# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Flavin_Reduct PF01613.18 gi|150398761|ref|YP_001322528.1| - 7.9e-25 87.7 0.0 9.5e-25 87.4 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain IGPD PF00475.18 gi|150398762|ref|YP_001322529.1| - 3.2e-55 186.4 0.2 3.9e-55 186.1 0.2 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase EamA PF00892.20 gi|150398763|ref|YP_001322530.1| - 2.8e-33 115.0 48.4 8e-18 64.9 22.6 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF2953 PF11167.8 gi|150398763|ref|YP_001322530.1| - 0.68 10.0 5.2 2 8.6 0.1 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF2953) DAP_epimerase PF01678.19 gi|150398764|ref|YP_001322531.1| - 3.7e-67 224.0 0.6 6.4e-33 113.5 0.1 2.0 2 0 0 2 2 2 2 Diaminopimelate epimerase YBD PF17725.1 gi|150398764|ref|YP_001322531.1| - 0.062 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 YAP binding domain PRC PF05239.16 gi|150398765|ref|YP_001322532.1| - 3e-13 49.6 0.6 3.5e-13 49.4 0.6 1.0 1 0 0 1 1 1 1 PRC-barrel domain DUF2171 PF09939.9 gi|150398765|ref|YP_001322532.1| - 0.012 15.8 0.0 0.019 15.2 0.0 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2171) NTP_transf_3 PF12804.7 gi|150398766|ref|YP_001322533.1| - 5e-10 40.0 0.0 7e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 gi|150398766|ref|YP_001322533.1| - 6.1e-09 35.8 0.1 1.1e-08 34.9 0.1 1.5 1 1 0 1 1 1 1 Nucleotidyl transferase CTP_transf_3 PF02348.19 gi|150398766|ref|YP_001322533.1| - 2e-06 27.9 0.9 7.1e-06 26.1 0.9 1.9 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.19 gi|150398766|ref|YP_001322533.1| - 1.2e-05 25.1 0.0 1.6e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PRMT5 PF05185.16 gi|150398766|ref|YP_001322533.1| - 0.034 14.0 0.1 0.054 13.4 0.1 1.3 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase PAC2 PF09754.9 gi|150398767|ref|YP_001322534.1| - 9.2e-39 133.6 0.0 1.1e-38 133.5 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Med4 PF10018.9 gi|150398767|ref|YP_001322534.1| - 0.028 14.1 0.1 0.044 13.5 0.1 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF473 PF04322.12 gi|150398768|ref|YP_001322535.1| - 8.5e-30 103.0 4.0 9.8e-30 102.8 4.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF473) Tautomerase PF01361.21 gi|150398769|ref|YP_001322536.1| - 7.4e-12 45.0 0.1 8.3e-12 44.9 0.1 1.1 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_2 PF14552.6 gi|150398769|ref|YP_001322536.1| - 0.0048 17.0 0.0 0.005 16.9 0.0 1.1 1 0 0 1 1 1 1 Tautomerase enzyme Peptidase_S9_N PF02897.15 gi|150398769|ref|YP_001322536.1| - 0.092 11.5 0.0 0.098 11.4 0.0 1.0 1 0 0 1 1 1 0 Prolyl oligopeptidase, N-terminal beta-propeller domain FMN_red PF03358.15 gi|150398770|ref|YP_001322537.1| - 6.9e-39 133.1 0.0 8.4e-39 132.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|150398770|ref|YP_001322537.1| - 6.2e-12 45.6 0.0 8.3e-12 45.2 0.0 1.3 1 1 0 1 1 1 1 Flavodoxin-like fold DUF2284 PF10050.9 gi|150398770|ref|YP_001322537.1| - 0.034 13.9 0.1 0.056 13.2 0.1 1.3 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Flavodoxin_5 PF12724.7 gi|150398770|ref|YP_001322537.1| - 0.099 12.9 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Flavodoxin domain SNARE_assoc PF09335.11 gi|150398772|ref|YP_001322539.1| - 8.2e-18 65.0 9.9 8.2e-18 65.0 9.9 1.4 2 0 0 2 2 2 1 SNARE associated Golgi protein CBS PF00571.28 gi|150398773|ref|YP_001322540.1| - 4e-23 81.6 1.5 5.4e-11 42.8 0.1 2.1 2 0 0 2 2 2 2 CBS domain DnaB PF00772.21 gi|150398773|ref|YP_001322540.1| - 0.011 15.8 0.0 0.016 15.3 0.0 1.5 1 1 0 1 1 1 0 DnaB-like helicase N terminal domain THF_DHG_CYH_C PF02882.19 gi|150398773|ref|YP_001322540.1| - 0.053 12.8 0.1 0.069 12.5 0.1 1.2 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TrmB PF01978.19 gi|150398774|ref|YP_001322541.1| - 1.8e-13 50.1 0.0 3.2e-13 49.3 0.0 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|150398774|ref|YP_001322541.1| - 0.00061 19.6 0.0 0.00097 19.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|150398774|ref|YP_001322541.1| - 0.0011 18.5 0.0 0.0018 17.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|150398774|ref|YP_001322541.1| - 0.016 15.0 0.0 0.023 14.5 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_38 PF13936.6 gi|150398774|ref|YP_001322541.1| - 0.016 14.9 0.0 0.034 13.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 gi|150398774|ref|YP_001322541.1| - 0.02 14.5 0.2 0.045 13.4 0.0 1.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Dimerisation2 PF16864.5 gi|150398774|ref|YP_001322541.1| - 0.021 14.8 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Dimerisation domain HTH_11 PF08279.12 gi|150398774|ref|YP_001322541.1| - 0.036 14.0 0.0 0.054 13.4 0.0 1.3 1 0 0 1 1 1 0 HTH domain HrcA_DNA-bdg PF03444.15 gi|150398774|ref|YP_001322541.1| - 0.052 13.2 0.0 0.081 12.6 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_27 PF13463.6 gi|150398774|ref|YP_001322541.1| - 0.07 13.6 0.0 0.17 12.4 0.0 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain ApoLp-III PF07464.11 gi|150398774|ref|YP_001322541.1| - 0.071 13.2 0.5 1.2 9.2 0.1 2.0 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) MarR PF01047.22 gi|150398774|ref|YP_001322541.1| - 0.086 12.8 0.1 0.24 11.4 0.0 1.8 2 0 0 2 2 2 0 MarR family HTH_Tnp_Tc3_1 PF11427.8 gi|150398774|ref|YP_001322541.1| - 0.086 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Tc3 transposase Fungal_trans PF04082.18 gi|150398774|ref|YP_001322541.1| - 0.14 11.2 0.1 0.16 11.0 0.1 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain Lactamase_B_2 PF12706.7 gi|150398775|ref|YP_001322542.1| - 2e-17 63.4 0.0 1.8e-16 60.2 0.0 1.9 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|150398775|ref|YP_001322542.1| - 1e-08 35.4 0.0 2.2e-08 34.4 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|150398775|ref|YP_001322542.1| - 1.2e-08 34.5 0.0 2.2e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 tRNase Z endonuclease PDEase_II PF02112.15 gi|150398775|ref|YP_001322542.1| - 0.016 14.3 0.2 0.053 12.6 0.0 1.8 2 0 0 2 2 2 0 cAMP phosphodiesterases class-II PK_C PF02887.16 gi|150398776|ref|YP_001322543.1| - 7.9e-11 42.2 0.2 1.3e-10 41.5 0.2 1.4 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain DUF5397 PF17375.2 gi|150398776|ref|YP_001322543.1| - 0.097 12.4 0.1 0.18 11.5 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5397) AIRS_C PF02769.22 gi|150398777|ref|YP_001322544.1| - 8.5e-24 84.4 0.4 1.6e-23 83.5 0.4 1.5 1 1 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|150398777|ref|YP_001322544.1| - 2.9e-14 53.5 0.5 1.4e-13 51.3 0.1 2.2 2 1 0 2 2 2 1 AIR synthase related protein, N-terminal domain Class_IIIsignal PF04021.12 gi|150398778|ref|YP_001322545.1| - 1.9e-06 27.6 3.1 3e-06 27.0 3.1 1.3 1 0 0 1 1 1 1 Class III signal peptide DUF126 PF01989.16 gi|150398779|ref|YP_001322546.1| - 5.6e-25 86.9 0.3 5.6e-25 86.9 0.3 1.8 2 0 0 2 2 2 1 Aconitase X swivel domain NOG1_N PF17835.1 gi|150398780|ref|YP_001322547.1| - 6.1e-44 149.8 0.3 1.2e-43 148.8 0.3 1.5 1 0 0 1 1 1 1 NOG1 N-terminal helical domain NOG1 PF06858.14 gi|150398780|ref|YP_001322547.1| - 2.9e-20 71.8 0.2 5.6e-20 70.9 0.2 1.5 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 gi|150398780|ref|YP_001322547.1| - 7.9e-20 71.0 0.0 1.5e-19 70.2 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|150398780|ref|YP_001322547.1| - 1.1e-13 51.0 0.2 1.7e-13 50.4 0.2 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B PduV-EutP PF10662.9 gi|150398780|ref|YP_001322547.1| - 3.5e-06 26.8 0.3 0.00021 21.1 0.1 2.3 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 gi|150398780|ref|YP_001322547.1| - 2.1e-05 24.5 1.1 0.015 15.2 0.1 2.7 2 1 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 gi|150398780|ref|YP_001322547.1| - 3.4e-05 23.5 0.2 0.0075 15.8 0.1 2.5 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 gi|150398780|ref|YP_001322547.1| - 0.00061 19.3 0.1 0.0012 18.3 0.1 1.5 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 gi|150398780|ref|YP_001322547.1| - 0.0021 17.6 0.8 1.1 8.7 0.2 2.2 2 0 0 2 2 2 2 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 gi|150398780|ref|YP_001322547.1| - 0.0065 16.5 0.5 0.028 14.4 0.1 2.0 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain TniB PF05621.11 gi|150398780|ref|YP_001322547.1| - 0.0088 15.5 0.0 0.029 13.8 0.0 1.8 2 0 0 2 2 2 1 Bacterial TniB protein Dynamin_N PF00350.23 gi|150398780|ref|YP_001322547.1| - 0.0092 16.1 0.2 0.92 9.5 0.0 2.4 1 1 1 2 2 2 1 Dynamin family AAA_18 PF13238.6 gi|150398780|ref|YP_001322547.1| - 0.026 15.1 0.0 0.057 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 gi|150398780|ref|YP_001322547.1| - 0.11 12.1 0.1 2.5 7.6 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain KTI12 PF08433.10 gi|150398780|ref|YP_001322547.1| - 0.12 11.8 0.0 0.37 10.2 0.0 1.8 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_16 PF13191.6 gi|150398780|ref|YP_001322547.1| - 0.15 12.4 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|150398780|ref|YP_001322547.1| - 0.17 12.2 0.1 0.8 10.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain CLP1_P PF16575.5 gi|150398780|ref|YP_001322547.1| - 0.39 10.5 2.7 14 5.4 0.1 3.0 2 1 1 4 4 4 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Rhodanese PF00581.20 gi|150398781|ref|YP_001322548.1| - 1.8e-14 54.1 0.0 3.2e-14 53.4 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain UCH_N PF16674.5 gi|150398781|ref|YP_001322548.1| - 0.022 14.7 0.4 0.25 11.3 0.0 2.5 3 0 0 3 3 3 0 N-terminal of ubiquitin carboxyl-terminal hydrolase 37 AAA_18 PF13238.6 gi|150398782|ref|YP_001322549.1| - 2.1e-05 25.1 1.6 3.5e-05 24.3 0.2 2.1 2 1 0 2 2 2 1 AAA domain ABC_tran PF00005.27 gi|150398782|ref|YP_001322549.1| - 0.038 14.5 0.1 0.064 13.8 0.1 1.8 1 1 0 1 1 1 0 ABC transporter AAA_22 PF13401.6 gi|150398782|ref|YP_001322549.1| - 0.044 14.1 0.1 0.11 12.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|150398782|ref|YP_001322549.1| - 0.059 13.1 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|150398782|ref|YP_001322549.1| - 0.088 12.8 0.3 0.19 11.7 0.2 1.7 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit AAA_5 PF07728.14 gi|150398782|ref|YP_001322549.1| - 0.095 12.7 0.0 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) CoaE PF01121.20 gi|150398782|ref|YP_001322549.1| - 0.11 12.2 0.1 1.6 8.3 0.0 2.6 2 1 1 3 3 3 0 Dephospho-CoA kinase TsaE PF02367.17 gi|150398782|ref|YP_001322549.1| - 0.15 12.1 0.2 2.6 8.0 0.2 2.2 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ArgJ PF01960.18 gi|150398783|ref|YP_001322550.1| - 2e-130 434.9 13.6 2.4e-130 434.6 13.6 1.0 1 0 0 1 1 1 1 ArgJ family WSS_VP PF12175.8 gi|150398783|ref|YP_001322550.1| - 0.0087 15.5 1.5 0.017 14.6 0.1 2.1 2 0 0 2 2 2 1 White spot syndrome virus structural envelope protein VP Polysacc_synt PF01943.17 gi|150398784|ref|YP_001322551.1| - 5.4e-32 111.3 23.4 5.4e-32 111.3 23.4 2.2 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|150398784|ref|YP_001322551.1| - 5.3e-21 75.2 25.2 2.2e-17 63.5 11.0 4.3 4 1 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|150398784|ref|YP_001322551.1| - 4e-09 36.3 16.4 4e-09 36.3 16.4 4.3 3 2 1 4 4 4 1 MatE MurJ PF03023.14 gi|150398784|ref|YP_001322551.1| - 1.7e-08 33.5 30.0 1.7e-08 33.5 30.0 1.5 1 1 0 1 1 1 1 Lipid II flippase MurJ TPR_1 PF00515.28 gi|150398785|ref|YP_001322552.1| - 1.2e-28 97.7 8.0 1.1e-10 40.9 0.2 4.3 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|150398785|ref|YP_001322552.1| - 1.1e-26 90.8 1.8 7.2e-09 35.1 0.0 4.2 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_8 PF13181.6 gi|150398785|ref|YP_001322552.1| - 2.4e-16 58.5 4.3 2.8e-05 24.0 0.1 4.4 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_3 PF07720.12 gi|150398785|ref|YP_001322552.1| - 1e-13 50.9 6.5 0.00025 21.0 0.2 3.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|150398785|ref|YP_001322552.1| - 7.3e-12 45.4 0.0 0.034 14.4 0.0 4.0 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|150398785|ref|YP_001322552.1| - 9.5e-12 44.8 1.0 0.042 14.5 0.0 4.7 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|150398785|ref|YP_001322552.1| - 1.2e-11 45.0 0.0 7.7e-06 26.5 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|150398785|ref|YP_001322552.1| - 1.7e-11 43.6 4.4 2.1e-05 24.1 0.1 4.2 3 1 1 4 4 4 2 TPR repeat Fis1_TPR_C PF14853.6 gi|150398785|ref|YP_001322552.1| - 4e-11 42.8 11.6 0.0054 16.8 0.4 4.4 4 1 0 4 4 4 3 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 gi|150398785|ref|YP_001322552.1| - 2.1e-09 36.7 0.0 0.082 13.0 0.0 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|150398785|ref|YP_001322552.1| - 1.1e-08 35.4 0.0 0.00022 21.6 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|150398785|ref|YP_001322552.1| - 1.8e-08 34.5 0.0 0.29 12.0 0.0 4.0 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|150398785|ref|YP_001322552.1| - 1.9e-07 31.1 0.0 0.028 14.6 0.0 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|150398785|ref|YP_001322552.1| - 1.4e-06 28.5 2.3 0.096 12.9 0.0 3.2 3 0 0 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 gi|150398785|ref|YP_001322552.1| - 1.5e-06 27.9 0.1 0.44 10.5 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat MIT PF04212.18 gi|150398785|ref|YP_001322552.1| - 4.2e-05 23.5 10.3 0.13 12.3 0.2 4.4 4 1 0 4 4 4 1 MIT (microtubule interacting and transport) domain TPR_17 PF13431.6 gi|150398785|ref|YP_001322552.1| - 0.00025 21.2 4.1 0.34 11.4 0.0 4.2 5 0 0 5 5 4 2 Tetratricopeptide repeat DUF5113 PF17140.4 gi|150398785|ref|YP_001322552.1| - 0.00052 19.9 3.4 2.6 7.9 0.1 3.8 1 1 3 4 4 4 2 Domain of unknown function (DUF5113) Coatomer_E PF04733.14 gi|150398785|ref|YP_001322552.1| - 0.00071 19.1 0.7 0.0025 17.3 0.1 2.0 1 1 0 2 2 2 1 Coatomer epsilon subunit SRP_TPR_like PF17004.5 gi|150398785|ref|YP_001322552.1| - 0.00089 19.3 7.6 0.069 13.2 0.1 2.7 2 1 0 2 2 2 1 Putative TPR-like repeat MAS20 PF02064.15 gi|150398785|ref|YP_001322552.1| - 0.0011 19.1 0.2 0.18 11.9 0.1 2.4 2 0 0 2 2 2 1 MAS20 protein import receptor PPR PF01535.20 gi|150398785|ref|YP_001322552.1| - 0.0033 17.6 3.4 0.95 9.9 0.3 4.2 4 0 0 4 4 4 1 PPR repeat TPR_15 PF13429.6 gi|150398785|ref|YP_001322552.1| - 0.028 13.7 0.0 1.8 7.7 0.0 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat OSCP PF00213.18 gi|150398785|ref|YP_001322552.1| - 0.029 14.5 0.7 17 5.5 0.1 3.0 1 1 2 3 3 3 0 ATP synthase delta (OSCP) subunit Foie-gras_1 PF11817.8 gi|150398785|ref|YP_001322552.1| - 0.18 11.4 0.9 4.3 6.9 0.0 2.4 2 1 1 3 3 3 0 Foie gras liver health family 1 TPR_1 PF00515.28 gi|150398786|ref|YP_001322553.1| - 3.6e-19 67.7 7.3 4.7e-09 35.7 0.2 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|150398786|ref|YP_001322553.1| - 6.7e-19 66.4 2.5 2.9e-08 33.2 0.1 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|150398786|ref|YP_001322553.1| - 2.1e-15 56.1 0.4 4.2e-06 26.4 0.1 3.1 1 1 2 3 3 3 3 TPR repeat TPR_17 PF13431.6 gi|150398786|ref|YP_001322553.1| - 1.3e-13 50.2 4.9 2.1e-06 27.7 0.4 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|150398786|ref|YP_001322553.1| - 9e-13 47.3 6.4 5.1e-07 29.4 0.3 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|150398786|ref|YP_001322553.1| - 9.5e-09 35.4 0.7 4.1e-06 27.0 0.4 2.8 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|150398786|ref|YP_001322553.1| - 6.5e-08 33.0 0.4 2.4e-05 24.7 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|150398786|ref|YP_001322553.1| - 2.8e-07 30.8 0.0 0.033 15.0 0.0 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|150398786|ref|YP_001322553.1| - 1.2e-06 28.2 0.2 0.014 15.4 0.1 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat Sel1 PF08238.12 gi|150398786|ref|YP_001322553.1| - 2.1e-06 28.2 0.1 0.18 12.5 0.0 3.2 3 0 0 3 3 3 1 Sel1 repeat ANAPC3 PF12895.7 gi|150398786|ref|YP_001322553.1| - 2.4e-05 24.5 4.2 0.00012 22.2 3.3 2.0 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 Rapsyn_N PF10579.9 gi|150398786|ref|YP_001322553.1| - 5.3e-05 23.2 0.2 0.00058 19.9 0.0 2.4 1 1 2 3 3 3 1 Rapsyn N-terminal myristoylation and linker region TPR_10 PF13374.6 gi|150398786|ref|YP_001322553.1| - 0.00023 21.0 0.1 0.19 11.7 0.1 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|150398786|ref|YP_001322553.1| - 0.00034 19.6 0.2 0.00043 19.3 0.2 1.1 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 TPR_16 PF13432.6 gi|150398786|ref|YP_001322553.1| - 0.0016 19.1 0.0 0.028 15.1 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|150398786|ref|YP_001322553.1| - 0.0021 18.6 0.2 0.44 11.3 0.0 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|150398786|ref|YP_001322553.1| - 0.0028 17.7 0.0 0.013 15.6 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|150398786|ref|YP_001322553.1| - 0.0091 16.0 2.7 0.04 14.0 0.2 2.6 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat SNAP PF14938.6 gi|150398786|ref|YP_001322553.1| - 0.0093 15.4 0.9 0.023 14.1 1.0 1.6 1 1 0 1 1 1 1 Soluble NSF attachment protein, SNAP PPR PF01535.20 gi|150398786|ref|YP_001322553.1| - 0.012 15.8 2.0 1.5 9.2 0.1 3.3 3 0 0 3 3 3 0 PPR repeat SGTA_dimer PF16546.5 gi|150398786|ref|YP_001322553.1| - 0.028 14.2 0.1 1 9.2 0.0 2.4 1 1 1 2 2 2 0 Homodimerisation domain of SGTA TAtT PF16811.5 gi|150398786|ref|YP_001322553.1| - 0.03 13.6 0.2 0.51 9.6 0.0 2.0 1 1 0 2 2 2 0 TRAP transporter T-component TPR_15 PF13429.6 gi|150398786|ref|YP_001322553.1| - 0.039 13.2 0.2 0.7 9.0 0.1 1.9 1 1 1 2 2 2 0 Tetratricopeptide repeat s48_45 PF07422.13 gi|150398786|ref|YP_001322553.1| - 0.18 12.4 2.7 3.6 8.2 0.5 2.1 1 1 1 2 2 2 0 Sexual stage antigen s48/45 domain NSF PF02071.20 gi|150398786|ref|YP_001322553.1| - 0.2 12.5 2.1 45 5.5 0.0 3.9 4 0 0 4 4 3 0 Aromatic-di-Alanine (AdAR) repeat PPTA PF01239.22 gi|150398786|ref|YP_001322553.1| - 1.4 8.8 4.4 25 4.8 0.3 3.1 3 0 0 3 3 3 0 Protein prenyltransferase alpha subunit repeat GMP_synt_C PF00958.22 gi|150398787|ref|YP_001322554.1| - 1.3e-36 124.5 0.1 3.7e-36 123.1 0.0 1.8 2 0 0 2 2 2 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|150398787|ref|YP_001322554.1| - 6.4e-14 51.7 0.4 8.6e-08 31.6 0.1 2.2 2 0 0 2 2 2 2 NAD synthase ThiI PF02568.14 gi|150398787|ref|YP_001322554.1| - 4.9e-07 29.5 0.0 9.5e-07 28.6 0.0 1.4 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|150398787|ref|YP_001322554.1| - 3.6e-06 26.0 0.1 0.002 17.0 0.0 2.2 2 0 0 2 2 2 2 tRNA methyl transferase QueC PF06508.13 gi|150398787|ref|YP_001322554.1| - 5.1e-05 22.9 0.0 0.045 13.2 0.0 2.2 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|150398787|ref|YP_001322554.1| - 0.0018 18.1 0.0 0.0029 17.4 0.0 1.4 1 1 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|150398787|ref|YP_001322554.1| - 0.0029 17.7 0.0 0.0044 17.1 0.0 1.5 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Arginosuc_synth PF00764.19 gi|150398787|ref|YP_001322554.1| - 0.016 14.5 0.1 0.035 13.4 0.1 1.6 2 0 0 2 2 2 0 Arginosuccinate synthase CTP_synth_N PF06418.14 gi|150398788|ref|YP_001322555.1| - 2.4e-130 433.6 0.4 3.2e-130 433.2 0.4 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|150398788|ref|YP_001322555.1| - 9.3e-56 188.6 0.0 1.7e-55 187.8 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|150398788|ref|YP_001322555.1| - 6.4e-06 26.1 0.1 1.8e-05 24.6 0.0 1.8 2 1 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|150398788|ref|YP_001322555.1| - 0.0098 15.9 0.0 0.061 13.4 0.0 2.3 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF1611 PF07755.11 gi|150398788|ref|YP_001322555.1| - 0.094 12.0 0.2 0.28 10.4 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_C) P-loop domain RNase_T PF00929.24 gi|150398789|ref|YP_001322556.1| - 2e-14 54.5 0.1 4.6e-14 53.3 0.1 1.6 1 1 0 1 1 1 1 Exonuclease DNA_pol_A_exo1 PF01612.20 gi|150398789|ref|YP_001322556.1| - 8.3e-05 22.4 0.3 0.029 14.1 0.1 2.9 2 1 0 2 2 2 2 3'-5' exonuclease RNase_H_2 PF13482.6 gi|150398789|ref|YP_001322556.1| - 0.0018 18.3 0.1 0.0086 16.1 0.1 2.0 1 1 0 1 1 1 1 RNase_H superfamily DUF5051 PF16473.5 gi|150398789|ref|YP_001322556.1| - 0.019 15.0 0.0 0.053 13.5 0.0 1.7 1 1 0 1 1 1 0 3' exoribonuclease, RNase T-like DEAD PF00270.29 gi|150398790|ref|YP_001322557.1| - 3.7e-25 88.7 0.0 9.1e-25 87.4 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|150398790|ref|YP_001322557.1| - 7.7e-13 48.8 0.0 1.9e-12 47.5 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|150398790|ref|YP_001322557.1| - 3e-10 40.4 0.2 9.2e-09 35.6 0.2 3.0 1 1 0 1 1 1 1 Helicase conserved C-terminal domain HHH_5 PF14520.6 gi|150398790|ref|YP_001322557.1| - 0.0094 16.5 0.4 0.031 14.9 0.4 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix domain Serum_albumin PF00273.20 gi|150398790|ref|YP_001322557.1| - 0.1 12.4 0.9 0.17 11.6 0.9 1.3 1 0 0 1 1 1 0 Serum albumin family DNA_pol_lambd_f PF10391.9 gi|150398790|ref|YP_001322557.1| - 0.11 12.3 0.0 0.32 10.9 0.0 1.8 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda DUF2408 PF10303.9 gi|150398790|ref|YP_001322557.1| - 1.3 9.6 6.1 2 9.0 0.3 3.6 2 2 2 4 4 4 0 Protein of unknown function (DUF2408) CbiM PF01891.16 gi|150398791|ref|YP_001322558.1| - 1.2e-58 198.4 22.3 1.4e-58 198.2 22.3 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region CitMHS PF03600.16 gi|150398791|ref|YP_001322558.1| - 0.74 8.9 21.7 1 8.5 21.7 1.1 1 0 0 1 1 1 0 Citrate transporter PDGLE PF13190.6 gi|150398792|ref|YP_001322559.1| - 2e-18 66.1 0.1 2.4e-18 65.8 0.1 1.1 1 0 0 1 1 1 1 PDGLE domain ABC2_membrane_2 PF12679.7 gi|150398792|ref|YP_001322559.1| - 0.0012 18.2 0.1 0.0015 17.9 0.1 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|150398792|ref|YP_001322559.1| - 0.0042 16.2 0.2 0.0059 15.8 0.2 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein TrbC PF04956.13 gi|150398792|ref|YP_001322559.1| - 0.02 15.1 2.4 0.18 12.0 0.0 2.1 2 0 0 2 2 2 0 TrbC/VIRB2 family Yip1 PF04893.17 gi|150398792|ref|YP_001322559.1| - 0.043 13.5 2.4 0.064 13.0 2.4 1.3 1 1 0 1 1 1 0 Yip1 domain SseC PF04888.12 gi|150398792|ref|YP_001322559.1| - 0.06 12.9 0.0 0.06 12.9 0.0 1.1 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family OppC_N PF12911.7 gi|150398792|ref|YP_001322559.1| - 0.16 12.0 3.5 0.39 10.7 0.0 2.2 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C Gram_pos_anchor PF00746.21 gi|150398792|ref|YP_001322559.1| - 1.3 9.0 6.2 5 7.2 0.5 2.2 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Dabb PF07876.12 gi|150398793|ref|YP_001322560.1| - 1.5e-23 83.2 1.9 1.7e-23 83.1 1.9 1.0 1 0 0 1 1 1 1 Stress responsive A/B Barrel Domain BBS2_N PF14781.6 gi|150398793|ref|YP_001322560.1| - 0.068 13.1 0.6 0.085 12.8 0.6 1.2 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal ABM PF03992.16 gi|150398793|ref|YP_001322560.1| - 0.07 13.2 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Antibiotic biosynthesis monooxygenase CbiQ PF02361.16 gi|150398794|ref|YP_001322561.1| - 2.8e-37 128.5 15.8 4.1e-37 127.9 15.8 1.2 1 0 0 1 1 1 1 Cobalt transport protein TPR_1 PF00515.28 gi|150398795|ref|YP_001322562.1| - 4.7e-63 206.6 36.5 5.4e-08 32.3 0.2 10.4 11 0 0 11 11 10 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|150398795|ref|YP_001322562.1| - 6e-60 194.6 25.1 9.6e-08 31.6 0.1 10.2 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_8 PF13181.6 gi|150398795|ref|YP_001322562.1| - 1.8e-45 149.3 39.4 6.2e-07 29.1 0.1 10.6 11 0 0 11 11 10 8 Tetratricopeptide repeat TPR_7 PF13176.6 gi|150398795|ref|YP_001322562.1| - 2.6e-39 130.3 8.7 2.3e-05 24.1 0.0 10.4 9 1 1 10 10 10 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|150398795|ref|YP_001322562.1| - 7e-38 128.8 10.2 1.4e-06 28.5 0.0 8.1 3 3 5 8 8 8 8 Tetratricopeptide repeat TPR_16 PF13432.6 gi|150398795|ref|YP_001322562.1| - 1.9e-34 118.0 0.0 7.3e-07 29.7 0.0 5.8 4 1 2 6 6 6 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|150398795|ref|YP_001322562.1| - 8.9e-33 111.7 33.0 1.3e-06 28.0 0.0 9.2 3 3 7 10 10 10 9 TPR repeat TPR_14 PF13428.6 gi|150398795|ref|YP_001322562.1| - 3.2e-30 102.2 0.0 0.00018 22.1 0.0 9.8 3 2 7 10 10 10 6 Tetratricopeptide repeat TPR_6 PF13174.6 gi|150398795|ref|YP_001322562.1| - 5.7e-28 95.7 17.4 0.00072 20.0 0.0 10.3 10 0 0 10 10 10 6 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|150398795|ref|YP_001322562.1| - 8.9e-28 96.3 20.0 9.5e-09 35.4 3.9 5.5 1 1 5 6 6 6 6 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 gi|150398795|ref|YP_001322562.1| - 2.7e-27 95.1 0.0 0.00094 19.7 0.0 6.5 3 2 5 8 8 8 6 Tetratricopeptide repeat TPR_17 PF13431.6 gi|150398795|ref|YP_001322562.1| - 3e-22 77.4 22.2 0.00084 19.6 0.0 11.0 10 1 1 11 11 11 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|150398795|ref|YP_001322562.1| - 7.5e-15 54.3 3.3 0.72 9.8 0.0 9.0 10 1 0 10 10 10 3 Tetratricopeptide repeat TPR_15 PF13429.6 gi|150398795|ref|YP_001322562.1| - 1.4e-14 54.0 0.1 6.7e-09 35.4 0.0 4.2 2 2 1 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|150398795|ref|YP_001322562.1| - 7.4e-11 42.0 0.0 0.36 11.0 0.0 6.0 3 1 2 6 6 6 1 Tetratricopeptide repeat PPR PF01535.20 gi|150398795|ref|YP_001322562.1| - 4.8e-09 35.9 16.8 3.9 7.9 0.0 8.7 9 0 0 9 9 8 0 PPR repeat Alkyl_sulf_dimr PF14863.6 gi|150398795|ref|YP_001322562.1| - 1e-07 32.5 0.3 0.59 10.6 0.0 4.9 2 2 2 5 5 5 1 Alkyl sulfatase dimerisation TPR_21 PF09976.9 gi|150398795|ref|YP_001322562.1| - 1.1e-07 31.8 0.4 0.95 9.1 0.0 5.4 2 2 4 6 6 6 1 Tetratricopeptide repeat-like domain DUF3856 PF12968.7 gi|150398795|ref|YP_001322562.1| - 1.7e-07 31.4 0.2 0.81 9.8 0.0 6.2 3 2 1 5 5 5 1 Domain of Unknown Function (DUF3856) NARP1 PF12569.8 gi|150398795|ref|YP_001322562.1| - 5.1e-07 29.0 15.7 0.1 11.5 0.2 5.0 1 1 5 6 6 6 4 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.6 gi|150398795|ref|YP_001322562.1| - 1e-06 28.7 21.0 0.2 11.7 0.1 7.3 7 2 1 8 8 8 2 Fis1 C-terminal tetratricopeptide repeat SNAP PF14938.6 gi|150398795|ref|YP_001322562.1| - 2.2e-06 27.3 6.1 0.00097 18.6 0.1 3.9 2 2 1 3 3 3 1 Soluble NSF attachment protein, SNAP BTAD PF03704.17 gi|150398795|ref|YP_001322562.1| - 9.4e-06 26.1 0.1 1.1 9.7 0.1 3.9 4 1 0 4 4 3 1 Bacterial transcriptional activator domain TPR_20 PF14561.6 gi|150398795|ref|YP_001322562.1| - 4.2e-05 23.8 0.9 3.8 7.9 0.0 5.6 4 1 2 7 7 6 1 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|150398795|ref|YP_001322562.1| - 0.00029 20.3 0.0 8.5 5.6 0.0 4.2 1 1 2 4 4 4 0 MalT-like TPR region Coatomer_E PF04733.14 gi|150398795|ref|YP_001322562.1| - 0.00058 19.4 4.6 0.11 11.8 0.1 3.5 3 1 1 4 4 4 1 Coatomer epsilon subunit Paf67 PF10255.9 gi|150398795|ref|YP_001322562.1| - 0.00091 18.3 1.0 0.03 13.3 0.2 2.9 2 2 1 3 3 3 1 RNA polymerase I-associated factor PAF67 DUF3808 PF10300.9 gi|150398795|ref|YP_001322562.1| - 0.0012 17.7 4.3 0.072 11.8 0.1 3.4 3 1 1 4 4 4 1 Protein of unknown function (DUF3808) MIT PF04212.18 gi|150398795|ref|YP_001322562.1| - 0.0016 18.5 20.7 5.9 7.0 0.1 8.0 6 2 2 8 8 8 0 MIT (microtubule interacting and transport) domain TPR_3 PF07720.12 gi|150398795|ref|YP_001322562.1| - 0.0021 18.0 19.5 0.54 10.3 0.0 7.5 9 0 0 9 9 7 1 Tetratricopeptide repeat Foie-gras_1 PF11817.8 gi|150398795|ref|YP_001322562.1| - 0.0029 17.2 2.1 0.34 10.5 0.1 3.8 4 1 0 4 4 3 1 Foie gras liver health family 1 TPR_5 PF12688.7 gi|150398795|ref|YP_001322562.1| - 0.0048 17.1 0.1 7.4 6.8 0.0 4.5 2 2 4 6 6 6 0 Tetratrico peptide repeat Rapsyn_N PF10579.9 gi|150398795|ref|YP_001322562.1| - 0.0049 16.9 5.1 11 6.2 0.1 5.4 2 1 3 6 6 6 0 Rapsyn N-terminal myristoylation and linker region PknG_TPR PF16918.5 gi|150398795|ref|YP_001322562.1| - 0.0092 14.7 0.0 0.099 11.3 0.0 2.2 2 1 0 2 2 2 1 Protein kinase G tetratricopeptide repeat DUF627 PF04781.12 gi|150398795|ref|YP_001322562.1| - 0.0099 15.9 3.0 8.9 6.4 0.0 4.5 4 1 1 5 5 5 0 Protein of unknown function (DUF627) SPO22 PF08631.10 gi|150398795|ref|YP_001322562.1| - 0.014 14.9 10.4 3.2 7.2 0.2 4.7 4 1 0 5 5 5 0 Meiosis protein SPO22/ZIP4 like RPN7 PF10602.9 gi|150398795|ref|YP_001322562.1| - 0.016 15.0 14.6 1.5 8.5 0.0 6.5 2 1 1 7 7 7 0 26S proteasome subunit RPN7 ChAPs PF09295.10 gi|150398795|ref|YP_001322562.1| - 0.026 13.5 0.1 0.1 11.6 0.0 1.9 1 1 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) SPOB_a PF14689.6 gi|150398795|ref|YP_001322562.1| - 0.026 14.2 5.5 0.12 12.0 0.2 4.3 6 0 0 6 6 5 0 Sensor_kinase_SpoOB-type, alpha-helical domain TOM20_plant PF06552.12 gi|150398795|ref|YP_001322562.1| - 0.033 13.9 3.0 20 4.8 0.0 4.7 3 1 1 5 5 5 0 Plant specific mitochondrial import receptor subunit TOM20 Prefoldin PF02996.17 gi|150398795|ref|YP_001322562.1| - 0.056 13.4 7.0 0.11 12.4 0.1 3.6 4 1 0 4 4 2 0 Prefoldin subunit NRBF2_MIT PF17169.4 gi|150398795|ref|YP_001322562.1| - 0.057 13.7 5.4 50 4.2 0.0 5.4 5 2 0 5 5 4 0 MIT domain of nuclear receptor-binding factor 2 PPTA PF01239.22 gi|150398795|ref|YP_001322562.1| - 0.069 12.9 1.4 0.97 9.3 0.2 3.0 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat DUF1955 PF09205.10 gi|150398795|ref|YP_001322562.1| - 0.14 11.9 8.2 5.5 6.7 0.0 5.0 4 2 2 6 6 6 0 Domain of unknown function (DUF1955) PPR_2 PF13041.6 gi|150398795|ref|YP_001322562.1| - 0.27 11.4 7.9 22 5.4 0.0 5.7 6 0 0 6 6 6 0 PPR repeat family HTH_Bact PF18768.1 gi|150398795|ref|YP_001322562.1| - 0.29 10.8 5.3 1.9 8.1 0.1 4.1 4 0 0 4 4 3 0 Helix-turn-helix bacterial domain Cnd1 PF12717.7 gi|150398797|ref|YP_001322564.1| - 0.01 15.9 3.9 0.26 11.3 2.1 2.6 2 1 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 Ist1 PF03398.14 gi|150398797|ref|YP_001322564.1| - 0.05 13.5 0.6 7.4 6.5 0.1 2.6 2 0 0 2 2 2 0 Regulator of Vps4 activity in the MVB pathway CoaE PF01121.20 gi|150398797|ref|YP_001322564.1| - 0.07 12.8 0.1 0.15 11.7 0.1 1.5 1 0 0 1 1 1 0 Dephospho-CoA kinase AIRS PF00586.24 gi|150398798|ref|YP_001322565.1| - 5.5e-09 36.6 0.0 9.8e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|150398798|ref|YP_001322565.1| - 5.9e-08 33.0 0.0 2.3e-07 31.1 0.0 1.9 1 1 0 1 1 1 1 AIR synthase related protein, C-terminal domain TFIID-18kDa PF02269.16 gi|150398799|ref|YP_001322566.1| - 0.019 15.0 0.2 0.043 13.9 0.0 1.7 2 0 0 2 2 2 0 Transcription initiation factor IID, 18kD subunit Iso_dh PF00180.20 gi|150398800|ref|YP_001322567.1| - 1.1e-102 343.8 0.0 1.6e-102 343.2 0.0 1.2 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase tRNA_bind_4 PF18490.1 gi|150398801|ref|YP_001322568.1| - 7.3e-50 168.9 5.8 1.1e-49 168.3 5.8 1.3 1 0 0 1 1 1 1 tRNA-binding domain tRNA-synt_2b PF00587.25 gi|150398801|ref|YP_001322568.1| - 2.5e-09 37.4 0.0 4.8e-09 36.4 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) RNase_P_Rpp14 PF01900.19 gi|150398802|ref|YP_001322569.1| - 1.8e-14 53.8 0.0 2.4e-14 53.4 0.0 1.1 1 0 0 1 1 1 1 Rpp14/Pop5 family QRPTase_C PF01729.19 gi|150398803|ref|YP_001322570.1| - 1.9e-57 193.7 0.3 2.4e-57 193.4 0.3 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|150398803|ref|YP_001322570.1| - 1.2e-21 76.5 0.0 2.1e-21 75.7 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.19 gi|150398803|ref|YP_001322570.1| - 0.017 14.6 0.0 0.038 13.4 0.0 1.6 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family B12-binding PF02310.19 gi|150398803|ref|YP_001322570.1| - 0.083 12.9 0.0 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 B12 binding domain Radical_SAM PF04055.21 gi|150398804|ref|YP_001322571.1| - 7e-11 42.8 1.4 1.1e-10 42.1 1.4 1.3 1 0 0 1 1 1 1 Radical SAM superfamily S_layer_C PF05124.12 gi|150398805|ref|YP_001322572.1| - 5.6e-68 229.2 12.0 1.2e-67 228.1 12.0 1.6 1 0 0 1 1 1 1 S-layer like family, C-terminal region S_layer_N PF05123.12 gi|150398805|ref|YP_001322572.1| - 1e-58 199.5 4.1 1e-58 199.5 4.1 2.6 2 1 0 2 2 2 1 S-layer like family, N-terminal region RrnaAD PF00398.20 gi|150398806|ref|YP_001322573.1| - 2e-11 43.5 0.2 2.9e-11 42.9 0.2 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|150398806|ref|YP_001322573.1| - 3.2e-10 40.6 0.0 8.1e-10 39.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|150398806|ref|YP_001322573.1| - 6e-06 26.9 0.9 5.7e-05 23.8 0.0 2.7 3 1 1 4 4 4 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|150398806|ref|YP_001322573.1| - 1.3e-05 25.8 0.0 2.8e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|150398806|ref|YP_001322573.1| - 2.9e-05 23.9 0.0 4.4e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|150398806|ref|YP_001322573.1| - 8.4e-05 22.0 0.1 0.00017 21.0 0.0 1.6 2 0 0 2 2 2 1 rRNA small subunit methyltransferase G Methyltransf_23 PF13489.6 gi|150398806|ref|YP_001322573.1| - 0.0001 22.2 0.0 0.00015 21.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Rsm22 PF09243.10 gi|150398806|ref|YP_001322573.1| - 0.00016 21.1 0.0 0.00023 20.5 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 PCMT PF01135.19 gi|150398806|ref|YP_001322573.1| - 0.00054 19.8 0.0 0.00077 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|150398806|ref|YP_001322573.1| - 0.00073 18.9 0.4 0.0012 18.2 0.4 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.17 gi|150398806|ref|YP_001322573.1| - 0.0015 18.0 0.0 0.0015 18.0 0.0 2.0 3 0 0 3 3 3 1 Putative methyltransferase tRNA_U5-meth_tr PF05958.11 gi|150398806|ref|YP_001322573.1| - 0.0027 16.7 0.1 0.0047 16.0 0.1 1.4 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase DREV PF05219.12 gi|150398806|ref|YP_001322573.1| - 0.0033 16.5 0.3 0.072 12.2 0.1 2.2 1 1 1 2 2 2 1 DREV methyltransferase NodS PF05401.11 gi|150398806|ref|YP_001322573.1| - 0.0077 15.9 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|150398806|ref|YP_001322573.1| - 0.036 13.6 0.0 0.06 12.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_16 PF10294.9 gi|150398806|ref|YP_001322573.1| - 0.051 13.3 0.1 0.079 12.7 0.1 1.4 1 0 0 1 1 1 0 Lysine methyltransferase MutS_III PF05192.18 gi|150398806|ref|YP_001322573.1| - 0.1 12.8 0.0 0.16 12.2 0.0 1.4 1 1 0 1 1 1 0 MutS domain III SHIPPO-rpt PF07004.12 gi|150398806|ref|YP_001322573.1| - 0.18 12.8 0.2 2.3 9.3 0.1 2.4 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat TPR_2 PF07719.17 gi|150398807|ref|YP_001322574.1| - 1e-25 87.7 12.9 5.8e-06 26.0 0.3 5.7 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_1 PF00515.28 gi|150398807|ref|YP_001322574.1| - 5.5e-24 83.0 22.3 5.2e-08 32.4 0.5 6.1 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_8 PF13181.6 gi|150398807|ref|YP_001322574.1| - 6.9e-20 69.5 17.6 0.00016 21.6 0.3 6.4 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|150398807|ref|YP_001322574.1| - 4.7e-18 64.6 19.3 7.7e-05 22.3 0.0 5.2 3 1 1 4 4 4 4 TPR repeat TPR_12 PF13424.6 gi|150398807|ref|YP_001322574.1| - 5.1e-17 61.9 4.4 1.3e-06 28.6 0.6 4.4 2 1 2 4 4 4 4 Tetratricopeptide repeat TPR_17 PF13431.6 gi|150398807|ref|YP_001322574.1| - 4.4e-13 48.6 17.3 4.1e-05 23.7 0.1 5.9 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|150398807|ref|YP_001322574.1| - 6.4e-13 49.1 0.0 9.9e-05 22.9 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|150398807|ref|YP_001322574.1| - 3.1e-12 45.9 6.2 0.023 14.6 0.4 5.5 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|150398807|ref|YP_001322574.1| - 3.8e-11 43.3 2.1 0.00093 19.7 0.0 3.9 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|150398807|ref|YP_001322574.1| - 1e-10 40.9 1.8 0.024 14.7 0.0 5.5 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|150398807|ref|YP_001322574.1| - 4.1e-09 36.5 0.0 0.012 16.4 0.0 4.6 3 1 2 5 5 5 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|150398807|ref|YP_001322574.1| - 3.1e-05 24.3 0.1 18 6.2 0.0 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|150398807|ref|YP_001322574.1| - 0.019 14.4 0.9 0.91 9.0 0.0 3.1 3 0 0 3 3 3 0 SHNi-TPR MIT PF04212.18 gi|150398807|ref|YP_001322574.1| - 0.035 14.2 10.7 0.47 10.6 0.0 4.3 3 1 1 4 4 4 0 MIT (microtubule interacting and transport) domain ANAPC5 PF12862.7 gi|150398807|ref|YP_001322574.1| - 0.037 14.1 4.5 3.7 7.7 2.8 3.5 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 5 NAPRTase_N PF17767.1 gi|150398807|ref|YP_001322574.1| - 0.66 10.4 6.2 13 6.2 0.1 3.1 3 0 0 3 3 3 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HEPN PF05168.14 gi|150398807|ref|YP_001322574.1| - 6 7.0 11.8 0.39 10.9 3.2 3.3 2 1 1 4 4 4 0 HEPN domain Fis1_TPR_C PF14853.6 gi|150398807|ref|YP_001322574.1| - 6.9 6.8 8.2 74 3.5 0.0 4.6 4 1 1 5 5 4 0 Fis1 C-terminal tetratricopeptide repeat TPR_3 PF07720.12 gi|150398807|ref|YP_001322574.1| - 7.1 6.7 15.3 22 5.2 0.1 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat Porphobil_deam PF01379.20 gi|150398808|ref|YP_001322575.1| - 9.5e-65 217.9 0.0 1.2e-64 217.6 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|150398808|ref|YP_001322575.1| - 1.7e-08 34.7 0.0 5.1e-08 33.2 0.0 1.9 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain MacB_PCD PF12704.7 gi|150398809|ref|YP_001322576.1| - 3e-31 109.3 0.1 3e-31 109.3 0.1 1.9 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|150398809|ref|YP_001322576.1| - 4.2e-13 49.6 15.1 2.7e-12 47.0 5.7 3.2 3 0 0 3 3 3 2 FtsX-like permease family TMEM237 PF15383.6 gi|150398809|ref|YP_001322576.1| - 0.025 13.7 0.1 0.1 11.7 0.0 1.9 2 0 0 2 2 2 0 Transmembrane protein 237 Phage_holin_3_6 PF07332.11 gi|150398809|ref|YP_001322576.1| - 0.88 9.6 8.5 18 5.4 0.1 3.0 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III dCMP_cyt_deam_1 PF00383.23 gi|150398810|ref|YP_001322577.1| - 2.6e-23 81.8 0.1 3.4e-23 81.4 0.1 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|150398810|ref|YP_001322577.1| - 7.3e-22 77.6 0.8 8.4e-22 77.4 0.8 1.0 1 0 0 1 1 1 1 MafB19-like deaminase SNAD4 PF18750.1 gi|150398810|ref|YP_001322577.1| - 0.00012 22.1 0.2 0.00072 19.7 0.2 2.1 1 1 1 2 2 2 1 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC2 PF18772.1 gi|150398810|ref|YP_001322577.1| - 0.00029 20.9 0.5 0.01 15.9 0.5 2.0 1 1 0 1 1 1 1 APOBEC2 APOBEC4_like PF18774.1 gi|150398810|ref|YP_001322577.1| - 0.00051 20.0 0.3 0.0017 18.3 0.3 1.7 1 1 0 1 1 1 1 APOBEC4-like -AID/APOBEC-deaminase NAD1 PF18778.1 gi|150398810|ref|YP_001322577.1| - 0.0007 19.7 0.8 0.04 14.0 0.8 2.1 1 1 0 1 1 1 1 Novel AID APOBEC clade 1 APOBEC3 PF18771.1 gi|150398810|ref|YP_001322577.1| - 0.0094 16.1 0.2 0.025 14.7 0.2 1.7 1 1 0 1 1 1 1 APOBEC3 XOO_2897-deam PF14440.6 gi|150398810|ref|YP_001322577.1| - 0.014 15.5 0.0 0.034 14.2 0.0 1.7 2 0 0 2 2 2 0 Xanthomonas XOO_2897-like deaminase APOBEC4 PF18775.1 gi|150398810|ref|YP_001322577.1| - 0.021 15.0 0.9 1.1 9.5 0.0 2.2 1 1 1 2 2 2 0 APOBEC4 Bd3614-deam PF14439.6 gi|150398810|ref|YP_001322577.1| - 0.025 14.6 0.6 0.071 13.2 0.4 1.8 1 1 1 2 2 2 0 Bd3614-like deaminase APOBEC_N PF08210.11 gi|150398810|ref|YP_001322577.1| - 0.04 13.8 1.1 6.3 6.7 0.1 2.1 1 1 1 2 2 2 0 APOBEC-like N-terminal domain ABC_tran PF00005.27 gi|150398811|ref|YP_001322578.1| - 9.2e-33 113.7 0.1 2e-32 112.6 0.1 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|150398811|ref|YP_001322578.1| - 9.5e-09 35.5 0.6 0.0007 19.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system CBS PF00571.28 gi|150398811|ref|YP_001322578.1| - 3.8e-05 24.1 0.0 0.076 13.5 0.0 2.7 2 0 0 2 2 2 2 CBS domain AAA_29 PF13555.6 gi|150398811|ref|YP_001322578.1| - 5e-05 23.0 0.1 0.00011 21.9 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 gi|150398811|ref|YP_001322578.1| - 6.1e-05 22.0 0.1 0.15 10.8 0.0 2.2 2 0 0 2 2 2 2 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 gi|150398811|ref|YP_001322578.1| - 0.00056 19.9 0.1 0.002 18.1 0.1 1.9 1 0 0 1 1 1 1 RsgA GTPase ATPase_2 PF01637.18 gi|150398811|ref|YP_001322578.1| - 0.00057 19.9 3.3 0.0093 15.9 2.7 2.5 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_23 PF13476.6 gi|150398811|ref|YP_001322578.1| - 0.0011 19.5 4.9 0.0031 18.0 4.7 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|150398811|ref|YP_001322578.1| - 0.0011 19.4 0.0 0.0023 18.3 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain Ribosomal_S17 PF00366.20 gi|150398811|ref|YP_001322578.1| - 0.017 15.2 0.1 0.16 12.1 0.0 2.2 2 0 0 2 2 2 0 Ribosomal protein S17 AAA_22 PF13401.6 gi|150398811|ref|YP_001322578.1| - 0.019 15.2 0.3 0.047 14.0 0.3 1.8 1 1 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 gi|150398811|ref|YP_001322578.1| - 0.032 13.0 0.3 0.17 10.6 0.0 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein cobW PF02492.19 gi|150398811|ref|YP_001322578.1| - 0.033 13.8 0.0 0.082 12.5 0.0 1.7 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 gi|150398811|ref|YP_001322578.1| - 0.037 13.8 0.0 0.1 12.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|150398811|ref|YP_001322578.1| - 0.052 14.1 0.0 0.13 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|150398811|ref|YP_001322578.1| - 0.059 12.4 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_33 PF13671.6 gi|150398811|ref|YP_001322578.1| - 0.078 13.1 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|150398811|ref|YP_001322578.1| - 0.087 12.5 0.1 4.2 7.0 0.0 2.4 2 0 0 2 2 2 0 AAA domain DUF3987 PF13148.6 gi|150398811|ref|YP_001322578.1| - 0.23 10.4 0.0 0.37 9.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) SMC_N PF02463.19 gi|150398811|ref|YP_001322578.1| - 0.26 10.7 4.7 2.7 7.4 2.0 2.6 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain BPD_transp_1 PF00528.22 gi|150398812|ref|YP_001322579.1| - 4.6e-25 88.4 14.2 4.6e-25 88.4 14.2 2.5 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Pex24p PF06398.11 gi|150398812|ref|YP_001322579.1| - 7.7 5.4 11.1 11 4.9 11.1 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin OpuAC PF04069.12 gi|150398813|ref|YP_001322580.1| - 3.2e-64 217.0 0.0 3.6e-64 216.8 0.0 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Aminotran_3 PF00202.21 gi|150398814|ref|YP_001322581.1| - 3.2e-96 322.5 0.0 3.9e-96 322.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Na_H_Exchanger PF00999.21 gi|150398815|ref|YP_001322582.1| - 2.6e-52 177.9 50.1 3.3e-52 177.6 50.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CBS PF00571.28 gi|150398816|ref|YP_001322583.1| - 2.9e-17 62.8 0.4 2e-08 34.5 0.0 2.2 2 0 0 2 2 2 2 CBS domain Baculo_19 PF04798.12 gi|150398816|ref|YP_001322583.1| - 0.041 13.6 0.0 0.08 12.7 0.0 1.5 1 0 0 1 1 1 0 Baculovirus 19 kDa protein conserved region Acetyltransf_1 PF00583.25 gi|150398816|ref|YP_001322583.1| - 0.044 14.0 0.0 0.83 9.9 0.0 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) family Nitro_FeMo-Co PF02579.17 gi|150398817|ref|YP_001322584.1| - 1.1e-18 67.3 0.0 1.4e-18 67.0 0.0 1.0 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor AnfO_nitrog PF09582.10 gi|150398817|ref|YP_001322584.1| - 1.6e-07 30.9 0.1 2.8e-07 30.1 0.1 1.4 1 1 0 1 1 1 1 Iron only nitrogenase protein AnfO (AnfO_nitrog) Pox_D5 PF03288.16 gi|150398817|ref|YP_001322584.1| - 0.11 13.0 0.1 0.41 11.2 0.1 2.0 1 1 0 1 1 1 0 Poxvirus D5 protein-like Oxidored_nitro PF00148.19 gi|150398818|ref|YP_001322585.1| - 5.8e-130 433.6 0.0 6.5e-130 433.4 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Propep_M14 PF02244.16 gi|150398818|ref|YP_001322585.1| - 0.032 14.6 0.0 0.12 12.8 0.0 2.0 2 0 0 2 2 2 0 Carboxypeptidase activation peptide FG-GAP_2 PF14312.6 gi|150398818|ref|YP_001322585.1| - 0.061 13.6 0.2 0.3 11.4 0.0 2.1 2 0 0 2 2 2 0 FG-GAP repeat Oxidored_nitro PF00148.19 gi|150398819|ref|YP_001322586.1| - 1.1e-120 403.0 0.3 1.3e-120 402.8 0.3 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 gi|150398820|ref|YP_001322587.1| - 7.6e-122 406.9 0.0 8.6e-122 406.7 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase ThiF PF00899.21 gi|150398820|ref|YP_001322587.1| - 0.14 11.4 0.0 0.28 10.5 0.0 1.4 1 0 0 1 1 1 0 ThiF family Oxidored_nitro PF00148.19 gi|150398821|ref|YP_001322588.1| - 4.7e-118 394.4 0.0 5.4e-118 394.2 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase P-II PF00543.22 gi|150398822|ref|YP_001322589.1| - 5e-33 113.8 0.3 6.8e-33 113.3 0.3 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II P-II PF00543.22 gi|150398823|ref|YP_001322590.1| - 5.6e-31 107.2 1.0 6.3e-31 107.0 1.0 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II CdAMP_rec PF06153.11 gi|150398823|ref|YP_001322590.1| - 0.00042 20.5 1.6 0.0063 16.7 0.7 2.5 1 1 1 2 2 2 1 Cyclic-di-AMP receptor DLH PF01738.18 gi|150398823|ref|YP_001322590.1| - 0.15 11.6 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Dienelactone hydrolase family Fer4_NifH PF00142.18 gi|150398824|ref|YP_001322591.1| - 2.1e-128 427.5 3.4 2.4e-128 427.3 3.4 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|150398824|ref|YP_001322591.1| - 6.8e-09 35.9 0.0 1.1e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|150398824|ref|YP_001322591.1| - 6.4e-06 26.2 3.3 9.9e-06 25.6 0.1 2.4 3 0 0 3 3 3 1 AAA domain ParA PF10609.9 gi|150398824|ref|YP_001322591.1| - 0.00038 20.0 1.1 0.0031 17.0 1.1 2.2 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_24 PF13479.6 gi|150398824|ref|YP_001322591.1| - 0.011 15.5 0.1 0.018 14.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain ArsA_ATPase PF02374.15 gi|150398824|ref|YP_001322591.1| - 0.015 14.5 0.1 0.045 12.9 0.1 1.8 2 0 0 2 2 2 0 Anion-transporting ATPase RNA_helicase PF00910.22 gi|150398824|ref|YP_001322591.1| - 0.022 15.2 0.3 0.22 11.9 0.0 2.3 2 0 0 2 2 2 0 RNA helicase Pyridox_ox_2 PF12900.7 gi|150398825|ref|YP_001322592.1| - 7.5e-16 58.4 0.0 8.8e-16 58.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|150398825|ref|YP_001322592.1| - 0.0033 17.0 0.1 0.0042 16.7 0.1 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Grp7_allergen PF16984.5 gi|150398825|ref|YP_001322592.1| - 0.0046 17.0 0.1 0.0056 16.7 0.1 1.1 1 0 0 1 1 1 1 Group 7 allergen Putative_PNPOx PF01243.20 gi|150398825|ref|YP_001322592.1| - 0.019 15.2 0.0 0.024 14.8 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase Molybdopterin PF00384.22 gi|150398826|ref|YP_001322593.1| - 1.1e-18 67.4 0.0 5.9e-17 61.7 0.0 2.1 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Pneumo_matrix PF03393.16 gi|150398826|ref|YP_001322593.1| - 0.017 14.4 0.1 0.026 13.8 0.1 1.2 1 0 0 1 1 1 0 Pneumovirus matrix protein PikAIV_N PF18605.1 gi|150398826|ref|YP_001322593.1| - 0.16 11.6 0.1 0.29 10.8 0.1 1.3 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Pyr_redox_2 PF07992.14 gi|150398827|ref|YP_001322594.1| - 1.7e-20 73.4 0.0 7.8e-20 71.3 0.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4 PF00037.27 gi|150398827|ref|YP_001322594.1| - 4.9e-20 70.5 41.3 4.2e-06 26.3 2.9 5.0 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150398827|ref|YP_001322594.1| - 2.6e-15 56.7 34.1 3.3e-07 30.8 9.4 4.5 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150398827|ref|YP_001322594.1| - 6.7e-15 55.0 29.9 5.7e-09 36.0 7.2 3.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150398827|ref|YP_001322594.1| - 3.8e-14 52.5 32.5 1.5e-07 31.4 5.9 4.7 5 0 0 5 5 5 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150398827|ref|YP_001322594.1| - 8.5e-14 52.2 22.5 0.0034 18.3 0.2 5.6 5 0 0 5 5 5 4 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|150398827|ref|YP_001322594.1| - 6.4e-13 48.6 28.4 0.0001 22.3 10.5 4.7 4 1 1 5 5 5 4 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150398827|ref|YP_001322594.1| - 7.2e-10 38.4 45.6 0.00034 20.5 2.2 5.6 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150398827|ref|YP_001322594.1| - 8.6e-10 38.3 46.7 7.6e-05 22.6 3.2 5.5 6 0 0 6 6 5 4 4Fe-4S binding domain FAD_oxidored PF12831.7 gi|150398827|ref|YP_001322594.1| - 7.4e-06 25.6 0.4 1.3e-05 24.8 0.4 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|150398827|ref|YP_001322594.1| - 8.6e-06 25.1 0.8 1.3e-05 24.5 0.8 1.2 1 0 0 1 1 1 1 FAD binding domain Fer4_22 PF17179.4 gi|150398827|ref|YP_001322594.1| - 9.4e-06 26.4 17.2 0.035 15.0 0.3 4.8 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150398827|ref|YP_001322594.1| - 2.4e-05 24.7 32.5 0.0059 17.0 1.0 5.1 3 2 3 6 6 6 1 4Fe-4S dicluster domain NAD_binding_8 PF13450.6 gi|150398827|ref|YP_001322594.1| - 9.4e-05 22.6 0.0 0.00019 21.6 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|150398827|ref|YP_001322594.1| - 0.00014 21.1 0.2 0.0015 17.7 0.1 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A Fer4_17 PF13534.6 gi|150398827|ref|YP_001322594.1| - 0.00017 22.1 35.4 0.0025 18.3 10.1 5.1 3 2 4 7 7 7 6 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|150398827|ref|YP_001322594.1| - 0.00026 21.5 23.9 0.062 13.9 1.2 4.9 4 0 0 4 4 4 3 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|150398827|ref|YP_001322594.1| - 0.00027 21.6 22.8 0.092 13.5 1.0 4.9 3 1 1 4 4 4 3 4Fe-4S single cluster domain HI0933_like PF03486.14 gi|150398827|ref|YP_001322594.1| - 0.00096 18.0 0.5 0.0045 15.8 0.4 1.9 1 1 1 2 2 2 1 HI0933-like protein DAO PF01266.24 gi|150398827|ref|YP_001322594.1| - 0.0012 18.6 0.2 0.044 13.4 1.0 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Fer4_4 PF12800.7 gi|150398827|ref|YP_001322594.1| - 0.0015 18.9 1.3 0.0015 18.9 1.3 5.4 5 0 0 5 5 4 3 4Fe-4S binding domain Pyr_redox_3 PF13738.6 gi|150398827|ref|YP_001322594.1| - 0.015 14.6 0.2 0.1 11.8 0.2 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|150398827|ref|YP_001322594.1| - 0.045 13.0 0.0 0.15 11.4 0.0 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Amino_oxidase PF01593.24 gi|150398827|ref|YP_001322594.1| - 0.054 12.8 0.1 0.085 12.1 0.1 1.2 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Pyr_redox PF00070.27 gi|150398827|ref|YP_001322594.1| - 0.061 13.9 0.1 0.19 12.3 0.1 1.9 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|150398827|ref|YP_001322594.1| - 0.09 12.0 0.4 0.13 11.4 0.4 1.2 1 0 0 1 1 1 0 FAD binding domain Thi4 PF01946.17 gi|150398827|ref|YP_001322594.1| - 0.11 11.7 0.0 0.24 10.6 0.0 1.5 1 0 0 1 1 1 0 Thi4 family Fer4 PF00037.27 gi|150398828|ref|YP_001322595.1| - 3e-58 191.4 130.1 8.7e-07 28.5 3.1 12.1 12 0 0 12 12 12 12 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150398828|ref|YP_001322595.1| - 8.4e-51 170.4 87.1 1.1e-11 45.1 7.0 7.4 7 0 0 7 7 7 6 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150398828|ref|YP_001322595.1| - 3e-38 129.8 98.2 3.6e-06 27.0 9.8 8.5 4 2 6 10 10 10 10 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150398828|ref|YP_001322595.1| - 4.4e-38 127.8 124.2 7e-06 25.9 1.3 12.1 12 0 0 12 12 12 12 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150398828|ref|YP_001322595.1| - 2.7e-37 126.7 108.3 8.5e-09 35.4 9.8 8.9 4 3 5 9 9 9 9 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150398828|ref|YP_001322595.1| - 2.8e-34 117.8 101.3 0.00041 21.2 0.7 12.0 10 2 3 13 13 13 12 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|150398828|ref|YP_001322595.1| - 3.5e-34 114.8 116.8 0.00086 19.3 2.5 12.2 12 0 0 12 12 12 12 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150398828|ref|YP_001322595.1| - 2.5e-29 101.2 107.2 9.8e-07 28.8 10.3 8.9 4 3 6 10 10 10 10 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150398828|ref|YP_001322595.1| - 8.6e-24 83.8 95.2 5.3e-06 26.8 8.2 9.4 6 3 2 8 8 8 7 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150398828|ref|YP_001322595.1| - 3.5e-20 72.3 103.5 0.00026 21.5 8.6 11.1 6 3 4 10 10 10 9 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150398828|ref|YP_001322595.1| - 3.7e-19 67.6 112.1 0.0058 17.0 3.0 12.2 12 0 0 12 12 12 9 4Fe-4S binding domain Fer4_3 PF12798.7 gi|150398828|ref|YP_001322595.1| - 4.1e-13 49.3 142.4 0.0033 18.2 5.6 12.3 12 0 0 12 12 12 8 4Fe-4S binding domain Fer4_18 PF13746.6 gi|150398828|ref|YP_001322595.1| - 1.9e-07 31.3 99.8 5.3e-05 23.4 8.7 9.0 2 2 7 9 9 9 3 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150398828|ref|YP_001322595.1| - 2.2e-07 31.6 94.6 0.075 13.9 1.3 12.0 9 2 5 14 14 14 6 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|150398828|ref|YP_001322595.1| - 0.0033 17.9 113.6 0.14 12.7 2.2 12.2 11 1 1 12 12 12 7 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 gi|150398828|ref|YP_001322595.1| - 0.033 14.3 2.3 0.033 14.3 2.3 5.9 1 1 3 6 6 5 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_15 PF13459.6 gi|150398828|ref|YP_001322595.1| - 0.14 12.9 86.4 0.92 10.3 0.3 12.2 11 2 2 13 13 13 0 4Fe-4S single cluster domain NiFeSe_Hases PF00374.19 gi|150398829|ref|YP_001322596.1| - 2.6e-38 132.2 0.3 6.2e-24 84.8 0.0 3.0 1 1 2 3 3 3 3 Nickel-dependent hydrogenase Oxidored_q6 PF01058.22 gi|150398830|ref|YP_001322597.1| - 1.8e-35 121.6 0.1 3.2e-35 120.8 0.1 1.4 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit FlpD PF02662.16 gi|150398831|ref|YP_001322598.1| - 8.1e-53 177.6 0.0 9.1e-53 177.5 0.0 1.0 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit NiFeSe_Hases PF00374.19 gi|150398832|ref|YP_001322599.1| - 4.1e-30 105.2 10.6 7e-15 54.9 0.0 5.0 1 1 2 4 4 4 4 Nickel-dependent hydrogenase HycI PF01750.18 gi|150398833|ref|YP_001322600.1| - 3.5e-28 98.0 0.9 4.8e-28 97.6 0.9 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease Methyltransf_31 PF13847.6 gi|150398833|ref|YP_001322600.1| - 0.17 11.7 0.4 0.4 10.5 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Oxidored_q6 PF01058.22 gi|150398834|ref|YP_001322601.1| - 2.5e-29 101.7 0.1 2.5e-29 101.7 0.1 2.0 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.27 gi|150398834|ref|YP_001322601.1| - 1.7e-10 40.2 17.9 2.9e-07 30.0 2.5 3.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150398834|ref|YP_001322601.1| - 2.3e-07 30.8 10.9 2.3e-07 30.8 10.9 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150398834|ref|YP_001322601.1| - 9.2e-07 28.9 12.2 5.1e-06 26.5 9.7 2.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150398834|ref|YP_001322601.1| - 6.9e-06 26.5 15.0 6.7e-05 23.4 13.0 2.8 2 2 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150398834|ref|YP_001322601.1| - 8.1e-05 22.7 12.2 8.1e-05 22.7 12.2 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150398834|ref|YP_001322601.1| - 0.0013 18.7 1.9 0.0013 18.7 1.9 3.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150398834|ref|YP_001322601.1| - 0.0018 18.3 2.2 0.0018 18.3 2.2 3.2 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150398834|ref|YP_001322601.1| - 0.032 14.7 15.6 0.2 12.2 1.9 2.9 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150398834|ref|YP_001322601.1| - 0.061 14.1 1.1 0.061 14.1 1.1 3.5 3 1 1 4 4 3 0 4Fe-4S single cluster domain Fer4_16 PF13484.6 gi|150398834|ref|YP_001322601.1| - 0.086 13.8 1.6 0.086 13.8 1.6 2.9 3 0 0 3 3 2 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|150398834|ref|YP_001322601.1| - 0.23 12.0 19.3 0.32 11.6 3.2 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150398834|ref|YP_001322601.1| - 1.9 9.1 21.3 0.74 10.4 2.9 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150398834|ref|YP_001322601.1| - 7.6 7.4 18.1 4.8 8.1 5.9 3.0 3 0 0 3 3 3 0 4Fe-4S dicluster domain FrhB_FdhB_C PF04432.13 gi|150398835|ref|YP_001322602.1| - 1.8e-45 154.5 0.2 4.9e-45 153.1 0.1 1.7 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|150398835|ref|YP_001322602.1| - 5.3e-26 90.6 0.2 1.1e-25 89.6 0.2 1.6 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Flavodoxin_5 PF12724.7 gi|150398836|ref|YP_001322603.1| - 2.4e-29 102.4 0.0 2.7e-29 102.3 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|150398836|ref|YP_001322603.1| - 1.2e-07 32.0 0.0 1.4e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 gi|150398836|ref|YP_001322603.1| - 2e-07 30.9 1.7 2.4e-07 30.6 1.7 1.2 1 1 0 1 1 1 1 Flavodoxin domain EVE PF01878.18 gi|150398837|ref|YP_001322604.1| - 3.8e-24 85.3 1.3 4.2e-24 85.2 1.3 1.0 1 0 0 1 1 1 1 EVE domain Dev_Cell_Death PF10539.9 gi|150398837|ref|YP_001322604.1| - 0.088 12.7 0.1 0.13 12.1 0.1 1.4 1 1 0 1 1 1 0 Development and cell death domain N6_Mtase PF02384.16 gi|150398838|ref|YP_001322605.1| - 1.4e-112 376.0 0.3 2.2e-112 375.4 0.3 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|150398838|ref|YP_001322605.1| - 2.1e-22 80.2 1.8 2.1e-22 80.2 1.8 2.0 2 0 0 2 2 2 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|150398838|ref|YP_001322605.1| - 0.00048 19.9 0.0 0.023 14.4 0.0 2.4 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|150398838|ref|YP_001322605.1| - 0.00049 19.7 0.0 0.0011 18.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|150398838|ref|YP_001322605.1| - 0.0028 18.3 0.0 0.24 12.1 0.0 2.9 3 0 0 3 3 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|150398838|ref|YP_001322605.1| - 0.01 15.7 0.0 0.023 14.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain TolA_bind_tri PF16331.5 gi|150398838|ref|YP_001322605.1| - 0.039 14.0 0.7 0.24 11.5 0.1 2.2 2 0 0 2 2 2 0 TolA binding protein trimerisation Baculo_PEP_C PF04513.12 gi|150398838|ref|YP_001322605.1| - 0.041 13.9 0.7 0.041 13.9 0.7 2.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Eco57I PF07669.11 gi|150398838|ref|YP_001322605.1| - 0.044 14.3 0.2 14 6.3 0.2 2.8 2 0 0 2 2 2 0 Eco57I restriction-modification methylase Methyltransf_12 PF08242.12 gi|150398838|ref|YP_001322605.1| - 0.073 13.8 1.7 0.86 10.4 0.2 2.9 2 1 0 2 2 2 0 Methyltransferase domain Snapin_Pallidin PF14712.6 gi|150398838|ref|YP_001322605.1| - 0.1 13.0 0.9 0.4 11.1 0.1 2.2 2 0 0 2 2 2 0 Snapin/Pallidin Methyltransf_11 PF08241.12 gi|150398838|ref|YP_001322605.1| - 0.14 12.8 0.0 3 8.6 0.0 2.8 3 0 0 3 3 3 0 Methyltransferase domain Methylase_S PF01420.19 gi|150398839|ref|YP_001322606.1| - 5.2e-41 140.7 10.5 4.5e-21 75.8 3.2 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain DUF1126 PF06565.12 gi|150398839|ref|YP_001322606.1| - 0.0088 15.9 0.1 0.034 13.9 0.1 2.1 1 1 0 1 1 1 1 DUF1126 PH-like domain DUF1525 PF07511.11 gi|150398839|ref|YP_001322606.1| - 0.013 15.6 0.6 3.5 7.8 0.3 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1525) AlbA_2 PF04326.14 gi|150398840|ref|YP_001322607.1| - 5.9e-18 65.4 2.3 5.9e-18 65.4 2.3 2.5 2 0 0 2 2 2 1 Putative DNA-binding domain HATPase_c_4 PF13749.6 gi|150398840|ref|YP_001322607.1| - 1e-05 25.6 0.6 4.8e-05 23.4 0.0 2.5 3 0 0 3 3 3 1 Putative ATP-dependent DNA helicase recG C-terminal HTH_45 PF14947.6 gi|150398840|ref|YP_001322607.1| - 0.019 15.0 0.1 0.062 13.3 0.1 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix NIR_SIR_ferr PF03460.17 gi|150398840|ref|YP_001322607.1| - 0.086 12.7 0.1 12 5.8 0.1 2.5 2 0 0 2 2 2 0 Nitrite/Sulfite reductase ferredoxin-like half domain FAM176 PF14851.6 gi|150398840|ref|YP_001322607.1| - 0.86 9.3 3.9 15 5.2 0.0 2.5 2 0 0 2 2 2 0 FAM176 family EcoR124_C PF12008.8 gi|150398841|ref|YP_001322608.1| - 1.1e-68 231.7 32.2 1.1e-68 231.7 32.2 5.1 5 0 0 5 5 5 1 Type I restriction and modification enzyme - subunit R C terminal SWI2_SNF2 PF18766.1 gi|150398841|ref|YP_001322608.1| - 6.1e-56 189.6 2.8 6.1e-56 189.6 2.8 2.8 2 1 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|150398841|ref|YP_001322608.1| - 3.4e-41 141.3 12.3 3.4e-41 141.3 12.3 3.8 4 1 0 4 4 4 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|150398841|ref|YP_001322608.1| - 7.2e-33 114.0 1.4 7.2e-33 114.0 1.4 4.6 4 2 0 4 4 4 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|150398841|ref|YP_001322608.1| - 3.1e-08 33.6 0.5 1.1e-07 31.8 0.3 2.1 1 1 0 1 1 1 1 DEAD/DEAH box helicase Cdh1_DBD_1 PF18196.1 gi|150398841|ref|YP_001322608.1| - 0.0014 18.9 1.3 0.0014 18.9 1.3 3.8 3 1 0 4 4 4 1 Chromodomain helicase DNA-binding domain 1 CbiA PF01656.23 gi|150398841|ref|YP_001322608.1| - 0.059 13.4 0.0 7.3 6.7 0.0 3.2 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain PC4 PF02229.16 gi|150398842|ref|YP_001322609.1| - 6.9e-14 51.2 0.6 8.4e-14 51.0 0.6 1.1 1 0 0 1 1 1 1 Transcriptional Coactivator p15 (PC4) DUF1887 PF09002.11 gi|150398843|ref|YP_001322610.1| - 3.8e-07 29.1 0.5 4.6e-07 28.8 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1887) HTH_24 PF13412.6 gi|150398843|ref|YP_001322610.1| - 7.6e-05 22.2 0.0 0.00013 21.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|150398843|ref|YP_001322610.1| - 0.0023 17.9 0.0 0.0064 16.4 0.0 1.8 1 0 0 1 1 1 1 HTH domain Mga PF05043.13 gi|150398843|ref|YP_001322610.1| - 0.0034 17.9 0.1 0.006 17.1 0.1 1.4 1 0 0 1 1 1 1 Mga helix-turn-helix domain HTH_20 PF12840.7 gi|150398843|ref|YP_001322610.1| - 0.0043 17.1 0.0 0.007 16.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Cas_Cas02710 PF09670.10 gi|150398843|ref|YP_001322610.1| - 0.0045 15.8 0.1 0.0057 15.5 0.1 1.2 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) Cas_APE2256 PF09651.10 gi|150398843|ref|YP_001322610.1| - 0.0047 16.8 0.0 0.0069 16.3 0.0 1.4 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_APE2256) HTH_5 PF01022.20 gi|150398843|ref|YP_001322610.1| - 0.019 14.8 0.0 0.072 13.0 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Cas_DxTHG PF09455.10 gi|150398843|ref|YP_001322610.1| - 0.019 14.6 3.4 0.024 14.3 3.4 1.1 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family TrmB PF01978.19 gi|150398843|ref|YP_001322610.1| - 0.029 14.2 0.2 0.13 12.1 0.1 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_6 PF01418.17 gi|150398843|ref|YP_001322610.1| - 0.036 14.0 0.1 0.14 12.2 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family DDRGK PF09756.9 gi|150398843|ref|YP_001322610.1| - 0.04 13.5 0.4 0.06 12.9 0.4 1.3 1 0 0 1 1 1 0 DDRGK domain Hjc PF01870.18 gi|150398843|ref|YP_001322610.1| - 0.14 12.2 1.3 3.2 7.8 1.3 2.3 1 1 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) DUF370 PF04025.12 gi|150398843|ref|YP_001322610.1| - 0.16 12.1 1.7 0.43 10.7 0.1 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF370) UvrD-helicase PF00580.21 gi|150398844|ref|YP_001322611.1| - 3.8e-58 197.5 10.1 3.8e-58 197.5 10.1 3.8 2 2 0 2 2 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 gi|150398844|ref|YP_001322611.1| - 5.5e-43 147.7 14.0 5.5e-43 147.7 14.0 2.7 3 1 0 3 3 3 1 UvrD-like helicase C-terminal domain PDDEXK_1 PF12705.7 gi|150398844|ref|YP_001322611.1| - 1e-34 120.6 0.0 1.9e-34 119.7 0.0 1.5 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily AAA_19 PF13245.6 gi|150398844|ref|YP_001322611.1| - 1.8e-29 102.9 0.0 5.4e-29 101.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain UvrD_C_2 PF13538.6 gi|150398844|ref|YP_001322611.1| - 3.5e-11 42.8 0.1 8.7e-05 22.3 0.0 2.4 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain DUF2800 PF10926.8 gi|150398844|ref|YP_001322611.1| - 5.1e-07 29.3 0.0 9.2e-07 28.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2800) Viral_helicase1 PF01443.18 gi|150398844|ref|YP_001322611.1| - 1.8e-06 27.9 3.9 0.22 11.2 0.1 4.4 4 0 0 4 4 4 2 Viral (Superfamily 1) RNA helicase AAA_12 PF13087.6 gi|150398844|ref|YP_001322611.1| - 2.1e-06 27.5 5.8 0.0013 18.4 0.1 3.9 3 1 1 4 4 4 2 AAA domain AAA_30 PF13604.6 gi|150398844|ref|YP_001322611.1| - 2.4e-06 27.4 0.0 3.4e-05 23.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain Cas_Cas4 PF01930.17 gi|150398844|ref|YP_001322611.1| - 5e-06 26.7 0.1 5e-06 26.7 0.1 3.1 4 0 0 4 4 3 1 Domain of unknown function DUF83 AAA_11 PF13086.6 gi|150398844|ref|YP_001322611.1| - 6.8e-06 26.1 2.6 2e-05 24.5 0.1 2.8 2 1 0 2 2 2 1 AAA domain Terminase_6 PF03237.15 gi|150398844|ref|YP_001322611.1| - 8.4e-06 25.6 0.3 0.001 18.8 0.0 2.7 2 1 1 3 3 3 1 Terminase-like family DUF3799 PF12684.7 gi|150398844|ref|YP_001322611.1| - 0.0035 17.2 1.0 0.0035 17.2 1.0 2.2 2 0 0 2 2 2 1 PDDEXK-like domain of unknown function (DUF3799) ResIII PF04851.15 gi|150398844|ref|YP_001322611.1| - 0.012 15.6 0.1 0.012 15.6 0.1 4.2 4 2 2 6 6 6 0 Type III restriction enzyme, res subunit Dna2 PF08696.11 gi|150398844|ref|YP_001322611.1| - 0.043 13.6 0.0 0.043 13.6 0.0 3.3 3 1 0 3 3 3 0 DNA replication factor Dna2 MukB PF04310.12 gi|150398844|ref|YP_001322611.1| - 0.12 12.2 1.2 0.71 9.6 0.2 2.4 2 0 0 2 2 2 0 MukB N-terminal AAA_22 PF13401.6 gi|150398844|ref|YP_001322611.1| - 0.32 11.3 1.7 3 8.1 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_7 PF12775.7 gi|150398844|ref|YP_001322611.1| - 0.85 9.1 3.9 0.34 10.4 0.1 2.3 3 0 0 3 3 3 0 P-loop containing dynein motor region MTES_1575 PF18741.1 gi|150398846|ref|YP_001322613.1| - 5.1e-36 122.7 0.1 2.5e-35 120.5 0.1 2.3 2 0 0 2 2 2 1 REase_MTES_1575 DUF4011 PF13195.6 gi|150398846|ref|YP_001322613.1| - 3e-27 95.5 2.3 3e-27 95.5 2.3 3.7 4 1 0 4 4 4 1 Protein of unknown function (DUF4011) AAA_12 PF13087.6 gi|150398846|ref|YP_001322613.1| - 8.2e-17 61.5 0.1 8.2e-17 61.5 0.1 3.3 4 1 0 5 5 5 1 AAA domain AAA_11 PF13086.6 gi|150398846|ref|YP_001322613.1| - 6.9e-16 58.8 0.6 1.8e-06 27.9 0.3 3.2 2 1 0 2 2 2 2 AAA domain AAA_19 PF13245.6 gi|150398846|ref|YP_001322613.1| - 2.5e-07 31.1 0.0 0.00045 20.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|150398846|ref|YP_001322613.1| - 6.6e-06 26.0 0.0 0.0045 16.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain DUF559 PF04480.12 gi|150398846|ref|YP_001322613.1| - 0.00063 19.6 0.0 0.002 18.0 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF559) Viral_helicase1 PF01443.18 gi|150398846|ref|YP_001322613.1| - 0.0015 18.3 0.2 1.1 9.0 0.0 2.8 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA PF00004.29 gi|150398846|ref|YP_001322613.1| - 0.0081 16.6 0.1 0.38 11.2 0.0 3.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RAP PF08373.10 gi|150398846|ref|YP_001322613.1| - 0.021 14.9 2.2 0.062 13.4 0.3 3.0 2 0 0 2 2 1 0 RAP domain AAA_22 PF13401.6 gi|150398846|ref|YP_001322613.1| - 0.1 12.9 0.1 23 5.2 0.0 3.3 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|150398846|ref|YP_001322613.1| - 0.1 12.3 0.0 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein DASH_Dam1 PF08653.10 gi|150398846|ref|YP_001322613.1| - 1.3 8.8 5.8 4 7.3 0.0 4.5 3 1 1 4 4 4 0 DASH complex subunit Dam1 ResIII PF04851.15 gi|150398846|ref|YP_001322613.1| - 9.8 6.1 13.7 0.48 10.4 0.1 3.6 4 0 0 4 4 4 0 Type III restriction enzyme, res subunit Resolvase PF00239.21 gi|150398847|ref|YP_001322614.1| - 1.2e-44 151.9 0.3 1.6e-44 151.6 0.3 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_7 PF02796.15 gi|150398847|ref|YP_001322614.1| - 2.2e-09 37.2 0.5 2e-07 31.0 0.1 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_23 PF13384.6 gi|150398847|ref|YP_001322614.1| - 0.00021 21.0 0.1 0.00078 19.2 0.1 1.9 2 0 0 2 2 1 1 Homeodomain-like domain HTH_Tnp_1_2 PF13022.6 gi|150398847|ref|YP_001322614.1| - 0.0012 18.9 0.1 0.0027 17.8 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase HTH_11 PF08279.12 gi|150398847|ref|YP_001322614.1| - 0.0024 17.8 0.9 0.14 12.1 0.0 3.0 3 0 0 3 3 3 1 HTH domain TFA2_Winged_2 PF18121.1 gi|150398847|ref|YP_001322614.1| - 0.004 16.8 1.5 0.0097 15.6 0.1 2.3 3 0 0 3 3 3 1 TFA2 Winged helix domain 2 TetR_N PF00440.23 gi|150398847|ref|YP_001322614.1| - 0.0092 15.8 0.0 0.037 13.8 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_28 PF13518.6 gi|150398847|ref|YP_001322614.1| - 0.017 15.2 0.0 0.047 13.8 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|150398847|ref|YP_001322614.1| - 0.02 14.9 2.4 0.031 14.3 0.0 2.4 3 0 0 3 3 3 0 Winged helix-turn helix HTH_17 PF12728.7 gi|150398847|ref|YP_001322614.1| - 0.05 13.8 0.4 0.19 11.9 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_AraC PF00165.23 gi|150398847|ref|YP_001322614.1| - 0.07 13.3 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_22 PF13309.6 gi|150398847|ref|YP_001322614.1| - 0.07 13.2 0.7 0.96 9.6 0.2 2.4 2 0 0 2 2 2 0 HTH domain GP3_package PF16677.5 gi|150398847|ref|YP_001322614.1| - 0.073 13.2 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 DNA-packaging protein gp3 CDKN3 PF05706.12 gi|150398847|ref|YP_001322614.1| - 0.086 12.5 0.0 0.15 11.7 0.0 1.4 2 0 0 2 2 2 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Terminase_5 PF06056.12 gi|150398847|ref|YP_001322614.1| - 0.088 12.7 0.1 0.21 11.5 0.1 1.6 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) Phage_AlpA PF05930.12 gi|150398847|ref|YP_001322614.1| - 0.11 12.4 0.3 0.27 11.1 0.0 1.8 2 0 0 2 2 1 0 Prophage CP4-57 regulatory protein (AlpA) TPR_1 PF00515.28 gi|150398848|ref|YP_001322615.1| - 2.6e-49 163.1 47.7 1.6e-09 37.2 0.2 9.8 10 0 0 10 10 10 7 Tetratricopeptide repeat TPR_2 PF07719.17 gi|150398848|ref|YP_001322615.1| - 1.2e-44 146.8 29.6 8.3e-09 34.9 0.1 8.3 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_11 PF13414.6 gi|150398848|ref|YP_001322615.1| - 1e-32 111.5 27.4 2.7e-08 33.3 3.5 7.6 6 2 2 8 8 8 6 TPR repeat TPR_8 PF13181.6 gi|150398848|ref|YP_001322615.1| - 3.2e-32 108.0 25.1 9.9e-08 31.6 0.1 8.1 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_17 PF13431.6 gi|150398848|ref|YP_001322615.1| - 6.8e-23 79.4 32.7 0.00023 21.3 1.2 9.6 9 0 0 9 9 9 6 Tetratricopeptide repeat TPR_12 PF13424.6 gi|150398848|ref|YP_001322615.1| - 3.9e-22 78.3 9.1 3.5e-09 36.8 0.0 6.0 4 3 1 5 5 5 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|150398848|ref|YP_001322615.1| - 6.9e-22 76.3 0.0 3.6e-05 24.2 0.0 7.3 4 3 3 7 7 7 4 Tetratricopeptide repeat TPR_16 PF13432.6 gi|150398848|ref|YP_001322615.1| - 1.1e-20 74.0 0.1 2.7e-08 34.3 0.0 4.7 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|150398848|ref|YP_001322615.1| - 8e-20 69.4 7.0 0.0013 18.6 0.0 7.2 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_9 PF13371.6 gi|150398848|ref|YP_001322615.1| - 6.2e-17 61.5 0.0 0.00073 19.6 0.0 5.5 4 2 2 6 6 6 4 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|150398848|ref|YP_001322615.1| - 7.4e-13 48.3 25.5 0.00046 20.2 0.1 7.9 8 0 0 8 8 8 4 Fis1 C-terminal tetratricopeptide repeat TPR_19 PF14559.6 gi|150398848|ref|YP_001322615.1| - 2.2e-12 47.3 7.1 0.0031 18.0 0.0 5.4 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|150398848|ref|YP_001322615.1| - 1.6e-11 44.1 6.1 0.13 13.0 0.1 6.6 6 0 0 6 6 6 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|150398848|ref|YP_001322615.1| - 3e-11 43.4 14.0 0.00018 21.6 0.8 3.8 4 0 0 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 gi|150398848|ref|YP_001322615.1| - 1.2e-09 37.7 10.6 0.34 10.8 0.1 6.5 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_15 PF13429.6 gi|150398848|ref|YP_001322615.1| - 1.4e-07 31.0 0.1 0.31 10.2 0.0 5.3 4 2 1 5 5 5 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|150398848|ref|YP_001322615.1| - 3.2e-06 26.3 0.3 0.15 11.0 0.0 3.9 3 1 0 4 4 4 2 NMDA receptor-regulated protein 1 MIT PF04212.18 gi|150398848|ref|YP_001322615.1| - 0.0022 18.0 14.7 19 5.4 0.4 6.5 6 1 0 6 6 6 0 MIT (microtubule interacting and transport) domain Sel1 PF08238.12 gi|150398848|ref|YP_001322615.1| - 0.0041 17.8 6.4 0.091 13.5 0.1 4.5 4 1 0 4 4 4 1 Sel1 repeat IL12 PF03039.14 gi|150398848|ref|YP_001322615.1| - 0.02 14.3 0.7 0.091 12.1 0.1 2.2 1 1 1 2 2 2 0 Interleukin-12 alpha subunit NTS_2 PF15448.6 gi|150398848|ref|YP_001322615.1| - 0.038 14.4 0.1 0.19 12.1 0.1 2.3 1 0 0 1 1 1 0 N-terminal segments of P. falciparum erythrocyte membrane protein DUF627 PF04781.12 gi|150398848|ref|YP_001322615.1| - 0.051 13.6 0.2 2.8 8.0 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF627) HTH_Bact PF18768.1 gi|150398848|ref|YP_001322615.1| - 0.097 12.3 1.4 30 4.3 0.0 4.3 4 0 0 4 4 4 0 Helix-turn-helix bacterial domain DUF3856 PF12968.7 gi|150398848|ref|YP_001322615.1| - 0.14 12.2 2.2 7.9 6.5 0.0 4.1 4 2 1 5 5 5 0 Domain of Unknown Function (DUF3856) DUF5113 PF17140.4 gi|150398848|ref|YP_001322615.1| - 1.7 8.5 16.5 0.16 11.8 0.6 5.1 5 2 1 6 6 6 0 Domain of unknown function (DUF5113) DUF553 PF04473.12 gi|150398849|ref|YP_001322616.1| - 8.2e-28 96.9 3.9 2.4e-27 95.4 3.9 1.8 1 1 0 1 1 1 1 Transglutaminase-like domain Peptidase_C93 PF06035.11 gi|150398849|ref|YP_001322616.1| - 0.013 15.3 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP TPR_2 PF07719.17 gi|150398850|ref|YP_001322617.1| - 1.2e-16 59.4 38.5 0.0055 16.7 0.6 13.0 16 0 0 16 16 13 5 Tetratricopeptide repeat TPR_1 PF00515.28 gi|150398850|ref|YP_001322617.1| - 3.3e-14 52.0 53.1 7.1e-05 22.5 1.3 13.6 13 1 0 13 13 13 6 Tetratricopeptide repeat DnaJ PF00226.31 gi|150398850|ref|YP_001322617.1| - 4.3e-10 39.6 1.3 4.3e-10 39.6 1.3 5.5 5 0 0 5 5 5 1 DnaJ domain TPR_12 PF13424.6 gi|150398850|ref|YP_001322617.1| - 2e-09 37.6 11.0 0.077 13.3 0.0 7.7 7 1 0 7 7 6 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|150398850|ref|YP_001322617.1| - 6.4e-09 35.4 36.8 0.014 15.1 0.5 9.5 10 0 0 10 10 10 4 TPR repeat Fis1_TPR_C PF14853.6 gi|150398850|ref|YP_001322617.1| - 1.2e-08 34.8 13.2 0.65 10.1 0.2 7.7 6 1 0 6 6 6 2 Fis1 C-terminal tetratricopeptide repeat TPR_16 PF13432.6 gi|150398850|ref|YP_001322617.1| - 6.2e-06 26.8 1.4 0.97 10.1 0.0 6.8 8 0 0 8 8 7 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|150398850|ref|YP_001322617.1| - 8.8e-06 26.1 1.8 0.15 12.6 0.0 6.7 11 0 0 11 11 7 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|150398850|ref|YP_001322617.1| - 0.00016 21.6 58.9 0.23 11.8 0.9 14.2 16 0 0 16 16 14 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|150398850|ref|YP_001322617.1| - 0.00032 21.3 0.0 63 4.8 0.0 7.0 10 0 0 10 10 4 0 Tetratricopeptide repeat TPR_10 PF13374.6 gi|150398850|ref|YP_001322617.1| - 0.017 15.0 0.1 3.1 7.8 0.1 4.0 3 0 0 3 3 3 0 Tetratricopeptide repeat Sel1 PF08238.12 gi|150398850|ref|YP_001322617.1| - 0.04 14.6 0.4 0.59 10.9 0.1 3.0 2 0 0 2 2 2 0 Sel1 repeat DUF3775 PF12616.8 gi|150398850|ref|YP_001322617.1| - 0.087 12.9 0.1 0.33 11.0 0.0 2.1 2 0 0 2 2 1 0 Protein of unknown function (DUF3775) TPR_7 PF13176.6 gi|150398850|ref|YP_001322617.1| - 0.16 12.1 13.6 4 7.7 0.1 7.1 8 0 0 8 8 6 0 Tetratricopeptide repeat GIT1_C PF12205.8 gi|150398850|ref|YP_001322617.1| - 0.21 11.7 10.0 2.2 8.4 0.2 4.6 4 0 0 4 4 4 0 G protein-coupled receptor kinase-interacting protein 1 C term YfdX PF10938.8 gi|150398850|ref|YP_001322617.1| - 0.43 10.5 3.6 4.1 7.3 0.1 3.9 5 1 0 5 5 4 0 YfdX protein DUF3856 PF12968.7 gi|150398850|ref|YP_001322617.1| - 0.83 9.7 5.4 9.6 6.3 0.1 4.2 3 0 0 3 3 3 0 Domain of Unknown Function (DUF3856) DUF357 PF04010.13 gi|150398850|ref|YP_001322617.1| - 4 7.6 11.6 46 4.2 0.0 6.3 6 1 1 7 7 7 0 Protein of unknown function (DUF357) SHNi-TPR PF10516.9 gi|150398850|ref|YP_001322617.1| - 5.2 6.6 6.2 32 4.1 0.0 4.8 5 0 0 5 5 4 0 SHNi-TPR Tektin PF03148.14 gi|150398851|ref|YP_001322618.1| - 9.6e-05 21.3 5.4 9.6e-05 21.3 5.4 2.5 2 1 1 3 3 3 1 Tektin family GrpE PF01025.19 gi|150398851|ref|YP_001322618.1| - 0.0002 21.0 18.6 0.0002 21.0 18.6 4.0 1 1 1 2 2 1 1 GrpE DUF1664 PF07889.12 gi|150398851|ref|YP_001322618.1| - 0.0014 18.6 0.9 0.0014 18.6 0.9 3.1 2 1 1 3 3 3 1 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 gi|150398851|ref|YP_001322618.1| - 0.007 16.4 6.4 0.007 16.4 6.4 2.4 2 1 1 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus ApoLp-III PF07464.11 gi|150398851|ref|YP_001322618.1| - 0.0075 16.4 10.6 0.0075 16.4 10.6 2.4 2 1 0 2 2 2 1 Apolipophorin-III precursor (apoLp-III) Syntaxin-6_N PF09177.11 gi|150398851|ref|YP_001322618.1| - 0.014 15.9 3.9 0.014 15.9 3.9 2.9 2 1 0 2 2 2 0 Syntaxin 6, N-terminal DUF2489 PF10675.9 gi|150398851|ref|YP_001322618.1| - 0.016 15.2 0.7 0.016 15.2 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2489) DUF5618 PF18498.1 gi|150398851|ref|YP_001322618.1| - 0.05 13.8 3.1 0.073 13.3 0.5 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF5618) DUF3854 PF12965.7 gi|150398851|ref|YP_001322618.1| - 0.079 12.9 0.4 0.079 12.9 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3854) Tweety PF04906.13 gi|150398851|ref|YP_001322618.1| - 0.19 10.3 1.9 5.2 5.6 0.6 2.2 1 1 1 2 2 2 0 Tweety BKACE PF05853.12 gi|150398851|ref|YP_001322618.1| - 0.2 10.9 0.0 0.27 10.5 0.0 1.2 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme DUF4407 PF14362.6 gi|150398851|ref|YP_001322618.1| - 1.2 8.5 11.9 3.9 6.7 11.8 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF948 PF06103.11 gi|150398851|ref|YP_001322618.1| - 1.9 8.8 11.4 4 7.8 4.2 3.5 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF4011 PF13195.6 gi|150398851|ref|YP_001322618.1| - 2.2 8.2 15.3 0.021 14.7 3.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4011) YtxH PF12732.7 gi|150398851|ref|YP_001322618.1| - 2.5 8.7 5.1 1.9e+02 2.7 5.1 3.1 1 1 0 1 1 1 0 YtxH-like protein DUF1043 PF06295.12 gi|150398851|ref|YP_001322618.1| - 7.2 6.6 13.0 5.5 7.0 2.1 3.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1043) HSP70 PF00012.20 gi|150398852|ref|YP_001322619.1| - 5.4e-102 341.9 0.2 1.4e-94 317.5 0.0 2.0 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 gi|150398852|ref|YP_001322619.1| - 2e-22 79.5 0.4 5.5e-22 78.0 0.4 1.7 1 1 0 1 1 1 1 MreB/Mbl protein FtsA PF14450.6 gi|150398852|ref|YP_001322619.1| - 5.6e-05 23.5 0.1 0.78 10.2 0.0 3.6 2 1 0 2 2 2 2 Cell division protein FtsA StbA PF06406.11 gi|150398852|ref|YP_001322619.1| - 0.0018 17.6 1.3 0.025 13.8 0.0 2.6 2 1 0 3 3 3 1 StbA protein CPP1-like PF11833.8 gi|150398853|ref|YP_001322620.1| - 8.8 5.9 7.8 19 4.9 7.8 1.6 1 1 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Fic PF02661.18 gi|150398854|ref|YP_001322621.1| - 4.5e-21 75.5 0.0 2.9e-20 72.9 0.0 2.2 2 0 0 2 2 2 1 Fic/DOC family Fic_N PF13784.6 gi|150398854|ref|YP_001322621.1| - 7.5e-06 25.9 1.3 1.8e-05 24.6 0.3 2.1 2 1 1 3 3 3 1 Fic/DOC family N-terminal HTH_DeoR PF08220.12 gi|150398854|ref|YP_001322621.1| - 3.7e-05 23.4 0.0 0.0001 22.0 0.0 1.8 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain DUF4172 PF13776.6 gi|150398854|ref|YP_001322621.1| - 0.00045 20.5 0.5 0.0012 19.2 0.1 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4172) Penicillinase_R PF03965.16 gi|150398854|ref|YP_001322621.1| - 0.03 14.7 1.5 0.06 13.7 0.1 2.3 2 2 0 2 2 2 0 Penicillinase repressor DUF1854 PF08909.11 gi|150398854|ref|YP_001322621.1| - 0.076 12.8 1.0 0.24 11.2 1.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1854) MarR_2 PF12802.7 gi|150398854|ref|YP_001322621.1| - 0.14 12.1 0.0 0.3 11.0 0.0 1.6 1 0 0 1 1 1 0 MarR family AAA_14 PF13173.6 gi|150398855|ref|YP_001322622.1| - 1.1e-32 112.8 0.5 1.1e-32 112.8 0.5 2.3 3 0 0 3 3 3 1 AAA domain DUF4143 PF13635.6 gi|150398855|ref|YP_001322622.1| - 1.3e-10 41.5 1.4 2.7e-10 40.5 1.4 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) HTH_psq PF05225.16 gi|150398855|ref|YP_001322622.1| - 0.15 11.8 0.0 0.4 10.4 0.0 1.6 1 0 0 1 1 1 0 helix-turn-helix, Psq domain DUF2683 PF10884.8 gi|150398856|ref|YP_001322623.1| - 6.5e-06 26.3 1.8 6.8e-06 26.3 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) DUF2283 PF10049.9 gi|150398857|ref|YP_001322624.1| - 0.00059 20.0 3.5 0.00059 20.0 3.5 2.3 2 1 0 2 2 2 1 Protein of unknown function (DUF2283) FMN_bind PF04205.14 gi|150398857|ref|YP_001322624.1| - 0.038 14.6 0.1 0.05 14.2 0.1 1.3 1 0 0 1 1 1 0 FMN-binding domain DUF4258 PF14076.6 gi|150398858|ref|YP_001322625.1| - 0.00012 22.4 0.0 0.00019 21.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4258) Chordopox_A33R PF05966.12 gi|150398858|ref|YP_001322625.1| - 0.046 13.0 0.1 0.055 12.7 0.1 1.1 1 0 0 1 1 1 0 Chordopoxvirus A33R protein DUF4435 PF14491.6 gi|150398860|ref|YP_001322627.1| - 1e-12 48.4 6.6 2.6e-12 47.1 6.6 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF4435) AAA_15 PF13175.6 gi|150398861|ref|YP_001322628.1| - 2e-20 73.9 39.9 2.5e-20 73.5 39.9 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|150398861|ref|YP_001322628.1| - 6.2e-18 65.6 16.8 4e-17 63.0 16.8 2.0 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 gi|150398861|ref|YP_001322628.1| - 3.2e-07 30.9 0.2 0.00034 21.1 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_23 PF13476.6 gi|150398861|ref|YP_001322628.1| - 0.0003 21.4 25.5 0.0014 19.2 25.5 2.2 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|150398861|ref|YP_001322628.1| - 0.002 18.1 0.0 0.012 15.6 0.0 2.2 3 0 0 3 3 3 1 NACHT domain SMC_N PF02463.19 gi|150398861|ref|YP_001322628.1| - 0.0086 15.5 8.4 0.014 14.9 8.4 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|150398861|ref|YP_001322628.1| - 0.012 15.9 2.6 0.15 12.3 0.2 3.3 1 1 0 2 2 2 0 AAA domain RRF PF01765.19 gi|150398861|ref|YP_001322628.1| - 0.046 13.7 1.2 0.076 13.0 0.5 1.7 1 1 0 1 1 1 0 Ribosome recycling factor AAA_16 PF13191.6 gi|150398861|ref|YP_001322628.1| - 0.079 13.3 0.0 0.28 11.5 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 gi|150398861|ref|YP_001322628.1| - 0.093 12.8 4.0 0.23 11.5 0.8 2.8 2 1 0 2 2 2 0 AAA domain DUF4313 PF14190.6 gi|150398861|ref|YP_001322628.1| - 0.26 11.3 4.2 0.29 11.1 0.0 3.0 3 1 1 4 4 4 0 Domain of unknown function (DUF4313) AAA PF00004.29 gi|150398861|ref|YP_001322628.1| - 0.31 11.5 2.4 3.6 8.0 0.1 3.0 2 1 1 3 3 3 0 ATPase family associated with various cellular activities (AAA) DUF3692 PF12469.8 gi|150398864|ref|YP_001322631.1| - 6.8e-14 52.0 0.0 2.1e-13 50.4 0.0 1.8 2 0 0 2 2 2 1 CRISPR-associated protein mCpol PF18182.1 gi|150398864|ref|YP_001322631.1| - 3.8e-06 27.2 2.8 4.8e-06 26.9 0.0 2.5 3 0 0 3 3 3 1 minimal CRISPR polymerase domain Cas_Cmr3 PF09700.10 gi|150398865|ref|YP_001322632.1| - 2.2e-16 60.3 0.0 1.6e-07 31.1 0.0 2.1 1 1 1 2 2 2 2 CRISPR-associated protein (Cas_Cmr3) RAMPs PF03787.15 gi|150398866|ref|YP_001322633.1| - 4e-22 79.3 3.9 1.4e-20 74.3 3.9 2.0 1 1 0 1 1 1 1 RAMP superfamily Cas_Cmr5 PF09701.10 gi|150398867|ref|YP_001322634.1| - 5e-11 43.0 0.0 6.1e-11 42.7 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cmr5) RAMPs PF03787.15 gi|150398868|ref|YP_001322635.1| - 4.8e-12 46.4 5.1 4.8e-12 46.4 5.1 2.3 2 1 0 2 2 2 1 RAMP superfamily Med4 PF10018.9 gi|150398868|ref|YP_001322635.1| - 0.055 13.1 0.6 0.055 13.1 0.6 2.0 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 CorA PF01544.18 gi|150398869|ref|YP_001322636.1| - 3.3e-09 36.5 0.7 8e-09 35.2 0.7 1.6 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Integrin_B_tail PF07965.12 gi|150398869|ref|YP_001322636.1| - 0.63 10.6 2.7 0.66 10.5 0.5 2.1 2 0 0 2 2 2 0 Integrin beta tail domain ERGIC_N PF13850.6 gi|150398869|ref|YP_001322636.1| - 6.4 7.2 8.8 4.5 7.7 1.3 3.5 3 1 1 4 4 4 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) GRDB PF07355.12 gi|150398870|ref|YP_001322637.1| - 0.044 13.0 0.3 0.067 12.4 0.3 1.2 1 0 0 1 1 1 0 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) HeH PF12949.7 gi|150398870|ref|YP_001322637.1| - 0.11 12.3 0.1 0.43 10.3 0.0 2.0 2 0 0 2 2 2 0 HeH/LEM domain Cas6b_C PF17262.2 gi|150398871|ref|YP_001322638.1| - 6.1e-41 139.1 0.8 9.9e-41 138.4 0.4 1.5 2 0 0 2 2 2 1 Cas6b C-terminal domain Cas6b_N PF17955.1 gi|150398871|ref|YP_001322638.1| - 8.4e-27 93.3 0.3 1.6e-26 92.4 0.3 1.4 1 0 0 1 1 1 1 Cas6b N-terminal domain Cas_Cas1 PF01867.16 gi|150398872|ref|YP_001322639.1| - 2.1e-70 237.1 0.2 2.4e-70 236.9 0.2 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 HGD-D PF06050.13 gi|150398872|ref|YP_001322639.1| - 0.1 12.4 0.2 0.17 11.6 0.2 1.4 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component Ribosomal_S15 PF00312.22 gi|150398872|ref|YP_001322639.1| - 0.13 12.4 0.7 0.27 11.4 0.1 1.8 2 0 0 2 2 2 0 Ribosomal protein S15 CRISPR_Cas2 PF09827.9 gi|150398873|ref|YP_001322640.1| - 2.2e-18 66.2 1.3 2.6e-18 66.0 1.3 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Pox_A28 PF04584.14 gi|150398873|ref|YP_001322640.1| - 0.043 14.0 0.2 0.044 14.0 0.2 1.1 1 0 0 1 1 1 0 Poxvirus A28 family AAA_15 PF13175.6 gi|150398874|ref|YP_001322641.1| - 5.4e-22 79.0 23.8 1.7e-21 77.4 23.8 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|150398874|ref|YP_001322641.1| - 3.4e-19 69.8 2.3 2.6e-10 40.6 0.1 2.5 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|150398874|ref|YP_001322641.1| - 1.5e-05 25.6 2.3 1.5e-05 25.6 2.3 2.2 1 1 1 2 2 2 1 AAA domain SMC_N PF02463.19 gi|150398874|ref|YP_001322641.1| - 0.0046 16.4 0.6 0.0094 15.4 0.2 1.7 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|150398874|ref|YP_001322641.1| - 0.031 14.0 0.1 0.07 12.9 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF2813 PF11398.8 gi|150398874|ref|YP_001322641.1| - 0.054 12.8 0.1 0.39 9.9 0.0 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2813) ABC_tran PF00005.27 gi|150398874|ref|YP_001322641.1| - 0.15 12.6 0.0 0.4 11.2 0.0 1.7 1 0 0 1 1 1 0 ABC transporter Pribosyltran PF00156.27 gi|150398876|ref|YP_001322643.1| - 0.021 14.3 0.0 0.039 13.5 0.0 1.6 1 1 0 1 1 1 0 Phosphoribosyl transferase domain zf-ribbon_3 PF13248.6 gi|150398877|ref|YP_001322644.1| - 1.6e-10 40.0 20.2 2.4e-05 23.6 1.3 3.3 3 0 0 3 3 3 3 zinc-ribbon domain DZR PF12773.7 gi|150398877|ref|YP_001322644.1| - 2e-08 34.1 20.9 0.0002 21.3 14.2 2.3 1 1 1 2 2 2 2 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|150398877|ref|YP_001322644.1| - 2.4e-07 30.2 28.0 1.5e-06 27.7 3.9 4.6 4 1 1 5 5 5 2 zinc-ribbon domain zinc-ribbons_6 PF07191.12 gi|150398877|ref|YP_001322644.1| - 1.2e-06 28.4 22.2 0.0015 18.5 8.9 2.2 1 1 1 2 2 2 2 zinc-ribbons Zn-ribbon_8 PF09723.10 gi|150398877|ref|YP_001322644.1| - 0.00015 21.8 28.5 0.02 15.0 1.7 4.2 1 1 3 4 4 4 3 Zinc ribbon domain UPF0547 PF10571.9 gi|150398877|ref|YP_001322644.1| - 0.00016 21.6 12.7 0.0023 18.0 2.4 3.9 3 1 0 3 3 3 2 Uncharacterised protein family UPF0547 Ribosomal_L32p PF01783.23 gi|150398877|ref|YP_001322644.1| - 0.0078 16.4 18.3 0.33 11.2 3.3 3.2 1 1 2 3 3 3 2 Ribosomal L32p protein family zinc_ribbon_15 PF17032.5 gi|150398877|ref|YP_001322644.1| - 0.0096 16.7 27.0 13 6.6 27.0 3.0 1 1 0 1 1 1 0 zinc-ribbon family HypA PF01155.19 gi|150398877|ref|YP_001322644.1| - 0.01 15.8 25.8 0.024 14.7 3.3 3.6 1 1 3 4 4 4 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ZZ PF00569.17 gi|150398877|ref|YP_001322644.1| - 0.027 14.3 13.1 0.027 14.3 13.1 3.5 2 1 2 4 4 4 0 Zinc finger, ZZ type zf-Di19 PF05605.12 gi|150398877|ref|YP_001322644.1| - 0.028 14.7 20.8 0.073 13.4 6.9 2.4 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DUF35_N PF12172.8 gi|150398877|ref|YP_001322644.1| - 0.032 14.1 2.3 0.032 14.1 2.3 4.7 5 0 0 5 5 5 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-UDP PF14569.6 gi|150398877|ref|YP_001322644.1| - 0.033 14.3 4.2 0.033 14.3 4.2 3.4 1 1 2 3 3 3 0 Zinc-binding RING-finger PolC_DP2 PF03833.13 gi|150398877|ref|YP_001322644.1| - 0.32 8.8 17.5 0.063 11.1 12.4 1.8 1 1 1 2 2 2 0 DNA polymerase II large subunit DP2 Rubredoxin_2 PF18073.1 gi|150398877|ref|YP_001322644.1| - 0.69 9.7 35.4 1.7 8.5 1.7 5.8 4 2 0 4 4 4 0 Rubredoxin metal binding domain TF_Zn_Ribbon PF08271.12 gi|150398877|ref|YP_001322644.1| - 0.78 9.3 28.3 0.1 12.1 4.8 4.0 2 2 1 3 3 3 0 TFIIB zinc-binding DUF2614 PF11023.8 gi|150398877|ref|YP_001322644.1| - 2.8 8.0 13.2 5 7.2 0.4 3.0 1 1 2 3 3 3 0 Zinc-ribbon containing domain zf-C4_Topoisom PF01396.19 gi|150398877|ref|YP_001322644.1| - 2.8 7.8 21.8 2.8 7.8 0.2 5.4 6 0 0 6 6 6 0 Topoisomerase DNA binding C4 zinc finger OrfB_Zn_ribbon PF07282.11 gi|150398877|ref|YP_001322644.1| - 3.1 7.8 26.2 1.6 8.7 3.2 3.7 1 1 1 2 2 2 0 Putative transposase DNA-binding domain NOB1_Zn_bind PF08772.11 gi|150398877|ref|YP_001322644.1| - 3.2 8.0 26.2 2.7 8.2 2.8 4.0 2 2 2 4 4 4 0 Nin one binding (NOB1) Zn-ribbon like DUF1451 PF07295.11 gi|150398877|ref|YP_001322644.1| - 3.2 7.8 20.4 0.13 12.3 4.4 3.0 1 1 2 3 3 3 0 Zinc-ribbon containing domain zf-C3H2C3 PF17122.5 gi|150398877|ref|YP_001322644.1| - 3.4 7.8 27.7 0.16 12.1 4.4 4.8 4 1 1 5 5 5 0 Zinc-finger Cys_rich_KTR PF14205.6 gi|150398877|ref|YP_001322644.1| - 3.4 7.5 21.1 39 4.1 5.1 4.0 1 1 2 3 3 3 0 Cysteine-rich KTR tRNA-synt_1g PF09334.11 gi|150398877|ref|YP_001322644.1| - 4.3 6.0 15.4 0.33 9.6 4.4 2.2 1 1 1 2 2 2 0 tRNA synthetases class I (M) DUF2089 PF09862.9 gi|150398877|ref|YP_001322644.1| - 5.4 7.1 8.7 8.7 6.4 0.8 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2089) RecR PF02132.15 gi|150398877|ref|YP_001322644.1| - 5.7 6.6 25.5 0.43 10.2 2.0 3.8 3 1 0 3 3 3 0 RecR protein Pribosyltran PF00156.27 gi|150398879|ref|YP_001322646.1| - 0.019 14.5 0.0 0.026 14.0 0.0 1.4 1 1 0 1 1 1 0 Phosphoribosyl transferase domain DNA_processg_A PF02481.15 gi|150398880|ref|YP_001322647.1| - 6.6e-51 172.5 0.0 9.2e-51 172.1 0.0 1.1 1 0 0 1 1 1 1 DNA recombination-mediator protein A VPS11_C PF12451.8 gi|150398880|ref|YP_001322647.1| - 0.15 12.3 0.1 5.1 7.4 0.1 2.7 2 0 0 2 2 2 0 Vacuolar protein sorting protein 11 C terminal VWA_2 PF13519.6 gi|150398881|ref|YP_001322648.1| - 1.4e-13 51.4 0.0 2.6e-13 50.5 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|150398881|ref|YP_001322648.1| - 4.1e-07 30.4 0.5 7.7e-07 29.5 0.5 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|150398881|ref|YP_001322648.1| - 0.017 14.5 0.0 0.068 12.5 0.0 1.8 1 1 0 1 1 1 0 VWA domain containing CoxE-like protein AAA_lid_2 PF17863.1 gi|150398882|ref|YP_001322649.1| - 5.9e-17 61.3 0.0 8.8e-17 60.7 0.0 1.3 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 gi|150398882|ref|YP_001322649.1| - 2.7e-14 53.1 0.0 1.5e-06 27.7 0.0 2.6 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|150398882|ref|YP_001322649.1| - 3.4e-11 43.3 0.0 8.8e-06 25.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|150398882|ref|YP_001322649.1| - 3.9e-05 22.8 0.0 0.042 12.9 0.0 3.0 2 1 0 2 2 2 2 MCM P-loop domain AAA_16 PF13191.6 gi|150398882|ref|YP_001322649.1| - 5.5e-05 23.6 0.1 0.00023 21.6 0.0 2.1 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|150398882|ref|YP_001322649.1| - 6.8e-05 22.5 0.0 0.00018 21.2 0.0 1.7 2 0 0 2 2 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|150398882|ref|YP_001322649.1| - 0.0026 18.3 0.1 0.05 14.1 0.0 2.4 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 gi|150398882|ref|YP_001322649.1| - 0.0047 16.1 0.1 0.037 13.2 0.0 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 gi|150398882|ref|YP_001322649.1| - 0.0063 16.8 0.1 0.027 14.7 0.1 2.1 1 1 0 1 1 1 1 AAA domain Phage_hub_GP28 PF11110.8 gi|150398882|ref|YP_001322649.1| - 0.0064 16.4 0.2 0.014 15.3 0.1 1.6 1 1 0 1 1 1 1 Baseplate hub distal subunit AAA_23 PF13476.6 gi|150398882|ref|YP_001322649.1| - 0.0067 16.9 4.8 0.011 16.2 0.0 2.3 2 1 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 gi|150398882|ref|YP_001322649.1| - 0.011 15.5 0.0 5.2 6.7 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain ABC_tran PF00005.27 gi|150398882|ref|YP_001322649.1| - 0.032 14.8 0.2 0.16 12.5 0.1 2.1 2 1 0 2 2 2 0 ABC transporter TsaE PF02367.17 gi|150398882|ref|YP_001322649.1| - 0.046 13.7 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF1882 PF08966.11 gi|150398882|ref|YP_001322649.1| - 0.049 13.9 0.1 0.13 12.6 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1882) AAA_6 PF12774.7 gi|150398882|ref|YP_001322649.1| - 0.059 12.3 0.2 0.28 10.1 0.0 1.9 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region AAA PF00004.29 gi|150398882|ref|YP_001322649.1| - 0.065 13.7 0.0 0.96 9.9 0.0 2.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|150398882|ref|YP_001322649.1| - 0.099 12.1 0.0 0.64 9.5 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region NACHT PF05729.12 gi|150398882|ref|YP_001322649.1| - 0.11 12.4 0.0 0.3 11.0 0.0 1.7 1 0 0 1 1 1 0 NACHT domain CobN-Mg_chel PF02514.16 gi|150398883|ref|YP_001322650.1| - 0 1118.5 0.0 0 1118.3 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase CARD PF00619.21 gi|150398883|ref|YP_001322650.1| - 0.0087 16.1 0.1 0.46 10.5 0.1 2.8 2 0 0 2 2 2 1 Caspase recruitment domain Sod_Fe_N PF00081.22 gi|150398883|ref|YP_001322650.1| - 0.027 14.9 0.3 0.73 10.3 0.1 2.8 2 0 0 2 2 2 0 Iron/manganese superoxide dismutases, alpha-hairpin domain DUF5082 PF16888.5 gi|150398883|ref|YP_001322650.1| - 0.04 14.2 1.7 0.2 12.0 1.7 2.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) ParB PF08775.10 gi|150398883|ref|YP_001322650.1| - 0.17 12.3 5.6 0.046 14.2 0.9 2.4 2 0 0 2 2 2 0 ParB family Sec5 PF15469.6 gi|150398883|ref|YP_001322650.1| - 1.4 8.7 8.1 0.73 9.6 0.1 3.7 3 0 0 3 3 3 0 Exocyst complex component Sec5 ABC_tran PF00005.27 gi|150398884|ref|YP_001322651.1| - 7.9e-27 94.4 0.0 1.3e-26 93.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|150398884|ref|YP_001322651.1| - 1.2e-10 41.7 0.5 0.00019 21.3 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|150398884|ref|YP_001322651.1| - 3e-08 33.8 1.5 2.2e-07 31.0 1.5 2.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|150398884|ref|YP_001322651.1| - 1.8e-07 31.2 0.4 1.8e-05 24.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|150398884|ref|YP_001322651.1| - 7.7e-07 28.8 0.2 1.7e-06 27.6 0.2 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|150398884|ref|YP_001322651.1| - 2.2e-06 27.3 0.0 4.4e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|150398884|ref|YP_001322651.1| - 2.8e-05 24.6 0.0 0.00042 20.7 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|150398884|ref|YP_001322651.1| - 3e-05 24.3 0.4 0.00023 21.4 0.4 2.2 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|150398884|ref|YP_001322651.1| - 0.0001 22.3 0.7 0.003 17.5 0.0 2.5 1 1 1 2 2 2 1 Rad17 P-loop domain AAA_23 PF13476.6 gi|150398884|ref|YP_001322651.1| - 0.00016 22.2 0.6 0.0005 20.6 0.6 2.1 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|150398884|ref|YP_001322651.1| - 0.00019 21.4 1.8 0.00032 20.7 1.0 2.0 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA PF00004.29 gi|150398884|ref|YP_001322651.1| - 0.00029 21.3 1.9 0.0035 17.8 1.9 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|150398884|ref|YP_001322651.1| - 0.00065 19.6 0.5 0.0022 17.9 0.0 2.2 2 1 0 2 2 2 1 RsgA GTPase AAA_5 PF07728.14 gi|150398884|ref|YP_001322651.1| - 0.00091 19.2 0.0 0.01 15.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 gi|150398884|ref|YP_001322651.1| - 0.0046 17.3 0.1 0.014 15.8 0.0 1.8 2 0 0 2 2 1 1 RNA helicase NACHT PF05729.12 gi|150398884|ref|YP_001322651.1| - 0.0052 16.7 0.1 0.013 15.4 0.0 1.7 2 0 0 2 2 2 1 NACHT domain AAA_18 PF13238.6 gi|150398884|ref|YP_001322651.1| - 0.0077 16.8 0.2 0.52 10.9 0.0 2.7 3 1 0 3 3 3 1 AAA domain AAA_24 PF13479.6 gi|150398884|ref|YP_001322651.1| - 0.014 15.1 0.0 0.027 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|150398884|ref|YP_001322651.1| - 0.029 14.1 0.1 0.23 11.2 0.0 2.4 3 0 0 3 3 3 0 IstB-like ATP binding protein T2SSE PF00437.20 gi|150398884|ref|YP_001322651.1| - 0.035 13.2 0.2 0.17 10.9 0.1 2.0 2 0 0 2 2 2 0 Type II/IV secretion system protein Mg_chelatase PF01078.21 gi|150398884|ref|YP_001322651.1| - 0.036 13.4 0.0 0.071 12.5 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NB-ARC PF00931.22 gi|150398884|ref|YP_001322651.1| - 0.037 13.2 0.0 0.14 11.3 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_30 PF13604.6 gi|150398884|ref|YP_001322651.1| - 0.045 13.5 0.0 0.13 12.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|150398884|ref|YP_001322651.1| - 0.049 13.8 0.0 0.099 12.8 0.0 1.7 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|150398884|ref|YP_001322651.1| - 0.07 12.4 0.1 0.59 9.4 0.0 2.2 2 1 0 2 2 2 0 Zeta toxin AAA_27 PF13514.6 gi|150398884|ref|YP_001322651.1| - 0.087 12.4 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 gi|150398884|ref|YP_001322651.1| - 0.088 12.5 0.0 0.15 11.7 0.0 1.4 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain MMR_HSR1 PF01926.23 gi|150398884|ref|YP_001322651.1| - 0.096 12.8 1.0 0.27 11.3 1.0 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 gi|150398884|ref|YP_001322651.1| - 0.12 12.3 3.0 0.3 11.0 0.1 2.7 3 1 0 3 3 2 0 NTPase AAA_19 PF13245.6 gi|150398884|ref|YP_001322651.1| - 0.17 12.2 1.0 0.7 10.2 0.3 2.4 2 1 0 2 2 2 0 AAA domain FecCD PF01032.18 gi|150398885|ref|YP_001322652.1| - 7.8e-57 192.6 35.9 1.7e-56 191.5 35.9 1.5 1 1 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|150398885|ref|YP_001322652.1| - 3.3e-07 30.1 21.0 3.3e-07 30.1 21.0 2.4 2 1 0 2 2 2 1 ABC 3 transport family FecCD PF01032.18 gi|150398886|ref|YP_001322653.1| - 9.2e-62 208.8 29.5 1.1e-61 208.5 29.5 1.0 1 0 0 1 1 1 1 FecCD transport family Peripla_BP_2 PF01497.18 gi|150398887|ref|YP_001322654.1| - 9.7e-17 61.3 0.4 1.3e-16 60.9 0.4 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Dockerin_1 PF00404.18 gi|150398887|ref|YP_001322654.1| - 0.0075 16.4 9.1 0.053 13.7 9.0 2.2 1 1 0 1 1 1 1 Dockerin type I domain EF-hand_1 PF00036.32 gi|150398887|ref|YP_001322654.1| - 0.012 15.1 0.6 0.87 9.3 0.1 3.0 2 0 0 2 2 2 0 EF hand Cohesin PF00963.18 gi|150398888|ref|YP_001322655.1| - 2.5e-08 34.2 12.2 2.8e-08 34.1 0.8 3.5 2 1 1 3 3 3 2 Cohesin domain PKD PF00801.20 gi|150398888|ref|YP_001322655.1| - 0.00041 20.1 0.4 0.0015 18.3 0.1 2.1 2 0 0 2 2 2 1 PKD domain Tafi-CsgC PF10610.9 gi|150398888|ref|YP_001322655.1| - 0.048 13.9 0.0 3.2 8.0 0.0 3.2 3 0 0 3 3 3 0 Thin aggregative fimbriae synthesis protein Lamp PF01299.17 gi|150398889|ref|YP_001322656.1| - 0.029 14.2 0.7 0.068 13.0 0.2 1.7 2 0 0 2 2 2 0 Lysosome-associated membrane glycoprotein (Lamp) Cohesin PF00963.18 gi|150398890|ref|YP_001322657.1| - 0.00055 20.2 0.8 0.00078 19.7 0.8 1.2 1 0 0 1 1 1 1 Cohesin domain Cohesin PF00963.18 gi|150398891|ref|YP_001322658.1| - 1.8e-15 57.4 19.6 5.7e-09 36.3 2.6 3.6 3 0 0 3 3 3 2 Cohesin domain S_layer_C PF05124.12 gi|150398891|ref|YP_001322658.1| - 4.8e-13 49.6 1.3 4.8e-13 49.6 1.3 2.9 3 1 0 3 3 3 1 S-layer like family, C-terminal region CARDB PF07705.11 gi|150398891|ref|YP_001322658.1| - 6.5e-09 36.0 2.9 6.5e-09 36.0 2.9 4.2 5 0 0 5 5 5 1 CARDB Inhibitor_I42 PF09394.10 gi|150398891|ref|YP_001322658.1| - 0.048 14.1 0.1 1.9 9.0 0.0 2.7 2 1 0 2 2 2 0 Chagasin family peptidase inhibitor I42 MarR PF01047.22 gi|150398892|ref|YP_001322659.1| - 2e-12 46.8 0.2 8.5e-12 44.8 0.3 2.0 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|150398892|ref|YP_001322659.1| - 7.2e-11 42.4 0.3 1.3e-10 41.6 0.3 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|150398892|ref|YP_001322659.1| - 4.8e-08 32.8 0.0 6.9e-08 32.3 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|150398892|ref|YP_001322659.1| - 4.3e-06 26.8 1.2 9.3e-06 25.7 1.1 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|150398892|ref|YP_001322659.1| - 8.1e-06 25.9 0.6 8.1e-06 25.9 0.6 2.2 2 1 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.10 gi|150398892|ref|YP_001322659.1| - 2.5e-05 24.0 0.0 4.1e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|150398892|ref|YP_001322659.1| - 0.00017 21.4 2.3 0.0012 18.7 0.3 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|150398892|ref|YP_001322659.1| - 0.0023 17.4 0.2 0.0075 15.8 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|150398892|ref|YP_001322659.1| - 0.0025 17.8 0.1 0.0064 16.4 0.1 1.9 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain Penicillinase_R PF03965.16 gi|150398892|ref|YP_001322659.1| - 0.0025 18.2 1.0 0.051 13.9 0.5 2.3 2 0 0 2 2 2 1 Penicillinase repressor DUF3116 PF11313.8 gi|150398892|ref|YP_001322659.1| - 0.0035 17.2 1.9 0.0036 17.1 0.5 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF3116) LexA_DNA_bind PF01726.16 gi|150398892|ref|YP_001322659.1| - 0.005 16.6 0.0 0.011 15.4 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain HTH_36 PF13730.6 gi|150398892|ref|YP_001322659.1| - 0.0071 16.3 0.4 0.031 14.2 0.2 2.3 2 1 0 2 2 2 1 Helix-turn-helix domain HxlR PF01638.17 gi|150398892|ref|YP_001322659.1| - 0.0077 16.1 0.4 0.017 15.0 0.4 1.6 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MqsR_toxin PF15723.5 gi|150398892|ref|YP_001322659.1| - 0.015 15.7 0.8 0.17 12.2 0.1 2.7 1 1 2 3 3 3 0 Motility quorum-sensing regulator, toxin of MqsA WIYLD PF10440.9 gi|150398892|ref|YP_001322659.1| - 0.024 14.5 2.7 3.9 7.4 0.2 3.0 3 0 0 3 3 3 0 Ubiquitin-binding WIYLD domain HTH_38 PF13936.6 gi|150398892|ref|YP_001322659.1| - 0.041 13.7 0.2 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain DUF1421 PF07223.11 gi|150398892|ref|YP_001322659.1| - 0.11 12.3 0.0 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 UBA-like domain (DUF1421) HTH_22 PF13309.6 gi|150398892|ref|YP_001322659.1| - 0.17 12.0 4.1 7.4 6.7 0.4 3.7 2 1 2 4 4 4 0 HTH domain MCPsignal PF00015.21 gi|150398893|ref|YP_001322660.1| - 4.9e-32 111.1 54.6 1.3e-31 109.8 17.7 5.5 2 1 5 7 7 6 3 Methyl-accepting chemotaxis protein (MCP) signalling domain dCache_3 PF14827.6 gi|150398893|ref|YP_001322660.1| - 6.6e-27 94.7 0.2 6.6e-27 94.7 0.2 2.8 3 0 0 3 3 3 1 Double sensory domain of two-component sensor kinase sCache_3_3 PF17202.4 gi|150398893|ref|YP_001322660.1| - 3.4e-26 91.8 0.5 3.4e-26 91.8 0.5 4.0 4 1 1 5 5 3 1 Single cache domain 3 Cache_3-Cache_2 PF17201.4 gi|150398893|ref|YP_001322660.1| - 6.4e-18 65.0 2.3 6.4e-18 65.0 2.3 4.4 3 1 1 4 4 4 1 Cache 3/Cache 2 fusion domain HAMP PF00672.25 gi|150398893|ref|YP_001322660.1| - 3e-13 49.9 0.0 3e-08 33.9 0.0 4.5 4 0 0 4 4 4 2 HAMP domain DUF948 PF06103.11 gi|150398893|ref|YP_001322660.1| - 1.6e-07 31.5 40.1 0.095 13.0 1.8 6.7 3 2 2 5 5 5 4 Bacterial protein of unknown function (DUF948) sCache_3_2 PF17203.4 gi|150398893|ref|YP_001322660.1| - 2.8e-07 30.8 13.7 0.00048 20.3 0.1 4.4 4 1 1 5 5 5 2 Single cache domain 3 DUF1664 PF07889.12 gi|150398893|ref|YP_001322660.1| - 3.8e-05 23.7 36.7 0.021 14.8 0.6 6.4 4 1 1 5 5 5 3 Protein of unknown function (DUF1664) Mod_r PF07200.13 gi|150398893|ref|YP_001322660.1| - 0.0084 16.2 24.6 0.053 13.6 1.2 3.8 3 1 0 4 4 3 2 Modifier of rudimentary (Mod(r)) protein DASH_Dad1 PF08649.10 gi|150398893|ref|YP_001322660.1| - 0.03 14.5 19.2 0.14 12.4 0.3 5.1 5 0 0 5 5 3 0 DASH complex subunit Dad1 Laminin_I PF06008.14 gi|150398893|ref|YP_001322660.1| - 0.033 13.9 36.0 0.76 9.4 1.0 4.4 1 1 3 4 4 4 0 Laminin Domain I SpecificRecomb PF10136.9 gi|150398893|ref|YP_001322660.1| - 0.04 12.2 9.4 0.0094 14.3 5.5 1.8 2 0 0 2 2 2 0 Site-specific recombinase DUF3450 PF11932.8 gi|150398893|ref|YP_001322660.1| - 0.11 11.7 28.8 0.13 11.6 0.5 4.4 3 1 2 5 5 5 0 Protein of unknown function (DUF3450) WXG100 PF06013.12 gi|150398893|ref|YP_001322660.1| - 0.12 12.7 18.5 6.5 7.1 2.7 5.9 4 1 1 6 6 6 0 Proteins of 100 residues with WXG Sp38 PF07354.12 gi|150398893|ref|YP_001322660.1| - 0.12 11.8 0.4 0.31 10.5 0.4 1.7 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) Spectrin PF00435.21 gi|150398893|ref|YP_001322660.1| - 0.18 12.3 19.2 11 6.6 0.5 5.3 3 1 2 5 5 5 0 Spectrin repeat DUF2959 PF11172.8 gi|150398893|ref|YP_001322660.1| - 0.19 11.8 30.2 1.1 9.3 1.1 5.6 2 1 2 5 5 5 0 Protein of unknown function (DUF2959) DUF3540 PF12059.8 gi|150398893|ref|YP_001322660.1| - 0.25 11.2 13.3 0.1 12.4 0.5 3.8 4 0 0 4 4 4 0 Protein of unknown function (DUF3540) HicB_lk_antitox PF15919.5 gi|150398893|ref|YP_001322660.1| - 0.27 11.3 14.6 1.4 9.0 1.7 4.7 4 1 1 5 5 5 0 HicB_like antitoxin of bacterial toxin-antitoxin system V-SNARE_C PF12352.8 gi|150398893|ref|YP_001322660.1| - 0.37 11.1 5.5 0.55 10.6 0.9 3.4 3 0 0 3 3 3 0 Snare region anchored in the vesicle membrane C-terminus GARP PF16731.5 gi|150398893|ref|YP_001322660.1| - 0.43 10.2 40.4 0.2 11.3 6.7 4.2 2 2 0 3 3 3 0 Glutamic acid/alanine-rich protein of Trypanosoma Syntaxin-6_N PF09177.11 gi|150398893|ref|YP_001322660.1| - 0.45 11.1 30.1 0.52 10.9 1.2 5.4 3 1 3 6 6 5 0 Syntaxin 6, N-terminal CK2S PF15011.6 gi|150398893|ref|YP_001322660.1| - 0.5 10.2 9.3 0.9 9.4 0.0 3.7 3 1 0 3 3 3 0 Casein Kinase 2 substrate HisKA PF00512.25 gi|150398893|ref|YP_001322660.1| - 0.79 9.8 2.8 39 4.4 0.1 4.0 4 0 0 4 4 4 0 His Kinase A (phospho-acceptor) domain DUF2524 PF10732.9 gi|150398893|ref|YP_001322660.1| - 0.89 9.9 0.0 0.89 9.9 0.0 4.5 4 1 2 6 6 5 0 Protein of unknown function (DUF2524) BDV_P24 PF06595.11 gi|150398893|ref|YP_001322660.1| - 0.94 9.3 11.2 0.7 9.7 3.3 3.2 1 1 0 2 2 2 0 Borna disease virus P24 protein Fib_alpha PF08702.10 gi|150398893|ref|YP_001322660.1| - 0.98 9.6 35.0 0.36 11.0 9.0 5.8 2 1 4 6 6 6 0 Fibrinogen alpha/beta chain family Laminin_II PF06009.12 gi|150398893|ref|YP_001322660.1| - 1 9.4 42.9 0.11 12.5 2.1 5.3 2 2 4 6 6 6 0 Laminin Domain II Spc7 PF08317.11 gi|150398893|ref|YP_001322660.1| - 1 8.1 33.4 0.19 10.6 8.3 3.6 1 1 2 3 3 3 0 Spc7 kinetochore protein BLOC1_2 PF10046.9 gi|150398893|ref|YP_001322660.1| - 1.1 9.6 36.1 1.7 9.0 1.2 6.2 2 2 3 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Phasin_2 PF09361.10 gi|150398893|ref|YP_001322660.1| - 1.7 9.0 20.8 4.7 7.6 8.1 4.2 3 0 0 3 3 3 0 Phasin protein Med30 PF11315.8 gi|150398893|ref|YP_001322660.1| - 3.9 7.7 15.2 1.7 8.9 0.4 4.3 2 2 1 4 4 4 0 Mediator complex subunit 30 ISG65-75 PF11727.8 gi|150398893|ref|YP_001322660.1| - 4 6.6 37.6 0.16 11.2 4.6 4.0 2 2 2 4 4 4 0 Invariant surface glycoprotein Snapin_Pallidin PF14712.6 gi|150398893|ref|YP_001322660.1| - 5.3 7.5 22.5 14 6.2 0.1 5.7 4 1 1 5 5 5 0 Snapin/Pallidin EzrA PF06160.12 gi|150398893|ref|YP_001322660.1| - 5.8 5.0 37.6 12 3.9 6.9 3.5 1 1 0 2 2 2 0 Septation ring formation regulator, EzrA DUF812 PF05667.11 gi|150398893|ref|YP_001322660.1| - 6.3 5.6 35.7 4.3 6.1 21.2 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF812) DUF1759 PF03564.15 gi|150398893|ref|YP_001322660.1| - 7.9 6.4 15.7 1.7 8.6 1.4 4.5 3 1 0 4 4 4 0 Protein of unknown function (DUF1759) Sec34 PF04136.15 gi|150398893|ref|YP_001322660.1| - 8.4 6.3 20.4 1.5 8.7 0.4 5.1 3 1 3 6 6 6 0 Sec34-like family FAM76 PF16046.5 gi|150398893|ref|YP_001322660.1| - 9.3 5.5 20.3 0.46 9.8 12.8 2.3 1 1 2 3 3 3 0 FAM76 protein DUF2203 PF09969.9 gi|150398893|ref|YP_001322660.1| - 9.6 7.0 28.1 13 6.5 1.9 5.6 2 1 2 5 5 4 0 Uncharacterized conserved protein (DUF2203) CheW PF01584.19 gi|150398894|ref|YP_001322661.1| - 2.6e-32 111.4 1.5 2.8e-32 111.2 1.5 1.0 1 0 0 1 1 1 1 CheW-like domain SPA PF08616.10 gi|150398894|ref|YP_001322661.1| - 0.079 12.9 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Stabilization of polarity axis DUF1836 PF08876.11 gi|150398895|ref|YP_001322662.1| - 0.11 12.5 3.6 3.1 7.9 0.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1836) HATPase_c PF02518.26 gi|150398896|ref|YP_001322663.1| - 1.5e-31 109.2 0.5 6.1e-31 107.2 0.1 2.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sCache_3_3 PF17202.4 gi|150398896|ref|YP_001322663.1| - 1.4e-24 86.5 2.3 1.5e-23 83.3 1.1 2.6 2 0 0 2 2 2 1 Single cache domain 3 dCache_3 PF14827.6 gi|150398896|ref|YP_001322663.1| - 1.8e-23 83.4 0.4 2.9e-23 82.8 0.4 1.3 1 0 0 1 1 1 1 Double sensory domain of two-component sensor kinase Cache_3-Cache_2 PF17201.4 gi|150398896|ref|YP_001322663.1| - 1.1e-21 77.4 1.7 1.9e-21 76.6 1.7 1.4 1 0 0 1 1 1 1 Cache 3/Cache 2 fusion domain HisKA PF00512.25 gi|150398896|ref|YP_001322663.1| - 1.4e-16 60.3 0.1 3.1e-16 59.2 0.1 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain sCache_3_2 PF17203.4 gi|150398896|ref|YP_001322663.1| - 5e-11 42.9 0.0 6.5e-05 23.1 0.0 2.5 2 0 0 2 2 2 2 Single cache domain 3 dCache_1 PF02743.18 gi|150398896|ref|YP_001322663.1| - 6.9e-09 35.8 7.7 2.5e-07 30.7 4.0 2.5 1 1 1 2 2 2 2 Cache domain HATPase_c_3 PF13589.6 gi|150398896|ref|YP_001322663.1| - 4.3e-07 29.8 1.3 1.6e-05 24.8 0.1 2.9 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|150398896|ref|YP_001322663.1| - 1e-05 25.4 0.0 4.9e-05 23.2 0.0 2.2 1 0 0 1 1 1 1 GHKL domain HAMP PF00672.25 gi|150398896|ref|YP_001322663.1| - 2.5e-05 24.5 0.0 9.6e-05 22.7 0.0 1.9 2 0 0 2 2 2 1 HAMP domain DUF1189 PF06691.11 gi|150398896|ref|YP_001322663.1| - 0.0083 15.7 0.2 0.0083 15.7 0.2 4.3 3 2 1 4 4 3 1 Protein of unknown function (DUF1189) DUF3929 PF13066.6 gi|150398896|ref|YP_001322663.1| - 0.042 13.9 0.1 0.18 11.9 0.1 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3929) HATPase_c PF02518.26 gi|150398898|ref|YP_001322665.1| - 7e-29 100.6 2.4 1.1e-28 100.0 0.2 2.3 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|150398898|ref|YP_001322665.1| - 1.1e-19 70.2 2.4 1.9e-18 66.2 0.1 2.4 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 gi|150398898|ref|YP_001322665.1| - 9.8e-07 29.0 0.8 3e-06 27.4 0.0 2.2 3 0 0 3 3 3 1 PAS domain PAS_3 PF08447.12 gi|150398898|ref|YP_001322665.1| - 4e-05 23.8 0.0 9.7e-05 22.6 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.6 gi|150398898|ref|YP_001322665.1| - 4.1e-05 23.4 1.9 4.6e-05 23.3 0.2 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|150398898|ref|YP_001322665.1| - 0.003 17.4 0.5 0.0078 16.1 0.5 1.8 1 0 0 1 1 1 1 GHKL domain UPF0223 PF05256.12 gi|150398898|ref|YP_001322665.1| - 0.022 15.1 1.1 0.23 11.8 0.2 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0223) Fe-ADH PF00465.19 gi|150398899|ref|YP_001322666.1| - 1.4e-112 376.2 0.0 1.6e-112 376.0 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|150398899|ref|YP_001322666.1| - 1.8e-17 63.9 4.4 1.9e-11 44.1 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase PAS_3 PF08447.12 gi|150398900|ref|YP_001322667.1| - 6.2e-22 77.7 0.0 4.8e-20 71.6 0.0 2.5 2 0 0 2 2 2 1 PAS fold PAS PF00989.25 gi|150398900|ref|YP_001322667.1| - 2.8e-15 56.3 0.0 2.1e-05 24.5 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.10 gi|150398900|ref|YP_001322667.1| - 3.3e-12 46.6 0.0 0.00015 22.0 0.0 3.2 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.7 gi|150398900|ref|YP_001322667.1| - 4.2e-11 43.0 1.8 2.4e-05 24.5 0.1 3.4 3 0 0 3 3 3 3 PAS domain PAS_8 PF13188.7 gi|150398900|ref|YP_001322667.1| - 0.0013 18.7 0.0 0.3 11.1 0.0 3.3 3 1 0 3 3 3 1 PAS domain Fib_alpha PF08702.10 gi|150398900|ref|YP_001322667.1| - 4.2 7.5 6.4 2.7 8.2 0.7 2.6 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family zf-CDGSH PF09360.10 gi|150398901|ref|YP_001322668.1| - 1e-35 121.7 6.5 4e-18 65.4 0.1 2.8 3 0 0 3 3 3 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 gi|150398901|ref|YP_001322668.1| - 6.4e-10 39.0 0.5 1.5e-09 37.8 0.1 1.9 2 0 0 2 2 2 1 Divergent 4Fe-4S mono-cluster FmdE PF02663.14 gi|150398902|ref|YP_001322669.1| - 1.2e-39 135.4 0.1 1.5e-39 135.0 0.1 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.17 gi|150398902|ref|YP_001322669.1| - 2.4e-07 30.6 0.3 3.9e-07 29.9 0.3 1.4 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger LIM PF00412.22 gi|150398902|ref|YP_001322669.1| - 0.0041 17.3 0.7 0.0087 16.3 0.7 1.5 1 0 0 1 1 1 1 LIM domain Zn-ribbon_8 PF09723.10 gi|150398902|ref|YP_001322669.1| - 0.0043 17.1 0.9 0.012 15.7 0.9 1.8 1 0 0 1 1 1 1 Zinc ribbon domain DUF4428 PF14471.6 gi|150398902|ref|YP_001322669.1| - 0.0096 15.8 4.5 0.023 14.6 4.5 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) Glyco_transf_15 PF01793.16 gi|150398902|ref|YP_001322669.1| - 0.016 14.5 0.3 0.02 14.2 0.3 1.2 1 0 0 1 1 1 0 Glycolipid 2-alpha-mannosyltransferase DUF1419 PF07215.11 gi|150398902|ref|YP_001322669.1| - 0.11 12.7 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1419) MIP PF00230.20 gi|150398903|ref|YP_001322670.1| - 5.5e-50 170.2 18.0 6.2e-50 170.0 18.0 1.0 1 0 0 1 1 1 1 Major intrinsic protein DUF5510 PF17629.2 gi|150398903|ref|YP_001322670.1| - 0.19 11.7 0.4 0.19 11.7 0.4 3.6 4 1 1 5 5 5 0 Family of unknown function (DUF5510) DUF2512 PF10710.9 gi|150398903|ref|YP_001322670.1| - 2.9 7.6 7.3 1.8 8.2 4.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2512) DUF2180 PF09947.9 gi|150398904|ref|YP_001322671.1| - 1.8e-35 120.7 5.7 2e-35 120.6 5.7 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) Transp_Tc5_C PF04236.15 gi|150398904|ref|YP_001322671.1| - 0.024 15.0 1.8 0.024 15.0 1.8 1.6 2 0 0 2 2 2 0 Tc5 transposase C-terminal domain Elf1 PF05129.13 gi|150398904|ref|YP_001322671.1| - 0.3 11.2 2.9 0.54 10.3 1.0 2.0 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like DUF2193 PF09959.9 gi|150398905|ref|YP_001322672.1| - 4.2e-275 912.9 3.4 4.7e-275 912.7 3.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2193) Hydant_A_N PF05378.13 gi|150398905|ref|YP_001322672.1| - 0.015 15.0 0.2 4.8 6.9 0.0 2.4 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase N-terminal region YliH PF10799.8 gi|150398905|ref|YP_001322672.1| - 0.071 13.0 0.1 0.17 11.8 0.1 1.7 1 0 0 1 1 1 0 Biofilm formation protein (YliH/bssR) Ins134_P3_kin_N PF17927.1 gi|150398905|ref|YP_001322672.1| - 0.094 13.1 0.1 32 5.0 0.0 3.1 3 0 0 3 3 3 0 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain CKAP2_C PF15297.6 gi|150398905|ref|YP_001322672.1| - 0.1 11.7 0.3 0.2 10.7 0.3 1.5 1 0 0 1 1 1 0 Cytoskeleton-associated protein 2 C-terminus DUF326 PF03860.16 gi|150398905|ref|YP_001322672.1| - 0.82 9.7 5.2 2.2 8.4 5.2 1.7 1 0 0 1 1 1 0 Domain of Unknown Function (DUF326) Pyr_redox_2 PF07992.14 gi|150398907|ref|YP_001322674.1| - 3.7e-43 147.8 2.4 4.2e-43 147.7 2.4 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|150398907|ref|YP_001322674.1| - 1.7e-27 96.5 7.0 1.7e-21 76.8 0.6 2.0 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|150398907|ref|YP_001322674.1| - 1e-11 45.2 7.3 1.5e-10 41.5 1.1 2.7 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|150398907|ref|YP_001322674.1| - 2e-10 40.3 3.1 1.9e-06 27.3 0.3 3.3 3 1 0 3 3 3 2 FAD binding domain HI0933_like PF03486.14 gi|150398907|ref|YP_001322674.1| - 8.7e-09 34.6 2.3 2.7e-05 23.1 0.5 3.1 3 0 0 3 3 3 2 HI0933-like protein FAD_oxidored PF12831.7 gi|150398907|ref|YP_001322674.1| - 1e-06 28.4 1.0 0.00021 20.8 0.0 2.9 2 1 1 3 3 3 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|150398907|ref|YP_001322674.1| - 5.1e-06 25.9 0.8 0.0016 17.7 0.2 2.3 2 0 0 2 2 2 2 Thi4 family NAD_binding_8 PF13450.6 gi|150398907|ref|YP_001322674.1| - 3.9e-05 23.8 0.1 0.00069 19.8 0.1 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|150398907|ref|YP_001322674.1| - 0.00051 19.2 0.1 0.04 13.0 0.2 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein DAO PF01266.24 gi|150398907|ref|YP_001322674.1| - 0.00089 18.9 0.7 0.017 14.8 0.3 2.5 2 1 1 3 3 3 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|150398907|ref|YP_001322674.1| - 0.0051 16.1 0.0 0.0081 15.5 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain NAD_binding_9 PF13454.6 gi|150398907|ref|YP_001322674.1| - 0.0069 16.4 0.3 3.5 7.6 0.5 2.6 3 0 0 3 3 3 1 FAD-NAD(P)-binding Trp_halogenase PF04820.14 gi|150398907|ref|YP_001322674.1| - 0.0076 15.1 0.4 0.6 8.9 0.2 2.1 2 0 0 2 2 2 1 Tryptophan halogenase AlaDh_PNT_C PF01262.21 gi|150398907|ref|YP_001322674.1| - 0.011 15.0 0.8 3.5 6.8 0.1 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain GIDA PF01134.22 gi|150398907|ref|YP_001322674.1| - 0.02 14.0 11.3 0.03 13.4 0.5 3.9 3 2 0 4 4 4 0 Glucose inhibited division protein A Moricin PF06451.11 gi|150398907|ref|YP_001322674.1| - 0.13 12.0 0.2 0.47 10.3 0.0 2.0 2 0 0 2 2 2 0 Moricin K_oxygenase PF13434.6 gi|150398907|ref|YP_001322674.1| - 0.19 10.8 0.1 8.5 5.4 0.0 2.2 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Helicase_C PF00271.31 gi|150398908|ref|YP_001322675.1| - 4.6e-18 65.6 0.2 4e-17 62.6 0.2 2.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 gi|150398908|ref|YP_001322675.1| - 8.7e-14 51.0 0.4 3.2e-12 45.9 0.4 2.7 1 1 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 gi|150398908|ref|YP_001322675.1| - 3.2e-12 46.8 3.2 1.1e-09 38.5 0.0 3.5 2 1 0 2 2 2 2 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|150398908|ref|YP_001322675.1| - 2.3e-05 24.2 0.2 0.0018 18.1 0.0 3.3 2 1 0 2 2 2 1 DEAD/DEAH box helicase AAA_34 PF13872.6 gi|150398908|ref|YP_001322675.1| - 7.3e-05 21.8 0.1 0.0029 16.5 0.1 2.8 2 1 0 2 2 2 1 P-loop containing NTP hydrolase pore-1 DUF4391 PF14335.6 gi|150398909|ref|YP_001322676.1| - 3.6e-31 108.7 17.3 4.5e-31 108.4 17.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4391) N6_N4_Mtase PF01555.18 gi|150398910|ref|YP_001322677.1| - 1.4e-42 146.0 4.9 3.3e-42 144.8 4.9 1.6 1 0 0 1 1 1 1 DNA methylase Cons_hypoth95 PF03602.15 gi|150398910|ref|YP_001322677.1| - 0.035 13.8 0.0 0.49 10.0 0.0 2.6 2 0 0 2 2 2 0 Conserved hypothetical protein 95 SpoU_sub_bind PF08032.12 gi|150398910|ref|YP_001322677.1| - 0.23 11.8 0.7 7.6 6.9 0.1 3.2 3 0 0 3 3 3 0 RNA 2'-O ribose methyltransferase substrate binding ResIII PF04851.15 gi|150398911|ref|YP_001322678.1| - 1.6e-16 60.8 3.5 1.6e-16 60.8 3.5 3.8 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|150398911|ref|YP_001322678.1| - 2.9e-05 23.9 0.0 0.00013 21.8 0.0 2.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase PhoH PF02562.16 gi|150398911|ref|YP_001322678.1| - 0.014 14.9 0.0 0.05 13.0 0.0 2.0 1 0 0 1 1 1 0 PhoH-like protein DUF4423 PF14394.6 gi|150398911|ref|YP_001322678.1| - 0.034 13.9 8.3 0.23 11.2 2.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) NAD2 PF18782.1 gi|150398911|ref|YP_001322678.1| - 0.064 13.4 0.0 0.2 11.8 0.0 1.8 2 0 0 2 2 2 0 Novel AID APOBEC clade 2 DUF5621 PF18532.1 gi|150398911|ref|YP_001322678.1| - 0.12 12.3 4.4 0.41 10.5 0.2 3.4 2 1 0 3 3 3 0 Domain of unknown function (DUF5621) STAT_int PF02865.17 gi|150398911|ref|YP_001322678.1| - 0.75 10.3 3.9 0.77 10.2 1.7 2.3 2 0 0 2 2 2 0 STAT protein, protein interaction domain TACC_C PF05010.14 gi|150398912|ref|YP_001322679.1| - 0.072 12.9 0.3 0.094 12.5 0.3 1.2 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal CoA_binding PF02629.19 gi|150398913|ref|YP_001322680.1| - 3e-28 98.4 2.8 1.2e-27 96.4 1.1 2.4 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 gi|150398913|ref|YP_001322680.1| - 2.1e-18 66.6 0.7 3.5e-18 65.9 0.7 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 gi|150398913|ref|YP_001322680.1| - 5.2e-11 42.5 0.1 8.4e-11 41.8 0.1 1.3 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|150398913|ref|YP_001322680.1| - 4.5e-05 23.9 0.1 7.9e-05 23.1 0.1 1.4 1 0 0 1 1 1 1 CoA binding domain GFO_IDH_MocA PF01408.22 gi|150398913|ref|YP_001322680.1| - 0.017 16.0 0.1 0.047 14.5 0.1 1.8 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Topoisom_bac PF01131.20 gi|150398914|ref|YP_001322681.1| - 5.6e-120 401.1 3.1 5.6e-120 401.1 3.1 1.6 2 0 0 2 2 2 1 DNA topoisomerase zf-C4_Topoisom PF01396.19 gi|150398914|ref|YP_001322681.1| - 6.7e-40 134.6 37.7 3.6e-17 61.8 5.9 4.3 4 0 0 4 4 4 3 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.22 gi|150398914|ref|YP_001322681.1| - 5.2e-18 65.2 0.1 5.2e-18 65.2 0.1 2.9 3 0 0 3 3 3 1 Toprim domain Ogr_Delta PF04606.12 gi|150398914|ref|YP_001322681.1| - 0.045 13.7 7.2 2.2 8.3 0.0 4.6 4 1 0 4 4 4 0 Ogr/Delta-like zinc finger DZR PF12773.7 gi|150398914|ref|YP_001322681.1| - 0.058 13.4 7.0 10 6.3 7.0 3.1 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|150398914|ref|YP_001322681.1| - 0.25 10.8 8.4 2.7 7.5 0.2 3.4 3 0 0 3 3 3 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|150398914|ref|YP_001322681.1| - 0.47 9.8 5.0 8.8 5.8 0.7 3.1 2 0 0 2 2 2 0 Transcription factor zinc-finger zinc_ribbon_2 PF13240.6 gi|150398914|ref|YP_001322681.1| - 1.1 9.1 10.0 2.6 7.9 0.5 3.7 3 0 0 3 3 3 0 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|150398914|ref|YP_001322681.1| - 1.4 9.4 15.5 52 4.3 7.5 3.8 1 1 1 2 2 2 0 Restriction alleviation protein Lar DUF1272 PF06906.11 gi|150398914|ref|YP_001322681.1| - 2 8.6 8.2 13 6.0 0.0 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF1272) Zn-ribbon_8 PF09723.10 gi|150398914|ref|YP_001322681.1| - 6.2 7.0 13.2 5.4 7.2 1.4 3.4 3 0 0 3 3 3 0 Zinc ribbon domain zinc_ribbon_9 PF14369.6 gi|150398915|ref|YP_001322682.1| - 0.001 19.3 0.8 0.075 13.3 0.1 2.2 2 0 0 2 2 2 1 zinc-ribbon DUF4451 PF14616.6 gi|150398915|ref|YP_001322682.1| - 0.0081 16.4 1.2 2.4 8.4 0.1 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4451) zinc_ribbon_5 PF13719.6 gi|150398915|ref|YP_001322682.1| - 0.01 15.6 1.8 1.2 9.0 0.1 2.2 1 1 1 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|150398915|ref|YP_001322682.1| - 0.011 15.1 3.1 1.4 8.4 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1 PF03811.13 gi|150398915|ref|YP_001322682.1| - 0.023 14.4 1.0 2.4 8.0 0.1 2.2 2 0 0 2 2 2 0 InsA N-terminal domain IBR PF01485.21 gi|150398915|ref|YP_001322682.1| - 0.023 14.9 0.3 0.031 14.5 0.3 1.2 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain zf-LITAF-like PF10601.9 gi|150398915|ref|YP_001322682.1| - 0.03 14.6 2.2 3.2 8.1 0.1 2.3 1 1 0 2 2 2 0 LITAF-like zinc ribbon domain zf-TFIIB PF13453.6 gi|150398915|ref|YP_001322682.1| - 0.038 13.3 0.9 1 8.7 0.2 2.3 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-C4_Topoisom PF01396.19 gi|150398915|ref|YP_001322682.1| - 0.052 13.3 1.0 1.4 8.7 0.1 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger CpXC PF14353.6 gi|150398915|ref|YP_001322682.1| - 0.054 13.5 2.1 0.62 10.1 0.1 2.2 1 1 1 2 2 2 0 CpXC protein zf_UBZ PF18439.1 gi|150398915|ref|YP_001322682.1| - 0.096 12.3 1.0 8.4 6.1 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 gi|150398915|ref|YP_001322682.1| - 0.18 11.9 1.4 0.47 10.6 1.4 1.7 1 1 1 2 2 2 0 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|150398915|ref|YP_001322682.1| - 0.23 11.4 5.7 3.1 7.8 0.4 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zf-RING_2 PF13639.6 gi|150398915|ref|YP_001322682.1| - 0.24 11.8 2.6 0.88 10.0 2.6 1.8 1 1 0 1 1 1 0 Ring finger domain Anti-TRAP PF15777.5 gi|150398915|ref|YP_001322682.1| - 1.4 8.9 4.3 11 6.1 0.3 2.2 1 1 1 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF3784 PF12650.7 gi|150398916|ref|YP_001322683.1| - 1.2e-21 76.7 10.8 1.5e-21 76.4 10.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3784) Tetraspanin PF00335.20 gi|150398916|ref|YP_001322683.1| - 0.019 14.7 7.0 0.025 14.3 7.0 1.2 1 0 0 1 1 1 0 Tetraspanin family DUF1084 PF06454.11 gi|150398916|ref|YP_001322683.1| - 0.029 13.7 4.7 0.036 13.4 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DUF2157 PF09925.9 gi|150398916|ref|YP_001322683.1| - 0.093 12.5 2.9 0.045 13.5 0.7 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) Neurensin PF14927.6 gi|150398916|ref|YP_001322683.1| - 0.12 12.1 0.9 0.13 12.0 0.2 1.4 1 1 0 1 1 1 0 Neurensin PTPS PF01242.19 gi|150398917|ref|YP_001322684.1| - 9.8e-15 54.6 0.2 1.4e-14 54.1 0.2 1.1 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Meis_PKNOX_N PF16493.5 gi|150398917|ref|YP_001322684.1| - 0.11 12.8 0.6 0.41 11.0 0.1 2.1 2 1 0 2 2 2 0 N-terminal of Homeobox Meis and PKNOX1 Aldedh PF00171.22 gi|150398918|ref|YP_001322685.1| - 1.3e-100 337.1 0.0 1.6e-100 336.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Cullin_Nedd8 PF10557.9 gi|150398918|ref|YP_001322685.1| - 0.11 12.5 1.4 0.32 11.0 0.2 2.3 3 0 0 3 3 3 0 Cullin protein neddylation domain Dimer_Tnp_Tn5 PF02281.16 gi|150398919|ref|YP_001322686.1| - 0.16 11.7 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Transposase Tn5 dimerisation domain Trypsin_2 PF13365.6 gi|150398920|ref|YP_001322687.1| - 1.6e-14 55.0 0.0 2.1e-14 54.7 0.0 1.1 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 gi|150398920|ref|YP_001322687.1| - 5.2e-09 36.2 0.0 7.3e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 Trypsin S_layer_C PF05124.12 gi|150398921|ref|YP_001322688.1| - 5.9e-14 52.6 1.0 5.9e-14 52.6 1.0 1.7 2 0 0 2 2 2 1 S-layer like family, C-terminal region CARDB PF07705.11 gi|150398922|ref|YP_001322689.1| - 5.5e-12 45.8 6.3 5.5e-12 45.8 6.3 6.4 5 1 2 7 7 7 1 CARDB TED_complement PF07678.14 gi|150398922|ref|YP_001322689.1| - 2.8e-11 43.0 0.2 5.1e-11 42.2 0.2 1.4 1 0 0 1 1 1 1 A-macroglobulin TED domain SQHop_cyclase_C PF13243.6 gi|150398922|ref|YP_001322689.1| - 0.01 15.0 1.1 0.013 14.6 0.1 1.6 2 0 0 2 2 2 0 Squalene-hopene cyclase C-terminal domain Big_1 PF02369.16 gi|150398922|ref|YP_001322689.1| - 0.012 15.6 7.4 2.2 8.4 0.0 5.3 3 1 0 3 3 3 0 Bacterial Ig-like domain (group 1) MG4 PF17789.1 gi|150398922|ref|YP_001322689.1| - 1.2 9.4 8.9 1.1 9.4 0.3 3.8 5 0 0 5 5 5 0 Macroglobulin domain MG4 Peptidase_M49 PF03571.15 gi|150398923|ref|YP_001322690.1| - 0.0018 16.7 0.8 0.0028 16.1 0.8 1.3 1 1 0 1 1 1 1 Peptidase family M49 HEAT_2 PF13646.6 gi|150398924|ref|YP_001322691.1| - 0.0069 16.8 0.0 7.2 7.1 0.0 2.5 2 1 0 2 2 2 2 HEAT repeats DUF1091 PF06477.13 gi|150398924|ref|YP_001322691.1| - 0.1 13.1 1.6 1 9.9 0.0 2.7 2 2 0 2 2 2 0 Protein of unknown function (DUF1091) ATP_bind_3 PF01171.20 gi|150398925|ref|YP_001322692.1| - 1.3e-10 41.4 0.0 2.6e-10 40.4 0.0 1.5 1 1 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.16 gi|150398925|ref|YP_001322692.1| - 1.9e-06 27.0 0.0 2.6e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|150398925|ref|YP_001322692.1| - 2.2e-06 27.0 0.0 6e-06 25.6 0.0 1.7 2 0 0 2 2 2 1 NAD synthase zn-ribbon_14 PF16503.5 gi|150398925|ref|YP_001322692.1| - 9.6e-05 21.8 1.0 9.6e-05 21.8 1.0 3.8 5 0 0 5 5 5 1 Zinc-ribbon PAPS_reduct PF01507.19 gi|150398925|ref|YP_001322692.1| - 0.002 18.2 0.0 0.011 15.8 0.0 2.2 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family RecR PF02132.15 gi|150398925|ref|YP_001322692.1| - 0.002 17.6 0.7 0.002 17.6 0.7 3.6 4 0 0 4 4 4 1 RecR protein TF_Zn_Ribbon PF08271.12 gi|150398925|ref|YP_001322692.1| - 5.3 6.7 14.6 0.19 11.3 1.1 3.7 3 1 0 3 3 3 0 TFIIB zinc-binding tRNA-synt_1e PF01406.19 gi|150398926|ref|YP_001322693.1| - 2.9e-111 371.7 1.1 3.9e-111 371.2 1.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|150398926|ref|YP_001322693.1| - 1.5e-17 63.4 6.7 6.4e-10 38.3 0.8 2.6 2 1 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.11 gi|150398926|ref|YP_001322693.1| - 1.3e-12 48.0 1.0 3.3e-12 46.7 1.0 1.7 1 0 0 1 1 1 1 DALR domain tRNA-synt_1 PF00133.22 gi|150398926|ref|YP_001322693.1| - 1.1e-09 37.2 0.1 1.6e-07 30.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 gi|150398926|ref|YP_001322693.1| - 0.00084 18.4 0.1 0.015 14.3 0.1 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1d PF00750.19 gi|150398926|ref|YP_001322693.1| - 0.0022 17.0 0.1 0.0022 17.0 0.1 1.7 2 0 0 2 2 2 1 tRNA synthetases class I (R) tRNA-synt_1c PF00749.21 gi|150398926|ref|YP_001322693.1| - 0.0078 15.1 2.9 0.16 10.8 1.1 3.3 2 1 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain Cys_Met_Meta_PP PF01053.20 gi|150398927|ref|YP_001322694.1| - 3.5e-139 463.6 0.0 4e-139 463.4 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|150398927|ref|YP_001322694.1| - 9.8e-11 41.6 0.0 1.8e-10 40.7 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|150398927|ref|YP_001322694.1| - 1.6e-07 30.6 0.1 2.5e-07 30.0 0.1 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|150398927|ref|YP_001322694.1| - 1.1e-06 28.2 0.0 1.5e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|150398927|ref|YP_001322694.1| - 0.021 14.1 0.0 0.048 12.9 0.0 1.6 1 1 0 1 1 1 0 Beta-eliminating lyase Met_gamma_lyase PF06838.11 gi|150398927|ref|YP_001322694.1| - 0.065 11.7 0.5 0.33 9.4 0.5 2.0 1 1 0 1 1 1 0 Methionine gamma-lyase Abhydrolase_1 PF00561.20 gi|150398928|ref|YP_001322695.1| - 1.1e-31 110.4 0.0 1.4e-31 110.1 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold CBS PF00571.28 gi|150398928|ref|YP_001322695.1| - 1.2e-25 89.6 0.4 1.9e-12 47.4 0.0 3.3 3 0 0 3 3 3 2 CBS domain Hydrolase_4 PF12146.8 gi|150398928|ref|YP_001322695.1| - 0.00056 19.2 0.0 0.0019 17.5 0.0 1.7 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|150398928|ref|YP_001322695.1| - 0.008 16.8 0.0 0.0093 16.6 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF512 PF04459.12 gi|150398928|ref|YP_001322695.1| - 0.051 12.8 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF512) Esterase PF00756.20 gi|150398928|ref|YP_001322695.1| - 0.075 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Putative esterase Thioredoxin_8 PF13905.6 gi|150398928|ref|YP_001322695.1| - 0.097 13.0 1.5 1.8 8.9 0.0 3.0 3 0 0 3 3 3 0 Thioredoxin-like Aminotran_5 PF00266.19 gi|150398929|ref|YP_001322696.1| - 3.6e-84 282.8 0.1 4.5e-84 282.6 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|150398929|ref|YP_001322696.1| - 2.1e-07 30.6 0.2 3.4e-07 29.9 0.2 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|150398929|ref|YP_001322696.1| - 1.4e-06 27.8 0.0 2e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|150398929|ref|YP_001322696.1| - 0.042 12.4 0.2 0.063 11.8 0.2 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme NifU_N PF01592.16 gi|150398930|ref|YP_001322697.1| - 2.3e-48 163.6 0.1 2.5e-48 163.5 0.1 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain TSCPD PF12637.7 gi|150398930|ref|YP_001322697.1| - 0.035 14.4 0.0 0.063 13.5 0.0 1.4 1 0 0 1 1 1 0 TSCPD domain ATP_bind_3 PF01171.20 gi|150398931|ref|YP_001322698.1| - 3.7e-19 69.2 0.0 1.6e-18 67.1 0.0 1.9 1 1 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.16 gi|150398931|ref|YP_001322698.1| - 2.7e-07 29.7 0.0 3.9e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase PAPS_reduct PF01507.19 gi|150398931|ref|YP_001322698.1| - 0.0061 16.6 0.0 0.2 11.7 0.0 2.3 2 0 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.17 gi|150398931|ref|YP_001322698.1| - 0.018 14.2 0.3 0.069 12.2 0.2 2.1 2 1 0 2 2 2 0 NAD synthase QueC PF06508.13 gi|150398931|ref|YP_001322698.1| - 0.053 13.0 0.0 0.15 11.5 0.0 1.8 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|150398931|ref|YP_001322698.1| - 0.26 10.9 0.0 0.35 10.5 0.0 1.1 1 0 0 1 1 1 0 Asparagine synthase HTH_5 PF01022.20 gi|150398932|ref|YP_001322699.1| - 1.8e-05 24.5 0.8 7.4e-05 22.5 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_3 PF01381.22 gi|150398932|ref|YP_001322699.1| - 0.00012 22.1 0.1 0.00021 21.3 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_37 PF13744.6 gi|150398932|ref|YP_001322699.1| - 0.00055 19.8 0.0 0.00087 19.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|150398932|ref|YP_001322699.1| - 0.0031 17.0 0.0 0.0063 16.1 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|150398932|ref|YP_001322699.1| - 0.013 15.3 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain DUF4473 PF14747.6 gi|150398932|ref|YP_001322699.1| - 0.019 15.5 0.0 0.028 15.