	15.9	0.3	0.012	15.1	0.3	1.3	1	0	0	1	1	1	1	NmrA-like	family
XdhC_C	PF13478.6	gi|298675820|ref|YP_003727570.1|	-	0.012	16.2	0.1	0.036	14.6	0.0	1.9	2	0	0	2	2	1	0	XdhC	Rossmann	domain
Pyr_redox_2	PF07992.14	gi|298675820|ref|YP_003727570.1|	-	0.017	14.4	0.1	0.029	13.6	0.1	1.3	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|298675820|ref|YP_003727570.1|	-	0.02	15.4	0.4	0.02	15.4	0.4	2.7	3	1	0	3	3	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_Gly3P_dh_N	PF01210.23	gi|298675820|ref|YP_003727570.1|	-	0.039	13.9	0.0	0.098	12.6	0.0	1.7	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
HI0933_like	PF03486.14	gi|298675820|ref|YP_003727570.1|	-	0.06	12.0	0.1	0.089	11.5	0.1	1.2	1	0	0	1	1	1	0	HI0933-like	protein
3HCDH_N	PF02737.18	gi|298675820|ref|YP_003727570.1|	-	0.064	13.1	0.2	0.12	12.3	0.2	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.12	gi|298675820|ref|YP_003727570.1|	-	0.099	11.7	0.0	0.15	11.1	0.0	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
DAO	PF01266.24	gi|298675820|ref|YP_003727570.1|	-	0.12	12.0	0.1	0.18	11.4	0.1	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Dimeth_Pyl	PF09505.10	gi|298675821|ref|YP_003727571.1|	-	2e-262	870.7	5.7	2.2e-262	870.5	5.7	1.0	1	0	0	1	1	1	1	Dimethylamine	methyltransferase	(Dimeth_PyL)
Antimicrobial_7	PF08102.11	gi|298675821|ref|YP_003727571.1|	-	0.044	14.0	0.0	0.093	13.0	0.0	1.5	1	0	0	1	1	1	0	Scorpion	antimicrobial	peptide
B12-binding	PF02310.19	gi|298675822|ref|YP_003727572.1|	-	3.7e-27	94.8	0.9	6e-27	94.1	0.9	1.3	1	0	0	1	1	1	1	B12	binding	domain
B12-binding_2	PF02607.17	gi|298675822|ref|YP_003727572.1|	-	7.4e-20	71.2	1.0	1.1e-19	70.6	0.3	1.7	2	0	0	2	2	2	1	B12	binding	domain
DUF3149	PF11346.8	gi|298675823|ref|YP_003727573.1|	-	0.052	13.2	0.4	0.052	13.2	0.4	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3149)
DUF2963	PF11178.8	gi|298675824|ref|YP_003727574.1|	-	0.021	14.5	0.1	0.036	13.8	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2963)
Glyco_hydro_56	PF01630.18	gi|298675824|ref|YP_003727574.1|	-	0.058	12.4	0.0	0.067	12.2	0.0	1.1	1	0	0	1	1	1	0	Hyaluronidase
EamA	PF00892.20	gi|298675825|ref|YP_003727575.1|	-	3.7e-11	43.3	51.2	7.9e-06	26.1	23.4	3.1	2	1	0	2	2	2	2	EamA-like	transporter	family
B12-binding	PF02310.19	gi|298675826|ref|YP_003727576.1|	-	4.6e-22	78.3	0.7	1e-21	77.2	0.7	1.5	1	0	0	1	1	1	1	B12	binding	domain
B12-binding_2	PF02607.17	gi|298675826|ref|YP_003727576.1|	-	4.2e-19	68.8	1.6	1e-18	67.5	0.4	2.2	2	1	0	2	2	2	1	B12	binding	domain
SpoVAD	PF07451.11	gi|298675826|ref|YP_003727576.1|	-	0.02	13.6	0.1	0.027	13.2	0.1	1.3	1	0	0	1	1	1	0	Stage	V	sporulation	protein	AD	(SpoVAD)
CRS1_YhbY	PF01985.21	gi|298675826|ref|YP_003727576.1|	-	0.032	14.4	0.1	0.5	10.6	0.0	2.2	2	0	0	2	2	2	0	CRS1	/	YhbY	(CRM)	domain
MTTB	PF06253.11	gi|298675827|ref|YP_003727577.1|	-	3.7e-93	312.2	0.0	4.9e-93	311.8	0.0	1.0	1	0	0	1	1	1	1	Trimethylamine	methyltransferase	(MTTB)
RACo_C_ter	PF14574.6	gi|298675829|ref|YP_003727579.1|	-	2e-71	240.1	0.9	6.6e-71	238.4	0.9	1.8	1	1	0	1	1	1	1	C-terminal	domain	of	RACo	the	ASKHA	domain
Raco_middle	PF17651.1	gi|298675829|ref|YP_003727579.1|	-	3e-11	43.3	0.0	7.7e-11	41.9	0.0	1.8	1	0	0	1	1	1	1	RACo	middle	region
Fer4_9	PF13187.6	gi|298675829|ref|YP_003727579.1|	-	5.7e-07	29.6	6.4	1.2e-06	28.6	6.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298675829|ref|YP_003727579.1|	-	1.5e-06	27.8	19.4	9.5e-05	22.1	3.7	2.8	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675829|ref|YP_003727579.1|	-	1.7e-06	28.0	9.2	4.2e-06	26.8	9.2	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675829|ref|YP_003727579.1|	-	4.5e-06	27.1	8.0	1.3e-05	25.7	8.1	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298675829|ref|YP_003727579.1|	-	5.2e-05	23.6	1.9	0.028	14.9	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675829|ref|YP_003727579.1|	-	0.00013	22.8	10.5	0.044	14.7	1.6	2.5	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|298675829|ref|YP_003727579.1|	-	0.00034	20.5	13.7	0.00094	19.2	2.4	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298675829|ref|YP_003727579.1|	-	0.00038	20.9	2.9	0.042	14.4	0.2	2.5	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675829|ref|YP_003727579.1|	-	0.00054	20.0	11.6	0.024	14.8	12.7	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298675829|ref|YP_003727579.1|	-	0.11	13.5	14.2	0.89	10.6	2.5	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|298675829|ref|YP_003727579.1|	-	0.28	11.8	11.9	0.4	11.3	3.1	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|298675829|ref|YP_003727579.1|	-	0.44	10.8	11.6	0.74	10.0	3.2	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
HCV_NS4a	PF01006.20	gi|298675830|ref|YP_003727580.1|	-	0.12	12.2	0.3	0.3	10.9	0.3	1.7	1	0	0	1	1	1	0	Hepatitis	C	virus	non-structural	protein	NS4a
Mnd1	PF03962.15	gi|298675832|ref|YP_003727582.1|	-	0.0036	17.6	1.5	0.014	15.7	0.2	2.4	3	0	0	3	3	3	1	Mnd1	HTH	domain
PaaX	PF07848.12	gi|298675832|ref|YP_003727582.1|	-	0.034	14.4	0.0	0.073	13.3	0.0	1.5	1	0	0	1	1	1	0	PaaX-like	protein
tRNA_anti-codon	PF01336.25	gi|298675833|ref|YP_003727583.1|	-	2.8e-07	30.4	4.5	0.56	10.2	0.0	4.5	4	1	0	4	4	4	3	OB-fold	nucleic	acid	binding	domain
CDC24_OB3	PF17244.2	gi|298675833|ref|YP_003727583.1|	-	0.00016	21.4	0.9	0.0017	18.1	0.1	2.5	2	1	0	2	2	2	1	Cell	division	control	protein	24,	OB	domain	3
POT1	PF02765.17	gi|298675833|ref|YP_003727583.1|	-	0.052	13.4	0.1	9.8	6.0	0.0	2.5	2	0	0	2	2	2	0	Telomeric	single	stranded	DNA	binding	POT1/CDC13
NUMOD4	PF07463.11	gi|298675833|ref|YP_003727583.1|	-	0.11	12.7	0.4	0.43	10.8	0.1	2.2	2	0	0	2	2	2	0	NUMOD4	motif
CBFD_NFYB_HMF	PF00808.23	gi|298675834|ref|YP_003727584.1|	-	5.7e-18	65.0	0.0	6.6e-18	64.7	0.0	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|298675834|ref|YP_003727584.1|	-	2e-09	37.9	0.0	2.5e-09	37.6	0.0	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
Bromo_TP	PF07524.13	gi|298675834|ref|YP_003727584.1|	-	2.9e-08	33.6	0.0	3.5e-08	33.4	0.0	1.0	1	0	0	1	1	1	1	Bromodomain	associated
CENP-T_C	PF15511.6	gi|298675834|ref|YP_003727584.1|	-	8.2e-08	32.3	0.0	8.6e-08	32.3	0.0	1.1	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
TFIID-31kDa	PF02291.15	gi|298675834|ref|YP_003727584.1|	-	4.9e-06	26.6	0.0	5.7e-06	26.4	0.0	1.0	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
CENP-S	PF15630.6	gi|298675834|ref|YP_003727584.1|	-	1.3e-05	25.5	0.0	1.4e-05	25.4	0.0	1.1	1	0	0	1	1	1	1	CENP-S	protein
TAF	PF02969.17	gi|298675834|ref|YP_003727584.1|	-	0.00045	20.3	0.1	0.00052	20.1	0.1	1.0	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
TFIID_20kDa	PF03847.13	gi|298675834|ref|YP_003727584.1|	-	0.0046	17.4	0.0	0.005	17.3	0.0	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	TFIID	subunit	A
DUF1931	PF09123.11	gi|298675834|ref|YP_003727584.1|	-	0.015	15.4	0.1	0.016	15.3	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1931)
Bromo_TP_like	PF17027.5	gi|298675834|ref|YP_003727584.1|	-	0.023	14.9	0.0	0.023	14.9	0.0	1.1	1	0	0	1	1	1	0	Histone-fold	protein
TFIID-18kDa	PF02269.16	gi|298675834|ref|YP_003727584.1|	-	0.027	14.5	0.0	0.03	14.4	0.0	1.1	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	18kD	subunit
Fer4_7	PF12838.7	gi|298675835|ref|YP_003727585.1|	-	7.1e-14	52.1	27.7	7.7e-09	36.0	8.9	1.7	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298675835|ref|YP_003727585.1|	-	1e-13	50.5	12.4	8.5e-07	28.5	2.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298675835|ref|YP_003727585.1|	-	5.2e-12	45.7	5.2	1.4e-05	25.1	0.8	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298675835|ref|YP_003727585.1|	-	2e-11	43.8	7.6	1.7e-06	28.0	0.8	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|298675835|ref|YP_003727585.1|	-	7.4e-11	41.6	10.3	1.6e-05	24.8	1.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298675835|ref|YP_003727585.1|	-	3.2e-10	40.0	17.6	1.2e-07	31.8	9.3	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675835|ref|YP_003727585.1|	-	3.8e-10	39.2	10.3	4.7e-05	23.2	1.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298675835|ref|YP_003727585.1|	-	1.2e-09	38.5	5.8	1.9e-09	37.8	5.8	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675835|ref|YP_003727585.1|	-	1.1e-08	35.9	7.4	9.1e-05	23.3	0.3	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.6	gi|298675835|ref|YP_003727585.1|	-	4.7e-06	27.1	7.3	2e-05	25.0	7.2	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298675835|ref|YP_003727585.1|	-	1e-05	25.7	7.6	0.0088	16.5	0.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|298675835|ref|YP_003727585.1|	-	9.7e-05	22.5	9.5	0.01	16.1	0.9	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298675835|ref|YP_003727585.1|	-	0.00013	22.4	14.4	0.069	13.7	3.0	2.8	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|298675835|ref|YP_003727585.1|	-	0.00048	20.9	11.6	0.024	15.5	1.6	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298675835|ref|YP_003727585.1|	-	0.003	18.2	8.7	0.17	12.6	2.1	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|298675835|ref|YP_003727585.1|	-	0.0049	17.7	16.5	0.0056	17.5	3.7	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
DUF4938	PF16292.5	gi|298675835|ref|YP_003727585.1|	-	0.14	11.4	0.0	0.14	11.4	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4938)
ETF_QO	PF05187.13	gi|298675835|ref|YP_003727585.1|	-	4.2	7.6	8.1	5	7.3	1.8	2.5	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Sm_multidrug_ex	PF06695.11	gi|298675836|ref|YP_003727586.1|	-	2.1e-40	138.1	2.7	2.8e-40	137.7	2.7	1.2	1	0	0	1	1	1	1	Putative	small	multi-drug	export	protein
Rep_fac_C	PF08542.11	gi|298675837|ref|YP_003727587.1|	-	3.3e-26	91.5	0.1	7.5e-26	90.4	0.1	1.6	1	0	0	1	1	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.29	gi|298675837|ref|YP_003727587.1|	-	1.9e-19	70.4	0.0	3.1e-18	66.5	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.6	gi|298675837|ref|YP_003727587.1|	-	1.5e-16	60.6	0.0	9.7e-11	41.7	0.0	2.5	1	1	1	2	2	2	2	DNA	polymerase	III,	delta	subunit
RuvB_N	PF05496.12	gi|298675837|ref|YP_003727587.1|	-	2.5e-08	33.8	0.0	2.9e-07	30.4	0.0	2.4	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Rad17	PF03215.15	gi|298675837|ref|YP_003727587.1|	-	1.2e-06	28.6	0.0	1.9e-06	27.9	0.0	1.5	1	0	0	1	1	1	1	Rad17	P-loop	domain
AAA_16	PF13191.6	gi|298675837|ref|YP_003727587.1|	-	1.5e-06	28.7	0.1	0.00024	21.5	0.0	2.8	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_14	PF13173.6	gi|298675837|ref|YP_003727587.1|	-	4e-06	26.9	0.0	8.1e-06	25.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_3	PF07726.11	gi|298675837|ref|YP_003727587.1|	-	1e-05	25.4	0.0	2e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta	PF06144.13	gi|298675837|ref|YP_003727587.1|	-	1.9e-05	24.5	0.0	0.00051	19.9	0.0	2.2	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
Mg_chelatase	PF01078.21	gi|298675837|ref|YP_003727587.1|	-	3.7e-05	23.2	0.0	0.0055	16.1	0.0	2.4	1	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
TIP49	PF06068.13	gi|298675837|ref|YP_003727587.1|	-	4e-05	23.0	0.0	0.00012	21.4	0.0	1.7	2	0	0	2	2	2	1	TIP49	P-loop	domain
AAA_assoc_2	PF16193.5	gi|298675837|ref|YP_003727587.1|	-	0.00011	22.5	0.2	0.00022	21.5	0.2	1.6	1	0	0	1	1	1	1	AAA	C-terminal	domain
ResIII	PF04851.15	gi|298675837|ref|YP_003727587.1|	-	0.00022	21.3	0.0	0.00081	19.4	0.0	1.9	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_18	PF13238.6	gi|298675837|ref|YP_003727587.1|	-	0.00076	20.0	0.0	0.015	15.8	0.0	2.5	2	1	0	2	2	2	1	AAA	domain
Sigma54_activat	PF00158.26	gi|298675837|ref|YP_003727587.1|	-	0.002	17.9	0.0	1	9.0	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_22	PF13401.6	gi|298675837|ref|YP_003727587.1|	-	0.0021	18.3	0.0	1.6	9.0	0.0	2.7	2	1	1	3	3	3	1	AAA	domain
IstB_IS21	PF01695.17	gi|298675837|ref|YP_003727587.1|	-	0.0037	17.0	0.0	0.01	15.6	0.0	1.8	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_5	PF07728.14	gi|298675837|ref|YP_003727587.1|	-	0.0063	16.5	0.0	0.054	13.5	0.0	2.3	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_2	PF07724.14	gi|298675837|ref|YP_003727587.1|	-	0.0066	16.6	0.0	0.041	14.0	0.0	2.3	1	1	2	3	3	3	1	AAA	domain	(Cdc48	subfamily)
AAA_11	PF13086.6	gi|298675837|ref|YP_003727587.1|	-	0.0083	15.9	0.0	0.012	15.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
PhoH	PF02562.16	gi|298675837|ref|YP_003727587.1|	-	0.045	13.2	0.0	3.5	7.0	0.0	2.3	2	0	0	2	2	2	0	PhoH-like	protein
AAA_7	PF12775.7	gi|298675837|ref|YP_003727587.1|	-	0.054	13.0	0.0	0.13	11.7	0.0	1.7	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
Viral_helicase1	PF01443.18	gi|298675837|ref|YP_003727587.1|	-	0.077	12.7	0.0	0.64	9.7	0.0	2.0	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
RNA_helicase	PF00910.22	gi|298675837|ref|YP_003727587.1|	-	0.084	13.3	0.0	0.19	12.1	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
DUF4870	PF09685.10	gi|298675838|ref|YP_003727588.1|	-	0.00016	21.8	4.3	0.0002	21.4	4.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4870)
CobS	PF02654.15	gi|298675838|ref|YP_003727588.1|	-	0.16	12.2	3.8	0.24	11.6	3.8	1.3	1	0	0	1	1	1	0	Cobalamin-5-phosphate	synthase
TM_helix	PF05552.12	gi|298675838|ref|YP_003727588.1|	-	3	7.9	10.1	4.2	7.4	0.6	3.0	2	1	0	2	2	2	0	Conserved	TM	helix
Fer4	PF00037.27	gi|298675839|ref|YP_003727589.1|	-	1.4e-20	72.2	46.1	7.3e-08	31.9	4.4	5.8	6	0	0	6	6	6	4	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298675839|ref|YP_003727589.1|	-	2.8e-17	62.6	49.3	4.2e-08	33.2	12.6	4.0	1	1	3	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675839|ref|YP_003727589.1|	-	4.7e-15	55.9	36.3	3.5e-08	33.9	11.5	4.7	3	3	1	4	4	4	3	4Fe-4S	dicluster	domain
FeS	PF04060.13	gi|298675839|ref|YP_003727589.1|	-	4.9e-15	54.9	4.2	4.9e-15	54.9	4.2	4.1	5	1	0	5	5	5	1	Putative	Fe-S	cluster
Fer4_6	PF12837.7	gi|298675839|ref|YP_003727589.1|	-	3.6e-14	52.1	42.8	6.7e-05	22.8	0.9	5.6	5	0	0	5	5	5	4	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|298675839|ref|YP_003727589.1|	-	1.7e-10	41.7	37.3	0.00044	21.1	14.2	5.0	4	1	1	5	5	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|298675839|ref|YP_003727589.1|	-	3.2e-10	39.5	45.9	8.2e-05	22.5	2.1	6.0	5	0	0	5	5	5	4	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675839|ref|YP_003727589.1|	-	1.3e-09	38.0	41.0	1.2e-05	25.3	17.0	4.1	3	1	1	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675839|ref|YP_003727589.1|	-	6.1e-09	35.9	52.4	0.00018	21.5	16.7	5.1	2	2	4	6	6	6	4	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298675839|ref|YP_003727589.1|	-	1.6e-06	28.5	29.8	0.00093	19.7	14.7	4.4	2	1	2	4	4	3	3	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298675839|ref|YP_003727589.1|	-	0.0007	20.4	49.9	0.029	15.3	2.3	6.5	6	0	0	6	6	6	4	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|298675839|ref|YP_003727589.1|	-	0.0021	18.8	32.2	0.0061	17.3	1.7	5.8	5	1	0	5	5	5	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|298675839|ref|YP_003727589.1|	-	0.0024	18.4	39.1	0.0036	17.8	1.9	5.7	4	2	2	6	6	6	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_8	PF13183.6	gi|298675839|ref|YP_003727589.1|	-	0.0051	17.2	44.5	0.038	14.5	2.5	4.6	2	2	4	6	6	6	5	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298675839|ref|YP_003727589.1|	-	0.052	14.1	53.4	0.053	14.0	1.0	6.2	7	0	0	7	7	6	0	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|298675839|ref|YP_003727589.1|	-	0.11	13.3	1.1	0.11	13.3	1.1	4.9	4	1	1	5	5	5	0	4Fe-4S	dicluster	domain
DUF3646	PF12362.8	gi|298675839|ref|YP_003727589.1|	-	0.32	11.3	0.0	0.32	11.3	0.0	1.7	2	0	0	2	2	2	0	DNA	polymerase	III	gamma	and	tau	subunits	C	terminal
Fer4_18	PF13746.6	gi|298675839|ref|YP_003727589.1|	-	9.5	6.5	34.1	1.3	9.2	2.8	4.0	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Rnf-Nqr	PF02508.14	gi|298675840|ref|YP_003727590.1|	-	4.2e-55	186.4	19.6	4.7e-55	186.2	19.6	1.0	1	0	0	1	1	1	1	Rnf-Nqr	subunit,	membrane	protein
7tm_7	PF08395.12	gi|298675840|ref|YP_003727590.1|	-	0.18	11.0	10.0	0.46	9.6	10.0	1.8	1	1	0	1	1	1	0	7tm	Chemosensory	receptor
DUF5079	PF16882.5	gi|298675840|ref|YP_003727590.1|	-	0.44	10.4	9.4	0.59	10.0	9.4	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5079)
Rnf-Nqr	PF02508.14	gi|298675841|ref|YP_003727591.1|	-	1e-59	201.4	15.0	1.2e-59	201.2	15.0	1.0	1	0	0	1	1	1	1	Rnf-Nqr	subunit,	membrane	protein
ECH_1	PF00378.20	gi|298675841|ref|YP_003727591.1|	-	0.095	12.0	0.0	0.15	11.3	0.0	1.3	1	0	0	1	1	1	0	Enoyl-CoA	hydratase/isomerase
FMN_bind	PF04205.14	gi|298675842|ref|YP_003727592.1|	-	4.2e-15	56.1	0.2	7.9e-15	55.2	0.2	1.5	1	0	0	1	1	1	1	FMN-binding	domain
UPF0259	PF06790.11	gi|298675842|ref|YP_003727592.1|	-	0.035	13.9	0.0	0.044	13.5	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0259)
NQR2_RnfD_RnfE	PF03116.15	gi|298675843|ref|YP_003727593.1|	-	1.1e-65	222.0	21.7	1.3e-65	221.7	21.7	1.1	1	0	0	1	1	1	1	NQR2,	RnfD,	RnfE	family
PAP2	PF01569.21	gi|298675843|ref|YP_003727593.1|	-	0.28	11.0	13.7	0.31	10.8	0.4	2.8	2	1	0	2	2	2	0	PAP2	superfamily
DUF872	PF05915.12	gi|298675843|ref|YP_003727593.1|	-	4.8	7.4	7.8	15	5.8	2.0	2.5	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
RnfC_N	PF13375.6	gi|298675844|ref|YP_003727594.1|	-	2.2e-23	82.1	0.8	2.2e-23	82.1	0.8	2.1	2	0	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
Complex1_51K	PF01512.17	gi|298675844|ref|YP_003727594.1|	-	1.5e-16	60.6	0.0	2.4e-16	59.9	0.0	1.3	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase	51	Kd	subunit
Fer4_7	PF12838.7	gi|298675844|ref|YP_003727594.1|	-	4.1e-08	33.7	8.6	1.1e-07	32.4	8.6	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298675844|ref|YP_003727594.1|	-	7.3e-08	32.3	10.1	0.0022	18.4	1.3	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298675844|ref|YP_003727594.1|	-	1e-07	31.7	12.5	0.00026	20.9	1.7	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298675844|ref|YP_003727594.1|	-	1.4e-07	31.5	12.4	1.2e-06	28.5	13.3	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675844|ref|YP_003727594.1|	-	1e-06	28.8	11.9	3.8e-06	27.0	12.2	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298675844|ref|YP_003727594.1|	-	1.9e-05	24.2	15.5	0.011	15.5	4.0	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
NQRA	PF05896.11	gi|298675844|ref|YP_003727594.1|	-	3.9e-05	23.2	0.0	5.6e-05	22.7	0.0	1.2	1	0	0	1	1	1	1	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
Fer4_2	PF12797.7	gi|298675844|ref|YP_003727594.1|	-	9.6e-05	22.3	14.3	0.013	15.5	3.6	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298675844|ref|YP_003727594.1|	-	0.00012	22.5	24.4	0.0024	18.3	3.3	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675844|ref|YP_003727594.1|	-	0.00017	22.4	13.5	0.066	14.2	3.9	2.7	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
SLBB	PF10531.9	gi|298675844|ref|YP_003727594.1|	-	0.00049	19.9	0.0	0.00098	19.0	0.0	1.6	1	0	0	1	1	1	1	SLBB	domain
Fer4_21	PF14697.6	gi|298675844|ref|YP_003727594.1|	-	0.0012	18.9	14.6	0.045	13.9	14.8	2.7	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298675844|ref|YP_003727594.1|	-	0.0017	18.9	15.7	0.027	15.0	14.6	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298675844|ref|YP_003727594.1|	-	0.0038	18.1	15.9	0.46	11.5	4.8	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|298675844|ref|YP_003727594.1|	-	0.0078	16.4	10.9	0.19	11.9	1.3	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298675844|ref|YP_003727594.1|	-	0.022	15.6	8.4	2.1	9.2	3.8	2.5	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298675844|ref|YP_003727594.1|	-	0.28	11.8	14.8	2.6	8.7	2.8	2.9	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Cytochrome_C7	PF14522.6	gi|298675845|ref|YP_003727595.1|	-	7.5e-06	25.9	33.2	0.0011	18.9	0.8	5.1	3	2	0	3	3	3	2	Cytochrome	c7	and	related	cytochrome	c
Cytochrom_c3_2	PF14537.6	gi|298675845|ref|YP_003727595.1|	-	0.0022	18.4	0.5	0.0022	18.4	0.5	5.1	3	2	1	4	4	4	1	Cytochrome	c3
EF-hand_5	PF13202.6	gi|298675845|ref|YP_003727595.1|	-	0.064	12.8	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	EF	hand
Cytochrom_NNT	PF03264.14	gi|298675845|ref|YP_003727595.1|	-	0.19	11.4	27.7	0.36	10.5	7.3	5.3	5	1	0	5	5	5	0	NapC/NirT	cytochrome	c	family,	N-terminal	region
ApbE	PF02424.15	gi|298675847|ref|YP_003727597.1|	-	4.4e-78	262.4	0.1	5.1e-78	262.2	0.1	1.0	1	0	0	1	1	1	1	ApbE	family
Cadherin_3	PF16184.5	gi|298675847|ref|YP_003727597.1|	-	0.22	11.6	4.3	0.55	10.2	1.0	2.5	2	0	0	2	2	2	0	Cadherin-like
LigT_PEase	PF02834.16	gi|298675848|ref|YP_003727598.1|	-	6.6e-27	93.5	0.0	8.3e-17	61.2	0.0	2.0	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.6	gi|298675848|ref|YP_003727598.1|	-	2e-11	44.0	0.0	2.3e-11	43.8	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.9	gi|298675848|ref|YP_003727598.1|	-	6.4e-07	29.5	0.1	8.2e-07	29.1	0.1	1.2	1	0	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
HVSL	PF09749.9	gi|298675848|ref|YP_003727598.1|	-	0.0022	17.5	0.1	0.0037	16.8	0.1	1.4	1	1	0	1	1	1	1	Uncharacterised	conserved	protein
AAA_25	PF13481.6	gi|298675848|ref|YP_003727598.1|	-	0.046	13.3	0.0	0.074	12.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DisA_N	PF02457.16	gi|298675849|ref|YP_003727599.1|	-	1.8e-21	75.9	1.7	5.4e-21	74.4	0.3	2.2	2	0	0	2	2	2	1	DisA	bacterial	checkpoint	controller	nucleotide-binding
YmgB	PF10798.8	gi|298675849|ref|YP_003727599.1|	-	0.89	9.4	4.9	0.49	10.3	0.1	2.9	4	0	0	4	4	4	0	Biofilm	development	protein	YmgB/AriR
FMN_red	PF03358.15	gi|298675850|ref|YP_003727600.1|	-	5.9e-14	52.1	0.0	8.7e-14	51.5	0.0	1.3	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
eRF1_1	PF03463.15	gi|298675851|ref|YP_003727601.1|	-	8.5e-26	90.5	1.2	1.3e-25	89.8	1.2	1.3	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_3	PF03465.15	gi|298675851|ref|YP_003727601.1|	-	4e-25	88.5	0.5	9.4e-25	87.3	0.5	1.7	1	0	0	1	1	1	1	eRF1	domain	3
eRF1_2	PF03464.15	gi|298675851|ref|YP_003727601.1|	-	1.5e-08	35.0	0.0	6.7e-07	29.7	0.0	2.5	1	1	0	1	1	1	1	eRF1	domain	2
FbpA	PF05833.11	gi|298675852|ref|YP_003727602.1|	-	1.7e-98	330.4	7.2	2.2e-98	330.0	7.2	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
NFACT-R_1	PF05670.13	gi|298675852|ref|YP_003727602.1|	-	2e-25	89.6	0.0	4.5e-25	88.4	0.0	1.7	1	0	0	1	1	1	1	NFACT	protein	RNA	binding	domain
DNA_primase_S	PF01896.19	gi|298675853|ref|YP_003727603.1|	-	8.9e-20	71.5	0.0	2.8e-19	69.8	0.0	1.8	1	1	0	1	1	1	1	DNA	primase	small	subunit
HHH_5	PF14520.6	gi|298675853|ref|YP_003727603.1|	-	0.016	15.8	0.1	1.8	9.2	0.0	2.5	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
Zip	PF02535.22	gi|298675854|ref|YP_003727604.1|	-	1.6	7.9	3.1	2	7.5	3.1	1.2	1	0	0	1	1	1	0	ZIP	Zinc	transporter
Presenilin	PF01080.17	gi|298675854|ref|YP_003727604.1|	-	2	7.1	5.0	2.3	6.9	5.0	1.2	1	0	0	1	1	1	0	Presenilin
EST1	PF10374.9	gi|298675854|ref|YP_003727604.1|	-	2.9	8.5	10.0	18	6.0	10.0	2.3	1	1	0	1	1	1	0	Telomerase	activating	protein	Est1
Ribosomal_L44	PF00935.19	gi|298675855|ref|YP_003727605.1|	-	5.4e-25	87.7	11.0	7.9e-25	87.1	11.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L44
RNHCP	PF12647.7	gi|298675855|ref|YP_003727605.1|	-	0.046	13.7	5.7	0.88	9.6	1.3	2.1	1	1	1	2	2	2	0	RNHCP	domain
Zn_Tnp_IS1595	PF12760.7	gi|298675855|ref|YP_003727605.1|	-	0.071	13.1	1.8	3.1	7.8	0.1	2.3	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-Mss51	PF13824.6	gi|298675855|ref|YP_003727605.1|	-	2.6	8.2	6.3	20	5.4	6.4	2.0	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Ribosomal_S27e	PF01667.17	gi|298675856|ref|YP_003727606.1|	-	3.8e-25	87.4	0.7	4.1e-25	87.2	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S27
zf-C2H2_12	PF18658.1	gi|298675856|ref|YP_003727606.1|	-	0.0031	17.1	0.1	0.0051	16.4	0.0	1.4	1	1	0	1	1	1	1	Zinc-finger	C2H2-type
TF_Zn_Ribbon	PF08271.12	gi|298675856|ref|YP_003727606.1|	-	0.0044	16.5	1.4	0.0056	16.2	1.4	1.2	1	0	0	1	1	1	1	TFIIB	zinc-binding
Zn_Tnp_IS91	PF14319.6	gi|298675856|ref|YP_003727606.1|	-	0.0047	16.9	0.2	0.0049	16.9	0.2	1.1	1	0	0	1	1	1	1	Transposase	zinc-binding	domain
HypA	PF01155.19	gi|298675856|ref|YP_003727606.1|	-	0.013	15.5	0.4	0.014	15.4	0.4	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Stc1	PF12898.7	gi|298675856|ref|YP_003727606.1|	-	0.051	14.1	1.4	0.07	13.7	1.4	1.3	1	1	0	1	1	1	0	Stc1	domain
zf-BED	PF02892.15	gi|298675856|ref|YP_003727606.1|	-	0.066	13.2	0.9	0.81	9.8	0.1	2.1	2	0	0	2	2	2	0	BED	zinc	finger
zf-trcl	PF13451.6	gi|298675856|ref|YP_003727606.1|	-	0.072	13.0	1.0	4.4	7.3	0.1	2.1	2	0	0	2	2	2	0	Probable	zinc-ribbon	domain
zinc_ribbon_6	PF14599.6	gi|298675856|ref|YP_003727606.1|	-	0.08	13.0	2.8	0.34	10.9	2.6	2.0	2	1	1	3	3	3	0	Zinc-ribbon
Sgf11	PF08209.11	gi|298675856|ref|YP_003727606.1|	-	0.32	10.6	0.1	0.32	10.6	0.1	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
EIF_2_alpha	PF07541.12	gi|298675857|ref|YP_003727607.1|	-	5e-27	94.3	0.2	9.2e-27	93.5	0.2	1.4	1	0	0	1	1	1	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.23	gi|298675857|ref|YP_003727607.1|	-	1.2e-13	51.2	0.3	5.1e-13	49.2	0.3	1.9	2	0	0	2	2	2	1	S1	RNA	binding	domain
PI_PP_C	PF18365.1	gi|298675857|ref|YP_003727607.1|	-	0.041	13.9	0.0	0.12	12.4	0.0	1.7	1	0	0	1	1	1	0	Phosphoinositide	phosphatase	C-terminal	domain
Dodecin	PF07311.12	gi|298675857|ref|YP_003727607.1|	-	0.087	13.1	1.3	2	8.8	0.1	3.1	3	0	0	3	3	3	0	Dodecin
3HCDH_N	PF02737.18	gi|298675857|ref|YP_003727607.1|	-	0.35	10.7	1.5	0.95	9.3	0.6	2.0	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Nop10p	PF04135.12	gi|298675858|ref|YP_003727608.1|	-	2.7e-25	88.1	3.8	3.1e-25	88.0	3.8	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF1272	PF06906.11	gi|298675858|ref|YP_003727608.1|	-	0.00052	20.0	1.3	0.00063	19.8	1.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1272)
RecR	PF02132.15	gi|298675858|ref|YP_003727608.1|	-	0.001	18.6	0.8	0.0013	18.2	0.8	1.2	1	0	0	1	1	1	1	RecR	protein
PolC_DP2	PF03833.13	gi|298675858|ref|YP_003727608.1|	-	0.0043	15.0	0.4	0.0043	15.0	0.4	1.0	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
NRDD	PF13597.6	gi|298675858|ref|YP_003727608.1|	-	0.11	11.3	0.6	0.087	11.6	0.6	1.0	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
HypA	PF01155.19	gi|298675858|ref|YP_003727608.1|	-	0.17	11.9	1.8	0.22	11.6	1.8	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DUF35_N	PF12172.8	gi|298675858|ref|YP_003727608.1|	-	0.28	11.1	3.3	0.54	10.2	3.3	1.5	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
PAC2	PF09754.9	gi|298675859|ref|YP_003727609.1|	-	1.2e-51	175.8	0.0	1.3e-51	175.6	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
Gp_dh_N	PF00044.24	gi|298675859|ref|YP_003727609.1|	-	0.071	13.5	0.8	0.65	10.4	0.0	2.3	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Glu-tRNAGln	PF02686.15	gi|298675859|ref|YP_003727609.1|	-	1.1	9.7	3.7	1.3	9.4	2.5	1.8	2	0	0	2	2	2	0	Glu-tRNAGln	amidotransferase	C	subunit
PHP	PF02811.19	gi|298675860|ref|YP_003727610.1|	-	0.0069	16.7	0.1	0.0081	16.5	0.1	1.5	1	1	0	1	1	1	1	PHP	domain
PHP_C	PF13263.6	gi|298675860|ref|YP_003727610.1|	-	0.0085	15.8	0.0	0.021	14.6	0.0	1.7	1	0	0	1	1	1	1	PHP-associated
Methyltr_RsmB-F	PF01189.17	gi|298675861|ref|YP_003727611.1|	-	1.9e-55	187.6	0.0	2.5e-55	187.3	0.0	1.1	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltr_RsmF_N	PF17125.5	gi|298675861|ref|YP_003727611.1|	-	2.3e-08	34.4	0.0	8e-08	32.7	0.0	1.9	2	0	0	2	2	2	1	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
FtsJ	PF01728.19	gi|298675861|ref|YP_003727611.1|	-	1.5e-07	31.7	0.0	5e-07	30.0	0.0	1.8	2	0	0	2	2	2	1	FtsJ-like	methyltransferase
Methyltransf_31	PF13847.6	gi|298675861|ref|YP_003727611.1|	-	6.9e-07	29.2	0.1	2e-06	27.7	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298675861|ref|YP_003727611.1|	-	0.00013	21.4	0.0	0.0058	16.0	0.0	2.2	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
PCMT	PF01135.19	gi|298675861|ref|YP_003727611.1|	-	0.00062	19.6	0.0	0.0015	18.4	0.0	1.6	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Met_10	PF02475.16	gi|298675861|ref|YP_003727611.1|	-	0.03	14.1	0.0	0.058	13.1	0.0	1.4	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_11	PF08241.12	gi|298675861|ref|YP_003727611.1|	-	0.032	14.9	0.0	0.31	11.7	0.0	2.2	1	1	0	1	1	1	0	Methyltransferase	domain
DUF2431	PF10354.9	gi|298675861|ref|YP_003727611.1|	-	0.056	13.7	0.0	0.09	13.0	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2431)
Methyltransf_4	PF02390.17	gi|298675861|ref|YP_003727611.1|	-	0.11	12.0	0.0	0.26	10.7	0.0	1.6	2	0	0	2	2	2	0	Putative	methyltransferase
Methyltranf_PUA	PF13636.6	gi|298675862|ref|YP_003727612.1|	-	0.00015	21.6	0.9	0.00031	20.7	0.4	1.9	2	0	0	2	2	2	1	RNA-binding	PUA-like	domain	of	methyltransferase	RsmF
LGT	PF01790.18	gi|298675863|ref|YP_003727613.1|	-	0.00073	18.8	1.1	0.00096	18.4	1.1	1.1	1	0	0	1	1	1	1	Prolipoprotein	diacylglyceryl	transferase
mRNA_triPase	PF02940.15	gi|298675863|ref|YP_003727613.1|	-	0.026	14.2	0.0	4.4	7.0	0.0	2.3	2	0	0	2	2	2	0	mRNA	capping	enzyme,	beta	chain
COX15-CtaA	PF02628.15	gi|298675863|ref|YP_003727613.1|	-	0.032	13.3	2.8	0.046	12.8	2.8	1.1	1	0	0	1	1	1	0	Cytochrome	oxidase	assembly	protein
MapZ_C2	PF18708.1	gi|298675863|ref|YP_003727613.1|	-	0.038	14.3	0.7	0.1	12.9	0.7	1.7	1	0	0	1	1	1	0	MapZ	extracellular	C-terminal	domain	2
Wzy_C	PF04932.15	gi|298675863|ref|YP_003727613.1|	-	0.058	13.0	2.1	0.13	11.9	2.1	1.6	1	1	0	1	1	1	0	O-Antigen	ligase
Peptidase_U4	PF03419.13	gi|298675863|ref|YP_003727613.1|	-	0.058	12.7	0.3	0.081	12.2	0.3	1.2	1	0	0	1	1	1	0	Sporulation	factor	SpoIIGA
DUF4022	PF13214.6	gi|298675863|ref|YP_003727613.1|	-	0.21	11.9	2.7	0.43	10.9	2.7	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4022)
DUF4118	PF13493.6	gi|298675863|ref|YP_003727613.1|	-	1.1	9.0	5.1	1.8	8.4	5.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4118)
MacB_PCD	PF12704.7	gi|298675864|ref|YP_003727614.1|	-	9.6e-26	91.3	0.3	9.6e-26	91.3	0.3	2.4	2	1	1	3	3	3	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.21	gi|298675864|ref|YP_003727614.1|	-	3.8e-13	49.7	15.2	4.3e-13	49.5	2.5	3.2	3	0	0	3	3	3	2	FtsX-like	permease	family
DUF2543	PF10820.8	gi|298675864|ref|YP_003727614.1|	-	0.096	12.9	0.0	0.23	11.7	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2543)
Jiraiya	PF15038.6	gi|298675864|ref|YP_003727614.1|	-	0.17	11.3	3.3	0.55	9.6	0.0	2.7	3	0	0	3	3	3	0	Jiraiya
DUF3042	PF11240.8	gi|298675864|ref|YP_003727614.1|	-	3	7.9	6.1	4.9	7.3	0.4	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3042)
MacB_PCD	PF12704.7	gi|298675865|ref|YP_003727615.1|	-	1.1e-26	94.4	3.7	1.1e-26	94.4	3.7	1.8	2	1	0	2	2	2	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.21	gi|298675865|ref|YP_003727615.1|	-	1.8e-11	44.3	4.0	1.8e-11	44.3	4.0	3.1	3	0	0	3	3	3	2	FtsX-like	permease	family
DUF525	PF04379.14	gi|298675865|ref|YP_003727615.1|	-	0.12	12.6	0.1	0.24	11.7	0.1	1.4	1	0	0	1	1	1	0	ApaG	domain
Rhomboid	PF01694.22	gi|298675865|ref|YP_003727615.1|	-	7	6.6	14.2	13	5.8	11.7	2.5	2	1	0	2	2	2	0	Rhomboid	family
Gram_pos_anchor	PF00746.21	gi|298675866|ref|YP_003727616.1|	-	0.0053	16.7	1.0	0.0079	16.1	0.1	1.7	2	0	0	2	2	2	1	LPXTG	cell	wall	anchor	motif
CARDB	PF07705.11	gi|298675866|ref|YP_003727616.1|	-	0.0056	16.9	0.5	11	6.3	0.0	3.8	2	2	2	4	4	4	2	CARDB
DUF11	PF01345.18	gi|298675866|ref|YP_003727616.1|	-	0.04	14.2	0.0	11	6.4	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF11
FeoB_associated	PF12669.7	gi|298675866|ref|YP_003727616.1|	-	0.054	13.9	0.3	0.095	13.1	0.3	1.4	1	0	0	1	1	1	0	FeoB-associated	Cys-rich	membrane	protein
ABC_tran	PF00005.27	gi|298675867|ref|YP_003727617.1|	-	1.1e-33	116.6	0.0	1.5e-33	116.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|298675867|ref|YP_003727617.1|	-	1.7e-07	30.9	0.2	9.7e-07	28.4	0.2	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|298675867|ref|YP_003727617.1|	-	1.9e-07	31.2	0.0	0.0095	15.8	0.0	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|298675867|ref|YP_003727617.1|	-	0.00017	21.2	0.1	0.00032	20.4	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|298675867|ref|YP_003727617.1|	-	0.00042	20.3	0.0	0.00081	19.3	0.0	1.5	1	0	0	1	1	1	1	RsgA	GTPase
AAA_23	PF13476.6	gi|298675867|ref|YP_003727617.1|	-	0.0043	17.6	0.1	0.007	16.9	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|298675867|ref|YP_003727617.1|	-	0.0045	17.3	0.3	0.039	14.2	0.0	2.2	3	0	0	3	3	2	1	AAA	domain
AAA_16	PF13191.6	gi|298675867|ref|YP_003727617.1|	-	0.0054	17.1	0.0	0.0059	17.0	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
G-alpha	PF00503.20	gi|298675867|ref|YP_003727617.1|	-	0.0058	15.8	0.0	0.0075	15.5	0.0	1.1	1	0	0	1	1	1	1	G-protein	alpha	subunit
NB-ARC	PF00931.22	gi|298675867|ref|YP_003727617.1|	-	0.03	13.5	0.2	0.15	11.2	0.1	1.9	2	0	0	2	2	2	0	NB-ARC	domain
MMR_HSR1	PF01926.23	gi|298675867|ref|YP_003727617.1|	-	0.034	14.2	0.1	0.087	12.9	0.0	1.7	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
ATPase_2	PF01637.18	gi|298675867|ref|YP_003727617.1|	-	0.034	14.0	0.0	0.15	11.9	0.0	1.9	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
AAA_24	PF13479.6	gi|298675867|ref|YP_003727617.1|	-	0.037	13.7	0.0	0.24	11.1	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_15	PF13175.6	gi|298675867|ref|YP_003727617.1|	-	0.04	13.6	0.0	0.28	10.8	0.0	1.9	1	1	0	2	2	2	0	AAA	ATPase	domain
T4SS-DNA_transf	PF02534.14	gi|298675867|ref|YP_003727617.1|	-	0.042	12.6	0.0	0.63	8.8	0.0	2.0	2	0	0	2	2	2	0	Type	IV	secretory	system	Conjugative	DNA	transfer
T2SSE	PF00437.20	gi|298675867|ref|YP_003727617.1|	-	0.058	12.4	0.0	0.1	11.7	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_33	PF13671.6	gi|298675867|ref|YP_003727617.1|	-	0.092	12.9	0.1	1	9.5	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.6	gi|298675867|ref|YP_003727617.1|	-	0.094	13.3	0.2	0.17	12.4	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|298675867|ref|YP_003727617.1|	-	0.098	12.4	0.0	0.75	9.5	0.0	2.0	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
RNA12	PF10443.9	gi|298675867|ref|YP_003727617.1|	-	0.099	11.4	0.0	0.24	10.1	0.0	1.5	1	1	1	2	2	2	0	RNA12	protein
AAA_30	PF13604.6	gi|298675867|ref|YP_003727617.1|	-	0.11	12.2	0.0	0.35	10.6	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
Cytidylate_kin	PF02224.18	gi|298675867|ref|YP_003727617.1|	-	0.15	11.8	0.4	0.33	10.6	0.1	1.7	2	0	0	2	2	2	0	Cytidylate	kinase
AAA_25	PF13481.6	gi|298675867|ref|YP_003727617.1|	-	0.15	11.6	0.0	0.37	10.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.15	gi|298675867|ref|YP_003727617.1|	-	0.15	11.9	0.2	6.1	6.7	0.0	2.4	2	0	0	2	2	2	0	NTPase
MarR_2	PF12802.7	gi|298675868|ref|YP_003727618.1|	-	0.0014	18.5	0.0	0.0021	17.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.6	gi|298675868|ref|YP_003727618.1|	-	0.0017	18.5	0.0	0.0032	17.6	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.22	gi|298675868|ref|YP_003727618.1|	-	0.0044	16.9	0.0	0.0091	15.9	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|298675868|ref|YP_003727618.1|	-	0.012	15.1	0.0	0.025	14.1	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.12	gi|298675868|ref|YP_003727618.1|	-	0.014	15.3	0.0	0.04	13.9	0.0	1.8	1	0	0	1	1	1	0	HTH	domain
YbbR	PF07949.12	gi|298675868|ref|YP_003727618.1|	-	0.021	15.2	1.6	0.03	14.7	0.4	2.0	2	1	0	2	2	2	0	YbbR-like	protein
FUR	PF01475.19	gi|298675868|ref|YP_003727618.1|	-	0.025	14.7	0.3	0.14	12.3	0.0	1.9	1	1	1	2	2	2	0	Ferric	uptake	regulator	family
AAA_23	PF13476.6	gi|298675868|ref|YP_003727618.1|	-	0.026	15.0	1.1	0.029	14.9	1.1	1.1	1	0	0	1	1	1	0	AAA	domain
HTH_CodY	PF08222.11	gi|298675868|ref|YP_003727618.1|	-	0.034	13.7	0.1	0.067	12.7	0.1	1.5	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
CtsR	PF05848.11	gi|298675868|ref|YP_003727618.1|	-	0.041	13.8	0.3	6.3	6.8	0.0	2.8	2	1	1	3	3	3	0	CtsR	N-terminal	HTH	domain
DprA_WH	PF17782.1	gi|298675868|ref|YP_003727618.1|	-	0.062	13.4	0.0	0.12	12.5	0.0	1.4	1	0	0	1	1	1	0	DprA	winged	helix	domain
UPF0051	PF01458.17	gi|298675869|ref|YP_003727619.1|	-	7.3e-57	192.6	0.1	1.1e-56	192.0	0.1	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.27	gi|298675870|ref|YP_003727620.1|	-	1.6e-20	74.0	0.0	2.5e-20	73.4	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675870|ref|YP_003727620.1|	-	5.1e-08	33.1	0.3	6e-06	26.3	0.2	2.2	1	1	1	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|298675870|ref|YP_003727620.1|	-	3.2e-06	26.8	0.3	0.0012	18.3	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|298675870|ref|YP_003727620.1|	-	2.8e-05	24.7	0.2	5.9e-05	23.7	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|298675870|ref|YP_003727620.1|	-	0.0012	18.6	0.0	0.0035	17.1	0.0	1.6	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|298675870|ref|YP_003727620.1|	-	0.0014	18.4	0.1	0.0044	16.7	0.0	1.8	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.6	gi|298675870|ref|YP_003727620.1|	-	0.0035	16.1	0.2	0.006	15.3	0.2	1.3	1	0	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|298675870|ref|YP_003727620.1|	-	0.02	14.8	0.1	0.41	10.5	0.0	2.6	3	0	0	3	3	3	0	RsgA	GTPase
AAA_18	PF13238.6	gi|298675870|ref|YP_003727620.1|	-	0.026	15.1	0.1	3.1	8.3	0.1	2.3	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|298675870|ref|YP_003727620.1|	-	0.03	14.7	0.3	0.32	11.4	0.3	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|298675870|ref|YP_003727620.1|	-	0.036	14.0	0.1	0.067	13.1	0.0	1.6	2	1	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
AAA_16	PF13191.6	gi|298675870|ref|YP_003727620.1|	-	0.21	12.0	0.0	0.5	10.7	0.0	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
DUF2769	PF10967.8	gi|298675871|ref|YP_003727621.1|	-	3.9e-14	53.1	13.6	8.9e-14	51.9	11.1	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2769)
Hydant_A_N	PF05378.13	gi|298675872|ref|YP_003727622.1|	-	1.1e-32	113.2	0.8	4.8e-28	98.1	0.1	3.4	2	1	0	2	2	2	2	Hydantoinase/oxoprolinase	N-terminal	region
Hydantoinase_A	PF01968.18	gi|298675872|ref|YP_003727622.1|	-	4e-29	101.8	1.2	2e-28	99.5	0.3	2.4	3	0	0	3	3	3	1	Hydantoinase/oxoprolinase
MutL	PF13941.6	gi|298675872|ref|YP_003727622.1|	-	1.9e-07	30.1	0.5	0.0015	17.2	0.1	2.2	2	0	0	2	2	2	2	MutL	protein
BcrAD_BadFG	PF01869.20	gi|298675872|ref|YP_003727622.1|	-	0.0022	17.5	0.0	0.056	12.9	0.0	2.3	2	0	0	2	2	2	1	BadF/BadG/BcrA/BcrD	ATPase	family
FtsA	PF14450.6	gi|298675872|ref|YP_003727622.1|	-	0.072	13.5	1.1	5.5	7.5	0.1	2.5	2	0	0	2	2	2	0	Cell	division	protein	FtsA
Ribosomal_L18_c	PF14204.6	gi|298675872|ref|YP_003727622.1|	-	0.41	11.6	1.8	14	6.7	0.2	2.6	2	0	0	2	2	2	0	Ribosomal	L18	C-terminal	region
Zn-ribbon_8	PF09723.10	gi|298675873|ref|YP_003727623.1|	-	0.00044	20.3	1.6	0.00057	19.9	1.6	1.1	1	0	0	1	1	1	1	Zinc	ribbon	domain
zf-C2HC5	PF06221.13	gi|298675873|ref|YP_003727623.1|	-	0.017	15.1	3.0	0.024	14.6	3.0	1.2	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
Zn_ribbon_2	PF12674.7	gi|298675873|ref|YP_003727623.1|	-	0.026	15.2	1.6	0.52	11.0	0.4	2.0	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
ADK_lid	PF05191.14	gi|298675873|ref|YP_003727623.1|	-	0.16	12.0	3.0	0.3	11.1	3.0	1.5	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
C1_2	PF03107.16	gi|298675873|ref|YP_003727623.1|	-	0.37	11.1	4.7	7.2	7.0	1.2	2.1	1	1	0	2	2	2	0	C1	domain
zf_C2H2_13	PF18508.1	gi|298675873|ref|YP_003727623.1|	-	0.67	9.6	8.7	0.45	10.1	3.1	2.1	1	1	1	2	2	2	0	Zinc	finger	domain
ADD_DNMT3	PF17980.1	gi|298675873|ref|YP_003727623.1|	-	1.6	8.8	8.4	7.3	6.7	2.1	2.2	1	1	1	2	2	2	0	Cysteine	rich	ADD	domain	in	DNMT3
zf_UBZ	PF18439.1	gi|298675873|ref|YP_003727623.1|	-	1.6	8.4	6.0	1.8	8.2	0.1	2.1	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
AAA_18	PF13238.6	gi|298675875|ref|YP_003727625.1|	-	1.2e-23	84.1	0.7	1.7e-23	83.6	0.7	1.3	1	0	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|298675875|ref|YP_003727625.1|	-	1.2e-06	28.5	1.1	0.013	15.4	0.1	2.2	1	1	1	2	2	2	2	Deoxynucleoside	kinase
AAA_33	PF13671.6	gi|298675875|ref|YP_003727625.1|	-	3e-06	27.5	0.0	0.0038	17.4	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
AAA_28	PF13521.6	gi|298675875|ref|YP_003727625.1|	-	8.8e-05	22.8	0.0	0.00013	22.2	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|298675875|ref|YP_003727625.1|	-	9.1e-05	22.9	0.1	0.0012	19.3	0.1	2.2	1	1	0	1	1	1	1	AAA	domain
CoaE	PF01121.20	gi|298675875|ref|YP_003727625.1|	-	0.00018	21.2	0.1	0.0098	15.6	0.0	2.4	1	1	0	2	2	2	1	Dephospho-CoA	kinase
AAA	PF00004.29	gi|298675875|ref|YP_003727625.1|	-	0.0071	16.8	0.4	0.022	15.2	0.4	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
APS_kinase	PF01583.20	gi|298675875|ref|YP_003727625.1|	-	0.0089	15.9	0.0	0.012	15.5	0.0	1.3	1	0	0	1	1	1	1	Adenylylsulphate	kinase
Zeta_toxin	PF06414.12	gi|298675875|ref|YP_003727625.1|	-	0.011	15.0	0.0	0.018	14.4	0.0	1.7	1	1	0	1	1	1	0	Zeta	toxin
NikR_C	PF08753.11	gi|298675875|ref|YP_003727625.1|	-	0.016	15.3	0.1	0.034	14.3	0.1	1.5	1	0	0	1	1	1	0	NikR	C	terminal	nickel	binding	domain
AAA_22	PF13401.6	gi|298675875|ref|YP_003727625.1|	-	0.018	15.3	0.1	0.032	14.5	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
MeaB	PF03308.16	gi|298675875|ref|YP_003727625.1|	-	0.019	14.0	0.2	0.067	12.2	0.1	1.8	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Cytidylate_kin	PF02224.18	gi|298675875|ref|YP_003727625.1|	-	0.025	14.3	0.2	0.062	13.0	0.2	1.8	1	1	0	1	1	1	0	Cytidylate	kinase
KTI12	PF08433.10	gi|298675875|ref|YP_003727625.1|	-	0.028	13.9	0.4	0.075	12.5	0.1	1.8	1	1	1	2	2	2	0	Chromatin	associated	protein	KTI12
Seryl_tRNA_N	PF02403.22	gi|298675875|ref|YP_003727625.1|	-	0.038	14.2	2.7	4.4	7.6	0.1	2.6	2	1	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
RNA_helicase	PF00910.22	gi|298675875|ref|YP_003727625.1|	-	0.058	13.8	0.1	0.11	12.9	0.1	1.7	1	1	0	1	1	1	0	RNA	helicase
PRK	PF00485.18	gi|298675875|ref|YP_003727625.1|	-	0.059	13.1	0.0	0.45	10.2	0.0	2.1	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
ATPase	PF06745.13	gi|298675875|ref|YP_003727625.1|	-	0.064	12.6	4.2	0.88	8.9	0.1	2.6	1	1	0	2	2	2	0	KaiC
MMR_HSR1	PF01926.23	gi|298675875|ref|YP_003727625.1|	-	0.067	13.3	0.9	0.12	12.5	0.7	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
ADK	PF00406.22	gi|298675875|ref|YP_003727625.1|	-	0.071	13.2	0.2	6.6	6.8	0.0	2.7	1	1	1	2	2	2	0	Adenylate	kinase
Ploopntkinase3	PF18751.1	gi|298675875|ref|YP_003727625.1|	-	0.15	11.9	0.0	0.72	9.7	0.0	1.9	1	1	1	2	2	2	0	P-loop	Nucleotide	Kinase3
ABC_tran	PF00005.27	gi|298675875|ref|YP_003727625.1|	-	0.27	11.7	2.8	0.39	11.2	2.3	1.5	1	1	0	1	1	1	0	ABC	transporter
GATase	PF00117.28	gi|298675876|ref|YP_003727626.1|	-	2.9e-43	147.8	0.0	3.3e-43	147.7	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|298675876|ref|YP_003727626.1|	-	1.5e-17	64.1	0.2	2.6e-17	63.3	0.2	1.5	1	1	0	1	1	1	1	Peptidase	C26
DJ-1_PfpI	PF01965.24	gi|298675876|ref|YP_003727626.1|	-	0.15	11.8	0.0	0.22	11.3	0.0	1.2	1	0	0	1	1	1	0	DJ-1/PfpI	family
Chorismate_bind	PF00425.18	gi|298675877|ref|YP_003727627.1|	-	3.9e-95	318.3	0.0	3.2e-92	308.7	0.0	3.0	3	0	0	3	3	3	2	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.13	gi|298675877|ref|YP_003727627.1|	-	5.2e-25	88.3	1.6	6.2e-23	81.6	0.1	3.3	2	1	0	2	2	2	2	Anthranilate	synthase	component	I,	N	terminal	region
PRAI	PF00697.22	gi|298675878|ref|YP_003727628.1|	-	1.3e-32	113.1	1.1	2.6e-32	112.2	1.1	1.4	1	1	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
TMP-TENI	PF02581.17	gi|298675878|ref|YP_003727628.1|	-	0.0004	19.8	0.1	0.00092	18.6	0.0	1.6	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase
His_biosynth	PF00977.21	gi|298675878|ref|YP_003727628.1|	-	0.00083	18.9	0.1	0.0016	18.0	0.0	1.6	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.18	gi|298675878|ref|YP_003727628.1|	-	0.0072	15.4	0.0	0.33	9.9	0.0	2.0	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
Glycos_transf_3	PF00591.21	gi|298675879|ref|YP_003727629.1|	-	1.2e-97	326.4	1.1	1.6e-97	326.0	1.1	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.17	gi|298675879|ref|YP_003727629.1|	-	5.9e-17	61.3	1.7	2.5e-16	59.3	0.8	2.3	2	0	0	2	2	2	1	Glycosyl	transferase	family,	helical	bundle	domain
Fer4_13	PF13370.6	gi|298675880|ref|YP_003727630.1|	-	5.4e-18	65.3	3.2	6.4e-18	65.1	3.2	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|298675880|ref|YP_003727630.1|	-	1e-06	29.3	1.0	1.6e-06	28.7	1.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.6	gi|298675880|ref|YP_003727630.1|	-	0.00066	19.9	3.0	0.01	16.0	0.2	2.0	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298675880|ref|YP_003727630.1|	-	0.0011	19.1	5.4	0.039	14.1	1.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298675880|ref|YP_003727630.1|	-	0.0032	17.2	5.6	0.16	11.9	1.1	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298675880|ref|YP_003727630.1|	-	0.029	15.0	4.7	0.1	13.2	4.7	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675880|ref|YP_003727630.1|	-	0.039	14.1	3.1	0.33	11.1	0.4	1.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675880|ref|YP_003727630.1|	-	0.046	13.8	3.2	0.12	12.5	3.4	1.6	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_19	PF06902.11	gi|298675880|ref|YP_003727630.1|	-	0.07	13.2	1.9	0.086	12.9	1.9	1.3	1	1	0	1	1	1	0	Divergent	4Fe-4S	mono-cluster
AIRS	PF00586.24	gi|298675881|ref|YP_003727631.1|	-	1.2e-21	77.1	0.7	2.7e-21	76.0	0.7	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.22	gi|298675881|ref|YP_003727631.1|	-	3.5e-10	40.2	0.0	6.5e-10	39.3	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
S-layer	PF07752.11	gi|298675882|ref|YP_003727632.1|	-	9.8e-194	640.9	41.5	3e-98	328.0	16.1	3.2	3	0	0	3	3	3	2	S-layer	protein
PEGA	PF08308.11	gi|298675882|ref|YP_003727632.1|	-	2.7e-09	36.8	8.3	0.0005	19.9	0.1	4.0	3	0	0	3	3	3	2	PEGA	domain
CarboxypepD_reg	PF13620.6	gi|298675882|ref|YP_003727632.1|	-	1.4e-08	34.9	8.1	0.00079	19.7	0.7	4.2	2	1	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
fn3	PF00041.21	gi|298675882|ref|YP_003727632.1|	-	3e-07	30.7	3.6	0.0022	18.3	0.2	3.2	2	0	0	2	2	2	2	Fibronectin	type	III	domain
CarbopepD_reg_2	PF13715.6	gi|298675882|ref|YP_003727632.1|	-	5.9e-07	29.4	13.0	0.00016	21.6	0.2	4.6	4	0	0	4	4	4	2	CarboxypepD_reg-like	domain
Pur_ac_phosph_N	PF16656.5	gi|298675882|ref|YP_003727632.1|	-	1.4e-06	28.8	12.6	0.014	15.9	2.0	4.2	3	0	0	3	3	3	2	Purple	acid	Phosphatase,	N-terminal	domain
DUF2369	PF10179.9	gi|298675882|ref|YP_003727632.1|	-	6e-05	23.4	1.1	4	7.9	0.2	4.0	4	0	0	4	4	4	2	Uncharacterised	conserved	protein	(DUF2369)
PapC_N	PF13954.6	gi|298675882|ref|YP_003727632.1|	-	0.0017	18.4	2.4	0.025	14.6	0.1	3.1	3	0	0	3	3	2	1	PapC	N-terminal	domain
Ig_3	PF13927.6	gi|298675882|ref|YP_003727632.1|	-	0.011	16.3	8.0	34	5.1	0.0	5.1	4	0	0	4	4	4	0	Immunoglobulin	domain
DUF4198	PF10670.9	gi|298675882|ref|YP_003727632.1|	-	0.017	15.5	5.3	0.68	10.3	0.1	4.2	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4198)
DUF4307	PF14155.6	gi|298675882|ref|YP_003727632.1|	-	0.073	12.9	3.8	2.5	8.0	0.0	3.4	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4307)
CBM60	PF16841.5	gi|298675882|ref|YP_003727632.1|	-	0.16	12.4	6.7	18	5.8	0.2	4.6	3	0	0	3	3	3	0	Ca-dependent	carbohydrate-binding	module	xylan-binding
Hemocyanin_M	PF00372.19	gi|298675882|ref|YP_003727632.1|	-	0.17	11.0	6.5	0.21	10.7	0.3	3.0	3	0	0	3	3	3	0	Hemocyanin,	copper	containing	domain
YtkA	PF13115.6	gi|298675882|ref|YP_003727632.1|	-	0.22	12.1	10.8	3.3	8.4	0.1	5.7	6	0	0	6	6	6	0	YtkA-like
PrcB_C	PF14343.6	gi|298675882|ref|YP_003727632.1|	-	0.96	9.6	14.6	51	4.1	0.1	6.2	5	1	1	6	6	6	0	PrcB	C-terminal
HTH_3	PF01381.22	gi|298675883|ref|YP_003727633.1|	-	1.2e-08	34.9	0.0	3e-08	33.6	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|298675883|ref|YP_003727633.1|	-	0.00028	20.9	0.1	0.0054	16.7	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
PrpR_N	PF06506.11	gi|298675883|ref|YP_003727633.1|	-	0.00042	19.9	1.1	0.00069	19.2	1.1	1.3	1	0	0	1	1	1	1	Propionate	catabolism	activator
HTH_31	PF13560.6	gi|298675883|ref|YP_003727633.1|	-	0.0078	16.5	0.0	0.013	15.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MerR	PF00376.23	gi|298675883|ref|YP_003727633.1|	-	0.079	12.8	0.0	0.2	11.5	0.0	1.7	1	0	0	1	1	1	0	MerR	family	regulatory	protein
HTH_26	PF13443.6	gi|298675883|ref|YP_003727633.1|	-	0.13	12.7	0.0	0.25	11.8	0.0	1.5	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
NMT1_2	PF13379.6	gi|298675884|ref|YP_003727634.1|	-	1.3e-40	139.7	0.0	1.8e-40	139.3	0.0	1.1	1	0	0	1	1	1	1	NMT1-like	family
NMT1	PF09084.11	gi|298675884|ref|YP_003727634.1|	-	1.5e-13	51.2	0.0	2.1e-13	50.7	0.0	1.2	1	0	0	1	1	1	1	NMT1/THI5	like
Phosphonate-bd	PF12974.7	gi|298675884|ref|YP_003727634.1|	-	4.9e-06	26.3	0.0	7.1e-06	25.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
NMT1_3	PF16868.5	gi|298675884|ref|YP_003727634.1|	-	0.0046	16.4	0.0	0.066	12.6	0.0	2.1	1	1	1	2	2	2	1	NMT1-like	family
VitK2_biosynth	PF02621.14	gi|298675884|ref|YP_003727634.1|	-	0.014	15.0	0.0	0.021	14.4	0.0	1.2	1	0	0	1	1	1	0	Menaquinone	biosynthesis
LysR_substrate	PF03466.20	gi|298675884|ref|YP_003727634.1|	-	0.053	12.9	0.0	0.089	12.1	0.0	1.3	1	0	0	1	1	1	0	LysR	substrate	binding	domain
PSII_Pbs27	PF13326.6	gi|298675884|ref|YP_003727634.1|	-	0.12	12.7	0.0	0.18	12.1	0.0	1.3	1	0	0	1	1	1	0	Photosystem	II	Pbs27
BPD_transp_1	PF00528.22	gi|298675885|ref|YP_003727635.1|	-	1.2e-21	77.3	8.3	1.2e-21	77.3	8.3	1.8	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.27	gi|298675886|ref|YP_003727636.1|	-	9.8e-34	116.8	0.0	1.6e-33	116.1	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675886|ref|YP_003727636.1|	-	3.2e-09	37.0	0.0	0.00012	22.0	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA	PF00004.29	gi|298675886|ref|YP_003727636.1|	-	2.6e-06	27.9	0.3	2.7e-05	24.6	0.3	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|298675886|ref|YP_003727636.1|	-	8.1e-06	26.2	0.1	4.5e-05	23.7	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|298675886|ref|YP_003727636.1|	-	1.6e-05	24.8	0.1	0.00011	22.1	0.1	2.0	1	1	0	2	2	2	1	AAA	ATPase	domain
Rad17	PF03215.15	gi|298675886|ref|YP_003727636.1|	-	7.7e-05	22.7	0.0	0.00017	21.6	0.0	1.5	1	0	0	1	1	1	1	Rad17	P-loop	domain
AAA_23	PF13476.6	gi|298675886|ref|YP_003727636.1|	-	8.5e-05	23.1	0.1	0.00017	22.1	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|298675886|ref|YP_003727636.1|	-	0.00021	21.2	0.0	0.00034	20.5	0.0	1.3	1	0	0	1	1	1	1	RsgA	GTPase
SMC_N	PF02463.19	gi|298675886|ref|YP_003727636.1|	-	0.00066	19.2	0.1	0.17	11.3	0.0	2.4	2	1	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_28	PF13521.6	gi|298675886|ref|YP_003727636.1|	-	0.001	19.3	0.0	0.0026	18.0	0.0	1.9	1	1	1	2	2	1	1	AAA	domain
ATPase_2	PF01637.18	gi|298675886|ref|YP_003727636.1|	-	0.0014	18.6	0.1	0.0052	16.7	0.0	1.8	2	0	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
NACHT	PF05729.12	gi|298675886|ref|YP_003727636.1|	-	0.0022	18.0	0.1	0.012	15.6	0.0	2.2	3	0	0	3	3	3	1	NACHT	domain
AAA_16	PF13191.6	gi|298675886|ref|YP_003727636.1|	-	0.0029	18.0	0.0	0.0081	16.6	0.0	1.7	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|298675886|ref|YP_003727636.1|	-	0.0077	16.0	0.0	0.015	15.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.6	gi|298675886|ref|YP_003727636.1|	-	0.0082	16.7	0.0	0.016	15.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.22	gi|298675886|ref|YP_003727636.1|	-	0.011	14.9	0.1	0.048	12.8	0.0	1.9	2	0	0	2	2	2	0	NB-ARC	domain
AAA_5	PF07728.14	gi|298675886|ref|YP_003727636.1|	-	0.013	15.5	0.0	0.031	14.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
PhoH	PF02562.16	gi|298675886|ref|YP_003727636.1|	-	0.016	14.6	0.1	0.032	13.7	0.0	1.5	2	0	0	2	2	1	0	PhoH-like	protein
AAA_33	PF13671.6	gi|298675886|ref|YP_003727636.1|	-	0.019	15.1	0.0	0.048	13.8	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|298675886|ref|YP_003727636.1|	-	0.03	14.1	0.0	0.075	12.8	0.0	1.6	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_14	PF13173.6	gi|298675886|ref|YP_003727636.1|	-	0.032	14.3	0.0	0.14	12.2	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.9	gi|298675886|ref|YP_003727636.1|	-	0.041	13.6	0.0	0.17	11.6	0.0	1.9	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
NTPase_1	PF03266.15	gi|298675886|ref|YP_003727636.1|	-	0.041	13.8	0.7	3	7.7	0.1	2.6	2	1	1	3	3	3	0	NTPase
AAA_30	PF13604.6	gi|298675886|ref|YP_003727636.1|	-	0.051	13.3	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|298675886|ref|YP_003727636.1|	-	0.078	12.7	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.14	gi|298675886|ref|YP_003727636.1|	-	0.087	12.7	0.1	0.58	10.1	0.0	2.3	3	0	0	3	3	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
T2SSE	PF00437.20	gi|298675886|ref|YP_003727636.1|	-	0.092	11.8	0.0	0.15	11.1	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_35	PF14516.6	gi|298675886|ref|YP_003727636.1|	-	0.094	11.5	0.0	0.13	11.0	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
RNA_helicase	PF00910.22	gi|298675886|ref|YP_003727636.1|	-	0.1	13.0	0.0	0.31	11.4	0.0	1.9	1	0	0	1	1	1	0	RNA	helicase
ResIII	PF04851.15	gi|298675886|ref|YP_003727636.1|	-	0.12	12.4	0.0	0.39	10.7	0.0	1.7	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Mg_chelatase	PF01078.21	gi|298675886|ref|YP_003727636.1|	-	0.13	11.7	0.0	0.56	9.6	0.0	1.9	2	1	1	3	3	3	0	Magnesium	chelatase,	subunit	ChlI
Adeno_IVa2	PF02456.15	gi|298675886|ref|YP_003727636.1|	-	0.16	10.7	0.0	0.19	10.5	0.0	1.2	1	0	0	1	1	1	0	Adenovirus	IVa2	protein
AAA_19	PF13245.6	gi|298675886|ref|YP_003727636.1|	-	0.19	12.1	0.1	0.63	10.4	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
Bactofilin	PF04519.13	gi|298675887|ref|YP_003727637.1|	-	1.9e-08	34.5	5.4	6e-07	29.7	0.9	1.8	1	1	1	2	2	2	2	Polymer-forming	cytoskeletal
Hexapep	PF00132.24	gi|298675887|ref|YP_003727637.1|	-	8.5e-05	22.1	2.3	0.0064	16.2	0.0	3.2	3	1	0	3	3	3	2	Bacterial	transferase	hexapeptide	(six	repeats)
SRP19	PF01922.17	gi|298675888|ref|YP_003727638.1|	-	4.6e-25	88.4	0.2	5.5e-25	88.1	0.2	1.1	1	0	0	1	1	1	1	SRP19	protein
AP_endonuc_2	PF01261.24	gi|298675890|ref|YP_003727640.1|	-	5.5e-25	88.1	0.0	7.2e-25	87.7	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
UvdE	PF03851.14	gi|298675890|ref|YP_003727640.1|	-	0.0072	15.6	0.1	0.013	14.8	0.1	1.3	1	1	0	1	1	1	1	UV-endonuclease	UvdE
HMGL-like	PF00682.19	gi|298675890|ref|YP_003727640.1|	-	0.017	14.7	0.0	0.037	13.6	0.0	1.5	2	0	0	2	2	2	0	HMGL-like
PI-PLC-X	PF00388.19	gi|298675890|ref|YP_003727640.1|	-	0.096	12.3	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	Phosphatidylinositol-specific	phospholipase	C,	X	domain
MtrE	PF04206.12	gi|298675891|ref|YP_003727641.1|	-	4.2e-139	462.4	12.1	4.8e-139	462.2	12.1	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	E
HlyE	PF06109.13	gi|298675891|ref|YP_003727641.1|	-	0.018	14.4	0.1	0.025	13.9	0.1	1.2	1	0	0	1	1	1	0	Haemolysin	E	(HlyE)
MtrD	PF04207.12	gi|298675892|ref|YP_003727642.1|	-	1.1e-98	329.3	25.8	1.3e-98	329.1	25.8	1.1	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	D
MtrC	PF04211.13	gi|298675893|ref|YP_003727643.1|	-	5.3e-109	363.4	29.8	6.1e-109	363.2	29.8	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	C
MtrB	PF05440.12	gi|298675894|ref|YP_003727644.1|	-	3.1e-40	136.5	0.2	3.6e-40	136.3	0.2	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase	subunit	B
MtrF	PF09472.10	gi|298675894|ref|YP_003727644.1|	-	0.013	14.9	0.9	0.025	14.0	0.5	1.7	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
MtrA	PF04208.14	gi|298675895|ref|YP_003727645.1|	-	5.4e-87	289.9	1.2	8.1e-87	289.3	1.2	1.2	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	A
MtrF	PF09472.10	gi|298675895|ref|YP_003727645.1|	-	0.0029	17.0	0.3	0.0075	15.6	0.3	1.8	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
MtrF	PF09472.10	gi|298675896|ref|YP_003727646.1|	-	4.4e-28	96.4	1.2	5e-28	96.3	1.2	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
MtrG	PF04210.13	gi|298675897|ref|YP_003727647.1|	-	6e-35	118.9	1.3	6.7e-35	118.7	1.3	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
MtrH	PF02007.18	gi|298675898|ref|YP_003727648.1|	-	6.7e-137	455.5	2.1	7.7e-137	455.3	2.1	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase	MtrH	subunit
DUF1894	PF08979.11	gi|298675900|ref|YP_003727650.1|	-	4.5e-32	110.3	0.0	5.1e-32	110.1	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1894)
AIRS_C	PF02769.22	gi|298675901|ref|YP_003727651.1|	-	8.6e-19	68.2	0.0	1.6e-18	67.3	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|298675901|ref|YP_003727651.1|	-	6.4e-16	58.8	0.4	1.1e-15	58.0	0.4	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
RRM_1	PF00076.22	gi|298675901|ref|YP_003727651.1|	-	0.005	16.6	0.1	0.01	15.6	0.1	1.4	1	0	0	1	1	1	1	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
AA_kinase	PF00696.28	gi|298675902|ref|YP_003727652.1|	-	6e-49	166.8	1.1	7.1e-49	166.6	0.1	1.6	2	0	0	2	2	2	1	Amino	acid	kinase	family
ACT_7	PF13840.6	gi|298675902|ref|YP_003727652.1|	-	1.4e-21	76.0	5.2	5.3e-11	42.1	1.9	2.7	2	0	0	2	2	2	2	ACT	domain
ACT	PF01842.25	gi|298675902|ref|YP_003727652.1|	-	1e-18	66.8	3.5	2.6e-10	39.9	0.5	2.8	2	0	0	2	2	2	2	ACT	domain
ACT_6	PF13740.6	gi|298675902|ref|YP_003727652.1|	-	0.048	13.6	0.2	0.34	10.9	0.1	2.3	2	0	0	2	2	2	0	ACT	domain
DUF3237	PF11578.8	gi|298675902|ref|YP_003727652.1|	-	0.13	12.1	0.1	1.8	8.4	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3237)
DUF5612	PF18462.1	gi|298675902|ref|YP_003727652.1|	-	0.34	10.7	5.1	0.4	10.5	3.4	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5612)
S-layer	PF07752.11	gi|298675903|ref|YP_003727653.1|	-	7.4e-11	41.6	12.7	1.1e-05	24.7	0.8	2.7	2	1	1	3	3	3	2	S-layer	protein
DUF1344	PF07076.11	gi|298675903|ref|YP_003727653.1|	-	0.11	12.4	2.2	4.2	7.4	0.1	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1344)
CE2_N	PF17996.1	gi|298675903|ref|YP_003727653.1|	-	0.79	9.7	4.0	1.2	9.1	0.4	2.8	3	0	0	3	3	3	0	Carbohydrate	esterase	2	N-terminal
PhosphMutase	PF10143.9	gi|298675904|ref|YP_003727654.1|	-	5.1e-59	199.0	0.0	6.9e-59	198.5	0.0	1.2	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.18	gi|298675904|ref|YP_003727654.1|	-	1.4e-38	132.7	0.8	1.6e-38	132.5	0.8	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.22	gi|298675904|ref|YP_003727654.1|	-	5.2e-05	23.0	0.0	0.00037	20.2	0.0	2.0	2	0	0	2	2	2	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Alk_phosphatase	PF00245.20	gi|298675904|ref|YP_003727654.1|	-	0.031	13.2	0.3	1.3	7.9	0.1	2.2	2	0	0	2	2	2	0	Alkaline	phosphatase
HSP20	PF00011.21	gi|298675905|ref|YP_003727655.1|	-	3e-23	81.9	0.8	3.4e-23	81.7	0.8	1.0	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|298675905|ref|YP_003727655.1|	-	6.4e-14	51.3	0.0	8.9e-14	50.8	0.0	1.2	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
FKBP26_C	PF18046.1	gi|298675905|ref|YP_003727655.1|	-	0.0025	17.9	0.6	0.13	12.3	0.1	2.3	2	0	0	2	2	2	1	FKBP26_C-terminal
GvpH	PF05455.11	gi|298675905|ref|YP_003727655.1|	-	0.0065	16.6	0.3	0.0097	16.0	0.3	1.2	1	0	0	1	1	1	1	GvpH
CS	PF04969.16	gi|298675905|ref|YP_003727655.1|	-	0.012	16.6	0.2	0.017	16.1	0.2	1.2	1	0	0	1	1	1	0	CS	domain
DUF2718	PF10918.8	gi|298675905|ref|YP_003727655.1|	-	0.082	13.4	0.1	0.1	13.1	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2718)
TPP1	PF10341.9	gi|298675905|ref|YP_003727655.1|	-	0.1	12.6	0.0	0.14	12.2	0.0	1.2	1	0	0	1	1	1	0	Shelterin	complex	subunit,	TPP1/ACD
GlcV_C_terminal	PF17847.1	gi|298675905|ref|YP_003727655.1|	-	0.13	12.7	0.2	2.2	8.8	0.3	2.1	2	0	0	2	2	2	0	Glucose	ABC	transporter	C-terminal	domain
HSP20	PF00011.21	gi|298675906|ref|YP_003727656.1|	-	1.1e-23	83.3	2.7	1.3e-23	83.1	2.7	1.1	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|298675906|ref|YP_003727656.1|	-	1.4e-12	47.0	0.0	2.4e-12	46.2	0.0	1.4	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
CS	PF04969.16	gi|298675906|ref|YP_003727656.1|	-	2.2e-05	25.4	0.1	3.2e-05	24.8	0.1	1.2	1	0	0	1	1	1	1	CS	domain
FKBP26_C	PF18046.1	gi|298675906|ref|YP_003727656.1|	-	0.0025	17.9	0.5	0.74	10.0	0.4	2.2	2	0	0	2	2	2	2	FKBP26_C-terminal
GvpH	PF05455.11	gi|298675906|ref|YP_003727656.1|	-	0.0069	16.5	0.8	0.011	15.9	0.8	1.3	1	0	0	1	1	1	1	GvpH
HSP20	PF00011.21	gi|298675907|ref|YP_003727657.1|	-	1.4e-23	83.0	2.5	1.7e-23	82.7	2.5	1.1	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|298675907|ref|YP_003727657.1|	-	1.5e-12	46.8	0.0	2.3e-12	46.3	0.0	1.3	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
CS	PF04969.16	gi|298675907|ref|YP_003727657.1|	-	0.0019	19.2	0.2	0.0027	18.7	0.2	1.2	1	0	0	1	1	1	1	CS	domain
FKBP26_C	PF18046.1	gi|298675907|ref|YP_003727657.1|	-	0.044	13.9	0.9	9.1	6.5	0.0	2.2	2	0	0	2	2	2	0	FKBP26_C-terminal
GvpH	PF05455.11	gi|298675907|ref|YP_003727657.1|	-	0.14	12.2	2.9	0.36	10.9	2.4	1.7	1	1	1	2	2	2	0	GvpH
F420_ligase	PF01996.16	gi|298675908|ref|YP_003727658.1|	-	1.7e-62	210.9	0.2	2.3e-62	210.5	0.2	1.1	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
Nucleoporin_C	PF03177.14	gi|298675908|ref|YP_003727658.1|	-	0.21	10.3	0.0	0.25	10.0	0.0	1.1	1	0	0	1	1	1	0	Non-repetitive/WGA-negative	nucleoporin	C-terminal
dCMP_cyt_deam_1	PF00383.23	gi|298675909|ref|YP_003727659.1|	-	5.8e-29	99.9	3.1	7.8e-29	99.5	3.1	1.2	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
MafB19-deam	PF14437.6	gi|298675909|ref|YP_003727659.1|	-	2.4e-22	79.2	0.9	3.1e-22	78.8	0.9	1.1	1	0	0	1	1	1	1	MafB19-like	deaminase
APOBEC_N	PF08210.11	gi|298675909|ref|YP_003727659.1|	-	0.0039	17.1	2.0	0.0057	16.6	2.0	1.5	1	1	0	1	1	1	1	APOBEC-like	N-terminal	domain
Bd3614-deam	PF14439.6	gi|298675909|ref|YP_003727659.1|	-	0.0049	16.9	1.2	0.011	15.8	0.5	1.7	1	1	1	2	2	2	1	Bd3614-like	deaminase
SNAD4	PF18750.1	gi|298675909|ref|YP_003727659.1|	-	0.0091	16.1	0.7	0.02	15.0	0.7	1.6	1	1	0	1	1	1	1	Secreted	Novel	AID/APOBEC-like	Deaminase	4
APOBEC2	PF18772.1	gi|298675909|ref|YP_003727659.1|	-	0.016	15.3	0.9	0.038	14.1	0.9	1.7	1	1	0	1	1	1	0	APOBEC2
APOBEC3	PF18771.1	gi|298675909|ref|YP_003727659.1|	-	0.017	15.3	0.4	0.022	14.9	0.4	1.3	1	0	0	1	1	1	0	APOBEC3
OTT_1508_deam	PF14441.6	gi|298675909|ref|YP_003727659.1|	-	0.022	14.8	0.2	0.037	14.0	0.2	1.4	1	0	0	1	1	1	0	OTT_1508-like	deaminase
XOO_2897-deam	PF14440.6	gi|298675909|ref|YP_003727659.1|	-	0.034	14.3	0.1	0.052	13.7	0.1	1.3	1	0	0	1	1	1	0	Xanthomonas	XOO_2897-like	deaminase
NAD1	PF18778.1	gi|298675909|ref|YP_003727659.1|	-	0.071	13.2	1.5	0.12	12.4	1.5	1.4	1	1	0	1	1	1	0	Novel	AID	APOBEC	clade	1
Inv-AAD	PF18785.1	gi|298675909|ref|YP_003727659.1|	-	0.081	12.8	1.0	0.2	11.5	1.0	1.7	1	1	0	1	1	1	0	Invertebrate-AID/APOBEC-deaminase
zf-C3HC4	PF00097.25	gi|298675909|ref|YP_003727659.1|	-	0.6	10.0	6.9	0.33	10.9	3.6	2.1	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
SecD_SecF	PF02355.16	gi|298675910|ref|YP_003727660.1|	-	7e-34	116.9	13.7	1.2e-33	116.1	13.7	1.3	1	0	0	1	1	1	1	Protein	export	membrane	protein
Patched	PF02460.18	gi|298675910|ref|YP_003727660.1|	-	0.007	14.5	13.3	0.0097	14.0	13.3	1.1	1	0	0	1	1	1	1	Patched	family
Sec_GG	PF07549.14	gi|298675910|ref|YP_003727660.1|	-	0.019	14.4	0.0	0.041	13.4	0.0	1.6	1	0	0	1	1	1	0	SecD/SecF	GG	Motif
SecD_SecF	PF02355.16	gi|298675911|ref|YP_003727661.1|	-	6.1e-15	55.1	5.3	1.4e-14	54.0	5.3	1.5	1	0	0	1	1	1	1	Protein	export	membrane	protein
MMPL	PF03176.15	gi|298675911|ref|YP_003727661.1|	-	0.0045	16.0	10.2	0.0095	14.9	10.2	1.5	1	0	0	1	1	1	1	MMPL	family
Sec_GG	PF07549.14	gi|298675911|ref|YP_003727661.1|	-	0.028	13.9	0.1	0.1	12.1	0.1	1.9	1	0	0	1	1	1	0	SecD/SecF	GG	Motif
Big_3_5	PF16640.5	gi|298675911|ref|YP_003727661.1|	-	0.11	12.7	2.2	0.22	11.7	2.2	1.4	1	0	0	1	1	1	0	Bacterial	Ig-like	domain	(group	3)
DNA_pol3_delta2	PF13177.6	gi|298675912|ref|YP_003727662.1|	-	7.6e-16	58.3	0.0	1.7e-15	57.2	0.0	1.6	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
Rep_fac_C	PF08542.11	gi|298675912|ref|YP_003727662.1|	-	8.5e-14	51.7	0.3	8.5e-14	51.7	0.3	2.0	2	1	0	2	2	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.29	gi|298675912|ref|YP_003727662.1|	-	1e-09	38.9	0.0	3.1e-09	37.3	0.0	1.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta	PF06144.13	gi|298675912|ref|YP_003727662.1|	-	1.8e-07	31.1	0.4	5.1e-07	29.6	0.1	1.9	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.15	gi|298675912|ref|YP_003727662.1|	-	5.7e-07	29.6	0.1	1.1e-06	28.7	0.1	1.5	1	0	0	1	1	1	1	Rad17	P-loop	domain
AAA_14	PF13173.6	gi|298675912|ref|YP_003727662.1|	-	1.5e-05	25.0	1.6	6.6e-05	23.0	0.2	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|298675912|ref|YP_003727662.1|	-	8.6e-05	23.0	0.0	0.00055	20.4	0.0	2.2	2	1	0	2	2	2	1	AAA	ATPase	domain
ATPase_2	PF01637.18	gi|298675912|ref|YP_003727662.1|	-	0.00072	19.5	1.3	0.0013	18.7	0.3	1.9	1	1	1	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_22	PF13401.6	gi|298675912|ref|YP_003727662.1|	-	0.0011	19.2	0.0	0.025	14.9	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
ResIII	PF04851.15	gi|298675912|ref|YP_003727662.1|	-	0.0024	17.9	0.1	0.014	15.4	0.1	2.1	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
TIP49	PF06068.13	gi|298675912|ref|YP_003727662.1|	-	0.0034	16.6	0.1	0.2	10.8	0.0	3.0	3	1	1	4	4	4	1	TIP49	P-loop	domain
AAA_assoc_2	PF16193.5	gi|298675912|ref|YP_003727662.1|	-	0.008	16.5	0.0	0.022	15.1	0.0	1.8	1	0	0	1	1	1	1	AAA	C-terminal	domain
RuvB_N	PF05496.12	gi|298675912|ref|YP_003727662.1|	-	0.016	15.0	0.0	1.2	8.9	0.0	2.5	2	1	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
CLP1_P	PF16575.5	gi|298675912|ref|YP_003727662.1|	-	0.045	13.5	0.0	1.1	9.0	0.0	2.3	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
RE_MjaI	PF09568.10	gi|298675912|ref|YP_003727662.1|	-	0.08	12.8	0.5	0.16	11.8	0.5	1.5	1	0	0	1	1	1	0	MjaI	restriction	endonuclease
Sigma54_activ_2	PF14532.6	gi|298675912|ref|YP_003727662.1|	-	0.088	12.9	0.0	0.26	11.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_7	PF12775.7	gi|298675912|ref|YP_003727662.1|	-	0.1	12.1	0.3	1.1	8.7	0.0	2.4	2	1	1	3	3	3	0	P-loop	containing	dynein	motor	region
RNA_helicase	PF00910.22	gi|298675912|ref|YP_003727662.1|	-	0.13	12.6	0.1	0.5	10.8	0.0	2.0	2	0	0	2	2	2	0	RNA	helicase
Radical_SAM_C	PF16199.5	gi|298675913|ref|YP_003727663.1|	-	8.1e-28	96.3	0.1	1.7e-27	95.2	0.1	1.6	1	0	0	1	1	1	1	Radical_SAM	C-terminal	domain
Radical_SAM	PF04055.21	gi|298675913|ref|YP_003727663.1|	-	8.3e-20	71.8	0.0	6.8e-19	68.9	0.0	2.3	1	1	1	2	2	2	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.25	gi|298675913|ref|YP_003727663.1|	-	3.4e-07	30.5	0.2	7.1e-07	29.5	0.2	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|298675913|ref|YP_003727663.1|	-	9.9e-05	22.3	0.2	0.00023	21.1	0.2	1.6	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|298675913|ref|YP_003727663.1|	-	0.0071	16.7	0.9	0.018	15.4	0.9	1.7	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
zinc_ribbon_5	PF13719.6	gi|298675913|ref|YP_003727663.1|	-	0.16	11.7	2.5	0.34	10.7	1.4	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
TrmB	PF01978.19	gi|298675914|ref|YP_003727664.1|	-	9.3e-06	25.4	0.1	1.7e-05	24.6	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|298675914|ref|YP_003727664.1|	-	0.0049	16.7	0.0	0.0092	15.8	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Sporozoite_P67	PF05642.11	gi|298675914|ref|YP_003727664.1|	-	0.014	13.5	0.8	0.014	13.5	0.8	1.2	1	0	0	1	1	1	0	Sporozoite	P67	surface	antigen
HeLo	PF14479.6	gi|298675914|ref|YP_003727664.1|	-	0.024	14.5	1.9	0.024	14.5	1.9	1.6	2	0	0	2	2	2	0	Prion-inhibition	and	propagation
ssDNA_DBD	PF18333.1	gi|298675914|ref|YP_003727664.1|	-	0.2	11.7	3.6	0.4	10.8	0.4	2.0	1	1	1	2	2	2	0	Non-canonical	single-stranded	DNA-binding	domain
AAA_31	PF13614.6	gi|298675915|ref|YP_003727665.1|	-	8.5e-18	64.9	0.2	1.6e-17	64.0	0.1	1.4	2	0	0	2	2	2	1	AAA	domain
ParA	PF10609.9	gi|298675915|ref|YP_003727665.1|	-	1.3e-15	57.6	0.2	2.7e-13	49.9	0.2	2.9	1	1	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|298675915|ref|YP_003727665.1|	-	6.9e-11	42.3	0.0	1.2e-10	41.5	0.0	1.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.11	gi|298675915|ref|YP_003727665.1|	-	6.8e-07	28.8	0.0	1.1e-05	24.8	0.0	2.1	1	1	0	1	1	1	1	ATPase	MipZ
CBP_BcsQ	PF06564.12	gi|298675915|ref|YP_003727665.1|	-	0.00018	21.1	0.0	0.00046	19.7	0.0	1.7	1	1	0	1	1	1	1	Cellulose	biosynthesis	protein	BcsQ
VirC1	PF07015.11	gi|298675915|ref|YP_003727665.1|	-	0.0015	17.9	0.0	0.032	13.5	0.0	2.1	2	0	0	2	2	2	1	VirC1	protein
ArsA_ATPase	PF02374.15	gi|298675915|ref|YP_003727665.1|	-	0.012	14.8	0.0	0.11	11.7	0.0	2.2	2	0	0	2	2	2	0	Anion-transporting	ATPase
CLP1_P	PF16575.5	gi|298675915|ref|YP_003727665.1|	-	0.036	13.8	0.0	0.093	12.5	0.0	1.6	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
Fer4_NifH	PF00142.18	gi|298675915|ref|YP_003727665.1|	-	0.047	13.1	0.3	0.41	10.1	0.0	2.0	2	0	0	2	2	2	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
SRP54	PF00448.22	gi|298675915|ref|YP_003727665.1|	-	0.06	13.0	0.1	6	6.5	0.0	2.2	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
LpxK	PF02606.14	gi|298675915|ref|YP_003727665.1|	-	0.13	11.3	0.0	0.22	10.6	0.0	1.3	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
AAA_25	PF13481.6	gi|298675915|ref|YP_003727665.1|	-	0.29	10.7	0.3	0.84	9.2	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
Trep_Strep	PF09605.10	gi|298675916|ref|YP_003727666.1|	-	0.0063	16.5	18.1	0.017	15.1	18.1	1.7	1	1	0	1	1	1	1	Hypothetical	bacterial	integral	membrane	protein	(Trep_Strep)
CPP1-like	PF11833.8	gi|298675916|ref|YP_003727666.1|	-	1.1	8.9	3.7	2.6	7.7	3.6	1.9	1	1	0	1	1	1	0	Protein	CHAPERONE-LIKE	PROTEIN	OF	POR1-like
DUF1699	PF08004.11	gi|298675917|ref|YP_003727667.1|	-	1.4e-62	209.2	2.9	1.5e-62	209.0	2.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1699)
IZUMO	PF15005.6	gi|298675917|ref|YP_003727667.1|	-	0.035	14.6	0.6	0.067	13.7	0.6	1.6	1	1	1	2	2	2	0	Izumo	sperm-egg	fusion,	Ig	domain-associated
UPF0047	PF01894.17	gi|298675918|ref|YP_003727668.1|	-	1.1e-32	112.6	0.0	1.3e-32	112.4	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
MNSV_P7B	PF06692.11	gi|298675919|ref|YP_003727669.1|	-	0.11	12.5	1.4	0.19	11.7	0.2	1.7	1	1	1	2	2	2	0	Melon	necrotic	spot	virus	P7B	protein
Hjc	PF01870.18	gi|298675920|ref|YP_003727670.1|	-	0.048	13.6	0.0	0.11	12.4	0.0	1.6	1	1	0	1	1	1	0	Archaeal	holliday	junction	resolvase	(hjc)
DHHA1	PF02272.19	gi|298675921|ref|YP_003727671.1|	-	3.1e-16	60.0	0.2	7.7e-16	58.8	0.2	1.7	1	0	0	1	1	1	1	DHHA1	domain
DHH	PF01368.20	gi|298675921|ref|YP_003727671.1|	-	0.034	14.4	0.2	0.065	13.5	0.2	1.5	1	0	0	1	1	1	0	DHH	family
Zn_protease	PF05618.11	gi|298675922|ref|YP_003727672.1|	-	4.2e-10	39.7	0.0	1.4e-09	38.0	0.0	1.7	1	1	0	1	1	1	1	Putative	ATP-dependant	zinc	protease
Pep_deformylase	PF01327.21	gi|298675922|ref|YP_003727672.1|	-	3.6e-05	23.4	0.1	0.00023	20.8	0.1	1.9	1	1	0	1	1	1	1	Polypeptide	deformylase
FdhD-NarQ	PF02634.15	gi|298675923|ref|YP_003727673.1|	-	4.3e-51	173.9	0.0	5.7e-51	173.5	0.0	1.2	1	0	0	1	1	1	1	FdhD/NarQ	family
AAA_16	PF13191.6	gi|298675924|ref|YP_003727674.1|	-	5.1e-12	46.5	0.0	5.4e-09	36.7	0.0	3.0	2	1	0	2	2	2	1	AAA	ATPase	domain
NACHT	PF05729.12	gi|298675924|ref|YP_003727674.1|	-	1.4e-06	28.4	0.0	2.4e-06	27.6	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
AAA_22	PF13401.6	gi|298675924|ref|YP_003727674.1|	-	3.4e-06	27.4	0.0	9.6e-06	25.9	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
AAA	PF00004.29	gi|298675924|ref|YP_003727674.1|	-	1.4e-05	25.5	0.0	3.4e-05	24.3	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_11	PF13086.6	gi|298675924|ref|YP_003727674.1|	-	1.6e-05	24.8	0.0	3.1e-05	23.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_7	PF12775.7	gi|298675924|ref|YP_003727674.1|	-	2.7e-05	23.7	0.2	0.0028	17.2	0.0	3.0	4	0	0	4	4	4	1	P-loop	containing	dynein	motor	region
ATPase_2	PF01637.18	gi|298675924|ref|YP_003727674.1|	-	4.1e-05	23.6	0.0	8.3e-05	22.6	0.0	1.5	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
Cdc6_C	PF09079.11	gi|298675924|ref|YP_003727674.1|	-	0.0009	19.2	0.0	0.0032	17.4	0.0	2.0	1	0	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
Sigma54_activat	PF00158.26	gi|298675924|ref|YP_003727674.1|	-	0.0021	17.8	0.0	0.0037	17.0	0.0	1.4	1	0	0	1	1	1	1	Sigma-54	interaction	domain
NTPase_1	PF03266.15	gi|298675924|ref|YP_003727674.1|	-	0.0022	18.0	0.0	0.0056	16.6	0.0	1.7	2	0	0	2	2	1	1	NTPase
NB-ARC	PF00931.22	gi|298675924|ref|YP_003727674.1|	-	0.003	16.8	0.0	0.0044	16.2	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
T2SSE	PF00437.20	gi|298675924|ref|YP_003727674.1|	-	0.004	16.3	0.0	0.0059	15.7	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_19	PF13245.6	gi|298675924|ref|YP_003727674.1|	-	0.0085	16.4	0.0	0.015	15.7	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
DUF2075	PF09848.9	gi|298675924|ref|YP_003727674.1|	-	0.0095	15.2	0.0	0.013	14.7	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
DUF815	PF05673.13	gi|298675924|ref|YP_003727674.1|	-	0.019	14.2	0.0	0.14	11.3	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
AAA_30	PF13604.6	gi|298675924|ref|YP_003727674.1|	-	0.031	14.0	0.0	0.054	13.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ResIII	PF04851.15	gi|298675924|ref|YP_003727674.1|	-	0.035	14.1	0.0	0.1	12.6	0.0	1.7	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
ATPase	PF06745.13	gi|298675924|ref|YP_003727674.1|	-	0.037	13.4	0.1	0.11	11.8	0.0	1.8	2	0	0	2	2	2	0	KaiC
Rad17	PF03215.15	gi|298675924|ref|YP_003727674.1|	-	0.038	13.9	0.0	0.078	12.9	0.0	1.7	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_24	PF13479.6	gi|298675924|ref|YP_003727674.1|	-	0.042	13.6	0.2	0.14	11.9	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|298675924|ref|YP_003727674.1|	-	0.046	14.1	0.0	0.13	12.6	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
AAA_35	PF14516.6	gi|298675924|ref|YP_003727674.1|	-	0.048	12.5	0.0	0.59	8.9	0.0	2.1	2	0	0	2	2	2	0	AAA-like	domain
AAA_32	PF13654.6	gi|298675924|ref|YP_003727674.1|	-	0.053	12.3	0.0	1	8.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
RuvB_N	PF05496.12	gi|298675924|ref|YP_003727674.1|	-	0.09	12.5	0.1	0.34	10.7	0.0	1.9	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Zeta_toxin	PF06414.12	gi|298675924|ref|YP_003727674.1|	-	0.095	12.0	0.0	0.25	10.6	0.0	1.6	2	0	0	2	2	2	0	Zeta	toxin
AAA_18	PF13238.6	gi|298675924|ref|YP_003727674.1|	-	0.1	13.2	0.0	0.36	11.4	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.6	gi|298675924|ref|YP_003727674.1|	-	0.11	12.5	0.3	0.49	10.4	0.1	2.2	2	1	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|298675924|ref|YP_003727674.1|	-	0.12	12.1	2.5	3.1	7.5	0.1	2.9	2	1	2	4	4	3	0	IstB-like	ATP	binding	protein
AAA_33	PF13671.6	gi|298675924|ref|YP_003727674.1|	-	0.12	12.5	0.0	0.58	10.3	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_5	PF07728.14	gi|298675924|ref|YP_003727674.1|	-	0.18	11.8	0.0	0.45	10.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Cpn60_TCP1	PF00118.24	gi|298675925|ref|YP_003727675.1|	-	2.4e-186	620.2	19.0	2.8e-186	619.9	19.0	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DUF5350	PF17299.2	gi|298675926|ref|YP_003727676.1|	-	9.2e-27	93.3	5.6	9.9e-27	93.2	5.6	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5350)
MFS_1	PF07690.16	gi|298675927|ref|YP_003727677.1|	-	4.9e-54	183.6	42.6	4.9e-54	183.6	42.6	1.6	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|298675927|ref|YP_003727677.1|	-	1.7e-08	33.3	23.3	2.3e-08	32.9	23.3	1.1	1	0	0	1	1	1	1	Transmembrane	secretion	effector
MFS_2	PF13347.6	gi|298675927|ref|YP_003727677.1|	-	5.4e-08	31.8	41.4	2.4e-06	26.4	10.5	3.0	1	1	2	3	3	3	2	MFS/sugar	transport	protein
MFS_1_like	PF12832.7	gi|298675927|ref|YP_003727677.1|	-	0.32	9.8	27.8	49	2.6	25.4	2.2	1	1	0	1	1	1	0	MFS_1	like	family
KdpC	PF02669.15	gi|298675927|ref|YP_003727677.1|	-	0.41	10.5	2.7	0.4	10.5	0.3	2.1	2	0	0	2	2	2	0	K+-transporting	ATPase,	c	chain
Peptidase_M50	PF02163.22	gi|298675928|ref|YP_003727678.1|	-	7.8e-15	54.8	10.2	1e-07	31.5	0.5	2.5	1	1	1	2	2	2	2	Peptidase	family	M50
DUF126	PF01989.16	gi|298675929|ref|YP_003727679.1|	-	4.2e-35	119.4	0.3	7.1e-35	118.7	0.3	1.4	1	0	0	1	1	1	1	Aconitase	X	swivel	domain
DUF521	PF04412.13	gi|298675930|ref|YP_003727680.1|	-	1.5e-158	527.8	0.0	1.7e-158	527.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
PhnA_Zn_Ribbon	PF08274.12	gi|298675930|ref|YP_003727680.1|	-	0.043	13.8	2.5	0.54	10.3	0.1	2.6	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
tRNA-synt_1g	PF09334.11	gi|298675930|ref|YP_003727680.1|	-	0.065	12.0	0.2	0.095	11.4	0.2	1.2	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(M)
UbiD	PF01977.16	gi|298675931|ref|YP_003727681.1|	-	6.3e-111	371.1	0.1	7.1e-111	370.9	0.1	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Metallophos_3	PF14582.6	gi|298675932|ref|YP_003727682.1|	-	4.2e-116	386.8	0.6	4.6e-116	386.6	0.6	1.0	1	0	0	1	1	1	1	Metallophosphoesterase,	calcineurin	superfamily
Metallophos_2	PF12850.7	gi|298675932|ref|YP_003727682.1|	-	3.4e-24	85.9	0.0	5.8e-24	85.1	0.0	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|298675932|ref|YP_003727682.1|	-	9.2e-17	62.2	0.0	1.2e-16	61.8	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