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) Sigma70_r4 PF04545.16 gi|150398932|ref|YP_001322699.1| - 0.032 13.8 0.1 0.062 12.8 0.0 1.4 1 1 0 1 1 1 0 Sigma-70, region 4 YdaS_antitoxin PF15943.5 gi|150398932|ref|YP_001322699.1| - 0.046 13.6 0.0 0.11 12.4 0.0 1.6 1 1 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Trp_repressor PF01371.19 gi|150398932|ref|YP_001322699.1| - 0.055 13.6 0.1 0.097 12.8 0.1 1.4 1 0 0 1 1 1 0 Trp repressor protein MarR_2 PF12802.7 gi|150398932|ref|YP_001322699.1| - 0.057 13.3 0.0 0.096 12.6 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_40 PF14493.6 gi|150398932|ref|YP_001322699.1| - 0.07 13.6 0.1 0.11 12.9 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|150398932|ref|YP_001322699.1| - 0.082 12.9 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.6 gi|150398932|ref|YP_001322699.1| - 0.089 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 gi|150398932|ref|YP_001322699.1| - 0.16 11.8 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain Hexapep PF00132.24 gi|150398933|ref|YP_001322700.1| - 2.8e-16 58.5 14.0 7.5e-09 35.0 6.0 2.8 2 1 1 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|150398933|ref|YP_001322700.1| - 0.0003 20.5 19.1 0.033 13.9 7.9 2.9 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Lamprin PF06403.11 gi|150398933|ref|YP_001322700.1| - 0.031 14.2 1.4 0.044 13.7 1.4 1.1 1 0 0 1 1 1 0 Lamprin SATase_N PF06426.14 gi|150398933|ref|YP_001322700.1| - 0.066 13.6 0.0 0.14 12.5 0.0 1.5 2 0 0 2 2 2 0 Serine acetyltransferase, N-terminal PALP PF00291.25 gi|150398934|ref|YP_001322701.1| - 2.5e-65 220.8 0.1 2.8e-65 220.6 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF2149 PF09919.9 gi|150398935|ref|YP_001322702.1| - 1.2e-21 76.7 0.5 1.6e-21 76.3 0.5 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) MotA_ExbB PF01618.16 gi|150398936|ref|YP_001322703.1| - 8.1e-12 45.0 0.1 1.4e-11 44.3 0.1 1.5 1 1 0 1 1 1 1 MotA/TolQ/ExbB proton channel family SLATT_5 PF18160.1 gi|150398936|ref|YP_001322703.1| - 0.014 14.7 5.2 0.029 13.7 5.2 1.5 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 LapA_dom PF06305.11 gi|150398936|ref|YP_001322703.1| - 0.063 13.1 0.3 2.2 8.1 0.1 2.4 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DNA_pol_delta_4 PF04081.13 gi|150398936|ref|YP_001322703.1| - 0.079 13.3 0.1 0.16 12.3 0.1 1.4 1 0 0 1 1 1 0 DNA polymerase delta, subunit 4 Armet PF10208.9 gi|150398936|ref|YP_001322703.1| - 0.11 12.5 0.7 0.26 11.2 0.7 1.6 1 1 0 1 1 1 0 Degradation arginine-rich protein for mis-folding DUF2162 PF09930.9 gi|150398937|ref|YP_001322704.1| - 3.5e-63 213.0 27.3 3.9e-63 212.9 27.3 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) OTCace PF00185.24 gi|150398938|ref|YP_001322705.1| - 1.1e-54 184.7 0.0 1.9e-54 184.0 0.0 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|150398938|ref|YP_001322705.1| - 2.3e-47 160.8 0.0 3.5e-47 160.1 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PRO8NT PF08082.11 gi|150398938|ref|YP_001322705.1| - 0.018 15.0 0.0 0.079 12.9 0.0 2.1 2 0 0 2 2 2 0 PRO8NT (NUC069), PrP8 N-terminal domain MTS PF05175.14 gi|150398939|ref|YP_001322706.1| - 3.8e-46 156.7 0.1 4.4e-46 156.5 0.1 1.0 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|150398939|ref|YP_001322706.1| - 3.4e-11 43.1 1.3 3.4e-11 43.1 1.3 1.3 2 0 0 2 2 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|150398939|ref|YP_001322706.1| - 1e-10 41.6 0.1 1.2e-10 41.4 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|150398939|ref|YP_001322706.1| - 3.3e-10 40.5 0.0 4.8e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|150398939|ref|YP_001322706.1| - 9.4e-10 38.6 0.8 1.5e-09 38.0 0.8 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|150398939|ref|YP_001322706.1| - 6.5e-08 32.0 0.1 8.9e-08 31.5 0.1 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_16 PF10294.9 gi|150398939|ref|YP_001322706.1| - 3.4e-07 30.2 0.4 4e-07 29.9 0.4 1.2 1 0 0 1 1 1 1 Lysine methyltransferase tRNA_U5-meth_tr PF05958.11 gi|150398939|ref|YP_001322706.1| - 4.8e-07 29.1 0.0 6e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Cons_hypoth95 PF03602.15 gi|150398939|ref|YP_001322706.1| - 5.5e-07 29.4 0.0 7.4e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 gi|150398939|ref|YP_001322706.1| - 1.1e-06 29.2 0.0 1.7e-06 28.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|150398939|ref|YP_001322706.1| - 1.9e-06 28.6 0.1 2.6e-06 28.1 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|150398939|ref|YP_001322706.1| - 2.9e-06 26.9 0.6 4.1e-06 26.5 0.6 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase CMAS PF02353.20 gi|150398939|ref|YP_001322706.1| - 1.4e-05 24.6 0.1 1.5e-05 24.4 0.1 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase N6_Mtase PF02384.16 gi|150398939|ref|YP_001322706.1| - 1.8e-05 24.2 0.1 2.8e-05 23.6 0.1 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase Met_10 PF02475.16 gi|150398939|ref|YP_001322706.1| - 3e-05 23.9 0.1 3.8e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.6 gi|150398939|ref|YP_001322706.1| - 3.1e-05 23.9 0.0 3.8e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|150398939|ref|YP_001322706.1| - 0.00014 21.3 0.8 0.00036 20.0 0.5 1.7 2 0 0 2 2 2 1 Tellurite resistance protein TehB UPF0020 PF01170.18 gi|150398939|ref|YP_001322706.1| - 0.00026 20.8 0.2 0.00041 20.1 0.2 1.3 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 GidB PF02527.15 gi|150398939|ref|YP_001322706.1| - 0.0013 18.0 0.1 0.0018 17.6 0.1 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PCMT PF01135.19 gi|150398939|ref|YP_001322706.1| - 0.0024 17.7 0.1 0.0028 17.4 0.1 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.11 gi|150398939|ref|YP_001322706.1| - 0.0038 16.9 0.0 0.0059 16.2 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) TRM PF02005.16 gi|150398939|ref|YP_001322706.1| - 0.0074 15.5 0.2 0.0088 15.3 0.2 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltrans_SAM PF10672.9 gi|150398939|ref|YP_001322706.1| - 0.032 13.4 0.1 0.039 13.1 0.1 1.2 1 0 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase Methyltransf_4 PF02390.17 gi|150398939|ref|YP_001322706.1| - 0.033 13.7 0.4 0.044 13.2 0.4 1.3 1 1 0 1 1 1 0 Putative methyltransferase AviRa PF11599.8 gi|150398939|ref|YP_001322706.1| - 0.057 12.9 0.6 0.15 11.5 0.1 1.8 1 1 1 2 2 2 0 RRNA methyltransferase AviRa Peptidase_A24 PF01478.18 gi|150398940|ref|YP_001322707.1| - 1.4e-14 54.4 9.1 3.7e-14 53.0 9.1 1.7 1 1 0 1 1 1 1 Type IV leader peptidase family Arc_PepC_II PF06847.11 gi|150398940|ref|YP_001322707.1| - 1.1e-09 38.6 6.2 7e-09 36.1 0.2 3.1 3 0 0 3 3 3 1 Archaeal Peptidase A24 C-terminus Type II PAP2 PF01569.21 gi|150398940|ref|YP_001322707.1| - 0.62 9.8 5.5 1.4 8.7 3.2 2.1 2 0 0 2 2 2 0 PAP2 superfamily Pox_A14 PF05767.12 gi|150398940|ref|YP_001322707.1| - 5 7.4 8.4 1.5 9.0 0.2 3.1 2 1 1 3 3 3 0 Poxvirus virion envelope protein A14 TatD_DNase PF01026.21 gi|150398941|ref|YP_001322708.1| - 8.8e-25 87.5 0.0 1.1e-24 87.2 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase Y_Y_Y PF07495.13 gi|150398942|ref|YP_001322709.1| - 0.018 15.0 0.1 0.018 15.0 0.1 3.9 4 1 0 4 4 4 0 Y_Y_Y domain Dr_adhesin PF12393.8 gi|150398942|ref|YP_001322709.1| - 0.65 10.4 3.3 1.4 9.3 3.3 1.6 1 0 0 1 1 1 0 Dr family adhesin STT3_PglB_C PF18527.1 gi|150398942|ref|YP_001322709.1| - 6.5 6.9 8.9 7.1 6.8 0.0 3.4 4 0 0 4 4 4 0 STT3/PglB C-terminal beta-barrel domain CW_binding_2 PF04122.12 gi|150398943|ref|YP_001322710.1| - 9.9e-09 35.7 0.7 9.7e-05 23.0 0.4 3.2 2 0 0 2 2 2 2 Putative cell wall binding repeat 2 DUF4220 PF13968.6 gi|150398944|ref|YP_001322711.1| - 0.054 12.9 2.7 0.056 12.8 2.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) PRA1 PF03208.19 gi|150398944|ref|YP_001322711.1| - 0.44 10.2 6.4 0.51 10.0 6.4 1.1 1 0 0 1 1 1 0 PRA1 family protein Big_3_5 PF16640.5 gi|150398946|ref|YP_001322713.1| - 0.14 12.4 0.0 1.8 8.8 0.0 2.5 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 3) hGDE_N PF14699.6 gi|150398946|ref|YP_001322713.1| - 0.39 10.9 5.1 1.9 8.7 1.1 3.4 2 1 1 3 3 3 0 N-terminal domain from the human glycogen debranching enzyme DUF4350 PF14258.6 gi|150398947|ref|YP_001322714.1| - 5.8e-06 26.6 0.0 1.3e-05 25.5 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4350) ABC_transp_aux PF09822.9 gi|150398947|ref|YP_001322714.1| - 0.0027 17.2 0.0 0.0053 16.3 0.0 1.4 1 0 0 1 1 1 1 ABC-type uncharacterized transport system DUF58 PF01882.18 gi|150398948|ref|YP_001322715.1| - 9e-12 45.1 0.0 1.4e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 ERGIC_N PF13850.6 gi|150398948|ref|YP_001322715.1| - 0.097 13.0 1.6 0.89 9.9 0.3 2.5 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ORMDL PF04061.14 gi|150398949|ref|YP_001322716.1| - 4.4 7.1 15.1 59 3.5 14.9 2.4 1 1 0 1 1 1 0 ORMDL family DUF1616 PF07760.11 gi|150398950|ref|YP_001322717.1| - 6.9e-88 294.8 0.1 7.8e-88 294.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Sigma_reg_N PF13800.6 gi|150398950|ref|YP_001322717.1| - 0.18 12.1 0.1 0.18 12.1 0.1 4.8 3 1 3 6 6 6 0 Sigma factor regulator N-terminal DUF4131 PF13567.6 gi|150398950|ref|YP_001322717.1| - 0.3 10.7 5.3 3.4 7.3 3.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Bax1-I PF01027.20 gi|150398950|ref|YP_001322717.1| - 0.4 10.5 12.2 0.88 9.4 12.2 1.6 1 1 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DUF1129 PF06570.11 gi|150398950|ref|YP_001322717.1| - 5 6.6 13.5 11 5.5 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) Glycos_transf_2 PF00535.26 gi|150398951|ref|YP_001322718.1| - 1.2e-19 70.8 0.0 2e-19 70.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|150398951|ref|YP_001322718.1| - 0.0004 20.8 0.0 0.00052 20.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|150398951|ref|YP_001322718.1| - 0.00045 20.2 0.0 0.00066 19.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 MFS_2 PF13347.6 gi|150398951|ref|YP_001322718.1| - 0.042 12.4 1.6 0.058 12.0 1.6 1.1 1 0 0 1 1 1 0 MFS/sugar transport protein DUF354 PF04007.12 gi|150398952|ref|YP_001322719.1| - 1.9e-10 40.3 0.6 3e-10 39.7 0.4 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|150398952|ref|YP_001322719.1| - 4.8e-06 26.7 0.1 2.2e-05 24.5 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|150398952|ref|YP_001322719.1| - 5.9e-06 26.4 0.0 1.2e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_transf_28 PF03033.20 gi|150398952|ref|YP_001322719.1| - 0.0079 16.2 0.0 0.16 12.0 0.0 2.6 2 1 1 3 3 3 1 Glycosyltransferase family 28 N-terminal domain CSTF2_hinge PF14327.6 gi|150398952|ref|YP_001322719.1| - 0.23 11.9 0.3 0.72 10.3 0.0 1.9 2 0 0 2 2 2 0 Hinge domain of cleavage stimulation factor subunit 2 Epimerase_2 PF02350.19 gi|150398953|ref|YP_001322720.1| - 5.7e-116 387.2 0.0 6.7e-116 386.9 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.6 gi|150398953|ref|YP_001322720.1| - 0.012 15.7 0.0 0.038 14.0 0.0 1.9 1 1 1 2 2 2 0 Glycosyl transferase 4-like Glycos_transf_1 PF00534.20 gi|150398954|ref|YP_001322721.1| - 1e-43 148.8 0.2 2e-43 147.9 0.2 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|150398954|ref|YP_001322721.1| - 1.8e-29 102.9 0.0 3.8e-29 101.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|150398954|ref|YP_001322721.1| - 1.4e-15 57.7 0.0 2.2e-15 57.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|150398954|ref|YP_001322721.1| - 2.5e-07 30.8 4.2 8.8e-07 29.0 1.9 2.7 2 1 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.6 gi|150398954|ref|YP_001322721.1| - 9.3e-07 29.4 0.0 1.2e-06 29.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|150398954|ref|YP_001322721.1| - 0.009 16.4 0.0 0.017 15.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|150398956|ref|YP_001322723.1| - 1.1e-28 99.9 2.8 1.6e-28 99.4 1.0 2.1 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|150398956|ref|YP_001322723.1| - 3.9e-18 66.2 0.0 6.6e-18 65.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|150398956|ref|YP_001322723.1| - 3.9e-08 33.6 0.0 7.4e-08 32.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Polysacc_synt_3 PF13440.6 gi|150398957|ref|YP_001322724.1| - 2.1e-19 69.8 12.9 2.1e-19 69.8 12.9 1.8 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|150398957|ref|YP_001322724.1| - 6e-16 58.6 41.9 3.7e-15 56.1 23.7 2.0 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein MatE PF01554.18 gi|150398957|ref|YP_001322724.1| - 8.3e-05 22.3 26.0 0.00018 21.2 6.7 4.4 4 1 1 5 5 5 2 MatE UDPG_MGDP_dh_N PF03721.14 gi|150398958|ref|YP_001322725.1| - 3.9e-39 134.2 0.3 6.5e-39 133.4 0.3 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|150398958|ref|YP_001322725.1| - 1.2e-21 76.6 0.0 3.5e-21 75.2 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|150398958|ref|YP_001322725.1| - 2.5e-21 76.1 0.1 2.3e-20 72.9 0.0 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|150398958|ref|YP_001322725.1| - 1.2e-07 32.1 0.2 5.5e-07 29.9 0.0 2.2 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|150398958|ref|YP_001322725.1| - 1.4e-07 31.6 0.1 2.2e-05 24.5 0.1 2.5 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 gi|150398958|ref|YP_001322725.1| - 5.8e-06 26.3 0.0 1.2e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|150398958|ref|YP_001322725.1| - 0.099 12.9 0.4 1.4 9.2 0.0 2.7 3 0 0 3 3 3 0 TrkA-N domain GFO_IDH_MocA PF01408.22 gi|150398959|ref|YP_001322726.1| - 1.5e-28 100.0 0.0 2.9e-28 99.1 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|150398959|ref|YP_001322726.1| - 3.7e-08 33.4 0.0 3.1e-07 30.4 0.0 2.4 2 1 0 2 2 2 1 Oxidoreductase family, C-terminal alpha/beta domain F420_oxidored PF03807.17 gi|150398959|ref|YP_001322726.1| - 0.023 15.2 0.1 0.13 12.9 0.1 2.2 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|150398959|ref|YP_001322726.1| - 0.037 13.4 0.0 0.074 12.4 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|150398959|ref|YP_001322726.1| - 0.046 14.2 0.0 0.1 13.0 0.0 1.6 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain DegT_DnrJ_EryC1 PF01041.17 gi|150398960|ref|YP_001322727.1| - 1.5e-130 435.8 0.0 1.6e-130 435.6 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|150398960|ref|YP_001322727.1| - 1.1e-05 24.9 0.1 1.7e-05 24.3 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|150398960|ref|YP_001322727.1| - 4.7e-05 22.5 0.3 0.00036 19.6 0.1 1.9 2 0 0 2 2 2 1 Aminotransferase class-V SHMT PF00464.19 gi|150398960|ref|YP_001322727.1| - 0.008 14.8 0.1 0.016 13.9 0.1 1.5 1 1 0 1 1 1 1 Serine hydroxymethyltransferase S_100 PF01023.19 gi|150398960|ref|YP_001322727.1| - 0.12 12.1 0.1 0.37 10.5 0.1 1.8 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain Hexapep PF00132.24 gi|150398961|ref|YP_001322728.1| - 2.1e-22 77.9 19.7 8.1e-09 34.9 2.9 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|150398961|ref|YP_001322728.1| - 6.8e-13 48.1 20.4 1.3e-07 31.2 6.4 3.6 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase zf-UBR PF02207.20 gi|150398961|ref|YP_001322728.1| - 0.36 11.0 3.5 3.4 7.9 0.2 2.4 1 1 1 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Pro_CA PF00484.19 gi|150398962|ref|YP_001322729.1| - 3.7e-14 53.3 0.1 5e-13 49.6 0.1 2.0 1 1 0 1 1 1 1 Carbonic anhydrase DUF1889 PF08986.10 gi|150398962|ref|YP_001322729.1| - 0.13 12.7 0.0 0.25 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) Heme_oxygenase PF01126.20 gi|150398962|ref|YP_001322729.1| - 0.25 11.1 0.0 0.25 11.1 0.0 1.2 1 0 0 1 1 1 0 Heme oxygenase Zip PF02535.22 gi|150398963|ref|YP_001322730.1| - 2.2e-17 63.3 27.5 1e-10 41.4 11.7 2.1 1 1 1 2 2 2 2 ZIP Zinc transporter OCIA PF07051.11 gi|150398963|ref|YP_001322730.1| - 0.23 11.5 0.4 0.96 9.5 0.2 2.1 2 0 0 2 2 2 0 Ovarian carcinoma immunoreactive antigen (OCIA) Ferritin PF00210.24 gi|150398964|ref|YP_001322731.1| - 1.7e-18 66.9 0.0 2.1e-18 66.6 0.0 1.1 1 0 0 1 1 1 1 Ferritin-like domain Ferritin_2 PF13668.6 gi|150398964|ref|YP_001322731.1| - 0.0055 16.9 0.0 0.0071 16.5 0.0 1.1 1 0 0 1 1 1 1 Ferritin-like domain RsgI_N PF12791.7 gi|150398965|ref|YP_001322732.1| - 0.002 18.0 0.1 0.042 13.8 0.0 2.2 2 0 0 2 2 2 1 Anti-sigma factor N-terminus MC1 PF05854.11 gi|150398965|ref|YP_001322732.1| - 0.021 15.1 0.1 0.026 14.8 0.1 1.1 1 0 0 1 1 1 0 Non-histone chromosomal protein MC1 Peptidase_M50B PF13398.6 gi|150398965|ref|YP_001322732.1| - 0.022 14.4 0.4 0.027 14.1 0.4 1.1 1 0 0 1 1 1 0 Peptidase M50B-like DUF4282 PF14110.6 gi|150398965|ref|YP_001322732.1| - 1.4 9.7 7.8 2.1 9.1 7.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) RseC_MucC PF04246.12 gi|150398965|ref|YP_001322732.1| - 1.7 8.6 3.4 2.9 7.9 3.4 1.4 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Whi5 PF08528.11 gi|150398965|ref|YP_001322732.1| - 4.6 7.0 5.6 4 7.1 0.3 2.4 2 0 0 2 2 2 0 Whi5 like Asn_synthase PF00733.21 gi|150398966|ref|YP_001322733.1| - 3e-58 198.2 0.2 1.7e-31 110.2 0.1 2.1 1 1 1 2 2 2 2 Asparagine synthase GATase_6 PF13522.6 gi|150398966|ref|YP_001322733.1| - 1e-31 109.9 0.0 1.9e-31 109.0 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|150398966|ref|YP_001322733.1| - 5.8e-31 107.0 0.0 1.5e-30 105.7 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase domain DUF2073 PF09846.9 gi|150398966|ref|YP_001322733.1| - 0.1 12.5 0.0 0.27 11.1 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2073) DHODB_Fe-S_bind PF10418.9 gi|150398967|ref|YP_001322734.1| - 4.8e-13 48.7 4.4 9.1e-13 47.8 3.8 1.8 2 0 0 2 2 2 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|150398967|ref|YP_001322734.1| - 5.8e-06 26.9 0.1 2.3e-05 25.0 0.1 1.9 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Fer2_3 PF13085.6 gi|150398967|ref|YP_001322734.1| - 0.022 14.8 0.5 0.037 14.1 0.5 1.3 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 gi|150398967|ref|YP_001322734.1| - 0.056 13.8 0.0 0.11 12.8 0.0 1.6 1 1 0 1 1 1 0 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 gi|150398967|ref|YP_001322734.1| - 0.056 13.6 0.7 5.7 7.0 0.5 2.3 2 0 0 2 2 2 0 Ferric reductase NAD binding domain AdoHcyase PF05221.17 gi|150398968|ref|YP_001322735.1| - 1.7e-63 214.6 0.0 9.4e-35 120.2 0.1 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|150398968|ref|YP_001322735.1| - 2e-54 184.0 3.2 3.2e-54 183.4 1.3 2.0 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|150398968|ref|YP_001322735.1| - 1.5e-09 37.4 0.3 9.1e-09 34.9 0.2 2.1 2 1 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|150398968|ref|YP_001322735.1| - 1.8e-06 27.6 0.0 4e-06 26.5 0.0 1.6 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain F420_oxidored PF03807.17 gi|150398968|ref|YP_001322735.1| - 0.017 15.7 0.4 0.13 12.8 0.1 2.4 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 gi|150398968|ref|YP_001322735.1| - 0.028 14.7 0.0 0.078 13.2 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain 3HCDH_N PF02737.18 gi|150398968|ref|YP_001322735.1| - 0.1 12.5 0.4 0.53 10.1 0.2 2.3 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rpr2 PF04032.16 gi|150398969|ref|YP_001322736.1| - 7.7e-16 58.2 2.8 1e-15 57.8 2.8 1.1 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain ADK_lid PF05191.14 gi|150398969|ref|YP_001322736.1| - 0.052 13.5 1.9 0.6 10.1 0.2 2.4 2 0 0 2 2 2 0 Adenylate kinase, active site lid FPRL1_inhibitor PF16104.5 gi|150398969|ref|YP_001322736.1| - 0.12 12.5 0.9 0.2 11.8 0.9 1.4 1 0 0 1 1 1 0 Formyl peptide receptor-like 1 inhibitory protein DUF1664 PF07889.12 gi|150398970|ref|YP_001322737.1| - 0.011 15.7 1.8 0.011 15.7 1.8 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) YtxH PF12732.7 gi|150398970|ref|YP_001322737.1| - 0.68 10.5 4.2 1e+02 3.5 4.2 3.3 1 1 0 1 1 1 0 YtxH-like protein EIF_2_alpha PF07541.12 gi|150398970|ref|YP_001322737.1| - 0.82 9.8 9.4 0.54 10.4 4.5 2.5 2 1 0 2 2 2 0 Eukaryotic translation initiation factor 2 alpha subunit KxDL PF10241.9 gi|150398970|ref|YP_001322737.1| - 3.3 8.1 10.5 0.91 9.9 0.3 3.5 2 2 1 4 4 4 0 Uncharacterized conserved protein DapB_C PF05173.14 gi|150398971|ref|YP_001322738.1| - 1.9e-40 137.6 0.1 2.7e-40 137.1 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 gi|150398971|ref|YP_001322738.1| - 5.9e-35 120.1 1.1 1.1e-34 119.2 1.1 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 3Beta_HSD PF01073.19 gi|150398971|ref|YP_001322738.1| - 0.012 14.6 0.1 0.017 14.1 0.1 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Gp_dh_N PF00044.24 gi|150398971|ref|YP_001322738.1| - 0.32 11.4 2.1 2.4 8.5 1.3 2.7 2 1 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Methyltrn_RNA_2 PF04013.12 gi|150398972|ref|YP_001322739.1| - 6.1e-66 221.9 0.0 6.8e-66 221.8 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase CheW PF01584.19 gi|150398973|ref|YP_001322740.1| - 2.6e-32 111.4 1.5 2.8e-32 111.2 1.5 1.0 1 0 0 1 1 1 1 CheW-like domain SPA PF08616.10 gi|150398973|ref|YP_001322740.1| - 0.079 12.9 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Stabilization of polarity axis CheB_methylest PF01339.17 gi|150398974|ref|YP_001322741.1| - 1.4e-56 190.9 0.9 9.7e-56 188.1 0.1 2.3 2 1 0 2 2 2 1 CheB methylesterase Response_reg PF00072.24 gi|150398974|ref|YP_001322741.1| - 4.2e-26 91.3 2.0 1e-24 86.8 0.9 2.8 2 1 0 2 2 2 1 Response regulator receiver domain DXP_reductoisom PF02670.16 gi|150398974|ref|YP_001322741.1| - 0.02 15.6 0.5 0.16 12.7 0.2 2.4 2 0 0 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase TOC159_MAD PF11886.8 gi|150398974|ref|YP_001322741.1| - 0.063 12.2 0.0 0.12 11.3 0.0 1.3 1 0 0 1 1 1 0 Translocase of chloroplast 159/132, membrane anchor domain Peptidase_M73 PF12389.8 gi|150398974|ref|YP_001322741.1| - 0.075 12.9 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 Camelysin metallo-endopeptidase DUF765 PF05570.11 gi|150398974|ref|YP_001322741.1| - 5.7 7.2 5.5 0.78 10.0 0.9 1.9 2 0 0 2 2 2 0 Circovirus protein of unknown function (DUF765) P2 PF07194.11 gi|150398975|ref|YP_001322742.1| - 3e-30 104.1 10.9 1.2e-19 70.2 1.1 4.2 2 1 1 3 3 3 2 P2 response regulator binding domain CheW PF01584.19 gi|150398975|ref|YP_001322742.1| - 1.8e-22 79.4 1.9 2.4e-22 79.0 1.0 1.7 2 0 0 2 2 2 1 CheW-like domain Hpt PF01627.23 gi|150398975|ref|YP_001322742.1| - 9.7e-20 70.6 0.2 4.3e-19 68.6 0.1 2.2 2 0 0 2 2 2 1 Hpt domain H-kinase_dim PF02895.14 gi|150398975|ref|YP_001322742.1| - 3.4e-16 59.4 2.1 3.4e-16 59.4 2.1 2.9 3 0 0 3 3 3 1 Signal transducing histidine kinase, homodimeric domain HATPase_c PF02518.26 gi|150398975|ref|YP_001322742.1| - 5.9e-16 59.0 2.0 1.2e-15 58.0 0.4 2.5 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|150398975|ref|YP_001322742.1| - 0.0048 16.7 0.1 0.017 15.0 0.1 2.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Not1 PF04054.15 gi|150398975|ref|YP_001322742.1| - 0.078 11.9 8.6 0.1 11.5 0.6 2.8 2 0 0 2 2 2 0 CCR4-Not complex component, Not1 YqgF PF14639.6 gi|150398975|ref|YP_001322742.1| - 2.9 7.7 17.6 0.24 11.2 2.7 3.6 3 0 0 3 3 3 0 Holliday-junction resolvase-like of SPT6 CheD PF03975.13 gi|150398976|ref|YP_001322743.1| - 5.1e-33 113.4 0.1 6.2e-33 113.1 0.1 1.1 1 0 0 1 1 1 1 CheD chemotactic sensory transduction MCPsignal PF00015.21 gi|150398977|ref|YP_001322744.1| - 7.6e-38 130.0 46.4 8.6e-33 113.6 20.7 4.0 1 1 3 4 4 4 4 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF948 PF06103.11 gi|150398977|ref|YP_001322744.1| - 2.2e-05 24.6 35.7 0.51 10.6 0.5 6.5 1 1 5 6 6 6 4 Bacterial protein of unknown function (DUF948) Collagen_mid PF15984.5 gi|150398977|ref|YP_001322744.1| - 0.003 17.3 3.7 0.003 17.3 3.7 2.4 1 1 1 2 2 2 1 Bacterial collagen, middle region Arfaptin PF06456.13 gi|150398977|ref|YP_001322744.1| - 0.0042 16.7 3.6 0.0042 16.7 3.6 4.1 1 1 2 4 4 4 1 Arfaptin-like domain Leu_zip PF15294.6 gi|150398977|ref|YP_001322744.1| - 0.0062 16.1 27.3 0.0064 16.0 15.7 2.4 2 0 0 2 2 2 1 Leucine zipper Fib_alpha PF08702.10 gi|150398977|ref|YP_001322744.1| - 0.0099 16.1 5.2 0.0099 16.1 5.2 4.8 1 1 4 5 5 5 1 Fibrinogen alpha/beta chain family HSR PF03172.13 gi|150398977|ref|YP_001322744.1| - 0.012 15.7 0.2 0.012 15.7 0.2 2.7 4 0 0 4 4 3 0 HSR domain DUF1664 PF07889.12 gi|150398977|ref|YP_001322744.1| - 0.017 15.2 38.2 0.15 12.1 1.9 5.7 2 2 2 4 4 4 0 Protein of unknown function (DUF1664) WXG100 PF06013.12 gi|150398977|ref|YP_001322744.1| - 0.046 13.9 17.7 9 6.6 5.5 5.6 2 2 2 4 4 4 0 Proteins of 100 residues with WXG PRKG1_interact PF15898.5 gi|150398977|ref|YP_001322744.1| - 0.053 14.4 1.3 0.053 14.4 1.3 4.2 2 1 2 4 4 4 0 cGMP-dependent protein kinase interacting domain Mating_N PF12731.7 gi|150398977|ref|YP_001322744.1| - 0.065 13.3 0.5 0.065 13.3 0.5 3.0 4 1 0 4 4 3 0 Mating-type protein beta 1 YscO PF07321.12 gi|150398977|ref|YP_001322744.1| - 0.21 11.5 17.8 0.049 13.6 1.8 3.6 2 1 1 3 3 3 0 Type III secretion protein YscO DUF4559 PF15112.6 gi|150398977|ref|YP_001322744.1| - 1 9.0 25.5 0.069 12.8 4.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4559) Tweety PF04906.13 gi|150398977|ref|YP_001322744.1| - 1.1 7.8 17.2 0.048 12.3 1.4 3.3 2 1 1 3 3 3 0 Tweety Sre PF03125.18 gi|150398977|ref|YP_001322744.1| - 1.2 8.2 5.8 2.7 7.1 5.8 1.5 1 0 0 1 1 1 0 C. elegans Sre G protein-coupled chemoreceptor FlgN PF05130.12 gi|150398977|ref|YP_001322744.1| - 1.3 9.5 24.7 1.7 9.2 0.8 3.9 2 1 2 4 4 4 0 FlgN protein Laminin_II PF06009.12 gi|150398977|ref|YP_001322744.1| - 2.1 8.3 41.7 15 5.6 13.1 5.1 2 2 1 3 3 3 0 Laminin Domain II DUF4715 PF15835.5 gi|150398977|ref|YP_001322744.1| - 2.2 8.4 6.9 7.4 6.6 0.9 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4715) Laminin_I PF06008.14 gi|150398977|ref|YP_001322744.1| - 2.7 7.6 39.9 0.43 10.2 2.9 4.0 1 1 3 4 4 4 0 Laminin Domain I IFT57 PF10498.9 gi|150398977|ref|YP_001322744.1| - 3.8 6.4 31.1 0.025 13.6 7.1 4.0 2 2 1 3 3 3 0 Intra-flagellar transport protein 57 NPV_P10 PF05531.12 gi|150398977|ref|YP_001322744.1| - 3.9 8.0 28.9 4.5 7.8 3.7 5.5 2 2 1 4 4 4 0 Nucleopolyhedrovirus P10 protein SlyX PF04102.12 gi|150398977|ref|YP_001322744.1| - 6.5 7.5 6.9 4.2 8.1 0.8 3.5 3 1 0 3 3 3 0 SlyX GARP PF16731.5 gi|150398977|ref|YP_001322744.1| - 9 5.9 47.0 0.3 10.8 10.4 4.3 3 1 1 4 4 4 0 Glutamic acid/alanine-rich protein of Trypanosoma Mce4_CUP1 PF11887.8 gi|150398977|ref|YP_001322744.1| - 9.6 5.6 11.8 3.3 7.1 5.2 2.9 2 1 0 2 2 2 0 Cholesterol uptake porter CUP1 of Mce4, putative LRR_5 PF13306.6 gi|150398978|ref|YP_001322745.1| - 9.2e-10 38.6 1.2 1.4e-09 38.0 1.0 1.4 1 1 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) Cpn60_TCP1 PF00118.24 gi|150398979|ref|YP_001322746.1| - 7e-101 338.3 23.3 1e-100 337.8 23.3 1.2 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family SurA_N PF09312.11 gi|150398979|ref|YP_001322746.1| - 9.1 6.4 8.1 1.7 8.8 0.1 3.7 4 1 1 5 5 5 0 SurA N-terminal domain Cpn10 PF00166.21 gi|150398980|ref|YP_001322747.1| - 6.3e-24 83.9 0.8 7e-24 83.7 0.8 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Cas_Cas4 PF01930.17 gi|150398981|ref|YP_001322748.1| - 8.8e-14 51.9 11.7 1.3e-13 51.3 11.7 1.3 1 1 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|150398981|ref|YP_001322748.1| - 1.9e-07 31.2 1.6 3.8e-07 30.3 1.6 1.4 1 1 1 2 2 2 1 PD-(D/E)XK nuclease superfamily CRISPR_Cas2 PF09827.9 gi|150398982|ref|YP_001322749.1| - 1.4e-21 76.4 0.2 1.7e-21 76.2 0.2 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Cas_Cas1 PF01867.16 gi|150398983|ref|YP_001322750.1| - 1.4e-74 250.8 0.7 1.6e-74 250.6 0.7 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 Ydc2-catalyt PF09159.10 gi|150398983|ref|YP_001322750.1| - 0.012 15.4 0.3 0.016 14.9 0.3 1.3 1 0 0 1 1 1 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 TypeIII_RM_meth PF12564.8 gi|150398983|ref|YP_001322750.1| - 0.028 14.5 1.1 0.028 14.5 1.1 2.4 3 0 0 3 3 3 0 Type III restriction/modification enzyme methylation subunit Cas_TM1802 PF09484.10 gi|150398984|ref|YP_001322751.1| - 1.4e-35 123.2 35.3 3.9e-35 121.7 35.3 1.6 1 1 0 1 1 1 1 CRISPR-associated protein TM1802 (cas_TM1802) PADR1 PF08063.12 gi|150398984|ref|YP_001322751.1| - 2 8.2 5.6 0.3 10.9 1.3 1.9 2 0 0 2 2 2 0 PADR1 (NUC008) domain Cas_Cas7 PF05107.12 gi|150398985|ref|YP_001322752.1| - 7.1e-52 176.5 0.8 9.4e-52 176.1 0.8 1.2 1 0 0 1 1 1 1 CRISPR-associated protein Cas7 Cas_Cas5d PF09704.10 gi|150398986|ref|YP_001322753.1| - 0.0059 16.5 0.0 0.0064 16.4 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) Helicase_C PF00271.31 gi|150398987|ref|YP_001322754.1| - 7.1e-10 39.2 0.2 6.8e-09 36.1 0.2 2.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|150398987|ref|YP_001322754.1| - 6.6e-09 35.8 0.0 2.2e-08 34.1 0.0 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|150398987|ref|YP_001322754.1| - 1e-08 35.4 1.9 1e-08 35.4 1.9 3.2 4 0 0 4 4 4 1 Type III restriction enzyme, res subunit PhoH PF02562.16 gi|150398987|ref|YP_001322754.1| - 1.2e-05 24.9 0.0 0.11 12.0 0.0 2.6 2 0 0 2 2 2 2 PhoH-like protein HD PF01966.22 gi|150398987|ref|YP_001322754.1| - 0.00065 19.9 0.7 0.049 13.8 0.1 2.8 2 1 0 2 2 2 1 HD domain Borrelia_P13 PF05628.12 gi|150398987|ref|YP_001322754.1| - 0.0011 19.0 0.2 0.0028 17.6 0.2 1.7 1 0 0 1 1 1 1 Borrelia membrane protein P13 HD_6 PF18019.1 gi|150398987|ref|YP_001322754.1| - 0.0019 18.3 0.1 0.0035 17.5 0.1 1.4 1 0 0 1 1 1 1 HD domain AAA_22 PF13401.6 gi|150398987|ref|YP_001322754.1| - 0.0059 16.9 1.0 0.13 12.5 0.1 3.3 3 1 0 3 3 3 1 AAA domain Mem_trans PF03547.18 gi|150398987|ref|YP_001322754.1| - 0.029 12.8 0.3 0.046 12.1 0.3 1.2 1 0 0 1 1 1 0 Membrane transport protein DUF3903 PF13043.6 gi|150398987|ref|YP_001322754.1| - 0.25 11.1 0.8 0.78 9.5 0.6 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3903) Cas6b_C PF17262.2 gi|150398988|ref|YP_001322755.1| - 1.1e-42 144.7 0.8 2.1e-42 143.8 0.8 1.5 1 0 0 1 1 1 1 Cas6b C-terminal domain Cas6b_N PF17955.1 gi|150398988|ref|YP_001322755.1| - 7.9e-28 96.6 1.6 7.9e-28 96.6 1.6 1.9 3 0 0 3 3 3 1 Cas6b N-terminal domain DASH_Dam1 PF08653.10 gi|150398989|ref|YP_001322756.1| - 0.074 12.9 0.3 0.43 10.4 0.1 1.9 2 0 0 2 2 2 0 DASH complex subunit Dam1 DUF2205 PF10224.9 gi|150398989|ref|YP_001322756.1| - 0.11 12.5 0.1 0.14 12.1 0.1 1.3 1 1 0 1 1 1 0 Short coiled-coil protein TP_methylase PF00590.20 gi|150398990|ref|YP_001322757.1| - 3.5e-29 102.3 0.0 4.5e-29 101.9 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases EFP_N PF08207.12 gi|150398991|ref|YP_001322758.1| - 1.1e-06 28.6 0.3 3.1e-05 23.9 0.1 2.2 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain eIF-5a PF01287.20 gi|150398991|ref|YP_001322758.1| - 0.00048 20.2 0.4 0.0013 18.8 0.4 1.7 1 1 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold DUF1609 PF07753.11 gi|150398991|ref|YP_001322758.1| - 0.024 14.2 0.1 0.031 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1609) EFP PF01132.20 gi|150398991|ref|YP_001322758.1| - 0.052 13.6 0.0 0.094 12.8 0.0 1.5 1 0 0 1 1 1 0 Elongation factor P (EF-P) OB domain ATP-synt_ab_N PF02874.23 gi|150398991|ref|YP_001322758.1| - 0.072 13.6 0.6 1.6 9.3 0.6 2.5 1 1 0 1 1 1 0 ATP synthase alpha/beta family, beta-barrel domain CobD_Cbib PF03186.13 gi|150398992|ref|YP_001322759.1| - 1.4e-81 273.7 0.0 1.7e-81 273.4 0.0 1.0 1 0 0 1 1 1 1 CobD/Cbib protein DUF530 PF04409.12 gi|150398993|ref|YP_001322760.1| - 2.4e-95 319.9 33.8 7.4e-59 199.5 29.5 3.6 1 1 1 2 2 2 2 Protein of unknown function (DUF530) ENT PF03735.14 gi|150398993|ref|YP_001322760.1| - 0.0014 18.6 0.4 0.039 14.0 0.0 2.8 2 0 0 2 2 2 1 ENT domain tRNA_NucTransf2 PF09249.11 gi|150398994|ref|YP_001322761.1| - 1.1e-41 141.6 0.3 3.4e-41 140.0 0.3 1.8 2 0 0 2 2 2 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|150398994|ref|YP_001322761.1| - 2e-12 47.2 0.1 6.5e-12 45.6 0.1 1.9 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|150398994|ref|YP_001322761.1| - 0.00077 19.7 0.1 0.0043 17.2 0.0 2.3 2 1 0 2 2 2 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain UPF0058 PF01893.16 gi|150398995|ref|YP_001322762.1| - 3.9e-30 104.0 0.7 5.8e-30 103.4 0.7 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 HisG PF01634.18 gi|150398996|ref|YP_001322763.1| - 6.7e-52 175.7 0.1 9.8e-52 175.1 0.1 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|150398996|ref|YP_001322763.1| - 7e-26 90.2 0.1 1.3e-25 89.3 0.1 1.5 1 0 0 1 1 1 1 HisG, C-terminal domain Methyltransf_18 PF12847.7 gi|150398996|ref|YP_001322763.1| - 0.029 14.3 0.1 0.085 12.8 0.1 1.7 1 1 0 1 1 1 0 Methyltransferase domain GatB_N PF02934.15 gi|150398997|ref|YP_001322764.1| - 2e-89 299.6 0.0 3e-89 299.0 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|150398997|ref|YP_001322764.1| - 2.4e-42 144.3 3.5 3.7e-42 143.7 3.5 1.3 1 0 0 1 1 1 1 GatB domain ComA PF02679.15 gi|150398997|ref|YP_001322764.1| - 0.017 14.6 0.7 0.028 13.9 0.7 1.3 1 0 0 1 1 1 0 (2R)-phospho-3-sulfolactate synthase (ComA) His_kinase PF06580.13 gi|150398997|ref|YP_001322764.1| - 0.04 14.2 0.3 2.3 8.6 0.0 3.2 2 1 2 4 4 4 0 Histidine kinase AFOR_N PF02730.15 gi|150398998|ref|YP_001322765.1| - 4.2e-23 82.3 0.0 6.7e-23 81.6 0.0 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain AFOR_C PF01314.18 gi|150398998|ref|YP_001322765.1| - 1.9e-18 66.7 0.0 3.1e-18 65.9 0.0 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AI-2E_transport PF01594.16 gi|150398999|ref|YP_001322766.1| - 2.7e-43 148.4 35.4 3.8e-43 147.9 35.4 1.1 1 0 0 1 1 1 1 AI-2E family transporter CTP_transf_like PF01467.26 gi|150399000|ref|YP_001322767.1| - 1.1e-17 64.6 0.0 1.3e-17 64.4 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|150399000|ref|YP_001322767.1| - 0.014 15.3 0.1 0.026 14.4 0.1 1.5 1 1 0 1 1 1 0 FAD synthetase DUF1884 PF08967.10 gi|150399000|ref|YP_001322767.1| - 0.061 13.6 0.1 0.15 12.3 0.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF1884) TauE PF01925.19 gi|150399001|ref|YP_001322768.1| - 1.1e-47 162.7 23.5 1.3e-47 162.5 23.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Deltameth_res PF16020.5 gi|150399001|ref|YP_001322768.1| - 0.0052 16.6 5.9 0.53 10.2 0.2 3.7 3 0 0 3 3 3 2 Deltamethrin resistance PAPS_reduct PF01507.19 gi|150399002|ref|YP_001322769.1| - 6.6e-40 137.0 0.0 1e-39 136.3 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.20 gi|150399002|ref|YP_001322769.1| - 2.4e-10 40.2 0.1 4.7e-10 39.3 0.1 1.5 1 0 0 1 1 1 1 PUA domain Ehbp PF10622.9 gi|150399003|ref|YP_001322770.1| - 8.7e-39 131.4 0.4 1e-38 131.2 0.4 1.0 1 0 0 1 1 1 1 Energy-converting hydrogenase B subunit P (EhbP) HAD_2 PF13419.6 gi|150399004|ref|YP_001322771.1| - 1.8e-31 109.6 0.1 2.3e-31 109.2 0.1 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|150399004|ref|YP_001322771.1| - 7.2e-16 59.1 0.0 1.2e-15 58.4 0.0 1.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|150399004|ref|YP_001322771.1| - 2.3e-12 46.8 0.0 4.2e-12 45.9 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|150399004|ref|YP_001322771.1| - 0.00064 20.2 0.0 0.00083 19.8 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 gi|150399004|ref|YP_001322771.1| - 0.0091 15.7 0.0 4.3 7.0 0.0 2.3 2 0 0 2 2 2 2 Polynucleotide kinase 3 phosphatase KCNQ_channel PF03520.14 gi|150399004|ref|YP_001322771.1| - 0.028 14.2 0.0 0.2 11.5 0.0 1.9 2 0 0 2 2 2 0 KCNQ voltage-gated potassium channel PGP_phosphatase PF09419.10 gi|150399004|ref|YP_001322771.1| - 0.059 13.0 0.0 0.73 9.4 0.0 2.1 2 0 0 2 2 2 0 Mitochondrial PGP phosphatase CobS PF02654.15 gi|150399005|ref|YP_001322772.1| - 1.2e-36 126.9 11.3 1.4e-36 126.7 11.3 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase F420_ligase PF01996.16 gi|150399006|ref|YP_001322773.1| - 4.5e-55 186.6 1.6 5.1e-55 186.5 1.6 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase DUF2294 PF10057.9 gi|150399006|ref|YP_001322773.1| - 0.065 13.4 0.5 6.7 6.9 0.1 3.1 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2294) Shikimate_dh_N PF08501.11 gi|150399007|ref|YP_001322774.1| - 9.9e-30 102.6 0.1 2.1e-29 101.6 0.1 1.6 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|150399007|ref|YP_001322774.1| - 1.1e-14 53.9 0.0 2e-14 53.0 0.0 1.5 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|150399007|ref|YP_001322774.1| - 6.3e-08 32.8 0.1 1.7e-07 31.4 0.0 1.7 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_5 PF07994.12 gi|150399007|ref|YP_001322774.1| - 0.023 14.1 0.1 0.031 13.7 0.1 1.3 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase Sacchrp_dh_NADP PF03435.18 gi|150399007|ref|YP_001322774.1| - 0.03 14.6 0.0 0.051 13.8 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain UPF0254 PF06787.11 gi|150399008|ref|YP_001322775.1| - 4.8e-57 192.3 0.9 5.4e-57 192.1 0.9 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0254) CheF-arch PF04283.12 gi|150399009|ref|YP_001322776.1| - 2.5e-58 197.4 0.5 3.5e-58 196.9 0.5 1.1 1 0 0 1 1 1 1 Chemotaxis signal transduction system protein F from archaea PCI PF01399.27 gi|150399009|ref|YP_001322776.1| - 0.15 12.6 2.7 0.54 10.8 0.0 2.6 2 1 0 3 3 3 0 PCI domain DUF3622 PF12286.8 gi|150399009|ref|YP_001322776.1| - 0.17 12.3 0.1 3 8.3 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3622) Response_reg PF00072.24 gi|150399010|ref|YP_001322777.1| - 3.8e-31 107.6 0.6 4.2e-31 107.4 0.6 1.0 1 0 0 1 1 1 1 Response regulator receiver domain DUF3798 PF12683.7 gi|150399010|ref|YP_001322777.1| - 0.004 16.6 1.2 0.12 11.7 0.1 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3798) FAS_meander PF17951.1 gi|150399010|ref|YP_001322777.1| - 0.015 15.1 0.3 0.018 14.8 0.3 1.2 1 1 0 1 1 1 0 Fatty acid synthase meander beta sheet domain IMPDH PF00478.25 gi|150399010|ref|YP_001322777.1| - 0.05 12.6 0.5 0.055 12.5 0.5 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Glyco_tran_WecB PF03808.13 gi|150399010|ref|YP_001322777.1| - 0.087 12.8 0.0 1.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family PA PF02225.22 gi|150399010|ref|YP_001322777.1| - 0.099 12.7 0.1 0.2 11.7 0.1 1.7 1 1 1 2 2 2 0 PA domain CheX PF13690.6 gi|150399011|ref|YP_001322778.1| - 1.1e-08 35.1 0.7 2.3e-08 34.1 0.7 1.5 1 0 0 1 1 1 1 Chemotaxis phosphatase CheX DUF3334 PF11813.8 gi|150399011|ref|YP_001322778.1| - 0.00091 19.0 0.6 0.0013 18.5 0.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3334) CheC PF04509.12 gi|150399011|ref|YP_001322778.1| - 0.0031 17.4 0.6 0.0092 15.9 0.6 1.9 1 0 0 1 1 1 1 CheC-like family TRAM PF01938.20 gi|150399011|ref|YP_001322778.1| - 0.11 12.5 0.1 0.45 10.5 0.0 1.9 2 0 0 2 2 2 0 TRAM domain Flagellar_put PF12611.8 gi|150399011|ref|YP_001322778.1| - 0.2 11.5 2.9 3.1 7.7 0.5 2.9 3 0 0 3 3 3 0 Putative flagellar CheC PF04509.12 gi|150399012|ref|YP_001322779.1| - 2e-06 27.6 1.1 3.1e-06 27.0 0.5 1.7 2 0 0 2 2 2 1 CheC-like family FliM PF02154.15 gi|150399012|ref|YP_001322779.1| - 0.013 15.4 0.2 0.023 14.6 0.2 1.4 1 1 0 1 1 1 0 Flagellar motor switch protein FliM CheX PF13690.6 gi|150399012|ref|YP_001322779.1| - 0.015 15.4 0.4 0.034 14.3 0.4 1.6 1 1 0 1 1 1 0 Chemotaxis phosphatase CheX CheR PF01739.18 gi|150399013|ref|YP_001322780.1| - 3.2e-55 186.6 0.5 4e-55 186.3 0.5 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.15 gi|150399013|ref|YP_001322780.1| - 1.1e-11 44.3 1.1 2.3e-11 43.2 1.1 1.5 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_12 PF08242.12 gi|150399013|ref|YP_001322780.1| - 0.011 16.4 0.2 0.074 13.8 0.2 2.1 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 gi|150399013|ref|YP_001322780.1| - 0.029 14.2 0.0 0.04 13.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DUF1367 PF07105.11 gi|150399013|ref|YP_001322780.1| - 0.06 13.0 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1367) Lipase_3 PF01764.25 gi|150399013|ref|YP_001322780.1| - 0.18 11.7 0.3 8.5 6.2 0.2 2.4 1 1 1 2 2 2 0 Lipase (class 3) DUF2283 PF10049.9 gi|150399014|ref|YP_001322781.1| - 1.1e-05 25.5 3.3 4.5e-05 23.6 3.3 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2283) FMN_bind PF04205.14 gi|150399014|ref|YP_001322781.1| - 0.079 13.5 0.2 0.13 12.9 0.2 1.4 1 0 0 1 1 1 0 FMN-binding domain Phage_integrase PF00589.22 gi|150399015|ref|YP_001322782.1| - 8.4e-06 25.7 0.1 9.3e-06 25.5 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family Phage_integrase PF00589.22 gi|150399016|ref|YP_001322783.1| - 7.7e-36 123.5 0.2 3.6e-35 121.3 0.0 2.0 1 1 2 3 3 3 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|150399016|ref|YP_001322783.1| - 1.1e-12 48.2 2.0 1.1e-12 48.2 2.0 2.2 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|150399016|ref|YP_001322783.1| - 1.2e-05 25.5 3.4 0.0028 17.9 0.2 2.5 1 1 2 3 3 3 2 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 gi|150399016|ref|YP_001322783.1| - 0.00046 20.5 4.4 0.00046 20.5 4.4 2.8 2 2 0 2 2 2 1 Phage integrase SAM-like domain N6_Mtase PF02384.16 gi|150399017|ref|YP_001322784.1| - 2.7e-57 194.4 0.1 4.3e-57 193.8 0.1 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|150399017|ref|YP_001322784.1| - 8.2e-22 78.3 0.0 2e-21 77.1 0.0 1.6 1 0 0 1 1 1 1 HsdM N-terminal domain Eco57I PF07669.11 gi|150399017|ref|YP_001322784.1| - 0.02 15.4 0.0 0.066 13.7 0.0 1.9 1 1 0 1 1 1 0 Eco57I restriction-modification methylase NCBP3 PF10309.9 gi|150399017|ref|YP_001322784.1| - 0.14 12.1 0.2 8.8 6.3 0.0 2.5 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 Methylase_S PF01420.19 gi|150399018|ref|YP_001322785.1| - 8.6e-25 87.9 5.0 8.1e-17 61.9 0.5 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain UPF0242 PF06785.11 gi|150399018|ref|YP_001322785.1| - 0.00047 20.3 4.8 0.0072 16.5 2.6 2.2 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus Med2 PF11214.8 gi|150399018|ref|YP_001322785.1| - 0.027 14.6 1.0 1.3 9.2 0.2 2.2 2 0 0 2 2 2 0 Mediator complex subunit 2 NPV_P10 PF05531.12 gi|150399018|ref|YP_001322785.1| - 0.027 14.9 2.1 3.3 8.2 0.1 2.5 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Elf4 PF07011.11 gi|150399018|ref|YP_001322785.1| - 0.061 13.2 0.6 16 5.5 0.1 2.6 2 0 0 2 2 2 0 Early Flowering 4 domain MerR-DNA-bind PF09278.11 gi|150399018|ref|YP_001322785.1| - 0.23 12.0 1.7 0.42 11.2 0.1 2.0 2 0 0 2 2 2 0 MerR, DNA binding BLOC1_2 PF10046.9 gi|150399018|ref|YP_001322785.1| - 0.82 10.0 5.3 2.1 8.7 0.7 2.5 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SWI2_SNF2 PF18766.1 gi|150399019|ref|YP_001322786.1| - 3.4e-26 92.3 6.8 1.8e-25 89.9 5.8 2.5 2 1 0 2 2 2 1 SWI2/SNF2 ATPase ResIII PF04851.15 gi|150399019|ref|YP_001322786.1| - 2.1e-13 50.6 6.9 4.6e-13 49.5 3.1 3.0 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit HSDR_N PF04313.14 gi|150399019|ref|YP_001322786.1| - 4.7e-11 43.0 1.4 1.4e-10 41.5 0.4 2.4 2 0 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.29 gi|150399019|ref|YP_001322786.1| - 9.8e-11 41.7 1.5 1.8e-06 27.8 0.5 3.0 2 1 0 2 2 2 2 DEAD/DEAH box helicase EVE PF01878.18 gi|150399020|ref|YP_001322787.1| - 3.9e-20 72.3 0.1 4.3e-20 72.2 0.1 1.0 1 0 0 1 1 1 1 EVE domain Dev_Cell_Death PF10539.9 gi|150399020|ref|YP_001322787.1| - 0.0081 16.0 0.0 0.02 14.7 0.0 1.8 1 1 0 1 1 1 1 Development and cell death domain MCM PF00493.23 gi|150399021|ref|YP_001322788.1| - 2e-54 184.1 0.0 3e-54 183.5 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|150399021|ref|YP_001322788.1| - 2.3e-11 43.6 0.1 4.6e-11 42.7 0.1 1.5 1 0 0 1 1 1 1 MCM OB domain Mg_chelatase PF01078.21 gi|150399021|ref|YP_001322788.1| - 5.4e-10 39.0 0.0 2.4e-08 33.6 0.0 2.7 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI Peptidase_C39_2 PF13529.6 gi|150399021|ref|YP_001322788.1| - 0.00015 22.4 0.2 0.009 16.6 0.0 2.6 1 1 1 2 2 2 1 Peptidase_C39 like family AAA_5 PF07728.14 gi|150399021|ref|YP_001322788.1| - 0.00018 21.5 0.0 0.0008 19.4 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|150399021|ref|YP_001322788.1| - 0.014 15.1 0.0 0.11 12.2 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_3 PF07726.11 gi|150399021|ref|YP_001322788.1| - 0.062 13.2 0.0 1.9 8.4 0.0 2.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) HTH_24 PF13412.6 gi|150399021|ref|YP_001322788.1| - 0.1 12.1 0.0 9.7 5.8 0.0 3.1 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding THOC2_N PF16134.5 gi|150399023|ref|YP_001322790.1| - 0.026 13.2 0.1 0.026 13.2 0.1 1.0 1 0 0 1 1 1 0 THO complex subunit 2 N-terminus TetR_N PF00440.23 gi|150399024|ref|YP_001322791.1| - 7e-19 67.4 0.0 1.1e-18 66.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_10 PF16295.5 gi|150399024|ref|YP_001322791.1| - 9.1e-12 45.4 0.0 1.2e-11 45.0 0.0 1.2 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 gi|150399024|ref|YP_001322791.1| - 0.0015 18.7 0.0 0.067 13.3 0.0 2.4 1 1 1 2 2 2 1 Helix-turn-helix of insertion element transposase DLH PF01738.18 gi|150399025|ref|YP_001322792.1| - 8.5e-08 32.0 0.1 5.8e-07 29.3 0.1 2.2 1 1 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 gi|150399025|ref|YP_001322792.1| - 4.4e-07 29.8 0.0 6.8e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Hydrolase_4 PF12146.8 gi|150399025|ref|YP_001322792.1| - 0.00014 21.3 0.0 0.00075 18.8 0.0 2.0 2 0 0 2 2 2 1 Serine aminopeptidase, S33 BAAT_C PF08840.11 gi|150399025|ref|YP_001322792.1| - 0.0013 18.7 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal AXE1 PF05448.12 gi|150399025|ref|YP_001322792.1| - 0.003 16.3 0.1 0.0058 15.3 0.1 1.5 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Abhydrolase_1 PF00561.20 gi|150399025|ref|YP_001322792.1| - 0.041 13.5 0.0 0.36 10.4 0.0 2.0 1 1 1 2 2 2 0 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 gi|150399025|ref|YP_001322792.1| - 0.044 13.3 0.0 0.091 12.2 0.0 1.6 1 0 0 1 1 1 0 Prolyl oligopeptidase family RMMBL PF07521.12 gi|150399025|ref|YP_001322792.1| - 0.065 13.2 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain Aldo_ket_red PF00248.21 gi|150399026|ref|YP_001322793.1| - 2.6e-15 56.4 0.0 2.8e-13 49.7 0.1 2.1 1 1 1 2 2 2 2 Aldo/keto reductase family Fer4_17 PF13534.6 gi|150399026|ref|YP_001322793.1| - 4.7e-08 33.5 8.2 1.3e-07 32.0 8.2 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399026|ref|YP_001322793.1| - 8.2e-06 25.8 20.8 0.00011 22.3 9.7 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399026|ref|YP_001322793.1| - 1.4e-05 25.2 10.4 0.00066 19.9 0.9 2.9 3 1 0 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399026|ref|YP_001322793.1| - 5.6e-05 23.2 8.6 0.00019 21.6 8.7 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399026|ref|YP_001322793.1| - 0.00015 21.5 2.5 0.00015 21.5 2.5 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399026|ref|YP_001322793.1| - 0.00016 22.0 9.0 0.00042 20.7 9.1 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399026|ref|YP_001322793.1| - 0.0047 16.9 3.4 0.0047 16.9 3.4 2.3 2 0 0 2 2 1 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399026|ref|YP_001322793.1| - 0.0063 16.5 3.0 0.0063 16.5 3.0 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399026|ref|YP_001322793.1| - 0.013 16.1 13.8 0.44 11.2 14.4 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399026|ref|YP_001322793.1| - 0.28 12.2 13.7 2.3 9.2 13.1 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_20 PF14691.6 gi|150399026|ref|YP_001322793.1| - 0.58 10.0 9.7 0.074 12.8 1.0 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_21 PF14697.6 gi|150399026|ref|YP_001322793.1| - 1 9.5 12.5 11 6.2 12.6 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Cupin_2 PF07883.11 gi|150399027|ref|YP_001322794.1| - 1.4e-12 47.2 0.9 2.6e-12 46.3 0.9 1.6 1 1 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|150399027|ref|YP_001322794.1| - 2.3e-05 24.3 0.5 3.5e-05 23.7 0.5 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 gi|150399027|ref|YP_001322794.1| - 0.00015 21.4 0.0 0.0002 21.0 0.0 1.2 1 0 0 1 1 1 1 Cupin ARD PF03079.14 gi|150399027|ref|YP_001322794.1| - 0.0082 16.3 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 1 ARD/ARD' family Cupin_7 PF12973.7 gi|150399027|ref|YP_001322794.1| - 0.029 14.3 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 ChrR Cupin-like domain DUF111 PF01969.17 gi|150399028|ref|YP_001322795.1| - 9.4e-74 248.7 0.1 1.1e-73 248.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 FMN_red PF03358.15 gi|150399029|ref|YP_001322796.1| - 1.3e-23 83.5 0.0 1.6e-23 83.1 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|150399029|ref|YP_001322796.1| - 4.5e-12 46.1 0.0 5.7e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|150399029|ref|YP_001322796.1| - 0.039 14.2 0.0 0.053 13.8 0.0 1.2 1 0 0 1 1 1 0 Flavodoxin domain Fer4_17 PF13534.6 gi|150399029|ref|YP_001322796.1| - 0.091 13.3 4.0 0.26 11.9 2.0 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399029|ref|YP_001322796.1| - 0.26 11.4 4.3 0.59 10.3 4.3 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain Aldo_ket_red PF00248.21 gi|150399030|ref|YP_001322797.1| - 3.2e-37 128.3 0.0 2.5e-35 122.1 0.0 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_9 PF13187.6 gi|150399030|ref|YP_001322797.1| - 4.5e-10 39.6 6.9 8.1e-10 38.7 6.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399030|ref|YP_001322797.1| - 7.8e-09 36.0 6.5 1.6e-08 34.9 6.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399030|ref|YP_001322797.1| - 2.7e-05 23.8 11.6 0.00042 20.0 2.3 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399030|ref|YP_001322797.1| - 0.00014 21.9 9.5 0.0049 17.0 0.6 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399030|ref|YP_001322797.1| - 0.00099 20.0 6.1 0.017 16.1 0.8 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|150399030|ref|YP_001322797.1| - 0.0013 18.9 6.1 0.2 11.8 0.7 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150399030|ref|YP_001322797.1| - 0.0021 18.9 1.9 0.87 10.5 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399030|ref|YP_001322797.1| - 0.0031 17.9 12.0 0.011 16.1 12.0 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399030|ref|YP_001322797.1| - 0.0053 16.8 16.8 0.0083 16.2 3.0 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.6 gi|150399030|ref|YP_001322797.1| - 0.014 15.1 0.5 0.014 15.1 0.5 2.2 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 gi|150399030|ref|YP_001322797.1| - 0.015 15.5 4.0 0.31 11.3 0.7 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399030|ref|YP_001322797.1| - 0.17 12.5 15.4 0.15 12.6 4.1 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399030|ref|YP_001322797.1| - 0.49 11.0 16.1 0.23 12.1 3.1 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399030|ref|YP_001322797.1| - 0.84 9.8 14.8 0.14 12.3 2.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|150399030|ref|YP_001322797.1| - 2.5 9.2 14.6 0.44 11.6 2.8 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain AIRC PF00731.20 gi|150399031|ref|YP_001322798.1| - 1.4e-16 60.4 7.3 1.4e-16 60.4 7.3 2.0 2 0 0 2 2 2 1 AIR carboxylase GARS_C PF02843.16 gi|150399031|ref|YP_001322798.1| - 1.5 9.1 5.3 2.8 8.3 0.4 2.9 2 1 1 3 3 3 0 Phosphoribosylglycinamide synthetase, C domain LRR_5 PF13306.6 gi|150399032|ref|YP_001322799.1| - 6.2e-87 288.1 30.9 3.8e-33 114.2 4.9 3.4 1 1 2 3 3 3 3 BspA type Leucine rich repeat region (6 copies) FNIP PF05725.12 gi|150399032|ref|YP_001322799.1| - 4.7e-09 36.3 42.9 0.21 11.8 0.1 9.9 3 2 8 12 12 12 10 FNIP Repeat YEATS PF03366.16 gi|150399032|ref|YP_001322799.1| - 0.0011 18.8 0.4 19 5.3 0.0 4.1 2 1 2 4 4 4 1 YEATS family UvrA_DNA-bind PF17755.1 gi|150399032|ref|YP_001322799.1| - 0.0047 17.3 2.6 44 4.5 0.0 5.5 5 1 1 6 6 6 0 UvrA DNA-binding domain DUF612 PF04747.12 gi|150399032|ref|YP_001322799.1| - 0.039 13.1 2.4 7.7 5.5 0.0 4.2 2 2 1 5 5 5 0 Protein of unknown function, DUF612 HSP9_HSP12 PF04119.12 gi|150399032|ref|YP_001322799.1| - 0.065 13.6 0.0 30 5.1 0.0 3.7 4 1 1 5 5 5 0 Heat shock protein 9/12 YDG PF18657.1 gi|150399033|ref|YP_001322800.1| - 0.89 9.8 11.3 0.11 12.7 4.3 2.8 2 2 2 4 4 4 0 YDG domain ECF_trnsprt PF12822.7 gi|150399034|ref|YP_001322801.1| - 1.8e-06 28.1 32.2 2.7e-06 27.6 32.2 1.3 1 0 0 1 1 1 1 ECF transporter, substrate-specific component 5TM-5TMR_LYT PF07694.12 gi|150399034|ref|YP_001322801.1| - 3.4e-06 26.7 15.1 3.4e-06 26.7 15.1 2.2 1 1 2 3 3 3 1 5TMR of 5TMR-LYT ECF-ribofla_trS PF07155.12 gi|150399034|ref|YP_001322801.1| - 0.00044 20.3 23.4 0.0018 18.3 23.2 2.0 1 1 1 2 2 2 1 ECF-type riboflavin transporter, S component Romo1 PF10247.9 gi|150399034|ref|YP_001322801.1| - 0.022 15.1 2.7 0.067 13.6 0.8 2.5 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 CbiM PF01891.16 gi|150399034|ref|YP_001322801.1| - 5.5 6.8 18.7 9.9 5.9 18.7 1.6 1 1 0 1 1 1 0 Cobalt uptake substrate-specific transmembrane region p12I PF12233.8 gi|150399034|ref|YP_001322801.1| - 6.2 7.4 9.6 0.27 11.8 2.7 2.3 2 1 1 3 3 3 0 Human adult T cell leukemia/lymphoma virus protein Cation_efflux PF01545.21 gi|150399035|ref|YP_001322802.1| - 2.1e-25 89.6 13.7 2.6e-25 89.3 13.7 1.1 1 0 0 1 1 1 1 Cation efflux family DUF3272 PF11676.8 gi|150399035|ref|YP_001322802.1| - 0.023 15.0 3.5 0.023 15.0 3.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3272) Ilm1 PF10311.9 gi|150399035|ref|YP_001322802.1| - 3.2 7.4 5.8 5.7 6.6 0.0 3.2 3 1 1 4 4 4 0 Increased loss of mitochondrial DNA protein 1 TetR_N PF00440.23 gi|150399036|ref|YP_001322803.1| - 6.5e-16 57.9 0.0 1.3e-15 56.9 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_37 PF18665.1 gi|150399036|ref|YP_001322803.1| - 0.0024 18.5 3.2 0.0064 17.1 3.2 1.7 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_13 PF16925.5 gi|150399036|ref|YP_001322803.1| - 0.0043 17.0 0.0 0.0074 16.2 0.0 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HAD_2 PF13419.6 gi|150399036|ref|YP_001322803.1| - 0.089 12.9 3.4 0.19 11.8 3.4 1.5 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase SBP_bac_3 PF00497.20 gi|150399037|ref|YP_001322804.1| - 3.3e-55 187.0 0.1 3.7e-55 186.8 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 gi|150399037|ref|YP_001322804.1| - 4.6e-08 33.2 0.1 3e-06 27.4 0.1 2.3 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 gi|150399037|ref|YP_001322804.1| - 0.0057 16.6 0.2 0.017 15.1 0.2 1.7 1 1 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|150399037|ref|YP_001322804.1| - 0.096 12.3 0.0 0.27 10.8 0.0 1.7 1 1 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein DUF1495 PF07381.11 gi|150399039|ref|YP_001322806.1| - 9.2e-34 115.1 0.7 1.1e-33 114.9 0.7 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) DUF4364 PF14277.6 gi|150399039|ref|YP_001322806.1| - 0.0081 15.9 0.1 0.013 15.3 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) DUF505 PF04458.12 gi|150399039|ref|YP_001322806.1| - 0.081 11.3 0.1 0.11 10.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Mycobact_memb PF05423.13 gi|150399040|ref|YP_001322807.1| - 0.024 14.6 0.2 0.045 13.7 0.2 1.8 1 1 0 1 1 1 0 Mycobacterium membrane protein TPR_1 PF00515.28 gi|150399041|ref|YP_001322808.1| - 4e-44 146.7 18.9 1.7e-12 46.6 0.4 5.1 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 gi|150399041|ref|YP_001322808.1| - 2.1e-39 130.5 12.2 5.2e-09 35.5 0.2 5.2 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_8 PF13181.6 gi|150399041|ref|YP_001322808.1| - 3.1e-33 111.2 15.3 9.5e-09 34.8 0.1 5.2 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_11 PF13414.6 gi|150399041|ref|YP_001322808.1| - 6e-25 86.7 23.8 3.7e-06 26.5 0.1 5.7 2 1 4 6 6 6 5 TPR repeat TPR_17 PF13431.6 gi|150399041|ref|YP_001322808.1| - 4.2e-20 70.6 15.2 2.4e-06 27.5 0.2 5.9 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_16 PF13432.6 gi|150399041|ref|YP_001322808.1| - 6.1e-20 71.6 0.0 8.7e-10 39.1 0.1 3.1 1 1 1 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|150399041|ref|YP_001322808.1| - 2.2e-19 69.7 0.0 5.8e-07 29.9 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|150399041|ref|YP_001322808.1| - 3e-17 61.3 3.4 0.00021 21.1 0.0 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|150399041|ref|YP_001322808.1| - 6e-16 57.8 0.0 0.022 15.5 0.0 5.1 1 1 4 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.6 gi|150399041|ref|YP_001322808.1| - 8.6e-16 58.0 3.7 0.0001 22.5 0.4 4.7 1 1 3 4 4 4 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|150399041|ref|YP_001322808.1| - 1.5e-15 57.2 16.6 4.5e-07 30.0 4.0 3.3 1 1 2 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|150399041|ref|YP_001322808.1| - 2.9e-13 49.5 5.8 0.11 13.2 0.1 5.3 5 0 0 5 5 5 3 Tetratricopeptide repeat NARP1 PF12569.8 gi|150399041|ref|YP_001322808.1| - 1.4e-09 37.5 0.7 8.7e-05 21.6 0.0 2.9 1 1 2 3 3 3 2 NMDA receptor-regulated protein 1 TPR_10 PF13374.6 gi|150399041|ref|YP_001322808.1| - 1.4e-09 37.5 0.9 0.32 10.9 0.0 4.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|150399041|ref|YP_001322808.1| - 2.4e-09 37.2 0.0 0.00067 19.8 0.0 3.0 2 1 2 4 4 4 3 Tetratricopeptide repeat MIT PF04212.18 gi|150399041|ref|YP_001322808.1| - 2.8e-07 30.5 6.4 0.6 10.2 0.2 5.1 3 1 1 4 4 4 2 MIT (microtubule interacting and transport) domain Fis1_TPR_C PF14853.6 gi|150399041|ref|YP_001322808.1| - 2.8e-07 30.5 7.7 0.066 13.3 0.1 5.0 3 1 2 5 5 5 2 Fis1 C-terminal tetratricopeptide repeat TOM20_plant PF06552.12 gi|150399041|ref|YP_001322808.1| - 0.0012 18.6 5.9 0.66 9.7 0.2 4.3 1 1 1 3 3 3 1 Plant specific mitochondrial import receptor subunit TOM20 DUF5113 PF17140.4 gi|150399041|ref|YP_001322808.1| - 0.0037 17.1 12.0 0.71 9.7 0.4 4.5 1 1 4 5 5 5 2 Domain of unknown function (DUF5113) TPR_3 PF07720.12 gi|150399041|ref|YP_001322808.1| - 0.0039 17.1 25.3 0.044 13.8 0.4 5.8 5 2 0 5 5 5 2 Tetratricopeptide repeat NRBF2_MIT PF17169.4 gi|150399041|ref|YP_001322808.1| - 0.022 15.0 0.1 11 6.4 0.0 3.1 2 1 1 3 3 3 0 MIT domain of nuclear receptor-binding factor 2 Sel1 PF08238.12 gi|150399041|ref|YP_001322808.1| - 0.043 14.5 12.5 20 6.0 3.5 5.5 4 2 1 5 5 5 0 Sel1 repeat DUF3856 PF12968.7 gi|150399041|ref|YP_001322808.1| - 0.046 13.8 0.7 2.8 8.0 0.0 3.2 2 2 2 4 4 4 0 Domain of Unknown Function (DUF3856) TPR_15 PF13429.6 gi|150399041|ref|YP_001322808.1| - 0.054 12.7 0.0 1.6 7.9 0.0 2.5 1 1 0 1 1 1 0 Tetratricopeptide repeat Prefoldin PF02996.17 gi|150399041|ref|YP_001322808.1| - 0.24 11.3 1.2 1.5 8.7 0.0 2.4 3 0 0 3 3 3 0 Prefoldin subunit SPO22 PF08631.10 gi|150399041|ref|YP_001322808.1| - 1.3 8.5 5.7 57 3.1 0.0 3.7 2 1 3 5 5 5 0 Meiosis protein SPO22/ZIP4 like TP_methylase PF00590.20 gi|150399043|ref|YP_001322810.1| - 5e-46 157.3 0.0 5.6e-46 157.2 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CGI-121 PF08617.10 gi|150399044|ref|YP_001322811.1| - 6.3e-12 45.9 1.0 8e-12 45.6 1.0 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 Histidinol_dh PF00815.20 gi|150399045|ref|YP_001322812.1| - 6.6e-164 545.8 1.4 7.5e-164 545.6 1.4 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase HutP PF09021.11 gi|150399045|ref|YP_001322812.1| - 0.055 13.8 0.4 0.12 12.7 0.4 1.5 1 0 0 1 1 1 0 HutP DUF371 PF04027.13 gi|150399045|ref|YP_001322812.1| - 0.067 13.2 0.6 0.067 13.2 0.6 1.8 3 0 0 3 3 3 0 Domain of unknown function (DUF371) Pox_P4A PF03395.14 gi|150399045|ref|YP_001322812.1| - 0.094 10.3 0.1 0.14 9.7 0.1 1.1 1 0 0 1 1 1 0 Poxvirus P4A protein Nit_Regul_Hom PF10126.9 gi|150399045|ref|YP_001322812.1| - 0.14 12.1 4.0 0.24 11.4 0.7 2.8 3 0 0 3 3 3 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII AAA_23 PF13476.6 gi|150399045|ref|YP_001322812.1| - 0.39 11.2 6.1 0.44 11.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain DUF2120 PF09893.9 gi|150399045|ref|YP_001322812.1| - 6.1 6.9 9.1 15 5.7 0.9 2.8 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2120) YWFCY PF14293.6 gi|150399046|ref|YP_001322813.1| - 0.11 12.8 0.8 0.51 10.7 0.0 2.1 2 0 0 2 2 2 0 YWFCY protein ChaC PF04752.12 gi|150399046|ref|YP_001322813.1| - 0.12 12.4 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 ChaC-like protein DNA_ligase_A_M PF01068.21 gi|150399047|ref|YP_001322814.1| - 6e-58 195.8 0.4 1.1e-57 195.1 0.4 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|150399047|ref|YP_001322814.1| - 1.8e-32 113.1 0.2 1.2e-30 107.1 0.1 2.4 1 1 1 2 2 2 2 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|150399047|ref|YP_001322814.1| - 1.7e-16 60.6 0.0 1.2e-15 57.9 0.0 2.5 2 1 0 2 2 2 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|150399047|ref|YP_001322814.1| - 7.5e-05 23.1 0.2 0.00014 22.2 0.2 1.4 1 0 0 1 1 1 1 RNA ligase Arc_PepC PF06819.11 gi|150399047|ref|YP_001322814.1| - 0.0013 18.9 0.9 0.007 16.5 0.8 2.4 1 1 0 1 1 1 1 Archaeal Peptidase A24 C-terminal Domain TTRAP PF14203.6 gi|150399047|ref|YP_001322814.1| - 0.071 13.1 0.0 0.84 9.7 0.0 2.6 2 0 0 2 2 2 0 Putative tranposon-transfer assisting protein Lyase_1 PF00206.20 gi|150399048|ref|YP_001322815.1| - 1.8e-52 178.7 2.3 2.6e-52 178.2 2.3 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|150399048|ref|YP_001322815.1| - 2.4e-23 82.4 1.9 1.1e-22 80.3 0.0 2.8 3 0 0 3 3 3 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.11 gi|150399048|ref|YP_001322815.1| - 5.5e-05 23.2 0.1 0.00019 21.5 0.1 1.9 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal FumaraseC_C PF10415.9 gi|150399048|ref|YP_001322815.1| - 0.0016 18.8 0.6 0.0078 16.6 0.1 2.3 2 0 0 2 2 2 1 Fumarase C C-terminus ASL_C2 PF14698.6 gi|150399048|ref|YP_001322815.1| - 0.027 15.2 1.2 0.12 13.2 0.0 2.7 3 0 0 3 3 3 0 Argininosuccinate lyase C-terminal GAD PF02938.14 gi|150399048|ref|YP_001322815.1| - 0.2 11.9 2.0 1.9 8.8 0.3 2.7 3 0 0 3 3 3 0 GAD domain MarR PF01047.22 gi|150399049|ref|YP_001322816.1| - 3.3e-15 55.7 0.0 6.4e-15 54.8 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|150399049|ref|YP_001322816.1| - 7e-11 41.9 0.0 9.7e-11 41.4 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|150399049|ref|YP_001322816.1| - 4e-10 40.0 0.0 6.3e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|150399049|ref|YP_001322816.1| - 3.2e-09 36.8 0.1 8.9e-09 35.4 0.1 1.8 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|150399049|ref|YP_001322816.1| - 1.3e-06 28.1 0.1 2.2e-06 27.5 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|150399049|ref|YP_001322816.1| - 7.2e-06 25.5 0.0 1.7e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|150399049|ref|YP_001322816.1| - 6.3e-05 23.1 0.2 0.00014 21.9 0.1 1.7 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|150399049|ref|YP_001322816.1| - 6.5e-05 22.6 0.0 9.9e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain GntR PF00392.21 gi|150399049|ref|YP_001322816.1| - 8.2e-05 22.2 0.0 0.00016 21.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_36 PF13730.6 gi|150399049|ref|YP_001322816.1| - 0.00011 22.1 0.1 0.00036 20.4 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Replic_Relax PF13814.6 gi|150399049|ref|YP_001322816.1| - 0.00043 20.4 0.0 0.00049 20.2 0.0 1.2 1 0 0 1 1 1 1 Replication-relaxation HTH_6 PF01418.17 gi|150399049|ref|YP_001322816.1| - 0.0012 18.8 0.2 0.012 15.5 0.0 2.3 2 1 0 2 2 2 1 Helix-turn-helix domain, rpiR family HTH_11 PF08279.12 gi|150399049|ref|YP_001322816.1| - 0.0025 17.7 0.2 0.009 15.9 0.0 2.1 2 1 0 2 2 1 1 HTH domain Rrf2 PF02082.20 gi|150399049|ref|YP_001322816.1| - 0.0059 16.9 0.6 0.048 14.0 0.1 2.5 2 1 1 3 3 3 1 Transcriptional regulator UPF0122 PF04297.14 gi|150399049|ref|YP_001322816.1| - 0.0091 16.2 3.5 0.02 15.1 1.6 2.4 1 1 1 2 2 2 1 Putative helix-turn-helix protein, YlxM / p13 like HTH_1 PF00126.27 gi|150399049|ref|YP_001322816.1| - 0.018 15.0 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF2089 PF09862.9 gi|150399049|ref|YP_001322816.1| - 0.019 15.0 1.5 0.025 14.6 1.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2089) HTH_Crp_2 PF13545.6 gi|150399049|ref|YP_001322816.1| - 0.019 14.9 0.0 0.034 14.1 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|150399049|ref|YP_001322816.1| - 0.022 14.6 0.0 0.045 13.6 0.0 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_WhiA PF02650.14 gi|150399049|ref|YP_001322816.1| - 0.023 15.0 4.2 0.35 11.2 0.3 2.3 2 0 0 2 2 2 0 WhiA C-terminal HTH domain LexA_DNA_bind PF01726.16 gi|150399049|ref|YP_001322816.1| - 0.037 13.8 0.0 0.11 12.3 0.0 1.8 1 0 0 1 1 1 0 LexA DNA binding domain RPA_C PF08784.11 gi|150399049|ref|YP_001322816.1| - 0.041 14.5 0.0 0.19 12.4 0.0 2.0 2 0 0 2 2 2 0 Replication protein A C terminal HTH_5 PF01022.20 gi|150399049|ref|YP_001322816.1| - 0.045 13.6 0.0 0.1 12.5 0.0 1.7 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_54 PF18607.1 gi|150399049|ref|YP_001322816.1| - 0.053 13.6 0.6 0.14 12.2 0.1 1.9 1 1 1 2 2 2 0 ParA helix turn helix domain HTH_10 PF04967.12 gi|150399049|ref|YP_001322816.1| - 0.078 12.8 0.4 0.38 10.6 0.0 2.3 3 0 0 3 3 2 0 HTH DNA binding domain HTH_Tnp_4 PF13613.6 gi|150399049|ref|YP_001322816.1| - 0.082 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease TetR_N PF00440.23 gi|150399049|ref|YP_001322816.1| - 0.086 12.7 0.0 0.99 9.3 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family IL31 PF15209.6 gi|150399049|ref|YP_001322816.1| - 0.13 12.1 4.6 0.069 12.9 0.7 2.1 1 1 1 2 2 2 0 Interleukin 31 Integrin_b_cyt PF08725.11 gi|150399049|ref|YP_001322816.1| - 0.17 11.6 4.4 13 5.6 0.2 3.2 3 0 0 3 3 3 0 Integrin beta cytoplasmic domain NPCBM_assoc PF10633.9 gi|150399050|ref|YP_001322817.1| - 1.2e-15 57.5 0.0 0.0082 16.4 0.0 5.8 4 3 0 4 4 4 4 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|150399050|ref|YP_001322817.1| - 4.9e-08 33.2 18.9 0.0025 18.0 2.8 5.5 4 1 0 5 5 5 3 CARDB AP3B1_C PF14796.6 gi|150399050|ref|YP_001322817.1| - 0.0015 18.9 0.5 0.12 12.6 0.0 3.3 3 0 0 3 3 3 1 Clathrin-adaptor complex-3 beta-1 subunit C-terminal Arrestin_C PF02752.22 gi|150399050|ref|YP_001322817.1| - 0.0015 19.0 4.2 0.19 12.2 0.1 4.1 2 1 1 3 3 3 1 Arrestin (or S-antigen), C-terminal domain DUF11 PF01345.18 gi|150399050|ref|YP_001322817.1| - 0.0024 18.1 4.1 14 6.1 0.0 4.7 4 3 0 4 4 4 1 Domain of unknown function DUF11 DUF4448 PF14610.6 gi|150399050|ref|YP_001322817.1| - 0.023 14.5 5.0 0.44 10.3 2.9 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4448) N_BRCA1_IG PF16158.5 gi|150399050|ref|YP_001322817.1| - 0.052 14.3 0.1 26 5.6 0.0 3.1 3 0 0 3 3 3 0 Ig-like domain from next to BRCA1 gene Cupredoxin_1 PF13473.6 gi|150399050|ref|YP_001322817.1| - 0.7 10.0 3.3 21 5.3 0.1 3.8 4 0 0 4 4 4 0 Cupredoxin-like domain DUF5001 PF16392.5 gi|150399050|ref|YP_001322817.1| - 4.4 7.3 6.3 19 5.3 0.2 4.2 4 0 0 4 4 4 0 Ig-like domain MMPL PF03176.15 gi|150399051|ref|YP_001322818.1| - 8.9e-39 133.3 0.6 1.1e-38 133.1 0.6 1.1 1 0 0 1 1 1 1 MMPL family Patched PF02460.18 gi|150399051|ref|YP_001322818.1| - 7.9e-09 34.2 12.9 3.5e-08 32.0 9.5 2.0 1 1 0 2 2 2 2 Patched family SecD_SecF PF02355.16 gi|150399051|ref|YP_001322818.1| - 9.4e-08 31.7 8.2 2e-07 30.6 8.2 1.5 1 0 0 1 1 1 1 Protein export membrane protein ACR_tran PF00873.19 gi|150399051|ref|YP_001322818.1| - 1.3e-05 23.2 6.6 2e-05 22.5 6.6 1.4 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family DUF373 PF04123.13 gi|150399051|ref|YP_001322818.1| - 9.5 5.6 11.3 1.9 7.9 6.7 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF373) ArsP_1 PF03773.13 gi|150399053|ref|YP_001322820.1| - 2.2e-32 112.4 28.6 1.5e-31 109.7 28.6 1.8 1 1 0 1 1 1 1 Predicted permease Fer4_5 PF12801.7 gi|150399054|ref|YP_001322821.1| - 2.5e-12 46.5 4.5 4.3e-06 26.6 0.2 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399054|ref|YP_001322821.1| - 4.6 7.5 8.7 0.59 10.3 1.0 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain SBP_bac_11 PF13531.6 gi|150399055|ref|YP_001322822.1| - 3.9e-39 134.8 0.0 5.2e-39 134.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|150399055|ref|YP_001322822.1| - 6.4e-06 26.3 0.2 0.096 12.6 0.1 2.4 2 1 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|150399055|ref|YP_001322822.1| - 0.0017 18.2 0.0 0.65 9.7 0.0 2.2 2 1 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.20 gi|150399055|ref|YP_001322822.1| - 0.0052 16.2 0.1 0.0071 15.8 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 SBP_bac_6 PF13343.6 gi|150399055|ref|YP_001322822.1| - 0.04 13.3 0.0 0.097 12.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein DUF1310 PF07006.11 gi|150399055|ref|YP_001322822.1| - 0.15 12.0 0.5 23 5.0 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1310) DUF166 PF02593.14 gi|150399056|ref|YP_001322823.1| - 3.6e-67 226.1 0.6 4e-67 226.0 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function CbiA PF01656.23 gi|150399057|ref|YP_001322824.1| - 1.3e-21 77.0 0.2 1.9e-21 76.5 0.2 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|150399057|ref|YP_001322824.1| - 7.6e-12 45.5 0.3 3.1e-11 43.5 0.1 2.0 1 1 0 1 1 1 1 AAA domain ParA PF10609.9 gi|150399057|ref|YP_001322824.1| - 7.6e-10 38.6 3.0 0.00019 20.9 0.2 2.5 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|150399057|ref|YP_001322824.1| - 2.6e-09 36.9 3.8 0.00039 20.0 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|150399057|ref|YP_001322824.1| - 3.8e-08 32.9 3.0 1.3e-07 31.2 0.2 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|150399057|ref|YP_001322824.1| - 5.1e-05 22.9 0.0 0.18 11.2 0.0 2.3 2 1 0 2 2 2 2 Cellulose biosynthesis protein BcsQ AAA_26 PF13500.6 gi|150399057|ref|YP_001322824.1| - 0.00095 19.0 1.2 0.0031 17.4 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|150399057|ref|YP_001322824.1| - 0.001 18.9 0.2 0.0033 17.2 0.1 1.8 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 gi|150399057|ref|YP_001322824.1| - 0.0097 15.7 0.1 0.022 14.6 0.0 1.6 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein DUF87 PF01935.17 gi|150399057|ref|YP_001322824.1| - 0.012 15.7 1.2 3.8 7.5 0.2 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain RsgA_GTPase PF03193.16 gi|150399057|ref|YP_001322824.1| - 0.028 14.3 0.2 4.6 7.1 0.1 2.3 2 0 0 2 2 2 0 RsgA GTPase NTPase_1 PF03266.15 gi|150399057|ref|YP_001322824.1| - 0.035 14.0 2.5 0.051 13.5 0.3 2.1 2 0 0 2 2 2 0 NTPase AAA_18 PF13238.6 gi|150399057|ref|YP_001322824.1| - 0.063 13.8 0.1 0.14 12.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 gi|150399057|ref|YP_001322824.1| - 0.074 12.8 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family SRP54 PF00448.22 gi|150399057|ref|YP_001322824.1| - 0.1 12.2 0.8 0.21 11.2 0.2 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Ribosomal_S10 PF00338.22 gi|150399057|ref|YP_001322824.1| - 0.12 12.6 0.0 0.23 11.7 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S10p/S20e CooT PF10133.9 gi|150399058|ref|YP_001322825.1| - 5.9e-18 64.9 1.3 6.5e-18 64.8 1.3 1.0 1 0 0 1 1 1 1 CO dehydrogenase accessory protein CooT STT3_PglB_C PF18527.1 gi|150399058|ref|YP_001322825.1| - 0.032 14.3 0.5 0.09 12.9 0.4 1.7 1 1 0 1 1 1 0 STT3/PglB C-terminal beta-barrel domain Fer4 PF00037.27 gi|150399059|ref|YP_001322826.1| - 4.7e-12 45.2 36.3 5.6e-07 29.1 3.0 5.7 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399059|ref|YP_001322826.1| - 6.7e-12 45.3 30.5 4.2e-07 30.0 9.1 2.6 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|150399059|ref|YP_001322826.1| - 1.1e-11 44.8 15.8 1.1e-11 44.8 15.8 2.1 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399059|ref|YP_001322826.1| - 3.7e-10 40.2 28.5 0.0036 17.9 9.6 4.2 2 2 3 5 5 5 5 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399059|ref|YP_001322826.1| - 5.8e-10 38.7 30.9 0.0015 18.5 1.7 4.2 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399059|ref|YP_001322826.1| - 3.5e-09 36.3 33.0 6.6e-06 26.0 2.6 4.9 4 2 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399059|ref|YP_001322826.1| - 3.1e-08 33.6 30.6 0.00058 20.0 10.1 3.0 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399059|ref|YP_001322826.1| - 2.7e-07 31.1 37.8 0.02 15.8 3.2 4.2 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399059|ref|YP_001322826.1| - 0.00018 21.6 34.1 0.0068 16.5 13.0 3.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399059|ref|YP_001322826.1| - 0.00028 21.8 30.6 0.33 11.9 4.5 4.5 2 2 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|150399059|ref|YP_001322826.1| - 0.0046 17.4 30.9 0.023 15.2 0.7 4.4 4 1 0 4 4 4 3 4Fe-4S binding domain OKR_DC_1_N PF03709.15 gi|150399059|ref|YP_001322826.1| - 0.072 13.4 0.1 0.37 11.1 0.1 2.1 2 1 0 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain Fer4_8 PF13183.6 gi|150399059|ref|YP_001322826.1| - 1.9 9.0 35.9 0.37 11.3 2.7 4.3 2 2 1 3 3 3 0 4Fe-4S dicluster domain CdhD PF03599.16 gi|150399060|ref|YP_001322827.1| - 2.5e-144 480.8 0.8 2.9e-144 480.5 0.8 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.13 gi|150399060|ref|YP_001322827.1| - 2e-15 56.1 2.9 5.2e-15 54.8 2.9 1.8 1 0 0 1 1 1 1 Putative Fe-S cluster CdhD PF03599.16 gi|150399061|ref|YP_001322828.1| - 2.8e-87 292.9 1.1 1e-82 277.9 0.1 3.2 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit CbiA PF01656.23 gi|150399062|ref|YP_001322829.1| - 4.3e-19 68.8 0.2 6.2e-19 68.3 0.2 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|150399062|ref|YP_001322829.1| - 1.5e-16 60.9 0.2 2.2e-16 60.3 0.2 1.2 1 0 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 gi|150399062|ref|YP_001322829.1| - 2e-12 47.0 4.4 9.8e-12 44.7 0.6 2.4 1 1 1 2 2 2 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|150399062|ref|YP_001322829.1| - 8.5e-08 32.0 0.0 3.1e-07 30.1 0.0 1.8 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|150399062|ref|YP_001322829.1| - 1.3e-07 31.3 0.4 0.00018 21.0 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ParA PF10609.9 gi|150399062|ref|YP_001322829.1| - 2.3e-06 27.3 4.0 1.4e-05 24.6 4.0 2.2 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase NTPase_1 PF03266.15 gi|150399062|ref|YP_001322829.1| - 6.5e-05 22.9 1.3 0.28 11.1 0.0 2.2 2 0 0 2 2 2 2 NTPase MipZ PF09140.11 gi|150399062|ref|YP_001322829.1| - 0.00012 21.5 0.3 0.036 13.4 0.0 2.2 2 0 0 2 2 2 2 ATPase MipZ AAA_24 PF13479.6 gi|150399062|ref|YP_001322829.1| - 0.00024 20.9 0.0 0.00079 19.2 0.0 1.7 1 1 1 2 2 2 2 AAA domain TrkA_N PF02254.18 gi|150399062|ref|YP_001322829.1| - 0.0043 17.3 1.6 3.7 7.9 0.3 3.1 2 1 0 2 2 2 2 TrkA-N domain NB-ARC PF00931.22 gi|150399062|ref|YP_001322829.1| - 0.013 14.7 1.6 0.05 12.8 0.6 2.0 2 0 0 2 2 2 0 NB-ARC domain MeaB PF03308.16 gi|150399062|ref|YP_001322829.1| - 0.027 13.5 0.3 0.06 12.3 0.1 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 gi|150399062|ref|YP_001322829.1| - 0.055 13.6 0.6 11 6.2 0.1 2.4 2 0 0 2 2 2 0 50S ribosome-binding GTPase Toprim_4 PF13662.6 gi|150399062|ref|YP_001322829.1| - 0.061 13.8 0.1 0.16 12.4 0.1 1.8 1 1 0 1 1 1 0 Toprim domain DUF87 PF01935.17 gi|150399062|ref|YP_001322829.1| - 0.084 13.0 3.8 0.18 11.9 0.6 2.3 2 1 0 2 2 2 0 Helicase HerA, central domain Toprim PF01751.22 gi|150399062|ref|YP_001322829.1| - 0.11 12.7 0.1 0.56 10.5 0.1 2.1 1 1 1 2 2 2 0 Toprim domain MobB PF03205.14 gi|150399062|ref|YP_001322829.1| - 0.11 12.4 0.1 0.67 9.8 0.1 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 gi|150399062|ref|YP_001322829.1| - 0.14 12.5 1.2 1.7 9.1 1.2 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|150399062|ref|YP_001322829.1| - 0.18 12.2 0.0 0.24 11.8 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain SRP54 PF00448.22 gi|150399062|ref|YP_001322829.1| - 0.45 10.1 2.1 8.4 6.0 0.2 2.4 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain CdhC PF03598.15 gi|150399063|ref|YP_001322830.1| - 3.8e-64 215.2 1.0 6e-64 214.6 1.0 1.3 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CO_dh PF02552.16 gi|150399064|ref|YP_001322831.1| - 6.4e-50 169.2 0.0 7.9e-50 168.9 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.22 gi|150399064|ref|YP_001322831.1| - 1.7e-05 24.6 0.0 5.4e-05 23.0 0.0 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Prismane PF03063.20 gi|150399065|ref|YP_001322832.1| - 3.2e-93 313.1 10.1 2.7e-80 270.5 0.0 2.0 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_9 PF13187.6 gi|150399065|ref|YP_001322832.1| - 2e-06 27.8 10.1 2e-06 27.8 10.1 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399065|ref|YP_001322832.1| - 3.4e-05 24.3 11.3 3.4e-05 24.3 11.3 2.3 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399065|ref|YP_001322832.1| - 0.0011 18.7 3.4 0.0011 18.7 3.4 3.9 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399065|ref|YP_001322832.1| - 0.0018 18.4 11.1 0.0018 18.4 11.1 2.8 2 1 0 2 2 1 1 4Fe-4S dicluster domain CODH_A_N PF18537.1 gi|150399065|ref|YP_001322832.1| - 0.0022 18.0 0.0 0.0054 16.7 0.0 1.7 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Fer4_17 PF13534.6 gi|150399065|ref|YP_001322832.1| - 0.0044 17.5 1.3 0.0044 17.5 1.3 3.4 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399065|ref|YP_001322832.1| - 0.012 16.6 0.4 0.012 16.6 0.4 3.8 4 0 0 4 4 4 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|150399065|ref|YP_001322832.1| - 0.023 15.1 1.9 0.023 15.1 1.9 3.1 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399065|ref|YP_001322832.1| - 0.036 14.6 10.7 0.19 12.3 2.2 3.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|150399065|ref|YP_001322832.1| - 0.11 13.3 0.4 0.11 13.3 0.4 3.1 3 0 0 3 3 2 0 4Fe-4S dicluster domain Peripla_BP_4 PF13407.6 gi|150399065|ref|YP_001322832.1| - 0.26 10.8 2.5 4.7 6.7 0.0 3.3 3 1 1 4 4 4 0 Periplasmic binding protein domain DUF166 PF02593.14 gi|150399066|ref|YP_001322833.1| - 4.1e-68 229.2 0.1 5.8e-68 228.7 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function Fer4_6 PF12837.7 gi|150399066|ref|YP_001322833.1| - 2.1e-05 24.4 10.4 0.001 19.1 1.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399066|ref|YP_001322833.1| - 8.2e-05 22.6 8.2 0.00017 21.6 8.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399066|ref|YP_001322833.1| - 0.00011 21.8 2.3 0.00011 21.8 2.3 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399066|ref|YP_001322833.1| - 0.00078 19.6 8.3 0.0015 18.6 8.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399066|ref|YP_001322833.1| - 0.0016 19.3 7.6 0.031 15.2 1.2 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|150399066|ref|YP_001322833.1| - 0.011 16.3 8.9 0.025 15.2 8.9 1.7 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399066|ref|YP_001322833.1| - 0.093 13.3 11.3 0.73 10.5 1.9 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399066|ref|YP_001322833.1| - 0.3 11.3 8.6 4 7.7 0.8 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399066|ref|YP_001322833.1| - 0.31 11.5 9.4 2.8 8.4 9.4 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399066|ref|YP_001322833.1| - 1.4 9.1 10.1 10 6.3 10.1 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain RrnaAD PF00398.20 gi|150399067|ref|YP_001322834.1| - 7.1e-52 176.1 1.5 8.2e-52 175.9 1.5 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|150399067|ref|YP_001322834.1| - 0.00021 21.9 0.0 0.0017 19.1 0.0 2.3 2 2 1 3 3 3 1 Methyltransferase domain NodS PF05401.11 gi|150399067|ref|YP_001322834.1| - 0.0017 18.0 0.0 0.0032 17.1 0.0 1.4 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_11 PF08241.12 gi|150399067|ref|YP_001322834.1| - 0.01 16.5 0.0 0.056 14.1 0.0 2.2 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 gi|150399067|ref|YP_001322834.1| - 0.015 15.1 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Spermine_synth PF01564.17 gi|150399067|ref|YP_001322834.1| - 0.068 12.6 0.1 0.16 11.4 0.0 1.6 2 0 0 2 2 2 0 Spermine/spermidine synthase domain MTS PF05175.14 gi|150399067|ref|YP_001322834.1| - 0.11 12.0 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Cons_hypoth95 PF03602.15 gi|150399068|ref|YP_001322835.1| - 1.2e-07 31.5 0.0 2e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|150399068|ref|YP_001322835.1| - 5.8e-07 29.2 0.2 9e-07 28.6 0.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|150399068|ref|YP_001322835.1| - 0.00015 22.4 0.1 0.0003 21.4 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|150399068|ref|YP_001322835.1| - 0.00029 20.4 0.1 0.0005 19.7 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase small domain N6_N4_Mtase PF01555.18 gi|150399068|ref|YP_001322835.1| - 0.00034 20.4 0.0 0.00059 19.6 0.0 1.4 1 1 0 1 1 1 1 DNA methylase TRM PF02005.16 gi|150399068|ref|YP_001322835.1| - 0.0014 17.9 1.8 0.0015 17.7 0.2 1.8 1 1 0 2 2 2 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.10 gi|150399068|ref|YP_001322835.1| - 0.0017 18.0 0.3 0.004 16.7 0.3 1.6 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 gi|150399068|ref|YP_001322835.1| - 0.0045 16.7 2.3 0.013 15.3 2.3 1.8 1 1 0 1 1 1 1 Met-10+ like-protein MethyltransfD12 PF02086.15 gi|150399068|ref|YP_001322835.1| - 0.024 14.3 0.3 0.043 13.5 0.3 1.4 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_31 PF13847.6 gi|150399068|ref|YP_001322835.1| - 0.025 14.4 0.9 0.056 13.2 0.9 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_18 PF12847.7 gi|150399068|ref|YP_001322835.1| - 0.033 14.1 0.1 0.057 13.4 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain Auto_anti-p27 PF06677.12 gi|150399068|ref|YP_001322835.1| - 2.2 8.5 6.1 3.3 7.9 1.7 2.7 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Topo-VIb_trans PF09239.11 gi|150399069|ref|YP_001322836.1| - 3.4e-53 179.7 0.0 8.3e-53 178.5 0.0 1.6 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.26 gi|150399069|ref|YP_001322836.1| - 8.5e-11 42.4 0.2 2.2e-10 41.0 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|150399069|ref|YP_001322836.1| - 2.6e-09 37.0 0.0 5.7e-09 35.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|150399069|ref|YP_001322836.1| - 0.071 13.1 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Trans_reg_C PF00486.28 gi|150399069|ref|YP_001322836.1| - 0.097 12.8 1.5 0.85 9.7 0.2 2.9 3 0 0 3 3 3 0 Transcriptional regulatory protein, C terminal DUF365 PF04033.12 gi|150399069|ref|YP_001322836.1| - 0.15 12.3 2.5 19 5.6 0.1 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF365) Peptidase_M3_N PF08439.10 gi|150399069|ref|YP_001322836.1| - 0.75 10.1 8.7 1.9 8.8 0.2 4.0 4 1 0 4 4 4 0 Oligopeptidase F tRNA_deacylase PF04414.12 gi|150399070|ref|YP_001322837.1| - 1.2e-65 220.9 0.1 1.4e-65 220.6 0.1 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase zf-SCNM1 PF15803.5 gi|150399070|ref|YP_001322837.1| - 0.12 12.0 0.7 1.1 8.9 0.3 2.7 3 0 0 3 3 3 0 Zinc-finger of sodium channel modifier 1 AIRC PF00731.20 gi|150399071|ref|YP_001322838.1| - 2.4e-17 62.9 0.5 9.6e-17 60.9 0.4 1.8 2 0 0 2 2 2 1 AIR carboxylase NAD_kinase PF01513.21 gi|150399071|ref|YP_001322838.1| - 0.073 12.2 0.3 0.17 11.1 0.2 1.3 1 1 0 1 1 1 0 ATP-NAD kinase AF0941-like PF14591.6 gi|150399071|ref|YP_001322838.1| - 0.25 11.9 1.8 25 5.5 0.2 2.5 2 0 0 2 2 2 0 AF0941-like DUF2226 PF09987.9 gi|150399072|ref|YP_001322839.1| - 3.6e-28 98.8 38.3 4.8e-23 82.0 28.6 4.0 1 1 1 2 2 2 2 Uncharacterized protein conserved in archaea (DUF2226) Skp1_POZ PF03931.15 gi|150399072|ref|YP_001322839.1| - 1.3e-05 25.2 1.3 3.7e-05 23.8 0.3 2.3 2 0 0 2 2 2 1 Skp1 family, tetramerisation domain HCNGP PF07818.13 gi|150399072|ref|YP_001322839.1| - 1.3 9.7 6.1 0.33 11.6 1.8 2.3 2 0 0 2 2 2 0 HCNGP-like protein DUF3881 PF12997.7 gi|150399073|ref|YP_001322840.1| - 0.02 14.1 0.4 0.024 13.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function, E. rectale Gene description (DUF3881) Robl_LC7 PF03259.17 gi|150399073|ref|YP_001322840.1| - 0.091 12.5 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Roadblock/LC7 domain HTH_3 PF01381.22 gi|150399074|ref|YP_001322841.1| - 3.2e-17 62.3 0.2 3.6e-17 62.2 0.2 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|150399074|ref|YP_001322841.1| - 1.2e-09 38.1 0.5 1.2e-09 38.0 0.5 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|150399074|ref|YP_001322841.1| - 2e-06 28.1 0.0 2.2e-06 28.0 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 gi|150399074|ref|YP_001322841.1| - 0.00032 21.0 0.0 0.00033 20.9 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|150399074|ref|YP_001322841.1| - 0.022 14.6 0.0 0.027 14.3 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|150399074|ref|YP_001322841.1| - 0.025 14.5 0.0 0.043 13.8 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 gi|150399074|ref|YP_001322841.1| - 0.042 13.4 0.0 0.066 12.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 MqsA_antitoxin PF15731.5 gi|150399074|ref|YP_001322841.1| - 0.057 13.5 0.0 0.058 13.5 0.0 1.1 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Na_H_Exchanger PF00999.21 gi|150399075|ref|YP_001322842.1| - 0.0045 15.8 3.7 0.0052 15.6 3.7 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CbiM PF01891.16 gi|150399075|ref|YP_001322842.1| - 0.048 13.5 3.6 0.085 12.7 3.5 1.6 1 1 0 1 1 1 0 Cobalt uptake substrate-specific transmembrane region DUF4133 PF13571.6 gi|150399075|ref|YP_001322842.1| - 1.5 9.2 12.6 0.065 13.6 2.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4133) DUF983 PF06170.12 gi|150399075|ref|YP_001322842.1| - 5.1 7.6 8.6 5 7.6 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF983) Copper-bind PF00127.20 gi|150399077|ref|YP_001322844.1| - 7.3e-07 29.6 0.4 2e-05 25.0 0.4 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|150399077|ref|YP_001322844.1| - 9.7e-07 28.9 0.0 1.2e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Cupredoxin-like domain DUF2527 PF10736.9 gi|150399077|ref|YP_001322844.1| - 0.07 13.0 0.2 0.13 12.1 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) Lys_export PF03956.13 gi|150399078|ref|YP_001322845.1| - 1.2e-55 188.0 16.9 1.5e-55 187.7 16.9 1.0 1 0 0 1 1 1 1 Lysine exporter LysO Lys_export PF03956.13 gi|150399079|ref|YP_001322846.1| - 0.00011 21.8 4.5 0.00012 21.6 4.5 1.0 1 0 0 1 1 1 1 Lysine exporter LysO Sbt_1 PF05982.12 gi|150399079|ref|YP_001322846.1| - 0.0046 16.2 4.4 0.0053 16.1 4.4 1.0 1 0 0 1 1 1 1 Na+-dependent bicarbonate transporter superfamily Asp-Al_Ex PF06826.12 gi|150399079|ref|YP_001322846.1| - 0.0083 16.0 5.5 0.0097 15.7 5.5 1.1 1 0 0 1 1 1 1 Predicted Permease Membrane Region UPF0154 PF03672.13 gi|150399079|ref|YP_001322846.1| - 0.11 12.5 0.2 0.11 12.5 0.2 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) Myco_arth_vir_N PF09610.10 gi|150399079|ref|YP_001322846.1| - 0.25 11.5 0.6 0.25 11.5 0.6 2.4 2 0 0 2 2 2 0 Mycoplasma virulence signal region (Myco_arth_vir_N) Nre_N PF04894.12 gi|150399080|ref|YP_001322847.1| - 3.5e-100 335.3 0.0 4.4e-100 335.0 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|150399080|ref|YP_001322847.1| - 5e-38 129.4 0.0 8.6e-38 128.6 0.0 1.4 1 0 0 1 1 1 1 Archaeal Nre, C-terminal Trp_syntA PF00290.20 gi|150399081|ref|YP_001322848.1| - 7.3e-79 264.3 0.1 8.3e-79 264.1 0.1 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 gi|150399081|ref|YP_001322848.1| - 2.5e-08 33.7 0.0 1.4e-07 31.3 0.0 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein PA PF02225.22 gi|150399081|ref|YP_001322848.1| - 1e-05 25.4 0.0 0.13 12.3 0.0 2.3 2 0 0 2 2 2 2 PA domain FMN_dh PF01070.18 gi|150399081|ref|YP_001322848.1| - 1.5e-05 24.2 0.0 2.1e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 FMN-dependent dehydrogenase PcrB PF01884.17 gi|150399081|ref|YP_001322848.1| - 0.032 13.7 0.1 0.061 12.8 0.1 1.5 1 0 0 1 1 1 0 PcrB family NanE PF04131.14 gi|150399081|ref|YP_001322848.1| - 0.035 13.3 0.1 0.063 12.5 0.1 1.6 1 1 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase BtpA PF03437.15 gi|150399081|ref|YP_001322848.1| - 0.036 13.5 0.0 0.062 12.7 0.0 1.3 1 0 0 1 1 1 0 BtpA family TMP-TENI PF02581.17 gi|150399081|ref|YP_001322848.1| - 0.056 12.8 0.1 0.17 11.2 0.0 1.8 2 0 0 2 2 2 0 Thiamine monophosphate synthase Ribul_P_3_epim PF00834.19 gi|150399081|ref|YP_001322848.1| - 0.13 11.6 0.0 0.26 10.7 0.0 1.4 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family PALP PF00291.25 gi|150399082|ref|YP_001322849.1| - 1.3e-44 152.9 0.2 1.6e-44 152.5 0.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PRAI PF00697.22 gi|150399083|ref|YP_001322850.1| - 7.8e-26 91.0 0.1 9.5e-26 90.8 0.1 1.1 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Cep3 PF16846.5 gi|150399083|ref|YP_001322850.1| - 0.038 12.5 0.0 0.053 12.0 0.0 1.1 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit B Methyltr_RsmB-F PF01189.17 gi|150399083|ref|YP_001322850.1| - 0.058 13.0 0.0 0.08 12.6 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F QRPTase_C PF01729.19 gi|150399083|ref|YP_001322850.1| - 0.093 12.5 0.1 0.22 11.3 0.1 1.6 1 1 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain GATase PF00117.28 gi|150399084|ref|YP_001322851.1| - 1.1e-45 155.7 0.1 1.3e-45 155.5 0.1 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|150399084|ref|YP_001322851.1| - 4.8e-13 49.3 0.6 4.7e-12 46.1 0.6 2.0 1 1 0 1 1 1 1 Peptidase C26 Chorismate_bind PF00425.18 gi|150399085|ref|YP_001322852.1| - 3.2e-89 298.9 0.0 1.6e-88 296.7 0.0 1.8 2 0 0 2 2 2 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|150399085|ref|YP_001322852.1| - 1.5e-18 67.4 2.6 5.8e-17 62.2 0.3 2.6 2 1 0 2 2 2 2 Anthranilate synthase component I, N terminal region Glycos_transf_3 PF00591.21 gi|150399086|ref|YP_001322853.1| - 1.2e-78 264.3 0.0 1.4e-78 264.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|150399086|ref|YP_001322853.1| - 6.4e-14 51.5 0.5 1.3e-13 50.6 0.5 1.6 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain IGPS PF00218.21 gi|150399087|ref|YP_001322854.1| - 1.1e-52 178.8 1.3 1.2e-52 178.6 1.3 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 gi|150399087|ref|YP_001322854.1| - 0.0061 16.0 0.1 2.4 7.5 0.0 2.3 2 0 0 2 2 2 2 Histidine biosynthesis protein G3P_antiterm PF04309.12 gi|150399087|ref|YP_001322854.1| - 0.04 13.3 0.4 0.23 10.9 0.0 2.3 3 0 0 3 3 3 0 Glycerol-3-phosphate responsive antiterminator DUF2085 PF09858.9 gi|150399088|ref|YP_001322855.1| - 1.6e-30 105.4 3.4 1.6e-30 105.4 3.4 1.9 2 0 0 2 2 2 1 Predicted membrane protein (DUF2085) Pox_A14 PF05767.12 gi|150399088|ref|YP_001322855.1| - 1.1 9.5 8.0 2.4 8.4 0.3 2.6 1 1 0 2 2 2 0 Poxvirus virion envelope protein A14 Bac_export_2 PF01312.19 gi|150399088|ref|YP_001322855.1| - 7.3 5.7 6.4 9.3 5.3 6.4 1.2 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family MNHE PF01899.16 gi|150399088|ref|YP_001322855.1| - 9.1 6.0 9.1 1.4 8.7 0.3 2.6 3 0 0 3 3 3 0 Na+/H+ ion antiporter subunit DUF5518 PF17647.1 gi|150399089|ref|YP_001322856.1| - 0.084 13.0 33.1 0.47 10.6 33.1 2.1 1 1 0 1 1 1 0 Family of unknown function (DUF5518) DUF2254 PF10011.9 gi|150399089|ref|YP_001322856.1| - 0.26 10.1 5.7 0.1 11.4 1.0 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2254) Otopetrin PF03189.13 gi|150399089|ref|YP_001322856.1| - 0.5 9.1 2.3 0.57 8.9 2.3 1.2 1 0 0 1 1 1 0 Otopetrin Amidohydro_1 PF01979.20 gi|150399090|ref|YP_001322857.1| - 3.4e-18 66.1 0.8 2.3e-17 63.4 0.8 2.0 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|150399090|ref|YP_001322857.1| - 8e-07 28.9 0.0 0.00019 21.0 0.0 2.4 2 1 0 2 2 2 2 Amidohydrolase family PseudoU_synth_2 PF00849.22 gi|150399091|ref|YP_001322858.1| - 1.4e-28 100.0 0.3 2.4e-28 99.2 0.3 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase tRNA-synt_1c PF00749.21 gi|150399092|ref|YP_001322859.1| - 3.2e-80 269.4 0.0 5e-80 268.7 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|150399092|ref|YP_001322859.1| - 5.2e-29 101.3 0.2 1e-28 100.4 0.2 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1f PF01921.18 gi|150399092|ref|YP_001322859.1| - 0.00011 21.3 0.1 0.41 9.5 0.1 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1d PF00750.19 gi|150399092|ref|YP_001322859.1| - 0.022 13.7 0.0 0.047 12.6 0.0 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (R) Exo_endo_phos PF03372.23 gi|150399093|ref|YP_001322860.1| - 2.6e-22 79.5 0.0 3.2e-22 79.2 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|150399093|ref|YP_001322860.1| - 7.3e-06 25.8 0.0 1.4e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase SBP_bac_3 PF00497.20 gi|150399094|ref|YP_001322861.1| - 3e-46 157.7 0.3 3.4e-46 157.5 0.3 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 gi|150399094|ref|YP_001322861.1| - 6.4e-06 26.3 0.7 0.0014 18.8 0.7 2.4 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site Phosphonate-bd PF12974.7 gi|150399094|ref|YP_001322861.1| - 0.011 15.4 0.0 0.032 13.8 0.0 1.9 1 1 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.11 gi|150399094|ref|YP_001322861.1| - 0.015 15.2 0.1 0.03 14.2 0.0 1.6 2 0 0 2 2 2 0 NMT1/THI5 like Maelstrom PF13017.6 gi|150399094|ref|YP_001322861.1| - 0.066 12.9 0.4 0.12 12.0 0.0 1.6 2 0 0 2 2 2 0 piRNA pathway germ-plasm component CPSase_L_D2 PF02786.17 gi|150399095|ref|YP_001322862.1| - 2.1e-113 377.0 2.2 2.8e-77 259.0 0.2 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|150399095|ref|YP_001322862.1| - 2.4e-41 140.9 0.1 1.1e-40 138.8 0.1 2.1 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 gi|150399095|ref|YP_001322862.1| - 1.5e-19 70.0 1.9 7e-19 67.8 0.0 3.3 6 0 0 6 6 5 1 MGS-like domain Dala_Dala_lig_C PF07478.13 gi|150399095|ref|YP_001322862.1| - 4.1e-15 55.9 1.4 1.7e-06 27.7 0.1 2.6 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|150399095|ref|YP_001322862.1| - 1.6e-14 53.8 0.0 4.2e-06 26.5 0.0 2.7 2 1 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.22 gi|150399095|ref|YP_001322862.1| - 1.3e-13 50.8 0.9 4.5e-08 32.9 0.1 2.5 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|150399095|ref|YP_001322862.1| - 5.5e-12 46.0 1.9 3.9e-05 23.8 0.1 2.5 2 0 0 2 2 2 2 ATP-grasp domain GARS_A PF01071.19 gi|150399095|ref|YP_001322862.1| - 1.1e-07 31.8 0.9 0.00019 21.2 0.2 2.7 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RimK PF08443.11 gi|150399095|ref|YP_001322862.1| - 1.8e-05 24.4 0.4 0.0043 16.7 0.1 2.9 3 0 0 3 3 3 1 RimK-like ATP-grasp domain ID PF18543.1 gi|150399095|ref|YP_001322862.1| - 0.045 13.8 0.7 5.2 7.2 0.1 3.4 2 1 1 3 3 3 0 Intracellular delivery domain MA-Mit PF09245.10 gi|150399095|ref|YP_001322862.1| - 0.045 13.2 0.2 0.12 11.9 0.2 1.6 1 0 0 1 1 1 0 Mycoplasma arthritidis-derived mitogen SIS_2 PF13580.6 gi|150399095|ref|YP_001322862.1| - 0.066 13.2 0.1 0.35 10.9 0.0 2.3 2 0 0 2 2 2 0 SIS domain bPH_3 PF14470.6 gi|150399095|ref|YP_001322862.1| - 0.079 13.3 0.1 0.33 11.4 0.1 2.0 1 0 0 1 1 1 0 Bacterial PH domain Epimerase PF01370.21 gi|150399095|ref|YP_001322862.1| - 0.11 11.9 0.0 0.33 10.4 0.0 1.7 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Ribosomal_S13_N PF08069.12 gi|150399095|ref|YP_001322862.1| - 0.12 12.4 0.1 20 5.3 0.0 2.8 2 0 0 2 2 2 0 Ribosomal S13/S15 N-terminal domain Radical_SAM PF04055.21 gi|150399096|ref|YP_001322863.1| - 0.0018 18.7 0.0 0.006 17.0 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily CFTR_R PF14396.6 gi|150399096|ref|YP_001322863.1| - 0.019 14.5 0.0 0.038 13.6 0.0 1.4 1 0 0 1 1 1 0 Cystic fibrosis TM conductance regulator (CFTR), regulator domain CBFD_NFYB_HMF PF00808.23 gi|150399097|ref|YP_001322864.1| - 2.6e-11 43.6 1.9 4.7e-11 42.8 1.9 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|150399097|ref|YP_001322864.1| - 0.0001 22.6 1.1 0.0001 22.6 1.1 1.5 2 0 0 2 2 2 1 Core histone H2A/H2B/H3/H4 DUF1931 PF09123.11 gi|150399097|ref|YP_001322864.1| - 0.002 18.2 3.1 0.0023 18.0 3.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1931) DUF294_C PF10335.9 gi|150399097|ref|YP_001322864.1| - 0.018 14.8 0.8 0.023 14.5 0.8 1.1 1 0 0 1 1 1 0 Putative nucleotidyltransferase substrate binding domain DUF4071 PF13281.6 gi|150399097|ref|YP_001322864.1| - 0.022 13.8 3.0 0.027 13.5 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4071) Guanylin PF02058.15 gi|150399097|ref|YP_001322864.1| - 0.07 13.6 0.5 0.1 13.1 0.5 1.3 1 0 0 1 1 1 0 Guanylin precursor PBECR1 PF18809.1 gi|150399097|ref|YP_001322864.1| - 0.32 11.7 3.3 0.32 11.7 1.3 1.8 1 1 1 2 2 2 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1 DAPDH_C PF16654.5 gi|150399098|ref|YP_001322865.1| - 6.2e-75 250.2 0.0 1.1e-74 249.5 0.0 1.4 1 0 0 1 1 1 1 Diaminopimelic acid dehydrogenase C-terminal domain DapB_N PF01113.20 gi|150399098|ref|YP_001322865.1| - 3.5e-07 30.4 0.2 2e-06 28.0 0.1 2.1 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus F420_oxidored PF03807.17 gi|150399098|ref|YP_001322865.1| - 3.8e-05 24.2 0.0 7.8e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 gi|150399098|ref|YP_001322865.1| - 0.00026 21.8 0.0 0.00069 20.4 0.0 1.7 2 1 0 2 2 1 1 Oxidoreductase family, NAD-binding Rossmann fold CoA_binding PF02629.19 gi|150399098|ref|YP_001322865.1| - 0.00068 20.3 1.4 0.002 18.8 0.3 2.3 3 0 0 3 3 3 1 CoA binding domain Gp_dh_N PF00044.24 gi|150399098|ref|YP_001322865.1| - 0.0042 17.4 0.1 0.01 16.1 0.1 1.7 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|150399098|ref|YP_001322865.1| - 0.0074 15.7 0.1 0.013 14.9 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|150399098|ref|YP_001322865.1| - 0.0087 16.5 0.0 0.025 15.0 0.0 1.8 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|150399098|ref|YP_001322865.1| - 0.01 15.9 0.0 0.036 14.1 0.0 1.8 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_2 PF03446.15 gi|150399098|ref|YP_001322865.1| - 0.021 15.0 0.0 0.046 13.9 0.0 1.6 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_3 PF03447.16 gi|150399098|ref|YP_001322865.1| - 0.04 14.6 0.0 0.089 13.5 0.0 1.5 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain OCD_Mu_crystall PF02423.15 gi|150399098|ref|YP_001322865.1| - 0.05 12.5 0.0 0.077 11.9 0.0 1.2 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family PglD_N PF17836.1 gi|150399098|ref|YP_001322865.1| - 0.058 14.0 0.2 0.17 12.5 0.2 1.8 1 0 0 1 1 1 0 PglD N-terminal domain AdoHcyase_NAD PF00670.21 gi|150399098|ref|YP_001322865.1| - 0.1 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CBS PF00571.28 gi|150399099|ref|YP_001322866.1| - 3.5e-44 149.0 10.0 7.2e-12 45.6 0.2 4.3 4 0 0 4 4 4 4 CBS domain AA_kinase PF00696.28 gi|150399100|ref|YP_001322867.1| - 1e-54 185.7 0.6 1e-54 185.7 0.6 1.7 2 0 0 2 2 2 1 Amino acid kinase family ACT PF01842.25 gi|150399100|ref|YP_001322867.1| - 1.4e-16 59.9 0.3 2.5e-07 30.3 0.0 2.8 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 gi|150399100|ref|YP_001322867.1| - 1.1e-13 50.7 4.1 5.3e-08 32.5 0.0 3.0 3 0 0 3 3 3 2 ACT domain FAD-oxidase_C PF02913.19 gi|150399100|ref|YP_001322867.1| - 0.14 11.7 0.0 0.45 10.1 0.0 1.7 1 1 0 1 1 1 0 FAD linked oxidases, C-terminal domain Pox_vIL-18BP PF05566.12 gi|150399100|ref|YP_001322867.1| - 0.23 11.7 1.5 0.69 10.2 0.1 2.5 3 1 1 4 4 4 0 Orthopoxvirus interleukin 18 binding protein HMGL-like PF00682.19 gi|150399101|ref|YP_001322868.1| - 4.4e-80 269.0 0.9 4.4e-80 269.0 0.9 1.5 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 gi|150399101|ref|YP_001322868.1| - 2.3e-26 92.2 0.9 6.1e-26 90.9 0.9 1.8 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain PP-binding_2 PF14573.6 gi|150399101|ref|YP_001322868.1| - 0.054 13.7 0.3 2.2 8.6 0.0 3.1 3 0 0 3 3 3 0 Acyl-carrier DUF4974 PF16344.5 gi|150399101|ref|YP_001322868.1| - 0.082 12.9 0.1 2.4 8.2 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4974) MCM PF00493.23 gi|150399102|ref|YP_001322869.1| - 5.9e-75 251.2 0.0 1.3e-74 250.1 0.0 1.6 2 0 0 2 2 2 1 MCM P-loop domain MCM_lid PF17855.1 gi|150399102|ref|YP_001322869.1| - 1.2e-20 73.7 2.0 9.1e-20 70.9 0.2 2.7 2 0 0 2 2 2 1 MCM AAA-lid domain MCM_OB PF17207.3 gi|150399102|ref|YP_001322869.1| - 9.2e-16 57.8 1.1 1.7e-15 57.0 0.3 1.9 2 0 0 2 2 2 1 MCM OB domain Mg_chelatase PF01078.21 gi|150399102|ref|YP_001322869.1| - 3.2e-10 39.7 0.0 9.1e-07 28.5 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|150399102|ref|YP_001322869.1| - 3e-08 33.8 0.0 5.7e-08 32.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|150399102|ref|YP_001322869.1| - 0.041 14.3 0.0 0.1 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_3 PF07726.11 gi|150399102|ref|YP_001322869.1| - 0.049 13.5 0.0 0.69 9.8 0.0 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|150399102|ref|YP_001322869.1| - 0.088 13.1 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|150399102|ref|YP_001322869.1| - 0.14 11.9 0.2 0.37 10.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain SL4P PF17618.2 gi|150399102|ref|YP_001322869.1| - 0.51 10.4 3.8 7.2 6.7 0.1 3.2 4 0 0 4 4 4 0 Uncharacterized Strongylid L4 protein tRNA-synt_1d PF00750.19 gi|150399104|ref|YP_001322871.1| - 1.4e-33 116.3 5.4 2.2e-33 115.6 5.4 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|150399104|ref|YP_001322871.1| - 1.9e-29 102.3 6.8 3e-29 101.6 0.1 3.1 3 0 0 3 3 3 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|150399104|ref|YP_001322871.1| - 2.6e-18 66.4 2.6 6.3e-18 65.1 0.2 3.0 4 0 0 4 4 4 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 gi|150399104|ref|YP_001322871.1| - 2.9e-05 23.6 0.5 5.5e-05 22.7 0.5 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|150399104|ref|YP_001322871.1| - 3.5e-05 22.9 0.2 0.27 10.1 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|150399104|ref|YP_001322871.1| - 0.015 14.0 3.8 4.1 6.1 0.1 3.7 4 1 1 5 5 5 0 tRNA synthetases class I (M) SKIP_SNW PF02731.15 gi|150399104|ref|YP_001322871.1| - 3.9 7.1 5.8 1.1 9.0 0.8 2.4 2 0 0 2 2 2 0 SKIP/SNW domain FbpA PF05833.11 gi|150399105|ref|YP_001322872.1| - 1.2e-71 241.9 25.2 1.7e-71 241.3 25.2 1.2 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|150399105|ref|YP_001322872.1| - 3.5e-23 82.3 0.2 1.1e-22 80.7 0.0 2.0 2 0 0 2 2 2 1 NFACT protein RNA binding domain DUF4624 PF15417.6 gi|150399106|ref|YP_001322873.1| - 0.013 15.4 0.6 0.021 14.7 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4624) RGI1 PF10843.8 gi|150399106|ref|YP_001322873.1| - 0.018 14.7 1.1 0.021 14.5 1.1 1.2 1 0 0 1 1 1 0 Respiratory growth induced protein 1 EMC3_TMCO1 PF01956.16 gi|150399107|ref|YP_001322874.1| - 2e-25 89.5 9.2 2.5e-25 89.2 9.2 1.1 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like 60KD_IMP PF02096.20 gi|150399107|ref|YP_001322874.1| - 0.00057 19.8 6.2 0.00087 19.2 6.2 1.4 1 1 0 1 1 1 1 60Kd inner membrane protein DUF2208 PF09973.9 gi|150399107|ref|YP_001322874.1| - 0.029 14.0 5.4 0.049 13.2 5.4 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) V-ATPase_C PF03223.15 gi|150399107|ref|YP_001322874.1| - 0.11 11.9 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 V-ATPase subunit C H-kinase_dim PF02895.14 gi|150399107|ref|YP_001322874.1| - 1.7 9.1 3.9 2.5 8.5 3.9 1.2 1 0 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain DUF4199 PF13858.6 gi|150399107|ref|YP_001322874.1| - 2.4 8.5 13.1 0.21 12.0 7.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) T2SSF PF00482.23 gi|150399107|ref|YP_001322874.1| - 3.4 7.6 8.0 0.74 9.8 0.8 2.2 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein F DUF1003 PF06210.11 gi|150399107|ref|YP_001322874.1| - 3.4 7.8 8.0 0.1 12.7 1.9 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1003) AAA_17 PF13207.6 gi|150399108|ref|YP_001322875.1| - 1.2e-37 129.4 0.3 1.5e-37 129.1 0.3 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|150399108|ref|YP_001322875.1| - 2.6e-09 37.7 0.0 4.1e-09 37.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|150399108|ref|YP_001322875.1| - 0.002 18.0 0.3 0.0041 17.1 0.2 1.5 1 1 0 1 1 1 1 NTPase KTI12 PF08433.10 gi|150399108|ref|YP_001322875.1| - 0.0034 16.9 0.0 0.0038 16.7 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_7 PF12775.7 gi|150399108|ref|YP_001322875.1| - 0.0039 16.7 0.1 0.0061 16.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF4449 PF14613.6 gi|150399108|ref|YP_001322875.1| - 0.011 15.9 0.6 0.017 15.2 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) NB-ARC PF00931.22 gi|150399108|ref|YP_001322875.1| - 0.013 14.7 0.9 0.15 11.2 0.2 2.2 1 1 0 2 2 2 0 NB-ARC domain ATPase_2 PF01637.18 gi|150399108|ref|YP_001322875.1| - 0.013 15.4 0.4 0.047 13.6 0.1 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea MoCF_biosynth PF00994.24 gi|150399108|ref|YP_001322875.1| - 0.015 15.0 0.0 0.053 13.2 0.0 1.9 2 0 0 2 2 2 0 Probable molybdopterin binding domain AAA_30 PF13604.6 gi|150399108|ref|YP_001322875.1| - 0.017 14.9 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|150399108|ref|YP_001322875.1| - 0.022 15.1 0.4 0.036 14.4 0.4 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|150399108|ref|YP_001322875.1| - 0.024 14.6 0.1 0.039 14.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|150399108|ref|YP_001322875.1| - 0.026 14.8 0.0 0.037 14.3 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|150399108|ref|YP_001322875.1| - 0.026 14.9 0.0 0.053 13.9 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain MeaB PF03308.16 gi|150399108|ref|YP_001322875.1| - 0.042 12.8 0.4 0.097 11.6 0.2 1.7 1 1 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF3853 PF12964.7 gi|150399108|ref|YP_001322875.1| - 0.063 13.5 0.1 4.1 7.6 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3853) NACHT PF05729.12 gi|150399108|ref|YP_001322875.1| - 0.085 12.8 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 NACHT domain DUF2075 PF09848.9 gi|150399108|ref|YP_001322875.1| - 0.097 11.9 0.1 0.15 11.3 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_33 PF13671.6 gi|150399108|ref|YP_001322875.1| - 0.14 12.3 0.2 0.43 10.7 0.2 1.9 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|150399108|ref|YP_001322875.1| - 0.15 11.7 0.0 0.26 11.0 0.0 1.6 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase tRNA_anti-codon PF01336.25 gi|150399109|ref|YP_001322876.1| - 1.7e-44 149.7 9.9 2.2e-11 43.6 0.2 6.2 5 1 1 6 6 6 4 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 gi|150399109|ref|YP_001322876.1| - 3e-20 72.9 6.1 1.4e-05 25.0 0.1 5.3 5 0 0 5 5 5 5 Cell division control protein 24, OB domain 3 REPA_OB_2 PF16900.5 gi|150399109|ref|YP_001322876.1| - 4.4e-16 58.6 17.0 0.00023 21.0 0.0 5.1 6 0 0 6 6 5 4 Replication protein A OB domain Rep_fac-A_C PF08646.10 gi|150399109|ref|YP_001322876.1| - 1.6e-13 50.7 2.6 7.5e-07 29.0 0.1 4.7 5 0 0 5 5 5 2 Replication factor-A C terminal domain DUF3127 PF11325.8 gi|150399109|ref|YP_001322876.1| - 4.1e-07 30.1 1.8 0.00066 19.9 0.2 4.2 4 0 0 4 4 4 1 Domain of unknown function (DUF3127) tRNA_anti_2 PF13742.6 gi|150399109|ref|YP_001322876.1| - 0.00073 19.7 0.4 0.42 10.8 0.0 4.4 4 0 0 4 4 4 1 OB-fold nucleic acid binding domain TF_Zn_Ribbon PF08271.12 gi|150399109|ref|YP_001322876.1| - 0.0017 17.9 1.5 0.0049 16.4 1.5 1.8 1 0 0 1 1 1 1 TFIIB zinc-binding DUF5088 PF17008.5 gi|150399109|ref|YP_001322876.1| - 0.0032 17.2 3.0 6 6.6 0.0 3.5 1 1 0 3 3 3 1 Domain of unknown function (DUF5088) DZR PF12773.7 gi|150399109|ref|YP_001322876.1| - 0.0035 17.3 0.6 0.0066 16.5 0.6 1.3 1 0 0 1 1 1 1 Double zinc ribbon RMI2 PF16100.5 gi|150399109|ref|YP_001322876.1| - 0.0096 15.7 0.3 0.34 10.7 0.0 3.3 2 1 0 3 3 3 1 RecQ-mediated genome instability protein 2 zinc-ribbons_6 PF07191.12 gi|150399109|ref|YP_001322876.1| - 0.013 15.4 0.4 0.023 14.7 0.4 1.3 1 0 0 1 1 1 0 zinc-ribbons Prok-RING_1 PF14446.6 gi|150399109|ref|YP_001322876.1| - 0.087 12.8 0.5 0.17 11.8 0.5 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 OrfB_Zn_ribbon PF07282.11 gi|150399109|ref|YP_001322876.1| - 0.11 12.5 2.4 0.48 10.4 2.1 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain DUF2240 PF09999.9 gi|150399109|ref|YP_001322876.1| - 0.11 12.1 0.1 0.22 11.1 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) NinF PF05810.12 gi|150399109|ref|YP_001322876.1| - 0.14 12.1 0.1 0.27 11.1 0.1 1.4 1 0 0 1 1 1 0 NinF protein DUF2536 PF10750.9 gi|150399109|ref|YP_001322876.1| - 0.15 12.0 0.8 0.46 10.4 0.8 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2536) zinc_ribbon_2 PF13240.6 gi|150399109|ref|YP_001322876.1| - 0.98 9.2 2.9 2.3 8.0 2.9 1.6 1 0 0 1 1 1 0 zinc-ribbon domain HTH_46 PF15977.5 gi|150399109|ref|YP_001322876.1| - 0.98 9.5 3.7 2.8 8.0 0.0 3.4 4 0 0 4 4 3 0 Winged helix-turn-helix DNA binding HCBP_related PF06594.11 gi|150399109|ref|YP_001322876.1| - 1 9.4 4.7 19 5.3 0.1 4.4 4 1 0 4 4 4 0 Haemolysin-type calcium binding protein related domain DUF5398 PF17376.2 gi|150399109|ref|YP_001322876.1| - 1.1 9.9 4.3 1.2 9.8 0.0 2.9 3 0 0 3 3 3 0 Family of unknown function (DUF5398) HEAT PF02985.22 gi|150399110|ref|YP_001322877.1| - 3.2e-07 30.1 0.0 11 6.5 0.0 8.0 8 0 0 8 8 8 1 HEAT repeat HEAT_2 PF13646.6 gi|150399110|ref|YP_001322877.1| - 3.4e-06 27.3 0.0 0.0042 17.4 0.0 4.5 5 1 1 6 6 6 2 HEAT repeats Cnd1 PF12717.7 gi|150399110|ref|YP_001322877.1| - 0.0054 16.8 12.1 0.4 10.7 0.0 5.0 3 1 1 5 5 5 2 non-SMC mitotic condensation complex subunit 1 NB-ARC PF00931.22 gi|150399110|ref|YP_001322877.1| - 0.015 14.5 0.1 0.033 13.4 0.1 1.5 1 0 0 1 1 1 0 NB-ARC domain HEAT_EZ PF13513.6 gi|150399110|ref|YP_001322877.1| - 0.036 14.6 0.0 5 7.7 0.0 3.8 3 0 0 3 3 3 0 HEAT-like repeat RTP1_C1 PF10363.9 gi|150399110|ref|YP_001322877.1| - 0.051 13.7 3.4 4.6 7.5 0.0 4.7 5 1 0 5 5 5 0 Required for nuclear transport of RNA pol II C-terminus 1 Thymidylate_kin PF02223.17 gi|150399111|ref|YP_001322878.1| - 2.7e-43 147.8 1.1 3.5e-43 147.4 1.1 1.1 1 0 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 gi|150399111|ref|YP_001322878.1| - 1.7e-08 34.5 2.6 2.4e-07 30.8 2.6 2.1 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_18 PF13238.6 gi|150399111|ref|YP_001322878.1| - 2.9e-08 34.3 0.1 1e-07 32.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|150399111|ref|YP_001322878.1| - 1.3e-06 28.9 0.9 3.4e-06 27.5 0.5 1.9 1 1 1 2 2 2 1 AAA domain SKI PF01202.22 gi|150399111|ref|YP_001322878.1| - 2e-05 24.8 0.1 0.21 11.7 0.0 2.3 2 0 0 2 2 2 2 Shikimate kinase AAA_28 PF13521.6 gi|150399111|ref|YP_001322878.1| - 5.4e-05 23.5 0.0 7.5e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|150399111|ref|YP_001322878.1| - 0.00012 21.9 0.0 0.043 13.5 0.0 2.1 1 1 1 2 2 2 2 Cytidylate kinase AAA_33 PF13671.6 gi|150399111|ref|YP_001322878.1| - 0.00018 21.7 0.1 0.00061 20.0 0.1 1.8 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|150399111|ref|YP_001322878.1| - 0.0041 16.8 0.3 0.1 12.2 0.0 2.4 3 0 0 3 3 3 1 SRP54-type protein, GTPase domain AAA_22 PF13401.6 gi|150399111|ref|YP_001322878.1| - 0.0051 17.1 0.1 0.015 15.5 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|150399111|ref|YP_001322878.1| - 0.014 15.8 0.4 0.027 14.9 0.4 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Arf PF00025.21 gi|150399111|ref|YP_001322878.1| - 0.017 14.6 0.9 0.21 11.0 0.0 2.4 1 1 0 2 2 2 0 ADP-ribosylation factor family APS_kinase PF01583.20 gi|150399111|ref|YP_001322878.1| - 0.034 14.1 0.0 0.05 13.5 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_24 PF13479.6 gi|150399111|ref|YP_001322878.1| - 0.074 12.8 0.5 2.9 7.6 0.1 2.2 2 0 0 2 2 2 0 AAA domain UPF0180 PF03698.13 gi|150399111|ref|YP_001322878.1| - 0.089 13.0 0.0 0.27 11.4 0.0 1.9 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) ABC_tran PF00005.27 gi|150399111|ref|YP_001322878.1| - 0.099 13.2 0.0 0.13 12.8 0.0 1.3 1 0 0 1 1 1 0 ABC transporter ADK PF00406.22 gi|150399111|ref|YP_001322878.1| - 0.62 10.1 3.6 12 5.9 3.6 2.7 1 1 0 1 1 1 0 Adenylate kinase NfeD PF01957.18 gi|150399112|ref|YP_001322879.1| - 7.9e-10 39.0 0.1 1.3e-09 38.2 0.1 1.5 1 1 0 1 1 1 1 NfeD-like C-terminal, partner-binding Band_7 PF01145.25 gi|150399113|ref|YP_001322880.1| - 1.9e-36 125.8 1.8 2.6e-36 125.3 1.8 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|150399113|ref|YP_001322880.1| - 0.045 13.5 0.1 0.079 12.7 0.1 1.4 1 0 0 1 1 1 0 SPFH domain-Band 7 family SPOUT_MTase PF02590.17 gi|150399114|ref|YP_001322881.1| - 9.1e-58 194.6 0.2 1e-57 194.4 0.2 1.0 1 0 0 1 1 1 1 Predicted SPOUT methyltransferase Flo11 PF10182.9 gi|150399114|ref|YP_001322881.1| - 0.052 13.7 0.1 0.096 12.8 0.1 1.4 1 0 0 1 1 1 0 Flo11 domain DUF3552 PF12072.8 gi|150399115|ref|YP_001322882.1| - 0.34 10.3 17.5 6.6 6.1 17.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) vATP-synt_E PF01991.18 gi|150399115|ref|YP_001322882.1| - 0.88 8.9 16.3 1.1 8.6 15.9 1.4 1 1 0 1 1 1 0 ATP synthase (E/31 kDa) subunit ATP-synt_B PF00430.18 gi|150399115|ref|YP_001322882.1| - 1.1 9.4 16.3 12 6.0 16.3 2.0 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) TP53IP5 PF15331.6 gi|150399115|ref|YP_001322882.1| - 1.9 8.6 6.8 2 8.5 6.8 1.0 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 DivIVA PF05103.13 gi|150399115|ref|YP_001322882.1| - 6.2 6.9 16.1 7.1e+02 0.3 16.1 2.1 1 1 0 1 1 1 0 DivIVA protein Rota_VP2 PF05087.12 gi|150399115|ref|YP_001322882.1| - 7.2 4.6 10.6 7.6 4.5 10.6 1.0 1 0 0 1 1 1 0 Rotavirus VP2 protein V_ATPase_I PF01496.19 gi|150399116|ref|YP_001322883.1| - 1.1e-27 96.4 6.5 3e-14 51.9 0.0 3.1 3 0 0 3 3 3 2 V-type ATPase 116kDa subunit family ATP-synt_C PF00137.21 gi|150399117|ref|YP_001322884.1| - 2.7e-48 162.2 52.2 3.2e-17 62.6 11.3 3.2 3 0 0 3 3 3 3 ATP synthase subunit C vATP-synt_E PF01991.18 gi|150399118|ref|YP_001322885.1| - 1.4e-33 116.0 17.7 1.5e-33 115.9 17.7 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit HrpE PF06188.12 gi|150399118|ref|YP_001322885.1| - 0.005 16.7 5.9 0.005 16.7 5.9 2.2 2 1 1 3 3 3 1 HrpE/YscL/FliH and V-type ATPase subunit E DUF2252 PF10009.9 gi|150399118|ref|YP_001322885.1| - 0.021 13.9 1.1 0.027 13.6 1.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) ATP-synt_B PF00430.18 gi|150399118|ref|YP_001322885.1| - 0.19 11.8 20.7 0.23 11.6 18.1 2.1 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) DUF3552 PF12072.8 gi|150399118|ref|YP_001322885.1| - 0.21 11.0 24.0 0.05 13.0 21.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) GTP-bdg_M PF16360.5 gi|150399118|ref|YP_001322885.1| - 0.4 11.3 9.3 71 4.1 8.9 2.9 2 1 0 2 2 2 0 GTP-binding GTPase Middle Region YARHG PF13308.6 gi|150399118|ref|YP_001322885.1| - 0.76 9.7 3.5 26 4.8 0.3 3.3 2 1 1 3 3 3 0 YARHG domain CCDC-167 PF15188.6 gi|150399118|ref|YP_001322885.1| - 0.8 10.1 13.3 1.7 9.0 10.1 2.6 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 vATP-synt_AC39 PF01992.16 gi|150399119|ref|YP_001322886.1| - 6.4e-84 282.3 4.2 7.3e-84 282.1 4.2 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit MerR-DNA-bind PF09278.11 gi|150399119|ref|YP_001322886.1| - 0.0064 17.0 0.7 1.5 9.4 0.3 3.5 4 0 0 4 4 4 1 MerR, DNA binding ATP-synt_F PF01990.17 gi|150399120|ref|YP_001322887.1| - 4.4e-19 68.6 1.3 5.1e-19 68.4 1.3 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit ATP-synt_ab PF00006.25 gi|150399121|ref|YP_001322888.1| - 1.5e-90 302.5 0.0 3.5e-90 301.3 0.0 1.6 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|150399121|ref|YP_001322888.1| - 9.4e-45 151.4 0.2 2e-44 150.3 0.2 1.6 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|150399121|ref|YP_001322888.1| - 7.2e-14 52.1 5.0 2.9e-13 50.1 5.0 2.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain RnfC_N PF13375.6 gi|150399121|ref|YP_001322888.1| - 0.0068 16.3 2.6 0.024 14.6 0.3 2.4 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain Peptidase_M23 PF01551.22 gi|150399121|ref|YP_001322888.1| - 0.043 14.0 0.5 1.8 8.9 0.0 2.6 2 0 0 2 2 2 0 Peptidase family M23 AAA_22 PF13401.6 gi|150399121|ref|YP_001322888.1| - 0.19 12.0 0.0 0.4 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 gi|150399122|ref|YP_001322889.1| - 1.4e-67 227.5 0.0 1.8e-67 227.1 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|150399122|ref|YP_001322889.1| - 2.4e-10 40.8 1.8 2.4e-10 40.8 1.8 2.0 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|150399122|ref|YP_001322889.1| - 0.0021 18.2 2.6 0.0026 17.9 1.2 1.9 2 0 0 2 2 2 1 HAS barrel domain ATP-synt_D PF01813.17 gi|150399123|ref|YP_001322890.1| - 6.8e-62 208.8 9.1 7.7e-62 208.6 9.1 1.0 1 0 0 1 1 1 1 ATP synthase subunit D TPD52 PF04201.15 gi|150399123|ref|YP_001322890.1| - 0.32 10.6 4.5 1.1 8.9 0.6 2.2 2 0 0 2 2 2 0 Tumour protein D52 family Exonuc_VII_S PF02609.16 gi|150399123|ref|YP_001322890.1| - 0.39 10.8 5.6 1.2 9.2 0.4 2.8 2 0 0 2 2 2 0 Exonuclease VII small subunit DUF22 PF01629.16 gi|150399124|ref|YP_001322891.1| - 5.9e-18 64.5 0.2 7.4e-18 64.2 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF22 Lip_prot_lig_C PF10437.9 gi|150399124|ref|YP_001322891.1| - 2.6 8.1 5.2 6.8 6.7 0.1 2.8 2 1 1 3 3 3 0 Bacterial lipoate protein ligase C-terminus DUF61 PF01886.16 gi|150399125|ref|YP_001322892.1| - 2.5e-31 108.3 3.9 2.9e-31 108.1 3.9 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF61 Tn916-Xis PF09035.10 gi|150399125|ref|YP_001322892.1| - 0.013 15.7 0.1 0.032 14.4 0.1 1.6 1 0 0 1 1 1 0 Excisionase from transposon Tn916 DUF4982 PF16355.5 gi|150399125|ref|YP_001322892.1| - 0.017 15.1 0.0 0.027 14.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4982) HTH_17 PF12728.7 gi|150399125|ref|YP_001322892.1| - 0.047 13.9 0.1 0.11 12.6 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MrpF_PhaF PF04066.13 gi|150399126|ref|YP_001322893.1| - 3.3e-05 24.2 4.9 3.3e-05 24.2 4.9 1.5 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) K1 PF02960.14 gi|150399126|ref|YP_001322893.1| - 0.098 12.8 2.3 0.087 12.9 1.4 1.5 1 1 0 1 1 1 0 K1 glycoprotein DUF202 PF02656.15 gi|150399126|ref|YP_001322893.1| - 0.32 11.5 3.8 0.54 10.7 3.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF202) NYN PF01936.18 gi|150399127|ref|YP_001322894.1| - 5.5e-25 88.6 0.2 8.7e-25 87.9 0.2 1.2 1 0 0 1 1 1 1 NYN domain SurE PF01975.17 gi|150399128|ref|YP_001322895.1| - 4.3e-52 176.7 0.0 5.2e-52 176.5 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE DUF3898 PF13037.6 gi|150399128|ref|YP_001322895.1| - 0.059 13.5 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3898) CENP-L PF13092.6 gi|150399128|ref|YP_001322895.1| - 0.11 12.7 0.0 2.2 8.5 0.0 2.5 3 0 0 3 3 3 0 Kinetochore complex Sim4 subunit Fta1 HTH_24 PF13412.6 gi|150399129|ref|YP_001322896.1| - 3.5e-13 48.9 0.6 6.3e-13 48.1 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_45 PF14947.6 gi|150399129|ref|YP_001322896.1| - 1.6e-05 24.8 0.5 4.4e-05 23.4 0.2 2.0 2 0 0 2 2 1 1 Winged helix-turn-helix HTH_Crp_2 PF13545.6 gi|150399129|ref|YP_001322896.1| - 9.5e-05 22.3 0.0 0.00024 21.0 0.0 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|150399129|ref|YP_001322896.1| - 0.00023 21.0 0.0 0.00049 19.9 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|150399129|ref|YP_001322896.1| - 0.00051 19.9 0.1 0.0014 18.5 0.1 1.7 1 0 0 1 1 1 1 MarR family DUF4423 PF14394.6 gi|150399129|ref|YP_001322896.1| - 0.00077 19.2 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) RepL PF05732.11 gi|150399129|ref|YP_001322896.1| - 0.00092 18.7 0.1 0.0017 17.8 0.1 1.4 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_11 PF08279.12 gi|150399129|ref|YP_001322896.1| - 0.001 19.0 0.0 0.0026 17.7 0.0 1.7 1 0 0 1 1 1 1 HTH domain Mrr_N PF14338.6 gi|150399129|ref|YP_001322896.1| - 0.0018 18.4 0.0 0.0043 17.1 0.0 1.8 1 1 0 1 1 1 1 Mrr N-terminal domain HTH_12 PF08461.10 gi|150399129|ref|YP_001322896.1| - 0.0054 16.6 0.1 0.014 15.4 0.1 1.8 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain GerE PF00196.19 gi|150399129|ref|YP_001322896.1| - 0.0091 15.5 0.0 0.024 14.2 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_27 PF13463.6 gi|150399129|ref|YP_001322896.1| - 0.012 16.1 0.0 0.022 15.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_3 PF01381.22 gi|150399129|ref|YP_001322896.1| - 0.016 15.2 0.0 0.084 13.0 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix HTH_20 PF12840.7 gi|150399129|ref|YP_001322896.1| - 0.034 14.2 0.0 0.057 13.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 gi|150399129|ref|YP_001322896.1| - 0.035 13.9 0.0 0.13 12.1 0.0 1.9 1 0 0 1 1 1 0 HTH DNA binding domain HTH_5 PF01022.20 gi|150399129|ref|YP_001322896.1| - 0.066 13.1 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_34 PF13601.6 gi|150399129|ref|YP_001322896.1| - 0.09 13.0 0.1 0.37 11.0 0.0 2.1 2 1 0 2 2 1 0 Winged helix DNA-binding domain TrmB PF01978.19 gi|150399129|ref|YP_001322896.1| - 0.091 12.7 0.0 0.28 11.1 0.0 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB SMC_ScpB PF04079.16 gi|150399129|ref|YP_001322896.1| - 0.15 11.7 0.1 0.3 10.7 0.1 1.4 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB RuvB_C PF05491.13 gi|150399129|ref|YP_001322896.1| - 0.15 11.9 0.8 0.29 11.0 0.1 1.8 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain CCG PF02754.16 gi|150399130|ref|YP_001322897.1| - 1.4e-39 134.2 3.1 9.2e-19 67.4 0.3 2.3 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|150399131|ref|YP_001322898.1| - 3e-10 40.4 7.3 6.3e-10 39.4 7.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399131|ref|YP_001322898.1| - 4.9e-10 39.4 6.5 1.1e-09 38.3 6.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399131|ref|YP_001322898.1| - 4e-09 36.5 7.3 8.4e-09 35.4 7.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399131|ref|YP_001322898.1| - 4.1e-09 36.9 7.6 4.1e-09 36.9 7.6 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399131|ref|YP_001322898.1| - 3.4e-06 27.6 9.1 8e-06 26.4 9.2 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399131|ref|YP_001322898.1| - 0.00098 18.8 12.6 0.034 14.0 2.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|150399131|ref|YP_001322898.1| - 0.0015 19.4 9.9 0.089 13.7 0.3 2.5 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|150399131|ref|YP_001322898.1| - 0.0016 18.5 6.4 0.0038 17.3 6.4 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399131|ref|YP_001322898.1| - 0.0032 17.5 12.3 0.1 12.7 2.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399131|ref|YP_001322898.1| - 0.0093 16.4 12.2 0.091 13.3 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|150399131|ref|YP_001322898.1| - 0.2 12.6 16.6 0.56 11.3 3.2 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|150399131|ref|YP_001322898.1| - 0.69 9.7 9.3 0.11 12.2 1.1 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_6 PF12837.7 gi|150399131|ref|YP_001322898.1| - 1.1 9.5 11.8 4.3 7.6 2.7 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|150399131|ref|YP_001322898.1| - 2.2 8.5 9.0 5.5 7.2 1.2 2.7 1 1 2 3 3 3 0 4Fe-4S dicluster domain DUF167 PF02594.16 gi|150399132|ref|YP_001322899.1| - 4.8e-18 65.1 0.8 6e-18 64.7 0.8 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Z1 PF10593.9 gi|150399132|ref|YP_001322899.1| - 0.0076 15.8 0.3 0.0076 15.8 0.3 1.0 1 0 0 1 1 1 1 Z1 domain YcaO PF02624.16 gi|150399133|ref|YP_001322900.1| - 9e-81 271.6 0.0 1.3e-80 271.1 0.0 1.2 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding DUF1722 PF08349.11 gi|150399134|ref|YP_001322901.1| - 1.2e-34 119.1 0.6 2.7e-34 118.0 0.6 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) DUF523 PF04463.12 gi|150399134|ref|YP_001322901.1| - 3.8e-33 114.4 0.0 6.6e-33 113.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF523) tRNA-synt_1e PF01406.19 gi|150399135|ref|YP_001322902.1| - 1.5e-133 444.8 1.1 2.3e-133 444.2 1.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|150399135|ref|YP_001322902.1| - 2.2e-17 62.9 1.6 5.3e-08 32.0 0.1 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 gi|150399135|ref|YP_001322902.1| - 7e-09 35.1 2.0 3e-05 23.1 0.0 2.5 3 0 0 3 3 3 2 tRNA synthetases class I (K) DALR_2 PF09190.11 gi|150399135|ref|YP_001322902.1| - 1.6e-08 34.9 0.0 4.3e-08 33.5 0.0 1.7 1 0 0 1 1 1 1 DALR domain tRNA-synt_1 PF00133.22 gi|150399135|ref|YP_001322902.1| - 3.3e-07 29.0 0.0 1.6e-05 23.4 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1c PF00749.21 gi|150399135|ref|YP_001322902.1| - 0.0015 17.5 2.0 0.0017 17.3 0.1 2.1 3 0 0 3 3 3 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1d PF00750.19 gi|150399135|ref|YP_001322902.1| - 0.017 14.1 0.1 0.017 14.1 0.1 2.1 3 1 1 4 4 4 0 tRNA synthetases class I (R) UPF0029 PF01205.19 gi|150399136|ref|YP_001322903.1| - 4.9e-29 100.8 0.0 7.3e-29 100.2 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF1949 PF09186.11 gi|150399136|ref|YP_001322903.1| - 0.00014 21.7 0.1 0.00028 20.7 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1949) Lon_C PF05362.13 gi|150399137|ref|YP_001322904.1| - 2.7e-11 43.4 0.1 6.3e-11 42.2 0.1 1.6 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain ChlI PF13541.6 gi|150399137|ref|YP_001322904.1| - 0.032 14.1 0.0 0.16 11.8 0.0 2.1 2 0 0 2 2 2 0 Subunit ChlI of Mg-chelatase HMGL-like PF00682.19 gi|150399138|ref|YP_001322905.1| - 1.8e-92 309.7 0.4 1.8e-92 309.7 0.4 2.1 2 1 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 gi|150399138|ref|YP_001322905.1| - 3.7e-33 114.3 5.9 7.9e-33 113.2 5.9 1.6 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain DUF1308 PF07000.11 gi|150399138|ref|YP_001322905.1| - 0.068 13.1 0.8 0.15 12.0 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1308) RP854 PF17460.2 gi|150399138|ref|YP_001322905.1| - 0.3 10.8 2.0 1.6 8.4 0.0 2.6 2 1 0 3 3 3 0 Uncharacterized protein RP854 CYTH PF01928.21 gi|150399139|ref|YP_001322906.1| - 1e-32 113.5 3.4 1.2e-32 113.3 3.4 1.0 1 0 0 1 1 1 1 CYTH domain DFF40 PF09230.10 gi|150399139|ref|YP_001322906.1| - 0.063 12.9 0.2 0.089 12.4 0.2 1.3 1 0 0 1 1 1 0 DNA fragmentation factor 40 kDa RNA_pol_Rpb1_5 PF04998.17 gi|150399139|ref|YP_001322906.1| - 0.093 12.1 1.2 0.15 11.4 1.0 1.4 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 5 Rrf2 PF02082.20 gi|150399140|ref|YP_001322907.1| - 3.2e-07 30.6 0.0 7.1e-07 29.5 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator ACT_4 PF13291.6 gi|150399140|ref|YP_001322907.1| - 0.0001 22.8 0.9 0.00019 21.9 0.9 1.5 1 0 0 1 1 1 1 ACT domain HrcA_DNA-bdg PF03444.15 gi|150399140|ref|YP_001322907.1| - 0.00032 20.3 0.0 0.00057 19.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_5 PF01022.20 gi|150399140|ref|YP_001322907.1| - 0.00054 19.8 0.0 0.00098 18.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|150399140|ref|YP_001322907.1| - 0.0031 17.5 5.6 0.0058 16.6 1.7 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_11 PF08279.12 gi|150399140|ref|YP_001322907.1| - 0.0037 17.2 0.1 0.0087 16.0 0.1 1.6 1 0 0 1 1 1 1 HTH domain ACT_6 PF13740.6 gi|150399140|ref|YP_001322907.1| - 0.0073 16.3 0.0 0.021 14.8 0.0 1.8 2 0 0 2 2 2 1 ACT domain HTH_20 PF12840.7 gi|150399140|ref|YP_001322907.1| - 0.014 15.4 0.0 0.023 14.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|150399140|ref|YP_001322907.1| - 0.029 14.6 0.0 0.061 13.5 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|150399140|ref|YP_001322907.1| - 0.035 14.0 0.0 0.061 13.2 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Abi_2 PF07751.11 gi|150399140|ref|YP_001322907.1| - 0.12 12.6 0.1 0.26 11.5 0.0 1.5 2 0 0 2 2 2 0 Abi-like protein ACT PF01842.25 gi|150399140|ref|YP_001322907.1| - 0.12 12.1 0.5 0.59 10.0 0.2 2.2 2 1 1 3 3 3 0 ACT domain MarR_2 PF12802.7 gi|150399140|ref|YP_001322907.1| - 0.16 11.9 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.20 gi|150399141|ref|YP_001322908.1| - 7.9e-08 32.6 0.0 1.3e-07 31.8 0.0 1.5 1 1 0 1 1 1 1 Transcriptional regulator HrcA_DNA-bdg PF03444.15 gi|150399141|ref|YP_001322908.1| - 9.5e-05 22.0 0.1 0.00015 21.4 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_5 PF01022.20 gi|150399141|ref|YP_001322908.1| - 0.00023 21.0 0.0 0.00035 20.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|150399141|ref|YP_001322908.1| - 0.00099 19.0 1.9 0.0014 18.6 1.9 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_11 PF08279.12 gi|150399141|ref|YP_001322908.1| - 0.0016 18.4 0.1 0.0026 17.7 0.1 1.3 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.7 gi|150399141|ref|YP_001322908.1| - 0.0055 16.7 0.0 0.0076 16.3 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|150399141|ref|YP_001322908.1| - 0.01 16.0 0.0 0.018 15.3 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|150399141|ref|YP_001322908.1| - 0.013 15.3 0.0 0.017 15.0 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|150399141|ref|YP_001322908.1| - 0.018 14.9 1.7 0.12 12.2 1.7 1.9 1 1 0 1 1 1 0 TFIIE alpha subunit AAA_assoc_C PF09821.9 gi|150399141|ref|YP_001322908.1| - 0.07 13.7 0.5 0.58 10.7 0.2 2.0 1 1 1 2 2 2 0 C-terminal AAA-associated domain MarR_2 PF12802.7 gi|150399141|ref|YP_001322908.1| - 0.071 13.0 0.0 0.087 12.7 0.0 1.2 1 0 0 1 1 1 0 MarR family Dimerisation PF08100.11 gi|150399141|ref|YP_001322908.1| - 0.11 12.6 0.0 0.23 11.5 0.0 1.6 1 1 0 1 1 1 0 Dimerisation domain MoaC PF01967.21 gi|150399142|ref|YP_001322909.1| - 1.5e-48 164.3 3.5 1.7e-48 164.1 3.5 1.0 1 0 0 1 1 1 1 MoaC family DUF150 PF02576.17 gi|150399142|ref|YP_001322909.1| - 0.091 13.2 0.0 1.5 9.3 0.0 2.3 2 0 0 2 2 2 0 RimP N-terminal domain CCG PF02754.16 gi|150399143|ref|YP_001322910.1| - 1.8e-41 140.2 4.6 1.1e-20 73.6 0.1 3.0 3 0 0 3 3 3 2 Cysteine-rich domain Fer2_3 PF13085.6 gi|150399143|ref|YP_001322910.1| - 6.3e-22 77.6 1.8 1.1e-21 76.9 0.1 2.3 2 1 1 3 3 3 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|150399143|ref|YP_001322910.1| - 1.3e-11 44.7 5.4 1.3e-11 44.7 5.4 2.8 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399143|ref|YP_001322910.1| - 6.4e-09 35.8 5.8 6.4e-09 35.8 5.8 3.4 4 1 0 4 4 4 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399143|ref|YP_001322910.1| - 1.1e-08 35.2 6.1 1.1e-08 35.2 6.1 3.5 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399143|ref|YP_001322910.1| - 1.2e-08 35.3 7.0 1.2e-08 35.3 7.0 3.5 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399143|ref|YP_001322910.1| - 5.9e-08 32.9 4.2 0.00014 22.0 0.4 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399143|ref|YP_001322910.1| - 6.2e-07 29.9 7.1 6.2e-07 29.9 7.1 3.3 4 1 0 4 4 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399143|ref|YP_001322910.1| - 7.2e-06 26.9 7.2 7.2e-06 26.9 7.2 3.4 4 1 0 4 4 2 1 4Fe-4S double cluster binding domain Fer2 PF00111.27 gi|150399143|ref|YP_001322910.1| - 7.6e-06 25.8 0.1 7.6e-06 25.8 0.1 2.3 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4 PF00037.27 gi|150399143|ref|YP_001322910.1| - 0.0028 17.4 4.1 0.0028 17.4 4.1 4.5 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|150399143|ref|YP_001322910.1| - 0.011 16.6 4.6 0.011 16.6 4.6 3.9 5 0 0 5 5 2 0 4Fe-4S binding domain Fer2_4 PF13510.6 gi|150399143|ref|YP_001322910.1| - 0.017 15.2 0.1 0.045 13.8 0.1 1.7 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Fer4_2 PF12797.7 gi|150399143|ref|YP_001322910.1| - 0.018 15.1 2.8 0.018 15.1 2.8 4.6 5 0 0 5 5 5 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399143|ref|YP_001322910.1| - 0.022 15.2 1.3 0.022 15.2 1.3 4.7 5 0 0 5 5 4 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399143|ref|YP_001322910.1| - 0.023 14.7 3.4 0.023 14.7 3.4 4.3 5 0 0 5 5 5 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|150399143|ref|YP_001322910.1| - 0.025 15.4 1.4 0.025 15.4 1.4 4.4 4 1 2 6 6 5 0 4Fe-4S dicluster domain Cas_CXXC_CXXC PF09706.10 gi|150399143|ref|YP_001322910.1| - 0.027 14.7 2.7 5 7.4 0.0 3.6 3 0 0 3 3 3 0 CRISPR-associated protein (Cas_CXXC_CXXC) Fer4_13 PF13370.6 gi|150399143|ref|YP_001322910.1| - 0.2 12.2 12.2 2 9.0 1.7 3.