sCache_3_3	PF17202.4	gi|298675933|ref|YP_003727683.1|	-	7.3e-05	23.2	0.8	0.00018	21.9	0.8	1.6	1	0	0	1	1	1	1	Single	cache	domain	3
Cache_3-Cache_2	PF17201.4	gi|298675933|ref|YP_003727683.1|	-	0.00041	19.7	2.5	0.00041	19.7	2.5	2.0	1	1	1	2	2	2	1	Cache	3/Cache	2	fusion	domain
Rubrerythrin	PF02915.17	gi|298675934|ref|YP_003727684.1|	-	4.2e-33	114.6	2.3	5.6e-33	114.2	2.3	1.2	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.24	gi|298675934|ref|YP_003727684.1|	-	1.6e-11	44.3	0.7	2e-11	44.0	0.7	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
COQ7	PF03232.13	gi|298675934|ref|YP_003727684.1|	-	0.00077	19.3	2.3	0.094	12.5	0.1	2.1	2	0	0	2	2	2	2	Ubiquinone	biosynthesis	protein	COQ7
DUF892	PF05974.12	gi|298675934|ref|YP_003727684.1|	-	0.0011	19.1	0.9	0.14	12.2	0.1	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF892)
HypA	PF01155.19	gi|298675934|ref|YP_003727684.1|	-	0.0044	17.0	2.2	0.011	15.8	2.2	1.9	1	1	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
RE_TdeIII	PF09520.10	gi|298675934|ref|YP_003727684.1|	-	0.016	14.9	0.1	1.9	8.1	0.0	2.1	2	0	0	2	2	2	0	Type	II	restriction	endonuclease,	TdeIII
BAR_3_WASP_bdg	PF10456.9	gi|298675934|ref|YP_003727684.1|	-	0.031	13.7	0.2	0.058	12.8	0.2	1.5	1	1	0	1	1	1	0	WASP-binding	domain	of	Sorting	nexin	protein
zf-C2HC5	PF06221.13	gi|298675934|ref|YP_003727684.1|	-	0.037	14.0	0.1	0.067	13.2	0.1	1.4	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
Arfaptin	PF06456.13	gi|298675934|ref|YP_003727684.1|	-	0.067	12.7	1.0	0.44	10.1	0.9	2.0	1	1	0	1	1	1	0	Arfaptin-like	domain
RNA_POL_M_15KD	PF02150.16	gi|298675934|ref|YP_003727684.1|	-	0.11	12.4	0.2	0.11	12.4	0.2	2.1	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
MCM_OB	PF17207.3	gi|298675934|ref|YP_003727684.1|	-	0.14	12.0	2.1	0.24	11.2	2.1	1.3	1	0	0	1	1	1	0	MCM	OB	domain
zinc_ribbon_10	PF10058.9	gi|298675934|ref|YP_003727684.1|	-	0.92	9.3	3.7	0.74	9.6	0.2	2.6	3	0	0	3	3	3	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
DUF4379	PF14311.6	gi|298675934|ref|YP_003727684.1|	-	1.4	9.4	6.5	18	5.8	6.4	2.6	1	1	1	2	2	2	0	Probable	Zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|298675934|ref|YP_003727684.1|	-	3.7	7.3	7.5	1.9	8.3	0.5	2.6	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
zf-ribbon_3	PF13248.6	gi|298675934|ref|YP_003727684.1|	-	4.1	6.9	7.2	15	5.1	0.7	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
Aldolase_II	PF00596.21	gi|298675936|ref|YP_003727686.1|	-	2.3e-33	115.7	0.0	2.6e-33	115.5	0.0	1.0	1	0	0	1	1	1	1	Class	II	Aldolase	and	Adducin	N-terminal	domain
CDP-OH_P_transf	PF01066.21	gi|298675937|ref|YP_003727687.1|	-	1.1e-12	48.5	2.2	1.1e-12	48.5	2.2	2.5	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
Archease	PF01951.16	gi|298675938|ref|YP_003727688.1|	-	1.5e-46	158.1	0.2	1.7e-46	157.9	0.2	1.1	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
RtcB	PF01139.17	gi|298675939|ref|YP_003727689.1|	-	9e-171	568.6	0.2	1e-170	568.4	0.2	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
TGT_C2	PF14810.6	gi|298675940|ref|YP_003727690.1|	-	1.9e-27	95.2	0.0	5.6e-27	93.7	0.0	1.7	2	0	0	2	2	2	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.20	gi|298675940|ref|YP_003727690.1|	-	3.4e-14	52.6	0.1	6.4e-14	51.7	0.1	1.5	1	0	0	1	1	1	1	PUA	domain
AbrB_C	PF18277.1	gi|298675940|ref|YP_003727690.1|	-	0.0013	18.3	0.1	0.19	11.4	0.0	2.4	2	0	0	2	2	2	2	AbrB	C-terminal	domain
UPF0113	PF03657.13	gi|298675940|ref|YP_003727690.1|	-	0.011	16.0	0.0	0.018	15.3	0.0	1.4	1	0	0	1	1	1	0	UPF0113	PUA	domain
PUA_3	PF17785.1	gi|298675940|ref|YP_003727690.1|	-	0.018	14.8	0.0	0.099	12.5	0.0	2.0	1	1	1	2	2	2	0	PUA-like	domain
DUF4788	PF16032.5	gi|298675940|ref|YP_003727690.1|	-	0.12	11.3	0.0	4.2	6.3	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4788)
Bactofilin	PF04519.13	gi|298675941|ref|YP_003727691.1|	-	9.3e-11	41.9	15.8	9.4e-07	29.1	0.9	3.8	2	2	2	4	4	4	4	Polymer-forming	cytoskeletal
DUF3494	PF11999.8	gi|298675941|ref|YP_003727691.1|	-	0.039	13.6	6.1	0.044	13.4	0.2	2.7	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF3494)
Hexapep	PF00132.24	gi|298675941|ref|YP_003727691.1|	-	9.4	6.1	30.2	14	5.6	1.0	7.0	6	2	1	8	8	8	0	Bacterial	transferase	hexapeptide	(six	repeats)
HTH_5	PF01022.20	gi|298675942|ref|YP_003727692.1|	-	1.4e-14	53.7	0.8	2.8e-14	52.7	0.3	1.7	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|298675942|ref|YP_003727692.1|	-	9.6e-11	41.6	0.0	1.4e-10	41.1	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.22	gi|298675942|ref|YP_003727692.1|	-	9.1e-09	35.1	0.1	1.5e-08	34.4	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HxlR	PF01638.17	gi|298675942|ref|YP_003727692.1|	-	6.8e-08	32.3	0.2	1.2e-07	31.4	0.2	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_24	PF13412.6	gi|298675942|ref|YP_003727692.1|	-	2.2e-06	27.1	0.2	4.5e-06	26.1	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|298675942|ref|YP_003727692.1|	-	2.3e-06	27.4	0.0	3.7e-06	26.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.6	gi|298675942|ref|YP_003727692.1|	-	9.8e-06	26.0	0.1	1.6e-05	25.3	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|298675942|ref|YP_003727692.1|	-	3.8e-05	23.5	0.1	6.5e-05	22.7	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.19	gi|298675942|ref|YP_003727692.1|	-	7.4e-05	22.9	0.1	0.00012	22.2	0.1	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.10	gi|298675942|ref|YP_003727692.1|	-	0.00038	20.2	0.0	0.00073	19.3	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_36	PF13730.6	gi|298675942|ref|YP_003727692.1|	-	0.00049	20.0	0.1	0.00086	19.2	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.6	gi|298675942|ref|YP_003727692.1|	-	0.00062	19.7	0.3	0.00092	19.1	0.3	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_10	PF04967.12	gi|298675942|ref|YP_003727692.1|	-	0.001	18.8	0.0	0.002	17.9	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_28	PF13518.6	gi|298675942|ref|YP_003727692.1|	-	0.0011	19.1	0.0	0.0017	18.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.14	gi|298675942|ref|YP_003727692.1|	-	0.0013	18.6	0.2	0.0022	17.9	0.2	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
IF2_N	PF04760.15	gi|298675942|ref|YP_003727692.1|	-	0.0016	18.2	0.3	0.0037	17.0	0.2	1.7	1	1	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
Penicillinase_R	PF03965.16	gi|298675942|ref|YP_003727692.1|	-	0.0016	18.8	0.1	0.0023	18.2	0.1	1.2	1	0	0	1	1	1	1	Penicillinase	repressor
DDRGK	PF09756.9	gi|298675942|ref|YP_003727692.1|	-	0.002	17.7	0.1	0.0027	17.3	0.1	1.1	1	0	0	1	1	1	1	DDRGK	domain
HTH_11	PF08279.12	gi|298675942|ref|YP_003727692.1|	-	0.0029	17.5	0.3	0.0049	16.8	0.3	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_Crp_2	PF13545.6	gi|298675942|ref|YP_003727692.1|	-	0.003	17.5	0.0	0.0047	16.9	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_34	PF13601.6	gi|298675942|ref|YP_003727692.1|	-	0.0031	17.7	0.1	0.0047	17.1	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_41	PF14502.6	gi|298675942|ref|YP_003727692.1|	-	0.0035	17.0	0.1	0.0061	16.2	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.20	gi|298675942|ref|YP_003727692.1|	-	0.0038	17.5	0.0	0.0065	16.8	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_29	PF13551.6	gi|298675942|ref|YP_003727692.1|	-	0.004	17.1	0.0	0.006	16.6	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_DeoR	PF08220.12	gi|298675942|ref|YP_003727692.1|	-	0.0049	16.6	0.1	0.0076	16.0	0.1	1.2	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
GntR	PF00392.21	gi|298675942|ref|YP_003727692.1|	-	0.0062	16.2	0.1	0.0094	15.6	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
BLACT_WH	PF17778.1	gi|298675942|ref|YP_003727692.1|	-	0.0085	16.1	0.3	0.015	15.3	0.3	1.4	1	0	0	1	1	1	1	Beta-lactamase	associated	winged	helix	domain
HTH_22	PF13309.6	gi|298675942|ref|YP_003727692.1|	-	0.015	15.4	0.0	0.13	12.4	0.0	2.2	1	1	0	1	1	1	0	HTH	domain
Mga	PF05043.13	gi|298675942|ref|YP_003727692.1|	-	0.015	15.9	0.3	0.025	15.1	0.3	1.3	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
HTH_40	PF14493.6	gi|298675942|ref|YP_003727692.1|	-	0.027	14.9	0.0	0.042	14.3	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
FaeA	PF04703.12	gi|298675942|ref|YP_003727692.1|	-	0.036	14.4	0.0	0.065	13.6	0.0	1.3	1	0	0	1	1	1	0	FaeA-like	protein
Phage_holin_2_1	PF04971.12	gi|298675942|ref|YP_003727692.1|	-	0.056	13.4	0.2	0.15	12.1	0.1	1.6	2	0	0	2	2	2	0	Bacteriophage	P21	holin	S
LexA_DNA_bind	PF01726.16	gi|298675942|ref|YP_003727692.1|	-	0.058	13.2	0.1	0.096	12.5	0.1	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
RepL	PF05732.11	gi|298675942|ref|YP_003727692.1|	-	0.092	12.2	0.0	0.13	11.7	0.0	1.2	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
HTH_12	PF08461.10	gi|298675942|ref|YP_003727692.1|	-	0.093	12.7	0.2	0.17	11.9	0.2	1.6	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
PaaX	PF07848.12	gi|298675942|ref|YP_003727692.1|	-	0.095	12.9	0.0	0.15	12.3	0.0	1.4	1	0	0	1	1	1	0	PaaX-like	protein
DUF2250	PF10007.9	gi|298675942|ref|YP_003727692.1|	-	0.14	12.3	1.7	0.87	9.7	0.3	2.2	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_30	PF13556.6	gi|298675942|ref|YP_003727692.1|	-	0.14	12.0	0.2	0.27	11.1	0.0	1.5	2	0	0	2	2	1	0	PucR	C-terminal	helix-turn-helix	domain
Top6b_C	PF18000.1	gi|298675943|ref|YP_003727693.1|	-	0.017	15.2	0.2	0.058	13.6	0.2	2.0	1	0	0	1	1	1	0	Type	2	DNA	topoisomerase	6	subunit	B	C-terminal	domain
SM-ATX	PF14438.6	gi|298675943|ref|YP_003727693.1|	-	0.033	14.3	0.0	0.083	13.0	0.0	1.6	1	0	0	1	1	1	0	Ataxin	2	SM	domain
DUF4140	PF13600.6	gi|298675943|ref|YP_003727693.1|	-	0.055	13.9	0.1	0.14	12.6	0.1	1.6	1	0	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
LSM	PF01423.22	gi|298675943|ref|YP_003727693.1|	-	0.058	13.1	0.1	0.2	11.4	0.1	1.9	1	0	0	1	1	1	0	LSM	domain
DUF4139	PF13598.6	gi|298675943|ref|YP_003727693.1|	-	0.93	9.2	4.6	4.4	7.0	1.3	3.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4139)
OrfB_IS605	PF01385.19	gi|298675944|ref|YP_003727694.1|	-	1e-23	83.8	0.1	4.9e-23	81.6	0.0	2.2	2	1	1	3	3	3	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298675944|ref|YP_003727694.1|	-	2.8e-10	40.0	0.2	9.6e-10	38.3	0.1	2.1	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
DUF919	PF06034.11	gi|298675944|ref|YP_003727694.1|	-	0.0041	16.9	0.5	0.012	15.5	0.5	1.8	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
RuvX	PF03652.15	gi|298675944|ref|YP_003727694.1|	-	0.011	16.1	0.0	0.033	14.6	0.0	1.8	2	0	0	2	2	2	0	Holliday	junction	resolvase
Aminotran_3	PF00202.21	gi|298675945|ref|YP_003727695.1|	-	1.3e-126	422.6	0.1	1.5e-126	422.3	0.1	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_5	PF00266.19	gi|298675945|ref|YP_003727695.1|	-	4.6e-05	22.6	0.1	0.00015	20.8	0.1	1.8	2	0	0	2	2	2	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|298675945|ref|YP_003727695.1|	-	0.00017	20.9	0.0	0.00076	18.7	0.0	1.9	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
StbA	PF06406.11	gi|298675945|ref|YP_003727695.1|	-	0.026	13.8	0.1	0.051	12.8	0.1	1.4	1	0	0	1	1	1	0	StbA	protein
Sigma70_r1_1	PF03979.14	gi|298675945|ref|YP_003727695.1|	-	0.12	12.5	0.2	0.82	9.8	0.0	2.2	2	0	0	2	2	2	0	Sigma-70	factor,	region	1.1
OAM_alpha	PF16552.5	gi|298675945|ref|YP_003727695.1|	-	0.18	11.7	0.3	8.2	6.4	0.0	2.5	3	0	0	3	3	3	0	D-ornithine	4,5-aminomutase	alpha-subunit
Aminotran_1_2	PF00155.21	gi|298675946|ref|YP_003727696.1|	-	1.2e-62	212.2	0.0	1.4e-62	212.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|298675946|ref|YP_003727696.1|	-	9.8e-12	44.8	0.0	1.6e-11	44.2	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.20	gi|298675946|ref|YP_003727696.1|	-	4.9e-06	25.3	0.0	1.4e-05	23.8	0.0	1.6	2	0	0	2	2	2	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.13	gi|298675946|ref|YP_003727696.1|	-	9.5e-06	24.7	0.0	6e-05	22.1	0.0	1.9	2	0	0	2	2	2	1	Allinase
Aminotran_5	PF00266.19	gi|298675946|ref|YP_003727696.1|	-	0.0016	17.5	0.0	0.0041	16.1	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class-V
RNase_H_2	PF13482.6	gi|298675947|ref|YP_003727697.1|	-	6.9e-34	117.2	0.4	1e-33	116.7	0.4	1.3	1	0	0	1	1	1	1	RNase_H	superfamily
DNA_pol_B_exo1	PF03104.19	gi|298675947|ref|YP_003727697.1|	-	0.0039	16.4	0.0	0.0053	16.0	0.0	1.3	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B_exo2	PF10108.9	gi|298675947|ref|YP_003727697.1|	-	0.066	12.9	0.0	3.5	7.3	0.0	2.2	2	0	0	2	2	2	0	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
UvrC_HhH_N	PF08459.11	gi|298675948|ref|YP_003727698.1|	-	2.7e-54	183.2	0.0	8.3e-54	181.7	0.0	1.9	2	0	0	2	2	2	1	UvrC	Helix-hairpin-helix	N-terminal
HHH_2	PF12826.7	gi|298675948|ref|YP_003727698.1|	-	1.4e-14	53.9	0.1	4.3e-14	52.3	0.1	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
GIY-YIG	PF01541.24	gi|298675948|ref|YP_003727698.1|	-	4.5e-12	46.1	0.4	4.6e-11	42.8	0.3	2.6	2	0	0	2	2	2	1	GIY-YIG	catalytic	domain
HHH_5	PF14520.6	gi|298675948|ref|YP_003727698.1|	-	1.2e-10	41.9	0.0	3.2e-10	40.5	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
UVR	PF02151.19	gi|298675948|ref|YP_003727698.1|	-	5e-10	38.8	2.8	1.2e-09	37.6	2.8	1.7	1	0	0	1	1	1	1	UvrB/uvrC	motif
HHH	PF00633.23	gi|298675948|ref|YP_003727698.1|	-	1.3e-06	27.9	0.0	0.0028	17.4	0.0	2.8	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|298675948|ref|YP_003727698.1|	-	0.0004	20.6	0.1	0.0027	17.9	0.0	2.2	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.20	gi|298675948|ref|YP_003727698.1|	-	0.0008	20.0	2.0	0.0027	18.3	0.0	2.9	3	0	0	3	3	3	1	5'-3'	exonuclease,	C-terminal	SAM	fold
GPI	PF06560.11	gi|298675949|ref|YP_003727699.1|	-	1.2e-46	158.2	3.3	1.5e-46	157.9	3.3	1.1	1	0	0	1	1	1	1	Glucose-6-phosphate	isomerase	(GPI)
Cupin_2	PF07883.11	gi|298675949|ref|YP_003727699.1|	-	0.00016	21.3	0.0	0.00029	20.5	0.0	1.4	1	0	0	1	1	1	1	Cupin	domain
TetR_C_27	PF17935.1	gi|298675949|ref|YP_003727699.1|	-	0.18	11.9	0.1	0.29	11.2	0.1	1.3	1	0	0	1	1	1	0	Tetracyclin	repressor-like,	C-terminal	domain
NRD1_2	PF01995.16	gi|298675950|ref|YP_003727700.1|	-	2.5e-98	328.1	3.0	2.8e-98	327.9	3.0	1.0	1	0	0	1	1	1	1	NrpR	regulatory	domains	NRD1	and	2
Aminotran_5	PF00266.19	gi|298675951|ref|YP_003727701.1|	-	4e-127	424.2	0.0	4.5e-127	424.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|298675951|ref|YP_003727701.1|	-	8.9e-12	45.0	0.5	1.5e-11	44.3	0.1	1.4	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.20	gi|298675951|ref|YP_003727701.1|	-	2.5e-08	32.9	0.0	4.5e-08	32.0	0.0	1.4	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.21	gi|298675951|ref|YP_003727701.1|	-	1.3e-07	31.1	0.0	8.4e-07	28.5	0.0	1.8	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|298675951|ref|YP_003727701.1|	-	5.2e-05	22.7	0.0	6.3e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
SHMT	PF00464.19	gi|298675951|ref|YP_003727701.1|	-	0.052	12.1	0.0	0.079	11.5	0.0	1.3	1	0	0	1	1	1	0	Serine	hydroxymethyltransferase
YcaO	PF02624.16	gi|298675953|ref|YP_003727703.1|	-	4.1e-83	279.3	0.0	6.6e-83	278.7	0.0	1.3	2	0	0	2	2	2	1	YcaO	cyclodehydratase,	ATP-ad	Mg2+-binding
PRAI	PF00697.22	gi|298675953|ref|YP_003727703.1|	-	0.017	14.9	0.0	0.044	13.6	0.0	1.7	1	0	0	1	1	1	0	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
MMR_HSR1_Xtn	PF16897.5	gi|298675953|ref|YP_003727703.1|	-	0.029	14.4	0.3	0.15	12.0	0.2	2.3	1	1	1	2	2	2	0	C-terminal	region	of	MMR_HSR1	domain
DUF4290	PF14123.6	gi|298675953|ref|YP_003727703.1|	-	0.039	13.5	0.1	0.075	12.6	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4290)
TfuA	PF07812.12	gi|298675954|ref|YP_003727704.1|	-	1.5e-47	160.2	0.0	2.1e-46	156.5	0.0	2.5	3	0	0	3	3	3	1	TfuA-like	protein
Regulator_TrmB	PF11495.8	gi|298675954|ref|YP_003727704.1|	-	0.038	13.2	0.0	7	5.8	0.0	2.2	2	0	0	2	2	2	0	Archaeal	transcriptional	regulator	TrmB
DUF2624	PF11116.8	gi|298675954|ref|YP_003727704.1|	-	0.11	13.4	5.4	0.15	13.0	0.8	2.8	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF2624)
Paired_CXXCH_1	PF09699.10	gi|298675955|ref|YP_003727705.1|	-	1.1e-10	41.1	25.6	8.3e-05	22.2	3.4	5.5	4	2	1	5	5	5	3	Doubled	CXXCH	motif	(Paired_CXXCH_1)
Cytochrome_C7	PF14522.6	gi|298675955|ref|YP_003727705.1|	-	1.2e-09	38.0	28.6	0.00061	19.7	7.9	4.9	1	1	4	5	5	5	5	Cytochrome	c7	and	related	cytochrome	c
Cytochrom_c3_2	PF14537.6	gi|298675955|ref|YP_003727705.1|	-	9.4e-09	35.6	26.7	0.00065	20.1	4.7	4.0	2	2	1	4	4	4	4	Cytochrome	c3
PGF-CTERM	PF18204.1	gi|298675955|ref|YP_003727705.1|	-	3.1e-08	33.3	0.1	4.5e-08	32.8	0.1	1.2	1	0	0	1	1	1	1	PGF-CTERM	motif
Cytochrom_NNT	PF03264.14	gi|298675955|ref|YP_003727705.1|	-	0.0025	17.5	27.0	1.4	8.6	2.7	5.6	1	1	2	3	3	3	2	NapC/NirT	cytochrome	c	family,	N-terminal	region
Cytochrome_C554	PF13435.6	gi|298675955|ref|YP_003727705.1|	-	0.0039	18.1	38.8	0.18	12.7	0.7	6.3	2	2	5	7	7	7	2	Cytochrome	c554	and	c-prime
SlyX	PF04102.12	gi|298675955|ref|YP_003727705.1|	-	0.085	13.5	2.8	0.19	12.4	1.6	2.1	2	0	0	2	2	2	0	SlyX
Cytochrom_C	PF00034.21	gi|298675955|ref|YP_003727705.1|	-	0.29	12.3	0.1	0.29	12.3	0.1	6.0	4	2	0	4	4	3	0	Cytochrome	c
zf-C4pol	PF14260.6	gi|298675955|ref|YP_003727705.1|	-	0.3	11.6	12.2	5	7.7	1.0	4.2	3	1	0	3	3	3	0	C4-type	zinc-finger	of	DNA	polymerase	delta
Cytochrome_CBB3	PF13442.6	gi|298675955|ref|YP_003727705.1|	-	0.52	10.7	28.3	1	9.7	0.0	6.9	3	2	2	5	5	4	0	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Cytochrom_CIII	PF02085.16	gi|298675955|ref|YP_003727705.1|	-	0.59	10.5	29.5	4.3	7.7	12.0	4.6	2	2	3	5	5	5	0	Class	III	cytochrome	C	family
DUF169	PF02596.15	gi|298675956|ref|YP_003727706.1|	-	8e-64	215.3	0.1	9e-64	215.2	0.1	1.0	1	0	0	1	1	1	1	Uncharacterised	ArCR,	COG2043
GYD	PF08734.11	gi|298675957|ref|YP_003727707.1|	-	3.8e-28	97.3	0.1	4.2e-28	97.1	0.1	1.0	1	0	0	1	1	1	1	GYD	domain
AsnC_trans_reg	PF01037.21	gi|298675957|ref|YP_003727707.1|	-	0.018	15.0	0.0	0.023	14.6	0.0	1.2	1	0	0	1	1	1	0	Lrp/AsnC	ligand	binding	domain
DUF3781	PF12636.7	gi|298675958|ref|YP_003727708.1|	-	0.016	15.1	0.3	0.067	13.1	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3781)
HhH-GPD	PF00730.25	gi|298675958|ref|YP_003727708.1|	-	0.047	14.1	0.0	0.081	13.4	0.0	1.4	1	0	0	1	1	1	0	HhH-GPD	superfamily	base	excision	DNA	repair	protein
ABC-3	PF00950.17	gi|298675959|ref|YP_003727709.1|	-	6.7e-81	271.6	28.4	7.6e-81	271.4	28.4	1.0	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.18	gi|298675959|ref|YP_003727709.1|	-	3.7e-12	45.9	20.2	3.7e-12	45.9	20.2	1.8	1	1	0	2	2	2	1	FecCD	transport	family
ABC_tran	PF00005.27	gi|298675960|ref|YP_003727710.1|	-	1.2e-28	100.4	0.0	1.6e-28	99.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298675960|ref|YP_003727710.1|	-	1.4e-14	54.7	1.6	1.3e-07	31.8	0.0	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|298675960|ref|YP_003727710.1|	-	2.6e-07	30.3	0.2	1.2e-06	28.1	0.2	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|298675960|ref|YP_003727710.1|	-	2.4e-06	27.5	0.0	0.0017	18.1	0.0	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA	PF00004.29	gi|298675960|ref|YP_003727710.1|	-	0.00015	22.2	0.2	0.53	10.7	0.0	2.1	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.6	gi|298675960|ref|YP_003727710.1|	-	0.0012	19.4	0.1	0.0022	18.5	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|298675960|ref|YP_003727710.1|	-	0.0029	17.3	0.1	0.013	15.2	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|298675960|ref|YP_003727710.1|	-	0.0054	16.7	0.1	0.096	12.6	0.0	2.0	2	0	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_29	PF13555.6	gi|298675960|ref|YP_003727710.1|	-	0.0091	15.7	0.1	0.018	14.7	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
T2SSE	PF00437.20	gi|298675960|ref|YP_003727710.1|	-	0.0095	15.0	0.0	0.02	14.0	0.0	1.5	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.6	gi|298675960|ref|YP_003727710.1|	-	0.015	15.6	0.1	0.22	11.8	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.6	gi|298675960|ref|YP_003727710.1|	-	0.015	15.5	0.4	0.48	10.7	0.1	2.4	2	1	0	2	2	1	0	Putative	exonuclease	SbcCD,	C	subunit
NACHT	PF05729.12	gi|298675960|ref|YP_003727710.1|	-	0.048	13.6	0.3	0.14	12.1	0.2	1.8	2	0	0	2	2	2	0	NACHT	domain
AAA_27	PF13514.6	gi|298675960|ref|YP_003727710.1|	-	0.053	13.1	0.0	0.09	12.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|298675960|ref|YP_003727710.1|	-	0.058	13.3	0.0	0.11	12.4	0.0	1.4	1	1	0	1	1	1	0	Rad17	P-loop	domain
Pox_A32	PF04665.12	gi|298675960|ref|YP_003727710.1|	-	0.095	12.1	0.0	0.17	11.3	0.0	1.3	1	0	0	1	1	1	0	Poxvirus	A32	protein
AAA_19	PF13245.6	gi|298675960|ref|YP_003727710.1|	-	0.099	13.0	0.4	0.74	10.1	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.6	gi|298675960|ref|YP_003727710.1|	-	0.14	12.2	0.1	5.6	7.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.15	gi|298675960|ref|YP_003727710.1|	-	0.16	11.8	0.1	0.36	10.7	0.1	1.5	1	0	0	1	1	1	0	NTPase
ZnuA	PF01297.17	gi|298675961|ref|YP_003727711.1|	-	1.6e-58	198.2	0.4	1.8e-58	198.0	0.4	1.0	1	0	0	1	1	1	1	Zinc-uptake	complex	component	A	periplasmic
Aminotran_MocR	PF12897.7	gi|298675961|ref|YP_003727711.1|	-	0.027	13.3	0.0	0.048	12.4	0.0	1.3	1	0	0	1	1	1	0	Alanine-glyoxylate	amino-transferase
SLAM	PF06214.11	gi|298675961|ref|YP_003727711.1|	-	0.15	12.1	1.9	0.95	9.5	0.1	2.3	2	0	0	2	2	2	0	Signaling	lymphocytic	activation	molecule	(SLAM)	protein
Conotoxin	PF02950.17	gi|298675961|ref|YP_003727711.1|	-	0.25	12.4	0.2	0.57	11.2	0.2	1.6	1	0	0	1	1	1	0	Conotoxin
Fe_dep_repr_C	PF02742.15	gi|298675962|ref|YP_003727712.1|	-	9.6e-19	67.2	0.1	1.6e-18	66.6	0.1	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.19	gi|298675962|ref|YP_003727712.1|	-	5.2e-13	49.0	0.0	7.5e-13	48.5	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR_2	PF12802.7	gi|298675962|ref|YP_003727712.1|	-	5.4e-09	35.8	0.0	1e-06	28.5	0.0	2.2	2	0	0	2	2	2	1	MarR	family
HTH_24	PF13412.6	gi|298675962|ref|YP_003727712.1|	-	1.3e-06	27.8	0.0	0.00018	21.0	0.0	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.6	gi|298675962|ref|YP_003727712.1|	-	3.3e-06	27.5	0.0	1e-05	25.9	0.0	1.7	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
MarR	PF01047.22	gi|298675962|ref|YP_003727712.1|	-	4.9e-06	26.4	0.0	9.6e-06	25.4	0.0	1.5	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|298675962|ref|YP_003727712.1|	-	2.7e-05	24.0	0.0	9.4e-05	22.2	0.0	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.12	gi|298675962|ref|YP_003727712.1|	-	0.00017	21.4	0.1	0.00062	19.7	0.0	1.8	2	0	0	2	2	2	1	HTH	domain
Rrf2	PF02082.20	gi|298675962|ref|YP_003727712.1|	-	0.00036	20.8	0.0	0.0006	20.1	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_DeoR	PF08220.12	gi|298675962|ref|YP_003727712.1|	-	0.00094	18.9	0.3	0.41	10.4	0.1	2.2	2	0	0	2	2	2	2	DeoR-like	helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|298675962|ref|YP_003727712.1|	-	0.0011	18.7	0.0	0.0023	17.7	0.0	1.6	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_micro	PF17007.5	gi|298675962|ref|YP_003727712.1|	-	0.0014	17.5	0.0	0.002	17.0	0.0	1.1	1	0	0	1	1	1	1	HTH-like
HTH_23	PF13384.6	gi|298675962|ref|YP_003727712.1|	-	0.0035	17.1	0.0	2.9	7.8	0.0	2.5	2	1	0	2	2	2	2	Homeodomain-like	domain
HTH_45	PF14947.6	gi|298675962|ref|YP_003727712.1|	-	0.0073	16.3	0.1	0.021	14.8	0.1	1.8	1	1	0	1	1	1	1	Winged	helix-turn-helix
RuvB_C	PF05491.13	gi|298675962|ref|YP_003727712.1|	-	0.0094	15.8	0.0	0.019	14.9	0.0	1.5	1	0	0	1	1	1	1	RuvB	C-terminal	winged	helix	domain
HTH_6	PF01418.17	gi|298675962|ref|YP_003727712.1|	-	0.01	15.8	0.0	1.8	8.6	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain,	rpiR	family
HTH_Crp_2	PF13545.6	gi|298675962|ref|YP_003727712.1|	-	0.014	15.3	0.0	0.042	13.8	0.0	1.7	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
A_thal_3526	PF09713.10	gi|298675962|ref|YP_003727712.1|	-	0.021	15.1	0.0	0.042	14.1	0.0	1.5	1	0	0	1	1	1	0	Plant	protein	1589	of	unknown	function	(A_thal_3526)
HTH_5	PF01022.20	gi|298675962|ref|YP_003727712.1|	-	0.023	14.6	0.0	0.15	12.0	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Topoisom_bac	PF01131.20	gi|298675962|ref|YP_003727712.1|	-	0.024	13.7	0.0	0.031	13.3	0.0	1.1	1	0	0	1	1	1	0	DNA	topoisomerase
FeoC	PF09012.10	gi|298675962|ref|YP_003727712.1|	-	0.024	14.7	0.0	0.11	12.5	0.0	2.0	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
HTH_36	PF13730.6	gi|298675962|ref|YP_003727712.1|	-	0.047	13.7	0.1	0.21	11.6	0.0	2.1	2	1	0	2	2	2	0	Helix-turn-helix	domain
YjcQ	PF09639.10	gi|298675962|ref|YP_003727712.1|	-	0.15	12.3	0.0	0.29	11.4	0.0	1.5	1	1	1	2	2	2	0	YjcQ	protein
HSP20	PF00011.21	gi|298675963|ref|YP_003727713.1|	-	0.00026	21.1	0.1	0.011	15.9	0.0	2.0	2	0	0	2	2	2	1	Hsp20/alpha	crystallin	family
CS	PF04969.16	gi|298675963|ref|YP_003727713.1|	-	0.02	15.9	0.1	0.041	14.9	0.1	1.5	1	1	0	1	1	1	0	CS	domain
ArsA_HSP20	PF17886.1	gi|298675963|ref|YP_003727713.1|	-	0.045	13.3	0.0	0.45	10.1	0.0	2.1	2	0	0	2	2	2	0	HSP20-like	domain	found	in	ArsA
GvpH	PF05455.11	gi|298675963|ref|YP_003727713.1|	-	0.12	12.4	0.0	0.13	12.3	0.0	1.1	1	0	0	1	1	1	0	GvpH
CS	PF04969.16	gi|298675964|ref|YP_003727714.1|	-	0.00018	22.5	0.9	0.0011	19.9	0.2	2.0	1	1	1	2	2	2	1	CS	domain
HSP20	PF00011.21	gi|298675964|ref|YP_003727714.1|	-	0.0002	21.4	0.3	0.0061	16.7	0.3	2.0	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|298675964|ref|YP_003727714.1|	-	0.00068	19.1	0.1	0.0034	16.9	0.1	2.0	1	1	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
PIH1_CS	PF18201.1	gi|298675964|ref|YP_003727714.1|	-	0.00077	19.8	0.0	0.00092	19.6	0.0	1.1	1	0	0	1	1	1	1	PIH1	CS-like	domain
GvpH	PF05455.11	gi|298675964|ref|YP_003727714.1|	-	0.14	12.2	0.0	0.19	11.8	0.0	1.2	1	0	0	1	1	1	0	GvpH
Fer4	PF00037.27	gi|298675965|ref|YP_003727715.1|	-	1.8e-12	46.5	14.3	8.4e-07	28.6	5.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298675965|ref|YP_003727715.1|	-	4.8e-11	42.6	6.2	5.8e-11	42.3	6.2	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298675965|ref|YP_003727715.1|	-	1.4e-08	35.2	7.9	2.4e-08	34.4	8.0	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675965|ref|YP_003727715.1|	-	1.7e-07	31.3	6.1	2.3e-07	30.8	6.1	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675965|ref|YP_003727715.1|	-	1.1e-06	29.5	5.4	0.00026	21.9	1.8	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.7	gi|298675965|ref|YP_003727715.1|	-	5.2e-06	27.0	12.2	0.00034	21.3	3.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298675965|ref|YP_003727715.1|	-	6.2e-06	26.1	14.2	0.0062	16.6	6.6	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675965|ref|YP_003727715.1|	-	7.8e-06	25.9	12.9	0.00031	20.8	13.0	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298675965|ref|YP_003727715.1|	-	0.00012	22.4	4.2	0.0054	17.1	0.7	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298675965|ref|YP_003727715.1|	-	0.00046	20.1	12.7	0.005	16.9	4.0	2.4	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|298675965|ref|YP_003727715.1|	-	0.0037	17.4	4.4	0.0037	17.4	4.4	2.0	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298675965|ref|YP_003727715.1|	-	0.0068	16.9	8.9	0.53	10.9	8.9	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298675965|ref|YP_003727715.1|	-	0.012	16.2	12.6	0.07	13.7	12.6	1.9	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|298675965|ref|YP_003727715.1|	-	0.014	15.8	4.2	0.014	15.8	4.2	2.5	2	1	0	2	2	2	0	4Fe-4S	binding	domain
ETF_QO	PF05187.13	gi|298675965|ref|YP_003727715.1|	-	0.14	12.3	2.2	0.14	12.3	2.2	1.1	1	0	0	1	1	1	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Fer4_15	PF13459.6	gi|298675965|ref|YP_003727715.1|	-	1.2	9.9	14.2	96	3.8	14.2	2.8	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
OrfB_Zn_ribbon	PF07282.11	gi|298675966|ref|YP_003727716.1|	-	1.2e-23	82.8	0.8	4.6e-23	80.9	0.1	2.4	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298675966|ref|YP_003727716.1|	-	0.0031	17.7	0.5	0.0066	16.7	0.5	1.5	1	0	0	1	1	1	1	Probable	transposase
Zn_ribbon_17	PF17120.5	gi|298675966|ref|YP_003727716.1|	-	0.031	13.9	0.9	0.058	13.0	0.9	1.5	1	0	0	1	1	1	0	Zinc-ribbon,	C4HC2	type
DUF501	PF04417.12	gi|298675966|ref|YP_003727716.1|	-	0.15	11.8	0.0	0.15	11.8	0.0	2.7	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF501)
HypA	PF01155.19	gi|298675966|ref|YP_003727716.1|	-	0.41	10.7	4.5	2.2	8.3	0.6	2.9	3	1	0	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
UPF0547	PF10571.9	gi|298675966|ref|YP_003727716.1|	-	0.61	10.2	3.2	8.7	6.5	0.5	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
TackOD1	PF18551.1	gi|298675966|ref|YP_003727716.1|	-	1.7	8.3	5.5	0.29	10.8	0.5	2.1	3	0	0	3	3	3	0	Thaumarchaeal	output	domain	1
DNA_RNApol_7kD	PF03604.13	gi|298675966|ref|YP_003727716.1|	-	7.3	6.4	9.1	2	8.2	2.3	2.9	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Lactamase_B	PF00753.27	gi|298675967|ref|YP_003727717.1|	-	2.8e-11	43.8	0.0	3.9e-11	43.3	0.0	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|298675967|ref|YP_003727717.1|	-	2.1e-09	37.2	0.0	2.6e-09	36.9	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|298675967|ref|YP_003727717.1|	-	0.0017	17.8	0.1	0.0037	16.7	0.1	1.6	1	1	1	2	2	2	1	Metallo-beta-lactamase	superfamily	domain
DUF1847	PF08901.11	gi|298675968|ref|YP_003727718.1|	-	2.8e-51	173.2	3.3	3.4e-51	173.0	3.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1847)
DUF188	PF02639.14	gi|298675968|ref|YP_003727718.1|	-	0.12	12.0	0.1	0.42	10.3	0.0	1.8	2	0	0	2	2	2	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
CbiA	PF01656.23	gi|298675969|ref|YP_003727719.1|	-	9.2e-14	51.6	0.0	1.2e-13	51.2	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4	PF00037.27	gi|298675969|ref|YP_003727719.1|	-	1.4e-11	43.7	11.3	1.2e-05	24.9	0.9	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
ParA	PF10609.9	gi|298675969|ref|YP_003727719.1|	-	2.6e-11	43.4	3.0	5.8e-06	25.9	0.1	2.9	3	1	0	3	3	2	2	NUBPL	iron-transfer	P-loop	NTPase
Fer4_7	PF12838.7	gi|298675969|ref|YP_003727719.1|	-	1.7e-07	31.7	3.7	0.002	18.7	0.2	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675969|ref|YP_003727719.1|	-	5.5e-07	30.4	3.3	0.004	18.1	0.1	2.7	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
AAA_31	PF13614.6	gi|298675969|ref|YP_003727719.1|	-	1.8e-06	28.0	0.4	0.028	14.3	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
Fer4_4	PF12800.7	gi|298675969|ref|YP_003727719.1|	-	9.6e-06	25.7	9.9	0.0078	16.6	0.9	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298675969|ref|YP_003727719.1|	-	1.6e-05	24.7	13.6	0.011	15.7	1.4	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675969|ref|YP_003727719.1|	-	0.00011	22.2	9.2	0.00011	22.2	9.2	2.2	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298675969|ref|YP_003727719.1|	-	0.00017	21.7	9.8	0.0018	18.4	10.7	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_NifH	PF00142.18	gi|298675969|ref|YP_003727719.1|	-	0.00026	20.5	4.1	0.066	12.6	0.1	2.7	2	1	1	3	3	3	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
Fer4_2	PF12797.7	gi|298675969|ref|YP_003727719.1|	-	0.00037	20.4	11.9	0.051	13.7	2.0	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
RsgA_GTPase	PF03193.16	gi|298675969|ref|YP_003727719.1|	-	0.00046	20.1	0.9	1.2	9.0	0.1	2.6	2	1	1	3	3	3	2	RsgA	GTPase
Fer4_10	PF13237.6	gi|298675969|ref|YP_003727719.1|	-	0.00087	19.4	10.2	0.0065	16.6	11.1	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
PhoH	PF02562.16	gi|298675969|ref|YP_003727719.1|	-	0.0027	17.2	0.8	0.52	9.7	0.5	2.2	2	0	0	2	2	2	1	PhoH-like	protein
AAA_24	PF13479.6	gi|298675969|ref|YP_003727719.1|	-	0.0028	17.4	0.1	0.0066	16.2	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
Fer4_8	PF13183.6	gi|298675969|ref|YP_003727719.1|	-	0.0031	17.9	6.8	0.59	10.6	0.1	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
AAA_16	PF13191.6	gi|298675969|ref|YP_003727719.1|	-	0.0039	17.6	0.0	0.024	15.0	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
Fer4_17	PF13534.6	gi|298675969|ref|YP_003727719.1|	-	0.0046	17.5	11.3	0.27	11.8	2.6	2.5	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
ArsA_ATPase	PF02374.15	gi|298675969|ref|YP_003727719.1|	-	0.0088	15.3	0.3	0.023	13.9	0.3	1.6	1	0	0	1	1	1	1	Anion-transporting	ATPase
RuvB_N	PF05496.12	gi|298675969|ref|YP_003727719.1|	-	0.0091	15.7	0.0	0.37	10.5	0.0	2.3	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
DUF2075	PF09848.9	gi|298675969|ref|YP_003727719.1|	-	0.0094	15.2	0.3	0.33	10.1	0.0	2.1	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_30	PF13604.6	gi|298675969|ref|YP_003727719.1|	-	0.013	15.2	0.1	0.14	11.9	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.6	gi|298675969|ref|YP_003727719.1|	-	0.017	15.4	0.0	0.3	11.3	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|298675969|ref|YP_003727719.1|	-	0.025	15.1	0.1	0.2	12.2	0.0	2.2	2	0	0	2	2	2	0	ABC	transporter
Fer4_3	PF12798.7	gi|298675969|ref|YP_003727719.1|	-	0.027	15.4	13.0	0.56	11.3	3.8	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
FTHFS	PF01268.19	gi|298675969|ref|YP_003727719.1|	-	0.029	12.6	0.0	0.048	11.9	0.0	1.2	1	0	0	1	1	1	0	Formate--tetrahydrofolate	ligase
NB-ARC	PF00931.22	gi|298675969|ref|YP_003727719.1|	-	0.041	13.1	0.4	1.5	7.9	0.2	2.2	2	0	0	2	2	2	0	NB-ARC	domain
AAA_11	PF13086.6	gi|298675969|ref|YP_003727719.1|	-	0.046	13.5	0.0	5.5	6.7	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.29	gi|298675969|ref|YP_003727719.1|	-	0.058	13.8	0.1	1.1	9.6	0.0	2.3	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.6	gi|298675969|ref|YP_003727719.1|	-	0.077	12.7	0.2	0.2	11.3	0.1	1.7	1	1	0	2	2	2	0	AAA	ATPase	domain
CBP_BcsQ	PF06564.12	gi|298675969|ref|YP_003727719.1|	-	0.078	12.4	0.0	12	5.3	0.0	2.1	2	0	0	2	2	2	0	Cellulose	biosynthesis	protein	BcsQ
ATPase	PF06745.13	gi|298675969|ref|YP_003727719.1|	-	0.081	12.3	1.1	0.55	9.5	0.2	2.2	2	0	0	2	2	2	0	KaiC
AAA_18	PF13238.6	gi|298675969|ref|YP_003727719.1|	-	0.099	13.2	0.8	1	9.9	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|298675969|ref|YP_003727719.1|	-	0.1	12.4	0.1	1.5	8.5	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
TsaE	PF02367.17	gi|298675969|ref|YP_003727719.1|	-	0.12	12.4	0.2	2.8	7.9	0.1	2.5	2	1	1	3	3	3	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_23	PF13476.6	gi|298675969|ref|YP_003727719.1|	-	0.14	12.7	0.1	0.25	11.8	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_13	PF13166.6	gi|298675969|ref|YP_003727719.1|	-	0.18	10.4	0.0	0.23	10.1	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|298675969|ref|YP_003727719.1|	-	0.21	11.5	0.0	0.58	10.1	0.0	1.7	2	0	0	2	2	1	0	NACHT	domain
AAA_28	PF13521.6	gi|298675969|ref|YP_003727719.1|	-	0.34	11.1	0.2	0.34	11.1	0.2	1.7	2	0	0	2	2	1	0	AAA	domain
AAA_25	PF13481.6	gi|298675969|ref|YP_003727719.1|	-	0.41	10.2	2.4	0.59	9.7	1.3	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.6	gi|298675969|ref|YP_003727719.1|	-	0.53	10.1	4.0	0.6	9.9	0.5	2.5	3	0	0	3	3	2	0	P-loop	containing	region	of	AAA	domain
Fer4_13	PF13370.6	gi|298675969|ref|YP_003727719.1|	-	3.2	8.4	9.1	10	6.8	0.8	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
CbiA	PF01656.23	gi|298675970|ref|YP_003727720.1|	-	2.1e-19	69.8	0.0	2.7e-19	69.5	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.9	gi|298675970|ref|YP_003727720.1|	-	2.3e-16	60.0	0.1	7.3e-08	32.2	0.0	2.9	2	1	0	2	2	2	2	NUBPL	iron-transfer	P-loop	NTPase
AAA_31	PF13614.6	gi|298675970|ref|YP_003727720.1|	-	6.3e-09	36.0	0.2	4.4e-06	26.7	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
Fer4	PF00037.27	gi|298675970|ref|YP_003727720.1|	-	1.3e-08	34.3	13.0	4.5e-06	26.2	3.0	3.2	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298675970|ref|YP_003727720.1|	-	1.8e-06	28.0	8.0	3.9e-06	26.9	8.0	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298675970|ref|YP_003727720.1|	-	3.2e-06	28.0	7.6	0.0022	18.9	0.5	2.8	2	1	1	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|298675970|ref|YP_003727720.1|	-	4.5e-06	27.2	6.4	0.014	16.0	0.1	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
AAA_26	PF13500.6	gi|298675970|ref|YP_003727720.1|	-	5.5e-05	23.1	0.2	0.0015	18.4	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
Fer4_9	PF13187.6	gi|298675970|ref|YP_003727720.1|	-	8.8e-05	22.6	12.3	0.00016	21.8	10.3	2.4	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298675970|ref|YP_003727720.1|	-	0.00013	22.0	13.3	0.006	16.7	0.7	3.0	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_NifH	PF00142.18	gi|298675970|ref|YP_003727720.1|	-	0.0014	18.1	1.3	1.2	8.5	0.0	2.8	3	0	0	3	3	3	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.15	gi|298675970|ref|YP_003727720.1|	-	0.0023	17.2	0.1	0.0058	15.8	0.1	1.7	1	0	0	1	1	1	1	Anion-transporting	ATPase
Fer4_6	PF12837.7	gi|298675970|ref|YP_003727720.1|	-	0.0081	16.2	20.8	0.036	14.1	3.3	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|298675970|ref|YP_003727720.1|	-	0.057	13.9	7.8	1.7	9.2	0.9	2.6	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298675970|ref|YP_003727720.1|	-	0.067	14.0	4.7	5.2	8.0	0.7	2.5	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
MipZ	PF09140.11	gi|298675970|ref|YP_003727720.1|	-	0.083	12.2	0.0	0.11	11.7	0.0	1.2	1	0	0	1	1	1	0	ATPase	MipZ
AAA_25	PF13481.6	gi|298675970|ref|YP_003727720.1|	-	0.093	12.3	0.0	0.14	11.7	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
PhoH	PF02562.16	gi|298675970|ref|YP_003727720.1|	-	0.12	11.8	0.1	0.22	11.0	0.1	1.4	1	0	0	1	1	1	0	PhoH-like	protein
Fer4_15	PF13459.6	gi|298675970|ref|YP_003727720.1|	-	0.18	12.6	5.3	3.2	8.6	1.3	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|298675970|ref|YP_003727720.1|	-	0.24	11.9	13.5	0.24	11.9	2.5	2.6	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298675970|ref|YP_003727720.1|	-	1.6	9.5	17.5	1.2	9.8	3.8	3.1	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|298675970|ref|YP_003727720.1|	-	9.5	6.6	17.0	0.39	10.9	1.9	3.3	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Nitro_FeMo-Co	PF02579.17	gi|298675971|ref|YP_003727721.1|	-	1.3e-21	76.7	0.0	1.7e-21	76.3	0.0	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
Nitro_FeMo-Co	PF02579.17	gi|298675972|ref|YP_003727722.1|	-	2e-22	79.4	0.0	2.3e-22	79.1	0.0	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
DUF134	PF02001.16	gi|298675973|ref|YP_003727723.1|	-	1.1e-22	80.4	0.1	1.2e-22	80.3	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF134