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I DUF1894 PF08979.11 gi|150399143|ref|YP_001322910.1| - 0.21 12.0 2.5 26 5.3 0.0 3.4 4 0 0 4 4 3 0 Domain of unknown function (DUF1894) Desulfoferrod_N PF06397.12 gi|150399143|ref|YP_001322910.1| - 0.61 9.7 7.7 2 8.1 3.5 2.9 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain c-SKI_SMAD_bind PF08782.10 gi|150399143|ref|YP_001322910.1| - 4.3 7.6 6.3 14 6.0 0.3 2.5 1 1 1 2 2 2 0 c-SKI Smad4 binding domain Fer4_21 PF14697.6 gi|150399143|ref|YP_001322910.1| - 6 7.1 23.5 3.1 8.0 13.6 4.0 3 1 1 4 4 4 0 4Fe-4S dicluster domain Na_Ca_ex PF01699.24 gi|150399144|ref|YP_001322911.1| - 5.4e-53 179.0 34.4 7e-27 94.2 12.9 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Peptidase_S49 PF01343.18 gi|150399145|ref|YP_001322912.1| - 3.7e-48 163.4 0.7 5.7e-48 162.8 0.7 1.3 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.23 gi|150399145|ref|YP_001322912.1| - 0.00042 20.3 0.6 0.02 14.8 0.1 2.3 2 0 0 2 2 2 1 Clp protease Succ_CoA_lig PF13607.6 gi|150399145|ref|YP_001322912.1| - 0.02 14.7 0.0 0.035 13.9 0.0 1.4 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain OKR_DC_1_N PF03709.15 gi|150399145|ref|YP_001322912.1| - 0.027 14.7 0.0 0.054 13.8 0.0 1.5 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain HTH_24 PF13412.6 gi|150399146|ref|YP_001322913.1| - 0.00067 19.2 0.2 0.0018 17.8 0.2 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding RPA_C PF08784.11 gi|150399146|ref|YP_001322913.1| - 0.00078 20.1 0.0 0.0012 19.5 0.0 1.3 1 0 0 1 1 1 1 Replication protein A C terminal DUF4706 PF15797.5 gi|150399146|ref|YP_001322913.1| - 0.057 13.9 0.1 0.11 13.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4706) ANAPC2 PF08672.11 gi|150399146|ref|YP_001322913.1| - 0.075 13.5 0.0 0.2 12.2 0.0 1.7 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 DUF977 PF06163.11 gi|150399146|ref|YP_001322913.1| - 0.16 11.9 0.1 2.3 8.2 0.0 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF977) RNA_binding PF01877.17 gi|150399147|ref|YP_001322914.1| - 6.1e-12 45.9 2.8 3.5e-11 43.4 2.4 2.1 1 1 0 1 1 1 1 RNA binding Aminotran_1_2 PF00155.21 gi|150399148|ref|YP_001322915.1| - 3.1e-69 233.9 0.0 3.5e-69 233.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|150399148|ref|YP_001322915.1| - 3.8e-06 25.7 0.1 5.6e-06 25.1 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|150399148|ref|YP_001322915.1| - 7.2e-06 25.2 0.1 1e-05 24.7 0.1 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|150399148|ref|YP_001322915.1| - 1.2e-05 24.8 0.0 1.8e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|150399148|ref|YP_001322915.1| - 6e-05 22.5 0.0 9.4e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DUF1246 PF06849.12 gi|150399148|ref|YP_001322915.1| - 0.013 15.5 0.1 6.7 6.7 0.0 3.7 3 1 1 4 4 4 0 Protein of unknown function (DUF1246) DUF1450 PF07293.11 gi|150399148|ref|YP_001322915.1| - 0.048 13.5 0.0 0.17 11.7 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) YwiC PF14256.6 gi|150399149|ref|YP_001322916.1| - 0.00064 20.0 1.1 0.00074 19.8 1.1 1.1 1 0 0 1 1 1 1 YwiC-like protein PhaG_MnhG_YufB PF03334.14 gi|150399149|ref|YP_001322916.1| - 0.0073 16.5 6.3 0.061 13.6 6.3 2.2 1 1 0 1 1 1 1 Na+/H+ antiporter subunit DUF2109 PF09882.9 gi|150399149|ref|YP_001322916.1| - 0.05 13.6 5.0 0.084 12.9 5.0 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2109) TrbC PF04956.13 gi|150399149|ref|YP_001322916.1| - 2.3 8.5 6.9 0.91 9.8 0.4 2.3 1 1 2 3 3 3 0 TrbC/VIRB2 family DUF4040 PF13244.6 gi|150399150|ref|YP_001322917.1| - 3.9e-16 58.9 3.8 4.8e-16 58.6 3.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4040) dUTPase PF00692.19 gi|150399151|ref|YP_001322918.1| - 8.2e-09 35.2 0.0 1.2e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|150399151|ref|YP_001322918.1| - 0.0014 17.5 0.0 0.0016 17.3 0.0 1.2 1 0 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) NTP_transferase PF00483.23 gi|150399152|ref|YP_001322919.1| - 9.7e-40 136.7 0.0 1.6e-39 136.0 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|150399152|ref|YP_001322919.1| - 2.2e-22 77.9 20.0 9.9e-09 34.6 2.2 4.5 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|150399152|ref|YP_001322919.1| - 4e-11 43.5 0.0 5.6e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|150399152|ref|YP_001322919.1| - 0.00014 21.7 0.0 0.00022 21.1 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Hexapep_2 PF14602.6 gi|150399152|ref|YP_001322919.1| - 0.0053 16.5 25.0 0.024 14.4 2.5 5.2 4 2 1 5 5 5 3 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.13 gi|150399152|ref|YP_001322919.1| - 0.082 13.2 0.5 0.082 13.2 0.5 2.3 2 0 0 2 2 2 0 Polymer-forming cytoskeletal CTP_transf_3 PF02348.19 gi|150399152|ref|YP_001322919.1| - 0.12 12.2 0.1 0.26 11.2 0.0 1.5 2 0 0 2 2 2 0 Cytidylyltransferase PGM_PMM_I PF02878.16 gi|150399153|ref|YP_001322920.1| - 1.5e-35 121.9 0.1 4.8e-35 120.3 0.0 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 gi|150399153|ref|YP_001322920.1| - 1.9e-22 79.6 0.0 3.4e-22 78.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 gi|150399153|ref|YP_001322920.1| - 3e-21 76.0 0.2 1.9e-20 73.4 0.0 2.3 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|150399153|ref|YP_001322920.1| - 4.1e-12 46.1 0.0 1.3e-11 44.5 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Glycos_transf_2 PF00535.26 gi|150399155|ref|YP_001322922.1| - 1.6e-26 93.1 0.2 2.4e-26 92.6 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|150399155|ref|YP_001322922.1| - 4.7e-10 39.8 0.0 7.2e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|150399155|ref|YP_001322922.1| - 3.1e-05 23.6 3.0 5e-05 22.9 3.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|150399155|ref|YP_001322922.1| - 0.041 14.4 0.0 0.08 13.5 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 JmjN PF02375.17 gi|150399156|ref|YP_001322923.1| - 0.093 12.7 0.1 0.89 9.6 0.0 2.3 2 0 0 2 2 2 0 jmjN domain Glycos_transf_2 PF00535.26 gi|150399157|ref|YP_001322924.1| - 2.2e-29 102.4 0.2 3.6e-29 101.8 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|150399157|ref|YP_001322924.1| - 8.5e-10 38.6 6.5 1.1e-09 38.2 6.5 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|150399157|ref|YP_001322924.1| - 3.2e-09 37.0 0.0 7.5e-09 35.8 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Rhamno_transf PF11316.8 gi|150399157|ref|YP_001322924.1| - 0.067 12.6 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Putative rhamnosyl transferase Methyltransf_21 PF05050.12 gi|150399158|ref|YP_001322925.1| - 1.6e-16 60.9 0.6 2e-16 60.5 0.6 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain PsbU PF06514.11 gi|150399158|ref|YP_001322925.1| - 0.017 15.1 0.1 0.038 14.0 0.1 1.6 1 0 0 1 1 1 0 Photosystem II 12 kDa extrinsic protein (PsbU) Methyltransf_23 PF13489.6 gi|150399159|ref|YP_001322926.1| - 1.2e-12 48.0 0.0 8.1e-12 45.3 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|150399159|ref|YP_001322926.1| - 6.3e-11 42.8 0.0 9.7e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|150399159|ref|YP_001322926.1| - 2e-07 30.9 0.1 2e-06 27.7 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|150399159|ref|YP_001322926.1| - 3.5e-07 30.3 0.0 5.2e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_12 PF08242.12 gi|150399159|ref|YP_001322926.1| - 2e-06 28.5 0.0 3.7e-06 27.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|150399159|ref|YP_001322926.1| - 8.5e-06 26.4 0.0 1.9e-05 25.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|150399159|ref|YP_001322926.1| - 0.00051 19.4 0.0 0.0048 16.3 0.0 2.1 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family N2227 PF07942.12 gi|150399159|ref|YP_001322926.1| - 0.01 15.1 0.8 0.013 14.8 0.8 1.3 1 0 0 1 1 1 1 N2227-like protein MetW PF07021.12 gi|150399159|ref|YP_001322926.1| - 0.016 14.8 0.0 0.027 14.1 0.0 1.5 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_9 PF08003.11 gi|150399159|ref|YP_001322926.1| - 0.13 11.1 0.0 0.25 10.3 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1698) HpcH_HpaI PF03328.14 gi|150399160|ref|YP_001322927.1| - 1.7e-14 53.5 0.4 4.4e-14 52.1 0.4 1.5 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family QRPTase_C PF01729.19 gi|150399160|ref|YP_001322927.1| - 0.0089 15.8 1.3 0.015 15.1 0.7 1.8 1 1 1 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain Aminotran_4 PF01063.19 gi|150399161|ref|YP_001322928.1| - 1.5e-41 142.7 0.0 1.8e-41 142.4 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV Orn_Arg_deC_N PF02784.16 gi|150399162|ref|YP_001322929.1| - 8.8e-26 90.8 0.0 1.2e-25 90.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|150399162|ref|YP_001322929.1| - 0.00044 20.4 0.0 0.0005 20.3 0.0 1.4 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.20 gi|150399162|ref|YP_001322929.1| - 0.00063 19.4 0.0 0.0009 18.9 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Polysacc_synt_2 PF02719.15 gi|150399163|ref|YP_001322930.1| - 6.6e-104 347.2 1.3 1.5e-103 346.0 1.0 1.7 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Epimerase PF01370.21 gi|150399163|ref|YP_001322930.1| - 1.8e-18 66.9 0.1 1.7e-17 63.7 0.1 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|150399163|ref|YP_001322930.1| - 3e-13 49.9 0.1 3.3e-12 46.4 0.1 2.1 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|150399163|ref|YP_001322930.1| - 5.9e-09 35.4 0.0 2.8e-08 33.2 0.0 2.2 1 1 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|150399163|ref|YP_001322930.1| - 2.3e-08 33.4 0.5 4.4e-08 32.5 0.5 1.5 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family PglD_N PF17836.1 gi|150399163|ref|YP_001322930.1| - 1.7e-07 31.8 0.7 1.7e-07 31.8 0.7 2.8 3 0 0 3 3 3 1 PglD N-terminal domain CoA_binding_3 PF13727.6 gi|150399163|ref|YP_001322930.1| - 1.5e-06 28.4 0.0 2.4e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 CoA-binding domain NAD_binding_4 PF07993.12 gi|150399163|ref|YP_001322930.1| - 0.00011 21.5 0.1 0.00026 20.2 0.1 1.5 1 1 0 1 1 1 1 Male sterility protein CoA_binding PF02629.19 gi|150399163|ref|YP_001322930.1| - 0.0017 19.0 0.6 0.0098 16.6 0.1 2.4 2 0 0 2 2 2 1 CoA binding domain KR PF08659.10 gi|150399163|ref|YP_001322930.1| - 0.0019 18.2 0.0 0.0042 17.0 0.0 1.6 1 1 0 1 1 1 1 KR domain ThiF PF00899.21 gi|150399163|ref|YP_001322930.1| - 0.034 13.5 0.1 8.2 5.7 0.0 2.4 2 0 0 2 2 2 0 ThiF family Trp_syntA PF00290.20 gi|150399163|ref|YP_001322930.1| - 0.049 12.5 0.2 0.94 8.3 0.0 2.4 2 0 0 2 2 2 0 Tryptophan synthase alpha chain Glycos_transf_1 PF00534.20 gi|150399164|ref|YP_001322931.1| - 1.1e-36 125.9 0.1 1.9e-35 121.9 0.0 2.1 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|150399164|ref|YP_001322931.1| - 5e-26 91.7 0.0 8.4e-26 91.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|150399164|ref|YP_001322931.1| - 5.6e-17 62.1 0.5 5.6e-17 62.1 0.5 2.2 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|150399164|ref|YP_001322931.1| - 3.4e-10 40.2 0.0 2.6e-08 34.1 0.0 2.3 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|150399164|ref|YP_001322931.1| - 4.1e-10 39.9 0.0 6.8e-10 39.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Epimerase PF01370.21 gi|150399165|ref|YP_001322932.1| - 1.6e-51 175.1 0.0 1.9e-51 174.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|150399165|ref|YP_001322932.1| - 4.5e-49 167.6 0.0 8.4e-49 166.7 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|150399165|ref|YP_001322932.1| - 3.6e-16 59.0 0.0 5e-16 58.5 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|150399165|ref|YP_001322932.1| - 4.4e-15 55.6 0.0 5e-14 52.1 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|150399165|ref|YP_001322932.1| - 7.4e-15 54.8 0.0 9.9e-15 54.4 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|150399165|ref|YP_001322932.1| - 4.2e-07 29.4 0.1 0.00016 20.9 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 gi|150399165|ref|YP_001322932.1| - 0.029 14.3 0.0 0.059 13.3 0.0 1.5 1 0 0 1 1 1 0 NAD(P)H-binding UPF0158 PF03682.13 gi|150399165|ref|YP_001322932.1| - 0.044 13.8 0.4 0.45 10.5 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0158) UDPG_MGDP_dh_N PF03721.14 gi|150399166|ref|YP_001322933.1| - 1.7e-61 207.1 0.0 2.8e-61 206.4 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|150399166|ref|YP_001322933.1| - 2.6e-37 126.9 0.1 6.3e-37 125.7 0.1 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|150399166|ref|YP_001322933.1| - 7.4e-27 93.8 0.1 3.6e-26 91.6 0.1 2.1 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|150399166|ref|YP_001322933.1| - 0.00015 21.9 0.1 0.0063 16.7 0.0 2.7 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|150399166|ref|YP_001322933.1| - 0.0012 18.8 0.1 0.0043 17.0 0.0 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|150399166|ref|YP_001322933.1| - 0.0018 18.8 0.8 0.094 13.3 0.1 3.4 4 0 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 gi|150399166|ref|YP_001322933.1| - 0.019 14.3 0.1 0.078 12.3 0.1 2.0 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|150399166|ref|YP_001322933.1| - 0.026 15.1 0.6 5.7 7.6 0.2 3.7 4 1 0 4 4 3 0 NADP oxidoreductase coenzyme F420-dependent Imm30 PF15565.6 gi|150399166|ref|YP_001322933.1| - 0.03 14.4 0.0 0.12 12.4 0.0 2.1 1 0 0 1 1 1 0 Immunity protein 30 ApbA PF02558.16 gi|150399166|ref|YP_001322933.1| - 0.087 12.5 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 gi|150399166|ref|YP_001322933.1| - 0.13 11.5 0.0 0.33 10.1 0.0 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF4350 PF14258.6 gi|150399166|ref|YP_001322933.1| - 0.16 12.5 0.0 19 5.8 0.0 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4350) Polysacc_synt PF01943.17 gi|150399167|ref|YP_001322934.1| - 1.4e-31 109.9 38.2 1.4e-31 109.9 38.2 2.9 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|150399167|ref|YP_001322934.1| - 1.9e-25 89.6 23.1 1.9e-25 89.6 23.1 4.1 2 1 0 3 3 3 1 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|150399167|ref|YP_001322934.1| - 3.6e-12 46.2 39.1 5.1e-09 36.0 11.9 3.6 3 2 0 3 3 3 2 MatE MurJ PF03023.14 gi|150399167|ref|YP_001322934.1| - 5.8e-09 35.1 42.7 5.8e-09 35.1 42.7 1.9 1 1 1 2 2 2 1 Lipid II flippase MurJ Polysacc_synt_3 PF13440.6 gi|150399167|ref|YP_001322934.1| - 2.8e-08 33.3 23.5 2.8e-08 33.3 23.5 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Epimerase PF01370.21 gi|150399168|ref|YP_001322935.1| - 4.4e-59 199.8 0.0 5.3e-59 199.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|150399168|ref|YP_001322935.1| - 9e-58 196.2 0.0 4e-57 194.1 0.0 1.8 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|150399168|ref|YP_001322935.1| - 9e-27 93.8 0.3 1.2e-26 93.4 0.3 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|150399168|ref|YP_001322935.1| - 2.6e-15 56.3 0.3 1.1e-13 50.9 0.3 2.6 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|150399168|ref|YP_001322935.1| - 4.9e-15 55.4 0.0 6.2e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|150399168|ref|YP_001322935.1| - 2.5e-13 49.8 0.1 4e-09 36.0 0.0 2.6 1 1 1 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 gi|150399168|ref|YP_001322935.1| - 9.2e-09 35.4 0.0 1.4e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|150399168|ref|YP_001322935.1| - 7.8e-07 28.9 0.2 3.2e-06 26.9 0.2 2.0 1 1 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|150399168|ref|YP_001322935.1| - 0.00091 18.7 0.2 0.0059 16.1 0.0 2.2 1 1 1 2 2 2 1 short chain dehydrogenase 3HCDH_N PF02737.18 gi|150399168|ref|YP_001322935.1| - 0.014 15.3 0.0 0.022 14.6 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KR PF08659.10 gi|150399168|ref|YP_001322935.1| - 0.031 14.2 0.0 0.15 12.0 0.0 1.9 2 0 0 2 2 2 0 KR domain TrkA_N PF02254.18 gi|150399168|ref|YP_001322935.1| - 0.11 12.8 0.0 0.27 11.5 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain NTP_transferase PF00483.23 gi|150399169|ref|YP_001322936.1| - 2.5e-34 119.0 0.1 4.6e-34 118.1 0.1 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|150399169|ref|YP_001322936.1| - 2.8e-10 40.8 0.0 3.5e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|150399169|ref|YP_001322936.1| - 0.00022 21.0 0.0 0.00048 19.9 0.0 1.5 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.26 gi|150399169|ref|YP_001322936.1| - 0.0038 17.1 0.0 0.0056 16.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Smr PF01713.21 gi|150399169|ref|YP_001322936.1| - 0.08 13.3 0.0 0.24 11.8 0.0 1.8 1 0 0 1 1 1 0 Smr domain DUF1392 PF07154.11 gi|150399169|ref|YP_001322936.1| - 0.081 13.0 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1392) Mem_trans PF03547.18 gi|150399170|ref|YP_001322937.1| - 6e-42 143.4 32.4 4.2e-21 74.8 7.6 2.2 1 1 1 2 2 2 2 Membrane transport protein DUF5504 PF17608.2 gi|150399170|ref|YP_001322937.1| - 6.8 6.8 11.0 0.44 10.6 2.5 2.8 1 1 1 3 3 3 0 Family of unknown function (DUF5504) CTP_transf_like PF01467.26 gi|150399171|ref|YP_001322938.1| - 2.7e-12 47.1 0.1 3.2e-12 46.9 0.1 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like Hpr_kinase_C PF07475.12 gi|150399171|ref|YP_001322938.1| - 0.035 13.6 0.3 0.046 13.2 0.3 1.1 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain FAD_syn PF06574.12 gi|150399171|ref|YP_001322938.1| - 0.071 13.0 1.8 0.21 11.5 1.8 1.8 1 1 0 1 1 1 0 FAD synthetase PPDK_N PF01326.19 gi|150399172|ref|YP_001322939.1| - 3.2e-116 388.2 2.0 4.5e-116 387.7 1.1 1.7 2 0 0 2 2 2 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|150399172|ref|YP_001322939.1| - 2.2e-86 289.6 0.6 2.2e-86 289.6 0.6 1.6 2 0 0 2 2 2 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|150399172|ref|YP_001322939.1| - 1.4e-25 88.7 0.9 1.4e-25 88.7 0.9 1.9 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain HpcH_HpaI PF03328.14 gi|150399172|ref|YP_001322939.1| - 3.6e-05 23.0 0.3 9.6e-05 21.6 0.3 1.7 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family Epimerase_2 PF02350.19 gi|150399172|ref|YP_001322939.1| - 0.029 13.2 0.0 0.059 12.2 0.0 1.5 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Radical_SAM PF04055.21 gi|150399172|ref|YP_001322939.1| - 0.26 11.6 1.3 27 5.1 0.1 3.6 2 1 2 4 4 4 0 Radical SAM superfamily PBP_like_2 PF12849.7 gi|150399173|ref|YP_001322940.1| - 9.2e-36 124.0 0.2 4.3e-35 121.8 0.2 1.8 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|150399173|ref|YP_001322940.1| - 8.3e-20 70.7 0.0 9.9e-20 70.5 0.0 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|150399173|ref|YP_001322940.1| - 6.1e-08 32.7 0.0 4.6e-07 29.8 0.0 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|150399174|ref|YP_001322941.1| - 3.4e-31 108.4 13.3 3.4e-31 108.4 13.3 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|150399175|ref|YP_001322942.1| - 2.5e-24 86.1 15.9 2.5e-24 86.1 15.9 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Herpes_LMP1 PF05297.11 gi|150399175|ref|YP_001322942.1| - 4 6.5 10.8 0.099 11.8 1.4 2.2 2 0 0 2 2 2 0 Herpesvirus latent membrane protein 1 (LMP1) CrgA PF06781.12 gi|150399175|ref|YP_001322942.1| - 4.2 7.5 7.1 5.5 7.1 3.4 3.0 2 1 0 2 2 2 0 Cell division protein CrgA ABC_tran PF00005.27 gi|150399176|ref|YP_001322943.1| - 1.5e-32 113.0 0.0 2.1e-32 112.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|150399176|ref|YP_001322943.1| - 1.2e-09 38.4 0.1 0.00011 22.2 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|150399176|ref|YP_001322943.1| - 3.9e-07 29.7 0.1 4.6e-05 23.0 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|150399176|ref|YP_001322943.1| - 9.9e-05 22.3 0.0 0.00021 21.2 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 gi|150399176|ref|YP_001322943.1| - 0.00011 22.0 0.1 0.00025 20.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|150399176|ref|YP_001322943.1| - 0.00021 21.9 0.0 0.00053 20.6 0.0 1.6 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|150399176|ref|YP_001322943.1| - 0.0003 20.8 0.0 0.00058 19.8 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 gi|150399176|ref|YP_001322943.1| - 0.0011 19.2 0.0 0.0019 18.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|150399176|ref|YP_001322943.1| - 0.0025 17.5 0.0 0.0051 16.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|150399176|ref|YP_001322943.1| - 0.0067 16.8 0.0 0.011 16.1 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|150399176|ref|YP_001322943.1| - 0.041 14.4 0.1 0.1 13.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|150399176|ref|YP_001322943.1| - 0.08 13.4 0.1 1 9.8 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 gi|150399176|ref|YP_001322943.1| - 0.085 12.6 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.6 gi|150399176|ref|YP_001322943.1| - 0.1 12.8 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|150399176|ref|YP_001322943.1| - 0.1 12.5 0.4 0.34 10.8 0.4 2.0 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|150399176|ref|YP_001322943.1| - 0.11 12.2 0.0 0.29 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_11 PF13086.6 gi|150399176|ref|YP_001322943.1| - 0.18 11.5 0.1 0.76 9.5 0.0 2.0 1 1 1 2 2 2 0 AAA domain PhoU PF01895.19 gi|150399177|ref|YP_001322944.1| - 2e-36 124.3 4.2 6.2e-21 74.7 2.0 2.1 2 0 0 2 2 2 2 PhoU domain CPSase_L_D3 PF02787.19 gi|150399177|ref|YP_001322944.1| - 0.15 12.5 2.3 0.52 10.7 0.4 2.5 1 1 1 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TrmB PF01978.19 gi|150399178|ref|YP_001322945.1| - 5e-08 32.7 0.3 8.9e-08 31.9 0.3 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|150399178|ref|YP_001322945.1| - 0.00011 21.6 0.0 0.00042 19.8 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding DUF1495 PF07381.11 gi|150399178|ref|YP_001322945.1| - 0.0018 18.1 0.2 0.0066 16.3 0.1 1.8 1 1 1 2 2 2 1 Winged helix DNA-binding domain (DUF1495) Fe_dep_repress PF01325.19 gi|150399178|ref|YP_001322945.1| - 0.0022 18.1 0.1 0.0071 16.5 0.1 1.9 1 1 1 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_5 PF01022.20 gi|150399178|ref|YP_001322945.1| - 0.0025 17.6 0.0 0.0049 16.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|150399178|ref|YP_001322945.1| - 0.019 14.7 0.0 0.032 14.0 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF1904 PF08921.11 gi|150399178|ref|YP_001322945.1| - 0.073 13.4 0.5 6.1 7.2 0.0 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF1904) MarR_2 PF12802.7 gi|150399178|ref|YP_001322945.1| - 0.092 12.6 0.0 0.17 11.8 0.0 1.5 1 0 0 1 1 1 0 MarR family hnRNP_Q_AcD PF18360.1 gi|150399178|ref|YP_001322945.1| - 0.097 12.6 0.1 1 9.4 0.0 2.4 3 0 0 3 3 3 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain Rrf2 PF02082.20 gi|150399178|ref|YP_001322945.1| - 0.12 12.7 0.0 0.22 11.9 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator Lge1 PF11488.8 gi|150399178|ref|YP_001322945.1| - 0.13 12.5 0.2 15 5.9 0.0 2.3 2 0 0 2 2 2 0 Transcriptional regulatory protein LGE1 HTH_DeoR PF08220.12 gi|150399178|ref|YP_001322945.1| - 0.15 11.8 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_20 PF12840.7 gi|150399178|ref|YP_001322945.1| - 0.16 12.1 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Aminotran_3 PF00202.21 gi|150399179|ref|YP_001322946.1| - 5e-124 414.1 0.1 5.7e-124 413.9 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.21 gi|150399179|ref|YP_001322946.1| - 1.2e-05 24.8 0.0 2.2e-05 23.9 0.0 1.3 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|150399179|ref|YP_001322946.1| - 3.1e-05 23.3 0.0 7.2e-05 22.1 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|150399179|ref|YP_001322946.1| - 0.00071 19.0 0.0 0.0012 18.2 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|150399179|ref|YP_001322946.1| - 0.01 14.8 0.0 0.017 14.1 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class-V PLDc_2 PF13091.6 gi|150399180|ref|YP_001322947.1| - 1.5e-22 79.9 3.5 1.9e-22 79.6 3.5 1.1 1 0 0 1 1 1 1 PLD-like domain PP_kinase_C_1 PF17941.1 gi|150399180|ref|YP_001322947.1| - 1.5e-05 24.6 1.2 2.1e-05 24.2 1.2 1.3 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain 1 PLDc PF00614.22 gi|150399180|ref|YP_001322947.1| - 0.00054 20.0 0.8 0.00093 19.3 0.8 1.4 1 0 0 1 1 1 1 Phospholipase D Active site motif Regulator_TrmB PF11495.8 gi|150399180|ref|YP_001322947.1| - 0.024 13.9 0.5 0.027 13.7 0.5 1.1 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB TfuA PF07812.12 gi|150399181|ref|YP_001322948.1| - 1e-40 138.2 0.0 3e-40 136.7 0.1 1.7 2 0 0 2 2 2 1 TfuA-like protein PduV-EutP PF10662.9 gi|150399181|ref|YP_001322948.1| - 0.052 13.3 0.8 0.091 12.5 0.2 1.8 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation PyrI PF01948.18 gi|150399182|ref|YP_001322949.1| - 2e-30 104.9 3.7 2e-30 104.9 3.7 1.9 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|150399182|ref|YP_001322949.1| - 2.9e-18 65.5 8.1 3.1e-18 65.4 6.9 1.7 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain ATP-grasp_2 PF08442.10 gi|150399183|ref|YP_001322950.1| - 1.5e-59 200.9 3.7 1.5e-59 200.9 3.7 2.0 2 0 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|150399183|ref|YP_001322950.1| - 7.8e-09 35.5 1.3 1.3e-08 34.9 0.4 1.8 2 0 0 2 2 2 1 CoA-ligase ATP-grasp_5 PF13549.6 gi|150399183|ref|YP_001322950.1| - 1.8e-07 30.9 0.4 2.8e-07 30.2 0.4 1.3 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|150399183|ref|YP_001322950.1| - 7.6e-05 22.3 0.2 0.00011 21.7 0.2 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain GARS_A PF01071.19 gi|150399183|ref|YP_001322950.1| - 0.0072 16.1 1.1 0.016 14.9 1.1 1.6 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HeH PF12949.7 gi|150399183|ref|YP_001322950.1| - 0.088 12.5 0.1 8.8 6.1 0.0 2.5 2 0 0 2 2 2 0 HeH/LEM domain SlyX PF04102.12 gi|150399184|ref|YP_001322951.1| - 0.00015 22.3 1.3 0.00052 20.6 1.3 1.8 1 1 0 1 1 1 1 SlyX YkyA PF10368.9 gi|150399184|ref|YP_001322951.1| - 0.022 14.4 15.7 0.026 14.2 15.7 1.1 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein DHquinase_I PF01487.15 gi|150399184|ref|YP_001322951.1| - 0.083 13.1 1.6 0.096 12.9 1.6 1.1 1 0 0 1 1 1 0 Type I 3-dehydroquinase ZapB PF06005.12 gi|150399184|ref|YP_001322951.1| - 0.16 12.5 6.9 0.27 11.7 6.9 1.4 1 0 0 1 1 1 0 Cell division protein ZapB DUF3885 PF13021.6 gi|150399184|ref|YP_001322951.1| - 0.94 9.6 6.5 0.87 9.7 2.4 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF3885) SRP19 PF01922.17 gi|150399185|ref|YP_001322952.1| - 2.8e-19 69.9 0.0 3e-19 69.7 0.0 1.0 1 0 0 1 1 1 1 SRP19 protein DUF373 PF04123.13 gi|150399186|ref|YP_001322953.1| - 1.7e-83 280.9 11.0 2.1e-83 280.6 11.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) O_anti_polymase PF01901.16 gi|150399187|ref|YP_001322954.1| - 2.3e-61 207.9 62.4 4.9e-61 206.8 62.4 1.5 1 1 0 1 1 1 1 Putative O-antigen polymerase DUF1689 PF07954.11 gi|150399187|ref|YP_001322954.1| - 3.4 8.1 5.1 17 5.8 0.6 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1689) O_anti_polymase PF01901.16 gi|150399188|ref|YP_001322955.1| - 1.8e-83 280.6 39.7 2.1e-83 280.4 39.7 1.0 1 0 0 1 1 1 1 Putative O-antigen polymerase YdjM PF04307.14 gi|150399188|ref|YP_001322955.1| - 0.28 10.5 9.9 0.037 13.3 5.1 2.1 2 1 0 2 2 2 0 LexA-binding, inner membrane-associated putative hydrolase Regulator_TrmB PF11495.8 gi|150399189|ref|YP_001322956.1| - 3.6e-05 23.1 0.0 7.2e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB Transket_pyr PF02779.24 gi|150399190|ref|YP_001322957.1| - 3.1e-43 147.5 0.1 4.7e-43 146.9 0.1 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|150399190|ref|YP_001322957.1| - 2.8e-29 101.5 0.0 4.4e-29 100.9 0.0 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain Ribul_P_3_epim PF00834.19 gi|150399191|ref|YP_001322958.1| - 2.6e-72 242.4 0.4 3e-72 242.2 0.4 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Diphthami_syn_2 PF01902.17 gi|150399191|ref|YP_001322958.1| - 0.0016 18.0 0.0 0.0024 17.4 0.0 1.3 1 0 0 1 1 1 1 Diphthamide synthase PcrB PF01884.17 gi|150399191|ref|YP_001322958.1| - 0.018 14.5 0.5 0.032 13.7 0.1 1.7 2 0 0 2 2 2 0 PcrB family TMP-TENI PF02581.17 gi|150399191|ref|YP_001322958.1| - 0.08 12.3 0.2 0.27 10.5 0.1 1.9 2 0 0 2 2 2 0 Thiamine monophosphate synthase Transketolase_N PF00456.21 gi|150399192|ref|YP_001322959.1| - 5.6e-56 189.9 0.0 9.4e-56 189.2 0.0 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 gi|150399192|ref|YP_001322959.1| - 2.9e-10 39.8 0.1 1.7e-06 27.5 0.0 2.2 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase XFP_N PF09364.10 gi|150399192|ref|YP_001322959.1| - 0.00013 20.9 0.0 0.00019 20.4 0.0 1.3 1 0 0 1 1 1 1 XFP N-terminal domain E1_dh PF00676.20 gi|150399192|ref|YP_001322959.1| - 0.00031 19.8 0.1 0.00043 19.3 0.1 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|150399192|ref|YP_001322959.1| - 0.00099 18.9 0.0 0.038 13.8 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Peptidase_M42 PF05343.14 gi|150399193|ref|YP_001322960.1| - 9.6e-109 362.9 3.8 1.1e-108 362.7 3.8 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|150399193|ref|YP_001322960.1| - 8.5e-11 41.9 0.0 1.3e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|150399193|ref|YP_001322960.1| - 0.00011 22.0 0.0 0.0026 17.5 0.0 2.7 2 1 0 2 2 2 1 Peptidase family M28 Imm8 PF15586.6 gi|150399193|ref|YP_001322960.1| - 0.13 12.3 0.1 0.4 10.7 0.0 1.8 2 0 0 2 2 2 0 Immunity protein 8 CxxCxxCC PF03692.15 gi|150399194|ref|YP_001322961.1| - 1.7e-13 51.0 9.1 1.7e-13 51.0 9.1 1.5 2 0 0 2 2 2 1 Putative zinc- or iron-chelating domain IBR PF01485.21 gi|150399195|ref|YP_001322962.1| - 0.00089 19.4 11.8 0.0075 16.5 3.7 2.3 2 0 0 2 2 2 2 IBR domain, a half RING-finger domain Mu-like_Com PF10122.9 gi|150399195|ref|YP_001322962.1| - 0.094 12.2 0.4 0.094 12.2 0.4 1.7 2 0 0 2 2 2 0 Mu-like prophage protein Com zf-H2C2_2 PF13465.6 gi|150399195|ref|YP_001322962.1| - 0.095 13.2 14.3 0.23 11.9 1.5 3.6 2 1 1 3 3 3 0 Zinc-finger double domain YonK PF09642.10 gi|150399195|ref|YP_001322962.1| - 0.16 12.1 0.2 0.24 11.6 0.2 1.3 1 0 0 1 1 1 0 YonK protein zf-TFIIB PF13453.6 gi|150399195|ref|YP_001322962.1| - 0.2 11.0 12.0 1.6 8.1 3.5 3.3 2 1 1 3 3 3 0 Transcription factor zinc-finger zinc_ribbon_9 PF14369.6 gi|150399195|ref|YP_001322962.1| - 0.24 11.7 0.2 0.24 11.7 0.2 3.1 2 1 1 3 3 3 0 zinc-ribbon zf-ribbon_3 PF13248.6 gi|150399195|ref|YP_001322962.1| - 0.26 10.8 13.0 1.7 8.2 1.0 3.3 3 0 0 3 3 3 0 zinc-ribbon domain zf-C2H2 PF00096.26 gi|150399195|ref|YP_001322962.1| - 0.5 10.9 9.0 3.5 8.3 0.1 3.6 3 0 0 3 3 3 0 Zinc finger, C2H2 type Cys_rich_KTR PF14205.6 gi|150399195|ref|YP_001322962.1| - 0.64 9.9 12.5 6.7 6.6 0.2 2.9 2 1 0 2 2 2 0 Cysteine-rich KTR zf-C2H2_4 PF13894.6 gi|150399195|ref|YP_001322962.1| - 1.2 10.1 12.5 1.9 9.5 0.1 3.7 4 0 0 4 4 3 0 C2H2-type zinc finger DNA_ligase_ZBD PF03119.16 gi|150399195|ref|YP_001322962.1| - 1.6 8.8 11.6 4 7.5 0.3 3.4 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain C1_4 PF07975.12 gi|150399195|ref|YP_001322962.1| - 1.7 9.0 11.7 2.2 8.6 3.9 3.1 2 1 0 2 2 2 0 TFIIH C1-like domain zinc-ribbons_6 PF07191.12 gi|150399195|ref|YP_001322962.1| - 1.9 8.5 13.7 1.6e+02 2.3 13.7 2.8 1 1 0 1 1 1 0 zinc-ribbons TF_Zn_Ribbon PF08271.12 gi|150399195|ref|YP_001322962.1| - 2.5 7.7 13.1 6.1 6.5 0.3 3.2 3 0 0 3 3 3 0 TFIIB zinc-binding zf-AN1 PF01428.16 gi|150399195|ref|YP_001322962.1| - 3.1 8.1 13.2 3 8.1 0.9 3.4 2 1 1 3 3 3 0 AN1-like Zinc finger HATPase_c PF02518.26 gi|150399196|ref|YP_001322963.1| - 2.9e-21 76.0 0.1 2.9e-21 76.0 0.1 2.7 4 0 0 4 4 4 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|150399196|ref|YP_001322963.1| - 1.7e-18 66.4 1.2 3.3e-18 65.5 0.2 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain dCache_3 PF14827.6 gi|150399196|ref|YP_001322963.1| - 1.7e-17 63.9 0.1 3.6e-17 62.8 0.1 1.5 1 0 0 1 1 1 1 Double sensory domain of two-component sensor kinase sCache_3_3 PF17202.4 gi|150399196|ref|YP_001322963.1| - 1.5e-16 60.8 0.9 4.4e-16 59.2 0.3 2.2 2 0 0 2 2 1 1 Single cache domain 3 HAMP PF00672.25 gi|150399196|ref|YP_001322963.1| - 5.6e-10 39.4 0.0 2.1e-09 37.6 0.0 2.0 2 0 0 2 2 2 1 HAMP domain Cache_3-Cache_2 PF17201.4 gi|150399196|ref|YP_001322963.1| - 4e-09 36.2 0.2 1.2e-08 34.6 0.1 1.7 1 1 0 1 1 1 1 Cache 3/Cache 2 fusion domain Apolipoprotein PF01442.18 gi|150399196|ref|YP_001322963.1| - 0.0088 15.9 1.8 0.016 15.1 1.8 1.5 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain HATPase_c_3 PF13589.6 gi|150399196|ref|YP_001322963.1| - 0.055 13.3 0.0 0.055 13.3 0.0 2.4 3 0 0 3 3 3 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CorA PF01544.18 gi|150399196|ref|YP_001322963.1| - 0.069 12.5 3.6 0.14 11.4 3.6 1.5 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Sigma_reg_N PF13800.6 gi|150399196|ref|YP_001322963.1| - 0.45 10.8 9.2 8.4 6.8 0.9 3.5 3 0 0 3 3 3 0 Sigma factor regulator N-terminal ISG65-75 PF11727.8 gi|150399196|ref|YP_001322963.1| - 3.8 6.7 5.3 1.2 8.3 0.2 2.1 2 0 0 2 2 2 0 Invariant surface glycoprotein MMR_HSR1_C PF08438.10 gi|150399197|ref|YP_001322964.1| - 2.7e-32 111.6 2.1 3e-32 111.5 1.0 1.7 2 0 0 2 2 2 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|150399197|ref|YP_001322964.1| - 1.2e-23 83.4 0.1 2e-22 79.4 0.0 2.6 1 1 1 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.21 gi|150399197|ref|YP_001322964.1| - 2.3e-13 50.0 0.0 4.5e-13 49.0 0.0 1.5 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|150399197|ref|YP_001322964.1| - 5.4e-11 42.3 3.3 3.3e-08 33.2 0.4 2.9 3 0 0 3 3 3 2 Ferrous iron transport protein B YchF-GTPase_C PF06071.13 gi|150399197|ref|YP_001322964.1| - 0.0004 20.5 2.8 0.071 13.3 0.0 3.3 2 1 1 3 3 3 1 Protein of unknown function (DUF933) RTP PF02334.16 gi|150399197|ref|YP_001322964.1| - 0.0026 18.4 0.7 0.011 16.3 0.4 2.3 2 1 1 3 3 2 1 Replication terminator protein MeaB PF03308.16 gi|150399197|ref|YP_001322964.1| - 0.0085 15.1 0.2 0.23 10.4 0.0 2.4 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB GTP_EFTU PF00009.27 gi|150399197|ref|YP_001322964.1| - 0.02 14.4 3.9 1.3 8.5 0.6 3.2 2 1 0 3 3 3 0 Elongation factor Tu GTP binding domain AAA_18 PF13238.6 gi|150399197|ref|YP_001322964.1| - 0.38 11.3 2.1 19 5.8 0.0 3.1 2 1 0 2 2 2 0 AAA domain Sec2p PF06428.11 gi|150399197|ref|YP_001322964.1| - 0.78 9.7 6.0 0.74 9.8 1.1 2.4 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p ABC_tran PF00005.27 gi|150399197|ref|YP_001322964.1| - 1.1 9.7 3.5 3.4 8.2 0.0 2.8 2 1 0 2 2 2 0 ABC transporter Radical_SAM PF04055.21 gi|150399198|ref|YP_001322965.1| - 1.5e-14 54.7 0.1 4.4e-14 53.2 0.1 1.8 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|150399198|ref|YP_001322965.1| - 0.003 17.6 0.0 0.0082 16.2 0.0 1.7 2 0 0 2 2 2 1 B12 binding domain AIRS PF00586.24 gi|150399199|ref|YP_001322966.1| - 2.1e-22 79.6 0.0 1.1e-21 77.2 0.0 2.1 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain MSP PF01716.18 gi|150399199|ref|YP_001322966.1| - 0.0065 15.7 0.1 0.014 14.6 0.1 1.5 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide Exosortase_EpsH PF09721.10 gi|150399200|ref|YP_001322967.1| - 5.1e-17 62.3 10.6 6.6e-17 61.9 10.6 1.0 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) Methyltr_RsmB-F PF01189.17 gi|150399201|ref|YP_001322968.1| - 1.5e-58 197.8 0.1 1.8e-58 197.5 0.1 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 gi|150399201|ref|YP_001322968.1| - 6e-09 35.9 0.2 9.3e-09 35.2 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|150399201|ref|YP_001322968.1| - 7.7e-08 32.6 0.0 1.3e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltr_RsmF_N PF17125.5 gi|150399201|ref|YP_001322968.1| - 5.3e-07 30.0 0.0 1.5e-05 25.4 0.0 2.4 2 0 0 2 2 2 1 N-terminal domain of 16S rRNA methyltransferase RsmF Ubie_methyltran PF01209.18 gi|150399201|ref|YP_001322968.1| - 8.7e-07 28.5 0.1 1.9e-06 27.4 0.1 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family DUF2431 PF10354.9 gi|150399201|ref|YP_001322968.1| - 2.7e-06 27.7 0.0 3.9e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Methyltransf_4 PF02390.17 gi|150399201|ref|YP_001322968.1| - 2e-05 24.2 0.4 0.00028 20.4 0.3 2.2 2 0 0 2 2 2 1 Putative methyltransferase PCMT PF01135.19 gi|150399201|ref|YP_001322968.1| - 0.00022 21.1 0.0 0.00058 19.7 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 gi|150399201|ref|YP_001322968.1| - 0.00026 20.6 0.3 0.0013 18.3 0.3 1.9 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|150399201|ref|YP_001322968.1| - 0.00034 21.3 0.0 0.001 19.7 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|150399201|ref|YP_001322968.1| - 0.00044 19.9 0.0 0.00071 19.2 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase DNA_methylase PF00145.17 gi|150399201|ref|YP_001322968.1| - 0.0012 18.2 0.0 0.0021 17.5 0.0 1.3 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Fibrillarin PF01269.17 gi|150399201|ref|YP_001322968.1| - 0.0029 16.8 0.0 0.0045 16.1 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin RrnaAD PF00398.20 gi|150399201|ref|YP_001322968.1| - 0.026 13.6 0.0 0.039 13.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Cons_hypoth95 PF03602.15 gi|150399201|ref|YP_001322968.1| - 0.027 14.1 0.0 0.045 13.4 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 DUF938 PF06080.12 gi|150399201|ref|YP_001322968.1| - 0.037 13.8 0.0 0.065 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Met_10 PF02475.16 gi|150399201|ref|YP_001322968.1| - 0.06 13.1 0.0 0.09 12.5 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein UPF0020 PF01170.18 gi|150399201|ref|YP_001322968.1| - 0.12 12.1 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 AAA_18 PF13238.6 gi|150399201|ref|YP_001322968.1| - 0.5 10.9 2.4 11 6.6 0.6 2.3 2 1 0 2 2 2 0 AAA domain Tex_N PF09371.10 gi|150399202|ref|YP_001322969.1| - 3.1e-64 216.0 3.2 3.1e-64 216.0 3.2 2.4 2 0 0 2 2 2 1 Tex-like protein N-terminal domain Tex_YqgF PF16921.5 gi|150399202|ref|YP_001322969.1| - 3.4e-55 185.9 0.0 7.5e-55 184.8 0.0 1.6 1 0 0 1 1 1 1 Tex protein YqgF-like domain HHH_3 PF12836.7 gi|150399202|ref|YP_001322969.1| - 7.5e-29 99.8 4.0 1.3e-28 99.1 0.7 3.1 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_9 PF17674.1 gi|150399202|ref|YP_001322969.1| - 8.6e-21 74.6 1.6 6.4e-20 71.8 0.4 3.2 3 0 0 3 3 3 1 HHH domain S1 PF00575.23 gi|150399202|ref|YP_001322969.1| - 1.9e-18 66.6 4.3 2.1e-18 66.4 2.7 2.0 2 0 0 2 2 2 1 S1 RNA binding domain HHH_7 PF14635.6 gi|150399202|ref|YP_001322969.1| - 2.2e-10 40.8 1.7 6e-10 39.4 0.2 2.6 3 0 0 3 3 3 1 Helix-hairpin-helix motif YqgF PF14639.6 gi|150399202|ref|YP_001322969.1| - 1.7e-07 31.1 0.1 6.7e-07 29.2 0.1 2.0 1 0 0 1 1 1 1 Holliday-junction resolvase-like of SPT6 HHH_6 PF14579.6 gi|150399202|ref|YP_001322969.1| - 0.0052 17.0 0.1 0.025 14.8 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif YlbD_coat PF14071.6 gi|150399202|ref|YP_001322969.1| - 0.84 9.9 4.0 5.4 7.3 0.2 3.4 3 0 0 3 3 3 0 Putative coat protein Pro_isomerase PF00160.21 gi|150399203|ref|YP_001322970.1| - 4.2e-46 157.1 1.7 4.7e-46 156.9 1.7 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UPF0047 PF01894.17 gi|150399204|ref|YP_001322971.1| - 4e-39 133.3 0.0 4.6e-39 133.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 eRF1_2 PF03464.15 gi|150399205|ref|YP_001322972.1| - 1.6e-43 148.2 0.0 3.7e-43 147.0 0.0 1.7 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|150399205|ref|YP_001322972.1| - 6.7e-29 100.7 1.6 1.8e-28 99.3 1.6 1.8 1 0 0 1 1 1 1 eRF1 domain 3 baeRF_family10 PF18854.1 gi|150399205|ref|YP_001322972.1| - 5.1e-14 52.7 0.0 1.5e-13 51.2 0.0 1.7 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_1 PF03463.15 gi|150399205|ref|YP_001322972.1| - 6.6e-11 42.3 0.0 2e-10 40.7 0.0 1.9 1 0 0 1 1 1 1 eRF1 domain 1 acVLRF1 PF18859.1 gi|150399205|ref|YP_001322972.1| - 5.5e-10 39.6 0.0 8.8e-10 39.0 0.0 1.3 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor zinc_ribbon_15 PF17032.5 gi|150399205|ref|YP_001322972.1| - 0.038 14.7 0.7 0.087 13.6 0.7 1.5 1 0 0 1 1 1 0 zinc-ribbon family FdhE PF04216.12 gi|150399205|ref|YP_001322972.1| - 0.15 12.0 0.4 0.27 11.1 0.4 1.4 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation RNA_pol_Rpb2_7 PF04560.20 gi|150399205|ref|YP_001322972.1| - 7.4 7.1 6.0 15 6.0 0.1 3.2 2 1 1 3 3 3 0 RNA polymerase Rpb2, domain 7 tRNA_int_endo PF01974.17 gi|150399206|ref|YP_001322973.1| - 5.2e-31 106.5 1.3 6.8e-31 106.2 0.5 1.5 2 0 0 2 2 2 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|150399206|ref|YP_001322973.1| - 9.8e-15 54.0 0.4 1.8e-14 53.1 0.4 1.5 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain Sen15 PF09631.10 gi|150399206|ref|YP_001322973.1| - 0.00016 21.9 0.1 0.0006 20.1 0.1 1.9 2 0 0 2 2 2 1 Sen15 protein Ldh_2 PF02615.14 gi|150399207|ref|YP_001322974.1| - 1.2e-113 379.6 0.1 1.4e-113 379.5 0.1 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase DUF4774 PF15999.5 gi|150399207|ref|YP_001322974.1| - 0.1 12.4 0.6 0.35 10.7 0.6 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4774) Flavodoxin_1 PF00258.25 gi|150399208|ref|YP_001322975.1| - 4.5e-11 43.1 0.0 9e-11 42.2 0.0 1.5 1 0 0 1 1 1 1 Flavodoxin Lactamase_B PF00753.27 gi|150399208|ref|YP_001322975.1| - 5.8e-09 36.2 0.0 1.6e-08 34.8 0.0 1.7 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily PGM_PMM_I PF02878.16 gi|150399208|ref|YP_001322975.1| - 0.041 13.6 0.0 0.076 12.7 0.0 1.5 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Flavodoxin_1 PF00258.25 gi|150399209|ref|YP_001322976.1| - 4.1e-13 49.7 0.0 8.1e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 Flavodoxin Lactamase_B PF00753.27 gi|150399209|ref|YP_001322976.1| - 5.8e-09 36.2 0.0 1.6e-08 34.8 0.0 1.7 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily PGM_PMM_I PF02878.16 gi|150399209|ref|YP_001322976.1| - 0.038 13.7 0.0 0.076 12.7 0.0 1.5 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Rubrerythrin PF02915.17 gi|150399210|ref|YP_001322977.1| - 7.5e-17 62.0 9.3 7.6e-16 58.8 8.6 2.0 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|150399210|ref|YP_001322977.1| - 2.5e-10 40.4 5.3 2.1e-08 34.2 5.3 2.1 1 1 0 1 1 1 1 Ferritin-like domain DUF892 PF05974.12 gi|150399210|ref|YP_001322977.1| - 0.0097 15.9 1.5 0.26 11.3 0.1 2.2 1 1 0 2 2 2 2 Domain of unknown function (DUF892) FA_desaturase_2 PF03405.14 gi|150399210|ref|YP_001322977.1| - 0.021 13.7 2.8 0.17 10.7 1.3 2.0 1 1 1 2 2 2 0 Fatty acid desaturase HTH_24 PF13412.6 gi|150399211|ref|YP_001322978.1| - 3.3e-15 55.4 0.0 5.7e-15 54.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|150399211|ref|YP_001322978.1| - 7.7e-15 54.4 0.0 1.2e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|150399211|ref|YP_001322978.1| - 3.1e-12 46.3 0.0 6.2e-12 45.3 0.0 1.5 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_11 PF08279.12 gi|150399211|ref|YP_001322978.1| - 1.6e-05 24.7 0.0 3.1e-05 23.8 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.7 gi|150399211|ref|YP_001322978.1| - 3.8e-05 23.6 0.0 6.2e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Mga PF08280.11 gi|150399211|ref|YP_001322978.1| - 4.8e-05 23.3 0.0 9e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_28 PF13518.6 gi|150399211|ref|YP_001322978.1| - 9.6e-05 22.4 0.0 0.00014 21.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|150399211|ref|YP_001322978.1| - 0.00011 22.3 0.0 0.00028 21.0 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 gi|150399211|ref|YP_001322978.1| - 0.00013 21.9 0.0 0.0005 19.9 0.0 1.8 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|150399211|ref|YP_001322978.1| - 0.0002 21.2 0.0 0.00028 20.7 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|150399211|ref|YP_001322978.1| - 0.00045 20.0 0.0 0.0008 19.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HxlR PF01638.17 gi|150399211|ref|YP_001322978.1| - 0.00068 19.4 0.0 0.0017 18.2 0.0 1.7 1 1 0 2 2 2 1 HxlR-like helix-turn-helix HTH_23 PF13384.6 gi|150399211|ref|YP_001322978.1| - 0.0012 18.5 0.0 0.0019 17.9 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.10 gi|150399211|ref|YP_001322978.1| - 0.0024 17.6 0.0 0.004 16.9 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|150399211|ref|YP_001322978.1| - 0.003 17.4 0.0 0.0042 16.9 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_12 PF08461.10 gi|150399211|ref|YP_001322978.1| - 0.0032 17.4 0.0 0.0081 16.1 0.0 1.8 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain Mga PF05043.13 gi|150399211|ref|YP_001322978.1| - 0.0038 17.8 0.0 0.0078 16.8 0.0 1.5 1 0 0 1 1 1 1 Mga helix-turn-helix domain DUF2621 PF11084.8 gi|150399211|ref|YP_001322978.1| - 0.0039 17.2 0.0 0.0067 16.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2621) Sigma70_r4_2 PF08281.12 gi|150399211|ref|YP_001322978.1| - 0.0042 16.7 0.0 0.0071 16.0 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_27 PF13463.6 gi|150399211|ref|YP_001322978.1| - 0.0074 16.8 0.0 0.016 15.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_DeoR PF08220.12 gi|150399211|ref|YP_001322978.1| - 0.011 15.5 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain TFIIE_alpha PF02002.17 gi|150399211|ref|YP_001322978.1| - 0.013 15.4 0.2 0.03 14.2 0.0 1.7 2 0 0 2 2 2 0 TFIIE alpha subunit Sigma70_r4 PF04545.16 gi|150399211|ref|YP_001322978.1| - 0.013 15.0 0.0 0.024 14.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|150399211|ref|YP_001322978.1| - 0.016 15.2 0.0 0.026 14.5 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_9 PF08221.11 gi|150399211|ref|YP_001322978.1| - 0.016 15.3 0.0 0.038 14.1 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_34 PF13601.6 gi|150399211|ref|YP_001322978.1| - 0.018 15.2 0.0 0.041 14.1 0.0 1.6 2 0 0 2 2 1 0 Winged helix DNA-binding domain HTH_38 PF13936.6 gi|150399211|ref|YP_001322978.1| - 0.018 14.8 0.0 0.041 13.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_1 PF00126.27 gi|150399211|ref|YP_001322978.1| - 0.019 14.9 0.0 0.034 14.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Tnp_ISL3 PF13542.6 gi|150399211|ref|YP_001322978.1| - 0.024 14.1 0.0 0.04 13.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Rrf2 PF02082.20 gi|150399211|ref|YP_001322978.1| - 0.028 14.8 0.0 0.052 13.9 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_6 PF01418.17 gi|150399211|ref|YP_001322978.1| - 0.029 14.3 0.0 0.061 13.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family DDRGK PF09756.9 gi|150399211|ref|YP_001322978.1| - 0.049 13.2 0.0 0.078 12.6 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain HTH_29 PF13551.6 gi|150399211|ref|YP_001322978.1| - 0.049 13.7 0.0 0.074 13.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Phage_antitermQ PF06530.12 gi|150399211|ref|YP_001322978.1| - 0.052 13.5 0.0 0.08 12.9 0.0 1.3 1 0 0 1 1 1 0 Phage antitermination protein Q GerE PF00196.19 gi|150399211|ref|YP_001322978.1| - 0.098 12.2 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family FadR_C PF07840.12 gi|150399211|ref|YP_001322978.1| - 0.14 12.0 0.0 0.25 11.2 0.0 1.6 1 1 0 1 1 1 0 FadR C-terminal domain HK PF02110.15 gi|150399212|ref|YP_001322979.1| - 1.2e-80 270.5 0.3 1.3e-80 270.3 0.3 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Carb_kinase PF01256.17 gi|150399212|ref|YP_001322979.1| - 5.3e-07 29.4 0.1 6.4e-07 29.1 0.1 1.1 1 0 0 1 1 1 1 Carbohydrate kinase Phos_pyr_kin PF08543.12 gi|150399212|ref|YP_001322979.1| - 1.9e-05 24.2 0.3 5.3e-05 22.7 0.2 1.8 1 1 1 2 2 2 1 Phosphomethylpyrimidine kinase TMP-TENI PF02581.17 gi|150399213|ref|YP_001322980.1| - 3.3e-61 205.8 0.2 4e-61 205.5 0.2 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase NMO PF03060.15 gi|150399213|ref|YP_001322980.1| - 3.8e-05 23.3 1.4 9.7e-05 21.9 1.4 1.7 1 1 0 1 1 1 1 Nitronate monooxygenase NanE PF04131.14 gi|150399213|ref|YP_001322980.1| - 0.00083 18.6 0.2 0.0011 18.1 0.2 1.3 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase DUF561 PF04481.12 gi|150399213|ref|YP_001322980.1| - 0.0026 17.0 5.8 0.0086 15.3 0.9 2.4 1 1 2 3 3 3 2 Protein of unknown function (DUF561) ThiG PF05690.14 gi|150399213|ref|YP_001322980.1| - 0.018 14.3 0.1 0.033 13.5 0.1 1.4 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG Fer4 PF00037.27 gi|150399214|ref|YP_001322981.1| - 4.4e-14 51.6 14.3 2e-07 30.5 2.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399214|ref|YP_001322981.1| - 2.6e-10 40.3 22.7 2.5e-08 33.9 11.0 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399214|ref|YP_001322981.1| - 7.5e-10 38.8 8.9 9.5e-10 38.5 8.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399214|ref|YP_001322981.1| - 1.4e-09 38.4 22.7 8.9e-08 32.6 11.7 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399214|ref|YP_001322981.1| - 1.4e-08 34.4 12.8 5.8e-05 23.0 2.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399214|ref|YP_001322981.1| - 1.5e-08 34.2 11.0 7.4e-05 22.6 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399214|ref|YP_001322981.1| - 3e-08 33.6 23.4 4.8e-06 26.6 13.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399214|ref|YP_001322981.1| - 8.6e-08 33.0 10.0 0.00016 22.5 1.8 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|150399214|ref|YP_001322981.1| - 4.5e-07 30.3 7.0 0.0064 17.0 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399214|ref|YP_001322981.1| - 9.5e-07 28.9 10.7 0.00015 22.0 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|150399214|ref|YP_001322981.1| - 2.3e-05 24.9 12.2 0.0002 21.8 1.7 2.5 1 1 1 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|150399214|ref|YP_001322981.1| - 0.00028 21.3 14.0 0.0073 16.7 14.0 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399214|ref|YP_001322981.1| - 0.0017 19.1 18.5 0.14 13.1 4.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|150399214|ref|YP_001322981.1| - 0.0025 18.5 10.4 0.0089 16.7 1.0 2.3 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|150399214|ref|YP_001322981.1| - 0.007 17.2 6.8 0.079 13.8 1.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399214|ref|YP_001322981.1| - 0.018 15.2 12.2 0.089 13.0 3.0 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain DEAD_assoc PF08494.11 gi|150399215|ref|YP_001322982.1| - 6.8e-47 159.7 0.0 1.1e-46 159.1 0.0 1.4 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|150399215|ref|YP_001322982.1| - 3.5e-29 101.8 0.0 9e-29 100.5 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|150399215|ref|YP_001322982.1| - 6.2e-16 58.7 0.4 1.8e-14 54.0 0.0 3.2 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|150399215|ref|YP_001322982.1| - 2.4e-08 34.2 0.7 1.6e-07 31.5 0.0 2.4 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit ThrE PF06738.12 gi|150399215|ref|YP_001322982.1| - 0.048 13.0 0.1 0.5 9.7 0.0 2.1 2 0 0 2 2 2 0 Putative threonine/serine exporter SNF2_N PF00176.23 gi|150399215|ref|YP_001322982.1| - 0.052 12.3 0.0 0.14 10.8 0.0 1.7 1 1 0 1 1 1 0 SNF2 family N-terminal domain AAA_22 PF13401.6 gi|150399215|ref|YP_001322982.1| - 0.29 11.4 1.6 3.8 7.8 1.6 2.5 1 1 0 1 1 1 0 AAA domain Metallophos PF00149.28 gi|150399216|ref|YP_001322983.1| - 3.5e-09 37.5 3.4 7.2e-09 36.4 3.4 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|150399216|ref|YP_001322983.1| - 2.1e-06 28.0 0.0 3.2e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain TPR_2 PF07719.17 gi|150399217|ref|YP_001322984.1| - 1.2e-09 37.5 0.3 0.00029 20.7 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 gi|150399217|ref|YP_001322984.1| - 8.8e-08 31.7 1.3 0.00035 20.2 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|150399217|ref|YP_001322984.1| - 6.8e-06 26.2 0.0 9.2e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.6 gi|150399217|ref|YP_001322984.1| - 6.2e-05 22.9 2.7 0.16 12.3 0.0 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|150399217|ref|YP_001322984.1| - 0.0031 18.1 0.0 0.0061 17.2 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|150399217|ref|YP_001322984.1| - 0.005 17.6 0.0 0.03 15.2 0.0 2.1 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|150399217|ref|YP_001322984.1| - 0.0059 16.3 4.8 0.0071 16.0 0.2 2.6 2 1 1 3 3 3 1 TPR repeat TPR_19 PF14559.6 gi|150399217|ref|YP_001322984.1| - 0.039 14.5 0.0 0.087 13.3 0.0 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_17 PF13431.6 gi|150399217|ref|YP_001322984.1| - 0.17 12.3 0.7 42 4.8 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat BacA PF02673.18 gi|150399218|ref|YP_001322985.1| - 5e-71 239.4 18.1 5.8e-71 239.2 18.1 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA TauE PF01925.19 gi|150399218|ref|YP_001322985.1| - 3.4e-05 23.6 12.5 4.7e-05 23.1 12.5 1.3 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE AAA_31 PF13614.6 gi|150399219|ref|YP_001322986.1| - 2.4e-29 102.5 0.7 4.3e-29 101.7 0.7 1.4 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|150399219|ref|YP_001322986.1| - 2.1e-21 76.3 0.2 3.1e-21 75.8 0.2 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|150399219|ref|YP_001322986.1| - 3.7e-21 75.7 3.7 2.7e-20 72.9 3.7 2.2 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|150399219|ref|YP_001322986.1| - 3.1e-17 62.9 1.3 4.1e-16 59.2 1.3 2.0 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|150399219|ref|YP_001322986.1| - 1.3e-14 54.3 0.0 1.4e-13 50.9 0.0 2.0 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|150399219|ref|YP_001322986.1| - 6.4e-10 38.7 5.9 4.7e-09 35.9 4.2 2.7 1 1 1 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 gi|150399219|ref|YP_001322986.1| - 5.4e-09 35.7 0.5 1.6e-08 34.2 0.4 1.8 2 1 0 2 2 2 1 ATPase MipZ AAA_26 PF13500.6 gi|150399219|ref|YP_001322986.1| - 1.8e-08 34.5 1.8 1.9e-07 31.1 1.8 2.2 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|150399219|ref|YP_001322986.1| - 0.00088 19.0 2.3 0.0051 16.5 0.9 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_24 PF13479.6 gi|150399219|ref|YP_001322986.1| - 0.002 17.9 0.3 0.0039 16.9 0.3 1.5 1 1 0 1 1 1 1 AAA domain VirC1 PF07015.11 gi|150399219|ref|YP_001322986.1| - 0.0053 16.1 0.2 0.013 14.8 0.0 1.8 2 0 0 2 2 2 1 VirC1 protein AAA_25 PF13481.6 gi|150399219|ref|YP_001322986.1| - 0.014 15.0 0.0 0.021 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 gi|150399219|ref|YP_001322986.1| - 0.037 13.9 0.1 0.06 13.3 0.1 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase CLP1_P PF16575.5 gi|150399219|ref|YP_001322986.1| - 0.04 13.7 0.2 0.073 12.9 0.2 1.4 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop GATase_7 PF13537.6 gi|150399220|ref|YP_001322987.1| - 4.6e-23 81.5 0.0 6.8e-23 80.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|150399220|ref|YP_001322987.1| - 5.3e-21 75.2 0.0 9.7e-21 74.4 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|150399220|ref|YP_001322987.1| - 2.6e-08 33.1 0.0 6.7e-08 31.8 0.0 1.8 1 1 0 1 1 1 1 Glutamine amidotransferases class-II Pribosyltran PF00156.27 gi|150399220|ref|YP_001322987.1| - 3.6e-06 26.6 0.1 6.6e-06 25.7 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_2 PF00310.21 gi|150399220|ref|YP_001322987.1| - 0.036 12.8 0.0 2.9 6.5 0.0 3.0 3 1 1 4 4 4 0 Glutamine amidotransferases class-II Ribosomal_L37e PF01907.19 gi|150399221|ref|YP_001322988.1| - 5.7e-22 77.6 12.3 6.7e-22 77.4 12.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L37e DZR PF12773.7 gi|150399221|ref|YP_001322988.1| - 0.027 14.5 0.9 0.035 14.1 0.9 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-RING_10 PF16685.5 gi|150399221|ref|YP_001322988.1| - 0.031 14.4 1.6 0.038 14.1 1.6 1.2 1 0 0 1 1 1 0 zinc RING finger of MSL2 FYVE_2 PF02318.16 gi|150399221|ref|YP_001322988.1| - 0.037 14.3 2.6 0.039 14.2 2.6 1.0 1 0 0 1 1 1 0 FYVE-type zinc finger zf-piccolo PF05715.13 gi|150399221|ref|YP_001322988.1| - 0.09 12.9 2.3 0.51 10.5 2.3 1.9 1 1 0 1 1 1 0 Piccolo Zn-finger Zn_Tnp_IS1595 PF12760.7 gi|150399221|ref|YP_001322988.1| - 0.35 10.9 6.1 4 7.5 6.1 2.0 1 1 0 1 1 1 0 Transposase zinc-ribbon domain LSM PF01423.22 gi|150399222|ref|YP_001322989.1| - 1.6e-17 62.9 0.1 1.8e-17 62.8 0.1 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|150399222|ref|YP_001322989.1| - 0.00029 20.9 0.0 0.00029 20.9 0.0 1.1 1 0 0 1 1 1 1 Ataxin 2 SM domain Hfq PF17209.3 gi|150399222|ref|YP_001322989.1| - 0.02 14.5 0.0 0.024 14.3 0.0 1.2 1 0 0 1 1 1 0 Hfq protein DUF150_C PF17384.2 gi|150399222|ref|YP_001322989.1| - 0.11 12.6 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 RimP C-terminal SH3 domain Aconitase PF00330.20 gi|150399223|ref|YP_001322990.1| - 1.2e-91 308.0 7.4 5.5e-60 203.7 2.9 2.2 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) CBS PF00571.28 gi|150399224|ref|YP_001322991.1| - 1.3e-15 57.6 0.2 2.6e-07 31.0 0.0 2.2 2 0 0 2 2 2 2 CBS domain DUF1462 PF07315.11 gi|150399224|ref|YP_001322991.1| - 0.0023 18.1 0.3 0.019 15.2 0.1 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF1462) Complex1_49kDa PF00346.19 gi|150399225|ref|YP_001322992.1| - 7.6e-46 156.4 0.0 3.6e-43 147.6 0.0 2.1 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|150399225|ref|YP_001322992.1| - 1.9e-12 46.9 5.5 7e-12 45.0 1.0 2.7 2 1 1 3 3 3 2 Nickel-dependent hydrogenase Fer4_9 PF13187.6 gi|150399226|ref|YP_001322993.1| - 1.4e-10 41.2 19.5 1.8e-08 34.4 9.8 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399226|ref|YP_001322993.1| - 3.3e-10 40.3 6.9 3.3e-10 40.3 6.9 1.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399226|ref|YP_001322993.1| - 6.1e-09 36.3 7.9 6.1e-09 36.3 7.9 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399226|ref|YP_001322993.1| - 7.4e-09 35.6 8.4 7.4e-09 35.6 6.2 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399226|ref|YP_001322993.1| - 2.2e-06 28.1 9.0 6.5e-06 26.6 9.0 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399226|ref|YP_001322993.1| - 1.9e-05 25.5 7.9 0.0082 17.1 0.6 2.6 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|150399226|ref|YP_001322993.1| - 0.00017 21.6 5.1 0.00048 20.2 5.1 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399226|ref|YP_001322993.1| - 0.00019 21.1 13.0 0.023 14.5 2.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399226|ref|YP_001322993.1| - 0.0013 18.7 12.3 0.018 15.1 3.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399226|ref|YP_001322993.1| - 0.0015 18.9 11.9 0.085 13.4 3.5 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399226|ref|YP_001322993.1| - 0.018 15.1 13.2 0.36 11.0 2.8 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|150399226|ref|YP_001322993.1| - 0.041 13.6 1.0 0.041 13.6 1.0 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 gi|150399226|ref|YP_001322993.1| - 0.13 12.5 6.6 1.8 8.8 0.5 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399226|ref|YP_001322993.1| - 0.39 11.8 16.7 2.2 9.4 3.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain DUF1924 PF09086.11 gi|150399226|ref|YP_001322993.1| - 0.48 10.8 3.7 0.34 11.3 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1924) Fer4_22 PF17179.4 gi|150399226|ref|YP_001322993.1| - 1.9 9.4 11.2 10 7.0 0.5 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain CCG PF02754.16 gi|150399227|ref|YP_001322994.1| - 1.6e-39 134.0 2.9 4.3e-21 74.9 0.8 2.7 3 0 0 3 3 3 2 Cysteine-rich domain DUF2024 PF09630.10 gi|150399227|ref|YP_001322994.1| - 0.032 14.1 0.0 0.17 11.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2024) CMD PF02627.20 gi|150399228|ref|YP_001322995.1| - 2.9e-09 36.9 0.0 3.3e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family TFA2_Winged_2 PF18121.1 gi|150399228|ref|YP_001322995.1| - 0.12 12.1 0.0 0.24 11.1 0.0 1.6 1 1 0 1 1 1 0 TFA2 Winged helix domain 2 Desulfoferrodox PF01880.18 gi|150399229|ref|YP_001322996.1| - 2.2e-29 101.9 0.6 2.6e-29 101.7 0.6 1.1 1 0 0 1 1 1 1 Desulfoferrodoxin MTH865 PF07747.11 gi|150399230|ref|YP_001322997.1| - 4.7e-18 64.7 0.1 6.9e-18 64.2 0.1 1.3 1 0 0 1 1 1 1 MTH865-like family Ferritin PF00210.24 gi|150399231|ref|YP_001322998.1| - 2.6e-39 134.4 3.8 3.2e-39 134.1 3.8 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|150399231|ref|YP_001322998.1| - 8.2e-05 23.0 1.3 0.00011 22.5 1.3 1.3 1 0 0 1 1 1 1 Rubrerythrin Zn-ribbon_8 PF09723.10 gi|150399232|ref|YP_001322999.1| - 0.024 14.8 4.4 0.024 14.8 4.4 2.1 2 0 0 2 2 2 0 Zinc ribbon domain RNA_POL_M_15KD PF02150.16 gi|150399232|ref|YP_001322999.1| - 0.037 13.9 0.0 0.037 13.9 0.0 2.5 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit HypA PF01155.19 gi|150399232|ref|YP_001322999.1| - 0.037 14.0 3.9 0.037 14.0 3.9 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|150399232|ref|YP_001322999.1| - 0.11 12.0 9.4 4.1 7.0 0.0 2.7 1 1 1 2 2 2 0 TFIIB zinc-binding Rubredoxin_2 PF18073.1 gi|150399232|ref|YP_001322999.1| - 0.12 12.2 9.8 0.38 10.5 0.4 3.1 3 0 0 3 3 3 0 Rubredoxin metal binding domain DZR PF12773.7 gi|150399232|ref|YP_001322999.1| - 0.14 12.2 9.3 0.28 11.2 9.3 1.5 1 1 0 1 1 1 0 Double zinc ribbon OrfB_Zn_ribbon PF07282.11 gi|150399232|ref|YP_001322999.1| - 0.17 11.9 8.1 0.46 10.4 0.1 2.4 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|150399232|ref|YP_001322999.1| - 0.24 10.9 13.1 3 7.4 0.1 2.8 2 1 0 2 2 2 0 zinc-ribbon domain HalOD2 PF18547.1 gi|150399232|ref|YP_001322999.1| - 0.3 11.0 10.1 0.7 9.9 0.4 2.5 2 1 0 2 2 2 0 Halobacterial output domain 2 NRDD PF13597.6 gi|150399232|ref|YP_001322999.1| - 0.3 9.8 4.2 0.28 9.9 4.2 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase DUF4379 PF14311.6 gi|150399232|ref|YP_001322999.1| - 0.33 11.3 10.6 1.2 9.6 10.6 2.0 1 1 0 1 1 1 0 Probable Zinc-ribbon domain Fer4_2 PF12797.7 gi|150399232|ref|YP_001322999.1| - 0.39 10.9 8.9 2.5 8.4 5.1 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain UPF0547 PF10571.9 gi|150399232|ref|YP_001322999.1| - 0.62 10.2 0.3 0.62 10.2 0.3 3.2 2 1 1 3 3 3 0 Uncharacterised protein family UPF0547 zinc_ribbon_4 PF13717.6 gi|150399232|ref|YP_001322999.1| - 1 9.3 8.7 1.3 9.0 0.2 2.8 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|150399232|ref|YP_001322999.1| - 1.4 8.7 16.2 1.4 8.7 9.1 3.2 2 1 0 2 2 2 0 zinc-ribbon domain C1_1 PF00130.22 gi|150399232|ref|YP_001322999.1| - 1.8 8.5 8.9 0.96 9.4 0.5 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-tcix PF14952.6 gi|150399232|ref|YP_001322999.1| - 2.5 7.8 10.9 11 5.7 6.4 2.3 2 1 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Zn_Tnp_IS1595 PF12760.7 gi|150399232|ref|YP_001322999.1| - 3.8 7.6 10.2 5.9 7.0 3.7 2.4 2 1 0 2 2 2 0 Transposase zinc-ribbon domain zf-ISL3 PF14690.6 gi|150399232|ref|YP_001322999.1| - 4.2 8.1 7.6 6.7 7.5 1.8 2.7 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF983 PF06170.12 gi|150399232|ref|YP_001322999.1| - 8.5 6.9 7.2 3.7 8.0 2.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF983) DrsE PF02635.15 gi|150399233|ref|YP_001323000.1| - 2.3e-05 24.7 0.0 2.5e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family U62_UL91 PF17442.2 gi|150399233|ref|YP_001323000.1| - 0.026 14.5 0.0 0.19 11.8 0.0 2.0 2 0 0 2 2 2 0 Functional domain of U62 and UL91 proteins zinc_ribbon_5 PF13719.6 gi|150399233|ref|YP_001323000.1| - 0.045 13.5 0.4 0.42 10.4 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Flavodoxin_1 PF00258.25 gi|150399234|ref|YP_001323001.1| - 1.6e-11 44.6 0.0 4.5e-11 43.1 0.0 1.7 2 0 0 2 2 2 1 Flavodoxin Lactamase_B PF00753.27 gi|150399234|ref|YP_001323001.1| - 8.5e-11 42.2 0.0 1.3e-10 41.7 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_5 PF12724.7 gi|150399234|ref|YP_001323001.1| - 2.6e-05 24.5 0.1 7e-05 23.1 0.0 1.7 2 0 0 2 2 2 1 Flavodoxin domain Lactamase_B_2 PF12706.7 gi|150399234|ref|YP_001323001.1| - 0.00012 21.6 0.0 0.00016 21.3 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain CutA1 PF03091.15 gi|150399235|ref|YP_001323002.1| - 8.2e-25 86.5 0.5 9.1e-25 86.4 0.5 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein Spc7_C2 PF15577.6 gi|150399235|ref|YP_001323002.1| - 0.064 13.3 0.1 0.12 12.5 0.1 1.6 1 0 0 1 1 1 0 Spc7_C2 DUF5309 PF17236.2 gi|150399235|ref|YP_001323002.1| - 0.092 12.1 0.1 0.16 11.3 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5309) HMA PF00403.26 gi|150399236|ref|YP_001323003.1| - 8.5e-10 38.9 0.1 1.3e-09 38.3 0.1 1.3 1 0 0 1 1 1 1 Heavy-metal-associated domain Type2_restr_D3 PF16902.5 gi|150399236|ref|YP_001323003.1| - 0.0079 16.1 0.8 0.013 15.4 0.8 1.3 1 0 0 1 1 1 1 Type-2 restriction enzyme D3 domain RMI1_C PF16099.5 gi|150399236|ref|YP_001323003.1| - 0.012 15.4 0.1 0.019 14.8 0.1 1.3 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold RRM_3 PF08777.11 gi|150399236|ref|YP_001323003.1| - 0.026 14.6 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 RNA binding motif G-7-MTase PF12803.7 gi|150399236|ref|YP_001323003.1| - 0.047 12.8 0.2 0.051 12.7 0.2 1.1 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) E1-E2_ATPase PF00122.20 gi|150399237|ref|YP_001323004.1| - 8.1e-56 188.4 4.6 1.4e-55 187.6 3.4 2.0 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|150399237|ref|YP_001323004.1| - 1.5e-38 133.2 0.2 2.3e-38 132.6 0.2 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|150399237|ref|YP_001323004.1| - 4.6e-14 52.6 6.2 1e-13 51.5 1.1 3.0 2 0 0 2 2 2 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|150399237|ref|YP_001323004.1| - 0.0028 17.5 4.9 0.0053 16.5 0.1 3.0 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase DUF3981 PF13139.6 gi|150399237|ref|YP_001323004.1| - 0.02 15.3 0.2 0.11 12.9 0.2 2.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3981) HAD PF12710.7 gi|150399237|ref|YP_001323004.1| - 0.16 12.3 0.0 0.33 11.3 0.0 1.5 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase FMN_red PF03358.15 gi|150399238|ref|YP_001323005.1| - 2.2e-34 118.4 0.0 2.7e-34 118.2 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|150399238|ref|YP_001323005.1| - 2.1e-08 34.1 0.0 2.8e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavoprotein PF02441.19 gi|150399239|ref|YP_001323006.1| - 1.2e-19 70.6 0.0 5.9e-19 68.3 0.0 1.8 1 1 0 1 1 1 1 Flavoprotein Inhibitor_G39P PF11417.8 gi|150399239|ref|YP_001323006.1| - 0.022 15.3 1.3 0.064 13.8 0.3 2.1 2 0 0 2 2 2 0 Loader and inhibitor of phage G40P ABC_tran PF00005.27 gi|150399240|ref|YP_001323007.1| - 4.7e-22 79.0 0.0 6.4e-22 78.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|150399240|ref|YP_001323007.1| - 1.2e-07 31.8 1.4 0.0042 16.9 0.7 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|150399240|ref|YP_001323007.1| - 4.6e-06 26.6 0.0 1.2e-05 25.3 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 gi|150399240|ref|YP_001323007.1| - 0.0002 20.8 0.2 0.017 14.5 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|150399240|ref|YP_001323007.1| - 0.001 18.8 0.0 0.0019 17.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|150399240|ref|YP_001323007.1| - 0.0012 19.4 0.4 0.0028 18.2 0.2 1.6 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 gi|150399240|ref|YP_001323007.1| - 0.0021 18.1 0.1 0.0049 16.9 0.0 1.8 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|150399240|ref|YP_001323007.1| - 0.0029 17.8 0.0 0.005 17.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_27 PF13514.6 gi|150399240|ref|YP_001323007.1| - 0.0039 16.8 0.0 0.0073 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 gi|150399240|ref|YP_001323007.1| - 0.019 14.6 0.0 0.044 13.4 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.6 gi|150399240|ref|YP_001323007.1| - 0.021 14.4 0.0 0.035 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|150399240|ref|YP_001323007.1| - 0.025 15.0 0.0 0.034 14.5 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain ATPase_2 PF01637.18 gi|150399240|ref|YP_001323007.1| - 0.029 14.3 0.0 0.045 13.7 0.0 1.4 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea Dynamin_N PF00350.23 gi|150399240|ref|YP_001323007.1| - 0.03 14.4 0.0 0.074 13.1 0.0 1.6 2 0 0 2 2 2 0 Dynamin family AAA_15 PF13175.6 gi|150399240|ref|YP_001323007.1| - 0.043 13.5 0.0 0.063 13.0 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|150399240|ref|YP_001323007.1| - 0.078 13.2 0.0 0.26 11.5 0.0 1.8 2 1 0 2 2 2 0 AAA domain AIG1 PF04548.16 gi|150399240|ref|YP_001323007.1| - 0.091 12.1 0.0 0.17 11.2 0.0 1.5 1 0 0 1 1 1 0 AIG1 family AAA PF00004.29 gi|150399240|ref|YP_001323007.1| - 0.1 13.0 0.1 0.71 10.3 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CdhC PF03598.15 gi|150399240|ref|YP_001323007.1| - 0.12 12.3 0.0 1.5 8.7 0.0 2.5 1 1 2 3 3 3 0 CO dehydrogenase/acetyl-CoA synthase complex beta subunit UPF0051 PF01458.17 gi|150399241|ref|YP_001323008.1| - 5.7e-61 206.0 0.6 7e-61 205.7 0.6 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Glycos_transf_2 PF00535.26 gi|150399242|ref|YP_001323009.1| - 3e-28 98.8 0.0 4e-28 98.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|150399242|ref|YP_001323009.1| - 9.7e-05 22.4 0.0 0.00012 22.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|150399242|ref|YP_001323009.1| - 0.0025 18.3 0.0 0.0039 17.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|150399242|ref|YP_001323009.1| - 0.06 12.8 0.0 0.077 12.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 CDP-OH_P_transf PF01066.21 gi|150399243|ref|YP_001323010.1| - 2e-14 54.1 2.6 2e-14 54.1 2.6 3.4 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase AhpC-TSA PF00578.21 gi|150399244|ref|YP_001323011.1| - 1.7e-29 102.3 0.0 2.3e-29 101.8 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|150399244|ref|YP_001323011.1| - 3.6e-14 52.7 0.0 5.3e-14 52.2 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|150399244|ref|YP_001323011.1| - 6.5e-06 25.9 0.1 1.2e-05 25.0 0.1 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Dimerisation2 PF16864.5 gi|150399245|ref|YP_001323012.1| - 8.3e-10 38.5 0.2 1.6e-09 37.6 0.2 1.4 1 0 0 1 1 1 1 Dimerisation domain Methyltransf_2 PF00891.18 gi|150399245|ref|YP_001323012.1| - 1.5e-07 30.9 0.0 2.8e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 O-methyltransferase domain Ubie_methyltran PF01209.18 gi|150399245|ref|YP_001323012.1| - 0.00014 21.3 0.0 0.00026 20.4 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TrmB PF01978.19 gi|150399245|ref|YP_001323012.1| - 0.012 15.5 1.6 0.68 9.9 0.3 2.6 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB Methyltransf_25 PF13649.6 gi|150399245|ref|YP_001323012.1| - 0.012 16.3 0.0 0.023 15.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|150399245|ref|YP_001323012.1| - 0.021 14.6 0.0 0.035 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Dimerisation PF08100.11 gi|150399245|ref|YP_001323012.1| - 0.031 14.3 0.1 0.092 12.8 0.1 1.8 1 0 0 1 1 1 0 Dimerisation domain MTS PF05175.14 gi|150399245|ref|YP_001323012.1| - 0.034 13.7 0.0 0.059 12.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Peripla_BP_2 PF01497.18 gi|150399246|ref|YP_001323013.1| - 4.6e-25 88.6 0.2 1.7e-24 86.7 0.1 1.7 2 0 0 2 2 2 1 Periplasmic binding protein Peripla_BP_2 PF01497.18 gi|150399247|ref|YP_001323014.1| - 1.9e-21 76.7 0.0 2.4e-21 76.4 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_2 PF01497.18 gi|150399248|ref|YP_001323015.1| - 3.6e-19 69.3 0.0 4.8e-19 68.9 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_2 PF01497.18 gi|150399249|ref|YP_001323016.1| - 4.7e-32 111.5 0.0 7.3e-32 110.8 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein ZnuA PF01297.17 gi|150399249|ref|YP_001323016.1| - 0.03 13.8 0.0 0.17 11.3 0.0 2.0 1 1 1 2 2 2 0 Zinc-uptake complex component A periplasmic FecCD PF01032.18 gi|150399250|ref|YP_001323017.1| - 9.6e-96 320.4 31.0 1.3e-95 320.1 31.0 1.1 1 0 0 1 1 1 1 FecCD transport family ABC_tran PF00005.27 gi|150399251|ref|YP_001323018.1| - 5.7e-33 114.3 0.2 8.5e-33 113.8 0.2 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|150399251|ref|YP_001323018.1| - 7.4e-08 32.6 1.4 0.0021 17.9 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|150399251|ref|YP_001323018.1| - 3.8e-05 23.2 3.0 0.00016 21.2 3.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|150399251|ref|YP_001323018.1| - 8e-05 23.2 3.6 0.0002 21.9 3.6 1.7 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|150399251|ref|YP_001323018.1| - 0.00023 21.4 2.0 0.0059 16.9 2.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|150399251|ref|YP_001323018.1| - 0.00037 20.3 8.9 0.007 16.1 2.5 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|150399251|ref|YP_001323018.1| - 0.00044 19.9 0.1 0.00092 18.9 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_14 PF13173.6 gi|150399251|ref|YP_001323018.1| - 0.0011 19.0 0.7 0.025 14.6 0.0 2.3 2 1 0 2 2 2 1 AAA domain SbcCD_C PF13558.6 gi|150399251|ref|YP_001323018.1| - 0.0098 16.1 0.0 0.25 11.6 0.0 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 gi|150399251|ref|YP_001323018.1| - 0.012 15.3 0.1 0.019 14.7 0.1 1.5 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|150399251|ref|YP_001323018.1| - 0.016 14.4 3.1 0.091 11.9 3.1 2.1 1 1 0 1 1 1 0 NB-ARC domain DUF3584 PF12128.8 gi|150399251|ref|YP_001323018.1| - 0.016 12.8 0.1 0.022 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Mg_chelatase PF01078.21 gi|150399251|ref|YP_001323018.1| - 0.016 14.6 0.0 0.024 14.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|150399251|ref|YP_001323018.1| - 0.017 15.5 0.0 0.028 14.8 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 gi|150399251|ref|YP_001323018.1| - 0.023 13.4 0.6 0.15 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|150399251|ref|YP_001323018.1| - 0.061 12.9 0.6 0.13 11.9 0.1 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain RsgA_GTPase PF03193.16 gi|150399251|ref|YP_001323018.1| - 0.067 13.1 0.4 0.2 11.5 0.1 1.9 2 0 0 2 2 2 0 RsgA GTPase PRK PF00485.18 gi|150399251|ref|YP_001323018.1| - 0.075 12.8 0.1 0.17 11.6 0.0 1.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Rad17 PF03215.15 gi|150399251|ref|YP_001323018.1| - 0.12 12.3 2.6 0.12 12.3 0.9 1.8 1 1 1 2 2 2 0 Rad17 P-loop domain AAA_27 PF13514.6 gi|150399251|ref|YP_001323018.1| - 0.19 11.3 0.0 0.39 10.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|150399251|ref|YP_001323018.1| - 0.19 12.1 1.0 1 9.8 0.9 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|150399251|ref|YP_001323018.1| - 0.27 11.8 2.1 2.3 8.8 0.2 2.2 1 1 0 2 2 2 0 AAA domain Acetyltransf_1 PF00583.25 gi|150399252|ref|YP_001323019.1| - 3.6e-15 56.2 0.0 5e-15 55.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|150399252|ref|YP_001323019.1| - 6.5e-11 42.5 0.5 1.4e-10 41.4 0.5 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|150399252|ref|YP_001323019.1| - 2.1e-09 37.4 0.0 1e-08 35.2 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|150399252|ref|YP_001323019.1| - 3.4e-07 30.1 0.1 5.9e-07 29.4 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|150399252|ref|YP_001323019.1| - 0.00015 21.9 0.1 0.0078 16.3 0.1 2.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|150399252|ref|YP_001323019.1| - 0.00021 20.8 2.0 0.00027 20.5 2.0 1.4 1 1 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_4 PF13420.7 gi|150399252|ref|YP_001323019.1| - 0.00073 19.7 1.7 0.022 14.9 0.3 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|150399252|ref|YP_001323019.1| - 0.046 13.9 0.0 0.085 13.0 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase HycI PF01750.18 gi|150399253|ref|YP_001323020.1| - 3.5e-20 72.1 1.1 5.2e-20 71.6 0.9 1.5 2 1 0 2 2 2 1 Hydrogenase maturation protease CAS_CSE1 PF03378.15 gi|150399253|ref|YP_001323020.1| - 0.039 12.4 0.1 0.058 11.9 0.1 1.3 1 0 0 1 1 1 0 CAS/CSE protein, C-terminus Lon_C PF05362.13 gi|150399254|ref|YP_001323021.1| - 7.2e-22 77.9 0.1 7.2e-22 77.9 0.1 1.7 2 0 0 2 2 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.6 gi|150399254|ref|YP_001323021.1| - 9.5e-18 64.3 0.0 3.6e-15 55.7 0.0 2.5 2 1 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|150399254|ref|YP_001323021.1| - 3.8e-12 46.0 0.2 0.00011 21.7 0.0 3.1 2 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|150399254|ref|YP_001323021.1| - 1.4e-10 41.2 0.0 6.6e-07 29.2 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_5 PF07728.14 gi|150399254|ref|YP_001323021.1| - 7.3e-08 32.5 0.0 0.0098 15.9 0.0 3.2 2 1 1 3 3 3 2 AAA domain (dynein-related subfamily) ChlI PF13541.6 gi|150399254|ref|YP_001323021.1| - 1e-07 31.8 0.1 3.1e-07 30.3 0.1 1.9 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase MCM PF00493.23 gi|150399254|ref|YP_001323021.1| - 1.2e-06 27.8 4.6 0.0085 15.2 0.3 3.3 3 1 0 3 3 3 2 MCM P-loop domain RuvB_N PF05496.12 gi|150399254|ref|YP_001323021.1| - 1.6e-06 28.0 0.1 0.012 15.3 0.0 2.9 3 0 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_7 PF12775.7 gi|150399254|ref|YP_001323021.1| - 0.0012 18.4 0.0 0.0039 16.7 0.0 1.9 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA PF00004.29 gi|150399254|ref|YP_001323021.1| - 0.0013 19.1 0.2 0.21 12.0 0.0 3.2 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 gi|150399254|ref|YP_001323021.1| - 0.0043 16.9 0.0 2.3 8.1 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|150399254|ref|YP_001323021.1| - 0.0057 17.1 0.0 0.013 15.9 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|150399254|ref|YP_001323021.1| - 0.0065 16.7 0.0 0.033 14.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|150399254|ref|YP_001323021.1| - 0.01 15.6 0.0 0.04 13.6 0.0 1.9 3 0 0 3 3 2 0 AAA domain TniB PF05621.11 gi|150399254|ref|YP_001323021.1| - 0.04 13.3 0.6 0.55 9.6 0.0 2.5 2 0 0 2 2 2 0 Bacterial TniB protein NACHT PF05729.12 gi|150399254|ref|YP_001323021.1| - 0.04 13.8 0.0 0.1 12.5 0.0 1.7 1 0 0 1 1 1 0 NACHT domain AAA_19 PF13245.6 gi|150399254|ref|YP_001323021.1| - 0.06 13.7 0.4 0.46 10.8 0.0 2.5 3 0 0 3 3 2 0 AAA domain IstB_IS21 PF01695.17 gi|150399254|ref|YP_001323021.1| - 0.087 12.5 0.0 0.23 11.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein RNA_helicase PF00910.22 gi|150399254|ref|YP_001323021.1| - 0.12 12.8 0.1 0.92 9.9 0.0 2.5 3 0 0 3 3 3 0 RNA helicase MARVEL PF01284.23 gi|150399254|ref|YP_001323021.1| - 0.13 12.3 4.6 0.24 11.4 4.6 1.3 1 0 0 1 1 1 0 Membrane-associating domain Clathrin-link PF09268.10 gi|150399254|ref|YP_001323021.1| - 0.18 11.2 1.8 6.6 6.2 0.3 2.6 2 0 0 2 2 2 0 Clathrin, heavy-chain linker AAA_10 PF12846.7 gi|150399254|ref|YP_001323021.1| - 0.21 10.4 0.0 0.21 10.4 0.0 3.0 3 1 0 3 3 3 0 AAA-like domain DUF2929 PF11151.8 gi|150399254|ref|YP_001323021.1| - 0.55 10.6 2.3 1.5 9.1 2.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2929) DUF87 PF01935.17 gi|150399254|ref|YP_001323021.1| - 2.1 8.4 9.0 1 9.4 0.1 2.9 3 0 0 3 3 3 0 Helicase HerA, central domain PRANC PF09372.10 gi|150399254|ref|YP_001323021.1| - 3 8.2 0.0 3 8.2 0.0 4.2 3 1 1 4 4 4 0 PRANC domain Aldolase_II PF00596.21 gi|150399255|ref|YP_001323022.1| - 6.3e-44 150.1 0.0 7e-44 150.0 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain UPF0147 PF03685.13 gi|150399256|ref|YP_001323023.1| - 4.9e-36 122.7 1.8 5.4e-36 122.5 1.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.12 gi|150399256|ref|YP_001323023.1| - 0.064 13.6 0.3 6.5 7.1 0.2 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) Rib_5-P_isom_A PF06026.14 gi|150399257|ref|YP_001323024.1| - 2e-60 203.3 0.1 2.9e-60 202.8 0.1 1.2 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|150399257|ref|YP_001323024.1| - 1.4e-06 28.4 0.1 3.2e-05 23.9 0.0 2.2 2 0 0 2 2 2 1 DeoR C terminal sensor domain Sugar-bind PF04198.13 gi|150399257|ref|YP_001323024.1| - 0.095 11.8 0.0 0.16 11.1 0.0 1.2 1 0 0 1 1 1 0 Putative sugar-binding domain FKBP_C PF00254.28 gi|150399258|ref|YP_001323025.1| - 1.5e-21 76.5 0.0 2.4e-21 75.9 0.0 1.4 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase MCH PF02289.16 gi|150399259|ref|YP_001323026.1| - 2.3e-127 424.6 0.1 2.6e-127 424.4 0.1 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) Radical_SAM PF04055.21 gi|150399260|ref|YP_001323027.1| - 4.6e-13 49.9 1.0 1.3e-12 48.4 0.2 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|150399260|ref|YP_001323027.1| - 1.6e-05 25.0 3.4 2.7e-05 24.3 0.1 2.8 3 1 0 3 3 3 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|150399260|ref|YP_001323027.1| - 0.00037 20.8 3.4 0.0014 18.9 0.5 2.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain UPF0113_N PF17833.1 gi|150399260|ref|YP_001323027.1| - 8.3 7.0 10.1 0.66 10.6 1.8 3.1 3 1 0 3 3 3 0 UPF0113 Pre-PUA domain Big_7 PF17957.1 gi|150399261|ref|YP_001323028.1| - 7.6e-13 49.0 1.9 0.00028 21.6 0.1 6.2 6 0 0 6 6 6 2 Bacterial Ig domain Big_4 PF07532.11 gi|150399261|ref|YP_001323028.1| - 0.059 13.1 1.8 6.9 6.5 0.0 3.6 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 4) zf-CHY PF05495.12 gi|150399261|ref|YP_001323028.1| - 0.65 10.5 14.0 0.041 14.4 6.3 2.9 2 0 0 2 2 2 0 CHY zinc finger DUF4183 PF13799.6 gi|150399262|ref|YP_001323029.1| - 0.00012 21.8 0.6 1.2 9.0 0.0 4.1 3 0 0 3 3 3 1 Domain of unknown function (DUF4183) DUF5634 PF18681.1 gi|150399262|ref|YP_001323029.1| - 0.0016 18.8 1.1 27 5.2 0.0 3.4 3 0 0 3 3 3 3 Family of unknown function (DUF5634) SH3BGR PF04908.15 gi|150399262|ref|YP_001323029.1| - 0.002 18.3 0.3 11 6.2 0.0 3.9 4 0 0 4 4 4 1 SH3-binding, glutamic acid-rich protein CaiF_GrlA PF07180.11 gi|150399262|ref|YP_001323029.1| - 0.01 15.8 0.0 6.7 6.7 0.0 2.9 3 0 0 3 3 3 0 CaiF/GrlA transcriptional regulator DUF229 PF02995.17 gi|150399262|ref|YP_001323029.1| - 0.026 13.1 1.4 5.2 5.6 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF229) DOMON PF03351.17 gi|150399263|ref|YP_001323030.1| - 0.0026 17.9 0.3 0.033 14.4 0.0 2.2 2 0 0 2 2 2 1 DOMON domain BPD_transp_1 PF00528.22 gi|150399264|ref|YP_001323031.1| - 1e-19 71.0 13.8 1e-19 71.0 13.8 1.6 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|150399265|ref|YP_001323032.1| - 6.1e-32 111.0 0.0 9.3e-32 110.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA PF00004.29 gi|150399265|ref|YP_001323032.1| - 7.2e-07 29.7 0.6 9.6e-06 26.1 0.6 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.6 gi|150399265|ref|YP_001323032.1| - 5.1e-06 26.5 0.0 0.05 13.4 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|150399265|ref|YP_001323032.1| - 3.9e-05 23.5 0.1 0.067 12.9 0.0 2.3 1 1 1 2 2 2 2 AAA ATPase domain Rad17 PF03215.15 gi|150399265|ref|YP_001323032.1| - 0.00023 21.2 0.2 0.0009 19.2 0.0 1.9 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_22 PF13401.6 gi|150399265|ref|YP_001323032.1| - 0.00023 21.4 0.1 0.0013 19.0 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|150399265|ref|YP_001323032.1| - 0.00053 20.4 0.0 0.00075 19.9 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|150399265|ref|YP_001323032.1| - 0.00057 19.4 0.3 0.62 9.4 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain ATPase_2 PF01637.18 gi|150399265|ref|YP_001323032.1| - 0.005 16.8 0.3 0.041 13.8 0.3 2.1 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 gi|150399265|ref|YP_001323032.1| - 0.0052 16.7 0.1 0.011 15.7 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 gi|150399265|ref|YP_001323032.1| - 0.0066 16.2 0.0 0.29 10.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|150399265|ref|YP_001323032.1| - 0.0078 15.9 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|150399265|ref|YP_001323032.1| - 0.013 16.0 0.1 0.74 10.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|150399265|ref|YP_001323032.1| - 0.019 15.1 0.0 0.043 14.0 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|150399265|ref|YP_001323032.1| - 0.021 14.9 0.2 0.48 10.5 0.0 3.0 1 1 1 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|150399265|ref|YP_001323032.1| - 0.043 13.7 0.6 8.6 6.2 0.2 2.4 2 0 0 2 2 2 0 NTPase APS_kinase PF01583.20 gi|150399265|ref|YP_001323032.1| - 0.058 13.3 0.0 9.3 6.1 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase PRK PF00485.18 gi|150399265|ref|YP_001323032.1| - 0.059 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_28 PF13521.6 gi|150399265|ref|YP_001323032.1| - 0.061 13.6 0.0 0.3 11.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|150399265|ref|YP_001323032.1| - 0.064 13.0 0.1 0.31 10.7 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|150399265|ref|YP_001323032.1| - 0.083 13.4 0.3 0.19 12.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|150399265|ref|YP_001323032.1| - 0.1 12.1 0.1 0.37 10.3 0.0 2.0 2 1 0 2 2 2 0 P-loop containing dynein motor region AAA_25 PF13481.6 gi|150399265|ref|YP_001323032.1| - 0.1 12.1 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|150399265|ref|YP_001323032.1| - 0.11 12.9 0.5 0.46 10.9 0.1 2.2 3 0 0 3 3 3 0 RNA helicase AAA_5 PF07728.14 gi|150399265|ref|YP_001323032.1| - 0.12 12.4 0.1 0.48 10.4 0.1 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 gi|150399265|ref|YP_001323032.1| - 0.15 12.4 0.3 6.7 7.0 0.0 3.1 3 1 0 3 3 3 0 AAA domain Dynamin_N PF00350.23 gi|150399265|ref|YP_001323032.1| - 0.42 10.7 3.7 2 8.5 0.1 2.6 3 1 0 3 3 2 0 Dynamin family PhoU PF01895.19 gi|150399266|ref|YP_001323033.1| - 4e-17 62.5 11.9 1.4e-11 44.7 4.1 2.7 2 0 0 2 2 2 2 PhoU domain HTH_24 PF13412.6 gi|150399266|ref|YP_001323033.1| - 7.1e-06 25.5 0.1 1.5e-05 24.4 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|150399266|ref|YP_001323033.1| - 9.5e-05 22.2 0.0 0.00019 21.3 0.0 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|150399266|ref|YP_001323033.1| - 0.0001 22.1 0.1 0.00037 20.3 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|150399266|ref|YP_001323033.1| - 0.00012 22.4 0.3 0.00074 19.8 0.1 2.4 3 0 0 3 3 2 1 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|150399266|ref|YP_001323033.1| - 0.00018 21.4 0.0 0.00048 20.0 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|150399266|ref|YP_001323033.1| - 0.00043 20.2 0.0 0.0009 19.1 0.0 1.6 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 gi|150399266|ref|YP_001323033.1| - 0.0013 18.6 0.0 0.003 17.4 0.0 1.6 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|150399266|ref|YP_001323033.1| - 0.016 15.1 0.2 0.016 15.1 0.2 2.4 2 1 0 2 2 2 0 TFIIE alpha subunit Sigma70_r4 PF04545.16 gi|150399266|ref|YP_001323033.1| - 0.016 14.7 0.0 0.052 13.1 0.0 1.9 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.6 gi|150399266|ref|YP_001323033.1| - 0.023 14.5 0.0 0.053 13.3 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.6 gi|150399266|ref|YP_001323033.1| - 0.027 14.5 0.0 0.11 12.5 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn helix HTH_3 PF01381.22 gi|150399266|ref|YP_001323033.1| - 0.045 13.8 0.0 0.11 12.6 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix DUF3235 PF11574.8 gi|150399266|ref|YP_001323033.1| - 0.067 14.1 0.1 0.14 13.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3235) HTH_28 PF13518.6 gi|150399266|ref|YP_001323033.1| - 0.09 12.9 0.0 0.26 11.4 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_36 PF13730.6 gi|150399266|ref|YP_001323033.1| - 0.13 12.3 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Orn_Arg_deC_N PF02784.16 gi|150399267|ref|YP_001323034.1| - 2.6e-57 194.1 0.3 4.5e-57 193.3 0.3 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|150399267|ref|YP_001323034.1| - 1e-22 80.2 0.0 1.4e-21 76.5 0.0 2.1 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SNase PF00565.17 gi|150399268|ref|YP_001323035.1| - 3.6e-26 91.7 0.1 5.1e-26 91.3 0.1 1.2 1 0 0 1 1 1 1 Staphylococcal nuclease homologue DUF5040 PF16443.5 gi|150399268|ref|YP_001323035.1| - 0.005 16.3 0.8 0.0069 15.8 0.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5040) TrmO PF01980.16 gi|150399269|ref|YP_001323036.1| - 3.4e-24 85.4 0.0 4.1e-24 85.1 0.0 1.0 1 0 0 1 1 1 1 tRNA-methyltransferase O SnoaL PF07366.12 gi|150399269|ref|YP_001323036.1| - 0.04 13.7 0.0 0.063 13.1 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase CbiD PF01888.17 gi|150399270|ref|YP_001323037.1| - 8.3e-91 303.8 1.6 1.1e-90 303.4 1.6 1.1 1 0 0 1 1 1 1 CbiD Peptidase_M24 PF00557.24 gi|150399271|ref|YP_001323038.1| - 1e-51 175.6 0.1 1.3e-51 175.3 0.1 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF4649 PF15507.6 gi|150399271|ref|YP_001323038.1| - 0.0054 16.7 0.0 0.016 15.1 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4649) EPSP_synthase PF00275.20 gi|150399272|ref|YP_001323039.1| - 5.8e-129 430.4 0.3 6.5e-129 430.3 0.3 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Gln-synt_C PF00120.24 gi|150399273|ref|YP_001323040.1| - 1.9e-131 438.2 0.0 2.2e-131 438.0 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|150399273|ref|YP_001323040.1| - 4.3e-29 100.1 0.1 1.8e-28 98.1 0.0 2.0 2 0 0 2 2 2 1 Glutamine synthetase, beta-Grasp domain Ribosomal_S6e PF01092.19 gi|150399274|ref|YP_001323041.1| - 5.3e-39 133.0 0.2 6e-39 132.9 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.27 gi|150399275|ref|YP_001323042.1| - 2.1e-32 112.3 1.2 1.1e-31 110.0 1.2 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|150399275|ref|YP_001323042.1| - 4.9e-31 106.8 0.4 1.4e-30 105.4 0.4 1.9 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 gi|150399275|ref|YP_001323042.1| - 8.3e-09 35.7 1.0 2.5e-08 34.2 1.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RsgA_GTPase PF03193.16 gi|150399275|ref|YP_001323042.1| - 5.1e-05 23.2 0.7 0.00043 20.2 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|150399275|ref|YP_001323042.1| - 0.00019 21.5 0.0 0.00067 19.7 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase MMR_HSR1_Xtn PF16897.5 gi|150399275|ref|YP_001323042.1| - 0.00068 19.6 0.0 0.0017 18.4 0.0 1.6 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain PduV-EutP PF10662.9 gi|150399275|ref|YP_001323042.1| - 0.012 15.4 0.4 3 7.6 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation MeaB PF03308.16 gi|150399275|ref|YP_001323042.1| - 0.026 13.5 0.3 0.072 12.1 0.0 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Arf PF00025.21 gi|150399275|ref|YP_001323042.1| - 0.048 13.1 0.1 0.18 11.2 0.0 1.9 2 0 0 2 2 2 0 ADP-ribosylation factor family ILEI PF15711.5 gi|150399275|ref|YP_001323042.1| - 0.053 14.0 0.0 0.13 12.8 0.0 1.6 1 0 0 1 1 1 0 Interleukin-like EMT inducer cobW PF02492.19 gi|150399275|ref|YP_001323042.1| - 0.28 10.7 3.5 1.4 8.4 3.5 2.1 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain FeoB_N PF02421.18 gi|150399275|ref|YP_001323042.1| - 0.8 9.2 3.2 29 4.2 0.3 3.1 3 1 0 3 3 3 0 Ferrous iron transport protein B NurA PF09376.10 gi|150399276|ref|YP_001323043.1| - 1.3e-38 133.1 5.5 1.6e-38 132.8 5.5 1.1 1 0 0 1 1 1 1 NurA domain DUF1996 PF09362.10 gi|150399276|ref|YP_001323043.1| - 0.04 13.9 0.0 0.08 12.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1996) HTH_3 PF01381.22 gi|150399277|ref|YP_001323044.1| - 5.8e-08 32.7 0.0 1.9e-07 31.1 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|150399277|ref|YP_001323044.1| - 5.9e-06 26.2 0.2 3.5e-05 23.8 0.0 2.4 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|150399277|ref|YP_001323044.1| - 0.058 13.7 0.0 0.099 13.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain ACP_syn_III_C PF08541.10 gi|150399278|ref|YP_001323045.1| - 1.2e-10 41.4 0.1 3.8e-10 39.8 0.0 1.9 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.10 gi|150399278|ref|YP_001323045.1| - 1e-05 25.3 1.2 0.0049 16.5 0.1 2.2 1 1 1 2 2 2 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thiolase_N PF00108.23 gi|150399278|ref|YP_001323045.1| - 4e-05 23.1 0.8 6.3e-05 22.5 0.8 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain HMG_CoA_synt_N PF01154.17 gi|150399278|ref|YP_001323045.1| - 0.00014 21.8 0.2 0.00022 21.1 0.2 1.3 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ACP_syn_III PF08545.10 gi|150399278|ref|YP_001323045.1| - 0.037 13.9 3.8 0.059 13.2 1.3 2.4 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ketoacyl-synt PF00109.26 gi|150399278|ref|YP_001323045.1| - 0.2 11.2 2.7 9.5 5.7 0.0 2.4 1 1 1 2 2 2 0 Beta-ketoacyl synthase, N-terminal domain Thiolase_N PF00108.23 gi|150399279|ref|YP_001323046.1| - 1.4e-27 96.7 0.1 4.1e-27 95.2 0.1 1.8 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|150399279|ref|YP_001323046.1| - 6.2e-11 42.0 0.4 1.4e-10 40.9 0.1 1.8 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|150399279|ref|YP_001323046.1| - 1.4e-06 28.1 3.4 4.3e-06 26.5 1.5 2.1 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|150399279|ref|YP_001323046.1| - 0.00063 19.6 0.2 0.022 14.6 0.2 2.4 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OB_aCoA_assoc PF01796.17 gi|150399280|ref|YP_001323047.1| - 6.6e-20 70.9 0.0 9.2e-20 70.4 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|150399280|ref|YP_001323047.1| - 2.6e-11 43.2 1.2 3.5e-11 42.8 1.2 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Pro_racemase PF05544.11 gi|150399281|ref|YP_001323048.1| - 0.2 10.7 0.0 0.24 10.4 0.0 1.1 1 0 0 1 1 1 0 Proline racemase GATase_3 PF07685.14 gi|150399282|ref|YP_001323049.1| - 1.8e-43 148.5 1.1 2.8e-43 147.8 0.4 1.7 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|150399282|ref|YP_001323049.1| - 1.3e-21 77.0 0.2 4.5e-21 75.2 0.0 1.9 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|150399282|ref|YP_001323049.1| - 7.1e-21 74.9 0.2 3.3e-20 72.8 0.2 1.9 1 1 0 1 1 1 1 AAA domain SNO PF01174.19 gi|150399282|ref|YP_001323049.1| - 2.2e-05 24.4 0.1 5.2e-05 23.2 0.1 1.6 1 0 0 1 1 1 1 SNO glutamine amidotransferase family MobB PF03205.14 gi|150399282|ref|YP_001323049.1| - 7.8e-05 22.6 0.0 0.0011 18.9 0.0 2.3 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B DJ-1_PfpI PF01965.24 gi|150399282|ref|YP_001323049.1| - 0.013 15.3 0.0 0.049 13.4 0.0 1.9 2 0 0 2 2 2 0 DJ-1/PfpI family GATase_5 PF13507.6 gi|150399282|ref|YP_001323049.1| - 0.028 13.5 0.1 0.057 12.5 0.1 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DUF1611 PF07755.11 gi|150399282|ref|YP_001323049.1| - 0.15 11.3 0.1 8.7 5.6 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_C) P-loop domain Aminotran_1_2 PF00155.21 gi|150399283|ref|YP_001323050.1| - 6.3e-56 190.1 0.0 7.2e-56 189.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|150399283|ref|YP_001323050.1| - 3.1e-09 36.3 0.0 1.1e-08 34.5 0.0 1.7 2 0 0 2 2 2 1 Aminotransferase class-V Alliinase_C PF04864.13 gi|150399283|ref|YP_001323050.1| - 1e-06 27.9 0.1 2e-06 27.0 0.1 1.5 2 0 0 2 2 2 1 Allinase DegT_DnrJ_EryC1 PF01041.17 gi|150399283|ref|YP_001323050.1| - 2.5e-06 27.0 0.4 4.8e-06 26.1 0.4 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|150399283|ref|YP_001323050.1| - 3.1e-06 26.0 0.1 4.2e-06 25.6 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme ANF_receptor PF01094.28 gi|150399283|ref|YP_001323050.1| - 0.06 12.4 0.0 0.075 12.1 0.0 1.2 1 0 0 1 1 1 0 Receptor family ligand binding region DUF2100 PF09873.9 gi|150399284|ref|YP_001323051.1| - 1.8e-80 269.9 17.4 2e-80 269.7 17.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2100) Saccharop_dh_N PF04455.12 gi|150399285|ref|YP_001323052.1| - 1.8e-37 127.7 0.1 4.4e-37 126.5 0.1 1.7 1 0 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region MitMem_reg PF13012.6 gi|150399285|ref|YP_001323052.1| - 0.075 13.5 0.2 16 6.0 0.1 2.6 2 0 0 2 2 2 0 Maintenance of mitochondrial structure and function Helicase_C_2 PF13307.6 gi|150399286|ref|YP_001323053.1| - 1.1e-24 87.5 0.0 3.2e-24 86.0 0.0 1.8 2 0 0 2 2 2 1 Helicase C-terminal domain ResIII PF04851.15 gi|150399286|ref|YP_001323053.1| - 7.1e-11 42.4 0.2 3.3e-10 40.2 0.2 2.2 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|150399286|ref|YP_001323053.1| - 2.8e-09 37.0 1.2 8.8e-07 28.9 0.0 3.3 3 1 1 4 4 4 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|150399286|ref|YP_001323053.1| - 6.4e-08 32.9 0.0 0.00012 22.4 0.0 3.0 2 0 0 2 2 2 2 Helicase conserved C-terminal domain AAA_22 PF13401.6 gi|150399286|ref|YP_001323053.1| - 0.014 15.7 0.0 6.9 7.0 0.0 2.6 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|150399286|ref|YP_001323053.1| - 0.017 14.2 0.0 0.035 13.2 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein SecA_DEAD PF07517.14 gi|150399286|ref|YP_001323053.1| - 0.021 14.1 0.1 0.11 11.8 0.1 2.2 2 1 0 2 2 2 0 SecA DEAD-like domain PhoH PF02562.16 gi|150399286|ref|YP_001323053.1| - 0.13 11.7 0.0 0.26 10.7 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein Helicase_RecD PF05127.14 gi|150399286|ref|YP_001323053.1| - 0.13 12.1 0.1 1.6 8.5 0.1 2.3 1 1 0 1 1 1 0 Helicase DEAD_2 PF06733.15 gi|150399286|ref|YP_001323053.1| - 0.35 10.5 11.7 0.068 12.8 7.2 2.3 2 1 0 2 2 2 0 DEAD_2 Phosphorylase PF00343.20 gi|150399287|ref|YP_001323054.1| - 3.8e-17 61.8 1.2 9e-12 44.1 0.0 3.3 2 1 1 3 3 3 3 Carbohydrate phosphorylase DUF3417 PF11897.8 gi|150399287|ref|YP_001323054.1| - 0.27 11.7 3.5 1.6 9.3 0.0 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF3417) Methyltransf_25 PF13649.6 gi|150399288|ref|YP_001323055.1| - 5.5e-09 36.6 0.0 8.1e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|150399288|ref|YP_001323055.1| - 1.5e-07 31.1 1.9 7e-07 28.9 0.0 2.1 1 1 1 2 2 2 1 Putative methyltransferase Methyltransf_31 PF13847.6 gi|150399288|ref|YP_001323055.1| - 2e-07 30.9 0.6 3.1e-07 30.3 0.7 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|150399288|ref|YP_001323055.1| - 6.5e-07 29.1 1.5 8.1e-07 28.8 0.8 1.4 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_18 PF12847.7 gi|150399288|ref|YP_001323055.1| - 9.9e-07 28.8 0.6 1.3e-06 28.4 0.6 1.1 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|150399288|ref|YP_001323055.1| - 3.3e-06 26.8 0.0 5e-06 26.3 0.0 1.4 1 1 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|150399288|ref|YP_001323055.1| - 4.9e-06 26.2 0.1 9.1e-06 25.3 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|150399288|ref|YP_001323055.1| - 1.5e-05 25.6 0.0 2.7e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|150399288|ref|YP_001323055.1| - 2.9e-05 23.3 0.2 0.00032 19.9 0.0 2.0 1 1 0 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltr_RsmB-F PF01189.17 gi|150399288|ref|YP_001323055.1| - 3.6e-05 23.5 0.1 9.1e-05 22.2 0.0 1.6 1 1 0 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltransf_12 PF08242.12 gi|150399288|ref|YP_001323055.1| - 4e-05 24.3 0.1 7.2e-05 23.5 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|150399288|ref|YP_001323055.1| - 4.4e-05 23.3 0.1 0.00025 20.8 0.0 1.9 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 gi|150399288|ref|YP_001323055.1| - 8e-05 22.2 0.3 0.0002 20.9 0.1 1.5 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.6 gi|150399288|ref|YP_001323055.1| - 0.00083 19.2 0.0 0.00096 19.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|150399288|ref|YP_001323055.1| - 0.00091 18.3 0.1 0.0012 17.9 0.1 1.4 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase CMAS PF02353.20 gi|150399288|ref|YP_001323055.1| - 0.0016 17.8 0.0 0.0021 17.4 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase DREV PF05219.12 gi|150399288|ref|YP_001323055.1| - 0.0028 16.8 0.1 0.0058 15.8 0.1 1.5 1 1 0 1 1 1 1 DREV methyltransferase NodS PF05401.11 gi|150399288|ref|YP_001323055.1| - 0.0032 17.1 0.0 0.0069 16.0 0.0 1.5 1 1 0 1 1 1 1 Nodulation protein S (NodS) DOT1 PF08123.13 gi|150399288|ref|YP_001323055.1| - 0.0043 16.6 0.8 0.0053 16.3 0.8 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 TehB PF03848.14 gi|150399288|ref|YP_001323055.1| - 0.048 13.1 2.6 0.058 12.8 1.8 1.5 1 1 1 2 2 2 0 Tellurite resistance protein TehB UPF0020 PF01170.18 gi|150399288|ref|YP_001323055.1| - 0.087 12.5 0.9 0.21 11.3 0.9 1.8 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 DnaB_2 PF07261.11 gi|150399288|ref|YP_001323055.1| - 0.12 12.2 0.7 2.3 8.0 0.0 2.8 2 1 0 3 3 3 0 Replication initiation and membrane attachment Rad51 PF08423.11 gi|150399289|ref|YP_001323056.1| - 6.5e-80 268.1 0.0 9e-80 267.6 0.0 1.2 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|150399289|ref|YP_001323056.1| - 1.7e-13 50.9 0.5 4.9e-13 49.5 0.5 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain RecA PF00154.21 gi|150399289|ref|YP_001323056.1| - 4.4e-09 36.2 0.2 1.5e-07 31.2 0.2 2.1 1 1 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|150399289|ref|YP_001323056.1| - 6.9e-08 32.3 0.0 1.1e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|150399289|ref|YP_001323056.1| - 2.1e-07 30.5 0.1 5.6e-06 25.9 0.1 2.4 1 1 0 1 1 1 1 KaiC HHH PF00633.23 gi|150399289|ref|YP_001323056.1| - 7.7e-06 25.5 0.7 0.0033 17.2 0.1 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|150399289|ref|YP_001323056.1| - 0.00032 20.9 0.0 0.7 10.2 0.0 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|150399289|ref|YP_001323056.1| - 0.0017 18.1 0.0 0.013 15.3 0.0 2.6 3 1 1 4 4 3 1 Fingers domain of DNA polymerase lambda IMS_HHH PF11798.8 gi|150399289|ref|YP_001323056.1| - 0.0021 18.3 0.4 0.028 14.8 0.0 2.8 3 0 0 3 3 3 1 IMS family HHH motif Cdd1 PF11731.8 gi|150399289|ref|YP_001323056.1| - 0.0044 17.2 0.0 0.05 13.9 0.0 2.4 1 1 1 2 2 2 1 Pathogenicity locus HHH_2 PF12826.7 gi|150399289|ref|YP_001323056.1| - 0.006 16.7 0.1 0.019 15.0 0.1 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif DnaB_C PF03796.15 gi|150399289|ref|YP_001323056.1| - 0.014 14.8 0.1 0.3 10.4 0.1 2.1 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain HHH_8 PF14716.6 gi|150399289|ref|YP_001323056.1| - 0.014 15.8 0.1 0.59 10.5 0.0 2.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain CobU PF02283.16 gi|150399289|ref|YP_001323056.1| - 0.022 14.3 0.0 0.14 11.7 0.0 2.1 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase 5_3_exonuc PF01367.20 gi|150399289|ref|YP_001323056.1| - 0.027 15.0 0.4 14 6.4 0.0 3.1 2 1 1 3 3 3 0 5'-3' exonuclease, C-terminal SAM fold PAXNEB PF05625.11 gi|150399289|ref|YP_001323056.1| - 0.042 13.0 0.0 0.46 9.6 0.0 2.0 2 0 0 2 2 2 0 PAXNEB protein AAA_33 PF13671.6 gi|150399289|ref|YP_001323056.1| - 0.054 13.7 0.0 0.14 12.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain Transposase_20 PF02371.16 gi|150399289|ref|YP_001323056.1| - 0.091 13.1 0.0 23 5.4 0.0 2.5 2 0 0 2 2 2 0 Transposase IS116/IS110/IS902 family DUF2114 PF09887.9 gi|150399290|ref|YP_001323057.1| - 1.7e-218 725.6 5.6 1.9e-218 725.4 5.6 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) FAD_binding_3 PF01494.19 gi|150399291|ref|YP_001323058.1| - 2.1e-10 40.4 0.0 9.8e-09 34.9 0.0 2.6 1 1 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 gi|150399291|ref|YP_001323058.1| - 4.7e-06 25.9 0.0 0.0029 16.7 0.0 2.3 2 1 0 2 2 2 2 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|150399291|ref|YP_001323058.1| - 0.00012 21.1 0.0 0.03 13.2 0.0 2.2 2 0 0 2 2 2 2 Tryptophan halogenase HI0933_like PF03486.14 gi|150399291|ref|YP_001323058.1| - 0.00019 20.3 0.2 0.00032 19.5 0.2 1.4 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.17 gi|150399291|ref|YP_001323058.1| - 0.0027 17.0 0.1 0.005 16.1 0.1 1.4 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.6 gi|150399291|ref|YP_001323058.1| - 0.064 13.5 0.0 0.14 12.4 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|150399291|ref|YP_001323058.1| - 0.18 11.3 0.1 1.4 8.5 0.2 2.0 2 0 0 2 2 2 0 FAD dependent oxidoreductase TP_methylase PF00590.20 gi|150399292|ref|YP_001323059.1| - 4.2e-28 98.7 0.0 5.5e-28 98.4 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TFIID_NTD2 PF04494.15 gi|150399292|ref|YP_001323059.1| - 0.49 10.6 3.1 2 8.6 0.3 2.2 2 0 0 2 2 2 0 WD40 associated region in TFIID subunit, NTD2 domain FUN14 PF04930.15 gi|150399294|ref|YP_001323061.1| - 2.7e-07 30.9 10.8 3.7e-07 30.5 10.8 1.2 1 0 0 1 1 1 1 FUN14 family NTP_transf_2 PF01909.23 gi|150399295|ref|YP_001323062.1| - 0.00011 22.4 0.0 0.00036 20.8 0.0 1.9 1 0 0 1 1 1 1 Nucleotidyltransferase domain BLOC1_2 PF10046.9 gi|150399295|ref|YP_001323062.1| - 0.076 13.3 2.6 0.094 13.0 0.5 2.1 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Profilin PF00235.19 gi|150399295|ref|YP_001323062.1| - 0.11 12.8 0.2 4.6 7.5 0.0 2.3 2 0 0 2 2 2 0 Profilin QRPTase_C PF01729.19 gi|150399296|ref|YP_001323063.1| - 3.1e-32 111.7 0.7 4.4e-32 111.2 0.7 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|150399296|ref|YP_001323063.1| - 7.2e-18 64.4 0.0 1e-16 60.7 0.0 2.2 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain His_biosynth PF00977.21 gi|150399296|ref|YP_001323063.1| - 0.00067 19.2 0.5 0.0014 18.2 0.2 1.6 2 0 0 2 2 2 1 Histidine biosynthesis protein Ribul_P_3_epim PF00834.19 gi|150399296|ref|YP_001323063.1| - 0.00085 18.8 0.1 0.0015 18.0 0.1 1.4 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family PRAI PF00697.22 gi|150399296|ref|YP_001323063.1| - 0.0062 16.3 0.3 0.47 10.2 0.1 2.4 1 1 1 2 2 2 2 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TMP-TENI PF02581.17 gi|150399296|ref|YP_001323063.1| - 0.02 14.2 0.1 0.048 13.0 0.1 1.8 1 1 0 1 1 1 0 Thiamine monophosphate synthase pEK499_p136 PF18736.1 gi|150399297|ref|YP_001323064.1| - 0.036 13.7 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 HEPN pEK499 p136 PAPS_reduct PF01507.19 gi|150399298|ref|YP_001323065.1| - 9.2e-09 35.6 0.1 1.4e-08 35.0 0.1 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ThiI PF02568.14 gi|150399298|ref|YP_001323065.1| - 1.6e-07 31.1 0.2 1.7e-06 27.8 0.0 2.5 3 0 0 3 3 3 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|150399298|ref|YP_001323065.1| - 5.7e-06 26.0 0.0 2.1e-05 24.1 0.0 2.1 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|150399298|ref|YP_001323065.1| - 9e-06 25.0 0.1 1.3e-05 24.4 0.1 1.3 1 0 0 1 1 1 1 NAD synthase ATP_bind_3 PF01171.20 gi|150399298|ref|YP_001323065.1| - 0.00021 21.1 0.1 0.00033 20.5 0.1 1.3 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.16 gi|150399298|ref|YP_001323065.1| - 0.0045 15.8 0.3 0.0093 14.8 0.2 1.6 1 1 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.21 gi|150399298|ref|YP_001323065.1| - 0.021 14.5 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase FdhD-NarQ PF02634.15 gi|150399299|ref|YP_001323066.1| - 1.5e-48 165.5 0.0 5.7e-43 147.3 0.0 2.0 1 1 1 2 2 2 2 FdhD/NarQ family ThiF PF00899.21 gi|150399300|ref|YP_001323067.1| - 8e-58 195.7 0.0 9.7e-58 195.4 0.0 1.0 1 0 0 1 1 1 1 ThiF family UDPG_MGDP_dh_N PF03721.14 gi|150399300|ref|YP_001323067.1| - 0.017 14.7 1.9 0.061 12.9 1.9 1.8 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|150399300|ref|YP_001323067.1| - 0.022 15.0 1.3 0.062 13.6 1.3 1.7 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|150399300|ref|YP_001323067.1| - 0.037 13.4 0.0 0.054 12.8 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.16 gi|150399300|ref|YP_001323067.1| - 0.043 13.5 0.0 0.062 13.0 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA PglD_N PF17836.1 gi|150399300|ref|YP_001323067.1| - 0.052 14.2 1.5 1.1 10.0 0.9 2.5 2 1 0 2 2 2 0 PglD N-terminal domain Shikimate_DH PF01488.20 gi|150399300|ref|YP_001323067.1| - 0.054 13.6 1.0 0.25 11.4 0.4 2.1 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase Ldh_1_N PF00056.23 gi|150399300|ref|YP_001323067.1| - 0.11 12.6 1.6 0.39 10.8 1.6 1.9 1 1 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain MoaE PF02391.17 gi|150399301|ref|YP_001323068.1| - 1.2e-30 106.1 0.0 1.4e-30 105.9 0.0 1.0 1 0 0 1 1 1 1 MoaE protein ApbE PF02424.15 gi|150399302|ref|YP_001323069.1| - 0.16 11.4 2.6 6.5 6.2 2.6 2.1 1 1 0 1 1 1 0 ApbE family DUF2534 PF10749.9 gi|150399303|ref|YP_001323070.1| - 0.11 12.7 0.3 0.14 12.3 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2534) BATS PF06968.13 gi|150399304|ref|YP_001323071.1| - 2.3e-15 56.5 0.1 5.8e-15 55.2 0.1 1.7 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 gi|150399304|ref|YP_001323071.1| - 9e-14 52.2 0.4 4.1e-13 50.0 0.2 2.0 1 1 1 2 2 2 1 Radical SAM superfamily DpaA_N PF16924.5 gi|150399304|ref|YP_001323071.1| - 0.031 14.4 1.4 0.53 10.4 0.6 2.8 2 1 0 2 2 2 0 Dipicolinate synthase subunit A N-terminal domain NAD_synthase PF02540.17 gi|150399305|ref|YP_001323072.1| - 2.5e-06 26.8 1.2 3.5e-06 26.3 0.1 1.8 3 0 0 3 3 3 1 NAD synthase ATP_bind_3 PF01171.20 gi|150399305|ref|YP_001323072.1| - 0.0026 17.5 0.7 0.0066 16.2 0.0 1.9 2 1 0 2 2 2 1 PP-loop family QueC PF06508.13 gi|150399305|ref|YP_001323072.1| - 0.0036 16.8 0.2 0.014 14.9 0.1 2.0 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|150399305|ref|YP_001323072.1| - 0.16 11.6 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase SepSecS PF05889.13 gi|150399306|ref|YP_001323073.1| - 9.3e-33 113.5 0.0 1.4e-32 112.9 0.0 1.2 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_5 PF00266.19 gi|150399306|ref|YP_001323073.1| - 1e-15 57.6 0.0 1.3e-15 57.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|150399306|ref|YP_001323073.1| - 3.6e-06 26.4 0.0 4.5e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|150399306|ref|YP_001323073.1| - 3.8e-05 23.2 0.0 4.9e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 gi|150399306|ref|YP_001323073.1| - 5.7e-05 22.0 0.0 8.2e-05 21.5 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Beta_elim_lyase PF01212.21 gi|150399306|ref|YP_001323073.1| - 0.0072 15.6 0.0 0.0099 15.2 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase CNRIP1 PF15043.6 gi|150399307|ref|YP_001323074.1| - 0.014 14.9 0.3 0.017 14.6 0.3 1.1 1 0 0 1 1 1 0 CB1 cannabinoid receptor-interacting protein 1 NadA PF02445.16 gi|150399308|ref|YP_001323075.1| - 2e-105 352.2 3.6 2.3e-105 352.0 3.6 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein Asparaginase PF00710.20 gi|150399308|ref|YP_001323075.1| - 0.0053 16.3 0.0 0.013 15.1 0.0 1.6 1 0 0 1 1 1 1 Asparaginase, N-terminal SRP54_N PF02881.19 gi|150399308|ref|YP_001323075.1| - 0.41 10.9 2.9 0.73 10.1 0.2 2.4 2 0 0 2 2 2 0 SRP54-type protein, helical bundle domain ThiF PF00899.21 gi|150399309|ref|YP_001323076.1| - 2e-09 37.2 0.2 2.3e-09 37.0 0.2 1.1 1 0 0 1 1 1 1 ThiF family Thioredoxin_6 PF13848.6 gi|150399309|ref|YP_001323076.1| - 0.028 14.3 0.1 0.035 14.0 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Fer4 PF00037.27 gi|150399310|ref|YP_001323077.1| - 1.3e-12 47.0 13.4 1.7e-08 33.9 1.6 2.8 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399310|ref|YP_001323077.1| - 2e-08 34.0 13.1 2.6e-05 24.1 1.9 2.5 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399310|ref|YP_001323077.1| - 3.8e-08 33.3 5.8 0.00035 20.6 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399310|ref|YP_001323077.1| - 4.1e-07 30.5 8.8 1.9e-05 25.1 9.4 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399310|ref|YP_001323077.1| - 4.9e-07 29.8 8.6 7.5e-07 29.2 8.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399310|ref|YP_001323077.1| - 5.2e-07 29.7 12.3 8.2e-07 29.1 12.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399310|ref|YP_001323077.1| - 2.7e-06 27.1 10.6 0.003 17.5 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399310|ref|YP_001323077.1| - 0.0001 22.8 5.2 0.12 12.9 0.8 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150399310|ref|YP_001323077.1| - 0.00022 21.9 8.6 0.039 14.7 1.1 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_16 PF13484.6 gi|150399310|ref|YP_001323077.1| - 0.0017 19.3 6.8 0.029 15.3 1.8 2.4 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain HTH_3 PF01381.22 gi|150399310|ref|YP_001323077.1| - 0.0028 17.7 0.0 0.0055 16.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|150399310|ref|YP_001323077.1| - 0.0033 17.4 0.0 0.0062 16.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Fer4_13 PF13370.6 gi|150399310|ref|YP_001323077.1| - 0.017 15.6 12.2 0.66 10.6 2.5 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I HTH_23 PF13384.6 gi|150399310|ref|YP_001323077.1| - 0.017 14.9 0.0 0.037 13.8 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain Fer4_22 PF17179.4 gi|150399310|ref|YP_001323077.1| - 0.037 14.9 6.9 0.47 11.3 0.4 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain HTH_38 PF13936.6 gi|150399310|ref|YP_001323077.1| - 0.048 13.4 0.0 0.086 12.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Fer4_4 PF12800.7 gi|150399310|ref|YP_001323077.1| - 0.062 13.8 3.4 0.062 13.8 3.4 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_19 PF06902.11 gi|150399310|ref|YP_001323077.1| - 0.11 12.6 4.3 0.19 11.8 4.3 1.4 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_8 PF13183.6 gi|150399310|ref|YP_001323077.1| - 0.3 11.6 14.3 1.3 9.5 3.7 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399311|ref|YP_001323078.1| - 1.6e-49 163.8 94.9 5.3e-08 32.4 3.8 8.4 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399311|ref|YP_001323078.1| - 9.7e-37 125.3 67.3 2.2e-10 40.9 8.9 5.3 3 2 3 6 6 6 6 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399311|ref|YP_001323078.1| - 2.4e-30 105.2 66.6 0.00043 21.1 1.0 8.2 7 1 1 8 8 8 8 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|150399311|ref|YP_001323078.1| - 6.4e-26 90.3 74.7 3.2e-07 30.4 9.2 6.3 4 1 4 8 8 8 8 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399311|ref|YP_001323078.1| - 2.8e-25 87.3 97.2 0.00053 20.0 5.5 8.5 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399311|ref|YP_001323078.1| - 3.6e-24 84.7 71.7 1.8e-06 28.0 10.2 6.1 1 1 7 8 8 8 8 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399311|ref|YP_001323078.1| - 6.4e-24 83.8 78.2 3.7e-06 26.9 15.7 7.1 3 2 4 7 7 7 7 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399311|ref|YP_001323078.1| - 2.7e-21 74.3 79.7 0.00057 19.8 2.4 8.5 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399311|ref|YP_001323078.1| - 1.3e-13 51.2 71.0 0.001 19.5 10.3 6.6 4 2 2 6 6 6 6 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399311|ref|YP_001323078.1| - 4.4e-09 36.1 90.1 0.066 13.7 1.9 8.5 8 1 0 8 8 8 7 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399311|ref|YP_001323078.1| - 2e-08 34.6 79.4 0.016 15.7 14.4 7.2 3 3 5 8 8 8 7 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150399311|ref|YP_001323078.1| - 0.0055 17.5 70.7 0.11 13.4 1.4 8.1 5 2 5 10 10 10 4 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399311|ref|YP_001323078.1| - 0.011 16.6 5.4 0.011 16.6 5.4 8.6 9 0 0 9 9 8 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|150399311|ref|YP_001323078.1| - 0.031 15.0 66.6 1.2 9.9 1.4 9.5 8 2 0 8 8 8 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|150399311|ref|YP_001323078.1| - 1.5 9.4 88.2 0.3 11.7 3.5 8.5 7 1 0 7 7 7 0 4Fe-4S single cluster domain of Ferredoxin I Fer4 PF00037.27 gi|150399312|ref|YP_001323079.1| - 4.5e-18 64.2 16.6 4.8e-09 35.7 4.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399312|ref|YP_001323079.1| - 1.9e-15 57.2 33.9 2e-09 37.9 12.2 1.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399312|ref|YP_001323079.1| - 3e-12 46.0 14.6 3.8e-06 26.7 3.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399312|ref|YP_001323079.1| - 9e-12 44.9 21.5 5.6e-09 36.0 11.3 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399312|ref|YP_001323079.1| - 7.3e-11 42.1 6.4 1.1e-10 41.6 6.4 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399312|ref|YP_001323079.1| - 5.3e-10 40.1 8.9 6.5e-05 23.8 2.1 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|150399312|ref|YP_001323079.1| - 9.7e-09 35.2 10.3 0.00011 22.2 1.1 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399312|ref|YP_001323079.1| - 2.5e-08 33.5 13.7 0.00034 20.6 2.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|150399312|ref|YP_001323079.1| - 2.3e-06 28.2 23.4 0.0037 18.1 9.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|150399312|ref|YP_001323079.1| - 7.1e-06 26.8 6.1 0.0078 17.0 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399312|ref|YP_001323079.1| - 9.4e-06 26.0 12.1 4.4e-05 23.9 12.2 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399312|ref|YP_001323079.1| - 1e-05 25.7 13.5 0.0015 18.9 2.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399312|ref|YP_001323079.1| - 3.9e-05 24.1 21.1 0.00027 21.4 10.1 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150399312|ref|YP_001323079.1| - 0.00043 21.0 10.4 0.069 13.9 0.2 3.0 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|150399312|ref|YP_001323079.1| - 0.0087 16.6 12.5 0.52 10.9 1.7 2.7 2 1 1 3 3 3 3 4Fe-4S single cluster domain of Ferredoxin I MTHFR_C PF12225.8 gi|150399312|ref|YP_001323079.1| - 0.042 13.5 4.7 0.32 10.7 0.6 2.1 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal Fer4_11 PF13247.6 gi|150399312|ref|YP_001323079.1| - 0.059 13.5 3.8 0.35 11.0 3.8 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain SH3_4 PF06347.13 gi|150399312|ref|YP_001323079.1| - 0.092 12.6 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial SH3 domain Fer4_18 PF13746.6 gi|150399312|ref|YP_001323079.1| - 3 8.1 11.8 2.6 8.3 1.1 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Molydop_binding PF01568.21 gi|150399313|ref|YP_001323080.1| - 4.7e-19 68.4 0.0 5.7e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain SH3_2 PF07653.17 gi|150399313|ref|YP_001323080.1| - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Variant SH3 domain Amidohydro_3 PF07969.11 gi|150399314|ref|YP_001323081.1| - 4.5e-77 260.5 0.1 7.2e-77 259.8 0.1 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|150399314|ref|YP_001323081.1| - 9.1e-07 28.5 0.0 0.00051 19.5 0.0 2.5 3 0 0 3 3 3 2 Amidohydrolase family GXGXG PF01493.19 gi|150399315|ref|YP_001323082.1| - 4e-08 33.1 24.9 0.002 17.8 9.6 2.9 1 1 0 1 1 1 1 GXGXG motif PTPS PF01242.19 gi|150399316|ref|YP_001323083.1| - 1.5e-25 89.5 0.0 1.8e-25 89.3 0.0 1.1 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase CBS PF00571.28 gi|150399317|ref|YP_001323084.1| - 2.3e-27 95.2 3.8 8.1e-13 48.6 0.3 2.3 2 0 0 2 2 2 2 CBS domain zf-RRN7 PF11781.8 gi|150399317|ref|YP_001323084.1| - 0.012 15.2 0.9 0.02 14.6 0.9 1.3 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DisA_N PF02457.16 gi|150399317|ref|YP_001323084.1| - 0.028 14.0 0.0 0.047 13.3 0.0 1.3 1 0 0 1 1 1 0 DisA bacterial checkpoint controller nucleotide-binding C1_2 PF03107.16 gi|150399317|ref|YP_001323084.1| - 0.25 11.7 2.4 0.41 11.0 2.4 1.3 1 0 0 1 1 1 0 C1 domain Gin PF10764.9 gi|150399317|ref|YP_001323084.1| - 1.7 8.7 8.1 1.5 8.8 4.1 2.5 2 1 0 2 2 2 0 Inhibitor of sigma-G Gin CBS PF00571.28 gi|150399318|ref|YP_001323085.1| - 7.4e-51 170.4 15.0 1.5e-12 47.7 0.1 4.1 4 0 0 4 4 4 4 CBS domain Peptidase_S51 PF03575.17 gi|150399318|ref|YP_001323085.1| - 0.11 12.1 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Peptidase family S51 DUF89 PF01937.19 gi|150399319|ref|YP_001323086.1| - 7.3e-59 199.5 0.4 8.3e-59 199.3 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 SRP54 PF00448.22 gi|150399319|ref|YP_001323086.1| - 0.013 15.2 0.3 0.024 14.3 0.3 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain TA0956 PF11513.8 gi|150399319|ref|YP_001323086.1| - 0.059 13.6 0.1 0.22 11.8 0.0 2.0 2 0 0 2 2 2 0 Thermoplasma acidophilum protein TA0956 AIRS_C PF02769.22 gi|150399320|ref|YP_001323087.1| - 2e-27 96.2 0.0 4.1e-27 95.2 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|150399320|ref|YP_001323087.1| - 1.5e-13 51.2 0.2 2.7e-13 50.4 0.2 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Biotin_lipoyl_2 PF13533.6 gi|150399320|ref|YP_001323087.1| - 0.065 13.1 0.1 0.13 12.1 0.1 1.5 1 0 0 1 1 1 0 Biotin-lipoyl like tRNA_synthFbeta PF17759.1 gi|150399321|ref|YP_001323088.1| - 1.1e-39 136.1 0.0 1.7e-39 135.5 0.0 1.2 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B3_4 PF03483.17 gi|150399321|ref|YP_001323088.1| - 2e-15 56.9 0.0 3.5e-15 56.1 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain B5 PF03484.15 gi|150399321|ref|YP_001323088.1| - 3.1e-15 56.2 0.8 4.1e-14 52.6 0.1 3.0 4 0 0 4 4 4 1 tRNA synthetase B5 domain PhetRS_B1 PF18262.1 gi|150399321|ref|YP_001323088.1| - 6.9e-13 48.6 1.5 3.6e-09 36.7 0.1 3.2 3 0 0 3 3 3 2 Phe-tRNA synthetase beta subunit B1 domain tRNA-synt_2d PF01409.20 gi|150399321|ref|YP_001323088.1| - 9.5e-08 31.8 0.1 1.8e-07 30.9 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) DUF2067 PF09840.9 gi|150399321|ref|YP_001323088.1| - 0.065 12.8 1.8 0.091 12.3 0.5 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2067) DUF4822 PF16103.5 gi|150399322|ref|YP_001323089.1| - 0.048 13.9 0.1 0.073 13.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4822) DUF3783 PF12646.7 gi|150399322|ref|YP_001323089.1| - 0.11 12.5 0.6 0.2 11.6 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3783) ALAD PF00490.21 gi|150399323|ref|YP_001323090.1| - 1.9e-144 480.7 0.0 2.1e-144 480.5 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Pyr_redox_2 PF07992.14 gi|150399324|ref|YP_001323091.1| - 2.6e-59 200.8 6.9 2.6e-59 200.8 6.9 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|150399324|ref|YP_001323091.1| - 1.7e-24 86.1 5.7 1.5e-19 70.3 0.8 3.5 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|150399324|ref|YP_001323091.1| - 8e-22 77.6 0.3 1.9e-20 73.2 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|150399324|ref|YP_001323091.1| - 2.2e-11 43.6 11.9 8.5e-09 35.1 7.4 3.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|150399324|ref|YP_001323091.1| - 2.5e-07 30.8 0.0 0.0097 16.1 0.0 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|150399324|ref|YP_001323091.1| - 2.8e-06 26.3 9.5 0.29 9.8 0.0 4.6 4 1 1 5 5 5 3 HI0933-like protein DAO PF01266.24 gi|150399324|ref|YP_001323091.1| - 9e-06 25.5 7.5 1 8.9 0.0 4.1 3 1 1 4 4 4 2 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|150399324|ref|YP_001323091.1| - 6.3e-05 23.4 1.7 0.2 12.1 0.1 2.7 2 0 0 2 2 2 2 Putative NAD(P)-binding Thi4 PF01946.17 gi|150399324|ref|YP_001323091.1| - 0.0002 20.7 3.5 0.0099 15.1 0.1 2.9 3 0 0 3 3 3 1 Thi4 family FAD_binding_2 PF00890.24 gi|150399324|ref|YP_001323091.1| - 0.00026 20.2 5.0 0.077 12.1 0.0 3.5 4 0 0 4 4 4 2 FAD binding domain FAD_binding_3 PF01494.19 gi|150399324|ref|YP_001323091.1| - 0.0033 16.7 0.5 0.49 9.6 0.1 2.5 2 0 0 2 2 2 1 FAD binding domain K_oxygenase PF13434.6 gi|150399324|ref|YP_001323091.1| - 0.009 15.2 0.1 0.1 11.7 0.0 2.1 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) TrkA_N PF02254.18 gi|150399324|ref|YP_001323091.1| - 0.0091 16.2 0.4 0.39 11.0 0.1 2.8 2 0 0 2 2 2 1 TrkA-N domain Lycopene_cycl PF05834.12 gi|150399324|ref|YP_001323091.1| - 0.01 14.9 1.3 2.2 7.3 0.3 2.8 3 0 0 3 3 3 0 Lycopene cyclase protein ApbA PF02558.16 gi|150399324|ref|YP_001323091.1| - 0.013 15.2 0.8 3.2 7.4 0.2 2.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA IlvN PF07991.12 gi|150399324|ref|YP_001323091.1| - 0.029 13.9 1.1 3.4 7.2 0.1 2.7 3 0 0 3 3 3 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain PK_C PF02887.16 gi|150399324|ref|YP_001323091.1| - 0.069 13.4 0.6 0.25 11.6 0.4 2.1 1 1 0 1 1 1 0 Pyruvate kinase, alpha/beta domain 2-Hacid_dh_C PF02826.19 gi|150399324|ref|YP_001323091.1| - 0.098 12.0 0.6 0.49 9.7 0.0 2.3 3 0 0 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|150399324|ref|YP_001323091.1| - 0.37 10.8 0.1 0.37 10.8 0.1 2.7 3 1 0 3 3 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Trp_halogenase PF04820.14 gi|150399324|ref|YP_001323091.1| - 0.45 9.3 4.5 1.6 7.5 0.1 2.6 3 0 0 3 3 3 0 Tryptophan halogenase GARS_N PF02844.15 gi|150399324|ref|YP_001323091.1| - 0.67 10.8 3.3 2.7 8.8 0.2 3.0 2 1 0 3 3 2 0 Phosphoribosylglycinamide synthetase, N domain NMT1_2 PF13379.6 gi|150399325|ref|YP_001323092.1| - 1.8e-26 93.4 0.1 4.7e-26 92.0 0.1 1.6 1 1 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 gi|150399325|ref|YP_001323092.1| - 1.7e-06 28.1 0.0 8.9e-06 25.8 0.0 2.0 1 1 0 1 1 1 1 NMT1/THI5 like zf-ribbon_3 PF13248.6 gi|150399326|ref|YP_001323093.1| - 1.2e-19 69.0 20.1 2.1e-07 30.1 0.5 3.2 3 0 0 3 3 3 3 zinc-ribbon domain DZR PF12773.7 gi|150399326|ref|YP_001323093.1| - 6.2e-18 64.6 38.7 1.4e-08 34.6 9.6 2.2 1 1 2 3 3 3 3 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|150399326|ref|YP_001323093.1| - 3.8e-10 40.4 13.9 0.0067 17.2 0.8 3.2 3 0 0 3 3 3 3 zinc-ribbon family zinc_ribbon_2 PF13240.6 gi|150399326|ref|YP_001323093.1| - 6.3e-09 35.3 20.1 6.9e-05 22.4 0.2 3.4 3 0 0 3 3 3 3 zinc-ribbon domain UPF0547 PF10571.9 gi|150399326|ref|YP_001323093.1| - 4.3e-06 26.7 9.6 0.0088 16.1 0.9 3.3 3 0 0 3 3 3 2 Uncharacterised protein family UPF0547 TackOD1 PF18551.1 gi|150399326|ref|YP_001323093.1| - 0.0023 17.6 16.3 0.018 14.7 0.3 2.4 1 1 1 2 2 2 2 Thaumarchaeal output domain 1 OrfB_Zn_ribbon PF07282.11 gi|150399326|ref|YP_001323093.1| - 0.044 13.7 18.1 0.18 11.8 1.6 4.2 2 1 2 4 4 4 0 Putative transposase DNA-binding domain C1_1 PF00130.22 gi|150399326|ref|YP_001323093.1| - 0.058 13.3 20.8 0.28 11.1 9.7 3.6 1 1 2 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn-ribbon_8 PF09723.10 gi|150399326|ref|YP_001323093.1| - 0.18 11.9 17.4 0.23 11.6 1.7 4.2 3 1 1 4 4 4 0 Zinc ribbon domain RecO_C PF02565.15 gi|150399326|ref|YP_001323093.1| - 0.32 10.8 4.3 1.8 8.3 0.4 2.3 1 1 1 2 2 2 0 Recombination protein O C terminal Auto_anti-p27 PF06677.12 gi|150399326|ref|YP_001323093.1| - 0.53 10.5 16.5 2.6 8.3 0.4 4.1 4 0 0 4 4 4 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C2HC5 PF06221.13 gi|150399326|ref|YP_001323093.1| - 0.87 9.6 19.4 3.3 7.8 2.1 3.9 1 1 2 3 3 3 0 Putative zinc finger motif, C2HC5-type zf-CHCC PF10276.9 gi|150399326|ref|YP_001323093.1| - 1.1 9.3 0.1 1.1 9.3 0.1 3.7 4 0 0 4 4 4 0 Zinc-finger domain zf-C3HC4_3 PF13920.6 gi|150399326|ref|YP_001323093.1| - 1.5 8.7 20.9 0.39 10.6 1.7 3.8 2 2 2 4 4 4 0 Zinc finger, C3HC4 type (RING finger) zf-NADH-PPase PF09297.11 gi|150399326|ref|YP_001323093.1| - 6.9 6.4 16.1 9.4 6.0 0.2 4.6 4 2 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain DUF1451 PF07295.11 gi|150399326|ref|YP_001323093.1| - 7.1 6.7 17.0 1.4 8.9 2.9 3.1 3 1 1 4 4 4 0 Zinc-ribbon containing domain Zn_Tnp_IS91 PF14319.6 gi|150399326|ref|YP_001323093.1| - 7.2 6.7 18.4 1.6 8.8 10.3 2.7 1 1 1 2 2 2 0 Transposase zinc-binding domain CxxCxxCC PF03692.15 gi|150399328|ref|YP_001323095.1| - 2e-10 41.2 6.4 2e-10 41.2 6.4 2.3 2 1 0 2 2 2 1 Putative zinc- or iron-chelating domain DUF87 PF01935.17 gi|150399329|ref|YP_001323096.1| - 6.3e-46 157.3 6.7 1e-45 156.6 6.7 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain HAS-barrel PF09378.10 gi|150399329|ref|YP_001323096.1| - 1.6e-10 41.0 0.5 5.4e-10 39.3 0.2 2.1 2 0 0 2 2 2 1 HAS barrel domain DUF853 PF05872.12 gi|150399329|ref|YP_001323096.1| - 7.5e-09 34.7 0.0 3.5e-05 22.6 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) Zot PF05707.12 gi|150399329|ref|YP_001323096.1| - 0.00055 19.6 0.0 0.0021 17.7 0.0 1.9 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_10 PF12846.7 gi|150399329|ref|YP_001323096.1| - 0.0023 16.9 0.6 0.57 9.0 0.6 2.5 1 1 0 1 1 1 1 AAA-like domain TrwB_AAD_bind PF10412.9 gi|150399329|ref|YP_001323096.1| - 0.0044 16.0 0.0 0.015 14.3 0.0 1.7 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_19 PF13245.6 gi|150399329|ref|YP_001323096.1| - 0.0088 16.4 0.1 7 7.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain GatB_N PF02934.15 gi|150399330|ref|YP_001323097.1| - 7.3e-71 238.7 0.1 1e-70 238.2 0.1 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|150399330|ref|YP_001323097.1| - 1e-22 80.6 3.1 1e-22 80.6 3.1 2.2 2 0 0 2 2 2 1 GatB domain GAD PF02938.14 gi|150399330|ref|YP_001323097.1| - 8.6e-22 77.2 0.1 2.5e-21 75.7 0.1 1.9 1 0 0 1 1 1 1 GAD domain YqeY PF09424.10 gi|150399330|ref|YP_001323097.1| - 0.00012 22.2 0.5 0.00045 20.3 0.5 2.0 1 0 0 1 1 1 1 Yqey-like protein DUF4890 PF16231.5 gi|150399330|ref|YP_001323097.1| - 0.029 14.8 0.3 0.08 13.4 0.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4890) Activator-TraM PF11657.8 gi|150399330|ref|YP_001323097.1| - 0.12 12.3 1.2 0.38 10.6 0.2 2.3 2 0 0 2 2 2 0 Transcriptional activator TraM Asparaginase PF00710.20 gi|150399331|ref|YP_001323098.1| - 8.6e-61 204.8 0.3 1.7e-60 203.9 0.3 1.5 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|150399331|ref|YP_001323098.1| - 8e-26 90.5 0.0 1.9e-24 86.1 0.0 2.3 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|150399331|ref|YP_001323098.1| - 1.2e-16 59.7 2.4 2.9e-16 58.5 2.4 1.7 1 0 0 1 1 1 1 GatD N-terminal domain DUF4370 PF14290.6 gi|150399331|ref|YP_001323098.1| - 0.013 15.4 0.0 0.022 14.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4370) Bundlin PF05307.11 gi|150399331|ref|YP_001323098.1| - 0.019 14.8 0.2 0.057 13.3 0.0 1.9 2 0 0 2 2 2 0 Bundlin UvrB_inter PF17757.1 gi|150399331|ref|YP_001323098.1| - 0.12 12.5 0.6 22 5.3 0.1 2.5 2 0 0 2 2 2 0 UvrB interaction domain UPF0489 PF12640.7 gi|150399332|ref|YP_001323099.1| - 5.3e-18 65.9 7.6 6.5e-18 65.6 0.6 2.9 2 1 0 2 2 2 1 UPF0489 domain Arginase PF00491.21 gi|150399332|ref|YP_001323099.1| - 0.081 12.4 0.0 0.097 12.1 0.0 1.2 1 0 0 1 1 1 0 Arginase family DUF1786 PF08735.10 gi|150399333|ref|YP_001323100.1| - 8.9e-81 270.9 0.0 1e-80 270.6 0.0 1.0 1 0 0 1 1 1 1 Putative pyruvate format-lyase activating enzyme (DUF1786) RraA-like PF03737.15 gi|150399334|ref|YP_001323101.1| - 7.1e-41 139.9 1.4 1.3e-40 139.0 0.3 1.9 2 0 0 2 2 2 1 Aldolase/RraA OMPdecase PF00215.24 gi|150399334|ref|YP_001323101.1| - 1.1e-21 77.5 1.4 1.2e-20 74.1 1.4 2.3 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PcrB PF01884.17 gi|150399334|ref|YP_001323101.1| - 3e-05 23.6 2.4 6e-05 22.6 0.1 2.5 2 1 2 4 4 4 1 PcrB family HMGL-like PF00682.19 gi|150399334|ref|YP_001323101.1| - 0.00013 21.6 0.2 0.28 10.7 0.0 2.2 2 0 0 2 2 2 2 HMGL-like IMPDH PF00478.25 gi|150399334|ref|YP_001323101.1| - 0.00069 18.7 7.0 0.034 13.2 1.5 3.0 2 1 1 3 3 3 2 IMP dehydrogenase / GMP reductase domain Ribul_P_3_epim PF00834.19 gi|150399334|ref|YP_001323101.1| - 0.0017 17.8 0.6 0.004 16.6 0.6 1.7 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 gi|150399334|ref|YP_001323101.1| - 0.0018 18.1 0.5 0.48 10.2 0.0 3.0 2 1 1 3 3 3 1 Quinolinate phosphoribosyl transferase, C-terminal domain Aldolase PF01081.19 gi|150399334|ref|YP_001323101.1| - 0.0048 16.3 2.9 0.61 9.5 0.3 2.4 1 1 0 2 2 2 2 KDPG and KHG aldolase Response_reg PF00072.24 gi|150399334|ref|YP_001323101.1| - 0.039 14.1 0.3 10 6.3 0.1 2.6 2 0 0 2 2 2 0 Response regulator receiver domain His_biosynth PF00977.21 gi|150399334|ref|YP_001323101.1| - 0.29 10.6 3.8 0.1 12.0 0.6 2.0 2 1 0 2 2 2 0 Histidine biosynthesis protein POR PF01558.18 gi|150399335|ref|YP_001323102.1| - 1.8e-37 129.1 0.0 3.1e-37 128.3 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|150399335|ref|YP_001323102.1| - 8.4e-24 84.1 0.2 1.4e-23 83.3 0.2 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|150399336|ref|YP_001323103.1| - 1.1e-54 185.7 0.0 1.3e-54 185.4 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|150399336|ref|YP_001323103.1| - 7.3e-27 93.7 0.0 1.4e-26 92.8 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|150399336|ref|YP_001323103.1| - 0.00015 21.6 0.0 0.0003 20.6 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fer4_21 PF14697.6 gi|150399337|ref|YP_001323104.1| - 1.3e-08 34.8 5.8 1.7e-08 34.4 5.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399337|ref|YP_001323104.1| - 1.9e-08 34.8 9.3 2.6e-08 34.3 9.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399337|ref|YP_001323104.1| - 6.1e-07 29.0 15.3 0.0013 18.5 3.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399337|ref|YP_001323104.1| - 5.2e-06 26.2 12.0 0.0014 18.6 2.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399337|ref|YP_001323104.1| - 6.4e-06 26.2 22.8 0.00016 21.7 12.8 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399337|ref|YP_001323104.1| - 9.4e-06 25.7 24.6 0.00018 21.6 13.1 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150399337|ref|YP_001323104.1| - 0.00012 22.9 6.3 0.011 16.6 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399337|ref|YP_001323104.1| - 0.00012 22.0 14.4 0.011 15.7 4.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399337|ref|YP_001323104.1| - 0.00079 19.8 13.6 0.0034 17.8 2.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399337|ref|YP_001323104.1| - 0.0013 19.1 7.9 0.014 15.8 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|150399337|ref|YP_001323104.1| - 0.014 16.0 0.9 0.014 16.0 0.9 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|150399337|ref|YP_001323104.1| - 0.017 15.9 5.4 0.26 12.1 0.5 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.6 gi|150399337|ref|YP_001323104.1| - 0.017 16.0 14.1 0.56 11.2 3.5 2.2 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|150399337|ref|YP_001323104.1| - 0.03 14.8 13.0 1.7 9.3 13.0 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399337|ref|YP_001323104.1| - 0.18 12.8 15.6 0.21 12.6 4.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|150399337|ref|YP_001323104.1| - 0.45 10.7 9.7 1.4 9.2 2.3 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Cupin_2 PF07883.11 gi|150399338|ref|YP_001323105.1| - 4.1e-15 55.2 0.0 9.8e-15 54.0 0.0 1.6 2 0 0 2 2 2 1 Cupin domain HTH_19 PF12844.7 gi|150399338|ref|YP_001323105.1| - 1.5e-08 34.5 0.0 3.9e-08 33.2 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|150399338|ref|YP_001323105.1| - 6.7e-06 26.1 0.0 1.4e-05 25.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|150399338|ref|YP_001323105.1| - 6.7e-05 23.1 0.0 0.0001 22.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_3 PF05899.12 gi|150399338|ref|YP_001323105.1| - 0.00049 19.7 0.0 0.00092 18.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 gi|150399338|ref|YP_001323105.1| - 0.00054 19.9 0.0 0.0011 18.9 0.0 1.5 2 0 0 2 2 2 1 AraC-like ligand binding domain FAD_binding_2 PF00890.24 gi|150399339|ref|YP_001323106.1| - 3e-94 316.5 0.0 4e-94 316.1 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|150399339|ref|YP_001323106.1| - 4.7e-20 71.9 0.0 1e-19 70.8 0.0 1.5 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|150399339|ref|YP_001323106.1| - 1.2e-07 31.3 1.8 0.003 16.8 0.0 3.1 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase PMR5N PF14416.6 gi|150399339|ref|YP_001323106.1| - 0.19 12.0 0.1 0.45 10.9 0.1 1.6 1 0 0 1 1 1 0 PMR5 N terminal Domain DUF190 PF02641.15 gi|150399340|ref|YP_001323107.1| - 3.8e-29 100.9 0.1 4.2e-29 100.7 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1993 TAL_effector PF03377.13 gi|150399340|ref|YP_001323107.1| - 0.17 12.3 0.0 0.26 11.7 0.0 1.4 1 0 0 1 1 1 0 TAL effector repeat CRCB PF02537.15 gi|150399341|ref|YP_001323108.1| - 1.9e-23 82.6 10.3 2.2e-23 82.3 10.3 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) Acetyltransf_1 PF00583.25 gi|150399342|ref|YP_001323109.1| - 2e-15 57.0 0.1 2.5e-15 56.7 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|150399342|ref|YP_001323109.1| - 1.2e-09 38.2 0.0 1.6e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|150399342|ref|YP_001323109.1| - 2.9e-09 37.2 0.0 4.5e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|150399342|ref|YP_001323109.1| - 0.00038 20.4 0.0 0.0006 19.7 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein AAA_18 PF13238.6 gi|150399343|ref|YP_001323110.1| - 1.3e-13 51.6 0.1 1.9e-13 51.1 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|150399343|ref|YP_001323110.1| - 6.5e-13 49.3 0.0 1.1e-12 48.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain CoaE PF01121.20 gi|150399343|ref|YP_001323110.1| - 0.00047 19.9 0.0 0.066 12.9 0.0 2.2 2 0 0 2 2 2 1 Dephospho-CoA kinase AAA_33 PF13671.6 gi|150399343|ref|YP_001323110.1| - 0.0018 18.4 0.1 1.8 8.7 0.0 2.3 2 0 0 2 2 2 2 AAA domain MeaB PF03308.16 gi|150399343|ref|YP_001323110.1| - 0.0067 15.4 0.2 0.028 13.4 0.0 1.9 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 gi|150399343|ref|YP_001323110.1| - 0.0072 16.4 0.4 0.36 10.9 0.1 2.8 3 0 0 3 3 3 1 50S ribosome-binding GTPase ADK PF00406.22 gi|150399343|ref|YP_001323110.1| - 0.032 14.3 0.1 0.061 13.4 0.0 1.7 1 1 0 1 1 1 0 Adenylate kinase RNA_helicase PF00910.22 gi|150399343|ref|YP_001323110.1| - 0.066 13.6 0.1 0.65 10.4 0.1 2.2 1 1 0 1 1 1 0 RNA helicase AAA_16 PF13191.6 gi|150399343|ref|YP_001323110.1| - 0.073 13.4 0.1 0.14 12.5 0.1 2.0 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|150399343|ref|YP_001323110.1| - 0.11 13.0 0.9 0.11 13.0 0.9 1.4 1 1 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 gi|150399343|ref|YP_001323110.1| - 0.14 11.5 0.0 0.25 10.6 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_23 PF13476.6 gi|150399343|ref|YP_001323110.1| - 3.6 8.0 7.1 4 7.9 0.7 2.4 2 1 0 2 2 2 0 AAA domain Class_IIIsignal PF04021.12 gi|150399344|ref|YP_001323111.1| - 6.2e-11 41.9 1.6 8.7e-11 41.4 1.6 1.2 1 0 0 1 1 1 1 Class III signal peptide DUF4244 PF14029.6 gi|150399344|ref|YP_001323111.1| - 0.01 15.3 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4244) Inhibitor_I53 PF11714.8 gi|150399344|ref|YP_001323111.1| - 0.032 14.4 1.0 0.044 14.0 0.8 1.3 1 1 0 1 1 1 0 Thrombin inhibitor Madanin DEAD PF00270.29 gi|150399345|ref|YP_001323112.1| - 1.6e-21 76.9 0.0 3.8e-21 75.6 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|150399345|ref|YP_001323112.1| - 3.1e-15 56.5 0.0 2.4e-14 53.6 0.0 2.6 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|150399345|ref|YP_001323112.1| - 5.5e-10 39.5 0.0 1.4e-09 38.1 0.0 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF2334 PF10096.9 gi|150399346|ref|YP_001323113.1| - 1.4e-28 99.9 1.5 1.8e-28 99.6 1.5 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Polysacc_deac_1 PF01522.21 gi|150399346|ref|YP_001323113.1| - 0.0094 15.8 0.0 0.017 15.0 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Toprim_4 PF13662.6 gi|150399347|ref|YP_001323114.1| - 1.3e-11 44.8 0.1 3.4e-11 43.5 0.1 1.7 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|150399347|ref|YP_001323114.1| - 3.9e-05 24.0 0.0 9.7e-05 22.7 0.0 1.8 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|150399347|ref|YP_001323114.1| - 0.0019 18.4 0.2 0.0019 18.4 0.2 3.3 1 1 2 3 3 3 1 Toprim domain DUF3799 PF12684.7 gi|150399347|ref|YP_001323114.1| - 0.06 13.1 2.6 0.14 11.9 2.6 1.6 1 0 0 1 1 1 0 PDDEXK-like domain of unknown function (DUF3799) Type2_restr_D3 PF16902.5 gi|150399347|ref|YP_001323114.1| - 8.2 6.4 8.7 1.6 8.7 1.3 2.8 2 1 0 2 2 2 0 Type-2 restriction enzyme D3 domain UPF0058 PF01893.16 gi|150399348|ref|YP_001323115.1| - 8.3e-32 109.3 0.1 9.9e-32 109.1 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 UbiD PF01977.16 gi|150399349|ref|YP_001323116.1| - 1.3e-87 294.3 0.0 1.7e-87 294.0 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Peptidase_C31 PF05410.13 gi|150399349|ref|YP_001323116.1| - 0.026 14.6 0.0 0.086 12.9 0.0 1.9 2 0 0 2 2 2 0 Porcine arterivirus-type cysteine proteinase alpha Ribosomal_L16 PF00252.18 gi|150399350|ref|YP_001323117.1| - 3.6e-30 104.7 0.3 4.3e-30 104.4 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DUF4189 PF13827.6 gi|150399350|ref|YP_001323117.1| - 0.064 13.8 0.1 0.12 12.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4189) MMR_HSR1 PF01926.23 gi|150399351|ref|YP_001323118.1| - 1.9e-18 66.6 0.2 3.2e-18 65.9 0.2 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|150399351|ref|YP_001323118.1| - 3.8e-13 49.3 1.2 3.4e-12 46.2 1.2 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|150399351|ref|YP_001323118.1| - 5.2e-05 23.2 0.4 0.038 13.9 0.3 2.6 2 1 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 gi|150399351|ref|YP_001323118.1| - 0.00067 19.3 0.3 0.062 12.8 0.0 2.6 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain MeaB PF03308.16 gi|150399351|ref|YP_001323118.1| - 0.00087 18.4 0.2 1 8.3 0.0 2.4 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Dynamin_N PF00350.23 gi|150399351|ref|YP_001323118.1| - 0.0023 18.0 7.5 0.0045 17.1 1.2 3.0 2 1 1 3 3 3 2 Dynamin family DUF1749 PF08538.10 gi|150399351|ref|YP_001323118.1| - 0.0023 17.1 0.3 0.22 10.6 0.0 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF1749) PduV-EutP PF10662.9 gi|150399351|ref|YP_001323118.1| - 0.0034 17.1 0.3 0.0074 16.0 0.3 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 gi|150399351|ref|YP_001323118.1| - 0.05 13.8 1.8 0.059 13.6 0.2 1.9 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AIG1 PF04548.16 gi|150399351|ref|YP_001323118.1| - 0.063 12.6 0.0 0.093 12.1 0.0 1.4 1 0 0 1 1 1 0 AIG1 family DUF815 PF05673.13 gi|150399351|ref|YP_001323118.1| - 0.078 12.1 0.0 0.14 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Septin PF00735.18 gi|150399351|ref|YP_001323118.1| - 0.087 12.1 3.5 1.5 8.0 2.8 2.4 1 1 0 1 1 1 0 Septin ABC_tran PF00005.27 gi|150399351|ref|YP_001323118.1| - 0.09 13.3 0.7 0.16 12.5 0.2 2.0 1 1 1 2 2 2 0 ABC transporter AAA_16 PF13191.6 gi|150399351|ref|YP_001323118.1| - 0.14 12.6 0.0 0.21 12.0 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain Ribul_P_3_epim PF00834.19 gi|150399351|ref|YP_001323118.1| - 0.14 11.5 0.2 0.49 9.8 0.0 1.9 2 1 1 3 3 3 0 Ribulose-phosphate 3 epimerase family AAA_29 PF13555.6 gi|150399351|ref|YP_001323118.1| - 0.16 11.7 0.0 0.34 10.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Glyco_hydro_57 PF03065.15 gi|150399352|ref|YP_001323119.1| - 2.2e-63 214.4 4.1 2.2e-63 214.4 4.1 1.4 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.21 gi|150399352|ref|YP_001323119.1| - 1e-05 25.4 0.0 1.7e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase HEPN PF05168.14 gi|150399352|ref|YP_001323119.1| - 0.08 13.1 1.3 8.7 6.5 0.1 2.6 2 0 0 2 2 2 0 HEPN domain DUF2733 PF10813.8 gi|150399352|ref|YP_001323119.1| - 0.22 11.3 0.5 0.47 10.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) Glyco_hydro_15 PF00723.21 gi|150399353|ref|YP_001323120.1| - 7.5e-15 54.6 0.3 2.7e-10 39.6 0.3 3.4 1 1 0 1 1 1 1 Glycosyl hydrolases family 15 SQHop_cyclase_C PF13243.6 gi|150399353|ref|YP_001323120.1| - 0.0027 16.9 0.1 0.06 12.4 0.4 2.2 2 0 0 2 2 2 1 Squalene-hopene cyclase C-terminal domain Glucodextran_N PF09137.11 gi|150399353|ref|YP_001323120.1| - 0.013 15.1 0.0 0.022 14.3 0.0 1.3 1 0 0 1 1 1 0 Glucodextranase, domain N Glyco_transf_36 PF06165.11 gi|150399353|ref|YP_001323120.1| - 0.055 12.9 0.3 0.17 11.3 0.3 1.8 2 0 0 2 2 2 0 Glycosyltransferase family 36 Prenyltrans PF00432.21 gi|150399353|ref|YP_001323120.1| - 0.058 13.1 0.2 0.42 10.4 0.1 2.5 3 0 0 3 3 3 0 Prenyltransferase and squalene oxidase repeat DUF4259 PF14078.6 gi|150399353|ref|YP_001323120.1| - 0.16 12.7 0.1 0.56 10.9 0.1 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4259) Glycos_transf_1 PF00534.20 gi|150399354|ref|YP_001323121.1| - 9.8e-47 158.7 0.0 1.3e-46 158.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|150399354|ref|YP_001323121.1| - 1.7e-31 109.4 0.0 2.7e-31 108.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|150399354|ref|YP_001323121.1| - 2.4e-31 109.0 0.0 7.2e-31 107.5 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_transf_5 PF08323.11 gi|150399354|ref|YP_001323121.1| - 2.8e-26 92.7 0.3 2.4e-23 83.1 0.3 2.4 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_4_4 PF13579.6 gi|150399354|ref|YP_001323121.1| - 4.9e-21 75.8 0.0 8.8e-21 75.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|150399354|ref|YP_001323121.1| - 6.8e-11 42.4 0.0 1.3e-10 41.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|150399354|ref|YP_001323121.1| - 4.5e-06 27.0 0.0 8e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_20 PF00982.21 gi|150399354|ref|YP_001323121.1| - 0.0086 14.8 0.0 0.91 8.1 0.0 2.2 2 0 0 2 2 2 2 Glycosyltransferase family 20 ubiquitin PF00240.23 gi|150399354|ref|YP_001323121.1| - 0.24 11.2 0.5 6.5 6.6 0.0 2.6 3 0 0 3 3 3 0 Ubiquitin family Glyco_transf_5 PF08323.11 gi|150399355|ref|YP_001323122.1| - 3.1e-27 95.8 0.0 7.5e-27 94.6 0.0 1.6 1 0 0 1 1 1 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 gi|150399355|ref|YP_001323122.1| - 3.4e-17 62.5 0.0 7.5e-17 61.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|150399355|ref|YP_001323122.1| - 1.3e-15 58.0 0.0 2.7e-15 57.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|150399355|ref|YP_001323122.1| - 5.7e-06 26.4 0.0 1.5e-05 25.1 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase Family 4 PGI PF00342.19 gi|150399356|ref|YP_001323123.1| - 1.2e-39 136.3 1.1 4.1e-38 131.2 1.1 2.1 1 1 0 1 1 1 1 Phosphoglucose isomerase ADP_PFK_GK PF04587.15 gi|150399357|ref|YP_001323124.1| - 3.9e-112 374.9 0.5 4.4e-112 374.7 0.5 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region FrhB_FdhB_C PF04432.13 gi|150399358|ref|YP_001323125.1| - 4.2e-33 114.4 0.3 4.2e-33 114.4 0.3 2.0 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|150399358|ref|YP_001323125.1| - 4.4e-21 74.8 0.0 7.5e-21 74.1 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_17 PF13534.6 gi|150399358|ref|YP_001323125.1| - 1.1e-06 29.1 18.2 1e-05 25.9 15.9 3.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399358|ref|YP_001323125.1| - 4.3e-06 26.7 14.4 0.00071 19.6 0.3 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399358|ref|YP_001323125.1| - 4.2e-05 23.9 17.1 0.00015 22.1 15.6 2.5 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399358|ref|YP_001323125.1| - 0.00048 19.8 15.1 0.001 18.8 4.3 3.3 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399358|ref|YP_001323125.1| - 0.0011 19.3 2.8 0.0011 19.3 2.8 3.6 3 1 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399358|ref|YP_001323125.1| - 0.003 17.7 22.5 0.011 15.9 3.2 3.5 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399358|ref|YP_001323125.1| - 0.0044 17.2 8.7 0.12 12.6 0.4 3.3 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399358|ref|YP_001323125.1| - 0.0044 17.6 20.1 0.043 14.4 3.9 2.9 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399358|ref|YP_001323125.1| - 0.014 15.4 19.9 0.064 13.4 3.6 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|150399358|ref|YP_001323125.1| - 0.024 15.5 19.3 0.36 11.7 1.3 3.1 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399358|ref|YP_001323125.1| - 0.037 14.1 4.9 0.037 14.1 4.9 3.0 2 0 0 2 2 2 0 4Fe-4S binding domain PBSX_XtrA PF17356.2 gi|150399358|ref|YP_001323125.1| - 0.079 12.9 0.1 0.15 12.0 0.1 1.4 1 0 0 1 1 1 0 Phage-like element PBSX protein XtrA Fer4_13 PF13370.6 gi|150399358|ref|YP_001323125.1| - 0.55 10.8 15.6 2.3 8.8 5.6 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|150399358|ref|YP_001323125.1| - 4.7 8.4 25.4 0.26 12.3 5.3 3.6 3 1 1 4 4 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|150399358|ref|YP_001323125.1| - 9.1 7.3 25.6 0.63 11.0 3.8 3.5 2 1 2 4 4 4 0 4Fe-4S double cluster binding domain Molybdopterin PF00384.22 gi|150399359|ref|YP_001323126.1| - 7e-102 341.6 0.0 1e-101 341.0 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|150399359|ref|YP_001323126.1| - 1e-30 106.0 0.0 2e-30 105.1 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|150399359|ref|YP_001323126.1| - 4e-18 65.1 1.8 4e-18 65.1 1.8 2.0 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain RsmJ PF04378.13 gi|150399359|ref|YP_001323126.1| - 0.042 13.1 0.0 0.22 10.7 0.0 2.0 2 0 0 2 2 2 0 Ribosomal RNA large subunit methyltransferase D, RlmJ Pro_CA PF00484.19 gi|150399360|ref|YP_001323127.1| - 4.7e-17 62.7 0.2 6.9e-16 58.9 0.2 2.0 1 1 0 1 1 1 1 Carbonic anhydrase DUF1889 PF08986.10 gi|150399360|ref|YP_001323127.1| - 0.015 15.7 0.0 0.092 13.2 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1889) DUF4525 PF15027.6 gi|150399361|ref|YP_001323128.1| - 0.009 15.7 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4525) DUF5105 PF17118.5 gi|150399361|ref|YP_001323128.1| - 0.076 12.8 0.1 0.096 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5105) VirB3 PF05101.13 gi|150399361|ref|YP_001323128.1| - 0.33 11.2 2.5 0.59 10.4 2.5 1.3 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein Form_Nir_trans PF01226.17 gi|150399362|ref|YP_001323129.1| - 3.1e-74 249.3 34.1 3.5e-74 249.1 34.1 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter SeleniumBinding PF11524.8 gi|150399363|ref|YP_001323130.1| - 5.4e-35 119.7 0.6 5.9e-35 119.5 0.6 1.0 1 0 0 1 1 1 1 Selenium binding protein sCache_3_3 PF17202.4 gi|150399364|ref|YP_001323131.1| - 1.7e-32 112.1 0.6 6e-32 110.3 0.6 2.0 1 0 0 1 1 1 1 Single cache domain 3 HATPase_c PF02518.26 gi|150399364|ref|YP_001323131.1| - 3.4e-32 111.3 0.2 9e-32 109.9 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cache_3-Cache_2 PF17201.4 gi|150399364|ref|YP_001323131.1| - 2.5e-27 95.9 0.4 2.5e-27 95.9 0.4 2.0 2 1 0 2 2 2 1 Cache 3/Cache 2 fusion domain HisKA PF00512.25 gi|150399364|ref|YP_001323131.1| - 8.9e-19 67.3 0.1 3.1e-18 65.6 0.1 2.0 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|150399364|ref|YP_001323131.1| - 1.8e-11 44.2 0.0 5.8e-11 42.6 0.0 1.9 2 0 0 2 2 2 1 HAMP domain sCache_3_2 PF17203.4 gi|150399364|ref|YP_001323131.1| - 1.4e-10 41.5 0.2 8.3e-06 26.0 0.0 2.7 2 0 0 2 2 2 2 Single cache domain 3 dCache_3 PF14827.6 gi|150399364|ref|YP_001323131.1| - 1.4e-08 34.7 3.8 1.4e-08 34.7 1.8 2.0 2 1 0 2 2 2 1 Double sensory domain of two-component sensor kinase dCache_1 PF02743.18 gi|150399364|ref|YP_001323131.1| - 2.6e-08 34.0 11.3 1.4e-06 28.3 2.4 3.2 2 1 0 3 3 3 2 Cache domain HATPase_c_3 PF13589.6 gi|150399364|ref|YP_001323131.1| - 6.7e-07 29.2 0.1 6.7e-07 29.2 0.1 2.1 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|150399364|ref|YP_001323131.1| - 3.1e-06 27.0 0.9 7e-06 25.9 0.1 2.0 2 0 0 2 2 2 1 GHKL domain bZIP_1 PF00170.21 gi|150399364|ref|YP_001323131.1| - 0.29 11.3 3.2 0.77 9.9 3.2 1.7 1 0 0 1 1 1 0 bZIP transcription factor AI-2E_transport PF01594.16 gi|150399364|ref|YP_001323131.1| - 2.8 7.0 6.7 4.7 6.3 0.0 2.9 3 0 0 3 3 3 0 AI-2E family transporter Response_reg PF00072.24 gi|150399365|ref|YP_001323132.1| - 3.7e-30 104.4 0.8 4.2e-30 104.2 0.8 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Peripla_BP_4 PF13407.6 gi|150399365|ref|YP_001323132.1| - 0.013 15.0 0.1 0.42 10.2 0.1 2.0 1 1 1 2 2 2 0 Periplasmic binding protein domain FIST PF08495.10 gi|150399366|ref|YP_001323133.1| - 4.2e-19 69.2 0.1 1.1e-18 67.8 0.0 1.7 2 0 0 2 2 2 1 FIST N domain FIST_C PF10442.9 gi|150399366|ref|YP_001323133.1| - 0.00032 20.7 0.0 0.00077 19.5 0.0 1.6 1 0 0 1 1 1 1 FIST C domain TrmB PF01978.19 gi|150399366|ref|YP_001323133.1| - 0.049 13.5 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB FAM25 PF15825.5 gi|150399366|ref|YP_001323133.1| - 6.9 7.1 5.9 3 8.2 0.0 3.2 4 0 0 4 4 4 0 FAM25 family PPS_PS PF02006.16 gi|150399367|ref|YP_001323134.1| - 3.5e-71 238.4 1.8 4.3e-71 238.1 1.8 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase Methyltrans_SAM PF10672.9 gi|150399368|ref|YP_001323135.1| - 9.2e-15 54.5 0.2 1.3e-14 54.1 0.2 1.1 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Met_10 PF02475.16 gi|150399368|ref|YP_001323135.1| - 4.7e-09 36.3 4.0 2.3e-08 34.1 3.7 2.1 1 1 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|150399368|ref|YP_001323135.1| - 5.1e-09 36.0 0.0 8.9e-09 35.2 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 gi|150399368|ref|YP_001323135.1| - 7.1e-08 32.4 0.1 1.2e-07 31.6 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|150399368|ref|YP_001323135.1| - 5.6e-07 29.3 1.3 1.6e-06 27.8 0.1 2.2 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|150399368|ref|YP_001323135.1| - 3.5e-06 27.6 0.0 1e-05 26.1 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|150399368|ref|YP_001323135.1| - 3.7e-06 27.2 0.0 7.9e-06 26.1 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase PrmA PF06325.13 gi|150399368|ref|YP_001323135.1| - 8.3e-06 25.4 0.4 1.4e-05 24.7 0.4 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 gi|150399368|ref|YP_001323135.1| - 3e-05 23.6 0.0 7.2e-05 22.3 0.0 1.7 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|150399368|ref|YP_001323135.1| - 4.8e-05 23.0 0.1 9.7e-05 22.0 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|150399368|ref|YP_001323135.1| - 0.00038 19.9 0.3 0.00073 18.9 0.3 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TRM PF02005.16 gi|150399368|ref|YP_001323135.1| - 0.00041 19.6 0.2 0.00059 19.1 0.2 1.3 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_12 PF08242.12 gi|150399368|ref|YP_001323135.1| - 0.0022 18.7 0.2 0.0071 17.1 0.0 2.0 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|150399368|ref|YP_001323135.1| - 0.0029 17.6 0.1 0.0075 16.2 0.1 1.7 1 0 0 1 1 1 1 Methyltransferase domain PUA_3 PF17785.1 gi|150399368|ref|YP_001323135.1| - 0.0032 17.2 0.0 0.0075 16.1 0.0 1.7 1 0 0 1 1 1 1 PUA-like domain Methyltransf_23 PF13489.6 gi|150399368|ref|YP_001323135.1| - 0.006 16.4 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|150399368|ref|YP_001323135.1| - 0.012 16.3 0.1 0.13 13.0 0.0 2.4 1 1 1 2 2 2 0 Methyltransferase domain PUA PF01472.20 gi|150399368|ref|YP_001323135.1| - 0.046 13.7 0.0 0.1 12.6 0.0 1.6 1 0 0 1 1 1 0 PUA domain DHquinase_II PF01220.19 gi|150399368|ref|YP_001323135.1| - 0.078 12.6 0.1 0.19 11.4 0.1 1.7 1 1 0 1 1 1 0 Dehydroquinase class II TAL_FSA PF00923.19 gi|150399369|ref|YP_001323136.1| - 1.5e-64 218.2 2.7 8e-64 215.7 2.7 2.0 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase HTH_34 PF13601.6 gi|150399369|ref|YP_001323136.1| - 0.095 12.9 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2119 PF09892.9 gi|150399370|ref|YP_001323137.1| - 2e-67 226.2 0.4 2.3e-67 226.0 0.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) DUF2683 PF10884.8 gi|150399370|ref|YP_001323137.1| - 1.2 9.5 3.9 12 6.2 0.3 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2683) IMP_cyclohyd PF07826.11 gi|150399371|ref|YP_001323138.1| - 3e-71 239.0 0.6 3.5e-71 238.8 0.6 1.0 1 0 0 1 1 1 1 IMP cyclohydrolase-like protein DUF2138 PF09909.9 gi|150399371|ref|YP_001323138.1| - 0.055 11.8 0.0 0.078 11.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2138) Fer4 PF00037.27 gi|150399372|ref|YP_001323139.1| - 4.5e-15 54.7 17.6 1.2e-07 31.2 2.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399372|ref|YP_001323139.1| - 6.4e-09 35.9 29.0 1.5e-06 28.2 16.9 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399372|ref|YP_001323139.1| - 4.9e-08 33.8 13.5 0.001 20.0 2.5 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|150399372|ref|YP_001323139.1| - 7.4e-08 32.9 16.3 6.2e-07 29.9 16.4 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399372|ref|YP_001323139.1| - 1.6e-07 31.0 19.5 0.00016 21.5 4.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399372|ref|YP_001323139.1| - 3e-07 30.5 18.0 3.5e-07 30.2 18.0 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399372|ref|YP_001323139.1| - 1.2e-06 29.1 18.9 0.0045 17.8 3.7 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399372|ref|YP_001323139.1| - 2.8e-06 27.4 21.3 0.0038 17.6 6.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399372|ref|YP_001323139.1| - 7e-06 25.9 19.4 0.0086 16.1 5.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399372|ref|YP_001323139.1| - 1.8e-05 24.8 19.5 0.00016 21.7 19.5 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399372|ref|YP_001323139.1| - 0.0002 21.7 16.2 0.023 15.1 5.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399372|ref|YP_001323139.1| - 0.00028 21.4 18.0 0.032 14.8 5.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|150399372|ref|YP_001323139.1| - 0.021 15.4 16.1 0.27 11.8 3.9 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|150399372|ref|YP_001323139.1| - 0.048 14.5 13.8 0.2 12.5 3.2 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399372|ref|YP_001323139.1| - 0.74 10.0 15.7 26 5.1 16.2 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150399372|ref|YP_001323139.1| - 1.6 9.5 14.9 0.54 11.0 2.1 2.4 2 1 0 2 2 2 0 4Fe-4S single cluster domain SieB PF14163.6 gi|150399373|ref|YP_001323140.1| - 0.0047 16.4 3.1 0.0095 15.4 3.1 1.5 1 0 0 1 1 1 1 Super-infection exclusion protein B Vpu PF00558.19 gi|150399373|ref|YP_001323140.1| - 0.027 14.2 0.5 0.094 12.5 0.5 1.9 1 0 0 1 1 1 0 Vpu protein DUF3050 PF11251.8 gi|150399373|ref|YP_001323140.1| - 0.045 13.4 0.1 0.079 12.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3050) Phage_holin_3_6 PF07332.11 gi|150399373|ref|YP_001323140.1| - 0.092 12.8 0.2 0.15 12.1 0.2 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Arc_PepC PF06819.11 gi|150399373|ref|YP_001323140.1| - 0.13 12.4 5.2 4 7.6 2.4 3.2 2 1 1 3 3 3 0 Archaeal Peptidase A24 C-terminal Domain XPG_I PF00867.18 gi|150399374|ref|YP_001323141.1| - 3.2e-25 88.3 0.8 6e-25 87.4 0.0 1.9 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 gi|150399374|ref|YP_001323141.1| - 7.3e-16 58.5 0.0 1.4e-15 57.6 0.0 1.5 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|150399374|ref|YP_001323141.1| - 1.3 9.6 4.4 0.64 10.7 0.1 2.6 2 1 1 3 3 3 0 5'-3' exonuclease, C-terminal SAM fold DnaJ_CXXCXGXG PF00684.19 gi|150399375|ref|YP_001323142.1| - 1e-08 35.4 7.1 1e-08 35.4 7.1 3.4 2 1 2 4 4 4 2 DnaJ central domain S1 PF00575.23 gi|150399375|ref|YP_001323142.1| - 6e-07 29.7 1.6 1.4e-06 28.6 0.6 2.3 2 0 0 2 2 2 1 S1 RNA binding domain DHH PF01368.20 gi|150399375|ref|YP_001323142.1| - 0.00017 21.8 0.1 0.00038 20.6 0.1 1.6 1 0 0 1 1 1 1 DHH family tRNA_anti-codon PF01336.25 gi|150399375|ref|YP_001323142.1| - 0.00034 20.6 0.7 0.0028 17.6 0.3 2.6 3 0 0 3 3 3 1 OB-fold nucleic acid binding domain Anti-TRAP PF15777.5 gi|150399375|ref|YP_001323142.1| - 0.005 16.8 20.0 0.02 14.9 2.2 3.8 1 1 0 2 2 2 1 Tryptophan RNA-binding attenuator protein inhibitory protein Formyl_trans_C PF02911.18 gi|150399375|ref|YP_001323142.1| - 0.0068 16.6 0.1 11 6.3 0.0 3.3 3 0 0 3 3 3 1 Formyl transferase, C-terminal domain DUF1356 PF07092.12 gi|150399375|ref|YP_001323142.1| - 0.63 9.3 3.4 1.6 7.9 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1356) CxC3 PF18804.1 gi|150399375|ref|YP_001323142.1| - 0.68 9.8 6.4 0.56 10.1 2.7 2.3 2 0 0 2 2 2 0 CxC3 like cysteine cluster associated with KDZ transposases zf-CHY PF05495.12 gi|150399375|ref|YP_001323142.1| - 6.7 7.3 12.2 8.4 7.0 4.2 2.7 1 1 1 2 2 2 0 CHY zinc finger POR PF01558.18 gi|150399376|ref|YP_001323143.1| - 7.7e-34 117.3 0.1 9e-34 117.1 0.1 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|150399377|ref|YP_001323144.1| - 1.5e-37 128.8 0.0 3.7e-37 127.5 0.0 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain tRNA-synt_1f PF01921.18 gi|150399380|ref|YP_001323147.1| - 4.2e-135 450.3 0.1 5.2e-135 450.0 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 gi|150399380|ref|YP_001323147.1| - 3.5e-05 23.3 0.1 0.094 12.0 0.0 3.6 3 1 0 4 4 4 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|150399380|ref|YP_001323147.1| - 6e-05 22.0 0.0 0.024 13.4 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (M) DUF2387 PF09526.10 gi|150399380|ref|YP_001323147.1| - 0.022 14.9 0.3 0.069 13.3 0.3 1.8 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) zinc_ribbon_10 PF10058.9 gi|150399380|ref|YP_001323147.1| - 0.15 11.8 1.1 0.35 10.6 0.6 1.9 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Ribosomal_S13 PF00416.22 gi|150399381|ref|YP_001323148.1| - 1.3e-35 122.6 0.0 1.5e-35 122.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 HHH PF00633.23 gi|150399381|ref|YP_001323148.1| - 0.053 13.4 0.1 0.099 12.6 0.1 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|150399381|ref|YP_001323148.1| - 0.084 13.5 0.0 0.14 12.8 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix domain FbpA PF05833.11 gi|150399381|ref|YP_001323148.1| - 0.095 11.4 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) S4 PF01479.25 gi|150399382|ref|YP_001323149.1| - 1.7e-20 72.4 1.7 1.5e-18 66.2 0.3 2.4 2 0 0 2 2 2 2 S4 domain Efg1 PF10153.9 gi|150399382|ref|YP_001323149.1| - 0.43 10.9 4.6 0.52 10.7 1.3 2.0 1 1 1 2 2 2 0 rRNA-processing protein Efg1 Ribosomal_S11 PF00411.19 gi|150399383|ref|YP_001323150.1| - 9.2e-44 148.3 1.8 1.1e-43 148.1 1.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 Pilus_CpaD PF09476.10 gi|150399383|ref|YP_001323150.1| - 0.024 14.4 0.3 0.03 14.1 0.3 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) DUF3010 PF11215.8 gi|150399383|ref|YP_001323150.1| - 0.066 13.5 0.0 0.07 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3010) RNA_pol_A_bac PF01000.26 gi|150399384|ref|YP_001323151.1| - 6.2e-23 81.3 0.0 8e-21 74.5 0.0 2.8 2 1 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|150399384|ref|YP_001323151.1| - 2.8e-13 49.1 0.0 4.4e-13 48.5 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Hce2 PF14856.6 gi|150399384|ref|YP_001323151.1| - 0.088 13.1 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 Pathogen effector; putative necrosis-inducing factor Ribosomal_L18 PF17135.4 gi|150399385|ref|YP_001323152.1| - 1.9e-11 43.7 0.1 2.2e-11 43.5 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|150399385|ref|YP_001323152.1| - 1.1e-09 39.0 2.0 2.5e-09 37.9 2.0 1.6 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DUF4816 PF16086.5 gi|150399385|ref|YP_001323152.1| - 0.029 14.3 1.4 0.055 13.4 1.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4816) DUF4989 PF16379.5 gi|150399385|ref|YP_001323152.1| - 0.11 11.8 2.0 1.3 8.2 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4989) Ribosomal_L13 PF00572.18 gi|150399386|ref|YP_001323153.1| - 3e-07 30.7 0.2 0.00042 20.6 0.0 2.1 1 1 1 2 2 2 2 Ribosomal protein L13 Ribosomal_S9 PF00380.19 gi|150399387|ref|YP_001323154.1| - 9.6e-25 87.5 0.2 1.1e-24 87.3 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 RNA_pol_N PF01194.17 gi|150399388|ref|YP_001323155.1| - 3e-25 88.3 0.2 3.4e-25 88.1 0.2 1.1 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.12 gi|150399388|ref|YP_001323155.1| - 0.0052 17.0 0.5 0.009 16.2 0.5 1.5 1 1 0 1 1 1 1 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) RNA_pol_Rpb6 PF01192.22 gi|150399389|ref|YP_001323156.1| - 3.3e-11 42.9 0.0 3.7e-11 42.7 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 Enolase_N PF03952.16 gi|150399390|ref|YP_001323157.1| - 2.3e-07 31.0 0.1 8.3e-07 29.2 0.0 1.9 2 0 0 2 2 2 1 Enolase, N-terminal domain Fer4 PF00037.27 gi|150399391|ref|YP_001323158.1| - 2e-09 36.9 17.7 3.7e-07 29.7 3.4 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399391|ref|YP_001323158.1| - 1.3e-08 34.8 22.1 1.1e-06 28.6 12.7 1.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399391|ref|YP_001323158.1| - 3e-08 34.1 11.7 6e-08 33.2 11.9 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399391|ref|YP_001323158.1| - 1.1e-07 31.9 11.1 1.4e-07 31.6 11.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399391|ref|YP_001323158.1| - 5.6e-07 29.4 14.9 9.7e-05 22.3 3.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399391|ref|YP_001323158.1| - 6.4e-07 29.4 13.3 8.1e-07 29.1 13.3 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399391|ref|YP_001323158.1| - 3.1e-06 28.0 10.8 0.0028 18.6 1.7 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|150399391|ref|YP_001323158.1| - 0.00044 20.2 13.0 0.05 13.7 3.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399391|ref|YP_001323158.1| - 0.0052 17.2 12.5 0.35 11.5 3.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|150399391|ref|YP_001323158.1| - 0.0082 16.3 13.1 0.03 14.5 3.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399391|ref|YP_001323158.1| - 0.024 15.6 16.0 0.066 14.2 3.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|150399391|ref|YP_001323158.1| - 0.15 12.6 14.4 2.1 8.9 14.4 2.2 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|150399391|ref|YP_001323158.1| - 0.18 12.5 0.7 0.18 12.5 0.7 2.8 1 1 2 3 3 3 0 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|150399391|ref|YP_001323158.1| - 0.24 12.0 11.5 1.4 9.5 1.5 2.2 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399391|ref|YP_001323158.1| - 2.2 8.8 13.4 6.1e+02 1.0 13.4 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain HupF_HypC PF01455.18 gi|150399392|ref|YP_001323159.1| - 4.1e-22 78.1 0.0 5.2e-22 77.8 0.0 1.1 1 0 0 1 1 1 1 HupF/HypC family SNARE_assoc PF09335.11 gi|150399393|ref|YP_001323160.1| - 2.8e-18 66.6 7.0 3.1e-18 66.4 5.8 1.5 1 1 1 2 2 2 1 SNARE associated Golgi protein Sm_multidrug_ex PF06695.11 gi|150399393|ref|YP_001323160.1| - 1.4 9.6 10.3 0.18 12.4 4.1 2.4 2 1 1 3 3 3 0 Putative small multi-drug export protein Pyr_redox_2 PF07992.14 gi|150399394|ref|YP_001323161.1| - 1e-27 97.2 0.1 3.8e-24 85.4 0.0 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|150399394|ref|YP_001323161.1| - 3.9e-16 59.4 2.7 4.3e-09 36.8 0.0 3.3 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|150399394|ref|YP_001323161.1| - 9.3e-15 54.7 0.6 6e-14 52.0 0.6 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|150399394|ref|YP_001323161.1| - 9.3e-08 32.2 1.6 2.9e-07 30.6 0.1 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 gi|150399394|ref|YP_001323161.1| - 2.2e-06 28.0 0.1 0.00015 22.1 0.0 2.5 2 1 0 2 2 2 1 Putative NAD(P)-binding 3HCDH_N PF02737.18 gi|150399394|ref|YP_001323161.1| - 5.6e-06 26.3 0.0 0.079 12.8 0.0 2.3 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K_oxygenase PF13434.6 gi|150399394|ref|YP_001323161.1| - 1.3e-05 24.5 0.4 0.35 9.9 0.0 3.1 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 gi|150399394|ref|YP_001323161.1| - 3.4e-05 22.7 0.1 7.1e-05 21.7 0.0 1.6 2 0 0 2 2 2 1 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|150399394|ref|YP_001323161.1| - 4.7e-05 22.8 0.0 0.12 11.7 0.0 2.4 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain GIDA PF01134.22 gi|150399394|ref|YP_001323161.1| - 5.3e-05 22.5 0.1 0.0007 18.8 0.1 2.4 2 1 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|150399394|ref|YP_001323161.1| - 0.00013 21.3 0.4 0.00074 18.9 0.1 2.1 2 0 0 2 2 2 1 FAD binding domain 2-Hacid_dh_C PF02826.19 gi|150399394|ref|YP_001323161.1| - 0.00022 20.7 0.0 0.088 12.2 0.0 2.4 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thi4 PF01946.17 gi|150399394|ref|YP_001323161.1| - 0.00038 19.8 0.0 0.0007 18.9 0.0 1.4 1 0 0 1 1 1 1 Thi4 family NAD_Gly3P_dh_N PF01210.23 gi|150399394|ref|YP_001323161.1| - 0.0035 17.3 0.0 0.49 10.4 0.0 2.3 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 gi|150399394|ref|YP_001323161.1| - 0.004 16.8 0.1 4.8 6.8 0.1 3.1 3 0 0 3 3 3 1 Ketopantoate reductase PanE/ApbA FAD_binding_2 PF00890.24 gi|150399394|ref|YP_001323161.1| - 0.006 15.7 1.7 0.039 13.1 0.1 2.7 4 0 0 4 4 4 1 FAD binding domain DAO PF01266.24 gi|150399394|ref|YP_001323161.1| - 0.0065 16.1 0.0 0.0065 16.1 0.0 2.0 2 1 0 2 2 2 1 FAD dependent oxidoreductase XdhC_C PF13478.6 gi|150399394|ref|YP_001323161.1| - 0.0067 16.9 0.0 2.7 8.5 0.0 2.3 2 0 0 2 2 2 1 XdhC Rossmann domain Amino_oxidase PF01593.24 gi|150399394|ref|YP_001323161.1| - 0.016 14.5 0.0 0.23 10.7 0.0 2.1 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|150399394|ref|YP_001323161.1| - 0.021 13.9 0.0 0.036 13.1 0.0 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|150399394|ref|YP_001323161.1| - 0.03 14.3 0.0 0.13 12.3 0.0 2.0 3 0 0 3 3 2 0 FAD-NAD(P)-binding Trp_halogenase PF04820.14 gi|150399394|ref|YP_001323161.1| - 0.08 11.8 0.0 0.66 8.8 0.0 2.0 2 0 0 2 2 2 0 Tryptophan halogenase FAD_oxidored PF12831.7 gi|150399394|ref|YP_001323161.1| - 0.14 11.5 0.0 0.26 10.6 0.0 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase F-box_4 PF15966.5 gi|150399394|ref|YP_001323161.1| - 0.15 12.0 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 F-box Chorismate_synt PF01264.21 gi|150399395|ref|YP_001323162.1| - 4.3e-135 449.6 0.0 4.8e-135 449.5 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase MMR_HSR1 PF01926.23 gi|150399396|ref|YP_001323163.1| - 7.1e-20 71.2 2.2 8.6e-16 58.0 0.0 3.1 3 0 0 3 3 3 2 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|150399396|ref|YP_001323163.1| - 4.8e-13 48.9 0.4 1.5e-08 34.3 0.0 2.5 2 0 0 2 2 2 2 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|150399396|ref|YP_001323163.1| - 2.1e-08 34.2 1.1 5.9e-08 32.8 0.4 2.1 2 1 0 2 2 2 1 RsgA GTPase Dynamin_N PF00350.23 gi|150399396|ref|YP_001323163.1| - 4.8e-07 30.0 5.0 0.057 13.5 0.1 3.6 2 1 2 4 4 4 3 Dynamin family GTP_EFTU PF00009.27 gi|150399396|ref|YP_001323163.1| - 2.8e-05 23.8 0.5 0.0019 17.8 0.0 3.1 3 2 0 3 3 3 1 Elongation factor Tu GTP binding domain Roc PF08477.13 gi|150399396|ref|YP_001323163.1| - 0.00062 20.0 2.1 0.05 13.8 0.1 3.3 3 1 1 4 4 4 1 Ras of Complex, Roc, domain of DAPkinase AIG1 PF04548.16 gi|150399396|ref|YP_001323163.1| - 0.0021 17.5 0.2 0.0079 15.5 0.0 2.0 2 0 0 2 2 2 1 AIG1 family MMR_HSR1_Xtn PF16897.5 gi|150399396|ref|YP_001323163.1| - 0.0022 18.0 0.5 0.0022 18.0 0.5 2.2 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain cobW PF02492.19 gi|150399396|ref|YP_001323163.1| - 0.061 12.9 0.8 2.6 7.6 0.1 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Ribosomal_L7Ae PF01248.26 gi|150399396|ref|YP_001323163.1| - 0.097 12.4 0.2 31 4.4 0.1 3.2 3 0 0 3 3 3 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AAA_18 PF13238.6 gi|150399396|ref|YP_001323163.1| - 0.18 12.3 1.7 0.97 10.0 0.0 2.6 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 gi|150399396|ref|YP_001323163.1| - 0.43 11.1 5.5 1.6 9.2 5.4 2.2 1 1 0 1 1 1 0 ABC transporter GHMP_kinases_N PF00288.26 gi|150399397|ref|YP_001323164.1| - 5.8e-15 55.3 0.2 2.3e-14 53.4 0.1 2.0 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|150399397|ref|YP_001323164.1| - 2.2e-10 40.7 0.0 4.3e-10 39.8 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.9 gi|150399397|ref|YP_001323164.1| - 0.0017 17.9 0.0 0.003 17.1 0.0 1.4 1 0 0 1 1 1 1 Galactokinase galactose-binding signature GTP_EFTU PF00009.27 gi|150399398|ref|YP_001323165.1| - 5.2e-37 127.3 1.2 8.5e-37 126.6 1.2 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|150399398|ref|YP_001323165.1| - 3.9e-11 43.2 4.2 5.8e-11 42.6 2.3 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|150399398|ref|YP_001323165.1| - 1.8e-09 37.7 0.1 4.8e-09 36.3 0.1 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase MMR_HSR1_Xtn PF16897.5 gi|150399398|ref|YP_001323165.1| - 4.4e-05 23.4 0.2 0.00019 21.4 0.2 2.1 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain PduV-EutP PF10662.9 gi|150399398|ref|YP_001323165.1| - 0.00049 19.9 1.1 0.0044 16.8 1.1 2.3 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 gi|150399398|ref|YP_001323165.1| - 0.0017 17.9 1.2 0.01 15.3 0.4 2.6 2 1 0 2 2 2 1 Ferrous iron transport protein B GTP_EFTU_D4 PF14578.6 gi|150399398|ref|YP_001323165.1| - 0.0027 17.6 1.3 0.0095 15.8 1.3 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 4 RIBIOP_C PF04950.12 gi|150399398|ref|YP_001323165.1| - 0.0032 17.0 0.1 0.0055 16.2 0.1 1.3 1 0 0 1 1 1 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal RsgA_GTPase PF03193.16 gi|150399398|ref|YP_001323165.1| - 0.0052 16.7 1.6 0.079 12.9 0.2 2.3 1 1 1 2 2 2 1 RsgA GTPase SRPRB PF09439.10 gi|150399398|ref|YP_001323165.1| - 0.0069 15.8 0.7 0.036 13.5 0.1 2.2 1 1 0 2 2 2 1 Signal recognition particle receptor beta subunit MeaB PF03308.16 gi|150399398|ref|YP_001323165.1| - 0.02 13.9 0.1 0.043 12.8 0.1 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Septin PF00735.18 gi|150399398|ref|YP_001323165.1| - 0.097 11.9 1.5 0.48 9.7 0.0 2.4 2 1 1 3 3 3 0 Septin HycI PF01750.18 gi|150399399|ref|YP_001323166.1| - 1.6e-31 108.9 0.4 1.9e-31 108.6 0.4 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease Methyltransf_10 PF05971.12 gi|150399401|ref|YP_001323168.1| - 2e-11 43.8 0.0 2.6e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 RNA methyltransferase PrmA PF06325.13 gi|150399401|ref|YP_001323168.1| - 2e-09 37.3 0.1 4e-09 36.3 0.0 1.5 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|150399401|ref|YP_001323168.1| - 1.2e-08 34.7 0.0 4.2e-07 29.7 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|150399401|ref|YP_001323168.1| - 1.3e-06 29.0 0.0 3.9e-06 27.5 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|150399401|ref|YP_001323168.1| - 6.7e-06 26.0 0.0 1.5e-05 24.8 0.0 1.6 2 0 0 2 2 2 1 Lysine methyltransferase Methyltransf_3 PF01596.17 gi|150399401|ref|YP_001323168.1| - 0.00032 19.9 0.1 0.00059 19.1 0.1 1.5 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_31 PF13847.6 gi|150399401|ref|YP_001323168.1| - 0.00058 19.7 0.3 0.0014 18.5 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 gi|150399401|ref|YP_001323168.1| - 0.00077 19.3 0.0 0.0012 18.6 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.7 gi|150399401|ref|YP_001323168.1| - 0.00091 19.2 0.0 0.002 18.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|150399401|ref|YP_001323168.1| - 0.00094 19.0 0.0 0.002 18.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|150399401|ref|YP_001323168.1| - 0.0033 18.0 0.0 0.0076 16.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|150399401|ref|YP_001323168.1| - 0.0078 15.9 0.0 0.026 14.2 0.0 1.7 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Methyltransf_12 PF08242.12 gi|150399401|ref|YP_001323168.1| - 0.014 16.1 0.0 0.034 14.9 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain ADH_zinc_N PF00107.26 gi|150399401|ref|YP_001323168.1| - 0.041 13.8 0.0 0.083 12.9 0.0 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase Metallophos PF00149.28 gi|150399402|ref|YP_001323169.1| - 2.1e-14 54.5 0.6 2.1e-14 54.5 0.6 2.0 2 1 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|150399402|ref|YP_001323169.1| - 4.6e-12 46.4 0.0 7.9e-12 45.7 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF815 PF05673.13 gi|150399402|ref|YP_001323169.1| - 0.02 14.0 0.0 0.04 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_15 PF13175.6 gi|150399403|ref|YP_001323170.1| - 6.9e-08 32.6 63.9 6.9e-08 32.6 63.9 5.2 1 1 4 5 5 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|150399403|ref|YP_001323170.1| - 1.4e-06 27.9 0.1 2.8e-06 27.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 gi|150399403|ref|YP_001323170.1| - 3.1e-06 27.3 0.0 6.5e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 gi|150399403|ref|YP_001323170.1| - 0.00058 19.4 80.1 0.11 11.9 80.1 3.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 gi|150399403|ref|YP_001323170.1| - 0.0039 16.8 0.2 0.0039 16.8 0.2 2.7 3 0 0 3 3 3 1 AAA domain AAA_23 PF13476.6 gi|150399403|ref|YP_001323170.1| - 0.0047 17.4 178.4 0.33 11.4 97.0 7.2 2 1 3 5 5 3 1 AAA domain AAA_22 PF13401.6 gi|150399403|ref|YP_001323170.1| - 0.029 14.6 1.8 4.5 7.5 0.0 3.8 3 1 0 3 3 3 0 AAA domain MukB PF04310.12 gi|150399403|ref|YP_001323170.1| - 0.051 13.4 0.1 0.051 13.4 0.1 4.9 5 1 1 7 7 7 0 MukB N-terminal AsnC_trans_reg2 PF17805.1 gi|150399403|ref|YP_001323170.1| - 0.14 12.3 1.4 1.5 9.0 0.1 3.6 3 0 0 3 3 3 0 AsnC-like ligand binding domain SRP1_TIP1 PF00660.17 gi|150399403|ref|YP_001323170.1| - 0.65 10.1 4.2 14 5.9 0.1 3.5 3 0 0 3 3 3 0 Seripauperin and TIP1 family AAA_21 PF13304.6 gi|150399403|ref|YP_001323170.1| - 1.4 8.6 35.5 0.054 13.3 11.6 4.3 2 2 1 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system PIN_9 PF18477.1 gi|150399404|ref|YP_001323171.1| - 6.5e-24 84.5 0.1 7.3e-24 84.3 0.1 1.0 1 0 0 1 1 1 1 PIN like domain Fcf1 PF04900.12 gi|150399404|ref|YP_001323171.1| - 5.6e-10 39.5 0.4 7.5e-10 39.1 0.4 1.1 1 0 0 1 1 1 1 Fcf1 PIN_4 PF13638.6 gi|150399404|ref|YP_001323171.1| - 3.1e-05 24.3 3.6 0.0073 16.6 3.6 2.1 1 1 0 1 1 1 1 PIN domain PIN PF01850.21 gi|150399404|ref|YP_001323171.1| - 0.0036 17.8 0.4 0.45 11.0 0.4 2.1 1 1 0 1 1 1 1 PIN domain DUF4411 PF14367.6 gi|150399404|ref|YP_001323171.1| - 0.026 14.4 0.5 0.87 9.5 0.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4411) WHIM1 PF15612.6 gi|150399404|ref|YP_001323171.1| - 0.032 13.8 1.3 0.074 12.6 1.3 1.6 1 0 0 1 1 1 0 WSTF, HB1, Itc1p, MBD9 motif 1 5_3_exonuc_N PF02739.16 gi|150399404|ref|YP_001323171.1| - 0.049 13.5 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain Pih1_fungal_CS PF18482.1 gi|150399404|ref|YP_001323171.1| - 0.082 13.4 3.4 1.7 9.3 0.4 2.2 1 1 1 2 2 2 0 Fungal Pih1 CS domain Lactamase_B_2 PF12706.7 gi|150399405|ref|YP_001323172.1| - 3.2e-15 56.2 0.0 6.2e-15 55.3 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|150399405|ref|YP_001323172.1| - 2.4e-07 30.8 0.0 4e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|150399405|ref|YP_001323172.1| - 0.0027 17.7 0.1 0.0047 17.0 0.1 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily DUF3310 PF11753.8 gi|150399405|ref|YP_001323172.1| - 0.033 14.4 0.3 0.17 12.1 0.0 2.2 3 0 0 3 3 3 0 Protein of unknwon function (DUF3310) PrcB_C PF14343.6 gi|150399406|ref|YP_001323173.1| - 0.0015 18.6 0.6 0.0031 17.6 0.6 1.6 1 0 0 1 1 1 1 PrcB C-terminal ComJ PF11033.8 gi|150399406|ref|YP_001323173.1| - 0.046 13.4 0.1 2.4 7.9 0.0 2.2 1 1 0 2 2 2 0 Competence protein J (ComJ) Prenyltransf PF01255.19 gi|150399407|ref|YP_001323174.1| - 7.9e-80 267.6 0.0 9.2e-80 267.4 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase CLTH PF10607.9 gi|150399407|ref|YP_001323174.1| - 0.021 14.7 0.0 0.041 13.8 0.0 1.5 1 1 1 2 2 2 0 CTLH/CRA C-terminal to LisH motif domain CBFD_NFYB_HMF PF00808.23 gi|150399409|ref|YP_001323176.1| - 2e-20 72.8 1.0 2.2e-20 72.7 1.0 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|150399409|ref|YP_001323176.1| - 3.5e-10 40.4 0.4 3.8e-10 40.2 0.4 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 gi|150399409|ref|YP_001323176.1| - 4e-06 26.9 0.1 4.4e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 gi|150399409|ref|YP_001323176.1| - 4.2e-05 23.9 0.1 4.5e-05 23.8 0.1 1.1 1 0 0 1 1 1 1 CENP-S protein TAF PF02969.17 gi|150399409|ref|YP_001323176.1| - 8.3e-05 22.7 1.4 8.7e-05 22.6 1.4 1.0 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID-31kDa PF02291.15 gi|150399409|ref|YP_001323176.1| - 9.1e-05 22.5 0.1 0.0001 22.4 0.1 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID-18kDa PF02269.16 gi|150399409|ref|YP_001323176.1| - 0.0031 17.5 0.0 0.0033 17.4 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit DUF1931 PF09123.11 gi|150399409|ref|YP_001323176.1| - 0.015 15.4 0.5 0.018 15.1 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1931) TFIID_20kDa PF03847.13 gi|150399409|ref|YP_001323176.1| - 0.031 14.8 0.1 0.031 14.8 0.1 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 gi|150399409|ref|YP_001323176.1| - 0.057 13.4 0.1 0.068 13.2 0.1 1.1 1 0 0 1 1 1 0 Bromodomain associated RibD_C PF01872.17 gi|150399410|ref|YP_001323177.1| - 7.2e-60 202.2 0.1 9.6e-60 201.8 0.1 1.2 1 0 0 1 1 1 1 RibD C-terminal domain Toprim_4 PF13662.6 gi|150399410|ref|YP_001323177.1| - 8.8e-06 26.1 0.0 3.5e-05 24.2 0.0 2.1 1 0 0 1 1 1 1 Toprim domain Toprim PF01751.22 gi|150399410|ref|YP_001323177.1| - 0.00011 22.4 0.3 0.0015 18.7 0.1 2.7 2 2 0 2 2 2 1 Toprim domain Toprim_2 PF13155.6 gi|150399410|ref|YP_001323177.1| - 0.00078 19.8 0.0 0.0017 18.8 0.0 1.6 1 0 0 1 1 1 1 Toprim-like PPR_3 PF13812.6 gi|150399410|ref|YP_001323177.1| - 0.035 14.2 0.0 0.15 12.2 0.0 2.0 2 0 0 2 2 2 0 Pentatricopeptide repeat domain NAD_synthase PF02540.17 gi|150399411|ref|YP_001323178.1| - 2.5e-87 292.0 0.0 3e-87 291.7 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|150399411|ref|YP_001323178.1| - 1.3e-06 27.5 0.0 9.6e-05 21.3 0.0 2.2 2 0 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.21 gi|150399411|ref|YP_001323178.1| - 0.00014 21.7 0.0 0.00022 21.0 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.14 gi|150399411|ref|YP_001323178.1| - 0.045 13.3 0.0 0.071 12.7 0.0 1.3 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|150399411|ref|YP_001323178.1| - 0.061 12.8 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC DUF3929 PF13066.6 gi|150399411|ref|YP_001323178.1| - 0.12 12.5 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3929) Radical_SAM PF04055.21 gi|150399412|ref|YP_001323179.1| - 2.4e-24 86.6 0.3 9.8e-24 84.6 0.1 2.1 3 0 0 3 3 3 1 Radical SAM superfamily B12-binding PF02310.19 gi|150399412|ref|YP_001323179.1| - 3.8e-09 36.6 0.0 1.2e-08 35.0 0.0 1.9 1 1 0 1 1 1 1 B12 binding domain Acetyltransf_1 PF00583.25 gi|150399413|ref|YP_001323180.1| - 4.1e-13 49.6 0.0 5.4e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|150399413|ref|YP_001323180.1| - 1.2e-07 31.7 0.0 1.5e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|150399413|ref|YP_001323180.1| - 1.4e-07 31.9 0.0 2e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|150399413|ref|YP_001323180.1| - 0.00066 19.6 0.0 0.00092 19.1 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.6 gi|150399413|ref|YP_001323180.1| - 0.054 13.2 0.0 0.073 12.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|150399413|ref|YP_001323180.1| - 0.086 13.5 0.1 0.13 12.9 0.1 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF1786 PF08735.10 gi|150399413|ref|YP_001323180.1| - 0.087 12.1 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Putative pyruvate format-lyase activating enzyme (DUF1786) Thi4 PF01946.17 gi|150399414|ref|YP_001323181.1| - 1.4e-79 266.7 0.8 1.7e-79 266.4 0.8 1.1 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 gi|150399414|ref|YP_001323181.1| - 7e-11 41.8 3.2 2.2e-06 27.1 0.2 3.0 3 0 0 3 3 3 3 FAD binding domain DAO PF01266.24 gi|150399414|ref|YP_001323181.1| - 1.1e-10 41.6 3.7 3.7e-07 30.1 1.9 2.1 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|150399414|ref|YP_001323181.1| - 6.4e-10 39.0 0.7 1.2e-09 38.1 0.7 1.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|150399414|ref|YP_001323181.1| - 1.8e-09 37.3 1.6 1.2e-08 34.6 1.0 2.0 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|150399414|ref|YP_001323181.1| - 1.8e-08 34.5 0.2 6.2e-08 32.8 0.3 2.0 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|150399414|ref|YP_001323181.1| - 2.2e-07 30.4 1.0 9.9e-07 28.3 0.7 1.9 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|150399414|ref|YP_001323181.1| - 1e-06 27.7 0.1 1e-06 27.7 0.1 1.6 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|150399414|ref|YP_001323181.1| - 4.9e-05 22.7 0.2 0.00058 19.2 0.1 2.2 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|150399414|ref|YP_001323181.1| - 0.00018 22.0 1.5 0.00094 19.7 0.1 2.6 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|150399414|ref|YP_001323181.1| - 0.001 18.3 1.6 0.0013 17.9 0.3 1.7 2 0 0 2 2 2 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|150399414|ref|YP_001323181.1| - 0.0017 17.3 0.2 0.02 13.8 0.1 2.0 2 0 0 2 2 2 1 Tryptophan halogenase Amino_oxidase PF01593.24 gi|150399414|ref|YP_001323181.1| - 0.006 15.9 0.7 0.011 15.0 0.2 1.7 2 1 0 2 2 2 1 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|150399414|ref|YP_001323181.1| - 0.01 14.9 0.1 0.043 12.9 0.0 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|150399414|ref|YP_001323181.1| - 0.019 14.9 0.2 0.037 14.0 0.2 1.5 1 0 0 1 1 1 0 FAD-NAD(P)-binding K_oxygenase PF13434.6 gi|150399414|ref|YP_001323181.1| - 0.044 12.9 0.0 0.063 12.4 0.0 1.2 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) ThiI PF02568.14 gi|150399415|ref|YP_001323182.1| - 1.7e-68 230.1 0.1 2.8e-68 229.4 0.1 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|150399415|ref|YP_001323182.1| - 1.9e-19 70.2 3.7 1.9e-19 70.2 3.7 1.8 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 gi|150399415|ref|YP_001323182.1| - 2.7e-06 27.0 0.1 0.0002 21.0 0.1 2.3 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|150399415|ref|YP_001323182.1| - 6.9e-05 21.8 0.0 0.00012 21.0 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase Ribosomal_L37ae PF01780.19 gi|150399415|ref|YP_001323182.1| - 0.39 10.8 0.1 0.39 10.8 0.1 2.7 3 0 0 3 3 3 0 Ribosomal L37ae protein family Hexapep PF00132.24 gi|150399416|ref|YP_001323183.1| - 2.1e-12 46.2 6.0 6e-11 41.6 3.9 2.4 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|150399416|ref|YP_001323183.1| - 1e-07 31.6 4.7 1.6e-07 31.0 1.9 2.2 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase ATP_bind_3 PF01171.20 gi|150399417|ref|YP_001323184.1| - 1.3e-10 41.4 0.0 2.6e-10 40.4 0.0 1.5 1 1 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.16 gi|150399417|ref|YP_001323184.1| - 1.9e-06 27.0 0.0 2.6e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|150399417|ref|YP_001323184.1| - 2.2e-06 27.0 0.0 6e-06 25.6 0.0 1.7 2 0 0 2 2 2 1 NAD synthase zn-ribbon_14 PF16503.5 gi|150399417|ref|YP_001323184.1| - 9.6e-05 21.8 1.0 9.6e-05 21.8 1.0 3.8 5 0 0 5 5 5 1 Zinc-ribbon PAPS_reduct PF01507.19 gi|150399417|ref|YP_001323184.1| - 0.002 18.2 0.0 0.011 15.8 0.0 2.2 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family RecR PF02132.15 gi|150399417|ref|YP_001323184.1| - 0.002 17.6 0.7 0.002 17.6 0.7 3.6 4 0 0 4 4 4 1 RecR protein TF_Zn_Ribbon PF08271.12 gi|150399417|ref|YP_001323184.1| - 5.3 6.7 14.6 0.19 11.3 1.1 3.7 3 1 0 3 3 3 0 TFIIB zinc-binding ThiS PF02597.20 gi|150399418|ref|YP_001323185.1| - 4e-08 33.8 0.0 4.7e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 ThiS family RL10P_insert PF17777.1 gi|150399418|ref|YP_001323185.1| - 0.016 15.2 0.1 0.03 14.3 0.0 1.4 1 1 0 1 1 1 0 Insertion domain in 60S ribosomal protein L10P Fer4 PF00037.27 gi|150399419|ref|YP_001323186.1| - 2.2e-17 62.1 14.4 2e-09 36.9 4.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399419|ref|YP_001323186.1| - 2.5e-12 46.3 14.9 8.9e-07 28.7 3.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399419|ref|YP_001323186.1| - 7.7e-12 45.2 12.1 1.2e-11 44.6 12.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399419|ref|YP_001323186.1| - 1.6e-11 44.2 19.5 3.9e-08 33.3 11.2 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399419|ref|YP_001323186.1| - 4.1e-11 43.3 9.4 8.8e-11 42.2 9.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399419|ref|YP_001323186.1| - 4.5e-10 40.3 8.1 0.00041 21.2 3.5 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|150399419|ref|YP_001323186.1| - 1.6e-09 37.7 12.6 3.4e-05 23.9 3.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399419|ref|YP_001323186.1| - 2.6e-09 36.6 11.1 3.5e-05 23.6 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain NIL PF09383.10 gi|150399419|ref|YP_001323186.1| - 4e-07 29.8 0.0 6.2e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 NIL domain Fer4_17 PF13534.6 gi|150399419|ref|YP_001323186.1| - 1.2e-06 28.9 5.1 0.014 15.9 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399419|ref|YP_001323186.1| - 3.9e-06 26.9 14.4 0.0035 17.7 2.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399419|ref|YP_001323186.1| - 2.4e-05 24.7 12.3 0.011 16.2 1.3 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399419|ref|YP_001323186.1| - 0.00024 21.3 12.5 0.074 13.3 2.5 2.6 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399419|ref|YP_001323186.1| - 0.00029 21.5 21.1 0.025 15.5 6.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|150399419|ref|YP_001323186.1| - 0.00076 20.0 15.7 0.069 13.7 5.3 2.5 2 1 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|150399419|ref|YP_001323186.1| - 0.013 16.3 11.1 0.22 12.4 1.6 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain ALS_ss_C PF10369.9 gi|150399419|ref|YP_001323186.1| - 0.059 13.6 0.0 0.09 13.0 0.0 1.3 1 0 0 1 1 1 0 Small subunit of acetolactate synthase Fer4_15 PF13459.6 gi|150399419|ref|YP_001323186.1| - 0.075 13.8 17.0 0.14 12.9 4.3 3.2 2 2 1 3 3 3 0 4Fe-4S single cluster domain HcyBio PF01837.16 gi|150399420|ref|YP_001323187.1| - 9.2e-142 472.0 3.3 1.2e-141 471.6 3.3 1.2 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation CBS PF00571.28 gi|150399420|ref|YP_001323187.1| - 6.8e-24 84.1 5.8 1.9e-13 50.6 0.2 3.3 3 0 0 3 3 3 2 CBS domain RNA_pol_Rpb5_C PF01191.19 gi|150399421|ref|YP_001323188.1| - 2.6e-26 91.3 0.1 2.9e-26 91.1 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb2_1 PF04563.15 gi|150399422|ref|YP_001323189.1| - 6e-55 185.9 0.1 7.3e-55 185.6 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|150399422|ref|YP_001323189.1| - 5.2e-30 104.5 0.0 7.5e-30 104.0 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.16 gi|150399422|ref|YP_001323189.1| - 8.7e-28 96.3 0.0 1.9e-27 95.2 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 DUF1002 PF06207.11 gi|150399422|ref|YP_001323189.1| - 0.048 13.2 0.2 0.18 11.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1002) RNA_pol_Rpb2_6 PF00562.28 gi|150399423|ref|YP_001323190.1| - 6.8e-128 427.0 0.0 8.4e-128 426.7 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 gi|150399423|ref|YP_001323190.1| - 1.5e-27 95.8 0.0 3e-27 94.8 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 gi|150399423|ref|YP_001323190.1| - 2.6e-20 72.4 0.0 5.5e-20 71.4 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|150399423|ref|YP_001323190.1| - 1.6e-09 38.2 3.4 6.8e-09 36.2 3.4 2.1 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 5 TF_Zn_Ribbon PF08271.12 gi|150399423|ref|YP_001323190.1| - 0.0045 16.5 2.7 0.043 13.3 2.6 2.3 1 1 1 2 2 2 2 TFIIB zinc-binding Nudix_N_2 PF14803.6 gi|150399423|ref|YP_001323190.1| - 0.031 14.2 0.4 8.9 6.3 0.1 2.5 2 0 0 2 2 2 0 Nudix N-terminal RNA_pol_Rpb2_45 PF10385.9 gi|150399423|ref|YP_001323190.1| - 0.051 13.8 0.3 0.23 11.7 0.2 2.1 2 0 0 2 2 2 0 RNA polymerase beta subunit external 1 domain Zn_Tnp_IS91 PF14319.6 gi|150399423|ref|YP_001323190.1| - 0.13 12.4 0.3 0.23 11.5 0.3 1.3 1 0 0 1 1 1 0 Transposase zinc-binding domain DZR PF12773.7 gi|150399423|ref|YP_001323190.1| - 0.15 12.1 0.3 0.29 11.2 0.3 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|150399423|ref|YP_001323190.1| - 0.19 11.2 2.0 1.9 8.0 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|150399423|ref|YP_001323190.1| - 0.27 11.4 1.4 0.63 10.2 1.4 1.6 1 0 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|150399423|ref|YP_001323190.1| - 0.37 10.6 2.5 2.1 8.1 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Auto_anti-p27 PF06677.12 gi|150399423|ref|YP_001323190.1| - 0.59 10.3 2.0 1.3 9.2 1.2 2.0 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) RNA_pol_Rpb1_1 PF04997.12 gi|150399424|ref|YP_001323191.1| - 2.4e-98 329.3 0.0 4.1e-98 328.6 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|150399424|ref|YP_001323191.1| - 1.3e-69 233.7 0.2 2e-69 233.1 0.2 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|150399424|ref|YP_001323191.1| - 8.8e-30 103.7 0.0 1.8e-29 102.7 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|150399424|ref|YP_001323191.1| - 8.1e-28 96.5 0.0 2.7e-27 94.8 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.17 gi|150399424|ref|YP_001323191.1| - 1e-27 97.3 0.1 6.7e-27 94.6 0.0 2.1 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 5 BING4CT PF08149.11 gi|150399424|ref|YP_001323191.1| - 0.0037 17.0 0.2 0.07 12.9 0.0 3.0 3 0 0 3 3 3 1 BING4CT (NUC141) domain CpXC PF14353.6 gi|150399424|ref|YP_001323191.1| - 0.012 15.7 1.1 0.59 10.2 1.3 2.6 1 1 1 2 2 2 0 CpXC protein MqsA_antitoxin PF15731.5 gi|150399424|ref|YP_001323191.1| - 0.031 14.4 0.8 8.4 6.5 0.0 3.5 3 0 0 3 3 3 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Zn_Tnp_IS1595 PF12760.7 gi|150399424|ref|YP_001323191.1| - 0.66 10.0 0.0 0.66 10.0 0.0 3.1 4 0 0 4 4 3 0 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|150399424|ref|YP_001323191.1| - 1.5 8.4 9.8 2.5 7.6 0.2 3.3 3 0 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|150399424|ref|YP_001323191.1| - 7.7 6.7 9.2 8.2 6.6 0.0 3.4 4 0 0 4 4 4 0 Zinc ribbon domain RNA_pol_Rpb1_5 PF04998.17 gi|150399425|ref|YP_001323192.1| - 1e-55 189.1 2.5 1.5e-55 188.5 2.5 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 PEP-utilisers_N PF05524.13 gi|150399425|ref|YP_001323192.1| - 0.0075 16.4 0.0 1.7 8.8 0.0 2.5 2 0 0 2 2 2 2 PEP-utilising enzyme, N-terminal Ribosomal_L7Ae PF01248.26 gi|150399426|ref|YP_001323193.1| - 2.1e-24 85.1 0.1 2.3e-24 84.9 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FKBP_C PF00254.28 gi|150399426|ref|YP_001323193.1| - 0.07 13.5 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 FKBP-type peptidyl-prolyl cis-trans isomerase KH_5 PF13184.6 gi|150399427|ref|YP_001323194.1| - 2.8e-17 62.6 5.1 6e-17 61.5 0.5 2.3 2 0 0 2 2 2 1 NusA-like KH domain KH_2 PF07650.17 gi|150399427|ref|YP_001323194.1| - 1.6e-13 50.3 6.1 9.4e-12 44.6 0.6 2.2 1 1 1 2 2 2 2 KH domain KH_1 PF00013.29 gi|150399427|ref|YP_001323194.1| - 1.4e-06 28.0 2.9 0.0032 17.3 0.2 2.9 2 1 1 3 3 3 2 KH domain KH_4 PF13083.6 gi|150399427|ref|YP_001323194.1| - 0.0018 18.1 1.4 0.24 11.3 0.5 2.4 2 0 0 2 2 2 2 KH domain Ribosom_S12_S23 PF00164.25 gi|150399428|ref|YP_001323195.1| - 1.4e-47 160.0 1.2 1.7e-47 159.7 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.21 gi|150399429|ref|YP_001323196.1| - 5.7e-36 123.4 4.6 6.8e-36 123.2 4.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e GTP_EFTU PF00009.27 gi|150399430|ref|YP_001323197.1| - 7.9e-64 214.8 0.1 1.4e-63 214.0 0.1 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 gi|150399430|ref|YP_001323197.1| - 2.5e-27 94.7 0.0 1.3e-26 92.4 0.0 2.3 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_IV PF03764.18 gi|150399430|ref|YP_001323197.1| - 2.7e-21 75.6 0.3 9.5e-21 73.8 0.3 2.0 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|150399430|ref|YP_001323197.1| - 7.5e-21 74.0 0.4 2.2e-20 72.5 0.2 2.0 2 0 0 2 2 2 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 gi|150399430|ref|YP_001323197.1| - 8e-13 48.6 0.1 4.1e-12 46.3 0.0 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU PF00009.27 gi|150399431|ref|YP_001323198.1| - 5.3e-51 172.9 0.0 6.4e-51 172.7 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|150399431|ref|YP_001323198.1| - 1.4e-36 125.2 0.6 6.6e-36 123.0 0.1 2.3 3 0 0 3 3 3 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|150399431|ref|YP_001323198.1| - 2.5e-16 59.8 1.7 1.1e-15 57.8 1.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.6 gi|150399431|ref|YP_001323198.1| - 4.4e-07 29.7 1.7 1.1e-06 28.4 1.7 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 4 MMR_HSR1 PF01926.23 gi|150399431|ref|YP_001323198.1| - 1.1e-06 28.7 0.1 5.3e-06 26.5 0.1 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|150399431|ref|YP_001323198.1| - 0.0016 18.0 1.1 0.0092 15.5 0.3 2.4 2 1 0 2 2 2 1 Ferrous iron transport protein B PduV-EutP PF10662.9 gi|150399431|ref|YP_001323198.1| - 0.042 13.6 0.3 0.38 10.5 0.1 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Gtr1_RagA PF04670.12 gi|150399431|ref|YP_001323198.1| - 0.072 12.4 0.1 0.13 11.6 0.1 1.4 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region SRPRB PF09439.10 gi|150399431|ref|YP_001323198.1| - 0.15 11.5 0.1 0.46 9.9 0.1 1.8 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Ribosomal_S10 PF00338.22 gi|150399432|ref|YP_001323199.1| - 1.7e-28 98.7 0.2 1.9e-28 98.5 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 gi|150399432|ref|YP_001323199.1| - 0.026 15.4 0.0 0.045 14.6 0.0 1.4 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain PK PF00224.21 gi|150399432|ref|YP_001323199.1| - 0.048 12.5 0.1 0.05 12.5 0.1 1.0 1 0 0 1 1 1 0 Pyruvate kinase, barrel domain Mrx7 PF10906.8 gi|150399432|ref|YP_001323199.1| - 0.076 13.3 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 MIOREX complex component 7 PGM_PMM_I PF02878.16 gi|150399433|ref|YP_001323200.1| - 1.9e-24 86.0 0.0 3.6e-24 85.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|150399433|ref|YP_001323200.1| - 1.4e-22 80.2 0.3 5.1e-22 78.4 0.1 2.0 2 1 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|150399433|ref|YP_001323200.1| - 1.5e-17 63.8 0.0 2.5e-17 63.1 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|150399433|ref|YP_001323200.1| - 9.4e-10 38.5 0.2 5.3e-09 36.1 0.0 2.2 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF1297 PF06973.12 gi|150399434|ref|YP_001323201.1| - 2.7e-82 274.9 0.0 3.6e-82 274.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|150399434|ref|YP_001323201.1| - 3.5e-47 159.4 0.0 5.1e-47 158.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) RNase_HII PF01351.18 gi|150399435|ref|YP_001323202.1| - 1.2e-51 175.4 0.8 1.4e-51 175.1 0.8 1.1 1 0 0 1 1 1 1 Ribonuclease HII GP24_25 PF17388.2 gi|150399435|ref|YP_001323202.1| - 0.27 11.2 2.5 0.95 9.4 0.6 2.3 2 0 0 2 2 2 0 Tail assembly gene products 24 & 25 GCD14 PF08704.10 gi|150399436|ref|YP_001323203.1| - 7.6e-29 101.1 0.2 5.4e-26 91.8 0.0 2.9 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 gi|150399436|ref|YP_001323203.1| - 4.3e-06 26.6 0.1 9.2e-06 25.6 0.1 1.5 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 gi|150399436|ref|YP_001323203.1| - 0.0021 17.2 0.1 0.003 16.7 0.1 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Rotavirus_VP3 PF06929.11 gi|150399436|ref|YP_001323203.1| - 0.011 14.1 0.1 0.014 13.7 0.1 1.1 1 0 0 1 1 1 0 Rotavirus VP3 protein Ubie_methyltran PF01209.18 gi|150399436|ref|YP_001323203.1| - 0.034 13.5 0.1 0.4 10.0 0.0 2.1 1 1 1 2 2 2 0 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|150399436|ref|YP_001323203.1| - 0.084 12.7 0.0 3.6 7.4 0.0 2.4 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 gi|150399436|ref|YP_001323203.1| - 0.095 13.4 0.0 0.41 11.4 0.0 2.2 1 1 0 1 1 1 0 Methyltransferase domain PspC PF04024.12 gi|150399437|ref|YP_001323204.1| - 1.1e-21 76.4 2.1 1.3e-21 76.1 2.1 1.1 1 0 0 1 1 1 1 PspC domain RSN1_TM PF13967.6 gi|150399437|ref|YP_001323204.1| - 0.0067 16.2 0.0 0.0099 15.6 0.0 1.2 1 0 0 1 1 1 1 Late exocytosis, associated with Golgi transport TMEM154 PF15102.6 gi|150399437|ref|YP_001323204.1| - 0.061 13.2 0.1 0.075 12.9 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF2251 PF10008.9 gi|150399437|ref|YP_001323204.1| - 0.13 12.4 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2251) DUF553 PF04473.12 gi|150399438|ref|YP_001323205.1| - 2.5e-38 131.0 3.7 4.4e-38 130.2 3.7 1.4 1 0 0 1 1 1 1 Transglutaminase-like domain Transglut_core PF01841.19 gi|150399438|ref|YP_001323205.1| - 0.00045 20.7 0.0 0.00088 19.7 0.0 1.5 1 0 0 1 1 1 1 Transglutaminase-like superfamily Thymidylat_synt PF00303.19 gi|150399440|ref|YP_001323207.1| - 4.8e-19 68.5 0.1 5.6e-19 68.3 0.1 1.2 1 0 0 1 1 1 1 Thymidylate synthase Amidohydro_1 PF01979.20 gi|150399441|ref|YP_001323208.1| - 1.2e-41 143.2 0.0 1.4e-41 143.0 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|150399441|ref|YP_001323208.1| - 0.001 18.7 0.0 0.045 13.2 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|150399441|ref|YP_001323208.1| - 0.012 14.9 0.0 0.025 13.9 0.0 1.6 1 1 0 1 1 1 0 Adenosine/AMP deaminase Beta-Casp PF10996.8 gi|150399442|ref|YP_001323209.1| - 2.4e-20 72.9 0.1 5.7e-20 71.7 0.0 1.7 2 0 0 2 2 2 1 Beta-Casp domain Lactamase_B_6 PF16661.5 gi|150399442|ref|YP_001323209.1| - 3.2e-14 52.8 0.7 1e-13 51.1 0.2 2.0 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily domain RMMBL PF07521.12 gi|150399442|ref|YP_001323209.1| - 1.1e-13 50.8 0.0 2.9e-13 49.5 0.0 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|150399442|ref|YP_001323209.1| - 8e-11 42.3 0.0 5.4e-10 39.6 0.0 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|150399442|ref|YP_001323209.1| - 1.3e-08 34.6 0.0 2.2e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|150399442|ref|YP_001323209.1| - 1.1e-05 25.4 0.1 2.4e-05 24.3 0.1 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain NiFeSe_Hases PF00374.19 gi|150399443|ref|YP_001323210.1| - 4.5e-30 105.0 2.0 6.4e-17 61.6 0.1 3.9 1 1 1 4 4 4 4 Nickel-dependent hydrogenase HycI PF01750.18 gi|150399444|ref|YP_001323211.1| - 4.1e-32 110.7 0.9 4.9e-32 110.5 0.9 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease IP_trans PF02121.18 gi|150399444|ref|YP_001323211.1| - 0.16 11.5 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol transfer protein Oxidored_q6 PF01058.22 gi|150399445|ref|YP_001323212.1| - 2.2e-29 101.9 1.9 2.2e-29 101.9 1.9 2.1 2 1 1 3 3 3 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.27 gi|150399445|ref|YP_001323212.1| - 2.1e-11 43.1 19.8 5.9e-08 32.2 1.7 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399445|ref|YP_001323212.1| - 3.3e-07 30.1 19.5 5.6e-05 23.0 2.3 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399445|ref|YP_001323212.1| - 8.2e-07 28.8 11.5 0.00011 22.0 1.8 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399445|ref|YP_001323212.1| - 1.8e-06 28.0 11.2 1.8e-06 28.0 11.2 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399445|ref|YP_001323212.1| - 5.6e-06 26.8 13.5 5.6e-06 26.8 13.5 2.8 2 2 0 2 2 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150399445|ref|YP_001323212.1| - 9.4e-06 26.3 5.0 0.015 16.1 0.2 2.8 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_10 PF13237.6 gi|150399445|ref|YP_001323212.1| - 1.1e-05 25.5 14.4 1.1e-05 25.5 14.4 3.2 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399445|ref|YP_001323212.1| - 7e-05 22.9 12.7 7e-05 22.9 12.7 3.8 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399445|ref|YP_001323212.1| - 0.00019 22.3 11.7 0.0018 19.1 1.2 2.8 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|150399445|ref|YP_001323212.1| - 0.0042 17.5 3.4 0.0042 17.5 3.4 3.7 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|150399445|ref|YP_001323212.1| - 0.0086 16.6 16.6 0.15 12.6 2.1 3.2 3 0 0 3 3 3 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|150399445|ref|YP_001323212.1| - 0.075 13.5 1.9 0.075 13.5 1.9 2.9 3 1 1 4 4 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399445|ref|YP_001323212.1| - 0.22 12.1 20.3 0.13 12.8 2.8 3.0 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150399445|ref|YP_001323212.1| - 4.5 8.2 20.5 1.1 10.2 4.9 3.0 3 0 0 3 3 3 0 4Fe-4S dicluster domain FrhB_FdhB_C PF04432.13 gi|150399446|ref|YP_001323213.1| - 1.2e-42 145.3 0.1 1.7e-42 144.9 0.1 1.2 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|150399446|ref|YP_001323213.1| - 4.6e-26 90.8 0.2 8.1e-26 90.0 0.2 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term DUF389 PF04087.14 gi|150399447|ref|YP_001323214.1| - 1.6e-27 96.3 19.4 2.9e-27 95.5 19.4 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF389) MgtC PF02308.16 gi|150399447|ref|YP_001323214.1| - 0.012 15.9 5.1 0.015 15.7 4.1 1.7 1 1 0 1 1 1 0 MgtC family Memo PF01875.17 gi|150399448|ref|YP_001323215.1| - 2.2e-83 279.5 0.2 2.5e-83 279.4 0.2 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.18 gi|150399448|ref|YP_001323215.1| - 0.016 14.3 0.0 0.021 13.9 0.0 1.2 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase PTS_IIB PF02302.17 gi|150399448|ref|YP_001323215.1| - 0.096 13.4 0.9 0.6 10.8 1.2 2.1 2 0 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit LeuA_dimer PF08502.10 gi|150399448|ref|YP_001323215.1| - 0.11 12.5 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 LeuA allosteric (dimerisation) domain Thioredoxin_3 PF13192.6 gi|150399449|ref|YP_001323216.1| - 1.8e-17 63.1 0.5 2e-17 63.0 0.5 1.0 1 0 0 1 1 1 1 Thioredoxin domain Anticodon_1 PF08264.13 gi|150399449|ref|YP_001323216.1| - 0.018 15.0 0.1 0.023 14.7 0.1 1.2 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA HMA PF00403.26 gi|150399449|ref|YP_001323216.1| - 0.041 14.3 1.6 0.054 13.9 0.6 1.8 2 1 0 2 2 2 0 Heavy-metal-associated domain Type2_restr_D3 PF16902.5 gi|150399449|ref|YP_001323216.1| - 0.078 12.9 0.3 0.79 9.7 0.1 2.0 2 0 0 2 2 2 0 Type-2 restriction enzyme D3 domain MFS_1 PF07690.16 gi|150399450|ref|YP_001323217.1| - 2.1e-11 43.4 42.2 1.9e-09 36.9 28.5 2.6 1 1 1 2 2 2 2 Major Facilitator Superfamily ArsP_1 PF03773.13 gi|150399451|ref|YP_001323218.1| - 3.6e-83 279.1 27.3 4.8e-83 278.7 27.3 1.0 1 0 0 1 1 1 1 Predicted permease zinc_ribbon_2 PF13240.6 gi|150399452|ref|YP_001323219.1| - 0.0088 15.7 7.8 0.48 10.2 2.0 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zf_UBZ PF18439.1 gi|150399452|ref|YP_001323219.1| - 0.021 14.4 3.1 0.62 9.7 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 gi|150399452|ref|YP_001323219.1| - 0.023 14.1 4.6 0.029 13.8 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc-ribbons_6 PF07191.12 gi|150399452|ref|YP_001323219.1| - 0.032 14.2 7.6 0.043 13.8 7.0 1.6 1 1 0 1 1 1 0 zinc-ribbons Nudix_N_2 PF14803.6 gi|150399452|ref|YP_001323219.1| - 0.033 14.1 3.3 0.78 9.7 0.8 2.3 2 0 0 2 2 2 0 Nudix N-terminal DZR PF12773.7 gi|150399452|ref|YP_001323219.1| - 0.039 14.0 6.2 0.18 11.9 6.2 1.9 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_5 PF13719.6 gi|150399452|ref|YP_001323219.1| - 0.052 13.3 6.5 0.47 10.3 0.1 2.3 2 1 0 2 2 2 0 zinc-ribbon domain DpnI PF06044.12 gi|150399452|ref|YP_001323219.1| - 0.08 12.6 1.4 0.08 12.6 1.4 1.1 1 0 0 1 1 1 0 Dam-replacing family PolC_DP2 PF03833.13 gi|150399452|ref|YP_001323219.1| - 0.15 9.9 2.3 0.16 9.8 2.3 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 CpXC PF14353.6 gi|150399452|ref|YP_001323219.1| - 0.17 11.9 3.6 0.32 11.0 0.8 1.9 1 1 1 2 2 2 0 CpXC protein OrfB_Zn_ribbon PF07282.11 gi|150399452|ref|YP_001323219.1| - 0.26 11.2 4.6 0.46 10.4 4.6 1.4 1 1 0 1 1 1 0 Putative transposase DNA-binding domain DUF2614 PF11023.8 gi|150399452|ref|YP_001323219.1| - 1.9 8.6 5.3 6.8 6.8 5.3 1.8 1 1 0 1 1 1 0 Zinc-ribbon containing domain YacG PF03884.14 gi|150399452|ref|YP_001323219.1| - 2.3 8.0 8.7 9.2 6.1 8.6 1.9 1 1 0 1 1 1 0 DNA gyrase inhibitor YacG Semialdhyde_dhC PF02774.18 gi|150399453|ref|YP_001323220.1| - 4.1e-38 131.3 0.0 5.7e-38 130.8 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|150399453|ref|YP_001323220.1| - 9.4e-36 122.9 0.0 1.5e-35 122.3 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_C PF02800.20 gi|150399453|ref|YP_001323220.1| - 0.0002 21.0 0.0 0.0086 15.7 0.0 2.3 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|150399453|ref|YP_001323220.1| - 0.00088 19.4 0.0 0.0018 18.4 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 gi|150399453|ref|YP_001323220.1| - 0.0064 17.3 0.0 0.014 16.2 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DXP_reductoisom PF02670.16 gi|150399453|ref|YP_001323220.1| - 0.0066 17.2 0.0 0.014 16.1 0.0 1.6 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase NAD_binding_10 PF13460.6 gi|150399453|ref|YP_001323220.1| - 0.075 12.9 0.0 0.22 11.4 0.0 1.8 1 1 0 1 1 1 0 NAD(P)H-binding RtcB PF01139.17 gi|150399454|ref|YP_001323221.1| - 1.3e-178 594.4 1.1 1.5e-178 594.2 1.1 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB DUF371 PF04027.13 gi|150399455|ref|YP_001323222.1| - 2e-50 170.2 1.3 2.2e-50 170.1 1.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) DHquinase_I PF01487.15 gi|150399456|ref|YP_001323223.1| - 3.5e-60 204.1 0.1 4e-60 203.9 0.1 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase TgMIC1 PF11476.8 gi|150399456|ref|YP_001323223.1| - 0.15 11.8 0.0 0.38 10.5 0.0 1.6 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 Helicase_C PF00271.31 gi|150399457|ref|YP_001323224.1| - 2.4e-24 85.8 9.5 7.2e-23 81.0 0.2 4.2 4 0 0 4 4 4 2 Helicase conserved C-terminal domain ERCC4 PF02732.15 gi|150399457|ref|YP_001323224.1| - 5.8e-23 81.8 1.6 2.7e-22 79.7 0.6 2.5 2 0 0 2 2 2 1 ERCC4 domain ResIII PF04851.15 gi|150399457|ref|YP_001323224.1| - 7.8e-19 68.3 0.1 7.8e-19 68.3 0.1 3.7 4 1 0 4 4 4 2 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|150399457|ref|YP_001323224.1| - 1.4e-17 64.0 1.1 4.5e-17 62.4 0.1 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase HHH_5 PF14520.6 gi|150399457|ref|YP_001323224.1| - 3.2e-10 40.5 0.2 1.2e-09 38.7 0.2 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|150399457|ref|YP_001323224.1| - 5.7e-09 35.9 0.0 2.4e-08 34.0 0.0 2.1 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|150399457|ref|YP_001323224.1| - 8.1e-08 31.8 0.3 7.1e-05 22.5 0.2 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|150399457|ref|YP_001323224.1| - 0.004 17.4 2.8 0.72 10.2 0.1 4.4 3 1 0 3 3 3 1 Helix-hairpin-helix motif HHH_8 PF14716.6 gi|150399457|ref|YP_001323224.1| - 0.012 16.0 1.2 0.16 12.3 0.3 3.1 1 1 1 2 2 2 0 Helix-hairpin-helix domain Polysacc_deac_1 PF01522.21 gi|150399457|ref|YP_001323224.1| - 0.016 15.1 0.1 0.49 10.3 0.0 2.9 3 0 0 3 3 3 0 Polysaccharide deacetylase Helicase_RecD PF05127.14 gi|150399457|ref|YP_001323224.1| - 0.057 13.3 4.4 0.27 11.1 0.0 3.8 4 1 1 5 5 5 0 Helicase DXP_reductoisom PF02670.16 gi|150399457|ref|YP_001323224.1| - 0.3 11.8 2.3 5.3 7.8 0.0 3.3 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Aminotran_1_2 PF00155.21 gi|150399458|ref|YP_001323225.1| - 2.6e-36 125.5 0.0 3.5e-36 125.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|150399458|ref|YP_001323225.1| - 0.052 12.8 0.0 0.097 11.9 0.0 1.4 1 0 0 1 1 1 0 Beta-eliminating lyase SMC_N PF02463.19 gi|150399459|ref|YP_001323226.1| - 3.3e-51 173.8 59.4 1.9e-50 171.4 59.4 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|150399459|ref|YP_001323226.1| - 1.2e-30 106.1 0.0 3.7e-30 104.6 0.0 1.9 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_23 PF13476.6 gi|150399459|ref|YP_001323226.1| - 3.1e-15 57.2 22.1 3.1e-15 57.2 22.1 6.6 2 2 3 5 5 2 1 AAA domain AAA_21 PF13304.6 gi|150399459|ref|YP_001323226.1| - 3.2e-08 33.7 39.9 7.1e-07 29.3 12.3 5.3 3 2 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|150399459|ref|YP_001323226.1| - 3.6e-07 29.8 0.1 7.4e-07 28.8 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|150399459|ref|YP_001323226.1| - 1.6e-06 28.1 36.1 1.6e-06 28.1 36.1 4.6 2 2 2 4 4 2 2 AAA ATPase domain BRE1 PF08647.11 gi|150399459|ref|YP_001323226.1| - 0.0015 18.5 16.8 0.0015 18.5 16.8 10.7 4 4 6 11 11 10 1 BRE1 E3 ubiquitin ligase ABC_tran PF00005.27 gi|150399459|ref|YP_001323226.1| - 0.078 13.5 0.1 0.078 13.5 0.1 5.8 3 2 1 4 4 2 0 ABC transporter AAA_27 PF13514.6 gi|150399459|ref|YP_001323226.1| - 0.082 12.5 0.1 0.082 12.5 0.1 3.7 5 0 0 5 5 5 0 AAA domain SpecificRecomb PF10136.9 gi|150399459|ref|YP_001323226.1| - 4.8 5.4 6.3 11 4.2 1.5 2.4 2 0 0 2 2 2 0 Site-specific recombinase Spc7 PF08317.11 gi|150399459|ref|YP_001323226.1| - 6.4 5.6 120.3 0.2 10.5 7.0 7.2 2 2 4 7 7 7 0 Spc7 kinetochore protein Peptidase_M20 PF01546.28 gi|150399460|ref|YP_001323227.1| - 3.2e-31 108.7 0.0 3.9e-31 108.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|150399460|ref|YP_001323227.1| - 2.7e-16 59.4 0.0 1.1e-15 57.4 0.0 2.0 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|150399460|ref|YP_001323227.1| - 0.0014 18.3 0.0 0.0022 17.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M28 AA_kinase PF00696.28 gi|150399461|ref|YP_001323228.1| - 3.6e-19 69.3 0.3 1.6e-13 50.8 0.0 2.3 1 1 0 2 2 2 2 Amino acid kinase family DUF1610 PF07754.11 gi|150399462|ref|YP_001323229.1| - 8.2e-13 48.1 4.9 8.2e-13 48.1 4.9 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1610) zinc_ribbon_2 PF13240.6 gi|150399462|ref|YP_001323229.1| - 0.0014 18.2 18.3 0.014 15.1 4.9 3.7 2 2 0 2 2 2 1 zinc-ribbon domain HypA PF01155.19 gi|150399462|ref|YP_001323229.1| - 0.0079 16.2 12.7 0.0087 16.1 2.2 2.0 1 1 1 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-CHY PF05495.12 gi|150399462|ref|YP_001323229.1| - 0.0079 16.7 11.6 0.021 15.3 11.6 1.6 1 1 0 1 1 1 1 CHY zinc finger DZR PF12773.7 gi|150399462|ref|YP_001323229.1| - 0.0084 16.1 13.6 0.15 12.1 13.3 2.2 1 1 0 1 1 1 1 Double zinc ribbon Elf1 PF05129.13 gi|150399462|ref|YP_001323229.1| - 0.016 15.3 9.9 0.85 9.7 10.0 2.7 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like PhnA_Zn_Ribbon PF08274.12 gi|150399462|ref|YP_001323229.1| - 0.017 15.0 11.8 1.2 9.2 2.1 3.6 3 1 0 3 3 3 0 PhnA Zinc-Ribbon NOB1_Zn_bind PF08772.11 gi|150399462|ref|YP_001323229.1| - 0.025 14.8 6.3 0.025 14.8 6.3 2.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zinc-ribbons_6 PF07191.12 gi|150399462|ref|YP_001323229.1| - 0.048 13.6 11.1 0.35 10.9 11.1 2.0 1 1 0 1 1 1 0 zinc-ribbons Zn-ribbon_8 PF09723.10 gi|150399462|ref|YP_001323229.1| - 0.12 12.5 15.0 0.11 12.7 4.9 2.9 1 1 1 2 2 2 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|150399462|ref|YP_001323229.1| - 0.23 11.4 11.9 0.12 12.3 1.6 2.7 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Prok-RING_1 PF14446.6 gi|150399462|ref|YP_001323229.1| - 0.24 11.4 12.6 0.87 9.6 6.4 2.8 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 NMDAR2_C PF10565.9 gi|150399462|ref|YP_001323229.1| - 0.3 9.9 4.8 0.33 9.8 4.8 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus zf_UBZ PF18439.1 gi|150399462|ref|YP_001323229.1| - 0.4 10.3 15.0 3.5 7.3 0.1 3.9 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger zinc_ribbon_4 PF13717.6 gi|150399462|ref|YP_001323229.1| - 0.43 10.6 17.0 4.9 7.2 1.4 3.8 2 1 1 3 3 3 0 zinc-ribbon domain Anti-TRAP PF15777.5 gi|150399462|ref|YP_001323229.1| - 0.6 10.1 13.2 0.064 13.2 6.0 2.1 1 1 1 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-H2C2_2 PF13465.6 gi|150399462|ref|YP_001323229.1| - 0.98 10.0 16.4 2.1 8.9 0.4 3.8 3 1 1 4 4 4 0 Zinc-finger double domain DUF2072 PF09845.9 gi|150399462|ref|YP_001323229.1| - 1 9.6 10.3 0.18 12.1 4.3 2.0 1 1 1 2 2 2 0 Zn-ribbon containing protein zf-HIT PF04438.16 gi|150399462|ref|YP_001323229.1| - 1.2 9.1 17.6 13 5.8 1.5 3.2 2 1 1 3 3 3 0 HIT zinc finger DUF1272 PF06906.11 gi|150399462|ref|YP_001323229.1| - 1.2 9.2 16.5 54 4.0 16.5 3.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) zf-Mss51 PF13824.6 gi|150399462|ref|YP_001323229.1| - 1.4 9.1 10.6 1.2 9.3 1.2 2.3 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-C3HC4_3 PF13920.6 gi|150399462|ref|YP_001323229.1| - 1.6 8.7 15.2 51 3.8 15.2 2.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 gi|150399462|ref|YP_001323229.1| - 1.8 8.5 11.9 48 3.9 11.9 2.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 gi|150399462|ref|YP_001323229.1| - 2.5 8.1 14.0 2.3e+02 1.8 13.8 2.7 1 1 0 1 1 1 0 zinc-RING finger domain Zn_Tnp_IS1595 PF12760.7 gi|150399462|ref|YP_001323229.1| - 3 7.9 16.5 1.5 8.9 11.0 3.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain PolC_DP2 PF03833.13 gi|150399462|ref|YP_001323229.1| - 3 5.6 8.8 3.4 5.4 8.8 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DpnI PF06044.12 gi|150399462|ref|YP_001323229.1| - 3.2 7.4 5.7 4 7.0 5.7 1.3 1 1 0 1 1 1 0 Dam-replacing family Ribosomal_L37ae PF01780.19 gi|150399462|ref|YP_001323229.1| - 3.6 7.8 8.8 3.2 7.9 3.2 2.9 1 1 1 2 2 2 0 Ribosomal L37ae protein family Zn_Tnp_IS91 PF14319.6 gi|150399462|ref|YP_001323229.1| - 4 7.6 10.8 0.8 9.8 1.5 2.2 1 1 0 1 1 1 0 Transposase zinc-binding domain Dynactin_p62 PF05502.13 gi|150399462|ref|YP_001323229.1| - 4.3 6.0 9.6 4.4 6.0 9.6 1.0 1 0 0 1 1 1 0 Dynactin p62 family TF_Zn_Ribbon PF08271.12 gi|150399462|ref|YP_001323229.1| - 5 6.7 16.8 0.14 11.7 2.9 2.9 2 1 1 3 3 3 0 TFIIB zinc-binding DUF35_N PF12172.8 gi|150399462|ref|YP_001323229.1| - 6.1 6.8 13.7 0.74 9.8 1.4 3.7 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-MYND PF01753.18 gi|150399462|ref|YP_001323229.1| - 6.1 7.0 14.4 2.1 8.5 7.5 2.6 1 1 1 2 2 2 0 MYND finger zf-C2H2 PF00096.26 gi|150399462|ref|YP_001323229.1| - 6.3 7.5 13.6 21 5.8 0.5 3.9 4 0 0 4 4 4 0 Zinc finger, C2H2 type zf-C3HC4_4 PF15227.6 gi|150399462|ref|YP_001323229.1| - 6.7 7.0 12.5 0.49 10.6 2.0 2.4 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING DNA_ligase_ZBD PF03119.16 gi|150399462|ref|YP_001323229.1| - 6.8 6.8 12.9 1.6 8.8 0.7 3.1 2 1 1 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain DiS_P_DiS PF06750.13 gi|150399462|ref|YP_001323229.1| - 6.8 6.9 10.4 10 6.3 2.3 2.7 1 1 2 3 3 3 0 Bacterial Peptidase A24 N-terminal domain RecR PF02132.15 gi|150399462|ref|YP_001323229.1| - 7 6.3 14.9 0.077 12.6 2.3 2.7 1 1 1 2 2 2 0 RecR protein Rubredoxin PF00301.20 gi|150399462|ref|YP_001323229.1| - 7.5 6.7 14.5 6.9 6.8 0.3 3.4 1 1 1 3 3 3 0 Rubredoxin zf-RING_7 PF02591.15 gi|150399462|ref|YP_001323229.1| - 9 6.6 17.8 14 6.0 0.4 4.0 1 1 2 3 3 3 0 C4-type zinc ribbon domain zf-NADH-PPase PF09297.11 gi|150399462|ref|YP_001323229.1| - 9.2 6.0 11.5 13 5.6 0.1 3.7 4 0 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain zf-C6H2 PF15801.5 gi|150399462|ref|YP_001323229.1| - 9.5 6.6 13.1 15 6.0 1.9 2.9 1 1 2 3 3 3 0 zf-MYND-like zinc finger, mRNA-binding EF1_GNE PF00736.19 gi|150399463|ref|YP_001323230.1| - 6.6e-14 51.9 0.6 7.7e-14 51.6 0.6 1.1 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain Ribosomal_L22 PF00237.19 gi|150399465|ref|YP_001323232.1| - 3.4e-28 97.9 0.2 4.7e-28 97.4 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.20 gi|150399466|ref|YP_001323233.1| - 3e-23 82.1 1.5 6e-23 81.2 1.5 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|150399466|ref|YP_001323233.1| - 1.7e-11 43.8 0.5 8.2e-11 41.6 0.1 2.1 2 0 0 2 2 2 1 KH domain KH_1 PF00013.29 gi|150399466|ref|YP_001323233.1| - 0.00065 19.5 0.6 0.013 15.3 0.0 2.4 2 0 0 2 2 2 1 KH domain KH_4 PF13083.6 gi|150399466|ref|YP_001323233.1| - 0.089 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 KH domain AIRS PF00586.24 gi|150399466|ref|YP_001323233.1| - 0.12 13.0 0.0 0.2 12.3 0.0 1.4 1 0 0 1 1 1 0 AIR synthase related protein, N-terminal domain Ribosomal_L29 PF00831.23 gi|150399467|ref|YP_001323234.1| - 1.3e-21 76.3 0.3 1.5e-21 76.1 0.3 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein DUF1192 PF06698.11 gi|150399467|ref|YP_001323234.1| - 0.058 13.5 0.4 0.058 13.5 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) SUI1 PF01253.22 gi|150399468|ref|YP_001323235.1| - 9.5e-22 77.3 0.8 1.2e-21 77.0 0.8 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.15 gi|150399468|ref|YP_001323235.1| - 0.005 16.6 0.7 0.0073 16.0 0.7 1.2 1 0 0 1 1 1 1 DTW domain Img2 PF05046.14 gi|150399468|ref|YP_001323235.1| - 0.018 15.3 0.2 0.025 14.9 0.2 1.3 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) UPF0086 PF01868.16 gi|150399469|ref|YP_001323236.1| - 9.5e-23 79.9 0.1 1.1e-22 79.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Myosin_N PF02736.19 gi|150399469|ref|YP_001323236.1| - 0.05 13.5 0.2 0.077 12.8 0.2 1.3 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain Ribosomal_S17 PF00366.20 gi|150399470|ref|YP_001323237.1| - 6.6e-23 80.6 2.2 8.3e-23 80.3 2.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|150399470|ref|YP_001323237.1| - 0.0023 18.3 0.0 0.0045 17.3 0.0 1.5 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal Ribosomal_L14 PF00238.19 gi|150399471|ref|YP_001323238.1| - 1.4e-33 115.6 0.1 1.8e-33 115.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e LpxD PF04613.14 gi|150399471|ref|YP_001323238.1| - 0.12 12.2 0.0 0.4 10.5 0.0 1.8 1 1 1 2 2 2 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Ribosomal_L26 PF16906.5 gi|150399472|ref|YP_001323239.1| - 7.3e-28 96.9 0.5 9e-28 96.6 0.5 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|150399472|ref|YP_001323239.1| - 1.3e-07 31.3 0.9 2.9e-07 30.2 0.9 1.6 1 0 0 1 1 1 1 KOW motif SH3_2 PF07653.17 gi|150399472|ref|YP_001323239.1| - 0.0076 15.9 0.1 0.012 15.3 0.1 1.3 1 0 0 1 1 1 1 Variant SH3 domain hSH3 PF14603.6 gi|150399472|ref|YP_001323239.1| - 0.06 13.8 0.2 0.19 12.2 0.2 1.9 1 1 1 2 2 2 0 Helically-extended SH3 domain Ribosomal_S4e PF00900.20 gi|150399473|ref|YP_001323240.1| - 1.7e-21 75.9 1.1 2.2e-21 75.5 0.3 1.6 2 0 0 2 2 2 1 Ribosomal family S4e RS4NT PF08071.12 gi|150399473|ref|YP_001323240.1| - 1.9e-19 69.5 2.8 3.2e-19 68.8 2.8 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 gi|150399473|ref|YP_001323240.1| - 3e-08 33.2 0.5 3.2e-07 29.9 0.0 2.4 2 0 0 2 2 2 1 S4 domain KOW PF00467.29 gi|150399473|ref|YP_001323240.1| - 6.4e-05 22.8 0.2 0.0002 21.2 0.2 1.9 1 0 0 1 1 1 1 KOW motif Ribosomal_L5_C PF00673.21 gi|150399474|ref|YP_001323241.1| - 4.1e-23 81.4 0.0 1e-22 80.1 0.0 1.7 2 0 0 2 2 2 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|150399474|ref|YP_001323241.1| - 2.9e-18 66.0 0.1 4.8e-18 65.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 gi|150399475|ref|YP_001323242.1| - 3.6e-13 49.0 1.8 3.8e-13 49.0 1.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e DZR PF12773.7 gi|150399475|ref|YP_001323242.1| - 0.0066 16.5 0.2 0.0086 16.1 0.2 1.2 1 0 0 1 1 1 1 Double zinc ribbon Prim_Zn_Ribbon PF08273.12 gi|150399475|ref|YP_001323242.1| - 0.01 16.1 2.0 0.056 13.7 0.4 2.1 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase DUF1289 PF06945.13 gi|150399475|ref|YP_001323242.1| - 0.023 14.5 0.9 2.4 8.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1289) Ribosomal_S8 PF00410.19 gi|150399476|ref|YP_001323243.1| - 1.8e-25 89.3 0.0 2.4e-25 88.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.23 gi|150399477|ref|YP_001323244.1| - 3.4e-27 94.9 13.4 5.9e-15 55.7 3.7 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 PhnA PF03831.14 gi|150399477|ref|YP_001323244.1| - 0.0037 17.1 0.8 0.01 15.7 0.2 2.0 2 0 0 2 2 2 1 PhnA domain DUF4115 PF13464.6 gi|150399477|ref|YP_001323244.1| - 0.065 13.4 1.8 7.2 6.9 0.1 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4115) HSP20 PF00011.21 gi|150399477|ref|YP_001323244.1| - 0.11 12.6 5.4 13 6.0 0.1 3.3 2 1 1 3 3 3 0 Hsp20/alpha crystallin family DUF348 PF03990.14 gi|150399477|ref|YP_001323244.1| - 0.74 9.6 3.4 19 5.1 0.4 2.6 2 0 0 2 2 2 0 G5-linked-Ubiquitin-like domain Ribosomal_L32e PF01655.18 gi|150399478|ref|YP_001323245.1| - 8.4e-34 116.2 0.1 1.1e-33 115.9 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L19e PF01280.20 gi|150399479|ref|YP_001323246.1| - 2.2e-55 186.7 9.0 2.4e-55 186.5 9.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e baeRF_family12 PF18856.1 gi|150399479|ref|YP_001323246.1| - 0.035 14.7 0.3 0.064 13.8 0.3 1.4 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 12 Ribosomal_L5e PF17144.4 gi|150399480|ref|YP_001323247.1| - 1e-28 100.4 1.3 5.2e-18 65.6 0.0 2.9 2 1 1 3 3 3 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 gi|150399480|ref|YP_001323247.1| - 3.5e-10 40.7 0.3 5.6e-10 40.0 0.3 1.3 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Ribosomal_L18p PF00861.22 gi|150399480|ref|YP_001323247.1| - 7e-06 26.4 0.0 9.1e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_S5 PF00333.20 gi|150399481|ref|YP_001323248.1| - 2.7e-26 91.3 4.0 3.2e-26 91.1 2.9 1.8 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|150399481|ref|YP_001323248.1| - 1.3e-23 82.2 0.0 2e-23 81.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.20 gi|150399482|ref|YP_001323249.1| - 6.2e-16 58.0 0.1 1.2e-15 57.2 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L27A PF00828.19 gi|150399483|ref|YP_001323250.1| - 1.8e-23 83.6 1.2 2.4e-23 83.2 1.2 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 gi|150399483|ref|YP_001323250.1| - 0.018 14.5 0.0 0.027 13.8 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e DUF4542 PF15075.6 gi|150399483|ref|YP_001323250.1| - 0.16 12.3 1.0 0.23 11.8 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4542) SecY PF00344.20 gi|150399484|ref|YP_001323251.1| - 6e-66 222.8 22.4 7.9e-66 222.4 22.4 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|150399484|ref|YP_001323251.1| - 0.0094 15.8 1.4 0.091 12.6 0.2 3.1 3 0 0 3 3 3 1 Plug domain of Sec61p Glycos_transf_4 PF00953.21 gi|150399485|ref|YP_001323252.1| - 1.2e-24 87.2 18.0 1.2e-24 87.2 18.0 2.5 2 1 0 2 2 2 1 Glycosyl transferase family 4 Phage_holin_5_2 PF16079.5 gi|150399485|ref|YP_001323252.1| - 1.6 9.1 13.4 4.2 7.8 1.0 3.8 2 1 1 3 3 3 0 Phage holin family Hol44, in holin superfamily V STT3 PF02516.14 gi|150399486|ref|YP_001323253.1| - 4.1e-90 303.0 29.1 6e-90 302.5 29.1 1.2 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit Trm56 PF01994.16 gi|150399487|ref|YP_001323254.1| - 1.3e-49 167.1 0.1 1.8e-49 166.6 0.1 1.2 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SPOUT_MTase_2 PF14419.6 gi|150399487|ref|YP_001323254.1| - 0.0001 21.7 0.0 0.00014 21.3 0.0 1.2 1 0 0 1 1 1 1 AF2226-like SPOUT RNA Methylase fused to THUMP Methyltrn_RNA_4 PF09936.9 gi|150399487|ref|YP_001323254.1| - 0.035 14.0 0.0 0.23 11.3 0.0 2.1 1 1 0 1 1 1 0 SAM-dependent RNA methyltransferase DUF531 PF04407.12 gi|150399487|ref|YP_001323254.1| - 0.085 12.9 0.0 0.15 12.2 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF531) dUTPase PF00692.19 gi|150399488|ref|YP_001323255.1| - 1.8e-07 30.9 0.0 4e-07 29.8 0.0 1.6 1 1 0 1 1 1 1 dUTPase DCD PF06559.11 gi|150399488|ref|YP_001323255.1| - 6.6e-07 28.4 0.0 8.6e-05 21.5 0.0 2.7 1 1 1 2 2 2 2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DUF711 PF05167.12 gi|150399489|ref|YP_001323256.1| - 1.3e-173 577.6 6.9 1.6e-173 577.3 6.9 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) HTH_19 PF12844.7 gi|150399489|ref|YP_001323256.1| - 0.16 12.0 0.0 0.7 10.0 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Pneumo_M2 PF07380.11 gi|150399489|ref|YP_001323256.1| - 0.36 11.1 0.8 50 4.3 0.0 2.8 3 0 0 3 3 3 0 Pneumovirus M2 protein Sec61_beta PF03911.16 gi|150399490|ref|YP_001323257.1| - 6e-14 51.8 0.6 7.1e-14 51.6 0.6 1.1 1 0 0 1 1 1 1 Sec61beta family TFIIS_C PF01096.18 gi|150399491|ref|YP_001323258.1| - 3.9e-18 65.0 8.3 3.9e-18 65.0 8.3 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|150399491|ref|YP_001323258.1| - 1.3e-09 37.8 1.5 1.3e-09 37.8 1.5 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.7 gi|150399491|ref|YP_001323258.1| - 0.0014 18.6 4.0 0.0014 18.6 4.0 2.6 2 1 0 2 2 2 1 Transposase zinc-ribbon domain DUF2752 PF10825.8 gi|150399491|ref|YP_001323258.1| - 0.0097 15.9 0.1 0.0097 15.9 0.1 1.7 2 0 0 2 2 1 1 Protein of unknown function (DUF2752) DUF1283 PF06932.11 gi|150399491|ref|YP_001323258.1| - 0.018 15.3 0.8 0.024 14.8 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) FAM183 PF14886.6 gi|150399491|ref|YP_001323258.1| - 0.021 15.6 0.3 0.023 15.4 0.3 1.1 1 0 0 1 1 1 0 FAM183A and FAM183B related zinc-ribbons_6 PF07191.12 gi|150399491|ref|YP_001323258.1| - 0.03 14.3 1.2 0.03 14.3 1.2 2.8 1 1 1 2 2 2 0 zinc-ribbons Mob_synth_C PF06463.13 gi|150399491|ref|YP_001323258.1| - 0.051 13.5 1.1 0.061 13.3 0.2 1.6 1 1 0 1 1 1 0 Molybdenum Cofactor Synthesis C Auto_anti-p27 PF06677.12 gi|150399491|ref|YP_001323258.1| - 0.062 13.5 4.2 0.062 13.5 4.2 2.8 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_4 PF13717.6 gi|150399491|ref|YP_001323258.1| - 0.067 13.1 21.9 0.2 11.6 0.6 4.8 4 1 0 4 4 4 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|150399491|ref|YP_001323258.1| - 0.072 13.0 11.6 0.6 10.1 4.0 2.5 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|150399491|ref|YP_001323258.1| - 0.076 12.5 11.4 0.99 8.9 0.2 3.8 4 0 0 4 4 4 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|150399491|ref|YP_001323258.1| - 0.14 12.3 11.3 2.3 8.4 0.1 4.1 4 0 0 4 4 4 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|150399491|ref|YP_001323258.1| - 0.15 11.6 11.5 12 5.5 0.1 4.3 4 0 0 4 4 4 0 TFIIB zinc-binding DZR PF12773.7 gi|150399491|ref|YP_001323258.1| - 0.23 11.5 11.9 0.59 10.2 0.7 3.1 2 1 0 2 2 2 0 Double zinc ribbon VP_N-CPKC PF11475.8 gi|150399491|ref|YP_001323258.1| - 0.26 11.2 5.6 19 5.3 0.1 3.4 3 0 0 3 3 3 0 Virion protein N terminal domain TackOD1 PF18551.1 gi|150399491|ref|YP_001323258.1| - 0.36 10.5 10.9 18 4.9 11.0 2.7 1 1 0 1 1 1 0 Thaumarchaeal output domain 1 TerY_C PF15616.6 gi|150399491|ref|YP_001323258.1| - 0.44 10.6 8.9 0.072 13.2 1.1 2.1 1 1 1 2 2 2 0 TerY-C metal binding domain DUF2387 PF09526.10 gi|150399491|ref|YP_001323258.1| - 1.2 9.4 14.3 4.5 7.5 1.9 2.8 1 1 0 2 2 2 0 Probable metal-binding protein (DUF2387) zf-FPG_IleRS PF06827.14 gi|150399491|ref|YP_001323258.1| - 2.4 8.1 10.8 9.2 6.2 0.0 4.2 4 0 0 4 4 4 0 Zinc finger found in FPG and IleRS RecR PF02132.15 gi|150399491|ref|YP_001323258.1| - 3.7 7.2 11.2 2.3 7.9 2.2 3.4 3 1 0 3 3 3 0 RecR protein zf-ACC PF17848.1 gi|150399491|ref|YP_001323258.1| - 5.8 7.1 18.1 2.8 8.1 0.6 3.9 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain A2L_zn_ribbon PF08792.10 gi|150399491|ref|YP_001323258.1| - 6 6.7 18.3 5.3 6.9 0.4 4.1 4 0 0 4 4 4 0 A2L zinc ribbon domain Terminase_GpA PF05876.12 gi|150399491|ref|YP_001323258.1| - 6.9 5.1 9.2 1.6 7.2 6.3 1.4 1 1 0 1 1 1 0 Phage terminase large subunit (GpA) TrkH PF02386.16 gi|150399492|ref|YP_001323259.1| - 3.1e-51 174.4 28.2 8.1e-31 107.0 12.3 2.1 1 1 1 2 2 2 2 Cation transport protein ATP-cone PF03477.16 gi|150399493|ref|YP_001323260.1| - 7.1e-09 36.1 1.7 1.9e-08 34.7 0.1 2.5 3 0 0 3 3 3 1 ATP cone domain AAA_18 PF13238.6 gi|150399493|ref|YP_001323260.1| - 9.6e-08 32.6 0.0 1.9e-07 31.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|150399493|ref|YP_001323260.1| - 0.00083 19.5 0.0 0.01 16.0 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|150399493|ref|YP_001323260.1| - 0.0042 17.5 0.4 0.18 12.3 0.0 3.1 2 1 1 3 3 3 1 AAA domain Pneumovirus_M2 PF06436.11 gi|150399493|ref|YP_001323260.1| - 0.011 15.2 0.5 0.088 12.3 0.4 2.2 2 0 0 2 2 2 0 Pneumovirus matrix protein 2 (M2) Cytidylate_kin2 PF13189.6 gi|150399493|ref|YP_001323260.1| - 0.027 14.6 0.5 0.078 13.1 0.0 2.0 2 1 0 2 2 2 0 Cytidylate kinase-like family AAA_28 PF13521.6 gi|150399493|ref|YP_001323260.1| - 0.028 14.7 0.1 0.072 13.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|150399493|ref|YP_001323260.1| - 0.052 13.3 0.2 0.15 11.8 0.0 1.8 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family RsgA_GTPase PF03193.16 gi|150399493|ref|YP_001323260.1| - 0.084 12.8 0.2 0.2 11.5 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase Zeta_toxin PF06414.12 gi|150399493|ref|YP_001323260.1| - 0.17 11.1 0.8 3 7.1 0.0 2.9 2 2 1 3 3 3 0 Zeta toxin Adenylsucc_synt PF00709.21 gi|150399494|ref|YP_001323261.1| - 4.2e-85 286.2 4.6 5.9e-43 147.4 0.0 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase CytochromB561_N PF09786.9 gi|150399494|ref|YP_001323261.1| - 0.21 10.5 0.0 0.25 10.3 0.0 1.1 1 0 0 1 1 1 0 Cytochrome B561, N terminal Ribosomal_L11_N PF03946.14 gi|150399495|ref|YP_001323262.1| - 1.9e-23 82.1 1.5 4e-23 81.0 1.5 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|150399495|ref|YP_001323262.1| - 2e-22 79.5 2.5 2e-22 79.5 2.5 1.9 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain Spt5-NGN PF03439.13 gi|150399496|ref|YP_001323263.1| - 1.4e-22 79.3 0.1 2.3e-22 78.7 0.1 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|150399496|ref|YP_001323263.1| - 2.7e-07 30.3 0.6 6.7e-07 29.0 0.6 1.6 1 0 0 1 1 1 1 KOW motif NusG PF02357.19 gi|150399496|ref|YP_001323263.1| - 0.00031 21.2 0.3 0.009 16.5 0.1 2.6 1 1 1 2 2 2 1 Transcription termination factor nusG SecE PF00584.20 gi|150399497|ref|YP_001323264.1| - 6.5e-08 32.4 0.0 7.5e-08 32.2 0.0 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Med25 PF11232.8 gi|150399497|ref|YP_001323264.1| - 0.081 12.9 0.0 0.096 12.7 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 Tubulin PF00091.25 gi|150399498|ref|YP_001323265.1| - 7.5e-44 150.3 2.5 1.5e-43 149.3 2.5 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|150399498|ref|YP_001323265.1| - 7.6e-33 112.7 0.8 7.6e-33 112.7 0.8 2.7 3 1 0 3 3 3 1 FtsZ family, C-terminal domain AlaDh_PNT_C PF01262.21 gi|150399498|ref|YP_001323265.1| - 0.00014 21.3 0.4 0.00024 20.5 0.4 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ZT_dimer PF16916.5 gi|150399498|ref|YP_001323265.1| - 0.035 14.2 0.3 0.16 12.1 0.0 2.2 2 0 0 2 2 2 0 Dimerisation domain of Zinc Transporter Polysacc_deac_2 PF04748.13 gi|150399498|ref|YP_001323265.1| - 0.046 12.9 0.0 0.13 11.4 0.0 1.7 2 0 0 2 2 2 0 Divergent polysaccharide deacetylase Tubulin_2 PF13809.6 gi|150399498|ref|YP_001323265.1| - 0.09 11.9 4.3 0.15 11.2 0.7 2.5 1 1 0 2 2 2 0 Tubulin like TP6A_N PF04406.14 gi|150399499|ref|YP_001323266.1| - 8.9e-14 51.2 0.0 1.8e-13 50.3 0.0 1.5 1 0 0 1 1 1 1 Type IIB DNA topoisomerase Acetyltransf_8 PF13523.6 gi|150399499|ref|YP_001323266.1| - 0.0087 15.7 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain CAP PF00188.26 gi|150399500|ref|YP_001323267.1| - 3.7e-21 76.3 0.8 1.1e-20 74.7 0.0 2.0 2 0 0 2 2 2 1 Cysteine-rich secretory protein family VCX_VCY PF15231.6 gi|150399500|ref|YP_001323267.1| - 0.012 16.3 4.7 0.021 15.5 4.7 1.4 1 0 0 1 1 1 0 Variable charge X/Y family TcdB_N PF12918.7 gi|150399500|ref|YP_001323267.1| - 0.053 13.8 0.5 0.15 12.4 0.0 2.0 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain PhosphMutase PF10143.9 gi|150399501|ref|YP_001323268.1| - 1.8e-53 180.9 0.0 3.8e-53 179.8 0.0 1.5 2 0 0 2 2 2 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|150399501|ref|YP_001323268.1| - 7.4e-46 156.5 0.1 8.8e-46 156.3 0.1 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|150399501|ref|YP_001323268.1| - 9.4e-05 22.2 0.4 0.00062 19.5 0.0 2.2 3 0 0 3 3 3 1 Type I phosphodiesterase / nucleotide pyrophosphatase Tubulin PF00091.25 gi|150399501|ref|YP_001323268.1| - 0.11 12.6 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain Wyosine_form PF08608.12 gi|150399502|ref|YP_001323269.1| - 5.7e-18 65.0 0.0 1.2e-17 64.0 0.0 1.6 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 gi|150399502|ref|YP_001323269.1| - 4.4e-17 62.9 0.0 1.1e-16 61.7 0.0 1.6 1 1 0 1 1 1 1 Radical SAM superfamily PSI_integrin PF17205.3 gi|150399502|ref|YP_001323269.1| - 0.086 12.6 4.5 0.24 11.2 4.5 1.8 1 0 0 1 1 1 0 Integrin plexin domain MobB PF03205.14 gi|150399503|ref|YP_001323270.1| - 5.1e-20 71.7 1.3 8.7e-20 71.0 0.4 1.7 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B FeS PF04060.13 gi|150399503|ref|YP_001323270.1| - 0.00045 19.8 0.4 0.00086 18.9 0.4 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster AAA_7 PF12775.7 gi|150399503|ref|YP_001323270.1| - 0.044 13.3 0.2 0.075 12.5 0.2 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region HTH_5 PF01022.20 gi|150399504|ref|YP_001323271.1| - 2.6e-20 72.0 0.5 3.7e-20 71.5 0.5 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|150399504|ref|YP_001323271.1| - 5.1e-14 52.1 0.0 6.2e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|150399504|ref|YP_001323271.1| - 4.8e-07 29.2 0.1 6.9e-07 28.7 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|150399504|ref|YP_001323271.1| - 0.00021 21.1 0.0 0.00032 20.5 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|150399504|ref|YP_001323271.1| - 0.00035 20.7 0.0 0.00047 20.3 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain Penicillinase_R PF03965.16 gi|150399504|ref|YP_001323271.1| - 0.0046 17.3 0.0 0.0071 16.7 0.0 1.3 1 1 0 1 1 1 1 Penicillinase repressor DUF4423 PF14394.6 gi|150399504|ref|YP_001323271.1| - 0.013 15.2 0.0 0.018 14.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) MarR PF01047.22 gi|150399504|ref|YP_001323271.1| - 0.016 15.1 0.1 0.022 14.7 0.1 1.1 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.20 gi|150399504|ref|YP_001323271.1| - 0.019 15.3 0.0 0.028 14.8 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator TFIIE_alpha PF02002.17 gi|150399504|ref|YP_001323271.1| - 0.04 13.8 0.0 0.055 13.3 0.0 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit RepL PF05732.11 gi|150399504|ref|YP_001323271.1| - 0.082 12.3 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_DeoR PF08220.12 gi|150399504|ref|YP_001323271.1| - 0.091 12.5 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain DUF2250 PF10007.9 gi|150399504|ref|YP_001323271.1| - 0.11 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) MarR_2 PF12802.7 gi|150399504|ref|YP_001323271.1| - 0.17 11.8 0.0 0.23 11.4 0.0 1.1 1 0 0 1 1 1 0 MarR family MMR_HSR1_Xtn PF16897.5 gi|150399505|ref|YP_001323272.1| - 1.1e-32 112.2 0.1 2.1e-32 111.3 0.1 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain TGS PF02824.21 gi|150399505|ref|YP_001323272.1| - 7.4e-22 77.2 0.1 1.3e-21 76.4 0.1 1.4 1 0 0 1 1 1 1 TGS domain MMR_HSR1 PF01926.23 gi|150399505|ref|YP_001323272.1| - 1.8e-21 76.3 0.0 4e-21 75.2 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|150399505|ref|YP_001323272.1| - 2.5e-13 49.8 0.3 1.9e-12 47.0 0.0 2.1 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|150399505|ref|YP_001323272.1| - 3.3e-06 27.1 0.4 0.047 13.6 0.0 3.1 3 0 0 3 3 3 2 RsgA GTPase GTP_EFTU PF00009.27 gi|150399505|ref|YP_001323272.1| - 0.0013 18.3 1.1 2.5 7.6 0.1 3.6 2 2 0 2 2 2 1 Elongation factor Tu GTP binding domain cobW PF02492.19 gi|150399505|ref|YP_001323272.1| - 0.017 14.7 1.1 2.9 7.5 0.0 2.8 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 gi|150399505|ref|YP_001323272.1| - 0.034 14.2 0.2 0.62 10.1 0.1 2.5 1 1 1 2 2 2 0 Dynamin family MeaB PF03308.16 gi|150399505|ref|YP_001323272.1| - 0.042 12.8 0.1 0.088 11.8 0.1 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 gi|150399505|ref|YP_001323272.1| - 0.098 12.4 0.1 6.2 6.5 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein NB-ARC PF00931.22 gi|150399505|ref|YP_001323272.1| - 0.1 11.8 0.1 0.2 10.8 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain AIG1 PF04548.16 gi|150399505|ref|YP_001323272.1| - 0.13 11.6 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 AIG1 family RRG8 PF17068.5 gi|150399505|ref|YP_001323272.1| - 0.21 11.0 0.6 0.39 10.1 0.6 1.4 1 0 0 1 1 1 0 Required for respiratory growth protein 8 mitochondrial Peptidase_M24 PF00557.24 gi|150399506|ref|YP_001323273.1| - 7.2e-37 127.1 0.0 8.6e-37 126.9 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 GATase PF00117.28 gi|150399507|ref|YP_001323274.1| - 3.8e-41 141.0 0.5 4.3e-41 140.8 0.5 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|150399507|ref|YP_001323274.1| - 4.1e-16 59.4 0.5 2.9e-14 53.3 0.1 2.3 1 1 1 2 2 2 2 Peptidase C26 SNO PF01174.19 gi|150399507|ref|YP_001323274.1| - 0.02 14.7 0.5 0.2 11.5 0.5 2.2 1 1 0 1 1 1 0 SNO glutamine amidotransferase family zf-ZPR1 PF03367.13 gi|150399508|ref|YP_001323275.1| - 2.6e-36 124.9 0.0 3.1e-36 124.6 0.0 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Lar_restr_allev PF14354.6 gi|150399508|ref|YP_001323275.1| - 0.0066 16.8 0.2 0.012 15.9 0.2 1.5 1 0 0 1 1 1 1 Restriction alleviation protein Lar HTH_3 PF01381.22 gi|150399509|ref|YP_001323276.1| - 1e-09 38.3 0.1 2.3e-09 37.2 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|150399509|ref|YP_001323276.1| - 1.5e-08 34.5 0.4 9.3e-07 28.8 0.0 2.5 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|150399509|ref|YP_001323276.1| - 3e-05 24.3 0.0 6.2e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|150399509|ref|YP_001323276.1| - 0.00021 21.2 0.1 0.00053 19.9 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|150399509|ref|YP_001323276.1| - 0.0033 17.3 0.0 0.0085 15.9 0.0 1.7 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HNF-1_N PF04814.13 gi|150399509|ref|YP_001323276.1| - 0.0048 17.5 0.1 0.013 16.2 0.0 1.7 2 0 0 2 2 2 1 Hepatocyte nuclear factor 1 (HNF-1), N terminus HTH_25 PF13413.6 gi|150399509|ref|YP_001323276.1| - 0.038 13.9 0.0 0.13 12.2 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|150399509|ref|YP_001323276.1| - 0.045 13.9 0.0 0.11 12.6 0.0 1.6 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA NiFe_hyd_3_EhaA PF17367.2 gi|150399510|ref|YP_001323277.1| - 6.7e-13 48.6 5.9 7.4e-13 48.5 5.9 1.0 1 0 0 1 1 1 1 NiFe-hydrogenase-type-3 Eha complex subunit A Cytochrom_B_N_2 PF13631.6 gi|150399510|ref|YP_001323277.1| - 0.058 13.4 1.5 0.15 12.1 0.3 1.9 1 1 1 2 2 2 0 Cytochrome b(N-terminal)/b6/petB DUF4149 PF13664.6 gi|150399511|ref|YP_001323278.1| - 1.5 9.2 5.8 0.56 10.6 0.3 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4149) Fun_ATP-synt_8 PF05933.13 gi|150399511|ref|YP_001323278.1| - 3.1 8.0 7.6 0.28 11.4 1.2 2.6 2 1 0 2 2 2 0 Fungal ATP synthase protein 8 (A6L) PgpA PF04608.13 gi|150399511|ref|YP_001323278.1| - 6.9 6.7 9.0 3.6 7.6 0.8 2.9 2 1 1 3 3 3 0 Phosphatidylglycerophosphatase A DUF2109 PF09882.9 gi|150399512|ref|YP_001323279.1| - 5.7e-29 99.9 6.9 6.7e-29 99.7 6.9 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2109) CPP1-like PF11833.8 gi|150399512|ref|YP_001323279.1| - 0.031 13.9 1.0 0.037 13.7 1.0 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF4179 PF13786.6 gi|150399512|ref|YP_001323279.1| - 2.1 8.9 5.0 3.3 8.2 5.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5408 PF17402.2 gi|150399512|ref|YP_001323279.1| - 3.3 7.6 7.7 0.48 10.3 3.6 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5408) DUF2108 PF09881.9 gi|150399513|ref|YP_001323280.1| - 2.1e-27 94.9 7.1 2.4e-27 94.7 7.1 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2108) TssN PF17555.2 gi|150399513|ref|YP_001323280.1| - 0.11 11.8 2.7 0.13 11.6 2.7 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF2107 PF09880.9 gi|150399514|ref|YP_001323281.1| - 3.6e-34 116.7 5.8 4.3e-34 116.5 5.8 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2107) DUF2106 PF09879.9 gi|150399515|ref|YP_001323282.1| - 9.4e-68 226.5 0.4 1.1e-67 226.3 0.4 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2106) DUF2105 PF09878.9 gi|150399516|ref|YP_001323283.1| - 6.3e-82 274.2 11.9 7.2e-82 274.0 11.9 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2105) MnhB PF04039.13 gi|150399516|ref|YP_001323283.1| - 0.021 15.1 6.2 0.021 15.1 6.2 2.4 2 0 0 2 2 2 0 Domain related to MnhB subunit of Na+/H+ antiporter DUF4731 PF15875.5 gi|150399516|ref|YP_001323283.1| - 0.14 12.4 0.6 0.35 11.1 0.6 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) NADHdeh_related PF10125.9 gi|150399517|ref|YP_001323284.1| - 1.9e-100 334.8 14.4 2.1e-100 334.6 14.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase I, subunit N related protein Proton_antipo_M PF00361.20 gi|150399517|ref|YP_001323284.1| - 4.1e-06 26.2 6.8 4.1e-06 26.2 6.8 1.5 2 0 0 2 2 2 1 Proton-conducting membrane transporter NADHdh PF00146.21 gi|150399519|ref|YP_001323286.1| - 1.9e-25 89.8 23.7 4.2e-25 88.7 23.7 1.5 1 1 0 1 1 1 1 NADH dehydrogenase DUF3981 PF13139.6 gi|150399520|ref|YP_001323287.1| - 0.25 11.7 4.8 0.29 11.5 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3981) PRA1 PF03208.19 gi|150399520|ref|YP_001323287.1| - 0.45 10.1 5.9 0.53 9.9 5.9 1.1 1 0 0 1 1 1 0 PRA1 family protein TssN PF17555.2 gi|150399520|ref|YP_001323287.1| - 0.88 8.9 11.6 0.97 8.8 11.6 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DDDD PF10161.9 gi|150399520|ref|YP_001323287.1| - 4.7 7.1 5.3 0.88 9.4 0.9 2.0 1 1 2 3 3 3 0 Putative mitochondrial precursor protein DUF2104 PF09877.9 gi|150399521|ref|YP_001323288.1| - 3.6e-28 97.8 2.9 4.4e-28 97.5 2.9 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2104) YrhK PF14145.6 gi|150399521|ref|YP_001323288.1| - 0.038 13.8 5.2 0.047 13.6 0.8 2.2 1 1 1 2 2 2 0 YrhK-like protein DUF1959 PF09218.10 gi|150399522|ref|YP_001323289.1| - 5.4e-49 165.1 0.3 6.4e-49 164.9 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1959) Oxidored_q6 PF01058.22 gi|150399523|ref|YP_001323290.1| - 4.7e-27 94.4 0.1 6.2e-27 94.0 0.1 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_49kDa PF00346.19 gi|150399524|ref|YP_001323291.1| - 4.5e-44 150.6 0.3 1.8e-35 122.4 0.1 2.2 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|150399524|ref|YP_001323291.1| - 2.8e-12 46.3 1.8 2.8e-12 46.3 1.8 2.6 4 0 0 4 4 4 1 Nickel-dependent hydrogenase Fer4 PF00037.27 gi|150399525|ref|YP_001323292.1| - 2.5e-42 141.1 86.1 4e-07 29.6 3.0 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399525|ref|YP_001323292.1| - 6e-37 126.0 120.3 2.9e-10 40.6 9.8 5.9 2 2 5 7 7 7 7 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399525|ref|YP_001323292.1| - 3.6e-32 110.3 133.6 3.7e-09 36.6 8.2 5.9 1 1 7 8 8 8 8 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399525|ref|YP_001323292.1| - 4.4e-31 105.6 85.8 6e-05 22.9 2.7 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399525|ref|YP_001323292.1| - 2e-30 104.7 69.8 1e-07 31.9 12.3 7.4 3 2 5 8 8 8 8 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399525|ref|YP_001323292.1| - 3.3e-30 104.8 58.9 1e-05 26.3 9.0 7.8 6 2 1 7 7 7 6 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|150399525|ref|YP_001323292.1| - 3.9e-27 92.6 81.0 0.00087 19.2 3.1 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399525|ref|YP_001323292.1| - 3.1e-26 91.3 77.2 1.5e-08 34.6 12.0 5.3 3 2 2 5 5 5 5 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399525|ref|YP_001323292.1| - 4.4e-18 64.2 76.7 0.003 17.9 2.1 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399525|ref|YP_001323292.1| - 8.3e-18 64.6 65.2 7.1e-07 29.6 2.5 6.8 3 3 3 6 6 6 5 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399525|ref|YP_001323292.1| - 2.1e-15 57.0 65.7 1.1e-05 25.9 5.0 7.1 3 3 5 8 8 8 6 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399525|ref|YP_001323292.1| - 2.3e-11 43.8 90.6 0.057 14.4 3.9 8.2 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_18 PF13746.6 gi|150399525|ref|YP_001323292.1| - 1.2e-08 35.1 73.7 4.5e-05 23.6 12.5 6.4 2 2 3 5 5 5 4 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|150399525|ref|YP_001323292.1| - 1.6e-05 25.3 75.1 0.22 12.1 1.6 8.4 8 0 0 8 8 8 5 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|150399525|ref|YP_001323292.1| - 0.00061 20.6 71.9 0.41 11.5 1.1 8.4 4 3 4 9 9 8 5 4Fe-4S dicluster domain YABBY PF04690.13 gi|150399525|ref|YP_001323292.1| - 0.01 16.4 0.9 0.01 16.4 0.9 3.4 2 1 1 3 3 3 0 YABBY protein Fer4 PF00037.27 gi|150399526|ref|YP_001323293.1| - 2e-23 81.2 39.9 8.9e-07 28.5 4.5 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399526|ref|YP_001323293.1| - 1.3e-19 69.3 38.4 1.1e-06 28.4 4.2 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399526|ref|YP_001323293.1| - 2.8e-19 69.4 25.3 7.3e-09 36.1 12.5 3.2 3 0 0 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399526|ref|YP_001323293.1| - 1.3e-15 57.2 33.2 9.9e-08 32.0 13.9 3.3 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399526|ref|YP_001323293.1| - 2e-14 54.3 31.9 8.3e-06 26.7 13.1 4.0 3 1 1 4 4 4 4 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|150399526|ref|YP_001323293.1| - 2e-14 53.4 30.8 1.4e-07 31.6 10.2 3.1 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399526|ref|YP_001323293.1| - 2.3e-11 43.1 35.0 0.00013 21.8 3.1 4.7 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399526|ref|YP_001323293.1| - 1.4e-10 41.2 38.1 3.9e-06 26.9 14.9 3.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399526|ref|YP_001323293.1| - 8.7e-09 35.2 36.9 0.0013 19.1 2.2 4.4 5 0 0 5 5 4 3 4Fe-4S binding domain Fer4_3 PF12798.7 gi|150399526|ref|YP_001323293.1| - 6.5e-07 29.9 42.1 0.02 15.8 3.6 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399526|ref|YP_001323293.1| - 6.4e-06 26.5 34.3 0.2 12.1 2.2 4.0 1 1 4 5 5 5 5 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399526|ref|YP_001323293.1| - 7.7e-06 26.4 32.6 0.037 14.6 2.0 3.9 1 1 4 5 5 5 5 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399526|ref|YP_001323293.1| - 0.00088 19.5 33.6 0.064 13.5 13.5 3.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|150399526|ref|YP_001323293.1| - 0.0024 18.4 32.2 0.24 12.0 3.8 4.4 4 0 0 4 4 4 3 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|150399526|ref|YP_001323293.1| - 0.031 15.1 30.5 1.6 9.6 1.2 4.1 2 1 0 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150399526|ref|YP_001323293.1| - 0.04 14.6 5.5 0.28 12.0 0.5 4.9 4 2 0 4 4 4 0 4Fe-4S single cluster domain Fer4 PF00037.27 gi|150399527|ref|YP_001323294.1| - 2.3e-36 122.2 61.3 1.4e-07 31.0 6.7 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399527|ref|YP_001323294.1| - 2.6e-31 108.0 119.5 3.3e-09 37.2 12.4 4.4 1 1 6 7 7 7 7 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399527|ref|YP_001323294.1| - 3.1e-25 87.1 57.8 6.6e-05 22.8 4.5 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399527|ref|YP_001323294.1| - 1.1e-24 86.3 84.2 1e-08 35.2 10.3 4.2 2 1 3 5 5 5 5 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399527|ref|YP_001323294.1| - 1.6e-24 86.6 47.6 7.9e-05 23.5 1.6 6.2 6 0 0 6 6 6 6 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|150399527|ref|YP_001323294.1| - 6e-23 80.7 57.9 1.5e-08 34.6 12.1 4.2 3 1 0 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399527|ref|YP_001323294.1| - 6.4e-21 74.2 56.8 1.2e-06 28.6 14.1 5.0 2 2 4 6 6 6 6 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399527|ref|YP_001323294.1| - 1.2e-16 59.7 53.8 0.004 17.2 4.5 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399527|ref|YP_001323294.1| - 7.1e-15 55.2 48.6 0.00062 20.2 11.0 5.6 4 1 2 6 6 6 6 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399527|ref|YP_001323294.1| - 1.5e-12 47.8 45.6 8.4e-06 26.2 7.7 5.3 3 2 3 6 6 6 5 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399527|ref|YP_001323294.1| - 5e-10 39.1 55.6 0.012 16.0 3.5 6.3 6 0 0 6 6 6 5 4Fe-4S binding domain Fer4_3 PF12798.7 gi|150399527|ref|YP_001323294.1| - 7.7e-08 32.8 64.4 0.032 15.2 5.3 6.3 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_13 PF13370.6 gi|150399527|ref|YP_001323294.1| - 5.5e-07 30.0 54.4 0.067 13.7 4.1 6.8 5 1 1 6 6 6 5 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|150399527|ref|YP_001323294.1| - 0.0056 16.9 50.3 0.55 10.4 11.1 5.0 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150399527|ref|YP_001323294.1| - 0.0056 17.5 47.9 1.8 9.4 2.2 6.1 2 1 6 8 8 8 4 4Fe-4S dicluster domain DUF3079 PF11278.8 gi|150399527|ref|YP_001323294.1| - 0.018 14.9 14.1 2.7 7.9 0.2 5.2 4 1 1 5 5 5 0 Protein of unknown function (DUF3079) DUF1335 PF07056.11 gi|150399527|ref|YP_001323294.1| - 0.036 14.2 0.8 8.5 6.5 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1335) CBS PF00571.28 gi|150399528|ref|YP_001323295.1| - 4.4e-14 52.7 1.7 6.3e-06 26.6 0.6 2.3 2 0 0 2 2 2 2 CBS domain sCache_3_2 PF17203.4 gi|150399528|ref|YP_001323295.1| - 0.15 12.2 0.0 3.1 7.9 0.0 2.1 2 0 0 2 2 2 0 Single cache domain 3 HTH_11 PF08279.12 gi|150399529|ref|YP_001323296.1| - 9.6e-10 38.3 0.0 1.8e-09 37.4 0.0 1.5 1 0 0 1 1 1 1 HTH domain HrcA_DNA-bdg PF03444.15 gi|150399529|ref|YP_001323296.1| - 2.1e-05 24.1 0.0 4e-05 23.2 0.0 1.5 1 1 1 2 2 2 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Rrf2 PF02082.20 gi|150399529|ref|YP_001323296.1| - 0.11 12.8 0.0 0.21 11.9 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator SLD3 PF08639.10 gi|150399529|ref|YP_001323296.1| - 0.21 10.3 1.1 0.25 10.1 1.1 1.0 1 0 0 1 1 1 0 DNA replication regulator SLD3 MNHE PF01899.16 gi|150399530|ref|YP_001323297.1| - 2.9e-17 62.8 0.0 3.1e-17 62.7 0.0 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit Prefoldin PF02996.17 gi|150399531|ref|YP_001323298.1| - 7.7e-20 71.0 4.8 1e-19 70.6 4.8 1.2 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|150399531|ref|YP_001323298.1| - 2.1e-06 27.7 11.4 0.0028 17.6 3.7 2.3 1 1 1 2 2 2 2 Prefoldin subunit COG2 PF06148.11 gi|150399531|ref|YP_001323298.1| - 0.024 14.7 5.6 0.046 13.8 0.8 2.1 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 OSK PF17182.4 gi|150399531|ref|YP_001323298.1| - 0.027 13.7 0.5 0.049 12.9 0.3 1.5 1 1 0 1 1 1 0 OSK domain DNA_repr_REX1B PF14966.6 gi|150399531|ref|YP_001323298.1| - 0.038 14.7 3.5 0.59 10.8 0.4 2.2 2 0 0 2 2 2 0 DNA repair REX1-B DUF948 PF06103.11 gi|150399531|ref|YP_001323298.1| - 0.058 13.7 5.0 0.11 12.8 1.7 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Syntaxin-6_N PF09177.11 gi|150399531|ref|YP_001323298.1| - 0.064 13.8 3.7 7.3 7.2 1.3 2.2 2 0 0 2 2 2 0 Syntaxin 6, N-terminal Baculo_PEP_C PF04513.12 gi|150399531|ref|YP_001323298.1| - 0.064 13.3 4.6 1 9.4 0.3 2.2 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 gi|150399531|ref|YP_001323298.1| - 0.086 12.9 8.3 0.95 9.5 1.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) IFT57 PF10498.9 gi|150399531|ref|YP_001323298.1| - 0.099 11.6 6.5 0.045 12.7 0.7 2.0 2 0 0 2 2 2 0 Intra-flagellar transport protein 57 DUF641 PF04859.12 gi|150399531|ref|YP_001323298.1| - 0.15 12.4 8.3 1.4 9.2 1.1 2.1 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) COQ7 PF03232.13 gi|150399531|ref|YP_001323298.1| - 0.15 11.8 2.1 0.49 10.1 0.3 2.0 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 FlxA PF14282.6 gi|150399531|ref|YP_001323298.1| - 0.16 12.0 8.8 0.16 11.9 2.2 2.2 2 0 0 2 2 2 0 FlxA-like protein DUF1759 PF03564.15 gi|150399531|ref|YP_001323298.1| - 0.19 11.7 3.2 3.2 7.7 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) LPP PF04728.13 gi|150399531|ref|YP_001323298.1| - 0.24 11.8 1.9 18 5.8 0.0 2.6 2 1 0 2 2 2 0 Lipoprotein leucine-zipper Med4 PF10018.9 gi|150399531|ref|YP_001323298.1| - 0.56 9.8 7.6 0.88 9.2 1.0 2.1 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 ATG16 PF08614.11 gi|150399531|ref|YP_001323298.1| - 0.9 9.7 8.1 0.73 10.0 2.0 2.0 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) TMPIT PF07851.13 gi|150399531|ref|YP_001323298.1| - 0.97 8.6 5.7 1.2 8.3 2.2 2.0 2 0 0 2 2 2 0 TMPIT-like protein NPV_P10 PF05531.12 gi|150399531|ref|YP_001323298.1| - 0.99 9.9 6.7 3 8.4 0.3 2.5 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DHR10 PF18595.1 gi|150399531|ref|YP_001323298.1| - 1.2 9.2 12.9 1.5 8.9 5.0 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF3450 PF11932.8 gi|150399531|ref|YP_001323298.1| - 1.3 8.3 8.7 3.9 6.7 1.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) APG17 PF04108.12 gi|150399531|ref|YP_001323298.1| - 1.3 8.0 7.7 0.44 9.6 1.4 2.0 1 1 0 2 2 2 0 Autophagy protein Apg17 DUF16 PF01519.16 gi|150399531|ref|YP_001323298.1| - 1.4 9.5 7.9 7.6 7.1 2.3 2.2 2 0 0 2 2 2 0 Protein of unknown function DUF16 CLZ PF16526.5 gi|150399531|ref|YP_001323298.1| - 2 8.8 10.6 0.68 10.3 3.0 2.3 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Fib_alpha PF08702.10 gi|150399531|ref|YP_001323298.1| - 3 8.0 7.0 2.5 8.3 0.8 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family UPF0242 PF06785.11 gi|150399531|ref|YP_001323298.1| - 3.1 7.9 10.8 28 4.8 10.8 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TolA_bind_tri PF16331.5 gi|150399531|ref|YP_001323298.1| - 4.1 7.6 10.2 0.91 9.6 0.3 2.7 2 2 0 2 2 2 0 TolA binding protein trimerisation CdvA PF18822.1 gi|150399531|ref|YP_001323298.1| - 7 6.5 14.2 8.9 6.2 4.8 2.2 2 0 0 2 2 2 0 CdvA-like coiled-coil domain AAA_23 PF13476.6 gi|150399531|ref|YP_001323298.1| - 7.4 7.0 10.3 19 5.7 10.3 1.7 1 1 0 1 1 1 0 AAA domain HIP1_clath_bdg PF16515.5 gi|150399531|ref|YP_001323298.1| - 8.7 7.0 11.9 13 6.4 2.9 2.4 2 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 BRE1 PF08647.11 gi|150399531|ref|YP_001323298.1| - 9.8 6.3 13.8 2.9 8.0 1.6 2.3 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase HIGH_NTase1_ass PF16581.5 gi|150399532|ref|YP_001323299.1| - 1.3e-73 247.4 10.9 1.3e-73 247.4 10.9 1.9 2 0 0 2 2 2 1 Cytidyltransferase-related C-terminal region HIGH_NTase1 PF05636.11 gi|150399532|ref|YP_001323299.1| - 2.5e-19 69.8 0.6 1.1e-13 51.2 0.0 2.3 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase Citrate_ly_lig PF08218.11 gi|150399532|ref|YP_001323299.1| - 0.0094 15.7 0.9 0.088 12.5 0.0 2.8 3 2 0 3 3 3 1 Citrate lyase ligase C-terminal domain CTP_transf_like PF01467.26 gi|150399532|ref|YP_001323299.1| - 0.047 13.9 0.0 0.73 10.0 0.0 2.6 1 1 0 1 1 1 0 Cytidylyltransferase-like PIN_5 PF08745.11 gi|150399533|ref|YP_001323300.1| - 1.6e-89 298.8 0.2 1.8e-89 298.6 0.2 1.0 1 0 0 1 1 1 1 PINc domain ribonuclease SRI PF08236.11 gi|150399533|ref|YP_001323300.1| - 0.016 15.3 0.1 1.2 9.4 0.0 2.4 2 0 0 2 2 2 0 SRI (Set2 Rpb1 interacting) domain Collectrin PF16959.5 gi|150399533|ref|YP_001323300.1| - 0.018 14.8 0.1 0.024 14.4 0.1 1.5 1 0 0 1 1 1 0 Renal amino acid transporter HTH_Tnp_Tc5 PF03221.16 gi|150399533|ref|YP_001323300.1| - 0.14 12.2 0.0 0.3 11.1 0.0 1.6 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain DUF356 PF04009.12 gi|150399534|ref|YP_001323301.1| - 2e-40 137.3 1.6 2.4e-40 137.1 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF356) tRNA-synt_1 PF00133.22 gi|150399535|ref|YP_001323302.1| - 2.1e-174 581.2 5.3 2.1e-174 581.2 5.3 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|150399535|ref|YP_001323302.1| - 5.4e-25 88.1 2.7 1.2e-24 87.0 2.7 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|150399535|ref|YP_001323302.1| - 1.4e-24 86.6 2.1 4.9e-09 35.4 0.1 4.0 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|150399535|ref|YP_001323302.1| - 4.9e-09 35.9 0.1 3.8e-07 29.8 0.0 2.6 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|150399535|ref|YP_001323302.1| - 1.4e-06 27.5 1.0 0.00014 20.9 0.0 3.1 3 0 0 3 3 3 1 tRNA synthetases class I (K) tRNA-synt_1_2 PF13603.6 gi|150399535|ref|YP_001323302.1| - 0.0027 17.2 0.0 0.0087 15.6 0.0 1.8 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 SpoIIM PF01944.17 gi|150399537|ref|YP_001323304.1| - 0.0063 16.6 17.8 0.017 15.2 17.4 1.9 1 1 0 1 1 1 1 Stage II sporulation protein M Erf4 PF10256.9 gi|150399537|ref|YP_001323304.1| - 0.04 14.0 0.3 0.066 13.3 0.3 1.4 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family IlvGEDA_leader PF08046.11 gi|150399537|ref|YP_001323304.1| - 1.2 8.7 6.6 1.5 8.3 0.8 2.4 2 0 0 2 2 2 0 IlvGEDA operon leader peptide GATase_3 PF07685.14 gi|150399538|ref|YP_001323305.1| - 6.2e-34 117.3 0.3 8.9e-34 116.8 0.3 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|150399538|ref|YP_001323305.1| - 4.2e-18 65.6 0.1 7.4e-18 64.8 0.1 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|150399538|ref|YP_001323305.1| - 1.4e-15 57.6 0.8 2.6e-12 47.0 0.8 2.4 1 1 0 1 1 1 1 AAA domain SNO PF01174.19 gi|150399538|ref|YP_001323305.1| - 0.002 18.0 0.0 0.0049 16.7 0.0 1.7 1 0 0 1 1 1 1 SNO glutamine amidotransferase family DisA_N PF02457.16 gi|150399539|ref|YP_001323306.1| - 1.4e-22 79.5 0.2 2.9e-22 78.5 0.2 1.6 1 0 0 1 1 1 1 DisA bacterial checkpoint controller nucleotide-binding PK_C PF02887.16 gi|150399539|ref|YP_001323306.1| - 7.4e-10 39.1 1.5 9.5e-09 35.5 0.1 2.7 2 1 0 2 2 2 1 Pyruvate kinase, alpha/beta domain Aconitase PF00330.20 gi|150399540|ref|YP_001323307.1| - 3.5e-91 306.5 8.2 6.3e-89 299.1 8.2 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) HisK_sensor PF18698.1 gi|150399540|ref|YP_001323307.1| - 0.061 13.7 0.1 0.24 11.8 0.0 1.9 2 0 0 2 2 2 0 Histidine kinase sensor domain CbiM PF01891.16 gi|150399541|ref|YP_001323308.1| - 1.3e-53 181.9 19.2 1.5e-53 181.7 19.2 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region ATP-synt_J PF04911.12 gi|150399541|ref|YP_001323308.1| - 0.09 12.4 0.1 0.21 11.2 0.1 1.6 1 0 0 1 1 1 0 ATP synthase j chain PMP22_Claudin PF00822.20 gi|150399541|ref|YP_001323308.1| - 0.8 9.6 7.5 0.93 9.3 3.4 2.4 2 1 0 2 2 2 0 PMP-22/EMP/MP20/Claudin family CbiN PF02553.15 gi|150399542|ref|YP_001323309.1| - 2.9e-30 104.0 0.2 3.9e-30 103.6 0.