Sigma70_r4_2	PF08281.12	gi|298675973|ref|YP_003727723.1|	-	2.4e-05	23.9	0.1	3.3e-05	23.5	0.1	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
Sigma70_r4	PF04545.16	gi|298675973|ref|YP_003727723.1|	-	0.0003	20.3	0.3	0.00045	19.7	0.3	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_10	PF04967.12	gi|298675973|ref|YP_003727723.1|	-	0.0026	17.5	0.3	0.0059	16.4	0.0	1.7	2	0	0	2	2	2	1	HTH	DNA	binding	domain
Sigma70_ECF	PF07638.11	gi|298675973|ref|YP_003727723.1|	-	0.0088	15.9	0.6	0.0099	15.8	0.6	1.1	1	0	0	1	1	1	1	ECF	sigma	factor
KORA	PF16509.5	gi|298675973|ref|YP_003727723.1|	-	0.014	15.7	0.2	0.017	15.4	0.2	1.2	1	0	0	1	1	1	0	TrfB	plasmid	transcriptional	repressor
HTH_11	PF08279.12	gi|298675973|ref|YP_003727723.1|	-	0.015	15.2	0.0	0.02	14.8	0.0	1.3	1	0	0	1	1	1	0	HTH	domain
HTH_1	PF00126.27	gi|298675973|ref|YP_003727723.1|	-	0.017	15.1	0.0	0.019	14.9	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_23	PF13384.6	gi|298675973|ref|YP_003727723.1|	-	0.019	14.8	0.0	0.025	14.4	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_3	PF01381.22	gi|298675973|ref|YP_003727723.1|	-	0.019	15.0	0.2	0.03	14.4	0.2	1.4	1	0	0	1	1	1	0	Helix-turn-helix
HTH_29	PF13551.6	gi|298675973|ref|YP_003727723.1|	-	0.075	13.1	0.0	0.11	12.6	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
ParA	PF10609.9	gi|298675974|ref|YP_003727724.1|	-	3.7e-97	324.6	0.0	4.3e-97	324.4	0.0	1.0	1	0	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|298675974|ref|YP_003727724.1|	-	2.7e-14	53.3	0.0	4e-14	52.8	0.0	1.5	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|298675974|ref|YP_003727724.1|	-	1.4e-10	41.4	0.1	4.6e-09	36.4	0.1	2.2	1	1	0	1	1	1	1	AAA	domain
MipZ	PF09140.11	gi|298675974|ref|YP_003727724.1|	-	1.1e-08	34.7	0.0	1.6e-08	34.2	0.0	1.3	1	0	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.15	gi|298675974|ref|YP_003727724.1|	-	2.8e-08	33.3	0.0	1.3e-07	31.1	0.0	1.9	1	1	1	2	2	2	1	Anion-transporting	ATPase
AAA_26	PF13500.6	gi|298675974|ref|YP_003727724.1|	-	0.00023	21.0	0.2	0.065	13.1	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
CLP1_P	PF16575.5	gi|298675974|ref|YP_003727724.1|	-	0.00061	19.6	0.0	0.0011	18.9	0.0	1.4	1	0	0	1	1	1	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
MeaB	PF03308.16	gi|298675974|ref|YP_003727724.1|	-	0.00065	18.8	0.6	0.0032	16.5	0.1	2.0	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
APS_kinase	PF01583.20	gi|298675974|ref|YP_003727724.1|	-	0.00076	19.4	0.0	0.0013	18.7	0.0	1.4	1	0	0	1	1	1	1	Adenylylsulphate	kinase
Fer4_NifH	PF00142.18	gi|298675974|ref|YP_003727724.1|	-	0.00092	18.7	0.0	0.013	15.0	0.1	2.1	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_25	PF13481.6	gi|298675974|ref|YP_003727724.1|	-	0.0011	18.6	0.0	0.03	13.9	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
VirC1	PF07015.11	gi|298675974|ref|YP_003727724.1|	-	0.0038	16.6	0.0	0.0055	16.0	0.0	1.2	1	0	0	1	1	1	1	VirC1	protein
CBP_BcsQ	PF06564.12	gi|298675974|ref|YP_003727724.1|	-	0.0053	16.3	0.0	0.083	12.4	0.0	2.0	2	0	0	2	2	2	1	Cellulose	biosynthesis	protein	BcsQ
RsgA_GTPase	PF03193.16	gi|298675974|ref|YP_003727724.1|	-	0.0077	16.2	0.2	0.013	15.4	0.2	1.3	1	0	0	1	1	1	1	RsgA	GTPase
Zeta_toxin	PF06414.12	gi|298675974|ref|YP_003727724.1|	-	0.0083	15.4	0.2	0.019	14.2	0.0	1.6	2	0	0	2	2	2	1	Zeta	toxin
SRP54	PF00448.22	gi|298675974|ref|YP_003727724.1|	-	0.0087	15.7	0.0	0.014	15.0	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
MobB	PF03205.14	gi|298675974|ref|YP_003727724.1|	-	0.011	15.6	0.0	0.02	14.8	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NB-ARC	PF00931.22	gi|298675974|ref|YP_003727724.1|	-	0.012	14.8	0.3	0.024	13.8	0.3	1.4	1	0	0	1	1	1	0	NB-ARC	domain
NTPase_1	PF03266.15	gi|298675974|ref|YP_003727724.1|	-	0.032	14.2	0.3	0.082	12.8	0.0	1.7	2	0	0	2	2	2	0	NTPase
RNA_helicase	PF00910.22	gi|298675974|ref|YP_003727724.1|	-	0.056	13.8	0.0	0.15	12.5	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
AAA_18	PF13238.6	gi|298675974|ref|YP_003727724.1|	-	0.064	13.8	0.0	0.12	13.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|298675974|ref|YP_003727724.1|	-	0.067	13.6	0.1	0.11	12.8	0.1	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
IstB_IS21	PF01695.17	gi|298675974|ref|YP_003727724.1|	-	0.093	12.5	0.0	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
NACHT	PF05729.12	gi|298675974|ref|YP_003727724.1|	-	0.11	12.4	0.2	0.17	11.8	0.2	1.2	1	0	0	1	1	1	0	NACHT	domain
KTI12	PF08433.10	gi|298675974|ref|YP_003727724.1|	-	0.13	11.7	0.0	0.2	11.1	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_30	PF13604.6	gi|298675974|ref|YP_003727724.1|	-	0.14	11.9	0.1	0.24	11.1	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|298675974|ref|YP_003727724.1|	-	0.14	12.6	0.1	0.24	11.9	0.1	1.4	1	0	0	1	1	1	0	ABC	transporter
DUF87	PF01935.17	gi|298675974|ref|YP_003727724.1|	-	0.14	12.2	0.4	0.25	11.4	0.4	1.4	1	0	0	1	1	1	0	Helicase	HerA,	central	domain
LpxK	PF02606.14	gi|298675974|ref|YP_003727724.1|	-	0.2	10.7	0.1	0.66	9.0	0.0	1.7	2	0	0	2	2	2	0	Tetraacyldisaccharide-1-P	4'-kinase
DUF169	PF02596.15	gi|298675975|ref|YP_003727725.1|	-	7.9e-56	189.2	0.0	9e-56	189.1	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ArCR,	COG2043
Peptidase_M24	PF00557.24	gi|298675976|ref|YP_003727726.1|	-	3.5e-38	131.4	0.0	4.1e-38	131.2	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Peptidase_M24	PF00557.24	gi|298675977|ref|YP_003727727.1|	-	1.3e-47	162.2	0.0	1.7e-47	161.9	0.0	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Sld3_N	PF18523.1	gi|298675978|ref|YP_003727728.1|	-	0.011	15.9	0.3	0.012	15.7	0.3	1.1	1	0	0	1	1	1	0	Sld3	N-terminal	domain
PAS_4	PF08448.10	gi|298675979|ref|YP_003727729.1|	-	2.7e-41	140.2	0.0	1.2e-19	70.6	0.0	4.4	4	0	0	4	4	4	3	PAS	fold
PAS_9	PF13426.7	gi|298675979|ref|YP_003727729.1|	-	2.8e-34	117.5	10.3	7.7e-12	45.4	0.2	5.4	6	1	0	6	6	6	3	PAS	domain
HisKA_2	PF07568.12	gi|298675979|ref|YP_003727729.1|	-	1.6e-30	105.0	7.6	3.2e-30	104.0	3.2	3.3	2	0	0	2	2	2	1	Histidine	kinase
PAS	PF00989.25	gi|298675979|ref|YP_003727729.1|	-	5.5e-30	103.7	0.0	1.2e-07	31.7	0.0	4.7	4	0	0	4	4	4	4	PAS	fold
PAS_3	PF08447.12	gi|298675979|ref|YP_003727729.1|	-	8.4e-26	90.1	0.0	2.5e-15	56.5	0.0	5.0	4	1	0	4	4	4	3	PAS	fold
PAS_8	PF13188.7	gi|298675979|ref|YP_003727729.1|	-	2.4e-12	46.6	0.0	0.00041	20.3	0.0	4.1	4	0	0	4	4	4	2	PAS	domain
HATPase_c	PF02518.26	gi|298675979|ref|YP_003727729.1|	-	1.1e-09	38.8	1.2	4.9e-09	36.7	0.4	2.5	2	1	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HWE_HK	PF07536.14	gi|298675979|ref|YP_003727729.1|	-	4.3e-07	30.5	0.1	1.5e-06	28.8	0.1	2.0	1	0	0	1	1	1	1	HWE	histidine	kinase
PAS_10	PF13596.6	gi|298675979|ref|YP_003727729.1|	-	1.3e-05	25.7	2.5	0.053	14.1	0.0	4.4	4	1	0	4	4	4	2	PAS	domain
HATPase_c_2	PF13581.6	gi|298675979|ref|YP_003727729.1|	-	0.00038	20.4	0.0	0.00086	19.3	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
DUF572	PF04502.13	gi|298675979|ref|YP_003727729.1|	-	0.0077	15.9	0.7	0.021	14.4	0.7	1.7	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF572)
HATPase_c_3	PF13589.6	gi|298675979|ref|YP_003727729.1|	-	0.011	15.5	0.2	0.046	13.5	0.2	2.0	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
sCache_3_3	PF17202.4	gi|298675979|ref|YP_003727729.1|	-	0.02	15.3	0.0	14	6.2	0.0	3.3	3	0	0	3	3	3	0	Single	cache	domain	3
sCache_3_2	PF17203.4	gi|298675979|ref|YP_003727729.1|	-	0.096	12.8	0.4	13	5.9	0.0	3.2	3	0	0	3	3	3	0	Single	cache	domain	3
Phage_GPO	PF05929.11	gi|298675979|ref|YP_003727729.1|	-	0.11	12.1	2.4	0.49	10.0	0.1	2.6	2	0	0	2	2	2	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
DUF3450	PF11932.8	gi|298675979|ref|YP_003727729.1|	-	0.46	9.8	5.5	1	8.6	5.5	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
Cache_3-Cache_2	PF17201.4	gi|298675979|ref|YP_003727729.1|	-	1.8	7.8	6.6	2.5	7.3	0.1	3.0	2	1	1	3	3	3	0	Cache	3/Cache	2	fusion	domain
Atrophin-1	PF03154.15	gi|298675979|ref|YP_003727729.1|	-	7.7	4.7	4.4	12	4.1	4.4	1.1	1	0	0	1	1	1	0	Atrophin-1	family
tRNA_deacylase	PF04414.12	gi|298675980|ref|YP_003727730.1|	-	1.1e-69	234.0	0.0	3.1e-69	232.6	0.0	1.6	2	0	0	2	2	2	1	D-aminoacyl-tRNA	deacylase
CPV_Polyhedrin	PF17515.2	gi|298675980|ref|YP_003727730.1|	-	0.43	9.9	5.9	0.53	9.6	0.5	2.6	2	1	1	3	3	3	0	Cypovirus	polyhedrin
Tubulin	PF00091.25	gi|298675981|ref|YP_003727731.1|	-	3.6e-41	141.5	0.4	5.4e-41	141.0	0.4	1.3	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|298675981|ref|YP_003727731.1|	-	1.2e-33	115.3	0.6	3.4e-33	113.8	0.6	1.9	1	0	0	1	1	1	1	FtsZ	family,	C-terminal	domain
NAD_binding_10	PF13460.6	gi|298675981|ref|YP_003727731.1|	-	0.00086	19.2	0.1	0.0025	17.7	0.1	1.7	1	0	0	1	1	1	1	NAD(P)H-binding
CENP-X	PF09415.10	gi|298675981|ref|YP_003727731.1|	-	0.077	13.3	0.4	0.25	11.7	0.4	1.9	1	0	0	1	1	1	0	CENP-S	associating	Centromere	protein	X
Tubulin_2	PF13809.6	gi|298675981|ref|YP_003727731.1|	-	4.6	6.3	7.9	23	4.0	7.8	2.1	1	1	0	1	1	1	0	Tubulin	like
SecE	PF00584.20	gi|298675982|ref|YP_003727732.1|	-	4.1e-05	23.4	0.1	4.2e-05	23.4	0.1	1.1	1	0	0	1	1	1	1	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Spt5-NGN	PF03439.13	gi|298675983|ref|YP_003727733.1|	-	9.9e-24	83.1	0.2	1.5e-23	82.5	0.2	1.3	1	0	0	1	1	1	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.29	gi|298675983|ref|YP_003727733.1|	-	1.6e-06	27.8	1.1	3.5e-05	23.6	0.2	2.7	2	0	0	2	2	2	1	KOW	motif
Ribosomal_L11_N	PF03946.14	gi|298675984|ref|YP_003727734.1|	-	1.7e-24	85.4	2.5	1.8e-24	85.3	1.2	1.7	2	0	0	2	2	2	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.19	gi|298675984|ref|YP_003727734.1|	-	3.6e-18	65.8	0.5	6e-18	65.1	0.1	1.5	2	0	0	2	2	2	1	Ribosomal	protein	L11,	RNA	binding	domain
Ribosomal_L1	PF00687.21	gi|298675985|ref|YP_003727735.1|	-	1.4e-49	168.6	0.0	1.8e-49	168.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Ribosomal_L10	PF00466.20	gi|298675986|ref|YP_003727736.1|	-	1e-25	89.8	0.2	2.1e-25	88.8	0.1	1.6	2	0	0	2	2	2	1	Ribosomal	protein	L10
RL10P_insert	PF17777.1	gi|298675986|ref|YP_003727736.1|	-	2.4e-19	69.1	0.0	6.1e-19	67.8	0.0	1.7	1	0	0	1	1	1	1	Insertion	domain	in	60S	ribosomal	protein	L10P
Ribosomal_60s	PF00428.19	gi|298675986|ref|YP_003727736.1|	-	9.8e-08	32.5	2.4	2.3e-07	31.3	2.4	1.7	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
HSP90	PF00183.18	gi|298675986|ref|YP_003727736.1|	-	2.6	6.8	7.3	2.3	7.0	0.0	2.2	2	0	0	2	2	2	0	Hsp90	protein
Ribosomal_60s	PF00428.19	gi|298675987|ref|YP_003727737.1|	-	4.8e-19	68.7	16.2	5.7e-19	68.5	16.2	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
EF-hand_14	PF17959.1	gi|298675987|ref|YP_003727737.1|	-	0.0056	17.0	0.0	0.0096	16.2	0.0	1.4	1	0	0	1	1	1	1	EF-hand	domain
DUF348	PF03990.14	gi|298675987|ref|YP_003727737.1|	-	0.01	15.5	0.6	0.018	14.8	0.6	1.4	1	1	0	1	1	1	0	G5-linked-Ubiquitin-like	domain
PhetRS_B1	PF18262.1	gi|298675987|ref|YP_003727737.1|	-	0.018	15.2	0.0	0.018	15.2	0.0	1.7	2	0	0	2	2	2	0	Phe-tRNA	synthetase	beta	subunit	B1	domain
HTH_Tnp_Tc3_2	PF01498.18	gi|298675987|ref|YP_003727737.1|	-	0.047	13.9	0.0	0.067	13.5	0.0	1.2	1	0	0	1	1	1	0	Transposase
HD	PF01966.22	gi|298675987|ref|YP_003727737.1|	-	0.095	12.9	0.3	0.11	12.7	0.3	1.4	1	1	0	1	1	1	0	HD	domain
DUF4632	PF15451.6	gi|298675987|ref|YP_003727737.1|	-	5.3	7.2	6.4	9.2	6.4	6.4	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4632)
HIT	PF01230.23	gi|298675988|ref|YP_003727738.1|	-	6.5e-30	103.8	0.0	8.2e-30	103.4	0.0	1.1	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.8	gi|298675988|ref|YP_003727738.1|	-	2.1e-15	57.2	0.0	2.6e-15	56.9	0.0	1.2	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
DUF1441	PF07278.11	gi|298675988|ref|YP_003727738.1|	-	0.012	15.6	0.0	0.017	15.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1441)
CwfJ_C_1	PF04677.15	gi|298675988|ref|YP_003727738.1|	-	0.03	14.2	0.1	0.053	13.4	0.1	1.4	1	1	0	1	1	1	0	Protein	similar	to	CwfJ	C-terminus	1
TPR_1	PF00515.28	gi|298675989|ref|YP_003727739.1|	-	2.9e-95	308.5	41.2	3.2e-10	39.4	0.0	12.1	12	0	0	12	12	12	12	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|298675989|ref|YP_003727739.1|	-	1.9e-75	243.0	36.7	1.3e-07	31.2	0.3	12.1	12	0	0	12	12	12	11	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|298675989|ref|YP_003727739.1|	-	1.3e-62	202.8	44.7	4.3e-07	29.6	0.0	12.2	12	0	0	12	12	12	12	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|298675989|ref|YP_003727739.1|	-	1.1e-60	201.0	43.2	1.9e-10	40.3	1.7	11.2	2	1	9	11	11	11	11	TPR	repeat
TPR_17	PF13431.6	gi|298675989|ref|YP_003727739.1|	-	4.1e-46	152.1	31.4	3.1e-05	24.1	0.3	10.8	11	0	0	11	11	10	10	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|298675989|ref|YP_003727739.1|	-	9.2e-46	150.6	1.4	0.0013	19.4	0.0	11.2	1	1	10	11	11	11	10	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|298675989|ref|YP_003727739.1|	-	1.7e-40	137.4	1.3	8.7e-07	29.5	0.0	7.6	3	2	5	9	9	9	8	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|298675989|ref|YP_003727739.1|	-	1.8e-38	130.7	21.7	4.8e-07	30.0	0.5	8.7	3	2	5	8	8	8	8	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|298675989|ref|YP_003727739.1|	-	3.3e-33	114.0	12.6	6e-05	23.5	0.0	7.1	6	1	1	7	7	7	7	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|298675989|ref|YP_003727739.1|	-	3.2e-31	107.3	0.0	0.00015	21.8	0.0	7.2	1	1	6	9	9	9	9	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|298675989|ref|YP_003727739.1|	-	1.3e-18	66.3	21.2	0.84	10.4	0.2	11.2	12	0	0	12	12	11	4	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|298675989|ref|YP_003727739.1|	-	1.7e-16	58.9	15.9	0.41	10.8	0.0	10.4	11	1	1	12	12	10	3	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|298675989|ref|YP_003727739.1|	-	2.5e-13	50.0	24.0	0.0025	18.0	0.2	6.0	3	2	3	6	6	6	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_10	PF13374.6	gi|298675989|ref|YP_003727739.1|	-	3.3e-13	49.0	14.8	0.097	12.6	0.0	9.2	10	0	0	10	10	9	3	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|298675989|ref|YP_003727739.1|	-	6.8e-12	45.2	8.2	0.00076	18.8	0.1	4.7	2	1	2	4	4	4	4	Tetratricopeptide	repeat
MIT	PF04212.18	gi|298675989|ref|YP_003727739.1|	-	5e-11	42.5	27.6	0.13	12.3	0.1	10.8	9	3	3	12	12	11	2	MIT	(microtubule	interacting	and	transport)	domain
DUF3856	PF12968.7	gi|298675989|ref|YP_003727739.1|	-	1.2e-10	41.7	11.7	0.033	14.2	0.1	7.5	1	1	8	9	9	9	3	Domain	of	Unknown	Function	(DUF3856)
NARP1	PF12569.8	gi|298675989|ref|YP_003727739.1|	-	1.9e-10	40.3	17.6	0.0011	18.0	0.3	5.7	1	1	6	7	7	7	3	NMDA	receptor-regulated	protein	1
SRP_TPR_like	PF17004.5	gi|298675989|ref|YP_003727739.1|	-	1.7e-09	37.7	14.8	0.017	15.1	4.2	5.3	1	1	5	6	6	6	4	Putative	TPR-like	repeat
Fis1_TPR_C	PF14853.6	gi|298675989|ref|YP_003727739.1|	-	5.1e-08	32.9	17.4	0.77	9.9	0.1	7.9	7	1	1	8	8	8	3	Fis1	C-terminal	tetratricopeptide	repeat
ChAPs	PF09295.10	gi|298675989|ref|YP_003727739.1|	-	1.2e-05	24.5	9.0	0.0031	16.6	0.9	4.5	1	1	3	5	5	5	1	ChAPs	(Chs5p-Arf1p-binding	proteins)
BTAD	PF03704.17	gi|298675989|ref|YP_003727739.1|	-	1.3e-05	25.7	4.2	2.4	8.6	0.0	5.1	3	3	2	5	5	5	1	Bacterial	transcriptional	activator	domain
TPR_21	PF09976.9	gi|298675989|ref|YP_003727739.1|	-	0.00026	20.8	8.0	3.4	7.3	0.2	5.7	1	1	5	6	6	6	1	Tetratricopeptide	repeat-like	domain
SHNi-TPR	PF10516.9	gi|298675989|ref|YP_003727739.1|	-	0.0004	19.8	13.7	5.4	6.5	0.1	7.2	7	0	0	7	7	7	0	SHNi-TPR
ANAPC5	PF12862.7	gi|298675989|ref|YP_003727739.1|	-	0.00041	20.4	6.9	4.1	7.5	0.0	5.6	3	2	1	5	5	5	1	Anaphase-promoting	complex	subunit	5
HTH_Bact	PF18768.1	gi|298675989|ref|YP_003727739.1|	-	0.00053	19.5	12.1	13	5.4	0.0	7.8	8	1	1	9	9	8	0	Helix-turn-helix	bacterial	domain
FAD_binding_4	PF01565.23	gi|298675989|ref|YP_003727739.1|	-	0.00074	19.3	0.0	20	4.9	0.0	5.3	2	2	3	6	6	6	0	FAD	binding	domain
PPTA	PF01239.22	gi|298675989|ref|YP_003727739.1|	-	0.0012	18.5	9.4	1.4	8.8	0.1	5.1	4	0	0	4	4	4	1	Protein	prenyltransferase	alpha	subunit	repeat
TPR_20	PF14561.6	gi|298675989|ref|YP_003727739.1|	-	0.0031	17.8	3.2	2.6	8.5	0.1	4.2	3	2	1	4	4	4	1	Tetratricopeptide	repeat
Coatomer_E	PF04733.14	gi|298675989|ref|YP_003727739.1|	-	0.021	14.2	8.2	0.12	11.7	1.0	3.9	3	2	1	4	4	4	0	Coatomer	epsilon	subunit
DUF1510	PF07423.11	gi|298675989|ref|YP_003727739.1|	-	0.14	12.3	5.8	61	3.9	0.0	5.6	6	1	1	7	7	6	0	Domain	of	unknown	function	(DUF1510)
Strep_SA_rep	PF06696.11	gi|298675989|ref|YP_003727739.1|	-	0.18	11.8	26.6	3.2	7.8	0.1	6.8	7	0	0	7	7	7	0	Streptococcal	surface	antigen	repeat
UPF0122	PF04297.14	gi|298675989|ref|YP_003727739.1|	-	1	9.6	12.9	7.5	6.9	0.0	4.9	3	2	4	7	7	4	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
NOP5NT	PF08156.13	gi|298675989|ref|YP_003727739.1|	-	4.3	7.8	7.1	10	6.6	0.1	4.7	5	1	0	5	5	3	0	NOP5NT	(NUC127)	domain
Sda	PF08970.10	gi|298675989|ref|YP_003727739.1|	-	6.7	6.5	18.8	0.95	9.3	0.1	6.5	8	0	0	8	8	7	0	Sporulation	inhibitor	A
Radical_SAM	PF04055.21	gi|298675990|ref|YP_003727740.1|	-	2.1e-17	64.0	0.2	5.2e-17	62.7	0.1	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
DUF3463	PF11946.8	gi|298675990|ref|YP_003727740.1|	-	9.4e-07	28.7	0.3	1.8e-06	27.8	0.3	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3463)
Fer4_12	PF13353.6	gi|298675990|ref|YP_003727740.1|	-	0.0025	18.1	0.0	0.0075	16.5	0.0	1.8	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SAM_adeno_trans	PF01887.16	gi|298675991|ref|YP_003727741.1|	-	3.7e-82	275.3	0.3	4.2e-82	275.1	0.3	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
ThiC_Rad_SAM	PF01964.18	gi|298675992|ref|YP_003727742.1|	-	7.4e-174	578.4	0.5	8.4e-174	578.2	0.5	1.0	1	0	0	1	1	1	1	Radical	SAM	ThiC	family
EAP30	PF04157.16	gi|298675992|ref|YP_003727742.1|	-	0.031	13.6	0.1	0.044	13.1	0.1	1.3	1	0	0	1	1	1	0	EAP30/Vps36	family
Pyr_excise	PF03013.14	gi|298675993|ref|YP_003727743.1|	-	1.4e-14	54.2	0.8	2e-14	53.7	0.8	1.3	1	1	0	1	1	1	1	Pyrimidine	dimer	DNA	glycosylase
MukF_C	PF17193.4	gi|298675993|ref|YP_003727743.1|	-	0.079	13.1	0.0	0.1	12.7	0.0	1.1	1	0	0	1	1	1	0	MukF	C-terminal	domain
Glycos_transf_2	PF00535.26	gi|298675994|ref|YP_003727744.1|	-	3.4e-17	62.8	0.0	5e-17	62.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|298675994|ref|YP_003727744.1|	-	8.4e-10	38.9	0.0	1.2e-09	38.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|298675994|ref|YP_003727744.1|	-	0.011	16.3	0.0	0.021	15.3	0.0	1.5	1	1	0	1	1	1	0	Glycosyl	transferase	family	2
DUF5420	PF17457.2	gi|298675994|ref|YP_003727744.1|	-	0.078	12.9	0.0	0.2	11.5	0.0	1.6	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5420)
CBS	PF00571.28	gi|298675994|ref|YP_003727744.1|	-	0.089	13.3	0.0	0.82	10.2	0.0	2.5	2	0	0	2	2	2	0	CBS	domain
TBP	PF00352.21	gi|298675995|ref|YP_003727745.1|	-	2.9e-55	184.2	0.1	2.7e-26	91.4	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.8	gi|298675995|ref|YP_003727745.1|	-	3.1e-08	33.6	0.0	0.0067	16.5	0.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
NdhS	PF11623.8	gi|298675995|ref|YP_003727745.1|	-	0.005	16.5	0.0	4.4	7.1	0.0	2.5	2	0	0	2	2	2	2	NAD(P)H	dehydrogenase	subunit	S
MTH865	PF07747.11	gi|298675996|ref|YP_003727746.1|	-	1.3e-30	105.0	0.1	1.4e-30	104.8	0.1	1.0	1	0	0	1	1	1	1	MTH865-like	family
HTH_5	PF01022.20	gi|298675997|ref|YP_003727747.1|	-	7.1e-07	29.0	0.0	1.5e-06	28.0	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.6	gi|298675997|ref|YP_003727747.1|	-	3.7e-05	23.6	0.6	0.00012	22.0	0.6	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_20	PF12840.7	gi|298675997|ref|YP_003727747.1|	-	0.0019	18.2	0.0	0.0035	17.4	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.6	gi|298675997|ref|YP_003727747.1|	-	0.0091	16.2	0.0	0.027	14.6	0.0	1.9	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PI3K_P85_iSH2	PF16454.5	gi|298675997|ref|YP_003727747.1|	-	0.013	15.1	5.8	0.013	15.1	5.8	2.5	1	1	0	2	2	2	0	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
HTH_24	PF13412.6	gi|298675997|ref|YP_003727747.1|	-	0.018	14.6	0.0	0.034	13.7	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
GlutR_dimer	PF00745.20	gi|298675997|ref|YP_003727747.1|	-	0.045	14.2	0.1	0.28	11.6	0.0	2.3	1	1	2	3	3	3	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
KaiA	PF07688.12	gi|298675997|ref|YP_003727747.1|	-	0.073	13.2	4.2	0.35	11.0	2.5	2.2	2	0	0	2	2	2	0	KaiA	C-terminal	domain
Peptidase_C50	PF03568.17	gi|298675997|ref|YP_003727747.1|	-	0.38	9.8	4.7	0.47	9.5	4.7	1.1	1	0	0	1	1	1	0	Peptidase	family	C50
OSCP	PF00213.18	gi|298675997|ref|YP_003727747.1|	-	0.9	9.6	4.7	0.6	10.2	0.5	2.3	1	1	1	2	2	2	0	ATP	synthase	delta	(OSCP)	subunit
DUF1043	PF06295.12	gi|298675997|ref|YP_003727747.1|	-	1.2	9.1	5.4	6.7	6.7	5.4	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1043)
GED	PF02212.18	gi|298675997|ref|YP_003727747.1|	-	5.1	7.3	9.1	0.6	10.3	2.4	2.5	2	1	0	2	2	2	0	Dynamin	GTPase	effector	domain
SMC_ScpB	PF04079.16	gi|298675998|ref|YP_003727748.1|	-	6.7e-39	133.1	0.3	8.2e-38	129.5	0.0	2.2	2	0	0	2	2	2	1	Segregation	and	condensation	complex	subunit	ScpB
HTH_20	PF12840.7	gi|298675998|ref|YP_003727748.1|	-	0.16	12.1	0.0	0.28	11.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
SMC_ScpA	PF02616.14	gi|298675999|ref|YP_003727749.1|	-	1.2e-22	81.0	5.1	4.5e-21	75.9	5.1	2.1	1	1	0	1	1	1	1	Segregation	and	condensation	protein	ScpA
Rad21_Rec8	PF04824.16	gi|298675999|ref|YP_003727749.1|	-	0.03	13.6	0.0	0.059	12.7	0.0	1.6	1	0	0	1	1	1	0	Conserved	region	of	Rad21	/	Rec8	like	protein
Questin_oxidase	PF14027.6	gi|298675999|ref|YP_003727749.1|	-	0.16	11.5	0.5	0.22	11.1	0.5	1.2	1	0	0	1	1	1	0	Questin	oxidase-like
SMC_N	PF02463.19	gi|298676000|ref|YP_003727750.1|	-	8.3e-44	149.6	106.6	2.9e-41	141.3	106.6	3.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SMC_hinge	PF06470.13	gi|298676000|ref|YP_003727750.1|	-	1.9e-33	115.2	0.0	1e-32	112.9	0.0	2.4	1	0	0	1	1	1	1	SMC	proteins	Flexible	Hinge	Domain
AAA_23	PF13476.6	gi|298676000|ref|YP_003727750.1|	-	5e-18	66.3	8.4	5e-18	66.3	8.4	8.6	1	1	4	6	6	3	1	AAA	domain
Spc7	PF08317.11	gi|298676000|ref|YP_003727750.1|	-	4.6e-09	35.6	158.8	0.0015	17.5	23.5	8.1	2	2	6	8	8	8	5	Spc7	kinetochore	protein
AAA_15	PF13175.6	gi|298676000|ref|YP_003727750.1|	-	9.6e-09	35.4	32.5	9.6e-09	35.4	32.5	4.4	2	2	2	4	4	2	1	AAA	ATPase	domain
APG6_N	PF17675.1	gi|298676000|ref|YP_003727750.1|	-	3.2e-08	34.2	170.8	0.011	16.2	15.7	9.8	2	2	5	8	8	8	4	Apg6	coiled-coil	region
MscS_porin	PF12795.7	gi|298676000|ref|YP_003727750.1|	-	2.2e-06	27.4	115.1	0.0017	17.9	19.4	6.1	2	2	4	6	6	6	3	Mechanosensitive	ion	channel	porin	domain
AAA_29	PF13555.6	gi|298676000|ref|YP_003727750.1|	-	2.9e-06	26.9	0.0	6.5e-06	25.8	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
CENP-F_leu_zip	PF10473.9	gi|298676000|ref|YP_003727750.1|	-	5.3e-06	26.5	168.0	0.046	13.7	27.3	8.3	3	2	4	8	8	7	6	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TolA_bind_tri	PF16331.5	gi|298676000|ref|YP_003727750.1|	-	5.1e-05	23.3	2.2	5.1e-05	23.3	2.2	10.5	8	4	1	9	9	8	3	TolA	binding	protein	trimerisation
DUF3584	PF12128.8	gi|298676000|ref|YP_003727750.1|	-	0.00013	19.7	128.6	0.0016	16.1	57.8	3.0	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF3584)
AAA_21	PF13304.6	gi|298676000|ref|YP_003727750.1|	-	0.00017	21.5	0.1	0.00017	21.5	0.1	5.1	3	2	0	3	3	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
EzrA	PF06160.12	gi|298676000|ref|YP_003727750.1|	-	0.00037	18.8	26.1	0.00037	18.8	26.1	7.0	2	2	3	5	5	5	4	Septation	ring	formation	regulator,	EzrA
FliJ	PF02050.16	gi|298676000|ref|YP_003727750.1|	-	0.00043	20.5	105.7	0.059	13.6	6.5	9.6	3	2	6	10	10	10	4	Flagellar	FliJ	protein
Snapin_Pallidin	PF14712.6	gi|298676000|ref|YP_003727750.1|	-	0.00073	19.9	1.6	0.00073	19.9	1.6	10.3	3	3	4	9	9	9	1	Snapin/Pallidin
IFT57	PF10498.9	gi|298676000|ref|YP_003727750.1|	-	0.00093	18.3	20.7	0.00093	18.3	20.7	6.9	2	2	5	7	7	7	3	Intra-flagellar	transport	protein	57
ATG16	PF08614.11	gi|298676000|ref|YP_003727750.1|	-	0.0015	18.8	21.5	0.0015	18.8	21.5	8.1	2	2	4	6	6	4	3	Autophagy	protein	16	(ATG16)
Filament	PF00038.21	gi|298676000|ref|YP_003727750.1|	-	0.0018	17.9	140.2	0.084	12.4	9.7	8.1	2	2	6	8	8	8	4	Intermediate	filament	protein
WEMBL	PF05701.11	gi|298676000|ref|YP_003727750.1|	-	0.0027	16.5	31.6	0.0027	16.5	31.6	4.4	2	1	2	4	4	3	1	Weak	chloroplast	movement	under	blue	light
Golgin_A5	PF09787.9	gi|298676000|ref|YP_003727750.1|	-	0.0044	16.5	34.7	0.0044	16.5	34.7	6.3	2	2	4	6	6	6	2	Golgin	subfamily	A	member	5
AAA_13	PF13166.6	gi|298676000|ref|YP_003727750.1|	-	0.0055	15.4	139.9	0.01	14.5	19.8	5.9	3	2	2	6	6	6	4	AAA	domain
Laminin_II	PF06009.12	gi|298676000|ref|YP_003727750.1|	-	0.011	15.8	10.5	0.011	15.8	10.5	8.8	3	2	5	9	9	9	0	Laminin	Domain	II
Fez1	PF06818.15	gi|298676000|ref|YP_003727750.1|	-	0.053	14.0	137.4	0.41	11.1	15.6	7.4	2	2	5	7	7	7	0	Fez1
Fib_alpha	PF08702.10	gi|298676000|ref|YP_003727750.1|	-	0.057	13.6	121.9	0.27	11.4	10.6	8.6	4	2	4	8	8	8	0	Fibrinogen	alpha/beta	chain	family
DUF3450	PF11932.8	gi|298676000|ref|YP_003727750.1|	-	0.5	9.6	121.4	0.075	12.3	16.3	9.0	3	2	6	9	9	9	0	Protein	of	unknown	function	(DUF3450)
DUF1664	PF07889.12	gi|298676000|ref|YP_003727750.1|	-	0.5	10.4	103.5	0.04	14.0	8.0	10.5	2	2	8	10	10	10	0	Protein	of	unknown	function	(DUF1664)
NPV_P10	PF05531.12	gi|298676000|ref|YP_003727750.1|	-	0.7	10.4	73.4	0.14	12.7	3.8	10.3	4	2	5	9	9	9	0	Nucleopolyhedrovirus	P10	protein
Lebercilin	PF15619.6	gi|298676000|ref|YP_003727750.1|	-	3.8	7.1	145.5	0.012	15.2	16.2	7.1	2	2	3	5	5	5	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
TACC_C	PF05010.14	gi|298676000|ref|YP_003727750.1|	-	7.9	6.2	130.8	0.028	14.2	16.8	7.3	3	2	4	7	7	7	0	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
ApoC-I	PF04691.12	gi|298676001|ref|YP_003727751.1|	-	0.077	12.9	0.4	0.077	12.9	0.4	2.2	2	0	0	2	2	2	0	Apolipoprotein	C-I	(ApoC-1)
SlyX	PF04102.12	gi|298676001|ref|YP_003727751.1|	-	0.16	12.6	8.4	0.72	10.5	0.1	3.1	3	0	0	3	3	3	0	SlyX
UPF0113_N	PF17833.1	gi|298676001|ref|YP_003727751.1|	-	0.16	12.5	1.8	0.43	11.2	1.8	1.7	1	0	0	1	1	1	0	UPF0113	Pre-PUA	domain
DUF745	PF05335.13	gi|298676001|ref|YP_003727751.1|	-	0.26	11.0	4.4	0.46	10.2	4.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF745)
Tnp_22_trimer	PF17489.2	gi|298676001|ref|YP_003727751.1|	-	0.29	11.1	0.1	0.29	11.1	0.1	3.9	4	0	0	4	4	4	0	L1	transposable	element	trimerization	domain
Prominin	PF05478.11	gi|298676001|ref|YP_003727751.1|	-	0.34	8.8	3.9	0.37	8.7	3.9	1.2	1	0	0	1	1	1	0	Prominin
PIN_8	PF18476.1	gi|298676001|ref|YP_003727751.1|	-	0.46	10.3	13.8	0.026	14.4	7.4	1.9	2	0	0	2	2	2	0	PIN	like	domain
Spc7	PF08317.11	gi|298676001|ref|YP_003727751.1|	-	0.6	8.9	15.5	0.063	12.1	11.1	1.5	2	0	0	2	2	2	0	Spc7	kinetochore	protein
Spectrin	PF00435.21	gi|298676001|ref|YP_003727751.1|	-	0.64	10.5	8.1	0.84	10.2	6.5	2.0	1	1	1	2	2	2	0	Spectrin	repeat
DUF1664	PF07889.12	gi|298676001|ref|YP_003727751.1|	-	0.72	9.9	10.2	0.14	12.2	6.6	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1664)
HHH_8	PF14716.6	gi|298676001|ref|YP_003727751.1|	-	0.85	10.0	3.8	8.7	6.8	0.8	2.4	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
Prefoldin_2	PF01920.20	gi|298676001|ref|YP_003727751.1|	-	1.3	9.0	18.6	0.68	9.9	3.9	2.8	3	0	0	3	3	3	0	Prefoldin	subunit
Laminin_II	PF06009.12	gi|298676001|ref|YP_003727751.1|	-	2	8.4	10.3	9.3	6.3	10.3	2.1	1	1	0	1	1	1	0	Laminin	Domain	II
APG6_N	PF17675.1	gi|298676001|ref|YP_003727751.1|	-	3.5	8.2	14.7	0.29	11.7	9.4	1.9	2	0	0	2	2	2	0	Apg6	coiled-coil	region
COG2	PF06148.11	gi|298676001|ref|YP_003727751.1|	-	3.6	7.7	8.1	9.4	6.3	8.1	1.7	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Fib_alpha	PF08702.10	gi|298676001|ref|YP_003727751.1|	-	3.9	7.7	16.8	0.35	11.1	9.1	2.2	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
DUF2203	PF09969.9	gi|298676001|ref|YP_003727751.1|	-	4.5	8.0	8.3	0.74	10.5	3.7	2.0	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
NPV_P10	PF05531.12	gi|298676001|ref|YP_003727751.1|	-	5.5	7.5	10.5	0.68	10.4	0.5	2.6	2	1	1	3	3	2	0	Nucleopolyhedrovirus	P10	protein
ABC_tran_CTD	PF16326.5	gi|298676001|ref|YP_003727751.1|	-	5.6	7.3	11.0	69	3.8	3.1	3.0	1	1	1	2	2	2	0	ABC	transporter	C-terminal	domain
DUF4635	PF15466.6	gi|298676001|ref|YP_003727751.1|	-	6.8	6.2	8.8	14	5.2	1.2	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4635)
DUF2802	PF10975.8	gi|298676001|ref|YP_003727751.1|	-	9.3	6.5	7.7	1.6	8.9	0.1	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2802)
DUF4407	PF14362.6	gi|298676001|ref|YP_003727751.1|	-	9.6	5.5	10.0	6.9	5.9	7.8	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
AAA_23	PF13476.6	gi|298676002|ref|YP_003727752.1|	-	2.2e-21	77.3	12.9	2.2e-21	77.3	12.9	6.4	1	1	4	5	5	2	1	AAA	domain
SMC_N	PF02463.19	gi|298676002|ref|YP_003727752.1|	-	8.1e-10	38.5	0.6	8.1e-10	38.5	0.6	3.4	2	1	0	2	2	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|298676002|ref|YP_003727752.1|	-	4.6e-07	29.9	43.1	4.6e-07	29.9	43.1	4.5	1	1	4	5	5	1	1	AAA	ATPase	domain
MscS_porin	PF12795.7	gi|298676002|ref|YP_003727752.1|	-	1.6e-05	24.6	21.8	1.6e-05	24.6	21.8	5.4	1	1	3	5	5	5	2	Mechanosensitive	ion	channel	porin	domain
AAA_29	PF13555.6	gi|298676002|ref|YP_003727752.1|	-	0.00013	21.6	0.0	0.00026	20.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
TPR_MLP1_2	PF07926.12	gi|298676002|ref|YP_003727752.1|	-	0.00062	19.8	13.0	0.00062	19.8	13.0	8.1	3	2	6	9	9	9	2	TPR/MLP1/MLP2-like	protein
Spc7	PF08317.11	gi|298676002|ref|YP_003727752.1|	-	0.00085	18.3	118.5	0.087	11.7	17.0	6.3	1	1	5	6	6	6	4	Spc7	kinetochore	protein
AAA_13	PF13166.6	gi|298676002|ref|YP_003727752.1|	-	0.00089	18.0	116.1	0.0079	14.9	34.2	5.9	2	1	4	6	6	6	3	AAA	domain
AAA_27	PF13514.6	gi|298676002|ref|YP_003727752.1|	-	0.0021	17.7	0.1	0.0021	17.7	0.1	6.0	6	2	1	7	7	7	1	AAA	domain
SbcCD_C	PF13558.6	gi|298676002|ref|YP_003727752.1|	-	0.016	15.4	0.0	0.043	14.0	0.0	1.7	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_16	PF13191.6	gi|298676002|ref|YP_003727752.1|	-	0.018	15.4	0.0	0.12	12.8	0.0	2.4	1	0	0	1	1	1	0	AAA	ATPase	domain
DUF1664	PF07889.12	gi|298676002|ref|YP_003727752.1|	-	0.083	12.9	81.7	0.37	10.8	6.3	7.8	2	2	7	10	10	10	0	Protein	of	unknown	function	(DUF1664)
Filament	PF00038.21	gi|298676002|ref|YP_003727752.1|	-	0.15	11.6	98.6	0.18	11.4	8.4	6.6	2	2	4	6	6	6	0	Intermediate	filament	protein
MukB	PF04310.12	gi|298676002|ref|YP_003727752.1|	-	0.18	11.6	0.0	0.18	11.6	0.0	5.2	3	2	1	5	5	5	0	MukB	N-terminal
FtsK_SpoIIIE	PF01580.18	gi|298676002|ref|YP_003727752.1|	-	0.48	9.7	0.0	0.48	9.7	0.0	3.1	4	0	0	4	4	4	0	FtsK/SpoIIIE	family
Fez1	PF06818.15	gi|298676002|ref|YP_003727752.1|	-	0.94	9.9	98.8	0.14	12.6	21.8	5.5	1	1	4	5	5	4	0	Fez1
WXG100	PF06013.12	gi|298676002|ref|YP_003727752.1|	-	6.2	7.1	30.1	4.7	7.5	0.1	7.6	6	3	2	8	8	8	0	Proteins	of	100	residues	with	WXG
ATG16	PF08614.11	gi|298676002|ref|YP_003727752.1|	-	8.4	6.6	94.3	4.3	7.5	29.2	5.6	1	1	5	6	6	6	0	Autophagy	protein	16	(ATG16)
Metallophos	PF00149.28	gi|298676003|ref|YP_003727753.1|	-	1.7e-12	48.2	0.3	1.7e-12	48.2	0.3	2.5	3	0	0	3	3	3	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|298676003|ref|YP_003727753.1|	-	2.4e-10	40.9	0.0	8.4e-10	39.1	0.0	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Grg1	PF11034.8	gi|298676003|ref|YP_003727753.1|	-	1.8	8.9	9.4	4.7	7.5	9.4	1.8	1	0	0	1	1	1	0	Glucose-repressible	protein	Grg1
DUF919	PF06034.11	gi|298676004|ref|YP_003727754.1|	-	0.0014	18.5	0.5	0.0027	17.5	0.5	1.5	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
PAF-AH_p_II	PF03403.13	gi|298676005|ref|YP_003727755.1|	-	0.0037	15.9	0.0	0.0047	15.5	0.0	1.0	1	0	0	1	1	1	1	Platelet-activating	factor	acetylhydrolase,	isoform	II
zf-C3HC4_3	PF13920.6	gi|298676005|ref|YP_003727755.1|	-	0.027	14.3	0.6	0.06	13.2	0.6	1.6	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
A2L_zn_ribbon	PF08792.10	gi|298676005|ref|YP_003727755.1|	-	0.77	9.6	5.5	19	5.1	5.5	2.6	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
PolC_DP2	PF03833.13	gi|298676006|ref|YP_003727756.1|	-	0.13	10.1	1.2	0.13	10.1	1.2	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
zn-ribbon_14	PF16503.5	gi|298676006|ref|YP_003727756.1|	-	0.33	10.5	5.5	0.6	9.7	5.5	1.4	1	0	0	1	1	1	0	Zinc-ribbon
FMN_red	PF03358.15	gi|298676007|ref|YP_003727757.1|	-	4.8e-24	84.9	0.0	6.2e-24	84.5	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|298676007|ref|YP_003727757.1|	-	3.1e-10	40.1	0.0	4.2e-10	39.7	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
HEM4	PF02602.15	gi|298676008|ref|YP_003727758.1|	-	1.2e-34	119.7	0.0	1.6e-31	109.5	0.0	1.8	1	1	1	2	2	2	2	Uroporphyrinogen-III	synthase	HemD
IMS_HHH	PF11798.8	gi|298676008|ref|YP_003727758.1|	-	0.0084	16.4	0.0	1.1	9.7	0.0	2.9	2	0	0	2	2	2	1	IMS	family	HHH	motif
Nitro_FeMo-Co	PF02579.17	gi|298676008|ref|YP_003727758.1|	-	0.052	13.9	0.0	0.19	12.1	0.0	2.0	2	1	0	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
HHH	PF00633.23	gi|298676008|ref|YP_003727758.1|	-	0.064	13.2	0.1	5.9	7.0	0.0	2.6	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
CTP_transf_like	PF01467.26	gi|298676010|ref|YP_003727760.1|	-	2.4e-16	60.2	0.0	1.5e-15	57.7	0.0	1.9	1	1	0	1	1	1	1	Cytidylyltransferase-like
SAM_4	PF18017.1	gi|298676010|ref|YP_003727760.1|	-	0.013	15.4	0.0	0.021	14.8	0.0	1.4	1	0	0	1	1	1	0	SAM	domain	(Sterile	alpha	motif)
FAD_syn	PF06574.12	gi|298676010|ref|YP_003727760.1|	-	0.061	13.2	0.0	0.084	12.8	0.0	1.3	1	0	0	1	1	1	0	FAD	synthetase
Citrate_ly_lig	PF08218.11	gi|298676010|ref|YP_003727760.1|	-	0.068	12.8	0.0	1.8	8.2	0.0	2.2	2	1	0	2	2	2	0	Citrate	lyase	ligase	C-terminal	domain
HIGH_NTase1	PF05636.11	gi|298676010|ref|YP_003727760.1|	-	0.19	10.9	0.0	7	5.7	0.0	2.1	2	0	0	2	2	2	0	HIGH	Nucleotidyl	Transferase
FrhB_FdhB_C	PF04432.13	gi|298676011|ref|YP_003727761.1|	-	2.3e-35	121.7	1.1	2.5e-35	121.6	0.0	1.6	2	0	0	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|298676011|ref|YP_003727761.1|	-	7.7e-16	58.0	0.0	1.3e-15	57.2	0.0	1.3	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_7	PF12838.7	gi|298676011|ref|YP_003727761.1|	-	2.7e-08	34.3	10.3	2.7e-08	34.3	10.3	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298676011|ref|YP_003727761.1|	-	1.5e-07	30.9	21.4	7.4e-07	28.7	7.0	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|298676011|ref|YP_003727761.1|	-	4.8e-06	26.6	8.9	4.8e-06	26.6	8.9	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298676011|ref|YP_003727761.1|	-	1e-05	25.6	13.0	1e-05	25.6	13.0	2.5	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298676011|ref|YP_003727761.1|	-	0.00013	22.4	7.2	0.16	12.6	2.5	2.7	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_8	PF13183.6	gi|298676011|ref|YP_003727761.1|	-	0.00014	22.2	9.3	0.00058	20.2	9.4	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298676011|ref|YP_003727761.1|	-	0.00031	21.2	6.4	0.00031	21.2	6.4	1.9	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298676011|ref|YP_003727761.1|	-	0.00034	21.5	16.9	0.0019	19.1	13.2	3.0	2	1	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|298676011|ref|YP_003727761.1|	-	0.0015	18.5	6.1	0.0015	18.5	6.1	3.2	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|298676011|ref|YP_003727761.1|	-	0.0028	17.6	17.7	0.004	17.2	4.4	2.8	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|298676011|ref|YP_003727761.1|	-	0.018	15.8	2.6	0.14	12.9	0.4	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.7	gi|298676011|ref|YP_003727761.1|	-	0.034	14.7	3.7	0.034	14.7	3.7	3.0	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298676011|ref|YP_003727761.1|	-	0.059	13.5	23.4	0.084	13.0	16.8	3.1	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|298676011|ref|YP_003727761.1|	-	0.066	14.1	4.5	0.97	10.3	0.4	2.6	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
SHOCT	PF09851.9	gi|298676011|ref|YP_003727761.1|	-	0.59	10.0	1.6	0.72	9.7	0.2	1.9	2	0	0	2	2	2	0	Short	C-terminal	domain
Bac_luciferase	PF00296.20	gi|298676012|ref|YP_003727762.1|	-	1.2e-66	225.3	0.0	1.4e-66	225.1	0.0	1.0	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
PHP	PF02811.19	gi|298676012|ref|YP_003727762.1|	-	0.044	14.1	0.0	0.056	13.7	0.0	1.4	1	1	0	1	1	1	0	PHP	domain
Desulfoferrod_N	PF06397.12	gi|298676014|ref|YP_003727764.1|	-	4.3e-14	51.8	10.8	4.6e-14	51.8	10.8	1.0	1	0	0	1	1	1	1	Desulfoferrodoxin,	N-terminal	domain
zf-UDP	PF14569.6	gi|298676014|ref|YP_003727764.1|	-	0.012	15.8	1.7	0.013	15.6	1.7	1.1	1	0	0	1	1	1	0	Zinc-binding	RING-finger
DUF3449	PF11931.8	gi|298676014|ref|YP_003727764.1|	-	0.094	12.5	0.1	0.097	12.5	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3449)
zf_UBZ	PF18439.1	gi|298676014|ref|YP_003727764.1|	-	0.2	11.3	1.6	0.22	11.2	0.1	1.7	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
DUF2180	PF09947.9	gi|298676015|ref|YP_003727765.1|	-	2.5e-25	88.2	11.1	3e-25	88.0	11.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2180)
zf-AN1	PF01428.16	gi|298676015|ref|YP_003727765.1|	-	0.0022	18.1	5.9	0.13	12.4	0.3	2.4	2	1	0	2	2	2	2	AN1-like	Zinc	finger
Tnp_zf-ribbon_2	PF13842.6	gi|298676015|ref|YP_003727765.1|	-	0.023	15.5	1.3	0.023	15.5	1.3	2.2	2	1	0	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
zf-C3HC4_3	PF13920.6	gi|298676015|ref|YP_003727765.1|	-	0.26	11.2	9.8	1.2	9.1	2.2	2.3	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
FYVE	PF01363.21	gi|298676015|ref|YP_003727765.1|	-	0.28	11.3	6.6	0.7	10.1	6.6	1.7	1	1	0	1	1	1	0	FYVE	zinc	finger
DZR	PF12773.7	gi|298676015|ref|YP_003727765.1|	-	4.2	7.5	9.7	1.2e+02	2.8	9.7	2.2	1	1	0	1	1	1	0	Double	zinc	ribbon
PhnA_Zn_Ribbon	PF08274.12	gi|298676015|ref|YP_003727765.1|	-	6.5	6.8	10.5	6	6.9	2.5	3.2	3	1	0	3	3	3	0	PhnA	Zinc-Ribbon
zf-AD	PF07776.15	gi|298676015|ref|YP_003727765.1|	-	7.6	6.8	10.8	1.6	9.0	5.9	2.2	1	1	0	2	2	2	0	Zinc-finger	associated	domain	(zf-AD)
DUF2180	PF09947.9	gi|298676016|ref|YP_003727766.1|	-	1.5e-21	76.1	2.5	1.7e-21	76.0	2.5	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2180)
Tnp_zf-ribbon_2	PF13842.6	gi|298676016|ref|YP_003727766.1|	-	7.1e-05	23.5	5.2	0.0027	18.5	2.7	2.1	2	0	0	2	2	2	2	DDE_Tnp_1-like	zinc-ribbon
FYVE	PF01363.21	gi|298676016|ref|YP_003727766.1|	-	0.03	14.5	3.5	0.1	12.8	3.5	1.9	1	1	0	1	1	1	0	FYVE	zinc	finger
zf-AN1	PF01428.16	gi|298676016|ref|YP_003727766.1|	-	0.2	11.9	9.1	0.76	10.0	5.3	2.5	2	1	1	3	3	3	0	AN1-like	Zinc	finger
C5HCH	PF17982.1	gi|298676016|ref|YP_003727766.1|	-	0.29	11.3	4.5	0.13	12.4	1.2	1.9	2	0	0	2	2	2	0	NSD	Cys-His	rich	domain
CMD	PF02627.20	gi|298676017|ref|YP_003727767.1|	-	4.2e-14	52.4	0.1	5.6e-14	52.0	0.1	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
Cytochrome_C554	PF13435.6	gi|298676018|ref|YP_003727768.1|	-	7.6e-12	46.0	11.5	4.2e-10	40.4	3.1	2.6	2	0	0	2	2	2	2	Cytochrome	c554	and	c-prime
Cytochrome_C7	PF14522.6	gi|298676018|ref|YP_003727768.1|	-	2.4e-06	27.4	14.7	0.0032	17.5	5.1	2.8	1	1	1	2	2	2	2	Cytochrome	c7	and	related	cytochrome	c
Paired_CXXCH_1	PF09699.10	gi|298676018|ref|YP_003727768.1|	-	0.00057	19.6	10.2	0.37	10.6	1.3	4.7	4	1	0	4	4	4	2	Doubled	CXXCH	motif	(Paired_CXXCH_1)
Cytochrom_c3_2	PF14537.6	gi|298676018|ref|YP_003727768.1|	-	0.035	14.6	17.6	2.4	8.7	2.9	3.5	2	2	0	3	3	3	0	Cytochrome	c3
Cytochrom_NNT	PF03264.14	gi|298676018|ref|YP_003727768.1|	-	0.16	11.6	15.8	0.13	11.9	1.5	3.3	2	1	1	3	3	3	0	NapC/NirT	cytochrome	c	family,	N-terminal	region
Cytochrom_C552	PF02335.15	gi|298676018|ref|YP_003727768.1|	-	0.28	10.1	7.7	0.42	9.5	0.1	2.6	2	1	0	2	2	2	0	Cytochrome	c552
C1_1	PF00130.22	gi|298676018|ref|YP_003727768.1|	-	0.35	10.8	9.9	6.4	6.7	0.1	3.5	3	1	0	3	3	3	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
FeoB_associated	PF12669.7	gi|298676018|ref|YP_003727768.1|	-	3	8.3	6.1	26	5.3	0.4	3.8	4	0	0	4	4	4	0	FeoB-associated	Cys-rich	membrane	protein
Cytochrom_CIII	PF02085.16	gi|298676018|ref|YP_003727768.1|	-	3.9	7.9	16.5	47	4.4	6.0	3.0	1	1	1	2	2	2	0	Class	III	cytochrome	C	family
Cytochrome_CBB3	PF13442.6	gi|298676018|ref|YP_003727768.1|	-	6.3	7.2	20.4	17	5.9	0.2	5.1	1	1	4	5	5	5	0	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
FMN_red	PF03358.15	gi|298676019|ref|YP_003727769.1|	-	6.1e-32	110.5	0.0	7.7e-32	110.2	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|298676019|ref|YP_003727769.1|	-	7.7e-05	22.5	0.0	0.00012	21.9	0.0	1.4	1	1	0	1	1	1	1	Flavodoxin-like	fold
Ycf54	PF10674.9	gi|298676019|ref|YP_003727769.1|	-	0.14	12.4	0.1	0.43	10.9	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2488)
NAD_binding_1	PF00175.21	gi|298676020|ref|YP_003727770.1|	-	2e-18	67.1	0.0	2.7e-18	66.6	0.0	1.2	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
FAD_binding_6	PF00970.24	gi|298676020|ref|YP_003727770.1|	-	1.2e-14	54.4	0.0	1.9e-14	53.8	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
NAD_binding_6	PF08030.12	gi|298676020|ref|YP_003727770.1|	-	2.6e-07	30.9	0.9	2e-06	28.0	0.1	2.1	1	1	1	2	2	2	1	Ferric	reductase	NAD	binding	domain
FAD_binding_8	PF08022.12	gi|298676020|ref|YP_003727770.1|	-	8.6e-07	29.0	0.1	3.2e-06	27.2	0.1	1.9	1	1	0	1	1	1	1	FAD-binding	domain
Rubrerythrin	PF02915.17	gi|298676021|ref|YP_003727771.1|	-	7.4e-35	120.3	3.8	9.5e-35	120.0	3.8	1.1	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.24	gi|298676021|ref|YP_003727771.1|	-	7.7e-11	42.1	0.7	1e-10	41.7	0.7	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
HypA	PF01155.19	gi|298676021|ref|YP_003727771.1|	-	0.0048	16.9	0.1	0.0089	16.0	0.1	1.4	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-like	PF04071.12	gi|298676021|ref|YP_003727771.1|	-	0.0071	16.2	0.1	0.017	15.0	0.1	1.6	1	0	0	1	1	1	1	Cysteine-rich	small	domain
Zn-ribbon_8	PF09723.10	gi|298676021|ref|YP_003727771.1|	-	0.015	15.4	1.4	0.031	14.4	1.4	1.5	1	0	0	1	1	1	0	Zinc	ribbon	domain
DUF4125	PF13526.6	gi|298676021|ref|YP_003727771.1|	-	0.017	14.8	0.1	0.11	12.0	0.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4125)
DUF4379	PF14311.6	gi|298676021|ref|YP_003727771.1|	-	0.026	14.9	0.2	0.052	13.9	0.2	1.6	1	0	0	1	1	1	0	Probable	Zinc-ribbon	domain
RNHCP	PF12647.7	gi|298676021|ref|YP_003727771.1|	-	0.03	14.3	0.3	0.078	13.0	0.4	1.7	1	1	0	1	1	1	0	RNHCP	domain
COQ7	PF03232.13	gi|298676021|ref|YP_003727771.1|	-	0.038	13.8	0.4	1.8	8.3	0.2	2.1	1	1	1	2	2	2	0	Ubiquinone	biosynthesis	protein	COQ7
TFIIS_C	PF01096.18	gi|298676021|ref|YP_003727771.1|	-	0.057	13.3	1.0	10	6.1	0.1	2.5	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
MCM_OB	PF17207.3	gi|298676021|ref|YP_003727771.1|	-	0.08	12.8	0.2	0.12	12.2	0.2	1.2	1	0	0	1	1	1	0	MCM	OB	domain
DUF892	PF05974.12	gi|298676021|ref|YP_003727771.1|	-	0.094	12.7	1.7	0.65	10.0	0.5	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF892)
RecR	PF02132.15	gi|298676021|ref|YP_003727771.1|	-	0.11	12.1	0.4	0.24	11.0	0.4	1.5	1	0	0	1	1	1	0	RecR	protein
zinc_ribbon_10	PF10058.9	gi|298676021|ref|YP_003727771.1|	-	0.19	11.5	0.3	0.19	11.5	0.3	2.5	4	0	0	4	4	3	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zinc_ribbon_2	PF13240.6	gi|298676021|ref|YP_003727771.1|	-	0.35	10.6	2.2	0.8	9.5	2.2	1.7	1	0	0	1	1	1	0	zinc-ribbon	domain
DUF2387	PF09526.10	gi|298676021|ref|YP_003727771.1|	-	0.63	10.2	4.3	4	7.6	0.2	2.6	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Rubredoxin_2	PF18073.1	gi|298676021|ref|YP_003727771.1|	-	1	9.1	3.6	1.3	8.8	0.1	2.1	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
HalOD2	PF18547.1	gi|298676021|ref|YP_003727771.1|	-	3.5	7.6	5.8	1.2	9.1	0.5	2.5	2	1	1	3	3	3	0	Halobacterial	output	domain	2
Flavoprotein	PF02441.19	gi|298676022|ref|YP_003727772.1|	-	1.7e-19	70.1	0.0	3.9e-19	69.0	0.0	1.5	2	0	0	2	2	2	1	Flavoprotein
DUF429	PF04250.13	gi|298676023|ref|YP_003727773.1|	-	0.00044	20.1	0.0	0.0021	17.9	0.0	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
Baculo_LEF-10	PF07206.11	gi|298676023|ref|YP_003727773.1|	-	0.14	12.4	0.6	0.28	11.4	0.6	1.4	1	0	0	1	1	1	0	Baculovirus	late	expression	factor	10	(LEF-10)
Inos-1-P_synth	PF01658.17	gi|298676024|ref|YP_003727774.1|	-	4.6e-32	110.5	0.5	1.5e-31	108.8	0.0	2.1	3	0	0	3	3	3	1	Myo-inositol-1-phosphate	synthase
NAD_binding_5	PF07994.12	gi|298676024|ref|YP_003727774.1|	-	0.012	15.0	0.0	0.032	13.6	0.0	1.8	2	0	0	2	2	2	0	Myo-inositol-1-phosphate	synthase
DUF1611_N	PF17396.2	gi|298676024|ref|YP_003727774.1|	-	0.052	13.8	0.0	0.11	12.7	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1611_N)	Rossmann-like	domain
Rubrerythrin	PF02915.17	gi|298676025|ref|YP_003727775.1|	-	1.7e-19	70.6	2.5	2.1e-19	70.3	2.5	1.1	1	0	0	1	1	1	1	Rubrerythrin
Ferritin_2	PF13668.6	gi|298676025|ref|YP_003727775.1|	-	1.6e-08	34.8	0.1	4.7e-08	33.3	0.1	1.7	1	1	0	1	1	1	1	Ferritin-like	domain
DUF2383	PF09537.10	gi|298676025|ref|YP_003727775.1|	-	2e-05	24.9	0.8	0.082	13.3	0.2	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF2383)
DUF1657	PF07870.11	gi|298676025|ref|YP_003727775.1|	-	0.26	11.2	2.9	8.2	6.4	0.5	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1657)
DUF2533	PF10752.9	gi|298676025|ref|YP_003727775.1|	-	0.31	11.5	2.5	1.1	9.8	0.1	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2533)
TBCC_N	PF16752.5	gi|298676025|ref|YP_003727775.1|	-	0.34	11.4	4.6	0.15	12.5	1.8	1.8	2	0	0	2	2	2	0	Tubulin-specific	chaperone	C	N-terminal	domain
YtxH	PF12732.7	gi|298676025|ref|YP_003727775.1|	-	3	8.4	4.8	14	6.3	2.1	2.8	2	1	1	3	3	3	0	YtxH-like	protein
Flavodoxin_1	PF00258.25	gi|298676026|ref|YP_003727776.1|	-	5.7e-10	39.6	0.0	1.2e-09	38.5	0.0	1.6	1	0	0	1	1	1	1	Flavodoxin
Lactamase_B	PF00753.27	gi|298676026|ref|YP_003727776.1|	-	3.6e-06	27.1	0.0	7.1e-06	26.2	0.0	1.6	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|298676026|ref|YP_003727776.1|	-	0.0059	16.2	0.0	0.0094	15.5	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
FMN_red	PF03358.15	gi|298676026|ref|YP_003727776.1|	-	0.072	12.8	0.2	0.86	9.3	0.2	2.3	1	1	0	1	1	1	0	NADPH-dependent	FMN	reductase
CGGC	PF08821.11	gi|298676027|ref|YP_003727777.1|	-	8.2e-34	116.0	3.8	9.3e-34	115.8	3.8	1.0	1	0	0	1	1	1	1	CGGC	domain
zf-C2H2	PF00096.26	gi|298676027|ref|YP_003727777.1|	-	1	10.0	7.1	5.8	7.6	0.1	3.3	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
Fer4_21	PF14697.6	gi|298676028|ref|YP_003727778.1|	-	1.4e-09	37.9	5.7	1.4e-09	37.9	5.7	2.3	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298676028|ref|YP_003727778.1|	-	1.5e-09	37.2	17.1	1.7e-05	24.4	4.8	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298676028|ref|YP_003727778.1|	-	3.2e-09	36.5	15.7	2.1e-06	27.6	3.8	3.3	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|298676028|ref|YP_003727778.1|	-	1.1e-07	32.4	11.9	0.0014	19.1	0.9	2.7	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298676028|ref|YP_003727778.1|	-	1.2e-06	29.4	10.1	0.001	20.0	0.3	2.7	3	0	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|298676028|ref|YP_003727778.1|	-	4.2e-06	26.8	18.3	4.7e-05	23.5	7.1	3.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298676028|ref|YP_003727778.1|	-	2.5e-05	24.1	17.7	5.4e-05	23.0	2.7	3.5	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298676028|ref|YP_003727778.1|	-	0.0001	22.3	16.2	0.00014	21.9	8.6	2.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|298676028|ref|YP_003727778.1|	-	0.00043	21.0	11.1	0.0063	17.2	1.3	2.7	1	1	1	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|298676028|ref|YP_003727778.1|	-	0.0063	17.0	10.5	0.26	11.8	0.8	2.7	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_19	PF06902.11	gi|298676028|ref|YP_003727778.1|	-	0.0096	16.0	2.2	11	6.1	0.1	3.3	2	1	1	3	3	3	1	Divergent	4Fe-4S	mono-cluster
Fer4_22	PF17179.4	gi|298676028|ref|YP_003727778.1|	-	0.16	12.9	1.9	0.16	12.9	1.9	2.7	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298676028|ref|YP_003727778.1|	-	1.3	9.6	18.5	1.1e+03	0.2	18.5	3.2	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|298676028|ref|YP_003727778.1|	-	1.6	9.4	18.8	0.38	11.4	4.3	3.6	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|298676028|ref|YP_003727778.1|	-	8.7	7.5	21.6	2.2	9.4	1.5	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
CBS	PF00571.28	gi|298676029|ref|YP_003727779.1|	-	2.6e-24	85.4	2.5	3.9e-12	46.4	0.2	2.5	1	1	2	3	3	3	2	CBS	domain
DUF1786	PF08735.10	gi|298676029|ref|YP_003727779.1|	-	0.0016	17.8	1.1	0.0022	17.3	1.1	1.2	1	0	0	1	1	1	1	Putative	pyruvate	format-lyase	activating	enzyme	(DUF1786)
Na_H_Exchanger	PF00999.21	gi|298676030|ref|YP_003727780.1|	-	2.2e-58	197.9	52.5	2.6e-58	197.7	52.5	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
Rick_17kDa_Anti	PF05433.15	gi|298676030|ref|YP_003727780.1|	-	1.2	9.0	4.5	17	5.4	0.4	2.4	2	0	0	2	2	2	0	Glycine	zipper	2TM	domain
COX6C	PF02937.15	gi|298676030|ref|YP_003727780.1|	-	2.2	8.5	0.0	2.2	8.5	0.0	3.1	4	0	0	4	4	4	0	Cytochrome	c	oxidase	subunit	VIc
CBS	PF00571.28	gi|298676031|ref|YP_003727781.1|	-	3.9e-23	81.6	2.9	1.8e-11	44.3	0.1	2.1	2	0	0	2	2	2	2	CBS	domain
Glyco_hydro_56	PF01630.18	gi|298676031|ref|YP_003727781.1|	-	0.26	10.2	0.0	0.35	9.8	0.0	1.2	1	0	0	1	1	1	0	Hyaluronidase
Na_H_Exchanger	PF00999.21	gi|298676032|ref|YP_003727782.1|	-	3.9e-53	180.6	50.4	4.8e-53	180.3	50.4	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
AAA_lid_1	PF17857.1	gi|298676032|ref|YP_003727782.1|	-	0.055	13.7	0.2	0.13	12.5	0.2	1.5	1	0	0	1	1	1	0	AAA+	lid	domain
TRAP-gamma	PF07074.12	gi|298676032|ref|YP_003727782.1|	-	2.1	7.9	9.0	2.5	7.6	0.8	2.9	3	0	0	3	3	3	0	Translocon-associated	protein,	gamma	subunit	(TRAP-gamma)
Radical_SAM	PF04055.21	gi|298676034|ref|YP_003727784.1|	-	6.1e-20	72.3	0.1	6.1e-20	72.3	0.1	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|298676034|ref|YP_003727784.1|	-	4.9e-05	23.6	0.2	0.00016	22.0	0.0	1.9	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|298676034|ref|YP_003727784.1|	-	5.9e-05	23.2	1.4	8e-05	22.8	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
HTH_5	PF01022.20	gi|298676035|ref|YP_003727785.1|	-	2e-14	53.2	0.7	2.8e-14	52.7	0.7	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|298676035|ref|YP_003727785.1|	-	5.8e-10	39.1	0.1	7.8e-10	38.7	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.6	gi|298676035|ref|YP_003727785.1|	-	0.0018	18.2	0.3	0.0024	17.8	0.3	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF2513	PF10711.9	gi|298676035|ref|YP_003727785.1|	-	0.0036	17.6	0.2	0.0073	16.6	0.1	1.5	1	1	0	1	1	1	1	Hypothetical	protein	(DUF2513)
Rio2_N	PF09202.11	gi|298676035|ref|YP_003727785.1|	-	0.011	15.9	1.4	0.03	14.5	1.4	1.7	1	1	0	1	1	1	0	Rio2,	N-terminal
DUF505	PF04458.12	gi|298676035|ref|YP_003727785.1|	-	0.029	12.8	0.1	0.029	12.8	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
ArsR	PF09824.9	gi|298676035|ref|YP_003727785.1|	-	0.029	14.0	0.1	0.04	13.5	0.1	1.2	1	0	0	1	1	1	0	ArsR	transcriptional	regulator
HTH_12	PF08461.10	gi|298676035|ref|YP_003727785.1|	-	0.065	13.2	0.2	0.12	12.3	0.2	1.6	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
NikR_C	PF08753.11	gi|298676036|ref|YP_003727786.1|	-	2.1e-32	111.1	0.8	3.1e-32	110.6	0.8	1.2	1	0	0	1	1	1	1	NikR	C	terminal	nickel	binding	domain
RHH_1	PF01402.21	gi|298676036|ref|YP_003727786.1|	-	4.5e-12	45.4	0.5	8e-12	44.6	0.1	1.6	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
HicB_lk_antitox	PF15919.5	gi|298676036|ref|YP_003727786.1|	-	0.001	19.2	0.0	0.0047	17.0	0.0	1.9	2	0	0	2	2	2	1	HicB_like	antitoxin	of	bacterial	toxin-antitoxin	system
RHH_8	PF17723.1	gi|298676036|ref|YP_003727786.1|	-	0.04	14.1	0.1	0.058	13.6	0.1	1.4	1	1	0	1	1	1	0	Ribbon-Helix-Helix	transcriptional	regulator	family
DUF4090	PF13319.6	gi|298676036|ref|YP_003727786.1|	-	0.13	12.6	0.1	0.36	11.1	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4090)
RHH_5	PF07878.11	gi|298676036|ref|YP_003727786.1|	-	0.2	11.6	0.0	0.33	10.9	0.0	1.4	1	0	0	1	1	1	0	CopG-like	RHH_1	or	ribbon-helix-helix	domain,	RHH_5
SAICAR_synt	PF01259.18	gi|298676037|ref|YP_003727787.1|	-	2.9e-62	210.6	1.8	3.4e-62	210.3	1.8	1.1	1	0	0	1	1	1	1	SAICAR	synthetase
Nre_N	PF04894.12	gi|298676038|ref|YP_003727788.1|	-	2.1e-105	352.4	0.0	2.7e-105	352.1	0.0	1.1	1	0	0	1	1	1	1	Archaeal	Nre,	N-terminal
Nre_C	PF04895.12	gi|298676038|ref|YP_003727788.1|	-	2.4e-41	140.1	0.0	4.4e-41	139.2	0.0	1.4	1	0	0	1	1	1	1	Archaeal	Nre,	C-terminal
Peptidase_C21	PF05381.12	gi|298676038|ref|YP_003727788.1|	-	0.024	15.0	0.1	0.12	12.7	0.0	2.1	1	1	1	2	2	2	0	Tymovirus	endopeptidase
HTH_24	PF13412.6	gi|298676039|ref|YP_003727789.1|	-	5.3e-05	22.7	0.0	0.00014	21.3	0.0	1.6	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Sigma70_r4	PF04545.16	gi|298676039|ref|YP_003727789.1|	-	6.4e-05	22.4	0.0	0.00013	21.4	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
Sigma70_r4_2	PF08281.12	gi|298676039|ref|YP_003727789.1|	-	0.00072	19.2	0.0	0.0015	18.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_3	PF01381.22	gi|298676039|ref|YP_003727789.1|	-	0.0011	19.0	0.0	0.0016	18.4	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix
MarR_2	PF12802.7	gi|298676039|ref|YP_003727789.1|	-	0.0024	17.7	0.0	0.0056	16.5	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.6	gi|298676039|ref|YP_003727789.1|	-	0.0055	16.7	0.0	0.011	15.7	0.0	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
KorB	PF08535.10	gi|298676039|ref|YP_003727789.1|	-	0.0083	16.1	0.0	0.011	15.8	0.0	1.4	1	1	0	1	1	1	1	KorB	domain
Sigma70_ECF	PF07638.11	gi|298676039|ref|YP_003727789.1|	-	0.0085	16.0	0.0	0.05	13.5	0.0	1.8	1	1	1	2	2	2	1	ECF	sigma	factor
KORA	PF16509.5	gi|298676039|ref|YP_003727789.1|	-	0.021	15.1	0.0	0.1	12.9	0.0	2.0	1	1	1	2	2	2	0	TrfB	plasmid	transcriptional	repressor
HTH_5	PF01022.20	gi|298676039|ref|YP_003727789.1|	-	0.027	14.3	0.0	0.064	13.1	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
GerE	PF00196.19	gi|298676039|ref|YP_003727789.1|	-	0.028	14.0	0.0	0.08	12.5	0.0	1.8	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
HTH_23	PF13384.6	gi|298676039|ref|YP_003727789.1|	-	0.04	13.7	0.0	0.09	12.6	0.0	1.7	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_11	PF08279.12	gi|298676039|ref|YP_003727789.1|	-	0.046	13.7	0.0	0.072	13.0	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
HTH_17	PF12728.7	gi|298676039|ref|YP_003727789.1|	-	0.1	12.8	0.0	0.22	11.8	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
YdaS_antitoxin	PF15943.5	gi|298676039|ref|YP_003727789.1|	-	0.14	12.0	0.0	0.41	10.5	0.0	1.8	2	0	0	2	2	2	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
HTH_10	PF04967.12	gi|298676039|ref|YP_003727789.1|	-	0.15	11.9	0.0	0.39	10.5	0.0	1.6	1	0	0	1	1	1	0	HTH	DNA	binding	domain
Phage_CI_repr	PF07022.13	gi|298676039|ref|YP_003727789.1|	-	0.15	12.1	0.0	0.16	12.1	0.0	1.2	1	0	0	1	1	1	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
HTH_40	PF14493.6	gi|298676039|ref|YP_003727789.1|	-	0.17	12.4	0.0	0.22	12.0	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
SUI1	PF01253.22	gi|298676040|ref|YP_003727790.1|	-	9.6e-22	77.3	0.1	1.2e-21	76.9	0.1	1.2	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
DTW	PF03942.15	gi|298676040|ref|YP_003727790.1|	-	0.019	14.7	1.0	0.024	14.4	1.0	1.2	1	0	0	1	1	1	0	DTW	domain
Img2	PF05046.14	gi|298676040|ref|YP_003727790.1|	-	0.029	14.7	0.1	0.063	13.6	0.1	1.7	1	1	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
CsgA	PF17334.2	gi|298676040|ref|YP_003727790.1|	-	0.11	13.3	0.1	0.15	12.8	0.1	1.2	1	0	0	1	1	1	0	Minor	curli	fiber	component	A
DUF192	PF02643.15	gi|298676041|ref|YP_003727791.1|	-	3.4e-25	88.0	0.0	3.8e-25	87.9	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1430
AIRS	PF00586.24	gi|298676042|ref|YP_003727792.1|	-	2.9e-45	152.9	0.4	7.7e-23	81.0	0.0	3.1	3	0	0	3	3	3	2	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.22	gi|298676042|ref|YP_003727792.1|	-	3.5e-43	147.4	1.9	2e-29	102.8	0.2	2.2	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
FGAR-AT_linker	PF18072.1	gi|298676042|ref|YP_003727792.1|	-	1.9e-07	31.5	0.1	8.5e-07	29.4	0.0	2.1	2	0	0	2	2	2	1	Formylglycinamide	ribonucleotide	amidotransferase	linker	domain
Fe_dep_repr_C	PF02742.15	gi|298676043|ref|YP_003727793.1|	-	2.3e-23	82.0	0.3	4.7e-23	81.0	0.3	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
FeoA	PF04023.14	gi|298676043|ref|YP_003727793.1|	-	6.2e-14	52.0	0.0	9.1e-13	48.3	0.0	2.2	2	0	0	2	2	2	1	FeoA	domain
UPF0547	PF10571.9	gi|298676044|ref|YP_003727794.1|	-	2.4e-05	24.3	12.2	0.014	15.5	0.2	2.8	2	1	0	2	2	2	2	Uncharacterised	protein	family	UPF0547
zinc_ribbon_2	PF13240.6	gi|298676044|ref|YP_003727794.1|	-	9.3e-05	22.0	14.2	0.0067	16.1	0.4	2.4	1	1	2	3	3	3	3	zinc-ribbon	domain
DZR	PF12773.7	gi|298676044|ref|YP_003727794.1|	-	0.00024	21.1	8.2	0.00044	20.2	8.2	1.4	1	1	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|298676044|ref|YP_003727794.1|	-	0.0064	15.9	14.3	0.041	13.3	0.6	2.5	1	1	2	3	3	3	3	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|298676044|ref|YP_003727794.1|	-	0.01	15.8	9.0	0.53	10.3	0.6	2.3	1	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
Rad50_zn_hook	PF04423.14	gi|298676044|ref|YP_003727794.1|	-	0.012	15.5	5.9	0.043	13.6	0.2	2.3	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
Cys_rich_CPCC	PF14206.6	gi|298676044|ref|YP_003727794.1|	-	0.024	14.5	5.9	1.6	8.6	0.0	2.2	2	1	0	2	2	2	0	Cysteine-rich	CPCC
zf-NADH-PPase	PF09297.11	gi|298676044|ref|YP_003727794.1|	-	0.031	13.9	6.9	0.85	9.3	0.2	3.2	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|298676044|ref|YP_003727794.1|	-	0.051	13.5	8.3	3.2	7.8	8.3	2.6	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
zinc-ribbons_6	PF07191.12	gi|298676044|ref|YP_003727794.1|	-	0.069	13.1	7.8	0.081	12.9	7.8	1.1	1	0	0	1	1	1	0	zinc-ribbons
Prok-RING_1	PF14446.6	gi|298676044|ref|YP_003727794.1|	-	0.1	12.5	7.5	0.56	10.2	3.1	2.2	1	1	2	3	3	3	0	Prokaryotic	RING	finger	family	1
DUF35_N	PF12172.8	gi|298676044|ref|YP_003727794.1|	-	0.14	12.1	7.1	0.39	10.6	0.0	2.8	2	1	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-C2H2	PF00096.26	gi|298676044|ref|YP_003727794.1|	-	0.18	12.3	9.8	1.6	9.4	0.2	3.3	4	0	0	4	4	3	0	Zinc	finger,	C2H2	type
Zn-C2H2_12	PF18112.1	gi|298676044|ref|YP_003727794.1|	-	0.18	12.3	3.0	0.36	11.4	0.3	2.3	2	0	0	2	2	2	0	Autophagy	receptor	zinc	finger-C2H2	domain
DNA_RNApol_7kD	PF03604.13	gi|298676044|ref|YP_003727794.1|	-	0.21	11.3	9.3	0.58	9.9	5.6	2.4	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
A2L_zn_ribbon	PF08792.10	gi|298676044|ref|YP_003727794.1|	-	0.23	11.2	9.7	4.8	7.0	0.2	3.2	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
zf-piccolo	PF05715.13	gi|298676044|ref|YP_003727794.1|	-	0.24	11.6	9.2	0.52	10.5	9.2	1.7	1	1	0	1	1	1	0	Piccolo	Zn-finger
OrfB_Zn_ribbon	PF07282.11	gi|298676044|ref|YP_003727794.1|	-	0.34	10.9	8.7	2.6	8.1	0.5	2.4	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-H2C2_2	PF13465.6	gi|298676044|ref|YP_003727794.1|	-	0.69	10.5	0.5	0.69	10.5	0.5	3.1	2	1	0	2	2	2	0	Zinc-finger	double	domain
CpXC	PF14353.6	gi|298676044|ref|YP_003727794.1|	-	0.71	9.9	8.8	0.8	9.8	0.5	2.9	1	1	2	3	3	3	0	CpXC	protein
HypA	PF01155.19	gi|298676044|ref|YP_003727794.1|	-	0.87	9.6	8.6	7.4	6.6	8.6	2.0	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_4	PF13717.6	gi|298676044|ref|YP_003727794.1|	-	1	9.3	10.0	9.2	6.3	0.4	3.5	2	1	0	3	3	3	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|298676044|ref|YP_003727794.1|	-	1.3	8.6	11.6	2.6	7.6	0.3	2.6	2	1	0	2	2	2	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|298676044|ref|YP_003727794.1|	-	1.4	9.1	12.8	1.2e+02	3.0	12.8	2.5	1	1	0	1	1	1	0	Zinc	ribbon	domain
zinc_ribbon_15	PF17032.5	gi|298676044|ref|YP_003727794.1|	-	1.8	9.4	11.3	4.3	8.1	11.3	1.6	1	1	0	1	1	1	0	zinc-ribbon	family
NRDD	PF13597.6	gi|298676044|ref|YP_003727794.1|	-	2.3	6.9	5.1	2.4	6.8	5.1	1.2	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
zf-C2H2_4	PF13894.6	gi|298676044|ref|YP_003727794.1|	-	2.7	9.1	0.1	2.7	9.1	0.1	3.1	2	1	1	3	3	3	0	C2H2-type	zinc	finger
Zn_ribbon_SprT	PF17283.2	gi|298676044|ref|YP_003727794.1|	-	2.8	7.9	10.9	6.8	6.7	0.2	3.2	3	0	0	3	3	3	0	SprT-like	zinc	ribbon	domain
YhfH	PF14149.6	gi|298676044|ref|YP_003727794.1|	-	4.8	7.2	12.1	13	5.8	0.6	3.1	1	1	2	3	3	3	0	YhfH-like	protein
zf-C2HC_2	PF13913.6	gi|298676044|ref|YP_003727794.1|	-	5.9	6.9	14.4	3.9	7.5	0.5	3.2	2	1	1	3	3	3	0	zinc-finger	of	a	C2HC-type
Ribosomal_L32p	PF01783.23	gi|298676044|ref|YP_003727794.1|	-	5.9	7.2	7.7	7.8	6.9	3.6	2.5	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
FeoB_N	PF02421.18	gi|298676045|ref|YP_003727795.1|	-	1.2e-50	171.1	0.0	2.3e-50	170.2	0.0	1.5	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Gate	PF07670.14	gi|298676045|ref|YP_003727795.1|	-	1.1e-20	73.9	21.4	3.4e-14	53.1	4.0	2.9	3	0	0	3	3	2	2	Nucleoside	recognition
MMR_HSR1	PF01926.23	gi|298676045|ref|YP_003727795.1|	-	2e-20	73.0	0.0	4.8e-20	71.7	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_Cyto	PF17910.1	gi|298676045|ref|YP_003727795.1|	-	2.8e-10	40.6	1.3	6e-10	39.5	1.3	1.6	1	0	0	1	1	1	1	FeoB	cytosolic	helical	domain
FeoB_C	PF07664.12	gi|298676045|ref|YP_003727795.1|	-	5.6e-10	38.8	2.4	5.6e-10	38.8	2.4	3.1	3	0	0	3	3	2	1	Ferrous	iron	transport	protein	B	C	terminus
AIG1	PF04548.16	gi|298676045|ref|YP_003727795.1|	-	0.0011	18.4	0.2	0.0029	17.0	0.0	1.8	2	0	0	2	2	2	1	AIG1	family
Roc	PF08477.13	gi|298676045|ref|YP_003727795.1|	-	0.0042	17.3	0.0	0.0098	16.1	0.0	1.7	1	1	0	1	1	1	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
RsgA_GTPase	PF03193.16	gi|298676045|ref|YP_003727795.1|	-	0.0065	16.4	0.5	5.3	6.9	0.1	2.8	2	1	0	2	2	2	2	RsgA	GTPase
GTP_EFTU	PF00009.27	gi|298676045|ref|YP_003727795.1|	-	0.012	15.2	0.0	0.041	13.4	0.0	1.8	1	1	0	1	1	1	0	Elongation	factor	Tu	GTP	binding	domain
PduV-EutP	PF10662.9	gi|298676045|ref|YP_003727795.1|	-	0.012	15.3	0.1	0.03	14.1	0.0	1.7	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
SRPRB	PF09439.10	gi|298676045|ref|YP_003727795.1|	-	0.016	14.6	0.0	0.031	13.7	0.0	1.4	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
MeaB	PF03308.16	gi|298676045|ref|YP_003727795.1|	-	0.047	12.7	0.0	2.1	7.3	0.0	2.5	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
ATP_bind_1	PF03029.17	gi|298676045|ref|YP_003727795.1|	-	0.05	13.4	0.1	0.14	11.9	0.0	1.8	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
Dynamin_N	PF00350.23	gi|298676045|ref|YP_003727795.1|	-	0.15	12.1	5.3	1.4	9.0	0.0	3.1	2	2	1	3	3	3	0	Dynamin	family
FMN_red	PF03358.15	gi|298676046|ref|YP_003727796.1|	-	5.6e-22	78.1	0.0	7.2e-22	77.8	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|298676046|ref|YP_003727796.1|	-	2.1e-07	30.9	0.0	2.9e-07	30.4	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
TRAM	PF01938.20	gi|298676047|ref|YP_003727797.1|	-	5.4e-16	58.3	1.1	6.2e-16	58.2	1.1	1.1	1	0	0	1	1	1	1	TRAM	domain
DUF111	PF01969.17	gi|298676048|ref|YP_003727798.1|	-	3.4e-126	421.3	0.6	3.9e-126	421.1	0.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF111
DUF1031	PF06275.11	gi|298676048|ref|YP_003727798.1|	-	0.62	10.4	5.7	3.4	8.0	0.8	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1031)
AAA	PF00004.29	gi|298676049|ref|YP_003727799.1|	-	1.5e-96	319.9	0.2	1.4e-47	161.4	0.0	2.9	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.18	gi|298676049|ref|YP_003727799.1|	-	6e-30	103.3	0.0	2.2e-29	101.5	0.0	2.0	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_lid_3	PF17862.1	gi|298676049|ref|YP_003727799.1|	-	7.3e-29	99.3	0.5	1.8e-13	50.0	0.2	2.7	2	0	0	2	2	2	2	AAA+	lid	domain
AAA_2	PF07724.14	gi|298676049|ref|YP_003727799.1|	-	1.4e-14	54.6	0.0	8.4e-07	29.3	0.0	2.8	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
CDC48_2	PF02933.17	gi|298676049|ref|YP_003727799.1|	-	8.2e-14	51.1	0.2	4.6e-13	48.8	0.2	2.2	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	domain	2
RuvB_N	PF05496.12	gi|298676049|ref|YP_003727799.1|	-	5.4e-13	49.0	0.0	4.3e-05	23.3	0.0	3.0	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_5	PF07728.14	gi|298676049|ref|YP_003727799.1|	-	8.6e-12	45.2	0.7	5.9e-05	23.1	0.1	3.8	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|298676049|ref|YP_003727799.1|	-	2e-11	44.5	0.0	0.00026	21.4	0.0	3.7	2	2	1	3	3	3	2	AAA	ATPase	domain
AAA_14	PF13173.6	gi|298676049|ref|YP_003727799.1|	-	5.4e-11	42.7	0.0	7.9e-06	25.9	0.0	3.2	3	0	0	3	3	3	2	AAA	domain
AAA_22	PF13401.6	gi|298676049|ref|YP_003727799.1|	-	9.7e-11	42.1	0.6	0.01	16.1	0.0	4.5	2	2	1	4	4	4	2	AAA	domain
AAA_33	PF13671.6	gi|298676049|ref|YP_003727799.1|	-	6.9e-09	36.0	0.0	0.00055	20.1	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.13	gi|298676049|ref|YP_003727799.1|	-	6.4e-08	32.2	0.0	0.0029	16.9	0.0	2.7	2	0	0	2	2	2	2	TIP49	P-loop	domain
IstB_IS21	PF01695.17	gi|298676049|ref|YP_003727799.1|	-	6.1e-07	29.3	0.1	0.051	13.3	0.0	2.7	3	0	0	3	3	2	2	IstB-like	ATP	binding	protein
Sigma54_activat	PF00158.26	gi|298676049|ref|YP_003727799.1|	-	6.4e-07	29.2	0.0	0.069	12.9	0.0	3.6	2	1	1	3	3	3	2	Sigma-54	interaction	domain
AAA_18	PF13238.6	gi|298676049|ref|YP_003727799.1|	-	1e-06	29.3	0.0	0.085	13.4	0.0	4.2	4	0	0	4	4	4	2	AAA	domain
Vps4_C	PF09336.10	gi|298676049|ref|YP_003727799.1|	-	1.2e-06	28.4	2.6	0.0038	17.2	0.1	3.1	3	0	0	3	3	2	2	Vps4	C	terminal	oligomerisation	domain
AAA_7	PF12775.7	gi|298676049|ref|YP_003727799.1|	-	5.7e-06	26.0	0.0	0.16	11.5	0.0	2.7	3	0	0	3	3	2	2	P-loop	containing	dynein	motor	region
Mg_chelatase	PF01078.21	gi|298676049|ref|YP_003727799.1|	-	1.7e-05	24.3	0.6	0.083	12.3	0.0	2.6	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
ABC_tran	PF00005.27	gi|298676049|ref|YP_003727799.1|	-	2.5e-05	24.8	0.8	0.19	12.2	0.0	3.0	3	0	0	3	3	2	2	ABC	transporter
PhoH	PF02562.16	gi|298676049|ref|YP_003727799.1|	-	3e-05	23.6	0.0	0.11	11.9	0.0	2.7	2	0	0	2	2	2	2	PhoH-like	protein
RNA_helicase	PF00910.22	gi|298676049|ref|YP_003727799.1|	-	5e-05	23.6	0.0	0.45	10.9	0.0	2.6	2	0	0	2	2	2	2	RNA	helicase
Zeta_toxin	PF06414.12	gi|298676049|ref|YP_003727799.1|	-	8.8e-05	21.9	0.0	0.36	10.1	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
Bac_DnaA	PF00308.18	gi|298676049|ref|YP_003727799.1|	-	0.00016	21.6	0.0	0.017	15.0	0.0	2.4	2	0	0	2	2	2	1	Bacterial	dnaA	protein
AAA_28	PF13521.6	gi|298676049|ref|YP_003727799.1|	-	0.00023	21.5	0.0	0.71	10.1	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
TsaE	PF02367.17	gi|298676049|ref|YP_003727799.1|	-	0.00026	21.0	0.1	1.3	9.0	0.0	2.9	2	1	1	3	3	3	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_25	PF13481.6	gi|298676049|ref|YP_003727799.1|	-	0.00033	20.3	0.0	2.6	7.6	0.0	3.5	3	0	0	3	3	3	1	AAA	domain
DUF2075	PF09848.9	gi|298676049|ref|YP_003727799.1|	-	0.00033	20.0	0.0	0.75	9.0	0.0	2.3	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
ResIII	PF04851.15	gi|298676049|ref|YP_003727799.1|	-	0.00066	19.7	0.0	1.8	8.5	0.0	2.9	2	2	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
DUF815	PF05673.13	gi|298676049|ref|YP_003727799.1|	-	0.00078	18.7	0.0	1.1	8.3	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
NB-ARC	PF00931.22	gi|298676049|ref|YP_003727799.1|	-	0.0008	18.7	0.0	0.52	9.5	0.0	3.0	3	0	0	3	3	2	1	NB-ARC	domain
AAA_24	PF13479.6	gi|298676049|ref|YP_003727799.1|	-	0.00097	18.9	0.0	1.5	8.5	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
ATPase	PF06745.13	gi|298676049|ref|YP_003727799.1|	-	0.0013	18.1	1.6	1.4	8.2	0.0	3.7	3	1	1	4	4	3	1	KaiC
Rad17	PF03215.15	gi|298676049|ref|YP_003727799.1|	-	0.0016	18.4	0.1	0.089	12.7	0.0	2.7	2	1	0	2	2	2	1	Rad17	P-loop	domain
Cytidylate_kin	PF02224.18	gi|298676049|ref|YP_003727799.1|	-	0.0018	18.1	0.1	0.86	9.3	0.0	2.5	2	0	0	2	2	2	1	Cytidylate	kinase
ATPase_2	PF01637.18	gi|298676049|ref|YP_003727799.1|	-	0.0019	18.2	1.6	0.84	9.5	0.1	3.9	3	2	1	4	4	3	1	ATPase	domain	predominantly	from	Archaea
AFG1_ATPase	PF03969.16	gi|298676049|ref|YP_003727799.1|	-	0.0021	17.0	0.0	0.6	8.9	0.0	2.3	2	0	0	2	2	2	1	AFG1-like	ATPase
AAA_11	PF13086.6	gi|298676049|ref|YP_003727799.1|	-	0.0022	17.8	0.0	0.61	9.8	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|298676049|ref|YP_003727799.1|	-	0.0023	17.7	0.4	1.9	8.1	0.0	2.9	3	0	0	3	3	2	1	AAA	domain
ATP-synt_ab	PF00006.25	gi|298676049|ref|YP_003727799.1|	-	0.0023	17.6	0.0	1.1	8.8	0.0	2.3	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_17	PF13207.6	gi|298676049|ref|YP_003727799.1|	-	0.004	17.6	0.0	0.2	12.1	0.0	3.0	2	0	0	2	2	2	1	AAA	domain
Sigma54_activ_2	PF14532.6	gi|298676049|ref|YP_003727799.1|	-	0.004	17.3	0.0	0.99	9.5	0.0	2.6	2	0	0	2	2	2	1	Sigma-54	interaction	domain
Guanylate_kin	PF00625.21	gi|298676049|ref|YP_003727799.1|	-	0.0054	16.4	0.7	8	6.1	0.0	3.8	2	2	2	4	4	3	0	Guanylate	kinase
Torsin	PF06309.11	gi|298676049|ref|YP_003727799.1|	-	0.0067	16.5	0.1	4.5	7.4	0.0	2.8	3	0	0	3	3	2	0	Torsin
TniB	PF05621.11	gi|298676049|ref|YP_003727799.1|	-	0.0075	15.7	0.1	6.6	6.1	0.0	3.6	5	0	0	5	5	3	0	Bacterial	TniB	protein
NACHT	PF05729.12	gi|298676049|ref|YP_003727799.1|	-	0.0076	16.2	0.2	5.8	6.8	0.0	3.6	4	0	0	4	4	3	0	NACHT	domain
AAA_19	PF13245.6	gi|298676049|ref|YP_003727799.1|	-	0.011	16.1	1.4	2	8.8	0.0	3.5	4	0	0	4	4	3	0	AAA	domain
AAA_3	PF07726.11	gi|298676049|ref|YP_003727799.1|	-	0.013	15.4	0.0	2.4	8.0	0.0	2.6	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DEAD	PF00270.29	gi|298676049|ref|YP_003727799.1|	-	0.013	15.2	0.2	12	5.6	0.0	3.9	3	1	1	4	4	4	0	DEAD/DEAH	box	helicase
Parvo_NS1	PF01057.17	gi|298676049|ref|YP_003727799.1|	-	0.02	14.0	0.0	3.9	6.5	0.0	2.2	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
Zot	PF05707.12	gi|298676049|ref|YP_003727799.1|	-	0.026	14.2	0.2	2.7	7.6	0.0	3.4	3	1	0	3	3	3	0	Zonular	occludens	toxin	(Zot)
UFD1	PF03152.14	gi|298676049|ref|YP_003727799.1|	-	0.027	14.0	0.0	0.11	12.0	0.0	1.8	1	1	1	2	2	2	0	Ubiquitin	fusion	degradation	protein	UFD1
SKI	PF01202.22	gi|298676049|ref|YP_003727799.1|	-	0.027	14.6	0.0	7.1	6.7	0.0	2.9	2	0	0	2	2	2	0	Shikimate	kinase
Viral_helicase1	PF01443.18	gi|298676049|ref|YP_003727799.1|	-	0.029	14.1	0.0	3.9	7.1	0.0	2.5	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_29	PF13555.6	gi|298676049|ref|YP_003727799.1|	-	0.057	13.2	0.0	12	5.7	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
IPT	PF01745.16	gi|298676049|ref|YP_003727799.1|	-	0.064	12.6	0.1	1.6	8.1	0.0	2.5	2	0	0	2	2	2	0	Isopentenyl	transferase
AAA_23	PF13476.6	gi|298676049|ref|YP_003727799.1|	-	0.13	12.7	0.8	4.7	7.6	0.0	3.0	2	1	0	2	2	2	0	AAA	domain
LID	PF17916.1	gi|298676049|ref|YP_003727799.1|	-	0.19	11.4	0.1	0.19	11.4	0.1	1.9	2	0	0	2	2	1	0	LIM	interaction	domain	(LID)
NTPase_1	PF03266.15	gi|298676049|ref|YP_003727799.1|	-	1.2	9.0	9.7	16	5.3	0.0	4.8	4	1	1	5	5	5	0	NTPase
PRC	PF05239.16	gi|298676050|ref|YP_003727800.1|	-	4.1e-12	46.0	0.1	5e-12	45.7	0.1	1.1	1	0	0	1	1	1	1	PRC-barrel	domain
Hydrolase_3	PF08282.12	gi|298676051|ref|YP_003727801.1|	-	1.9e-32	113.0	3.7	5.6e-21	75.4	1.5	2.2	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|298676051|ref|YP_003727801.1|	-	1.4e-10	41.8	0.1	0.00075	19.8	0.0	3.2	2	1	1	3	3	3	3	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.13	gi|298676051|ref|YP_003727801.1|	-	2.3e-08	33.9	0.1	7.5e-06	25.6	0.0	2.1	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
HAD	PF12710.7	gi|298676051|ref|YP_003727801.1|	-	5.8e-05	23.6	0.1	1.8	8.9	0.0	3.2	2	1	1	3	3	3	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.6	gi|298676051|ref|YP_003727801.1|	-	0.01	15.9	0.0	0.026	14.7	0.0	1.7	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
B1	PF02246.15	gi|298676051|ref|YP_003727801.1|	-	0.062	13.3	0.1	0.14	12.2	0.1	1.6	1	0	0	1	1	1	0	Protein	L	b1	domain
HAD_2	PF13419.6	gi|298676051|ref|YP_003727801.1|	-	0.068	13.2	0.1	0.18	11.8	0.0	1.9	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
Rad51	PF08423.11	gi|298676052|ref|YP_003727802.1|	-	6.1e-87	291.1	0.0	8.1e-87	290.7	0.0	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.21	gi|298676052|ref|YP_003727802.1|	-	1.3e-10	41.2	0.0	1.3e-08	34.6	0.0	2.1	1	1	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
HHH_5	PF14520.6	gi|298676052|ref|YP_003727802.1|	-	1.5e-09	38.3	0.0	3.2e-09	37.3	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
AAA_25	PF13481.6	gi|298676052|ref|YP_003727802.1|	-	2e-08	34.0	0.0	3e-08	33.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
ATPase	PF06745.13	gi|298676052|ref|YP_003727802.1|	-	8.7e-08	31.8	0.2	1.4e-07	31.1	0.2	1.4	1	1	0	1	1	1	1	KaiC
HHH_2	PF12826.7	gi|298676052|ref|YP_003727802.1|	-	3.5e-05	23.8	0.0	7.3e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
AAA	PF00004.29	gi|298676052|ref|YP_003727802.1|	-	0.00072	20.0	0.1	0.011	16.2	0.1	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.6	gi|298676052|ref|YP_003727802.1|	-	0.00074	19.3	0.0	0.0017	18.1	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|298676052|ref|YP_003727802.1|	-	0.0013	19.0	0.0	0.0031	17.8	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
Cdd1	PF11731.8	gi|298676052|ref|YP_003727802.1|	-	0.0031	17.7	0.0	0.007	16.6	0.0	1.6	1	0	0	1	1	1	1	Pathogenicity	locus
AAA_18	PF13238.6	gi|298676052|ref|YP_003727802.1|	-	0.005	17.4	0.1	0.081	13.5	0.1	2.6	2	1	0	2	2	2	1	AAA	domain
DNA_pol_lambd_f	PF10391.9	gi|298676052|ref|YP_003727802.1|	-	0.012	15.4	0.0	0.031	14.1	0.0	1.7	1	0	0	1	1	1	0	Fingers	domain	of	DNA	polymerase	lambda
Zeta_toxin	PF06414.12	gi|298676052|ref|YP_003727802.1|	-	0.018	14.3	0.1	5.6	6.2	0.0	2.5	2	1	0	2	2	2	0	Zeta	toxin
CobU	PF02283.16	gi|298676052|ref|YP_003727802.1|	-	0.028	14.0	0.1	0.45	10.1	0.1	2.2	1	1	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
SRP54	PF00448.22	gi|298676052|ref|YP_003727802.1|	-	0.031	13.9	0.0	0.051	13.2	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ATPase_2	PF01637.18	gi|298676052|ref|YP_003727802.1|	-	0.043	13.7	0.0	0.061	13.2	0.0	1.3	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
NACHT	PF05729.12	gi|298676052|ref|YP_003727802.1|	-	0.077	12.9	0.0	0.17	11.8	0.0	1.6	1	1	0	1	1	1	0	NACHT	domain
CTP_transf_like	PF01467.26	gi|298676053|ref|YP_003727803.1|	-	5.4e-12	46.1	0.0	6.7e-12	45.8	0.0	1.1	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|298676053|ref|YP_003727803.1|	-	0.028	14.3	0.0	0.05	13.5	0.0	1.5	1	0	0	1	1	1	0	FAD	synthetase
Ribosomal_L22e	PF01776.17	gi|298676053|ref|YP_003727803.1|	-	0.051	14.0	1.5	0.093	13.1	1.5	1.3	1	0	0	1	1	1	0	Ribosomal	L22e	protein	family
DUF4351	PF14261.6	gi|298676054|ref|YP_003727804.1|	-	0.00054	20.0	0.1	0.0032	17.5	0.1	2.2	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4351)
AP_endonuc_2	PF01261.24	gi|298676055|ref|YP_003727805.1|	-	4.2e-15	55.8	0.0	4.9e-15	55.5	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
HTH_24	PF13412.6	gi|298676056|ref|YP_003727806.1|	-	6.6e-07	28.8	0.2	1.6e-06	27.6	0.2	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.7	gi|298676056|ref|YP_003727806.1|	-	0.00012	22.1	0.0	0.0002	21.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|298676056|ref|YP_003727806.1|	-	0.00012	21.8	0.1	0.00026	20.8	0.1	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.7	gi|298676056|ref|YP_003727806.1|	-	0.00048	20.0	0.0	0.0012	18.7	0.0	1.6	2	0	0	2	2	2	1	MarR	family
TrmB	PF01978.19	gi|298676056|ref|YP_003727806.1|	-	0.0015	18.4	0.1	0.0027	17.6	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
RPA_C	PF08784.11	gi|298676056|ref|YP_003727806.1|	-	0.0023	18.6	0.0	0.0041	17.8	0.0	1.5	2	0	0	2	2	2	1	Replication	protein	A	C	terminal
MarR	PF01047.22	gi|298676056|ref|YP_003727806.1|	-	0.004	17.1	0.1	0.0064	16.4	0.1	1.3	1	0	0	1	1	1	1	MarR	family
GerE	PF00196.19	gi|298676056|ref|YP_003727806.1|	-	0.011	15.3	0.1	0.16	11.5	0.0	2.3	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
DUF2250	PF10007.9	gi|298676056|ref|YP_003727806.1|	-	0.018	15.2	0.1	0.029	14.5	0.1	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.20	gi|298676056|ref|YP_003727806.1|	-	0.051	13.9	0.1	0.086	13.2	0.1	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
B-block_TFIIIC	PF04182.12	gi|298676056|ref|YP_003727806.1|	-	0.081	13.1	0.1	0.14	12.3	0.0	1.5	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Cpn10	PF00166.21	gi|298676057|ref|YP_003727807.1|	-	4e-24	84.5	1.7	4.4e-24	84.3	1.7	1.0	1	0	0	1	1	1	1	Chaperonin	10	Kd	subunit
Cpn60_TCP1	PF00118.24	gi|298676058|ref|YP_003727808.1|	-	1.2e-99	334.2	15.7	2.4e-99	333.2	15.7	1.4	1	1	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
ABC_tran	PF00005.27	gi|298676059|ref|YP_003727809.1|	-	1e-32	113.5	0.0	1.6e-32	112.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298676059|ref|YP_003727809.1|	-	2.5e-12	47.2	0.2	8.9e-07	29.0	0.0	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|298676059|ref|YP_003727809.1|	-	2.2e-06	27.3	0.0	5.4e-06	26.0	0.0	1.5	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|298676059|ref|YP_003727809.1|	-	0.00083	19.1	0.1	0.0022	17.7	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|298676059|ref|YP_003727809.1|	-	0.0015	18.4	0.2	0.0069	16.1	0.2	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_13	PF13166.6	gi|298676059|ref|YP_003727809.1|	-	0.0075	15.0	0.2	1.2	7.7	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
Pr_beta_C	PF12465.8	gi|298676059|ref|YP_003727809.1|	-	0.034	13.6	0.0	0.073	12.5	0.0	1.6	1	0	0	1	1	1	0	Proteasome	beta	subunits	C	terminal