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN CbiQ PF02361.16 gi|150399543|ref|YP_001323310.1| - 4.4e-44 150.7 9.7 5.3e-44 150.4 9.7 1.1 1 0 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.27 gi|150399544|ref|YP_001323311.1| - 7.4e-32 110.7 0.0 1.4e-31 109.8 0.0 1.4 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|150399544|ref|YP_001323311.1| - 1.3e-14 54.7 0.8 5.4e-11 42.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|150399544|ref|YP_001323311.1| - 6.5e-08 32.3 0.0 3.2e-07 30.0 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|150399544|ref|YP_001323311.1| - 0.00027 20.8 0.2 0.18 11.5 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|150399544|ref|YP_001323311.1| - 0.0081 16.7 0.5 0.0089 16.5 0.5 1.6 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|150399544|ref|YP_001323311.1| - 0.0091 15.7 0.1 0.017 14.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|150399544|ref|YP_001323311.1| - 0.011 15.3 0.1 0.019 14.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|150399544|ref|YP_001323311.1| - 0.16 12.3 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|150399544|ref|YP_001323311.1| - 0.16 12.2 0.0 1.2 9.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain MoCF_biosynth PF00994.24 gi|150399545|ref|YP_001323312.1| - 3.3e-27 94.9 0.0 4e-27 94.7 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain MS_channel PF00924.18 gi|150399546|ref|YP_001323313.1| - 1.3e-46 158.7 0.7 1.9e-46 158.2 0.7 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel TM_helix PF05552.12 gi|150399546|ref|YP_001323313.1| - 0.14 12.2 0.2 0.14 12.2 0.2 2.2 2 0 0 2 2 2 0 Conserved TM helix YajC PF02699.15 gi|150399546|ref|YP_001323313.1| - 0.16 11.9 0.3 0.16 11.9 0.3 2.0 2 0 0 2 2 2 0 Preprotein translocase subunit Aldedh PF00171.22 gi|150399547|ref|YP_001323314.1| - 9.6e-147 489.2 0.1 1.2e-146 488.9 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family PmbA_TldD PF01523.16 gi|150399548|ref|YP_001323315.1| - 5.4e-61 206.9 0.8 6.9e-61 206.5 0.8 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase NAD_kinase PF01513.21 gi|150399549|ref|YP_001323316.1| - 3.4e-63 213.6 0.8 2e-62 211.1 0.8 2.0 1 1 0 1 1 1 1 ATP-NAD kinase Inositol_P PF00459.25 gi|150399549|ref|YP_001323316.1| - 4.2e-27 95.3 0.0 4.9e-26 91.8 0.0 2.1 1 1 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|150399549|ref|YP_001323316.1| - 0.0013 18.3 0.0 0.0024 17.4 0.0 1.4 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain DAGK_cat PF00781.24 gi|150399549|ref|YP_001323316.1| - 0.0066 16.1 0.0 0.02 14.5 0.0 1.8 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain DUF3942 PF13078.6 gi|150399549|ref|YP_001323316.1| - 0.059 13.7 3.1 5.6 7.3 0.2 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3942) KTI12 PF08433.10 gi|150399550|ref|YP_001323317.1| - 3.7e-49 167.6 9.9 9e-48 163.1 9.9 2.0 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_33 PF13671.6 gi|150399550|ref|YP_001323317.1| - 1.6e-14 54.3 0.0 2.5e-14 53.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|150399550|ref|YP_001323317.1| - 3.9e-09 37.2 1.7 2.8e-08 34.4 0.0 2.5 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|150399550|ref|YP_001323317.1| - 1.3e-06 27.9 0.0 4.3e-06 26.2 0.0 1.8 1 1 0 1 1 1 1 Zeta toxin APS_kinase PF01583.20 gi|150399550|ref|YP_001323317.1| - 3.2e-05 23.9 0.0 8.4e-05 22.5 0.0 1.5 1 1 0 1 1 1 1 Adenylylsulphate kinase CPT PF07931.12 gi|150399550|ref|YP_001323317.1| - 0.00011 22.1 0.0 0.019 14.8 0.0 2.2 1 1 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein SKI PF01202.22 gi|150399550|ref|YP_001323317.1| - 0.0016 18.6 0.0 0.0035 17.5 0.0 1.7 1 0 0 1 1 1 1 Shikimate kinase AAA_14 PF13173.6 gi|150399550|ref|YP_001323317.1| - 0.0037 17.3 0.7 0.0037 17.3 0.7 2.1 2 1 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|150399550|ref|YP_001323317.1| - 0.0058 15.9 1.8 0.031 13.5 0.0 2.5 2 1 0 2 2 2 1 Anion-transporting ATPase MMR_HSR1 PF01926.23 gi|150399550|ref|YP_001323317.1| - 0.013 15.5 2.7 0.15 12.2 2.7 2.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 gi|150399550|ref|YP_001323317.1| - 0.018 14.9 0.1 0.05 13.5 0.1 1.7 1 0 0 1 1 1 0 NTPase ABC_tran PF00005.27 gi|150399550|ref|YP_001323317.1| - 0.18 12.3 2.2 0.37 11.3 0.1 2.1 1 1 0 2 2 2 0 ABC transporter AAA_16 PF13191.6 gi|150399550|ref|YP_001323317.1| - 0.19 12.1 0.0 4.5 7.6 0.0 2.3 2 1 0 2 2 2 0 AAA ATPase domain WSN PF02206.18 gi|150399550|ref|YP_001323317.1| - 0.22 11.5 6.6 0.44 10.5 0.6 2.9 2 1 0 2 2 2 0 Domain of unknown function IZUMO PF15005.6 gi|150399550|ref|YP_001323317.1| - 0.25 11.9 1.9 0.57 10.7 1.9 1.7 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated AAA_17 PF13207.6 gi|150399550|ref|YP_001323317.1| - 0.29 11.6 2.3 0.52 10.7 0.0 2.5 2 2 0 2 2 2 0 AAA domain EMC3_TMCO1 PF01956.16 gi|150399550|ref|YP_001323317.1| - 5.1 6.8 8.0 1.7 8.4 0.7 2.6 2 1 1 3 3 3 0 Integral membrane protein EMC3/TMCO1-like Amidohydro_1 PF01979.20 gi|150399551|ref|YP_001323318.1| - 1.1e-81 274.9 0.4 1.2e-81 274.7 0.4 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|150399551|ref|YP_001323318.1| - 6.1e-16 58.9 0.0 4.9e-12 46.1 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase family TatD_DNase PF01026.21 gi|150399551|ref|YP_001323318.1| - 4.8e-06 26.1 0.1 1.3e-05 24.7 0.0 1.5 1 1 0 1 1 1 1 TatD related DNase A_deaminase PF00962.22 gi|150399551|ref|YP_001323318.1| - 0.012 15.0 0.0 0.02 14.3 0.0 1.3 1 0 0 1 1 1 0 Adenosine/AMP deaminase AP_endonuc_2 PF01261.24 gi|150399551|ref|YP_001323318.1| - 0.16 11.4 0.0 0.4 10.1 0.0 1.6 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel Pribosyltran PF00156.27 gi|150399552|ref|YP_001323319.1| - 6.2e-13 48.6 2.8 8.4e-13 48.1 2.8 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|150399552|ref|YP_001323319.1| - 0.00018 21.0 0.2 0.0003 20.3 0.2 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Urocanase_N PF17391.2 gi|150399552|ref|YP_001323319.1| - 0.0026 17.5 0.0 0.0042 16.8 0.0 1.3 1 0 0 1 1 1 1 Urocanase N-terminal domain NARG2_C PF10505.9 gi|150399552|ref|YP_001323319.1| - 0.038 13.5 0.1 0.048 13.2 0.1 1.2 1 0 0 1 1 1 0 NMDA receptor-regulated gene protein 2 C-terminus S_layer_C PF05124.12 gi|150399553|ref|YP_001323320.1| - 2.6e-28 99.5 11.8 1.8e-26 93.6 0.8 3.4 3 1 1 4 4 4 2 S-layer like family, C-terminal region BcsB PF03170.13 gi|150399553|ref|YP_001323320.1| - 0.022 13.2 0.2 0.36 9.2 0.0 2.0 1 1 1 2 2 2 0 Bacterial cellulose synthase subunit Parvo_coat_N PF08398.10 gi|150399553|ref|YP_001323320.1| - 0.22 11.7 1.5 0.35 11.1 0.3 1.9 2 0 0 2 2 2 0 Parvovirus coat protein VP1 DUF366 PF04017.12 gi|150399554|ref|YP_001323321.1| - 1.1e-67 227.0 2.3 1.3e-67 226.9 2.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) BPL_LplA_LipB PF03099.19 gi|150399554|ref|YP_001323321.1| - 0.072 13.0 0.0 0.23 11.4 0.0 1.8 2 0 0 2 2 2 0 Biotin/lipoate A/B protein ligase family Radical_SAM_C PF16199.5 gi|150399555|ref|YP_001323322.1| - 1.1e-21 76.6 1.2 1.7e-21 76.0 0.7 1.6 2 0 0 2 2 2 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|150399555|ref|YP_001323322.1| - 3.6e-11 43.7 1.6 5.1e-11 43.2 0.6 1.8 2 1 0 2 2 2 1 Radical SAM superfamily tRNA-synt_2d PF01409.20 gi|150399556|ref|YP_001323323.1| - 5.8e-91 304.3 0.0 7.9e-91 303.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|150399556|ref|YP_001323323.1| - 6e-12 45.5 0.0 3.4e-09 36.5 0.0 2.2 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 gi|150399556|ref|YP_001323323.1| - 7.1e-07 28.6 2.0 5e-05 22.5 0.1 3.4 4 0 0 4 4 4 1 tRNA synthetases class II (D, K and N) AAA_assoc_C PF09821.9 gi|150399556|ref|YP_001323323.1| - 0.07 13.7 1.8 2.3 8.8 0.1 2.9 3 0 0 3 3 3 0 C-terminal AAA-associated domain DUF3236 PF11576.8 gi|150399557|ref|YP_001323324.1| - 1.5e-64 216.3 3.3 1.7e-64 216.2 3.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3236) DUF1188 PF06690.11 gi|150399558|ref|YP_001323325.1| - 1.2e-91 306.7 9.5 1.3e-91 306.5 9.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1188) DnaGprimase_HBD PF16730.5 gi|150399558|ref|YP_001323325.1| - 1.3 9.1 6.0 1.8 8.7 0.4 3.1 2 1 1 3 3 3 0 DnaG-primase C-terminal, helicase-binding domain HTH_3 PF01381.22 gi|150399559|ref|YP_001323326.1| - 0.00017 21.5 0.0 0.0003 20.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix PrpR_N PF06506.11 gi|150399559|ref|YP_001323326.1| - 0.0018 17.8 1.2 0.0037 16.9 0.6 1.7 2 0 0 2 2 2 1 Propionate catabolism activator HTH_psq PF05225.16 gi|150399559|ref|YP_001323326.1| - 0.02 14.6 0.0 0.4 10.5 0.0 2.9 3 0 0 3 3 3 0 helix-turn-helix, Psq domain HTH_26 PF13443.6 gi|150399559|ref|YP_001323326.1| - 0.074 13.5 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain Nitro_FeMo-Co PF02579.17 gi|150399559|ref|YP_001323326.1| - 0.077 13.3 0.2 0.12 12.7 0.2 1.3 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor Tubulin PF00091.25 gi|150399560|ref|YP_001323327.1| - 1.9e-40 139.2 0.7 3.1e-40 138.5 0.7 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|150399560|ref|YP_001323327.1| - 1.3e-33 115.2 0.7 1.3e-33 115.2 0.7 2.7 3 1 0 3 3 3 1 FtsZ family, C-terminal domain ThiF PF00899.21 gi|150399560|ref|YP_001323327.1| - 0.0038 16.6 0.1 0.013 14.8 0.0 1.9 2 0 0 2 2 2 1 ThiF family TrkA_N PF02254.18 gi|150399560|ref|YP_001323327.1| - 0.038 14.2 3.0 0.68 10.2 0.2 3.4 2 1 1 3 3 3 0 TrkA-N domain Tubulin_2 PF13809.6 gi|150399560|ref|YP_001323327.1| - 1.3 8.1 5.9 2.3 7.3 1.2 2.2 1 1 1 2 2 2 0 Tubulin like Metallophos_2 PF12850.7 gi|150399561|ref|YP_001323328.1| - 1.8e-29 103.1 0.0 2e-29 102.9 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|150399561|ref|YP_001323328.1| - 9.9e-06 26.2 0.9 0.014 15.9 0.2 2.3 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase Fer4 PF00037.27 gi|150399562|ref|YP_001323329.1| - 1.5e-16 59.4 41.2 3.7e-09 36.0 5.9 5.9 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399562|ref|YP_001323329.1| - 1.8e-13 50.8 29.6 1.1e-06 29.2 12.0 4.0 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|150399562|ref|YP_001323329.1| - 1.5e-12 47.5 14.7 1.5e-12 47.5 14.7 1.8 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399562|ref|YP_001323329.1| - 2.9e-12 47.3 30.8 0.0027 18.6 1.3 4.3 2 1 2 4 4 4 4 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|150399562|ref|YP_001323329.1| - 4.5e-12 45.5 42.4 7.2e-06 25.8 4.8 4.9 3 1 1 4 4 4 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399562|ref|YP_001323329.1| - 1.9e-11 43.3 33.7 4.1e-05 23.4 2.7 4.8 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_3 PF12798.7 gi|150399562|ref|YP_001323329.1| - 3.8e-10 40.0 38.9 0.0017 19.2 5.5 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399562|ref|YP_001323329.1| - 6.2e-10 39.1 31.0 1.5e-05 25.1 11.2 3.4 1 1 4 5 5 5 5 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399562|ref|YP_001323329.1| - 7.7e-10 38.7 34.9 1e-05 25.6 13.0 3.6 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399562|ref|YP_001323329.1| - 3.7e-09 36.6 35.3 1e-07 32.0 11.8 3.3 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399562|ref|YP_001323329.1| - 3.7e-06 27.0 36.5 0.0018 18.7 2.3 5.1 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399562|ref|YP_001323329.1| - 2e-05 25.0 27.5 0.0081 16.7 1.4 4.3 2 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399562|ref|YP_001323329.1| - 0.00072 20.0 26.5 0.079 13.4 1.1 4.2 3 1 2 5 5 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399562|ref|YP_001323329.1| - 0.0022 18.2 30.9 0.0092 16.2 9.4 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Chromo_shadow PF01393.19 gi|150399562|ref|YP_001323329.1| - 0.16 12.1 0.0 0.39 10.9 0.0 1.6 1 0 0 1 1 1 0 Chromo shadow domain Fer4_20 PF14691.6 gi|150399562|ref|YP_001323329.1| - 3.1 7.6 29.0 0.22 11.3 3.1 4.1 2 1 2 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_11 PF13247.6 gi|150399563|ref|YP_001323330.1| - 2.8e-12 46.6 16.2 2.8e-12 46.6 16.2 2.1 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399563|ref|YP_001323330.1| - 7.3e-12 44.6 35.7 3.4e-10 39.3 2.8 5.2 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399563|ref|YP_001323330.1| - 3.1e-11 42.8 37.0 9.2e-07 28.7 2.0 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399563|ref|YP_001323330.1| - 1.3e-09 37.6 33.8 4.1e-06 26.6 1.0 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399563|ref|YP_001323330.1| - 4.2e-09 36.4 26.5 1.9e-05 24.7 9.3 3.3 3 0 0 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399563|ref|YP_001323330.1| - 2.5e-08 34.4 35.0 4.6e-05 23.9 13.6 3.9 1 1 4 5 5 5 4 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399563|ref|YP_001323330.1| - 3.1e-08 33.6 31.0 0.00058 19.9 11.1 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399563|ref|YP_001323330.1| - 3.6e-08 33.4 33.7 5.6e-05 23.2 11.0 3.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399563|ref|YP_001323330.1| - 1.4e-06 28.8 45.0 0.051 14.5 6.0 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_16 PF13484.6 gi|150399563|ref|YP_001323330.1| - 7.6e-06 26.8 30.2 0.036 15.0 1.2 4.3 3 1 0 3 3 3 3 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|150399563|ref|YP_001323330.1| - 0.00033 21.1 9.0 0.0017 18.9 0.9 4.2 4 1 0 4 4 4 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|150399563|ref|YP_001323330.1| - 0.00071 19.9 2.2 0.00071 19.9 2.2 5.0 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|150399563|ref|YP_001323330.1| - 0.0018 19.0 1.8 0.0018 19.0 1.8 4.1 3 1 1 4 4 4 2 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|150399563|ref|YP_001323330.1| - 0.022 15.3 1.9 0.022 15.3 1.9 4.4 2 1 2 4 4 4 0 4Fe-4S dicluster domain TPP_enzyme_C PF02775.21 gi|150399564|ref|YP_001323331.1| - 5.9e-28 97.6 0.6 1.2e-27 96.6 0.6 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|150399564|ref|YP_001323331.1| - 0.0089 15.3 0.1 0.011 14.9 0.1 1.3 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase POR_N PF01855.19 gi|150399565|ref|YP_001323332.1| - 1.6e-80 270.2 0.9 2e-80 269.9 0.9 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|150399565|ref|YP_001323332.1| - 1.8e-30 105.3 0.1 3.8e-30 104.2 0.1 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|150399565|ref|YP_001323332.1| - 4e-06 26.7 0.1 9.1e-06 25.6 0.1 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fer4 PF00037.27 gi|150399566|ref|YP_001323333.1| - 8.7e-13 47.5 18.1 2.8e-07 30.0 3.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399566|ref|YP_001323333.1| - 1.2e-09 37.8 16.3 2.3e-05 24.2 2.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399566|ref|YP_001323333.1| - 5.8e-09 36.0 12.4 7.6e-09 35.6 12.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399566|ref|YP_001323333.1| - 9e-08 31.8 8.7 0.0011 18.9 1.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399566|ref|YP_001323333.1| - 2.2e-07 30.9 36.9 7e-05 22.9 14.8 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399566|ref|YP_001323333.1| - 8.6e-07 29.0 24.9 5.8e-05 23.1 15.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399566|ref|YP_001323333.1| - 1.3e-06 28.9 12.6 2.8e-05 24.6 13.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399566|ref|YP_001323333.1| - 5.7e-06 27.2 13.9 0.01 16.8 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|150399566|ref|YP_001323333.1| - 0.00026 21.4 6.9 0.1 13.1 0.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399566|ref|YP_001323333.1| - 0.0031 18.0 8.9 0.22 12.1 1.0 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399566|ref|YP_001323333.1| - 0.01 16.3 17.4 0.12 12.9 6.0 2.4 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|150399566|ref|YP_001323333.1| - 0.078 13.5 2.4 0.078 13.5 2.4 2.7 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I CH_2 PF06294.11 gi|150399566|ref|YP_001323333.1| - 0.14 12.3 0.0 0.16 12.1 0.0 1.3 1 1 0 1 1 1 0 CH-like domain in sperm protein Fer4_15 PF13459.6 gi|150399566|ref|YP_001323333.1| - 0.6 10.9 16.8 2.6 8.8 3.8 3.0 1 1 2 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|150399566|ref|YP_001323333.1| - 3 9.0 19.9 4.9 8.3 3.7 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain POR PF01558.18 gi|150399567|ref|YP_001323334.1| - 6.3e-37 127.3 0.1 8.9e-37 126.9 0.1 1.2 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase YitT_membrane PF02588.15 gi|150399568|ref|YP_001323335.1| - 3.5e-66 222.5 19.0 4.4e-66 222.2 19.0 1.1 1 0 0 1 1 1 1 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DUF2179 PF10035.9 gi|150399568|ref|YP_001323335.1| - 1e-24 86.0 0.8 2.2e-24 84.9 0.8 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2179) ABC2_membrane_5 PF13346.6 gi|150399568|ref|YP_001323335.1| - 9.4 5.7 24.4 0.22 11.0 15.7 2.1 2 0 0 2 2 2 0 ABC-2 family transporter protein DUF357 PF04010.13 gi|150399569|ref|YP_001323336.1| - 6.9e-26 90.1 0.1 8.3e-26 89.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF357) DUF555 PF04475.12 gi|150399570|ref|YP_001323337.1| - 2.2e-44 149.9 0.2 2.5e-44 149.7 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF555) zf-ribbon_3 PF13248.6 gi|150399570|ref|YP_001323337.1| - 0.062 12.7 0.1 0.098 12.1 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain SBP_bac_3 PF00497.20 gi|150399571|ref|YP_001323338.1| - 1.1e-44 152.5 0.0 1.3e-44 152.3 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.11 gi|150399571|ref|YP_001323338.1| - 0.00012 22.1 0.0 0.00018 21.6 0.0 1.3 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|150399571|ref|YP_001323338.1| - 0.00054 19.6 0.0 0.0016 18.1 0.0 1.7 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Lig_chan-Glu_bd PF10613.9 gi|150399571|ref|YP_001323338.1| - 0.022 14.9 0.4 0.26 11.5 0.1 2.7 1 1 1 2 2 2 0 Ligated ion channel L-glutamate- and glycine-binding site Amidase PF01425.21 gi|150399573|ref|YP_001323340.1| - 1.1e-117 393.8 0.0 1.2e-117 393.6 0.0 1.0 1 0 0 1 1 1 1 Amidase Na_Ala_symp PF01235.17 gi|150399574|ref|YP_001323341.1| - 4.7e-136 454.2 33.2 6e-136 453.8 33.2 1.1 1 0 0 1 1 1 1 Sodium:alanine symporter family Ala_racemase_N PF01168.20 gi|150399575|ref|YP_001323342.1| - 2.9e-69 233.0 0.0 3.7e-69 232.7 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Ala_racemase_C PF00842.21 gi|150399575|ref|YP_001323342.1| - 1.3e-46 157.4 0.3 2.4e-46 156.6 0.3 1.4 1 0 0 1 1 1 1 Alanine racemase, C-terminal domain Syntaxin PF00804.25 gi|150399575|ref|YP_001323342.1| - 0.019 14.6 0.7 0.019 14.6 0.7 1.6 2 0 0 2 2 2 0 Syntaxin BORCS7 PF16088.5 gi|150399575|ref|YP_001323342.1| - 0.098 12.9 1.6 2.5 8.4 0.2 2.5 2 0 0 2 2 2 0 BLOC-1-related complex sub-unit 7 Prefoldin PF02996.17 gi|150399575|ref|YP_001323342.1| - 0.16 11.9 1.9 4.9 7.1 0.1 2.6 2 0 0 2 2 2 0 Prefoldin subunit AlaDh_PNT_C PF01262.21 gi|150399576|ref|YP_001323343.1| - 2.7e-85 285.0 6.0 3.5e-85 284.7 6.0 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain AlaDh_PNT_N PF05222.15 gi|150399576|ref|YP_001323343.1| - 3.4e-48 163.4 0.2 6.9e-48 162.4 0.0 1.6 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, N-terminal domain 2-Hacid_dh_C PF02826.19 gi|150399576|ref|YP_001323343.1| - 9.2e-07 28.4 0.4 2.1e-06 27.2 0.4 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|150399576|ref|YP_001323343.1| - 2.3e-06 28.0 0.5 5.5e-06 26.8 0.5 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|150399576|ref|YP_001323343.1| - 7.1e-06 25.5 0.3 1.3e-05 24.6 0.3 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase THF_DHG_CYH_C PF02882.19 gi|150399576|ref|YP_001323343.1| - 9.7e-05 21.7 4.9 0.0011 18.3 0.7 2.5 1 1 1 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Shikimate_DH PF01488.20 gi|150399576|ref|YP_001323343.1| - 0.00023 21.2 0.2 0.00048 20.2 0.2 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase ADH_zinc_N PF00107.26 gi|150399576|ref|YP_001323343.1| - 0.0016 18.4 0.5 0.0054 16.7 0.5 1.9 1 1 0 1 1 1 1 Zinc-binding dehydrogenase 3HCDH_N PF02737.18 gi|150399576|ref|YP_001323343.1| - 0.002 18.1 0.5 0.0037 17.2 0.5 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|150399576|ref|YP_001323343.1| - 0.0041 17.5 0.4 0.0083 16.6 0.4 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding GIDA PF01134.22 gi|150399576|ref|YP_001323343.1| - 0.0041 16.3 0.5 0.0059 15.7 0.5 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_2 PF03446.15 gi|150399576|ref|YP_001323343.1| - 0.021 15.0 2.3 0.035 14.3 1.4 1.8 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase FAD_oxidored PF12831.7 gi|150399576|ref|YP_001323343.1| - 0.058 12.7 3.2 0.08 12.3 3.2 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|150399576|ref|YP_001323343.1| - 0.1 12.9 0.8 0.45 10.8 0.5 2.2 2 1 1 3 3 2 0 NAD(P)-binding Rossmann-like domain UDPG_MGDP_dh_N PF03721.14 gi|150399576|ref|YP_001323343.1| - 0.54 9.8 4.9 4 7.0 4.9 2.2 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DAO PF01266.24 gi|150399576|ref|YP_001323343.1| - 0.8 9.2 2.7 1.3 8.5 2.7 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase SH3_2 PF07653.17 gi|150399577|ref|YP_001323344.1| - 3.5e-08 33.0 0.7 1.8e-07 30.8 0.2 2.0 2 0 0 2 2 2 1 Variant SH3 domain SH3_9 PF14604.6 gi|150399577|ref|YP_001323344.1| - 9.7e-06 25.4 0.6 0.0063 16.4 0.1 2.3 2 0 0 2 2 2 2 Variant SH3 domain SH3_1 PF00018.28 gi|150399577|ref|YP_001323344.1| - 0.00071 19.1 4.9 0.0027 17.3 0.8 2.7 3 0 0 3 3 3 1 SH3 domain SH3_3 PF08239.11 gi|150399577|ref|YP_001323344.1| - 0.22 11.8 3.4 0.25 11.6 0.7 2.1 1 1 1 2 2 2 0 Bacterial SH3 domain PDH PF02153.17 gi|150399578|ref|YP_001323345.1| - 1.4e-74 250.4 0.1 2e-74 249.9 0.1 1.2 1 0 0 1 1 1 1 Prephenate dehydrogenase F420_oxidored PF03807.17 gi|150399578|ref|YP_001323345.1| - 6.2e-10 39.5 1.3 1.5e-09 38.3 0.1 2.2 3 0 0 3 3 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|150399578|ref|YP_001323345.1| - 1e-07 32.2 0.1 4e-07 30.3 0.0 2.1 3 0 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|150399578|ref|YP_001323345.1| - 2.3e-05 24.0 0.0 6.9e-05 22.5 0.0 1.7 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain adh_short PF00106.25 gi|150399578|ref|YP_001323345.1| - 0.0015 18.0 0.1 0.0061 16.0 0.0 2.1 3 0 0 3 3 3 1 short chain dehydrogenase FDX-ACB PF03147.14 gi|150399578|ref|YP_001323345.1| - 0.0015 18.9 0.5 0.0094 16.4 0.1 2.6 4 0 0 4 4 2 1 Ferredoxin-fold anticodon binding domain DUF2642 PF10842.8 gi|150399578|ref|YP_001323345.1| - 0.0082 16.0 0.1 0.3 10.9 0.0 2.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2642) Glyco_trans_4_2 PF13477.6 gi|150399578|ref|YP_001323345.1| - 0.023 14.8 1.8 1.8 8.6 0.3 3.1 3 1 0 3 3 3 0 Glycosyl transferase 4-like DpaA_N PF16924.5 gi|150399578|ref|YP_001323345.1| - 0.024 14.7 0.1 0.19 11.8 0.0 2.3 2 0 0 2 2 2 0 Dipicolinate synthase subunit A N-terminal domain ApbA PF02558.16 gi|150399578|ref|YP_001323345.1| - 0.025 14.2 0.0 0.072 12.7 0.0 1.8 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|150399578|ref|YP_001323345.1| - 0.034 14.1 0.1 0.097 12.6 0.1 1.8 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ADH_zinc_N PF00107.26 gi|150399578|ref|YP_001323345.1| - 0.061 13.3 0.0 3.5 7.6 0.0 2.8 3 0 0 3 3 3 0 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 gi|150399578|ref|YP_001323345.1| - 0.12 11.8 0.1 0.64 9.4 0.0 2.3 4 0 0 4 4 4 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|150399578|ref|YP_001323345.1| - 0.12 12.9 0.0 0.38 11.2 0.0 2.0 1 0 0 1 1 1 0 Putative NAD(P)-binding KR PF08659.10 gi|150399578|ref|YP_001323345.1| - 0.18 11.7 0.0 0.4 10.6 0.0 1.6 1 0 0 1 1 1 0 KR domain Cpn60_TCP1 PF00118.24 gi|150399579|ref|YP_001323346.1| - 1.5e-179 597.8 30.9 1.7e-179 597.6 30.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF915 PF06028.11 gi|150399579|ref|YP_001323346.1| - 0.085 12.2 0.6 1.3 8.3 0.1 2.2 1 1 1 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) SMC_ScpA PF02616.14 gi|150399580|ref|YP_001323347.1| - 3.3e-14 53.4 5.5 2.9e-12 47.0 5.5 2.4 1 1 0 1 1 1 1 Segregation and condensation protein ScpA GP3_package PF16677.5 gi|150399580|ref|YP_001323347.1| - 0.029 14.5 0.1 0.048 13.8 0.1 1.4 1 0 0 1 1 1 0 DNA-packaging protein gp3 Rad21_Rec8 PF04824.16 gi|150399580|ref|YP_001323347.1| - 0.048 13.0 0.1 0.15 11.4 0.0 1.8 2 0 0 2 2 2 0 Conserved region of Rad21 / Rec8 like protein GnsAB_toxin PF08178.11 gi|150399580|ref|YP_001323347.1| - 0.1 12.6 0.4 0.1 12.6 0.4 2.1 2 0 0 2 2 2 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system DUF3740 PF12548.8 gi|150399580|ref|YP_001323347.1| - 0.2 12.1 2.1 0.38 11.2 2.1 1.4 1 0 0 1 1 1 0 Sulfatase protein Peptidase_M50 PF02163.22 gi|150399581|ref|YP_001323348.1| - 4.5e-08 32.7 8.8 0.0023 17.3 0.2 3.2 2 1 1 3 3 3 3 Peptidase family M50 DUF1523 PF07509.11 gi|150399581|ref|YP_001323348.1| - 0.032 13.6 1.3 0.069 12.5 1.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1523) DUF3267 PF11667.8 gi|150399581|ref|YP_001323348.1| - 0.69 10.2 14.8 0.062 13.6 7.6 2.8 1 1 1 2 2 2 0 Putative zincin peptidase ABC_tran PF00005.27 gi|150399582|ref|YP_001323349.1| - 8.2e-32 110.6 0.0 1.7e-31 109.5 0.0 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|150399582|ref|YP_001323349.1| - 2.9e-07 30.1 0.3 0.016 14.7 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|150399582|ref|YP_001323349.1| - 6.2e-06 25.9 0.0 1.4e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|150399582|ref|YP_001323349.1| - 0.00081 19.3 1.9 0.28 11.0 0.3 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|150399582|ref|YP_001323349.1| - 0.0022 18.6 0.5 0.0038 17.8 0.4 1.8 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|150399582|ref|YP_001323349.1| - 0.0045 16.9 0.0 0.0091 15.9 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|150399582|ref|YP_001323349.1| - 0.0074 16.7 0.0 0.015 15.7 0.0 1.4 2 0 0 2 2 2 1 AAA ATPase domain Mg_chelatase PF01078.21 gi|150399582|ref|YP_001323349.1| - 0.048 13.0 0.0 0.079 12.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 gi|150399582|ref|YP_001323349.1| - 0.2 11.3 0.0 0.7 9.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 gi|150399583|ref|YP_001323350.1| - 4.9e-20 72.1 12.9 4.9e-20 72.1 12.9 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component cobW PF02492.19 gi|150399584|ref|YP_001323351.1| - 1.9e-24 86.2 0.4 2.5e-24 85.8 0.4 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|150399584|ref|YP_001323351.1| - 2.3e-06 26.8 0.8 2.9e-05 23.2 0.8 2.0 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 gi|150399584|ref|YP_001323351.1| - 0.00069 19.5 0.2 0.4 10.6 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase MobB PF03205.14 gi|150399584|ref|YP_001323351.1| - 0.0061 16.5 0.0 0.018 14.9 0.0 2.0 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 gi|150399584|ref|YP_001323351.1| - 0.011 15.6 0.0 0.031 14.2 0.0 1.8 2 0 0 2 2 2 0 NTPase MnmE_helical PF12631.7 gi|150399584|ref|YP_001323351.1| - 0.023 14.9 0.0 0.03 14.5 0.0 1.1 1 0 0 1 1 1 0 MnmE helical domain Arf PF00025.21 gi|150399584|ref|YP_001323351.1| - 0.05 13.1 0.1 0.089 12.2 0.1 1.4 1 0 0 1 1 1 0 ADP-ribosylation factor family AAA PF00004.29 gi|150399584|ref|YP_001323351.1| - 0.057 13.8 0.2 0.15 12.5 0.2 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF2120 PF09893.9 gi|150399585|ref|YP_001323352.1| - 1.3e-39 135.4 1.7 1.5e-39 135.2 1.7 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2120) DHR-2 PF06920.13 gi|150399585|ref|YP_001323352.1| - 0.088 11.4 0.0 0.1 11.2 0.0 1.0 1 0 0 1 1 1 0 Dock homology region 2 LPG_synthase_TM PF03706.13 gi|150399586|ref|YP_001323353.1| - 6e-57 193.5 16.3 7.2e-57 193.2 16.3 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region SecD_SecF PF02355.16 gi|150399587|ref|YP_001323354.1| - 6e-16 58.4 12.1 1.4e-15 57.2 12.1 1.5 1 1 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|150399587|ref|YP_001323354.1| - 2.5e-06 26.8 0.4 5.3e-06 25.7 0.4 1.6 1 0 0 1 1 1 1 SecD/SecF GG Motif MMPL PF03176.15 gi|150399587|ref|YP_001323354.1| - 0.0047 15.9 10.5 0.0082 15.1 10.5 1.3 1 0 0 1 1 1 1 MMPL family Patched PF02460.18 gi|150399587|ref|YP_001323354.1| - 0.12 10.4 11.2 0.18 9.8 11.2 1.2 1 0 0 1 1 1 0 Patched family DUF4265 PF14085.6 gi|150399587|ref|YP_001323354.1| - 0.15 12.0 0.0 0.34 10.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) SecD_SecF PF02355.16 gi|150399588|ref|YP_001323355.1| - 8.8e-38 129.6 14.4 8.8e-38 129.6 14.4 1.4 2 0 0 2 2 2 1 Protein export membrane protein Patched PF02460.18 gi|150399588|ref|YP_001323355.1| - 1.1e-07 30.4 8.6 1.4e-07 30.0 8.6 1.1 1 0 0 1 1 1 1 Patched family DEK_C PF08766.11 gi|150399588|ref|YP_001323355.1| - 0.057 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 DEK C terminal domain PmbA_TldD PF01523.16 gi|150399589|ref|YP_001323356.1| - 4.8e-53 180.8 4.6 6e-53 180.5 4.6 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Ribonucleas_3_3 PF14622.6 gi|150399590|ref|YP_001323357.1| - 1.9e-33 115.3 0.0 2.9e-33 114.8 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.26 gi|150399590|ref|YP_001323357.1| - 7.6e-21 74.7 0.1 1.6e-20 73.6 0.1 1.6 1 0 0 1 1 1 1 Ribonuclease III domain dsrm PF00035.26 gi|150399590|ref|YP_001323357.1| - 4.9e-16 59.2 0.1 8.7e-16 58.4 0.1 1.4 1 0 0 1 1 1 1 Double-stranded RNA binding motif Aminotran_1_2 PF00155.21 gi|150399591|ref|YP_001323358.1| - 7.8e-37 127.3 0.0 9.9e-37 126.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PDT PF00800.18 gi|150399592|ref|YP_001323359.1| - 5.4e-54 182.8 0.0 6.7e-54 182.5 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|150399592|ref|YP_001323359.1| - 7.8e-07 28.8 0.0 1.6e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 ACT domain Methyltransf_11 PF08241.12 gi|150399593|ref|YP_001323360.1| - 4e-16 59.4 0.0 6.6e-16 58.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|150399593|ref|YP_001323360.1| - 1.4e-11 45.0 0.0 2.3e-11 44.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|150399593|ref|YP_001323360.1| - 9.2e-11 41.9 0.0 1.4e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|150399593|ref|YP_001323360.1| - 9e-10 38.5 0.8 1.5e-08 34.6 0.2 2.4 1 1 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|150399593|ref|YP_001323360.1| - 2.6e-08 34.5 0.0 4.8e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|150399593|ref|YP_001323360.1| - 8e-05 22.6 0.0 0.00012 22.0 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_29 PF03141.16 gi|150399593|ref|YP_001323360.1| - 0.00048 18.8 0.0 0.0015 17.2 0.0 1.6 1 1 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase MetW PF07021.12 gi|150399593|ref|YP_001323360.1| - 0.072 12.7 0.0 0.12 11.9 0.0 1.4 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW DUF2344 PF10105.9 gi|150399594|ref|YP_001323361.1| - 0.17 11.7 0.1 19 5.1 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2344) AIRS PF00586.24 gi|150399595|ref|YP_001323362.1| - 1.3e-16 61.0 0.1 8.9e-16 58.3 0.2 2.1 2 1 0 3 3 3 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|150399595|ref|YP_001323362.1| - 4.9e-14 52.7 0.0 7.7e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain RhoGEF67_u1 PF16615.5 gi|150399595|ref|YP_001323362.1| - 0.17 12.4 0.0 0.31 11.6 0.0 1.3 1 0 0 1 1 1 0 Unstructured region one on RhoGEF 6 and 7 PGK PF00162.19 gi|150399596|ref|YP_001323363.1| - 1.9e-111 372.7 0.7 2.2e-111 372.5 0.7 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase RE_SinI PF09570.10 gi|150399597|ref|YP_001323364.1| - 0.014 14.6 0.3 0.017 14.4 0.3 1.2 1 0 0 1 1 1 0 SinI restriction endonuclease AAA_18 PF13238.6 gi|150399598|ref|YP_001323365.1| - 5.5e-27 94.9 0.2 7.5e-27 94.4 0.2 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|150399598|ref|YP_001323365.1| - 5e-06 27.0 0.1 0.0011 19.5 0.1 2.4 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|150399598|ref|YP_001323365.1| - 8.1e-05 23.1 0.0 0.00021 21.7 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|150399598|ref|YP_001323365.1| - 0.0001 22.3 1.8 0.00022 21.2 0.3 2.1 2 1 0 2 2 2 1 NTPase AAA_22 PF13401.6 gi|150399598|ref|YP_001323365.1| - 0.00013 22.2 0.1 0.00067 19.9 0.0 1.9 1 1 0 2 2 2 1 AAA domain AAA_14 PF13173.6 gi|150399598|ref|YP_001323365.1| - 0.00036 20.6 1.1 0.00074 19.6 0.4 1.8 1 1 1 2 2 2 1 AAA domain dNK PF01712.19 gi|150399598|ref|YP_001323365.1| - 0.00043 20.2 2.2 0.23 11.3 0.1 2.2 1 1 1 2 2 2 2 Deoxynucleoside kinase AAA_28 PF13521.6 gi|150399598|ref|YP_001323365.1| - 0.00055 20.2 0.0 0.00069 19.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|150399598|ref|YP_001323365.1| - 0.00092 19.0 0.2 0.0015 18.3 0.2 1.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|150399598|ref|YP_001323365.1| - 0.00099 19.3 0.0 0.031 14.4 0.0 2.1 1 1 1 2 2 2 1 AAA domain KTI12 PF08433.10 gi|150399598|ref|YP_001323365.1| - 0.0013 18.3 0.0 0.0019 17.7 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_5 PF07728.14 gi|150399598|ref|YP_001323365.1| - 0.0019 18.2 0.1 0.085 12.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 gi|150399598|ref|YP_001323365.1| - 0.0046 16.2 0.1 0.0084 15.3 0.0 1.5 2 0 0 2 2 2 1 NB-ARC domain AAA_7 PF12775.7 gi|150399598|ref|YP_001323365.1| - 0.0046 16.5 0.1 0.0069 15.9 0.1 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region Thymidylate_kin PF02223.17 gi|150399598|ref|YP_001323365.1| - 0.0052 16.5 0.0 1.6 8.3 0.0 2.2 2 0 0 2 2 2 1 Thymidylate kinase PRK PF00485.18 gi|150399598|ref|YP_001323365.1| - 0.0053 16.5 0.0 0.0079 16.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Septin PF00735.18 gi|150399598|ref|YP_001323365.1| - 0.0054 16.1 0.3 0.0054 16.1 0.3 1.4 2 0 0 2 2 2 1 Septin MeaB PF03308.16 gi|150399598|ref|YP_001323365.1| - 0.0064 15.5 0.0 0.01 14.8 0.0 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB FeoB_N PF02421.18 gi|150399598|ref|YP_001323365.1| - 0.0067 16.0 0.9 0.0083 15.7 0.9 1.4 1 1 0 1 1 1 1 Ferrous iron transport protein B MMR_HSR1 PF01926.23 gi|150399598|ref|YP_001323365.1| - 0.0092 16.0 1.4 0.012 15.7 1.4 1.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase RNA_helicase PF00910.22 gi|150399598|ref|YP_001323365.1| - 0.023 15.1 0.0 0.041 14.3 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Viral_helicase1 PF01443.18 gi|150399598|ref|YP_001323365.1| - 0.029 14.1 0.0 0.049 13.4 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase TM1586_NiRdase PF14512.6 gi|150399598|ref|YP_001323365.1| - 0.032 13.8 1.9 0.039 13.5 0.1 1.8 2 0 0 2 2 2 0 Putative TM nitroreductase AAA_19 PF13245.6 gi|150399598|ref|YP_001323365.1| - 0.037 14.4 0.0 0.047 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|150399598|ref|YP_001323365.1| - 0.037 14.5 1.0 0.049 14.1 0.9 1.3 1 1 0 1 1 1 0 ABC transporter TPR_22 PF18833.1 gi|150399598|ref|YP_001323365.1| - 0.044 13.9 0.1 0.085 13.0 0.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF2075 PF09848.9 gi|150399598|ref|YP_001323365.1| - 0.046 13.0 0.0 0.06 12.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) IstB_IS21 PF01695.17 gi|150399598|ref|YP_001323365.1| - 0.047 13.4 0.0 0.072 12.8 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF87 PF01935.17 gi|150399598|ref|YP_001323365.1| - 0.048 13.8 0.4 0.11 12.6 0.1 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_16 PF13191.6 gi|150399598|ref|YP_001323365.1| - 0.1 13.0 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain Mg_chelatase PF01078.21 gi|150399598|ref|YP_001323365.1| - 0.12 11.8 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|150399598|ref|YP_001323365.1| - 0.16 11.6 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain CbiA PF01656.23 gi|150399598|ref|YP_001323365.1| - 0.19 11.8 1.1 0.32 11.1 1.1 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain TctA PF01970.16 gi|150399599|ref|YP_001323366.1| - 3.2e-49 167.8 36.3 3.8e-49 167.5 36.3 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family tRNA_anti-codon PF01336.25 gi|150399600|ref|YP_001323367.1| - 1.1e-06 28.5 0.2 0.00018 21.5 0.1 2.3 1 1 1 2 2 2 2 OB-fold nucleic acid binding domain DUF4131 PF13567.6 gi|150399600|ref|YP_001323367.1| - 0.0031 17.2 0.0 0.005 16.5 0.0 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4131) SH3_2 PF07653.17 gi|150399600|ref|YP_001323367.1| - 0.014 15.1 0.1 5.6 6.7 0.0 2.4 2 0 0 2 2 2 0 Variant SH3 domain RNA_pol_Rpb5_C PF01191.19 gi|150399600|ref|YP_001323367.1| - 0.095 12.6 0.1 14 5.6 0.0 2.5 2 0 0 2 2 2 0 RNA polymerase Rpb5, C-terminal domain Sulf_transp PF04143.14 gi|150399601|ref|YP_001323368.1| - 1.6e-06 27.9 8.5 0.00099 18.8 0.6 2.1 1 1 1 2 2 2 2 Sulphur transport Gly-zipper_YMGG PF13441.6 gi|150399601|ref|YP_001323368.1| - 0.015 15.1 6.4 0.25 11.1 0.1 2.6 2 0 0 2 2 2 0 YMGG-like Gly-zipper HCV_core PF01542.18 gi|150399601|ref|YP_001323368.1| - 0.77 10.2 6.0 4.4 7.8 1.3 3.2 1 1 1 3 3 3 0 Hepatitis C virus core protein Coiled-coil_56 PF09813.9 gi|150399601|ref|YP_001323368.1| - 3.9 7.6 4.0 2.1 8.4 0.1 2.2 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 56 Gly-zipper_Omp PF13488.6 gi|150399601|ref|YP_001323368.1| - 4.5 7.3 13.2 1.1 9.4 0.2 2.9 3 0 0 3 3 3 0 Glycine zipper OATP PF03137.20 gi|150399601|ref|YP_001323368.1| - 7.5 4.7 6.6 0.57 8.4 1.6 1.6 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Sulf_transp PF04143.14 gi|150399602|ref|YP_001323369.1| - 1.8e-07 31.1 16.8 3.2e-07 30.2 16.8 1.4 1 1 0 1 1 1 1 Sulphur transport DUF3343 PF11823.8 gi|150399603|ref|YP_001323370.1| - 3.3e-12 45.7 0.0 6.5e-12 44.7 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3343) DUF3383 PF11863.8 gi|150399603|ref|YP_001323370.1| - 0.27 10.2 0.1 0.38 9.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3383) Carb_kinase PF01256.17 gi|150399604|ref|YP_001323371.1| - 7.4e-08 32.2 0.0 1.1e-07 31.6 0.0 1.3 1 0 0 1 1 1 1 Carbohydrate kinase DUF4870 PF09685.10 gi|150399605|ref|YP_001323372.1| - 4.2e-07 30.1 5.8 5.3e-07 29.7 5.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4870) TIC20 PF16166.5 gi|150399605|ref|YP_001323372.1| - 0.00075 19.3 2.2 0.001 18.9 2.2 1.3 1 0 0 1 1 1 1 Chloroplast import apparatus Tic20-like DUF2208 PF09973.9 gi|150399605|ref|YP_001323372.1| - 0.028 14.0 4.8 0.033 13.8 4.0 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2208) FA_desaturase PF00487.24 gi|150399605|ref|YP_001323372.1| - 0.22 11.3 2.0 0.26 11.1 2.0 1.1 1 0 0 1 1 1 0 Fatty acid desaturase 2TM PF13239.6 gi|150399605|ref|YP_001323372.1| - 2.5 8.5 6.8 3.8 7.9 6.8 1.5 1 1 0 1 1 1 0 2TM domain Translin PF01997.16 gi|150399606|ref|YP_001323373.1| - 2.6e-11 43.9 4.8 2.6e-10 40.6 4.8 2.1 1 1 0 1 1 1 1 Translin family Ribosomal_L3 PF00297.22 gi|150399607|ref|YP_001323374.1| - 2.6e-92 309.6 7.4 3.3e-92 309.3 7.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.22 gi|150399608|ref|YP_001323375.1| - 1.4e-43 148.8 1.6 1.6e-43 148.7 1.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.20 gi|150399609|ref|YP_001323376.1| - 6.7e-17 61.6 7.8 4.8e-16 58.9 7.8 1.9 1 1 0 1 1 1 1 Ribosomal protein L23 NKWYS PF10364.9 gi|150399609|ref|YP_001323376.1| - 0.009 16.1 0.9 0.01 16.0 0.9 1.0 1 0 0 1 1 1 1 Putative capsular polysaccharide synthesis protein HP0268 PF18618.1 gi|150399609|ref|YP_001323376.1| - 0.04 14.3 1.1 0.049 14.1 0.9 1.3 1 1 0 1 1 1 0 HP0268 BpuSI_N PF15516.6 gi|150399609|ref|YP_001323376.1| - 0.071 13.0 0.1 0.078 12.9 0.1 1.1 1 0 0 1 1 1 0 BpuSI N-terminal domain DUF2785 PF10978.8 gi|150399609|ref|YP_001323376.1| - 0.077 12.8 0.1 0.077 12.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2785) TusA PF01206.17 gi|150399609|ref|YP_001323376.1| - 0.15 11.9 0.4 0.19 11.6 0.4 1.3 1 1 0 1 1 1 0 Sulfurtransferase TusA Ribosomal_L2_C PF03947.18 gi|150399610|ref|YP_001323377.1| - 1.7e-44 151.1 2.9 2.7e-44 150.4 2.5 1.5 2 0 0 2 2 2 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|150399610|ref|YP_001323377.1| - 5.8e-21 74.2 0.1 1.8e-20 72.7 0.0 1.9 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.21 gi|150399611|ref|YP_001323378.1| - 4.2e-22 77.8 0.3 6.4e-22 77.2 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Fumerase_C PF05683.12 gi|150399612|ref|YP_001323379.1| - 5.4e-43 146.7 0.0 6.2e-43 146.5 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus AP_endonuc_2 PF01261.24 gi|150399613|ref|YP_001323380.1| - 5.8e-25 88.0 0.0 7.2e-25 87.7 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel F420_oxidored PF03807.17 gi|150399614|ref|YP_001323381.1| - 1.7e-19 70.2 0.4 1.7e-19 70.2 0.4 2.0 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.23 gi|150399614|ref|YP_001323381.1| - 0.0003 20.8 0.1 0.00063 19.7 0.1 1.7 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PDH PF02153.17 gi|150399614|ref|YP_001323381.1| - 0.0048 15.9 0.0 0.0071 15.4 0.0 1.3 1 0 0 1 1 1 1 Prephenate dehydrogenase IlvN PF07991.12 gi|150399614|ref|YP_001323381.1| - 0.0054 16.3 0.2 0.022 14.3 0.2 1.9 1 1 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Complex1_51K PF01512.17 gi|150399614|ref|YP_001323381.1| - 0.0074 16.2 0.2 0.014 15.2 0.2 1.5 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit Semialdhyde_dh PF01118.24 gi|150399614|ref|YP_001323381.1| - 0.014 15.8 0.1 0.029 14.8 0.1 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain ApbA PF02558.16 gi|150399614|ref|YP_001323381.1| - 0.035 13.8 0.2 0.14 11.8 0.2 1.9 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA SRP54 PF00448.22 gi|150399615|ref|YP_001323382.1| - 1.1e-73 247.0 1.5 2.3e-73 246.0 1.5 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|150399615|ref|YP_001323382.1| - 2.4e-29 101.9 8.6 2.2e-28 98.8 2.3 3.3 3 0 0 3 3 3 1 Signal peptide binding domain SRP54_N PF02881.19 gi|150399615|ref|YP_001323382.1| - 2.6e-17 62.8 6.2 1.2e-16 60.6 3.2 3.5 3 1 0 3 3 2 1 SRP54-type protein, helical bundle domain cobW PF02492.19 gi|150399615|ref|YP_001323382.1| - 4.9e-07 29.5 1.6 2.3e-06 27.3 1.6 2.0 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.23 gi|150399615|ref|YP_001323382.1| - 7.6e-06 26.0 0.0 2.2e-05 24.5 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_17 PF13207.6 gi|150399615|ref|YP_001323382.1| - 1.2e-05 25.8 0.7 1.2e-05 25.8 0.7 2.9 3 0 0 3 3 2 1 AAA domain AAA_22 PF13401.6 gi|150399615|ref|YP_001323382.1| - 1.5e-05 25.3 0.0 4e-05 23.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain 6PF2K PF01591.18 gi|150399615|ref|YP_001323382.1| - 5.5e-05 22.6 0.4 0.00062 19.1 0.0 2.5 3 0 0 3 3 3 1 6-phosphofructo-2-kinase CLP1_P PF16575.5 gi|150399615|ref|YP_001323382.1| - 8.9e-05 22.4 0.2 0.27 11.0 0.0 2.9 2 1 1 3 3 3 2 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_24 PF13479.6 gi|150399615|ref|YP_001323382.1| - 0.00014 21.7 0.2 0.00033 20.4 0.2 1.7 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|150399615|ref|YP_001323382.1| - 0.00024 20.5 0.7 0.00054 19.3 0.1 2.0 2 0 0 2 2 2 1 Zeta toxin AAA_30 PF13604.6 gi|150399615|ref|YP_001323382.1| - 0.0003 20.6 0.1 0.00063 19.5 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|150399615|ref|YP_001323382.1| - 0.0006 20.2 0.0 0.0012 19.2 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain SWI2_SNF2 PF18766.1 gi|150399615|ref|YP_001323382.1| - 0.0013 18.4 1.3 0.0018 18.0 0.3 1.7 1 1 1 2 2 2 1 SWI2/SNF2 ATPase G-alpha PF00503.20 gi|150399615|ref|YP_001323382.1| - 0.0017 17.6 1.0 0.0034 16.6 0.4 1.6 1 1 0 1 1 1 1 G-protein alpha subunit AAA_33 PF13671.6 gi|150399615|ref|YP_001323382.1| - 0.0022 18.1 0.0 0.0057 16.8 0.0 1.8 2 0 0 2 2 1 1 AAA domain ParA PF10609.9 gi|150399615|ref|YP_001323382.1| - 0.0035 16.8 0.1 0.0075 15.7 0.1 1.6 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase APS_kinase PF01583.20 gi|150399615|ref|YP_001323382.1| - 0.012 15.5 0.0 0.029 14.3 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_8 PF12780.7 gi|150399615|ref|YP_001323382.1| - 0.017 14.5 0.9 0.057 12.7 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region D4 T2SSE PF00437.20 gi|150399615|ref|YP_001323382.1| - 0.017 14.2 0.1 1.1 8.3 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_18 PF13238.6 gi|150399615|ref|YP_001323382.1| - 0.02 15.4 0.2 0.13 12.8 0.2 2.4 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|150399615|ref|YP_001323382.1| - 0.021 14.7 0.1 0.08 12.9 0.1 2.0 1 1 0 1 1 1 0 NACHT domain RNA_helicase PF00910.22 gi|150399615|ref|YP_001323382.1| - 0.029 14.8 0.3 0.24 11.8 0.3 2.4 1 1 0 1 1 1 0 RNA helicase AAA_19 PF13245.6 gi|150399615|ref|YP_001323382.1| - 0.029 14.7 0.6 0.072 13.4 0.1 1.9 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|150399615|ref|YP_001323382.1| - 0.036 14.0 1.7 0.92 9.4 0.0 2.5 2 0 0 2 2 2 0 NTPase SRPRB PF09439.10 gi|150399615|ref|YP_001323382.1| - 0.039 13.4 6.8 0.42 10.0 0.1 2.8 2 1 0 3 3 2 0 Signal recognition particle receptor beta subunit Thymidylate_kin PF02223.17 gi|150399615|ref|YP_001323382.1| - 0.039 13.6 0.6 0.16 11.7 0.1 2.3 2 0 0 2 2 2 0 Thymidylate kinase DUF2075 PF09848.9 gi|150399615|ref|YP_001323382.1| - 0.039 13.2 0.5 0.07 12.4 0.5 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_14 PF13173.6 gi|150399615|ref|YP_001323382.1| - 0.047 13.7 0.9 0.23 11.5 0.9 2.2 1 1 0 1 1 1 0 AAA domain LpxK PF02606.14 gi|150399615|ref|YP_001323382.1| - 0.049 12.7 0.1 0.23 10.5 0.0 1.8 1 1 1 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase KTI12 PF08433.10 gi|150399615|ref|YP_001323382.1| - 0.05 13.0 0.1 0.13 11.7 0.1 1.8 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_28 PF13521.6 gi|150399615|ref|YP_001323382.1| - 0.063 13.5 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|150399615|ref|YP_001323382.1| - 0.077 12.8 0.0 0.68 9.7 0.0 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_31 PF13614.6 gi|150399615|ref|YP_001323382.1| - 0.077 12.9 0.2 0.077 12.9 0.2 2.3 3 1 0 3 3 1 0 AAA domain MeaB PF03308.16 gi|150399615|ref|YP_001323382.1| - 0.11 11.5 3.1 0.17 10.9 0.0 2.6 3 1 1 4 4 4 0 Methylmalonyl Co-A mutase-associated GTPase MeaB S6PP PF05116.13 gi|150399615|ref|YP_001323382.1| - 0.11 12.0 0.4 0.46 10.0 0.1 2.0 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase AAA_25 PF13481.6 gi|150399615|ref|YP_001323382.1| - 0.12 11.9 0.4 1.3 8.5 0.2 2.2 1 1 1 2 2 2 0 AAA domain AAA_26 PF13500.6 gi|150399615|ref|YP_001323382.1| - 0.12 12.1 1.6 0.42 10.4 1.6 1.9 1 1 0 1 1 1 0 AAA domain TctA PF01970.16 gi|150399615|ref|YP_001323382.1| - 0.18 10.5 0.0 0.23 10.1 0.0 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family MMR_HSR1 PF01926.23 gi|150399615|ref|YP_001323382.1| - 0.18 11.9 6.5 0.07 13.2 2.3 2.4 2 1 0 2 2 1 0 50S ribosome-binding GTPase ResIII PF04851.15 gi|150399615|ref|YP_001323382.1| - 0.69 9.9 6.4 0.28 11.1 2.9 2.3 2 1 0 2 2 1 0 Type III restriction enzyme, res subunit AAA PF00004.29 gi|150399615|ref|YP_001323382.1| - 0.93 9.9 6.2 0.53 10.7 1.6 3.0 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) T3SS_basalb_I PF17001.5 gi|150399615|ref|YP_001323382.1| - 4.6 7.9 10.7 3.2 8.4 0.1 3.9 4 0 0 4 4 4 0 Type III secretion basal body protein I, YscI, HrpB, PscI Flavoprotein PF02441.19 gi|150399616|ref|YP_001323383.1| - 1.1e-27 96.7 0.0 1.5e-27 96.3 0.0 1.1 1 0 0 1 1 1 1 Flavoprotein Lge1 PF11488.8 gi|150399616|ref|YP_001323383.1| - 0.0076 16.4 0.2 0.012 15.8 0.2 1.2 1 0 0 1 1 1 1 Transcriptional regulatory protein LGE1 Radical_SAM PF04055.21 gi|150399617|ref|YP_001323384.1| - 3.6e-13 50.2 8.7 2.5e-11 44.3 6.7 3.0 2 1 0 2 2 2 1 Radical SAM superfamily MCR_beta PF02241.18 gi|150399618|ref|YP_001323385.1| - 7.4e-136 451.6 8.2 1e-135 451.1 8.2 1.2 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.15 gi|150399618|ref|YP_001323385.1| - 4.6e-81 270.8 2.1 8.8e-81 269.9 2.1 1.5 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain CAF1-p150_N PF15557.6 gi|150399618|ref|YP_001323385.1| - 0.023 14.7 0.0 1.6 8.6 0.0 2.2 2 0 0 2 2 2 0 CAF1 complex subunit p150, region binding to PCNA MCR_D PF02505.14 gi|150399619|ref|YP_001323386.1| - 1.3e-53 180.7 0.0 1.5e-53 180.5 0.0 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D MCR_C PF04609.12 gi|150399620|ref|YP_001323387.1| - 8.7e-09 34.8 0.3 1.4e-08 34.2 0.3 1.4 1 1 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C MCR_gamma PF02240.16 gi|150399621|ref|YP_001323388.1| - 2.6e-131 436.3 0.6 2.9e-131 436.1 0.6 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_alpha_N PF02745.15 gi|150399622|ref|YP_001323389.1| - 3.3e-143 475.9 0.0 4.3e-143 475.5 0.0 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.17 gi|150399622|ref|YP_001323389.1| - 2e-67 225.5 4.7 3.8e-67 224.5 4.7 1.5 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MtrE PF04206.12 gi|150399623|ref|YP_001323390.1| - 2.6e-127 423.7 13.5 3e-127 423.6 13.5 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E MtrD PF04207.12 gi|150399624|ref|YP_001323391.1| - 6.4e-94 313.7 26.6 8.1e-94 313.4 26.6 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D MtrC PF04211.13 gi|150399625|ref|YP_001323392.1| - 1.4e-97 326.0 27.5 1.6e-97 325.8 27.5 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C MFS_1 PF07690.16 gi|150399625|ref|YP_001323392.1| - 2.5 6.9 40.4 0.16 10.9 3.6 3.2 1 1 2 3 3 3 0 Major Facilitator Superfamily MtrB PF05440.12 gi|150399626|ref|YP_001323393.1| - 5.1e-35 119.8 0.0 6.1e-35 119.5 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrA PF04208.14 gi|150399627|ref|YP_001323394.1| - 1.6e-81 272.0 3.4 2.1e-81 271.6 3.4 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A GatB_Yqey PF02637.18 gi|150399627|ref|YP_001323394.1| - 0.029 14.3 0.1 0.072 13.0 0.1 1.6 1 1 0 1 1 1 0 GatB domain MtrA PF04208.14 gi|150399628|ref|YP_001323395.1| - 2.1e-81 271.6 3.7 2.9e-81 271.2 3.7 1.2 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.10 gi|150399628|ref|YP_001323395.1| - 2.5e-20 71.6 0.1 4.6e-20 70.8 0.1 1.4 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) GatB_Yqey PF02637.18 gi|150399628|ref|YP_001323395.1| - 0.035 14.0 0.1 0.077 12.9 0.1 1.5 1 1 0 1 1 1 0 GatB domain MtrG PF04210.13 gi|150399629|ref|YP_001323396.1| - 2.1e-28 97.9 0.4 2.4e-28 97.7 0.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G DUF2207 PF09972.9 gi|150399629|ref|YP_001323396.1| - 0.019 13.8 0.0 0.02 13.7 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MtrF PF09472.10 gi|150399629|ref|YP_001323396.1| - 0.019 14.3 0.4 0.036 13.5 0.4 1.4 1 1 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Osmo_CC PF08946.10 gi|150399629|ref|YP_001323396.1| - 0.077 13.3 0.2 0.1 12.8 0.2 1.1 1 0 0 1 1 1 0 Osmosensory transporter coiled coil MtrH PF02007.18 gi|150399630|ref|YP_001323397.1| - 1.1e-144 481.1 2.4 1.3e-144 480.9 2.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit Terminase_3C PF17288.2 gi|150399630|ref|YP_001323397.1| - 0.027 14.9 0.1 0.051 14.0 0.1 1.4 1 0 0 1 1 1 0 Terminase RNAseH like domain FBPase PF00316.20 gi|150399630|ref|YP_001323397.1| - 0.047 13.2 0.3 0.32 10.4 0.1 2.2 2 0 0 2 2 2 0 Fructose-1-6-bisphosphatase, N-terminal domain DUF2096 PF09869.9 gi|150399631|ref|YP_001323398.1| - 9e-53 178.8 0.7 1e-52 178.6 0.7 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2096) DUF749 PF05370.11 gi|150399632|ref|YP_001323399.1| - 2e-32 111.1 1.6 2.3e-32 110.9 1.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF749) Sod_Fe_N PF00081.22 gi|150399632|ref|YP_001323399.1| - 0.00026 21.4 0.2 0.00042 20.7 0.2 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain FliJ PF02050.16 gi|150399632|ref|YP_001323399.1| - 0.013 15.7 0.0 0.016 15.5 0.0 1.1 1 0 0 1 1 1 0 Flagellar FliJ protein YgaB PF14182.6 gi|150399632|ref|YP_001323399.1| - 0.023 15.1 0.1 0.046 14.1 0.1 1.5 1 0 0 1 1 1 0 YgaB-like protein CPSase_L_D3 PF02787.19 gi|150399632|ref|YP_001323399.1| - 0.032 14.6 0.2 0.13 12.6 0.1 1.8 1 1 1 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DUF104 PF01954.16 gi|150399632|ref|YP_001323399.1| - 0.12 12.8 0.8 5.7 7.5 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function DUF104 TatD_DNase PF01026.21 gi|150399633|ref|YP_001323400.1| - 6.2e-61 206.0 0.0 7.2e-61 205.8 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Gate PF07670.14 gi|150399634|ref|YP_001323401.1| - 1.7e-05 25.1 22.6 1.7e-05 25.0 0.9 2.7 3 1 0 3 3 3 2 Nucleoside recognition DUF5472 PF17566.2 gi|150399634|ref|YP_001323401.1| - 0.16 12.0 0.0 0.41 10.6 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5472) AAA_26 PF13500.6 gi|150399635|ref|YP_001323402.1| - 6.4e-50 169.7 0.3 7.8e-50 169.4 0.3 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|150399635|ref|YP_001323402.1| - 1.5e-05 25.1 1.7 0.00017 21.7 1.7 2.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF1611 PF07755.11 gi|150399635|ref|YP_001323402.1| - 0.00013 21.3 0.5 0.0016 17.7 0.2 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF1611_C) P-loop domain ParA PF10609.9 gi|150399635|ref|YP_001323402.1| - 0.0045 16.5 1.2 1.7 8.0 0.2 2.3 2 0 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase CTP_synth_N PF06418.14 gi|150399635|ref|YP_001323402.1| - 0.073 12.4 2.3 0.11 11.8 0.3 2.2 2 1 0 2 2 2 0 CTP synthase N-terminus Aminotran_1_2 PF00155.21 gi|150399636|ref|YP_001323403.1| - 3.7e-58 197.4 0.0 4.6e-58 197.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|150399636|ref|YP_001323403.1| - 2.2e-07 29.8 0.0 3.5e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|150399636|ref|YP_001323403.1| - 0.0029 16.6 0.1 0.0055 15.7 0.1 1.4 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|150399636|ref|YP_001323403.1| - 0.011 15.1 0.2 0.024 14.0 0.2 1.5 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 gi|150399636|ref|YP_001323403.1| - 0.02 13.6 0.5 0.25 10.0 0.5 2.1 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain SHMT PF00464.19 gi|150399636|ref|YP_001323403.1| - 0.052 12.1 0.5 0.16 10.6 0.5 1.6 1 1 0 1 1 1 0 Serine hydroxymethyltransferase BioW PF03744.13 gi|150399637|ref|YP_001323404.1| - 2e-74 250.2 0.5 2.2e-74 250.0 0.5 1.0 1 0 0 1 1 1 1 6-carboxyhexanoate--CoA ligase Radical_SAM_C PF16199.5 gi|150399639|ref|YP_001323406.1| - 2.2e-22 78.9 0.0 4.3e-22 77.9 0.0 1.5 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|150399639|ref|YP_001323406.1| - 7.6e-20 72.0 0.0 1.5e-19 71.0 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|150399639|ref|YP_001323406.1| - 7e-09 35.9 0.0 6.8e-08 32.8 0.0 2.2 1 1 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|150399639|ref|YP_001323406.1| - 1.7e-07 31.2 0.0 3.3e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|150399639|ref|YP_001323406.1| - 0.00058 20.2 0.0 0.0012 19.2 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF2717 PF10911.8 gi|150399639|ref|YP_001323406.1| - 0.067 12.9 0.0 0.15 11.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2717) CTP_transf_like PF01467.26 gi|150399640|ref|YP_001323407.1| - 6.7e-16 58.8 0.0 4.1e-15 56.2 0.0 1.9 1 1 0 1 1 1 1 Cytidylyltransferase-like HIGH_NTase1 PF05636.11 gi|150399640|ref|YP_001323407.1| - 0.00061 19.1 0.0 0.1 11.8 0.0 2.0 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase ATP-sulfurylase PF01747.17 gi|150399640|ref|YP_001323407.1| - 0.0021 17.5 0.0 0.17 11.3 0.0 2.1 2 0 0 2 2 2 2 ATP-sulfurylase Ribosomal_S13_N PF08069.12 gi|150399641|ref|YP_001323408.1| - 1.2e-24 86.1 0.4 2.5e-24 85.1 0.4 1.6 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|150399641|ref|YP_001323408.1| - 3.1e-16 59.4 0.0 4.3e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 DUF4346 PF14251.6 gi|150399642|ref|YP_001323409.1| - 3.7e-09 36.6 0.4 1.8e-07 31.2 0.4 2.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4346) Pterin_bind PF00809.22 gi|150399642|ref|YP_001323409.1| - 1.8e-08 34.4 0.2 3.2e-08 33.6 0.2 1.4 1 0 0 1 1 1 1 Pterin binding enzyme DUF4830 PF16112.5 gi|150399642|ref|YP_001323409.1| - 0.03 14.8 1.4 0.1 13.1 0.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4830) LMWPc PF01451.21 gi|150399642|ref|YP_001323409.1| - 0.044 14.2 0.2 0.14 12.5 0.2 1.9 1 0 0 1 1 1 0 Low molecular weight phosphotyrosine protein phosphatase QRPTase_C PF01729.19 gi|150399642|ref|YP_001323409.1| - 0.096 12.5 0.7 0.35 10.6 0.6 2.1 1 1 1 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain AAA_11 PF13086.6 gi|150399643|ref|YP_001323410.1| - 6.8e-57 193.2 0.1 1.2e-56 192.4 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_12 PF13087.6 gi|150399643|ref|YP_001323410.1| - 3.9e-52 176.8 3.8 7.6e-52 175.8 3.8 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|150399643|ref|YP_001323410.1| - 6.1e-08 32.6 0.0 1.7e-06 27.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 gi|150399643|ref|YP_001323410.1| - 6.5e-08 32.6 0.0 0.0037 17.0 0.0 3.2 2 1 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 gi|150399643|ref|YP_001323410.1| - 1.1e-05 25.9 0.0 7.4e-05 23.1 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|150399643|ref|YP_001323410.1| - 0.001 19.5 0.0 0.0021 18.4 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|150399643|ref|YP_001323410.1| - 0.0017 18.8 0.5 0.035 14.5 0.0 3.0 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) UvrD_C_2 PF13538.6 gi|150399643|ref|YP_001323410.1| - 0.0021 17.8 0.0 0.0036 17.1 0.0 1.3 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain KaiA PF07688.12 gi|150399643|ref|YP_001323410.1| - 0.0041 17.2 4.6 0.027 14.6 1.8 3.0 2 0 0 2 2 2 1 KaiA C-terminal domain ResIII PF04851.15 gi|150399643|ref|YP_001323410.1| - 0.0052 16.8 5.0 0.0063 16.5 0.5 2.9 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|150399643|ref|YP_001323410.1| - 0.0057 16.9 0.0 0.019 15.2 0.0 2.0 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.12 gi|150399643|ref|YP_001323410.1| - 0.011 15.5 0.1 0.045 13.5 0.0 2.1 2 1 0 2 2 1 0 Holliday junction DNA helicase RuvB P-loop domain T2SSE PF00437.20 gi|150399643|ref|YP_001323410.1| - 0.023 13.7 0.0 0.054 12.5 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_18 PF13238.6 gi|150399643|ref|YP_001323410.1| - 0.051 14.1 0.3 0.44 11.1 0.1 2.8 2 1 0 2 2 1 0 AAA domain PhoH PF02562.16 gi|150399643|ref|YP_001323410.1| - 0.054 12.9 0.2 0.39 10.1 0.0 2.4 3 0 0 3 3 3 0 PhoH-like protein SPAN-X PF07458.12 gi|150399643|ref|YP_001323410.1| - 0.054 13.9 0.4 9.2 6.8 0.0 3.3 3 0 0 3 3 3 0 Sperm protein associated with nucleus, mapped to X chromosome DEAD PF00270.29 gi|150399643|ref|YP_001323410.1| - 0.059 13.1 0.1 0.24 11.1 0.0 2.2 2 1 0 2 2 2 0 DEAD/DEAH box helicase DUF2075 PF09848.9 gi|150399643|ref|YP_001323410.1| - 0.089 12.0 0.1 0.75 9.0 0.0 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Zot PF05707.12 gi|150399643|ref|YP_001323410.1| - 0.096 12.3 0.1 0.3 10.7 0.1 2.0 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) DUF5109 PF17134.4 gi|150399643|ref|YP_001323410.1| - 0.12 12.3 2.2 0.29 11.0 0.2 2.6 3 0 0 3 3 2 0 Domain of unknown function (DUF5109) UvrD-helicase PF00580.21 gi|150399643|ref|YP_001323410.1| - 0.86 9.1 6.7 3.9 6.9 6.7 2.2 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain PvlArgDC PF01862.16 gi|150399644|ref|YP_001323411.1| - 6.7e-44 149.5 0.0 7.6e-44 149.4 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) AdoMet_dc PF02675.15 gi|150399645|ref|YP_001323412.1| - 5.8e-37 126.2 0.0 6.6e-37 126.0 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase Spermine_synth PF01564.17 gi|150399646|ref|YP_001323413.1| - 1e-66 223.9 0.0 1.4e-66 223.5 0.0 1.1 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Spermine_synt_N PF17284.2 gi|150399646|ref|YP_001323413.1| - 2.8e-16 59.2 0.6 5.5e-16 58.2 0.6 1.5 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain Methyltransf_PK PF05891.12 gi|150399646|ref|YP_001323413.1| - 0.024 14.2 0.0 0.033 13.7 0.0 1.3 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase MTS PF05175.14 gi|150399646|ref|YP_001323413.1| - 0.05 13.2 0.0 0.078 12.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain AAA_31 PF13614.6 gi|150399646|ref|YP_001323413.1| - 0.097 12.6 0.2 0.21 11.5 0.2 1.6 1 1 0 1 1 1 0 AAA domain Methyltransf_30 PF05430.11 gi|150399646|ref|YP_001323413.1| - 0.1 12.5 0.0 0.26 11.2 0.0 1.7 1 1 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase DRE2_N PF16803.5 gi|150399646|ref|YP_001323413.1| - 0.96 9.7 3.2 3.4 7.9 0.0 2.9 4 0 0 4 4 4 0 Fe-S cluster assembly protein DRE2 N-terminus Arginase PF00491.21 gi|150399647|ref|YP_001323414.1| - 2.5e-74 250.3 0.0 2.9e-74 250.1 0.0 1.0 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.7 gi|150399647|ref|YP_001323414.1| - 0.037 14.2 0.0 0.059 13.6 0.0 1.3 1 0 0 1 1 1 0 UPF0489 domain Cytochrom_B562 PF07361.11 gi|150399648|ref|YP_001323415.1| - 0.028 15.1 0.2 0.034 14.8 0.2 1.1 1 0 0 1 1 1 0 Cytochrome b562 EamA PF00892.20 gi|150399649|ref|YP_001323416.1| - 2.3e-16 60.2 13.8 2.6e-16 60.0 13.8 1.0 1 0 0 1 1 1 1 EamA-like transporter family TMEM234 PF10639.9 gi|150399649|ref|YP_001323416.1| - 0.00015 21.8 1.9 0.00015 21.8 1.9 1.8 1 1 1 2 2 2 1 Putative transmembrane family 234 TPT PF03151.16 gi|150399649|ref|YP_001323416.1| - 0.001 18.5 5.1 0.0011 18.4 5.1 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family Multi_Drug_Res PF00893.19 gi|150399649|ref|YP_001323416.1| - 0.0036 17.9 8.6 0.073 13.7 8.7 2.1 1 1 1 2 2 2 1 Small Multidrug Resistance protein UAA PF08449.11 gi|150399649|ref|YP_001323416.1| - 0.018 14.2 6.5 0.03 13.5 6.4 1.4 1 1 0 1 1 1 0 UAA transporter family DUF4134 PF13572.6 gi|150399649|ref|YP_001323416.1| - 0.035 14.4 1.6 0.035 14.4 1.6 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4134) DUF3638 PF12340.8 gi|150399649|ref|YP_001323416.1| - 0.056 12.8 0.1 0.07 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3638) MENTAL PF10457.9 gi|150399649|ref|YP_001323416.1| - 0.087 12.6 1.6 0.13 12.1 1.6 1.3 1 1 0 1 1 1 0 Cholesterol-capturing domain ABC2_membrane_5 PF13346.6 gi|150399649|ref|YP_001323416.1| - 0.14 11.7 13.3 0.18 11.3 13.3 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein MerC PF03203.14 gi|150399649|ref|YP_001323416.1| - 0.17 12.3 6.3 0.34 11.4 5.8 1.6 1 1 1 2 2 2 0 MerC mercury resistance protein DUF202 PF02656.15 gi|150399649|ref|YP_001323416.1| - 0.25 11.8 10.1 1.8 9.0 2.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF202) DUF5090 PF17009.5 gi|150399649|ref|YP_001323416.1| - 0.29 11.1 7.2 0.35 10.8 7.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) NMN_transporter PF04973.12 gi|150399649|ref|YP_001323416.1| - 0.89 9.5 9.9 0.51 10.3 4.5 2.2 1 1 0 2 2 2 0 Nicotinamide mononucleotide transporter DUF2070 PF09843.9 gi|150399649|ref|YP_001323416.1| - 2.1 6.5 9.5 2.1 6.5 9.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4191 PF13829.6 gi|150399649|ref|YP_001323416.1| - 9.5 5.5 6.2 1.8 7.9 2.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) 2-Hacid_dh_C PF02826.19 gi|150399650|ref|YP_001323417.1| - 6.3e-63 211.3 0.0 2.2e-62 209.6 0.0 1.9 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|150399650|ref|YP_001323417.1| - 1.1e-42 144.9 1.7 1.5e-42 144.4 0.8 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 gi|150399650|ref|YP_001323417.1| - 2.5e-12 46.4 0.9 1.4e-11 43.9 0.0 2.4 2 0 0 2 2 2 1 ACT domain NAD_binding_2 PF03446.15 gi|150399650|ref|YP_001323417.1| - 1.1e-05 25.7 0.7 2.1e-05 24.7 0.1 1.9 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|150399650|ref|YP_001323417.1| - 0.00072 19.2 0.3 0.2 11.2 0.0 2.7 2 1 0 2 2 2 2 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACT_4 PF13291.6 gi|150399650|ref|YP_001323417.1| - 0.0028 18.2 0.1 0.037 14.6 0.0 2.7 2 1 0 2 2 2 1 ACT domain UDPG_MGDP_dh_C PF03720.15 gi|150399650|ref|YP_001323417.1| - 0.049 14.0 0.3 2.6 8.5 0.0 2.6 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.17 gi|150399650|ref|YP_001323417.1| - 0.065 13.8 0.0 0.065 13.8 0.0 2.9 3 1 1 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent Paramyxo_P_V_N PF13825.6 gi|150399650|ref|YP_001323417.1| - 0.076 12.4 1.3 0.16 11.4 0.7 1.7 1 1 0 2 2 2 0 Paramyxovirus structural protein V/P N-terminus CPSase_sm_chain PF00988.22 gi|150399651|ref|YP_001323418.1| - 2e-43 147.3 0.1 4.2e-43 146.2 0.1 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|150399651|ref|YP_001323418.1| - 6.4e-40 137.0 0.0 8.8e-40 136.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|150399651|ref|YP_001323418.1| - 6.3e-07 29.4 1.4 0.00016 21.5 1.4 2.3 1 1 0 1 1 1 1 Peptidase C26 PhosphMutase PF10143.9 gi|150399651|ref|YP_001323418.1| - 0.088 12.7 0.1 0.18 11.7 0.1 1.5 1 1 0 1 1 1 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase QueC PF06508.13 gi|150399652|ref|YP_001323419.1| - 0.00041 19.9 0.3 0.011 15.3 0.3 2.4 1 1 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|150399652|ref|YP_001323419.1| - 0.0039 16.3 0.2 0.016 14.3 0.1 1.9 1 1 1 2 2 2 1 NAD synthase ATP_bind_3 PF01171.20 gi|150399652|ref|YP_001323419.1| - 0.023 14.5 2.3 0.11 12.2 0.3 2.5 2 1 0 2 2 2 0 PP-loop family DPPIV_rep PF18811.1 gi|150399652|ref|YP_001323419.1| - 0.026 14.5 0.0 0.068 13.1 0.0 1.8 1 0 0 1 1 1 0 Dipeptidyl peptidase IV (DPP IV) low complexity region EF-hand_10 PF14788.6 gi|150399652|ref|YP_001323419.1| - 0.041 13.7 0.0 0.086 12.7 0.0 1.6 1 0 0 1 1 1 0 EF hand CbiG_C PF01890.16 gi|150399653|ref|YP_001323420.1| - 6.4e-23 81.5 0.0 9.9e-23 80.9 0.0 1.3 1 0 0 1 1 1 1 Cobalamin synthesis G C-terminus CbiG_N PF11760.8 gi|150399653|ref|YP_001323420.1| - 4.6e-17 61.8 0.0 1.3e-16 60.4 0.0 1.7 2 0 0 2 2 2 1 Cobalamin synthesis G N-terminal tRNA-synt_1b PF00579.25 gi|150399654|ref|YP_001323421.1| - 2.7e-53 181.2 0.0 3.5e-53 180.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Flavodoxin_NdrI PF07972.11 gi|150399654|ref|YP_001323421.1| - 0.08 13.1 0.0 4.4 7.5 0.0 2.5 2 0 0 2 2 2 0 NrdI Flavodoxin like DUF1743 PF08489.11 gi|150399655|ref|YP_001323422.1| - 4.9e-10 39.5 2.0 2.8e-07 30.6 0.3 3.4 2 1 0 2 2 2 1 Domain of unknown function (DUF1743) 7TM_GPCR_Srt PF10321.9 gi|150399655|ref|YP_001323422.1| - 0.12 11.3 0.2 0.17 10.9 0.2 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt Cobl PF09469.10 gi|150399655|ref|YP_001323422.1| - 0.13 12.6 0.0 0.32 11.3 0.0 1.7 1 0 0 1 1 1 0 Cordon-bleu ubiquitin-like domain CENP-F_leu_zip PF10473.9 gi|150399656|ref|YP_001323423.1| - 0.0036 17.3 3.6 0.018 15.1 1.0 2.6 1 1 2 3 3 3 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Snapin_Pallidin PF14712.6 gi|150399656|ref|YP_001323423.1| - 0.069 13.6 2.8 0.23 11.9 1.2 2.4 2 1 0 2 2 2 0 Snapin/Pallidin Ribosomal_L29 PF00831.23 gi|150399656|ref|YP_001323423.1| - 0.81 9.7 0.1 0.81 9.7 0.1 3.4 3 1 1 4 4 4 0 Ribosomal L29 protein DUF5591 PF17884.1 gi|150399657|ref|YP_001323424.1| - 2.8e-46 157.2 2.7 4.6e-46 156.5 1.2 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF5591) PUA PF01472.20 gi|150399657|ref|YP_001323424.1| - 3.2e-15 55.8 0.2 8.4e-15 54.5 0.2 1.7 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.6 gi|150399657|ref|YP_001323424.1| - 0.00079 19.5 0.0 0.0024 18.0 0.0 1.8 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase TGT PF01702.18 gi|150399657|ref|YP_001323424.1| - 0.05 12.7 0.0 0.095 11.8 0.0 1.4 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase SpoIIM PF01944.17 gi|150399658|ref|YP_001323425.1| - 8.1e-17 61.7 20.0 1e-16 61.4 20.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein M PgpA PF04608.13 gi|150399659|ref|YP_001323426.1| - 3.2e-17 62.9 0.0 3.7e-17 62.7 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A Longin PF13774.6 gi|150399659|ref|YP_001323426.1| - 0.12 12.4 0.0 8.1 6.6 0.0 2.3 2 0 0 2 2 2 0 Regulated-SNARE-like domain DUF483 PF04467.12 gi|150399660|ref|YP_001323427.1| - 2.6e-54 182.4 0.5 4.4e-54 181.7 0.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF483) UBA_3 PF09288.10 gi|150399660|ref|YP_001323427.1| - 0.013 15.3 0.0 0.037 13.8 0.0 1.8 1 0 0 1 1 1 0 Fungal ubiquitin-associated domain TrkA_N PF02254.18 gi|150399661|ref|YP_001323428.1| - 3.2e-30 104.7 0.7 3.2e-30 104.7 0.7 1.7 2 0 0 2 2 1 1 TrkA-N domain TrkA_C PF02080.21 gi|150399661|ref|YP_001323428.1| - 1.8e-14 53.3 0.1 4.5e-14 52.0 0.1 1.7 1 0 0 1 1 1 1 TrkA-C domain NAD_binding_7 PF13241.6 gi|150399661|ref|YP_001323428.1| - 0.0001 22.7 0.9 0.0017 18.8 0.1 2.4 2 1 0 2 2 2 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|150399661|ref|YP_001323428.1| - 0.00093 18.8 1.6 0.0068 16.0 0.1 2.7 2 1 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F420_oxidored PF03807.17 gi|150399661|ref|YP_001323428.1| - 0.0016 19.0 2.1 0.018 15.6 0.7 2.8 2 2 1 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 gi|150399661|ref|YP_001323428.1| - 0.0024 17.9 0.4 0.0053 16.8 0.4 1.6 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ApbA PF02558.16 gi|150399661|ref|YP_001323428.1| - 0.0041 16.8 0.3 0.038 13.6 0.1 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 gi|150399661|ref|YP_001323428.1| - 0.0043 17.3 0.0 0.0085 16.3 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_10 PF13460.6 gi|150399661|ref|YP_001323428.1| - 0.0051 16.7 0.0 0.0082 16.0 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|150399661|ref|YP_001323428.1| - 0.0054 16.2 0.1 0.01 15.3 0.1 1.4 1 1 0 1 1 1 1 short chain dehydrogenase LpxI_N PF17930.1 gi|150399661|ref|YP_001323428.1| - 0.025 14.5 0.0 0.061 13.2 0.0 1.7 1 0 0 1 1 1 0 LpxI N-terminal domain Shikimate_DH PF01488.20 gi|150399661|ref|YP_001323428.1| - 0.035 14.2 0.7 0.23 11.5 0.3 2.1 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|150399661|ref|YP_001323428.1| - 0.045 13.7 0.1 0.12 12.4 0.0 1.8 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 gi|150399661|ref|YP_001323428.1| - 0.047 13.6 0.8 0.091 12.6 0.1 1.8 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 gi|150399661|ref|YP_001323428.1| - 0.072 12.3 0.0 0.08 12.2 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain adh_short_C2 PF13561.6 gi|150399661|ref|YP_001323428.1| - 0.073 12.6 0.1 0.091 12.3 0.1 1.2 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase AlaDh_PNT_C PF01262.21 gi|150399661|ref|YP_001323428.1| - 0.076 12.3 1.0 0.41 9.9 1.0 2.0 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Epimerase PF01370.21 gi|150399661|ref|YP_001323428.1| - 0.12 11.9 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family KR PF08659.10 gi|150399661|ref|YP_001323428.1| - 0.13 12.1 0.2 0.41 10.5 0.2 1.8 2 1 0 2 2 2 0 KR domain RimK PF08443.11 gi|150399662|ref|YP_001323429.1| - 1.4e-26 93.3 0.4 1.9e-26 92.9 0.4 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|150399662|ref|YP_001323429.1| - 4.8e-16 58.7 0.2 6.8e-16 58.2 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 gi|150399662|ref|YP_001323429.1| - 2.7e-11 43.8 1.2 6.6e-11 42.5 1.2 1.6 1 1 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|150399662|ref|YP_001323429.1| - 5.9e-10 39.0 0.3 2e-09 37.3 0.3 1.8 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus Synapsin_C PF02750.14 gi|150399662|ref|YP_001323429.1| - 3.8e-06 26.5 0.7 5.1e-06 26.1 0.7 1.2 1 0 0 1 1 1 1 Synapsin, ATP binding domain ATPgrasp_ST PF14397.6 gi|150399662|ref|YP_001323429.1| - 1.3e-05 24.6 0.8 0.061 12.6 0.0 3.1 1 1 2 3 3 3 2 Sugar-transfer associated ATP-grasp ATP-grasp_4 PF13535.6 gi|150399662|ref|YP_001323429.1| - 3.1e-05 23.6 0.0 7.7e-05 22.3 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 gi|150399662|ref|YP_001323429.1| - 8.1e-05 22.3 0.1 0.00012 21.7 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|150399662|ref|YP_001323429.1| - 0.00066 19.0 0.4 0.074 12.3 0.1 2.3 2 0 0 2 2 2 2 YheC/D like ATP-grasp CPSase_L_D2 PF02786.17 gi|150399662|ref|YP_001323429.1| - 0.0011 18.5 0.0 0.0026 17.3 0.0 1.6 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain DUF1981 PF09324.10 gi|150399662|ref|YP_001323429.1| - 0.2 11.5 2.3 4.4 7.2 0.1 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF1981) PrmA PF06325.13 gi|150399663|ref|YP_001323430.1| - 6.9e-19 68.3 0.3 9.2e-19 67.9 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.16 gi|150399663|ref|YP_001323430.1| - 2.3e-13 50.4 0.1 4.4e-13 49.4 0.1 1.4 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_25 PF13649.6 gi|150399663|ref|YP_001323430.1| - 2.3e-08 34.6 0.0 4.1e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|150399663|ref|YP_001323430.1| - 3.2e-08 33.5 0.0 5e-08 32.9 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|150399663|ref|YP_001323430.1| - 7.2e-08 32.2 0.0 1.2e-07 31.4 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|150399663|ref|YP_001323430.1| - 2.3e-07 31.4 0.0 4.2e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|150399663|ref|YP_001323430.1| - 2.8e-06 27.2 0.1 5.4e-06 26.3 0.1 1.5 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 gi|150399663|ref|YP_001323430.1| - 1.6e-05 24.2 0.1 2.1e-05 23.7 0.1 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PRMT5 PF05185.16 gi|150399663|ref|YP_001323430.1| - 5.3e-05 23.1 0.0 0.00015 21.7 0.0 1.7 2 0 0 2 2 2 1 PRMT5 arginine-N-methyltransferase Methyltransf_18 PF12847.7 gi|150399663|ref|YP_001323430.1| - 0.00012 22.1 0.1 0.00017 21.6 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|150399663|ref|YP_001323430.1| - 0.00071 19.4 0.0 0.00083 19.2 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|150399663|ref|YP_001323430.1| - 0.0018 17.9 0.0 0.0031 17.2 0.0 1.4 1 1 0 1 1 1 1 Conserved hypothetical protein 95 N6_N4_Mtase PF01555.18 gi|150399663|ref|YP_001323430.1| - 0.0034 17.1 0.6 0.0057 16.4 0.1 1.6 2 0 0 2 2 2 1 DNA methylase Methyltransf_4 PF02390.17 gi|150399663|ref|YP_001323430.1| - 0.0057 16.1 0.0 0.012 15.1 0.0 1.5 2 0 0 2 2 2 1 Putative methyltransferase tRNA_U5-meth_tr PF05958.11 gi|150399663|ref|YP_001323430.1| - 0.016 14.2 0.0 0.024 13.6 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase CMAS PF02353.20 gi|150399663|ref|YP_001323430.1| - 0.017 14.4 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltr_RsmB-F PF01189.17 gi|150399663|ref|YP_001323430.1| - 0.019 14.6 0.0 0.031 13.9 0.0 1.6 1 1 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_16 PF10294.9 gi|150399663|ref|YP_001323430.1| - 0.028 14.2 0.0 0.047 13.4 0.0 1.5 1 0 0 1 1 1 0 Lysine methyltransferase Ubie_methyltran PF01209.18 gi|150399663|ref|YP_001323430.1| - 0.028 13.7 0.1 0.048 13.0 0.1 1.3 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family FtsJ PF01728.19 gi|150399663|ref|YP_001323430.1| - 0.033 14.3 0.0 0.052 13.7 0.0 1.4 1 1 0 1 1 1 0 FtsJ-like methyltransferase AAA_31 PF13614.6 gi|150399663|ref|YP_001323430.1| - 0.033 14.1 1.1 0.077 12.9 1.1 1.5 1 1 0 1 1 1 0 AAA domain Methyltransf_12 PF08242.12 gi|150399663|ref|YP_001323430.1| - 0.043 14.6 0.0 0.078 13.7 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.6 gi|150399663|ref|YP_001323430.1| - 0.093 12.7 0.2 0.27 11.2 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain HcyBio PF01837.16 gi|150399664|ref|YP_001323431.1| - 9e-82 274.7 0.1 1e-81 274.5 0.1 1.0 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation Fer4_7 PF12838.7 gi|150399664|ref|YP_001323431.1| - 4.1e-07 30.5 4.8 0.01 16.4 1.0 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399664|ref|YP_001323431.1| - 2.1e-05 24.6 9.7 5.1e-05 23.4 9.7 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399664|ref|YP_001323431.1| - 9.7e-05 22.6 15.4 0.0055 17.1 3.6 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399664|ref|YP_001323431.1| - 0.00035 21.0 3.8 0.2 12.1 1.0 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399664|ref|YP_001323431.1| - 0.0013 18.8 7.5 0.0032 17.6 7.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399664|ref|YP_001323431.1| - 0.0017 18.5 2.9 0.0034 17.6 2.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399664|ref|YP_001323431.1| - 0.0096 15.7 16.4 0.046 13.6 2.8 3.5 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399664|ref|YP_001323431.1| - 0.033 14.3 13.4 0.13 12.3 13.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399664|ref|YP_001323431.1| - 0.16 12.1 14.6 0.68 10.1 3.3 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_11 PF13247.6 gi|150399664|ref|YP_001323431.1| - 0.16 12.1 4.6 0.34 11.0 4.6 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399664|ref|YP_001323431.1| - 0.29 11.3 14.9 0.49 10.6 4.0 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|150399664|ref|YP_001323431.1| - 0.44 11.5 14.5 0.88 10.5 1.2 3.0 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|150399664|ref|YP_001323431.1| - 0.7 10.5 13.3 1.9 9.1 2.5 2.7 1 1 2 3 3 3 0 4Fe-4S dicluster domain DUF4013 PF13197.6 gi|150399665|ref|YP_001323432.1| - 1.3e-22 80.4 20.7 1.3e-22 80.4 20.7 3.0 1 1 2 3 3 3 2 Protein of unknown function (DUF4013) Yip1 PF04893.17 gi|150399665|ref|YP_001323432.1| - 2.3 7.9 40.2 0.35 10.6 20.1 2.5 1 1 1 2 2 2 0 Yip1 domain PK PF00224.21 gi|150399666|ref|YP_001323433.1| - 1.9e-80 270.4 8.2 3.8e-79 266.1 8.2 2.2 1 1 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|150399666|ref|YP_001323433.1| - 3.3e-18 66.0 0.0 1.1e-17 64.4 0.0 1.9 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 gi|150399666|ref|YP_001323433.1| - 6.1e-06 25.5 0.1 1.2e-05 24.5 0.1 1.6 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family DFP PF04127.15 gi|150399667|ref|YP_001323434.1| - 9.9e-46 155.9 0.0 4e-45 153.9 0.0 1.9 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|150399667|ref|YP_001323434.1| - 2.6e-28 98.8 4.5 2.6e-28 98.8 4.5 2.0 2 1 0 2 2 2 1 Flavoprotein BRCT PF00533.26 gi|150399667|ref|YP_001323434.1| - 0.14 12.5 1.1 1.8 9.0 0.0 3.0 3 0 0 3 3 3 0 BRCA1 C Terminus (BRCT) domain DASH_Dad4 PF08650.10 gi|150399667|ref|YP_001323434.1| - 0.75 9.8 3.8 3.9 7.5 0.1 2.9 2 0 0 2 2 2 0 DASH complex subunit Dad4 FTR_C PF02741.15 gi|150399668|ref|YP_001323435.1| - 4.8e-65 218.1 4.2 8.5e-65 217.3 4.2 1.4 1 0 0 1 1 1 1 FTR, proximal lobe FTR PF01913.18 gi|150399668|ref|YP_001323435.1| - 1.5e-60 203.3 0.1 3.2e-60 202.2 0.1 1.6 1 0 0 1 1 1 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase PAC2 PF09754.9 gi|150399670|ref|YP_001323437.1| - 6.5e-47 160.3 0.0 7.4e-47 160.1 0.0 1.0 1 0 0 1 1 1 1 PAC2 family CTP_transf_3 PF02348.19 gi|150399670|ref|YP_001323437.1| - 0.17 11.7 0.0 0.62 9.9 0.0 1.8 2 1 0 2 2 2 0 Cytidylyltransferase RIO1 PF01163.22 gi|150399671|ref|YP_001323438.1| - 1.2e-06 28.3 0.2 1.6e-06 27.9 0.2 1.3 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|150399671|ref|YP_001323438.1| - 7.1e-05 22.3 1.2 0.00011 21.7 1.2 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|150399671|ref|YP_001323438.1| - 0.00061 19.1 0.1 0.00081 18.7 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Choline_kinase PF01633.20 gi|150399671|ref|YP_001323438.1| - 0.0067 16.0 0.0 0.01 15.5 0.0 1.3 1 0 0 1 1 1 1 Choline/ethanolamine kinase Kdo PF06293.14 gi|150399671|ref|YP_001323438.1| - 0.099 12.0 0.3 0.17 11.2 0.1 1.5 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Alba PF01918.21 gi|150399672|ref|YP_001323439.1| - 1.6e-17 63.1 1.0 2.3e-17 62.6 1.0 1.3 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 gi|150399672|ref|YP_001323439.1| - 0.023 14.6 0.2 0.044 13.7 0.1 1.4 1 1 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P tRNA-synt_His PF13393.6 gi|150399673|ref|YP_001323440.1| - 4.6e-67 226.5 0.0 5.7e-67 226.2 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|150399673|ref|YP_001323440.1| - 1.5e-12 47.5 0.0 4e-12 46.1 0.0 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|150399673|ref|YP_001323440.1| - 2.1e-11 44.1 0.0 4.3e-11 43.1 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 gi|150399673|ref|YP_001323440.1| - 3.8e-08 32.8 1.8 1.1e-05 24.7 1.2 2.7 2 1 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 gi|150399673|ref|YP_001323440.1| - 4.9e-07 29.5 0.0 9.3e-07 28.6 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) YqzH PF14164.6 gi|150399673|ref|YP_001323440.1| - 0.005 16.9 2.4 0.24 11.5 0.2 3.4 3 0 0 3 3 3 1 YqzH-like protein CdiA_C PF18451.1 gi|150399673|ref|YP_001323440.1| - 0.19 11.9 8.3 0.89 9.8 0.2 4.1 2 2 1 4 4 4 0 Contact-dependent growth inhibition CdiA C-terminal domain DUF4927 PF16279.5 gi|150399673|ref|YP_001323440.1| - 0.38 11.8 4.1 0.72 10.9 4.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4927) FeS_assembly_P PF01883.19 gi|150399674|ref|YP_001323441.1| - 7.4e-21 74.1 0.2 9.1e-21 73.8 0.2 1.1 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein tRNA-synt_2 PF00152.20 gi|150399675|ref|YP_001323442.1| - 2.5e-92 309.3 0.7 3e-92 309.0 0.7 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|150399675|ref|YP_001323442.1| - 3e-15 55.9 0.1 6.9e-15 54.8 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|150399675|ref|YP_001323442.1| - 0.00015 21.3 0.4 0.05 13.1 0.0 3.0 3 0 0 3 3 3 2 tRNA synthetases class II core domain (F) IF-2B PF01008.17 gi|150399676|ref|YP_001323443.1| - 4.9e-77 258.9 0.1 6.3e-77 258.6 0.1 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family MoeA_N PF03453.17 gi|150399677|ref|YP_001323444.1| - 2.8e-38 131.2 0.0 3.7e-38 130.7 0.0 1.2 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|150399677|ref|YP_001323444.1| - 2.3e-27 95.4 0.0 4.5e-27 94.5 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|150399677|ref|YP_001323444.1| - 1.5e-14 53.9 0.0 4.9e-14 52.2 0.0 2.0 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) 7TMR-HDED PF07697.11 gi|150399677|ref|YP_001323444.1| - 0.0068 16.5 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 7TM-HD extracellular NADHdh PF00146.21 gi|150399679|ref|YP_001323446.1| - 8.9e-18 64.6 18.5 1.4e-16 60.7 18.5 2.0 1 1 0 1 1 1 1 NADH dehydrogenase Oxidored_q6 PF01058.22 gi|150399680|ref|YP_001323447.1| - 2.3e-27 95.4 1.2 2.8e-27 95.1 1.2 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1490 PF07371.12 gi|150399680|ref|YP_001323447.1| - 0.17 12.0 0.0 0.32 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) Fer4 PF00037.27 gi|150399681|ref|YP_001323448.1| - 1.5e-10 40.4 12.8 2.5e-06 27.0 3.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399681|ref|YP_001323448.1| - 6.7e-09 36.2 8.7 1.1e-08 35.5 8.7 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399681|ref|YP_001323448.1| - 9e-09 35.3 7.1 1.5e-08 34.6 7.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399681|ref|YP_001323448.1| - 9.5e-09 35.3 4.8 0.00019 21.5 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399681|ref|YP_001323448.1| - 2.6e-08 34.2 1.9 0.0017 18.7 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399681|ref|YP_001323448.1| - 1.3e-07 31.6 6.7 2.2e-07 30.9 6.7 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399681|ref|YP_001323448.1| - 4e-07 30.5 0.7 0.0059 17.1 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399681|ref|YP_001323448.1| - 7.3e-07 29.0 12.4 8.3e-05 22.5 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|150399681|ref|YP_001323448.1| - 8.8e-06 26.6 10.5 3.5e-05 24.7 10.7 1.8 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|150399681|ref|YP_001323448.1| - 0.00012 22.0 13.4 0.034 14.2 3.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399681|ref|YP_001323448.1| - 0.0014 19.0 11.5 0.032 14.7 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain JAMP PF05571.12 gi|150399681|ref|YP_001323448.1| - 0.016 14.9 1.0 0.019 14.6 1.0 1.1 1 0 0 1 1 1 0 JNK1/MAPK8-associated membrane protein Fer4_13 PF13370.6 gi|150399681|ref|YP_001323448.1| - 0.032 14.8 8.2 0.64 10.6 1.5 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|150399681|ref|YP_001323448.1| - 0.051 13.8 4.6 0.71 10.1 0.3 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150399681|ref|YP_001323448.1| - 0.056 14.3 8.7 1.4 9.8 2.5 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150399681|ref|YP_001323448.1| - 2.4 9.0 12.0 2.2 9.1 1.1 2.7 2 2 1 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|150399681|ref|YP_001323448.1| - 7.4 7.8 18.1 0.36 11.9 6.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|150399682|ref|YP_001323449.1| - 7.4e-69 225.0 151.4 2.1e-07 30.4 4.4 14.6 15 0 0 15 15 15 14 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399682|ref|YP_001323449.1| - 2.1e-51 172.3 120.0 1.9e-08 34.8 8.2 10.8 5 3 6 11 11 11 11 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399682|ref|YP_001323449.1| - 2.4e-43 146.1 126.8 4.4e-08 33.2 11.9 10.7 6 3 4 10 10 10 10 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399682|ref|YP_001323449.1| - 9.3e-41 137.7 132.7 6.5e-09 35.8 3.5 10.9 5 5 6 12 12 12 11 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399682|ref|YP_001323449.1| - 3.6e-37 127.1 129.0 0.00074 20.4 0.6 14.5 9 5 6 15 15 15 15 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|150399682|ref|YP_001323449.1| - 1.3e-35 120.0 153.7 0.00018 21.4 2.2 14.5 14 1 0 14 14 14 14 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399682|ref|YP_001323449.1| - 4.4e-32 110.0 139.9 7e-08 32.5 11.3 10.0 3 3 5 10 10 10 9 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399682|ref|YP_001323449.1| - 4.5e-29 98.7 142.2 0.00024 21.0 2.5 14.4 14 0 0 14 14 14 13 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399682|ref|YP_001323449.1| - 1.8e-22 79.6 131.8 0.0001 22.7 9.3 13.7 6 3 6 12 12 12 9 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399682|ref|YP_001323449.1| - 1.4e-20 73.5 131.1 8.1e-06 26.2 3.9 12.9 5 3 10 15 15 14 12 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399682|ref|YP_001323449.1| - 1.6e-20 72.5 164.3 0.012 16.5 5.2 14.3 14 0 0 14 14 14 12 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399682|ref|YP_001323449.1| - 3e-15 55.4 139.9 0.055 14.0 3.1 14.3 13 1 1 14 14 14 10 4Fe-4S binding domain Fer4_18 PF13746.6 gi|150399682|ref|YP_001323449.1| - 6.7e-14 52.1 125.3 0.0032 17.7 9.9 10.9 2 2 9 11 11 11 8 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|150399682|ref|YP_001323449.1| - 1.4e-07 31.9 126.3 0.0086 16.6 3.7 14.5 14 0 0 14 14 14 7 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|150399682|ref|YP_001323449.1| - 0.00016 22.3 101.8 0.019 15.7 2.0 14.4 12 3 2 14 14 14 5 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|150399682|ref|YP_001323449.1| - 0.014 16.2 5.7 0.014 16.2 5.7 12.9 7 4 6 14 14 14 0 4Fe-4S dicluster domain TMEM107 PF14995.6 gi|150399683|ref|YP_001323450.1| - 0.11 12.9 1.4 0.14 12.6 1.4 1.1 1 0 0 1 1 1 0 Transmembrane protein CCB1 PF12046.8 gi|150399683|ref|YP_001323450.1| - 0.19 11.1 0.6 0.23 10.8 0.6 1.1 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B DUF4064 PF13273.6 gi|150399683|ref|YP_001323450.1| - 1 9.7 9.0 0.2 11.9 4.5 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) MnhB PF04039.13 gi|150399684|ref|YP_001323451.1| - 5.7e-20 71.9 11.8 5.7e-20 71.9 11.8 2.2 2 1 1 3 3 3 1 Domain related to MnhB subunit of Na+/H+ antiporter DUF1700 PF08006.11 gi|150399685|ref|YP_001323452.1| - 0.00025 20.6 1.7 0.00029 20.4 1.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) DuoxA PF10204.9 gi|150399685|ref|YP_001323452.1| - 0.0073 15.3 1.1 0.0078 15.2 1.1 1.1 1 0 0 1 1 1 1 Dual oxidase maturation factor Proton_antipo_M PF00361.20 gi|150399686|ref|YP_001323453.1| - 2.7e-45 154.8 20.9 2.7e-45 154.8 20.9 1.9 2 0 0 2 2 2 1 Proton-conducting membrane transporter NADHdeh_related PF10125.9 gi|150399686|ref|YP_001323453.1| - 6.3e-12 45.3 8.5 6.3e-12 45.3 8.5 2.6 1 1 0 2 2 2 1 NADH dehydrogenase I, subunit N related protein Tim17 PF02466.19 gi|150399686|ref|YP_001323453.1| - 0.049 14.0 3.1 0.055 13.8 1.1 2.2 2 0 0 2 2 2 0 Tim17/Tim22/Tim23/Pmp24 family DUF412 PF04217.13 gi|150399686|ref|YP_001323453.1| - 0.32 10.9 4.4 0.19 11.6 0.5 2.5 3 0 0 3 3 3 0 Protein of unknown function, DUF412 Ferlin_C PF16165.5 gi|150399686|ref|YP_001323453.1| - 7.1 6.6 6.8 0.44 10.5 0.3 2.3 3 0 0 3 3 3 0 Ferlin C-terminus Oxidored_q2 PF00420.24 gi|150399687|ref|YP_001323454.1| - 3.3e-24 84.5 5.5 3.9e-24 84.3 5.5 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2108 PF09881.9 gi|150399687|ref|YP_001323454.1| - 0.004 17.1 5.5 0.004 17.1 5.5 1.6 2 0 0 2 2 2 1 Predicted membrane protein (DUF2108) DUF4418 PF14387.6 gi|150399687|ref|YP_001323454.1| - 4.2 7.6 7.1 40 4.5 7.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4418) ABC_tran PF00005.27 gi|150399688|ref|YP_001323455.1| - 2e-51 174.1 0.0 2.2e-28 99.5 0.0 2.7 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|150399688|ref|YP_001323455.1| - 1.2e-11 44.9 10.1 0.0049 16.7 0.3 4.3 2 2 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|150399688|ref|YP_001323455.1| - 2.6e-10 40.7 1.2 0.012 15.9 0.0 4.1 4 0 0 4 4 4 3 AAA domain RsgA_GTPase PF03193.16 gi|150399688|ref|YP_001323455.1| - 2.4e-09 37.3 0.6 0.0023 17.8 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase SMC_N PF02463.19 gi|150399688|ref|YP_001323455.1| - 1.1e-07 31.5 4.5 0.00072 19.0 0.1 3.9 3 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|150399688|ref|YP_001323455.1| - 1.3e-07 31.3 0.2 0.017 14.9 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|150399688|ref|YP_001323455.1| - 1.9e-05 25.1 0.1 0.098 13.0 0.1 2.6 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|150399688|ref|YP_001323455.1| - 8.3e-05 23.2 9.8 0.046 14.2 3.2 3.6 3 2 0 3 3 3 2 AAA domain Rad17 PF03215.15 gi|150399688|ref|YP_001323455.1| - 8.8e-05 22.5 0.0 0.074 13.0 0.0 2.7 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_15 PF13175.6 gi|150399688|ref|YP_001323455.1| - 0.00011 22.1 4.3 1.8 8.2 0.1 3.5 2 1 1 3 3 3 2 AAA ATPase domain AAA_18 PF13238.6 gi|150399688|ref|YP_001323455.1| - 0.00023 21.7 0.0 0.87 10.1 0.0 3.0 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|150399688|ref|YP_001323455.1| - 0.00031 20.2 0.1 0.2 11.1 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein AAA_30 PF13604.6 gi|150399688|ref|YP_001323455.1| - 0.00031 20.5 0.0 0.63 9.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain SbcCD_C PF13558.6 gi|150399688|ref|YP_001323455.1| - 0.00035 20.8 0.0 0.037 14.3 0.0 3.1 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 gi|150399688|ref|YP_001323455.1| - 0.0005 20.1 0.9 0.15 12.2 0.0 3.3 3 1 0 3 3 3 1 50S ribosome-binding GTPase AAA_28 PF13521.6 gi|150399688|ref|YP_001323455.1| - 0.00056 20.2 0.1 1.3 9.2 0.0 2.4 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|150399688|ref|YP_001323455.1| - 0.00069 19.4 0.9 0.58 9.9 0.0 3.4 4 0 0 4 4 3 1 IstB-like ATP binding protein AAA PF00004.29 gi|150399688|ref|YP_001323455.1| - 0.0018 18.7 0.2 3.8 7.9 0.0 4.1 4 1 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|150399688|ref|YP_001323455.1| - 0.0055 16.5 1.5 2.2 8.0 0.0 3.2 4 0 0 4 4 4 1 AAA domain NB-ARC PF00931.22 gi|150399688|ref|YP_001323455.1| - 0.0067 15.7 0.1 2.3 7.4 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain AAA_33 PF13671.6 gi|150399688|ref|YP_001323455.1| - 0.015 15.5 0.1 5.9 7.1 0.0 2.5 2 1 0 2 2 2 0 AAA domain Adeno_IVa2 PF02456.15 gi|150399688|ref|YP_001323455.1| - 0.015 14.1 0.1 0.17 10.6 0.0 2.1 2 0 0 2 2 2 0 Adenovirus IVa2 protein AAA_7 PF12775.7 gi|150399688|ref|YP_001323455.1| - 0.022 14.3 0.1 0.88 9.1 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_13 PF13166.6 gi|150399688|ref|YP_001323455.1| - 0.026 13.2 0.1 0.63 8.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain PRK PF00485.18 gi|150399688|ref|YP_001323455.1| - 0.032 13.9 0.3 3.9 7.2 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family MobB PF03205.14 gi|150399688|ref|YP_001323455.1| - 0.034 14.1 0.2 0.62 10.0 0.0 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_5 PF07728.14 gi|150399688|ref|YP_001323455.1| - 0.043 13.8 0.2 4.8 7.2 0.0 3.0 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) Roc PF08477.13 gi|150399688|ref|YP_001323455.1| - 0.047 13.9 0.0 4.6 7.5 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Cytidylate_kin PF02224.18 gi|150399688|ref|YP_001323455.1| - 0.065 12.9 0.1 2.4 7.9 0.2 2.4 2 0 0 2 2 2 0 Cytidylate kinase AAA_25 PF13481.6 gi|150399688|ref|YP_001323455.1| - 0.11 12.1 0.2 26 4.3 0.0 3.3 3 0 0 3 3 3 0 AAA domain Sigma54_activat PF00158.26 gi|150399688|ref|YP_001323455.1| - 0.11 12.2 0.4 15 5.2 0.0 3.0 3 0 0 3 3 3 0 Sigma-54 interaction domain ATP-synt_ab PF00006.25 gi|150399688|ref|YP_001323455.1| - 0.12 12.0 0.1 3.4 7.3 0.0 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain TsaE PF02367.17 gi|150399688|ref|YP_001323455.1| - 0.14 12.2 0.2 2.9 7.9 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_19 PF13245.6 gi|150399688|ref|YP_001323455.1| - 0.24 11.7 1.5 12 6.2 0.3 3.0 2 1 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|150399688|ref|YP_001323455.1| - 0.47 10.5 2.3 12 6.0 0.0 3.4 3 1 0 4 4 3 0 AAA domain NACHT PF05729.12 gi|150399688|ref|YP_001323455.1| - 0.57 10.1 1.8 20 5.0 0.2 2.7 2 0 0 2 2 2 0 NACHT domain Thioredoxin_3 PF13192.6 gi|150399689|ref|YP_001323456.1| - 3.3e-17 62.3 1.2 3.7e-17 62.1 1.2 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|150399689|ref|YP_001323456.1| - 1.3e-13 50.9 0.1 1.7e-13 50.5 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin PF00085.20 gi|150399689|ref|YP_001323456.1| - 4.6e-09 36.2 0.0 5.1e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|150399689|ref|YP_001323456.1| - 6.2e-09 35.9 0.0 0.00063 19.6 0.0 2.0 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 gi|150399689|ref|YP_001323456.1| - 2.4e-07 31.1 0.7 0.012 15.8 0.0 2.0 1 1 1 2 2 2 2 Thioredoxin DUF1223 PF06764.11 gi|150399689|ref|YP_001323456.1| - 0.00024 21.2 0.0 0.001 19.1 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1223) DUF836 PF05768.14 gi|150399689|ref|YP_001323456.1| - 0.0025 18.2 0.0 0.0027 18.1 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) KaiB PF07689.12 gi|150399689|ref|YP_001323456.1| - 0.0037 17.0 0.0 0.005 16.5 0.0 1.2 1 0 0 1 1 1 1 KaiB domain TraF PF13728.6 gi|150399689|ref|YP_001323456.1| - 0.017 14.9 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein Thioredoxin_2 PF13098.6 gi|150399689|ref|YP_001323456.1| - 0.036 14.5 0.1 0.096 13.1 0.1 1.7 1 1 0 1 1 1 0 Thioredoxin-like domain DUF953 PF06110.11 gi|150399689|ref|YP_001323456.1| - 0.055 13.1 1.0 0.081 12.6 0.9 1.4 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) DUF169 PF02596.15 gi|150399690|ref|YP_001323457.1| - 2.9e-54 184.1 0.1 3.3e-54 183.9 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 Radical_SAM PF04055.21 gi|150399691|ref|YP_001323458.1| - 3.5e-19 69.8 2.0 2.1e-17 64.0 1.2 2.6 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|150399691|ref|YP_001323458.1| - 0.042 14.0 5.6 1.3 9.2 2.8 3.3 2 1 0 2 2 2 0 4Fe-4S single cluster domain Hydrolase_6 PF13344.6 gi|150399691|ref|YP_001323458.1| - 0.1 12.7 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Phos_pyr_kin PF08543.12 gi|150399692|ref|YP_001323459.1| - 2.8e-49 167.7 0.0 4.7e-49 167.0 0.0 1.4 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|150399692|ref|YP_001323459.1| - 2.1e-42 144.5 0.0 3.1e-42 144.0 0.0 1.3 1 0 0 1 1 1 1 Thiamine-phosphate synthase Carb_kinase PF01256.17 gi|150399692|ref|YP_001323459.1| - 0.056 12.9 0.0 0.09 12.2 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate kinase AdoMet_Synthase PF01941.19 gi|150399693|ref|YP_001323460.1| - 7.7e-172 571.5 7.7 8.7e-172 571.4 7.7 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) S-AdoMet_synt_N PF00438.20 gi|150399693|ref|YP_001323460.1| - 0.033 14.9 1.1 0.15 12.7 0.4 2.5 2 1 0 2 2 2 0 S-adenosylmethionine synthetase, N-terminal domain DUF223 PF02721.14 gi|150399693|ref|YP_001323460.1| - 0.096 13.0 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function DUF223 Hydrolase PF00702.26 gi|150399694|ref|YP_001323461.1| - 8.9e-16 58.8 0.1 9.8e-15 55.4 0.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|150399694|ref|YP_001323461.1| - 0.00031 20.6 0.8 0.76 9.5 0.0 2.7 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|150399694|ref|YP_001323461.1| - 0.065 13.6 0.0 0.28 11.6 0.0 1.9 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase MMR_HSR1 PF01926.23 gi|150399695|ref|YP_001323462.1| - 9.8e-20 70.7 0.2 1.4e-19 70.3 0.2 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|150399695|ref|YP_001323462.1| - 8e-13 48.2 0.1 1.1e-12 47.8 0.1 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|150399695|ref|YP_001323462.1| - 1.3e-10 41.6 1.4 7.6e-05 22.8 1.0 2.1 1 1 0 2 2 2 2 Dynamin family Gtr1_RagA PF04670.12 gi|150399695|ref|YP_001323462.1| - 2e-08 33.9 0.4 2.6e-08 33.5 0.4 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 gi|150399695|ref|YP_001323462.1| - 6.7e-08 32.3 0.1 5e-06 26.2 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|150399695|ref|YP_001323462.1| - 2.5e-07 30.7 2.4 0.0026 17.7 0.1 2.2 2 0 0 2 2 2 2 RsgA GTPase Arf PF00025.21 gi|150399695|ref|YP_001323462.1| - 1.1e-06 28.2 0.3 1.4e-05 24.7 0.3 2.1 1 1 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 gi|150399695|ref|YP_001323462.1| - 1.3e-06 28.7 0.3 3.8e-05 23.9 0.3 2.3 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase cobW PF02492.19 gi|150399695|ref|YP_001323462.1| - 3.5e-05 23.5 0.1 0.0019 17.8 0.0 2.1 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 gi|150399695|ref|YP_001323462.1| - 5.3e-05 23.0 0.1 0.056 13.2 0.1 2.2 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation Septin PF00735.18 gi|150399695|ref|YP_001323462.1| - 0.00031 20.1 0.6 0.002 17.4 0.1 2.0 2 0 0 2 2 2 1 Septin MMR_HSR1_Xtn PF16897.5 gi|150399695|ref|YP_001323462.1| - 0.00043 20.3 0.1 0.00077 19.4 0.1 1.5 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Ras PF00071.22 gi|150399695|ref|YP_001323462.1| - 0.00047 19.8 0.4 0.077 12.6 0.4 2.3 1 1 0 1 1 1 1 Ras family AIG1 PF04548.16 gi|150399695|ref|YP_001323462.1| - 0.00089 18.6 1.8 0.0019 17.6 1.8 1.9 1 1 0 1 1 1 1 AIG1 family G-alpha PF00503.20 gi|150399695|ref|YP_001323462.1| - 0.0021 17.3 0.6 0.49 9.5 0.0 2.2 2 0 0 2 2 2 2 G-protein alpha subunit ATPase_2 PF01637.18 gi|150399695|ref|YP_001323462.1| - 0.0032 17.4 1.8 0.04 13.8 1.7 2.2 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_15 PF13175.6 gi|150399695|ref|YP_001323462.1| - 0.0033 17.2 2.5 0.0041 16.9 2.5 1.2 1 0 0 1 1 1 1 AAA ATPase domain NOG1 PF06858.14 gi|150399695|ref|YP_001323462.1| - 0.0045 16.7 0.3 0.014 15.2 0.3 1.8 1 1 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) ABC_tran PF00005.27 gi|150399695|ref|YP_001323462.1| - 0.018 15.5 0.1 0.024 15.2 0.1 1.3 1 1 0 1 1 1 0 ABC transporter ATP_bind_1 PF03029.17 gi|150399695|ref|YP_001323462.1| - 0.058 13.2 0.1 1.1 8.9 0.0 2.3 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 gi|150399695|ref|YP_001323462.1| - 0.086 12.5 0.2 0.13 12.0 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|150399695|ref|YP_001323462.1| - 0.15 12.3 0.1 0.27 11.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|150399695|ref|YP_001323462.1| - 0.17 12.2 0.0 2.9 8.3 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain SepF PF04472.12 gi|150399696|ref|YP_001323463.1| - 5.9e-11 42.5 0.5 1.1e-10 41.6 0.4 1.5 2 0 0 2 2 2 1 Cell division protein SepF DUF2099 PF09872.9 gi|150399697|ref|YP_001323464.1| - 5.1e-106 353.6 1.6 5.8e-106 353.4 1.6 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) AA_kinase PF00696.28 gi|150399698|ref|YP_001323465.1| - 1.5e-33 116.4 0.0 1.7e-33 116.3 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family HTH_3 PF01381.22 gi|150399699|ref|YP_001323466.1| - 2e-09 37.4 1.2 8.6e-09 35.3 1.4 1.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|150399699|ref|YP_001323466.1| - 1.1e-07 31.8 4.6 2.5e-07 30.6 3.9 2.0 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|150399699|ref|YP_001323466.1| - 3.8e-06 27.2 0.0 5.4e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|150399699|ref|YP_001323466.1| - 4.9e-06 26.3 1.7 8.7e-06 25.5 1.7 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4428 PF14471.6 gi|150399699|ref|YP_001323466.1| - 0.002 18.0 1.3 0.004 17.0 1.3 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) HTH_35 PF13693.6 gi|150399699|ref|YP_001323466.1| - 0.013 15.5 0.1 0.024 14.7 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 gi|150399699|ref|YP_001323466.1| - 0.028 14.8 0.1 0.059 13.8 0.1 1.6 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain AAA PF00004.29 gi|150399700|ref|YP_001323467.1| - 1e-45 155.4 0.0 2.8e-45 154.0 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|150399700|ref|YP_001323467.1| - 8.1e-17 60.8 1.5 3.8e-16 58.6 0.3 2.4 2 0 0 2 2 2 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 gi|150399700|ref|YP_001323467.1| - 3.1e-09 36.6 0.1 8.7e-09 35.2 0.1 1.8 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 gi|150399700|ref|YP_001323467.1| - 1.9e-08 34.4 0.0 1.5e-07 31.5 0.1 2.4 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 gi|150399700|ref|YP_001323467.1| - 9.1e-08 32.4 1.2 2.5e-07 31.0 0.0 2.2 3 0 0 3 3 2 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|150399700|ref|YP_001323467.1| - 6.1e-07 29.3 0.1 4.7e-06 26.4 0.0 2.2 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|150399700|ref|YP_001323467.1| - 1.6e-06 28.6 0.1 0.00045 20.6 0.1 2.4 1 1 1 2 2 2 1 AAA ATPase domain Prot_ATP_OB_N PF17758.1 gi|150399700|ref|YP_001323467.1| - 1.8e-05 24.3 0.1 3.7e-05 23.3 0.1 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB N-terminal domain DUF815 PF05673.13 gi|150399700|ref|YP_001323467.1| - 4.8e-05 22.6 0.0 0.0001 21.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 gi|150399700|ref|YP_001323467.1| - 9.9e-05 22.6 0.2 0.0071 16.6 0.1 2.5 1 1 0 2 2 2 1 AAA domain TIP49 PF06068.13 gi|150399700|ref|YP_001323467.1| - 0.00027 20.3 1.5 0.00036 19.8 0.0 1.9 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_18 PF13238.6 gi|150399700|ref|YP_001323467.1| - 0.00059 20.4 0.4 0.0017 18.9 0.0 2.0 3 0 0 3 3 1 1 AAA domain AAA_33 PF13671.6 gi|150399700|ref|YP_001323467.1| - 0.00067 19.8 0.0 0.0018 18.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|150399700|ref|YP_001323467.1| - 0.0018 18.3 0.1 0.0048 16.9 0.0 1.7 2 0 0 2 2 1 1 AAA domain AAA_3 PF07726.11 gi|150399700|ref|YP_001323467.1| - 0.0026 17.6 0.0 0.0071 16.2 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|150399700|ref|YP_001323467.1| - 0.0036 17.0 0.0 0.089 12.5 0.0 2.4 1 1 0 1 1 1 1 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|150399700|ref|YP_001323467.1| - 0.0045 16.7 0.0 0.0098 15.6 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.6 gi|150399700|ref|YP_001323467.1| - 0.0054 17.0 0.0 0.012 15.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|150399700|ref|YP_001323467.1| - 0.0077 15.6 0.1 0.02 14.3 0.1 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|150399700|ref|YP_001323467.1| - 0.0086 15.6 0.1 0.033 13.7 0.1 1.8 1 1 0 1 1 1 1 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|150399700|ref|YP_001323467.1| - 0.0093 16.3 0.0 0.025 14.9 0.0 1.8 2 0 0 2 2 1 1 RNA helicase TsaE PF02367.17 gi|150399700|ref|YP_001323467.1| - 0.013 15.5 0.1 0.041 13.9 0.0 1.8 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|150399700|ref|YP_001323467.1| - 0.013 15.2 0.0 0.027 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|150399700|ref|YP_001323467.1| - 0.016 15.2 0.2 0.093 12.6 0.1 2.4 2 0 0 2 2 2 0 NTPase AAA_17 PF13207.6 gi|150399700|ref|YP_001323467.1| - 0.018 15.4 0.2 0.11 12.9 0.0 2.4 2 1 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|150399700|ref|YP_001323467.1| - 0.021 14.2 1.9 0.035 13.5 0.1 2.2 2 1 0 2 2 2 0 KaiC bZIP_1 PF00170.21 gi|150399700|ref|YP_001323467.1| - 0.021 14.9 6.6 0.048 13.8 5.8 2.0 2 0 0 2 2 2 0 bZIP transcription factor Zeta_toxin PF06414.12 gi|150399700|ref|YP_001323467.1| - 0.022 14.0 0.1 0.042 13.1 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin DivIC PF04977.15 gi|150399700|ref|YP_001323467.1| - 0.045 13.5 1.1 0.13 12.0 1.1 1.8 1 0 0 1 1 1 0 Septum formation initiator Bac_DnaA PF00308.18 gi|150399700|ref|YP_001323467.1| - 0.055 13.3 0.0 0.28 11.0 0.0 2.1 1 1 0 1 1 1 0 Bacterial dnaA protein AAA_30 PF13604.6 gi|150399700|ref|YP_001323467.1| - 0.076 12.7 0.1 0.21 11.3 0.1 1.8 1 1 0 1 1 1 0 AAA domain PhoH PF02562.16 gi|150399700|ref|YP_001323467.1| - 0.084 12.3 0.1 0.2 11.1 0.1 1.6 1 0 0 1 1 1 0 PhoH-like protein AAA_25 PF13481.6 gi|150399700|ref|YP_001323467.1| - 0.11 12.1 0.0 0.29 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain YabA PF06156.13 gi|150399700|ref|YP_001323467.1| - 0.12 13.0 0.2 2 9.1 1.0 2.4 2 0 0 2 2 2 0 Initiation control protein YabA Parvo_NS1 PF01057.17 gi|150399700|ref|YP_001323467.1| - 0.14 11.3 0.0 0.24 10.5 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 NACHT PF05729.12 gi|150399700|ref|YP_001323467.1| - 0.16 11.9 0.1 0.48 10.3 0.0 1.8 2 0 0 2 2 2 0 NACHT domain IPT PF01745.16 gi|150399700|ref|YP_001323467.1| - 0.26 10.6 1.7 0.99 8.7 0.0 2.5 3 0 0 3 3 3 0 Isopentenyl transferase NAD_binding_8 PF13450.6 gi|150399701|ref|YP_001323468.1| - 9.5e-10 38.6 0.1 1.9e-09 37.6 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 gi|150399701|ref|YP_001323468.1| - 3.9e-09 36.3 0.0 3.5e-07 29.9 0.0 2.7 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase Pyr_redox PF00070.27 gi|150399701|ref|YP_001323468.1| - 0.0021 18.6 1.1 14 6.3 0.1 3.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|150399701|ref|YP_001323468.1| - 0.006 16.2 0.0 0.25 10.9 0.1 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|150399701|ref|YP_001323468.1| - 0.01 15.1 0.0 0.028 13.7 0.0 2.0 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|150399701|ref|YP_001323468.1| - 0.034 12.8 0.1 4.3 5.9 0.0 2.5 2 0 0 2 2 2 0 HI0933-like protein SBP_bac_11 PF13531.6 gi|150399702|ref|YP_001323469.1| - 2.2e-20 73.4 0.0 3.1e-20 72.9 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|150399702|ref|YP_001323469.1| - 0.038 14.0 0.9 0.1 12.6 0.9 1.9 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein HEAT PF02985.22 gi|150399703|ref|YP_001323470.1| - 8.1e-05 22.6 0.0 3.7 8.1 0.0 5.1 6 0 0 6 6 6 2 HEAT repeat DUF2953 PF11167.8 gi|150399703|ref|YP_001323470.1| - 0.06 13.4 0.2 7.1 6.8 0.0 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2953) SNO PF01174.19 gi|150399704|ref|YP_001323471.1| - 1e-59 201.6 0.1 1.2e-59 201.4 0.1 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.28 gi|150399704|ref|YP_001323471.1| - 6.7e-10 39.1 0.0 1e-09 38.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|150399704|ref|YP_001323471.1| - 3.4e-05 23.5 0.0 6.3e-05 22.7 0.1 1.5 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.17 gi|150399704|ref|YP_001323471.1| - 0.018 14.7 0.1 0.036 13.7 0.0 1.5 2 0 0 2 2 2 0 Peptidase family S51 DJ-1_PfpI PF01965.24 gi|150399704|ref|YP_001323471.1| - 0.041 13.7 0.0 0.071 12.9 0.0 1.5 1 1 0 1 1 1 0 DJ-1/PfpI family Peptidase_C26 PF07722.13 gi|150399704|ref|YP_001323471.1| - 0.057 13.2 0.4 0.51 10.1 0.3 2.5 1 1 0 1 1 1 0 Peptidase C26 DUF43 PF01861.16 gi|150399705|ref|YP_001323472.1| - 1.1e-74 250.7 0.1 1.5e-74 250.3 0.1 1.2 1 0 0 1 1 1 1 Branched-chain polyamine synthase A C-terminal domain N6-adenineMlase PF10237.9 gi|150399705|ref|YP_001323472.1| - 1.9e-06 27.8 0.0 2.8e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 Probable N6-adenine methyltransferase Cons_hypoth95 PF03602.15 gi|150399705|ref|YP_001323472.1| - 1.6e-05 24.7 0.0 3.1e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MarR PF01047.22 gi|150399705|ref|YP_001323472.1| - 0.00016 21.6 0.0 0.00039 20.3 0.0 1.7 1 0 0 1 1 1 1 MarR family Methyltransf_25 PF13649.6 gi|150399705|ref|YP_001323472.1| - 0.0039 17.9 0.0 0.0096 16.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain DUF2072 PF09845.9 gi|150399705|ref|YP_001323472.1| - 0.0053 17.0 4.8 0.015 15.5 1.9 2.5 2 1 0 2 2 2 1 Zn-ribbon containing protein MTS PF05175.14 gi|150399705|ref|YP_001323472.1| - 0.017 14.7 0.0 0.039 13.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase small domain RrnaAD PF00398.20 gi|150399705|ref|YP_001323472.1| - 0.024 13.7 0.0 0.037 13.1 0.0 1.4 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Zn-ribbon_8 PF09723.10 gi|150399705|ref|YP_001323472.1| - 0.069 13.3 3.6 0.43 10.7 1.7 2.4 2 0 0 2 2 2 0 Zinc ribbon domain RuvB_C PF05491.13 gi|150399705|ref|YP_001323472.1| - 0.089 12.7 0.8 0.28 11.1 0.1 2.1 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain DUF2250 PF10007.9 gi|150399705|ref|YP_001323472.1| - 0.18 12.0 2.4 4.3 7.5 0.0 3.0 4 0 0 4 4 4 0 Uncharacterized protein conserved in archaea (DUF2250) TFIIS_C PF01096.18 gi|150399705|ref|YP_001323472.1| - 10 6.1 6.4 8.8 6.3 0.3 2.7 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) Ribosomal_S8e PF01201.22 gi|150399706|ref|YP_001323473.1| - 6.3e-32 110.6 8.9 7.1e-32 110.4 8.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e OTCace_N PF02729.21 gi|150399707|ref|YP_001323474.1| - 3e-50 170.1 0.0 4.6e-50 169.5 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|150399707|ref|YP_001323474.1| - 1.3e-25 90.3 0.0 1.7e-25 89.9 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DUF2304 PF10066.9 gi|150399708|ref|YP_001323475.1| - 1.3e-24 86.4 5.5 1.6e-24 86.2 5.5 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) TMEM238 PF15125.6 gi|150399708|ref|YP_001323475.1| - 1.7 8.9 8.5 0.23 11.7 4.1 1.8 2 0 0 2 2 2 0 TMEM238 protein family Reticulon PF02453.17 gi|150399708|ref|YP_001323475.1| - 4.4 7.2 8.9 0.37 10.7 2.1 1.9 1 1 1 2 2 2 0 Reticulon TP_methylase PF00590.20 gi|150399710|ref|YP_001323477.1| - 1.3e-44 152.7 0.1 1.6e-44 152.4 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|150399710|ref|YP_001323477.1| - 0.046 14.1 0.1 0.1 13.0 0.0 1.7 1 1 0 1 1 1 0 Radical SAM superfamily DUF521 PF04412.13 gi|150399711|ref|YP_001323478.1| - 2.8e-161 536.8 0.1 3.1e-161 536.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Sep15_SelM PF08806.11 gi|150399711|ref|YP_001323478.1| - 0.085 13.0 1.1 0.29 11.3 0.4 2.1 2 0 0 2 2 2 0 Sep15/SelM redox domain F420_ligase PF01996.16 gi|150399712|ref|YP_001323479.1| - 4.7e-32 111.3 0.0 5.5e-32 111.0 0.0 1.1 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Adaptin_N PF01602.20 gi|150399713|ref|YP_001323480.1| - 6.5e-16 58.0 23.9 4.3e-11 42.1 8.3 2.7 1 1 2 3 3 3 3 Adaptin N terminal region HEAT PF02985.22 gi|150399713|ref|YP_001323480.1| - 6.6e-12 44.6 0.1 0.00027 20.9 0.0 6.0 5 0 0 5 5 5 2 HEAT repeat HEAT_2 PF13646.6 gi|150399713|ref|YP_001323480.1| - 3.5e-11 43.3 0.0 7.4e-05 23.1 0.0 3.7 3 2 1 4 4 4 3 HEAT repeats HEAT_EZ PF13513.6 gi|150399713|ref|YP_001323480.1| - 5.1e-06 26.9 0.0 2.9 8.5 0.0 4.7 5 1 1 6 6 6 2 HEAT-like repeat Cnd1 PF12717.7 gi|150399713|ref|YP_001323480.1| - 2.9e-05 24.2 9.9 0.0003 20.9 1.9 4.0 1 1 1 3 3 3 1 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 gi|150399713|ref|YP_001323480.1| - 3.4e-05 23.7 0.2 5.3 7.2 0.0 5.4 6 0 0 6 6 6 1 Armadillo/beta-catenin-like repeat Cnd3 PF12719.7 gi|150399713|ref|YP_001323480.1| - 0.0002 20.6 0.8 0.27 10.4 0.0 3.0 2 2 0 2 2 2 2 Nuclear condensing complex subunits, C-term domain Vac14_Fab1_bd PF12755.7 gi|150399713|ref|YP_001323480.1| - 0.0038 17.8 1.3 5.1 7.8 0.1 3.9 3 1 0 3 3 3 1 Vacuolar 14 Fab1-binding region Tti2 PF10521.9 gi|150399713|ref|YP_001323480.1| - 0.039 13.5 2.4 0.36 10.3 0.0 3.1 3 1 0 3 3 3 0 Tti2 family DUF5071 PF16804.5 gi|150399713|ref|YP_001323480.1| - 0.25 11.6 2.9 6.8 7.0 0.0 3.5 4 0 0 4 4 4 0 Domain of unknown function (DUF5071) Arch_flagellin PF01917.16 gi|150399714|ref|YP_001323481.1| - 4e-53 180.0 9.0 4.6e-53 179.8 9.0 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin AI-2E_transport PF01594.16 gi|150399714|ref|YP_001323481.1| - 0.038 13.1 0.1 0.051 12.7 0.1 1.1 1 0 0 1 1 1 0 AI-2E family transporter bPH_3 PF14470.6 gi|150399714|ref|YP_001323481.1| - 0.12 12.7 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial PH domain Arch_flagellin PF01917.16 gi|150399715|ref|YP_001323482.1| - 7.9e-52 175.7 10.3 9.3e-52 175.5 10.3 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.16 gi|150399716|ref|YP_001323483.1| - 5.2e-42 143.8 6.9 6.2e-42 143.6 6.9 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin FlaC_arch PF05377.11 gi|150399717|ref|YP_001323484.1| - 2.4e-21 75.8 19.4 6.9e-21 74.4 4.0 3.2 3 0 0 3 3 3 2 Flagella accessory protein C (FlaC) CENP-F_leu_zip PF10473.9 gi|150399717|ref|YP_001323484.1| - 0.0012 18.8 10.1 0.013 15.5 2.4 2.4 2 1 0 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Snapin_Pallidin PF14712.6 gi|150399717|ref|YP_001323484.1| - 0.0066 16.8 3.2 0.0066 16.8 3.2 1.9 2 0 0 2 2 1 1 Snapin/Pallidin Med4 PF10018.9 gi|150399717|ref|YP_001323484.1| - 0.007 16.1 1.4 0.012 15.3 1.2 1.5 1 1 0 1 1 1 1 Vitamin-D-receptor interacting Mediator subunit 4 DUF1664 PF07889.12 gi|150399717|ref|YP_001323484.1| - 0.0079 16.2 9.0 0.015 15.4 0.5 2.7 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) MYCBPAP PF14646.6 gi|150399717|ref|YP_001323484.1| - 0.0096 14.9 0.7 0.012 14.6 0.7 1.2 1 0 0 1 1 1 1 MYCBP-associated protein family DUF641 PF04859.12 gi|150399717|ref|YP_001323484.1| - 0.011 16.1 0.8 0.011 16.1 0.8 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Sec34 PF04136.15 gi|150399717|ref|YP_001323484.1| - 0.011 15.6 3.3 0.045 13.6 0.3 2.4 1 1 1 2 2 2 0 Sec34-like family CLZ PF16526.5 gi|150399717|ref|YP_001323484.1| - 0.013 15.8 3.0 3.1 8.2 0.2 2.6 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HALZ PF02183.18 gi|150399717|ref|YP_001323484.1| - 0.03 14.5 10.0 0.72 10.1 0.7 3.3 2 1 1 3 3 3 0 Homeobox associated leucine zipper FtsK_alpha PF17854.1 gi|150399717|ref|YP_001323484.1| - 0.051 13.7 0.9 0.12 12.6 0.9 1.6 1 0 0 1 1 1 0 FtsK alpha domain DUF3452 PF11934.8 gi|150399717|ref|YP_001323484.1| - 0.078 12.5 1.8 2 8.0 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3452) DUF2353 PF09789.9 gi|150399717|ref|YP_001323484.1| - 0.083 12.2 10.1 0.068 12.5 3.5 2.2 1 1 1 2 2 2 0 Uncharacterized coiled-coil protein (DUF2353) GIT_CC PF16559.5 gi|150399717|ref|YP_001323484.1| - 0.094 12.6 6.4 2.2 8.2 0.5 3.2 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor XhlA PF10779.9 gi|150399717|ref|YP_001323484.1| - 0.1 12.8 16.0 0.37 11.0 0.7 3.3 3 0 0 3 3 3 0 Haemolysin XhlA YabA PF06156.13 gi|150399717|ref|YP_001323484.1| - 0.11 13.1 11.8 1.5 9.5 9.0 2.6 1 1 1 2 2 1 0 Initiation control protein YabA DUF2431 PF10354.9 gi|150399717|ref|YP_001323484.1| - 0.12 12.7 2.6 1 9.6 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF2431) Glutaminase PF04960.15 gi|150399717|ref|YP_001323484.1| - 0.12 11.5 1.2 0.16 11.2 1.2 1.2 1 0 0 1 1 1 0 Glutaminase Shugoshin_N PF07558.11 gi|150399717|ref|YP_001323484.1| - 0.15 11.9 6.7 0.23 11.4 1.9 3.2 2 1 0 2 2 2 0 Shugoshin N-terminal coiled-coil region Cob_adeno_trans PF01923.18 gi|150399717|ref|YP_001323484.1| - 0.15 12.2 0.8 0.23 11.6 0.6 1.4 1 1 0 1 1 1 0 Cobalamin adenosyltransferase bZIP_1 PF00170.21 gi|150399717|ref|YP_001323484.1| - 0.19 11.9 18.4 0.18 11.9 1.2 3.6 3 1 1 4 4 3 0 bZIP transcription factor COG2 PF06148.11 gi|150399717|ref|YP_001323484.1| - 0.19 11.8 5.3 0.16 12.1 2.2 2.3 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Fzo_mitofusin PF04799.13 gi|150399717|ref|YP_001323484.1| - 0.19 11.3 5.5 0.45 10.1 1.1 2.2 1 1 1 2 2 2 0 fzo-like conserved region TMF_TATA_bd PF12325.8 gi|150399717|ref|YP_001323484.1| - 0.2 11.9 9.6 2.2 8.5 2.2 2.8 2 1 0 2 2 2 0 TATA element modulatory factor 1 TATA binding Cnn_1N PF07989.11 gi|150399717|ref|YP_001323484.1| - 0.22 11.7 14.0 0.032 14.4 6.3 2.7 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF812 PF05667.11 gi|150399717|ref|YP_001323484.1| - 0.28 10.0 11.3 0.38 9.6 11.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) H-kinase_dim PF02895.14 gi|150399717|ref|YP_001323484.1| - 0.29 11.5 3.3 3.6 8.0 3.3 2.4 1 1 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain DUF2205 PF10224.9 gi|150399717|ref|YP_001323484.1| - 0.34 10.9 9.8 2.9 7.9 2.0 2.7 3 0 0 3 3 2 0 Short coiled-coil protein UPF0449 PF15136.6 gi|150399717|ref|YP_001323484.1| - 0.35 11.3 10.8 0.64 10.5 2.9 2.7 3 0 0 3 3 2 0 Uncharacterised protein family UPF0449 Baculo_PEP_C PF04513.12 gi|150399717|ref|YP_001323484.1| - 0.37 10.8 9.5 0.76 9.8 3.6 2.4 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus bZIP_2 PF07716.15 gi|150399717|ref|YP_001323484.1| - 0.37 10.9 11.4 4 7.6 0.3 3.4 3 0 0 3 3 3 0 Basic region leucine zipper BST2 PF16716.5 gi|150399717|ref|YP_001323484.1| - 0.41 11.3 7.3 2.9 8.5 0.2 3.0 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 Prominin PF05478.11 gi|150399717|ref|YP_001323484.1| - 0.44 8.4 8.8 1.8 6.4 8.2 1.8 1 1 1 2 2 2 0 Prominin APC_N_CC PF16689.5 gi|150399717|ref|YP_001323484.1| - 0.45 10.6 5.6 3.4 7.8 1.3 2.6 2 0 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain GreA_GreB_N PF03449.15 gi|150399717|ref|YP_001323484.1| - 0.53 10.5 8.2 0.62 10.3 0.4 3.4 2 1 2 4 4 4 0 Transcription elongation factor, N-terminal Syntaxin_2 PF14523.6 gi|150399717|ref|YP_001323484.1| - 0.55 10.6 8.5 1.3 9.5 1.3 2.6 1 1 1 2 2 2 0 Syntaxin-like protein TMPIT PF07851.13 gi|150399717|ref|YP_001323484.1| - 0.84 8.8 4.4 1.1 8.5 4.4 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF4559 PF15112.6 gi|150399717|ref|YP_001323484.1| - 0.94 9.1 9.2 1.1 8.8 9.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) THOC7 PF05615.13 gi|150399717|ref|YP_001323484.1| - 1.2 9.4 8.8 4.1 7.7 8.8 1.9 1 1 0 1 1 1 0 Tho complex subunit 7 DUF4446 PF14584.6 gi|150399717|ref|YP_001323484.1| - 1.3 9.0 9.3 5.5 7.0 0.4 2.7 1 1 1 3 3 3 0 Protein of unknown function (DUF4446) Vps51 PF08700.11 gi|150399717|ref|YP_001323484.1| - 1.3 9.1 10.5 3.3 7.8 0.3 3.4 3 1 1 4 4 3 0 Vps51/Vps67 Syntaxin-6_N PF09177.11 gi|150399717|ref|YP_001323484.1| - 1.3 9.6 7.4 5 7.8 1.1 2.7 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Fungal_TACC PF12709.7 gi|150399717|ref|YP_001323484.1| - 1.7 9.1 9.1 3.4 8.2 0.2 2.7 3 0 0 3 3 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins APG6_N PF17675.1 gi|150399717|ref|YP_001323484.1| - 1.9 9.0 10.7 7.2 7.1 5.5 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region PBECR1 PF18809.1 gi|150399717|ref|YP_001323484.1| - 2.4 8.9 9.9 7.9 7.2 0.5 2.7 1 1 1 3 3 3 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1 BLOC1_2 PF10046.9 gi|150399717|ref|YP_001323484.1| - 3.6 7.9 14.7 3 8.2 2.5 2.6 2 1 0 3 3 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DivIC PF04977.15 gi|150399717|ref|YP_001323484.1| - 6 6.7 11.1 2 8.2 0.1 3.3 3 1 1 4 4 3 0 Septum formation initiator DUF4665 PF15679.5 gi|150399717|ref|YP_001323484.1| - 6.4 7.5 12.3 9.8 6.9 0.3 3.1 1 1 1 3 3 3 0 Domain of unknown function (DUF4665) TRAF_BIRC3_bd PF16673.5 gi|150399717|ref|YP_001323484.1| - 8.6 6.2 11.0 0.14 12.0 0.6 2.8 3 0 0 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain Arch_fla_DE PF04659.13 gi|150399718|ref|YP_001323485.1| - 1.6e-30 104.8 0.4 4.3e-30 103.4 0.4 1.8 1 0 0 1 1 1 1 Archaeal flagella protein DUF1389 PF07146.11 gi|150399718|ref|YP_001323485.1| - 0.011 15.1 0.1 0.011 15.1 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1389) MapZ_EC1 PF18041.1 gi|150399718|ref|YP_001323485.1| - 1.9 8.8 9.6 0.78 10.0 5.6 2.2 2 1 1 3 3 3 0 MapZ extracellular domain 1 HSBP1 PF06825.12 gi|150399718|ref|YP_001323485.1| - 4.2 7.3 9.4 9.8 6.1 0.1 4.3 2 1 1 3 3 3 0 Heat shock factor binding protein 1 IZUMO PF15005.6 gi|150399718|ref|YP_001323485.1| - 6.5 7.3 5.9 14 6.2 2.9 2.6 2 1 0 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated Arch_fla_DE PF04659.13 gi|150399719|ref|YP_001323486.1| - 3.6e-27 94.1 0.0 5.2e-27 93.5 0.0 1.2 1 0 0 1 1 1 1 Archaeal flagella protein Arch_flagellin PF01917.16 gi|150399721|ref|YP_001323488.1| - 2e-27 96.4 4.0 2.3e-27 96.2 4.0 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin DUF1573 PF07610.11 gi|150399721|ref|YP_001323488.1| - 0.0047 16.9 0.1 0.048 13.7 0.1 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1573) GP11 PF08677.10 gi|150399721|ref|YP_001323488.1| - 0.042 13.3 0.5 0.051 13.0 0.5 1.1 1 0 0 1 1 1 0 GP11 baseplate wedge protein ATPase PF06745.13 gi|150399722|ref|YP_001323489.1| - 2.8e-12 46.5 0.4 3.4e-12 46.2 0.4 1.1 1 0 0 1 1 1 1 KaiC Rad51 PF08423.11 gi|150399722|ref|YP_001323489.1| - 0.00011 21.6 0.3 0.0002 20.7 0.3 1.5 1 1 0 1 1 1 1 Rad51 RecA PF00154.21 gi|150399722|ref|YP_001323489.1| - 0.04 13.4 0.7 0.11 11.9 0.7 1.8 1 1 0 1 1 1 0 recA bacterial DNA recombination protein AAA_14 PF13173.6 gi|150399722|ref|YP_001323489.1| - 0.12 12.4 1.4 0.7 9.9 1.4 2.1 1 1 0 1 1 1 0 AAA domain CobU PF02283.16 gi|150399722|ref|YP_001323489.1| - 0.12 11.9 0.1 6.7 6.2 0.0 2.1 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase PAXNEB PF05625.11 gi|150399722|ref|YP_001323489.1| - 0.16 11.1 1.3 0.78 8.8 0.7 1.9 1 1 1 2 2 2 0 PAXNEB protein T2SSE PF00437.20 gi|150399723|ref|YP_001323490.1| - 1.1e-43 149.3 0.0 2.1e-43 148.3 0.0 1.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_15 PF13175.6 gi|150399723|ref|YP_001323490.1| - 0.0012 18.6 1.0 0.034 13.8 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|150399723|ref|YP_001323490.1| - 0.0047 16.6 0.1 0.01 15.5 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|150399723|ref|YP_001323490.1| - 0.0067 16.7 0.0 0.018 15.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|150399723|ref|YP_001323490.1| - 0.02 15.4 0.0 0.053 14.0 0.0 1.6 1 0 0 1 1 1 0 ABC transporter Microtub_bd PF16796.5 gi|150399723|ref|YP_001323490.1| - 0.079 12.9 1.0 0.44 10.5 0.2 2.4 3 1 0 3 3 3 0 Microtubule binding Phytoreo_Pns PF05451.11 gi|150399723|ref|YP_001323490.1| - 0.16 11.1 0.0 1.7 7.7 0.0 2.3 2 1 0 2 2 2 0 Phytoreovirus nonstructural protein Pns10/11 AAA_23 PF13476.6 gi|150399723|ref|YP_001323490.1| - 0.46 10.9 4.2 0.14 12.6 0.8 1.8 2 0 0 2 2 2 0 AAA domain T2SSF PF00482.23 gi|150399724|ref|YP_001323491.1| - 4.4e-17 62.2 1.6 5.6e-09 36.0 0.0 3.3 3 0 0 3 3 3 2 Type II secretion system (T2SS), protein F UbiA PF01040.18 gi|150399725|ref|YP_001323492.1| - 4.9e-37 127.6 9.9 6.3e-37 127.2 9.9 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family YndJ PF14158.6 gi|150399725|ref|YP_001323492.1| - 0.00024 20.5 5.0 0.087 12.1 1.0 2.3 2 0 0 2 2 2 2 YndJ-like protein G0-G1_switch_2 PF15103.6 gi|150399725|ref|YP_001323492.1| - 0.36 11.3 0.9 0.92 10.0 0.3 1.9 1 1 1 2 2 2 0 G0/G1 switch protein 2 Claudin_2 PF13903.6 gi|150399725|ref|YP_001323492.1| - 2 8.1 16.7 0.056 13.2 2.1 2.6 3 1 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction AP_endonuc_2 PF01261.24 gi|150399726|ref|YP_001323493.1| - 4.1e-13 49.2 0.0 5.2e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvdE PF03851.14 gi|150399726|ref|YP_001323493.1| - 0.072 12.3 0.1 0.09 12.0 0.1 1.2 1 0 0 1 1 1 0 UV-endonuclease UvdE UPF0179 PF03684.13 gi|150399727|ref|YP_001323494.1| - 1e-46 158.3 7.1 1.1e-46 158.2 7.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) HI0933_like PF03486.14 gi|150399727|ref|YP_001323494.1| - 0.034 12.9 0.0 0.043 12.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein SIS PF01380.22 gi|150399728|ref|YP_001323495.1| - 2.4e-33 114.8 1.0 3e-22 78.9 0.3 2.3 2 0 0 2 2 2 2 SIS domain GATase_7 PF13537.6 gi|150399728|ref|YP_001323495.1| - 1.5e-16 60.4 0.1 6e-16 58.5 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|150399728|ref|YP_001323495.1| - 4.8e-16 59.2 0.0 8.7e-16 58.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|150399728|ref|YP_001323495.1| - 0.00012 21.1 0.1 0.0002 20.3 0.1 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II PAPS_reduct PF01507.19 gi|150399729|ref|YP_001323496.1| - 1.1e-46 159.1 0.0 2.7e-46 157.8 0.0 1.7 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family QueC PF06508.13 gi|150399729|ref|YP_001323496.1| - 0.00095 18.7 0.0 0.002 17.6 0.0 1.5 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|150399729|ref|YP_001323496.1| - 0.0016 17.6 0.0 0.0025 17.0 0.0 1.3 1 0 0 1 1 1 1 NAD synthase ATP13 PF12921.7 gi|150399729|ref|YP_001323496.1| - 0.044 13.6 0.2 0.16 11.9 0.2 1.9 1 1 0 1 1 1 0 Mitochondrial ATPase expression DHHA1 PF02272.19 gi|150399730|ref|YP_001323497.1| - 3.8e-15 56.5 0.8 4.5e-14 53.0 0.2 2.4 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|150399730|ref|YP_001323497.1| - 0.032 14.4 0.1 0.067 13.4 0.1 1.5 1 0 0 1 1 1 0 DHH family Bestrophin PF01062.21 gi|150399730|ref|YP_001323497.1| - 0.13 11.6 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel Metallophos PF00149.28 gi|150399732|ref|YP_001323499.1| - 7.5e-17 62.5 0.4 9.6e-17 62.2 0.4 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|150399732|ref|YP_001323499.1| - 7.3e-12 45.8 0.0 2.3e-11 44.2 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|150399732|ref|YP_001323499.1| - 3.4e-11 43.0 0.1 9.7e-11 41.5 0.1 1.8 1 1 0 1 1 1 1 Metallophosphoesterase, calcineurin superfamily DNA_pol_E_B PF04042.16 gi|150399732|ref|YP_001323499.1| - 0.00029 20.2 0.0 0.00047 19.6 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Lipase_GDSL PF00657.22 gi|150399732|ref|YP_001323499.1| - 0.00036 20.6 1.1 0.00065 19.7 1.2 1.3 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Class_IIIsignal PF04021.12 gi|150399733|ref|YP_001323500.1| - 3.8e-10 39.4 2.0 4.9e-10 39.1 2.0 1.2 1 0 0 1 1 1 1 Class III signal peptide SseC PF04888.12 gi|150399733|ref|YP_001323500.1| - 0.007 16.0 2.7 0.0072 16.0 2.7 1.0 1 0 0 1 1 1 1 Secretion system effector C (SseC) like family Arch_flagellin PF01917.16 gi|150399733|ref|YP_001323500.1| - 0.011 15.9 3.1 0.012 15.8 3.1 1.1 1 0 0 1 1 1 0 Archaebacterial flagellin DUF2371 PF10177.9 gi|150399733|ref|YP_001323500.1| - 0.12 12.6 0.1 0.12 12.5 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) FeoB_associated PF12669.7 gi|150399733|ref|YP_001323500.1| - 0.68 10.4 2.1 1.4 9.4 2.1 1.5 1 1 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Ost5 PF05251.12 gi|150399734|ref|YP_001323501.1| - 0.00044 20.5 2.3 0.00044 20.5 2.3 6.2 5 2 4 9 9 9 1 Oligosaccharyltransferase subunit 5 Class_IIIsignal PF04021.12 gi|150399735|ref|YP_001323502.1| - 1.4e-09 37.6 1.8 2e-09 37.1 1.8 1.2 1 0 0 1 1 1 1 Class III signal peptide TMP_2 PF06791.13 gi|150399735|ref|YP_001323502.1| - 0.003 17.3 2.8 0.0032 17.1 2.8 1.1 1 0 0 1 1 1 1 Prophage tail length tape measure protein Arch_flagellin PF01917.16 gi|150399735|ref|YP_001323502.1| - 0.047 13.9 5.2 0.052 13.7 5.2 1.1 1 0 0 1 1 1 0 Archaebacterial flagellin DUF775 PF05603.12 gi|150399735|ref|YP_001323502.1| - 0.11 12.1 0.4 0.11 12.0 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF775) TruB_N PF01509.18 gi|150399736|ref|YP_001323503.1| - 1.2e-24 87.4 0.3 2.7e-21 76.5 0.3 3.2 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|150399736|ref|YP_001323503.1| - 2.1e-22 79.0 0.0 4.3e-22 78.0 0.0 1.6 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain DKCLD PF08068.12 gi|150399736|ref|YP_001323503.1| - 1.3e-17 63.6 0.1 3.3e-17 62.3 0.1 1.7 1 0 0 1 1 1 1 DKCLD (NUC011) domain PUA PF01472.20 gi|150399736|ref|YP_001323503.1| - 1.1e-16 60.6 3.1 2.3e-16 59.5 3.1 1.6 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|150399736|ref|YP_001323503.1| - 0.0057 16.9 0.1 0.022 15.0 0.1 2.0 2 0 0 2 2 2 1 UPF0113 PUA domain Fer4 PF00037.27 gi|150399737|ref|YP_001323504.1| - 6.2e-12 44.8 15.1 6e-06 25.9 1.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399737|ref|YP_001323504.1| - 4.1e-08 33.7 8.7 5.4e-08 33.3 8.7 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399737|ref|YP_001323504.1| - 4.8e-08 33.0 8.9 6.6e-08 32.6 8.9 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399737|ref|YP_001323504.1| - 6.3e-08 32.6 14.3 0.0019 18.3 3.9 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399737|ref|YP_001323504.1| - 1.9e-07 30.8 15.9 2.4e-05 24.2 4.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|150399737|ref|YP_001323504.1| - 2.4e-07 31.6 8.3 0.00076 20.4 0.7 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|150399737|ref|YP_001323504.1| - 6.2e-07 29.4 11.8 2.1e-06 27.7 12.1 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|150399737|ref|YP_001323504.1| - 2.7e-05 24.6 8.6 0.011 16.3 0.8 2.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_2 PF12797.7 gi|150399737|ref|YP_001323504.1| - 0.00012 21.9 14.8 0.00027 20.8 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399737|ref|YP_001323504.1| - 0.00055 20.2 11.7 0.013 15.9 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399737|ref|YP_001323504.1| - 0.00085 19.8 11.3 0.023 15.2 11.3 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150399737|ref|YP_001323504.1| - 0.00094 19.9 9.8 0.0057 17.4 0.6 2.4 2 1 0 2 2 2 1 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|150399737|ref|YP_001323504.1| - 0.0067 17.3 7.6 0.63 10.9 1.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399737|ref|YP_001323504.1| - 0.012 16.5 16.1 0.35 11.9 3.2 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|150399737|ref|YP_001323504.1| - 0.014 15.6 12.0 0.09 13.0 1.5 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399737|ref|YP_001323504.1| - 0.027 14.9 13.2 0.66 10.5 13.3 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|150399737|ref|YP_001323504.1| - 0.045 13.9 9.1 0.11 12.6 9.1 1.6 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Tfb5 PF06331.12 gi|150399738|ref|YP_001323505.1| - 0.094 12.7 0.8 0.094 12.7 0.8 1.8 2 0 0 2 2 2 0 Transcription factor TFIIH complex subunit Tfb5 TPP_enzyme_C PF02775.21 gi|150399739|ref|YP_001323506.1| - 8.6e-16 58.1 0.1 2.1e-15 56.8 0.1 1.6 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 gi|150399739|ref|YP_001323506.1| - 0.063 12.2 0.0 0.078 11.9 0.0 1.2 1 0 0 1 1 1 0 Dehydrogenase E1 component His_biosynth PF00977.21 gi|150399740|ref|YP_001323507.1| - 3.7e-27 95.3 2.5 1.3e-26 93.4 2.5 1.8 1 1 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.14 gi|150399740|ref|YP_001323507.1| - 0.0049 16.2 0.1 0.0092 15.3 0.1 1.4 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG PRAI PF00697.22 gi|150399740|ref|YP_001323507.1| - 0.027 14.2 0.7 0.031 14.0 0.7 1.3 1 1 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IGPS PF00218.21 gi|150399740|ref|YP_001323507.1| - 0.086 12.0 0.1 1 8.5 0.0 2.0 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase TMP-TENI PF02581.17 gi|150399740|ref|YP_001323507.1| - 0.1 11.9 0.1 0.17 11.2 0.1 1.3 1 0 0 1 1 1 0 Thiamine monophosphate synthase Molybdopterin PF00384.22 gi|150399741|ref|YP_001323508.1| - 2e-15 56.7 0.0 1.5e-10 40.6 0.0 2.1 2 0 0 2 2 2 2 Molybdopterin oxidoreductase Fer4 PF00037.27 gi|150399742|ref|YP_001323509.1| - 9.6e-56 183.5 122.8 1.8e-06 27.5 2.0 12.1 12 0 0 12 12 12 11 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399742|ref|YP_001323509.1| - 4.2e-44 148.9 97.1 6e-10 39.6 10.6 7.4 7 0 0 7 7 7 6 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150399742|ref|YP_001323509.1| - 1.9e-36 122.6 119.4 2.9e-06 27.1 0.8 12.2 12 0 0 12 12 12 12 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399742|ref|YP_001323509.1| - 9.3e-35 118.6 101.8 1.4e-06 28.4 11.1 8.5 3 2 8 11 11 11 11 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399742|ref|YP_001323509.1| - 2.7e-33 113.9 113.2 3.8e-09 36.5 13.1 8.5 3 3 8 11 11 11 11 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399742|ref|YP_001323509.1| - 3.6e-33 113.5 103.3 1.5e-10 41.0 10.9 9.1 6 2 3 9 9 9 8 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399742|ref|YP_001323509.1| - 4.1e-33 114.1 108.6 0.00068 20.5 1.2 12.1 9 2 4 13 13 13 11 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|150399742|ref|YP_001323509.1| - 2.3e-26 90.2 116.7 0.0004 20.3 2.6 12.2 12 0 0 12 12 12 11 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399742|ref|YP_001323509.1| - 3.3e-19 69.1 102.9 0.0002 21.8 9.1 9.5 6 3 0 7 7 7 6 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150399742|ref|YP_001323509.1| - 1.7e-12 47.7 110.5 0.00057 20.4 10.8 10.8 4 4 8 12 12 12 9 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399742|ref|YP_001323509.1| - 2.1e-10 40.8 141.1 0.024 15.5 5.1 12.5 12 1 0 12 12 12 8 4Fe-4S binding domain Fer4_18 PF13746.6 gi|150399742|ref|YP_001323509.1| - 3.3e-10 40.2 99.8 0.0028 17.8 9.7 8.5 2 2 6 8 8 8 7 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399742|ref|YP_001323509.1| - 2e-07 31.0 121.8 0.011 16.1 2.3 12.2 12 0 0 12 12 12 6 4Fe-4S binding domain Fer4_13 PF13370.6 gi|150399742|ref|YP_001323509.1| - 0.0049 17.4 1.1 0.0049 17.4 1.1 12.6 12 1 0 12 12 12 3 4Fe-4S single cluster domain of Ferredoxin I PAAR_motif PF05488.13 gi|150399742|ref|YP_001323509.1| - 0.025 14.8 2.6 0.025 14.8 2.6 3.0 3 0 0 3 3 2 0 PAAR motif Fer4_15 PF13459.6 gi|150399742|ref|YP_001323509.1| - 0.15 12.8 0.4 0.15 12.8 0.4 12.9 10 3 2 12 12 12 0 4Fe-4S single cluster domain Fer4_5 PF12801.7 gi|150399742|ref|YP_001323509.1| - 0.36 10.8 4.4 17 5.4 0.0 4.1 4 0 0 4 4 4 0 4Fe-4S binding domain NiFeSe_Hases PF00374.19 gi|150399743|ref|YP_001323510.1| - 0.068 12.1 0.1 0.075 11.9 0.1 1.0 1 0 0 1 1 1 0 Nickel-dependent hydrogenase NiFeSe_Hases PF00374.19 gi|150399744|ref|YP_001323511.1| - 8.9e-36 123.8 0.5 9.9e-24 84.1 0.0 3.0 2 1 1 3 3 3 3 Nickel-dependent hydrogenase Oxidored_q6 PF01058.22 gi|150399745|ref|YP_001323512.1| - 1.5e-30 105.7 0.1 2.4e-30 105.1 0.1 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit FlpD PF02662.16 gi|150399746|ref|YP_001323513.1| - 2.4e-46 156.7 0.1 2.7e-46 156.5 0.1 1.0 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit zf-ZPR1 PF03367.13 gi|150399746|ref|YP_001323513.1| - 0.17 11.7 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 ZPR1 zinc-finger domain Pyr_redox_2 PF07992.14 gi|150399747|ref|YP_001323514.1| - 3.9e-22 78.8 0.1 1.6e-21 76.8 0.1 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4 PF00037.27 gi|150399747|ref|YP_001323514.1| - 1.6e-20 72.0 42.2 5.6e-06 26.0 3.9 5.0 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399747|ref|YP_001323514.1| - 1.2e-14 54.6 36.6 4.1e-09 36.9 9.2 4.2 3 1 2 5 5 5 4 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399747|ref|YP_001323514.1| - 2e-13 51.1 26.6 0.002 19.0 0.9 5.0 5 0 0 5 5 4 4 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|150399747|ref|YP_001323514.1| - 3.4e-13 49.5 31.9 3.1e-05 24.0 11.8 4.9 4 1 1 5 5 4 4 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399747|ref|YP_001323514.1| - 6.2e-12 45.5 24.2 3.1e-07 30.5 9.5 3.6 4 1 0 4 4 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399747|ref|YP_001323514.1| - 3.1e-11 43.2 41.0 4.2e-07 30.0 9.0 4.8 4 1 1 5 5 5 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399747|ref|YP_001323514.1| - 1.2e-10 40.8 42.4 0.00026 20.9 3.8 5.2 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399747|ref|YP_001323514.1| - 2.1e-07 30.7 56.5 0.0012 18.8 3.3 5.6 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399747|ref|YP_001323514.1| - 4.8e-07 30.2 27.5 0.021 15.4 0.9 5.2 5 0 0 5 5 5 4 4Fe-4S dicluster domain DAO PF01266.24 gi|150399747|ref|YP_001323514.1| - 5.2e-07 29.6 0.2 0.0056 16.3 0.2 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase Fer4_4 PF12800.7 gi|150399747|ref|YP_001323514.1| - 1.3e-06 28.4 35.7 0.0021 18.4 1.1 5.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399747|ref|YP_001323514.1| - 3.8e-06 27.2 31.4 0.023 15.1 0.4 4.7 3 2 1 4 4 3 3 4Fe-4S dicluster domain NAD_binding_8 PF13450.6 gi|150399747|ref|YP_001323514.1| - 9.1e-06 25.8 0.1 2e-05 24.7 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Fer4_22 PF17179.4 gi|150399747|ref|YP_001323514.1| - 2e-05 25.3 22.2 0.053 14.4 0.5 4.6 4 0 0 4 4 4 3 4Fe-4S dicluster domain FAD_binding_2 PF00890.24 gi|150399747|ref|YP_001323514.1| - 0.0002 20.6 0.1 0.00037 19.7 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|150399747|ref|YP_001323514.1| - 0.00036 20.0 0.0 0.00063 19.2 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|150399747|ref|YP_001323514.1| - 0.00086 18.5 0.1 0.0013 17.9 0.1 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|150399747|ref|YP_001323514.1| - 0.0023 16.7 0.3 0.0041 15.9 0.2 1.4 1 1 0 1 1 1 1 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|150399747|ref|YP_001323514.1| - 0.009 15.3 0.1 0.03 13.6 0.1 1.9 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Fer4_15 PF13459.6 gi|150399747|ref|YP_001323514.1| - 0.017 15.9 32.3 0.03 15.1 0.6 5.4 4 1 1 5 5 5 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|150399747|ref|YP_001323514.1| - 0.026 15.1 41.2 0.12 12.9 4.4 4.6 3 1 1 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I Pyr_redox_3 PF13738.6 gi|150399747|ref|YP_001323514.1| - 0.055 12.7 0.1 0.27 10.5 0.0 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|150399747|ref|YP_001323514.1| - 0.1 11.8 0.1 0.19 10.9 0.1 1.4 1 0 0 1 1 1 0 FAD binding domain ETF_QO PF05187.13 gi|150399747|ref|YP_001323514.1| - 1.1 9.4 3.9 3.4 7.9 0.1 3.0 2 1 1 3 3 3 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_3 PF12798.7 gi|150399747|ref|YP_001323514.1| - 6.9 7.9 59.3 0.2 12.7 5.0 5.9 5 0 0 5 5 5 0 4Fe-4S binding domain CarS-like PF01864.17 gi|150399748|ref|YP_001323515.1| - 3e-65 219.5 12.2 3.4e-65 219.3 12.2 1.0 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|150399748|ref|YP_001323515.1| - 0.00027 20.8 12.8 0.00043 20.1 10.8 2.0 1 1 1 2 2 2 1 Cytidylyltransferase family MNHE PF01899.16 gi|150399748|ref|YP_001323515.1| - 2.4 7.9 11.5 0.29 10.9 6.6 2.0 2 1 0 2 2 2 0 Na+/H+ ion antiporter subunit SSF PF00474.17 gi|150399750|ref|YP_001323517.1| - 1.1e-63 215.5 35.0 1.4e-63 215.2 35.0 1.1 1 0 0 1 1 1 1 Sodium:solute symporter family ACT PF01842.25 gi|150399751|ref|YP_001323518.1| - 0.0016 18.2 3.1 0.16 11.8 0.1 3.3 2 1 1 3 3 3 1 ACT domain COMM_domain PF07258.14 gi|150399751|ref|YP_001323518.1| - 0.012 15.7 1.3 0.054 13.6 0.2 2.3 2 1 0 2 2 2 0 COMM domain DASH_Dad4 PF08650.10 gi|150399751|ref|YP_001323518.1| - 0.048 13.6 2.6 0.48 10.4 0.4 3.0 3 1 1 4 4 4 0 DASH complex subunit Dad4 FAD-oxidase_C PF02913.19 gi|150399751|ref|YP_001323518.1| - 0.15 11.7 0.0 0.38 10.3 0.0 1.6 2 0 0 2 2 2 0 FAD linked oxidases, C-terminal domain IBV_3B PF03622.13 gi|150399751|ref|YP_001323518.1| - 0.17 12.1 0.6 0.43 10.8 0.5 1.8 1 1 0 1 1 1 0 IBV 3B protein Homoserine_dh PF00742.19 gi|150399752|ref|YP_001323519.1| - 1.4e-55 187.9 1.9 1.6e-55 187.7 0.7 1.6 2 0 0 2 2 2 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|150399752|ref|YP_001323519.1| - 2.1e-09 38.1 0.0 4.7e-09 36.9 0.0 1.7 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|150399752|ref|YP_001323519.1| - 1.4e-05 24.9 0.1 3.4e-05 23.7 0.1 1.7 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DUF2096 PF09869.9 gi|150399753|ref|YP_001323520.1| - 0.35 10.9 0.1 0.35 10.9 0.1 3.3 4 0 0 4 4 4 0 Uncharacterized protein conserved in archaea (DUF2096) Creatininase PF02633.14 gi|150399755|ref|YP_001323522.1| - 1.8e-12 47.2 0.0 2.5e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 Creatinine amidohydrolase Nop10p PF04135.12 gi|150399756|ref|YP_001323523.1| - 1.2e-20 73.2 3.1 1.3e-20 73.1 3.1 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family PolC_DP2 PF03833.13 gi|150399756|ref|YP_001323523.1| - 0.014 13.3 0.4 0.014 13.3 0.4 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF4295 PF14128.6 gi|150399756|ref|YP_001323523.1| - 0.068 13.0 0.5 0.1 12.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4295) zf-B_box PF00643.24 gi|150399756|ref|YP_001323523.1| - 0.072 13.3 3.5 0.083 13.1 3.5 1.1 1 0 0 1 1 1 0 B-box zinc finger RecR PF02132.15 gi|150399756|ref|YP_001323523.1| - 0.077 12.6 0.9 0.097 12.3 0.9 1.2 1 0 0 1 1 1 0 RecR protein zf-ribbon_3 PF13248.6 gi|150399756|ref|YP_001323523.1| - 0.094 12.2 3.8 0.19 11.2 3.8 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Toxin_17 PF08086.11 gi|150399756|ref|YP_001323523.1| - 0.22 11.9 8.2 1.1 9.6 5.7 2.1 2 0 0 2 2 2 0 Ergtoxin family EIF_2_alpha PF07541.12 gi|150399757|ref|YP_001323524.1| - 2.1e-23 82.6 0.4 6.6e-23 81.0 0.1 1.9 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|150399757|ref|YP_001323524.1| - 2e-16 60.1 0.4 5.4e-16 58.7 0.4 1.7 1 0 0 1 1 1 1 S1 RNA binding domain EXOSC1 PF10447.9 gi|150399757|ref|YP_001323524.1| - 9.7e-05 22.9 0.1 0.0003 21.4 0.1 1.9 1 1 0 1 1 1 1 Exosome component EXOSC1/CSL4 HNOB PF07700.15 gi|150399757|ref|YP_001323524.1| - 0.022 14.7 0.0 0.038 13.9 0.0 1.4 1 0 0 1 1 1 0 Haem-NO-binding CwfJ_C_2 PF04676.14 gi|150399757|ref|YP_001323524.1| - 0.055 14.4 0.2 0.17 12.8 0.2 1.8 1 0 0 1 1 1 0 Protein similar to CwfJ C-terminus 2 Ribosomal_S27e PF01667.17 gi|150399758|ref|YP_001323525.1| - 1.1e-20 73.0 3.6 1.2e-20 72.9 3.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 DUF1610 PF07754.11 gi|150399758|ref|YP_001323525.1| - 0.0016 18.3 0.7 0.034 14.1 0.2 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF1610) ADD_ATRX PF17981.1 gi|150399758|ref|YP_001323525.1| - 0.0058 16.5 0.7 0.85 9.5 0.1 2.2 2 0 0 2 2 2 2 Cysteine Rich ADD domain TF_Zn_Ribbon PF08271.12 gi|150399758|ref|YP_001323525.1| - 0.0066 15.9 1.0 0.0082 15.6 1.0 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zinc_ribbon_4 PF13717.6 gi|150399758|ref|YP_001323525.1| - 0.0071 16.2 4.1 0.73 9.8 0.6 2.5 2 0 0 2 2 2 2 zinc-ribbon domain zf-RING_14 PF17978.1 gi|150399758|ref|YP_001323525.1| - 0.028 14.8 0.4 0.03 14.7 0.4 1.1 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zinc_ribbon_6 PF14599.6 gi|150399758|ref|YP_001323525.1| - 0.034 14.2 1.9 0.049 13.6 1.9 1.3 1 0 0 1 1 1 0 Zinc-ribbon zf-ACC PF17848.1 gi|150399758|ref|YP_001323525.1| - 0.17 12.0 4.7 0.43 10.7 0.4 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zinc_ribbon_12 PF11331.8 gi|150399758|ref|YP_001323525.1| - 0.19 11.6 4.2 3.2 7.6 0.3 2.2 1 1 1 2 2 2 0 Probable zinc-ribbon domain HalOD2 PF18547.1 gi|150399758|ref|YP_001323525.1| - 0.68 9.9 3.8 1.1 9.3 0.2 2.1 1 1 1 2 2 2 0 Halobacterial output domain 2 Ribosomal_L44 PF00935.19 gi|150399759|ref|YP_001323526.1| - 6.1e-27 93.9 1.4 6.1e-27 93.9 1.4 1.4 2 0 0 2 2 1 1 Ribosomal protein L44 Ribosomal_L33 PF00471.20 gi|150399759|ref|YP_001323526.1| - 0.006 17.0 5.7 0.006 17.0 5.7 2.1 2 0 0 2 2 2 1 Ribosomal protein L33 Zn-ribbon_8 PF09723.10 gi|150399759|ref|YP_001323526.1| - 0.018 15.2 1.5 1 9.5 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|150399759|ref|YP_001323526.1| - 0.025 14.0 1.9 0.66 9.5 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.7 gi|150399759|ref|YP_001323526.1| - 0.064 13.3 1.4 0.14 12.2 1.4 1.5 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_10 PF10058.9 gi|150399759|ref|YP_001323526.1| - 0.067 12.9 0.6 2.5 7.9 0.0 2.2 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn_Tnp_IS1595 PF12760.7 gi|150399759|ref|YP_001323526.1| - 0.079 12.9 5.3 3.4 7.7 2.2 2.3 2 1 0 2 2 2 0 Transposase zinc-ribbon domain zf-LITAF-like PF10601.9 gi|150399759|ref|YP_001323526.1| - 0.36 11.1 3.6 1.1 9.6 0.5 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain TFIIS_C PF01096.18 gi|150399759|ref|YP_001323526.1| - 0.37 10.7 5.4 6.1 6.8 0.2 2.6 2 1 1 3 3 3 0 Transcription factor S-II (TFIIS) zf_UBZ PF18439.1 gi|150399759|ref|YP_001323526.1| - 0.41 10.3 2.4 2.8 7.6 0.3 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger PyrI_C PF02748.15 gi|150399759|ref|YP_001323526.1| - 1.1 9.2 5.4 9.6 6.2 0.2 2.2 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-H2C2_2 PF13465.6 gi|150399759|ref|YP_001323526.1| - 4.8 7.8 9.3 23 5.7 0.2 2.6 2 1 0 2 2 2 0 Zinc-finger double domain Sld5 PF05916.11 gi|150399760|ref|YP_001323527.1| - 0.00096 19.6 0.3 0.0014 19.1 0.3 1.4 1 0 0 1 1 1 1 GINS complex protein PCNA_N PF00705.18 gi|150399761|ref|YP_001323528.1| - 2e-20 72.8 4.5 2.9e-20 72.3 0.6 2.2 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|150399761|ref|YP_001323528.1| - 2.9e-17 63.1 3.1 1.1e-15 57.9 0.2 2.6 2 1 1 3 3 3 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|150399761|ref|YP_001323528.1| - 2.3e-11 43.6 0.9 3e-11 43.3 0.9 1.1 1 0 0 1 1 1 1 Rad9 Rad1 PF02144.16 gi|150399761|ref|YP_001323528.1| - 2.6e-07 30.0 1.7 1.1e-05 24.7 1.1 2.4 1 1 2 3 3 3 2 Repair protein Rad1/Rec1/Rad17 DNA_pol3_beta_3 PF02768.15 gi|150399761|ref|YP_001323528.1| - 0.04 13.7 1.2 0.077 12.8 0.3 1.9 2 0 0 2 2 2 0 DNA polymerase III beta subunit, C-terminal domain Stn1 PF10451.9 gi|150399761|ref|YP_001323528.1| - 0.11 11.5 0.4 0.24 10.3 0.4 1.6 1 1 0 1 1 1 0 Telomere regulation protein Stn1 LysR_substrate PF03466.20 gi|150399762|ref|YP_001323529.1| - 1.7e-40 138.6 0.0 2e-40 138.4 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 gi|150399762|ref|YP_001323529.1| - 8e-15 54.5 0.0 1.4e-14 53.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family PBP_like_2 PF12849.7 gi|150399762|ref|YP_001323529.1| - 3.3e-05 23.7 0.0 7.7e-05 22.5 0.0 1.6 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|150399762|ref|YP_001323529.1| - 0.00017 20.8 0.0 0.00068 18.8 0.0 1.9 1 1 0 1 1 1 1 PBP superfamily domain HTH_5 PF01022.20 gi|150399762|ref|YP_001323529.1| - 0.003 17.4 0.0 0.0082 16.0 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|150399762|ref|YP_001323529.1| - 0.01 15.9 0.0 0.035 14.2 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_50 PF18024.1 gi|150399762|ref|YP_001323529.1| - 0.013 15.1 0.1 0.038 13.6 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_40 PF14493.6 gi|150399762|ref|YP_001323529.1| - 0.021 15.3 0.2 0.069 13.6 0.1 2.0 2 1 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|150399762|ref|YP_001323529.1| - 0.036 13.6 0.0 0.14 11.7 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding ArlS_N PF18719.1 gi|150399762|ref|YP_001323529.1| - 0.051 13.8 0.1 0.085 13.1 0.1 1.4 1 0 0 1 1 1 0 ArlS sensor domain HTH_11 PF08279.12 gi|150399762|ref|YP_001323529.1| - 0.056 13.4 0.0 0.25 11.3 0.0 2.1 2 0 0 2 2 2 0 HTH domain MarR PF01047.22 gi|150399762|ref|YP_001323529.1| - 0.13 12.2 0.0 0.56 10.2 0.0 2.2 1 0 0 1 1 1 0 MarR family SAM_Ste50p PF09235.10 gi|150399763|ref|YP_001323530.1| - 0.065 13.5 1.0 2.7 8.3 0.1 3.2 3 0 0 3 3 3 0 Ste50p, sterile alpha motif DUF4258 PF14076.6 gi|150399763|ref|YP_001323530.1| - 0.15 12.4 0.2 0.64 10.4 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4258) Robl_LC7 PF03259.17 gi|150399764|ref|YP_001323531.1| - 4.7e-21 74.4 0.3 5.8e-21 74.1 0.3 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain MAPKK1_Int PF08923.10 gi|150399764|ref|YP_001323531.1| - 0.00019 21.2 0.1 0.00024 20.9 0.1 1.1 1 0 0 1 1 1 1 Mitogen-activated protein kinase kinase 1 interacting GTP_EFTU PF00009.27 gi|150399765|ref|YP_001323532.1| - 8.5e-16 58.1 0.2 2.8e-13 49.9 0.2 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 gi|150399765|ref|YP_001323532.1| - 1.9e-13 50.5 0.1 2.6e-13 50.0 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 gi|150399765|ref|YP_001323532.1| - 1.5e-10 40.9 0.1 1.9e-10 40.5 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 gi|150399765|ref|YP_001323532.1| - 2.2e-09 37.6 0.0 3e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 gi|150399765|ref|YP_001323532.1| - 7.7e-08 32.0 0.3 1e-07 31.6 0.3 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family FeoB_N PF02421.18 gi|150399765|ref|YP_001323532.1| - 7.9e-08 32.0 1.0 5.7e-07 29.2 1.0 1.9 1 1 0 1 1 1 1 Ferrous iron transport protein B ATP_bind_1 PF03029.17 gi|150399765|ref|YP_001323532.1| - 1.6e-07 31.4 0.1 1.8e-06 27.9 0.0 2.3 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein RsgA_GTPase PF03193.16 gi|150399765|ref|YP_001323532.1| - 7.9e-06 25.9 0.3 0.026 14.4 0.1 2.1 2 0 0 2 2 2 2 RsgA GTPase PduV-EutP PF10662.9 gi|150399765|ref|YP_001323532.1| - 2.5e-05 24.1 0.5 4.4e-05 23.3 0.5 1.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation Gtr1_RagA PF04670.12 gi|150399765|ref|YP_001323532.1| - 0.00044 19.7 0.5 0.0058 16.0 0.5 2.0 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region AAA_24 PF13479.6 gi|150399765|ref|YP_001323532.1| - 0.007 16.1 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain SRPRB PF09439.10 gi|150399765|ref|YP_001323532.1| - 0.011 15.2 1.0 0.021 14.2 1.0 1.5 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit ATPase_2 PF01637.18 gi|150399765|ref|YP_001323532.1| - 0.016 15.1 0.7 0.028 14.3 0.7 1.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|150399765|ref|YP_001323532.1| - 0.034 14.2 0.5 0.47 10.5 0.5 2.1 1 1 0 1 1 1 0 AAA domain Septin PF00735.18 gi|150399765|ref|YP_001323532.1| - 0.056 12.7 1.0 0.76 9.0 0.0 2.0 2 0 0 2 2 2 0 Septin AAA_28 PF13521.6 gi|150399765|ref|YP_001323532.1| - 0.072 13.3 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|150399765|ref|YP_001323532.1| - 0.14 12.5 0.0 0.23 11.8 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_29 PF13555.6 gi|150399765|ref|YP_001323532.1| - 0.16 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain HMD PF03201.16 gi|150399766|ref|YP_001323533.1| - 3.1e-41 139.5 3.1 6.8e-41 138.4 3.1 1.6 1 0 0 1 1 1 1 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase NAD_binding_2 PF03446.15 gi|150399766|ref|YP_001323533.1| - 8.4e-05 22.8 0.1 0.00023 21.4 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|150399766|ref|YP_001323533.1| - 0.012 15.2 0.3 0.65 9.6 0.3 2.4 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 gi|150399766|ref|YP_001323533.1| - 0.063 13.2 0.4 0.68 9.8 0.0 2.7 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Methyltransf_31 PF13847.6 gi|150399767|ref|YP_001323534.1| - 8.8e-15 54.8 0.0 1.5e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|150399767|ref|YP_001323534.1| - 5.1e-12 46.4 0.0 9e-12 45.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|150399767|ref|YP_001323534.1| - 4.9e-10 39.9 0.0 8.1e-10 39.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|150399767|ref|YP_001323534.1| - 1.3e-09 38.7 0.0 2.2e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|150399767|ref|YP_001323534.1| - 6.3e-08 32.6 0.0 9.9e-08 32.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|150399767|ref|YP_001323534.1| - 1.5e-07 31.0 0.2 3.6e-07 29.7 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|150399767|ref|YP_001323534.1| - 6.8e-07 29.2 0.0 1.5e-06 28.1 0.0 1.5 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 gi|150399767|ref|YP_001323534.1| - 3.3e-06 26.8 0.0 5.6e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|150399767|ref|YP_001323534.1| - 0.00019 20.9 0.0 0.00034 20.0 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|150399767|ref|YP_001323534.1| - 0.011 15.2 0.0 0.54 9.7 0.0 2.2 2 0 0 2 2 2 0 Putative methyltransferase NodS PF05401.11 gi|150399767|ref|YP_001323534.1| - 0.016 14.8 0.0 0.024 14.3 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) PrmA PF06325.13 gi|150399767|ref|YP_001323534.1| - 0.03 13.7 0.0 0.044 13.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DUF4250 PF14056.6 gi|150399767|ref|YP_001323534.1| - 0.062 13.3 0.5 0.21 11.5 0.1 2.1 2 0 0 2 2 1 0 Domain of unknown function (DUF4250) ST7 PF04184.12 gi|150399767|ref|YP_001323534.1| - 0.089 11.2 0.0 0.12 10.8 0.0 1.1 1 0 0 1 1 1 0 ST7 protein Methyltransf_2 PF00891.18 gi|150399767|ref|YP_001323534.1| - 0.091 12.0 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain DUF1495 PF07381.11 gi|150399768|ref|YP_001323535.1| - 2.4e-36 123.4 0.4 2.7e-36 123.3 0.4 1.0 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) DUF4364 PF14277.6 gi|150399768|ref|YP_001323535.1| - 0.014 15.1 0.0 0.025 14.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DUF3873 PF12989.7 gi|150399768|ref|YP_001323535.1| - 0.1 13.0 0.2 0.94 9.9 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3873) Transglut_C PF00927.22 gi|150399769|ref|YP_001323536.1| - 0.078 13.1 2.3 1.4 9.1 0.3 3.9 3 2 1 4 4 4 0 Transglutaminase family, C-terminal ig like domain P_proprotein PF01483.20 gi|150399769|ref|YP_001323536.1| - 0.087 12.9 0.0 0.26 11.3 0.0 1.7 1 0 0 1 1 1 0 Proprotein convertase P-domain YolD PF08863.10 gi|150399769|ref|YP_001323536.1| - 2.6 8.2 5.5 0.69 10.0 0.2 2.9 3 0 0 3 3 3 0 YolD-like protein CobT_C PF11775.8 gi|150399770|ref|YP_001323537.1| - 0.12 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT VWA domain CbiA PF01656.23 gi|150399771|ref|YP_001323538.1| - 4.9e-12 46.0 0.1 6.5e-11 42.4 0.1 2.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|150399771|ref|YP_001323538.1| - 6e-12 45.8 0.3 1.1e-11 44.9 0.3 1.5 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|150399771|ref|YP_001323538.1| - 8.9e-08 31.9 0.0 1.6e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|150399771|ref|YP_001323538.1| - 0.00044 19.5 1.4 0.076 12.2 0.0 2.6 2 1 0 2 2 2 2 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|150399771|ref|YP_001323538.1| - 0.0016 17.9 0.4 0.025 14.1 0.1 2.6 2 1 0 2 2 2 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|150399771|ref|YP_001323538.1| - 0.0077 15.7 0.5 0.014 14.8 0.5 1.6 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RNA_helicase PF00910.22 gi|150399771|ref|YP_001323538.1| - 0.026 14.9 0.1 0.071 13.5 0.1 1.7 1 1 0 1 1 1 0 RNA helicase CLP1_P PF16575.5 gi|150399771|ref|YP_001323538.1| - 0.05 13.4 0.1 0.13 12.0 0.0 1.7 1 1 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop His_biosynth PF00977.21 gi|150399772|ref|YP_001323539.1| - 8.7e-91 303.4 1.3 1e-90 303.2 1.3 1.1 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.15 gi|150399772|ref|YP_001323539.1| - 8e-09 35.3 0.2 1.9e-05 24.2 0.1 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase Dus PF01207.17 gi|150399772|ref|YP_001323539.1| - 1.3e-06 27.7 0.4 0.00041 19.6 0.0 2.2 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) ThiG PF05690.14 gi|150399772|ref|YP_001323539.1| - 1e-05 25.0 0.3 0.021 14.2 0.1 2.6 2 1 1 3 3 3 2 Thiazole biosynthesis protein ThiG DHO_dh PF01180.21 gi|150399772|ref|YP_001323539.1| - 1.3e-05 24.6 0.2 0.053 12.7 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase G3P_antiterm PF04309.12 gi|150399772|ref|YP_001323539.1| - 1.4e-05 24.5 0.4 0.0056 16.1 0.1 2.3 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator TMP-TENI PF02581.17 gi|150399772|ref|YP_001323539.1| - 1.9e-05 24.1 0.4 0.038 13.3 0.1 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase IMPDH PF00478.25 gi|150399772|ref|YP_001323539.1| - 0.0012 17.9 1.1 0.5 9.3 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain PcrB PF01884.17 gi|150399772|ref|YP_001323539.1| - 0.0026 17.3 0.4 0.0083 15.6 0.1 1.8 2 0 0 2 2 2 1 PcrB family GATase_3 PF07685.14 gi|150399773|ref|YP_001323540.1| - 8.1e-11 41.9 0.1 1.4e-10 41.1 0.1 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|150399773|ref|YP_001323540.1| - 7.5e-10 39.0 1.4 5.6e-07 29.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain CbiA PF01656.23 gi|150399773|ref|YP_001323540.1| - 0.0022 18.0 2.3 0.0099 15.9 0.0 2.8 2 2 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain SNO PF01174.19 gi|150399773|ref|YP_001323540.1| - 0.013 15.4 0.1 0.036 13.9 0.1 1.7 1 0 0 1 1 1 0 SNO glutamine amidotransferase family GATase PF00117.28 gi|150399773|ref|YP_001323540.1| - 0.014 15.2 0.0 0.025 14.4 0.0 1.5 1 1 0 1 1 1 0 Glutamine amidotransferase class-I GATase_5 PF13507.6 gi|150399773|ref|YP_001323540.1| - 0.027 13.6 0.5 0.065 12.3 0.1 1.9 2 1 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|150399773|ref|YP_001323540.1| - 0.16 11.8 0.0 0.35 10.7 0.0 1.5 1 0 0 1 1 1 0 DJ-1/PfpI family DUF4013 PF13197.6 gi|150399774|ref|YP_001323541.1| - 1.3e-28 100.0 29.4 1.3e-28 100.0 29.4 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF4013) MCM PF00493.23 gi|150399775|ref|YP_001323542.1| - 1.4e-73 246.7 0.1 2.7e-73 245.8 0.1 1.4 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 gi|150399775|ref|YP_001323542.1| - 2.4e-24 85.6 1.0 1.1e-23 83.4 1.6 1.8 2 0 0 2 2 2 1 MCM AAA-lid domain MCM_OB PF17207.3 gi|150399775|ref|YP_001323542.1| - 1.2e-18 67.1 0.3 3.4e-18 65.7 0.3 1.7 1 0 0 1 1 1 1 MCM OB domain Mg_chelatase PF01078.21 gi|150399775|ref|YP_001323542.1| - 3.2e-07 29.9 0.0 7.3e-05 22.2 0.0 2.5 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|150399775|ref|YP_001323542.1| - 4.8e-06 26.6 0.0 1.9e-05 24.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|150399775|ref|YP_001323542.1| - 0.0024 17.6 0.0 0.084 12.6 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_3 PF07726.11 gi|150399775|ref|YP_001323542.1| - 0.0028 17.5 0.1 0.01 15.7 0.0 2.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) CxC3 PF18804.1 gi|150399775|ref|YP_001323542.1| - 0.0055 16.5 0.1 0.014 15.2 0.1 1.6 1 0 0 1 1 1 1 CxC3 like cysteine cluster associated with KDZ transposases Imm51 PF15595.6 gi|150399775|ref|YP_001323542.1| - 0.019 14.9 0.1 0.23 11.4 0.0 2.6 2 0 0 2 2 2 0 Immunity protein 51 APH_6_hur PF04655.14 gi|150399775|ref|YP_001323542.1| - 0.073 12.4 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 Aminoglycoside/hydroxyurea antibiotic resistance kinase Zn-ribbon_8 PF09723.10 gi|150399775|ref|YP_001323542.1| - 0.089 12.9 1.6 0.24 11.6 1.6 1.7 1 0 0 1 1 1 0 Zinc ribbon domain AAA_16 PF13191.6 gi|150399775|ref|YP_001323542.1| - 0.14 12.5 0.3 0.42 11.0 0.1 1.8 2 0 0 2 2 2 0 AAA ATPase domain HNH_5 PF14279.6 gi|150399775|ref|YP_001323542.1| - 8.2 6.4 8.3 0.76 9.7 0.1 3.3 4 0 0 4 4 4 0 HNH endonuclease HTH_DeoR PF08220.12 gi|150399776|ref|YP_001323543.1| - 9.4e-05 22.1 0.1 0.00024 20.8 0.1 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain TrmB PF01978.19 gi|150399776|ref|YP_001323543.1| - 0.00054 19.8 0.1 0.0013 18.6 0.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 gi|150399776|ref|YP_001323543.1| - 0.0013 19.1 0.2 0.0036 17.7 0.2 1.7 1 0 0 1 1 1 1 Penicillinase repressor HTH_23 PF13384.6 gi|150399776|ref|YP_001323543.1| - 0.0027 17.5 0.0 0.027 14.3 0.0 2.3 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 gi|150399776|ref|YP_001323543.1| - 0.0073 16.3 0.0 0.12 12.4 0.0 2.5 3 0 0 3 3 3 1 Winged helix-turn helix Peptidase_A17 PF05380.13 gi|150399776|ref|YP_001323543.1| - 0.012 15.6 0.3 0.026 14.6 0.3 1.5 1 0 0 1 1 1 0 Pao retrotransposon peptidase HTH_IclR PF09339.10 gi|150399776|ref|YP_001323543.1| - 0.022 14.5 0.0 0.043 13.6 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|150399776|ref|YP_001323543.1| - 0.04 13.5 0.6 0.15 11.7 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|150399776|ref|YP_001323543.1| - 0.052 13.4 0.0 0.16 11.8 0.0 1.9 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_40 PF14493.6 gi|150399776|ref|YP_001323543.1| - 0.07 13.6 0.2 0.35 11.3 0.0 2.3 1 1 0 2 2 2 0 Helix-turn-helix domain Phage_rep_O PF04492.13 gi|150399776|ref|YP_001323543.1| - 0.096 13.3 2.5 0.31 11.6 2.4 2.0 1 1 0 1 1 1 0 Bacteriophage replication protein O MarR_2 PF12802.7 gi|150399776|ref|YP_001323543.1| - 0.13 12.2 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_5 PF01022.20 gi|150399777|ref|YP_001323544.1| - 0.0021 17.9 0.1 0.0035 17.2 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Dimerisation2 PF16864.5 gi|150399777|ref|YP_001323544.1| - 0.026 14.5 0.0 0.043 13.8 0.0 1.3 1 0 0 1 1 1 0 Dimerisation domain TrmB PF01978.19 gi|150399777|ref|YP_001323544.1| - 0.065 13.1 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB AAA_16 PF13191.6 gi|150399778|ref|YP_001323545.1| - 1.7e-09 38.3 0.0 3.4e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain HTH_5 PF01022.20 gi|150399778|ref|YP_001323545.1| - 4.3e-08 32.9 0.0 4.7e-07 29.6 0.0 2.8 4 0 0 4 4 4 1 Bacterial regulatory protein, arsR family ATPase_2 PF01637.18 gi|150399778|ref|YP_001323545.1| - 3.8e-07 30.3 0.0 8.2e-07 29.2 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA PF00004.29 gi|150399778|ref|YP_001323545.1| - 1.7e-06 28.5 0.0 9.1e-06 26.1 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|150399778|ref|YP_001323545.1| - 6.5e-06 26.5 0.0 1.7e-05 25.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|150399778|ref|YP_001323545.1| - 0.0043 17.6 0.2 0.011 16.3 0.0 1.8 2 0 0 2 2 1 1 ABC transporter AAA_14 PF13173.6 gi|150399778|ref|YP_001323545.1| - 0.0054 16.8 0.1 3.7 7.6 0.0 2.5 1 1 1 2 2 2 2 AAA domain NB-ARC PF00931.22 gi|150399778|ref|YP_001323545.1| - 0.0056 15.9 0.0 0.58 9.3 0.0 2.2 2 0 0 2 2 2 1 NB-ARC domain Sigma54_activat PF00158.26 gi|150399778|ref|YP_001323545.1| - 0.016 14.9 0.0 0.028 14.1 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF815 PF05673.13 gi|150399778|ref|YP_001323545.1| - 0.021 14.0 0.1 0.043 13.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DUF2791 PF10923.8 gi|150399778|ref|YP_001323545.1| - 0.026 13.4 0.0 0.073 11.9 0.0 1.8 2 0 0 2 2 2 0 P-loop Domain of unknown function (DUF2791) TrmB PF01978.19 gi|150399778|ref|YP_001323545.1| - 0.046 13.6 0.0 0.13 12.2 0.0 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB PaaX PF07848.12 gi|150399778|ref|YP_001323545.1| - 0.054 13.7 0.0 2.8 8.2 0.0 2.5 2 0 0 2 2 2 0 PaaX-like protein FtsK_SpoIIIE PF01580.18 gi|150399778|ref|YP_001323545.1| - 0.059 12.7 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family RsgA_GTPase PF03193.16 gi|150399778|ref|YP_001323545.1| - 0.087 12.7 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase Sigma70_r4 PF04545.16 gi|150399778|ref|YP_001323545.1| - 0.11 12.0 0.0 4.7 6.8 0.0 3.1 4 0 0 4 4 4 0 Sigma-70, region 4 GCHY-1 PF02649.14 gi|150399779|ref|YP_001323546.1| - 1.8e-79 266.9 4.3 2.1e-79 266.7 4.3 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 DUF5461 PF17545.2 gi|150399779|ref|YP_001323546.1| - 0.028 14.7 0.3 0.1 12.9 0.3 2.0 1 0 0 1 1 1 0 Family of unknown function (DUF5461) B5 PF03484.15 gi|150399779|ref|YP_001323546.1| - 0.61 10.4 2.6 2.8 8.3 0.2 2.8 2 2 0 2 2 2 0 tRNA synthetase B5 domain ATP-grasp_3 PF02655.14 gi|150399780|ref|YP_001323547.1| - 1.3e-41 142.3 0.3 2.5e-41 141.4 0.3 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|150399780|ref|YP_001323547.1| - 7.5e-07 28.7 0.2 0.00044 19.6 0.1 2.2 1 1 1 2 2 2 2 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 gi|150399780|ref|YP_001323547.1| - 1.4e-06 27.7 0.1 1.8e-05 24.1 0.0 2.3 2 0 0 2 2 2 1 YheC/D like ATP-grasp ATPgrasp_Ter PF15632.6 gi|150399780|ref|YP_001323547.1| - 0.00054 19.7 0.0 0.0013 18.5 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon GSH-S_ATP PF02955.16 gi|150399780|ref|YP_001323547.1| - 0.0013 18.1 0.0 0.0028 17.1 0.0 1.5 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain RimK PF08443.11 gi|150399780|ref|YP_001323547.1| - 0.0025 17.4 0.1 0.11 12.1 0.0 2.3 2 0 0 2 2 2 1 RimK-like ATP-grasp domain ATP-grasp PF02222.22 gi|150399780|ref|YP_001323547.1| - 0.019 14.5 0.0 0.086 12.4 0.0 1.9 1 1 0 1 1 1 0 ATP-grasp domain CTV_P33 PF07184.11 gi|150399780|ref|YP_001323547.1| - 0.053 12.6 0.2 0.11 11.5 0.1 1.5 2 0 0 2 2 2 0 Citrus tristeza virus P33 protein TFIIE_alpha PF02002.17 gi|150399781|ref|YP_001323548.1| - 1.8e-29 101.7 5.8 2.4e-29 101.3 5.8 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit HypA PF01155.19 gi|150399781|ref|YP_001323548.1| - 0.0022 18.0 0.1 0.004 17.2 0.1 1.4 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HTH_9 PF08221.11 gi|150399781|ref|YP_001323548.1| - 0.008 16.3 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain TF_Zn_Ribbon PF08271.12 gi|150399781|ref|YP_001323548.1| - 0.01 15.3 1.9 0.01 15.3 1.9 2.3 2 1 1 3 3 3 0 TFIIB zinc-binding TrmB PF01978.19 gi|150399781|ref|YP_001323548.1| - 0.023 14.6 0.0 0.042 13.7 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB zf-LITAF-like PF10601.9 gi|150399781|ref|YP_001323548.1| - 0.025 14.9 0.5 0.039 14.2 0.5 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain SMC_ScpB PF04079.16 gi|150399781|ref|YP_001323548.1| - 0.026 14.1 0.5 4.3 6.9 0.1 2.2 1 1 1 2 2 2 0 Segregation and condensation complex subunit ScpB MarR_2 PF12802.7 gi|150399781|ref|YP_001323548.1| - 0.031 14.1 0.0 0.059 13.3 0.0 1.5 1 1 0 1 1 1 0 MarR family Herpes_glycoH_C PF17488.2 gi|150399781|ref|YP_001323548.1| - 0.056 13.2 0.1 0.12 12.1 0.1 1.5 1 0 0 1 1 1 0 Herpesvirus glycoprotein H C-terminal domain DUF5033 PF16436.5 gi|150399781|ref|YP_001323548.1| - 0.058 13.3 0.1 0.12 12.3 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5033) DUF2072 PF09845.9 gi|150399781|ref|YP_001323548.1| - 0.06 13.6 0.7 0.13 12.5 0.7 1.5 1 0 0 1 1 1 0 Zn-ribbon containing protein C1_2 PF03107.16 gi|150399781|ref|YP_001323548.1| - 0.073 13.4 0.6 0.12 12.7 0.6 1.3 1 0 0 1 1 1 0 C1 domain Rrf2 PF02082.20 gi|150399781|ref|YP_001323548.1| - 0.089 13.1 0.0 0.17 12.2 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_IclR PF09339.10 gi|150399781|ref|YP_001323548.1| - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain Mut7-C PF01927.16 gi|150399781|ref|YP_001323548.1| - 0.11 12.6 0.2 1.3 9.1 0.1 2.2 1 1 1 2 2 2 0 Mut7-C RNAse domain zinc_ribbon_4 PF13717.6 gi|150399781|ref|YP_001323548.1| - 0.15 12.0 1.9 2.4 8.1 1.9 2.3 1 1 0 1 1 1 0 zinc-ribbon domain zf-RRN7 PF11781.8 gi|150399781|ref|YP_001323548.1| - 0.17 11.6 1.3 0.24 11.1 0.1 1.9 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-TFIIB PF13453.6 gi|150399781|ref|YP_001323548.1| - 0.54 9.6 2.9 1.5 8.2 0.9 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger HD PF01966.22 gi|150399782|ref|YP_001323549.1| - 3.9e-13 49.7 0.1 5.5e-13 49.2 0.1 1.2 1 0 0 1 1 1 1 HD domain HDOD PF08668.12 gi|150399782|ref|YP_001323549.1| - 0.064 12.7 0.0 1.2 8.6 0.0 2.1 1 1 1 2 2 2 0 HDOD domain HD_2 PF12917.7 gi|150399782|ref|YP_001323549.1| - 0.097 12.4 0.6 0.45 10.3 0.0 2.2 2 1 1 3 3 3 0 HD containing hydrolase-like enzyme T2SSF PF00482.23 gi|150399783|ref|YP_001323550.1| - 1.3e-10 41.3 0.4 1.3e-10 41.3 0.4 2.2 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F Asp4 PF16996.5 gi|150399783|ref|YP_001323550.1| - 0.61 9.9 0.1 0.61 9.9 0.1 2.6 2 1 0 2 2 2 0 Accessory secretory protein Sec Asp4 T2SSF PF00482.23 gi|150399784|ref|YP_001323551.1| - 7.1e-13 48.6 0.0 7.1e-13 48.6 0.0 2.2 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F DUF3270 PF11674.8 gi|150399784|ref|YP_001323551.1| - 0.00099 19.2 1.0 0.0023 18.0 1.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) DUF5638 PF18688.1 gi|150399784|ref|YP_001323551.1| - 0.031 14.6 0.6 0.23 11.8 0.1 2.4 2 1 1 3 3 3 0 Family of unknown function (DUF5638) ASFV_p27 PF06556.11 gi|150399784|ref|YP_001323551.1| - 0.066 13.3 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus HHA PF05321.11 gi|150399784|ref|YP_001323551.1| - 0.13 12.5 1.2 0.21 11.9 0.1 1.9 2 0 0 2 2 2 0 Haemolysin expression modulating protein T2SSE PF00437.20 gi|150399785|ref|YP_001323552.1| - 4.4e-57 193.2 0.0 6.4e-57 192.7 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 gi|150399785|ref|YP_001323552.1| - 0.00043 19.7 0.1 0.00089 18.7 0.1 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family ABC_tran PF00005.27 gi|150399785|ref|YP_001323552.1| - 0.0098 16.4 0.0 0.034 14.7 0.0 1.8 1 0 0 1 1 1 1 ABC transporter LSM PF01423.22 gi|150399785|ref|YP_001323552.1| - 0.011 15.4 0.0 0.55 10.0 0.0 3.3 2 1 1 3 3 3 0 LSM domain AAA_29 PF13555.6 gi|150399785|ref|YP_001323552.1| - 0.016 14.9 0.1 0.044 13.5 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|150399785|ref|YP_001323552.1| - 0.027 15.0 0.1 0.027 15.0 0.1 2.8 3 0 0 3 3 3 0 AAA domain AAA_19 PF13245.6 gi|150399785|ref|YP_001323552.1| - 0.035 14.5 0.5 0.15 12.4 0.1 2.2 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|150399785|ref|YP_001323552.1| - 0.042 13.1 0.0 0.084 12.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 gi|150399785|ref|YP_001323552.1| - 0.055 13.2 0.0 0.098 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|150399785|ref|YP_001323552.1| - 0.15 11.0 0.1 0.4 9.5 0.0 1.7 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain TFIIB PF00382.19 gi|150399786|ref|YP_001323553.1| - 8e-44 147.6 0.5 8.5e-21 73.8 0.0 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|150399786|ref|YP_001323553.1| - 5.9e-17 60.9 1.3 5.9e-17 60.9 1.3 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|150399786|ref|YP_001323553.1| - 0.00066 19.1 0.8 0.04 13.4 0.1 3.4 3 1 1 4 4 4 1 Sigma-70, region 4 RPA_interact_C PF14768.6 gi|150399786|ref|YP_001323553.1| - 0.0012 19.3 0.3 0.064 13.8 0.1 2.3 2 0 0 2 2 2 1 Replication protein A interacting C-terminal HTH_AsnC-type PF13404.6 gi|150399786|ref|YP_001323553.1| - 0.0036 17.1 0.2 0.019 14.8 0.2 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain UPF0253 PF06786.12 gi|150399786|ref|YP_001323553.1| - 0.0085 16.4 0.1 0.1 12.9 0.0 2.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0253) Lar_restr_allev PF14354.6 gi|150399786|ref|YP_001323553.1| - 0.01 16.2 1.4 0.064 13.6 0.9 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar Cyclin_C PF02984.19 gi|150399786|ref|YP_001323553.1| - 0.07 13.2 0.0 17 5.5 0.0 2.3 2 0 0 2 2 2 0 Cyclin, C-terminal domain OrfB_Zn_ribbon PF07282.11 gi|150399786|ref|YP_001323553.1| - 0.13 12.2 0.7 0.31 11.0 0.7 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Ribosomal_S27e PF01667.17 gi|150399786|ref|YP_001323553.1| - 0.3 10.8 2.3 0.6 9.9 2.3 1.5 1 0 0 1 1 1 0 Ribosomal protein S27 zf-CCHC_4 PF14392.6 gi|150399786|ref|YP_001323553.1| - 0.42 10.4 2.8 1.6 8.5 2.8 2.0 1 0 0 1 1 1 0 Zinc knuckle Vps36-NZF-N PF16988.5 gi|150399786|ref|YP_001323553.1| - 0.84 9.1 2.9 0.93 8.9 1.4 1.8 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain A2L_zn_ribbon PF08792.10 gi|150399786|ref|YP_001323553.1| - 1.1 9.0 4.6 2.9 7.7 4.5 1.7 1 1 1 2 2 2 0 A2L zinc ribbon domain Gar1 PF04410.14 gi|150399787|ref|YP_001323554.1| - 1.7e-06 27.9 0.2 1.9e-06 27.7 0.2 1.2 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region T2SSF PF00482.23 gi|150399788|ref|YP_001323555.1| - 0.00013 22.0 0.1 0.00013 22.0 0.1 2.1 2 1 0 2 2 2 1 Type II secretion system (T2SS), protein F T2SSF PF00482.23 gi|150399789|ref|YP_001323556.1| - 7.1e-13 48.6 0.0 7.1e-13 48.6 0.0 2.2 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F DUF3270 PF11674.8 gi|150399789|ref|YP_001323556.1| - 0.00099 19.2 1.0 0.0023 18.0 1.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) DUF5638 PF18688.1 gi|150399789|ref|YP_001323556.1| - 0.031 14.6 0.6 0.23 11.8 0.1 2.4 2 1 1 3 3 3 0 Family of unknown function (DUF5638) ASFV_p27 PF06556.11 gi|150399789|ref|YP_001323556.1| - 0.066 13.3 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus HHA PF05321.11 gi|150399789|ref|YP_001323556.1| - 0.13 12.5 1.2 0.21 11.9 0.1 1.9 2 0 0 2 2 2 0 Haemolysin expression modulating protein T2SSE PF00437.20 gi|150399790|ref|YP_001323557.1| - 4.4e-57 193.2 0.0 6.4e-57 192.7 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 gi|150399790|ref|YP_001323557.1| - 0.00043 19.7 0.1 0.00089 18.7 0.1 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family ABC_tran PF00005.27 gi|150399790|ref|YP_001323557.1| - 0.0098 16.4 0.0 0.034 14.7 0.0 1.8 1 0 0 1 1 1 1 ABC transporter LSM PF01423.22 gi|150399790|ref|YP_001323557.1| - 0.011 15.4 0.0 0.55 10.0 0.0 3.3 2 1 1 3 3 3 0 LSM domain AAA_29 PF13555.6 gi|150399790|ref|YP_001323557.1| - 0.016 14.9 0.1 0.044 13.5 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|150399790|ref|YP_001323557.1| - 0.027 15.0 0.1 0.027 15.0 0.1 2.8 3 0 0 3 3 3 0 AAA domain AAA_19 PF13245.6 gi|150399790|ref|YP_001323557.1| - 0.035 14.5 0.5 0.15 12.4 0.1 2.2 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|150399790|ref|YP_001323557.1| - 0.042 13.1 0.0 0.084 12.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 gi|150399790|ref|YP_001323557.1| - 0.055 13.2 0.0 0.098 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|150399790|ref|YP_001323557.1| - 0.15 11.0 0.1 0.4 9.5 0.0 1.7 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain TFIIB PF00382.19 gi|150399791|ref|YP_001323558.1| - 8e-44 147.6 0.5 8.5e-21 73.8 0.0 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|150399791|ref|YP_001323558.1| - 5.9e-17 60.9 1.3 5.9e-17 60.9 1.3 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|150399791|ref|YP_001323558.1| - 0.00066 19.1 0.8 0.04 13.4 0.1 3.4 3 1 1 4 4 4 1 Sigma-70, region 4 RPA_interact_C PF14768.6 gi|150399791|ref|YP_001323558.1| - 0.0012 19.3 0.3 0.064 13.8 0.1 2.3 2 0 0 2 2 2 1 Replication protein A interacting C-terminal HTH_AsnC-type PF13404.6 gi|150399791|ref|YP_001323558.1| - 0.0036 17.1 0.2 0.019 14.8 0.2 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain UPF0253 PF06786.12 gi|150399791|ref|YP_001323558.1| - 0.0085 16.4 0.1 0.1 12.9 0.0 2.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0253) Lar_restr_allev PF14354.6 gi|150399791|ref|YP_001323558.1| - 0.01 16.2 1.4 0.064 13.6 0.9 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar Cyclin_C PF02984.19 gi|150399791|ref|YP_001323558.1| - 0.07 13.2 0.0 17 5.5 0.0 2.3 2 0 0 2 2 2 0 Cyclin, C-terminal domain OrfB_Zn_ribbon PF07282.11 gi|150399791|ref|YP_001323558.1| - 0.13 12.2 0.7 0.31 11.0 0.7 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Ribosomal_S27e PF01667.17 gi|150399791|ref|YP_001323558.1| - 0.3 10.8 2.3 0.6 9.9 2.3 1.5 1 0 0 1 1 1 0 Ribosomal protein S27 zf-CCHC_4 PF14392.6 gi|150399791|ref|YP_001323558.1| - 0.42 10.4 2.8 1.6 8.5 2.8 2.0 1 0 0 1 1 1 0 Zinc knuckle Vps36-NZF-N PF16988.5 gi|150399791|ref|YP_001323558.1| - 0.84 9.1 2.9 0.93 8.9 1.4 1.8 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain A2L_zn_ribbon PF08792.10 gi|150399791|ref|YP_001323558.1| - 1.1 9.0 4.6 2.9 7.7 4.5 1.7 1 1 1 2 2 2 0 A2L zinc ribbon domain Gar1 PF04410.14 gi|150399792|ref|YP_001323559.1| - 1.7e-06 27.9 0.2 1.9e-06 27.7 0.2 1.2 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region T2SSF PF00482.23 gi|150399793|ref|YP_001323560.1| - 0.00013 22.0 0.1 0.00013 22.0 0.1 2.1 2 1 0 2 2 2 1 Type II secretion system (T2SS), protein F T2SSF PF00482.23 gi|150399794|ref|YP_001323561.1| - 7.1e-13 48.6 0.0 7.1e-13 48.6 0.0 2.2 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F DUF3270 PF11674.8 gi|150399794|ref|YP_001323561.1| - 0.00099 19.2 1.0 0.0023 18.0 1.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) DUF5638 PF18688.1 gi|150399794|ref|YP_001323561.1| - 0.031 14.6 0.6 0.23 11.8 0.1 2.4 2 1 1 3 3 3 0 Family of unknown function (DUF5638) ASFV_p27 PF06556.11 gi|150399794|ref|YP_001323561.1| - 0.066 13.3 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus HHA PF05321.11 gi|150399794|ref|YP_001323561.1| - 0.13 12.5 1.2 0.21 11.9 0.1 1.9 2 0 0 2 2 2 0 Haemolysin expression modulating protein T2SSE PF00437.20 gi|150399795|ref|YP_001323562.1| - 4.4e-57 193.2 0.0 6.4e-57 192.7 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 gi|150399795|ref|YP_001323562.1| - 0.00043 19.7 0.1 0.00089 18.7 0.1 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family ABC_tran PF00005.27 gi|150399795|ref|YP_001323562.1| - 0.0098 16.4 0.0 0.034 14.7 0.0 1.8 1 0 0 1 1 1 1 ABC transporter LSM PF01423.22 gi|150399795|ref|YP_001323562.1| - 0.011 15.4 0.0 0.55 10.0 0.0 3.3 2 1 1 3 3 3 0 LSM domain AAA_29 PF13555.6 gi|150399795|ref|YP_001323562.1| - 0.016 14.9 0.1 0.044 13.5 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|150399795|ref|YP_001323562.1| - 0.027 15.0 0.1 0.027 15.0 0.1 2.8 3 0 0 3 3 3 0 AAA domain AAA_19 PF13245.6 gi|150399795|ref|YP_001323562.1| - 0.035 14.5 0.5 0.15 12.4 0.1 2.2 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|150399795|ref|YP_001323562.1| - 0.042 13.1 0.0 0.084 12.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 gi|150399795|ref|YP_001323562.1| - 0.055 13.2 0.0 0.098 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|150399795|ref|YP_001323562.1| - 0.15 11.0 0.1 0.4 9.5 0.0 1.7 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain TFIIB PF00382.19 gi|150399796|ref|YP_001323563.1| - 8e-44 147.6 0.5 8.5e-21 73.8 0.0 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|150399796|ref|YP_001323563.1| - 5.9e-17 60.9 1.3 5.9e-17 60.9 1.3 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|150399796|ref|YP_001323563.1| - 0.00066 19.1 0.8 0.04 13.4 0.1 3.4 3 1 1 4 4 4 1 Sigma-70, region 4 RPA_interact_C PF14768.6 gi|150399796|ref|YP_001323563.1| - 0.0012 19.3 0.3 0.064 13.8 0.1 2.3 2 0 0 2 2 2 1 Replication protein A interacting C-terminal HTH_AsnC-type PF13404.6 gi|150399796|ref|YP_001323563.1| - 0.0036 17.1 0.2 0.019 14.8 0.2 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain UPF0253 PF06786.12 gi|150399796|ref|YP_001323563.1| - 0.0085 16.4 0.1 0.1 12.9 0.0 2.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0253) Lar_restr_allev PF14354.6 gi|150399796|ref|YP_001323563.1| - 0.01 16.2 1.4 0.064 13.6 0.9 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar Cyclin_C PF02984.19 gi|150399796|ref|YP_001323563.1| - 0.07 13.2 0.0 17 5.5 0.0 2.3 2 0 0 2 2 2 0 Cyclin, C-terminal domain OrfB_Zn_ribbon PF07282.11 gi|150399796|ref|YP_001323563.1| - 0.13 12.2 0.7 0.31 11.0 0.7 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Ribosomal_S27e PF01667.17 gi|150399796|ref|YP_001323563.1| - 0.3 10.8 2.3 0.6 9.9 2.3 1.5 1 0 0 1 1 1 0 Ribosomal protein S27 zf-CCHC_4 PF14392.6 gi|150399796|ref|YP_001323563.1| - 0.42 10.4 2.8 1.6 8.5 2.8 2.0 1 0 0 1 1 1 0 Zinc knuckle Vps36-NZF-N PF16988.5 gi|150399796|ref|YP_001323563.1| - 0.84 9.1 2.9 0.93 8.9 1.4 1.8 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain A2L_zn_ribbon PF08792.10 gi|150399796|ref|YP_001323563.1| - 1.1 9.0 4.6 2.9 7.7 4.5 1.7 1 1 1 2 2 2 0 A2L zinc ribbon domain Gar1 PF04410.14 gi|150399797|ref|YP_001323564.1| - 1.7e-06 27.9 0.2 1.9e-06 27.7 0.2 1.2 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region T2SSF PF00482.23 gi|150399798|ref|YP_001323565.1| - 0.00013 22.0 0.1 0.00013 22.0 0.1 2.1 2 1 0 2 2 2 1 Type II secretion system (T2SS), protein F T2SSF PF00482.23 gi|150399799|ref|YP_001323566.1| - 7.1e-13 48.6 0.0 7.1e-13 48.6 0.0 2.2 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F DUF3270 PF11674.8 gi|150399799|ref|YP_001323566.1| - 0.00099 19.2 1.0 0.0023 18.0 1.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) DUF5638 PF18688.1 gi|150399799|ref|YP_001323566.1| - 0.031 14.6 0.6 0.23 11.8 0.1 2.4 2 1 1 3 3 3 0 Family of unknown function (DUF5638) ASFV_p27 PF06556.11 gi|150399799|ref|YP_001323566.1| - 0.066 13.3 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus HHA PF05321.11 gi|150399799|ref|YP_001323566.1| - 0.13 12.5 1.2 0.21 11.9 0.1 1.9 2 0 0 2 2 2 0 Haemolysin expression modulating protein T2SSE PF00437.20 gi|150399800|ref|YP_001323567.1| - 4.4e-57 193.2 0.0 6.4e-57 192.7 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 gi|150399800|ref|YP_001323567.1| - 0.00043 19.7 0.1 0.00089 18.7 0.1 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family ABC_tran PF00005.27 gi|150399800|ref|YP_001323567.1| - 0.0098 16.4 0.0 0.034 14.7 0.0 1.8 1 0 0 1 1 1 1 ABC transporter LSM PF01423.22 gi|150399800|ref|YP_001323567.1| - 0.011 15.4 0.0 0.55 10.0 0.0 3.3 2 1 1 3 3 3 0 LSM domain AAA_29 PF13555.6 gi|150399800|ref|YP_001323567.1| - 0.016 14.9 0.1 0.044 13.5 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|150399800|ref|YP_001323567.1| - 0.027 15.0 0.1 0.027 15.0 0.1 2.8 3 0 0 3 3 3 0 AAA domain AAA_19 PF13245.6 gi|150399800|ref|YP_001323567.1| - 0.035 14.5 0.5 0.15 12.4 0.1 2.2 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|150399800|ref|YP_001323567.1| - 0.042 13.1 0.0 0.084 12.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 gi|150399800|ref|YP_001323567.1| - 0.055 13.2 0.0 0.098 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|150399800|ref|YP_001323567.1| - 0.15 11.0 0.1 0.4 9.5 0.0 1.7 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain TFIIB PF00382.19 gi|150399801|ref|YP_001323568.1| - 8e-44 147.6 0.5 8.5e-21 73.8 0.0 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|150399801|ref|YP_001323568.1| - 5.9e-17 60.9 1.3 5.9e-17 60.9 1.3 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|150399801|ref|YP_001323568.1| - 0.00066 19.1 0.8 0.04 13.4 0.1 3.4 3 1 1 4 4 4 1 Sigma-70, region 4 RPA_interact_C PF14768.6 gi|150399801|ref|YP_001323568.1| - 0.0012 19.3 0.3 0.064 13.8 0.1 2.3 2 0 0 2 2 2 1 Replication protein A interacting C-terminal HTH_AsnC-type PF13404.6 gi|150399801|ref|YP_001323568.1| - 0.0036 17.1 0.2 0.019 14.8 0.2 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain UPF0253 PF06786.12 gi|150399801|ref|YP_001323568.1| - 0.0085 16.4 0.1 0.1 12.9 0.0 2.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0253) Lar_restr_allev PF14354.6 gi|150399801|ref|YP_001323568.1| - 0.01 16.2 1.4 0.064 13.6 0.9 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar Cyclin_C PF02984.19 gi|150399801|ref|YP_001323568.1| - 0.07 13.2 0.0 17 5.5 0.0 2.3 2 0 0 2 2 2 0 Cyclin, C-terminal domain OrfB_Zn_ribbon PF07282.11 gi|150399801|ref|YP_001323568.1| - 0.13 12.2 0.7 0.31 11.0 0.7 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Ribosomal_S27e PF01667.17 gi|150399801|ref|YP_001323568.1| - 0.3 10.8 2.3 0.6 9.9 2.3 1.5 1 0 0 1 1 1 0 Ribosomal protein S27 zf-CCHC_4 PF14392.6 gi|150399801|ref|YP_001323568.1| - 0.42 10.4 2.8 1.6 8.5 2.8 2.0 1 0 0 1 1 1 0 Zinc knuckle Vps36-NZF-N PF16988.5 gi|150399801|ref|YP_001323568.1| - 0.84 9.1 2.9 0.93 8.9 1.4 1.8 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain A2L_zn_ribbon PF08792.10 gi|150399801|ref|YP_001323568.1| - 1.1 9.0 4.6 2.9 7.7 4.5 1.7 1 1 1 2 2 2 0 A2L zinc ribbon domain Gar1 PF04410.14 gi|150399802|ref|YP_001323569.1| - 1.7e-06 27.9 0.2 1.9e-06 27.7 0.2 1.2 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region FMN_dh PF01070.18 gi|150399803|ref|YP_001323570.1| - 1.4e-24 86.8 0.0 1.2e-17 64.0 0.0 2.1 2 0 0 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|150399803|ref|YP_001323570.1| - 2.9e-07 29.8 5.6 0.00022 20.3 0.2 3.6 4 0 0 4 4 4 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|150399803|ref|YP_001323570.1| - 6.2e-07 28.9 0.2 2.2e-06 27.1 0.2 1.8 1 1 0 1 1 1 1 Conserved region in glutamate synthase DHO_dh PF01180.21 gi|150399803|ref|YP_001323570.1| - 0.004 16.4 1.5 0.03 13.5 0.2 2.2 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase DUF561 PF04481.12 gi|150399803|ref|YP_001323570.1| - 0.0067 15.6 0.0 0.012 14.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF561) NMO PF03060.15 gi|150399803|ref|YP_001323570.1| - 0.055 12.9 0.2 0.091 12.1 0.2 1.3 1 0 0 1 1 1 0 Nitronate monooxygenase RMMBL PF07521.12 gi|150399804|ref|YP_001323571.1| - 8e-12 44.9 0.7 1.8e-10 40.6 0.1 2.6 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|150399804|ref|YP_001323571.1| - 3.5e-09 37.0 1.6 1.5e-08 34.9 1.6 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|150399804|ref|YP_001323571.1| - 2.4e-08 33.7 0.1 5.3e-08 32.6 0.1 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PDEase_II PF02112.15 gi|150399804|ref|YP_001323571.1| - 0.0087 15.2 0.2 0.014 14.5 0.2 1.2 1 0 0 1 1 1 1 cAMP phosphodiesterases class-II polyprenyl_synt PF00348.17 gi|150399805|ref|YP_001323572.1| - 1.1e-74 250.8 0.0 1.4e-74 250.4 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase DUF5388 PF17363.2 gi|150399805|ref|YP_001323572.1| - 0.058 13.6 0.4 3 8.1 0.0 3.0 2 1 1 3 3 3 0 Family of unknown function (DUF5388) DUF2118 PF09891.9 gi|150399806|ref|YP_001323573.1| - 1.8e-44 151.3 1.8 2e-44 151.2 1.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2118) GCV_H PF01597.19 gi|150399806|ref|YP_001323573.1| - 0.022 14.7 0.1 0.064 13.2 0.0 1.7 2 0 0 2 2 2 0 Glycine cleavage H-protein RnfC_N PF13375.6 gi|150399806|ref|YP_001323573.1| - 0.099 12.6 0.0 0.28 11.1 0.0 1.7 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain Radical_SAM PF04055.21 gi|150399807|ref|YP_001323574.1| - 6.8e-25 88.4 1.4 3.3e-23 82.9 0.1 2.9 2 1 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|150399807|ref|YP_001323574.1| - 1.7e-10 41.0 0.0 3.5e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain Hexapep PF00132.24 gi|150399809|ref|YP_001323576.1| - 1.2e-17 62.8 22.0 2.3e-09 36.6 3.4 4.2 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|150399809|ref|YP_001323576.1| - 5.5e-08 32.4 16.8 5.6e-05 22.8 2.9 3.9 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|150399809|ref|YP_001323576.1| - 0.0048 15.9 2.8 0.029 13.3 2.8 2.2 1 1 0 1 1 1 1 L-fucokinase DUF4954 PF16314.5 gi|150399809|ref|YP_001323576.1| - 0.0093 14.1 4.4 0.012 13.7 4.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Bactofilin PF04519.13 gi|150399809|ref|YP_001323576.1| - 0.053 13.8 5.3 1.8 8.9 5.3 2.3 1 1 0 1 1 1 0 Polymer-forming cytoskeletal DMRL_synthase PF00885.19 gi|150399810|ref|YP_001323577.1| - 6.2e-34 116.8 0.3 6.8e-34 116.7 0.3 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase PRA-PH PF01503.17 gi|150399811|ref|YP_001323578.1| - 2e-19 69.8 0.3 2.4e-19 69.5 0.3 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG-like PF12643.7 gi|150399811|ref|YP_001323578.1| - 0.0011 19.1 1.3 0.0017 18.5 0.4 1.9 1 1 1 2 2 2 1 MazG-like family Phage_CII PF05269.11 gi|150399811|ref|YP_001323578.1| - 0.016 15.4 0.1 0.025 14.8 0.1 1.4 1 1 0 1 1 1 0 Bacteriophage CII protein MazG PF03819.17 gi|150399811|ref|YP_001323578.1| - 0.023 14.9 0.8 0.023 14.9 0.8 1.7 2 1 0 2 2 2 0 MazG nucleotide pyrophosphohydrolase domain Thg1C PF14413.6 gi|150399811|ref|YP_001323578.1| - 0.06 13.5 1.9 4.6 7.4 0.1 2.1 2 0 0 2 2 2 0 Thg1 C terminal domain DUF1389 PF07146.11 gi|150399811|ref|YP_001323578.1| - 0.061 12.6 0.0 0.079 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1389) HrcA_DNA-bdg PF03444.15 gi|150399812|ref|YP_001323579.1| - 2.3e-35 120.1 0.5 7.1e-35 118.5 0.5 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.28 gi|150399812|ref|YP_001323579.1| - 6.4e-24 84.2 4.0 3.1e-11 43.5 0.3 2.9 3 0 0 3 3 3 2 CBS domain HTH_11 PF08279.12 gi|150399812|ref|YP_001323579.1| - 8e-08 32.1 0.2 2.4e-07 30.6 0.1 1.9 2 0 0 2 2 2 1 HTH domain Rrf2 PF02082.20 gi|150399812|ref|YP_001323579.1| - 1.3e-05 25.4 0.2 3.3e-05 24.2 0.1 1.7 2 0 0 2 2 2 1 Transcriptional regulator HTH_38 PF13936.6 gi|150399812|ref|YP_001323579.1| - 0.012 15.4 0.0 0.12 12.2 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain DDRGK PF09756.9 gi|150399812|ref|YP_001323579.1| - 0.015 14.9 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain NIF3 PF01784.18 gi|150399813|ref|YP_001323580.1| - 3.7e-53 180.7 0.4 4.3e-53 180.5 0.4 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) PrmA PF06325.13 gi|150399814|ref|YP_001323581.1| - 8.5e-17 61.5 0.7 1.3e-16 60.8 0.7 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|150399814|ref|YP_001323581.1| - 2.7e-16 59.6 0.1 2.5e-15 56.4 0.1 2.0 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|150399814|ref|YP_001323581.1| - 5.3e-13 49.0 0.2 7.3e-13 48.6 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|150399814|ref|YP_001323581.1| - 3.2e-10 40.6 0.0 4.7e-10 40.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|150399814|ref|YP_001323581.1| - 1.3e-07 31.6 0.0 2.3e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 gi|150399814|ref|YP_001323581.1| - 2.2e-07 30.5 0.1 2.7e-07 30.2 0.1 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_11 PF08241.12 gi|150399814|ref|YP_001323581.1| - 7.2e-07 29.8 0.0 1.1e-06 29.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|150399814|ref|YP_001323581.1| - 4.1e-06 26.7 0.1 6.9e-06 25.9 0.1 1.3 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_15 PF09445.10 gi|150399814|ref|YP_001323581.1| - 9.4e-06 25.3 0.1 1.1e-05 25.1 0.1 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 gi|150399814|ref|YP_001323581.1| - 9.5e-06 25.4 0.0 1.5e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 gi|150399814|ref|YP_001323581.1| - 2.1e-05 24.5 0.1 3.7e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|150399814|ref|YP_001323581.1| - 3.1e-05 24.6 0.1 6.4e-05 23.6 0.1 1.7 1 1 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|150399814|ref|YP_001323581.1| - 0.00011 22.0 0.0 0.00016 21.5 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 TRM PF02005.16 gi|150399814|ref|YP_001323581.1| - 0.00026 20.3 0.2 0.00051 19.3 0.1 1.5 2 0 0 2 2 2 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_9 PF08003.11 gi|150399814|ref|YP_001323581.1| - 0.00033 19.7 0.0 0.00051 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltrans_SAM PF10672.9 gi|150399814|ref|YP_001323581.1| - 0.00097 18.4 0.1 0.0014 17.8 0.1 1.2 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase rRNA_methylase PF06962.12 gi|150399814|ref|YP_001323581.1| - 0.002 18.1 0.0 0.004 17.1 0.0 1.5 1 0 0 1 1 1 1 Putative rRNA methylase PCMT PF01135.19 gi|150399814|ref|YP_001323581.1| - 0.0032 17.3 0.0 0.0043 16.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_16 PF10294.9 gi|150399814|ref|YP_001323581.1| - 0.0072 16.1 0.1 0.013 15.2 0.0 1.5 2 0 0 2 2 2 1 Lysine methyltransferase Methyltransf_32 PF13679.6 gi|150399814|ref|YP_001323581.1| - 0.015 15.3 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DOT1 PF08123.13 gi|150399814|ref|YP_001323581.1| - 0.056 13.0 0.3 0.45 10.0 0.3 2.1 1 1 0 1 1 1 0 Histone methylation protein DOT1 CMAS PF02353.20 gi|150399814|ref|YP_001323581.1| - 0.091 12.0 0.0 0.11 11.8 0.0 1.3 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase FtsJ PF01728.19 gi|150399814|ref|YP_001323581.1| - 0.13 12.3 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase PUA PF01472.20 gi|150399815|ref|YP_001323582.1| - 8.3e-19 67.3 1.6 8.3e-19 67.3 1.6 1.9 2 0 0 2 2 2 1 PUA domain DUF1947 PF09183.10 gi|150399815|ref|YP_001323582.1| - 2.6e-08 34.0 1.2 4.9e-08 33.1 0.4 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1947) Pre-PUA PF17832.1 gi|150399815|ref|YP_001323582.1| - 0.0026 18.4 0.0 0.0053 17.4 0.0 1.6 1 1 0 1 1 1 1 Pre-PUA-like domain UPF0113 PF03657.13 gi|150399815|ref|YP_001323582.1| - 0.015 15.6 0.2 0.03 14.6 0.1 1.6 2 0 0 2 2 2 0 UPF0113 PUA domain Radical_SAM PF04055.21 gi|150399816|ref|YP_001323583.1| - 7.6e-17 62.2 0.3 1.3e-16 61.4 0.3 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Radical_SAM PF04055.21 gi|150399817|ref|YP_001323584.1| - 2.5e-13 50.8 0.1 4.2e-13 50.0 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|150399817|ref|YP_001323584.1| - 0.14 12.3 1.7 0.28 11.3 0.2 2.2 2 1 0 2 2 2 0 4Fe-4S single cluster domain Bac_luciferase PF00296.20 gi|150399818|ref|YP_001323585.1| - 9.9e-60 202.6 0.0 1.2e-59 202.3 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Arc PF03869.14 gi|150399818|ref|YP_001323585.1| - 0.17 11.8 0.1 2.1 8.3 0.0 2.3 2 0 0 2 2 2 0 Arc-like DNA binding domain DUF2666 PF10869.8 gi|150399819|ref|YP_001323586.1| - 4.1e-60 201.9 14.2 4.6e-60 201.7 14.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2666) Ribosomal_L18A PF01775.17 gi|150399820|ref|YP_001323587.1| - 5.2e-11 42.7 0.1 6.2e-11 42.5 0.1 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A eIF-6 PF01912.18 gi|150399821|ref|YP_001323588.1| - 1.1e-58 197.9 4.4 1.2e-58 197.7 4.4 1.0 1 0 0 1 1 1 1 eIF-6 family Ribosomal_L31e PF01198.19 gi|150399822|ref|YP_001323589.1| - 3.6e-16 59.1 0.8 4.4e-16 58.9 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e AA_kinase PF00696.28 gi|150399823|ref|YP_001323590.1| - 1.5e-47 162.3 4.5 1.7e-47 162.1 4.5 1.0 1 0 0 1 1 1 1 Amino acid kinase family G3P_antiterm PF04309.12 gi|150399823|ref|YP_001323590.1| - 0.0062 16.0 0.2 0.016 14.6 0.2 1.7 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator P-II PF00543.22 gi|150399824|ref|YP_001323591.1| - 6.9e-35 119.7 2.6 7.7e-35 119.6 2.6 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Ammonium_transp PF00909.21 gi|150399825|ref|YP_001323592.1| - 2.3e-103 346.0 31.7 2.8e-103 345.7 31.7 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.22 gi|150399826|ref|YP_001323593.1| - 4.4e-37 126.8 0.7 4.9e-37 126.6 0.7 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DNA_binding_1 PF01035.20 gi|150399827|ref|YP_001323594.1| - 8.7e-26 89.9 0.0 1e-25 89.6 0.0 1.1 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain DUF5124 PF17160.4 gi|150399827|ref|YP_001323594.1| - 0.0092 16.7 0.0 0.011 16.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5124) GXGXG PF01493.19 gi|150399828|ref|YP_001323595.1| - 1.4e-08 34.6 15.6 2.5e-05 23.9 7.0 2.7 2 1 0 2 2 2 2 GXGXG motif DNA_primase_S PF01896.19 gi|150399829|ref|YP_001323596.1| - 4e-05 23.7 2.0 0.0001 22.4 2.0 1.7 1 1 0 1 1 1 1 DNA primase small subunit zf-B_box PF00643.24 gi|150399829|ref|YP_001323596.1| - 0.091 12.9 0.8 0.16 12.1 0.8 1.3 1 0 0 1 1 1 0 B-box zinc finger Rota_NSP4 PF01452.16 gi|150399829|ref|YP_001323596.1| - 0.24 11.1 2.1 0.47 10.1 1.3 1.9 2 0 0 2 2 2 0 Rotavirus non structural protein Hydantoinase_A PF01968.18 gi|150399830|ref|YP_001323597.1| - 2.4e-29 102.5 0.1 8.1e-29 100.8 0.0 1.7 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|150399830|ref|YP_001323597.1| - 5.3e-05 22.0 0.3 0.0039 15.8 0.1 2.1 1 1 1 2 2 2 2 MutL protein Reprolysin_5 PF13688.6 gi|150399830|ref|YP_001323597.1| - 0.0028 17.8 3.1 0.69 10.0 0.0 2.2 2 0 0 2 2 2 2 Metallo-peptidase family M12 Hydant_A_N PF05378.13 gi|150399830|ref|YP_001323597.1| - 0.019 14.7 1.3 7.4 6.2 0.0 3.3 3 1 0 3 3 3 0 Hydantoinase/oxoprolinase N-terminal region FtsA PF14450.6 gi|150399830|ref|YP_001323597.1| - 0.069 13.6 0.6 5.3 7.5 0.0 2.9 3 1 0 3 3 3 0 Cell division protein FtsA Actin PF00022.19 gi|150399830|ref|YP_001323597.1| - 0.081 11.5 0.2 1.3 7.6 0.0 2.2 1 1 1 2 2 2 0 Actin Arginosuc_synth PF00764.19 gi|150399831|ref|YP_001323598.1| - 1.3e-176 587.6 0.2 1.5e-176 587.4 0.2 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|150399831|ref|YP_001323598.1| - 3.2e-06 26.8 0.0 1.5e-05 24.6 0.0 1.9 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|150399831|ref|YP_001323598.1| - 0.018 14.8 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase CxxCxxCC PF03692.15 gi|150399832|ref|YP_001323599.1| - 0.0016 19.1 11.3 0.19 12.4 11.3 2.3 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain Fer4 PF00037.27 gi|150399832|ref|YP_001323599.1| - 0.012 15.4 1.1 0.046 13.5 1.1 2.0 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399832|ref|YP_001323599.1| - 0.017 15.2 3.1 0.059 13.5 3.1 2.0 1 0 0 1 1 1 0 4Fe-4S binding domain CPBP PF02517.16 gi|150399833|ref|YP_001323600.1| - 4.3e-11 43.0 3.1 4.3e-11 43.0 3.1 3.2 3 2 0 3 3 3 1 CPBP intramembrane metalloprotease TRAM PF01938.20 gi|150399834|ref|YP_001323601.1| - 4.1e-17 61.9 1.3 4.8e-17 61.7 1.3 1.1 1 0 0 1 1 1 1 TRAM domain TRAM_2 PF18693.1 gi|150399834|ref|YP_001323601.1| - 0.0064 16.6 1.5 0.051 13.7 1.5 2.0 1 1 0 1 1 1 1 TRAM domain Radical_SAM PF04055.21 gi|150399835|ref|YP_001323602.1| - 1e-12 48.7 0.0 1.7e-12 48.1 0.0 1.4 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|150399835|ref|YP_001323602.1| - 1.9e-09 37.9 0.1 8.2e-09 35.9 0.0 2.0 2 1 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|150399835|ref|YP_001323602.1| - 2.7e-08 34.0 0.2 7.7e-08 32.5 0.2 1.8 1 1 0 1 1 1 1 4Fe-4S single cluster domain Pribosyltran PF00156.27 gi|150399836|ref|YP_001323603.1| - 2.2e-16 59.7 0.2 2.9e-16 59.4 0.2 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|150399836|ref|YP_001323603.1| - 0.0036 16.8 0.0 0.0048 16.4 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|150399836|ref|YP_001323603.1| - 0.038 13.5 0.0 0.06 12.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase HTH_7 PF02796.15 gi|150399836|ref|YP_001323603.1| - 0.05 13.7 0.0 0.094 12.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_11 PF08279.12 gi|150399836|ref|YP_001323603.1| - 0.057 13.4 0.0 0.22 11.5 0.0 2.0 2 0 0 2 2 2 0 HTH domain Sigma70_r4_2 PF08281.12 gi|150399836|ref|YP_001323603.1| - 0.14 11.9 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 GATase_2 PF00310.21 gi|150399837|ref|YP_001323604.1| - 3.7e-08 32.5 0.3 1.3e-06 27.4 0.3 2.2 1 1 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.6 gi|150399837|ref|YP_001323604.1| - 1.4e-06 28.6 0.0 1e-05 25.8 0.0 2.1 2 1 0 2 2 2 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|150399837|ref|YP_001323604.1| - 0.0014 18.5 0.0 0.26 11.2 0.0 2.5 2 0 0 2 2 2 2 Glutamine amidotransferase domain Glu_synthase PF01645.17 gi|150399838|ref|YP_001323605.1| - 8.1e-141 469.4 0.3 8.1e-141 469.4 0.3 1.6 2 0 0 2 2 2 1 Conserved region in glutamate synthase Glu_syn_central PF04898.14 gi|150399838|ref|YP_001323605.1| - 5e-16 59.0 0.1 3.4e-09 36.6 0.1 2.4 2 0 0 2 2 2 2 Glutamate synthase central domain FMN_dh PF01070.18 gi|150399838|ref|YP_001323605.1| - 5.1e-13 48.8 4.2 7.6e-10 38.3 1.3 3.1 3 0 0 3 3 3 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|150399838|ref|YP_001323605.1| - 2.9e-09 36.4 4.7 5.3e-08 32.2 2.5 2.9 3 0 0 3 3 3 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 gi|150399838|ref|YP_001323605.1| - 3.9e-08 33.1 2.0 3.9e-08 33.1 2.0 1.5 2 0 0 2 2 2 1 Nitronate monooxygenase Fer4 PF00037.27 gi|150399838|ref|YP_001323605.1| - 5.4e-07 29.2 20.9 0.00013 21.6 1.4 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain DHO_dh PF01180.21 gi|150399838|ref|YP_001323605.1| - 4.1e-05 23.0 3.6 0.00026 20.3 2.6 2.5 2 1 0 2 2 2 1 Dihydroorotate dehydrogenase Fer4_7 PF12838.7 gi|150399838|ref|YP_001323605.1| - 4.3e-05 24.0 17.0 0.056 14.0 1.2 3.5 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399838|ref|YP_001323605.1| - 5.8e-05 23.2 16.9 0.00049 20.2 12.0 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399838|ref|YP_001323605.1| - 7.1e-05 22.8 19.7 0.0018 18.3 12.6 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399838|ref|YP_001323605.1| - 0.00031 20.8 7.7 0.00031 20.8 7.7 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain His_biosynth PF00977.21 gi|150399838|ref|YP_001323605.1| - 0.001 18.6 0.1 0.0017 17.9 0.1 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein Fer4_8 PF13183.6 gi|150399838|ref|YP_001323605.1| - 0.014 15.8 17.9 0.77 10.2 2.3 3.5 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399838|ref|YP_001323605.1| - 0.019 15.9 16.2 0.042 14.8 3.4 3.6 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|150399838|ref|YP_001323605.1| - 0.026 14.6 21.9 0.057 13.5 1.6 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain G3P_antiterm PF04309.12 gi|150399838|ref|YP_001323605.1| - 0.049 13.1 0.6 0.12 11.8 0.1 1.8 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator IGPS PF00218.21 gi|150399838|ref|YP_001323605.1| - 0.18 11.0 0.0 0.3 10.2 0.0 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase Fer4_6 PF12837.7 gi|150399838|ref|YP_001323605.1| - 0.7 10.1 23.1 0.29 11.3 1.2 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399838|ref|YP_001323605.1| - 2.3 8.8 19.9 22 5.7 0.1 3.5 2 1 1 3 3 2 0 4Fe-4S dicluster domain GXGXG PF01493.19 gi|150399839|ref|YP_001323606.1| - 4.6e-39 134.0 4.6 6e-39 133.6 4.6 1.1 1 0 0 1 1 1 1 GXGXG motif Peptidase_C3 PF00548.20 gi|150399839|ref|YP_001323606.1| - 0.0087 16.0 0.1 0.11 12.4 0.0 2.1 2 0 0 2 2 2 1 3C cysteine protease (picornain 3C) FrhB_FdhB_C PF04432.13 gi|150399840|ref|YP_001323607.1| - 9.1e-37 126.3 0.0 5.4e-36 123.8 0.0 1.9 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|150399840|ref|YP_001323607.1| - 2.5e-22 78.8 0.1 4.2e-22 78.1 0.1 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.27 gi|150399840|ref|YP_001323607.1| - 3.2e-07 29.9 3.1 3.2e-07 29.9 3.1 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399840|ref|YP_001323607.1| - 1.9e-06 27.7 2.1 1.9e-06 27.7 2.1 3.4 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399840|ref|YP_001323607.1| - 4e-05 23.5 3.6 4e-05 23.5 3.6 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399840|ref|YP_001323607.1| - 0.00023 21.7 16.3 0.00023 21.7 16.3 2.2 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399840|ref|YP_001323607.1| - 0.00028 21.3 8.0 0.023 15.1 1.1 2.8 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399840|ref|YP_001323607.1| - 0.00058 20.7 18.2 0.00061 20.7 15.3 2.5 3 0 0 3 3 2 1 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|150399840|ref|YP_001323607.1| - 0.00073 19.9 3.0 0.00073 19.9 3.0 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399840|ref|YP_001323607.1| - 0.0018 18.3 0.9 0.0018 18.3 0.9 3.4 3 1 1 4 4 4 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399840|ref|YP_001323607.1| - 0.0038 17.3 19.0 0.0038 17.3 19.0 2.5 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399840|ref|YP_001323607.1| - 0.01 16.0 2.9 0.01 16.0 2.9 3.1 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|150399840|ref|YP_001323607.1| - 0.013 16.1 1.2 0.013 16.1 1.2 3.2 4 0 0 4 4 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|150399840|ref|YP_001323607.1| - 0.019 15.9 4.8 0.019 15.9 4.8 3.8 4 0 0 4 4 3 0 4Fe-4S binding domain AdoHcyase_NAD PF00670.21 gi|150399840|ref|YP_001323607.1| - 0.051 13.6 0.1 0.086 12.9 0.1 1.3 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Fer4_22 PF17179.4 gi|150399840|ref|YP_001323607.1| - 0.091 13.6 0.3 0.091 13.6 0.3 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399840|ref|YP_001323607.1| - 0.095 12.9 10.4 0.058 13.6 3.8 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain DisA_N PF02457.16 gi|150399840|ref|YP_001323607.1| - 0.11 12.1 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 DisA bacterial checkpoint controller nucleotide-binding N6-adenineMlase PF10237.9 gi|150399840|ref|YP_001323607.1| - 0.11 12.3 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase Fer4_17 PF13534.6 gi|150399840|ref|YP_001323607.1| - 0.17 12.4 15.6 0.27 11.8 3.1 3.1 3 1 1 4 4 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150399840|ref|YP_001323607.1| - 1.2 10.0 8.9 0.73 10.6 4.6 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain MCPsignal PF00015.21 gi|150399841|ref|YP_001323608.1| - 4.6e-32 111.2 49.8 8.5e-31 107.1 18.6 5.0 1 1 5 6 6 6 3 Methyl-accepting chemotaxis protein (MCP) signalling domain dCache_3 PF14827.6 gi|150399841|ref|YP_001323608.1| - 1.2e-25 90.5 0.2 1.2e-25 90.5 0.2 2.7 3 1 1 4 4 4 1 Double sensory domain of two-component sensor kinase sCache_3_3 PF17202.4 gi|150399841|ref|YP_001323608.1| - 3.3e-21 75.7 0.6 3.3e-21 75.7 0.6 3.2 3 0 0 3 3 2 1 Single cache domain 3 Cache_3-Cache_2 PF17201.4 gi|150399841|ref|YP_001323608.1| - 2.5e-14 53.3 2.1 2.5e-14 53.3 2.1 3.9 2 1 0 3 3 3 1 Cache 3/Cache 2 fusion domain HAMP PF00672.25 gi|150399841|ref|YP_001323608.1| - 4.2e-13 49.5 0.0 1e-08 35.4 0.0 3.9 3 0 0 3 3 3 2 HAMP domain sCache_3_2 PF17203.4 gi|150399841|ref|YP_001323608.1| - 1.6e-08 34.8 13.1 7.3e-05 22.9 0.3 4.3 4 1 1 5 5 5 2 Single cache domain 3 DUF948 PF06103.11 gi|150399841|ref|YP_001323608.1| - 1.8e-07 31.3 37.5 0.078 13.2 2.3 6.3 3 2 3 6 6 6 5 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 gi|150399841|ref|YP_001323608.1| - 0.00084 19.4 34.4 0.013 15.5 1.0 5.7 3 1 1 4 4 4 2 Protein of unknown function (DUF1664) Laminin_II PF06009.12 gi|150399841|ref|YP_001323608.1| - 0.0046 17.0 4.6 0.0046 17.0 4.6 5.0 3 2 2 5 5 5 2 Laminin Domain II Fib_alpha PF08702.10 gi|150399841|ref|YP_001323608.1| - 0.012 15.8 8.4 0.012 15.8 8.4 5.0 2 2 3 5 5 5 0 Fibrinogen alpha/beta chain family DUF2239 PF09998.9 gi|150399841|ref|YP_001323608.1| - 0.045 13.5 0.0 0.096 12.5 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) DASH_Dad1 PF08649.10 gi|150399841|ref|YP_001323608.1| - 0.14 12.4 0.3 0.14 12.4 0.3 5.5 6 0 0 6 6 5 0 DASH complex subunit Dad1 Laminin_I PF06008.14 gi|150399841|ref|YP_001323608.1| - 0.15 11.7 36.4 0.74 9.5 0.7 4.2 1 1 3 4 4 4 0 Laminin Domain I DUF2524 PF10732.9 gi|150399841|ref|YP_001323608.1| - 0.31 11.4 4.7 3 8.2 0.0 3.6 3 0 0 3 3 2 0 Protein of unknown function (DUF2524) Spc7 PF08317.11 gi|150399841|ref|YP_001323608.1| - 0.37 9.6 31.8 0.11 11.4 3.7 3.3 1 1 3 4 4 4 0 Spc7 kinetochore protein ROS_MUCR PF05443.11 gi|150399841|ref|YP_001323608.1| - 0.41 10.7 14.2 0.41 10.7 0.9 3.8 3 1 0 3 3 3 0 ROS/MUCR transcriptional regulator protein DUF3158 PF11358.8 gi|150399841|ref|YP_001323608.1| - 0.42 10.3 3.0 0.44 10.3 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3158) SlyX PF04102.12 gi|150399841|ref|YP_001323608.1| - 1.1 9.9 8.6 3.5 8.3 0.3 4.1 5 1 0 5 5 3 0 SlyX WXG100 PF06013.12 gi|150399841|ref|YP_001323608.1| - 1.1 9.5 17.6 16 5.8 0.1 5.6 3 1 1 5 5 5 0 Proteins of 100 residues with WXG EzrA PF06160.12 gi|150399841|ref|YP_001323608.1| - 1.1 7.3 35.5 46 2.0 35.5 3.1 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA CK2S PF15011.6 gi|150399841|ref|YP_001323608.1| - 2.2 8.1 7.0 6.5 6.6 0.0 3.7 3 1 0 3 3 3 0 Casein Kinase 2 substrate BLOC1_2 PF10046.9 gi|150399841|ref|YP_001323608.1| - 2.3 8.6 33.0 0.89 9.9 2.6 6.1 2 2 1 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 gi|150399841|ref|YP_001323608.1| - 2.5 8.6 33.1 4.1 7.9 1.0 6.0 3 1 2 5 5 5 0 Protein of unknown function DUF16 Mod_r PF07200.13 gi|150399841|ref|YP_001323608.1| - 2.7 8.1 22.3 0.36 10.9 0.9 3.8 3 1 0 4 4 3 0 Modifier of rudimentary (Mod(r)) protein DUF4635 PF15466.6 gi|150399841|ref|YP_001323608.1| - 3.6 7.1 5.8 1.3 8.5 0.5 2.7 3 1 0 3 3 2 0 Domain of unknown function (DUF4635) PE PF00934.20 gi|150399841|ref|YP_001323608.1| - 3.9 7.9 12.0 1 9.7 3.4 3.5 3 0 0 3 3 3 0 PE family Occludin_ELL PF07303.13 gi|150399841|ref|YP_001323608.1| - 4.4 8.1 14.6 15 6.4 0.4 5.2 4 1 2 6 6 6 0 Occludin homology domain ATG16 PF08614.11 gi|150399841|ref|YP_001323608.1| - 5.3 7.2 24.3 5.8 7.1 1.2 3.6 2 1 2 4 4 4 0 Autophagy protein 16 (ATG16) CHDCT2 PF08074.11 gi|150399841|ref|YP_001323608.1| - 8.7 6.5 14.5 3 8.0 3.0 3.5 2 1 2 4 4 4 0 CHDCT2 (NUC038) domain eRF1_1 PF03463.15 gi|150399842|ref|YP_001323609.1| - 3.8e-29 101.3 0.4 6.9e-29 100.5 0.4 1.5 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|150399842|ref|YP_001323609.1| - 2.9e-23 82.5 0.2 1e-22 80.7 0.1 2.0 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|150399842|ref|YP_001323609.1| - 5.9e-07 29.9 0.1 3.4e-06 27.4 0.1 2.1 1 1 0 1 1 1 1 eRF1 domain 2 Sec7 PF01369.20 gi|150399842|ref|YP_001323609.1| - 0.01 15.5 0.1 0.019 14.7 0.1 1.4 1 0 0 1 1 1 0 Sec7 domain DREPP PF05558.12 gi|150399842|ref|YP_001323609.1| - 0.11 12.3 0.7 0.23 11.3 0.7 1.6 1 1 0 1 1 1 0 DREPP plasma membrane polypeptide PTPS_related PF10131.9 gi|150399842|ref|YP_001323609.1| - 0.13 10.6 0.1 3.1 6.0 0.0 2.3 2 1 0 2 2 2 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein TFX_C PF14601.6 gi|150399843|ref|YP_001323610.1| - 1.9e-28 98.2 0.4 2.8e-28 97.7 0.4 1.3 1 0 0 1 1 1 1 DNA_binding protein, TFX, C-term Sigma70_r4 PF04545.16 gi|150399843|ref|YP_001323610.1| - 1.3e-06 27.9 0.4 2e-06 27.2 0.4 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|150399843|ref|YP_001323610.1| - 0.0011 19.0 0.1 0.0021 18.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|150399843|ref|YP_001323610.1| - 0.0024 17.9 0.4 0.0044 17.0 0.4 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|150399843|ref|YP_001323610.1| - 0.0033 17.5 0.1 0.0052 16.9 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DUF915 PF06028.11 gi|150399843|ref|YP_001323610.1| - 0.0059 16.0 0.2 0.0071 15.7 0.2 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF915) DUF3536 PF12055.8 gi|150399843|ref|YP_001323610.1| - 0.013 14.8 0.2 0.023 14.0 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3536) Trp_repressor PF01371.19 gi|150399843|ref|YP_001323610.1| - 0.013 15.6 0.5 0.026 14.7 0.5 1.5 1 0 0 1 1 1 0 Trp repressor protein HTH_38 PF13936.6 gi|150399843|ref|YP_001323610.1| - 0.029 14.1 0.1 0.06 13.1 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain GerE PF00196.19 gi|150399843|ref|YP_001323610.1| - 0.036 13.6 0.5 0.06 12.9 0.5 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Cupredoxin_1 PF13473.6 gi|150399843|ref|YP_001323610.1| - 0.039 14.1 0.9 0.068 13.3 0.7 1.6 1 1 0 1 1 1 0 Cupredoxin-like domain Thiolase_N PF00108.23 gi|150399843|ref|YP_001323610.1| - 0.047 13.0 0.1 0.059 12.7 0.1 1.1 1 0 0 1 1 1 0 Thiolase, N-terminal domain KORA PF16509.5 gi|150399843|ref|YP_001323610.1| - 0.048 13.9 0.1 0.074 13.3 0.1 1.3 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor Sigma70_r4_2 PF08281.12 gi|150399843|ref|YP_001323610.1| - 0.052 13.2 0.0 0.1 12.3 0.0 1.5 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_29 PF13551.6 gi|150399843|ref|YP_001323610.1| - 0.071 13.1 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Crp_2 PF13545.6 gi|150399843|ref|YP_001323610.1| - 0.084 12.9 0.0 0.19 11.7 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HMG-CoA_red PF00368.18 gi|150399844|ref|YP_001323611.1| - 1.1e-131 439.2 2.3 1.3e-131 439.0 2.3 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Arteri_GP4 PF02497.15 gi|150399844|ref|YP_001323611.1| - 0.054 13.6 0.1 0.15 12.2 0.0 1.8 2 0 0 2 2 2 0 Arterivirus glycoprotein Shikimate_DH PF01488.20 gi|150399845|ref|YP_001323612.1| - 2.7e-42 144.1 1.3 5.1e-42 143.2 1.3 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_N PF05201.15 gi|150399845|ref|YP_001323612.1| - 2.1e-31 108.7 0.0 5.5e-31 107.3 0.0 1.7 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.20 gi|150399845|ref|YP_001323612.1| - 5.9e-11 42.7 0.3 5.9e-11 42.7 0.3 2.3 3 0 0 3 3 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.17 gi|150399845|ref|YP_001323612.1| - 1.4e-09 38.4 0.4 3.5e-09 37.1 0.4 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|150399845|ref|YP_001323612.1| - 6.5e-06 25.6 0.1 1.1e-05 24.9 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|150399845|ref|YP_001323612.1| - 2.2e-05 24.8 0.7 4.1e-05 24.0 0.1 1.8 2 0 0 2 2 2 1 Putative NAD(P)-binding TrkA_N PF02254.18 gi|150399845|ref|YP_001323612.1| - 0.00027 21.2 0.3 0.00076 19.7 0.3 1.8 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_2 PF03446.15 gi|150399845|ref|YP_001323612.1| - 0.00037 20.7 0.1 0.0018 18.5 0.0 2.1 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|150399845|ref|YP_001323612.1| - 0.00043 20.5 0.2 0.001 19.3 0.2 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain OCD_Mu_crystall PF02423.15 gi|150399845|ref|YP_001323612.1| - 0.0025 16.8 0.1 0.004 16.1 0.1 1.4 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family GFO_IDH_MocA PF01408.22 gi|150399845|ref|YP_001323612.1| - 0.0031 18.3 0.1 0.0061 17.4 0.1 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold FliG_C PF01706.16 gi|150399845|ref|YP_001323612.1| - 0.011 15.9 2.1 4.5 7.5 0.1 3.2 2 1 0 3 3 3 0 FliG C-terminal domain IlvN PF07991.12 gi|150399845|ref|YP_001323612.1| - 0.02 14.4 0.0 0.047 13.3 0.0 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_10 PF13460.6 gi|150399845|ref|YP_001323612.1| - 0.025 14.4 0.0 0.043 13.7 0.0 1.4 1 0 0 1 1 1 0 NAD(P)H-binding Gp_dh_N PF00044.24 gi|150399845|ref|YP_001323612.1| - 0.026 14.9 0.1 0.07 13.5 0.1 1.8 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain adh_short PF00106.25 gi|150399845|ref|YP_001323612.1| - 0.03 13.8 0.3 0.063 12.7 0.3 1.5 1 0 0 1 1 1 0 short chain dehydrogenase IL22 PF14565.6 gi|150399845|ref|YP_001323612.1| - 0.035 14.4 0.9 0.067 13.5 0.4 1.7 2 0 0 2 2 1 0 Interleukin 22 IL-10-related T-cell-derived-inducible factor ApbA PF02558.16 gi|150399845|ref|YP_001323612.1| - 0.049 13.3 0.0 0.085 12.5 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA ThiF PF00899.21 gi|150399845|ref|YP_001323612.1| - 0.088 12.2 0.3 0.17 11.2 0.3 1.4 1 0 0 1 1 1 0 ThiF family COQ7 PF03232.13 gi|150399845|ref|YP_001323612.1| - 0.095 12.5 0.1 0.26 11.1 0.1 1.7 1 0 0 1 1 1 0 Ubiquinone biosynthesis protein COQ7 KR PF08659.10 gi|150399845|ref|YP_001323612.1| - 0.13 12.2 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 KR domain AbiH PF14253.6 gi|150399845|ref|YP_001323612.1| - 0.44 10.4 7.7 0.27 11.1 1.4 2.6 2 1 0 2 2 2 0 Bacteriophage abortive infection AbiH NAD_binding_7 PF13241.6 gi|150399846|ref|YP_001323613.1| - 6.7e-20 71.5 0.2 1.8e-19 70.1 0.1 1.7 2 0 0 2 2 2 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|150399846|ref|YP_001323613.1| - 2e-05 24.7 0.0 3.6e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|150399846|ref|YP_001323613.1| - 6.2e-05 23.3 0.0 0.00016 21.9 0.0 1.6 1 1 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|150399846|ref|YP_001323613.1| - 0.0013 18.1 0.0 0.0022 17.4 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sirohm_synth_M PF14824.6 gi|150399846|ref|YP_001323613.1| - 0.012 15.1 0.4 0.036 13.5 0.0 2.0 3 0 0 3 3 3 0 Sirohaem biosynthesis protein central ThiF PF00899.21 gi|150399846|ref|YP_001323613.1| - 0.015 14.6 1.3 0.033 13.5 0.2 1.9 1 1 1 2 2 2 0 ThiF family AlaDh_PNT_C PF01262.21 gi|150399846|ref|YP_001323613.1| - 0.021 14.1 0.0 0.06 12.6 0.0 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain RGS PF00615.19 gi|150399846|ref|YP_001323613.1| - 0.043 14.1 5.9 0.51 10.6 5.9 2.6 1 1 0 1 1 1 0 Regulator of G protein signaling domain ELFV_dehydrog PF00208.21 gi|150399846|ref|YP_001323613.1| - 0.045 13.5 0.1 0.16 11.6 0.1 2.0 1 1 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 2-Hacid_dh PF00389.30 gi|150399846|ref|YP_001323613.1| - 0.051 13.2 0.9 0.18 11.5 0.1 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Gly_radical PF01228.21 gi|150399846|ref|YP_001323613.1| - 0.22 12.1 1.1 0.92 10.1 0.2 2.2 2 1 0 2 2 2 0 Glycine radical Glycos_transf_1 PF00534.20 gi|150399847|ref|YP_001323614.1| - 9e-33 113.2 0.0 1.4e-32 112.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|150399847|ref|YP_001323614.1| - 3e-27 95.7 0.0 4.5e-27 95.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|150399847|ref|YP_001323614.1| - 6.3e-21 75.1 0.0 8.3e-21 74.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|150399847|ref|YP_001323614.1| - 2.7e-12 46.9 0.1 5.6e-12 45.9 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.6 gi|150399847|ref|YP_001323614.1| - 1.5e-05 25.5 0.0 2e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|150399847|ref|YP_001323614.1| - 3.1e-05 24.3 0.0 6.2e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF3492 PF11997.8 gi|150399847|ref|YP_001323614.1| - 0.1 12.3 1.1 12 5.5 0.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF3492) DUF1413 PF07205.11 gi|150399847|ref|YP_001323614.1| - 9.2 6.4 7.9 4.8 7.3 0.1 3.4 3 1 0 3 3 3 0 Domain of unknown function (DUF1413) DUF655 PF04919.12 gi|150399848|ref|YP_001323615.1| - 2.3e-58 197.1 2.8 2.6e-58 196.9 2.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|150399848|ref|YP_001323615.1| - 0.0048 17.1 0.0 0.0093 16.2 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif TINF2_N PF14973.6 gi|150399848|ref|YP_001323615.1| - 0.034 14.5 0.6 4.4 7.7 0.1 2.2 2 0 0 2 2 2 0 TERF1-interacting nuclear factor 2 N-terminus Ribosomal_S13 PF00416.22 gi|150399848|ref|YP_001323615.1| - 0.034 14.5 0.0 0.071 13.5 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S13/S18 GP24_25 PF17388.2 gi|150399848|ref|YP_001323615.1| - 0.14 12.1 0.8 1.2 9.1 0.1 2.1 2 0 0 2 2 2 0 Tail assembly gene products 24 & 25 RNA_pol_Rpb4 PF03874.16 gi|150399849|ref|YP_001323616.1| - 5.9e-07 29.9 0.4 6.9e-07 29.6 0.4 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb4 DUF4473 PF14747.6 gi|150399849|ref|YP_001323616.1| - 0.022 15.3 0.0 0.037 14.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) KaiB PF07689.12 gi|150399849|ref|YP_001323616.1| - 0.025 14.3 0.0 0.054 13.2 0.0 1.5 1 0 0 1 1 1 0 KaiB domain PhetRS_B1 PF18262.1 gi|150399849|ref|YP_001323616.1| - 0.11 12.7 0.5 0.83 9.9 0.5 2.0 1 1 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain Ribosomal_L21e PF01157.18 gi|150399850|ref|YP_001323617.1| - 6.1e-39 132.0 0.9 6.6e-39 131.8 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e THUMP PF02926.17 gi|150399851|ref|YP_001323618.1| - 7.9e-11 42.2 1.4 1.8e-10 41.1 1.4 1.7 1 0 0 1 1 1 1 THUMP domain DUF2703 PF10865.8 gi|150399851|ref|YP_001323618.1| - 0.0099 16.1 0.5 0.3 11.3 0.5 2.6 1 1 0 1 1 1 1 Domain of unknown function (DUF2703) Mu-like_Com PF10122.9 gi|150399851|ref|YP_001323618.1| - 0.019 14.4 0.0 0.61 9.6 0.1 2.4 2 0 0 2 2 2 0 Mu-like prophage protein Com PHP_C PF13263.6 gi|150399852|ref|YP_001323619.1| - 0.0096 15.7 0.0 0.06 13.1 0.0 2.2 2 0 0 2 2 2 1 PHP-associated HypA PF01155.19 gi|150399852|ref|YP_001323619.1| - 0.043 13.8 0.2 0.086 12.9 0.2 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-4CXXC_R1 PF10497.9 gi|150399852|ref|YP_001323619.1| - 0.08 13.2 0.1 0.27 11.5 0.1 1.8 2 0 0 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 zf-C3HC4_4 PF15227.6 gi|150399852|ref|YP_001323619.1| - 0.085 13.0 2.1 0.16 12.1 2.1 1.4 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING TF_Zn_Ribbon PF08271.12 gi|150399852|ref|YP_001323619.1| - 0.091 12.3 1.0 0.19 11.3 1.0 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding zf-C3HC4_3 PF13920.6 gi|150399852|ref|YP_001323619.1| - 0.099 12.5 0.7 0.17 11.8 0.7 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_4 PF13717.6 gi|150399852|ref|YP_001323619.1| - 0.12 12.3 2.5 0.23 11.4 2.5 1.5 1 0 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|150399852|ref|YP_001323619.1| - 0.19 11.9 1.2 0.36 11.0 1.2 1.5 1 0 0 1 1 1 0 Zinc ribbon domain Aminotran_1_2 PF00155.21 gi|150399853|ref|YP_001323620.1| - 7.3e-39 134.0 0.0 8.9e-39 133.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|150399853|ref|YP_001323620.1| - 9.7e-06 24.6 0.0 3.1e-05 23.0 0.0 1.8 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase DUF2334 PF10096.9 gi|150399853|ref|YP_001323620.1| - 0.011 15.4 0.1 0.025 14.2 0.1 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Cys_Met_Meta_PP PF01053.20 gi|150399853|ref|YP_001323620.1| - 0.023 13.3 0.0 0.031 12.8 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme HTH_3 PF01381.22 gi|150399854|ref|YP_001323621.1| - 9.1e-15 54.5 0.3 1.4e-14 53.9 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix Cupin_2 PF07883.11 gi|150399854|ref|YP_001323621.1| - 1.4e-11 43.9 0.0 1.9e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 Cupin domain HTH_19 PF12844.7 gi|150399854|ref|YP_001323621.1| - 2e-09 37.3 0.3 3.8e-09 36.4 0.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|150399854|ref|YP_001323621.1| - 4.4e-07 30.2 0.0 6.9e-07 29.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|150399854|ref|YP_001323621.1| - 9.1e-06 25.4 0.0 2.1e-05 24.3 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|150399854|ref|YP_001323621.1| - 0.0014 19.0 0.2 0.0025 18.2 0.2 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain MannoseP_isomer PF01050.18 gi|150399854|ref|YP_001323621.1| - 0.0087 16.0 0.1 0.014 15.3 0.1 1.2 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 gi|150399854|ref|YP_001323621.1| - 0.12 12.2 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain Fer4 PF00037.27 gi|150399855|ref|YP_001323622.1| - 1.5e-16 59.4 23.1 3.4e-09 36.2 5.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399855|ref|YP_001323622.1| - 1.2e-10 41.0 22.4 1.8e-06 27.8 8.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150399855|ref|YP_001323622.1| - 1.4e-10 40.6 13.8 1.9e-05 24.4 3.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399855|ref|YP_001323622.1| - 1.6e-10 40.9 29.1 1.1e-07 31.8 15.2 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399855|ref|YP_001323622.1| - 1.9e-09 37.6 14.7 2.5e-09 37.2 14.7 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399855|ref|YP_001323622.1| - 1.9e-09 37.9 15.2 3.2e-09 37.3 15.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399855|ref|YP_001323622.1| - 3.6e-09 36.6 18.6 7.8e-09 35.5 18.5 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399855|ref|YP_001323622.1| - 1.3e-08 35.6 17.6 3.4e-05 24.7 4.2 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|150399855|ref|YP_001323622.1| - 8.4e-07 29.0 14.2 0.00031 21.0 2.6 2.7 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|150399855|ref|YP_001323622.1| - 5.2e-05 23.6 15.6 0.024 15.1 15.6 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399855|ref|YP_001323622.1| - 9.9e-05 23.0 23.0 0.008 17.0 7.0 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399855|ref|YP_001323622.1| - 0.00011 22.6 14.6 0.01 16.3 2.1 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|150399855|ref|YP_001323622.1| - 0.00091 19.9 2.4 0.00091 19.9 2.4 2.8 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|150399855|ref|YP_001323622.1| - 0.021 15.4 24.5 0.62 10.6 8.0 3.3 2 2 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|150399855|ref|YP_001323622.1| - 0.033 14.4 17.1 0.19 12.0 15.0 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150399855|ref|YP_001323622.1| - 0.23 12.3 13.9 1.6 9.6 3.1 2.1 1 1 2 3 3 3 0 4Fe-4S dicluster domain HCV_NS2 PF01538.18 gi|150399855|ref|YP_001323622.1| - 3.2 7.4 11.0 0.51 10.0 1.3 2.0 1 1 1 2 2 2 0 Hepatitis C virus non-structural protein NS2 MFS_1 PF07690.16 gi|150399856|ref|YP_001323623.1| - 1.1e-65 221.9 66.7 3e-53 181.0 38.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|150399856|ref|YP_001323623.1| - 6.1e-11 41.4 15.8 7.9e-11 41.0 15.8 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_1_like PF12832.7 gi|150399856|ref|YP_001323623.1| - 8.5e-11 41.3 33.8 3.5e-08 32.7 16.0 2.1 1 1 1 2 2 2 2 MFS_1 like family Sugar_tr PF00083.24 gi|150399856|ref|YP_001323623.1| - 2e-10 40.1 37.2 8.1e-10 38.1 15.8 2.7 1 1 1 2 2 2 2 Sugar (and other) transporter OATP PF03137.20 gi|150399856|ref|YP_001323623.1| - 0.038 12.3 22.8 0.013 13.8 3.1 3.4 2 1 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family PCMT PF01135.19 gi|150399857|ref|YP_001323624.1| - 5.8e-68 228.8 0.1 6.6e-68 228.6 0.1 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|150399857|ref|YP_001323624.1| - 2.7e-07 30.5 0.0 3.7e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|150399857|ref|YP_001323624.1| - 2.7e-05 23.4 0.0 4.2e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|150399857|ref|YP_001323624.1| - 6.7e-05 23.5 0.0 0.00011 22.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|150399857|ref|YP_001323624.1| - 0.00035 20.0 0.0 0.00049 19.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_3 PF01596.17 gi|150399857|ref|YP_001323624.1| - 0.00081 18.6 0.0 0.0011 18.2 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_23 PF13489.6 gi|150399857|ref|YP_001323624.1| - 0.0013 18.6 0.0 0.003 17.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|150399857|ref|YP_001323624.1| - 0.0019 17.8 0.0 0.0028 17.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltr_RsmB-F PF01189.17 gi|150399857|ref|YP_001323624.1| - 0.0022 17.7 0.0 0.0032 17.2 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F GCD14 PF08704.10 gi|150399857|ref|YP_001323624.1| - 0.0022 17.7 0.0 0.0029 17.3 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit GidB PF02527.15 gi|150399857|ref|YP_001323624.1| - 0.023 14.0 0.0 0.031 13.6 0.0 1.2 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Fibrillarin PF01269.17 gi|150399857|ref|YP_001323624.1| - 0.035 13.2 0.1 0.051 12.7 0.1 1.2 1 0 0 1 1 1 0 Fibrillarin CMAS PF02353.20 gi|150399857|ref|YP_001323624.1| - 0.04 13.2 0.0 0.059 12.6 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DUF938 PF06080.12 gi|150399857|ref|YP_001323624.1| - 0.043 13.6 0.0 0.064 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF938) SOR_SNZ PF01680.17 gi|150399858|ref|YP_001323625.1| - 1.7e-101 338.3 11.6 2.5e-101 337.7 11.6 1.3 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|150399858|ref|YP_001323625.1| - 4e-09 36.2 5.6 3.8e-06 26.4 0.3 2.4 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|150399858|ref|YP_001323625.1| - 7.3e-07 28.6 1.1 0.0056 15.8 0.0 2.2 1 1 0 2 2 2 2 Dihydrouridine synthase (Dus) NanE PF04131.14 gi|150399858|ref|YP_001323625.1| - 0.00023 20.4 2.4 0.051 12.8 0.2 2.5 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 gi|150399858|ref|YP_001323625.1| - 0.0015 18.0 1.7 0.28 10.6 0.1 3.2 2 1 0 2 2 2 1 Histidine biosynthesis protein IGPS PF00218.21 gi|150399858|ref|YP_001323625.1| - 0.0023 17.1 0.3 0.13 11.4 0.0 2.4 2 1 0 2 2 2 1 Indole-3-glycerol phosphate synthase NMO PF03060.15 gi|150399858|ref|YP_001323625.1| - 0.0053 16.2 9.5 0.0087 15.5 1.2 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase IMPDH PF00478.25 gi|150399858|ref|YP_001323625.1| - 0.011 14.8 1.1 0.022 13.8 1.0 1.6 1 1 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain TetR_C_27 PF17935.1 gi|150399858|ref|YP_001323625.1| - 0.021 14.9 0.0 0.074 13.1 0.0 1.9 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain FMN_dh PF01070.18 gi|150399858|ref|YP_001323625.1| - 0.066 12.2 2.1 0.076 12.0 0.0 2.0 2 1 0 2 2 2 0 FMN-dependent dehydrogenase Fer4 PF00037.27 gi|150399859|ref|YP_001323626.1| - 3.7e-22 77.2 59.7 6.2e-05 22.6 6.9 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399859|ref|YP_001323626.1| - 4.4e-17 62.0 44.5 6.8e-05 23.0 8.8 4.9 3 2 3 6 6 6 6 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399859|ref|YP_001323626.1| - 2.4e-16 60.0 44.8 6.8e-06 26.6 7.3 4.8 2 1 3 5 5 5 5 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399859|ref|YP_001323626.1| - 3.3e-15 55.9 51.0 6.5e-08 32.6 8.1 4.2 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399859|ref|YP_001323626.1| - 2.4e-14 54.0 48.1 0.0026 18.6 4.1 6.1 3 2 3 6 6 6 6 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|150399859|ref|YP_001323626.1| - 1.1e-09 37.9 62.5 0.0048 16.9 2.1 6.2 6 0 0 6 6 6 5 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399859|ref|YP_001323626.1| - 1.9e-09 37.5 55.0 0.0042 17.2 4.4 4.6 2 1 3 5 5 5 5 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399859|ref|YP_001323626.1| - 2.4e-08 33.6 55.7 0.00057 19.8 2.2 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399859|ref|YP_001323626.1| - 2.8e-07 31.0 47.8 0.00058 20.3 0.4 6.0 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399859|ref|YP_001323626.1| - 7.7e-07 29.5 47.8 0.015 15.7 1.7 6.1 3 1 3 6 6 6 5 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399859|ref|YP_001323626.1| - 4e-05 23.8 48.4 0.00012 22.2 12.9 4.1 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399859|ref|YP_001323626.1| - 0.00032 21.4 64.5 0.39 11.8 9.4 6.3 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_4 PF12800.7 gi|150399859|ref|YP_001323626.1| - 0.001 19.4 58.1 0.48 11.1 4.2 6.2 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_15 PF13459.6 gi|150399859|ref|YP_001323626.1| - 0.42 11.4 39.9 2 9.2 0.2 6.2 6 0 0 6 6 6 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|150399859|ref|YP_001323626.1| - 2.2 8.9 51.5 0.61 10.7 2.9 6.1 6 0 0 6 6 6 0 4Fe-4S single cluster domain of Ferredoxin I ECF_trnsprt PF12822.7 gi|150399860|ref|YP_001323627.1| - 5.2e-06 26.7 25.0 1.2e-05 25.5 25.0 1.6 1 1 0 1 1 1 1 ECF transporter, substrate-specific component CbiM PF01891.16 gi|150399860|ref|YP_001323627.1| - 0.00021 21.2 12.5 0.00028 20.8 12.5 1.4 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region ECF-ribofla_trS PF07155.12 gi|150399860|ref|YP_001323627.1| - 0.00025 21.1 16.8 0.00076 19.5 16.9 1.8 1 1 0 1 1 1 1 ECF-type riboflavin transporter, S component 5TM-5TMR_LYT PF07694.12 gi|150399860|ref|YP_001323627.1| - 0.12 11.9 15.8 0.087 12.3 14.3 1.5 1 1 0 1 1 1 0 5TMR of 5TMR-LYT DUF2628 PF10947.8 gi|150399860|ref|YP_001323627.1| - 3.6 8.0 12.7 5.1 7.5 1.4 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2628) Zn_dep_PLPC PF00882.18 gi|150399861|ref|YP_001323628.1| - 5.6e-06 26.5 0.8 9.5e-06 25.7 0.8 1.6 1 1 0 1 1 1 1 Zinc dependent phospholipase C Metalloenzyme PF01676.18 gi|150399862|ref|YP_001323629.1| - 8.7e-34 117.0 0.0 1e-33 116.7 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily PhosphMutase PF10143.9 gi|150399862|ref|YP_001323629.1| - 3.9e-33 114.7 0.0 6e-33 114.1 0.0 1.3 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Alk_phosphatase PF00245.20 gi|150399862|ref|YP_001323629.1| - 0.0015 17.6 0.0 0.0023 16.9 0.0 1.2 1 0 0 1 1 1 1 Alkaline phosphatase Phosphodiest PF01663.22 gi|150399862|ref|YP_001323629.1| - 0.0034 17.0 0.0 0.013 15.1 0.0 1.9 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Flp1_like PF16982.5 gi|150399862|ref|YP_001323629.1| - 0.16 11.4 0.1 0.41 10.1 0.1 1.7 1 0 0 1 1 1 0 Putative Flagellin, Flp1-like, domain AP_endonuc_2 PF01261.24 gi|150399864|ref|YP_001323631.1| - 5.3e-08 32.6 0.0 8e-08 32.0 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel NIF PF03031.18 gi|150399864|ref|YP_001323631.1| - 0.019 14.8 0.2 0.099 12.4 0.2 2.1 1 1 0 1 1 1 0 NLI interacting factor-like phosphatase Nitroreductase PF00881.24 gi|150399865|ref|YP_001323632.1| - 1.5e-24 87.0 0.1 9.2e-13 48.6 0.0 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|150399865|ref|YP_001323632.1| - 3.4e-12 46.4 0.2 0.0032 17.1 0.0 3.1 2 1 1 3 3 3 3 Putative TM nitroreductase Semialdhyde_dh PF01118.24 gi|150399866|ref|YP_001323633.1| - 1.8e-34 118.7 0.0 2.9e-34 118.1 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|150399866|ref|YP_001323633.1| - 1.1e-26 94.0 0.0 1.8e-26 93.4 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Sacchrp_dh_NADP PF03435.18 gi|150399866|ref|YP_001323633.1| - 0.0019 18.5 0.0 0.0043 17.3 0.0 1.5 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 gi|150399866|ref|YP_001323633.1| - 0.03 14.4 0.0 0.065 13.4 0.0 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus NAD_binding_10 PF13460.6 gi|150399866|ref|YP_001323633.1| - 0.086 12.7 0.0 0.62 9.9 0.0 2.2 3 0 0 3 3 3 0 NAD(P)H-binding CofC PF01983.16 gi|150399867|ref|YP_001323634.1| - 2.8e-64 216.3 2.0 3.3e-64 216.0 2.0 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|150399867|ref|YP_001323634.1| - 1.9e-08 34.8 0.0 2.7e-08 34.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.9 gi|150399867|ref|YP_001323634.1| - 0.079 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2064) Spuma_A9PTase PF03539.14 gi|150399867|ref|YP_001323634.1| - 0.1 12.7 0.1 0.23 11.6 0.0 1.6 2 0 0 2 2 2 0 Spumavirus aspartic protease (A9) Lactamase_B PF00753.27 gi|150399868|ref|YP_001323635.1| - 1e-23 84.4 0.1 1.3e-23 84.0 0.1 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|150399868|ref|YP_001323635.1| - 3.7e-05 23.3 0.0 6.3e-05 22.6 0.0 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|150399868|ref|YP_001323635.1| - 0.0024 17.8 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain BPL_LplA_LipB PF03099.19 gi|150399869|ref|YP_001323636.1| - 1.1e-15 57.7 0.0 1.7e-15 57.1 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.17 gi|150399869|ref|YP_001323636.1| - 0.0078 16.1 0.0 0.013 15.4 0.0 1.4 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain tRNA_anti-codon PF01336.25 gi|150399870|ref|YP_001323637.1| - 2.3e-09 37.1 0.2 2.4e-07 30.6 0.1 2.1 2 0 0 2 2 2 2 OB-fold nucleic acid binding domain RMI2 PF16100.5 gi|150399870|ref|YP_001323637.1| - 0.00035 20.4 0.0 0.00039 20.3 0.0 1.2 1 0 0 1 1 1 1 RecQ-mediated genome instability protein 2 DUF3391 PF11871.8 gi|150399870|ref|YP_001323637.1| - 0.16 12.5 0.0 0.22 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) Cas_Cas1 PF01867.16 gi|150399871|ref|YP_001323638.1| - 0.064 12.4 0.1 0.073 12.2 0.1 1.1 1 0 0 1 1 1 0 CRISPR associated protein Cas1 Rep_fac-A_C PF08646.10 gi|150399872|ref|YP_001323639.1| - 1.9e-05 24.5 2.8 7.1e-05 22.6 2.5 1.9 2 0 0 2 2 2 1 Replication factor-A C terminal domain tRNA_anti-codon PF01336.25 gi|150399872|ref|YP_001323639.1| - 0.00032 20.6 0.4 0.33 11.0 0.0 2.6 2 0 0 2 2 2 2 OB-fold nucleic acid binding domain DUF4524 PF15025.6 gi|150399872|ref|YP_001323639.1| - 0.061 13.1 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4524) ISP3_C PF18045.1 gi|150399872|ref|YP_001323639.1| - 0.086 12.7 1.4 0.2 11.6 0.1 2.1 2 0 0 2 2 2 0 ISP3 C-terminal RWD PF05773.22 gi|150399872|ref|YP_001323639.1| - 0.089 13.1 0.0 0.2 11.9 0.0 1.8 1 1 0 1 1 1 0 RWD domain Phage_GP20 PF06810.11 gi|150399872|ref|YP_001323639.1| - 1.5 8.6 8.1 9.3 6.0 0.3 3.3 3 0 0 3 3 3 0 Phage minor structural protein GP20 ATP-grasp PF02222.22 gi|150399873|ref|YP_001323640.1| - 7.9e-59 198.1 0.0 1.3e-58 197.3 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|150399873|ref|YP_001323640.1| - 4.6e-07 29.6 0.1 4.1e-06 26.5 0.0 2.4 1 1 1 2 2 2 1 D-ala D-ala ligase C-terminus CPSase_L_D2 PF02786.17 gi|150399873|ref|YP_001323640.1| - 6.3e-06 25.8 0.0 1.4e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|150399873|ref|YP_001323640.1| - 3.2e-05 24.0 0.0 0.00012 22.1 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|150399873|ref|YP_001323640.1| - 0.00016 21.5 0.0 0.002 18.0 0.0 2.2 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Epimerase PF01370.21 gi|150399873|ref|YP_001323640.1| - 0.00088 18.8 0.0 0.0014 18.2 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 2-Hacid_dh_C PF02826.19 gi|150399873|ref|YP_001323640.1| - 0.0041 16.5 0.0 0.0086 15.4 0.0 1.6 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATPgrasp_N PF18130.1 gi|150399873|ref|YP_001323640.1| - 0.059 13.9 0.1 0.22 12.1 0.1 2.1 1 0 0 1 1 1 0 ATP-grasp N-terminal domain RmlD_sub_bind PF04321.17 gi|150399873|ref|YP_001323640.1| - 0.084 12.0 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 RmlD substrate binding domain YdjM PF04307.14 gi|150399874|ref|YP_001323641.1| - 2.9e-21 75.6 0.0 1.8e-20 72.9 0.0 2.0 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Zn_dep_PLPC PF00882.18 gi|150399874|ref|YP_001323641.1| - 0.023 14.7 0.0 0.093 12.7 0.0 1.9 1 1 0 1 1 1 0 Zinc dependent phospholipase C DUF4899 PF16240.5 gi|150399874|ref|YP_001323641.1| - 0.044 13.0 0.0 0.067 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4899) Fibrillarin_2 PF10113.9 gi|150399875|ref|YP_001323642.1| - 3.1e-230 765.0 0.1 3.5e-230 764.8 0.1 1.0 1 0 0 1 1 1 1 Fibrillarin-like archaeal protein DUF2478 PF10649.9 gi|150399875|ref|YP_001323642.1| - 0.2 11.2 0.0 4.3 6.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2478) Radical_SAM PF04055.21 gi|150399876|ref|YP_001323643.1| - 2e-13 51.0 0.2 3.7e-13 50.2 0.2 1.5 1 0 0 1 1 1 1 Radical SAM superfamily BATS PF06968.13 gi|150399876|ref|YP_001323643.1| - 7.5e-08 32.4 0.0 1.8e-07 31.2 0.0 1.7 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain HMD PF03201.16 gi|150399877|ref|YP_001323644.1| - 1.1e-38 131.3 0.3 2e-38 130.5 0.3 1.4 1 0 0 1 1 1 1 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase PDH PF02153.17 gi|150399877|ref|YP_001323644.1| - 0.00047 19.2 0.1 0.00084 18.4 0.1 1.3 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.15 gi|150399877|ref|YP_001323644.1| - 0.0039 17.4 0.0 0.011 15.9 0.0 1.8 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase PnpCD_PnpD_N PF18191.1 gi|150399877|ref|YP_001323644.1| - 0.058 13.0 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 Hydroquinone 1,2-dioxygenase large subunit N-terminal CoA_binding PF02629.19 gi|150399877|ref|YP_001323644.1| - 0.16 12.6 2.9 8.1 7.2 0.1 2.7 3 0 0 3 3 3 0 CoA binding domain Cyclase PF04199.13 gi|150399878|ref|YP_001323645.1| - 1.7e-13 51.0 0.0 2.3e-13 50.6 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase PHP PF02811.19 gi|150399879|ref|YP_001323646.1| - 5.8e-10 39.7 0.1 1.2e-09 38.7 0.1 1.5 1 1 0 1 1 1 1 PHP domain RNase_P_p30 PF01876.16 gi|150399879|ref|YP_001323646.1| - 0.00014 21.4 0.2 0.00027 20.5 0.2 1.5 1 1 0 1 1 1 1 RNase P subunit p30 Fumerase PF05681.14 gi|150399880|ref|YP_001323647.1| - 3.5e-92 308.6 0.0 4e-92 308.5 0.0 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) DUF1500 PF07389.12 gi|150399880|ref|YP_001323647.1| - 0.14 12.3 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1500) Pyridoxal_deC PF00282.19 gi|150399881|ref|YP_001323648.1| - 1e-27 96.8 0.0 1.4e-27 96.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_1_2 PF00155.21 gi|150399881|ref|YP_001323648.1| - 1.2e-05 24.6 0.0 0.00015 21.1 0.0 2.1 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|150399881|ref|YP_001323648.1| - 2.2e-05 23.6 0.0 0.00011 21.3 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|150399881|ref|YP_001323648.1| - 8e-05 22.1 0.0 0.00024 20.5 0.0 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_4 PF01063.19 gi|150399882|ref|YP_001323649.1| - 9.2e-51 172.8 0.0 1.1e-50 172.6 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV IMPDH PF00478.25 gi|150399883|ref|YP_001323650.1| - 3.2e-146 486.8 6.7 3.8e-146 486.5 6.7 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|150399883|ref|YP_001323650.1| - 3e-26 91.6 4.1 9.4e-13 48.4 0.3 3.3 3 1 0 3 3 3 2 CBS domain FMN_dh PF01070.18 gi|150399883|ref|YP_001323650.1| - 2.5e-14 53.1 6.0 3.5e-12 46.0 3.3 2.5 3 0 0 3 3 3 2 FMN-dependent dehydrogenase NMO PF03060.15 gi|150399883|ref|YP_001323650.1| - 9.4e-12 44.9 9.7 1.4e-09 37.8 5.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase Glu_synthase PF01645.17 gi|150399883|ref|YP_001323650.1| - 5e-08 32.5 6.6 8.2e-08 31.8 6.6 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|150399883|ref|YP_001323650.1| - 1.1e-05 25.1 8.7 7.7e-05 22.3 4.1 3.5 2 1 0 2 2 2 1 Histidine biosynthesis protein Dus PF01207.17 gi|150399883|ref|YP_001323650.1| - 4.4e-05 22.7 0.1 0.00013 21.2 0.1 1.7 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) TMP-TENI PF02581.17 gi|150399883|ref|YP_001323650.1| - 0.00014 21.3 4.4 0.036 13.4 0.3 2.5 1 1 1 2 2 2 2 Thiamine monophosphate synthase ThiG PF05690.14 gi|150399883|ref|YP_001323650.1| - 0.00073 18.9 4.0 0.0091 15.3 4.0 2.5 1 1 0 1 1 1 1 Thiazole biosynthesis protein ThiG Beta_elim_lyase PF01212.21 gi|150399883|ref|YP_001323650.1| - 0.002 17.5 1.0 0.005 16.2 1.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase NanE PF04131.14 gi|150399883|ref|YP_001323650.1| - 0.004 16.4 3.2 0.004 16.4 3.2 2.4 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase DHO_dh PF01180.21 gi|150399883|ref|YP_001323650.1| - 0.014 14.6 9.7 0.032 13.4 1.9 2.6 2 1 1 3 3 3 0 Dihydroorotate dehydrogenase DUF561 PF04481.12 gi|150399883|ref|YP_001323650.1| - 0.021 14.0 3.2 0.045 12.9 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF561) G3P_antiterm PF04309.12 gi|150399883|ref|YP_001323650.1| - 0.098 12.1 5.5 0.25 10.7 0.1 3.1 3 0 0 3 3 3 0 Glycerol-3-phosphate responsive antiterminator Auto_anti-p27 PF06677.12 gi|150399884|ref|YP_001323651.1| - 8.1e-13 48.3 0.2 1.3e-12 47.6 0.2 1.4 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-ribbon_3 PF13248.6 gi|150399884|ref|YP_001323651.1| - 0.0014 18.0 1.7 0.41 10.1 0.1 2.4 2 0 0 2 2 2 2 zinc-ribbon domain HypA PF01155.19 gi|150399884|ref|YP_001323651.1| - 0.0057 16.7 1.0 0.014 15.4 0.2 1.8 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|150399884|ref|YP_001323651.1| - 0.0058 16.6 0.7 0.0097 15.9 0.7 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|150399884|ref|YP_001323651.1| - 0.0099 16.6 0.8 0.022 15.5 0.8 1.6 1 0 0 1 1 1 1 zinc-ribbon family Zn-ribbon_8 PF09723.10 gi|150399884|ref|YP_001323651.1| - 0.041 14.0 1.6 0.098 12.8 1.6 1.7 1 0 0 1 1 1 0 Zinc ribbon domain zf-CCCH_6 PF18585.1 gi|150399884|ref|YP_001323651.1| - 0.054 13.4 0.2 0.18 11.7 0.1 1.9 2 0 0 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 NOB1_Zn_bind PF08772.11 gi|150399884|ref|YP_001323651.1| - 0.13 12.5 2.3 0.26 11.5 2.4 1.6 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DUF35_N PF12172.8 gi|150399884|ref|YP_001323651.1| - 0.18 11.7 1.0 0.36 10.8 1.0 1.5 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TF_Zn_Ribbon PF08271.12 gi|150399884|ref|YP_001323651.1| - 0.4 10.2 4.5 0.58 9.7 0.5 2.4 1 1 1 2 2 2 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|150399884|ref|YP_001323651.1| - 0.53 10.1 8.7 1.3 8.8 0.8 2.4 1 1 0 1 1 1 0 zinc-ribbon domain PALP PF00291.25 gi|150399885|ref|YP_001323652.1| - 3.7e-80 269.5 0.1 4.3e-80 269.3 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme RINGv PF12906.7 gi|150399885|ref|YP_001323652.1| - 0.067 13.3 0.9 0.12 12.5 0.9 1.4 1 0 0 1 1 1 0 RING-variant domain Aconitase_C PF00694.19 gi|150399886|ref|YP_001323653.1| - 3e-21 76.1 0.0 5.2e-21 75.3 0.0 1.5 2 0 0 2 2 2 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|150399886|ref|YP_001323653.1| - 0.18 11.4 0.1 0.63 9.6 0.1 2.0 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus DS PF01916.17 gi|150399887|ref|YP_001323654.1| - 4.1e-115 384.0 0.0 4.7e-115 383.8 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase FrhB_FdhB_C PF04432.13 gi|150399888|ref|YP_001323655.1| - 6e-39 133.3 0.6 6e-39 133.3 0.6 2.3 1 1 1 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|150399888|ref|YP_001323655.1| - 9.1e-20 70.6 0.0 2.6e-19 69.1 0.0 1.8 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.27 gi|150399888|ref|YP_001323655.1| - 3.9e-06 26.5 14.3 8.2e-05 22.3 3.7 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150399888|ref|YP_001323655.1| - 5.7e-06 26.8 16.3 0.00016 22.1 13.9 3.2 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399888|ref|YP_001323655.1| - 7.1e-06 26.4 22.9 4.3e-05 23.9 13.2 3.0 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150399888|ref|YP_001323655.1| - 1.7e-05 25.7 14.8 0.028 15.4 0.8 3.9 4 0 0 4 4 3 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|150399888|ref|YP_001323655.1| - 0.00028 21.1 1.4 0.00028 21.1 1.4 3.8 3 1 0 3 3 3 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150399888|ref|YP_001323655.1| - 0.00029 20.9 28.8 0.0015 18.6 1.5 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150399888|ref|YP_001323655.1| - 0.00037 21.0 20.6 0.0067 17.0 18.6 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399888|ref|YP_001323655.1| - 0.0006 20.0 10.3 0.17 12.1 0.3 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150399888|ref|YP_001323655.1| - 0.0016 18.4 17.6 0.028 14.5 3.5 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150399888|ref|YP_001323655.1| - 0.0033 17.5 22.7 0.015 15.5 18.1 3.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150399888|ref|YP_001323655.1| - 0.019 15.9 4.2 0.019 15.9 4.2 3.8 3 1 1 4 4 3 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399888|ref|YP_001323655.1| - 0.025 14.7 5.1 0.025 14.7 5.1 3.1 4 0 0 4 4 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150399888|ref|YP_001323655.1| - 0.034 14.3 17.6 0.075 13.2 1.2 3.2 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|150399888|ref|YP_001323655.1| - 0.035 14.9 20.8 0.46 11.3 9.0 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain DLH PF01738.18 gi|150399888|ref|YP_001323655.1| - 0.11 12.0 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Dienelactone hydrolase family Fer4_13 PF13370.6 gi|150399888|ref|YP_001323655.1| - 8.5 7.0 19.5 4.2 8.0 2.5 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Sua5_yciO_yrdC PF01300.18 gi|150399889|ref|YP_001323656.1| - 8.3e-37 126.4 0.0 1.2e-36 125.9 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.12 gi|150399889|ref|YP_001323656.1| - 9e-29 98.9 14.3 3.4e-15 55.5 4.8 2.4 2 0 0 2 2 2 2 HypF finger HypF_C PF17788.1 gi|150399889|ref|YP_001323656.1| - 5.7e-25 88.0 0.1 1.4e-24 86.8 0.1 1.7 1 0 0 1 1 1 1 HypF Kae1-like domain Acylphosphatase PF00708.18 gi|150399889|ref|YP_001323656.1| - 4.6e-22 78.2 0.0 1.3e-21 76.8 0.0 1.8 1 0 0 1 1 1 1 Acylphosphatase Peptidase_M22 PF00814.25 gi|150399889|ref|YP_001323656.1| - 0.00067 19.4 0.0 0.084 12.6 0.0 2.2 2 0 0 2 2 2 2 Glycoprotease family YwqJ-deaminase PF14431.6 gi|150399889|ref|YP_001323656.1| - 0.17 12.1 2.9 0.6 10.3 0.0 2.7 3 0 0 3 3 3 0 YwqJ-like deaminase SYF2 PF08231.12 gi|150399889|ref|YP_001323656.1| - 0.21 12.0 0.5 0.47 10.8 0.5 1.5 1 0 0 1 1 1 0 SYF2 splicing factor zf-C4_Topoisom PF01396.19 gi|150399890|ref|YP_001323657.1| - 1.9e-12 46.7 2.8 5.2e-12 45.3 2.8 1.8 1 0 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger DUF4309 PF14172.6 gi|150399890|ref|YP_001323657.1| - 0.05 13.6 0.4 0.094 12.7 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) TPP_enzyme_N PF02776.18 gi|150399891|ref|YP_001323658.1| - 1.1e-32 113.0 0.0 2.7e-32 111.8 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|150399891|ref|YP_001323658.1| - 3.9e-28 98.1 0.4 1.9e-26 92.7 0.4 2.6 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|150399891|ref|YP_001323658.1| - 1e-13 51.2 0.0 3.7e-13 49.4 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain Y1_Tnp PF01797.16 gi|150399891|ref|YP_001323658.1| - 0.1 12.7 0.3 2 8.5 0.0 2.8 3 0 0 3 3 3 0 Transposase IS200 like NHL PF01436.21 gi|150399891|ref|YP_001323658.1| - 0.15 12.1 1.1 0.39 10.8 0.1 2.3 3 0 0 3 3 3 0 NHL repeat DUF2117 PF09890.9 gi|150399892|ref|YP_001323659.1| - 2.1e-70 236.5 8.5 4e-70 235.6 8.5 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) DUF1464 PF07318.12 gi|150399892|ref|YP_001323659.1| - 0.0024 17.1 0.1 0.0038 16.4 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1464) FAA_hydrolase PF01557.18 gi|150399893|ref|YP_001323660.1| - 6.4e-64 215.6 0.0 7.2e-64 215.4 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Nucleoporin2 PF04096.14 gi|150399893|ref|YP_001323660.1| - 0.13 12.4 1.5 3.9 7.6 0.2 2.1 2 0 0 2 2 2 0 Nucleoporin autopeptidase Pribosyltran PF00156.27 gi|150399894|ref|YP_001323661.1| - 1.9e-16 60.0 3.1 2.4e-16 59.7 3.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|150399894|ref|YP_001323661.1| - 2.2e-05 24.0 0.0 3.6e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|150399894|ref|YP_001323661.1| - 0.00012 21.6 0.1 0.00019 21.0 0.1 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase DUF1967 PF09269.11 gi|150399894|ref|YP_001323661.1| - 0.15 12.0 2.0 15 5.6 0.2 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1967) Amino_oxidase PF01593.24 gi|150399895|ref|YP_001323662.1| - 1.7e-13 50.7 0.0 1.4e-09 37.8 0.0 2.1 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|150399895|ref|YP_001323662.1| - 3e-13 49.8 0.0 6.1e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|150399895|ref|YP_001323662.1| - 3.3e-07 29.9 7.3 0.00046 19.5 0.6 2.8 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|150399895|ref|YP_001323662.1| - 2.7e-06 26.4 0.4 2.1e-05 23.4 0.2 2.0 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.24 gi|150399895|ref|YP_001323662.1| - 6.6e-06 25.5 0.1 9.6e-06 24.9 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|150399895|ref|YP_001323662.1| - 1.1e-05 25.0 0.1 1.6e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 gi|150399895|ref|YP_001323662.1| - 1.2e-05 25.1 1.1 0.00026 20.7 0.3 2.7 3 0 0 3 3 3 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|150399895|ref|YP_001323662.1| - 0.00011 21.5 0.1 0.0088 15.3 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|150399895|ref|YP_001323662.1| - 0.00082 19.9 4.4 0.0019 18.7 0.5 2.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|150399895|ref|YP_001323662.1| - 0.00085 18.5 0.8 0.011 14.9 0.0 2.3 2 1 0 2 2 2 1 Glucose inhibited division protein A Thi4 PF01946.17 gi|150399895|ref|YP_001323662.1| - 0.00087 18.6 0.2 0.0017 17.7 0.2 1.4 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 gi|150399895|ref|YP_001323662.1| - 0.0029 16.9 0.2 0.0048 16.2 0.2 1.3 1 0 0 1 1 1 1 FAD binding domain FMO-like PF00743.19 gi|150399895|ref|YP_001323662.1| - 0.0037 15.8 0.1 0.0064 15.0 0.1 1.4 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like Trp_halogenase PF04820.14 gi|150399895|ref|YP_001323662.1| - 0.0048 15.8 0.1 0.0071 15.2 0.1 1.2 1 0 0 1 1 1 1 Tryptophan halogenase NAD_binding_9 PF13454.6 gi|150399895|ref|YP_001323662.1| - 0.034 14.1 0.0 0.28 11.1 0.0 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding Fer4_NifH PF00142.18 gi|150399896|ref|YP_001323663.1| - 2.1e-100 335.6 6.1 3.4e-100 335.0 6.1 1.2 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|150399896|ref|YP_001323663.1| - 3e-12 46.7 0.0 7.2e-12 45.5 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|150399896|ref|YP_001323663.1| - 4.1e-12 46.4 0.2 3.7e-11 43.3 0.1 2.1 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|150399896|ref|YP_001323663.1| - 2e-10 40.4 0.1 3.4e-10 39.6 0.1 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase ParA PF10609.9 gi|150399896|ref|YP_001323663.1| - 3e-09 36.7 1.1 4.6e-06 26.3 0.2 2.8 2 1 1 3 3 3 2 NUBPL iron-transfer P-loop NTPase MeaB PF03308.16 gi|150399896|ref|YP_001323663.1| - 8.2e-05 21.7 0.1 0.00014 20.9 0.1 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|150399896|ref|YP_001323663.1| - 9.8e-05 22.1 0.3 0.00023 20.9 0.3 1.6 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain MipZ PF09140.11 gi|150399896|ref|YP_001323663.1| - 0.0016 17.8 0.1 0.0027 17.0 0.1 1.3 1 0 0 1 1 1 1 ATPase MipZ CBP_BcsQ PF06564.12 gi|150399896|ref|YP_001323663.1| - 0.0075 15.8 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ RNA_helicase PF00910.22 gi|150399896|ref|YP_001323663.1| - 0.012 16.0 0.0 0.038 14.4 0.0 1.9 1 0 0 1 1 1 0 RNA helicase AAA_25 PF13481.6 gi|150399896|ref|YP_001323663.1| - 0.026 14.1 0.1 0.045 13.3 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|150399896|ref|YP_001323663.1| - 0.029 14.1 0.2 0.046 13.4 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|150399896|ref|YP_001323663.1| - 0.07 13.5 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain CLP1_P PF16575.5 gi|150399896|ref|YP_001323663.1| - 0.096 12.5 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_30 PF13604.6 gi|150399896|ref|YP_001323663.1| - 0.15 11.8 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|150399896|ref|YP_001323663.1| - 0.17 11.6 0.2 0.37 10.5 0.2 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein NACHT PF05729.12 gi|150399896|ref|YP_001323663.1| - 0.29 11.0 0.4 0.56 10.1 0.4 1.4 1 0 0 1 1 1 0 NACHT domain UPF0020 PF01170.18 gi|150399897|ref|YP_001323664.1| - 2.2e-31 109.1 0.1 1.3e-30 106.5 0.0 2.2 2 1 0 2 2 2 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|150399897|ref|YP_001323664.1| - 2.6e-12 47.1 5.2 4.6e-12 46.2 5.2 1.4 1 0 0 1 1 1 1 THUMP domain Methyltransf_15 PF09445.10 gi|150399897|ref|YP_001323664.1| - 4.9e-10 39.2 0.1 9.5e-10 38.3 0.1 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase N6_N4_Mtase PF01555.18 gi|150399897|ref|YP_001323664.1| - 6.9e-10 39.0 0.0 2.9e-07 30.4 0.0 2.2 2 0 0 2 2 2 2 DNA methylase N6_Mtase PF02384.16 gi|150399897|ref|YP_001323664.1| - 1.1e-06 28.2 0.0 2.1e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 N-6 DNA Methylase Cons_hypoth95 PF03602.15 gi|150399897|ref|YP_001323664.1| - 1.8e-06 27.7 0.0 6e-06 26.0 0.0 1.8 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 gi|150399897|ref|YP_001323664.1| - 6.6e-06 26.0 0.0 1.6e-05 24.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain AviRa PF11599.8 gi|150399897|ref|YP_001323664.1| - 1.7e-05 24.4 1.4 0.0096 15.4 0.1 2.5 2 1 1 3 3 3 2 RRNA methyltransferase AviRa Methyltransf_5 PF01795.19 gi|150399897|ref|YP_001323664.1| - 0.00049 19.7 0.0 0.00083 18.9 0.0 1.3 1 0 0 1 1 1 1 MraW methylase family Methyltransf_25 PF13649.6 gi|150399897|ref|YP_001323664.1| - 0.0006 20.5 0.0 0.0021 18.7 0.0 2.0 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|150399897|ref|YP_001323664.1| - 0.0012 18.7 0.0 0.0079 16.0 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain N2227 PF07942.12 gi|150399897|ref|YP_001323664.1| - 0.0013 18.0 0.4 1.7 7.7 0.0 3.2 2 1 1 3 3 3 1 N2227-like protein MethyltransfD12 PF02086.15 gi|150399897|ref|YP_001323664.1| - 0.0055 16.4 0.3 0.032 13.9 0.1 2.2 1 1 1 2 2 2 1 D12 class N6 adenine-specific DNA methyltransferase MTS PF05175.14 gi|150399897|ref|YP_001323664.1| - 0.015 14.9 0.0 0.025 14.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain SBP_bac_3 PF00497.20 gi|150399897|ref|YP_001323664.1| - 0.017 14.6 0.0 0.41 10.0 0.0 2.1 2 0 0 2 2 2 0 Bacterial extracellular solute-binding proteins, family 3 Methyltransf_10 PF05971.12 gi|150399897|ref|YP_001323664.1| - 0.025 13.9 0.0 0.05 12.9 0.0 1.4 1 0 0 1 1 1 0 RNA methyltransferase N6-adenineMlase PF10237.9 gi|150399897|ref|YP_001323664.1| - 0.069 13.0 0.1 0.39 10.5 0.0 2.1 2 1 0 2 2 2 0 Probable N6-adenine methyltransferase Pox_A28 PF04584.14 gi|150399897|ref|YP_001323664.1| - 0.072 13.3 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Poxvirus A28 family Methyltransf_12 PF08242.12 gi|150399897|ref|YP_001323664.1| - 0.082 13.7 0.0 0.18 12.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 gi|150399897|ref|YP_001323664.1| - 0.11 13.2 0.0 0.39 11.4 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain Ribo_biogen_C PF04034.13 gi|150399898|ref|YP_001323665.1| - 1.3e-45 154.2 0.2 1.6e-45 153.9 0.2 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|150399898|ref|YP_001323665.1| - 5.4e-11 42.1 0.4 1.1e-10 41.2 0.4 1.5 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Ribosomal_L40e PF01020.17 gi|150399899|ref|YP_001323666.1| - 8.2e-07 28.8 6.9 1e-06 28.5 6.9 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DNA_RNApol_7kD PF03604.13 gi|150399899|ref|YP_001323666.1| - 0.002 17.8 2.7 0.002 17.8 2.7 1.8 2 0 0 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.7 gi|150399899|ref|YP_001323666.1| - 0.0023 17.9 0.8 0.0025 17.8 0.8 1.2 1 0 0 1 1 1 1 Double zinc ribbon SelP_N PF04592.14 gi|150399899|ref|YP_001323666.1| - 0.0061 16.0 0.5 0.0061 16.0 0.5 1.0 1 0 0 1 1 1 1 Selenoprotein P, N terminal region HypA PF01155.19 gi|150399899|ref|YP_001323666.1| - 0.022 14.8 1.0 0.022 14.8 1.0 1.0 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|150399899|ref|YP_001323666.1| - 0.047 13.1 2.0 0.06 12.8 2.0 1.2 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|150399899|ref|YP_001323666.1| - 0.057 13.1 3.7 0.15 11.8 3.5 1.7 1 1 1 2 2 2 0 zinc-ribbon domain CitMHS PF03600.16 gi|150399900|ref|YP_001323667.1| - 7.9e-64 215.7 85.9 7.1e-50 169.9 44.7 2.3 1 1 1 2 2 2 2 Citrate transporter Na_sulph_symp PF00939.19 gi|150399900|ref|YP_001323667.1| - 2.1e-28 99.6 48.4 4.3e-15 55.7 23.2 3.3 2 2 1 3 3 3 3 Sodium:sulfate symporter transmembrane region DctM PF06808.12 gi|150399900|ref|YP_001323667.1| - 0.002 17.0 44.3 0.021 13.6 23.5 2.2 1 1 1 2 2 2 2 Tripartite ATP-independent periplasmic transporter, DctM component CreD PF06123.12 gi|150399900|ref|YP_001323667.1| - 0.13 11.0 4.0 0.32 9.7 4.0 1.6 1 0 0 1 1 1 0 Inner membrane protein CreD HMGL-like PF00682.19 gi|150399901|ref|YP_001323668.1| - 5.6e-83 278.5 0.6 7.3e-83 278.1 0.6 1.1 1 0 0 1 1 1 1 HMGL-like AP_endonuc_2 PF01261.24 gi|150399901|ref|YP_001323668.1| - 0.022 14.2 0.1 0.18 11.2 0.0 2.5 2 1 1 3 3 3 0 Xylose isomerase-like TIM barrel PASTA PF03793.19 gi|150399902|ref|YP_001323669.1| - 0.00091 19.0 0.1 0.0062 16.4 0.0 2.4 2 0 0 2 2 2 1 PASTA domain CRS1_YhbY PF01985.21 gi|150399903|ref|YP_001323670.1| - 3.4e-16 59.2 3.2 5.1e-16 58.6 3.2 1.3 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain DUF1611 PF07755.11 gi|150399903|ref|YP_001323670.1| - 0.085 12.1 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain WRKY PF03106.15 gi|150399903|ref|YP_001323670.1| - 0.21 11.9 2.9 0.23 11.7 1.4 1.8 2 0 0 2 2 2 0 WRKY DNA -binding domain Toprim PF01751.22 gi|150399903|ref|YP_001323670.1| - 0.23 11.7 3.2 0.36 11.1 0.2 2.0 2 0 0 2 2 2 0 Toprim domain Ribosomal_S19e PF01090.19 gi|150399904|ref|YP_001323671.1| - 1.1e-54 183.9 0.1 1.2e-54 183.7 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Lar_N PF09861.9 gi|150399904|ref|YP_001323671.1| - 0.0045 16.2 0.0 0.015 14.5 0.0 1.8 2 0 0 2 2 2 1 Lactate racemase N-terminal domain dsDNA_bind PF01984.20 gi|150399905|ref|YP_001323672.1| - 2.1e-27 95.6 12.7 2.3e-27 95.5 12.7 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain DUF2924 PF11149.8 gi|150399905|ref|YP_001323672.1| - 0.081 13.3 2.1 0.094 13.1 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2924) Glyco_transf_29 PF00777.18 gi|150399905|ref|YP_001323672.1| - 0.11 11.9 0.2 0.14 11.5 0.2 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 29 (sialyltransferase) EF-1_beta_acid PF10587.9 gi|150399905|ref|YP_001323672.1| - 9.4 6.8 8.3 1.6 9.2 0.7 2.7 3 0 0 3 3 3 0 Eukaryotic elongation factor 1 beta central acidic region QueC PF06508.13 gi|150399906|ref|YP_001323673.1| - 1.9e-05 24.2 0.0 0.00013 21.5 0.0 2.0 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|150399906|ref|YP_001323673.1| - 0.0038 16.9 0.0 0.0056 16.4 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.16 gi|150399906|ref|YP_001323673.1| - 0.011 14.6 0.0 0.014 14.2 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase Ribosomal_L39 PF00832.20 gi|150399907|ref|YP_001323674.1| - 1.7e-19 69.1 8.3 2e-19 68.9 8.3 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein AMP-binding_C_2 PF14535.6 gi|150399908|ref|YP_001323675.1| - 1.8e-30 105.1 0.1 3.8e-30 104.0 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|150399908|ref|YP_001323675.1| - 1.1e-15 57.1 0.5 1.9e-15 56.4 0.5 1.3 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.12 gi|150399908|ref|YP_001323675.1| - 0.00096 18.3 0.1 0.33 9.9 0.0 2.2 2 0 0 2 2 2 2 Acyl-protein synthetase, LuxE 2-ph_phosp PF04029.14 gi|150399909|ref|YP_001323676.1| - 1.4e-51 174.9 0.2 1.7e-51 174.6 0.2 1.0 1 0 0 1 1 1 1 2-phosphosulpholactate phosphatase DUF2194 PF09960.9 gi|150399909|ref|YP_001323676.1| - 0.0082 14.5 0.3 0.0082 14.5 0.3 1.2 1 0 0 1 1 1 1 Uncharacterised protein conserved in bacteria (DUF2194) End_beta_propel PF12217.8 gi|150399909|ref|YP_001323676.1| - 0.048 12.3 0.1 0.056 12.1 0.1 1.1 1 0 0 1 1 1 0 Catalytic beta propeller domain of bacteriophage endosialidase DUF116 PF01976.17 gi|150399910|ref|YP_001323677.1| - 1.6e-42 144.7 0.2 2e-42 144.3 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 SpoU_sub_bind PF08032.12 gi|150399910|ref|YP_001323677.1| - 0.00027 21.2 0.0 0.00053 20.2 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding ArsA_ATPase PF02374.15 gi|150399911|ref|YP_001323678.1| - 2e-116 388.5 2.7 2.3e-116 388.3 2.7 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.23 gi|150399911|ref|YP_001323678.1| - 1.7e-09 37.8 0.0 1.1e-08 35.2 0.0 2.