AAA_23	PF13476.6	gi|298676059|ref|YP_003727809.1|	-	0.035	14.6	0.5	0.069	13.6	0.5	1.4	1	0	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|298676059|ref|YP_003727809.1|	-	0.087	12.7	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	RsgA	GTPase
Ploopntkinase3	PF18751.1	gi|298676059|ref|YP_003727809.1|	-	0.19	11.6	0.0	17	5.3	0.0	2.2	2	0	0	2	2	2	0	P-loop	Nucleotide	Kinase3
CbiQ	PF02361.16	gi|298676060|ref|YP_003727810.1|	-	1.1e-42	146.1	11.5	1.1e-42	146.1	11.5	2.0	1	1	1	2	2	2	2	Cobalt	transport	protein
CbiN	PF02553.15	gi|298676061|ref|YP_003727811.1|	-	3.6e-27	94.1	0.9	4.9e-27	93.7	0.9	1.1	1	0	0	1	1	1	1	Cobalt	transport	protein	component	CbiN
DUF3552	PF12072.8	gi|298676061|ref|YP_003727811.1|	-	0.089	12.2	0.3	1.1	8.7	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3552)
CbiM	PF01891.16	gi|298676062|ref|YP_003727812.1|	-	9.7e-54	182.3	20.5	1.1e-53	182.2	20.5	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
TP_methylase	PF00590.20	gi|298676063|ref|YP_003727813.1|	-	1.3e-24	87.3	0.0	1e-23	84.4	0.0	1.9	1	1	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF460	PF04312.13	gi|298676063|ref|YP_003727813.1|	-	0.075	12.7	0.0	3.7	7.2	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF460)
DUF1912	PF08930.10	gi|298676063|ref|YP_003727813.1|	-	0.14	12.3	0.0	0.4	10.9	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1912)
CbiD	PF01888.17	gi|298676064|ref|YP_003727814.1|	-	3.3e-49	167.5	0.5	3.3e-49	167.5	0.5	1.6	2	0	0	2	2	2	1	CbiD
DNA_mis_repair	PF01119.19	gi|298676065|ref|YP_003727815.1|	-	3.6e-40	136.3	0.0	7.2e-40	135.4	0.0	1.5	1	0	0	1	1	1	1	DNA	mismatch	repair	protein,	C-terminal	domain
MutL_C	PF08676.11	gi|298676065|ref|YP_003727815.1|	-	4.3e-35	120.7	0.0	9e-35	119.6	0.0	1.5	1	0	0	1	1	1	1	MutL	C	terminal	dimerisation	domain
HATPase_c_3	PF13589.6	gi|298676065|ref|YP_003727815.1|	-	5.6e-15	55.4	0.6	5.6e-15	55.4	0.6	2.1	2	1	1	3	3	3	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.26	gi|298676065|ref|YP_003727815.1|	-	6.6e-09	36.3	0.1	2.7e-08	34.3	0.1	2.1	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
MutS_V	PF00488.21	gi|298676066|ref|YP_003727816.1|	-	8.1e-84	280.3	0.1	1.5e-83	279.5	0.1	1.4	1	0	0	1	1	1	1	MutS	domain	V
MutS_I	PF01624.20	gi|298676066|ref|YP_003727816.1|	-	2.4e-44	150.2	0.0	7.2e-44	148.6	0.0	1.9	2	0	0	2	2	2	1	MutS	domain	I
MutS_III	PF05192.18	gi|298676066|ref|YP_003727816.1|	-	8.9e-40	136.9	2.3	1.5e-38	133.0	0.1	2.4	2	0	0	2	2	2	1	MutS	domain	III
MutS_IV	PF05190.18	gi|298676066|ref|YP_003727816.1|	-	2.7e-30	104.6	0.9	8.1e-30	103.0	0.9	1.9	1	0	0	1	1	1	1	MutS	family	domain	IV
MutS_II	PF05188.17	gi|298676066|ref|YP_003727816.1|	-	8.2e-27	94.2	0.0	2.7e-26	92.5	0.0	2.0	1	0	0	1	1	1	1	MutS	domain	II
AAA_27	PF13514.6	gi|298676066|ref|YP_003727816.1|	-	0.038	13.6	0.0	0.078	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.6	gi|298676066|ref|YP_003727816.1|	-	0.13	12.0	0.0	0.33	10.7	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|298676066|ref|YP_003727816.1|	-	0.23	11.9	10.2	1.8	9.0	0.0	3.5	3	1	1	4	4	4	0	AAA	domain
FMN_red	PF03358.15	gi|298676067|ref|YP_003727817.1|	-	6.4e-14	52.0	0.0	9.1e-14	51.5	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|298676067|ref|YP_003727817.1|	-	0.00014	21.6	0.0	0.00018	21.3	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
Flavodoxin_1	PF00258.25	gi|298676067|ref|YP_003727817.1|	-	0.0003	21.0	0.1	0.0022	18.2	0.1	2.0	1	1	0	1	1	1	1	Flavodoxin
ABC2_membrane	PF01061.24	gi|298676068|ref|YP_003727818.1|	-	2.7e-21	76.0	26.3	2.7e-21	76.0	26.3	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|298676068|ref|YP_003727818.1|	-	1.8e-06	27.3	36.4	2.4e-06	26.9	36.4	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.27	gi|298676069|ref|YP_003727819.1|	-	3.7e-33	115.0	0.0	7.4e-33	114.0	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|298676069|ref|YP_003727819.1|	-	3.8e-15	56.5	0.0	8.1e-08	32.4	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|298676069|ref|YP_003727819.1|	-	7.4e-07	29.2	0.9	0.0011	18.7	0.1	2.5	2	1	1	3	3	3	2	AAA	ATPase	domain
SMC_N	PF02463.19	gi|298676069|ref|YP_003727819.1|	-	5.2e-05	22.8	0.1	0.00056	19.4	0.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF4162	PF13732.6	gi|298676069|ref|YP_003727819.1|	-	0.00023	21.8	0.2	0.00093	19.9	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.6	gi|298676069|ref|YP_003727819.1|	-	0.00046	20.8	1.1	0.00074	20.1	0.4	1.7	2	1	0	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|298676069|ref|YP_003727819.1|	-	0.044	14.2	0.9	1.4	9.4	0.4	3.1	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.6	gi|298676069|ref|YP_003727819.1|	-	0.044	13.5	0.0	0.1	12.3	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.17	gi|298676069|ref|YP_003727819.1|	-	0.056	13.2	0.1	2.3	7.9	0.0	2.4	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_13	PF13166.6	gi|298676069|ref|YP_003727819.1|	-	0.065	11.9	0.0	0.096	11.3	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|298676069|ref|YP_003727819.1|	-	0.11	12.2	0.1	9.8	5.9	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
FeThRed_B	PF02943.15	gi|298676070|ref|YP_003727820.1|	-	1.4e-32	111.8	0.8	1.7e-32	111.6	0.8	1.1	1	0	0	1	1	1	1	Ferredoxin	thioredoxin	reductase	catalytic	beta	chain
Glutaredoxin	PF00462.24	gi|298676071|ref|YP_003727821.1|	-	1.5e-14	53.9	0.2	2.2e-14	53.4	0.2	1.2	1	0	0	1	1	1	1	Glutaredoxin
DUF1462	PF07315.11	gi|298676071|ref|YP_003727821.1|	-	3.2e-05	24.1	0.1	3.9e-05	23.9	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1462)
Thioredoxin_4	PF13462.6	gi|298676071|ref|YP_003727821.1|	-	0.0013	18.9	0.6	0.6	10.3	0.0	2.0	1	1	1	2	2	2	2	Thioredoxin
GST_N_3	PF13417.6	gi|298676071|ref|YP_003727821.1|	-	0.0055	17.1	0.0	0.0068	16.8	0.0	1.1	1	0	0	1	1	1	1	Glutathione	S-transferase,	N-terminal	domain
SH3BGR	PF04908.15	gi|298676071|ref|YP_003727821.1|	-	0.006	16.7	0.1	0.0065	16.6	0.1	1.1	1	0	0	1	1	1	1	SH3-binding,	glutamic	acid-rich	protein
Thioredoxin_3	PF13192.6	gi|298676071|ref|YP_003727821.1|	-	0.0066	16.5	0.2	0.011	15.7	0.2	1.4	1	1	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_2	PF13098.6	gi|298676071|ref|YP_003727821.1|	-	0.032	14.7	1.1	0.094	13.2	1.1	1.6	1	1	0	1	1	1	0	Thioredoxin-like	domain
Rieske	PF00355.26	gi|298676072|ref|YP_003727822.1|	-	1e-17	63.9	0.0	1.2e-17	63.6	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.6	gi|298676072|ref|YP_003727822.1|	-	6.6e-13	48.5	0.0	7.8e-13	48.3	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
DUF3179	PF11376.8	gi|298676073|ref|YP_003727823.1|	-	2e-98	329.3	3.6	3.6e-97	325.2	3.6	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3179)
DHBP_synthase	PF00926.19	gi|298676074|ref|YP_003727824.1|	-	6.1e-58	195.5	0.0	7.5e-58	195.2	0.0	1.1	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
CTP-dep_RFKase	PF01982.16	gi|298676075|ref|YP_003727825.1|	-	7.5e-47	158.4	0.0	1.2e-46	157.7	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
MarR	PF01047.22	gi|298676075|ref|YP_003727825.1|	-	0.0034	17.3	0.1	0.0064	16.4	0.1	1.5	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.6	gi|298676075|ref|YP_003727825.1|	-	0.021	14.8	0.1	0.05	13.6	0.1	1.7	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
YscJ_FliF	PF01514.17	gi|298676075|ref|YP_003727825.1|	-	0.14	11.8	0.7	0.23	11.1	0.1	1.5	2	0	0	2	2	2	0	Secretory	protein	of	YscJ/FliF	family
Fibrillarin	PF01269.17	gi|298676076|ref|YP_003727826.1|	-	6.9e-86	287.0	0.1	7.6e-86	286.9	0.1	1.0	1	0	0	1	1	1	1	Fibrillarin
Nop	PF01798.18	gi|298676077|ref|YP_003727827.1|	-	3.2e-54	183.8	0.0	4.8e-54	183.3	0.0	1.2	1	0	0	1	1	1	1	snoRNA	binding	domain,	fibrillarin
GHMP_kinases_C	PF08544.13	gi|298676078|ref|YP_003727828.1|	-	3.7e-08	33.6	0.0	9.4e-08	32.3	0.0	1.7	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.26	gi|298676078|ref|YP_003727828.1|	-	4.2e-07	30.1	1.9	5.5e-07	29.7	0.7	1.9	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
DUF2953	PF11167.8	gi|298676079|ref|YP_003727829.1|	-	5.8e-10	39.1	0.0	1.5e-09	37.8	0.0	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2953)
Spore_YtfJ	PF09579.10	gi|298676080|ref|YP_003727830.1|	-	3e-19	69.0	5.5	3.9e-19	68.6	5.5	1.2	1	0	0	1	1	1	1	Sporulation	protein	YtfJ	(Spore_YtfJ)
Helicase_C_2	PF13307.6	gi|298676081|ref|YP_003727831.1|	-	6.7e-28	98.0	0.0	2.8e-27	95.9	0.0	2.0	2	0	0	2	2	2	1	Helicase	C-terminal	domain
DEAD_2	PF06733.15	gi|298676081|ref|YP_003727831.1|	-	3.3e-19	69.2	4.6	2.7e-18	66.2	4.6	2.1	1	1	0	1	1	1	1	DEAD_2
DEAD	PF00270.29	gi|298676081|ref|YP_003727831.1|	-	4.8e-06	26.5	1.0	0.00077	19.3	0.2	3.1	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|298676081|ref|YP_003727831.1|	-	2.4e-05	24.4	8.0	0.0059	16.6	8.0	2.5	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
PhoH	PF02562.16	gi|298676081|ref|YP_003727831.1|	-	3.2e-05	23.5	0.3	0.00055	19.5	0.1	2.5	2	0	0	2	2	2	1	PhoH-like	protein
DUF2075	PF09848.9	gi|298676081|ref|YP_003727831.1|	-	0.00038	19.8	0.4	0.074	12.3	0.1	2.4	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
Zot	PF05707.12	gi|298676081|ref|YP_003727831.1|	-	0.00049	19.8	0.2	0.11	12.2	0.0	2.7	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
AAA_34	PF13872.6	gi|298676081|ref|YP_003727831.1|	-	0.0099	14.8	0.0	0.024	13.5	0.0	1.6	2	0	0	2	2	2	1	P-loop	containing	NTP	hydrolase	pore-1
AAA_30	PF13604.6	gi|298676081|ref|YP_003727831.1|	-	0.023	14.4	0.0	0.072	12.8	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
ATPase	PF06745.13	gi|298676081|ref|YP_003727831.1|	-	0.023	14.0	0.0	0.054	12.8	0.0	1.7	1	0	0	1	1	1	0	KaiC
HK	PF02110.15	gi|298676081|ref|YP_003727831.1|	-	0.028	13.8	0.0	0.052	12.9	0.0	1.4	1	0	0	1	1	1	0	Hydroxyethylthiazole	kinase	family
DUF3110	PF11360.8	gi|298676081|ref|YP_003727831.1|	-	0.12	12.6	0.1	0.98	9.7	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3110)
WGG	PF10273.9	gi|298676081|ref|YP_003727831.1|	-	0.17	12.6	0.5	11	6.8	0.0	3.6	5	0	0	5	5	4	0	Pre-rRNA-processing	protein	TSR2
AAA	PF00004.29	gi|298676081|ref|YP_003727831.1|	-	0.2	12.1	5.1	11	6.5	1.1	3.7	3	1	0	3	3	3	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Fer4	PF00037.27	gi|298676082|ref|YP_003727832.1|	-	4.4e-16	57.9	20.4	1.8e-08	33.9	6.3	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298676082|ref|YP_003727832.1|	-	1.8e-11	43.6	19.7	3.6e-06	26.8	5.3	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|298676082|ref|YP_003727832.1|	-	1e-10	41.5	24.4	9.1e-08	32.1	13.4	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|298676082|ref|YP_003727832.1|	-	2.6e-10	40.3	10.9	3.6e-10	39.9	10.9	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298676082|ref|YP_003727832.1|	-	4e-10	40.1	12.8	7.5e-10	39.3	12.8	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|298676082|ref|YP_003727832.1|	-	5.9e-10	39.1	15.7	1.6e-09	37.8	15.7	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298676082|ref|YP_003727832.1|	-	1.2e-09	39.0	11.4	0.00016	22.5	2.8	2.0	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|298676082|ref|YP_003727832.1|	-	1.2e-08	34.6	15.5	0.00027	20.8	3.9	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|298676082|ref|YP_003727832.1|	-	1.8e-08	34.3	13.4	0.00018	21.8	1.9	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|298676082|ref|YP_003727832.1|	-	0.0002	21.8	13.8	0.04	14.5	3.1	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_11	PF13247.6	gi|298676082|ref|YP_003727832.1|	-	0.00024	21.2	5.2	0.00025	21.1	5.2	1.0	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|298676082|ref|YP_003727832.1|	-	0.00026	21.4	14.8	0.045	14.2	14.8	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298676082|ref|YP_003727832.1|	-	0.0003	20.9	15.6	0.0012	19.1	3.8	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|298676082|ref|YP_003727832.1|	-	0.00031	21.5	18.8	0.034	15.1	4.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|298676082|ref|YP_003727832.1|	-	0.0011	19.8	9.6	0.099	13.5	1.7	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|298676082|ref|YP_003727832.1|	-	0.0021	18.6	18.7	0.022	15.3	4.3	2.9	2	1	1	3	3	3	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|298676082|ref|YP_003727832.1|	-	0.066	14.0	18.3	3.8	8.3	18.3	2.9	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
Semialdhyde_dh	PF01118.24	gi|298676083|ref|YP_003727833.1|	-	1.1e-33	116.2	0.0	1.7e-33	115.7	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.18	gi|298676083|ref|YP_003727833.1|	-	1.3e-33	116.7	0.0	2.1e-33	116.0	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
DXP_reductoisom	PF02670.16	gi|298676083|ref|YP_003727833.1|	-	0.009	16.7	0.0	0.017	15.8	0.0	1.5	1	0	0	1	1	1	1	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
NAD_binding_10	PF13460.6	gi|298676083|ref|YP_003727833.1|	-	0.025	14.5	0.0	0.042	13.7	0.0	1.4	1	0	0	1	1	1	0	NAD(P)H-binding
DapB_N	PF01113.20	gi|298676083|ref|YP_003727833.1|	-	0.034	14.3	0.0	0.052	13.7	0.0	1.4	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
AA_kinase	PF00696.28	gi|298676084|ref|YP_003727834.1|	-	5.2e-27	95.0	0.6	2.2e-26	93.0	0.6	1.8	1	1	0	1	1	1	1	Amino	acid	kinase	family
CbiZ	PF01955.18	gi|298676085|ref|YP_003727835.1|	-	1.1e-41	143.1	0.0	1.2e-41	142.9	0.0	1.0	1	0	0	1	1	1	1	Adenosylcobinamide	amidohydrolase
AP_endonuc_2	PF01261.24	gi|298676086|ref|YP_003727836.1|	-	1.5e-16	60.5	0.1	4.4e-16	59.0	0.0	1.7	2	1	0	2	2	2	1	Xylose	isomerase-like	TIM	barrel
HOOK	PF05622.12	gi|298676086|ref|YP_003727836.1|	-	0.15	10.2	0.6	0.2	9.8	0.6	1.1	1	0	0	1	1	1	0	HOOK	protein
HTH_5	PF01022.20	gi|298676087|ref|YP_003727837.1|	-	2.4e-08	33.7	0.4	5.7e-08	32.5	0.2	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|298676087|ref|YP_003727837.1|	-	4.1e-07	30.0	0.0	1e-06	28.7	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
MarR	PF01047.22	gi|298676087|ref|YP_003727837.1|	-	0.00015	21.7	0.2	0.00053	19.9	0.1	1.9	2	0	0	2	2	2	1	MarR	family
HTH_24	PF13412.6	gi|298676087|ref|YP_003727837.1|	-	0.00057	19.4	0.0	0.0014	18.1	0.0	1.8	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF4430	PF14478.6	gi|298676087|ref|YP_003727837.1|	-	0.0037	17.8	1.4	0.028	15.0	1.4	2.2	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4430)
HTH_11	PF08279.12	gi|298676087|ref|YP_003727837.1|	-	0.0065	16.4	0.1	0.015	15.2	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_45	PF14947.6	gi|298676087|ref|YP_003727837.1|	-	0.0089	16.0	0.2	0.071	13.1	0.1	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix
DUF4423	PF14394.6	gi|298676087|ref|YP_003727837.1|	-	0.052	13.2	0.1	0.084	12.6	0.1	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HTH_1	PF00126.27	gi|298676087|ref|YP_003727837.1|	-	0.054	13.5	0.0	0.092	12.7	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Rrf2	PF02082.20	gi|298676087|ref|YP_003727837.1|	-	0.1	12.9	0.1	0.29	11.5	0.0	1.7	2	0	0	2	2	2	0	Transcriptional	regulator
MarR_2	PF12802.7	gi|298676087|ref|YP_003727837.1|	-	0.14	12.1	0.0	0.25	11.3	0.0	1.4	1	0	0	1	1	1	0	MarR	family
NUMOD1	PF07453.13	gi|298676087|ref|YP_003727837.1|	-	0.62	10.4	2.9	5.6	7.4	0.0	3.2	3	0	0	3	3	3	0	NUMOD1	domain
MutS_V	PF00488.21	gi|298676088|ref|YP_003727838.1|	-	4.8e-11	43.0	0.1	8.6e-11	42.2	0.1	1.4	1	0	0	1	1	1	1	MutS	domain	V
HHH_5	PF14520.6	gi|298676088|ref|YP_003727838.1|	-	3.8e-06	27.4	0.3	1.5e-05	25.5	0.0	2.2	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
5_3_exonuc	PF01367.20	gi|298676088|ref|YP_003727838.1|	-	0.00025	21.6	1.7	0.57	10.8	0.0	4.2	2	2	2	4	4	4	2	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_2	PF12826.7	gi|298676088|ref|YP_003727838.1|	-	0.0031	17.6	0.1	0.0094	16.0	0.1	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
AAA	PF00004.29	gi|298676088|ref|YP_003727838.1|	-	0.017	15.6	0.0	0.04	14.3	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Baculo_LEF5	PF04838.12	gi|298676088|ref|YP_003727838.1|	-	0.81	9.7	4.9	0.23	11.5	0.2	2.4	2	1	1	3	3	3	0	Baculoviridae	late	expression	factor	5
AAA_23	PF13476.6	gi|298676088|ref|YP_003727838.1|	-	9.1	6.7	12.0	48	4.4	0.0	2.9	2	1	0	2	2	2	0	AAA	domain
IGPD	PF00475.18	gi|298676089|ref|YP_003727839.1|	-	7e-63	211.2	1.2	8.7e-63	210.9	1.2	1.1	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
His_biosynth	PF00977.21	gi|298676090|ref|YP_003727840.1|	-	4.6e-75	252.0	2.7	5.3e-75	251.8	2.7	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Dus	PF01207.17	gi|298676090|ref|YP_003727840.1|	-	7e-11	41.8	0.2	5.4e-05	22.4	0.0	2.1	1	1	1	2	2	2	2	Dihydrouridine	synthase	(Dus)
DHO_dh	PF01180.21	gi|298676090|ref|YP_003727840.1|	-	8.7e-09	35.0	1.0	1e-06	28.2	0.1	2.1	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
ThiG	PF05690.14	gi|298676090|ref|YP_003727840.1|	-	4.8e-07	29.3	1.6	0.016	14.5	0.2	2.1	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.15	gi|298676090|ref|YP_003727840.1|	-	2e-06	27.4	0.7	8.6e-06	25.4	0.1	1.9	2	0	0	2	2	2	1	Nitronate	monooxygenase
IMPDH	PF00478.25	gi|298676090|ref|YP_003727840.1|	-	2.8e-06	26.6	4.1	2e-05	23.8	3.9	1.9	1	1	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
TMP-TENI	PF02581.17	gi|298676090|ref|YP_003727840.1|	-	5.1e-06	25.9	1.0	0.00023	20.5	0.1	2.1	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase
NanE	PF04131.14	gi|298676090|ref|YP_003727840.1|	-	8.2e-06	25.1	0.3	0.049	12.8	0.1	2.1	2	0	0	2	2	2	2	Putative	N-acetylmannosamine-6-phosphate	epimerase
PcrB	PF01884.17	gi|298676090|ref|YP_003727840.1|	-	3.6e-05	23.3	2.6	0.0021	17.6	0.1	2.1	2	0	0	2	2	2	2	PcrB	family
G3P_antiterm	PF04309.12	gi|298676090|ref|YP_003727840.1|	-	0.00013	21.4	1.5	0.12	11.8	0.2	2.3	2	0	0	2	2	2	2	Glycerol-3-phosphate	responsive	antiterminator
DUF561	PF04481.12	gi|298676090|ref|YP_003727840.1|	-	0.00026	20.2	0.1	0.00042	19.6	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF561)
FMN_dh	PF01070.18	gi|298676090|ref|YP_003727840.1|	-	0.00089	18.4	0.6	0.63	9.0	0.0	2.1	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
Trp_syntA	PF00290.20	gi|298676090|ref|YP_003727840.1|	-	0.0011	17.9	1.1	0.06	12.2	0.2	2.1	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
IGPS	PF00218.21	gi|298676090|ref|YP_003727840.1|	-	0.0025	17.1	0.2	0.025	13.8	0.0	2.0	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
GRDA	PF04723.14	gi|298676090|ref|YP_003727840.1|	-	0.013	15.3	0.1	2.1	8.1	0.1	2.3	1	1	1	2	2	2	0	Glycine	reductase	complex	selenoprotein	A
Glu_synthase	PF01645.17	gi|298676090|ref|YP_003727840.1|	-	0.051	12.7	0.4	0.18	10.9	0.0	1.8	2	0	0	2	2	2	0	Conserved	region	in	glutamate	synthase
NAD_binding_3	PF03447.16	gi|298676090|ref|YP_003727840.1|	-	0.079	13.6	0.0	0.4	11.4	0.0	1.9	2	0	0	2	2	2	0	Homoserine	dehydrogenase,	NAD	binding	domain
ETF_alpha	PF00766.19	gi|298676090|ref|YP_003727840.1|	-	0.11	12.5	0.4	7.1	6.7	0.0	2.4	2	0	0	2	2	2	0	Electron	transfer	flavoprotein	FAD-binding	domain
HisG	PF01634.18	gi|298676091|ref|YP_003727841.1|	-	2.1e-49	167.6	0.2	3e-49	167.1	0.2	1.2	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.11	gi|298676091|ref|YP_003727841.1|	-	8e-28	96.4	0.3	3.7e-27	94.3	0.2	2.2	3	0	0	3	3	3	1	HisG,	C-terminal	domain
SBP_bac_3	PF00497.20	gi|298676091|ref|YP_003727841.1|	-	0.002	17.6	0.0	0.0028	17.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
NMT1	PF09084.11	gi|298676091|ref|YP_003727841.1|	-	0.0027	17.7	0.0	0.071	13.0	0.0	2.2	1	1	1	2	2	2	1	NMT1/THI5	like
Response_reg	PF00072.24	gi|298676092|ref|YP_003727842.1|	-	5.7e-30	103.8	0.5	6.5e-30	103.6	0.5	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
CbiQ	PF02361.16	gi|298676093|ref|YP_003727843.1|	-	1.1e-35	123.2	9.0	1.3e-35	123.0	9.0	1.0	1	0	0	1	1	1	1	Cobalt	transport	protein
Cyto_heme_lyase	PF01265.17	gi|298676093|ref|YP_003727843.1|	-	0.056	13.0	0.2	0.39	10.3	0.1	1.9	1	1	1	2	2	2	0	Cytochrome	c/c1	heme	lyase
Met_10	PF02475.16	gi|298676094|ref|YP_003727844.1|	-	5.9e-51	173.1	0.2	7.1e-51	172.8	0.2	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
UPF0020	PF01170.18	gi|298676094|ref|YP_003727844.1|	-	2.8e-05	23.9	0.0	0.00073	19.3	0.0	2.1	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_15	PF09445.10	gi|298676094|ref|YP_003727844.1|	-	3.4e-05	23.5	0.1	8.3e-05	22.2	0.0	1.6	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
Cons_hypoth95	PF03602.15	gi|298676094|ref|YP_003727844.1|	-	3.8e-05	23.4	0.0	6.8e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
PRMT5	PF05185.16	gi|298676094|ref|YP_003727844.1|	-	0.0006	19.7	0.1	0.0012	18.7	0.0	1.5	2	0	0	2	2	2	1	PRMT5	arginine-N-methyltransferase
Methyltransf_25	PF13649.6	gi|298676094|ref|YP_003727844.1|	-	0.022	15.4	0.0	0.05	14.3	0.0	1.6	2	0	0	2	2	2	0	Methyltransferase	domain
Stap_Strp_tox_C	PF02876.17	gi|298676095|ref|YP_003727845.1|	-	0.037	14.3	0.5	8.3	6.8	0.0	2.1	2	0	0	2	2	2	0	Staphylococcal/Streptococcal	toxin,	beta-grasp	domain
Myosin_N	PF02736.19	gi|298676095|ref|YP_003727845.1|	-	1.7	8.5	6.1	0.19	11.6	1.2	1.8	2	0	0	2	2	2	0	Myosin	N-terminal	SH3-like	domain
Methyltransf_25	PF13649.6	gi|298676096|ref|YP_003727846.1|	-	1.1e-19	71.0	0.0	1.7e-19	70.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|298676096|ref|YP_003727846.1|	-	8.1e-19	68.0	0.0	1e-18	67.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|298676096|ref|YP_003727846.1|	-	1.1e-18	67.7	0.0	1.6e-18	67.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|298676096|ref|YP_003727846.1|	-	3e-17	62.8	0.0	3.7e-17	62.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|298676096|ref|YP_003727846.1|	-	7e-14	52.4	0.0	1.3e-13	51.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|298676096|ref|YP_003727846.1|	-	5.1e-13	48.9	0.1	3.1e-12	46.3	0.1	1.9	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
NodS	PF05401.11	gi|298676096|ref|YP_003727846.1|	-	1.8e-05	24.5	0.0	2.5e-05	24.0	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
CMAS	PF02353.20	gi|298676096|ref|YP_003727846.1|	-	2.4e-05	23.8	0.0	3.8e-05	23.1	0.0	1.3	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
DREV	PF05219.12	gi|298676096|ref|YP_003727846.1|	-	0.0001	21.5	0.0	0.00018	20.7	0.0	1.4	1	1	0	1	1	1	1	DREV	methyltransferase
Methyltransf_4	PF02390.17	gi|298676096|ref|YP_003727846.1|	-	0.00025	20.6	0.0	0.00047	19.7	0.0	1.4	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_18	PF12847.7	gi|298676096|ref|YP_003727846.1|	-	0.00043	20.2	0.0	0.0013	18.7	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
PCMT	PF01135.19	gi|298676096|ref|YP_003727846.1|	-	0.00045	20.0	0.0	0.00064	19.5	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF938	PF06080.12	gi|298676096|ref|YP_003727846.1|	-	0.00066	19.5	0.0	0.001	18.9	0.0	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF938)
PrmA	PF06325.13	gi|298676096|ref|YP_003727846.1|	-	0.0011	18.5	0.0	0.0017	17.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
RrnaAD	PF00398.20	gi|298676096|ref|YP_003727846.1|	-	0.0019	17.3	0.0	0.0027	16.8	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
MTS	PF05175.14	gi|298676096|ref|YP_003727846.1|	-	0.0071	15.9	0.0	0.01	15.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
MetW	PF07021.12	gi|298676096|ref|YP_003727846.1|	-	0.022	14.4	0.0	0.038	13.6	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
TehB	PF03848.14	gi|298676096|ref|YP_003727846.1|	-	0.057	12.8	0.0	0.086	12.2	0.0	1.3	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
UPF0020	PF01170.18	gi|298676096|ref|YP_003727846.1|	-	0.15	11.7	0.0	0.21	11.2	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
BPD_transp_1	PF00528.22	gi|298676097|ref|YP_003727847.1|	-	4.4e-22	78.7	14.7	4.4e-22	78.7	14.7	1.3	1	1	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|298676098|ref|YP_003727848.1|	-	6.1e-26	91.3	14.6	8.2e-26	90.9	14.6	1.2	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.27	gi|298676099|ref|YP_003727849.1|	-	1.9e-34	119.1	0.0	3.2e-34	118.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|298676099|ref|YP_003727849.1|	-	8.1e-10	39.0	0.1	8.3e-05	22.5	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_16	PF13191.6	gi|298676099|ref|YP_003727849.1|	-	5.1e-05	23.7	0.0	0.00011	22.7	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.6	gi|298676099|ref|YP_003727849.1|	-	0.0001	22.2	0.3	0.00037	20.3	0.3	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_30	PF13604.6	gi|298676099|ref|YP_003727849.1|	-	0.00081	19.2	0.0	0.0015	18.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|298676099|ref|YP_003727849.1|	-	0.00089	19.5	0.0	0.0022	18.3	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|298676099|ref|YP_003727849.1|	-	0.0012	18.5	0.0	0.0025	17.5	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_5	PF07728.14	gi|298676099|ref|YP_003727849.1|	-	0.0018	18.3	0.0	0.0039	17.2	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
T2SSE	PF00437.20	gi|298676099|ref|YP_003727849.1|	-	0.003	16.7	0.0	0.0049	16.0	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
RsgA_GTPase	PF03193.16	gi|298676099|ref|YP_003727849.1|	-	0.0059	16.5	0.1	0.017	15.0	0.0	1.7	2	0	0	2	2	2	1	RsgA	GTPase
Mg_chelatase	PF01078.21	gi|298676099|ref|YP_003727849.1|	-	0.0065	15.9	0.0	0.012	15.0	0.0	1.5	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_23	PF13476.6	gi|298676099|ref|YP_003727849.1|	-	0.0092	16.5	0.3	0.022	15.3	0.3	1.6	1	0	0	1	1	1	1	AAA	domain
G-alpha	PF00503.20	gi|298676099|ref|YP_003727849.1|	-	0.01	15.0	0.0	0.021	14.0	0.0	1.4	1	1	0	1	1	1	0	G-protein	alpha	subunit
AAA_33	PF13671.6	gi|298676099|ref|YP_003727849.1|	-	0.013	15.6	0.0	0.1	12.7	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.6	gi|298676099|ref|YP_003727849.1|	-	0.014	15.1	0.0	0.33	10.6	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
DEAD	PF00270.29	gi|298676099|ref|YP_003727849.1|	-	0.016	14.9	0.0	0.028	14.2	0.0	1.3	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
Rad17	PF03215.15	gi|298676099|ref|YP_003727849.1|	-	0.021	14.7	0.0	0.052	13.5	0.0	1.6	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_19	PF13245.6	gi|298676099|ref|YP_003727849.1|	-	0.023	15.0	0.0	0.051	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.19	gi|298676099|ref|YP_003727849.1|	-	0.041	13.5	0.0	0.2	11.2	0.0	2.0	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA	PF00004.29	gi|298676099|ref|YP_003727849.1|	-	0.058	13.8	0.0	0.15	12.5	0.0	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC2_membrane_3	PF12698.7	gi|298676099|ref|YP_003727849.1|	-	0.084	12.0	0.4	0.14	11.3	0.4	1.3	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
NACHT	PF05729.12	gi|298676099|ref|YP_003727849.1|	-	0.12	12.3	0.0	0.23	11.4	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
SRP54	PF00448.22	gi|298676099|ref|YP_003727849.1|	-	0.13	11.9	0.0	0.35	10.5	0.0	1.7	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_18	PF13238.6	gi|298676099|ref|YP_003727849.1|	-	0.15	12.6	0.0	0.9	10.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.12	gi|298676099|ref|YP_003727849.1|	-	0.18	11.0	0.0	0.33	10.2	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
OpuAC	PF04069.12	gi|298676100|ref|YP_003727850.1|	-	5.2e-62	209.7	1.3	7.4e-62	209.2	1.3	1.2	1	0	0	1	1	1	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
Oxidored_q3	PF00499.20	gi|298676100|ref|YP_003727850.1|	-	0.089	12.5	0.1	0.13	12.0	0.1	1.2	1	0	0	1	1	1	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
TPP_enzyme_N	PF02776.18	gi|298676101|ref|YP_003727851.1|	-	3e-51	173.4	0.0	1.4e-50	171.3	0.0	2.0	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|298676101|ref|YP_003727851.1|	-	2.1e-39	134.7	0.1	3.9e-39	133.9	0.1	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|298676101|ref|YP_003727851.1|	-	7.6e-33	113.2	0.0	2.6e-32	111.4	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
DXP_synthase_N	PF13292.6	gi|298676101|ref|YP_003727851.1|	-	0.0025	17.1	0.0	0.007	15.6	0.0	1.7	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
CO_dh	PF02552.16	gi|298676101|ref|YP_003727851.1|	-	0.011	15.6	0.0	0.021	14.6	0.0	1.5	1	0	0	1	1	1	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
Aldedh	PF00171.22	gi|298676102|ref|YP_003727852.1|	-	9e-149	495.9	0.1	1e-148	495.7	0.1	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.14	gi|298676102|ref|YP_003727852.1|	-	0.0047	16.0	0.0	0.016	14.3	0.0	1.8	1	1	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
Taxilin	PF09728.9	gi|298676102|ref|YP_003727852.1|	-	0.037	13.2	1.5	0.053	12.7	1.5	1.2	1	0	0	1	1	1	0	Myosin-like	coiled-coil	protein
Aldedh	PF00171.22	gi|298676104|ref|YP_003727854.1|	-	3.9e-143	477.3	0.0	4.4e-143	477.2	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.14	gi|298676104|ref|YP_003727854.1|	-	0.015	14.4	1.5	0.032	13.3	0.3	2.0	2	1	0	2	2	2	0	Acyl-CoA	reductase	(LuxC)
nsp9	PF08710.10	gi|298676104|ref|YP_003727854.1|	-	0.095	13.1	0.0	0.2	12.1	0.0	1.4	1	0	0	1	1	1	0	nsp9	replicase
DUF2117	PF09890.9	gi|298676104|ref|YP_003727854.1|	-	0.1	12.1	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2117)
Tmemb_14	PF03647.13	gi|298676105|ref|YP_003727855.1|	-	0.11	13.3	12.4	0.11	13.3	1.3	3.3	3	1	1	4	4	4	0	Transmembrane	proteins	14C
UPF0542	PF15086.6	gi|298676105|ref|YP_003727855.1|	-	0.38	10.7	1.3	9	6.3	0.0	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0542
DUF5518	PF17647.1	gi|298676106|ref|YP_003727856.1|	-	2.2e-11	44.0	30.7	2.4e-11	43.8	30.7	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5518)
IF-2B	PF01008.17	gi|298676107|ref|YP_003727857.1|	-	8.4e-85	284.4	3.6	9.5e-85	284.2	3.6	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
Atg14	PF10186.9	gi|298676109|ref|YP_003727859.1|	-	0.0026	16.9	12.2	0.0026	16.9	12.2	3.1	2	1	0	3	3	3	1	Vacuolar	sorting	38	and	autophagy-related	subunit	14
AAA_13	PF13166.6	gi|298676109|ref|YP_003727859.1|	-	0.0065	15.2	42.3	0.17	10.5	21.4	2.1	1	1	1	2	2	2	2	AAA	domain
TACC_C	PF05010.14	gi|298676109|ref|YP_003727859.1|	-	0.0065	16.3	3.0	0.0065	16.3	3.0	4.3	2	1	1	3	3	2	1	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
TssO	PF17561.2	gi|298676109|ref|YP_003727859.1|	-	0.021	14.9	7.0	0.021	14.9	7.0	5.4	2	2	3	5	5	5	0	Type	VI	secretion	system,	TssO
DUF2730	PF10805.8	gi|298676109|ref|YP_003727859.1|	-	0.056	13.5	24.5	0.13	12.4	4.6	4.8	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF2730)
Allexi_40kDa	PF05549.11	gi|298676109|ref|YP_003727859.1|	-	0.16	11.5	26.5	0.38	10.2	0.4	3.6	2	1	1	4	4	4	0	Allexivirus	40kDa	protein
Tektin	PF03148.14	gi|298676109|ref|YP_003727859.1|	-	0.16	10.7	33.7	0.065	12.0	10.8	4.1	2	1	1	3	3	3	0	Tektin	family
T3SSipB	PF16535.5	gi|298676109|ref|YP_003727859.1|	-	0.17	12.4	19.9	2.5	8.6	8.8	3.8	3	1	0	3	3	3	0	Type	III	cell	invasion	protein	SipB
Aurora-A_bind	PF09041.10	gi|298676109|ref|YP_003727859.1|	-	0.43	10.7	7.6	3.1	7.9	0.5	3.1	3	0	0	3	3	2	0	Aurora-A	binding
FliJ	PF02050.16	gi|298676109|ref|YP_003727859.1|	-	0.46	10.7	29.1	5.5	7.2	4.0	4.3	3	3	1	4	4	4	0	Flagellar	FliJ	protein
sCache_2	PF17200.4	gi|298676109|ref|YP_003727859.1|	-	0.65	9.8	8.5	0.59	10.0	0.9	3.3	2	1	1	3	3	3	0	Single	Cache	domain	2
Baculo_PEP_C	PF04513.12	gi|298676109|ref|YP_003727859.1|	-	0.75	9.8	26.1	4	7.5	2.7	4.9	1	1	5	7	7	7	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF948	PF06103.11	gi|298676109|ref|YP_003727859.1|	-	0.86	9.9	13.8	4	7.8	0.5	4.6	2	1	2	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF2968	PF11180.8	gi|298676109|ref|YP_003727859.1|	-	1.3	8.6	13.2	0.13	11.8	1.1	3.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2968)
WXG100	PF06013.12	gi|298676109|ref|YP_003727859.1|	-	1.4	9.2	11.4	34	4.8	0.1	5.2	3	1	0	4	4	4	0	Proteins	of	100	residues	with	WXG
DUF4407	PF14362.6	gi|298676109|ref|YP_003727859.1|	-	1.4	8.2	23.3	0.46	9.8	5.6	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4407)
Wtap	PF17098.5	gi|298676109|ref|YP_003727859.1|	-	1.5	8.7	23.4	4.6	7.1	3.8	3.8	2	1	0	2	2	2	0	WTAP/Mum2p	family
DUF1664	PF07889.12	gi|298676109|ref|YP_003727859.1|	-	1.7	8.7	31.4	0.051	13.6	3.3	5.1	2	2	4	6	6	6	0	Protein	of	unknown	function	(DUF1664)
DUF3450	PF11932.8	gi|298676109|ref|YP_003727859.1|	-	3.5	6.8	30.2	0.98	8.7	7.7	3.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3450)
CENP-F_leu_zip	PF10473.9	gi|298676109|ref|YP_003727859.1|	-	4.3	7.3	54.9	0.56	10.2	10.3	4.4	2	1	2	4	4	4	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DASH_Spc19	PF08287.11	gi|298676109|ref|YP_003727859.1|	-	6.3	6.7	42.8	0.31	10.9	0.3	4.3	3	1	1	4	4	4	0	Spc19
Sec8_exocyst	PF04048.14	gi|298676109|ref|YP_003727859.1|	-	6.8	6.6	26.8	2.7	7.9	10.8	4.1	3	1	1	4	4	4	0	Sec8	exocyst	complex	component	specific	domain
Spc7	PF08317.11	gi|298676109|ref|YP_003727859.1|	-	7	5.4	51.1	0.14	11.1	15.1	3.9	2	1	2	4	4	4	0	Spc7	kinetochore	protein
She9_MDM33	PF05546.11	gi|298676109|ref|YP_003727859.1|	-	7.1	6.4	26.0	0.12	12.1	6.3	3.3	3	1	0	3	3	3	0	She9	/	Mdm33	family
Exonuc_VII_L	PF02601.15	gi|298676109|ref|YP_003727859.1|	-	7.9	6.0	32.8	37	3.8	0.4	3.3	1	1	1	2	2	1	0	Exonuclease	VII,	large	subunit
LPP	PF04728.13	gi|298676109|ref|YP_003727859.1|	-	7.9	7.0	22.6	3.9	8.0	0.2	5.8	4	1	0	4	4	4	0	Lipoprotein	leucine-zipper
Peptidase_S49	PF01343.18	gi|298676111|ref|YP_003727861.1|	-	6.9e-44	149.5	0.0	9.9e-44	149.0	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	S49
CLP_protease	PF00574.23	gi|298676111|ref|YP_003727861.1|	-	0.0013	18.7	1.0	0.0088	15.9	0.3	2.1	2	0	0	2	2	2	1	Clp	protease
Asparaginase_C	PF17763.1	gi|298676111|ref|YP_003727861.1|	-	0.006	16.8	0.1	0.0098	16.1	0.1	1.4	1	0	0	1	1	1	1	Glutaminase/Asparaginase	C-terminal	domain
Peripla_BP_4	PF13407.6	gi|298676111|ref|YP_003727861.1|	-	0.027	14.0	0.3	0.047	13.3	0.3	1.4	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
Sigma_reg_N	PF13800.6	gi|298676111|ref|YP_003727861.1|	-	0.1	12.9	0.2	0.21	11.9	0.2	1.5	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
tRNA-synt_1g	PF09334.11	gi|298676112|ref|YP_003727862.1|	-	4.3e-152	506.4	2.5	6.2e-152	505.9	2.5	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA_bind	PF01588.20	gi|298676112|ref|YP_003727862.1|	-	5.1e-26	90.6	1.2	1.1e-25	89.6	1.2	1.6	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
tRNA-synt_1	PF00133.22	gi|298676112|ref|YP_003727862.1|	-	5.5e-17	61.2	1.8	2.9e-08	32.5	0.7	3.9	2	2	1	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|298676112|ref|YP_003727862.1|	-	3.5e-15	56.3	0.7	7.7e-15	55.2	0.7	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.19	gi|298676112|ref|YP_003727862.1|	-	4.5e-14	52.5	5.4	2e-10	40.5	0.1	2.6	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.18	gi|298676112|ref|YP_003727862.1|	-	0.00026	20.0	0.0	0.062	12.2	0.0	2.6	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
BBIP10	PF14777.6	gi|298676112|ref|YP_003727862.1|	-	0.23	11.1	2.8	0.65	9.6	2.8	1.7	1	0	0	1	1	1	0	Cilia	BBSome	complex	subunit	10
CYTH	PF01928.21	gi|298676113|ref|YP_003727863.1|	-	5.8e-38	130.6	3.2	6.6e-38	130.4	3.2	1.0	1	0	0	1	1	1	1	CYTH	domain
Med20	PF08612.11	gi|298676113|ref|YP_003727863.1|	-	0.00065	19.1	0.3	0.0015	18.0	0.1	1.6	1	1	1	2	2	2	1	TATA-binding	related	factor	(TRF)	of	subunit	20	of	Mediator	complex
Rootletin	PF15035.6	gi|298676113|ref|YP_003727863.1|	-	0.06	13.4	0.1	0.099	12.7	0.1	1.4	1	1	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
OB_aCoA_assoc	PF01796.17	gi|298676114|ref|YP_003727864.1|	-	2.4e-18	65.9	0.0	3.3e-18	65.4	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
DUF35_N	PF12172.8	gi|298676114|ref|YP_003727864.1|	-	3.1e-10	39.7	0.9	4.3e-10	39.3	0.9	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
FdhE	PF04216.12	gi|298676114|ref|YP_003727864.1|	-	0.00027	20.9	0.4	0.00033	20.7	0.4	1.1	1	0	0	1	1	1	1	Protein	involved	in	formate	dehydrogenase	formation
zinc-ribbons_6	PF07191.12	gi|298676114|ref|YP_003727864.1|	-	0.064	13.2	0.3	0.093	12.7	0.3	1.2	1	0	0	1	1	1	0	zinc-ribbons
Laminin_EGF	PF00053.24	gi|298676114|ref|YP_003727864.1|	-	0.069	13.3	1.8	0.13	12.5	1.8	1.4	1	0	0	1	1	1	0	Laminin	EGF	domain
Thiolase_N	PF00108.23	gi|298676115|ref|YP_003727865.1|	-	9.2e-25	87.5	1.0	5.7e-24	84.9	1.0	2.1	1	1	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|298676115|ref|YP_003727865.1|	-	3.8e-12	45.9	2.2	2.4e-11	43.4	1.1	2.7	2	1	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.26	gi|298676115|ref|YP_003727865.1|	-	1.6e-08	34.4	5.9	8.3e-07	28.8	4.2	2.7	1	1	1	2	2	2	2	Beta-ketoacyl	synthase,	N-terminal	domain
Ketoacyl-synt_C	PF02801.22	gi|298676115|ref|YP_003727865.1|	-	0.015	15.3	0.4	0.98	9.5	0.1	2.9	2	0	0	2	2	2	0	Beta-ketoacyl	synthase,	C-terminal	domain
ACP_syn_III_C	PF08541.10	gi|298676116|ref|YP_003727866.1|	-	2.6e-10	40.4	0.0	6.5e-10	39.0	0.0	1.7	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HMG_CoA_synt_C	PF08540.10	gi|298676116|ref|YP_003727866.1|	-	1.6e-06	28.0	0.1	6.5e-05	22.7	0.0	2.3	1	1	1	2	2	2	1	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
HMG_CoA_synt_N	PF01154.17	gi|298676116|ref|YP_003727866.1|	-	0.045	13.6	0.3	0.062	13.2	0.3	1.2	1	0	0	1	1	1	0	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
Activator-TraM	PF11657.8	gi|298676116|ref|YP_003727866.1|	-	0.074	12.9	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	activator	TraM
HTH_3	PF01381.22	gi|298676117|ref|YP_003727867.1|	-	3.8e-08	33.2	0.0	9.9e-08	31.9	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|298676117|ref|YP_003727867.1|	-	5.8e-05	23.0	0.0	0.00014	21.8	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|298676117|ref|YP_003727867.1|	-	0.0095	16.3	0.0	0.02	15.2	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
MqsA_antitoxin	PF15731.5	gi|298676117|ref|YP_003727867.1|	-	0.038	14.1	0.0	0.38	10.8	0.0	2.1	2	0	0	2	2	2	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
DUF2436	PF10365.9	gi|298676117|ref|YP_003727867.1|	-	0.13	12.0	0.0	0.2	11.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2436)
OrfB_Zn_ribbon	PF07282.11	gi|298676119|ref|YP_003727869.1|	-	7.5e-25	86.6	1.6	2.5e-24	85.0	1.1	2.1	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298676119|ref|YP_003727869.1|	-	5.8e-10	39.4	1.1	1.4e-09	38.2	1.1	1.6	1	0	0	1	1	1	1	Probable	transposase
HypA	PF01155.19	gi|298676119|ref|YP_003727869.1|	-	0.068	13.2	0.1	0.12	12.4	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