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|150399911|ref|YP_001323678.1| - 2e-09 37.6 0.1 4.6e-09 36.4 0.0 1.7 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|150399911|ref|YP_001323678.1| - 3.2e-07 30.0 6.6 0.0077 15.7 2.1 3.1 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase SRP54 PF00448.22 gi|150399911|ref|YP_001323678.1| - 0.00018 21.2 1.9 0.038 13.6 0.5 3.2 3 0 0 3 3 3 1 SRP54-type protein, GTPase domain CBP_BcsQ PF06564.12 gi|150399911|ref|YP_001323678.1| - 0.0031 17.0 0.0 0.007 15.9 0.0 1.7 2 1 0 2 2 2 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|150399911|ref|YP_001323678.1| - 0.0057 16.1 0.1 0.013 15.0 0.1 1.6 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MeaB PF03308.16 gi|150399911|ref|YP_001323678.1| - 0.033 13.2 0.2 0.09 11.7 0.1 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 gi|150399911|ref|YP_001323678.1| - 0.042 13.6 1.0 0.12 12.2 0.2 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein NB-ARC PF00931.22 gi|150399911|ref|YP_001323678.1| - 0.052 12.7 0.5 0.1 11.7 0.5 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_25 PF13481.6 gi|150399911|ref|YP_001323678.1| - 0.066 12.8 0.2 0.2 11.2 0.2 1.8 1 1 0 1 1 1 0 AAA domain CbiX PF01903.17 gi|150399912|ref|YP_001323679.1| - 1.3e-31 109.1 0.4 1.7e-31 108.7 0.4 1.2 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|150399912|ref|YP_001323679.1| - 4.6e-08 32.7 0.3 5.9e-08 32.3 0.3 1.2 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) NTPase_1 PF03266.15 gi|150399912|ref|YP_001323679.1| - 0.026 14.4 0.0 0.036 14.0 0.0 1.2 1 0 0 1 1 1 0 NTPase ABC2_membrane PF01061.24 gi|150399913|ref|YP_001323680.1| - 2.4e-37 128.4 19.8 2.4e-37 128.4 19.8 1.5 1 1 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|150399913|ref|YP_001323680.1| - 1.1e-14 54.3 28.9 1.1e-14 54.3 28.9 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|150399913|ref|YP_001323680.1| - 0.00012 21.5 16.6 0.00016 21.1 16.6 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein MatE PF01554.18 gi|150399914|ref|YP_001323681.1| - 3.3e-61 205.6 37.7 7e-32 110.3 14.7 3.4 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.6 gi|150399914|ref|YP_001323681.1| - 3.3e-09 37.0 20.9 3.3e-09 37.0 20.9 4.6 3 2 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain ABC_tran PF00005.27 gi|150399915|ref|YP_001323682.1| - 9.2e-33 113.7 0.0 1.8e-32 112.7 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|150399915|ref|YP_001323682.1| - 2.3e-10 40.8 1.3 5.8e-06 26.3 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|150399915|ref|YP_001323682.1| - 2.5e-06 28.1 0.4 6.5e-06 26.8 0.4 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_15 PF13175.6 gi|150399915|ref|YP_001323682.1| - 1.1e-05 25.4 8.5 0.008 15.9 0.1 2.7 2 1 0 3 3 3 2 AAA ATPase domain AAA_29 PF13555.6 gi|150399915|ref|YP_001323682.1| - 4.9e-05 23.0 0.1 9e-05 22.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|150399915|ref|YP_001323682.1| - 0.00011 22.7 3.0 0.00021 21.9 3.0 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|150399915|ref|YP_001323682.1| - 0.00047 19.7 0.1 0.00089 18.8 0.1 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|150399915|ref|YP_001323682.1| - 0.00071 19.5 0.3 0.0016 18.4 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase Rad17 PF03215.15 gi|150399915|ref|YP_001323682.1| - 0.0047 16.9 0.0 0.0082 16.1 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA PF00004.29 gi|150399915|ref|YP_001323682.1| - 0.0059 17.0 0.4 0.13 12.7 0.4 2.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 gi|150399915|ref|YP_001323682.1| - 0.0084 15.7 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|150399915|ref|YP_001323682.1| - 0.013 15.2 0.0 4.4 6.9 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase PK PF00224.21 gi|150399915|ref|YP_001323682.1| - 0.08 11.8 0.5 0.12 11.2 0.5 1.3 1 0 0 1 1 1 0 Pyruvate kinase, barrel domain MMR_HSR1 PF01926.23 gi|150399915|ref|YP_001323682.1| - 0.12 12.5 0.6 0.29 11.2 0.6 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.6 gi|150399915|ref|YP_001323682.1| - 0.15 12.5 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain PadR PF03551.14 gi|150399916|ref|YP_001323683.1| - 2.8e-15 56.0 0.2 9.8e-15 54.3 0.1 1.8 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family TrmB PF01978.19 gi|150399916|ref|YP_001323683.1| - 0.00024 20.9 0.0 0.00043 20.1 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF505 PF04458.12 gi|150399916|ref|YP_001323683.1| - 0.00092 17.7 0.2 0.00095 17.7 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF505) HTH_45 PF14947.6 gi|150399916|ref|YP_001323683.1| - 0.0032 17.4 0.1 0.0073 16.3 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|150399916|ref|YP_001323683.1| - 0.009 15.8 0.1 0.013 15.3 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) JHBP PF06585.11 gi|150399916|ref|YP_001323683.1| - 0.014 14.6 0.2 0.018 14.2 0.2 1.1 1 0 0 1 1 1 0 Haemolymph juvenile hormone binding protein (JHBP) DUF1495 PF07381.11 gi|150399916|ref|YP_001323683.1| - 0.015 15.1 0.1 0.027 14.3 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) HxlR PF01638.17 gi|150399916|ref|YP_001323683.1| - 0.02 14.8 0.1 0.056 13.3 0.1 1.8 1 1 1 2 2 2 0 HxlR-like helix-turn-helix HTH_34 PF13601.6 gi|150399916|ref|YP_001323683.1| - 0.021 15.0 0.1 0.033 14.4 0.1 1.5 1 1 0 1 1 1 0 Winged helix DNA-binding domain HTH_46 PF15977.5 gi|150399916|ref|YP_001323683.1| - 0.025 14.6 0.2 0.051 13.6 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding HTH_27 PF13463.6 gi|150399916|ref|YP_001323683.1| - 0.029 14.8 0.0 0.057 13.9 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain LexA_DNA_bind PF01726.16 gi|150399916|ref|YP_001323683.1| - 0.045 13.5 0.0 0.071 12.9 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain Peptidase_M50 PF02163.22 gi|150399917|ref|YP_001323684.1| - 8e-19 67.9 6.2 6.4e-18 64.9 6.2 2.2 1 1 0 1 1 1 1 Peptidase family M50 PDZ_2 PF13180.6 gi|150399917|ref|YP_001323684.1| - 2.4e-10 40.6 0.0 3.8e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 gi|150399917|ref|YP_001323684.1| - 0.00066 19.5 0.1 0.0012 18.6 0.1 1.5 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|150399917|ref|YP_001323684.1| - 0.017 15.4 0.5 0.042 14.2 0.1 1.9 2 0 0 2 2 2 0 PDZ domain DUF3267 PF11667.8 gi|150399917|ref|YP_001323684.1| - 7.2 6.9 11.8 0.85 9.9 1.8 3.7 3 1 0 3 3 3 0 Putative zincin peptidase RimK PF08443.11 gi|150399918|ref|YP_001323685.1| - 1.4e-54 184.5 0.2 1.9e-54 184.1 0.2 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|150399918|ref|YP_001323685.1| - 8.4e-11 42.2 0.8 1.3e-10 41.6 0.8 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|150399918|ref|YP_001323685.1| - 2.9e-10 39.8 0.2 2.1e-07 30.4 0.0 3.1 1 1 1 2 2 2 1 YheC/D like ATP-grasp GSH-S_ATP PF02955.16 gi|150399918|ref|YP_001323685.1| - 5.5e-10 38.9 0.2 1e-09 38.0 0.2 1.4 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|150399918|ref|YP_001323685.1| - 3.2e-05 23.6 0.2 8.5e-05 22.2 0.2 1.6 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_ST PF14397.6 gi|150399918|ref|YP_001323685.1| - 0.00013 21.4 1.2 0.051 12.8 0.0 2.3 1 1 0 2 2 2 2 Sugar-transfer associated ATP-grasp Ins134_P3_kin PF05770.11 gi|150399918|ref|YP_001323685.1| - 0.00061 19.4 0.1 0.66 9.4 0.0 2.2 1 1 0 2 2 2 2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain CPSase_L_D2 PF02786.17 gi|150399918|ref|YP_001323685.1| - 0.0097 15.4 0.0 0.83 9.1 0.0 2.2 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain R2K_3 PF14243.6 gi|150399918|ref|YP_001323685.1| - 0.22 11.5 0.0 0.37 10.8 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 UPF0014 PF03649.13 gi|150399919|ref|YP_001323686.1| - 1.8e-64 217.4 17.4 2e-64 217.3 17.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) DHHC PF01529.20 gi|150399919|ref|YP_001323686.1| - 4.6 7.4 16.0 1.4 9.1 9.2 2.4 2 1 0 2 2 2 0 DHHC palmitoyltransferase DUF4229 PF14012.6 gi|150399919|ref|YP_001323686.1| - 5.8 7.1 14.0 0.98 9.6 0.8 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF4229) Mur_ligase_M PF08245.12 gi|150399920|ref|YP_001323687.1| - 3.6e-06 27.1 2.6 1.7e-05 24.9 2.6 2.1 1 1 0 1 1 1 1 Mur ligase middle domain HD PF01966.22 gi|150399921|ref|YP_001323688.1| - 1.2e-14 54.5 0.5 2.6e-14 53.5 0.5 1.6 1 0 0 1 1 1 1 HD domain HDOD PF08668.12 gi|150399921|ref|YP_001323688.1| - 0.0016 17.9 0.0 0.0036 16.8 0.0 1.5 1 0 0 1 1 1 1 HDOD domain GCD14 PF08704.10 gi|150399921|ref|YP_001323688.1| - 0.036 13.7 0.0 0.062 13.0 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DUF1570 PF07607.11 gi|150399921|ref|YP_001323688.1| - 0.048 14.0 0.0 0.15 12.4 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1570) FAIM1 PF06905.13 gi|150399921|ref|YP_001323688.1| - 0.073 12.8 0.0 0.61 9.8 0.0 2.1 2 0 0 2 2 2 0 Fas apoptotic inhibitory molecule (FAIM1) DUF3012 PF11216.8 gi|150399922|ref|YP_001323689.1| - 0.00022 21.2 0.1 0.00043 20.2 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3012) AAA PF00004.29 gi|150399923|ref|YP_001323690.1| - 9.2e-97 320.6 0.3 1.7e-47 161.2 0.0 3.0 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.18 gi|150399923|ref|YP_001323690.1| - 6.7e-31 106.3 0.2 2.7e-30 104.4 0.2 2.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_lid_3 PF17862.1 gi|150399923|ref|YP_001323690.1| - 6.2e-30 102.8 2.0 2.3e-17 62.5 0.3 2.9 2 0 0 2 2 2 2 AAA+ lid domain RuvB_N PF05496.12 gi|150399923|ref|YP_001323690.1| - 3.7e-17 62.5 0.0 6.8e-08 32.4 0.0 3.5 3 0 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|150399923|ref|YP_001323690.1| - 1.2e-16 61.2 0.1 8.1e-08 32.6 0.0 3.0 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|150399923|ref|YP_001323690.1| - 1.3e-14 54.9 0.0 3.7e-06 27.4 0.0 3.7 2 1 1 3 3 3 2 AAA ATPase domain TIP49 PF06068.13 gi|150399923|ref|YP_001323690.1| - 1.6e-13 50.6 1.6 1.9e-05 24.1 0.0 3.1 3 0 0 3 3 3 2 TIP49 P-loop domain CDC48_2 PF02933.17 gi|150399923|ref|YP_001323690.1| - 2.3e-13 49.7 4.8 2.3e-13 49.7 0.9 3.0 4 0 0 4 4 2 1 Cell division protein 48 (CDC48), domain 2 AAA_33 PF13671.6 gi|150399923|ref|YP_001323690.1| - 1.1e-11 45.0 0.0 2e-05 24.8 0.0 2.9 2 1 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|150399923|ref|YP_001323690.1| - 3e-11 43.5 0.3 0.00023 21.2 0.0 4.2 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|150399923|ref|YP_001323690.1| - 4.9e-11 42.8 0.0 0.00015 21.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|150399923|ref|YP_001323690.1| - 7.7e-11 42.4 0.5 0.0099 16.2 0.0 4.4 2 2 1 4 4 4 2 AAA domain AAA_18 PF13238.6 gi|150399923|ref|YP_001323690.1| - 4.5e-09 36.9 0.0 0.0043 17.6 0.0 3.4 3 1 0 3 3 3 2 AAA domain IstB_IS21 PF01695.17 gi|150399923|ref|YP_001323690.1| - 1.9e-08 34.3 0.0 0.0072 16.1 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_28 PF13521.6 gi|150399923|ref|YP_001323690.1| - 1.7e-07 31.6 0.0 0.0095 16.2 0.0 2.7 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|150399923|ref|YP_001323690.1| - 6.6e-07 28.9 0.5 0.053 12.9 0.0 2.9 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI ATPase PF06745.13 gi|150399923|ref|YP_001323690.1| - 8.1e-07 28.6 0.3 0.18 11.1 0.0 3.6 2 1 1 3 3 3 2 KaiC DUF815 PF05673.13 gi|150399923|ref|YP_001323690.1| - 8.2e-07 28.4 0.0 0.018 14.2 0.0 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF815) Sigma54_activat PF00158.26 gi|150399923|ref|YP_001323690.1| - 9.3e-07 28.7 0.1 0.1 12.3 0.0 3.8 2 2 0 2 2 2 2 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|150399923|ref|YP_001323690.1| - 1.4e-06 27.7 0.0 0.024 13.9 0.0 2.8 2 0 0 2 2 2 2 Zeta toxin AAA_7 PF12775.7 gi|150399923|ref|YP_001323690.1| - 1.7e-06 27.7 0.0 0.067 12.7 0.0 2.9 2 1 0 2 2 2 2 P-loop containing dynein motor region AAA_25 PF13481.6 gi|150399923|ref|YP_001323690.1| - 2.2e-06 27.4 4.2 0.96 9.0 0.3 4.2 3 1 0 3 3 3 3 AAA domain ABC_tran PF00005.27 gi|150399923|ref|YP_001323690.1| - 2.3e-06 28.2 0.3 0.12 12.9 0.0 3.1 2 1 0 2 2 2 2 ABC transporter RNA_helicase PF00910.22 gi|150399923|ref|YP_001323690.1| - 2.8e-06 27.7 0.0 0.12 12.8 0.0 2.9 2 0 0 2 2 2 2 RNA helicase TsaE PF02367.17 gi|150399923|ref|YP_001323690.1| - 5.8e-06 26.3 0.0 0.083 12.9 0.0 2.7 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_3 PF07726.11 gi|150399923|ref|YP_001323690.1| - 9.5e-06 25.5 0.0 0.053 13.4 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|150399923|ref|YP_001323690.1| - 9.6e-06 25.4 0.0 0.095 12.4 0.0 2.8 3 0 0 3 3 2 2 AAA domain PhoH PF02562.16 gi|150399923|ref|YP_001323690.1| - 2e-05 24.1 0.2 0.29 10.6 0.0 2.7 2 0 0 2 2 2 2 PhoH-like protein Bac_DnaA PF00308.18 gi|150399923|ref|YP_001323690.1| - 2.8e-05 24.1 0.0 0.078 12.8 0.0 3.1 2 1 0 2 2 2 2 Bacterial dnaA protein DUF2075 PF09848.9 gi|150399923|ref|YP_001323690.1| - 0.00016 21.0 0.0 0.18 11.0 0.0 2.5 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Sigma54_activ_2 PF14532.6 gi|150399923|ref|YP_001323690.1| - 0.00016 21.8 0.0 0.73 9.9 0.0 2.8 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 gi|150399923|ref|YP_001323690.1| - 0.00018 21.3 0.0 1 9.1 0.0 2.9 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.10 gi|150399923|ref|YP_001323690.1| - 0.00052 19.9 1.6 0.032 14.2 0.0 3.4 4 0 0 4 4 2 1 Vps4 C terminal oligomerisation domain NACHT PF05729.12 gi|150399923|ref|YP_001323690.1| - 0.00052 20.0 0.5 1.1 9.1 0.0 3.3 4 0 0 4 4 3 1 NACHT domain AAA_17 PF13207.6 gi|150399923|ref|YP_001323690.1| - 0.00057 20.3 4.2 2.3 8.7 0.0 4.6 4 1 0 4 4 4 1 AAA domain NB-ARC PF00931.22 gi|150399923|ref|YP_001323690.1| - 0.0016 17.7 0.0 1.6 7.8 0.0 2.9 3 0 0 3 3 2 1 NB-ARC domain AAA_11 PF13086.6 gi|150399923|ref|YP_001323690.1| - 0.002 18.0 1.1 2.3 7.9 0.0 2.8 3 0 0 3 3 3 2 AAA domain Parvo_NS1 PF01057.17 gi|150399923|ref|YP_001323690.1| - 0.0021 17.2 0.1 1.2 8.1 0.0 2.3 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 Viral_helicase1 PF01443.18 gi|150399923|ref|YP_001323690.1| - 0.0026 17.5 0.0 0.53 10.0 0.0 2.3 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase NTPase_1 PF03266.15 gi|150399923|ref|YP_001323690.1| - 0.0036 17.2 4.8 1.9 8.4 0.0 4.3 3 2 1 4 4 3 1 NTPase Cytidylate_kin2 PF13189.6 gi|150399923|ref|YP_001323690.1| - 0.0045 17.1 0.4 0.6 10.2 0.0 3.1 3 0 0 3 3 3 1 Cytidylate kinase-like family AAA_19 PF13245.6 gi|150399923|ref|YP_001323690.1| - 0.0059 16.9 3.4 2.7 8.3 0.1 3.1 2 2 0 3 3 2 1 AAA domain MCM PF00493.23 gi|150399923|ref|YP_001323690.1| - 0.0089 15.2 0.0 2.4 7.2 0.0 2.5 2 0 0 2 2 2 1 MCM P-loop domain ATP-synt_ab PF00006.25 gi|150399923|ref|YP_001323690.1| - 0.015 15.0 0.0 4.3 6.9 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Rad17 PF03215.15 gi|150399923|ref|YP_001323690.1| - 0.021 14.8 0.0 4.2 7.3 0.0 2.7 2 0 0 2 2 2 0 Rad17 P-loop domain T2SSE PF00437.20 gi|150399923|ref|YP_001323690.1| - 0.023 13.7 0.0 4.7 6.2 0.0 2.7 2 0 0 2 2 2 0 Type II/IV secretion system protein AFG1_ATPase PF03969.16 gi|150399923|ref|YP_001323690.1| - 0.026 13.4 0.0 4.3 6.1 0.0 2.3 2 0 0 2 2 2 0 AFG1-like ATPase SKI PF01202.22 gi|150399923|ref|YP_001323690.1| - 0.034 14.3 0.0 9.6 6.3 0.0 2.7 2 0 0 2 2 2 0 Shikimate kinase MMR_HSR1 PF01926.23 gi|150399923|ref|YP_001323690.1| - 0.037 14.1 0.0 5.8 7.0 0.0 3.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_29 PF13555.6 gi|150399923|ref|YP_001323690.1| - 0.041 13.6 0.0 11 5.8 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain PduV-EutP PF10662.9 gi|150399923|ref|YP_001323690.1| - 0.046 13.5 0.0 9.8 5.9 0.0 2.8 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation ResIII PF04851.15 gi|150399923|ref|YP_001323690.1| - 0.053 13.5 0.0 12 5.9 0.0 2.8 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit TTRAP PF14203.6 gi|150399923|ref|YP_001323690.1| - 0.065 13.2 0.8 0.96 9.5 0.0 3.1 3 0 0 3 3 2 0 Putative tranposon-transfer assisting protein Cytidylate_kin PF02224.18 gi|150399923|ref|YP_001323690.1| - 0.075 12.8 2.7 9.5 5.9 0.0 3.2 3 0 0 3 3 3 0 Cytidylate kinase cobW PF02492.19 gi|150399923|ref|YP_001323690.1| - 0.088 12.4 0.4 22 4.6 0.1 3.2 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain KTI12 PF08433.10 gi|150399923|ref|YP_001323690.1| - 0.92 8.9 4.2 49 3.2 0.0 3.4 3 1 0 3 3 3 0 Chromatin associated protein KTI12 zinc_ribbon_4 PF13717.6 gi|150399924|ref|YP_001323691.1| - 0.00071 19.4 9.7 0.13 12.2 2.2 4.0 3 1 0 3 3 3 1 zinc-ribbon domain zf-MYND PF01753.18 gi|150399924|ref|YP_001323691.1| - 0.0043 17.1 4.0 0.14 12.3 1.0 2.6 2 1 0 2 2 2 1 MYND finger Zn-ribbon_8 PF09723.10 gi|150399924|ref|YP_001323691.1| - 0.011 15.9 3.5 0.61 10.3 0.1 3.1 3 0 0 3 3 3 0 Zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|150399924|ref|YP_001323691.1| - 0.019 14.7 8.9 0.097 12.4 0.1 3.6 4 0 0 4 4 4 0 DNA directed RNA polymerase, 7 kDa subunit eIF-5_eIF-2B PF01873.17 gi|150399924|ref|YP_001323691.1| - 0.025 14.5 10.4 0.13 12.1 0.8 2.6 1 1 2 3 3 3 0 Domain found in IF2B/IF5 OrfB_Zn_ribbon PF07282.11 gi|150399924|ref|YP_001323691.1| - 0.034 14.1 5.0 0.86 9.6 0.3 2.5 2 1 0 2 2 2 0 Putative transposase DNA-binding domain Lar_restr_allev PF14354.6 gi|150399924|ref|YP_001323691.1| - 0.034 14.5 10.9 1.2 9.5 2.6 3.5 1 1 1 2 2 2 0 Restriction alleviation protein Lar zf-C2HE PF16278.5 gi|150399924|ref|YP_001323691.1| - 0.044 14.2 0.3 0.044 14.2 0.3 2.7 3 1 1 4 4 3 0 C2HE / C2H2 / C2HC zinc-binding finger C1_1 PF00130.22 gi|150399924|ref|YP_001323691.1| - 0.08 12.8 0.6 0.08 12.8 0.6 2.5 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF4606 PF15379.6 gi|150399924|ref|YP_001323691.1| - 0.097 12.9 1.5 0.18 12.0 1.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4606) zinc_ribbon_13 PF09855.9 gi|150399924|ref|YP_001323691.1| - 0.1 12.8 0.4 0.1 12.8 0.4 3.3 3 1 0 3 3 3 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) DUF35_N PF12172.8 gi|150399924|ref|YP_001323691.1| - 0.12 12.3 5.9 0.92 9.4 0.9 3.2 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_5 PF13719.6 gi|150399924|ref|YP_001323691.1| - 0.18 11.6 9.8 5 7.0 1.7 3.7 2 2 1 3 3 3 0 zinc-ribbon domain DUF5319 PF17252.2 gi|150399924|ref|YP_001323691.1| - 0.38 11.0 4.0 1.1 9.5 0.8 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5319) Sgf11 PF08209.11 gi|150399924|ref|YP_001323691.1| - 0.64 9.6 13.6 8 6.1 0.2 4.1 4 0 0 4 4 4 0 Sgf11 (transcriptional regulation protein) Fer4_18 PF13746.6 gi|150399924|ref|YP_001323691.1| - 0.98 9.6 7.7 0.73 10.0 3.1 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Zn_Tnp_IS1595 PF12760.7 gi|150399924|ref|YP_001323691.1| - 1.5 8.9 12.1 3.6 7.6 0.1 3.6 2 1 1 3 3 3 0 Transposase zinc-ribbon domain TFIIS_C PF01096.18 gi|150399924|ref|YP_001323691.1| - 2.3 8.1 15.4 4.1 7.4 0.2 3.9 4 0 0 4 4 4 0 Transcription factor S-II (TFIIS) zf-ribbon_3 PF13248.6 gi|150399924|ref|YP_001323691.1| - 2.8 7.5 12.0 4.2 6.9 0.2 4.0 4 0 0 4 4 4 0 zinc-ribbon domain zf-C2HC5 PF06221.13 gi|150399924|ref|YP_001323691.1| - 4.8 7.3 12.4 0.1 12.6 2.1 2.8 2 2 0 2 2 2 0 Putative zinc finger motif, C2HC5-type DZR PF12773.7 gi|150399924|ref|YP_001323691.1| - 6.7 6.8 9.9 8.4e+02 0.1 9.9 3.1 1 1 0 1 1 1 0 Double zinc ribbon zf-CCHC PF00098.23 gi|150399924|ref|YP_001323691.1| - 7.3 6.8 20.5 0.99 9.6 2.1 4.0 4 0 0 4 4 4 0 Zinc knuckle RIG-I_C-RD PF11648.8 gi|150399924|ref|YP_001323691.1| - 7.7 6.8 10.0 6.4 7.0 4.1 3.0 2 1 1 3 3 3 0 C-terminal domain of RIG-I zf-LSD1 PF06943.12 gi|150399924|ref|YP_001323691.1| - 8.2 6.4 12.3 3.5 7.6 0.1 3.6 4 0 0 4 4 4 0 LSD1 zinc finger GATase_5 PF13507.6 gi|150399925|ref|YP_001323692.1| - 1.2e-82 276.9 0.0 1.4e-82 276.7 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 gi|150399925|ref|YP_001323692.1| - 1.6e-05 24.6 0.0 3.4e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|150399925|ref|YP_001323692.1| - 7.8e-05 22.5 0.1 0.00015 21.6 0.1 1.7 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|150399925|ref|YP_001323692.1| - 0.002 17.9 0.0 0.0066 16.3 0.0 1.8 1 1 0 1 1 1 1 DJ-1/PfpI family AIRS_C PF02769.22 gi|150399926|ref|YP_001323693.1| - 1e-45 155.6 0.1 1.1e-23 84.1 0.1 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain FGAR-AT_linker PF18072.1 gi|150399926|ref|YP_001323693.1| - 1.6e-14 54.2 0.0 8.2e-14 51.9 0.0 2.3 2 0 0 2 2 2 1 Formylglycinamide ribonucleotide amidotransferase linker domain AIRS PF00586.24 gi|150399926|ref|YP_001323693.1| - 2.6e-13 50.4 0.3 1e-07 32.5 0.0 2.8 3 0 0 3 3 3 2 AIR synthase related protein, N-terminal domain PurS PF02700.14 gi|150399926|ref|YP_001323693.1| - 0.0012 18.9 0.6 1.9 8.7 0.0 3.9 3 0 0 3 3 3 2 Phosphoribosylformylglycinamidine (FGAM) synthase Propep_M14 PF02244.16 gi|150399926|ref|YP_001323693.1| - 0.069 13.6 0.9 23 5.5 0.0 3.0 3 0 0 3 3 3 0 Carboxypeptidase activation peptide DMRL_synthase PF00885.19 gi|150399927|ref|YP_001323694.1| - 9.2e-15 54.7 0.1 1.1e-14 54.4 0.1 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DHBP_synthase PF00926.19 gi|150399928|ref|YP_001323695.1| - 1.1e-60 204.4 0.0 1.3e-60 204.2 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PEP-utilizers PF00391.23 gi|150399928|ref|YP_001323695.1| - 0.0042 16.8 0.1 1.6 8.5 0.0 2.8 3 0 0 3 3 3 2 PEP-utilising enzyme, mobile domain CTP-dep_RFKase PF01982.16 gi|150399929|ref|YP_001323696.1| - 4.6e-32 110.7 0.1 5.6e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF120 PNP_UDP_1 PF01048.20 gi|150399930|ref|YP_001323697.1| - 2e-38 131.9 0.0 2.4e-38 131.7 0.0 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily Sua5_yciO_yrdC PF01300.18 gi|150399931|ref|YP_001323698.1| - 4.6e-46 156.6 0.1 5.3e-46 156.4 0.1 1.0 1 0 0 1 1 1 1 Telomere recombination ThiC_Rad_SAM PF01964.18 gi|150399932|ref|YP_001323699.1| - 2.2e-188 626.3 0.2 2.5e-188 626.1 0.2 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family Diphthamide_syn PF01866.17 gi|150399933|ref|YP_001323700.1| - 1.2e-51 175.9 4.4 1.4e-49 169.2 4.4 2.0 1 1 0 1 1 1 1 Putative diphthamide synthesis protein Focadhesin PF11229.8 gi|150399933|ref|YP_001323700.1| - 0.02 13.1 0.2 0.025 12.8 0.2 1.2 1 0 0 1 1 1 0 Focadhesin FeoA PF04023.14 gi|150399934|ref|YP_001323701.1| - 8.5e-11 42.0 0.1 1.4e-10 41.3 0.1 1.4 1 1 0 1 1 1 1 FeoA domain AlaDh_PNT_C PF01262.21 gi|150399935|ref|YP_001323702.1| - 6.8e-09 35.3 0.0 8.7e-09 35.0 0.0 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Methyltransf_31 PF13847.6 gi|150399935|ref|YP_001323702.1| - 3.5e-07 30.1 0.2 5.7e-07 29.5 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain NAS PF03059.16 gi|150399935|ref|YP_001323702.1| - 3.8e-07 29.7 0.1 5e-07 29.3 0.1 1.1 1 0 0 1 1 1 1 Nicotianamine synthase protein PrmA PF06325.13 gi|150399935|ref|YP_001323702.1| - 7.3e-06 25.6 1.3 9.3e-06 25.2 1.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|150399935|ref|YP_001323702.1| - 1.7e-05 24.8 0.4 2.2e-05 24.4 0.4 1.2 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|150399935|ref|YP_001323702.1| - 2.9e-05 23.6 2.3 2.9e-05 23.6 2.3 1.4 2 0 0 2 2 2 1 Tellurite resistance protein TehB RrnaAD PF00398.20 gi|150399935|ref|YP_001323702.1| - 4.3e-05 22.7 0.4 5.3e-05 22.4 0.4 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_12 PF08242.12 gi|150399935|ref|YP_001323702.1| - 6.6e-05 23.6 0.1 9.6e-05 23.1 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|150399935|ref|YP_001323702.1| - 7.1e-05 23.4 0.0 0.0001 22.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|150399935|ref|YP_001323702.1| - 8.4e-05 22.4 0.1 0.00012 21.9 0.1 1.2 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Spermine_synth PF01564.17 gi|150399935|ref|YP_001323702.1| - 0.00013 21.4 0.4 0.00019 20.9 0.4 1.3 1 0 0 1 1 1 1 Spermine/spermidine synthase domain MTS PF05175.14 gi|150399935|ref|YP_001323702.1| - 0.00027 20.6 0.2 0.00037 20.1 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Shikimate_DH PF01488.20 gi|150399935|ref|YP_001323702.1| - 0.00034 20.7 0.3 0.00054 20.0 0.3 1.3 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 gi|150399935|ref|YP_001323702.1| - 0.00073 19.9 0.2 0.001 19.5 0.2 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding Citrate_bind PF16114.5 gi|150399935|ref|YP_001323702.1| - 0.0018 17.8 0.4 0.0028 17.2 0.4 1.3 1 0 0 1 1 1 1 ATP citrate lyase citrate-binding Methyltransf_11 PF08241.12 gi|150399935|ref|YP_001323702.1| - 0.0023 18.5 0.0 0.0037 17.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain 3HCDH_N PF02737.18 gi|150399935|ref|YP_001323702.1| - 0.0068 16.3 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|150399935|ref|YP_001323702.1| - 0.012 15.2 0.2 0.022 14.3 0.2 1.6 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Methyltransf_23 PF13489.6 gi|150399935|ref|YP_001323702.1| - 0.026 14.4 0.0 0.035 14.0 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 gi|150399935|ref|YP_001323702.1| - 0.044 13.2 0.2 0.059 12.8 0.2 1.4 1 0 0 1 1 1 0 Putative methyltransferase Sacchrp_dh_NADP PF03435.18 gi|150399935|ref|YP_001323702.1| - 0.077 13.3 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|150399935|ref|YP_001323702.1| - 0.11 13.0 0.4 0.25 11.9 0.5 1.6 1 1 1 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent LPG_synthase_TM PF03706.13 gi|150399936|ref|YP_001323703.1| - 4.6e-35 121.6 17.6 6.4e-35 121.1 17.6 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region FeoB_N PF02421.18 gi|150399937|ref|YP_001323704.1| - 8.9e-42 142.3 3.3 1.7e-20 73.1 0.5 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B Gate PF07670.14 gi|150399937|ref|YP_001323704.1| - 7.2e-25 87.5 12.3 3.3e-14 53.1 1.0 3.1 3 0 0 3 3 3 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|150399937|ref|YP_001323704.1| - 7.1e-14 51.9 0.1 1.5e-13 50.8 0.1 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|150399937|ref|YP_001323704.1| - 3.1e-10 39.6 2.4 3.1e-10 39.6 2.4 3.1 3 0 0 3 3 3 1 Ferrous iron transport protein B C terminus RsgA_GTPase PF03193.16 gi|150399937|ref|YP_001323704.1| - 3.7e-05 23.7 0.2 0.064 13.2 0.1 2.3 2 0 0 2 2 2 2 RsgA GTPase SRPRB PF09439.10 gi|150399937|ref|YP_001323704.1| - 0.0031 16.9 0.0 0.0031 16.9 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit AIG1 PF04548.16 gi|150399937|ref|YP_001323704.1| - 0.021 14.1 0.1 0.039 13.3 0.1 1.4 1 0 0 1 1 1 0 AIG1 family ATP_bind_1 PF03029.17 gi|150399937|ref|YP_001323704.1| - 0.027 14.2 0.0 0.11 12.2 0.0 1.9 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein PduV-EutP PF10662.9 gi|150399937|ref|YP_001323704.1| - 0.031 14.0 1.8 3.2 7.5 0.0 2.7 2 1 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation Gtr1_RagA PF04670.12 gi|150399937|ref|YP_001323704.1| - 0.098 12.0 0.1 0.49 9.7 0.0 2.0 1 1 1 2 2 2 0 Gtr1/RagA G protein conserved region DUF3090 PF11290.8 gi|150399937|ref|YP_001323704.1| - 0.12 12.2 0.2 0.2 11.5 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3090) Radical_SAM PF04055.21 gi|150399938|ref|YP_001323705.1| - 3.4e-06 27.5 0.1 2.2e-05 24.9 0.0 2.2 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|150399938|ref|YP_001323705.1| - 0.0048 17.0 1.3 0.019 15.1 0.0 2.4 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|150399938|ref|YP_001323705.1| - 0.013 15.8 0.0 0.038 14.2 0.0 1.8 1 0 0 1 1 1 0 4Fe-4S single cluster domain YmzC PF14157.6 gi|150399938|ref|YP_001323705.1| - 0.069 13.3 0.3 0.18 11.9 0.3 1.7 1 0 0 1 1 1 0 YmzC-like protein PolC_DP2 PF03833.13 gi|150399939|ref|YP_001323706.1| - 0 1172.1 2.0 0 1170.3 0.1 2.2 2 1 0 2 2 2 1 DNA polymerase II large subunit DP2 HTH_46 PF15977.5 gi|150399939|ref|YP_001323706.1| - 0.089 12.8 0.1 0.39 10.8 0.1 2.1 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding Sigma70_r3 PF04539.16 gi|150399939|ref|YP_001323706.1| - 0.14 12.2 0.3 0.54 10.4 0.3 2.0 1 0 0 1 1 1 0 Sigma-70 region 3 DUF5442 PF17514.2 gi|150399939|ref|YP_001323706.1| - 0.28 11.4 5.1 0.49 10.6 0.1 3.3 3 0 0 3 3 3 0 Family of unknown function (DUF5442) zf-ribbon_3 PF13248.6 gi|150399939|ref|YP_001323706.1| - 0.32 10.5 2.4 4 7.0 0.2 2.7 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2HC5 PF06221.13 gi|150399939|ref|YP_001323706.1| - 2 8.4 5.9 1.1 9.3 0.9 2.3 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type AAA PF00004.29 gi|150399940|ref|YP_001323707.1| - 6.7e-39 133.3 0.0 1.2e-38 132.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 gi|150399940|ref|YP_001323707.1| - 1e-09 38.7 0.0 1.7e-09 38.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|150399940|ref|YP_001323707.1| - 9.6e-08 31.9 0.0 3.9e-07 29.9 0.0 2.0 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 gi|150399940|ref|YP_001323707.1| - 1e-07 31.5 0.0 2.2e-07 30.4 0.0 1.5 1 1 0 1 1 1 1 TIP49 P-loop domain AAA_5 PF07728.14 gi|150399940|ref|YP_001323707.1| - 1.6e-05 24.9 0.0 5.9e-05 23.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|150399940|ref|YP_001323707.1| - 5.2e-05 23.7 0.2 0.0034 17.8 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|150399940|ref|YP_001323707.1| - 0.00017 21.9 0.2 0.0044 17.3 0.2 2.4 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|150399940|ref|YP_001323707.1| - 0.00039 20.2 0.0 0.00089 19.0 0.0 1.7 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.6 gi|150399940|ref|YP_001323707.1| - 0.00053 20.3 0.0 0.0024 18.1 0.0 2.1 3 0 0 3 3 2 1 AAA domain DUF815 PF05673.13 gi|150399940|ref|YP_001323707.1| - 0.00058 19.1 0.0 0.03 13.5 0.0 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 gi|150399940|ref|YP_001323707.1| - 0.00064 19.9 0.0 0.0011 19.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|150399940|ref|YP_001323707.1| - 0.00076 18.9 0.0 0.0016 17.8 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Bac_DnaA PF00308.18 gi|150399940|ref|YP_001323707.1| - 0.0027 17.6 0.2 0.0083 16.0 0.2 1.7 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_18 PF13238.6 gi|150399940|ref|YP_001323707.1| - 0.0034 17.9 0.0 0.0092 16.5 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 gi|150399940|ref|YP_001323707.1| - 0.0057 16.2 0.0 0.073 12.6 0.0 2.6 2 1 0 2 2 2 1 P-loop containing dynein motor region AAA_24 PF13479.6 gi|150399940|ref|YP_001323707.1| - 0.0067 16.2 0.0 0.013 15.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain Parvo_NS1 PF01057.17 gi|150399940|ref|YP_001323707.1| - 0.0084 15.2 0.0 0.014 14.5 0.0 1.3 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 RNA_helicase PF00910.22 gi|150399940|ref|YP_001323707.1| - 0.02 15.2 0.0 0.045 14.2 0.0 1.6 1 0 0 1 1 1 0 RNA helicase ATPase PF06745.13 gi|150399940|ref|YP_001323707.1| - 0.04 13.3 0.1 0.99 8.7 0.0 2.4 2 0 0 2 2 2 0 KaiC PhoH PF02562.16 gi|150399940|ref|YP_001323707.1| - 0.046 13.2 0.0 0.23 10.9 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein Sigma54_activat PF00158.26 gi|150399940|ref|YP_001323707.1| - 0.055 13.2 0.0 0.61 9.8 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_lid_3 PF17862.1 gi|150399940|ref|YP_001323707.1| - 0.083 12.7 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA+ lid domain DUF2075 PF09848.9 gi|150399940|ref|YP_001323707.1| - 0.089 12.0 0.0 0.37 10.0 0.0 1.8 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_25 PF13481.6 gi|150399940|ref|YP_001323707.1| - 0.11 12.0 0.0 0.28 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|150399940|ref|YP_001323707.1| - 0.12 12.4 0.0 0.31 11.0 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 gi|150399940|ref|YP_001323707.1| - 0.14 12.1 0.0 0.84 9.5 0.0 2.2 3 0 0 3 3 3 0 NACHT domain SDH_sah PF01972.16 gi|150399941|ref|YP_001323708.1| - 4.4e-137 455.8 0.3 5.7e-137 455.4 0.3 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.23 gi|150399941|ref|YP_001323708.1| - 4.6e-05 23.4 0.3 0.00011 22.1 0.1 1.7 2 0 0 2 2 2 1 Clp protease ECH_1 PF00378.20 gi|150399941|ref|YP_001323708.1| - 0.0013 18.1 0.1 0.0031 16.9 0.0 1.6 2 0 0 2 2 2 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 gi|150399941|ref|YP_001323708.1| - 0.0027 17.7 0.3 0.0066 16.4 0.1 1.7 2 0 0 2 2 2 1 Peptidase family S49 DUF192 PF02643.15 gi|150399942|ref|YP_001323709.1| - 2.3e-15 56.5 0.0 2.6e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 DUF2121 PF09894.9 gi|150399943|ref|YP_001323710.1| - 3.9e-57 193.0 11.3 7.3e-57 192.1 11.3 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2121) Tsc35 PF15079.6 gi|150399943|ref|YP_001323710.1| - 0.01 15.5 0.9 0.01 15.5 0.9 2.0 1 1 1 2 2 2 1 Testis-specific protein 35 Bro-N PF02498.17 gi|150399943|ref|YP_001323710.1| - 0.1 13.3 1.0 0.21 12.3 0.2 2.0 2 0 0 2 2 2 0 BRO family, N-terminal domain NikR_C PF08753.11 gi|150399944|ref|YP_001323711.1| - 9e-34 115.5 7.6 1.3e-33 114.9 7.6 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|150399944|ref|YP_001323711.1| - 9.3e-10 38.1 0.5 1.6e-09 37.4 0.5 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|150399944|ref|YP_001323711.1| - 0.0035 17.5 0.1 0.0044 17.2 0.1 1.4 1 1 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family HicB_lk_antitox PF15919.5 gi|150399944|ref|YP_001323711.1| - 0.0089 16.1 0.2 0.034 14.3 0.0 1.9 2 0 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF2798 PF11391.8 gi|150399945|ref|YP_001323712.1| - 1.8e-18 66.3 6.2 2.1e-18 66.1 6.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2798) DUF4396 PF14342.6 gi|150399945|ref|YP_001323712.1| - 0.0056 17.0 1.2 0.0067 16.8 1.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4396) DUF3533 PF12051.8 gi|150399945|ref|YP_001323712.1| - 0.048 12.6 2.7 0.047 12.6 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) IRK PF01007.20 gi|150399945|ref|YP_001323712.1| - 0.092 12.6 0.6 0.099 12.5 0.6 1.1 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain SieB PF14163.6 gi|150399945|ref|YP_001323712.1| - 1.2 8.6 4.6 2.8 7.4 0.1 2.0 1 1 0 2 2 2 0 Super-infection exclusion protein B HTH_1 PF00126.27 gi|150399946|ref|YP_001323713.1| - 3.8e-07 29.9 0.0 5.9e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family GerE PF00196.19 gi|150399946|ref|YP_001323713.1| - 3.3e-06 26.6 0.1 6.7e-06 25.6 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_24 PF13412.6 gi|150399946|ref|YP_001323713.1| - 0.0018 17.8 0.2 0.0043 16.6 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|150399946|ref|YP_001323713.1| - 0.0023 17.7 0.0 0.0057 16.4 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|150399946|ref|YP_001323713.1| - 0.0082 15.8 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 gi|150399946|ref|YP_001323713.1| - 0.0091 15.7 0.0 0.032 14.0 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_30 PF13556.6 gi|150399946|ref|YP_001323713.1| - 0.03 14.1 0.0 0.057 13.2 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Legionella_OMP PF05150.12 gi|150399946|ref|YP_001323713.1| - 0.041 12.8 0.0 0.059 12.3 0.0 1.2 1 0 0 1 1 1 0 Legionella pneumophila major outer membrane protein precursor MarR_2 PF12802.7 gi|150399946|ref|YP_001323713.1| - 0.054 13.4 0.0 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 MarR family DUF742 PF05331.11 gi|150399946|ref|YP_001323713.1| - 0.061 13.1 0.0 0.098 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF742) CENP-B_N PF04218.13 gi|150399946|ref|YP_001323713.1| - 0.088 12.5 0.0 0.25 11.0 0.0 1.8 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Sigma70_r4 PF04545.16 gi|150399946|ref|YP_001323713.1| - 0.15 11.6 0.0 0.27 10.8 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_20 PF12840.7 gi|150399946|ref|YP_001323713.1| - 0.22 11.6 0.0 0.47 10.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Radical_SAM PF04055.21 gi|150399947|ref|YP_001323714.1| - 2.1e-08 34.8 1.6 3.4e-07 30.8 1.6 2.4 1 1 0 1 1 1 1 Radical SAM superfamily UPF0113 PF03657.13 gi|150399948|ref|YP_001323715.1| - 3.2e-20 72.2 1.0 8.2e-20 70.9 1.0 1.7 1 0 0 1 1 1 1 UPF0113 PUA domain UPF0113_N PF17833.1 gi|150399948|ref|YP_001323715.1| - 3.8e-11 43.4 1.0 3.8e-11 43.4 1.0 1.8 2 1 0 2 2 2 1 UPF0113 Pre-PUA domain Methyltranf_PUA PF13636.6 gi|150399948|ref|YP_001323715.1| - 0.006 16.5 0.2 0.015 15.3 0.2 1.8 1 1 0 1 1 1 1 RNA-binding PUA-like domain of methyltransferase RsmF A2M_recep PF07677.14 gi|150399949|ref|YP_001323716.1| - 0.035 14.8 0.9 0.5 11.1 0.1 2.4 2 0 0 2 2 2 0 A-macroglobulin receptor binding domain TruD PF01142.18 gi|150399950|ref|YP_001323717.1| - 2.1e-73 247.5 1.9 3.1e-73 247.0 1.9 1.2 1 1 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) DUF5617 PF18493.1 gi|150399950|ref|YP_001323717.1| - 0.017 15.2 0.8 0.079 13.1 0.8 2.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) P4Ha_N PF08336.11 gi|150399950|ref|YP_001323717.1| - 6 6.9 6.8 8.9 6.3 0.2 2.7 2 1 0 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Lyase_1 PF00206.20 gi|150399951|ref|YP_001323718.1| - 1.5e-62 211.8 0.3 2.2e-62 211.3 0.3 1.2 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|150399951|ref|YP_001323718.1| - 6.9e-17 62.0 0.0 2.8e-16 60.0 0.0 2.1 1 0 0 1 1 1 1 Argininosuccinate lyase C-terminal DUF1002 PF06207.11 gi|150399951|ref|YP_001323718.1| - 0.024 14.2 0.5 0.086 12.4 0.5 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) ASL_C PF08328.11 gi|150399951|ref|YP_001323718.1| - 0.11 12.7 0.4 0.46 10.6 0.3 2.2 1 1 0 1 1 1 0 Adenylosuccinate lyase C-terminal CoA_binding_2 PF13380.6 gi|150399952|ref|YP_001323719.1| - 3.7e-26 91.9 0.0 4.4e-26 91.7 0.0 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|150399952|ref|YP_001323719.1| - 3.6e-07 30.8 0.0 4.6e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 CoA binding domain AIM24 PF01987.17 gi|150399953|ref|YP_001323720.1| - 1.9e-35 122.5 0.2 2.5e-35 122.1 0.2 1.1 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DNA_primase_lrg PF04104.14 gi|150399954|ref|YP_001323721.1| - 3.9e-28 98.6 0.5 8.3e-28 97.5 0.5 1.5 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Metallophos PF00149.28 gi|150399955|ref|YP_001323722.1| - 3.3e-11 44.1 1.0 3.3e-11 44.1 1.0 2.3 3 1 1 4 4 4 1 Calcineurin-like phosphoesterase DNA_pol_E_B PF04042.16 gi|150399955|ref|YP_001323722.1| - 1.8e-10 40.5 0.0 3.5e-10 39.6 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.7 gi|150399955|ref|YP_001323722.1| - 6.5e-06 26.4 0.0 1.6e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PcrB PF01884.17 gi|150399956|ref|YP_001323723.1| - 6.1e-73 245.0 2.3 7.6e-73 244.7 2.3 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|150399956|ref|YP_001323723.1| - 2.8e-06 27.0 0.3 1.1e-05 25.0 0.1 1.9 2 0 0 2 2 2 1 Histidine biosynthesis protein DHO_dh PF01180.21 gi|150399956|ref|YP_001323723.1| - 0.0018 17.5 0.7 0.0097 15.1 0.1 2.0 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase MoCF_biosynth PF00994.24 gi|150399956|ref|YP_001323723.1| - 0.0037 16.9 0.0 0.012 15.3 0.0 1.8 2 0 0 2 2 2 1 Probable molybdopterin binding domain NanE PF04131.14 gi|150399956|ref|YP_001323723.1| - 0.0069 15.6 0.2 0.64 9.2 0.1 2.7 3 0 0 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|150399956|ref|YP_001323723.1| - 0.048 13.0 0.2 0.82 8.9 0.0 2.0 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG DHQS PF01959.16 gi|150399958|ref|YP_001323725.1| - 2.4e-140 467.4 2.8 2.7e-140 467.3 2.8 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II DUF1953 PF09196.10 gi|150399958|ref|YP_001323725.1| - 0.0067 16.2 0.5 0.096 12.5 0.1 2.5 1 1 1 2 2 2 1 Domain of unknown function (DUF1953) DUF2111 PF09884.9 gi|150399958|ref|YP_001323725.1| - 0.054 13.6 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2111) Intein_splicing PF14890.6 gi|150399958|ref|YP_001323725.1| - 0.26 11.2 1.3 3.9 7.4 0.0 3.1 2 2 0 2 2 2 0 Intein splicing domain DUF2254 PF10011.9 gi|150399959|ref|YP_001323726.1| - 3.1e-10 39.4 0.6 4.4e-10 38.9 0.6 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) RIO1 PF01163.22 gi|150399960|ref|YP_001323727.1| - 3.5e-40 137.6 1.1 2.7e-39 134.7 0.1 2.4 2 1 0 2 2 2 1 RIO1 family Rio2_N PF09202.11 gi|150399960|ref|YP_001323727.1| - 2.7e-18 65.9 0.1 6.5e-18 64.7 0.1 1.7 1 0 0 1 1 1 1 Rio2, N-terminal APH PF01636.23 gi|150399960|ref|YP_001323727.1| - 6.5e-06 26.2 0.2 0.00072 19.5 0.0 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase PF00069.25 gi|150399960|ref|YP_001323727.1| - 1.3e-05 24.8 0.7 0.0001 21.8 0.7 2.0 1 1 0 1 1 1 1 Protein kinase domain Choline_kinase PF01633.20 gi|150399960|ref|YP_001323727.1| - 0.012 15.2 0.1 0.021 14.4 0.1 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 gi|150399960|ref|YP_001323727.1| - 0.054 12.8 0.1 0.64 9.3 0.1 2.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family POR_N PF01855.19 gi|150399961|ref|YP_001323728.1| - 8.6e-77 258.0 0.1 1.1e-76 257.7 0.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|150399961|ref|YP_001323728.1| - 5.9e-19 68.3 0.0 1.3e-18 67.2 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|150399961|ref|YP_001323728.1| - 0.0021 17.7 0.3 0.0073 15.9 0.2 1.8 1 1 1 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.20 gi|150399961|ref|YP_001323728.1| - 0.021 14.7 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 Transketolase, C-terminal domain SelA PF03841.13 gi|150399962|ref|YP_001323729.1| - 1.4e-08 34.2 0.1 2.2e-08 33.5 0.1 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_1_2 PF00155.21 gi|150399962|ref|YP_001323729.1| - 6.5e-06 25.5 0.0 1.3e-05 24.5 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|150399962|ref|YP_001323729.1| - 0.012 14.1 0.0 0.019 13.5 0.0 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Vps23_core PF09454.10 gi|150399962|ref|YP_001323729.1| - 0.012 15.5 0.1 0.98 9.4 0.1 2.8 3 0 0 3 3 3 0 Vps23 core domain DUF2098 PF09871.9 gi|150399963|ref|YP_001323730.1| - 1.7e-15 57.1 0.1 1.8e-15 57.0 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) YdfZ PF14001.6 gi|150399963|ref|YP_001323730.1| - 0.0017 18.7 0.3 0.0062 16.9 0.2 1.9 2 1 0 2 2 2 1 YdfZ protein N1221 PF07923.13 gi|150399963|ref|YP_001323730.1| - 0.027 13.7 0.0 0.029 13.5 0.0 1.0 1 0 0 1 1 1 0 N1221-like protein Na_H_Exchanger PF00999.21 gi|150399964|ref|YP_001323731.1| - 1.5e-55 188.5 56.8 1.9e-55 188.2 56.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|150399964|ref|YP_001323731.1| - 1.4e-22 80.1 1.0 2.2e-22 79.5 0.2 1.8 2 0 0 2 2 2 1 TrkA-N domain RBD-FIP PF09457.10 gi|150399964|ref|YP_001323731.1| - 0.0053 16.6 0.1 0.017 15.0 0.1 1.8 1 0 0 1 1 1 1 FIP domain Acetyltransf_1 PF00583.25 gi|150399965|ref|YP_001323732.1| - 2.8e-05 24.3 0.0 0.00032 20.9 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|150399965|ref|YP_001323732.1| - 0.00032 20.6 0.0 0.0022 17.9 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|150399965|ref|YP_001323732.1| - 0.047 13.8 2.8 0.067 13.3 0.2 2.2 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain LAM_C PF12544.8 gi|150399966|ref|YP_001323733.1| - 4.2e-40 136.8 0.0 9.2e-40 135.7 0.0 1.6 1 0 0 1 1 1 1 Lysine-2,3-aminomutase Radical_SAM PF04055.21 gi|150399966|ref|YP_001323733.1| - 1.6e-12 48.1 0.4 1.6e-11 44.9 0.0 2.5 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|150399966|ref|YP_001323733.1| - 2.2e-07 31.2 0.0 3e-05 24.3 0.0 2.4 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|150399966|ref|YP_001323733.1| - 5.4e-07 29.8 0.6 2.6e-05 24.4 0.0 3.0 3 0 0 3 3 3 1 4Fe-4S single cluster domain CRPA PF05745.11 gi|150399967|ref|YP_001323734.1| - 0.058 13.4 0.2 0.058 13.4 0.2 1.9 1 1 1 2 2 2 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) EF-1_beta_acid PF10587.9 gi|150399967|ref|YP_001323734.1| - 0.24 11.9 5.0 0.4 11.2 5.0 1.4 1 0 0 1 1 1 0 Eukaryotic elongation factor 1 beta central acidic region DUF4131 PF13567.6 gi|150399967|ref|YP_001323734.1| - 1.9 8.1 3.7 1 9.0 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) MatE PF01554.18 gi|150399968|ref|YP_001323735.1| - 9.1e-39 132.7 49.1 2.8e-26 92.1 14.2 3.1 3 1 1 4 4 4 2 MatE Polysacc_synt_C PF14667.6 gi|150399968|ref|YP_001323735.1| - 1.1e-05 25.5 7.5 1.1e-05 25.5 7.5 5.1 2 1 2 5 5 5 3 Polysaccharide biosynthesis C-terminal domain UPF0242 PF06785.11 gi|150399968|ref|YP_001323735.1| - 0.84 9.7 2.5 15 5.6 0.1 2.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Aldo_ket_red PF00248.21 gi|150399969|ref|YP_001323736.1| - 3.3e-40 138.1 1.3 6.8e-39 133.8 0.9 2.3 1 1 1 2 2 2 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|150399969|ref|YP_001323736.1| - 2.7e-10 40.6 9.0 2.7e-10 40.6 9.0 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150399969|ref|YP_001323736.1| - 1.5e-09 37.9 8.4 3.3e-09 36.8 8.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150399969|ref|YP_001323736.1| - 6e-07 29.5 4.9 0.00039 20.5 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150399969|ref|YP_001323736.1| - 3.4e-06 27.4 7.8 9.7e-06 26.0 7.8 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150399969|ref|YP_001323736.1| - 0.00069 19.8 10.0 0.035 14.3 0.5 3.1 2 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150399969|ref|YP_001323736.1| - 0.0023 17.7 16.2 0.0024 17.6 3.0 2.8 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|150399969|ref|YP_001323736.1| - 0.0074 17.2 7.4 0.2 12.6 2.5 2.9 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_20 PF14691.6 gi|150399969|ref|YP_001323736.1| - 0.017 14.9 0.4 0.017 14.9 0.4 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_2 PF12797.7 gi|150399969|ref|YP_001323736.1| - 0.037 14.1 13.9 0.04 14.0 3.5 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150399969|ref|YP_001323736.1| - 0.046 13.8 2.5 0.046 13.8 2.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|150399969|ref|YP_001323736.1| - 0.11 13.0 15.5 1.1 10.0 15.7 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Tiam_CC_Ex PF18385.1 gi|150399969|ref|YP_001323736.1| - 0.13 12.7 0.1 0.32 11.4 0.1 1.6 1 0 0 1 1 1 0 T-lymphoma invasion and metastasis CC-Ex domain Fer4_22 PF17179.4 gi|150399969|ref|YP_001323736.1| - 0.14 13.0 13.5 0.33 11.8 1.7 3.5 2 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150399969|ref|YP_001323736.1| - 0.45 10.7 9.7 0.94 9.7 2.0 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150399969|ref|YP_001323736.1| - 0.6 10.7 16.7 0.08 13.5 4.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain HGTP_anticodon PF03129.20 gi|150399970|ref|YP_001323737.1| - 7.5e-23 80.5 0.1 2.3e-22 78.9 0.1 1.9 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|150399970|ref|YP_001323737.1| - 5.2e-09 36.3 0.4 3.2e-08 33.7 0.4 2.1 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Zn-ribbon_8 PF09723.10 gi|150399970|ref|YP_001323737.1| - 0.0017 18.4 1.5 0.021 14.9 0.1 3.0 3 0 0 3 3 3 1 Zinc ribbon domain tRNA-synt_2 PF00152.20 gi|150399970|ref|YP_001323737.1| - 0.024 13.7 6.5 2.8 6.9 5.3 3.0 2 1 0 2 2 2 0 tRNA synthetases class II (D, K and N) FTCD_C PF04961.12 gi|150399970|ref|YP_001323737.1| - 0.065 13.0 0.3 0.12 12.1 0.3 1.4 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase zf-C2HC_2 PF13913.6 gi|150399970|ref|YP_001323737.1| - 0.6 10.1 4.6 5.8 6.9 0.0 3.0 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 gi|150399970|ref|YP_001323737.1| - 1.3 10.1 2.8 16 6.6 0.1 3.5 3 0 0 3 3 3 0 C2H2-type zinc finger Rad50_zn_hook PF04423.14 gi|150399970|ref|YP_001323737.1| - 1.3 8.9 8.0 0.24 11.2 0.2 3.0 3 0 0 3 3 3 0 Rad50 zinc hook motif zf-H2C2_2 PF13465.6 gi|150399970|ref|YP_001323737.1| - 1.9 9.1 4.2 20 5.9 0.1 3.1 3 0 0 3 3 3 0 Zinc-finger double domain CitG PF01874.16 gi|150399971|ref|YP_001323738.1| - 2.4e-56 191.5 0.0 2.7e-56 191.3 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase Ham1p_like PF01725.16 gi|150399972|ref|YP_001323739.1| - 6.5e-47 159.9 0.1 7.2e-47 159.7 0.1 1.0 1 0 0 1 1 1 1 Ham1 family DUF4720 PF15846.5 gi|150399972|ref|YP_001323739.1| - 0.048 13.5 0.0 0.081 12.8 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4720) HTH_45 PF14947.6 gi|150399973|ref|YP_001323740.1| - 4.2e-07 29.9 0.6 7.8e-07 29.0 0.5 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|150399973|ref|YP_001323740.1| - 0.047 13.4 0.2 0.3 10.8 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4364) E1-E2_ATPase PF00122.20 gi|150399974|ref|YP_001323741.1| - 7.4e-49 165.7 2.1 8.1e-48 162.3 0.0 2.7 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 gi|150399974|ref|YP_001323741.1| - 1.3e-28 100.8 0.0 2e-28 100.2 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|150399974|ref|YP_001323741.1| - 0.28 10.9 6.2 0.39 10.4 0.2 2.8 2 1 1 3 3 3 0 haloacid dehalogenase-like hydrolase HTH_5 PF01022.20 gi|150399975|ref|YP_001323742.1| - 1.6e-15 56.7 1.7 2.9e-15 55.9 1.7 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|150399975|ref|YP_001323742.1| - 1.3e-06 28.3 0.0 1.8e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Pox_A31 PF05771.11 gi|150399975|ref|YP_001323742.1| - 0.003 17.6 0.4 2.7 8.0 0.5 2.0 1 1 1 2 2 2 2 Poxvirus A31 protein HTH_24 PF13412.6 gi|150399975|ref|YP_001323742.1| - 0.0073 15.8 0.7 0.013 15.0 0.7 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|150399975|ref|YP_001323742.1| - 0.0091 15.9 0.5 0.017 15.0 0.1 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|150399975|ref|YP_001323742.1| - 0.031 14.1 1.0 0.084 12.7 0.7 1.9 1 1 0 1 1 1 0 TFIIE alpha subunit DHH PF01368.20 gi|150399976|ref|YP_001323743.1| - 5.3e-25 87.6 0.0 9.4e-25 86.8 0.0 1.4 1 0 0 1 1 1 1 DHH family DHHA2 PF02833.14 gi|150399976|ref|YP_001323743.1| - 7.7e-19 68.3 0.2 1.3e-18 67.6 0.2 1.4 1 0 0 1 1 1 1 DHHA2 domain DUF2100 PF09873.9 gi|150399976|ref|YP_001323743.1| - 0.057 13.3 3.8 2.5 7.9 0.0 3.0 3 1 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2100) DUF5379 PF17350.2 gi|150399978|ref|YP_001323745.1| - 4e-42 142.4 11.7 4.5e-42 142.3 11.7 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5379) DUF3267 PF11667.8 gi|150399978|ref|YP_001323745.1| - 0.031 14.6 5.4 0.83 10.0 5.4 2.0 1 1 0 1 1 1 0 Putative zincin peptidase Aminotran_3 PF00202.21 gi|150399979|ref|YP_001323746.1| - 1.2e-71 241.6 0.0 1.6e-71 241.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|150399979|ref|YP_001323746.1| - 0.022 13.9 0.0 0.034 13.3 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class I and II TrbI PF03743.14 gi|150399979|ref|YP_001323746.1| - 0.13 12.1 0.1 0.23 11.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial conjugation TrbI-like protein DNA_alkylation PF08713.11 gi|150399980|ref|YP_001323747.1| - 3.3e-56 190.4 0.0 3.8e-56 190.2 0.0 1.0 1 0 0 1 1 1 1 DNA alkylation repair enzyme MMS22L_N PF14910.6 gi|150399980|ref|YP_001323747.1| - 0.0083 14.6 0.0 0.012 14.1 0.0 1.2 1 0 0 1 1 1 1 S-phase genomic integrity recombination mediator, N-terminal Sulfotransfer_4 PF17784.1 gi|150399980|ref|YP_001323747.1| - 0.025 14.4 0.1 0.035 14.0 0.1 1.3 1 0 0 1 1 1 0 Sulfotransferase domain Fe-ADH_2 PF13685.6 gi|150399981|ref|YP_001323748.1| - 8e-54 183.0 0.0 2.1e-51 175.0 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|150399981|ref|YP_001323748.1| - 3.8e-15 55.6 0.5 1.5e-13 50.4 0.5 2.9 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|150399981|ref|YP_001323748.1| - 6.7e-06 25.4 0.1 0.00013 21.2 0.0 2.6 2 1 0 2 2 2 1 3-dehydroquinate synthase QueC PF06508.13 gi|150399982|ref|YP_001323749.1| - 1.6e-61 207.5 0.0 1.8e-61 207.3 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|150399982|ref|YP_001323749.1| - 1.7e-05 24.7 0.0 2.5e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.14 gi|150399982|ref|YP_001323749.1| - 0.00012 21.7 0.1 0.0041 16.7 0.1 2.3 3 0 0 3 3 3 1 Thiamine biosynthesis protein (ThiI) NAD_synthase PF02540.17 gi|150399982|ref|YP_001323749.1| - 0.00089 18.4 0.1 0.0013 17.9 0.1 1.3 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|150399982|ref|YP_001323749.1| - 0.033 13.0 0.0 0.046 12.5 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase ATP_bind_3 PF01171.20 gi|150399982|ref|YP_001323749.1| - 0.12 12.1 0.0 0.61 9.8 0.0 1.9 2 0 0 2 2 2 0 PP-loop family NRDD PF13597.6 gi|150399983|ref|YP_001323750.1| - 1.1e-166 555.9 1.9 1.7e-166 555.3 1.9 1.2 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase ATP-cone PF03477.16 gi|150399983|ref|YP_001323750.1| - 2.3e-16 60.1 3.9 3.8e-07 30.6 0.0 3.0 3 0 0 3 3 3 2 ATP cone domain Inhibitor_G39P PF11417.8 gi|150399983|ref|YP_001323750.1| - 0.091 13.3 1.2 0.34 11.5 0.3 2.4 2 0 0 2 2 2 0 Loader and inhibitor of phage G40P TRM PF02005.16 gi|150399984|ref|YP_001323751.1| - 9.1e-102 341.0 0.0 1.1e-101 340.7 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_31 PF13847.6 gi|150399984|ref|YP_001323751.1| - 0.00015 21.6 0.0 0.00056 19.7 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|150399984|ref|YP_001323751.1| - 0.0027 17.3 0.1 0.12 12.0 0.0 2.3 1 1 0 2 2 2 1 Methyltransferase small domain Met_10 PF02475.16 gi|150399984|ref|YP_001323751.1| - 0.0063 16.3 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|150399984|ref|YP_001323751.1| - 0.031 13.9 0.2 0.81 9.3 0.0 2.3 1 1 1 2 2 2 0 Conserved hypothetical protein 95 Ubie_methyltran PF01209.18 gi|150399984|ref|YP_001323751.1| - 0.1 11.9 0.0 0.3 10.4 0.0 1.7 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family HD PF01966.22 gi|150399985|ref|YP_001323752.1| - 1.3e-12 48.0 0.3 2.3e-12 47.2 0.3 1.4 1 0 0 1 1 1 1 HD domain TraI_2 PF07514.11 gi|150399985|ref|YP_001323752.1| - 9.7e-06 24.7 0.1 1.9e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 Putative helicase zf-like PF04071.12 gi|150399986|ref|YP_001323753.1| - 1.2e-28 98.9 10.1 1.5e-28 98.5 9.7 1.4 1 1 0 1 1 1 1 Cysteine-rich small domain CUB PF00431.20 gi|150399986|ref|YP_001323753.1| - 0.17 12.2 0.1 0.17 12.2 0.1 2.0 2 0 0 2 2 2 0 CUB domain Arc_PepC PF06819.11 gi|150399987|ref|YP_001323754.1| - 3.1e-34 117.5 2.6 5.6e-34 116.6 2.6 1.4 1 0 0 1 1 1 1 Archaeal Peptidase A24 C-terminal Domain Peptidase_A24 PF01478.18 gi|150399987|ref|YP_001323754.1| - 1.9e-06 28.2 16.2 1.9e-06 28.2 16.2 3.0 2 1 1 3 3 3 1 Type IV leader peptidase family Arc_PepC_II PF06847.11 gi|150399987|ref|YP_001323754.1| - 0.094 13.2 0.1 0.094 13.2 0.1 2.9 3 0 0 3 3 3 0 Archaeal Peptidase A24 C-terminus Type II Class_IIIsignal PF04021.12 gi|150399988|ref|YP_001323755.1| - 5.9e-08 32.4 1.7 5.9e-08 32.4 1.7 1.7 2 0 0 2 2 2 1 Class III signal peptide HlyD_3 PF13437.6 gi|150399988|ref|YP_001323755.1| - 0.15 12.7 0.0 0.25 12.0 0.0 1.3 1 0 0 1 1 1 0 HlyD family secretion protein DUF515 PF04415.12 gi|150399989|ref|YP_001323756.1| - 2.9e-114 381.9 27.5 4.9e-111 371.3 27.5 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF515) GA PF01468.17 gi|150399989|ref|YP_001323756.1| - 0.00011 22.4 2.5 0.026 14.8 0.1 2.8 2 0 0 2 2 2 2 GA module ZapB PF06005.12 gi|150399989|ref|YP_001323756.1| - 0.42 11.1 2.6 3.1 8.3 1.7 2.5 2 0 0 2 2 2 0 Cell division protein ZapB Class_IIIsignal PF04021.12 gi|150399991|ref|YP_001323758.1| - 5.4e-10 38.9 0.8 8.8e-10 38.2 0.8 1.4 1 0 0 1 1 1 1 Class III signal peptide Imm8 PF15586.6 gi|150399991|ref|YP_001323758.1| - 0.1 12.6 0.0 0.2 11.7 0.0 1.5 1 1 0 1 1 1 0 Immunity protein 8 TadF PF16964.5 gi|150399992|ref|YP_001323759.1| - 0.14 11.9 1.6 0.23 11.2 1.6 1.3 1 0 0 1 1 1 0 Putative tight adherence pilin protein F DUF2341 PF10102.9 gi|150399994|ref|YP_001323761.1| - 4.4e-16 59.2 4.5 4.4e-16 59.2 4.5 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF2341) NOT2_3_5 PF04153.18 gi|150399994|ref|YP_001323761.1| - 0.053 13.6 1.7 0.19 11.8 1.7 2.0 1 0 0 1 1 1 0 NOT2 / NOT3 / NOT5 family DUF2393 PF09624.10 gi|150399994|ref|YP_001323761.1| - 2.2 8.2 8.3 4.3 7.3 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2393) DUF2341 PF10102.9 gi|150399996|ref|YP_001323763.1| - 5.2e-17 62.2 2.7 5.2e-17 62.2 2.7 3.4 4 0 0 4 4 4 1 Domain of unknown function (DUF2341) DHNA PF04038.12 gi|150399998|ref|YP_001323765.1| - 7.6e-37 126.1 0.0 9.2e-37 125.9 0.0 1.1 1 0 0 1 1 1 1 Dihydroneopterin aldolase DHH PF01368.20 gi|150399999|ref|YP_001323766.1| - 5.7e-19 68.2 0.7 1e-18 67.5 0.1 1.7 2 0 0 2 2 2 1 DHH family DHHA1 PF02272.19 gi|150399999|ref|YP_001323766.1| - 8.4e-16 58.6 0.6 1.9e-15 57.5 0.2 1.9 2 0 0 2 2 2 1 DHHA1 domain Prefoldin_2 PF01920.20 gi|150400000|ref|YP_001323767.1| - 1.3e-26 92.6 24.4 1.4e-26 92.5 24.4 1.0 1 0 0 1 1 1 1 Prefoldin subunit BLOC1_2 PF10046.9 gi|150400000|ref|YP_001323767.1| - 3.2e-05 24.1 13.9 0.023 15.0 2.7 2.1 2 0 0 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Spc7 PF08317.11 gi|150400000|ref|YP_001323767.1| - 0.00095 18.1 13.2 0.0016 17.4 1.3 2.0 2 0 0 2 2 2 1 Spc7 kinetochore protein FlaC_arch PF05377.11 gi|150400000|ref|YP_001323767.1| - 0.0033 17.8 15.3 0.006 17.0 3.4 2.4 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) CENP-F_leu_zip PF10473.9 gi|150400000|ref|YP_001323767.1| - 0.0067 16.5 17.1 0.031 14.3 3.5 2.1 2 0 0 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Nsp1_C PF05064.13 gi|150400000|ref|YP_001323767.1| - 0.028 14.2 4.8 0.028 14.2 4.8 2.1 2 0 0 2 2 2 0 Nsp1-like C-terminal region Peptidase_C47 PF05543.13 gi|150400000|ref|YP_001323767.1| - 0.11 12.1 1.5 0.13 11.8 1.3 1.2 1 1 0 1 1 1 0 Staphopain peptidase C47 EspB PF05802.11 gi|150400000|ref|YP_001323767.1| - 0.11 12.5 8.2 0.049 13.6 5.4 1.7 1 1 1 2 2 2 0 Enterobacterial EspB protein CLZ PF16526.5 gi|150400000|ref|YP_001323767.1| - 0.15 12.4 13.9 0.14 12.6 2.8 2.3 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4407 PF14362.6 gi|150400000|ref|YP_001323767.1| - 0.17 11.2 6.2 0.23 10.8 6.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SNF2_N PF00176.23 gi|150400000|ref|YP_001323767.1| - 0.19 10.4 5.2 0.23 10.2 5.2 1.0 1 0 0 1 1 1 0 SNF2 family N-terminal domain DUF87 PF01935.17 gi|150400000|ref|YP_001323767.1| - 0.26 11.3 4.2 0.32 11.1 4.2 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain TPR_MLP1_2 PF07926.12 gi|150400000|ref|YP_001323767.1| - 0.29 11.2 18.9 1.2 9.2 4.7 2.1 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF1664 PF07889.12 gi|150400000|ref|YP_001323767.1| - 0.41 10.7 13.5 2.6 8.1 2.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4201 PF13870.6 gi|150400000|ref|YP_001323767.1| - 0.5 10.1 19.8 8.9 6.0 20.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) HemX PF04375.14 gi|150400000|ref|YP_001323767.1| - 0.58 9.4 19.4 3.3 6.9 19.4 1.8 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase FliD_C PF07195.12 gi|150400000|ref|YP_001323767.1| - 0.59 9.5 12.7 1 8.7 0.5 2.0 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Fib_alpha PF08702.10 gi|150400000|ref|YP_001323767.1| - 0.61 10.3 14.2 1.4 9.1 14.2 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ABC1 PF03109.16 gi|150400000|ref|YP_001323767.1| - 0.85 9.8 8.2 0.79 9.9 0.9 2.0 1 1 1 2 2 2 0 ABC1 family Peptidase_U57 PF05582.12 gi|150400000|ref|YP_001323767.1| - 0.95 8.7 6.9 1.2 8.4 6.9 1.0 1 0 0 1 1 1 0 YabG peptidase U57 DUF4795 PF16043.5 gi|150400000|ref|YP_001323767.1| - 0.99 9.0 19.8 3.1 7.4 19.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Cortex-I_coil PF09304.10 gi|150400000|ref|YP_001323767.1| - 1 9.6 14.3 1.1 9.5 3.9 2.1 1 1 1 2 2 2 0 Cortexillin I, coiled coil Tektin PF03148.14 gi|150400000|ref|YP_001323767.1| - 1.1 8.0 17.2 1.7 7.3 5.3 2.0 2 0 0 2 2 2 0 Tektin family Exonuc_VII_L PF02601.15 gi|150400000|ref|YP_001323767.1| - 1.1 8.7 8.3 1.4 8.4 8.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4298 PF14131.6 gi|150400000|ref|YP_001323767.1| - 1.1 9.2 11.3 0.98 9.4 2.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) GrpE PF01025.19 gi|150400000|ref|YP_001323767.1| - 1.3 8.7 15.0 1.9 8.2 1.8 2.0 2 0 0 2 2 2 0 GrpE Rotamase PF00639.21 gi|150400000|ref|YP_001323767.1| - 1.4 9.9 7.5 0.25 12.3 2.6 1.9 1 1 1 2 2 2 0 PPIC-type PPIASE domain Atg14 PF10186.9 gi|150400000|ref|YP_001323767.1| - 1.4 7.9 7.4 2 7.4 7.4 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Ribosomal_S20p PF01649.18 gi|150400000|ref|YP_001323767.1| - 1.4 9.6 6.6 16 6.2 1.3 2.2 1 1 1 2 2 2 0 Ribosomal protein S20 GED PF02212.18 gi|150400000|ref|YP_001323767.1| - 1.6 8.9 14.5 0.46 10.7 2.6 2.2 1 1 1 2 2 2 0 Dynamin GTPase effector domain AMP-binding_C_2 PF14535.6 gi|150400000|ref|YP_001323767.1| - 1.7 9.0 8.7 3.6 8.0 8.7 1.6 1 1 0 1 1 1 0 AMP-binding enzyme C-terminal domain DUF919 PF06034.11 gi|150400000|ref|YP_001323767.1| - 2 8.3 14.6 0.061 13.2 5.5 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) ApoLp-III PF07464.11 gi|150400000|ref|YP_001323767.1| - 2 8.5 19.4 3.1e+02 1.4 19.4 2.1 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DUF4200 PF13863.6 gi|150400000|ref|YP_001323767.1| - 2 8.8 25.7 0.22 11.9 9.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) Jnk-SapK_ap_N PF09744.9 gi|150400000|ref|YP_001323767.1| - 2.2 8.5 20.9 4.7 7.4 20.9 1.5 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 PRP1_N PF06424.12 gi|150400000|ref|YP_001323767.1| - 2.2 8.7 13.5 4.2 7.8 13.5 1.4 1 1 0 1 1 1 0 PRP1 splicing factor, N-terminal DUF3287 PF11690.8 gi|150400000|ref|YP_001323767.1| - 2.2 8.0 7.7 7.7 6.3 1.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3287) Peptidase_C65 PF10275.9 gi|150400000|ref|YP_001323767.1| - 2.5 7.5 12.1 0.66 9.4 3.5 2.0 1 1 1 2 2 2 0 Peptidase C65 Otubain Prefoldin PF02996.17 gi|150400000|ref|YP_001323767.1| - 3.1 7.7 19.3 1.3e+02 2.5 19.3 2.5 1 1 0 1 1 1 0 Prefoldin subunit V_ATPase_I PF01496.19 gi|150400000|ref|YP_001323767.1| - 3.2 5.5 12.9 3.7 5.3 12.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3450 PF11932.8 gi|150400000|ref|YP_001323767.1| - 3.4 6.9 17.9 2.3 7.5 5.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) XhlA PF10779.9 gi|150400000|ref|YP_001323767.1| - 3.4 8.0 9.6 6.5 7.0 3.0 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Laminin_II PF06009.12 gi|150400000|ref|YP_001323767.1| - 3.4 7.7 10.1 57 3.7 10.2 2.1 1 1 0 1 1 1 0 Laminin Domain II FapA PF03961.13 gi|150400000|ref|YP_001323767.1| - 3.8 6.0 15.7 8 4.9 16.0 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A LMBR1 PF04791.16 gi|150400000|ref|YP_001323767.1| - 4.1 6.2 6.4 5.2 5.8 6.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein KfrA_N PF11740.8 gi|150400000|ref|YP_001323767.1| - 4.3 8.0 12.5 7.3 7.3 3.5 2.1 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term Spore_II_R PF09551.10 gi|150400000|ref|YP_001323767.1| - 4.6 7.7 8.1 5.5 7.5 2.1 2.0 2 0 0 2 2 2 0 Stage II sporulation protein R (spore_II_R) DUF4618 PF15397.6 gi|150400000|ref|YP_001323767.1| - 5.5 6.3 21.8 1.3 8.4 5.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) Mitoc_mL59 PF18126.1 gi|150400000|ref|YP_001323767.1| - 6.1 7.2 12.7 0.5 10.7 6.4 2.2 1 1 1 2 2 2 0 Mitochondrial ribosomal protein mL59 DUF4446 PF14584.6 gi|150400000|ref|YP_001323767.1| - 7.4 6.5 16.4 3.9 7.4 4.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) YabA PF06156.13 gi|150400000|ref|YP_001323767.1| - 7.8 7.2 17.0 6.2e+02 1.1 17.0 2.2 1 1 0 1 1 1 0 Initiation control protein YabA FAM76 PF16046.5 gi|150400000|ref|YP_001323767.1| - 8.1 5.7 13.0 12 5.1 13.0 1.3 1 0 0 1 1 1 0 FAM76 protein ATG16 PF08614.11 gi|150400000|ref|YP_001323767.1| - 8.4 6.6 19.2 2 8.6 5.9 1.9 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Med4 PF10018.9 gi|150400000|ref|YP_001323767.1| - 9.3 5.9 13.5 1.2 8.8 7.3 2.0 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 OmpH PF03938.14 gi|150400000|ref|YP_001323767.1| - 9.9 6.5 27.8 18 5.7 27.8 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Pcc1 PF09341.10 gi|150400001|ref|YP_001323768.1| - 2.4e-08 34.0 0.0 2.6e-08 33.9 0.0 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 Brix PF04427.18 gi|150400002|ref|YP_001323769.1| - 0.076 13.1 0.2 0.11 12.6 0.2 1.6 1 1 0 1 1 1 0 Brix domain Zn-ribbon_8 PF09723.10 gi|150400003|ref|YP_001323770.1| - 9.5e-06 25.6 0.4 1.4e-05 25.1 0.4 1.2 1 0 0 1 1 1 1 Zinc ribbon domain zf-C2HC5 PF06221.13 gi|150400003|ref|YP_001323770.1| - 3.4e-05 23.7 0.5 4.1e-05 23.5 0.5 1.1 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type zf-ribbon_3 PF13248.6 gi|150400003|ref|YP_001323770.1| - 6.5e-05 22.2 1.3 0.013 14.9 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|150400003|ref|YP_001323770.1| - 0.00019 21.0 2.4 0.00044 19.9 2.4 1.6 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit Desulfoferrod_N PF06397.12 gi|150400003|ref|YP_001323770.1| - 0.00032 20.3 2.8 0.0077 15.8 0.3 2.1 1 1 1 2 2 2 1 Desulfoferrodoxin, N-terminal domain zf-NADH-PPase PF09297.11 gi|150400003|ref|YP_001323770.1| - 0.00062 19.4 0.4 0.00083 19.0 0.4 1.2 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain HypA PF01155.19 gi|150400003|ref|YP_001323770.1| - 0.001 19.1 0.4 0.001 19.1 0.4 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|150400003|ref|YP_001323770.1| - 0.0042 16.6 1.4 0.42 10.2 0.1 2.2 2 0 0 2 2 2 1 TFIIB zinc-binding Lar_restr_allev PF14354.6 gi|150400003|ref|YP_001323770.1| - 0.0045 17.3 0.4 0.12 12.8 0.0 2.0 1 1 1 2 2 2 1 Restriction alleviation protein Lar zf-LITAF-like PF10601.9 gi|150400003|ref|YP_001323770.1| - 0.0047 17.2 0.5 1.8 8.9 0.1 2.1 2 0 0 2 2 2 2 LITAF-like zinc ribbon domain NOB1_Zn_bind PF08772.11 gi|150400003|ref|YP_001323770.1| - 0.0049 17.0 0.5 0.0057 16.8 0.5 1.2 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like DUF1451 PF07295.11 gi|150400003|ref|YP_001323770.1| - 0.0061 16.6 0.8 0.0069 16.4 0.8 1.1 1 0 0 1 1 1 1 Zinc-ribbon containing domain Zn_ribbon_SprT PF17283.2 gi|150400003|ref|YP_001323770.1| - 0.0066 16.3 2.2 1.5 8.8 0.1 2.1 2 0 0 2 2 2 2 SprT-like zinc ribbon domain zf-RING_7 PF02591.15 gi|150400003|ref|YP_001323770.1| - 0.0092 16.1 2.5 3.9 7.7 0.1 3.0 3 0 0 3 3 3 1 C4-type zinc ribbon domain RNHCP PF12647.7 gi|150400003|ref|YP_001323770.1| - 0.011 15.7 0.4 0.011 15.7 0.4 1.1 1 0 0 1 1 1 0 RNHCP domain zf_UBZ PF18439.1 gi|150400003|ref|YP_001323770.1| - 0.011 15.3 0.8 0.72 9.5 0.0 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zinc-ribbons_6 PF07191.12 gi|150400003|ref|YP_001323770.1| - 0.012 15.6 0.4 0.014 15.3 0.4 1.2 1 0 0 1 1 1 0 zinc-ribbons zinc_ribbon_2 PF13240.6 gi|150400003|ref|YP_001323770.1| - 0.012 15.3 3.1 0.88 9.4 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS91 PF14319.6 gi|150400003|ref|YP_001323770.1| - 0.014 15.4 0.4 0.014 15.4 0.4 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain Zn_Tnp_IS1595 PF12760.7 gi|150400003|ref|YP_001323770.1| - 0.019 14.9 4.6 0.11 12.5 0.2 2.1 1 1 0 2 2 2 0 Transposase zinc-ribbon domain DZR PF12773.7 gi|150400003|ref|YP_001323770.1| - 0.031 14.3 2.2 0.42 10.7 2.6 1.8 1 1 0 1 1 1 0 Double zinc ribbon zf-ISL3 PF14690.6 gi|150400003|ref|YP_001323770.1| - 0.057 14.1 2.6 1.2 9.9 0.5 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF951 PF06107.11 gi|150400003|ref|YP_001323770.1| - 0.059 13.3 3.6 2.8 7.9 0.6 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF951) zf-HIT PF04438.16 gi|150400003|ref|YP_001323770.1| - 0.063 13.2 3.9 0.39 10.6 0.2 2.1 2 0 0 2 2 2 0 HIT zinc finger TFIIS_C PF01096.18 gi|150400003|ref|YP_001323770.1| - 0.073 12.9 2.0 6.8 6.6 0.2 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) CpXC PF14353.6 gi|150400003|ref|YP_001323770.1| - 0.075 13.1 1.2 7.7 6.6 0.1 2.1 1 1 1 2 2 2 0 CpXC protein OrfB_Zn_ribbon PF07282.11 gi|150400003|ref|YP_001323770.1| - 0.082 12.8 1.0 0.11 12.4 1.0 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF2072 PF09845.9 gi|150400003|ref|YP_001323770.1| - 0.089 13.1 0.2 0.089 13.1 0.2 1.0 1 0 0 1 1 1 0 Zn-ribbon containing protein DUF35_N PF12172.8 gi|150400003|ref|YP_001323770.1| - 0.11 12.4 2.7 6.5 6.7 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_4 PF13717.6 gi|150400003|ref|YP_001323770.1| - 0.14 12.1 9.1 1.3 9.1 5.2 2.4 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|150400003|ref|YP_001323770.1| - 0.15 11.8 2.9 1.1 9.1 2.9 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_S27e PF01667.17 gi|150400003|ref|YP_001323770.1| - 0.25 11.1 3.3 1.8 8.3 0.2 2.1 1 1 1 2 2 2 0 Ribosomal protein S27 Rubredoxin_2 PF18073.1 gi|150400003|ref|YP_001323770.1| - 0.35 10.6 0.5 0.35 10.6 0.5 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain Ribosomal_L37ae PF01780.19 gi|150400004|ref|YP_001323771.1| - 3.6e-33 113.5 2.6 4.1e-33 113.3 2.6 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family RPA_interact_C PF14768.6 gi|150400004|ref|YP_001323771.1| - 0.029 14.9 0.0 0.035 14.7 0.0 1.2 1 0 0 1 1 1 0 Replication protein A interacting C-terminal Prok-RING_1 PF14446.6 gi|150400004|ref|YP_001323771.1| - 0.03 14.2 0.9 0.048 13.6 0.9 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Rad50_zn_hook PF04423.14 gi|150400004|ref|YP_001323771.1| - 0.034 14.0 0.2 0.069 13.0 0.2 1.5 1 0 0 1 1 1 0 Rad50 zinc hook motif TF_Zn_Ribbon PF08271.12 gi|150400004|ref|YP_001323771.1| - 0.091 12.3 1.1 0.19 11.3 1.1 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding zf-TFIIB PF13453.6 gi|150400004|ref|YP_001323771.1| - 0.13 11.7 1.6 0.4 10.1 1.6 1.8 1 1 0 1 1 1 0 Transcription factor zinc-finger PhnA_Zn_Ribbon PF08274.12 gi|150400004|ref|YP_001323771.1| - 0.18 11.8 3.1 1.5 8.8 3.1 2.0 1 1 0 1 1 1 0 PhnA Zinc-Ribbon zf-ribbon_3 PF13248.6 gi|150400004|ref|YP_001323771.1| - 0.32 10.5 3.6 3.1 7.3 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain C1_2 PF03107.16 gi|150400004|ref|YP_001323771.1| - 0.33 11.3 1.9 16 5.9 0.3 2.1 1 1 1 2 2 2 0 C1 domain zf_UBZ PF18439.1 gi|150400004|ref|YP_001323771.1| - 0.34 10.5 0.9 0.98 9.1 0.0 1.9 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-H2C2_2 PF13465.6 gi|150400004|ref|YP_001323771.1| - 0.36 11.3 4.3 1.3 9.6 0.2 2.4 3 0 0 3 3 2 0 Zinc-finger double domain Zn_ribbon_SprT PF17283.2 gi|150400004|ref|YP_001323771.1| - 0.39 10.7 2.6 0.56 10.1 1.4 1.8 1 1 1 2 2 2 0 SprT-like zinc ribbon domain Sgf11 PF08209.11 gi|150400004|ref|YP_001323771.1| - 0.54 9.9 2.6 2.5 7.7 0.0 2.5 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) Prim_Zn_Ribbon PF08273.12 gi|150400004|ref|YP_001323771.1| - 1.6 9.0 7.9 37 4.7 7.9 2.3 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase Rubredoxin PF00301.20 gi|150400004|ref|YP_001323771.1| - 1.8 8.6 5.8 5 7.2 0.4 2.5 2 1 0 2 2 2 0 Rubredoxin SBDS PF01172.18 gi|150400005|ref|YP_001323772.1| - 4.8e-22 77.8 0.0 9.8e-22 76.8 0.0 1.5 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|150400005|ref|YP_001323772.1| - 8.8e-22 77.3 0.0 1.4e-21 76.6 0.0 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain UPF0262 PF06793.12 gi|150400005|ref|YP_001323772.1| - 0.03 14.4 0.2 0.052 13.6 0.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0262) Proteasome PF00227.26 gi|150400006|ref|YP_001323773.1| - 3.8e-65 218.9 0.6 5.3e-65 218.5 0.6 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|150400006|ref|YP_001323773.1| - 3e-14 52.4 0.7 1.1e-13 50.6 0.1 2.2 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature ATP-grasp_5 PF13549.6 gi|150400008|ref|YP_001323775.1| - 3.7e-52 177.0 0.1 5.6e-52 176.4 0.1 1.2 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|150400008|ref|YP_001323775.1| - 9.2e-52 174.5 0.1 9.8e-51 171.2 0.0 2.2 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|150400008|ref|YP_001323775.1| - 1.2e-20 74.1 0.0 1.7e-19 70.4 0.0 2.8 3 0 0 3 3 3 1 CoA binding domain CoA_binding PF02629.19 gi|150400008|ref|YP_001323775.1| - 5.2e-13 49.5 0.8 1.2e-12 48.3 0.2 2.1 2 0 0 2 2 2 1 CoA binding domain Semialdhyde_dh PF01118.24 gi|150400008|ref|YP_001323775.1| - 0.0051 17.2 0.1 1.2 9.6 0.1 3.0 2 1 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Elf4 PF07011.11 gi|150400008|ref|YP_001323775.1| - 0.014 15.3 2.6 0.32 10.9 0.1 2.5 2 0 0 2 2 2 0 Early Flowering 4 domain Ligase_CoA PF00549.19 gi|150400008|ref|YP_001323775.1| - 0.025 14.4 0.0 1.9 8.3 0.0 2.6 2 0 0 2 2 2 0 CoA-ligase LAGLIDADG_WhiA PF14527.6 gi|150400008|ref|YP_001323775.1| - 0.12 12.5 0.3 13 6.0 0.0 3.5 3 0 0 3 3 3 0 WhiA LAGLIDADG-like domain Carb_kinase PF01256.17 gi|150400009|ref|YP_001323776.1| - 1.2e-44 152.7 0.0 3.4e-44 151.2 0.0 1.7 1 1 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|150400009|ref|YP_001323776.1| - 3.3e-17 62.9 0.0 6e-17 62.1 0.0 1.4 1 0 0 1 1 1 1 YjeF-related protein N-terminus PHP_C PF13263.6 gi|150400010|ref|YP_001323777.1| - 4.2e-10 39.2 0.0 1.1e-09 37.9 0.0 1.8 1 0 0 1 1 1 1 PHP-associated PHP PF02811.19 gi|150400010|ref|YP_001323777.1| - 1.3e-08 35.3 0.0 1.8e-08 34.9 0.0 1.5 1 1 0 1 1 1 1 PHP domain GATase PF00117.28 gi|150400011|ref|YP_001323778.1| - 1.6e-21 77.0 0.0 2e-21 76.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|150400011|ref|YP_001323778.1| - 7.5e-09 35.7 0.0 1e-08 35.3 0.0 1.2 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|150400011|ref|YP_001323778.1| - 0.00083 19.0 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 gi|150400011|ref|YP_001323778.1| - 0.0014 18.4 0.3 0.011 15.5 0.3 2.2 1 1 0 1 1 1 1 Peptidase C26 TBP PF00352.21 gi|150400012|ref|YP_001323779.1| - 1.2e-56 188.6 0.0 2e-28 98.2 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|150400012|ref|YP_001323779.1| - 3.5e-05 23.9 0.0 0.013 15.6 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NdhS PF11623.8 gi|150400012|ref|YP_001323779.1| - 0.002 17.8 0.0 2.5 7.8 0.0 2.4 2 0 0 2 2 2 2 NAD(P)H dehydrogenase subunit S Ribosomal_60s PF00428.19 gi|150400013|ref|YP_001323780.1| - 2.8e-12 47.0 19.3 3.7e-12 46.7 19.3 1.2 1 0 0 1 1 1 1 60s Acidic ribosomal protein UPF0236 PF06782.11 gi|150400013|ref|YP_001323780.1| - 0.065 11.9 2.0 0.078 11.6 2.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0236) EF-hand_14 PF17959.1 gi|150400013|ref|YP_001323780.1| - 0.098 13.0 0.0 0.13 12.7 0.0 1.3 1 1 0 1 1 1 0 EF-hand domain Ribosomal_L10 PF00466.20 gi|150400014|ref|YP_001323781.1| - 2.1e-21 75.9 1.2 2.1e-21 75.9 1.2 2.3 2 0 0 2 2 2 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|150400014|ref|YP_001323781.1| - 5.6e-19 67.9 0.1 1.2e-18 66.8 0.1 1.6 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|150400014|ref|YP_001323781.1| - 1.9e-06 28.4 11.6 1.9e-06 28.4 11.6 2.1 2 0 0 2 2 2 1 60s Acidic ribosomal protein Ribosomal_L1 PF00687.21 gi|150400015|ref|YP_001323782.1| - 8.2e-42 143.2 0.3 9.8e-42 143.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family RNA_pol_L_2 PF13656.6 gi|150400016|ref|YP_001323783.1| - 3e-14 52.5 0.0 3.9e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|150400016|ref|YP_001323783.1| - 6.6e-06 25.5 0.0 9.2e-06 25.0 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain ProRS-C_2 PF09181.10 gi|150400016|ref|YP_001323783.1| - 0.023 14.8 0.1 0.049 13.8 0.1 1.7 1 1 0 1 1 1 0 Prolyl-tRNA synthetase, C-terminal DUF2067 PF09840.9 gi|150400017|ref|YP_001323784.1| - 4.1e-45 153.6 13.1 4.7e-45 153.4 13.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2067) MSA-2c PF12238.8 gi|150400017|ref|YP_001323784.1| - 1.7 8.6 6.6 0.96 9.4 4.0 1.7 1 1 1 2 2 2 0 Merozoite surface antigen 2c tRNA-synt_1b PF00579.25 gi|150400018|ref|YP_001323785.1| - 7.9e-48 163.3 0.1 1.1e-47 162.8 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.18 gi|150400018|ref|YP_001323785.1| - 0.00036 19.6 0.4 0.24 10.3 0.0 2.9 2 1 1 3 3 3 2 tRNA synthetases class I (K) MS_channel PF00924.18 gi|150400019|ref|YP_001323786.1| - 1.6e-59 200.9 2.2 1.6e-59 200.9 2.2 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel DUF1449 PF07290.11 gi|150400019|ref|YP_001323786.1| - 0.6 9.7 6.7 0.17 11.5 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1449) MarC PF01914.17 gi|150400020|ref|YP_001323787.1| - 5.6e-55 185.9 17.6 6.4e-55 185.7 17.6 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein RDD PF06271.12 gi|150400020|ref|YP_001323787.1| - 0.93 9.7 7.1 0.24 11.6 0.4 2.4 2 0 0 2 2 2 0 RDD family RseC_MucC PF04246.12 gi|150400020|ref|YP_001323787.1| - 2.8 7.9 6.8 11 6.0 0.7 2.5 2 2 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC PseudoU_synth_1 PF01416.20 gi|150400022|ref|YP_001323789.1| - 1.8e-18 67.0 0.0 2.2e-17 63.4 0.0 2.0 2 0 0 2 2 2 1 tRNA pseudouridine synthase DUF111 PF01969.17 gi|150400023|ref|YP_001323790.1| - 1.7e-97 326.9 0.0 1.9e-97 326.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 FeS PF04060.13 gi|150400024|ref|YP_001323791.1| - 3.2e-13 49.1 1.7 6.4e-13 48.1 1.7 1.6 1 0 0 1 1 1 1 Putative Fe-S cluster cobW PF02492.19 gi|150400025|ref|YP_001323792.1| - 5.4e-16 58.7 0.1 8.1e-16 58.1 0.1 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.22 gi|150400025|ref|YP_001323792.1| - 6.4e-05 22.7 0.2 0.00057 19.6 0.2 2.4 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|150400025|ref|YP_001323792.1| - 0.00018 20.6 0.5 0.0011 18.0 0.2 2.1 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_19 PF13245.6 gi|150400025|ref|YP_001323792.1| - 0.0011 19.3 0.2 0.0039 17.5 0.2 1.8 2 0 0 2 2 2 1 AAA domain DUF2075 PF09848.9 gi|150400025|ref|YP_001323792.1| - 0.0025 17.1 0.1 0.0036 16.6 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) Zeta_toxin PF06414.12 gi|150400025|ref|YP_001323792.1| - 0.003 16.9 0.0 0.0043 16.4 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin TK PF00265.18 gi|150400025|ref|YP_001323792.1| - 0.0031 17.4 0.0 0.0057 16.5 0.0 1.4 1 0 0 1 1 1 1 Thymidine kinase ResIII PF04851.15 gi|150400025|ref|YP_001323792.1| - 0.0056 16.7 0.2 0.0094 16.0 0.2 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit MobB PF03205.14 gi|150400025|ref|YP_001323792.1| - 0.0072 16.2 0.1 0.014 15.3 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B DnaB_C PF03796.15 gi|150400025|ref|YP_001323792.1| - 0.016 14.5 0.1 0.029 13.7 0.1 1.4 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain DUF917 PF06032.12 gi|150400025|ref|YP_001323792.1| - 0.016 14.0 0.0 0.026 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF917) CbiA PF01656.23 gi|150400025|ref|YP_001323792.1| - 0.023 14.8 0.3 0.045 13.8 0.3 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Zot PF05707.12 gi|150400025|ref|YP_001323792.1| - 0.031 13.9 0.0 0.063 12.9 0.0 1.5 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) UvrD-helicase PF00580.21 gi|150400025|ref|YP_001323792.1| - 0.056 12.9 0.5 0.087 12.3 0.5 1.3 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain PRK PF00485.18 gi|150400025|ref|YP_001323792.1| - 0.057 13.2 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 gi|150400025|ref|YP_001323792.1| - 0.071 13.7 0.8 0.2 12.2 0.8 1.9 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|150400025|ref|YP_001323792.1| - 0.11 11.4 0.1 0.17 10.8 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_24 PF13479.6 gi|150400025|ref|YP_001323792.1| - 0.12 12.1 0.1 0.18 11.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|150400025|ref|YP_001323792.1| - 0.12 12.1 0.3 0.18 11.5 0.3 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|150400025|ref|YP_001323792.1| - 0.14 12.5 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.10 gi|150400025|ref|YP_001323792.1| - 0.17 11.3 0.1 0.26 10.7 0.1 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_11 PF13086.6 gi|150400025|ref|YP_001323792.1| - 0.17 11.7 0.1 0.27 11.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain MipZ PF09140.11 gi|150400025|ref|YP_001323792.1| - 0.17 11.1 0.1 0.45 9.7 0.1 1.6 2 0 0 2 2 2 0 ATPase MipZ AAA_16 PF13191.6 gi|150400025|ref|YP_001323792.1| - 0.19 12.1 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain LpxK PF02606.14 gi|150400025|ref|YP_001323792.1| - 0.2 10.7 0.7 0.39 9.8 0.7 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase ABC_tran PF00005.27 gi|150400026|ref|YP_001323793.1| - 4.4e-14 53.2 0.4 8.5e-14 52.2 0.2 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|150400026|ref|YP_001323793.1| - 9.4e-10 38.8 0.8 5.8e-07 29.6 0.8 2.6 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|150400026|ref|YP_001323793.1| - 2.4e-06 27.1 0.4 5.1e-06 26.1 0.2 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|150400026|ref|YP_001323793.1| - 0.01 16.1 0.2 0.091 13.0 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|150400026|ref|YP_001323793.1| - 0.016 15.0 0.0 0.05 13.3 0.0 1.8 2 1 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|150400026|ref|YP_001323793.1| - 0.061 13.4 0.3 1.5 8.9 0.0 2.8 2 2 1 3 3 3 0 AAA domain AAA_29 PF13555.6 gi|150400026|ref|YP_001323793.1| - 0.07 12.9 0.1 0.16 11.8 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATPase_2 PF01637.18 gi|150400026|ref|YP_001323793.1| - 0.087 12.7 2.0 0.32 10.9 0.7 2.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea ComA PF02679.15 gi|150400027|ref|YP_001323794.1| - 2.6e-84 282.5 0.4 3e-84 282.3 0.4 1.0 1 0 0 1 1 1 1 (2R)-phospho-3-sulfolactate synthase (ComA) Isochorismatase PF00857.20 gi|150400027|ref|YP_001323794.1| - 0.0049 17.1 0.0 0.0092 16.2 0.0 1.4 1 0 0 1 1 1 1 Isochorismatase family AIRS_C PF02769.22 gi|150400028|ref|YP_001323795.1| - 2.3e-32 112.3 1.3 2.3e-32 112.3 1.3 1.5 2 0 0 2 2 2 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|150400028|ref|YP_001323795.1| - 1.7e-19 70.3 0.2 4.3e-19 69.0 0.2 1.7 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain NosD PF05048.13 gi|150400029|ref|YP_001323796.1| - 4.9e-54 183.1 80.6 9.5e-46 156.0 44.2 4.1 2 2 1 3 3 3 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|150400029|ref|YP_001323796.1| - 2.4e-24 86.0 71.5 3.2e-14 53.1 31.5 5.2 3 2 1 4 4 4 2 Right handed beta helix region Big_7 PF17957.1 gi|150400029|ref|YP_001323796.1| - 8.7e-24 84.1 13.5 1.8e-08 35.0 0.2 4.9 4 1 1 5 5 5 3 Bacterial Ig domain CE2_N PF17996.1 gi|150400029|ref|YP_001323796.1| - 4e-05 23.6 3.2 0.01 15.8 0.2 4.4 5 0 0 5 5 5 1 Carbohydrate esterase 2 N-terminal Big_3_4 PF13754.6 gi|150400029|ref|YP_001323796.1| - 0.0012 18.6 3.4 0.039 13.7 0.6 3.5 2 1 1 3 3 3 1 Domain of unknown function Collagen_mid PF15984.5 gi|150400029|ref|YP_001323796.1| - 0.004 16.9 0.3 0.008 15.9 0.3 1.4 1 0 0 1 1 1 1 Bacterial collagen, middle region DUF1664 PF07889.12 gi|150400029|ref|YP_001323796.1| - 0.013 15.6 0.0 0.043 13.9 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) MtrB PF05440.12 gi|150400029|ref|YP_001323796.1| - 0.037 14.4 2.2 6.9 7.2 0.4 2.7 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase subunit B DUF948 PF06103.11 gi|150400029|ref|YP_001323796.1| - 0.06 13.6 2.8 0.42 10.9 2.8 2.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Presenilin PF01080.17 gi|150400029|ref|YP_001323796.1| - 5.6 5.6 5.6 7.9 5.1 5.6 1.3 1 0 0 1 1 1 0 Presenilin TraB PF01963.17 gi|150400030|ref|YP_001323797.1| - 1e-29 104.3 0.1 1.9e-29 103.4 0.1 1.4 1 0 0 1 1 1 1 TraB family 60KD_IMP PF02096.20 gi|150400030|ref|YP_001323797.1| - 0.051 13.5 0.3 0.1 12.5 0.3 1.5 1 0 0 1 1 1 0 60Kd inner membrane protein CBS PF00571.28 gi|150400031|ref|YP_001323798.1| - 2.5e-32 111.1 3.1 3e-17 62.8 0.2 2.2 2 0 0 2 2 2 2 CBS domain Peptidase_S55 PF05580.12 gi|150400031|ref|YP_001323798.1| - 0.15 12.0 1.8 6.4 6.7 0.1 2.3 2 1 0 2 2 2 0 SpoIVB peptidase S55 GHMP_kinases_C PF08544.13 gi|150400032|ref|YP_001323799.1| - 6.6e-06 26.4 0.0 4.9e-05 23.6 0.0 2.3 2 0 0 2 2 2 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 gi|150400032|ref|YP_001323799.1| - 6.1e-05 23.2 0.8 0.0001 22.4 0.8 1.4 1 0 0 1 1 1 1 GHMP kinases N terminal domain PRA-CH PF01502.18 gi|150400033|ref|YP_001323800.1| - 1.6e-30 104.7 1.0 2.2e-30 104.3 1.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase CdAMP_rec PF06153.11 gi|150400033|ref|YP_001323800.1| - 0.042 14.0 0.0 0.06 13.6 0.0 1.3 1 0 0 1 1 1 0 Cyclic-di-AMP receptor GAD PF02938.14 gi|150400033|ref|YP_001323800.1| - 0.099 12.9 0.2 2.7 8.3 0.0 2.2 2 0 0 2 2 2 0 GAD domain T2SSE PF00437.20 gi|150400034|ref|YP_001323801.1| - 2.4e-10 40.0 0.0 4.9e-10 38.9 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.29 gi|150400034|ref|YP_001323801.1| - 5.1e-06 26.2 1.3 5.1e-06 26.2 1.3 2.6 3 0 0 3 3 1 1 KH domain PIN PF01850.21 gi|150400034|ref|YP_001323801.1| - 5e-05 23.8 0.2 0.00013 22.5 0.2 1.8 1 0 0 1 1 1 1 PIN domain AAA_18 PF13238.6 gi|150400034|ref|YP_001323801.1| - 9.9e-05 22.9 0.0 0.00049 20.7 0.0 2.3 2 0 0 2 2 1 1 AAA domain Thymidylate_kin PF02223.17 gi|150400034|ref|YP_001323801.1| - 0.0002 21.1 0.0 0.00088 19.0 0.0 2.1 1 1 0 1 1 1 1 Thymidylate kinase MeaB PF03308.16 gi|150400034|ref|YP_001323801.1| - 0.00023 20.2 0.0 0.00053 19.0 0.0 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_30 PF13604.6 gi|150400034|ref|YP_001323801.1| - 0.00081 19.2 0.0 0.25 11.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|150400034|ref|YP_001323801.1| - 0.0012 19.3 0.0 0.0031 17.9 0.0 1.7 2 0 0 2 2 1 1 AAA ATPase domain NTPase_1 PF03266.15 gi|150400034|ref|YP_001323801.1| - 0.0026 17.7 0.1 0.014 15.4 0.0 2.3 2 0 0 2 2 1 1 NTPase PIN_4 PF13638.6 gi|150400034|ref|YP_001323801.1| - 0.0035 17.6 0.0 0.011 16.0 0.0 1.9 1 0 0 1 1 1 1 PIN domain Viral_helicase1 PF01443.18 gi|150400034|ref|YP_001323801.1| - 0.0072 16.1 0.0 0.24 11.1 0.0 2.3 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_29 PF13555.6 gi|150400034|ref|YP_001323801.1| - 0.0095 15.7 0.0 0.032 14.0 0.0 1.8 2 0 0 2 2 1 1 P-loop containing region of AAA domain ATP_bind_1 PF03029.17 gi|150400034|ref|YP_001323801.1| - 0.0097 15.7 0.0 0.019 14.8 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein ABC_tran PF00005.27 gi|150400034|ref|YP_001323801.1| - 0.0098 16.4 0.0 0.032 14.8 0.0 1.9 2 0 0 2 2 1 1 ABC transporter KH_2 PF07650.17 gi|150400034|ref|YP_001323801.1| - 0.0099 15.7 4.1 0.0099 15.7 4.1 2.8 2 0 0 2 2 2 1 KH domain AAA_28 PF13521.6 gi|150400034|ref|YP_001323801.1| - 0.014 15.6 0.0 0.028 14.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|150400034|ref|YP_001323801.1| - 0.023 14.0 0.0 0.046 13.0 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin RsgA_GTPase PF03193.16 gi|150400034|ref|YP_001323801.1| - 0.03 14.2 0.0 0.061 13.2 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 gi|150400034|ref|YP_001323801.1| - 0.031 14.4 0.0 0.061 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.10 gi|150400034|ref|YP_001323801.1| - 0.049 13.1 0.0 0.14 11.6 0.0 1.7 1 0 0 1 1 1 0 Chromatin associated protein KTI12 RNA_helicase PF00910.22 gi|150400034|ref|YP_001323801.1| - 0.054 13.9 0.0 0.13 12.7 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Ploopntkinase3 PF18751.1 gi|150400034|ref|YP_001323801.1| - 0.054 13.4 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_5 PF07728.14 gi|150400034|ref|YP_001323801.1| - 0.063 13.3 0.0 0.15 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NACHT PF05729.12 gi|150400034|ref|YP_001323801.1| - 0.073 13.0 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 NACHT domain KH_4 PF13083.6 gi|150400034|ref|YP_001323801.1| - 0.073 13.0 0.5 0.41 10.5 0.5 2.4 1 0 0 1 1 1 0 KH domain MMR_HSR1 PF01926.23 gi|150400034|ref|YP_001323801.1| - 0.099 12.7 0.1 0.29 11.2 0.1 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|150400034|ref|YP_001323801.1| - 0.11 12.8 0.0 0.47 10.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|150400034|ref|YP_001323801.1| - 0.11 11.8 0.0 0.27 10.6 0.0 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 gi|150400034|ref|YP_001323801.1| - 0.16 11.7 0.0 0.49 10.1 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein PIN_12 PF16289.5 gi|150400034|ref|YP_001323801.1| - 0.2 12.1 5.6 0.11 13.0 1.1 2.7 2 1 0 2 2 2 0 PIN domain AIRC PF00731.20 gi|150400035|ref|YP_001323802.1| - 4.6e-57 191.7 1.4 5.2e-57 191.6 1.4 1.0 1 0 0 1 1 1 1 AIR carboxylase Fe-ADH_2 PF13685.6 gi|150400035|ref|YP_001323802.1| - 0.03 14.0 0.5 0.04 13.6 0.1 1.4 2 0 0 2 2 2 0 Iron-containing alcohol dehydrogenase LSDAT_euk PF18139.1 gi|150400035|ref|YP_001323802.1| - 0.12 11.8 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 SLOG in TRPM Fer4_7 PF12838.7 gi|150400036|ref|YP_001323803.1| - 5.3e-06 26.9 2.8 0.055 14.1 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150400036|ref|YP_001323803.1| - 6.4e-06 26.3 4.0 1.3e-05 25.3 4.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150400036|ref|YP_001323803.1| - 7.1e-06 26.1 12.1 1.4e-05 25.1 12.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Flavodoxin_5 PF12724.7 gi|150400036|ref|YP_001323803.1| - 2.7e-05 24.4 0.0 4.2e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Fer4_8 PF13183.6 gi|150400036|ref|YP_001323803.1| - 2.8e-05 24.5 1.7 0.018 15.5 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150400036|ref|YP_001323803.1| - 0.00022 21.3 9.4 0.00053 20.0 9.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|150400036|ref|YP_001323803.1| - 0.00031 20.4 11.1 0.004 16.9 2.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|150400036|ref|YP_001323803.1| - 0.00067 20.5 11.8 0.11 13.5 0.4 3.2 3 1 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|150400036|ref|YP_001323803.1| - 0.0011 19.5 4.6 0.057 14.0 0.1 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150400036|ref|YP_001323803.1| - 0.0013 18.8 6.7 0.061 13.5 0.5 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150400036|ref|YP_001323803.1| - 0.0037 17.6 13.5 0.069 13.7 2.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Flavodoxin_2 PF02525.17 gi|150400036|ref|YP_001323803.1| - 0.017 14.8 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 Flavodoxin-like fold Fer4_6 PF12837.7 gi|150400036|ref|YP_001323803.1| - 0.025 14.7 15.3 0.086 12.9 2.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Flavodoxin_NdrI PF07972.11 gi|150400036|ref|YP_001323803.1| - 0.12 12.6 0.4 0.47 10.6 0.1 2.0 1 1 1 2 2 2 0 NrdI Flavodoxin like Fer4_2 PF12797.7 gi|150400036|ref|YP_001323803.1| - 1.5 9.1 13.7 0.11 12.7 2.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain NDK PF00334.19 gi|150400037|ref|YP_001323804.1| - 6.7e-52 175.1 0.0 7.5e-52 174.9 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase ACT_5 PF13710.6 gi|150400037|ref|YP_001323804.1| - 0.027 14.3 0.2 0.45 10.4 0.1 2.2 2 0 0 2 2 2 0 ACT domain GTP_EFTU PF00009.27 gi|150400038|ref|YP_001323805.1| - 1.6e-31 109.4 0.1 1.4e-30 106.3 0.0 2.4 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain GTP_EFTU_D4 PF14578.6 gi|150400038|ref|YP_001323805.1| - 2.9e-25 88.0 0.6 2.9e-25 88.0 0.6 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 4 IF-2 PF11987.8 gi|150400038|ref|YP_001323805.1| - 4.7e-22 78.1 2.0 1.6e-21 76.4 2.0 2.0 1 0 0 1 1 1 1 Translation-initiation factor 2 MMR_HSR1 PF01926.23 gi|150400038|ref|YP_001323805.1| - 4.8e-09 36.3 1.0 2e-07 31.1 0.1 2.9 3 0 0 3 3 3 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 gi|150400038|ref|YP_001323805.1| - 1.1e-07 32.2 0.9 1.6e-05 25.2 0.0 2.8 2 0 0 2 2 2 1 Elongation factor Tu domain 2 ATP_bind_1 PF03029.17 gi|150400038|ref|YP_001323805.1| - 0.0008 19.3 0.0 0.0023 17.8 0.0 1.7 1 1 0 1 1 1 1 Conserved hypothetical ATP binding protein Roc PF08477.13 gi|150400038|ref|YP_001323805.1| - 0.0016 18.6 0.0 0.005 17.1 0.0 1.8 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 gi|150400038|ref|YP_001323805.1| - 0.0043 17.1 0.8 0.78 9.8 0.0 3.2 2 1 1 3 3 3 1 Dynamin family Ras PF00071.22 gi|150400038|ref|YP_001323805.1| - 0.0083 15.7 0.0 0.039 13.5 0.0 2.1 2 1 0 2 2 2 1 Ras family MnmE_helical PF12631.7 gi|150400038|ref|YP_001323805.1| - 0.027 14.7 0.0 0.52 10.4 0.0 2.3 1 1 0 1 1 1 0 MnmE helical domain MapZ_EC1 PF18041.1 gi|150400038|ref|YP_001323805.1| - 0.096 12.9 0.0 0.79 10.0 0.1 2.3 2 0 0 2 2 2 0 MapZ extracellular domain 1 V-ATPase_G PF03179.15 gi|150400038|ref|YP_001323805.1| - 1.1 9.8 4.9 1.1 9.8 1.7 2.3 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit TrkA_N PF02254.18 gi|150400039|ref|YP_001323806.1| - 1.6e-20 73.5 0.5 4.5e-20 72.1 0.5 1.8 1 0 0 1 1 1 1 TrkA-N domain DHH PF01368.20 gi|150400039|ref|YP_001323806.1| - 8.4e-14 51.6 0.1 2.3e-13 50.2 0.1 1.8 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.19 gi|150400039|ref|YP_001323806.1| - 3e-11 43.9 0.3 3e-11 43.9 0.3 2.6 3 0 0 3 3 3 1 DHHA1 domain NAD_binding_7 PF13241.6 gi|150400039|ref|YP_001323806.1| - 0.00011 22.5 0.2 0.0003 21.2 0.2 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|150400039|ref|YP_001323806.1| - 0.0018 18.5 0.8 0.013 15.8 0.2 2.3 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain XdhC_C PF13478.6 gi|150400039|ref|YP_001323806.1| - 0.05 14.1 0.0 1.2 9.7 0.0 2.6 2 0 0 2 2 2 0 XdhC Rossmann domain MJ1316 PF04457.12 gi|150400040|ref|YP_001323807.1| - 2.5e-13 50.5 0.1 2.8e-13 50.4 0.1 1.0 1 0 0 1 1 1 1 MJ1316 RNA cyclic group end recognition domain CBS PF00571.28 gi|150400041|ref|YP_001323808.1| - 8.2e-22 77.4 6.2 2.5e-10 40.7 0.4 2.8 3 0 0 3 3 3 2 CBS domain ParBc PF02195.18 gi|150400041|ref|YP_001323808.1| - 3.6e-12 46.4 0.3 2.4e-11 43.7 0.1 2.1 2 0 0 2 2 2 1 ParB-like nuclease domain ParBc_2 PF08857.11 gi|150400041|ref|YP_001323808.1| - 0.012 15.7 0.1 0.075 13.1 0.0 2.2 2 1 0 2 2 2 0 Putative ParB-like nuclease HypD PF01924.16 gi|150400042|ref|YP_001323809.1| - 9.6e-145 482.1 0.6 1.1e-144 481.9 0.6 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family NAC PF01849.18 gi|150400043|ref|YP_001323810.1| - 1.4e-13 50.6 3.8 2.7e-13 49.7 3.8 1.5 1 0 0 1 1 1 1 NAC domain HOIP-UBA PF16678.5 gi|150400043|ref|YP_001323810.1| - 0.03 14.3 0.4 0.03 14.3 0.4 1.5 2 0 0 2 2 2 0 HOIP UBA domain pair GvpK PF05121.12 gi|150400043|ref|YP_001323810.1| - 0.036 14.1 0.6 8.8 6.4 0.0 2.2 2 0 0 2 2 2 0 Gas vesicle protein K DUF3867 PF12983.7 gi|150400043|ref|YP_001323810.1| - 0.073 13.1 4.8 0.085 12.9 4.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3867) Flg_hook PF02120.16 gi|150400043|ref|YP_001323810.1| - 0.12 12.3 0.3 3.4 7.6 0.1 2.2 2 0 0 2 2 2 0 Flagellar hook-length control protein FliK SCO1-SenC PF02630.14 gi|150400043|ref|YP_001323810.1| - 0.14 12.1 3.2 0.21 11.5 3.0 1.4 1 1 0 1 1 1 0 SCO1/SenC AIRS_C PF02769.22 gi|150400044|ref|YP_001323811.1| - 6.6e-11 42.6 0.1 1.2e-10 41.7 0.1 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|150400044|ref|YP_001323811.1| - 9.2e-07 29.4 3.3 2e-06 28.4 3.3 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain NYD-SP28 PF14772.6 gi|150400044|ref|YP_001323811.1| - 0.15 12.1 1.0 0.43 10.7 1.0 1.8 1 0 0 1 1 1 0 Sperm tail Pox_VLTF3 PF04947.14 gi|150400045|ref|YP_001323812.1| - 0.028 14.1 1.2 0.028 14.1 1.2 1.1 1 0 0 1 1 1 0 Poxvirus Late Transcription Factor VLTF3 like DeoC PF01791.9 gi|150400046|ref|YP_001323813.1| - 7.1e-46 156.7 0.0 8.5e-46 156.5 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PQQ_3 PF13570.6 gi|150400047|ref|YP_001323814.1| - 7.6e-69 226.7 1.4 2.2e-10 40.7 0.0 8.1 8 0 0 8 8 8 8 PQQ-like domain PQQ PF01011.21 gi|150400047|ref|YP_001323814.1| - 2.4e-47 156.7 25.8 2.1e-08 33.7 0.8 8.9 9 0 0 9 9 9 7 PQQ enzyme repeat PQQ_2 PF13360.6 gi|150400047|ref|YP_001323814.1| - 1.3e-34 119.8 0.2 5e-16 59.0 0.1 3.4 1 1 2 3 3 3 3 PQQ-like domain Reg_prop PF07494.11 gi|150400047|ref|YP_001323814.1| - 3.4e-07 29.7 4.6 14 6.3 0.0 7.2 7 0 0 7 7 6 0 Two component regulator propeller Peptidase_M60_C PF18630.1 gi|150400047|ref|YP_001323814.1| - 3.7e-05 23.8 0.0 16 5.7 0.0 6.4 7 0 0 7 7 7 0 Peptidase M60 C-terminal domain HepII_C PF18675.1 gi|150400047|ref|YP_001323814.1| - 5.9e-05 23.1 5.0 3.5 7.8 0.0 6.1 4 2 3 7 7 7 1 Heparinase II C-terminal domain Tcp10_C PF07202.13 gi|150400047|ref|YP_001323814.1| - 0.00037 20.5 0.3 0.33 10.9 0.1 3.7 1 1 2 3 3 3 1 T-complex protein 10 C-terminus NifZ PF04319.13 gi|150400047|ref|YP_001323814.1| - 0.0014 18.4 0.3 2.4 8.0 0.0 4.8 5 1 1 6 6 6 1 NifZ domain DUF1972 PF09314.11 gi|150400047|ref|YP_001323814.1| - 0.0021 17.7 2.8 3.2 7.3 0.0 4.4 4 1 1 5 5 5 1 Domain of unknown function (DUF1972) Ago_N_1 PF18351.1 gi|150400047|ref|YP_001323814.1| - 0.01 16.2 1.3 3.1e+02 1.9 0.0 5.6 6 0 0 6 6 6 0 Fungal Argonaute N-terminal domain DUF4836 PF16120.5 gi|150400047|ref|YP_001323814.1| - 0.03 13.3 3.1 5.7 5.8 0.1 3.8 3 1 1 4 4 4 0 Domain of unknown function (DUF4836) DUF5478 PF17572.2 gi|150400047|ref|YP_001323814.1| - 0.032 14.3 2.3 38 4.5 0.0 4.9 5 1 1 6 6 6 0 Family of unknown function (DUF5478) Amidase_2 PF01510.25 gi|150400047|ref|YP_001323814.1| - 0.12 12.8 1.4 37 4.8 1.4 4.1 1 1 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase BNR_4 PF15892.5 gi|150400047|ref|YP_001323814.1| - 0.21 10.9 3.2 28 4.0 0.1 3.5 2 1 1 3 3 3 0 BNR repeat-containing family member GHMP_kinases_N PF00288.26 gi|150400048|ref|YP_001323815.1| - 1.1e-13 51.2 1.8 2.2e-13 50.2 1.8 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|150400048|ref|YP_001323815.1| - 2.2e-09 37.6 0.0 5.3e-09 36.3 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal NMD3 PF04981.13 gi|150400049|ref|YP_001323816.1| - 1.5e-53 181.7 4.5 2.1e-53 181.3 4.5 1.2 1 0 0 1 1 1 1 NMD3 family ESCRT-II PF05871.12 gi|150400049|ref|YP_001323816.1| - 0.0099 16.1 0.1 0.58 10.4 0.0 2.4 2 0 0 2 2 2 1 ESCRT-II complex subunit zf-Sec23_Sec24 PF04810.15 gi|150400049|ref|YP_001323816.1| - 0.039 14.0 0.5 0.039 14.0 0.5 2.8 3 0 0 3 3 3 0 Sec23/Sec24 zinc finger DZR PF12773.7 gi|150400049|ref|YP_001323816.1| - 0.19 11.8 6.2 0.37 10.9 2.0 2.3 2 0 0 2 2 2 0 Double zinc ribbon eIF-5_eIF-2B PF01873.17 gi|150400050|ref|YP_001323817.1| - 1.3e-36 125.0 0.0 1.5e-36 124.8 0.0 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Zn-ribbon_8 PF09723.10 gi|150400050|ref|YP_001323817.1| - 0.023 14.8 0.2 0.95 9.6 0.0 2.4 2 0 0 2 2 2 0 Zinc ribbon domain Stc1 PF12898.7 gi|150400050|ref|YP_001323817.1| - 0.035 14.7 0.1 0.069 13.7 0.1 1.5 1 0 0 1 1 1 0 Stc1 domain Lar_restr_allev PF14354.6 gi|150400050|ref|YP_001323817.1| - 0.043 14.2 0.6 0.071 13.5 0.6 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.6 gi|150400050|ref|YP_001323817.1| - 0.049 13.4 2.0 1.5 8.6 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|150400050|ref|YP_001323817.1| - 0.083 12.3 1.6 1.3 8.5 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|150400050|ref|YP_001323817.1| - 0.19 11.7 1.5 0.61 10.1 1.5 1.9 1 1 0 1 1 1 0 Nudix N-terminal zf-TFIIB PF13453.6 gi|150400050|ref|YP_001323817.1| - 0.23 10.8 3.0 0.26 10.7 1.3 1.9 2 0 0 2 2 2 0 Transcription factor zinc-finger DUF35_N PF12172.8 gi|150400050|ref|YP_001323817.1| - 0.24 11.3 3.2 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TFIIS_C PF01096.18 gi|150400050|ref|YP_001323817.1| - 0.27 11.1 2.1 4.9 7.1 2.1 2.2 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) zf-ACC PF17848.1 gi|150400050|ref|YP_001323817.1| - 0.31 11.2 2.6 2.9 8.1 0.1 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf_C2H2_13 PF18508.1 gi|150400050|ref|YP_001323817.1| - 0.94 9.1 4.1 1.4 8.5 0.9 2.3 1 1 1 2 2 2 0 Zinc finger domain DUF1610 PF07754.11 gi|150400050|ref|YP_001323817.1| - 1.2 9.2 6.6 2.2 8.3 0.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Ribosomal_L15e PF00827.17 gi|150400051|ref|YP_001323818.1| - 2.6e-84 281.7 6.8 3e-84 281.5 6.8 1.0 1 0 0 1 1 1 1 Ribosomal L15 N6_Mtase PF02384.16 gi|150400052|ref|YP_001323819.1| - 7e-16 58.4 0.7 7e-16 58.4 0.7 3.3 3 1 0 3 3 3 2 N-6 DNA Methylase UPF0020 PF01170.18 gi|150400052|ref|YP_001323819.1| - 4e-07 29.9 0.0 3.3e-05 23.6 0.0 2.3 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Eco57I PF07669.11 gi|150400052|ref|YP_001323819.1| - 1.5e-05 25.5 1.8 4.6e-05 23.9 0.1 2.8 2 0 0 2 2 2 1 Eco57I restriction-modification methylase Vps4_C PF09336.10 gi|150400052|ref|YP_001323819.1| - 0.024 14.6 0.1 0.071 13.1 0.1 1.8 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain TaqI_C PF12950.7 gi|150400052|ref|YP_001323819.1| - 0.026 14.6 0.1 0.026 14.6 0.1 3.0 3 0 0 3 3 3 0 TaqI-like C-terminal specificity domain Methyltransf_31 PF13847.6 gi|150400052|ref|YP_001323819.1| - 0.028 14.2 0.1 0.22 11.3 0.0 2.6 2 1 0 2 2 2 0 Methyltransferase domain DUF641 PF04859.12 gi|150400052|ref|YP_001323819.1| - 1.9 8.8 4.8 0.93 9.8 1.7 2.1 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) RNA_binding PF01877.17 gi|150400053|ref|YP_001323820.1| - 1.5e-32 112.3 2.0 1.5e-32 112.3 2.0 1.4 2 0 0 2 2 2 1 RNA binding HypA PF01155.19 gi|150400054|ref|YP_001323821.1| - 3.6e-27 94.6 0.5 4.1e-27 94.4 0.5 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Mu-like_Com PF10122.9 gi|150400054|ref|YP_001323821.1| - 0.0011 18.4 1.9 0.003 17.0 1.1 2.0 1 1 1 2 2 2 1 Mu-like prophage protein Com Zn-ribbon_8 PF09723.10 gi|150400054|ref|YP_001323821.1| - 0.0025 17.9 1.0 0.0046 17.0 0.3 1.8 2 0 0 2 2 2 1 Zinc ribbon domain zf-ISL3 PF14690.6 gi|150400054|ref|YP_001323821.1| - 0.012 16.2 0.9 0.065 13.9 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-ribbon_3 PF13248.6 gi|150400054|ref|YP_001323821.1| - 0.042 13.3 2.9 0.19 11.2 0.1 2.5 3 0 0 3 3 3 0 zinc-ribbon domain TackOD1 PF18551.1 gi|150400054|ref|YP_001323821.1| - 0.045 13.4 0.1 0.058 13.1 0.1 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 Lar_restr_allev PF14354.6 gi|150400054|ref|YP_001323821.1| - 0.066 13.6 0.4 6.4 7.2 0.1 2.2 1 1 1 2 2 2 0 Restriction alleviation protein Lar zf-UDP PF14569.6 gi|150400054|ref|YP_001323821.1| - 0.1 12.8 0.3 0.18 12.0 0.3 1.4 1 0 0 1 1 1 0 Zinc-binding RING-finger Ribosomal_L32p PF01783.23 gi|150400054|ref|YP_001323821.1| - 0.13 12.5 0.2 6.7 7.1 0.0 2.2 2 0 0 2 2 2 0 Ribosomal L32p protein family zf-ACC PF17848.1 gi|150400054|ref|YP_001323821.1| - 0.58 10.3 0.3 0.58 10.3 0.3 2.5 2 1 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Rubredoxin PF00301.20 gi|150400055|ref|YP_001323822.1| - 2.6e-12 46.5 9.0 8.8e-11 41.7 9.0 2.0 1 1 0 1 1 1 1 Rubredoxin zf-RanBP PF00641.18 gi|150400055|ref|YP_001323822.1| - 6e-05 22.3 3.4 0.066 12.6 0.4 2.1 2 0 0 2 2 2 2 Zn-finger in Ran binding protein and others zf-Sec23_Sec24 PF04810.15 gi|150400055|ref|YP_001323822.1| - 0.00031 20.7 1.0 0.2 11.7 0.0 2.1 2 0 0 2 2 2 2 Sec23/Sec24 zinc finger Desulfoferrod_N PF06397.12 gi|150400055|ref|YP_001323822.1| - 0.0031 17.1 0.7 0.49 10.1 0.4 2.1 2 0 0 2 2 2 1 Desulfoferrodoxin, N-terminal domain zf-MIZ PF02891.20 gi|150400055|ref|YP_001323822.1| - 0.0037 17.0 2.0 0.19 11.5 0.1 2.1 2 0 0 2 2 2 1 MIZ/SP-RING zinc finger Vps36-NZF-N PF16988.5 gi|150400055|ref|YP_001323822.1| - 0.0038 16.6 3.7 0.067 12.6 3.7 2.0 1 1 0 1 1 1 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain DUF4379 PF14311.6 gi|150400055|ref|YP_001323822.1| - 0.0043 17.4 3.9 0.5 10.8 4.7 2.1 1 1 1 2 2 2 2 Probable Zinc-ribbon domain HypA PF01155.19 gi|150400055|ref|YP_001323822.1| - 0.0046 17.0 0.4 0.0046 17.0 0.4 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_ribbon_SprT PF17283.2 gi|150400055|ref|YP_001323822.1| - 0.0079 16.1 2.4 2.5 8.1 0.1 2.1 2 0 0 2 2 2 2 SprT-like zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|150400055|ref|YP_001323822.1| - 0.0086 16.0 1.0 0.021 14.8 1.0 1.6 1 1 0 1 1 1 1 Putative transposase DNA-binding domain zf-H2C2_2 PF13465.6 gi|150400055|ref|YP_001323822.1| - 0.01 16.2 1.3 1.2 9.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger double domain HalOD2 PF18547.1 gi|150400055|ref|YP_001323822.1| - 0.011 15.7 4.4 1.1 9.2 1.2 2.1 1 1 1 2 2 2 0 Halobacterial output domain 2 Elf1 PF05129.13 gi|150400055|ref|YP_001323822.1| - 0.012 15.6 1.5 0.29 11.2 0.1 2.0 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like Zn-ribbon_8 PF09723.10 gi|150400055|ref|YP_001323822.1| - 0.013 15.6 1.4 0.02 15.0 1.4 1.3 1 1 0 1 1 1 0 Zinc ribbon domain RbpA PF13397.6 gi|150400055|ref|YP_001323822.1| - 0.023 15.3 1.2 0.49 11.0 0.1 2.0 1 1 1 2 2 2 0 RNA polymerase-binding protein VATC PF18716.1 gi|150400055|ref|YP_001323822.1| - 0.028 14.3 1.3 0.34 10.8 0.2 2.1 2 0 0 2 2 2 0 Vms1-associating treble clef domain UPF0547 PF10571.9 gi|150400055|ref|YP_001323822.1| - 0.035 14.2 1.8 2.9 8.1 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-C2H2_4 PF13894.6 gi|150400055|ref|YP_001323822.1| - 0.039 14.8 2.3 4.5 8.4 0.3 2.3 2 1 0 2 2 2 0 C2H2-type zinc finger zinc_ribbon_2 PF13240.6 gi|150400055|ref|YP_001323822.1| - 0.059 13.1 5.0 2.6 7.9 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DUF2175 PF09943.9 gi|150400055|ref|YP_001323822.1| - 0.18 12.1 3.3 1.5 9.2 0.4 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) PHD_4 PF16866.5 gi|150400055|ref|YP_001323822.1| - 0.22 11.6 5.9 1.5 8.9 5.9 1.9 1 1 0 1 1 1 0 PHD-finger DUF2072 PF09845.9 gi|150400055|ref|YP_001323822.1| - 0.23 11.7 2.1 0.41 10.9 2.1 1.4 1 1 0 1 1 1 0 Zn-ribbon containing protein TFIIS_C PF01096.18 gi|150400055|ref|YP_001323822.1| - 0.34 10.8 3.8 2 8.4 0.2 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) ADK_lid PF05191.14 gi|150400055|ref|YP_001323822.1| - 0.43 10.6 2.6 0.63 10.1 2.6 1.4 1 1 0 1 1 1 0 Adenylate kinase, active site lid zf-ribbon_3 PF13248.6 gi|150400055|ref|YP_001323822.1| - 0.48 9.9 5.1 2.1 7.8 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|150400055|ref|YP_001323822.1| - 0.48 10.2 6.5 5.7 6.8 1.0 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Zn-C2H2_12 PF18112.1 gi|150400055|ref|YP_001323822.1| - 0.56 10.7 3.3 6.7 7.3 0.5 2.3 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain zf-C2H2_3 PF13878.6 gi|150400055|ref|YP_001323822.1| - 0.63 9.9 3.3 3.2 7.7 0.6 2.1 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-C2H2 PF00096.26 gi|150400055|ref|YP_001323822.1| - 0.88 10.2 3.6 8.3 7.1 0.1 2.4 3 0 0 3 3 2 0 Zinc finger, C2H2 type AGOG PF09171.10 gi|150400056|ref|YP_001323823.1| - 7.2e-81 271.2 1.1 1e-80 270.7 1.1 1.2 1 0 0 1 1 1 1 N-glycosylase/DNA lyase Thioredox_DsbH PF03190.15 gi|150400057|ref|YP_001323824.1| - 3.4e-73 245.0 0.0 1.1e-72 243.4 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|150400057|ref|YP_001323824.1| - 2.1e-10 40.6 0.0 4.5e-10 39.6 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin-like Sigma70_r3 PF04539.16 gi|150400057|ref|YP_001323824.1| - 0.0097 16.0 0.4 0.025 14.7 0.4 1.6 1 0 0 1 1 1 1 Sigma-70 region 3 Glyco_hydro_127 PF07944.12 gi|150400057|ref|YP_001323824.1| - 0.015 13.8 0.6 1.4 7.4 0.2 2.9 2 1 0 2 2 2 0 Beta-L-arabinofuranosidase, GH127 aGPT-Pplase3 PF18746.1 gi|150400057|ref|YP_001323824.1| - 0.038 13.3 0.1 0.086 12.2 0.0 1.7 2 0 0 2 2 2 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 DUF982 PF06169.12 gi|150400057|ref|YP_001323824.1| - 0.041 13.9 0.0 0.41 10.7 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF982) Thioredoxin_2 PF13098.6 gi|150400057|ref|YP_001323824.1| - 0.067 13.6 0.0 0.27 11.7 0.0 2.1 1 0 0 1 1 1 0 Thioredoxin-like domain Sigma70_r4_2 PF08281.12 gi|150400057|ref|YP_001323824.1| - 0.078 12.7 0.0 0.17 11.6 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 LANC_like PF05147.13 gi|150400057|ref|YP_001323824.1| - 0.09 11.3 7.4 0.3 9.6 2.1 3.7 3 1 0 3 3 3 0 Lanthionine synthetase C-like protein Glyco_hydro_88 PF07470.13 gi|150400057|ref|YP_001323824.1| - 0.11 11.6 4.4 0.12 11.4 0.4 2.6 2 1 1 3 3 3 0 Glycosyl Hydrolase Family 88 Glyco_hydro_76 PF03663.14 gi|150400057|ref|YP_001323824.1| - 0.14 11.7 2.5 20 4.6 0.1 3.3 1 1 3 4 4 4 0 Glycosyl hydrolase family 76 Sigma70_r4 PF04545.16 gi|150400057|ref|YP_001323824.1| - 0.14 11.7 0.1 0.41 10.2 0.1 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 TPP_enzyme_C PF02775.21 gi|150400058|ref|YP_001323825.1| - 5.1e-31 107.5 0.3 8.6e-31 106.8 0.1 1.4 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|150400058|ref|YP_001323825.1| - 1e-21 76.8 1.5 1.8e-21 76.0 1.5 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal POR_N PF01855.19 gi|150400059|ref|YP_001323826.1| - 9.3e-52 176.1 0.0 1.4e-51 175.5 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|150400059|ref|YP_001323826.1| - 2e-27 96.4 0.2 4.5e-27 95.2 0.2 1.6 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_N PF02776.18 gi|150400059|ref|YP_001323826.1| - 0.005 16.5 0.0 0.0078 15.8 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SWIM PF04434.17 gi|150400060|ref|YP_001323827.1| - 2.7e-05 23.7 0.3 5.1e-05 22.8 0.3 1.5 1 0 0 1 1 1 1 SWIM zinc finger TusA PF01206.17 gi|150400061|ref|YP_001323828.1| - 7.8e-21 73.7 0.0 8.4e-21 73.6 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|150400061|ref|YP_001323828.1| - 0.028 14.3 0.0 0.034 14.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) DrsE PF02635.15 gi|150400062|ref|YP_001323829.1| - 3.2e-25 88.8 0.0 3.5e-25 88.6 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|150400062|ref|YP_001323829.1| - 0.023 14.6 0.1 0.23 11.3 0.0 1.9 1 1 1 2 2 2 0 DsrE/DsrF/DrsH-like family TYW3 PF02676.14 gi|150400063|ref|YP_001323830.1| - 1.9e-37 128.7 0.0 2.4e-37 128.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase TYW3 Intimin_C PF07979.11 gi|150400063|ref|YP_001323830.1| - 0.04 14.3 0.2 0.23 11.9 0.2 2.1 2 1 0 2 2 2 0 Intimin C-type lectin domain DUF2111 PF09884.9 gi|150400064|ref|YP_001323831.1| - 2e-29 101.5 2.2 2.5e-29 101.2 2.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) DUF2112 PF09885.9 gi|150400065|ref|YP_001323832.1| - 8.7e-64 213.9 0.0 1e-63 213.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) HGD-D PF06050.13 gi|150400065|ref|YP_001323832.1| - 0.00087 19.1 0.0 0.0009 19.1 0.0 1.1 1 0 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component SCP2 PF02036.17 gi|150400066|ref|YP_001323833.1| - 0.027 15.0 0.0 0.036 14.6 0.0 1.3 1 0 0 1 1 1 0 SCP-2 sterol transfer family AMP-binding_C_2 PF14535.6 gi|150400067|ref|YP_001323834.1| - 1.1e-25 89.8 0.6 1e-24 86.7 0.0 2.3 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|150400067|ref|YP_001323834.1| - 2.8e-11 42.7 0.0 2.8e-11 42.7 0.0 1.4 2 0 0 2 2 2 1 AMP-binding enzyme GH3 PF03321.13 gi|150400067|ref|YP_001323834.1| - 0.00014 20.9 0.0 0.00098 18.1 0.0 2.1 2 0 0 2 2 2 1 GH3 auxin-responsive promoter DUF1335 PF07056.11 gi|150400067|ref|YP_001323834.1| - 0.14 12.3 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1335) POR PF01558.18 gi|150400068|ref|YP_001323835.1| - 1.1e-36 126.5 0.1 1.3e-36 126.3 0.1 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Ntox4 PF15541.6 gi|150400068|ref|YP_001323835.1| - 0.15 12.4 0.2 2.6 8.5 0.1 2.6 2 1 1 3 3 3 0 Bacterial toxin 4 Ribonuclease PF00545.20 gi|150400068|ref|YP_001323835.1| - 0.17 12.6 0.0 0.33 11.7 0.0 1.4 1 0 0 1 1 1 0 ribonuclease TPP_enzyme_C PF02775.21 gi|150400069|ref|YP_001323836.1| - 2e-26 92.6 0.0 3.9e-26 91.7 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|150400069|ref|YP_001323836.1| - 3.8e-14 53.0 0.0 6.4e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|150400069|ref|YP_001323836.1| - 3.4e-09 36.1 17.4 9.4e-07 28.4 4.7 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150400069|ref|YP_001323836.1| - 1.2e-05 25.2 21.3 8.8e-05 22.4 3.9 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150400069|ref|YP_001323836.1| - 1.7e-05 24.9 11.4 3.8e-05 23.8 10.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150400069|ref|YP_001323836.1| - 6.3e-05 23.0 16.8 0.00098 19.2 14.9 2.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150400069|ref|YP_001323836.1| - 0.00029 20.8 19.5 0.0038 17.2 2.2 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150400069|ref|YP_001323836.1| - 0.00068 19.7 13.7 0.00068 19.7 13.7 2.4 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150400069|ref|YP_001323836.1| - 0.0011 19.5 13.5 0.003 18.1 1.3 2.9 3 0 0 3 3 2 2 4Fe-4S dicluster domain TPP_enzyme_N PF02776.18 gi|150400069|ref|YP_001323836.1| - 0.0064 16.1 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_4 PF12800.7 gi|150400069|ref|YP_001323836.1| - 0.0069 16.8 2.5 0.0069 16.8 2.5 3.3 3 0 0 3 3 3 1 4Fe-4S binding domain Transket_pyr PF02779.24 gi|150400069|ref|YP_001323836.1| - 0.013 15.2 0.0 0.034 13.8 0.0 1.7 2 0 0 2 2 2 0 Transketolase, pyrimidine binding domain PFOR_II PF17147.4 gi|150400069|ref|YP_001323836.1| - 0.035 14.4 0.0 0.091 13.1 0.0 1.7 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II Fer4_16 PF13484.6 gi|150400069|ref|YP_001323836.1| - 0.082 13.9 13.6 0.08 13.9 4.4 2.8 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|150400069|ref|YP_001323836.1| - 0.13 12.8 11.9 0.41 11.2 2.8 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|150400069|ref|YP_001323836.1| - 0.3 11.6 12.8 0.49 10.9 3.4 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|150400069|ref|YP_001323836.1| - 0.97 9.7 12.0 0.048 13.8 2.6 2.5 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150400069|ref|YP_001323836.1| - 0.98 10.5 14.8 0.067 14.2 6.0 3.0 2 0 0 2 2 2 0 4Fe-4S binding domain zf-C2H2_11 PF16622.5 gi|150400069|ref|YP_001323836.1| - 2.3 8.1 5.8 16 5.4 0.8 2.7 2 0 0 2 2 2 0 zinc-finger C2H2-type FBPase_3 PF01950.16 gi|150400070|ref|YP_001323837.1| - 1.2e-180 600.4 0.0 1.4e-180 600.2 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase ILVD_EDD PF00920.21 gi|150400071|ref|YP_001323838.1| - 1.6e-214 713.4 1.1 1.8e-214 713.2 1.1 1.0 1 0 0 1 1 1 1 Dehydratase family TP_methylase PF00590.20 gi|150400072|ref|YP_001323839.1| - 1.6e-43 149.1 0.0 1.8e-43 148.9 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases ABC_sub_bind PF04392.12 gi|150400072|ref|YP_001323839.1| - 0.11 11.7 2.4 5.5 6.1 0.0 2.7 2 1 1 3 3 3 0 ABC transporter substrate binding protein GHMP_kinases_N PF00288.26 gi|150400073|ref|YP_001323840.1| - 7e-12 45.4 0.7 3.1e-11 43.3 1.2 1.8 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|150400073|ref|YP_001323840.1| - 0.0023 18.3 0.0 0.0069 16.7 0.0 1.8 1 0 0 1 1 1 1 GHMP kinases C terminal DUF447 PF04289.12 gi|150400074|ref|YP_001323841.1| - 4.7e-32 111.2 0.0 5.7e-32 110.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) AAA PF00004.29 gi|150400075|ref|YP_001323842.1| - 3.9e-15 56.4 0.0 8.8e-15 55.3 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|150400075|ref|YP_001323842.1| - 1e-09 38.6 0.3 4.5e-09 36.5 0.0 2.1 2 1 0 2 2 1 1 Rad17 P-loop domain RuvB_N PF05496.12 gi|150400075|ref|YP_001323842.1| - 2.2e-09 37.3 0.0 4.3e-09 36.3 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 gi|150400075|ref|YP_001323842.1| - 5.7e-07 29.0 0.0 9.9e-07 28.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) DNA_pol3_delta PF06144.13 gi|150400075|ref|YP_001323842.1| - 1.8e-06 27.8 0.1 6.8e-05 22.7 0.0 2.4 2 0 0 2 2 2 1 DNA polymerase III, delta subunit AAA_14 PF13173.6 gi|150400075|ref|YP_001323842.1| - 3.3e-06 27.2 0.3 1.2e-05 25.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|150400075|ref|YP_001323842.1| - 5.4e-06 26.7 0.1 0.0016 18.7 0.0 3.4 2 2 1 3 3 3 1 AAA domain AAA_17 PF13207.6 gi|150400075|ref|YP_001323842.1| - 0.00011 22.6 0.0 0.00086 19.7 0.0 2.6 3 1 1 4 4 1 1 AAA domain ATPase_2 PF01637.18 gi|150400075|ref|YP_001323842.1| - 0.00021 21.3 1.8 0.0015 18.5 0.0 2.5 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_5 PF07728.14 gi|150400075|ref|YP_001323842.1| - 0.00042 20.3 0.0 0.0022 18.0 0.0 2.3 2 0 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_assoc_2 PF16193.5 gi|150400075|ref|YP_001323842.1| - 0.00062 20.0 0.1 0.0031 17.8 0.1 2.2 1 0 0 1 1 1 1 AAA C-terminal domain IstB_IS21 PF01695.17 gi|150400075|ref|YP_001323842.1| - 0.00071 19.4 0.0 0.0015 18.3 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein TIP49 PF06068.13 gi|150400075|ref|YP_001323842.1| - 0.00072 18.9 0.0 0.0027 16.9 0.0 1.9 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_18 PF13238.6 gi|150400075|ref|YP_001323842.1| - 0.00078 20.0 0.0 0.0028 18.2 0.0 2.1 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|150400075|ref|YP_001323842.1| - 0.0014 18.4 0.0 0.0027 17.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 gi|150400075|ref|YP_001323842.1| - 0.0014 18.2 0.0 0.0039 16.7 0.0 1.7 1 1 0 1 1 1 1 P-loop containing dynein motor region NB-ARC PF00931.22 gi|150400075|ref|YP_001323842.1| - 0.0024 17.1 0.0 0.09 11.9 0.0 2.5 1 1 1 2 2 2 1 NB-ARC domain RNA_helicase PF00910.22 gi|150400075|ref|YP_001323842.1| - 0.0029 18.0 0.0 0.012 16.0 0.0 2.1 1 0 0 1 1 1 1 RNA helicase AAA_16 PF13191.6 gi|150400075|ref|YP_001323842.1| - 0.0031 17.9 0.0 0.013 15.8 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 gi|150400075|ref|YP_001323842.1| - 0.0038 17.2 0.0 0.16 11.9 0.0 2.7 3 0 0 3 3 2 1 NACHT domain AAA_24 PF13479.6 gi|150400075|ref|YP_001323842.1| - 0.004 16.9 0.8 0.0093 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|150400075|ref|YP_001323842.1| - 0.004 17.3 0.0 0.009 16.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain Bac_DnaA PF00308.18 gi|150400075|ref|YP_001323842.1| - 0.0041 17.0 0.4 0.018 14.8 0.0 2.2 2 1 0 2 2 2 1 Bacterial dnaA protein Mg_chelatase PF01078.21 gi|150400075|ref|YP_001323842.1| - 0.0044 16.4 0.0 0.0071 15.7 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI ABC_tran PF00005.27 gi|150400075|ref|YP_001323842.1| - 0.006 17.1 0.6 0.061 13.8 0.0 2.8 2 1 0 2 2 2 1 ABC transporter Zeta_toxin PF06414.12 gi|150400075|ref|YP_001323842.1| - 0.0078 15.5 0.0 0.017 14.4 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_19 PF13245.6 gi|150400075|ref|YP_001323842.1| - 0.0081 16.5 0.6 0.096 13.0 0.0 2.5 2 1 1 3 3 2 1 AAA domain AAA_25 PF13481.6 gi|150400075|ref|YP_001323842.1| - 0.014 15.0 0.2 0.11 12.1 0.0 2.1 1 1 1 2 2 2 0 AAA domain DEAD PF00270.29 gi|150400075|ref|YP_001323842.1| - 0.015 15.1 0.2 1.6 8.5 0.0 2.8 2 1 1 3 3 2 0 DEAD/DEAH box helicase AAA_2 PF07724.14 gi|150400075|ref|YP_001323842.1| - 0.015 15.4 0.3 0.042 14.0 0.0 1.9 2 0 0 2 2 1 0 AAA domain (Cdc48 subfamily) Sigma54_activ_2 PF14532.6 gi|150400075|ref|YP_001323842.1| - 0.018 15.2 0.0 0.037 14.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 gi|150400075|ref|YP_001323842.1| - 0.024 13.7 0.0 0.086 11.9 0.0 1.9 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 ADK PF00406.22 gi|150400075|ref|YP_001323842.1| - 0.027 14.6 0.2 0.099 12.7 0.0 2.1 2 0 0 2 2 2 0 Adenylate kinase T2SSE PF00437.20 gi|150400075|ref|YP_001323842.1| - 0.037 13.1 0.0 0.1 11.7 0.0 1.7 2 0 0 2 2 1 0 Type II/IV secretion system protein AAA_28 PF13521.6 gi|150400075|ref|YP_001323842.1| - 0.047 13.9 0.0 0.099 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 gi|150400075|ref|YP_001323842.1| - 0.049 13.3 0.0 0.092 12.4 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain NTPase_1 PF03266.15 gi|150400075|ref|YP_001323842.1| - 0.059 13.3 0.0 0.55 10.1 0.0 2.3 1 1 1 2 2 2 0 NTPase AAA_29 PF13555.6 gi|150400075|ref|YP_001323842.1| - 0.061 13.1 0.0 0.32 10.8 0.0 2.2 2 0 0 2 2 1 0 P-loop containing region of AAA domain TsaE PF02367.17 gi|150400075|ref|YP_001323842.1| - 0.079 13.0 0.0 0.28 11.2 0.0 1.9 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Glyco_hydro_97 PF10566.9 gi|150400075|ref|YP_001323842.1| - 0.098 11.9 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 Glycoside hydrolase 97 Hydin_ADK PF17213.3 gi|150400075|ref|YP_001323842.1| - 0.53 10.5 3.1 0.87 9.8 0.0 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Met_10 PF02475.16 gi|150400076|ref|YP_001323843.1| - 9.4e-64 214.8 0.2 1.5e-63 214.1 0.2 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|150400076|ref|YP_001323843.1| - 4e-17 61.8 3.8 8.7e-17 60.8 0.9 3.0 3 0 0 3 3 3 1 tRNA methyltransferase 5 N-terminal domain Methyltransf_15 PF09445.10 gi|150400076|ref|YP_001323843.1| - 7.4e-07 28.9 0.1 1.4e-06 28.0 0.1 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 gi|150400076|ref|YP_001323843.1| - 1.4e-06 27.9 0.1 2.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|150400076|ref|YP_001323843.1| - 0.00037 20.1 0.1 0.00072 19.2 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase small domain N6_N4_Mtase PF01555.18 gi|150400076|ref|YP_001323843.1| - 0.00047 19.9 0.3 0.087 12.5 0.0 2.4 2 0 0 2 2 2 2 DNA methylase Methyltransf_18 PF12847.7 gi|150400076|ref|YP_001323843.1| - 0.0024 17.8 0.2 0.013 15.4 0.0 2.3 2 1 0 3 3 3 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|150400076|ref|YP_001323843.1| - 0.0028 18.3 0.0 0.011 16.4 0.0 2.1 3 0 0 3 3 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|150400076|ref|YP_001323843.1| - 0.0077 15.9 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 TRM PF02005.16 gi|150400076|ref|YP_001323843.1| - 0.014 14.6 0.2 0.014 14.6 0.2 1.6 2 0 0 2 2 2 0 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_31 PF13847.6 gi|150400076|ref|YP_001323843.1| - 0.021 14.6 0.0 0.11 12.3 0.0 2.1 1 1 1 2 2 2 0 Methyltransferase domain Sigma70_r4_2 PF08281.12 gi|150400077|ref|YP_001323844.1| - 0.00022 20.8 0.1 0.008 15.8 0.0 2.3 2 0 0 2 2 2 1 Sigma-70, region 4 DUF1699 PF08004.11 gi|150400077|ref|YP_001323844.1| - 0.0018 18.0 1.2 0.0023 17.6 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) SpoU_sub_bind PF08032.12 gi|150400077|ref|YP_001323844.1| - 0.15 12.3 1.3 0.51 10.6 0.2 2.2 2 1 1 3 3 3 0 RNA 2'-O ribose methyltransferase substrate binding Gp_dh_C PF02800.20 gi|150400078|ref|YP_001323845.1| - 7e-32 110.2 0.9 1.1e-31 109.6 0.9 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|150400078|ref|YP_001323845.1| - 1.4e-08 34.9 2.9 1.5e-08 34.8 0.6 2.1 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|150400078|ref|YP_001323845.1| - 4.3e-06 27.0 2.4 0.00012 22.4 0.2 3.1 2 2 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|150400078|ref|YP_001323845.1| - 0.00055 20.2 0.2 0.0013 19.0 0.2 1.7 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|150400078|ref|YP_001323845.1| - 0.0082 15.5 0.2 0.038 13.3 0.2 2.1 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|150400078|ref|YP_001323845.1| - 0.018 15.7 0.2 0.055 14.1 0.0 1.9 2 0 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|150400078|ref|YP_001323845.1| - 0.025 15.0 0.1 0.053 14.0 0.1 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|150400078|ref|YP_001323845.1| - 0.038 14.3 0.4 0.12 12.6 0.0 2.1 3 0 0 3 3 3 0 TrkA-N domain tRNA-synt_1g PF09334.11 gi|150400079|ref|YP_001323846.1| - 9.9e-159 528.3 1.9 1.3e-158 527.8 1.9 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|150400079|ref|YP_001323846.1| - 3.7e-28 97.5 1.0 6.8e-28 96.6 1.0 1.5 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 gi|150400079|ref|YP_001323846.1| - 4e-22 78.2 7.3 1.1e-09 37.2 0.6 4.1 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 gi|150400079|ref|YP_001323846.1| - 5.7e-16 58.7 0.1 1.8e-08 34.1 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 gi|150400079|ref|YP_001323846.1| - 3.5e-11 43.3 2.3 3.5e-11 43.3 2.3 1.8 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 gi|150400079|ref|YP_001323846.1| - 0.0037 16.2 0.4 0.0096 14.9 0.2 1.7 2 0 0 2 2 2 1 tRNA synthetases class I (K) zf-C3HC4_3 PF13920.6 gi|150400079|ref|YP_001323846.1| - 0.18 11.7 7.4 0.11 12.3 0.5 2.4 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Laminin_EGF PF00053.24 gi|150400079|ref|YP_001323846.1| - 0.26 11.5 4.9 0.55 10.4 4.9 1.5 1 0 0 1 1 1 0 Laminin EGF domain TackOD1 PF18551.1 gi|150400079|ref|YP_001323846.1| - 0.5 10.0 6.9 0.23 11.1 3.7 2.0 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 zf-C2HCIx2C PF10782.9 gi|150400079|ref|YP_001323846.1| - 0.59 10.1 4.5 17 5.4 0.1 2.6 2 0 0 2 2 2 0 Zinc-finger DZR PF12773.7 gi|150400079|ref|YP_001323846.1| - 1.9 8.6 9.1 72 3.5 9.1 2.3 1 1 0 1 1 1 0 Double zinc ribbon zinc-ribbons_6 PF07191.12 gi|150400079|ref|YP_001323846.1| - 4 7.5 8.9 26 4.9 8.9 2.2 1 1 0 1 1 1 0 zinc-ribbons HypA PF01155.19 gi|150400079|ref|YP_001323846.1| - 6.5 6.8 9.9 3.2e+02 1.4 7.8 3.0 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Glycos_trans_3N PF02885.17 gi|150400080|ref|YP_001323847.1| - 2.8e-16 59.1 0.4 7.7e-16 57.7 0.1 1.9 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain PYNP_C PF07831.13 gi|150400080|ref|YP_001323847.1| - 2e-15 56.2 0.9 3.1e-13 49.2 0.1 2.6 2 0 0 2 2 2 2 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_transf_3 PF00591.21 gi|150400080|ref|YP_001323847.1| - 3.8e-15 56.2 0.2 5e-14 52.5 0.2 2.3 1 1 0 1 1 1 1 Glycosyl transferase family, a/b domain Lip_prot_lig_C PF10437.9 gi|150400080|ref|YP_001323847.1| - 0.045 13.7 0.1 2.8 8.0 0.1 2.7 2 0 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus Mucin_bdg PF03272.13 gi|150400080|ref|YP_001323847.1| - 0.06 13.4 0.1 0.15 12.1 0.1 1.6 1 0 0 1 1 1 0 Putative mucin or carbohydrate-binding module tRNA-synt_1b PF00579.25 gi|150400080|ref|YP_001323847.1| - 0.086 12.2 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) DUF63 PF01889.17 gi|150400081|ref|YP_001323848.1| - 1.1e-78 265.2 27.6 1.2e-78 265.1 27.6 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 DUF3624 PF12292.8 gi|150400081|ref|YP_001323848.1| - 0.028 14.8 0.2 0.063 13.7 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3624) DUF2097 PF09870.9 gi|150400082|ref|YP_001323849.1| - 1.5e-20 73.2 4.9 1.7e-20 73.0 4.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2097) CbiC PF02570.15 gi|150400083|ref|YP_001323850.1| - 1.1e-60 204.7 0.0 1.2e-60 204.5 0.0 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase ADH_zinc_N PF00107.26 gi|150400083|ref|YP_001323850.1| - 0.049 13.6 0.0 0.11 12.5 0.0 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DUF2760 PF10816.8 gi|150400083|ref|YP_001323850.1| - 0.084 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2760) HIT PF01230.23 gi|150400084|ref|YP_001323851.1| - 6.9e-29 100.5 0.1 8.2e-29 100.2 0.1 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|150400084|ref|YP_001323851.1| - 1.2e-15 58.0 0.2 1.7e-15 57.5 0.2 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|150400084|ref|YP_001323851.1| - 0.016 15.0 0.2 0.021 14.7 0.2 1.2 1 0 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 Filo_VP24 PF06389.11 gi|150400084|ref|YP_001323851.1| - 0.023 14.2 0.0 0.027 14.0 0.0 1.1 1 0 0 1 1 1 0 Filovirus membrane-associated protein VP24 SH2_2 PF14633.6 gi|150400084|ref|YP_001323851.1| - 0.039 13.4 0.1 0.044 13.2 0.1 1.2 1 0 0 1 1 1 0 SH2 domain DUF92 PF01940.16 gi|150400085|ref|YP_001323852.1| - 1.5e-53 181.6 14.6 2.9e-53 180.7 14.6 1.4 1 1 0 1 1 1 1 Integral membrane protein DUF92 MotB_plug PF13677.6 gi|150400085|ref|YP_001323852.1| - 4.9 6.8 7.9 3.3 7.4 0.5 3.4 3 1 0 3 3 3 0 Membrane MotB of proton-channel complex MotA/MotB E1-E2_ATPase PF00122.20 gi|150400086|ref|YP_001323853.1| - 4.6e-48 163.1 10.2 2.8e-47 160.6 0.6 3.5 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|150400086|ref|YP_001323853.1| - 3.6e-30 105.0 8.3 3.6e-30 105.0 8.3 2.1 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|150400086|ref|YP_001323853.1| - 4.4e-26 92.5 0.2 8.1e-26 91.6 0.2 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|150400086|ref|YP_001323853.1| - 5.5e-18 64.4 0.1 2.1e-16 59.3 0.0 2.7 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|150400086|ref|YP_001323853.1| - 1.7e-08 34.6 0.6 4.9e-07 29.7 0.4 2.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|150400086|ref|YP_001323853.1| - 6.2e-05 23.0 0.0 0.00013 22.0 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) HAD PF12710.7 gi|150400086|ref|YP_001323853.1| - 0.00067 20.1 0.0 0.0013 19.1 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase SpoU_methylase PF00588.19 gi|150400087|ref|YP_001323854.1| - 9.9e-32 110.0 0.1 1.4e-31 109.5 0.1 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family BKACE PF05853.12 gi|150400087|ref|YP_001323854.1| - 0.038 13.3 0.0 0.053 12.8 0.0 1.3 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme PTH2 PF01981.16 gi|150400088|ref|YP_001323855.1| - 0.1 12.9 0.0 0.19 12.0 0.0 1.6 1 1 0 1 1 1 0 Peptidyl-tRNA hydrolase PTH2 Hjc PF01870.18 gi|150400089|ref|YP_001323856.1| - 9.8e-27 92.8 0.0 1.3e-26 92.4 0.0 1.1 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) Mrr_cat PF04471.12 gi|150400089|ref|YP_001323856.1| - 5.7e-05 23.1 0.0 7.4e-05 22.8 0.0 1.3 1 1 0 1 1 1 1 Restriction endonuclease HicA_toxin PF07927.12 gi|150400089|ref|YP_001323856.1| - 0.0017 18.4 0.2 0.0032 17.5 0.2 1.5 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, MTES_1575 PF18741.1 gi|150400089|ref|YP_001323856.1| - 0.012 15.8 0.0 0.016 15.4 0.0 1.2 1 0 0 1 1 1 0 REase_MTES_1575 DUF5128 PF17170.4 gi|150400089|ref|YP_001323856.1| - 0.037 13.2 0.0 0.048 12.8 0.0 1.1 1 0 0 1 1 1 0 6-bladed beta-propeller UPF0102 PF02021.17 gi|150400089|ref|YP_001323856.1| - 0.073 13.3 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0102 DUF2102 PF09875.9 gi|150400090|ref|YP_001323857.1| - 1.8e-39 133.6 0.1 2.5e-39 133.1 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) DBI_PRT PF02277.17 gi|150400091|ref|YP_001323858.1| - 2.1e-07 30.5 0.0 2.9e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyltransferase Chromate_transp PF02417.15 gi|150400091|ref|YP_001323858.1| - 0.13 12.4 0.3 0.78 9.9 0.3 1.9 1 1 0 1 1 1 0 Chromate transporter PYC_OADA PF02436.18 gi|150400092|ref|YP_001323859.1| - 6e-59 199.1 0.2 1.3e-58 198.0 0.1 1.6 2 0 0 2 2 2 1 Conserved carboxylase domain HMGL-like PF00682.19 gi|150400092|ref|YP_001323859.1| - 1.2e-44 152.9 0.0 1.6e-44 152.5 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.22 gi|150400092|ref|YP_001323859.1| - 7.5e-19 67.3 3.8 1.4e-18 66.5 3.8 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|150400092|ref|YP_001323859.1| - 1.3e-10 40.9 4.0 1e-05 25.3 0.1 2.8 2 1 1 3 3 3 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|150400092|ref|YP_001323859.1| - 0.00066 20.3 1.3 1.4 9.7 0.0 2.9 3 0 0 3 3 3 2 HlyD family secretion protein HlyD_D23 PF16576.5 gi|150400092|ref|YP_001323859.1| - 0.0011 18.2 0.8 0.21 10.8 0.1 2.3 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion PASTA PF03793.19 gi|150400092|ref|YP_001323859.1| - 0.21 11.5 2.4 2.7 7.9 0.2 2.7 1 1 1 2 2 2 0 PASTA domain CPSase_L_D2 PF02786.17 gi|150400093|ref|YP_001323860.1| - 2.8e-83 278.6 1.1 4.3e-83 278.0 1.