UPF0547	PF10571.9	gi|298676119|ref|YP_003727869.1|	-	0.073	13.2	1.1	0.89	9.7	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DNA_RNApol_7kD	PF03604.13	gi|298676119|ref|YP_003727869.1|	-	0.44	10.3	5.5	1.7	8.4	5.5	1.9	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2387	PF09526.10	gi|298676119|ref|YP_003727869.1|	-	1.2	9.3	4.2	13	6.1	1.9	3.0	2	1	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
zinc_ribbon_4	PF13717.6	gi|298676119|ref|YP_003727869.1|	-	8.5	6.4	7.3	1.2e+02	2.7	7.6	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
PAPS_reduct	PF01507.19	gi|298676120|ref|YP_003727870.1|	-	3.1e-46	157.6	0.0	5.6e-46	156.7	0.0	1.4	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
PUA	PF01472.20	gi|298676120|ref|YP_003727870.1|	-	4.4e-16	58.6	0.2	9.5e-16	57.5	0.2	1.6	1	0	0	1	1	1	1	PUA	domain
Fer4_9	PF13187.6	gi|298676120|ref|YP_003727870.1|	-	6.4e-07	29.4	9.4	6.4e-07	29.4	9.4	2.5	3	0	0	3	3	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|298676120|ref|YP_003727870.1|	-	1.5e-06	28.7	13.6	1.5e-06	28.7	13.6	2.4	3	0	0	3	3	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|298676120|ref|YP_003727870.1|	-	3.8e-06	26.5	23.8	9.8e-06	25.2	3.4	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|298676120|ref|YP_003727870.1|	-	2.7e-05	24.0	15.5	0.0076	16.3	3.4	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|298676120|ref|YP_003727870.1|	-	9.4e-05	22.5	14.8	9.4e-05	22.5	14.8	2.5	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|298676120|ref|YP_003727870.1|	-	0.00034	21.1	11.0	0.012	16.1	0.4	3.1	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|298676120|ref|YP_003727870.1|	-	0.00042	20.4	14.3	0.00042	20.4	14.3	2.7	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|298676120|ref|YP_003727870.1|	-	0.00097	19.3	8.8	0.00097	19.3	8.8	2.3	3	1	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|298676120|ref|YP_003727870.1|	-	0.015	16.2	12.5	0.025	15.5	2.5	3.5	2	1	1	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|298676120|ref|YP_003727870.1|	-	0.015	15.7	1.8	0.015	15.7	1.8	3.5	4	0	0	4	4	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|298676120|ref|YP_003727870.1|	-	0.049	14.6	21.8	0.13	13.3	5.7	3.1	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Herpes_IE68	PF02479.16	gi|298676120|ref|YP_003727870.1|	-	0.075	12.6	0.0	0.15	11.7	0.0	1.4	1	0	0	1	1	1	0	Herpesvirus	immediate	early	protein
Fer4_8	PF13183.6	gi|298676120|ref|YP_003727870.1|	-	0.94	10.0	22.2	1.6	9.2	3.4	4.2	4	1	2	6	6	6	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|298676120|ref|YP_003727870.1|	-	1.2	9.4	24.9	0.25	11.5	4.3	3.2	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|298676120|ref|YP_003727870.1|	-	1.6	9.3	11.7	3.6	8.2	2.4	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
TPR_8	PF13181.6	gi|298676121|ref|YP_003727871.1|	-	2e-09	36.9	7.8	4.3e-05	23.4	0.6	2.7	3	0	0	3	3	2	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|298676121|ref|YP_003727871.1|	-	4.7e-09	35.7	7.1	0.00015	21.6	0.7	2.6	3	0	0	3	3	2	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|298676121|ref|YP_003727871.1|	-	9.2e-09	35.5	10.0	8e-07	29.3	3.8	2.4	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|298676121|ref|YP_003727871.1|	-	3.2e-08	33.1	8.4	0.00074	19.2	0.9	2.6	3	0	0	3	3	2	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|298676121|ref|YP_003727871.1|	-	3.8e-05	24.1	0.5	0.078	13.8	0.1	2.8	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|298676121|ref|YP_003727871.1|	-	4e-05	24.0	1.0	6.2e-05	23.4	0.2	1.7	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|298676121|ref|YP_003727871.1|	-	4.2e-05	23.1	3.7	0.0017	18.0	0.3	2.7	1	1	1	2	2	2	2	TPR	repeat
TPR_17	PF13431.6	gi|298676121|ref|YP_003727871.1|	-	4.3e-05	23.6	1.7	0.0011	19.2	0.1	2.8	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|298676121|ref|YP_003727871.1|	-	7.9e-05	23.2	1.0	0.00013	22.5	1.0	1.4	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_5	PF12688.7	gi|298676121|ref|YP_003727871.1|	-	0.00027	21.2	0.3	0.57	10.4	0.0	2.7	1	1	2	3	3	3	2	Tetratrico	peptide	repeat
TPR_10	PF13374.6	gi|298676121|ref|YP_003727871.1|	-	0.0014	18.4	2.0	0.57	10.1	0.1	2.4	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|298676121|ref|YP_003727871.1|	-	0.0051	16.7	1.2	0.34	11.0	0.2	2.5	2	0	0	2	2	2	1	Tetratricopeptide	repeat
Wzy_C_2	PF11846.8	gi|298676121|ref|YP_003727871.1|	-	0.016	15.1	0.1	0.023	14.6	0.1	1.3	1	0	0	1	1	1	0	Virulence	factor	membrane-bound	polymerase,	C-terminal
ANAPC3	PF12895.7	gi|298676121|ref|YP_003727871.1|	-	0.042	14.1	3.1	0.2	11.9	3.1	2.0	1	1	1	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_4	PF07721.14	gi|298676121|ref|YP_003727871.1|	-	0.13	13.0	0.0	0.45	11.3	0.0	1.9	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|298676121|ref|YP_003727871.1|	-	0.15	12.8	0.6	12	6.8	0.1	2.6	2	1	0	2	2	2	0	Tetratricopeptide	repeat
SeleniumBinding	PF11524.8	gi|298676121|ref|YP_003727871.1|	-	0.21	12.1	0.4	16	6.0	0.0	2.2	1	1	1	2	2	2	0	Selenium	binding	protein
AICARFT_IMPCHas	PF01808.18	gi|298676122|ref|YP_003727872.1|	-	4.1e-101	338.3	0.0	6.3e-101	337.7	0.0	1.3	1	0	0	1	1	1	1	AICARFT/IMPCHase	bienzyme
MGS	PF02142.22	gi|298676122|ref|YP_003727872.1|	-	4.9e-28	97.2	0.1	1.2e-27	95.9	0.1	1.7	1	0	0	1	1	1	1	MGS-like	domain
MgsA_C	PF12002.8	gi|298676122|ref|YP_003727872.1|	-	0.047	13.6	0.0	0.14	12.1	0.0	1.8	1	0	0	1	1	1	0	MgsA	AAA+	ATPase	C	terminal
NSP2_assoc	PF14758.6	gi|298676122|ref|YP_003727872.1|	-	0.18	12.1	0.0	0.32	11.3	0.0	1.3	1	0	0	1	1	1	0	Non-essential	region	of	nsp2	of	arterivirus	polyprotein
DUF1724	PF08350.10	gi|298676123|ref|YP_003727873.1|	-	1.7e-22	79.3	1.6	3.2e-22	78.4	1.6	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1724)
HTH_5	PF01022.20	gi|298676123|ref|YP_003727873.1|	-	1.4e-05	24.9	1.1	2.2e-05	24.2	0.1	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HemN_C	PF06969.16	gi|298676123|ref|YP_003727873.1|	-	0.0005	20.1	0.0	0.0043	17.1	0.0	2.3	2	0	0	2	2	2	1	HemN	C-terminal	domain
MarR_2	PF12802.7	gi|298676123|ref|YP_003727873.1|	-	0.0023	17.8	0.0	0.0048	16.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|298676123|ref|YP_003727873.1|	-	0.004	17.1	0.0	0.0098	15.8	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|298676123|ref|YP_003727873.1|	-	0.0072	16.4	0.0	0.015	15.4	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF1803	PF08820.10	gi|298676123|ref|YP_003727873.1|	-	0.023	14.7	0.0	0.058	13.4	0.0	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
HTH_27	PF13463.6	gi|298676123|ref|YP_003727873.1|	-	0.072	13.6	0.0	0.23	12.0	0.0	1.8	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_11	PF08279.12	gi|298676123|ref|YP_003727873.1|	-	0.087	12.8	0.3	0.37	10.8	0.0	2.1	2	0	0	2	2	2	0	HTH	domain
TrmB	PF01978.19	gi|298676123|ref|YP_003727873.1|	-	0.12	12.2	0.0	0.27	11.1	0.0	1.6	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
UbiA	PF01040.18	gi|298676124|ref|YP_003727874.1|	-	6.9e-17	61.6	9.9	9.9e-17	61.1	9.9	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
YwiC	PF14256.6	gi|298676124|ref|YP_003727874.1|	-	0.6	10.4	0.0	0.6	10.4	0.0	3.0	3	1	1	4	4	4	0	YwiC-like	protein
Pyridoxal_deC	PF00282.19	gi|298676126|ref|YP_003727876.1|	-	1.2e-29	103.2	0.0	5.5e-29	101.0	0.0	1.8	1	1	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Aminotran_1_2	PF00155.21	gi|298676126|ref|YP_003727876.1|	-	1.2e-10	41.1	0.0	2.2e-09	37.0	0.0	2.1	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|298676126|ref|YP_003727876.1|	-	4.1e-09	35.9	0.1	4.4e-08	32.5	0.0	1.9	2	0	0	2	2	2	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|298676126|ref|YP_003727876.1|	-	0.0006	19.2	0.0	0.0008	18.8	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.21	gi|298676126|ref|YP_003727876.1|	-	0.0039	16.5	0.0	0.0056	16.0	0.0	1.4	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cdc6_C	PF09079.11	gi|298676128|ref|YP_003727877.1|	-	2.7e-18	65.7	0.1	5.9e-18	64.6	0.1	1.6	1	0	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
AAA_16	PF13191.6	gi|298676128|ref|YP_003727877.1|	-	3.5e-11	43.8	0.0	2.6e-10	41.0	0.0	2.3	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|298676128|ref|YP_003727877.1|	-	4.4e-10	40.0	0.0	8.7e-10	39.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|298676128|ref|YP_003727877.1|	-	6.2e-07	29.9	0.0	1.7e-06	28.5	0.0	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|298676128|ref|YP_003727877.1|	-	1e-06	28.9	0.2	2.2e-06	27.8	0.2	1.6	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
TniB	PF05621.11	gi|298676128|ref|YP_003727877.1|	-	8.2e-06	25.4	0.0	1.5e-05	24.5	0.0	1.4	1	0	0	1	1	1	1	Bacterial	TniB	protein
DUF815	PF05673.13	gi|298676128|ref|YP_003727877.1|	-	1.2e-05	24.6	0.0	2.4e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
NACHT	PF05729.12	gi|298676128|ref|YP_003727877.1|	-	0.00026	21.0	0.0	0.00041	20.3	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
AAA_32	PF13654.6	gi|298676128|ref|YP_003727877.1|	-	0.0022	16.9	0.3	0.41	9.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|298676128|ref|YP_003727877.1|	-	0.003	17.1	0.0	0.0088	15.6	0.0	1.8	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
RNA_helicase	PF00910.22	gi|298676128|ref|YP_003727877.1|	-	0.0043	17.4	0.2	0.019	15.3	0.2	2.2	1	1	0	1	1	1	1	RNA	helicase
Kinesin	PF00225.23	gi|298676128|ref|YP_003727877.1|	-	0.006	15.6	0.0	0.036	13.0	0.0	2.1	2	0	0	2	2	2	1	Kinesin	motor	domain
AAA_assoc_2	PF16193.5	gi|298676128|ref|YP_003727877.1|	-	0.0061	16.9	0.0	0.017	15.5	0.0	1.7	1	0	0	1	1	1	1	AAA	C-terminal	domain
ResIII	PF04851.15	gi|298676128|ref|YP_003727877.1|	-	0.0069	16.4	0.2	0.048	13.7	0.0	2.3	2	1	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
Sigma54_activat	PF00158.26	gi|298676128|ref|YP_003727877.1|	-	0.0077	15.9	0.0	0.02	14.6	0.0	1.7	1	0	0	1	1	1	1	Sigma-54	interaction	domain
PIF1	PF05970.14	gi|298676128|ref|YP_003727877.1|	-	0.0088	15.3	0.0	0.02	14.1	0.0	1.7	1	1	1	2	2	2	1	PIF1-like	helicase
AAA_5	PF07728.14	gi|298676128|ref|YP_003727877.1|	-	0.013	15.5	0.1	0.67	10.0	0.0	2.7	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DUF2075	PF09848.9	gi|298676128|ref|YP_003727877.1|	-	0.019	14.2	0.0	0.023	13.9	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Zeta_toxin	PF06414.12	gi|298676128|ref|YP_003727877.1|	-	0.019	14.2	0.0	0.036	13.4	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_2	PF07724.14	gi|298676128|ref|YP_003727877.1|	-	0.061	13.4	0.0	0.17	12.0	0.0	1.7	2	0	0	2	2	1	0	AAA	domain	(Cdc48	subfamily)
TsaE	PF02367.17	gi|298676128|ref|YP_003727877.1|	-	0.063	13.3	0.0	0.12	12.4	0.0	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_19	PF13245.6	gi|298676128|ref|YP_003727877.1|	-	0.083	13.2	0.0	0.19	12.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|298676128|ref|YP_003727877.1|	-	0.09	12.5	0.0	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.6	gi|298676128|ref|YP_003727877.1|	-	0.097	12.4	0.0	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF772	PF05598.11	gi|298676129|ref|YP_003727878.1|	-	3.8e-21	74.9	0.1	8.1e-21	73.8	0.1	1.6	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
DDE_Tnp_1	PF01609.21	gi|298676129|ref|YP_003727878.1|	-	2.1e-12	47.1	1.8	5.4e-12	45.8	1.8	1.7	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.6	gi|298676129|ref|YP_003727878.1|	-	0.00017	21.3	0.1	0.00047	19.9	0.1	1.7	1	1	0	1	1	1	1	DDE	superfamily	endonuclease
DDE_Tnp_1_3	PF13612.6	gi|298676129|ref|YP_003727878.1|	-	0.0011	19.0	0.2	0.0033	17.4	0.1	1.8	2	0	0	2	2	2	1	Transposase	DDE	domain
SdrD_B	PF17210.3	gi|298676130|ref|YP_003727879.1|	-	1.5e-257	836.8	109.3	2.2e-37	127.7	4.0	8.2	8	0	0	8	8	8	8	SdrD	B-like	domain
CarboxypepD_reg	PF13620.6	gi|298676130|ref|YP_003727879.1|	-	1.4e-72	239.9	44.7	1.8e-09	37.8	1.2	8.7	8	0	0	8	8	8	8	Carboxypeptidase	regulatory-like	domain
bMG3	PF11974.8	gi|298676130|ref|YP_003727879.1|	-	1e-27	96.2	0.0	0.0034	17.4	0.0	8.3	8	0	0	8	8	8	7	Bacterial	alpha-2-macroglobulin	MG3	domain
CarbopepD_reg_2	PF13715.6	gi|298676130|ref|YP_003727879.1|	-	1.7e-25	88.8	40.0	0.0048	16.9	0.2	8.5	8	0	0	8	8	8	8	CarboxypepD_reg-like	domain
SpaA	PF17802.1	gi|298676130|ref|YP_003727879.1|	-	2e-16	60.1	69.5	1.6e-05	25.1	0.6	10.2	6	4	2	8	8	8	6	Prealbumin-like	fold	domain
UDP-g_GGTase	PF06427.11	gi|298676130|ref|YP_003727879.1|	-	1.4e-12	47.6	4.4	0.088	12.9	0.0	6.7	7	0	0	7	7	7	4	UDP-glucose:Glycoprotein	Glucosyltransferase
TTR-52	PF01060.23	gi|298676130|ref|YP_003727879.1|	-	1.4e-12	48.1	10.4	3.6	8.4	0.0	8.7	8	0	0	8	8	8	1	Transthyretin-like	family
AdenylateSensor	PF16579.5	gi|298676130|ref|YP_003727879.1|	-	2.7e-11	43.9	7.7	0.7	10.4	0.1	5.9	6	0	0	6	6	5	4	Adenylate	sensor	of	SNF1-like	protein	kinase
DUF2012	PF09430.10	gi|298676130|ref|YP_003727879.1|	-	3.5e-11	43.3	14.0	3.6	7.7	0.0	8.3	8	0	0	8	8	8	3	Protein	of	unknown	function	(DUF2012)
phage_tail_N	PF08400.10	gi|298676130|ref|YP_003727879.1|	-	3.6e-06	27.0	35.3	0.18	11.8	0.3	8.1	8	1	1	9	9	8	4	Prophage	tail	fibre	N-terminal
DUF2025	PF09634.10	gi|298676130|ref|YP_003727879.1|	-	0.00028	20.8	3.4	14	5.8	0.0	5.5	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF2025)
Dioxygenase_C	PF00775.21	gi|298676130|ref|YP_003727879.1|	-	0.00062	19.3	17.5	1	8.7	0.0	7.1	8	0	0	8	8	8	1	Dioxygenase
MetallophosN	PF16371.5	gi|298676130|ref|YP_003727879.1|	-	0.0025	18.0	40.8	0.098	12.9	0.1	9.3	8	2	1	9	9	9	1	N	terminal	of	Calcineurin-like	phosphoesterase
HupF_HypC	PF01455.18	gi|298676130|ref|YP_003727879.1|	-	0.0026	17.9	0.6	1.6e+02	2.6	0.0	5.8	6	0	0	6	6	6	0	HupF/HypC	family
Big_1	PF02369.16	gi|298676130|ref|YP_003727879.1|	-	0.0031	17.5	42.6	0.56	10.3	0.1	10.3	9	2	2	11	11	11	4	Bacterial	Ig-like	domain	(group	1)
DUF3244	PF11589.8	gi|298676130|ref|YP_003727879.1|	-	0.03	14.4	18.9	6.9	6.8	0.0	8.0	8	0	0	8	8	8	0	Domain	of	unknown	function	(DUF3244)
PEGA	PF08308.11	gi|298676130|ref|YP_003727879.1|	-	0.033	14.1	10.6	50	3.9	0.0	6.4	6	0	0	6	6	6	0	PEGA	domain
PLRV_ORF5	PF01690.17	gi|298676130|ref|YP_003727879.1|	-	0.035	12.9	38.2	0.57	8.9	1.2	5.9	6	0	0	6	6	6	0	Potato	leaf	roll	virus	readthrough	protein
CooC_C	PF15976.5	gi|298676130|ref|YP_003727879.1|	-	0.05	13.6	7.5	25	5.0	0.0	5.7	6	0	0	6	6	5	0	CS1-pili	formation	C-terminal
Glyco_hydro_42C	PF08533.10	gi|298676130|ref|YP_003727879.1|	-	0.084	12.6	0.4	5.6	6.8	0.1	3.1	2	0	0	2	2	2	0	Beta-galactosidase	C-terminal	domain
EMP24_GP25L	PF01105.24	gi|298676130|ref|YP_003727879.1|	-	0.66	9.9	28.2	7	6.6	0.1	7.2	4	2	3	8	8	8	0	emp24/gp25L/p24	family/GOLD
SdrD_B	PF17210.3	gi|298676131|ref|YP_003727880.1|	-	7.2e-131	428.8	48.6	5.9e-34	116.7	8.7	4.8	5	0	0	5	5	5	4	SdrD	B-like	domain
CarboxypepD_reg	PF13620.6	gi|298676131|ref|YP_003727880.1|	-	1.4e-33	115.0	20.7	1.5e-09	38.0	0.9	5.8	5	3	1	6	6	6	4	Carboxypeptidase	regulatory-like	domain
bMG3	PF11974.8	gi|298676131|ref|YP_003727880.1|	-	4.1e-13	49.3	0.0	0.062	13.3	0.0	4.5	4	0	0	4	4	4	4	Bacterial	alpha-2-macroglobulin	MG3	domain
CarbopepD_reg_2	PF13715.6	gi|298676131|ref|YP_003727880.1|	-	2.4e-12	46.7	9.2	0.0015	18.5	0.4	4.7	4	0	0	4	4	4	3	CarboxypepD_reg-like	domain
TTR-52	PF01060.23	gi|298676131|ref|YP_003727880.1|	-	2.6e-06	28.0	0.5	24	5.7	0.0	5.1	5	0	0	5	5	5	0	Transthyretin-like	family
UDP-g_GGTase	PF06427.11	gi|298676131|ref|YP_003727880.1|	-	4.7e-06	26.7	0.3	0.55	10.4	0.0	4.1	4	0	0	4	4	4	2	UDP-glucose:Glycoprotein	Glucosyltransferase
DUF1416	PF07210.12	gi|298676131|ref|YP_003727880.1|	-	2e-05	24.4	0.3	0.15	11.9	0.0	3.8	4	0	0	4	4	4	1	Protein	of	unknown	function	(DUF1416)
AdenylateSensor	PF16579.5	gi|298676131|ref|YP_003727880.1|	-	4.3e-05	24.0	0.1	0.18	12.3	0.0	2.7	2	0	0	2	2	2	2	Adenylate	sensor	of	SNF1-like	protein	kinase
CARDB	PF07705.11	gi|298676131|ref|YP_003727880.1|	-	0.00084	19.6	5.7	3.7	7.9	2.0	4.4	3	2	0	3	3	3	1	CARDB
Big_1	PF02369.16	gi|298676131|ref|YP_003727880.1|	-	0.0025	17.8	18.2	1.8	8.7	0.1	6.8	5	2	2	7	7	7	2	Bacterial	Ig-like	domain	(group	1)
phage_tail_N	PF08400.10	gi|298676131|ref|YP_003727880.1|	-	0.012	15.6	7.5	7.1	6.6	0.3	4.4	3	1	2	5	5	5	0	Prophage	tail	fibre	N-terminal
DUF11	PF01345.18	gi|298676131|ref|YP_003727880.1|	-	0.026	14.8	8.9	0.59	10.5	8.9	3.1	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF11
PLRV_ORF5	PF01690.17	gi|298676131|ref|YP_003727880.1|	-	0.03	13.1	13.8	0.41	9.3	0.8	3.3	3	1	0	3	3	3	0	Potato	leaf	roll	virus	readthrough	protein
SpaA	PF17802.1	gi|298676131|ref|YP_003727880.1|	-	0.079	13.3	38.8	0.54	10.6	6.6	6.7	4	3	0	4	4	4	0	Prealbumin-like	fold	domain
Tgi2PP	PF18250.1	gi|298676131|ref|YP_003727880.1|	-	0.094	13.0	3.0	46	4.3	0.1	4.2	3	0	0	3	3	3	0	Effector	immunity	protein	Tgi2PP
Dioxygenase_C	PF00775.21	gi|298676131|ref|YP_003727880.1|	-	0.16	11.4	0.9	3.5	7.0	0.0	3.1	3	0	0	3	3	3	0	Dioxygenase
PAS	PF00989.25	gi|298676132|ref|YP_003727881.1|	-	8.2e-37	125.7	0.0	2e-12	47.1	0.0	5.0	4	1	0	4	4	4	4	PAS	fold
PAS_9	PF13426.7	gi|298676132|ref|YP_003727881.1|	-	1.6e-36	124.7	0.2	5.6e-10	39.4	0.0	5.1	4	0	0	4	4	4	4	PAS	domain
HATPase_c	PF02518.26	gi|298676132|ref|YP_003727881.1|	-	1.3e-34	119.1	0.2	4.3e-34	117.4	0.1	2.0	2	0	0	2	2	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_4	PF08448.10	gi|298676132|ref|YP_003727881.1|	-	2.7e-33	114.5	0.0	2.5e-11	43.8	0.0	4.9	5	1	0	5	5	5	4	PAS	fold
PAS_8	PF13188.7	gi|298676132|ref|YP_003727881.1|	-	2.3e-28	97.7	0.6	2.6e-06	27.3	0.0	4.7	4	0	0	4	4	4	4	PAS	domain
HisKA	PF00512.25	gi|298676132|ref|YP_003727881.1|	-	3.2e-24	84.7	0.7	2.2e-22	78.9	0.2	2.9	2	0	0	2	2	2	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_3	PF08447.12	gi|298676132|ref|YP_003727881.1|	-	3.3e-17	62.5	0.1	4.5e-05	23.7	0.0	5.3	4	1	0	4	4	4	2	PAS	fold
PAS_12	PF18095.1	gi|298676132|ref|YP_003727881.1|	-	0.00029	20.5	0.0	1.1	8.8	0.0	4.0	4	0	0	4	4	4	1	UPF0242	C-terminal	PAS-like	domain
PAS_7	PF12860.7	gi|298676132|ref|YP_003727881.1|	-	0.00044	20.4	0.1	0.071	13.3	0.0	4.0	5	1	0	5	5	5	1	PAS	fold
GAF_2	PF13185.6	gi|298676132|ref|YP_003727881.1|	-	0.00056	20.2	0.0	0.0018	18.6	0.0	1.9	1	0	0	1	1	1	1	GAF	domain
HATPase_c_5	PF14501.6	gi|298676132|ref|YP_003727881.1|	-	0.0017	18.2	0.0	0.0049	16.7	0.0	1.8	1	0	0	1	1	1	1	GHKL	domain
HATPase_c_3	PF13589.6	gi|298676132|ref|YP_003727881.1|	-	0.006	16.4	0.0	0.013	15.3	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_10	PF13596.6	gi|298676132|ref|YP_003727881.1|	-	0.0087	16.6	0.1	0.92	10.1	0.0	3.7	3	0	0	3	3	3	1	PAS	domain
HATPase_c_2	PF13581.6	gi|298676132|ref|YP_003727881.1|	-	0.011	15.6	0.0	0.033	14.2	0.0	1.8	2	0	0	2	2	2	0	Histidine	kinase-like	ATPase	domain
Synaptobrevin	PF00957.21	gi|298676132|ref|YP_003727881.1|	-	3.4	7.5	5.6	3.3	7.5	0.1	2.8	2	0	0	2	2	2	0	Synaptobrevin
VWA	PF00092.28	gi|298676133|ref|YP_003727882.1|	-	1.7e-17	64.2	1.6	3.6e-17	63.2	1.6	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
DUF1194	PF06707.11	gi|298676133|ref|YP_003727882.1|	-	5.8e-17	61.6	0.0	1e-16	60.8	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1194)
VWA_2	PF13519.6	gi|298676133|ref|YP_003727882.1|	-	4.4e-09	37.0	0.5	7.6e-09	36.2	0.5	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
CARDB	PF07705.11	gi|298676133|ref|YP_003727882.1|	-	1.2e-05	25.5	27.4	0.033	14.4	1.4	4.3	4	0	0	4	4	4	3	CARDB
DUF11	PF01345.18	gi|298676133|ref|YP_003727882.1|	-	0.00022	21.5	14.8	0.23	11.8	1.0	4.2	3	1	0	3	3	3	3	Domain	of	unknown	function	DUF11
DUF2393	PF09624.10	gi|298676133|ref|YP_003727882.1|	-	0.0012	18.8	2.9	0.38	10.7	0.1	3.3	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF2393)
DUF1573	PF07610.11	gi|298676133|ref|YP_003727882.1|	-	0.003	17.5	8.9	0.22	11.6	0.8	3.8	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF1573)
Glucodextran_N	PF09137.11	gi|298676133|ref|YP_003727882.1|	-	0.0054	16.3	0.5	0.085	12.4	0.1	2.3	2	0	0	2	2	2	1	Glucodextranase,	domain	N
TRAP_beta	PF05753.14	gi|298676133|ref|YP_003727882.1|	-	0.0074	15.7	10.6	0.12	11.8	0.1	3.8	3	1	0	3	3	3	1	Translocon-associated	protein	beta	(TRAPB)
Integrin_alpha2	PF08441.12	gi|298676133|ref|YP_003727882.1|	-	0.053	12.4	0.5	1.6	7.5	0.1	2.4	2	0	0	2	2	2	0	Integrin	alpha
NPCBM_assoc	PF10633.9	gi|298676133|ref|YP_003727882.1|	-	0.19	12.0	5.7	26	5.1	0.1	4.6	5	0	0	5	5	5	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
Ecm33	PF12454.8	gi|298676133|ref|YP_003727882.1|	-	0.82	9.9	3.4	0.55	10.4	1.1	1.9	2	0	0	2	2	2	0	GPI-anchored	cell	wall	organization	protein
OrfB_IS605	PF01385.19	gi|298676134|ref|YP_003727883.1|	-	4.1e-22	78.7	0.2	1.6e-21	76.7	0.0	2.1	2	1	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298676134|ref|YP_003727883.1|	-	4.9e-10	39.2	0.3	1.8e-09	37.4	0.1	2.1	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
RuvX	PF03652.15	gi|298676134|ref|YP_003727883.1|	-	0.0046	17.3	0.0	0.011	16.1	0.0	1.6	1	0	0	1	1	1	1	Holliday	junction	resolvase
DUF919	PF06034.11	gi|298676134|ref|YP_003727883.1|	-	0.0055	16.5	0.4	0.015	15.1	0.4	1.7	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
Prenyltransf	PF01255.19	gi|298676135|ref|YP_003727884.1|	-	1.2e-69	234.3	0.1	1.5e-69	234.0	0.1	1.1	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
PD40	PF07676.12	gi|298676136|ref|YP_003727885.1|	-	1.3e-39	133.3	20.6	7.8e-10	38.4	0.3	8.7	9	0	0	9	9	9	7	WD40-like	Beta	Propeller	Repeat
CARDB	PF07705.11	gi|298676136|ref|YP_003727885.1|	-	6e-18	65.0	12.6	7.7e-17	61.4	1.6	3.5	3	0	0	3	3	3	2	CARDB
CarboxypepD_reg	PF13620.6	gi|298676136|ref|YP_003727885.1|	-	5.6e-11	42.6	0.6	2.1e-08	34.3	0.0	3.5	3	0	0	3	3	3	1	Carboxypeptidase	regulatory-like	domain
CarbopepD_reg_2	PF13715.6	gi|298676136|ref|YP_003727885.1|	-	5.9e-08	32.6	6.7	6.1e-07	29.3	0.3	3.4	3	0	0	3	3	3	1	CarboxypepD_reg-like	domain
DPPIV_N	PF00930.21	gi|298676136|ref|YP_003727885.1|	-	7.4e-08	31.5	23.0	0.017	13.9	0.3	6.8	2	1	4	6	6	6	4	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
Pectate_lyase22	PF14583.6	gi|298676136|ref|YP_003727885.1|	-	1.5e-06	27.2	4.4	0.03	13.0	0.0	3.9	1	1	3	4	4	4	3	Oligogalacturonate	lyase
SdrD_B	PF17210.3	gi|298676136|ref|YP_003727885.1|	-	5.1e-06	26.7	0.2	5.1e-06	26.7	0.2	4.5	4	1	1	5	5	5	1	SdrD	B-like	domain
DUF2012	PF09430.10	gi|298676136|ref|YP_003727885.1|	-	2e-05	24.7	0.0	8e-05	22.7	0.0	2.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2012)
SpaA	PF17802.1	gi|298676136|ref|YP_003727885.1|	-	0.42	11.0	4.2	0.77	10.1	0.5	3.2	2	0	0	2	2	2	0	Prealbumin-like	fold	domain
Glyco_hydro_30C	PF17189.4	gi|298676136|ref|YP_003727885.1|	-	9.2	6.6	14.0	1.5	9.1	0.5	5.1	4	2	1	5	5	5	0	Glycosyl	hydrolase	family	30	beta	sandwich	domain
TrmB	PF01978.19	gi|298676137|ref|YP_003727886.1|	-	4.9e-09	36.0	0.1	0.0051	16.7	0.0	3.1	3	0	0	3	3	3	2	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.22	gi|298676137|ref|YP_003727886.1|	-	1.1e-05	25.2	1.3	0.015	15.2	0.0	3.4	3	1	1	4	4	4	2	MarR	family
HTH_11	PF08279.12	gi|298676137|ref|YP_003727886.1|	-	0.00048	20.0	0.1	0.7	9.9	0.0	2.8	2	0	0	2	2	2	2	HTH	domain
Aph-1	PF06105.12	gi|298676137|ref|YP_003727886.1|	-	0.00064	19.2	0.0	0.0012	18.3	0.0	1.5	1	1	0	1	1	1	1	Aph-1	protein
HTH_36	PF13730.6	gi|298676137|ref|YP_003727886.1|	-	0.00069	19.5	0.1	0.4	10.7	0.0	2.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|298676137|ref|YP_003727886.1|	-	0.00075	19.3	0.0	0.082	12.8	0.0	2.5	2	0	0	2	2	2	1	MarR	family
HTH_5	PF01022.20	gi|298676137|ref|YP_003727886.1|	-	0.0072	16.2	0.8	1.3	9.0	0.0	2.7	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
DUF1441	PF07278.11	gi|298676137|ref|YP_003727886.1|	-	0.0076	16.2	0.2	0.017	15.0	0.1	1.6	2	0	0	2	2	1	1	Protein	of	unknown	function	(DUF1441)
RPA_C	PF08784.11	gi|298676137|ref|YP_003727886.1|	-	0.018	15.7	0.2	5.5	7.7	0.1	2.5	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
BPL_LplA_LipB	PF03099.19	gi|298676137|ref|YP_003727886.1|	-	0.022	14.7	0.0	0.045	13.7	0.0	1.5	1	0	0	1	1	1	0	Biotin/lipoate	A/B	protein	ligase	family
HTH_43	PF09904.9	gi|298676137|ref|YP_003727886.1|	-	0.035	14.0	0.0	0.14	12.2	0.0	1.8	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_27	PF13463.6	gi|298676137|ref|YP_003727886.1|	-	0.045	14.2	0.0	4.9	7.7	0.0	2.6	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.10	gi|298676137|ref|YP_003727886.1|	-	0.053	13.3	0.0	1.6	8.6	0.0	2.4	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
HTH_40	PF14493.6	gi|298676137|ref|YP_003727886.1|	-	0.065	13.7	0.1	13	6.3	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
Rrf2	PF02082.20	gi|298676137|ref|YP_003727886.1|	-	0.11	12.9	0.9	1.7	9.0	0.1	2.7	2	1	1	3	3	3	0	Transcriptional	regulator
HTH_Crp_2	PF13545.6	gi|298676137|ref|YP_003727886.1|	-	0.13	12.2	0.1	1.1	9.3	0.0	2.3	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_24	PF13412.6	gi|298676137|ref|YP_003727886.1|	-	0.18	11.4	3.1	16	5.1	0.0	3.8	3	1	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|298676138|ref|YP_003727887.1|	-	0.00011	22.1	0.1	0.0002	21.1	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
AhpC-TSA	PF00578.21	gi|298676138|ref|YP_003727887.1|	-	0.01	15.7	0.2	0.11	12.4	0.1	2.4	2	1	1	3	3	3	0	AhpC/TSA	family
PCI	PF01399.27	gi|298676138|ref|YP_003727887.1|	-	0.018	15.5	0.4	0.073	13.6	0.1	2.0	2	0	0	2	2	2	0	PCI	domain
PG_binding_2	PF08823.11	gi|298676138|ref|YP_003727887.1|	-	0.062	13.6	0.0	0.14	12.5	0.0	1.6	1	0	0	1	1	1	0	Putative	peptidoglycan	binding	domain
Dimerisation2	PF16864.5	gi|298676138|ref|YP_003727887.1|	-	0.11	12.5	0.0	0.29	11.2	0.0	1.7	1	0	0	1	1	1	0	Dimerisation	domain
NTP_transferase	PF00483.23	gi|298676139|ref|YP_003727888.1|	-	1.9e-47	162.0	0.0	2.8e-47	161.4	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.24	gi|298676139|ref|YP_003727888.1|	-	2.8e-15	55.4	28.7	1.3e-08	34.2	3.0	5.1	3	1	3	6	6	6	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.7	gi|298676139|ref|YP_003727888.1|	-	2.1e-12	47.7	0.0	2.9e-12	47.2	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.6	gi|298676139|ref|YP_003727888.1|	-	1.6e-06	27.7	16.8	0.00013	21.6	2.7	4.5	5	0	0	5	5	5	2	Hexapeptide	repeat	of	succinyl-transferase
IspD	PF01128.19	gi|298676139|ref|YP_003727888.1|	-	0.00012	21.9	0.0	0.00031	20.6	0.0	1.7	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
DUF4954	PF16314.5	gi|298676139|ref|YP_003727888.1|	-	0.0039	15.4	4.4	0.0081	14.3	4.4	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4954)
Fucokinase	PF07959.12	gi|298676139|ref|YP_003727888.1|	-	0.16	10.9	0.0	0.36	9.7	0.0	1.7	2	0	0	2	2	2	0	L-fucokinase
PGM_PMM_I	PF02878.16	gi|298676140|ref|YP_003727889.1|	-	7.2e-35	119.7	0.0	1.3e-34	118.9	0.0	1.3	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|298676140|ref|YP_003727889.1|	-	1.8e-28	99.1	0.1	4.2e-28	98.0	0.1	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|298676140|ref|YP_003727889.1|	-	4.1e-20	72.1	0.0	7.6e-20	71.2	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|298676140|ref|YP_003727889.1|	-	5.2e-12	45.8	0.0	1.2e-11	44.6	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
CinA_KH	PF18146.1	gi|298676140|ref|YP_003727889.1|	-	0.045	13.9	0.1	7.8	6.7	0.0	3.0	2	0	0	2	2	2	0	Damage-inducible	protein	CinA	KH	domain
DUF2957	PF11170.8	gi|298676140|ref|YP_003727889.1|	-	0.1	11.4	0.0	0.17	10.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2957)
SIS	PF01380.22	gi|298676141|ref|YP_003727890.1|	-	2.5e-60	202.0	3.7	2.8e-30	104.8	0.1	3.6	4	0	0	4	4	4	2	SIS	domain
GATase_6	PF13522.6	gi|298676141|ref|YP_003727890.1|	-	6.4e-22	78.2	0.0	1.2e-21	77.3	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|298676141|ref|YP_003727890.1|	-	1.2e-15	57.6	0.0	3.2e-15	56.1	0.0	1.8	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
SIS_2	PF13580.6	gi|298676141|ref|YP_003727890.1|	-	0.00079	19.4	0.1	0.072	13.1	0.0	2.6	2	0	0	2	2	2	1	SIS	domain
GATase_4	PF13230.6	gi|298676141|ref|YP_003727890.1|	-	0.0057	15.6	0.0	0.0095	14.9	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
DUF5124	PF17160.4	gi|298676141|ref|YP_003727890.1|	-	0.1	13.4	0.0	0.26	12.1	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5124)
NTP_transferase	PF00483.23	gi|298676142|ref|YP_003727891.1|	-	5.3e-45	153.9	0.2	8.2e-45	153.3	0.2	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.24	gi|298676142|ref|YP_003727891.1|	-	1.6e-22	78.3	20.6	2.3e-08	33.4	0.3	4.7	3	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.7	gi|298676142|ref|YP_003727891.1|	-	2.6e-15	57.1	0.0	3.7e-15	56.7	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.6	gi|298676142|ref|YP_003727891.1|	-	5.4e-09	35.6	21.0	4.7e-07	29.4	0.7	4.8	4	0	0	4	4	4	3	Hexapeptide	repeat	of	succinyl-transferase
IspD	PF01128.19	gi|298676142|ref|YP_003727891.1|	-	8.2e-06	25.7	0.1	2e-05	24.5	0.1	1.7	1	1	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Glycos_transf_2	PF00535.26	gi|298676142|ref|YP_003727891.1|	-	1.6e-05	24.8	0.1	2.7e-05	24.0	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
CTP_transf_3	PF02348.19	gi|298676142|ref|YP_003727891.1|	-	0.00015	21.8	0.9	0.00026	21.0	0.9	1.3	1	0	0	1	1	1	1	Cytidylyltransferase
Glyco_tranf_2_3	PF13641.6	gi|298676142|ref|YP_003727891.1|	-	0.0011	19.0	0.1	0.0021	18.0	0.1	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
DapH_N	PF08503.10	gi|298676142|ref|YP_003727891.1|	-	0.075	13.3	1.0	0.5	10.6	0.1	2.9	3	0	0	3	3	3	0	Tetrahydrodipicolinate	succinyltransferase	N-terminal
OrfB_Zn_ribbon	PF07282.11	gi|298676143|ref|YP_003727892.1|	-	7.1e-25	86.7	3.4	1.4e-24	85.7	1.0	2.5	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|298676143|ref|YP_003727892.1|	-	6.4e-10	39.3	1.6	6.4e-10	39.3	1.6	1.7	2	0	0	2	2	2	1	Probable	transposase
HypA	PF01155.19	gi|298676143|ref|YP_003727892.1|	-	0.058	13.4	0.1	0.14	12.2	0.1	1.6	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
UPF0547	PF10571.9	gi|298676143|ref|YP_003727892.1|	-	0.13	12.4	1.6	0.88	9.7	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DNA_RNApol_7kD	PF03604.13	gi|298676143|ref|YP_003727892.1|	-	0.88	9.3	6.7	3.4	7.4	6.7	2.0	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn_Tnp_IS1595	PF12760.7	gi|298676143|ref|YP_003727892.1|	-	1	9.4	4.8	2.7	8.1	4.8	1.7	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF2387	PF09526.10	gi|298676143|ref|YP_003727892.1|	-	1.8	8.8	5.8	13	6.0	1.9	3.0	2	1	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Rubredoxin_2	PF18073.1	gi|298676143|ref|YP_003727892.1|	-	2.2	8.1	4.5	21	4.9	0.4	2.4	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
DUF2207	PF09972.9	gi|298676144|ref|YP_003727893.1|	-	0.0099	14.7	0.4	0.013	14.3	0.4	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
DsbD_2	PF13386.6	gi|298676144|ref|YP_003727893.1|	-	0.013	15.5	0.3	0.014	15.3	0.3	1.0	1	0	0	1	1	1	0	Cytochrome	C	biogenesis	protein	transmembrane	region
TraQ	PF09679.10	gi|298676144|ref|YP_003727893.1|	-	0.11	12.4	0.4	0.15	12.0	0.4	1.2	1	0	0	1	1	1	0	Type-F	conjugative	transfer	system	pilin	chaperone	(TraQ)
DUF3188	PF11384.8	gi|298676144|ref|YP_003727893.1|	-	7.4	6.4	6.8	61	3.4	6.5	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3188)
Epimerase	PF01370.21	gi|298676145|ref|YP_003727894.1|	-	1.2e-56	191.9	0.0	1.5e-56	191.6	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|298676145|ref|YP_003727894.1|	-	3.1e-49	168.2	0.1	7.8e-49	166.8	0.1	1.6	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Polysacc_synt_2	PF02719.15	gi|298676145|ref|YP_003727894.1|	-	1.7e-22	79.9	0.6	4.7e-21	75.2	0.6	2.6	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
3Beta_HSD	PF01073.19	gi|298676145|ref|YP_003727894.1|	-	1.2e-21	77.0	0.0	1.7e-21	76.5	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|298676145|ref|YP_003727894.1|	-	1.7e-11	43.8	0.0	2.2e-11	43.4	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|298676145|ref|YP_003727894.1|	-	6.9e-09	35.3	0.0	2e-05	23.9	0.0	2.4	2	1	0	2	2	2	2	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|298676145|ref|YP_003727894.1|	-	4e-06	26.8	0.0	4.6e-05	23.4	0.0	2.4	1	1	1	2	2	2	1	NAD(P)H-binding
adh_short	PF00106.25	gi|298676145|ref|YP_003727894.1|	-	0.0003	20.3	0.0	0.0028	17.2	0.0	2.3	1	1	1	2	2	2	1	short	chain	dehydrogenase
NmrA	PF05368.13	gi|298676145|ref|YP_003727894.1|	-	0.00031	20.4	0.2	0.00084	19.0	0.0	1.8	2	0	0	2	2	2	1	NmrA-like	family
3HCDH_N	PF02737.18	gi|298676145|ref|YP_003727894.1|	-	0.0042	17.0	0.0	0.0085	16.0	0.0	1.6	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|298676145|ref|YP_003727894.1|	-	0.08	13.5	0.0	0.27	11.8	0.0	1.9	2	0	0	2	2	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
KR	PF08659.10	gi|298676145|ref|YP_003727894.1|	-	0.098	12.6	0.0	1	9.2	0.0	2.3	2	0	0	2	2	2	0	KR	domain
Glycos_transf_2	PF00535.26	gi|298676146|ref|YP_003727895.1|	-	4.6e-24	85.1	0.2	7.8e-24	84.4	0.2	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|298676146|ref|YP_003727895.1|	-	8.1e-05	22.6	0.1	0.00012	22.1	0.1	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|298676146|ref|YP_003727895.1|	-	0.0041	17.6	0.0	0.011	16.2	0.0	1.8	1	1	1	2	2	2	1	Glycosyl	transferase	family	2
DUF373	PF04123.13	gi|298676146|ref|YP_003727895.1|	-	3.6	7.0	6.1	1	8.7	0.8	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF373)
Glycos_transf_2	PF00535.26	gi|298676147|ref|YP_003727896.1|	-	6.1e-27	94.5	0.1	9.3e-27	93.9	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|298676147|ref|YP_003727896.1|	-	4.6e-16	59.4	0.0	6.8e-16	58.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|298676147|ref|YP_003727896.1|	-	8.5e-12	45.1	2.6	7.3e-11	42.0	2.6	2.0	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|298676147|ref|YP_003727896.1|	-	2.5e-09	37.3	0.1	3.8e-09	36.8	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_4	PF13704.6	gi|298676147|ref|YP_003727896.1|	-	4.2e-05	24.0	0.3	0.00097	19.6	0.0	2.4	2	1	0	2	2	2	1	Glycosyl	transferase	family	2
Anp1	PF03452.14	gi|298676147|ref|YP_003727896.1|	-	0.029	13.8	0.1	0.054	12.9	0.0	1.4	2	0	0	2	2	2	0	Anp1
DUF2207	PF09972.9	gi|298676147|ref|YP_003727896.1|	-	0.32	9.7	3.2	0.43	9.3	3.2	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
AMP-binding	PF00501.28	gi|298676148|ref|YP_003727897.1|	-	0.0015	17.2	0.0	0.0021	16.8	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme
RNaseH_like	PF04308.12	gi|298676148|ref|YP_003727897.1|	-	0.025	14.5	0.1	0.051	13.5	0.1	1.5	1	0	0	1	1	1	0	Ribonuclease	H-like
Glycos_transf_1	PF00534.20	gi|298676149|ref|YP_003727898.1|	-	1.4e-33	115.9	0.6	2.5e-33	115.0	0.6	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|298676149|ref|YP_003727898.1|	-	6.4e-29	101.1	0.0	1.9e-28	99.6	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|298676149|ref|YP_003727898.1|	-	8.1e-10	39.0	0.1	1.7e-09	37.9	0.1	1.6	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|298676149|ref|YP_003727898.1|	-	9.9e-08	32.3	0.0	2.2e-07	31.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|298676149|ref|YP_003727898.1|	-	0.0022	18.5	0.0	0.0032	17.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glycos_transf_1	PF00534.20	gi|298676150|ref|YP_003727899.1|	-	1.3e-36	125.7	0.2	2.8e-35	121.4	0.2	2.4	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|298676150|ref|YP_003727899.1|	-	3.6e-24	85.7	0.0	6.4e-24	84.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|298676150|ref|YP_003727899.1|	-	2.2e-12	47.3	0.0	3.2e-12	46.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|298676150|ref|YP_003727899.1|	-	0.0013	19.1	0.0	0.0051	17.2	0.0	2.0	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
DUF4649	PF15507.6	gi|298676150|ref|YP_003727899.1|	-	0.02	14.9	0.1	0.052	13.5	0.1	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4649)
DUF1359	PF07097.11	gi|298676150|ref|YP_003727899.1|	-	0.038	14.2	0.6	0.14	12.4	0.6	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1359)
Glyco_trans_4_4	PF13579.6	gi|298676150|ref|YP_003727899.1|	-	0.12	12.8	0.0	0.17	12.3	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
Tmemb_9	PF05434.11	gi|298676151|ref|YP_003727900.1|	-	9.9	6.1	5.8	0.9	9.4	0.3	2.1	2	0	0	2	2	2	0	TMEM9
Glycos_transf_2	PF00535.26	gi|298676152|ref|YP_003727901.1|	-	1.5e-41	142.0	0.1	2.4e-41	141.4	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|298676152|ref|YP_003727901.1|	-	1.2e-19	71.1	0.0	1.9e-19	70.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|298676152|ref|YP_003727901.1|	-	2.6e-19	69.8	2.8	3.4e-19	69.4	2.8	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|298676152|ref|YP_003727901.1|	-	0.014	15.8	0.1	0.035	14.6	0.1	1.7	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
TPR_2	PF07719.17	gi|298676152|ref|YP_003727901.1|	-	0.039	14.1	0.0	0.082	13.1	0.0	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
NTP_transferase	PF00483.23	gi|298676152|ref|YP_003727901.1|	-	0.04	13.5	0.0	0.063	12.8	0.0	1.2	1	0	0	1	1	1	0	Nucleotidyl	transferase
TPR_1	PF00515.28	gi|298676152|ref|YP_003727901.1|	-	0.041	13.7	0.0	0.094	12.6	0.0	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Peptidase_S24	PF00717.23	gi|298676152|ref|YP_003727901.1|	-	0.088	12.8	0.1	0.23	11.4	0.1	1.8	1	1	0	1	1	1	0	Peptidase	S24-like
Glycos_transf_1	PF00534.20	gi|298676153|ref|YP_003727902.1|	-	1.7e-40	138.4	0.0	3.6e-40	137.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|298676153|ref|YP_003727902.1|	-	2.7e-30	105.5	0.0	4.4e-30	104.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|298676153|ref|YP_003727902.1|	-	2.2e-15	57.0	0.0	1.8e-13	50.8	0.0	2.8	2	1	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.6	gi|298676153|ref|YP_003727902.1|	-	4.9e-10	39.6	1.0	2.2e-07	31.0	1.0	2.5	1	1	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_1_2	PF13524.6	gi|298676153|ref|YP_003727902.1|	-	1.2e-06	28.8	0.0	3.1e-06	27.5	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|298676153|ref|YP_003727902.1|	-	0.0026	18.2	0.0	0.04	14.4	0.0	2.5	2	1	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glyco_transf_5	PF08323.11	gi|298676153|ref|YP_003727902.1|	-	0.051	13.2	0.1	0.1	12.3	0.1	1.5	1	1	0	1	1	1	0	Starch	synthase	catalytic	domain
Trp_syntA	PF00290.20	gi|298676153|ref|YP_003727902.1|	-	0.085	11.7	0.0	0.18	10.6	0.0	1.5	2	0	0	2	2	2	0	Tryptophan	synthase	alpha	chain
Polysacc_synt_3	PF13440.6	gi|298676154|ref|YP_003727903.1|	-	1.5e-19	70.3	17.4	1.5e-19	70.3	17.4	2.3	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|298676154|ref|YP_003727903.1|	-	2.1e-18	66.7	26.8	2.1e-18	66.7	26.8	3.6	3	1	0	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt	PF01943.17	gi|298676154|ref|YP_003727903.1|	-	2.5e-15	56.6	28.8	2.5e-15	56.6	28.8	2.5	1	1	2	3	3	3	1	Polysaccharide	biosynthesis	protein
MurJ	PF03023.14	gi|298676154|ref|YP_003727903.1|	-	7.3e-09	34.7	43.2	7.3e-09	34.7	43.2	2.9	1	1	1	2	2	2	1	Lipid	II	flippase	MurJ
MatE	PF01554.18	gi|298676154|ref|YP_003727903.1|	-	1.8e-08	34.2	2.1	1.8e-08	34.2	2.1	4.5	3	2	1	4	4	4	2	MatE
Sulfotransfer_3	PF13469.6	gi|298676155|ref|YP_003727904.1|	-	6.1e-10	39.8	0.0	3.6e-08	34.1	0.0	2.8	1	1	0	1	1	1	1	Sulfotransferase	family
Proteasom_PSMB	PF10508.9	gi|298676155|ref|YP_003727904.1|	-	0.02	13.4	0.0	0.029	12.9	0.0	1.1	1	0	0	1	1	1	0	Proteasome	non-ATPase	26S	subunit
NTP_transferase	PF00483.23	gi|298676156|ref|YP_003727905.1|	-	8.7e-43	146.7	0.0	9.8e-43	146.5	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|298676156|ref|YP_003727905.1|	-	4.3e-15	56.4	0.0	5.6e-15	56.1	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|298676156|ref|YP_003727905.1|	-	9.9e-08	32.0	0.1	5.8e-07	29.5	0.1	2.1	1	1	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Glycos_transf_2	PF00535.26	gi|298676156|ref|YP_003727905.1|	-	0.0037	17.1	0.2	0.0062	16.4	0.2	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
DUF2408	PF10303.9	gi|298676157|ref|YP_003727906.1|	-	0.018	15.6	0.0	0.069	13.7	0.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
OrfB_IS605	PF01385.19	gi|298676158|ref|YP_003727907.1|	-	8.4e-22	77.6	0.0	1.7e-21	76.6	0.0	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298676158|ref|YP_003727907.1|	-	8e-12	44.9	0.0	1.7e-11	43.9	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Glyco_hydro_97	PF10566.9	gi|298676158|ref|YP_003727907.1|	-	0.0001	21.7	0.1	0.00018	20.9	0.1	1.4	1	0	0	1	1	1	1	Glycoside	hydrolase	97
EAP30	PF04157.16	gi|298676158|ref|YP_003727907.1|	-	0.067	12.5	0.0	0.11	11.7	0.0	1.4	1	0	0	1	1	1	0	EAP30/Vps36	family
RuvX	PF03652.15	gi|298676158|ref|YP_003727907.1|	-	0.15	12.4	0.0	0.3	11.5	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	resolvase
HEPN_Swt1	PF18731.1	gi|298676158|ref|YP_003727907.1|	-	0.16	12.4	1.7	0.23	11.8	0.7	1.8	2	0	0	2	2	2	0	Swt1-like	HEPN
Mrr_cat	PF04471.12	gi|298676159|ref|YP_003727908.1|	-	8.9e-27	93.4	0.1	6.4e-25	87.4	0.2	2.4	2	0	0	2	2	2	1	Restriction	endonuclease
Mrr_cat_2	PF13156.6	gi|298676159|ref|YP_003727908.1|	-	1.1e-06	28.6	0.3	1.1e-06	28.6	0.3	2.0	3	0	0	3	3	3	1	Restriction	endonuclease
CARD	PF00619.21	gi|298676159|ref|YP_003727908.1|	-	0.00015	21.7	0.8	0.5	10.4	0.1	3.5	2	1	1	3	3	3	1	Caspase	recruitment	domain
FAD_binding_1	PF00667.20	gi|298676159|ref|YP_003727908.1|	-	0.0049	16.5	0.8	0.0093	15.6	0.4	1.7	1	1	1	2	2	2	1	FAD	binding	domain
Ferritin	PF00210.24	gi|298676159|ref|YP_003727908.1|	-	0.17	11.8	3.5	0.47	10.4	1.0	2.6	1	1	0	2	2	2	0	Ferritin-like	domain
HEAT_PBS	PF03130.16	gi|298676159|ref|YP_003727908.1|	-	0.2	12.4	0.1	63	4.7	0.0	3.2	3	0	0	3	3	3	0	PBS	lyase	HEAT-like	repeat
Mrr_cat	PF04471.12	gi|298676160|ref|YP_003727909.1|	-	1.9e-23	82.7	0.2	3.7e-23	81.7	0.2	1.5	1	0	0	1	1	1	1	Restriction	endonuclease
Mrr_cat_2	PF13156.6	gi|298676160|ref|YP_003727909.1|	-	5.6e-06	26.3	0.4	1.2e-05	25.2	0.2	1.7	1	1	0	1	1	1	1	Restriction	endonuclease
BTB	PF00651.31	gi|298676160|ref|YP_003727909.1|	-	0.019	15.2	1.3	0.48	10.7	0.1	2.9	2	1	0	2	2	2	0	BTB/POZ	domain
HECT	PF00632.25	gi|298676160|ref|YP_003727909.1|	-	0.081	12.4	1.1	0.11	11.9	1.1	1.3	1	0	0	1	1	1	0	HECT-domain	(ubiquitin-transferase)
PemK_toxin	PF02452.17	gi|298676161|ref|YP_003727910.1|	-	3.8e-11	43.3	0.0	4.2e-11	43.2	0.0	1.0	1	0	0	1	1	1	1	PemK-like,	MazF-like	toxin	of	type	II	toxin-antitoxin	system
FliW	PF02623.15	gi|298676161|ref|YP_003727910.1|	-	0.046	13.6	0.0	0.053	13.4	0.0	1.2	1	0	0	1	1	1	0	FliW	protein
MazE_antitoxin	PF04014.18	gi|298676162|ref|YP_003727911.1|	-	4.4e-09	36.0	0.1	6e-09	35.6	0.1	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
PrlF_antitoxin	PF15937.5	gi|298676162|ref|YP_003727911.1|	-	0.0038	17.6	0.1	0.0055	17.1	0.1	1.5	1	1	0	1	1	1	1	prlF	antitoxin	for	toxin	YhaV_toxin
MraZ	PF02381.18	gi|298676162|ref|YP_003727911.1|	-	0.091	12.8	0.0	0.12	12.4	0.0	1.3	1	0	0	1	1	1	0	MraZ	protein,	putative	antitoxin-like
Phage_T4_gp36	PF03903.13	gi|298676162|ref|YP_003727911.1|	-	0.2	11.6	0.0	0.21	11.5	0.0	1.1	1	0	0	1	1	1	0	Phage	T4	tail	fibre
S-layer	PF07752.11	gi|298676163|ref|YP_003727912.1|	-	2.5e-154	511.8	32.1	5.1e-78	261.7	13.5	3.1	2	0	0	2	2	2	2	S-layer	protein
Peptidase_S8	PF00082.22	gi|298676163|ref|YP_003727912.1|	-	6.8e-48	163.4	8.4	6.8e-48	163.4	8.4	3.7	2	1	0	2	2	2	1	Subtilase	family
Big_2	PF02368.18	gi|298676163|ref|YP_003727912.1|	-	7.8e-08	32.1	2.6	7.8e-08	32.1	2.6	5.7	5	0	0	5	5	5	1	Bacterial	Ig-like	domain	(group	2)
FlgD_ig	PF13860.6	gi|298676163|ref|YP_003727912.1|	-	0.00021	21.1	0.1	0.00021	21.1	0.1	6.4	7	0	0	7	7	7	1	FlgD	Ig-like	domain
DUF2271	PF10029.9	gi|298676163|ref|YP_003727912.1|	-	0.00052	19.7	0.6	0.024	14.3	0.1	3.3	3	0	0	3	3	3	1	Predicted	periplasmic	protein	(DUF2271)
DUF4625	PF15418.6	gi|298676163|ref|YP_003727912.1|	-	0.0074	16.5	20.4	0.35	11.1	0.6	6.7	5	1	1	6	6	6	2	Domain	of	unknown	function	(DUF4625)
DUF4179	PF13786.6	gi|298676163|ref|YP_003727912.1|	-	0.058	13.9	3.1	0.55	10.7	0.1	3.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4179)
Peptidase_S49_N	PF08496.10	gi|298676163|ref|YP_003727912.1|	-	0.31	11.1	2.2	0.66	10.0	2.2	1.4	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
RGI_lyase	PF18370.1	gi|298676163|ref|YP_003727912.1|	-	2.4	8.5	6.9	8.3	6.8	0.0	5.0	4	0	0	4	4	4	0	Rhamnogalacturonan	I	lyases	beta-sheet	domain
KxDL	PF10241.9	gi|298676165|ref|YP_003727914.1|	-	0.086	13.1	0.8	0.21	11.9	0.8	1.7	1	0	0	1	1	1	0	Uncharacterized	conserved	protein
TaqI_C	PF12950.7	gi|298676166|ref|YP_003727915.1|	-	0.053	13.6	0.2	0.15	12.1	0.2	1.7	1	0	0	1	1	1	0	TaqI-like	C-terminal	specificity	domain
Tubulin_2	PF13809.6	gi|298676167|ref|YP_003727916.1|	-	3.1e-09	36.5	0.0	3.1e-09	36.5	0.0	2.4	2	1	0	2	2	2	1	Tubulin	like
Tubulin	PF00091.25	gi|298676167|ref|YP_003727916.1|	-	4.4e-07	30.3	0.0	4.4e-07	30.3	0.0	4.1	4	0	0	4	4	4	1	Tubulin/FtsZ	family,	GTPase	domain
DUF1563	PF07599.11	gi|298676167|ref|YP_003727916.1|	-	0.024	14.7	0.9	0.23	11.6	0.2	3.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1563)
Arch_flagellin	PF01917.16	gi|298676168|ref|YP_003727917.1|	-	1.7e-31	109.6	7.0	1.7e-31	109.6	7.0	2.1	1	1	1	2	2	2	1	Archaebacterial	flagellin
VanW	PF04294.13	gi|298676168|ref|YP_003727917.1|	-	0.034	13.8	0.1	0.11	12.2	0.1	1.7	1	1	0	1	1	1	0	VanW	like	protein
Clr5	PF14420.6	gi|298676169|ref|YP_003727918.1|	-	0.045	14.0	0.2	0.062	13.5	0.2	1.2	1	0	0	1	1	1	0	Clr5	domain
SF1-HH	PF16275.5	gi|298676169|ref|YP_003727918.1|	-	0.14	12.5	0.0	0.16	12.3	0.0	1.1	1	0	0	1	1	1	0	Splicing	factor	1	helix-hairpin	domain
TraT	PF05818.12	gi|298676170|ref|YP_003727919.1|	-	0.016	14.9	0.1	0.018	14.8	0.1	1.0	1	0	0	1	1	1	0	Enterobacterial	TraT	complement	resistance	protein
AHJR-like	PF18743.1	gi|298676170|ref|YP_003727919.1|	-	0.049	13.2	0.1	0.056	13.0	0.1	1.2	1	0	0	1	1	1	0	REase_AHJR-like
OrfB_IS605	PF01385.19	gi|298676171|ref|YP_003727920.1|	-	8.4e-26	90.6	0.8	2.2e-25	89.2	0.0	2.0	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298676171|ref|YP_003727920.1|	-	8.9e-12	44.8	0.3	2.4e-11	43.4	0.1	1.9	2	1	0	2	2	2	1	Putative	transposase	DNA-binding	domain
RuvX	PF03652.15	gi|298676171|ref|YP_003727920.1|	-	0.018	15.5	0.0	0.037	14.4	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	resolvase
MTES_1575	PF18741.1	gi|298676172|ref|YP_003727921.1|	-	3e-36	123.5	0.2	1.1e-35	121.6	0.1	2.1	2	0	0	2	2	2	1	REase_MTES_1575
AAA_12	PF13087.6	gi|298676172|ref|YP_003727921.1|	-	1.8e-14	53.8	3.5	3e-13	49.9	1.7	2.8	2	1	0	2	2	2	1	AAA	domain
AAA_11	PF13086.6	gi|298676172|ref|YP_003727921.1|	-	1.5e-09	38.1	0.1	3.1e-09	37.0	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
DUF559	PF04480.12	gi|298676172|ref|YP_003727921.1|	-	0.00027	20.7	0.0	0.00079	19.3	0.0	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF559)
RAP	PF08373.10	gi|298676172|ref|YP_003727921.1|	-	0.0014	18.6	0.5	0.0053	16.8	0.1	2.3	3	0	0	3	3	3	1	RAP	domain
AAA_19	PF13245.6	gi|298676172|ref|YP_003727921.1|	-	0.0021	18.4	0.0	0.0043	17.4	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|298676172|ref|YP_003727921.1|	-	0.004	16.9	0.0	0.009	15.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
UvrD-helicase	PF00580.21	gi|298676172|ref|YP_003727921.1|	-	0.0091	15.6	1.5	0.021	14.4	1.5	1.7	1	1	0	1	1	1	1	UvrD/REP	helicase	N-terminal	domain
Viral_helicase1	PF01443.18	gi|298676172|ref|YP_003727921.1|	-	0.016	15.0	0.0	0.035	13.9	0.0	1.5	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
PAS_3	PF08447.12	gi|298676173|ref|YP_003727922.1|	-	1.2e-45	153.7	0.9	1e-20	73.8	0.3	3.7	4	0	0	4	4	4	3	PAS	fold
PAS_9	PF13426.7	gi|298676173|ref|YP_003727922.1|	-	3.9e-32	110.6	6.2	4e-13	49.5	0.0	4.1	4	0	0	4	4	4	4	PAS	domain
PAS	PF00989.25	gi|298676173|ref|YP_003727922.1|	-	2.7e-25	88.6	0.1	4e-15	55.8	0.0	4.1	4	0	0	4	4	4	3	PAS	fold
PAS_4	PF08448.10	gi|298676173|ref|YP_003727922.1|	-	4e-25	88.2	0.0	2.1e-10	40.8	0.0	4.2	4	0	0	4	4	4	4	PAS	fold
PAS_11	PF14598.6	gi|298676173|ref|YP_003727922.1|	-	7.1e-09	35.8	0.0	5.3e-06	26.5	0.0	2.7	2	1	0	2	2	2	2	PAS	domain
PAS_8	PF13188.7	gi|298676173|ref|YP_003727922.1|	-	4.4e-06	26.6	0.0	0.73	9.9	0.0	4.3	4	0	0	4	4	4	1	PAS	domain
PAS_7	PF12860.7	gi|298676173|ref|YP_003727922.1|	-	0.018	15.2	0.5	2	8.6	0.0	3.9	4	1	0	4	4	4	0	PAS	fold
HisKA_2	PF07568.12	gi|298676174|ref|YP_003727923.1|	-	9.2e-30	102.6	5.1	9.2e-30	102.6	5.1	2.4	2	1	0	2	2	2	1	Histidine	kinase
HATPase_c	PF02518.26	gi|298676174|ref|YP_003727923.1|	-	1.7e-07	31.7	0.0	1.7e-06	28.5	0.0	2.4	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HWE_HK	PF07536.14	gi|298676174|ref|YP_003727923.1|	-	4.6e-07	30.4	1.6	1.5e-06	28.8	0.2	2.3	2	0	0	2	2	2	1	HWE	histidine	kinase
HATPase_c_2	PF13581.6	gi|298676174|ref|YP_003727923.1|	-	0.00049	20.0	0.0	0.0011	18.9	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
Apolipoprotein	PF01442.18	gi|298676174|ref|YP_003727923.1|	-	0.011	15.6	2.9	0.013	15.4	2.9	1.1	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
Gluconate_2-dh3	PF13618.6	gi|298676174|ref|YP_003727923.1|	-	0.011	15.9	1.3	0.018	15.3	1.3	1.4	1	1	0	1	1	1	0	Gluconate	2-dehydrogenase	subunit	3
PIN_8	PF18476.1	gi|298676174|ref|YP_003727923.1|	-	0.031	14.1	5.7	0.043	13.7	5.7	1.2	1	0	0	1	1	1	0	PIN	like	domain
SPOB_a	PF14689.6	gi|298676174|ref|YP_003727923.1|	-	0.08	12.7	8.1	0.12	12.1	1.6	3.4	3	1	1	4	4	4	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
Succ_DH_flav_C	PF02910.20	gi|298676174|ref|YP_003727923.1|	-	0.091	12.8	1.9	0.16	12.0	1.9	1.3	1	0	0	1	1	1	0	Fumarate	reductase	flavoprotein	C-term
Fib_alpha	PF08702.10	gi|298676174|ref|YP_003727923.1|	-	0.23	11.6	6.5	0.36	11.0	6.5	1.4	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DUF572	PF04502.13	gi|298676174|ref|YP_003727923.1|	-	0.37	10.4	4.3	0.45	10.1	4.3	1.1	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF572)
Spc29	PF17082.5	gi|298676174|ref|YP_003727923.1|	-	2.7	7.8	9.9	4.6	7.0	0.3	2.1	1	1	1	2	2	2	0	Spindle	Pole	Component	29
YdjM	PF04307.14	gi|298676176|ref|YP_003727925.1|	-	5.2e-15	55.2	3.8	6.5e-15	54.9	3.8	1.1	1	0	0	1	1	1	1	LexA-binding,	inner	membrane-associated	putative	hydrolase
Lar_restr_allev	PF14354.6	gi|298676177|ref|YP_003727926.1|	-	0.0012	19.2	0.5	0.0014	19.0	0.5	1.1	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.12	gi|298676177|ref|YP_003727926.1|	-	0.0019	17.7	0.8	0.0027	17.2	0.8	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
FlhC	PF05280.11	gi|298676177|ref|YP_003727926.1|	-	0.0048	16.6	0.3	0.0054	16.5	0.3	1.0	1	0	0	1	1	1	1	Flagellar	transcriptional	activator	(FlhC)
DNA_ligase_ZBD	PF03119.16	gi|298676177|ref|YP_003727926.1|	-	0.029	14.4	0.9	0.12	12.4	0.9	2.0	1	1	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Opiods_neuropep	PF01160.18	gi|298676177|ref|YP_003727926.1|	-	0.038	14.1	0.5	0.043	13.9	0.5	1.1	1	0	0	1	1	1	0	Vertebrate	endogenous	opioids	neuropeptide
DUF4428	PF14471.6	gi|298676177|ref|YP_003727926.1|	-	0.049	13.6	1.3	0.074	13.0	1.3	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
DUF1272	PF06906.11	gi|298676177|ref|YP_003727926.1|	-	0.072	13.2	2.9	0.88	9.7	0.1	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1272)
zinc_ribbon_9	PF14369.6	gi|298676177|ref|YP_003727926.1|	-	0.16	12.3	0.6	0.16	12.3	0.6	1.5	1	1	0	1	1	1	0	zinc-ribbon
VATC	PF18716.1	gi|298676177|ref|YP_003727926.1|	-	0.21	11.5	2.6	2.8	7.8	2.6	2.0	1	1	0	1	1	1	0	Vms1-associating	treble	clef	domain
DUF1616	PF07760.11	gi|298676178|ref|YP_003727927.1|	-	3.3e-113	377.9	0.2	3.8e-113	377.7	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
MFS_1	PF07690.16	gi|298676178|ref|YP_003727927.1|	-	2.3e-06	26.8	1.8	3.5e-06	26.2	1.8	1.2	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
DUF4064	PF13273.6	gi|298676178|ref|YP_003727927.1|	-	0.044	14.1	0.1	0.044	14.1	0.1	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF872	PF05915.12	gi|298676178|ref|YP_003727927.1|	-	0.22	11.7	0.9	26	5.0	0.0	2.4	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
CPBP	PF02517.16	gi|298676179|ref|YP_003727928.1|	-	2.3e-17	63.2	5.4	2.3e-17	63.2	5.4	2.4	2	1	0	2	2	2	1	CPBP	intramembrane	metalloprotease
DUF1419	PF07215.11	gi|298676179|ref|YP_003727928.1|	-	0.15	12.2	0.4	2.2	8.4	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1419)
Y_Y_Y	PF07495.13	gi|298676181|ref|YP_003727930.1|	-	4.7e-06	26.5	1.0	0.00031	20.7	0.0	3.0	3	0	0	3	3	3	1	Y_Y_Y	domain
DUF669	PF05037.13	gi|298676181|ref|YP_003727930.1|	-	0.028	14.6	0.2	12	6.0	0.0	3.2	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF669)
BsuPI	PF12690.7	gi|298676181|ref|YP_003727930.1|	-	0.043	13.8	1.1	1.7	8.7	0.7	3.3	4	0	0	4	4	4	0	Intracellular	proteinase	inhibitor
Big_3_5	PF16640.5	gi|298676181|ref|YP_003727930.1|	-	0.067	13.4	2.0	9	6.6	0.6	3.6	3	1	0	3	3	3	0	Bacterial	Ig-like	domain	(group	3)
Tox-ODYAM1	PF15642.6	gi|298676181|ref|YP_003727930.1|	-	0.076	12.0	0.8	0.11	11.4	0.8	1.2	1	0	0	1	1	1	0	Toxin	in	Odyssella	and	Amoebophilus
UPF0228	PF05727.11	gi|298676183|ref|YP_003727932.1|	-	1e-26	93.2	9.9	1.2e-26	92.9	9.4	1.4	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0228)
DUF3221	PF11518.8	gi|298676183|ref|YP_003727932.1|	-	0.26	11.7	2.9	0.52	10.7	0.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3221)
PGF-CTERM	PF18204.1	gi|298676185|ref|YP_003727934.1|	-	0.041	13.9	4.3	0.069	13.1	4.3	1.3	1	0	0	1	1	1	0	PGF-CTERM	motif
TraA	PF05513.11	gi|298676185|ref|YP_003727934.1|	-	0.042	14.2	0.1	2	8.8	0.0	2.5	2	0	0	2	2	2	0	TraA
Pilin_N	PF07790.11	gi|298676186|ref|YP_003727935.1|	-	0.00014	22.7	0.1	0.00041	21.2	0.0	1.9	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
UPF0228	PF05727.11	gi|298676188|ref|YP_003727937.1|	-	6.3e-41	139.1	4.1	6.3e-41	139.1	4.1	2.0	1	1	1	2	2	2	2	Uncharacterised	protein	family	(UPF0228)
DUF3149	PF11346.8	gi|298676189|ref|YP_003727938.1|	-	0.012	15.2	2.3	0.012	15.2	2.3	2.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3149)
E1-E2_ATPase	PF00122.20	gi|298676189|ref|YP_003727938.1|	-	0.6	9.6	1.7	0.67	9.5	1.7	1.1	1	0	0	1	1	1	0	E1-E2	ATPase
DUF2207	PF09972.9	gi|298676189|ref|YP_003727938.1|	-	1.3	7.7	6.1	1.5	7.5	6.1	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DHHC	PF01529.20	gi|298676189|ref|YP_003727938.1|	-	3.1	7.9	5.6	3.8	7.6	5.6	1.0	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
MMADHC	PF10229.9	gi|298676190|ref|YP_003727939.1|	-	0.083	12.6	0.0	0.65	9.7	0.0	1.9	2	0	0	2	2	2	0	Methylmalonic	aciduria	and	homocystinuria	type	D	protein
GRP	PF07172.11	gi|298676191|ref|YP_003727940.1|	-	0.084	13.6	0.4	0.092	13.4	0.4	1.0	1	0	0	1	1	1	0	Glycine	rich	protein	family
NosD	PF05048.13	gi|298676192|ref|YP_003727941.1|	-	2.4e-44	151.4	123.7	2e-19	69.8	35.8	3.1	1	1	2	3	3	3	3	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|298676192|ref|YP_003727941.1|	-	4.7e-36	124.0	133.2	1.2e-17	64.2	39.8	3.4	2	1	2	4	4	4	3	Right	handed	beta	helix	region
FixG_C	PF11614.8	gi|298676194|ref|YP_003727943.1|	-	3.9e-10	40.0	49.9	0.0035	17.5	1.9	7.7	6	1	1	7	7	7	5	IG-like	fold	at	C-terminal	of	FixG,	putative	oxidoreductase
PGF-CTERM	PF18204.1	gi|298676194|ref|YP_003727943.1|	-	0.00011	22.0	0.4	0.00017	21.4	0.4	1.3	1	0	0	1	1	1	1	PGF-CTERM	motif
DUF11	PF01345.18	gi|298676194|ref|YP_003727943.1|	-	0.0015	18.7	57.0	0.011	16.0	1.6	6.9	6	1	1	7	7	7	4	Domain	of	unknown	function	DUF11
Ail_Lom	PF06316.11	gi|298676194|ref|YP_003727943.1|	-	0.0021	17.8	2.5	0.92	9.2	0.4	3.1	2	1	0	2	2	2	2	Enterobacterial	Ail/Lom	protein
Fn3-like	PF14310.6	gi|298676194|ref|YP_003727943.1|	-	0.057	13.5	0.0	19	5.4	0.0	4.3	3	0	0	3	3	3	0	Fibronectin	type	III-like	domain
Pentapeptide_4	PF13599.6	gi|298676194|ref|YP_003727943.1|	-	0.088	13.0	0.1	0.38	10.9	0.1	2.1	1	0	0	1	1	1	0	Pentapeptide	repeats	(9	copies)
BsuPI	PF12690.7	gi|298676194|ref|YP_003727943.1|	-	1.2	9.2	26.1	3.2	7.8	0.8	8.2	10	1	0	10	10	10	0	Intracellular	proteinase	inhibitor
ASH	PF15780.5	gi|298676194|ref|YP_003727943.1|	-	2.4	8.4	33.7	0.76	10.0	0.8	6.8	6	1	1	7	7	7	0	Abnormal	spindle-like	microcephaly-assoc'd,	ASPM-SPD-2-Hydin
Pilin_N	PF07790.11	gi|298676195|ref|YP_003727944.1|	-	3e-24	85.7	1.5	3e-24	85.7	1.5	1.9	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
Response_reg	PF00072.24	gi|298676196|ref|YP_003727945.1|	-	4.4e-28	97.7	0.1	4.9e-28	97.5	0.1	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Ras	PF00071.22	gi|298676197|ref|YP_003727946.1|	-	0.071	12.7	0.1	0.12	11.9	0.1	1.4	1	0	0	1	1	1	0	Ras	family
Imm6	PF14434.6	gi|298676197|ref|YP_003727946.1|	-	0.2	11.6	6.8	0.26	11.2	1.1	2.8	2	1	1	3	3	3	0	Immunity	protein	Imm6
RAMP4	PF06624.12	gi|298676198|ref|YP_003727947.1|	-	0.016	15.3	0.3	0.034	14.2	0.3	1.5	1	0	0	1	1	1	0	Ribosome	associated	membrane	protein	RAMP4
GatB_Yqey	PF02637.18	gi|298676198|ref|YP_003727947.1|	-	0.018	15.0	1.1	0.025	14.5	0.5	1.6	2	0	0	2	2	2	0	GatB	domain
SNF2_assoc	PF08455.10	gi|298676199|ref|YP_003727948.1|	-	0.00075	18.6	0.9	0.00086	18.4	0.9	1.1	1	0	0	1	1	1	1	Bacterial	SNF2	helicase	associated
GatB_Yqey	PF02637.18	gi|298676199|ref|YP_003727948.1|	-	0.02	14.7	0.7	0.024	14.5	0.7	1.1	1	0	0	1	1	1	0	GatB	domain
FRP	PF18032.1	gi|298676199|ref|YP_003727948.1|	-	0.057	14.0	0.3	0.11	13.2	0.1	1.6	2	0	0	2	2	2	0	Photoprotection	regulator	fluorescence	recovery	protein
EamA	PF00892.20	gi|298676202|ref|YP_003727951.1|	-	4.6e-13	49.5	51.1	8.1e-06	26.0	19.6	3.1	2	1	0	2	2	2	2	EamA-like	transporter	family
Rer1	PF03248.13	gi|298676204|ref|YP_003727953.1|	-	0.084	12.6	2.4	0.1	12.4	2.4	1.0	1	0	0	1	1	1	0	Rer1	family
DDE_3	PF13358.6	gi|298676205|ref|YP_003727954.1|	-	1.5e-21	76.7	0.1	2e-21	76.3	0.1	1.2	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
DDE_1	PF03184.19	gi|298676205|ref|YP_003727954.1|	-	9.7e-05	22.1	0.1	0.00012	21.8	0.1	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
rve	PF00665.26	gi|298676205|ref|YP_003727954.1|	-	0.00031	20.9	0.0	0.00046	20.4	0.0	1.2	1	0	0	1	1	1	1	Integrase	core	domain
HTH_32	PF13565.6	gi|298676206|ref|YP_003727955.1|	-	5.6e-11	42.9	0.1	1.1e-10	42.0	0.1	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_23	PF13384.6	gi|298676206|ref|YP_003727955.1|	-	3.8e-08	32.9	0.2	1.2e-07	31.3	0.0	1.9	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_33	PF13592.6	gi|298676206|ref|YP_003727955.1|	-	1.7e-07	30.7	0.3	1.4e-06	27.8	0.1	2.4	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_28	PF13518.6	gi|298676206|ref|YP_003727955.1|	-	7.7e-07	29.1	0.0	1.7e-06	28.0	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_29	PF13551.6	gi|298676206|ref|YP_003727955.1|	-	7.4e-06	25.9	0.0	1.6e-05	24.9	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
DUF559	PF04480.12	gi|298676206|ref|YP_003727955.1|	-	0.0021	17.9	0.3	0.006	16.4	0.1	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF559)
HTH_Tnp_IS630	PF01710.16	gi|298676206|ref|YP_003727955.1|	-	0.0025	17.8	0.4	0.0043	17.1	0.2	1.5	1	1	0	1	1	1	1	Transposase
Tau95	PF09734.9	gi|298676206|ref|YP_003727955.1|	-	0.03	15.1	0.3	0.057	14.2	0.2	1.5	1	1	0	1	1	1	0	RNA	polymerase	III	transcription	factor	(TF)IIIC	subunit	HTH	domain
LZ_Tnp_IS481	PF13011.6	gi|298676206|ref|YP_003727955.1|	-	0.15	12.7	0.0	0.23	12.0	0.0	1.4	1	0	0	1	1	1	0	leucine-zipper	of	insertion	element	IS481
U3_assoc_6	PF08640.11	gi|298676206|ref|YP_003727955.1|	-	0.42	10.7	4.4	0.43	10.7	0.3	2.7	3	0	0	3	3	3	0	U3	small	nucleolar	RNA-associated	protein	6
MetOD1	PF18546.1	gi|298676207|ref|YP_003727956.1|	-	1.7e-40	138.5	1.6	2.9e-40	137.8	1.6	1.4	1	0	0	1	1	1	1	Metanogen	output	domain	1
PAS_9	PF13426.7	gi|298676207|ref|YP_003727956.1|	-	3.9e-23	81.7	1.4	4.2e-11	43.0	0.1	2.8	3	0	0	3	3	3	2	PAS	domain
PAS_8	PF13188.7	gi|298676207|ref|YP_003727956.1|	-	9.5e-17	60.6	0.2	9.4e-09	35.1	0.0	2.5	2	0	0	2	2	2	2	PAS	domain
PAS_4	PF08448.10	gi|298676207|ref|YP_003727956.1|	-	5.9e-16	58.7	0.0	1.7e-07	31.5	0.0	2.2	2	0	0	2	2	2	2	PAS	fold
PAS	PF00989.25	gi|298676207|ref|YP_003727956.1|	-	3.9e-13	49.4	0.1	1.2e-05	25.3	0.0	2.7	2	0	0	2	2	2	2	PAS	fold
PAS_3	PF08447.12	gi|298676207|ref|YP_003727956.1|	-	4.8e-07	30.0	0.0	0.0082	16.4	0.0	2.5	2	0	0	2	2	2	2	PAS	fold
DUF3877	PF12993.7	gi|298676207|ref|YP_003727956.1|	-	0.0034	17.3	0.1	0.011	15.6	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function,	E.	rectale	Gene	description	(DUF3877)
ATC_hydrolase	PF14196.6	gi|298676207|ref|YP_003727956.1|	-	0.21	12.4	1.3	0.73	10.6	1.3	1.9	1	1	0	1	1	1	0	L-2-amino-thiazoline-4-carboxylic	acid	hydrolase
Glug	PF07581.12	gi|298676209|ref|YP_003727958.1|	-	5.3e-48	158.3	187.2	0.00053	20.2	2.5	25.7	26	0	0	26	26	26	20	The	GLUG	motif
NosD	PF05048.13	gi|298676209|ref|YP_003727958.1|	-	1.5e-31	109.6	94.6	2e-24	86.2	34.8	6.2	4	1	2	6	6	6	2	Periplasmic	copper-binding	protein	(NosD)
Trypan_PARP	PF05887.11	gi|298676209|ref|YP_003727958.1|	-	0.014	15.4	2.6	0.04	13.9	2.6	1.8	1	0	0	1	1	1	0	Procyclic	acidic	repetitive	protein	(PARP)
DUF5094	PF17015.5	gi|298676210|ref|YP_003727959.1|	-	0.13	12.4	9.0	0.15	12.1	9.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5094)
ThiS	PF02597.20	gi|298676212|ref|YP_003727961.1|	-	0.12	13.0	0.0	0.21	12.2	0.0	1.5	1	0	0	1	1	1	0	ThiS	family
Pilin_N	PF07790.11	gi|298676212|ref|YP_003727961.1|	-	0.15	13.0	0.4	0.42	11.6	0.4	1.9	1	1	0	1	1	1	0	Archaeal	Type	IV	pilin,	N-terminal
ParE_toxin	PF05016.15	gi|298676214|ref|YP_003727963.1|	-	2.7e-06	27.9	0.5	4.1e-06	27.3	0.5	1.3	1	1	0	1	1	1	1	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
Gp49	PF05973.14	gi|298676214|ref|YP_003727963.1|	-	0.00015	21.8	0.0	0.00018	21.6	0.0	1.1	1	0	0	1	1	1	1	Phage	derived	protein	Gp49-like	(DUF891)
ParE-like_toxin	PF15781.5	gi|298676214|ref|YP_003727963.1|	-	0.00017	21.5	0.5	0.00026	20.9	0.5	1.3	1	1	0	1	1	1	1	ParE-like	toxin	of	type	II	bacterial	toxin-antitoxin	system
DUF4364	PF14277.6	gi|298676214|ref|YP_003727963.1|	-	0.0034	17.2	0.4	0.0041	16.9	0.4	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
Gag_p24	PF00607.20	gi|298676215|ref|YP_003727964.1|	-	0.00061	19.7	0.0	0.00073	19.5	0.0	1.1	1	0	0	1	1	1	1	gag	gene	protein	p24	(core	nucleocapsid	protein)
zf-C2H2_4	PF13894.6	gi|298676217|ref|YP_003727966.1|	-	9.1e-08	32.3	34.4	0.0031	18.2	1.6	5.9	6	0	0	6	6	6	3	C2H2-type	zinc	finger
zf-Di19	PF05605.12	gi|298676217|ref|YP_003727966.1|	-	3.9e-07	30.2	19.8	0.08	13.3	0.1	4.0	2	1	0	3	3	3	3	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2H2_jaz	PF12171.8	gi|298676217|ref|YP_003727966.1|	-	8.3e-07	29.1	12.4	0.00033	20.9	2.5	4.6	5	1	0	5	5	3	2	Zinc-finger	double-stranded	RNA-binding
DZR	PF12773.7	gi|298676217|ref|YP_003727966.1|	-	0.00054	19.9	13.0	0.015	15.3	1.7	3.2	2	1	1	3	3	3	2	Double	zinc	ribbon
zf-C2H2	PF00096.26	gi|298676217|ref|YP_003727966.1|	-	0.0014	19.0	38.9	0.016	15.6	3.3	5.7	6	0	0	6	6	6	3	Zinc	finger,	C2H2	type
zf-C2HC_2	PF13913.6	gi|298676217|ref|YP_003727966.1|	-	0.0061	16.4	4.8	0.084	12.8	0.4	4.4	5	0	0	5	5	4	2	zinc-finger	of	a	C2HC-type
zf-C2H2_2	PF12756.7	gi|298676217|ref|YP_003727966.1|	-	0.008	16.5	27.1	0.1	12.9	6.0	3.6	1	1	2	3	3	3	3	C2H2	type	zinc-finger	(2	copies)
zf-met	PF12874.7	gi|298676217|ref|YP_003727966.1|	-	0.013	15.9	18.9	0.22	12.0	1.8	4.1	4	0	0	4	4	3	0	Zinc-finger	of	C2H2	type
PyrI_C	PF02748.15	gi|298676217|ref|YP_003727966.1|	-	0.018	14.9	12.9	0.098	12.6	0.4	3.3	3	1	0	3	3	3	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
NAD_binding_4	PF07993.12	gi|298676217|ref|YP_003727966.1|	-	0.019	14.1	0.3	1.8	7.6	0.0	2.0	1	1	1	2	2	2	0	Male	sterility	protein
HSP33	PF01430.19	gi|298676217|ref|YP_003727966.1|	-	0.029	13.8	1.8	3.8	6.8	0.1	2.3	2	0	0	2	2	2	0	Hsp33	protein
NinD	PF17466.2	gi|298676217|ref|YP_003727966.1|	-	0.03	14.4	0.4	4.8	7.3	0.0	2.9	3	0	0	3	3	3	0	Family	of	unknown	function
zinc-ribbons_6	PF07191.12	gi|298676217|ref|YP_003727966.1|	-	0.056	13.4	14.1	1.4	8.9	0.9	3.8	3	1	1	4	4	4	0	zinc-ribbons
DUF4370	PF14290.6	gi|298676217|ref|YP_003727966.1|	-	0.085	12.7	0.4	0.12	12.2	0.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4370)
zf-CHCC	PF10276.9	gi|298676217|ref|YP_003727966.1|	-	0.096	12.8	13.4	1.5	9.0	0.1	4.3	5	0	0	5	5	5	0	Zinc-finger	domain
zf-RING_7	PF02591.15	gi|298676217|ref|YP_003727966.1|	-	0.1	12.8	7.3	6.6	7.0	0.0	4.1	4	0	0	4	4	4	0	C4-type	zinc	ribbon	domain
Sgf11	PF08209.11	gi|298676217|ref|YP_003727966.1|	-	0.12	12.0	11.7	3.4	7.3	0.2	3.7	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
T6PP_N	PF18572.1	gi|298676217|ref|YP_003727966.1|	-	0.4	10.5	3.7	0.88	9.4	0.2	2.2	1	1	1	2	2	2	0	Trehalose-6-phosphate	phosphatase	N-terminal	helical	bundle	domain
DUF629	PF04780.12	gi|298676217|ref|YP_003727966.1|	-	0.58	8.6	17.9	2.5	6.5	2.6	3.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF629)
GFA	PF04828.14	gi|298676217|ref|YP_003727966.1|	-	1	9.7	14.4	4.7	7.6	2.4	3.5	3	1	0	3	3	3	0	Glutathione-dependent	formaldehyde-activating	enzyme
CpXC	PF14353.6	gi|298676217|ref|YP_003727966.1|	-	1.3	9.1	13.6	0.85	9.7	0.4	3.7	2	2	1	3	3	3	0	CpXC	protein
zf-TFIIIC	PF12660.7	gi|298676217|ref|YP_003727966.1|	-	1.7	8.7	11.7	5.1	7.1	0.3	3.4	1	1	1	2	2	2	0	Putative	zinc-finger	of	transcription	factor	IIIC	complex
BolA	PF01722.18	gi|298676217|ref|YP_003727966.1|	-	3.1	8.1	10.0	27	5.1	1.9	3.1	1	1	1	2	2	2	0	BolA-like	protein
zf-AN1	PF01428.16	gi|298676217|ref|YP_003727966.1|	-	3.2	8.0	29.9	0.26	11.5	1.5	3.8	4	0	0	4	4	4	0	AN1-like	Zinc	finger
HNH	PF01844.23	gi|298676217|ref|YP_003727966.1|	-	9.4	6.5	24.4	1.5	9.0	0.4	4.8	5	0	0	5	5	5	0	HNH	endonuclease
DDE_3	PF13358.6	gi|298676218|ref|YP_003727967.1|	-	3.1e-32	111.3	0.1	4e-32	111.0	0.1	1.1	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
AviRa	PF11599.8	gi|298676218|ref|YP_003727967.1|	-	0.057	12.9	0.2	0.11	12.0	0.1	1.5	2	0	0	2	2	2	0	RRNA	methyltransferase	AviRa
SMC_ScpB	PF04079.16	gi|298676218|ref|YP_003727967.1|	-	0.1	12.2	0.0	0.17	11.5	0.0	1.5	1	0	0	1	1	1	0	Segregation	and	condensation	complex	subunit	ScpB
HTH_32	PF13565.6	gi|298676219|ref|YP_003727968.1|	-	1.2e-10	41.8	0.0	4.3e-10	40.1	0.0	1.8	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_29	PF13551.6	gi|298676219|ref|YP_003727968.1|	-	6.4e-10	38.9	0.0	1e-09	38.3	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|298676219|ref|YP_003727968.1|	-	4.7e-05	23.0	0.1	0.00016	21.3	0.0	1.9	2	0	0	2	2	2	1	Homeodomain-like	domain
Clathrin	PF00637.20	gi|298676219|ref|YP_003727968.1|	-	0.03	14.2	0.3	0.051	13.4	0.3	1.4	1	0	0	1	1	1	0	Region	in	Clathrin	and	VPS
ATG27	PF09451.10	gi|298676219|ref|YP_003727968.1|	-	0.17	11.7	1.4	3.4	7.5	0.1	2.0	1	1	1	2	2	2	0	Autophagy-related	protein	27
fn3	PF00041.21	gi|298676220|ref|YP_003727969.1|	-	5.2e-05	23.5	1.6	5.2e-05	23.5	1.6	3.3	3	0	0	3	3	3	1	Fibronectin	type	III	domain
YtkA	PF13115.6	gi|298676220|ref|YP_003727969.1|	-	2.2	8.9	7.2	1.2	9.8	0.2	4.1	4	0	0	4	4	4	0	YtkA-like
Gram_pos_anchor	PF00746.21	gi|298676221|ref|YP_003727970.1|	-	0.00058	19.7	0.1	0.0012	18.7	0.1	1.5	1	0	0	1	1	1	1	LPXTG	cell	wall	anchor	motif
MG4	PF17789.1	gi|298676221|ref|YP_003727970.1|	-	0.0018	18.4	1.3	1.6	8.9	0.2	2.8	2	0	0	2	2	2	2	Macroglobulin	domain	MG4
CarboxypepD_reg	PF13620.6	gi|298676221|ref|YP_003727970.1|	-	0.0064	16.7	1.7	0.013	15.8	0.2	2.3	2	0	0	2	2	2	1	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|298676221|ref|YP_003727970.1|	-	0.022	14.8	0.1	0.022	14.8	0.1	3.1	4	0	0	4	4	4	0	Bacterial	Ig-like	domain	(group	1)
Pollen_Ole_e_I	PF01190.17	gi|298676221|ref|YP_003727970.1|	-	0.023	15.0	0.6	0.088	13.2	0.0	2.2	2	0	0	2	2	2	0	Pollen	proteins	Ole	e	I	like
SEP	PF08059.13	gi|298676221|ref|YP_003727970.1|	-	0.026	15.1	2.2	0.12	12.9	0.7	2.5	2	1	0	2	2	2	0	SEP	domain
TTR-52	PF01060.23	gi|298676221|ref|YP_003727970.1|	-	0.21	12.3	3.4	0.65	10.7	0.1	2.9	3	0	0	3	3	3	0	Transthyretin-like	family
Glyco_hydro_108	PF05838.12	gi|298676221|ref|YP_003727970.1|	-	0.7	10.4	3.6	2	8.9	1.9	2.5	2	1	0	2	2	2	0	Glycosyl	hydrolase	108
Cupredoxin_1	PF13473.6	gi|298676221|ref|YP_003727970.1|	-	1.2	9.3	4.4	3.2	7.9	3.2	2.3	2	1	0	2	2	2	0	Cupredoxin-like	domain
Pilin_N	PF07790.11	gi|298676221|ref|YP_003727970.1|	-	7.8	7.5	5.9	6.4	7.8	0.1	3.1	2	1	0	2	2	2	0	Archaeal	Type	IV	pilin,	N-terminal
DUF4625	PF15418.6	gi|298676223|ref|YP_003727972.1|	-	0.0023	18.2	1.2	0.0023	18.2	1.2	11.5	7	2	5	12	12	12	2	Domain	of	unknown	function	(DUF4625)
Big_7	PF17957.1	gi|298676223|ref|YP_003727972.1|	-	0.0033	18.1	18.8	0.0046	17.7	9.0	18.0	16	4	3	19	19	19	5	Bacterial	Ig	domain
DUF1616	PF07760.11	gi|298676223|ref|YP_003727972.1|	-	0.0049	16.3	1.0	0.0049	16.3	1.0	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1616)
Y_Y_Y	PF07495.13	gi|298676223|ref|YP_003727972.1|	-	3.3	7.7	8.2	6.7	6.7	0.0	5.3	4	0	0	4	4	4	0	Y_Y_Y	domain
DUF5462	PF17547.2	gi|298676223|ref|YP_003727972.1|	-	4.9	6.5	7.4	4.7	6.6	0.1	3.9	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5462)
Big_3_4	PF13754.6	gi|298676223|ref|YP_003727972.1|	-	5.3	6.8	8.9	4.5	7.1	0.0	5.2	6	0	0	6	6	6	0	Domain	of	unknown	function
Spc7	PF08317.11	gi|298676224|ref|YP_003727973.1|	-	3.9e-06	26.0	74.7	0.013	14.4	24.1	3.9	2	2	2	4	4	4	4	Spc7	kinetochore	protein
AAA_13	PF13166.6	gi|298676224|ref|YP_003727973.1|	-	1.2e-05	24.2	73.8	8.7e-05	21.4	34.1	2.3	1	1	1	2	2	2	2	AAA	domain
AAA_23	PF13476.6	gi|298676224|ref|YP_003727973.1|	-	0.00049	20.7	100.6	0.0027	18.2	45.6	4.7	1	1	2	3	3	2	1	AAA	domain
OmpH	PF03938.14	gi|298676224|ref|YP_003727973.1|	-	0.015	15.6	76.1	0.23	11.8	12.9	4.4	2	2	2	4	4	4	0	Outer	membrane	protein	(OmpH-like)
Spore_III_AB	PF09548.10	gi|298676224|ref|YP_003727973.1|	-	0.02	15.0	0.9	0.02	15.0	0.9	4.7	3	2	1	4	4	4	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
ERM	PF00769.19	gi|298676224|ref|YP_003727973.1|	-	0.28	11.0	51.7	0.19	11.5	15.5	2.4	2	0	0	2	2	2	0	Ezrin/radixin/moesin	family
UPF0242	PF06785.11	gi|298676224|ref|YP_003727973.1|	-	0.4	10.8	84.2	1.1	9.3	13.5	4.5	2	2	2	4	4	4	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
T3SSipB	PF16535.5	gi|298676224|ref|YP_003727973.1|	-	0.43	11.0	41.9	0.14	12.7	8.9	4.9	1	1	4	5	5	5	0	Type	III	cell	invasion	protein	SipB
TMF_TATA_bd	PF12325.8	gi|298676224|ref|YP_003727973.1|	-	1.6	9.0	65.7	0.5	10.6	14.9	5.0	1	1	4	5	5	5	0	TATA	element	modulatory	factor	1	TATA	binding
Fez1	PF06818.15	gi|298676224|ref|YP_003727973.1|	-	1.6	9.1	64.9	0.35	11.3	24.0	3.9	2	2	2	4	4	4	0	Fez1
TACC_C	PF05010.14	gi|298676224|ref|YP_003727973.1|	-	2.6	7.8	70.5	0.027	14.3	31.3	3.5	2	2	0	2	2	2	0	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
HOOK	PF05622.12	gi|298676224|ref|YP_003727973.1|	-	2.9	5.9	76.1	0.68	8.0	36.0	2.1	1	1	0	2	2	2	0	HOOK	protein
FliJ	PF02050.16	gi|298676224|ref|YP_003727973.1|	-	3.8	7.8	50.7	0.049	13.9	4.9	5.1	2	2	2	4	4	4	0	Flagellar	FliJ	protein
Fmp27_WPPW	PF10359.9	gi|298676224|ref|YP_003727973.1|	-	4.1	6.1	68.3	0.16	10.8	11.9	4.2	1	1	3	4	4	4	0	RNA	pol	II	promoter	Fmp27	protein	domain
GAS	PF13851.6	gi|298676224|ref|YP_003727973.1|	-	4.3	6.6	84.1	0.69	9.2	23.2	3.9	2	2	1	3	3	3	0	Growth-arrest	specific	micro-tubule	binding
MHB	PF16525.5	gi|298676224|ref|YP_003727973.1|	-	4.5	7.6	7.0	1.6	9.0	0.5	3.3	3	0	0	3	3	3	0	Haemophore,	haem-binding
Laminin_II	PF06009.12	gi|298676224|ref|YP_003727973.1|	-	9.3	6.3	62.3	2.5	8.1	11.3	5.1	2	2	4	6	6	5	0	Laminin	Domain	II
LTXXQ	PF07813.12	gi|298676224|ref|YP_003727973.1|	-	9.7	7.0	10.2	1.2	9.9	1.2	3.2	2	2	1	3	3	3	0	LTXXQ	motif	family	protein
DUF4373	PF14297.6	gi|298676225|ref|YP_003727974.1|	-	0.024	15.4	0.6	0.22	12.3	0.0	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4373)
HTH_45	PF14947.6	gi|298676226|ref|YP_003727975.1|	-	2.7e-06	27.3	2.0	0.0012	18.8	0.1	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix
DUF2250	PF10007.9	gi|298676226|ref|YP_003727975.1|	-	0.0033	17.5	0.1	2.5	8.3	0.0	2.3	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_54	PF18607.1	gi|298676226|ref|YP_003727975.1|	-	0.01	15.9	0.1	0.73	9.9	0.1	2.2	1	1	1	2	2	2	0	ParA	helix	turn	helix	domain
DUF4835	PF16119.5	gi|298676226|ref|YP_003727975.1|	-	0.027	13.6	0.2	0.036	13.2	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4835)
OrfB_IS605	PF01385.19	gi|298676228|ref|YP_003727977.1|	-	2.3e-27	95.6	2.1	5.1e-27	94.5	2.1	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|298676228|ref|YP_003727977.1|	-	5.4e-24	83.9	0.4	1.1e-23	82.9	0.4	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|298676228|ref|YP_003727977.1|	-	1.9e-19	68.9	1.4	4e-19	67.8	1.4	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-piccolo	PF05715.13	gi|298676228|ref|YP_003727977.1|	-	0.0071	16.5	0.3	0.019	15.1	0.3	1.7	1	0	0	1	1	1	1	Piccolo	Zn-finger
LemA	PF04011.12	gi|298676228|ref|YP_003727977.1|	-	0.031	14.1	0.9	0.4	10.5	0.2	2.2	2	0	0	2	2	2	0	LemA	family
Phage_GP20	PF06810.11	gi|298676228|ref|YP_003727977.1|	-	0.036	13.9	6.7	0.21	11.4	1.3	2.7	3	0	0	3	3	3	0	Phage	minor	structural	protein	GP20
HypA	PF01155.19	gi|298676228|ref|YP_003727977.1|	-	0.37	10.8	1.8	1.3	9.1	0.8	2.2	2	1	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
MapZ_EC1	PF18041.1	gi|298676228|ref|YP_003727977.1|	-	0.59	10.4	8.1	0.22	11.8	2.0	2.4	2	0	0	2	2	2	0	MapZ	extracellular	domain	1
Big_3_3	PF13750.6	gi|298676229|ref|YP_003727978.1|	-	8.5e-05	22.3	37.7	0.00013	21.7	1.7	6.6	4	2	2	7	7	7	4	Bacterial	Ig-like	domain	(group	3)
DUF4625	PF15418.6	gi|298676229|ref|YP_003727978.1|	-	0.00058	20.1	31.0	0.093	13.0	0.8	7.0	4	1	4	8	8	8	4	Domain	of	unknown	function	(DUF4625)
Y_Y_Y	PF07495.13	gi|298676229|ref|YP_003727978.1|	-	0.22	11.5	9.1	0.41	10.6	0.3	4.6	3	0	0	3	3	3	0	Y_Y_Y	domain
Gram_pos_anchor	PF00746.21	gi|298676230|ref|YP_003727979.1|	-	0.0003	20.6	0.2	0.00065	19.6	0.2	1.6	1	0	0	1	1	1	1	LPXTG	cell	wall	anchor	motif
CarboxypepD_reg	PF13620.6	gi|298676230|ref|YP_003727979.1|	-	0.00086	19.5	0.8	0.00086	19.5	0.8	2.3	2	0	0	2	2	2	1	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|298676230|ref|YP_003727979.1|	-	0.0056	16.7	0.2	0.0056	16.7	0.2	3.2	4	0	0	4	4	4	1	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|298676230|ref|YP_003727979.1|	-	0.0091	16.1	1.6	1.9	8.7	0.2	2.8	2	0	0	2	2	2	2	Macroglobulin	domain	MG4
SEP	PF08059.13	gi|298676230|ref|YP_003727979.1|	-	0.047	14.3	2.0	0.25	11.9	0.6	2.5	2	1	0	2	2	2	0	SEP	domain
DUF617	PF04759.13	gi|298676230|ref|YP_003727979.1|	-	0.13	12.3	0.2	1.2	9.2	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF617
ABC2_membrane_3	PF12698.7	gi|298676230|ref|YP_003727979.1|	-	0.14	11.3	2.7	0.33	10.0	2.7	1.6	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
TTR-52	PF01060.23	gi|298676230|ref|YP_003727979.1|	-	0.74	10.6	3.7	1.6	9.4	0.2	2.8	3	0	0	3	3	3	0	Transthyretin-like	family
Glyco_hydro2_C5	PF18565.1	gi|298676230|ref|YP_003727979.1|	-	2.5	8.0	5.8	13	5.7	0.0	3.2	4	0	0	4	4	4	0	Glycoside	hydrolase	family	2	C-terminal	domain	5
Pilin_N	PF07790.11	gi|298676230|ref|YP_003727979.1|	-	4.5	8.3	6.3	2.2	9.3	0.3	3.0	2	1	1	3	3	3	0	Archaeal	Type	IV	pilin,	N-terminal
TrmB	PF01978.19	gi|298676231|ref|YP_003727980.1|	-	9.2e-06	25.5	0.0	1.5e-05	24.8	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|298676231|ref|YP_003727980.1|	-	3e-05	23.8	0.0	4.5e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|298676231|ref|YP_003727980.1|	-	4.2e-05	23.4	0.1	7.8e-05	22.5	0.0	1.5	1	1	0	1	1	1	1	MarR	family
SMC_ScpB	PF04079.16	gi|298676231|ref|YP_003727980.1|	-	0.00082	19.0	0.1	0.0012	18.5	0.1	1.2	1	0	0	1	1	1	1	Segregation	and	condensation	complex	subunit	ScpB
HTH_36	PF13730.6	gi|298676231|ref|YP_003727980.1|	-	0.0072	16.3	0.1	0.011	15.7	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF327	PF03885.13	gi|298676231|ref|YP_003727980.1|	-	0.016	15.2	0.1	0.02	14.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF327)
Phage_rep_O	PF04492.13	gi|298676231|ref|YP_003727980.1|	-	0.022	15.3	0.1	0.036	14.7	0.1	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	protein	O
HTH_37	PF13744.6	gi|298676231|ref|YP_003727980.1|	-	0.046	13.7	0.1	0.11	12.5	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF2582	PF10771.9	gi|298676231|ref|YP_003727980.1|	-	0.1	12.8	0.2	0.41	10.8	0.1	2.0	1	1	1	2	2	2	0	Winged	helix-turn-helix	domain	(DUF2582)
AAA_22	PF13401.6	gi|298676232|ref|YP_003727981.1|	-	1.4e-13	51.3	0.1	5.2e-13	49.4	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|298676232|ref|YP_003727981.1|	-	7.2e-06	26.5	0.3	0.00015	22.2	0.0	2.5	2	1	0	2	2	2	1	AAA	ATPase	domain
ATPase_2	PF01637.18	gi|298676232|ref|YP_003727981.1|	-	0.0011	18.9	0.8	0.015	15.2	0.5	2.7	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_19	PF13245.6	gi|298676232|ref|YP_003727981.1|	-	0.007	16.7	0.1	0.036	14.4	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|298676232|ref|YP_003727981.1|	-	0.01	16.3	0.6	0.025	15.0	0.1	1.9	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SNF2_N	PF00176.23	gi|298676232|ref|YP_003727981.1|	-	0.011	14.5	0.1	0.017	13.9	0.1	1.2	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
NB-ARC	PF00931.22	gi|298676232|ref|YP_003727981.1|	-	0.012	14.8	1.2	2.7	7.1	0.1	2.5	2	1	0	2	2	2	0	NB-ARC	domain
#
# Program:         hmmscan
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SCAN
# Query file:      /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanohalobium_evestigatum_Z_7303_uid49857/all.faa
# Target file:     /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanohalobium_evestigatum_Z_7303_uid49857/all.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanohalobium_evestigatum_Z_7303_uid49857/all.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanohalobium_evestigatum_Z_7303_uid49857/all.faa 
# Current dir:     /oak/stanford/groups/akundaje/marinovg/genomes
# Date:            Mon Mar 25 16:00:09 2019
# [ok]