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|150400093|ref|YP_001323860.1| - 4.1e-47 159.3 0.1 2.2e-46 157.0 0.0 2.1 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|150400093|ref|YP_001323860.1| - 9.4e-41 138.3 0.0 1.9e-40 137.3 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 gi|150400093|ref|YP_001323860.1| - 5.5e-14 52.2 0.3 1.3e-13 51.0 0.3 1.6 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 gi|150400093|ref|YP_001323860.1| - 5.8e-08 33.0 0.2 1.2e-07 31.9 0.2 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 gi|150400093|ref|YP_001323860.1| - 1.7e-07 31.0 0.2 3.5e-07 30.0 0.2 1.4 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 gi|150400093|ref|YP_001323860.1| - 7.4e-07 28.9 0.6 2.5e-06 27.2 0.6 1.7 1 1 0 1 1 1 1 RimK-like ATP-grasp domain GARS_A PF01071.19 gi|150400093|ref|YP_001323860.1| - 7.8e-05 22.5 0.2 0.0002 21.2 0.2 1.7 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_Ter PF15632.6 gi|150400093|ref|YP_001323860.1| - 0.0032 17.2 0.0 0.0067 16.2 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_5 PF13549.6 gi|150400093|ref|YP_001323860.1| - 0.012 15.1 0.1 0.025 14.0 0.1 1.6 1 1 0 1 1 1 0 ATP-grasp domain Oxidored_nitro PF00148.19 gi|150400093|ref|YP_001323860.1| - 0.022 13.5 0.0 0.034 12.9 0.0 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase TMP-TENI PF02581.17 gi|150400093|ref|YP_001323860.1| - 0.034 13.5 0.0 0.72 9.2 0.0 2.7 3 0 0 3 3 3 0 Thiamine monophosphate synthase Diphthami_syn_2 PF01902.17 gi|150400095|ref|YP_001323862.1| - 1.8e-85 285.9 1.4 2e-85 285.8 1.4 1.0 1 0 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 gi|150400095|ref|YP_001323862.1| - 0.047 13.2 0.0 0.088 12.3 0.0 1.6 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC GARS_N PF02844.15 gi|150400095|ref|YP_001323862.1| - 0.11 13.2 0.0 0.33 11.8 0.0 1.8 2 1 0 2 2 2 0 Phosphoribosylglycinamide synthetase, N domain DUF4352 PF11611.8 gi|150400096|ref|YP_001323863.1| - 0.0025 18.1 2.4 0.0042 17.4 0.2 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4352) PilJ_C PF18223.1 gi|150400096|ref|YP_001323863.1| - 0.015 15.8 0.7 0.05 14.1 0.3 2.0 2 0 0 2 2 2 0 Pili PilJ C-terminal domain LPAM_1 PF08139.12 gi|150400096|ref|YP_001323863.1| - 0.051 14.1 0.6 0.12 12.9 0.6 1.7 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site PBP_like_2 PF12849.7 gi|150400097|ref|YP_001323864.1| - 3.4e-35 122.1 0.2 2.2e-34 119.4 0.2 1.8 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|150400097|ref|YP_001323864.1| - 2.9e-13 49.4 0.0 3.4e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|150400097|ref|YP_001323864.1| - 1.3e-06 28.3 0.0 0.0038 17.0 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|150400097|ref|YP_001323864.1| - 0.049 13.0 0.0 0.087 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein HGD-D PF06050.13 gi|150400098|ref|YP_001323865.1| - 4.7e-90 302.6 0.4 5.3e-90 302.5 0.4 1.0 1 0 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component 5_3_exonuc PF01367.20 gi|150400098|ref|YP_001323865.1| - 0.079 13.6 0.4 0.29 11.8 0.4 2.0 1 0 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold Gpr1_Fun34_YaaH PF01184.19 gi|150400099|ref|YP_001323866.1| - 1.4e-45 155.5 17.0 1.6e-45 155.2 17.0 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Yip1 PF04893.17 gi|150400099|ref|YP_001323866.1| - 3.3 7.4 21.1 97 2.6 21.1 2.3 1 1 0 1 1 1 0 Yip1 domain BcrAD_BadFG PF01869.20 gi|150400100|ref|YP_001323867.1| - 4.4e-42 144.4 0.1 9.2e-42 143.4 0.1 1.5 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Acetate_kinase PF00871.17 gi|150400100|ref|YP_001323867.1| - 0.00022 20.0 0.1 0.021 13.5 0.0 2.1 2 0 0 2 2 2 2 Acetokinase family FGGY_C PF02782.16 gi|150400100|ref|YP_001323867.1| - 0.0007 19.4 0.0 0.0013 18.5 0.0 1.5 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain ROK PF00480.20 gi|150400100|ref|YP_001323867.1| - 0.0014 18.2 0.3 1.2 8.5 0.0 2.2 2 0 0 2 2 2 2 ROK family FtsA PF14450.6 gi|150400100|ref|YP_001323867.1| - 0.0037 17.7 2.0 0.073 13.5 0.1 2.6 2 1 0 2 2 2 1 Cell division protein FtsA MutL PF13941.6 gi|150400100|ref|YP_001323867.1| - 0.018 13.7 0.1 0.15 10.6 0.0 2.2 2 0 0 2 2 2 0 MutL protein S4_2 PF13275.6 gi|150400100|ref|YP_001323867.1| - 0.029 14.2 0.1 0.66 9.8 0.0 2.4 2 0 0 2 2 2 0 S4 domain EutA PF06277.11 gi|150400100|ref|YP_001323867.1| - 0.034 13.0 2.9 1.8 7.3 0.5 2.6 2 1 0 2 2 2 0 Ethanolamine utilisation protein EutA Peptidase_M22 PF00814.25 gi|150400100|ref|YP_001323867.1| - 0.079 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Glycoprotease family Hydant_A_N PF05378.13 gi|150400100|ref|YP_001323867.1| - 0.08 12.6 0.3 0.54 9.9 0.1 2.1 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase N-terminal region FGGY_N PF00370.21 gi|150400100|ref|YP_001323867.1| - 0.19 11.3 0.7 0.25 10.9 0.1 1.5 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, N-terminal domain UPF0126 PF03458.13 gi|150400101|ref|YP_001323868.1| - 2.9e-39 132.8 24.3 9.1e-21 73.5 3.8 2.4 3 0 0 3 3 3 2 UPF0126 domain MTD PF01993.18 gi|150400102|ref|YP_001323869.1| - 6.3e-135 448.8 7.2 7.2e-135 448.6 7.2 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase Spt5-NGN PF03439.13 gi|150400102|ref|YP_001323869.1| - 0.061 13.2 0.9 0.15 11.9 0.3 2.0 2 0 0 2 2 2 0 Early transcription elongation factor of RNA pol II, NGN section DUF3646 PF12362.8 gi|150400103|ref|YP_001323870.1| - 0.0083 16.4 0.0 0.012 15.9 0.0 1.4 1 1 0 1 1 1 1 DNA polymerase III gamma and tau subunits C terminal CopK PF11525.8 gi|150400103|ref|YP_001323870.1| - 0.062 12.9 0.2 0.069 12.8 0.2 1.1 1 0 0 1 1 1 0 Copper resistance protein K PIN_6 PF17146.4 gi|150400104|ref|YP_001323871.1| - 1.5e-11 44.6 0.0 2.9e-11 43.7 0.0 1.4 1 0 0 1 1 1 1 PIN domain of ribonuclease PIN_5 PF08745.11 gi|150400104|ref|YP_001323871.1| - 1.1e-07 31.5 0.0 1.5e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 PINc domain ribonuclease ADK_lid PF05191.14 gi|150400104|ref|YP_001323871.1| - 1.2 9.1 7.3 0.35 10.9 3.0 2.3 2 1 0 2 2 2 0 Adenylate kinase, active site lid Radical_SAM PF04055.21 gi|150400105|ref|YP_001323872.1| - 2e-19 70.6 0.0 3.4e-19 69.8 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|150400105|ref|YP_001323872.1| - 0.00086 19.4 0.0 0.0027 17.8 0.0 1.9 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|150400105|ref|YP_001323872.1| - 0.0079 16.5 0.0 0.019 15.2 0.0 1.8 1 0 0 1 1 1 1 4Fe-4S single cluster domain Lig_C PF18330.1 gi|150400106|ref|YP_001323873.1| - 5e-39 133.1 1.8 9.2e-39 132.3 0.8 2.0 2 0 0 2 2 2 1 Ligase Pab1020 C-terminal region RNA_ligase PF09414.10 gi|150400106|ref|YP_001323873.1| - 4.1e-18 66.2 0.3 9.3e-18 65.1 0.3 1.7 1 0 0 1 1 1 1 RNA ligase DNA_ligase_A_M PF01068.21 gi|150400106|ref|YP_001323873.1| - 4e-08 33.2 0.7 1.5e-07 31.3 0.7 1.9 1 1 0 1 1 1 1 ATP dependent DNA ligase domain SpoU_sub_bind PF08032.12 gi|150400106|ref|YP_001323873.1| - 0.072 13.4 0.2 2 8.8 0.0 3.3 2 1 1 3 3 3 0 RNA 2'-O ribose methyltransferase substrate binding PHP_C PF13263.6 gi|150400107|ref|YP_001323874.1| - 5.3e-12 45.3 0.0 1.1e-11 44.3 0.0 1.5 1 0 0 1 1 1 1 PHP-associated Amidohydro_1 PF01979.20 gi|150400108|ref|YP_001323875.1| - 2.4e-54 185.0 0.2 4.1e-54 184.2 0.2 1.4 1 1 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.22 gi|150400108|ref|YP_001323875.1| - 1.3e-05 24.7 0.0 2.1e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.11 gi|150400108|ref|YP_001323875.1| - 0.19 11.2 0.1 11 5.3 0.0 2.6 2 1 0 2 2 2 0 Amidohydrolase family DNA_pol_B PF00136.21 gi|150400109|ref|YP_001323876.1| - 4.2e-73 246.6 8.9 8.3e-73 245.6 8.9 1.4 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|150400109|ref|YP_001323876.1| - 2.2e-42 145.4 19.1 2.2e-42 145.4 19.1 2.9 2 1 0 2 2 2 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.6 gi|150400109|ref|YP_001323876.1| - 6.9e-09 35.9 2.4 1.5e-08 34.8 0.1 2.9 3 1 1 4 4 4 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|150400109|ref|YP_001323876.1| - 7.1e-05 22.6 0.0 0.00018 21.3 0.0 1.7 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB UPF0167 PF03691.14 gi|150400109|ref|YP_001323876.1| - 0.0062 16.4 0.3 0.0062 16.4 0.3 2.8 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0167) DUF3666 PF12408.8 gi|150400109|ref|YP_001323876.1| - 0.082 12.1 0.1 0.2 10.9 0.1 1.7 1 0 0 1 1 1 0 Ribose-5-phosphate isomerase Aconitase_C PF00694.19 gi|150400110|ref|YP_001323877.1| - 1.6e-23 83.4 0.0 1.3e-22 80.6 0.1 1.9 1 1 1 2 2 2 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|150400110|ref|YP_001323877.1| - 0.00083 19.0 0.2 0.01 15.5 0.2 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus ABC_tran PF00005.27 gi|150400111|ref|YP_001323878.1| - 6.5e-40 136.8 0.0 5e-19 69.2 0.0 2.6 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|150400111|ref|YP_001323878.1| - 9.3e-13 48.6 13.7 0.0059 16.4 1.7 4.2 2 2 2 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|150400111|ref|YP_001323878.1| - 4.9e-11 42.5 7.0 7.8e-06 25.5 0.2 3.8 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain RLI PF04068.15 gi|150400111|ref|YP_001323878.1| - 3.3e-08 33.2 1.1 6.7e-08 32.2 1.1 1.6 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Rad17 PF03215.15 gi|150400111|ref|YP_001323878.1| - 3.6e-07 30.3 0.0 0.0076 16.2 0.0 2.4 2 0 0 2 2 2 2 Rad17 P-loop domain Fer4 PF00037.27 gi|150400111|ref|YP_001323878.1| - 9.7e-07 28.4 2.0 9.7e-07 28.4 2.0 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_23 PF13476.6 gi|150400111|ref|YP_001323878.1| - 2.8e-06 28.0 5.3 0.0041 17.7 1.3 2.8 2 1 0 2 2 2 2 AAA domain AAA PF00004.29 gi|150400111|ref|YP_001323878.1| - 9.8e-06 26.0 0.1 0.085 13.3 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|150400111|ref|YP_001323878.1| - 1e-05 25.5 2.4 0.023 14.6 0.1 2.9 3 0 0 3 3 3 2 RsgA GTPase AAA_24 PF13479.6 gi|150400111|ref|YP_001323878.1| - 5.7e-05 22.9 0.1 0.028 14.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|150400111|ref|YP_001323878.1| - 9.1e-05 22.1 2.4 0.017 14.8 0.1 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain Fer4_6 PF12837.7 gi|150400111|ref|YP_001323878.1| - 0.00011 22.1 9.9 0.00031 20.7 1.5 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_18 PF13238.6 gi|150400111|ref|YP_001323878.1| - 0.00028 21.4 2.8 0.12 12.9 0.1 3.5 2 2 0 2 2 2 1 AAA domain Fer4_10 PF13237.6 gi|150400111|ref|YP_001323878.1| - 0.00059 19.9 9.6 0.0017 18.4 1.1 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_16 PF13191.6 gi|150400111|ref|YP_001323878.1| - 0.00063 20.2 0.1 0.67 10.3 0.1 2.5 2 1 0 2 2 2 1 AAA ATPase domain MMR_HSR1 PF01926.23 gi|150400111|ref|YP_001323878.1| - 0.00081 19.4 1.4 1.6 8.9 0.0 3.2 2 1 0 2 2 2 1 50S ribosome-binding GTPase RNA_helicase PF00910.22 gi|150400111|ref|YP_001323878.1| - 0.00089 19.6 0.1 1.3 9.5 0.0 2.5 2 0 0 2 2 2 1 RNA helicase AAA_5 PF07728.14 gi|150400111|ref|YP_001323878.1| - 0.0022 18.0 0.6 4.3 7.3 0.0 3.2 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|150400111|ref|YP_001323878.1| - 0.0032 17.2 0.2 3.2 7.5 0.0 3.4 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain Fer4_21 PF14697.6 gi|150400111|ref|YP_001323878.1| - 0.0038 17.3 7.3 0.0068 16.5 7.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150400111|ref|YP_001323878.1| - 0.0038 17.2 1.2 0.0038 17.2 1.2 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_9 PF13187.6 gi|150400111|ref|YP_001323878.1| - 0.004 17.3 8.3 0.0071 16.5 8.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_14 PF13173.6 gi|150400111|ref|YP_001323878.1| - 0.0042 17.1 0.6 5.2 7.1 0.1 3.2 3 0 0 3 3 3 0 AAA domain AAA_15 PF13175.6 gi|150400111|ref|YP_001323878.1| - 0.01 15.6 8.0 1.4 8.5 3.0 3.6 1 1 1 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 gi|150400111|ref|YP_001323878.1| - 0.011 15.4 1.1 6.4 6.4 0.0 3.0 3 1 0 3 3 3 0 AAA domain Fer4_7 PF12838.7 gi|150400111|ref|YP_001323878.1| - 0.013 16.1 7.4 0.028 15.0 7.4 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain AAA_33 PF13671.6 gi|150400111|ref|YP_001323878.1| - 0.017 15.3 0.6 4.7 7.4 0.0 3.2 4 0 0 4 4 4 0 AAA domain AAA_22 PF13401.6 gi|150400111|ref|YP_001323878.1| - 0.018 15.3 0.3 12 6.2 0.0 2.8 2 1 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 gi|150400111|ref|YP_001323878.1| - 0.026 14.3 0.1 1.9 8.2 0.0 2.6 3 0 0 3 3 2 0 Conserved hypothetical ATP binding protein Fer4_16 PF13484.6 gi|150400111|ref|YP_001323878.1| - 0.036 15.0 0.4 0.036 15.0 0.4 2.4 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain MeaB PF03308.16 gi|150400111|ref|YP_001323878.1| - 0.082 11.9 1.6 4.2 6.3 0.1 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_28 PF13521.6 gi|150400111|ref|YP_001323878.1| - 0.083 13.1 0.5 9.8 6.4 0.1 2.6 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|150400111|ref|YP_001323878.1| - 0.09 12.7 2.5 0.69 9.8 0.3 2.5 2 0 0 2 2 2 0 NACHT domain VirE PF05272.11 gi|150400111|ref|YP_001323878.1| - 0.093 12.5 0.0 3.1 7.5 0.0 2.5 2 0 0 2 2 2 0 Virulence-associated protein E SbcCD_C PF13558.6 gi|150400111|ref|YP_001323878.1| - 0.094 13.0 0.0 14 6.0 0.0 2.8 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit MukB PF04310.12 gi|150400111|ref|YP_001323878.1| - 0.11 12.2 0.3 0.69 9.7 0.0 2.1 2 0 0 2 2 2 0 MukB N-terminal AAA_7 PF12775.7 gi|150400111|ref|YP_001323878.1| - 0.14 11.6 0.2 8.7 5.8 0.0 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region TsaE PF02367.17 gi|150400111|ref|YP_001323878.1| - 0.15 12.1 1.0 4.9 7.2 0.1 2.7 3 0 0 3 3 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Roc PF08477.13 gi|150400111|ref|YP_001323878.1| - 0.17 12.1 0.3 29 4.9 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_25 PF13481.6 gi|150400111|ref|YP_001323878.1| - 0.33 10.5 5.0 4.6 6.8 0.0 3.2 4 0 0 4 4 3 0 AAA domain DUF87 PF01935.17 gi|150400111|ref|YP_001323878.1| - 0.43 10.6 4.6 29 4.6 0.2 3.3 3 0 0 3 3 3 0 Helicase HerA, central domain NTPase_1 PF03266.15 gi|150400111|ref|YP_001323878.1| - 0.45 10.4 7.1 6.5 6.6 0.3 3.7 4 0 0 4 4 4 0 NTPase SRP54 PF00448.22 gi|150400111|ref|YP_001323878.1| - 0.5 10.0 1.6 8.2 6.0 0.1 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain NB-ARC PF00931.22 gi|150400111|ref|YP_001323878.1| - 2.6 7.2 6.2 10 5.2 1.0 2.7 3 0 0 3 3 3 0 NB-ARC domain AAA_19 PF13245.6 gi|150400111|ref|YP_001323878.1| - 3.2 8.1 4.6 33 4.8 0.3 3.2 3 0 0 3 3 3 0 AAA domain S_layer_N PF05123.12 gi|150400112|ref|YP_001323879.1| - 1.1e-81 274.9 17.0 1.1e-81 274.9 17.0 2.0 2 0 0 2 2 2 1 S-layer like family, N-terminal region S_layer_C PF05124.12 gi|150400112|ref|YP_001323879.1| - 1.5e-66 224.6 8.6 1.5e-66 224.6 8.6 2.3 2 0 0 2 2 2 1 S-layer like family, C-terminal region DUF2116 PF09889.9 gi|150400113|ref|YP_001323880.1| - 5.8e-26 90.3 4.0 6.2e-26 90.2 4.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein containing a Zn-ribbon (DUF2116) TMCO5 PF14992.6 gi|150400113|ref|YP_001323880.1| - 0.019 14.6 0.3 0.019 14.6 0.3 1.0 1 0 0 1 1 1 0 TMCO5 family DUF5345 PF17280.2 gi|150400113|ref|YP_001323880.1| - 0.024 14.6 0.1 0.025 14.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5345) NCD3G PF07562.14 gi|150400113|ref|YP_001323880.1| - 0.026 14.5 2.6 0.05 13.6 0.4 2.0 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR AA_kinase PF00696.28 gi|150400114|ref|YP_001323881.1| - 5e-29 101.6 3.3 1.1e-28 100.4 3.3 1.5 1 1 0 1 1 1 1 Amino acid kinase family Mur_ligase_C PF02875.21 gi|150400114|ref|YP_001323881.1| - 0.0047 17.1 0.1 0.19 12.0 0.0 2.4 2 1 0 2 2 2 1 Mur ligase family, glutamate ligase domain Abhydrolase_5 PF12695.7 gi|150400114|ref|YP_001323881.1| - 0.049 13.4 0.4 12 5.6 0.0 2.4 2 1 0 2 2 2 0 Alpha/beta hydrolase family CBFD_NFYB_HMF PF00808.23 gi|150400115|ref|YP_001323882.1| - 1.3e-20 73.4 2.8 1.4e-20 73.3 2.8 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|150400115|ref|YP_001323882.1| - 8.8e-11 42.3 0.5 9.3e-11 42.2 0.5 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 gi|150400115|ref|YP_001323882.1| - 9.5e-07 28.9 0.3 9.7e-07 28.9 0.3 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 gi|150400115|ref|YP_001323882.1| - 2.7e-06 27.7 0.2 3.3e-06 27.4 0.2 1.2 1 0 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 gi|150400115|ref|YP_001323882.1| - 1e-05 25.6 0.1 1.1e-05 25.5 0.1 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TAF PF02969.17 gi|150400115|ref|YP_001323882.1| - 1.5e-05 25.0 1.2 1.5e-05 25.0 1.2 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) Bromo_TP PF07524.13 gi|150400115|ref|YP_001323882.1| - 0.001 19.0 0.0 0.0012 18.8 0.0 1.1 1 0 0 1 1 1 1 Bromodomain associated TFIID_20kDa PF03847.13 gi|150400115|ref|YP_001323882.1| - 0.0014 19.1 0.6 0.0015 19.0 0.6 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A TFIID-18kDa PF02269.16 gi|150400115|ref|YP_001323882.1| - 0.0054 16.7 0.1 0.0056 16.7 0.1 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit Rap1a PF18602.1 gi|150400115|ref|YP_001323882.1| - 0.03 14.7 0.1 0.053 13.8 0.1 1.4 1 0 0 1 1 1 0 Rap1a immunity proteins MU2_FHA PF18221.1 gi|150400115|ref|YP_001323882.1| - 0.035 14.1 0.1 0.038 14.0 0.1 1.2 1 0 0 1 1 1 0 Mutator 2 Fork head associated domain Peptidase_S24 PF00717.23 gi|150400116|ref|YP_001323883.1| - 0.0014 18.5 3.6 0.0027 17.6 1.6 2.3 2 1 1 3 3 3 1 Peptidase S24-like FAD_binding_3 PF01494.19 gi|150400117|ref|YP_001323884.1| - 1.2e-17 64.3 0.0 3.7e-07 29.7 0.0 3.1 3 0 0 3 3 3 3 FAD binding domain Trp_halogenase PF04820.14 gi|150400117|ref|YP_001323884.1| - 2.1e-09 36.7 0.0 1.3e-05 24.3 0.0 2.3 2 1 0 2 2 2 2 Tryptophan halogenase HI0933_like PF03486.14 gi|150400117|ref|YP_001323884.1| - 2.2e-08 33.2 3.2 2e-07 30.1 0.1 2.5 3 0 0 3 3 3 1 HI0933-like protein Lycopene_cycl PF05834.12 gi|150400117|ref|YP_001323884.1| - 1.2e-07 31.1 0.0 6.6e-05 22.1 0.0 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein FAD_oxidored PF12831.7 gi|150400117|ref|YP_001323884.1| - 1.4e-07 31.2 0.4 2.5e-07 30.4 0.4 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|150400117|ref|YP_001323884.1| - 3.8e-07 29.6 2.9 0.00027 20.3 0.1 2.0 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|150400117|ref|YP_001323884.1| - 2.9e-06 26.6 0.2 5.4e-06 25.7 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|150400117|ref|YP_001323884.1| - 4.9e-06 26.4 0.2 0.0029 17.2 0.0 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase GIDA PF01134.22 gi|150400117|ref|YP_001323884.1| - 8.9e-06 25.0 0.9 9.1e-06 25.0 0.1 1.6 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|150400117|ref|YP_001323884.1| - 6.7e-05 23.0 0.0 0.00023 21.3 0.0 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|150400117|ref|YP_001323884.1| - 0.00023 20.5 2.6 0.0026 17.1 2.6 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|150400117|ref|YP_001323884.1| - 0.00046 19.5 0.2 0.0018 17.5 0.1 2.0 2 0 0 2 2 2 1 Thi4 family SE PF08491.10 gi|150400117|ref|YP_001323884.1| - 0.046 12.8 0.0 0.08 12.0 0.0 1.3 1 0 0 1 1 1 0 Squalene epoxidase Pyr_redox PF00070.27 gi|150400117|ref|YP_001323884.1| - 0.25 11.9 1.4 0.88 10.2 0.0 2.6 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Fer4 PF00037.27 gi|150400118|ref|YP_001323885.1| - 3.7e-13 48.7 14.7 1e-06 28.3 3.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150400118|ref|YP_001323885.1| - 7.9e-08 32.3 11.1 8.9e-08 32.2 11.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|150400118|ref|YP_001323885.1| - 3e-07 30.1 12.5 0.00026 20.9 1.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|150400118|ref|YP_001323885.1| - 9.4e-07 29.7 10.4 0.0058 17.5 2.9 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|150400118|ref|YP_001323885.1| - 9.5e-07 29.3 24.9 1.2e-05 25.8 13.4 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|150400118|ref|YP_001323885.1| - 1e-06 28.6 13.0 0.0017 18.3 2.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|150400118|ref|YP_001323885.1| - 2e-05 24.6 13.7 0.0025 17.9 2.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150400118|ref|YP_001323885.1| - 2.9e-05 24.1 11.5 7.3e-05 22.8 11.7 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150400118|ref|YP_001323885.1| - 0.00068 20.0 14.4 1.2 9.6 14.4 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150400118|ref|YP_001323885.1| - 0.0008 19.9 11.7 0.54 10.8 11.7 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150400118|ref|YP_001323885.1| - 0.007 16.8 15.0 0.011 16.2 2.7 2.3 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_15 PF13459.6 gi|150400118|ref|YP_001323885.1| - 0.01 16.6 6.0 0.15 12.8 0.4 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|150400118|ref|YP_001323885.1| - 0.023 15.6 18.3 0.078 13.9 5.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|150400118|ref|YP_001323885.1| - 0.084 13.4 10.0 0.94 10.1 1.9 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|150400118|ref|YP_001323885.1| - 1.4 9.1 12.9 1.4 9.1 3.1 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain NTPase_I-T PF01931.18 gi|150400119|ref|YP_001323886.1| - 2e-48 164.3 0.0 2.3e-48 164.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF84 Aminotran_5 PF00266.19 gi|150400120|ref|YP_001323887.1| - 1.2e-43 149.5 0.1 1.6e-43 149.1 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|150400120|ref|YP_001323887.1| - 4.7e-05 22.1 0.5 7e-05 21.5 0.5 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DUF4092 PF13322.6 gi|150400120|ref|YP_001323887.1| - 0.0004 20.3 0.1 0.0012 18.8 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4092) Aminotran_1_2 PF00155.21 gi|150400120|ref|YP_001323887.1| - 0.0013 18.0 0.4 0.032 13.4 0.4 2.4 1 1 0 1 1 1 1 Aminotransferase class I and II GARS_A PF01071.19 gi|150400121|ref|YP_001323888.1| - 5.2e-62 209.1 0.6 9.8e-62 208.2 0.6 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|150400121|ref|YP_001323888.1| - 1.1e-24 87.0 0.4 1.7e-22 80.0 0.1 2.3 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|150400121|ref|YP_001323888.1| - 9.8e-13 48.2 0.6 4.3e-12 46.1 0.0 2.3 3 0 0 3 3 3 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.6 gi|150400121|ref|YP_001323888.1| - 0.00013 21.6 0.1 0.0015 18.2 0.1 2.4 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|150400121|ref|YP_001323888.1| - 0.00072 19.6 0.0 0.0018 18.3 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|150400121|ref|YP_001323888.1| - 0.028 13.9 0.0 0.093 12.2 0.1 1.8 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_ST PF14397.6 gi|150400121|ref|YP_001323888.1| - 0.032 13.5 0.0 0.2 10.9 0.1 2.1 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp DpaA_N PF16924.5 gi|150400121|ref|YP_001323888.1| - 0.1 12.7 0.0 0.35 11.0 0.0 2.0 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain Metallophos_2 PF12850.7 gi|150400122|ref|YP_001323889.1| - 5e-32 111.4 0.1 5.8e-32 111.2 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|150400122|ref|YP_001323889.1| - 1.7e-09 38.5 7.9 1.4e-07 32.2 7.9 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|150400122|ref|YP_001323889.1| - 0.00037 19.9 1.0 0.074 12.4 0.1 2.3 1 1 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily HEM4 PF02602.15 gi|150400123|ref|YP_001323890.1| - 7.4e-35 120.4 0.0 9.6e-35 120.0 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD RnlA_toxin PF15935.5 gi|150400123|ref|YP_001323890.1| - 0.00042 20.2 0.4 0.00095 19.0 0.0 1.7 2 0 0 2 2 2 1 RNase LS, bacterial toxin HEPN_RnaseLS PF18869.1 gi|150400123|ref|YP_001323890.1| - 0.014 15.5 0.0 0.026 14.6 0.0 1.4 1 0 0 1 1 1 0 RnaseLS-like HEPN RHD3 PF05879.12 gi|150400123|ref|YP_001323890.1| - 0.016 13.4 0.2 0.02 13.1 0.2 1.1 1 0 0 1 1 1 0 Root hair defective 3 GTP-binding protein (RHD3) Enolase_C PF00113.22 gi|150400125|ref|YP_001323892.1| - 1.9e-123 411.5 1.1 2.7e-123 411.0 1.1 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|150400125|ref|YP_001323892.1| - 7.2e-56 188.0 0.1 1.4e-55 187.1 0.1 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|150400125|ref|YP_001323892.1| - 3.7e-06 26.7 0.0 5.7e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|150400125|ref|YP_001323892.1| - 0.0003 20.1 0.4 0.0007 18.8 0.0 1.7 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus ETM PF17577.2 gi|150400125|ref|YP_001323892.1| - 0.13 12.9 0.0 0.27 11.8 0.0 1.5 1 0 0 1 1 1 0 ECORI-T site tRNA-synt_2c PF01411.19 gi|150400126|ref|YP_001323893.1| - 4.9e-134 447.9 0.9 9.1e-134 447.0 0.9 1.4 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|150400126|ref|YP_001323893.1| - 1.6e-14 53.7 0.6 4e-14 52.4 0.6 1.8 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.19 gi|150400126|ref|YP_001323893.1| - 4.1e-09 37.0 3.9 4.1e-09 37.0 3.9 2.0 2 0 0 2 2 2 1 DHHA1 domain tRNA-synt_2e PF02091.15 gi|150400126|ref|YP_001323893.1| - 3.1e-06 26.6 0.1 6.4e-06 25.6 0.1 1.5 1 0 0 1 1 1 1 Glycyl-tRNA synthetase alpha subunit GHMP_kinases_N PF00288.26 gi|150400127|ref|YP_001323894.1| - 2.6e-06 27.5 0.0 5.2e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|150400127|ref|YP_001323894.1| - 0.0052 17.1 0.0 0.013 15.8 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal Peptidase_M48 PF01435.18 gi|150400128|ref|YP_001323895.1| - 9.5e-42 143.0 0.9 1.1e-41 142.8 0.1 1.4 2 0 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|150400128|ref|YP_001323895.1| - 2.4e-06 27.0 0.2 4.3e-06 26.1 0.2 1.4 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF3341 PF11821.8 gi|150400128|ref|YP_001323895.1| - 0.058 13.0 2.4 0.55 9.9 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3341) DUF2207 PF09972.9 gi|150400128|ref|YP_001323895.1| - 1.6 7.4 6.0 1.6 7.4 0.0 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF5612 PF18462.1 gi|150400129|ref|YP_001323896.1| - 2e-74 248.2 2.8 2.6e-74 247.7 2.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5612) ACT PF01842.25 gi|150400129|ref|YP_001323896.1| - 1.5e-08 34.2 0.1 1.4e-06 28.0 0.0 2.5 2 1 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|150400129|ref|YP_001323896.1| - 0.00012 22.6 0.1 0.00027 21.4 0.1 1.7 1 0 0 1 1 1 1 ACT domain ACT_6 PF13740.6 gi|150400129|ref|YP_001323896.1| - 0.018 15.0 0.0 0.04 13.9 0.0 1.6 1 0 0 1 1 1 0 ACT domain DUF4951 PF16309.5 gi|150400129|ref|YP_001323896.1| - 0.079 13.0 0.1 0.16 12.1 0.1 1.5 1 0 0 1 1 1 0 Domian of unknown function (DUF4951) Meth_synt_2 PF01717.18 gi|150400130|ref|YP_001323897.1| - 3.5e-44 151.4 0.0 5.9e-44 150.7 0.0 1.4 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 gi|150400130|ref|YP_001323897.1| - 0.004 16.7 0.1 0.0058 16.2 0.1 1.2 1 0 0 1 1 1 1 Cobalamin-independent synthase, N-terminal domain URO-D PF01208.17 gi|150400130|ref|YP_001323897.1| - 0.028 13.6 0.1 0.092 11.9 0.1 1.9 1 1 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) HTH_24 PF13412.6 gi|150400131|ref|YP_001323898.1| - 6e-10 38.5 0.4 2.4e-09 36.6 0.4 2.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|150400131|ref|YP_001323898.1| - 5e-07 29.5 0.1 1.6e-06 27.9 0.1 1.8 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|150400131|ref|YP_001323898.1| - 3.4e-06 26.7 0.0 9e-06 25.4 0.0 1.7 2 0 0 2 2 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|150400131|ref|YP_001323898.1| - 1.4e-05 25.0 0.1 3.3e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|150400131|ref|YP_001323898.1| - 1.7e-05 24.6 0.0 3.5e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|150400131|ref|YP_001323898.1| - 0.00037 20.3 0.7 0.0042 16.9 0.1 2.5 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HemX PF04375.14 gi|150400131|ref|YP_001323898.1| - 0.00049 19.5 4.2 0.0062 15.9 0.2 2.1 1 1 1 2 2 2 1 HemX, putative uroporphyrinogen-III C-methyltransferase TrmB PF01978.19 gi|150400131|ref|YP_001323898.1| - 0.0005 19.9 1.7 0.0014 18.4 0.1 2.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB PilO PF04350.13 gi|150400131|ref|YP_001323898.1| - 0.0068 16.6 3.5 0.0068 16.6 3.5 2.9 3 1 1 4 4 3 1 Pilus assembly protein, PilO MAD PF05557.13 gi|150400131|ref|YP_001323898.1| - 0.0087 14.5 21.5 0.013 13.9 21.5 1.1 1 0 0 1 1 1 1 Mitotic checkpoint protein ApoLp-III PF07464.11 gi|150400131|ref|YP_001323898.1| - 0.01 15.9 7.1 0.034 14.2 6.7 2.2 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) TMF_TATA_bd PF12325.8 gi|150400131|ref|YP_001323898.1| - 0.011 16.0 18.6 0.26 11.5 18.6 2.7 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Uso1_p115_C PF04871.13 gi|150400131|ref|YP_001323898.1| - 0.025 14.9 13.2 0.048 14.0 13.2 1.4 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF2935 PF11155.8 gi|150400131|ref|YP_001323898.1| - 0.026 14.9 6.5 1.3 9.4 6.5 2.6 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) Exonuc_VII_L PF02601.15 gi|150400131|ref|YP_001323898.1| - 0.03 13.9 5.5 0.047 13.3 5.5 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit UPF0242 PF06785.11 gi|150400131|ref|YP_001323898.1| - 0.031 14.4 21.7 0.36 10.9 21.5 2.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HTH_17 PF12728.7 gi|150400131|ref|YP_001323898.1| - 0.037 14.2 0.1 2.5 8.4 0.1 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Phage_rep_O PF04492.13 gi|150400131|ref|YP_001323898.1| - 0.038 14.6 1.5 0.12 13.0 0.3 2.3 2 0 0 2 2 2 0 Bacteriophage replication protein O Cdc6_C PF09079.11 gi|150400131|ref|YP_001323898.1| - 0.039 13.9 0.1 0.092 12.7 0.1 1.6 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain CENP-K PF11802.8 gi|150400131|ref|YP_001323898.1| - 0.042 13.4 14.1 0.069 12.7 14.1 1.4 1 0 0 1 1 1 0 Centromere-associated protein K GAS PF13851.6 gi|150400131|ref|YP_001323898.1| - 0.042 13.2 25.3 0.2 11.0 15.6 2.6 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Penicillinase_R PF03965.16 gi|150400131|ref|YP_001323898.1| - 0.059 13.7 2.1 0.1 13.0 0.2 2.3 2 0 0 2 2 2 0 Penicillinase repressor HTH_37 PF13744.6 gi|150400131|ref|YP_001323898.1| - 0.07 13.1 1.4 0.17 11.9 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain SPATA24 PF15175.6 gi|150400131|ref|YP_001323898.1| - 0.072 13.0 15.1 0.082 12.8 11.0 2.2 1 1 1 2 2 2 0 Spermatogenesis-associated protein 24 MnmE_helical PF12631.7 gi|150400131|ref|YP_001323898.1| - 0.076 13.2 7.2 0.15 12.2 7.2 1.5 1 1 0 1 1 1 0 MnmE helical domain Cep57_MT_bd PF06657.13 gi|150400131|ref|YP_001323898.1| - 0.076 13.5 14.8 0.16 12.4 4.2 3.1 2 1 1 3 3 2 0 Centrosome microtubule-binding domain of Cep57 Glyco_H_20C_C PF18088.1 gi|150400131|ref|YP_001323898.1| - 0.086 12.7 6.4 0.17 11.7 6.1 1.6 1 1 0 1 1 1 0 Glycoside Hydrolase 20C C-terminal domain HTH_36 PF13730.6 gi|150400131|ref|YP_001323898.1| - 0.1 12.6 0.0 0.3 11.1 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3450 PF11932.8 gi|150400131|ref|YP_001323898.1| - 0.1 11.9 11.7 0.19 11.0 10.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF501 PF04417.12 gi|150400131|ref|YP_001323898.1| - 0.17 11.7 1.9 1.6 8.6 0.0 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF501) Mt_ATP-synt_B PF05405.14 gi|150400131|ref|YP_001323898.1| - 0.18 11.5 10.6 0.2 11.3 9.2 1.8 1 1 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Fzo_mitofusin PF04799.13 gi|150400131|ref|YP_001323898.1| - 0.24 10.9 10.3 0.39 10.2 2.7 2.4 2 0 0 2 2 2 0 fzo-like conserved region Spc7 PF08317.11 gi|150400131|ref|YP_001323898.1| - 0.28 10.0 20.5 0.57 9.0 18.3 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein V_ATPase_I PF01496.19 gi|150400131|ref|YP_001323898.1| - 0.39 8.6 9.7 0.57 8.0 9.7 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ATG16 PF08614.11 gi|150400131|ref|YP_001323898.1| - 0.45 10.7 15.8 1.9 8.6 3.6 2.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) TACC_C PF05010.14 gi|150400131|ref|YP_001323898.1| - 0.5 10.1 19.6 1.5 8.5 7.2 2.3 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Syntaxin-6_N PF09177.11 gi|150400131|ref|YP_001323898.1| - 0.52 10.9 11.9 0.67 10.5 3.8 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF4407 PF14362.6 gi|150400131|ref|YP_001323898.1| - 0.55 9.5 2.8 1 8.6 2.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HMMR_C PF15908.5 gi|150400131|ref|YP_001323898.1| - 0.67 10.2 12.4 1.7 8.9 12.4 1.7 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal FliD_N PF02465.18 gi|150400131|ref|YP_001323898.1| - 0.71 10.6 9.6 0.19 12.4 5.4 2.3 2 1 0 2 2 1 0 Flagellar hook-associated protein 2 N-terminus DUF724 PF05266.14 gi|150400131|ref|YP_001323898.1| - 0.81 9.5 13.2 3.5 7.4 0.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF724) LMBR1 PF04791.16 gi|150400131|ref|YP_001323898.1| - 0.97 8.3 7.8 1.8 7.4 7.8 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein IZUMO PF15005.6 gi|150400131|ref|YP_001323898.1| - 1.1 9.8 6.5 3 8.3 6.5 1.9 1 1 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated BLOC1_2 PF10046.9 gi|150400131|ref|YP_001323898.1| - 1.2 9.5 15.1 3.1 8.2 5.5 2.8 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Prominin PF05478.11 gi|150400131|ref|YP_001323898.1| - 1.8 6.4 16.1 0.029 12.3 8.6 1.8 3 0 0 3 3 3 0 Prominin XLF PF09302.11 gi|150400131|ref|YP_001323898.1| - 1.8 8.7 15.1 5.7 7.1 9.9 3.4 2 1 0 2 2 1 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component PRKG1_interact PF15898.5 gi|150400131|ref|YP_001323898.1| - 1.8 9.5 18.1 3.3 8.7 0.9 2.8 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain PCRF PF03462.18 gi|150400131|ref|YP_001323898.1| - 2 8.2 12.7 0.83 9.5 7.4 2.3 1 1 1 2 2 2 0 PCRF domain Yuri_gagarin PF15934.5 gi|150400131|ref|YP_001323898.1| - 2 8.2 17.1 5.4 6.8 17.2 1.9 1 1 0 1 1 1 0 Yuri gagarin DUF1664 PF07889.12 gi|150400131|ref|YP_001323898.1| - 2.4 8.2 11.1 1.8 8.6 0.7 3.2 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) Gp-FAR-1 PF05823.12 gi|150400131|ref|YP_001323898.1| - 2.5 8.4 12.0 10 6.5 10.2 2.5 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) HMMR_N PF15905.5 gi|150400131|ref|YP_001323898.1| - 2.8 7.3 24.8 2.5 7.5 8.1 1.7 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal COX16 PF14138.6 gi|150400131|ref|YP_001323898.1| - 2.9 8.5 7.7 24 5.5 6.2 3.0 2 1 0 2 2 2 0 Cytochrome c oxidase assembly protein COX16 NPV_P10 PF05531.12 gi|150400131|ref|YP_001323898.1| - 3.1 8.3 6.1 4.4 7.8 1.1 3.3 2 1 1 3 3 2 0 Nucleopolyhedrovirus P10 protein Sec2p PF06428.11 gi|150400131|ref|YP_001323898.1| - 4.4 7.3 16.1 2.9 7.9 5.6 3.1 1 1 2 3 3 3 0 GDP/GTP exchange factor Sec2p FlxA PF14282.6 gi|150400131|ref|YP_001323898.1| - 5.5 7.0 12.1 5.5 7.0 3.1 3.0 1 1 1 2 2 2 0 FlxA-like protein FAM76 PF16046.5 gi|150400131|ref|YP_001323898.1| - 5.7 6.2 16.0 0.51 9.7 4.4 2.2 1 1 1 2 2 2 0 FAM76 protein DUF2570 PF10828.8 gi|150400131|ref|YP_001323898.1| - 6.3 6.7 10.1 2.3 8.0 2.1 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) Occludin_ELL PF07303.13 gi|150400131|ref|YP_001323898.1| - 6.3 7.6 13.8 5.7 7.7 4.5 2.5 1 1 1 2 2 2 0 Occludin homology domain Fib_alpha PF08702.10 gi|150400131|ref|YP_001323898.1| - 8 6.6 18.1 0.38 10.9 11.2 2.4 2 1 0 2 2 1 0 Fibrinogen alpha/beta chain family YtxH PF12732.7 gi|150400131|ref|YP_001323898.1| - 8.6 7.0 9.0 1.6 9.3 2.3 2.7 3 0 0 3 3 2 0 YtxH-like protein His_Phos_1 PF00300.22 gi|150400132|ref|YP_001323899.1| - 6.2e-34 117.4 0.0 3e-16 59.7 0.0 2.0 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) Glyco_tran_28_C PF04101.16 gi|150400133|ref|YP_001323900.1| - 5.7e-22 78.5 0.1 9.9e-22 77.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 gi|150400133|ref|YP_001323900.1| - 5.8e-21 75.1 0.0 8.9e-21 74.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 1 UDPGT PF00201.18 gi|150400133|ref|YP_001323900.1| - 4.9e-09 35.5 0.0 7.8e-09 34.8 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glycos_transf_1 PF00534.20 gi|150400133|ref|YP_001323900.1| - 0.00057 19.5 0.2 0.0011 18.5 0.2 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_28 PF03033.20 gi|150400133|ref|YP_001323900.1| - 0.00099 19.2 0.0 0.0022 18.0 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Epimerase_2 PF02350.19 gi|150400133|ref|YP_001323900.1| - 0.0014 17.5 0.0 0.0025 16.7 0.0 1.4 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_1_4 PF13692.6 gi|150400133|ref|YP_001323900.1| - 0.0077 16.7 0.0 0.023 15.1 0.0 1.8 1 1 1 2 2 2 1 Glycosyl transferases group 1 SeqA PF03925.13 gi|150400133|ref|YP_001323900.1| - 0.0094 15.9 0.2 0.022 14.7 0.2 1.6 1 0 0 1 1 1 1 SeqA protein C-terminal domain UPF0052 PF01933.18 gi|150400134|ref|YP_001323901.1| - 1.2e-45 156.0 0.1 1.4e-45 155.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 DUF1699 PF08004.11 gi|150400134|ref|YP_001323901.1| - 0.0076 15.9 0.2 0.017 14.8 0.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) GCH_III PF05165.12 gi|150400135|ref|YP_001323902.1| - 8.9e-110 365.8 0.1 1e-109 365.6 0.1 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase III mCpol PF18182.1 gi|150400135|ref|YP_001323902.1| - 0.02 15.2 0.1 0.059 13.7 0.1 1.8 2 0 0 2 2 2 0 minimal CRISPR polymerase domain ALIX_LYPXL_bnd PF13949.6 gi|150400135|ref|YP_001323902.1| - 0.024 13.9 0.1 1.7 7.8 0.3 2.1 2 0 0 2 2 2 0 ALIX V-shaped domain binding to HIV RQC PF09382.10 gi|150400135|ref|YP_001323902.1| - 0.13 12.1 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 RQC domain Dus PF01207.17 gi|150400136|ref|YP_001323903.1| - 4.4e-06 26.0 0.2 3.7e-05 23.0 0.2 2.3 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) DAHP_synth_1 PF00793.20 gi|150400136|ref|YP_001323903.1| - 0.022 13.6 0.0 2.1 7.2 0.0 2.5 2 1 0 2 2 2 0 DAHP synthetase I family DUF655 PF04919.12 gi|150400136|ref|YP_001323903.1| - 0.037 14.0 1.1 0.26 11.2 0.0 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF655) CBS PF00571.28 gi|150400137|ref|YP_001323904.1| - 1.7e-31 108.4 3.0 7.5e-17 61.5 0.2 2.1 2 0 0 2 2 2 2 CBS domain CAAD PF14159.6 gi|150400137|ref|YP_001323904.1| - 0.023 14.5 0.1 2.6 7.9 0.0 2.3 1 1 0 2 2 2 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DUF1611 PF07755.11 gi|150400138|ref|YP_001323905.1| - 3.6e-37 127.6 0.1 4.9e-37 127.2 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1611_C) P-loop domain DUF1611_N PF17396.2 gi|150400138|ref|YP_001323905.1| - 7.9e-10 38.8 0.0 1.7e-09 37.8 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1611_N) Rossmann-like domain Mei5_like PF17021.5 gi|150400138|ref|YP_001323905.1| - 0.013 15.5 1.0 0.56 10.3 0.0 3.0 3 0 0 3 3 3 0 Putative double-strand recombination repair-like GMC_oxred_C PF05199.13 gi|150400139|ref|YP_001323906.1| - 1.3e-09 38.8 0.0 1.9e-09 38.2 0.0 1.3 1 0 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 gi|150400139|ref|YP_001323906.1| - 1.6e-06 28.0 0.0 4.3e-06 26.6 0.0 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase GMC_oxred_N PF00732.19 gi|150400139|ref|YP_001323906.1| - 0.00017 21.0 0.0 0.0041 16.5 0.0 2.5 3 0 0 3 3 3 1 GMC oxidoreductase Pyr_redox_2 PF07992.14 gi|150400139|ref|YP_001323906.1| - 0.0021 17.3 0.2 0.12 11.6 0.1 2.9 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|150400139|ref|YP_001323906.1| - 0.0033 16.6 0.0 0.011 14.8 0.0 1.8 1 1 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.6 gi|150400139|ref|YP_001323906.1| - 0.0055 15.9 0.0 0.11 11.6 0.0 2.1 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 gi|150400139|ref|YP_001323906.1| - 0.011 16.0 0.0 0.052 13.8 0.0 2.2 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Fer4_2 PF12797.7 gi|150400139|ref|YP_001323906.1| - 0.023 14.8 1.9 0.045 13.9 1.9 1.5 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4 PF00037.27 gi|150400139|ref|YP_001323906.1| - 0.025 14.4 0.4 0.046 13.5 0.4 1.5 1 0 0 1 1 1 0 4Fe-4S binding domain Mqo PF06039.15 gi|150400139|ref|YP_001323906.1| - 0.034 12.7 0.1 0.31 9.5 0.0 2.0 2 0 0 2 2 2 0 Malate:quinone oxidoreductase (Mqo) Ribosomal_L5_C PF00673.21 gi|150400139|ref|YP_001323906.1| - 0.084 13.1 0.1 0.23 11.7 0.1 1.7 1 0 0 1 1 1 0 ribosomal L5P family C-terminus Pribosyltran_N PF13793.6 gi|150400140|ref|YP_001323907.1| - 7.5e-30 103.3 0.1 8.4e-26 90.2 0.1 2.3 2 0 0 2 2 2 2 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|150400140|ref|YP_001323907.1| - 5.1e-21 74.8 0.5 5e-19 68.4 0.3 2.3 2 0 0 2 2 2 2 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|150400140|ref|YP_001323907.1| - 1.2e-11 45.0 1.2 1.1e-08 35.4 0.7 2.2 2 0 0 2 2 2 2 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|150400140|ref|YP_001323907.1| - 2.9e-05 23.6 0.2 0.0001 21.8 0.1 1.8 2 0 0 2 2 2 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|150400140|ref|YP_001323907.1| - 0.022 14.3 0.1 0.11 12.0 0.1 2.0 1 1 0 1 1 1 0 Phosphoribosyl transferase TPP_enzyme_N PF02776.18 gi|150400141|ref|YP_001323908.1| - 2.8e-09 36.8 0.0 2.9e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain POR_N PF01855.19 gi|150400141|ref|YP_001323908.1| - 4.5e-07 29.9 0.0 6.3e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg UPF0004 PF00919.20 gi|150400142|ref|YP_001323909.1| - 6.8e-21 74.2 0.6 1.6e-20 73.0 0.6 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 Radical_SAM PF04055.21 gi|150400142|ref|YP_001323909.1| - 7.4e-20 72.0 0.3 2.1e-19 70.5 0.1 1.8 2 0 0 2 2 2 1 Radical SAM superfamily TRAM PF01938.20 gi|150400142|ref|YP_001323909.1| - 2e-06 27.7 0.1 6.2e-06 26.1 0.1 1.9 1 0 0 1 1 1 1 TRAM domain TRAM_2 PF18693.1 gi|150400142|ref|YP_001323909.1| - 0.0088 16.2 0.0 0.067 13.4 0.0 2.5 1 1 0 1 1 1 1 TRAM domain HECW1_helix PF18436.1 gi|150400142|ref|YP_001323909.1| - 0.021 14.9 0.0 1.6 8.9 0.0 2.7 2 0 0 2 2 2 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 DMRL_synthase PF00885.19 gi|150400142|ref|YP_001323909.1| - 0.11 12.3 0.0 39 4.0 0.0 3.2 3 0 0 3 3 3 0 6,7-dimethyl-8-ribityllumazine synthase MCPsignal PF00015.21 gi|150400143|ref|YP_001323910.1| - 1.8e-35 122.3 48.4 2.3e-32 112.2 15.9 5.2 1 1 3 5 5 5 4 Methyl-accepting chemotaxis protein (MCP) signalling domain sCache_3_3 PF17202.4 gi|150400143|ref|YP_001323910.1| - 2.3e-30 105.2 1.0 2.3e-30 105.2 1.0 3.0 3 0 0 3 3 3 1 Single cache domain 3 Cache_3-Cache_2 PF17201.4 gi|150400143|ref|YP_001323910.1| - 1.6e-19 70.3 2.5 1.6e-19 70.3 2.5 3.7 2 2 0 3 3 3 1 Cache 3/Cache 2 fusion domain HAMP PF00672.25 gi|150400143|ref|YP_001323910.1| - 8.8e-17 61.2 0.3 6.8e-13 48.8 0.0 4.2 5 0 0 5 5 4 1 HAMP domain dCache_3 PF14827.6 gi|150400143|ref|YP_001323910.1| - 1.1e-16 61.3 1.5 1.1e-16 61.3 1.5 2.6 2 1 0 2 2 2 1 Double sensory domain of two-component sensor kinase dCache_1 PF02743.18 gi|150400143|ref|YP_001323910.1| - 1.1e-06 28.6 4.2 1.1e-06 28.6 4.2 4.6 3 2 2 5 5 5 1 Cache domain sCache_3_2 PF17203.4 gi|150400143|ref|YP_001323910.1| - 1.4e-06 28.4 9.0 0.00012 22.2 0.2 4.1 2 2 2 4 4 4 1 Single cache domain 3 WXG100 PF06013.12 gi|150400143|ref|YP_001323910.1| - 2.4e-05 24.4 19.5 0.0073 16.5 3.2 5.8 4 2 1 5 5 5 1 Proteins of 100 residues with WXG T7SS_ESX_EspC PF10824.8 gi|150400143|ref|YP_001323910.1| - 0.0015 19.0 11.8 0.18 12.3 2.6 4.8 4 2 0 4 4 4 1 Excreted virulence factor EspC, type VII ESX diderm DUF948 PF06103.11 gi|150400143|ref|YP_001323910.1| - 0.0017 18.6 39.1 0.98 9.7 0.2 6.6 2 1 3 5 5 4 2 Bacterial protein of unknown function (DUF948) Collagen_mid PF15984.5 gi|150400143|ref|YP_001323910.1| - 0.008 15.9 0.9 0.008 15.9 0.9 2.9 3 1 0 3 3 3 1 Bacterial collagen, middle region DUF885 PF05960.11 gi|150400143|ref|YP_001323910.1| - 0.058 13.0 10.0 0.015 15.0 4.6 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF885) DUF1664 PF07889.12 gi|150400143|ref|YP_001323910.1| - 0.061 13.4 35.6 0.083 12.9 2.5 5.3 2 2 3 5 5 5 0 Protein of unknown function (DUF1664) ArAE_2 PF10334.9 gi|150400143|ref|YP_001323910.1| - 0.096 12.5 3.7 0.65 9.8 0.1 2.7 2 1 1 3 3 3 0 Aromatic acid exporter family member 2 Multi_Drug_Res PF00893.19 gi|150400143|ref|YP_001323910.1| - 0.12 13.0 0.8 0.3 11.8 0.0 2.0 2 0 0 2 2 1 0 Small Multidrug Resistance protein EzrA PF06160.12 gi|150400143|ref|YP_001323910.1| - 0.18 9.9 45.2 1.5 6.9 39.3 4.5 2 1 0 2 2 2 0 Septation ring formation regulator, EzrA SpecificRecomb PF10136.9 gi|150400143|ref|YP_001323910.1| - 0.2 9.9 7.8 0.025 12.9 3.3 1.7 2 0 0 2 2 2 0 Site-specific recombinase Snapin_Pallidin PF14712.6 gi|150400143|ref|YP_001323910.1| - 1.2 9.6 23.8 8.5 6.9 1.8 5.9 4 2 2 6 6 6 0 Snapin/Pallidin YscO PF07321.12 gi|150400143|ref|YP_001323910.1| - 1.4 8.9 11.8 1.5 8.8 0.5 3.0 3 0 0 3 3 3 0 Type III secretion protein YscO Jnk-SapK_ap_N PF09744.9 gi|150400143|ref|YP_001323910.1| - 1.9 8.7 23.1 0.024 14.9 7.0 3.5 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 Syntaxin_2 PF14523.6 gi|150400143|ref|YP_001323910.1| - 3 8.3 37.6 2.3 8.7 2.1 6.8 1 1 5 6 6 6 0 Syntaxin-like protein TMPIT PF07851.13 gi|150400143|ref|YP_001323910.1| - 4.1 6.5 28.7 0.28 10.4 3.7 4.1 2 1 3 5 5 5 0 TMPIT-like protein APG17 PF04108.12 gi|150400143|ref|YP_001323910.1| - 4.3 6.4 29.1 2.4 7.2 14.1 3.6 1 1 1 2 2 1 0 Autophagy protein Apg17 YojJ PF10372.9 gi|150400143|ref|YP_001323910.1| - 4.4 7.5 12.0 1.8 8.7 0.2 4.5 5 0 0 5 5 3 0 Bacterial membrane-spanning protein N-terminus IMPa_helical PF18642.1 gi|150400143|ref|YP_001323910.1| - 8.4 6.9 7.3 7.1 7.1 0.0 3.9 4 1 1 5 5 4 0 Immunomodulating metalloprotease helical domain T3SSipB PF16535.5 gi|150400143|ref|YP_001323910.1| - 9.1 6.7 30.8 0.61 10.5 9.9 3.7 3 1 1 4 4 3 0 Type III cell invasion protein SipB tRNA-Thr_ED PF08915.11 gi|150400144|ref|YP_001323911.1| - 3.5e-52 176.1 0.1 6.8e-52 175.2 0.1 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|150400144|ref|YP_001323911.1| - 5.7e-21 74.5 2.8 2.7e-20 72.3 0.9 2.4 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|150400144|ref|YP_001323911.1| - 3.8e-15 56.3 0.0 2.5e-14 53.6 0.0 2.3 2 1 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) TIR_2 PF13676.6 gi|150400144|ref|YP_001323911.1| - 0.11 13.1 0.1 0.34 11.5 0.0 1.9 2 0 0 2 2 2 0 TIR domain Peptidase_M22 PF00814.25 gi|150400145|ref|YP_001323912.1| - 2.8e-84 283.0 0.0 3.9e-84 282.6 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family RIO1 PF01163.22 gi|150400145|ref|YP_001323912.1| - 1.3e-05 24.8 0.0 2.4e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 gi|150400145|ref|YP_001323912.1| - 2.4e-05 23.8 0.0 4.1e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 gi|150400145|ref|YP_001323912.1| - 4.8e-05 22.9 1.9 8.9e-05 22.0 1.9 1.4 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|150400145|ref|YP_001323912.1| - 0.0029 17.5 0.0 0.011 15.7 0.1 1.5 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 gi|150400145|ref|YP_001323912.1| - 0.006 15.9 0.3 0.012 14.9 0.1 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase His_biosynth PF00977.21 gi|150400146|ref|YP_001323913.1| - 1.3e-76 257.0 2.4 1.5e-76 256.9 2.4 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein DHO_dh PF01180.21 gi|150400146|ref|YP_001323913.1| - 4.7e-11 42.4 1.3 3.5e-05 23.2 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase Dus PF01207.17 gi|150400146|ref|YP_001323913.1| - 3e-10 39.7 0.3 0.00011 21.4 0.1 2.2 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) ThiG PF05690.14 gi|150400146|ref|YP_001323913.1| - 1.4e-08 34.4 1.4 0.00037 19.9 0.1 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 gi|150400146|ref|YP_001323913.1| - 1.7e-07 30.6 0.1 0.00039 19.5 0.0 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 gi|150400146|ref|YP_001323913.1| - 1.1e-05 24.7 0.4 0.0053 16.0 0.0 2.7 2 1 1 3 3 3 2 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.21 gi|150400146|ref|YP_001323913.1| - 0.00039 19.7 0.0 0.015 14.5 0.0 2.6 2 1 1 3 3 3 1 Indole-3-glycerol phosphate synthase Trp_syntA PF00290.20 gi|150400146|ref|YP_001323913.1| - 0.00041 19.3 1.7 0.03 13.2 0.5 2.1 2 0 0 2 2 2 2 Tryptophan synthase alpha chain FMN_dh PF01070.18 gi|150400146|ref|YP_001323913.1| - 0.00043 19.4 1.3 0.18 10.8 0.1 2.2 1 1 1 2 2 2 2 FMN-dependent dehydrogenase G3P_antiterm PF04309.12 gi|150400146|ref|YP_001323913.1| - 0.0019 17.6 0.5 0.28 10.6 0.0 2.3 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator TMP-TENI PF02581.17 gi|150400146|ref|YP_001323913.1| - 0.0032 16.8 0.6 0.038 13.3 0.1 2.2 2 0 0 2 2 2 1 Thiamine monophosphate synthase NMO PF03060.15 gi|150400146|ref|YP_001323913.1| - 0.0041 16.6 0.2 0.051 12.9 0.0 2.0 2 0 0 2 2 2 1 Nitronate monooxygenase QRPTase_C PF01729.19 gi|150400146|ref|YP_001323913.1| - 0.026 14.3 0.3 0.069 12.9 0.1 1.8 1 1 1 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain DNA_pol_lambd_f PF10391.9 gi|150400146|ref|YP_001323913.1| - 0.043 13.6 0.0 18 5.3 0.0 2.9 3 0 0 3 3 3 0 Fingers domain of DNA polymerase lambda PfkB PF00294.24 gi|150400147|ref|YP_001323914.1| - 7.7e-54 183.0 0.0 8.8e-54 182.8 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Hs1pro-1_C PF07014.12 gi|150400147|ref|YP_001323914.1| - 0.12 11.9 0.0 0.17 11.3 0.0 1.2 1 0 0 1 1 1 0 Hs1pro-1 protein C-terminus CBS PF00571.28 gi|150400148|ref|YP_001323915.1| - 5e-25 87.7 2.1 6.4e-12 45.7 0.0 3.1 3 0 0 3 3 3 2 CBS domain RecO_N_2 PF13114.6 gi|150400148|ref|YP_001323915.1| - 0.041 13.6 0.7 5.7 6.7 0.1 3.1 2 0 0 2 2 2 0 RecO N terminal MCR_C PF04609.12 gi|150400149|ref|YP_001323916.1| - 1.4e-111 371.9 4.3 7.4e-110 366.3 4.3 2.0 1 1 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C DUF1949 PF09186.11 gi|150400149|ref|YP_001323916.1| - 0.18 11.7 0.0 0.46 10.4 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1949) HopW1-1 PF15457.6 gi|150400149|ref|YP_001323916.1| - 0.23 10.7 0.0 3.3 6.9 0.0 2.0 2 0 0 2 2 2 0 Type III T3SS secreted effector HopW1-1/HopPmaA Cass2 PF14526.6 gi|150400150|ref|YP_001323917.1| - 0.025 14.7 0.1 0.04 14.1 0.1 1.3 1 0 0 1 1 1 0 Integron-associated effector binding protein LUD_dom PF02589.15 gi|150400151|ref|YP_001323918.1| - 2.4e-45 154.6 0.2 2.7e-45 154.4 0.2 1.0 1 0 0 1 1 1 1 LUD domain CxxCxxCC PF03692.15 gi|150400151|ref|YP_001323918.1| - 0.045 14.4 0.4 0.083 13.6 0.4 1.4 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain Rep_fac_C PF08542.11 gi|150400153|ref|YP_001323920.1| - 2.4e-24 85.6 0.1 6.8e-24 84.1 0.1 1.8 1 0 0 1 1 1 1 Replication factor C C-terminal domain DNA_pol3_delta2 PF13177.6 gi|150400153|ref|YP_001323920.1| - 1.2e-16 60.9 0.0 3.9e-13 49.5 0.0 2.4 1 1 0 1 1 1 1 DNA polymerase III, delta subunit AAA PF00004.29 gi|150400153|ref|YP_001323920.1| - 1.1e-15 58.2 0.0 2.9e-15 56.9 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|150400153|ref|YP_001323920.1| - 1.1e-08 35.2 0.0 3e-08 33.8 0.0 1.9 2 0 0 2 2 2 1 Rad17 P-loop domain RuvB_N PF05496.12 gi|150400153|ref|YP_001323920.1| - 2.5e-08 33.8 0.0 3.9e-07 30.0 0.0 2.5 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|150400153|ref|YP_001323920.1| - 3.1e-06 27.7 0.0 0.0002 21.8 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 gi|150400153|ref|YP_001323920.1| - 8.2e-06 25.9 0.0 9.1e-05 22.5 0.0 2.4 2 1 1 3 3 3 1 AAA domain Mg_chelatase PF01078.21 gi|150400153|ref|YP_001323920.1| - 3e-05 23.5 0.0 0.079 12.3 0.0 2.5 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_assoc_2 PF16193.5 gi|150400153|ref|YP_001323920.1| - 0.00011 22.4 0.0 0.00023 21.4 0.0 1.5 1 0 0 1 1 1 1 AAA C-terminal domain DNA_pol3_delta PF06144.13 gi|150400153|ref|YP_001323920.1| - 0.0008 19.2 0.0 0.0017 18.1 0.0 1.6 1 0 0 1 1 1 1 DNA polymerase III, delta subunit ResIII PF04851.15 gi|150400153|ref|YP_001323920.1| - 0.00083 19.4 0.0 0.004 17.2 0.0 2.1 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_3 PF07726.11 gi|150400153|ref|YP_001323920.1| - 0.00091 19.1 0.0 0.0017 18.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|150400153|ref|YP_001323920.1| - 0.0021 17.8 0.0 0.0044 16.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|150400153|ref|YP_001323920.1| - 0.0024 18.4 0.0 0.0042 17.6 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|150400153|ref|YP_001323920.1| - 0.014 15.7 0.2 1.8 8.8 0.2 2.6 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|150400153|ref|YP_001323920.1| - 0.019 15.0 0.1 0.5 10.4 0.1 3.0 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|150400153|ref|YP_001323920.1| - 0.022 14.5 0.0 1.3 8.7 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|150400153|ref|YP_001323920.1| - 0.061 13.7 0.0 0.17 12.3 0.0 1.8 2 0 0 2 2 1 0 RNA helicase TniB PF05621.11 gi|150400153|ref|YP_001323920.1| - 0.1 12.0 0.0 0.35 10.3 0.0 1.8 3 0 0 3 3 3 0 Bacterial TniB protein AAA_25 PF13481.6 gi|150400153|ref|YP_001323920.1| - 0.12 11.9 0.2 0.25 10.9 0.2 1.5 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|150400153|ref|YP_001323920.1| - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Oxidored_nitro PF00148.19 gi|150400154|ref|YP_001323921.1| - 4.9e-15 55.2 0.0 7.3e-15 54.6 0.0 1.3 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase DUF211 PF02680.14 gi|150400155|ref|YP_001323922.1| - 4.6e-39 132.5 2.6 5.1e-39 132.3 2.6 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 Fasciclin PF02469.22 gi|150400155|ref|YP_001323922.1| - 0.043 14.1 0.1 0.047 13.9 0.1 1.2 1 0 0 1 1 1 0 Fasciclin domain RNase_P_p30 PF01876.16 gi|150400156|ref|YP_001323923.1| - 2e-40 138.5 0.1 2.5e-40 138.3 0.1 1.0 1 0 0 1 1 1 1 RNase P subunit p30 ISPD_C PF18706.1 gi|150400156|ref|YP_001323923.1| - 0.04 13.6 0.8 0.11 12.1 0.2 1.9 2 0 0 2 2 2 0 D-ribitol-5-phosphate cytidylyltransferase C-terminal domain Lipase_GDSL_2 PF13472.6 gi|150400156|ref|YP_001323923.1| - 0.083 13.3 0.0 0.18 12.2 0.0 1.6 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family Beta-Casp PF10996.8 gi|150400157|ref|YP_001323924.1| - 9.3e-14 51.7 0.0 1.7e-13 50.8 0.0 1.4 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.27 gi|150400157|ref|YP_001323924.1| - 7.3e-13 49.0 0.0 7.1e-12 45.7 0.0 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|150400157|ref|YP_001323924.1| - 4.9e-08 32.6 0.0 8.8e-08 31.8 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain RMMBL PF07521.12 gi|150400157|ref|YP_001323924.1| - 1.2e-07 31.5 0.0 2.7e-07 30.4 0.0 1.5 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|150400157|ref|YP_001323924.1| - 1.4e-05 24.7 0.0 2.6e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain TatD_DNase PF01026.21 gi|150400158|ref|YP_001323925.1| - 1.2e-20 74.0 0.1 1.5e-20 73.7 0.1 1.1 1 0 0 1 1 1 1 TatD related DNase Nicastrin PF05450.15 gi|150400158|ref|YP_001323925.1| - 0.02 14.4 0.1 0.037 13.5 0.1 1.4 1 0 0 1 1 1 0 Nicastrin Binary_toxB PF03495.14 gi|150400158|ref|YP_001323925.1| - 0.13 12.5 0.0 0.35 11.1 0.0 1.7 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain Amidohydro_1 PF01979.20 gi|150400158|ref|YP_001323925.1| - 0.19 11.0 0.4 0.42 9.9 0.4 1.8 1 1 0 1 1 1 0 Amidohydrolase family Flavodoxin_4 PF12682.7 gi|150400159|ref|YP_001323926.1| - 2.7e-09 36.9 0.5 5e-09 36.0 0.5 1.4 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 gi|150400159|ref|YP_001323926.1| - 3.3e-08 33.4 0.1 0.00057 19.6 0.0 2.2 2 0 0 2 2 2 2 Flavodoxin domain Flavodoxin_5 PF12724.7 gi|150400159|ref|YP_001323926.1| - 2.8e-06 27.6 0.0 0.0019 18.5 0.0 2.2 2 0 0 2 2 2 2 Flavodoxin domain FMN_red PF03358.15 gi|150400159|ref|YP_001323926.1| - 6.4e-05 22.7 0.0 9.6e-05 22.2 0.0 1.3 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_1 PF00258.25 gi|150400159|ref|YP_001323926.1| - 0.0013 18.9 0.1 0.05 13.8 0.0 2.3 2 1 0 2 2 2 1 Flavodoxin RYDR_ITPR PF01365.21 gi|150400159|ref|YP_001323926.1| - 0.04 13.3 0.1 0.084 12.3 0.1 1.5 2 0 0 2 2 2 0 RIH domain Cas_APE2256 PF09651.10 gi|150400159|ref|YP_001323926.1| - 0.041 13.8 0.1 0.13 12.2 0.0 1.7 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_APE2256) DUF3929 PF13066.6 gi|150400159|ref|YP_001323926.1| - 0.042 13.9 0.1 0.39 10.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3929) Nup153 PF08604.10 gi|150400159|ref|YP_001323926.1| - 0.14 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Nucleoporin Nup153-like DUF378 PF04070.12 gi|150400160|ref|YP_001323927.1| - 2.6e-22 78.5 11.4 2.9e-22 78.3 11.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF378) RLAN PF14401.6 gi|150400161|ref|YP_001323928.1| - 2.3e-12 46.8 0.0 4.5e-12 45.9 0.0 1.5 1 1 0 1 1 1 1 RimK-like ATPgrasp N-terminal domain RimK PF08443.11 gi|150400162|ref|YP_001323929.1| - 4.1e-13 49.3 0.0 6.2e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|150400162|ref|YP_001323929.1| - 1.4e-09 37.8 0.1 2.1e-09 37.2 0.1 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_ST PF14397.6 gi|150400162|ref|YP_001323929.1| - 6.7e-06 25.6 0.4 0.055 12.7 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|150400162|ref|YP_001323929.1| - 6.8e-05 23.0 0.5 0.00023 21.3 0.5 1.8 1 1 0 1 1 1 1 ATP-grasp domain R2K_3 PF14243.6 gi|150400162|ref|YP_001323929.1| - 0.0075 16.3 0.0 0.019 15.0 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain, R2K clade family 3 R2K_2 PF18299.1 gi|150400162|ref|YP_001323929.1| - 0.026 14.4 0.0 0.045 13.6 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 2 ATPgrasp_YheCD PF14398.6 gi|150400162|ref|YP_001323929.1| - 0.086 12.1 0.0 0.39 9.9 0.0 1.9 2 0 0 2 2 2 0 YheC/D like ATP-grasp GCS2 PF04107.13 gi|150400163|ref|YP_001323930.1| - 5.5e-35 121.1 0.0 7.4e-35 120.7 0.0 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) Vanabin-2 PF11437.8 gi|150400164|ref|YP_001323931.1| - 0.52 10.5 8.1 0.81 9.9 8.1 1.3 1 0 0 1 1 1 0 Vanadium-binding protein 2 DHO_dh PF01180.21 gi|150400165|ref|YP_001323932.1| - 2.7e-83 279.6 7.8 3.1e-83 279.4 7.8 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|150400165|ref|YP_001323932.1| - 9.6e-10 38.0 0.4 1e-08 34.7 0.4 2.0 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) DUF561 PF04481.12 gi|150400165|ref|YP_001323932.1| - 2.8e-05 23.4 2.5 0.0038 16.4 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF561) NMO PF03060.15 gi|150400165|ref|YP_001323932.1| - 4.1e-05 23.1 6.8 8.5e-05 22.1 2.4 2.3 1 1 0 2 2 2 1 Nitronate monooxygenase MuF_C PF18819.1 gi|150400165|ref|YP_001323932.1| - 0.013 15.4 1.1 0.5 10.4 0.0 2.4 2 0 0 2 2 2 0 Phage MuF-C-terminal domain FMN_dh PF01070.18 gi|150400165|ref|YP_001323932.1| - 0.032 13.2 5.4 0.093 11.7 5.4 1.6 1 1 0 1 1 1 0 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|150400165|ref|YP_001323932.1| - 0.14 11.1 10.4 0.51 9.3 10.4 2.0 1 1 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain ThiG PF05690.14 gi|150400165|ref|YP_001323932.1| - 0.46 9.8 5.7 0.21 10.9 0.2 2.5 3 0 0 3 3 3 0 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 gi|150400165|ref|YP_001323932.1| - 0.47 9.8 2.2 0.46 9.8 0.4 1.9 2 0 0 2 2 2 0 Thiamine monophosphate synthase G3P_antiterm PF04309.12 gi|150400165|ref|YP_001323932.1| - 0.79 9.1 3.8 6.2 6.2 0.2 2.9 3 0 0 3 3 3 0 Glycerol-3-phosphate responsive antiterminator SHS2_Rpb7-N PF03876.17 gi|150400166|ref|YP_001323933.1| - 7.1e-18 64.8 0.1 1.3e-17 63.9 0.1 1.5 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|150400166|ref|YP_001323933.1| - 3.5e-14 52.9 1.9 8.3e-14 51.7 1.9 1.7 1 1 0 1 1 1 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.12 gi|150400166|ref|YP_001323933.1| - 0.02 15.2 0.1 0.028 14.6 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit Rpc25 Spt4 PF06093.13 gi|150400167|ref|YP_001323934.1| - 4.8e-12 45.8 1.4 1.2e-11 44.5 1.4 1.6 1 1 0 1 1 1 1 Spt4/RpoE2 zinc finger RecR PF02132.15 gi|150400167|ref|YP_001323934.1| - 0.00083 18.9 1.2 0.0012 18.4 1.2 1.2 1 0 0 1 1 1 1 RecR protein DUF359 PF04019.12 gi|150400168|ref|YP_001323935.1| - 1.6e-39 134.4 0.1 2.1e-39 134.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) DUF4911 PF16256.5 gi|150400168|ref|YP_001323935.1| - 0.0059 16.6 0.3 0.054 13.5 0.1 2.3 2 1 1 3 3 3 1 Domain of unknown function (DUF4911) Astro_capsid_p2 PF16580.5 gi|150400168|ref|YP_001323935.1| - 0.029 13.8 0.0 0.19 11.2 0.0 1.9 2 0 0 2 2 2 0 C-terminal tail of astrovirus capsid projection or spike Ribosomal_S24e PF01282.19 gi|150400169|ref|YP_001323936.1| - 2.9e-20 72.0 0.9 3.4e-20 71.8 0.9 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e UvrA_inter PF17760.1 gi|150400169|ref|YP_001323936.1| - 0.053 13.6 0.4 0.078 13.1 0.5 1.3 1 1 0 1 1 1 0 UvrA interaction domain Ribosomal_S27 PF01599.19 gi|150400170|ref|YP_001323937.1| - 1.3e-19 70.1 3.8 1.8e-19 69.6 3.8 1.2 1 0 0 1 1 1 1 Ribosomal protein S27a GFA PF04828.14 gi|150400170|ref|YP_001323937.1| - 0.0017 18.6 2.1 0.24 11.8 0.1 2.1 1 1 1 2 2 2 2 Glutathione-dependent formaldehyde-activating enzyme Nudix_N_2 PF14803.6 gi|150400170|ref|YP_001323937.1| - 0.0023 17.8 2.8 0.015 15.2 2.7 2.0 1 1 1 2 2 2 1 Nudix N-terminal Ribosomal_L37e PF01907.19 gi|150400170|ref|YP_001323937.1| - 0.0026 17.9 1.8 0.0045 17.1 1.8 1.4 1 0 0 1 1 1 1 Ribosomal protein L37e IBR PF01485.21 gi|150400170|ref|YP_001323937.1| - 0.0056 16.9 0.5 0.0078 16.4 0.5 1.3 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain DZR PF12773.7 gi|150400170|ref|YP_001323937.1| - 0.0097 15.9 0.5 0.012 15.6 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|150400170|ref|YP_001323937.1| - 0.017 15.2 1.3 0.82 9.8 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-IS66 PF13005.7 gi|150400170|ref|YP_001323937.1| - 0.018 15.5 1.0 2.9 8.4 0.1 2.2 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 Lar_restr_allev PF14354.6 gi|150400170|ref|YP_001323937.1| - 0.021 15.2 2.6 0.033 14.6 2.6 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar Spt4 PF06093.13 gi|150400170|ref|YP_001323937.1| - 0.034 14.3 1.2 0.046 13.8 1.2 1.2 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger Zn_Tnp_IS1595 PF12760.7 gi|150400170|ref|YP_001323937.1| - 0.036 14.0 0.9 0.054 13.5 0.9 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-Mss51 PF13824.6 gi|150400170|ref|YP_001323937.1| - 0.038 14.1 2.1 4.5 7.4 0.2 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 OrfB_Zn_ribbon PF07282.11 gi|150400170|ref|YP_001323937.1| - 0.041 13.8 1.2 0.055 13.4 1.2 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.6 gi|150400170|ref|YP_001323937.1| - 0.097 12.4 6.4 0.18 11.6 0.3 2.5 2 0 0 2 2 2 0 zinc-ribbon domain VP_N-CPKC PF11475.8 gi|150400170|ref|YP_001323937.1| - 0.11 12.4 1.0 7.1 6.6 0.1 2.4 2 0 0 2 2 2 0 Virion protein N terminal domain zf-ribbon_3 PF13248.6 gi|150400170|ref|YP_001323937.1| - 0.13 11.7 5.6 0.13 11.7 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf_C2H2_10 PF18414.1 gi|150400170|ref|YP_001323937.1| - 0.28 10.7 4.0 2.6 7.6 0.8 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger DUF1936 PF09151.10 gi|150400170|ref|YP_001323937.1| - 0.41 10.6 0.4 0.41 10.6 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) Nitro_FeMo-Co PF02579.17 gi|150400171|ref|YP_001323938.1| - 7.4e-18 64.7 0.1 1e-17 64.2 0.1 1.2 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF3430 PF11912.8 gi|150400171|ref|YP_001323938.1| - 0.011 15.8 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3430) Nitro_FeMo-Co PF02579.17 gi|150400173|ref|YP_001323940.1| - 6.3e-14 52.1 0.0 7.9e-14 51.8 0.0 1.0 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor CBS PF00571.28 gi|150400174|ref|YP_001323941.1| - 2.1e-22 79.3 0.9 3.5e-11 43.4 0.1 2.3 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.22 gi|150400174|ref|YP_001323941.1| - 1.2e-16 60.7 5.1 1.3e-08 34.4 0.3 2.9 1 1 1 2 2 2 2 Peptidase family M50 Peptidase_M50B PF13398.6 gi|150400174|ref|YP_001323941.1| - 7.9e-06 25.6 12.7 2.4e-05 24.1 12.2 1.8 1 1 1 2 2 2 1 Peptidase M50B-like STN PF07660.14 gi|150400174|ref|YP_001323941.1| - 0.0085 15.9 0.1 4.1 7.3 0.0 3.0 3 0 0 3 3 3 2 Secretin and TonB N terminus short domain DUF3267 PF11667.8 gi|150400174|ref|YP_001323941.1| - 0.0089 16.3 0.2 0.0089 16.3 0.2 2.7 2 1 1 3 3 3 1 Putative zincin peptidase UPF0146 PF03686.13 gi|150400175|ref|YP_001323942.1| - 1.7e-35 121.7 0.0 2e-35 121.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) adh_short PF00106.25 gi|150400175|ref|YP_001323942.1| - 0.091 12.2 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 short chain dehydrogenase Lipoprotein_15 PF03640.15 gi|150400175|ref|YP_001323942.1| - 0.17 11.5 0.2 0.25 10.9 0.2 1.2 1 0 0 1 1 1 0 Secreted repeat of unknown function DJ-1_PfpI PF01965.24 gi|150400176|ref|YP_001323943.1| - 1.5e-40 138.7 0.1 1.7e-40 138.6 0.1 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family Catalase_C PF18011.1 gi|150400176|ref|YP_001323943.1| - 0.002 17.8 0.0 0.0025 17.4 0.0 1.2 1 0 0 1 1 1 1 C-terminal domain found in long catalases GATase PF00117.28 gi|150400176|ref|YP_001323943.1| - 0.044 13.6 0.0 0.048 13.4 0.0 1.2 1 0 0 1 1 1 0 Glutamine amidotransferase class-I Met_10 PF02475.16 gi|150400177|ref|YP_001323944.1| - 4.3e-64 215.9 0.1 5.5e-64 215.6 0.1 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_4 PF02390.17 gi|150400177|ref|YP_001323944.1| - 0.00064 19.2 0.0 0.0018 17.8 0.0 1.7 1 1 1 2 2 2 1 Putative methyltransferase tRNA_U5-meth_tr PF05958.11 gi|150400177|ref|YP_001323944.1| - 0.0028 16.7 0.1 0.0047 16.0 0.1 1.4 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_25 PF13649.6 gi|150400177|ref|YP_001323944.1| - 0.0053 17.4 0.0 0.017 15.8 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain GidB PF02527.15 gi|150400177|ref|YP_001323944.1| - 0.014 14.7 0.0 0.04 13.2 0.0 1.6 2 0 0 2 2 2 0 rRNA small subunit methyltransferase G MTS PF05175.14 gi|150400177|ref|YP_001323944.1| - 0.015 14.8 0.0 0.054 13.0 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase small domain RrnaAD PF00398.20 gi|150400177|ref|YP_001323944.1| - 0.022 13.8 0.1 0.04 13.0 0.0 1.4 2 0 0 2 2 2 0 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.6 gi|150400177|ref|YP_001323944.1| - 0.033 14.0 0.0 0.052 13.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DUF2124 PF09897.9 gi|150400178|ref|YP_001323945.1| - 2e-40 138.0 0.1 2.2e-40 137.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) DJ-1_PfpI PF01965.24 gi|150400178|ref|YP_001323945.1| - 0.033 14.0 0.0 0.054 13.3 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family ATP-grasp_3 PF02655.14 gi|150400179|ref|YP_001323946.1| - 2.4e-37 128.5 0.1 4.1e-37 127.7 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain preATP-grasp_3 PF18301.1 gi|150400179|ref|YP_001323946.1| - 7.3e-11 42.2 0.0 1.3e-10 41.4 0.0 1.4 1 0 0 1 1 1 1 pre ATP-grasp 3 domain ATPgrasp_Ter PF15632.6 gi|150400179|ref|YP_001323946.1| - 0.0027 17.5 0.0 0.0045 16.7 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon KH_2 PF07650.17 gi|150400180|ref|YP_001323947.1| - 0.0021 17.9 0.8 0.0073 16.1 0.8 1.9 1 1 0 1 1 1 1 KH domain MvaI_BcnI PF15515.6 gi|150400180|ref|YP_001323947.1| - 0.0038 17.1 3.3 0.0072 16.2 3.3 1.5 1 0 0 1 1 1 1 MvaI/BcnI restriction endonuclease family AMP-binding PF00501.28 gi|150400181|ref|YP_001323948.1| - 5.2e-113 377.8 0.0 6.3e-113 377.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|150400181|ref|YP_001323948.1| - 1.1e-16 61.6 0.2 2.8e-16 60.3 0.2 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain 4HBT_2 PF13279.6 gi|150400182|ref|YP_001323949.1| - 1.1e-07 32.3 0.0 1.3e-07 32.1 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.22 gi|150400182|ref|YP_001323949.1| - 1.3e-05 25.5 0.0 2.7e-05 24.4 0.0 1.7 2 1 0 2 2 2 1 Thioesterase superfamily Acyl-ACP_TE PF01643.17 gi|150400182|ref|YP_001323949.1| - 4.1e-05 23.0 0.2 0.053 12.8 0.0 2.1 1 1 1 2 2 2 2 Acyl-ACP thioesterase Cupin_2 PF07883.11 gi|150400183|ref|YP_001323950.1| - 4.9e-13 48.6 0.0 7.4e-13 48.0 0.0 1.2 1 0 0 1 1 1 1 Cupin domain HTH_31 PF13560.6 gi|150400183|ref|YP_001323950.1| - 4.1e-06 27.0 0.0 5.9e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|150400183|ref|YP_001323950.1| - 5.5e-06 26.3 0.1 8.3e-06 25.8 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|150400183|ref|YP_001323950.1| - 2e-05 24.5 0.0 4.6e-05 23.3 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|150400183|ref|YP_001323950.1| - 0.00032 21.1 0.1 0.00047 20.5 0.1 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Cupin_3 PF05899.12 gi|150400183|ref|YP_001323950.1| - 0.0035 17.0 0.1 0.006 16.2 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) HTH_25 PF13413.6 gi|150400183|ref|YP_001323950.1| - 0.0046 16.8 0.1 0.0079 16.0 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 gi|150400183|ref|YP_001323950.1| - 0.0072 16.2 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|150400183|ref|YP_001323950.1| - 0.03 14.2 0.0 0.047 13.6 0.0 1.3 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Radical_SAM PF04055.21 gi|150400184|ref|YP_001323951.1| - 2.3e-27 96.4 0.1 3.8e-27 95.7 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|150400184|ref|YP_001323951.1| - 9.1e-19 67.7 0.2 1.6e-18 66.9 0.2 1.4 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|150400184|ref|YP_001323951.1| - 1.4e-09 38.4 0.1 2.6e-09 37.4 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|150400184|ref|YP_001323951.1| - 1.4e-08 34.9 0.1 3.1e-08 33.8 0.1 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain FKBP26_C PF18046.1 gi|150400185|ref|YP_001323952.1| - 9e-20 70.5 2.5 1e-19 70.4 1.3 1.7 2 0 0 2 2 2 1 FKBP26_C-terminal FKBP_C PF00254.28 gi|150400185|ref|YP_001323952.1| - 5.4e-15 55.5 0.2 4.3e-14 52.6 0.2 2.2 1 1 1 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase NTP_transf_3 PF12804.7 gi|150400186|ref|YP_001323953.1| - 8.8e-26 91.2 0.0 1.1e-25 90.9 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glu-tRNAGln PF02686.15 gi|150400187|ref|YP_001323954.1| - 0.0049 17.1 1.2 0.0079 16.5 1.2 1.3 1 1 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Lipase_GDSL_3 PF14606.6 gi|150400187|ref|YP_001323954.1| - 0.013 15.7 0.2 0.015 15.5 0.2 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family DHDPS PF00701.22 gi|150400188|ref|YP_001323955.1| - 6.7e-94 313.8 0.1 7.5e-94 313.7 0.1 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family Ribosomal_S17e PF00833.18 gi|150400189|ref|YP_001323956.1| - 3.3e-18 65.8 1.5 3.5e-18 65.7 1.5 1.0 1 0 0 1 1 1 1 Ribosomal S17 Annexin PF00191.20 gi|150400189|ref|YP_001323956.1| - 0.034 14.2 0.1 0.11 12.6 0.0 1.7 2 0 0 2 2 2 0 Annexin SNF5 PF04855.12 gi|150400189|ref|YP_001323956.1| - 0.083 12.7 0.0 0.083 12.7 0.0 1.0 1 0 0 1 1 1 0 SNF5 / SMARCB1 / INI1 CM_2 PF01817.21 gi|150400190|ref|YP_001323957.1| - 2.5e-12 46.9 0.7 3.4e-12 46.5 0.7 1.2 1 0 0 1 1 1 1 Chorismate mutase type II HOOK PF05622.12 gi|150400190|ref|YP_001323957.1| - 0.0092 14.2 0.9 0.016 13.4 0.1 1.6 1 1 1 2 2 2 1 HOOK protein Thioredoxin_9 PF14595.6 gi|150400190|ref|YP_001323957.1| - 0.034 13.9 0.2 0.034 13.9 0.2 1.5 2 0 0 2 2 2 0 Thioredoxin DUF1319 PF07028.11 gi|150400190|ref|YP_001323957.1| - 0.17 12.1 1.8 0.35 11.1 0.2 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF1319) MAF_flag10 PF01973.18 gi|150400191|ref|YP_001323958.1| - 4.5e-41 140.4 0.8 6.2e-41 139.9 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF115 TPK_catalytic PF04263.16 gi|150400191|ref|YP_001323958.1| - 0.005 16.9 0.2 0.047 13.7 0.0 2.2 1 1 1 2 2 2 1 Thiamin pyrophosphokinase, catalytic domain Radical_SAM PF04055.21 gi|150400192|ref|YP_001323959.1| - 5.2e-22 79.0 0.4 8.1e-22 78.4 0.4 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|150400192|ref|YP_001323959.1| - 3.2e-11 43.6 0.7 6.5e-11 42.7 0.4 1.6 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|150400192|ref|YP_001323959.1| - 4.6e-08 33.2 0.3 4.6e-08 33.2 0.3 2.0 2 1 0 2 2 2 1 4Fe-4S single cluster domain DUF3795 PF12675.7 gi|150400192|ref|YP_001323959.1| - 0.031 14.7 0.8 0.066 13.6 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3795) MgtE PF01769.16 gi|150400193|ref|YP_001323960.1| - 9.6e-29 100.3 8.2 9.6e-29 100.3 8.2 1.8 1 1 0 1 1 1 1 Divalent cation transporter MgtE_N PF03448.17 gi|150400193|ref|YP_001323960.1| - 1.8e-22 79.8 6.1 1.8e-22 79.8 6.1 2.5 2 1 1 3 3 3 1 MgtE intracellular N domain CBS PF00571.28 gi|150400193|ref|YP_001323960.1| - 1.4e-13 51.0 2.6 7.4e-06 26.3 0.0 2.7 2 0 0 2 2 2 2 CBS domain FliG_N PF14842.6 gi|150400193|ref|YP_001323960.1| - 0.013 16.1 2.9 2.6 8.7 0.6 2.9 2 1 0 2 2 2 0 FliG N-terminal domain FliG_M PF14841.6 gi|150400193|ref|YP_001323960.1| - 0.065 13.5 0.5 5.5 7.3 0.1 2.9 2 0 0 2 2 2 0 FliG middle domain U3_assoc_6 PF08640.11 gi|150400193|ref|YP_001323960.1| - 0.13 12.4 0.1 0.34 11.0 0.1 1.7 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 6 ASXH PF13919.6 gi|150400193|ref|YP_001323960.1| - 0.23 11.5 0.1 3.3 7.7 0.1 2.4 1 1 0 1 1 1 0 Asx homology domain DUF4083 PF13314.6 gi|150400193|ref|YP_001323960.1| - 1.4 9.0 9.8 0.098 12.6 1.7 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4083) Lactamase_B_2 PF12706.7 gi|150400194|ref|YP_001323961.1| - 8.3e-07 28.7 0.0 1.5e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|150400194|ref|YP_001323961.1| - 3e-05 24.1 0.0 4.7e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|150400194|ref|YP_001323961.1| - 0.00057 19.4 0.0 0.0015 18.0 0.0 1.7 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|150400194|ref|YP_001323961.1| - 0.0083 16.0 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain tRNA-synt_1 PF00133.22 gi|150400195|ref|YP_001323962.1| - 2.1e-146 488.7 5.5 2.8e-145 484.9 5.5 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|150400195|ref|YP_001323962.1| - 3.9e-30 104.8 3.6 4.4e-30 104.7 1.9 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|150400195|ref|YP_001323962.1| - 1.8e-27 96.1 0.8 8.6e-16 57.7 0.0 3.4 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|150400195|ref|YP_001323962.1| - 8.7e-06 25.3 0.0 0.14 11.5 0.1 2.7 2 1 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|150400195|ref|YP_001323962.1| - 0.011 15.3 0.0 0.071 12.6 0.1 2.2 1 1 1 2 2 2 0 Leucyl-tRNA synthetase, Domain 2 RPN5_C PF18098.1 gi|150400195|ref|YP_001323962.1| - 0.014 15.5 1.6 0.09 12.9 0.3 2.7 2 0 0 2 2 2 0 26S proteasome regulatory subunit RPN5 C-terminal domain VWD PF00094.25 gi|150400195|ref|YP_001323962.1| - 0.029 14.6 0.1 0.18 12.1 0.0 2.4 2 0 0 2 2 2 0 von Willebrand factor type D domain DUF4550 PF15084.6 gi|150400195|ref|YP_001323962.1| - 0.12 12.8 0.9 0.48 10.9 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4550) Desulfoferrod_N PF06397.12 gi|150400195|ref|YP_001323962.1| - 0.15 11.7 0.1 0.49 10.0 0.1 1.9 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain Usp PF00582.26 gi|150400196|ref|YP_001323963.1| - 2.3e-34 118.9 0.0 2.6e-34 118.8 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family AP_endonuc_2 PF01261.24 gi|150400196|ref|YP_001323963.1| - 0.05 13.0 0.1 0.079 12.4 0.1 1.4 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel HhH-GPD PF00730.25 gi|150400197|ref|YP_001323964.1| - 3.7e-15 56.3 0.0 6.9e-15 55.4 0.0 1.4 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|150400197|ref|YP_001323964.1| - 4.8e-05 23.0 0.0 0.00012 21.7 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|150400197|ref|YP_001323964.1| - 0.013 16.0 0.0 0.029 15.0 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|150400197|ref|YP_001323964.1| - 0.073 13.2 0.0 0.56 10.4 0.0 2.1 2 0 0 2 2 2 0 Helix-hairpin-helix motif TP_methylase PF00590.20 gi|150400198|ref|YP_001323965.1| - 2.4e-17 63.6 0.0 2.9e-17 63.3 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases sCache_like PF16736.5 gi|150400198|ref|YP_001323965.1| - 0.006 16.7 1.1 0.012 15.7 0.1 1.8 2 0 0 2 2 2 1 Single Cache-like Rimk_N PF18030.1 gi|150400198|ref|YP_001323965.1| - 0.017 15.5 0.1 2.6 8.5 0.0 2.6 2 1 1 3 3 3 0 RimK PreATP-grasp domain Radical_SAM PF04055.21 gi|150400199|ref|YP_001323966.1| - 1e-12 48.8 0.1 1.5e-11 44.9 0.1 2.4 2 1 0 2 2 2 1 Radical SAM superfamily Glycos_transf_2 PF00535.26 gi|150400200|ref|YP_001323967.1| - 3.9e-24 85.4 0.1 6.1e-24 84.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|150400200|ref|YP_001323967.1| - 1.8e-05 24.8 0.0 1.9e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|150400200|ref|YP_001323967.1| - 0.028 14.9 0.1 0.35 11.4 0.0 2.2 1 1 1 2 2 2 0 Glycosyl transferase family 2 CbiA PF01656.23 gi|150400203|ref|YP_001323970.1| - 1.1e-26 93.4 0.2 1.9e-26 92.6 0.2 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|150400203|ref|YP_001323970.1| - 1.1e-25 90.6 3.4 5.4e-25 88.3 3.4 2.1 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|150400203|ref|YP_001323970.1| - 3.1e-22 79.3 0.3 4.6e-22 78.8 0.3 1.2 1 0 0 1 1 1 1 AAA domain Fer4_NifH PF00142.18 gi|150400203|ref|YP_001323970.1| - 8.3e-12 45.1 3.3 4.6e-06 26.3 0.3 2.0 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|150400203|ref|YP_001323970.1| - 1.4e-11 44.4 0.0 1.9e-11 43.9 0.0 1.4 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|150400203|ref|YP_001323970.1| - 3.3e-11 43.0 0.2 1.6e-10 40.8 0.2 1.9 1 1 0 1 1 1 1 ATPase MipZ AAA_26 PF13500.6 gi|150400203|ref|YP_001323970.1| - 2.6e-08 33.9 7.7 2.3e-07 30.9 1.6 2.5 2 1 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|150400203|ref|YP_001323970.1| - 2e-07 30.5 5.5 7e-06 25.4 0.7 2.2 2 0 0 2 2 2 2 Anion-transporting ATPase SRP54 PF00448.22 gi|150400203|ref|YP_001323970.1| - 0.00016 21.4 3.6 0.00069 19.3 0.6 2.6 2 1 1 3 3 3 1 SRP54-type protein, GTPase domain CLP1_P PF16575.5 gi|150400203|ref|YP_001323970.1| - 0.00055 19.8 0.5 0.014 15.2 0.1 2.1 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop VirC1 PF07015.11 gi|150400203|ref|YP_001323970.1| - 0.005 16.2 0.7 0.0085 15.4 0.7 1.3 1 0 0 1 1 1 1 VirC1 protein PhoH PF02562.16 gi|150400203|ref|YP_001323970.1| - 0.011 15.2 0.7 2.5 7.5 1.1 2.3 2 0 0 2 2 2 0 PhoH-like protein AAA_24 PF13479.6 gi|150400203|ref|YP_001323970.1| - 0.017 14.9 0.0 0.024 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|150400203|ref|YP_001323970.1| - 0.024 14.4 1.2 0.041 13.6 1.2 1.6 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|150400203|ref|YP_001323970.1| - 0.031 14.7 0.2 0.1 13.1 0.2 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ResIII PF04851.15 gi|150400203|ref|YP_001323970.1| - 0.041 13.9 0.0 2.2 8.2 0.1 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_25 PF13481.6 gi|150400203|ref|YP_001323970.1| - 0.061 12.9 0.0 0.09 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|150400203|ref|YP_001323970.1| - 0.065 13.0 0.3 0.27 11.0 0.3 1.9 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein DUF853 PF05872.12 gi|150400203|ref|YP_001323970.1| - 0.099 11.2 0.8 0.15 10.6 0.8 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) AAA_16 PF13191.6 gi|150400203|ref|YP_001323970.1| - 0.12 12.8 0.2 9.7 6.5 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 gi|150400203|ref|YP_001323970.1| - 0.16 12.5 0.1 0.39 11.3 0.1 1.7 1 1 0 1 1 1 0 AAA domain CitMHS PF03600.16 gi|150400205|ref|YP_001323972.1| - 5.3e-37 127.6 45.7 7.8e-32 110.7 27.6 2.1 1 1 1 2 2 2 2 Citrate transporter OHA PF14418.6 gi|150400205|ref|YP_001323972.1| - 0.14 12.0 0.0 0.58 10.0 0.0 2.0 2 0 0 2 2 2 0 OST-HTH Associated domain SepSecS PF05889.13 gi|150400206|ref|YP_001323973.1| - 2.2e-144 480.9 0.1 2.6e-144 480.7 0.1 1.0 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Beta_elim_lyase PF01212.21 gi|150400206|ref|YP_001323973.1| - 1.3e-07 31.2 0.0 1.9e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Pyridoxal_deC PF00282.19 gi|150400206|ref|YP_001323973.1| - 0.0029 16.4 0.0 0.0055 15.5 0.0 1.5 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain FAM91_N PF14647.6 gi|150400206|ref|YP_001323973.1| - 0.13 11.5 0.1 0.48 9.7 0.0 1.8 2 0 0 2 2 2 0 FAM91 N-terminus Nop PF01798.18 gi|150400207|ref|YP_001323974.1| - 6.3e-67 225.4 0.1 8.4e-67 225.0 0.1 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin DUF2884 PF11101.8 gi|150400207|ref|YP_001323974.1| - 0.13 11.7 0.5 0.25 10.8 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2884) Fibrillarin PF01269.17 gi|150400208|ref|YP_001323975.1| - 5.6e-98 326.6 0.0 6.4e-98 326.4 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin PhosphMutase PF10143.9 gi|150400209|ref|YP_001323976.1| - 4.7e-21 75.4 0.0 6.9e-21 74.9 0.0 1.2 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase CbiJ PF02571.14 gi|150400210|ref|YP_001323977.1| - 3.2e-59 200.3 0.0 3.6e-59 200.1 0.0 1.0 1 0 0 1 1 1 1 Precorrin-6x reductase CbiJ/CobK Glycos_transf_N PF04413.16 gi|150400210|ref|YP_001323977.1| - 0.17 11.5 0.0 0.28 10.8 0.0 1.3 1 0 0 1 1 1 0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Class_IIIsignal PF04021.12 gi|150400211|ref|YP_001323978.1| - 8.3e-07 28.8 3.9 2.1e-06 27.5 3.9 1.7 1 0 0 1 1 1 1 Class III signal peptide Class_IIIsignal PF04021.12 gi|150400212|ref|YP_001323979.1| - 6.7e-05 22.7 1.3 0.00011 22.1 1.3 1.3 1 0 0 1 1 1 1 Class III signal peptide Mak16 PF04874.14 gi|150400212|ref|YP_001323979.1| - 0.013 16.1 4.4 0.013 16.1 4.4 1.9 2 0 0 2 2 2 0 Mak16 protein C-terminal region LsmAD PF06741.13 gi|150400212|ref|YP_001323979.1| - 0.36 11.4 0.2 0.36 11.4 0.2 2.8 2 0 0 2 2 2 0 LsmAD domain OMPdecase PF00215.24 gi|150400213|ref|YP_001323980.1| - 5.2e-40 137.4 0.5 5.9e-40 137.2 0.5 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Hydrolase_6 PF13344.6 gi|150400213|ref|YP_001323980.1| - 0.037 14.1 0.1 0.078 13.1 0.1 1.6 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase eIF-1a PF01176.19 gi|150400214|ref|YP_001323981.1| - 1.5e-20 72.8 1.3 2e-20 72.3 1.3 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DUF2007 PF09413.10 gi|150400214|ref|YP_001323981.1| - 0.033 14.3 0.0 0.05 13.8 0.0 1.3 1 1 0 1 1 1 0 Putative prokaryotic signal transducing protein RIO1 PF01163.22 gi|150400215|ref|YP_001323982.1| - 5.2e-56 189.2 0.3 5.2e-56 189.2 0.3 1.6 2 0 0 2 2 2 1 RIO1 family APH PF01636.23 gi|150400215|ref|YP_001323982.1| - 0.0025 17.8 0.0 0.0039 17.1 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 gi|150400215|ref|YP_001323982.1| - 0.003 17.0 0.1 0.0063 15.9 0.1 1.6 1 1 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 gi|150400215|ref|YP_001323982.1| - 0.0042 15.9 0.2 0.0078 15.0 0.1 1.4 1 1 0 1 1 1 1 Fungal protein kinase Ins_P5_2-kin PF06090.12 gi|150400215|ref|YP_001323982.1| - 0.046 13.2 0.0 0.059 12.8 0.0 1.2 1 0 0 1 1 1 0 Inositol-pentakisphosphate 2-kinase Choline_kinase PF01633.20 gi|150400215|ref|YP_001323982.1| - 0.067 12.8 2.2 0.44 10.1 2.2 2.4 1 1 0 1 1 1 0 Choline/ethanolamine kinase Fructosamin_kin PF03881.14 gi|150400215|ref|YP_001323982.1| - 0.068 12.4 0.0 2.4 7.3 0.0 2.3 1 1 1 2 2 2 0 Fructosamine kinase KH_1 PF00013.29 gi|150400216|ref|YP_001323983.1| - 9.5e-16 57.4 1.8 1e-06 28.5 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_8 PF17903.1 gi|150400216|ref|YP_001323983.1| - 1.6e-05 24.9 0.0 5e-05 23.3 0.0 1.7 2 0 0 2 2 2 1 Krr1 KH1 domain KH_2 PF07650.17 gi|150400216|ref|YP_001323983.1| - 0.0026 17.6 5.1 0.024 14.5 0.7 2.3 2 0 0 2 2 2 2 KH domain Peptidase_M16_C PF05193.21 gi|150400216|ref|YP_001323983.1| - 0.06 13.3 0.0 0.081 12.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase M16 inactive domain KH_4 PF13083.6 gi|150400216|ref|YP_001323983.1| - 0.16 11.9 0.7 7 6.6 0.1 2.9 2 1 1 3 3 3 0 KH domain Ribosomal_L6 PF00347.23 gi|150400216|ref|YP_001323983.1| - 0.24 12.1 1.4 0.84 10.4 0.2 2.2 2 0 0 2 2 2 0 Ribosomal protein L6 FtsJ PF01728.19 gi|150400217|ref|YP_001323984.1| - 5.5e-54 182.9 0.0 7.3e-54 182.6 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 gi|150400217|ref|YP_001323984.1| - 4.6e-08 33.0 0.1 3.5e-07 30.1 0.1 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|150400217|ref|YP_001323984.1| - 2.9e-05 24.0 0.0 7.4e-05 22.6 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain TrkA_N PF02254.18 gi|150400217|ref|YP_001323984.1| - 0.022 15.0 0.0 0.046 14.0 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain Methyltransf_25 PF13649.6 gi|150400217|ref|YP_001323984.1| - 0.024 15.4 0.2 0.11 13.2 0.2 2.2 1 1 0 1 1 1 0 Methyltransferase domain NRD1_2 PF01995.16 gi|150400218|ref|YP_001323985.1| - 1.3e-119 397.8 9.8 1.3e-59 201.4 2.3 2.2 2 0 0 2 2 2 2 NrpR regulatory domains NRD1 and 2 HTH_12 PF08461.10 gi|150400218|ref|YP_001323985.1| - 4.2e-29 100.3 1.2 9.1e-29 99.2 1.2 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain RuvB_C PF05491.13 gi|150400218|ref|YP_001323985.1| - 0.019 14.8 0.9 0.2 11.5 0.6 2.9 2 1 0 2 2 2 0 RuvB C-terminal winged helix domain BcrAD_BadFG PF01869.20 gi|150400219|ref|YP_001323986.1| - 9e-62 209.0 6.8 1.2e-61 208.6 6.8 1.2 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.6 gi|150400219|ref|YP_001323986.1| - 0.0031 17.9 0.1 0.034 14.6 0.1 2.4 1 1 0 1 1 1 1 Cell division protein FtsA Peptidase_M22 PF00814.25 gi|150400219|ref|YP_001323986.1| - 0.033 13.9 0.0 8.4 6.0 0.0 2.6 3 0 0 3 3 3 0 Glycoprotease family DUF190 PF02641.15 gi|150400219|ref|YP_001323986.1| - 0.035 14.4 0.1 0.12 12.8 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized ACR, COG1993 Hydant_A_N PF05378.13 gi|150400219|ref|YP_001323986.1| - 0.67 9.6 4.5 0.2 11.3 0.5 2.1 3 0 0 3 3 3 0 Hydantoinase/oxoprolinase N-terminal region PTH2 PF01981.16 gi|150400220|ref|YP_001323987.1| - 2.4e-41 140.7 0.1 2.6e-41 140.6 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 TGT PF01702.18 gi|150400221|ref|YP_001323988.1| - 1.4e-83 281.0 0.0 1.8e-83 280.6 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase TGT_C2 PF14810.6 gi|150400221|ref|YP_001323988.1| - 5.1e-17 61.8 0.0 1.5e-16 60.3 0.0 1.8 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|150400221|ref|YP_001323988.1| - 2.2e-13 50.0 0.0 7.8e-13 48.2 0.0 2.0 1 0 0 1 1 1 1 PUA domain DUF5591 PF17884.1 gi|150400221|ref|YP_001323988.1| - 1.1e-05 25.3 0.0 3.1e-05 23.9 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) TGT_C1 PF14809.6 gi|150400221|ref|YP_001323988.1| - 0.011 16.0 0.0 1.1 9.6 0.0 2.5 1 1 0 2 2 2 0 C1 domain of tRNA-guanine transglycosylase dimerisation FRG1 PF06229.12 gi|150400221|ref|YP_001323988.1| - 0.057 13.1 0.9 3.9 7.2 0.1 2.7 3 0 0 3 3 3 0 FRG1-like domain Lactamase_B PF00753.27 gi|150400222|ref|YP_001323989.1| - 9.7e-09 35.5 0.2 3.3e-08 33.8 0.1 1.8 1 1 1 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|150400222|ref|YP_001323989.1| - 0.084 12.4 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF1189 PF06691.11 gi|150400222|ref|YP_001323989.1| - 0.36 10.4 7.4 0.35 10.4 6.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1189) LigT_PEase PF02834.16 gi|150400223|ref|YP_001323990.1| - 1.5e-26 92.4 0.0 6.4e-13 48.7 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase AKAP7_NLS PF10469.9 gi|150400223|ref|YP_001323990.1| - 2.4e-08 34.1 1.3 2.2e-07 31.0 1.3 1.9 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain 2_5_RNA_ligase2 PF13563.6 gi|150400223|ref|YP_001323990.1| - 4.2e-07 30.0 0.0 5.3e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily PhoU PF01895.19 gi|150400223|ref|YP_001323990.1| - 0.14 12.6 0.1 4.1 7.9 0.0 2.2 2 0 0 2 2 2 0 PhoU domain SPASM PF13186.6 gi|150400223|ref|YP_001323990.1| - 0.16 12.5 0.5 11 6.6 0.5 2.5 1 1 0 1 1 1 0 Iron-sulfur cluster-binding domain zinc_ribbon_4 PF13717.6 gi|150400224|ref|YP_001323991.1| - 0.001 19.0 1.6 0.062 13.2 0.5 2.1 2 0 0 2 2 2 1 zinc-ribbon domain FYVE PF01363.21 gi|150400224|ref|YP_001323991.1| - 0.0011 19.0 0.1 0.0012 18.9 0.1 1.1 1 0 0 1 1 1 1 FYVE zinc finger zf-C2H2_4 PF13894.6 gi|150400224|ref|YP_001323991.1| - 0.0015 19.2 0.6 1 10.4 0.1 2.1 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 gi|150400224|ref|YP_001323991.1| - 0.0027 18.0 2.4 0.61 10.6 0.4 2.1 2 0 0 2 2 2 2 Zinc-finger double domain zinc-ribbons_6 PF07191.12 gi|150400224|ref|YP_001323991.1| - 0.0034 17.3 0.4 0.0041 17.1 0.4 1.1 1 0 0 1 1 1 1 zinc-ribbons Prok-RING_1 PF14446.6 gi|150400224|ref|YP_001323991.1| - 0.0077 16.1 3.4 0.94 9.5 0.1 2.0 1 1 0 2 2 2 2 Prokaryotic RING finger family 1 Rad50_zn_hook PF04423.14 gi|150400224|ref|YP_001323991.1| - 0.01 15.7 0.0 0.019 14.8 0.0 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif TF_Zn_Ribbon PF08271.12 gi|150400224|ref|YP_001323991.1| - 0.013 15.0 2.5 0.58 9.7 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding Elf1 PF05129.13 gi|150400224|ref|YP_001323991.1| - 0.014 15.4 2.0 0.13 12.3 2.0 2.0 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zf-AN1 PF01428.16 gi|150400224|ref|YP_001323991.1| - 0.026 14.7 1.1 5.9 7.1 0.1 2.1 2 0 0 2 2 2 0 AN1-like Zinc finger Zf_RING PF16744.5 gi|150400224|ref|YP_001323991.1| - 0.026 14.6 0.4 0.032 14.4 0.4 1.3 1 0 0 1 1 1 0 KIAA1045 RING finger Zn-ribbon_8 PF09723.10 gi|150400224|ref|YP_001323991.1| - 0.069 13.3 1.5 0.22 11.7 1.5 1.7 1 1 1 2 2 2 0 Zinc ribbon domain Zn_ribbon_recom PF13408.6 gi|150400224|ref|YP_001323991.1| - 0.073 13.6 2.4 1.2 9.7 0.2 2.0 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain VATC PF18716.1 gi|150400224|ref|YP_001323991.1| - 0.084 12.7 1.1 2.5 8.0 0.0 2.1 1 1 1 2 2 2 0 Vms1-associating treble clef domain Zn-C2H2_12 PF18112.1 gi|150400224|ref|YP_001323991.1| - 0.086 13.3 1.2 0.98 9.9 0.1 2.1 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain zf-C2H2 PF00096.26 gi|150400224|ref|YP_001323991.1| - 0.12 12.9 2.3 6 7.5 0.2 2.1 2 0 0 2 2 2 0 Zinc finger, C2H2 type Trm112p PF03966.16 gi|150400224|ref|YP_001323991.1| - 0.13 12.9 2.1 1.9 9.2 2.1 2.0 1 1 0 1 1 1 0 Trm112p-like protein COPI_C PF06957.11 gi|150400224|ref|YP_001323991.1| - 0.13 10.9 0.1 0.14 10.9 0.1 1.0 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus A2L_zn_ribbon PF08792.10 gi|150400224|ref|YP_001323991.1| - 0.18 11.5 4.5 2.1 8.2 0.9 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-BED PF02892.15 gi|150400224|ref|YP_001323991.1| - 0.57 10.2 6.2 0.51 10.4 1.9 2.0 1 1 1 2 2 2 0 BED zinc finger AAL_decarboxy PF03306.13 gi|150400225|ref|YP_001323992.1| - 8.5e-84 280.3 0.0 1e-83 280.0 0.0 1.0 1 0 0 1 1 1 1 Alpha-acetolactate decarboxylase COMM_domain PF07258.14 gi|150400225|ref|YP_001323992.1| - 0.0027 17.8 0.0 0.2 11.8 0.0 2.4 2 0 0 2 2 2 1 COMM domain FMN_red PF03358.15 gi|150400226|ref|YP_001323993.1| - 5e-28 97.8 0.0 6.4e-28 97.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|150400226|ref|YP_001323993.1| - 6.9e-08 32.4 0.0 8.2e-08 32.2 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Exog_C PF18026.1 gi|150400226|ref|YP_001323993.1| - 0.2 11.8 0.6 0.38 10.8 0.1 1.7 2 0 0 2 2 2 0 Endo/exonuclease (EXOG) C-terminal domain TruD PF01142.18 gi|150400227|ref|YP_001323994.1| - 1.3e-112 376.7 2.0 7.4e-90 301.7 0.1 2.0 1 1 1 2 2 2 2 tRNA pseudouridine synthase D (TruD) DUF1743 PF08489.11 gi|150400228|ref|YP_001323995.1| - 5.8e-33 113.4 0.0 1.3e-32 112.3 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.25 gi|150400228|ref|YP_001323995.1| - 5.2e-08 32.8 0.2 1.2e-07 31.6 0.2 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 gi|150400228|ref|YP_001323995.1| - 0.074 12.7 0.5 0.35 10.5 0.0 2.2 2 0 0 2 2 2 0 Cell division control protein 24, OB domain 3 tRNA_anti_2 PF13742.6 gi|150400228|ref|YP_001323995.1| - 0.14 12.4 0.0 0.3 11.3 0.0 1.5 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain RMI2 PF16100.5 gi|150400228|ref|YP_001323995.1| - 0.16 11.8 0.0 0.31 10.8 0.0 1.4 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 Rad51 PF08423.11 gi|150400229|ref|YP_001323996.1| - 5.5e-23 81.5 0.3 6.4e-23 81.3 0.3 1.1 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|150400229|ref|YP_001323996.1| - 9.5e-10 38.4 0.1 1.1e-09 38.1 0.1 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein ATPase PF06745.13 gi|150400229|ref|YP_001323996.1| - 1.6e-09 37.5 5.3 3.2e-09 36.5 5.3 1.5 1 1 0 1 1 1 1 KaiC AAA_24 PF13479.6 gi|150400229|ref|YP_001323996.1| - 7.5e-06 25.8 0.1 1.6e-05 24.7 0.1 1.6 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|150400229|ref|YP_001323996.1| - 4.1e-05 23.3 0.0 6e-05 22.7 0.0 1.4 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|150400229|ref|YP_001323996.1| - 7.1e-05 22.8 0.6 9e-05 22.5 0.6 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea Zot PF05707.12 gi|150400229|ref|YP_001323996.1| - 0.0002 21.1 0.1 0.00027 20.7 0.1 1.3 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) IstB_IS21 PF01695.17 gi|150400229|ref|YP_001323996.1| - 0.00035 20.3 0.1 0.00079 19.2 0.1 1.7 1 1 0 1 1 1 1 IstB-like ATP binding protein CbiA PF01656.23 gi|150400229|ref|YP_001323996.1| - 0.002 18.1 0.0 0.0026 17.8 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|150400229|ref|YP_001323996.1| - 0.012 15.5 0.5 0.016 15.1 0.5 1.2 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 gi|150400229|ref|YP_001323996.1| - 0.019 14.7 0.0 0.021 14.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|150400229|ref|YP_001323996.1| - 0.022 15.2 0.8 0.048 14.1 0.8 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 gi|150400229|ref|YP_001323996.1| - 0.03 14.1 0.3 0.051 13.4 0.3 1.4 1 1 0 1 1 1 0 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|150400229|ref|YP_001323996.1| - 0.039 14.2 0.2 0.076 13.3 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|150400229|ref|YP_001323996.1| - 0.042 14.4 0.1 0.15 12.6 0.1 2.0 1 1 1 2 2 2 0 AAA domain PhoH PF02562.16 gi|150400229|ref|YP_001323996.1| - 0.058 12.8 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein ABC_tran PF00005.27 gi|150400229|ref|YP_001323996.1| - 0.07 13.6 0.5 0.1 13.1 0.5 1.4 1 1 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 gi|150400229|ref|YP_001323996.1| - 0.16 12.4 0.0 0.21 12.0 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Nit_Regul_Hom PF10126.9 gi|150400230|ref|YP_001323997.1| - 2.2e-45 153.1 0.4 2.4e-45 152.9 0.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein, homolog of nitrogen regulatory protein PII DUF134 PF02001.16 gi|150400231|ref|YP_001323998.1| - 1e-32 112.6 0.0 1.2e-32 112.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF134 HTH_23 PF13384.6 gi|150400231|ref|YP_001323998.1| - 0.00094 18.9 0.0 0.0016 18.1 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|150400231|ref|YP_001323998.1| - 0.014 14.9 0.0 0.021 14.3 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_29 PF13551.6 gi|150400231|ref|YP_001323998.1| - 0.015 15.3 0.2 0.039 14.0 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn helix HTH_10 PF04967.12 gi|150400231|ref|YP_001323998.1| - 0.022 14.5 0.0 0.047 13.5 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain Sigma70_r4_2 PF08281.12 gi|150400231|ref|YP_001323998.1| - 0.038 13.7 0.0 0.059 13.1 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 ABC_tran PF00005.27 gi|150400232|ref|YP_001323999.1| - 3e-50 170.3 0.0 5.3e-24 85.3 0.0 2.9 3 0 0 3 3 3 2 ABC transporter SMC_N PF02463.19 gi|150400232|ref|YP_001323999.1| - 2e-07 30.7 2.8 0.025 14.0 0.3 3.6 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|150400232|ref|YP_001323999.1| - 5.7e-06 26.3 2.8 0.033 14.1 0.1 2.6 3 0 0 3 3 2 2 RsgA GTPase AAA_21 PF13304.6 gi|150400232|ref|YP_001323999.1| - 1.3e-05 25.2 0.8 0.061 13.1 0.0 3.4 3 1 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|150400232|ref|YP_001323999.1| - 0.00012 21.8 0.9 0.26 11.0 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain NB-ARC PF00931.22 gi|150400232|ref|YP_001323999.1| - 0.00017 20.8 1.3 0.053 12.7 0.0 3.2 3 1 0 3 3 3 2 NB-ARC domain AAA_30 PF13604.6 gi|150400232|ref|YP_001323999.1| - 0.0027 17.5 0.3 0.48 10.1 0.1 2.6 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|150400232|ref|YP_001323999.1| - 0.0027 17.0 0.0 2 7.6 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin AAA_22 PF13401.6 gi|150400232|ref|YP_001323999.1| - 0.0034 17.6 0.6 3.9 7.7 0.0 2.7 2 1 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.23 gi|150400232|ref|YP_001323999.1| - 0.0052 16.8 1.2 1.2 9.3 0.0 3.5 3 1 0 3 3 3 1 50S ribosome-binding GTPase AAA_18 PF13238.6 gi|150400232|ref|YP_001323999.1| - 0.0082 16.7 0.1 0.53 10.8 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|150400232|ref|YP_001323999.1| - 0.016 15.4 0.2 0.72 10.0 0.0 2.7 3 0 0 3 3 2 0 AAA domain SbcCD_C PF13558.6 gi|150400232|ref|YP_001323999.1| - 0.035 14.4 0.0 4.9 7.5 0.0 3.0 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit IstB_IS21 PF01695.17 gi|150400232|ref|YP_001323999.1| - 0.041 13.6 0.2 8.7 6.0 0.0 3.2 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_23 PF13476.6 gi|150400232|ref|YP_001323999.1| - 0.044 14.3 3.8 2 8.9 0.4 2.9 1 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|150400232|ref|YP_001323999.1| - 0.044 14.2 0.2 5.6 7.3 0.0 2.6 2 0 0 2 2 2 0 AAA ATPase domain MobB PF03205.14 gi|150400232|ref|YP_001323999.1| - 0.069 13.1 1.2 1.8 8.4 0.2 2.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B PRK PF00485.18 gi|150400232|ref|YP_001323999.1| - 0.071 12.8 0.0 6.8 6.4 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Mg_chelatase PF01078.21 gi|150400232|ref|YP_001323999.1| - 0.12 11.7 0.0 1.1 8.6 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI TsaE PF02367.17 gi|150400232|ref|YP_001323999.1| - 0.13 12.3 0.4 1.9 8.5 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PduV-EutP PF10662.9 gi|150400232|ref|YP_001323999.1| - 0.13 12.0 0.6 6 6.6 0.0 3.3 4 0 0 4 4 4 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 gi|150400232|ref|YP_001323999.1| - 0.57 10.1 1.7 32 4.4 0.2 2.7 3 0 0 3 3 3 0 NACHT domain DUF87 PF01935.17 gi|150400232|ref|YP_001323999.1| - 0.8 9.8 3.7 15 5.6 0.0 2.8 2 1 0 2 2 2 0 Helicase HerA, central domain cobW PF02492.19 gi|150400232|ref|YP_001323999.1| - 2 8.0 5.3 17 5.0 0.3 3.6 4 0 0 4 4 4 0 CobW/HypB/UreG, nucleotide-binding domain AAA PF00004.29 gi|150400232|ref|YP_001323999.1| - 6.1 7.3 6.4 3.7 8.0 0.3 3.3 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) AP_endonuc_2 PF01261.24 gi|150400233|ref|YP_001324000.1| - 1.3e-15 57.4 0.0 1.6e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel JmjN PF02375.17 gi|150400233|ref|YP_001324000.1| - 0.0019 18.1 0.1 0.021 14.8 0.1 2.6 2 0 0 2 2 2 1 jmjN domain Glyoxalase_4 PF13669.6 gi|150400233|ref|YP_001324000.1| - 0.2 11.9 0.0 0.6 10.4 0.0 1.7 2 0 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ADP_ribosyl_GH PF03747.14 gi|150400234|ref|YP_001324001.1| - 8.7e-60 202.9 0.0 1e-59 202.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase IDEAL PF08858.10 gi|150400234|ref|YP_001324001.1| - 0.15 11.9 0.7 0.39 10.5 0.7 1.7 1 0 0 1 1 1 0 IDEAL domain AIM24 PF01987.17 gi|150400235|ref|YP_001324002.1| - 3.9e-57 193.3 0.8 4.4e-57 193.1 0.8 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Scm3 PF10384.9 gi|150400235|ref|YP_001324002.1| - 0.019 14.7 0.1 0.036 13.8 0.1 1.4 1 0 0 1 1 1 0 Centromere protein Scm3 Putative_PNPOx PF01243.20 gi|150400236|ref|YP_001324003.1| - 2.4e-14 53.3 0.0 3.1e-14 52.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.12 gi|150400236|ref|YP_001324003.1| - 0.00019 21.3 0.0 0.00021 21.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF447) KOW PF00467.29 gi|150400237|ref|YP_001324004.1| - 0.0028 17.6 3.0 0.003 17.5 0.8 1.9 2 0 0 2 2 2 1 KOW motif Ribosomal_L14e PF01929.17 gi|150400237|ref|YP_001324004.1| - 0.0065 16.9 0.0 0.0086 16.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L14 YolD PF08863.10 gi|150400237|ref|YP_001324004.1| - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 YolD-like protein Cytidylate_kin2 PF13189.6 gi|150400238|ref|YP_001324005.1| - 1.7e-22 80.4 0.1 3.9e-14 53.2 0.1 2.0 1 1 1 2 2 2 2 Cytidylate kinase-like family AAA_18 PF13238.6 gi|150400238|ref|YP_001324005.1| - 3.1e-16 60.1 0.1 4.1e-16 59.7 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|150400238|ref|YP_001324005.1| - 1.3e-12 48.3 0.0 2.2e-12 47.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|150400238|ref|YP_001324005.1| - 2.5e-08 33.9 0.2 0.00019 21.2 0.0 2.1 1 1 1 2 2 2 2 Cytidylate kinase ADK PF00406.22 gi|150400238|ref|YP_001324005.1| - 9e-06 25.9 0.1 3.9e-05 23.8 0.1 2.0 1 1 0 1 1 1 1 Adenylate kinase Thymidylate_kin PF02223.17 gi|150400238|ref|YP_001324005.1| - 0.0018 18.0 0.2 0.049 13.3 0.0 2.1 2 0 0 2 2 2 1 Thymidylate kinase AAA_33 PF13671.6 gi|150400238|ref|YP_001324005.1| - 0.016 15.3 0.0 1.6 8.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|150400238|ref|YP_001324005.1| - 0.05 13.8 0.1 0.098 12.9 0.0 1.5 2 0 0 2 2 2 0 AAA domain dNK PF01712.19 gi|150400238|ref|YP_001324005.1| - 0.058 13.2 3.1 2.5 7.9 0.4 2.6 1 1 1 2 2 2 0 Deoxynucleoside kinase SKI PF01202.22 gi|150400238|ref|YP_001324005.1| - 0.064 13.4 1.7 0.98 9.5 1.7 2.2 1 1 0 1 1 1 0 Shikimate kinase Ribosomal_L34e PF01199.18 gi|150400239|ref|YP_001324006.1| - 2.9e-26 91.6 5.0 3.4e-26 91.4 5.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L34e DZR PF12773.7 gi|150400239|ref|YP_001324006.1| - 0.011 15.8 0.2 0.016 15.3 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_12 PF11331.8 gi|150400239|ref|YP_001324006.1| - 0.059 13.2 1.6 0.18 11.6 0.3 2.1 2 0 0 2 2 2 0 Probable zinc-ribbon domain Fer2_3 PF13085.6 gi|150400239|ref|YP_001324006.1| - 0.075 13.0 0.1 0.082 12.9 0.1 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain zf-C4_Topoisom PF01396.19 gi|150400239|ref|YP_001324006.1| - 1.8 8.4 6.7 1.1 9.1 0.3 2.8 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger TOBE PF03459.17 gi|150400240|ref|YP_001324007.1| - 3.5e-18 65.6 0.3 3.8e-18 65.5 0.3 1.0 1 0 0 1 1 1 1 TOBE domain MazE_antitoxin PF04014.18 gi|150400240|ref|YP_001324007.1| - 0.069 13.1 0.7 1.6 8.8 0.1 2.3 1 1 1 2 2 2 0 Antidote-toxin recognition MazE, bacterial antitoxin TOBE_2 PF08402.10 gi|150400240|ref|YP_001324007.1| - 0.07 13.3 0.1 0.077 13.2 0.1 1.2 1 0 0 1 1 1 0 TOBE domain ALS_ss_C PF10369.9 gi|150400240|ref|YP_001324007.1| - 0.08 13.2 0.4 0.15 12.3 0.1 1.6 2 0 0 2 2 2 0 Small subunit of acetolactate synthase TrmB PF01978.19 gi|150400241|ref|YP_001324008.1| - 8.2e-06 25.6 1.0 1.6e-05 24.7 0.2 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|150400241|ref|YP_001324008.1| - 0.00077 19.0 0.0 0.0024 17.4 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding DUF1495 PF07381.11 gi|150400241|ref|YP_001324008.1| - 0.0027 17.5 0.0 0.0053 16.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_5 PF01022.20 gi|150400241|ref|YP_001324008.1| - 0.0065 16.3 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Acetyltransf_1 PF00583.25 gi|150400242|ref|YP_001324009.1| - 7.1e-08 32.7 0.0 1e-07 32.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|150400242|ref|YP_001324009.1| - 8.2e-08 32.6 0.0 1.3e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|150400242|ref|YP_001324009.1| - 3.9e-07 30.2 0.0 5.1e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|150400242|ref|YP_001324009.1| - 7.6e-05 22.7 0.0 0.00014 21.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain MOZ_SAS PF01853.18 gi|150400242|ref|YP_001324009.1| - 0.018 14.7 0.3 0.057 13.1 0.2 1.8 1 1 1 2 2 2 0 MOZ/SAS family NHase_alpha PF02979.16 gi|150400243|ref|YP_001324010.1| - 0.02 14.2 0.2 0.022 14.1 0.2 1.0 1 0 0 1 1 1 0 Nitrile hydratase, alpha chain Plasmod_dom_1 PF09715.10 gi|150400243|ref|YP_001324010.1| - 0.093 12.8 1.0 0.56 10.3 0.1 2.0 2 0 0 2 2 2 0 Plasmodium protein of unknown function (Plasmod_dom_1) TIM PF00121.18 gi|150400244|ref|YP_001324011.1| - 6.4e-12 45.4 0.1 1.9e-11 43.8 0.1 1.7 1 1 1 2 2 2 1 Triosephosphate isomerase ThiG PF05690.14 gi|150400244|ref|YP_001324011.1| - 0.00013 21.4 0.2 0.00025 20.4 0.2 1.5 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG IGPS PF00218.21 gi|150400244|ref|YP_001324011.1| - 0.0089 15.2 0.4 0.015 14.5 0.1 1.5 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase FMN_dh PF01070.18 gi|150400244|ref|YP_001324011.1| - 0.013 14.5 0.1 0.023 13.8 0.1 1.3 1 0 0 1 1 1 0 FMN-dependent dehydrogenase DeoC PF01791.9 gi|150400245|ref|YP_001324012.1| - 4.6e-66 222.8 0.0 5.5e-66 222.6 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase MTS PF05175.14 gi|150400246|ref|YP_001324013.1| - 1.1e-10 41.3 0.0 2e-10 40.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|150400246|ref|YP_001324013.1| - 4.5e-10 39.4 0.0 6.2e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|150400246|ref|YP_001324013.1| - 6.3e-10 39.0 0.1 8.3e-10 38.7 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|150400246|ref|YP_001324013.1| - 6e-08 33.3 0.0 1.2e-07 32.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|150400246|ref|YP_001324013.1| - 7.7e-06 25.7 0.0 2.7e-05 23.9 0.0 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Cons_hypoth95 PF03602.15 gi|150400246|ref|YP_001324013.1| - 8.2e-06 25.6 0.0 1.1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 gi|150400246|ref|YP_001324013.1| - 9.3e-06 25.6 0.0 1.2e-05 25.2 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|150400246|ref|YP_001324013.1| - 1.4e-05 25.7 0.0 2.5e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|150400246|ref|YP_001324013.1| - 0.00095 19.2 0.0 0.0013 18.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|150400246|ref|YP_001324013.1| - 0.0015 19.2 0.1 0.0025 18.5 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|150400246|ref|YP_001324013.1| - 0.003 17.1 0.1 0.0039 16.8 0.1 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TehB PF03848.14 gi|150400246|ref|YP_001324013.1| - 0.01 15.3 0.0 0.018 14.5 0.0 1.4 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_4 PF02390.17 gi|150400246|ref|YP_001324013.1| - 0.014 14.9 0.0 0.024 14.1 0.0 1.6 1 1 0 1 1 1 0 Putative methyltransferase DOT1 PF08123.13 gi|150400246|ref|YP_001324013.1| - 0.034 13.7 0.5 0.047 13.2 0.5 1.3 1 1 0 1 1 1 0 Histone methylation protein DOT1 HSP20 PF00011.21 gi|150400247|ref|YP_001324014.1| - 7e-10 39.0 0.1 8.5e-10 38.7 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|150400247|ref|YP_001324014.1| - 5.4e-08 32.3 0.0 8.3e-08 31.7 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA SRP54 PF00448.22 gi|150400248|ref|YP_001324015.1| - 1.3e-72 243.6 3.0 1.3e-72 243.6 3.0 1.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|150400248|ref|YP_001324015.1| - 3.4e-11 43.2 7.0 3.4e-11 43.2 7.0 3.1 3 2 0 3 3 2 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.6 gi|150400248|ref|YP_001324015.1| - 5.1e-05 23.1 1.2 8.5e-05 22.4 1.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|150400248|ref|YP_001324015.1| - 7.4e-05 23.2 13.0 0.00069 20.1 0.3 2.7 2 1 1 3 3 3 2 AAA domain AAA_33 PF13671.6 gi|150400248|ref|YP_001324015.1| - 0.00022 21.4 0.0 0.00047 20.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|150400248|ref|YP_001324015.1| - 0.00025 20.4 0.4 0.0009 18.6 0.2 2.0 1 1 1 2 2 2 1 Zeta toxin APS_kinase PF01583.20 gi|150400248|ref|YP_001324015.1| - 0.00038 20.4 0.0 0.0019 18.1 0.0 2.0 2 0 0 2 2 2 1 Adenylylsulphate kinase Thymidylate_kin PF02223.17 gi|150400248|ref|YP_001324015.1| - 0.0043 16.8 6.8 0.055 13.2 0.5 3.7 2 2 1 3 3 3 1 Thymidylate kinase MeaB PF03308.16 gi|150400248|ref|YP_001324015.1| - 0.0069 15.4 5.5 0.017 14.1 5.4 1.6 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_22 PF13401.6 gi|150400248|ref|YP_001324015.1| - 0.047 14.0 0.8 0.13 12.5 0.0 2.1 3 0 0 3 3 3 0 AAA domain AAA_16 PF13191.6 gi|150400248|ref|YP_001324015.1| - 0.061 13.7 0.0 0.14 12.5 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain B12-binding PF02310.19 gi|150400248|ref|YP_001324015.1| - 0.084 12.9 0.9 6.1 6.9 0.1 2.6 2 1 0 2 2 2 0 B12 binding domain MobB PF03205.14 gi|150400248|ref|YP_001324015.1| - 0.15 11.9 6.4 0.52 10.2 3.4 2.8 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_28 PF13521.6 gi|150400248|ref|YP_001324015.1| - 0.17 12.1 0.1 0.34 11.1 0.1 1.5 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 gi|150400248|ref|YP_001324015.1| - 0.25 11.4 7.7 0.45 10.6 1.0 3.3 2 2 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain PTPlike_phytase PF14566.6 gi|150400248|ref|YP_001324015.1| - 1.9 8.6 5.3 9.5 6.3 5.3 2.1 1 1 0 1 1 1 0 Inositol hexakisphosphate MMR_HSR1 PF01926.23 gi|150400248|ref|YP_001324015.1| - 3.2 7.9 6.9 0.67 10.1 1.5 2.6 2 2 0 2 2 2 0 50S ribosome-binding GTPase ECF_trnsprt PF12822.7 gi|150400249|ref|YP_001324016.1| - 1.9e-06 28.1 29.3 2.2e-05 24.7 29.7 2.0 1 1 0 1 1 1 1 ECF transporter, substrate-specific component CPBP PF02517.16 gi|150400249|ref|YP_001324016.1| - 0.88 10.0 11.7 0.43 11.0 6.1 2.6 2 1 0 2 2 2 0 CPBP intramembrane metalloprotease Xan_ur_permease PF00860.20 gi|150400250|ref|YP_001324017.1| - 8.1e-97 324.4 45.5 9.9e-97 324.1 45.5 1.1 1 0 0 1 1 1 1 Permease family UPRTase PF14681.6 gi|150400251|ref|YP_001324018.1| - 2.3e-50 170.9 0.0 2.7e-50 170.7 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|150400251|ref|YP_001324018.1| - 1.9e-11 43.8 0.5 2.6e-11 43.3 0.5 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|150400251|ref|YP_001324018.1| - 0.00013 21.5 0.0 0.00025 20.6 0.0 1.4 1 1 0 1 1 1 1 Phosphoribosyl transferase Na_H_antiporter PF03553.14 gi|150400252|ref|YP_001324019.1| - 2.2e-65 220.9 28.4 2.2e-65 220.9 28.4 2.2 2 0 0 2 2 2 2 Na+/H+ antiporter family RAMP4 PF06624.12 gi|150400252|ref|YP_001324019.1| - 0.23 11.5 0.6 4.8 7.3 0.0 2.9 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 HTH_3 PF01381.22 gi|150400253|ref|YP_001324020.1| - 1.8e-14 53.5 0.3 8.3e-14 51.4 0.2 2.3 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|150400253|ref|YP_001324020.1| - 4.2e-09 36.3 0.4 1.7e-08 34.4 0.3 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|150400253|ref|YP_001324020.1| - 2.3e-06 27.8 0.0 4.6e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.23 gi|150400253|ref|YP_001324020.1| - 0.0031 17.2 0.0 0.0064 16.2 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein HTH_11 PF08279.12 gi|150400253|ref|YP_001324020.1| - 0.089 12.7 2.8 0.095 12.7 0.0 2.5 3 0 0 3 3 3 0 HTH domain HTH_25 PF13413.6 gi|150400253|ref|YP_001324020.1| - 0.097 12.5 0.5 0.23 11.4 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_17 PF12728.7 gi|150400253|ref|YP_001324020.1| - 0.1 12.8 0.0 0.42 10.8 0.0 2.1 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1053 PF06327.14 gi|150400253|ref|YP_001324020.1| - 0.25 11.9 2.1 0.28 11.7 0.6 1.9 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) DUF2124 PF09897.9 gi|150400254|ref|YP_001324021.1| - 9.5e-44 148.7 0.1 1.1e-43 148.5 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) DUF2178 PF09946.9 gi|150400255|ref|YP_001324022.1| - 3e-22 78.8 9.7 3.6e-22 78.5 9.7 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) DUF2070 PF09843.9 gi|150400255|ref|YP_001324022.1| - 0.00018 20.0 9.5 0.00021 19.7 9.5 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) Holin_SPP1 PF04688.13 gi|150400255|ref|YP_001324022.1| - 0.86 9.8 5.3 0.66 10.2 0.6 2.3 2 0 0 2 2 2 0 SPP1 phage holin Dpy19 PF10034.9 gi|150400255|ref|YP_001324022.1| - 1 7.4 9.5 0.11 10.7 4.3 1.7 1 1 1 2 2 2 0 Q-cell neuroblast polarisation HTH_3 PF01381.22 gi|150400256|ref|YP_001324023.1| - 3.3e-16 59.1 0.1 3.7e-16 58.9 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|150400256|ref|YP_001324023.1| - 3.1e-09 36.7 0.6 3.7e-09 36.5 0.6 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|150400256|ref|YP_001324023.1| - 2.4e-06 27.8 0.0 2.7e-06 27.6 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|150400256|ref|YP_001324023.1| - 1.7e-05 25.2 0.0 1.9e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_11 PF08279.12 gi|150400256|ref|YP_001324023.1| - 0.00019 21.3 0.3 0.00039 20.3 0.2 1.6 2 0 0 2 2 2 1 HTH domain HTH_23 PF13384.6 gi|150400256|ref|YP_001324023.1| - 0.00061 19.5 0.1 0.0011 18.8 0.1 1.4 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|150400256|ref|YP_001324023.1| - 0.0015 18.0 0.2 0.0056 16.2 0.1 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_25 PF13413.6 gi|150400256|ref|YP_001324023.1| - 0.002 17.9 0.2 0.0028 17.5 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Troponin PF00992.20 gi|150400256|ref|YP_001324023.1| - 0.037 14.3 0.1 0.038 14.3 0.1 1.0 1 0 0 1 1 1 0 Troponin HTH_Crp_2 PF13545.6 gi|150400256|ref|YP_001324023.1| - 0.047 13.7 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|150400256|ref|YP_001324023.1| - 0.096 12.6 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT TPR_1 PF00515.28 gi|150400257|ref|YP_001324024.1| - 2.2e-63 207.7 38.7 3.5e-11 42.4 0.2 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|150400257|ref|YP_001324024.1| - 4.5e-60 195.0 25.0 1.2e-09 37.5 0.1 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_8 PF13181.6 gi|150400257|ref|YP_001324024.1| - 8.2e-46 150.4 34.7 3.7e-09 36.1 0.2 10.8 10 1 0 10 10 10 8 Tetratricopeptide repeat TPR_11 PF13414.6 gi|150400257|ref|YP_001324024.1| - 1.5e-40 136.6 25.3 4.4e-09 35.9 1.1 8.9 4 2 5 9 9 9 7 TPR repeat TPR_17 PF13431.6 gi|150400257|ref|YP_001324024.1| - 3.5e-34 114.7 30.4 4.2e-05 23.6 0.0 10.0 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|150400257|ref|YP_001324024.1| - 5.8e-31 106.6 10.6 2.3e-07 31.0 0.0 8.3 4 3 4 8 8 8 8 Tetratricopeptide repeat TPR_7 PF13176.6 gi|150400257|ref|YP_001324024.1| - 4.5e-27 92.1 5.6 4.4e-06 26.3 0.1 9.7 10 0 0 10 10 10 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|150400257|ref|YP_001324024.1| - 6.1e-21 73.3 0.0 0.0045 17.7 0.0 8.2 3 3 6 9 9 9 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|150400257|ref|YP_001324024.1| - 1.7e-19 70.2 0.0 3.1e-05 24.5 0.0 5.6 4 2 2 6 6 6 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|150400257|ref|YP_001324024.1| - 3.6e-19 69.0 0.6 0.00066 20.1 0.0 5.3 4 2 1 5 5 5 4 Tetratricopeptide repeat TPR_6 PF13174.6 gi|150400257|ref|YP_001324024.1| - 4.8e-15 55.1 12.0 0.13 12.9 0.1 8.3 10 0 0 10 10 8 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|150400257|ref|YP_001324024.1| - 1.8e-12 47.3 20.7 0.00055 20.1 0.3 4.6 2 1 2 4 4 4 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 gi|150400257|ref|YP_001324024.1| - 6.4e-11 41.8 11.1 0.0087 15.9 0.0 7.1 8 0 0 8 8 7 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|150400257|ref|YP_001324024.1| - 2.1e-09 37.4 0.0 0.064 13.4 0.0 6.2 4 2 2 6 6 6 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|150400257|ref|YP_001324024.1| - 1.4e-06 27.6 4.8 0.046 12.6 0.0 4.1 2 2 1 4 4 4 1 NMDA receptor-regulated protein 1 Sel1 PF08238.12 gi|150400257|ref|YP_001324024.1| - 2.6e-05 24.7 14.0 0.68 10.7 0.1 7.8 9 0 0 9 9 7 1 Sel1 repeat TPR_15 PF13429.6 gi|150400257|ref|YP_001324024.1| - 2.7e-05 23.5 0.2 0.0077 15.5 0.0 3.3 3 2 0 3 3 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|150400257|ref|YP_001324024.1| - 0.00026 21.0 12.2 0.53 10.4 0.2 5.2 4 0 0 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat DUF627 PF04781.12 gi|150400257|ref|YP_001324024.1| - 0.00039 20.4 3.0 0.43 10.6 0.2 3.7 4 1 0 4 4 3 1 Protein of unknown function (DUF627) ChAPs PF09295.10 gi|150400257|ref|YP_001324024.1| - 0.0025 16.9 4.1 7.2 5.5 0.0 4.6 1 1 3 6 6 6 0 ChAPs (Chs5p-Arf1p-binding proteins) Alkyl_sulf_dimr PF14863.6 gi|150400257|ref|YP_001324024.1| - 0.0028 18.1 0.1 3.6 8.1 0.0 3.3 3 0 0 3 3 3 1 Alkyl sulfatase dimerisation PPR PF01535.20 gi|150400257|ref|YP_001324024.1| - 0.0029 17.8 19.5 1.8 9.0 0.1 7.0 7 0 0 7 7 7 1 PPR repeat DUF5113 PF17140.4 gi|150400257|ref|YP_001324024.1| - 0.0035 17.2 0.6 0.0035 17.2 0.6 5.8 4 3 4 8 8 8 1 Domain of unknown function (DUF5113) DUF3856 PF12968.7 gi|150400257|ref|YP_001324024.1| - 0.0073 16.4 2.7 41 4.2 0.0 4.7 3 2 1 4 4 4 0 Domain of Unknown Function (DUF3856) RPN7 PF10602.9 gi|150400257|ref|YP_001324024.1| - 0.013 15.3 11.5 1.2 8.8 0.0 5.1 2 2 2 5 5 5 0 26S proteasome subunit RPN7 TPR_20 PF14561.6 gi|150400257|ref|YP_001324024.1| - 0.067 13.5 0.2 49 4.3 0.1 4.1 3 1 1 4 4 4 0 Tetratricopeptide repeat MIT PF04212.18 gi|150400257|ref|YP_001324024.1| - 0.15 12.1 24.1 5.7 7.1 0.1 7.4 8 1 1 9 9 8 0 MIT (microtubule interacting and transport) domain FAT PF02259.23 gi|150400257|ref|YP_001324024.1| - 0.99 8.6 8.5 85 2.2 5.9 3.6 1 1 2 3 3 3 0 FAT domain NRBF2_MIT PF17169.4 gi|150400257|ref|YP_001324024.1| - 1.6 9.0 3.7 62 3.9 0.0 4.1 5 0 0 5 5 3 0 MIT domain of nuclear receptor-binding factor 2 HEPN PF05168.14 gi|150400257|ref|YP_001324024.1| - 2.1 8.5 7.3 1.3 9.2 0.3 3.5 4 0 0 4 4 3 0 HEPN domain DUF4810 PF16068.5 gi|150400257|ref|YP_001324024.1| - 2.4 8.7 7.1 9 6.9 0.0 4.4 5 1 0 5 5 4 0 Domain of unknown function (DUF4810) SHNi-TPR PF10516.9 gi|150400257|ref|YP_001324024.1| - 4.3 6.9 5.6 21 4.7 0.2 3.7 4 0 0 4 4 4 0 SHNi-TPR TPR_3 PF07720.12 gi|150400257|ref|YP_001324024.1| - 6.3 6.9 20.0 2.1 8.4 0.1 5.6 7 0 0 7 7 5 0 Tetratricopeptide repeat DUF357 PF04010.13 gi|150400257|ref|YP_001324024.1| - 7.1 6.8 16.3 1.6 8.9 0.3 4.7 3 2 3 6 6 5 0 Protein of unknown function (DUF357) ApbA_C PF08546.11 gi|150400258|ref|YP_001324025.1| - 1.4e-31 109.3 0.0 2.1e-31 108.7 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.16 gi|150400258|ref|YP_001324025.1| - 1.5e-25 89.6 0.2 2.1e-25 89.1 0.2 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|150400258|ref|YP_001324025.1| - 0.022 15.3 0.9 0.077 13.6 0.9 1.9 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DAO PF01266.24 gi|150400258|ref|YP_001324025.1| - 0.035 13.7 0.1 0.051 13.1 0.1 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|150400258|ref|YP_001324025.1| - 0.058 13.6 0.1 0.13 12.5 0.1 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|150400258|ref|YP_001324025.1| - 0.06 12.6 0.1 0.089 12.0 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain Sacchrp_dh_NADP PF03435.18 gi|150400258|ref|YP_001324025.1| - 0.067 13.5 0.1 0.13 12.5 0.1 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF2196 PF09962.9 gi|150400259|ref|YP_001324026.1| - 7.3e-31 105.9 1.0 8e-31 105.8 1.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) EamA PF00892.20 gi|150400260|ref|YP_001324027.1| - 1.8e-30 105.9 33.9 1.1e-16 61.3 13.3 2.0 2 0 0 2 2 2 2 EamA-like transporter family 7TMR-DISM_7TM PF07695.11 gi|150400260|ref|YP_001324027.1| - 4.4 7.1 40.0 0.7 9.7 18.6 2.7 1 1 2 3 3 3 0 7TM diverse intracellular signalling Ribosomal_S3Ae PF01015.18 gi|150400261|ref|YP_001324028.1| - 3.3e-61 206.4 2.7 4.3e-61 206.0 2.7 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family Ribosomal_S27e PF01667.17 gi|150400262|ref|YP_001324029.1| - 0.1 12.3 0.2 0.1 12.3 0.2 1.7 2 0 0 2 2 2 0 Ribosomal protein S27 Ribosomal_S2 PF00318.20 gi|150400263|ref|YP_001324030.1| - 6e-25 87.7 0.0 6e-13 48.5 0.0 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 Phage_lysozyme PF00959.19 gi|150400263|ref|YP_001324030.1| - 0.11 12.9 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 Phage lysozyme Na_Pi_cotrans PF02690.15 gi|150400264|ref|YP_001324031.1| - 1.4e-67 226.1 36.3 7.4e-53 178.4 14.8 2.6 1 1 1 2 2 2 2 Na+/Pi-cotransporter PhoU PF01895.19 gi|150400264|ref|YP_001324031.1| - 2.3e-31 108.1 10.2 3.8e-17 62.5 0.4 2.5 2 0 0 2 2 2 2 PhoU domain IZUMO PF15005.6 gi|150400264|ref|YP_001324031.1| - 1.8 9.1 3.7 13 6.3 0.2 2.6 1 1 1 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated CarS-like PF01864.17 gi|150400264|ref|YP_001324031.1| - 3.2 7.7 19.7 0.49 10.4 4.1 2.8 3 0 0 3 3 3 0 CDP-archaeol synthase DUF3972 PF13118.6 gi|150400264|ref|YP_001324031.1| - 7.2 7.1 13.6 0.43 11.0 3.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3972) DUF2115 PF09888.9 gi|150400265|ref|YP_001324032.1| - 1.1e-41 143.0 3.5 1.3e-41 142.9 3.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2115) VIT1 PF01988.19 gi|150400266|ref|YP_001324033.1| - 1.9e-17 63.8 15.5 4.2e-13 49.7 1.9 2.0 1 1 1 2 2 2 2 VIT family zf-C2H2_aberr PF17017.5 gi|150400267|ref|YP_001324034.1| - 0.01 16.0 1.1 0.011 15.9 1.1 1.1 1 0 0 1 1 1 0 Aberrant zinc-finger PAPS_reduct PF01507.19 gi|150400268|ref|YP_001324035.1| - 1.8e-05 24.8 0.0 5e-05 23.4 0.0 1.9 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.17 gi|150400268|ref|YP_001324035.1| - 0.00013 21.1 0.0 0.0002 20.6 0.0 1.2 1 0 0 1 1 1 1 NAD synthase ATP_bind_3 PF01171.20 gi|150400268|ref|YP_001324035.1| - 0.0057 16.4 0.0 0.021 14.6 0.0 2.0 2 1 0 2 2 2 1 PP-loop family ThiI PF02568.14 gi|150400268|ref|YP_001324035.1| - 0.0071 15.9 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|150400268|ref|YP_001324035.1| - 0.031 13.8 0.0 0.061 12.8 0.0 1.6 1 1 0 1 1 1 0 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 gi|150400268|ref|YP_001324035.1| - 0.083 12.4 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 Diphthamide synthase zf-C3HC4_3 PF13920.6 gi|150400268|ref|YP_001324035.1| - 0.098 12.5 3.6 0.17 11.8 1.0 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF2318 PF10080.9 gi|150400268|ref|YP_001324035.1| - 0.12 12.5 2.3 0.58 10.3 0.4 2.6 3 0 0 3 3 3 0 Predicted membrane protein (DUF2318) zf-AD PF07776.15 gi|150400268|ref|YP_001324035.1| - 0.13 12.5 2.3 1.1 9.5 1.2 2.7 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) zf-CHY PF05495.12 gi|150400268|ref|YP_001324035.1| - 0.19 12.2 3.0 0.61 10.6 1.4 2.3 2 0 0 2 2 2 0 CHY zinc finger zf-Sec23_Sec24 PF04810.15 gi|150400268|ref|YP_001324035.1| - 1 9.4 4.5 11 6.1 0.1 3.2 2 1 1 3 3 3 0 Sec23/Sec24 zinc finger Ribosomal_S27e PF01667.17 gi|150400268|ref|YP_001324035.1| - 1.5 8.6 4.3 0.42 10.4 0.4 2.2 2 0 0 2 2 2 0 Ribosomal protein S27 Pribosyltran PF00156.27 gi|150400269|ref|YP_001324036.1| - 1.5e-13 50.5 0.1 4.5e-13 49.0 0.1 1.8 1 1 1 2 2 2 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|150400269|ref|YP_001324036.1| - 0.084 12.3 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Peptidase_U32 PF01136.19 gi|150400270|ref|YP_001324037.1| - 2.6e-77 259.1 0.0 4.9e-77 258.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family U32 Peptidase_U32_C PF16325.5 gi|150400270|ref|YP_001324037.1| - 0.00025 21.3 0.2 0.00064 20.0 0.2 1.6 1 0 0 1 1 1 1 Peptidase family U32 C-terminal domain GTP_EFTU_D2 PF03144.25 gi|150400270|ref|YP_001324037.1| - 0.00079 19.8 0.4 0.002 18.5 0.4 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.6 gi|150400270|ref|YP_001324037.1| - 0.064 13.2 0.4 0.21 11.5 0.4 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Radical_SAM PF04055.21 gi|150400271|ref|YP_001324038.1| - 9.3e-19 68.4 0.1 1.3e-18 67.9 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily DDE_Tnp_IS66_C PF13817.6 gi|150400271|ref|YP_001324038.1| - 0.13 12.5 0.0 0.3 11.3 0.0 1.6 1 0 0 1 1 1 0 IS66 C-terminal element ACT_6 PF13740.6 gi|150400272|ref|YP_001324039.1| - 3.3e-18 65.4 0.4 3.7e-18 65.3 0.4 1.0 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|150400272|ref|YP_001324039.1| - 6.2e-10 38.7 0.5 9.1e-10 38.1 0.5 1.3 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|150400272|ref|YP_001324039.1| - 8.2e-07 29.5 1.8 1.3e-05 25.7 0.6 2.0 1 1 1 2 2 2 2 ACT domain ACT_7 PF13840.6 gi|150400272|ref|YP_001324039.1| - 0.0016 18.2 0.2 0.003 17.3 0.2 1.5 1 0 0 1 1 1 1 ACT domain TRAPP PF04051.16 gi|150400272|ref|YP_001324039.1| - 0.073 12.8 0.2 8.9 6.0 0.0 2.1 1 1 1 2 2 2 0 Transport protein particle (TRAPP) component Img2 PF05046.14 gi|150400272|ref|YP_001324039.1| - 0.076 13.3 0.1 0.14 12.5 0.1 1.4 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) DUF2113 PF09886.9 gi|150400274|ref|YP_001324041.1| - 2e-51 174.0 7.0 2.3e-51 173.8 7.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) Ribosomal_S13 PF00416.22 gi|150400274|ref|YP_001324041.1| - 0.11 12.8 0.7 0.16 12.3 0.1 1.7 2 0 0 2 2 2 0 Ribosomal protein S13/S18 ThiS PF02597.20 gi|150400275|ref|YP_001324042.1| - 2.5e-06 28.1 0.1 2.7e-06 27.9 0.1 1.1 1 0 0 1 1 1 1 ThiS family IlvN PF07991.12 gi|150400276|ref|YP_001324043.1| - 7.3e-74 246.8 0.1 1e-73 246.4 0.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|150400276|ref|YP_001324043.1| - 6.4e-63 211.3 1.6 1e-62 210.7 1.6 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_binding_2 PF03446.15 gi|150400276|ref|YP_001324043.1| - 5.3e-06 26.7 0.0 1.4e-05 25.3 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|150400276|ref|YP_001324043.1| - 1.4e-05 24.5 0.0 2.6e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|150400276|ref|YP_001324043.1| - 0.00015 22.3 0.0 0.00037 21.0 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 gi|150400276|ref|YP_001324043.1| - 0.00029 21.0 0.0 0.00074 19.6 0.0 1.6 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 7TMR-HDED PF07697.11 gi|150400277|ref|YP_001324044.1| - 0.47 10.5 5.9 0.56 10.3 5.9 1.4 1 1 0 1 1 1 0 7TM-HD extracellular SBF PF01758.16 gi|150400278|ref|YP_001324045.1| - 6.6e-39 133.6 19.8 6.6e-39 133.6 19.8 2.2 1 1 1 2 2 2 1 Sodium Bile acid symporter family SBF_like PF13593.6 gi|150400278|ref|YP_001324045.1| - 1.1e-16 61.1 23.8 1.3e-16 60.9 23.8 1.1 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) Mem_trans PF03547.18 gi|150400278|ref|YP_001324045.1| - 0.00014 20.4 7.6 0.00014 20.4 7.6 2.5 1 1 1 2 2 2 1 Membrane transport protein ALS_ss_C PF10369.9 gi|150400279|ref|YP_001324046.1| - 3e-28 97.8 0.8 2.9e-27 94.7 0.1 2.1 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|150400279|ref|YP_001324046.1| - 3e-18 65.4 0.7 5.1e-18 64.7 0.3 1.6 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 gi|150400279|ref|YP_001324046.1| - 1e-14 53.9 0.1 2.1e-14 53.0 0.1 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|150400279|ref|YP_001324046.1| - 9.4e-05 22.9 0.6 0.0002 21.9 0.6 1.5 1 0 0 1 1 1 1 ACT domain Saccharop_dh_N PF04455.12 gi|150400279|ref|YP_001324046.1| - 0.0042 17.5 0.2 0.012 16.0 0.1 1.8 1 1 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region Acylphosphatase PF00708.18 gi|150400279|ref|YP_001324046.1| - 0.0051 17.2 0.4 2.2 8.7 0.2 2.2 2 0 0 2 2 2 2 Acylphosphatase NIL PF09383.10 gi|150400279|ref|YP_001324046.1| - 0.02 14.7 0.2 1.1 9.1 0.0 2.3 2 1 0 2 2 2 0 NIL domain SLS PF14611.6 gi|150400279|ref|YP_001324046.1| - 0.066 13.0 0.5 0.29 10.9 0.4 1.8 1 1 1 2 2 2 0 Mitochondrial inner-membrane-bound regulator Imm57 PF15596.6 gi|150400279|ref|YP_001324046.1| - 0.076 13.4 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 57 TPP_enzyme_N PF02776.18 gi|150400280|ref|YP_001324047.1| - 7.4e-62 208.0 0.1 5.2e-59 198.7 0.1 2.4 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|150400280|ref|YP_001324047.1| - 8.7e-51 171.3 0.1 1.8e-50 170.3 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|150400280|ref|YP_001324047.1| - 4e-50 169.6 0.2 1.7e-49 167.6 0.0 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO_dh PF02552.16 gi|150400280|ref|YP_001324047.1| - 0.0079 16.0 0.1 0.025 14.4 0.1 1.8 1 1 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Carbam_trans_C PF16861.5 gi|150400281|ref|YP_001324048.1| - 5.5e-55 185.5 0.0 9.7e-55 184.7 0.0 1.4 1 0 0 1 1 1 1 Carbamoyltransferase C-terminus Carbam_trans_N PF02543.15 gi|150400281|ref|YP_001324048.1| - 3.2e-39 135.5 0.1 6.7e-36 124.6 0.1 2.2 1 1 1 2 2 2 2 Carbamoyltransferase N-terminus Peptidase_M22 PF00814.25 gi|150400281|ref|YP_001324048.1| - 8.2e-07 29.0 0.0 1.3e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 Glycoprotease family Apis_Csd PF11671.8 gi|150400281|ref|YP_001324048.1| - 0.054 13.5 8.7 0.13 12.3 2.0 3.3 3 0 0 3 3 3 0 Complementary sex determiner protein Sua5_yciO_yrdC PF01300.18 gi|150400281|ref|YP_001324048.1| - 0.15 11.6 0.1 0.55 9.7 0.0 1.9 2 0 0 2 2 2 0 Telomere recombination RTC PF01137.21 gi|150400282|ref|YP_001324049.1| - 2.7e-72 242.6 0.0 3.1e-72 242.4 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|150400282|ref|YP_001324049.1| - 6.6e-12 45.9 0.0 1.3e-11 45.0 0.0 1.4 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain Archease PF01951.16 gi|150400283|ref|YP_001324050.1| - 8.5e-39 133.0 0.5 9.4e-39 132.8 0.5 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) Ldh_1_N PF00056.23 gi|150400285|ref|YP_001324052.1| - 1.2e-28 100.0 0.2 2.4e-28 99.0 0.2 1.5 2 0 0 2 2 2 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|150400285|ref|YP_001324052.1| - 5.4e-20 72.0 0.0 2.1e-19 70.1 0.0 1.8 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Semialdhyde_dh PF01118.24 gi|150400285|ref|YP_001324052.1| - 2.9e-05 24.5 0.0 4.6e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|150400285|ref|YP_001324052.1| - 0.0075 16.4 0.0 0.017 15.3 0.0 1.7 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Glyco_hydro_4C PF11975.8 gi|150400285|ref|YP_001324052.1| - 0.014 15.5 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase C-terminal domain Cation_efflux PF01545.21 gi|150400286|ref|YP_001324053.1| - 5.9e-50 169.8 7.9 7.7e-50 169.4 7.9 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|150400286|ref|YP_001324053.1| - 2.3e-21 75.7 4.7 4.9e-21 74.6 4.7 1.6 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF354 PF04007.12 gi|150400287|ref|YP_001324054.1| - 9.6e-125 416.1 2.7 1.1e-124 416.0 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) UCH_N PF16674.5 gi|150400288|ref|YP_001324055.1| - 0.083 12.8 0.3 0.29 11.1 0.1 2.0 2 0 0 2 2 2 0 N-terminal of ubiquitin carboxyl-terminal hydrolase 37 TRAM1 PF08390.11 gi|150400289|ref|YP_001324056.1| - 0.15 11.8 0.1 0.15 11.8 0.1 2.5 2 0 0 2 2 2 0 TRAM1-like protein DUF2627 PF11118.8 gi|150400289|ref|YP_001324056.1| - 0.76 10.4 7.5 0.7 10.5 3.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) Herpes_LMP1 PF05297.11 gi|150400289|ref|YP_001324056.1| - 2.4 7.3 10.1 3.1 6.9 10.1 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) UPF0182 PF03699.13 gi|150400289|ref|YP_001324056.1| - 6.5 4.7 8.4 7.8 4.5 8.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) Ribosomal_L7Ae PF01248.26 gi|150400290|ref|YP_001324057.1| - 2.4e-24 84.9 4.3 2.8e-24 84.6 4.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|150400290|ref|YP_001324057.1| - 0.0049 16.7 0.1 0.0081 16.0 0.1 1.4 1 0 0 1 1 1 1 PELOTA RNA binding domain eIF3_N PF09440.10 gi|150400290|ref|YP_001324057.1| - 0.07 13.6 0.4 0.11 12.9 0.4 1.3 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain Ribosomal_S28e PF01200.18 gi|150400291|ref|YP_001324058.1| - 3.7e-30 103.7 2.3 4.2e-30 103.5 2.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L24e PF01246.20 gi|150400292|ref|YP_001324059.1| - 1.3e-23 82.9 6.6 1.4e-23 82.8 6.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.14 gi|150400292|ref|YP_001324059.1| - 0.00013 21.8 8.5 0.00023 21.1 8.5 1.4 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif Ole-e-6 PF09253.10 gi|150400292|ref|YP_001324059.1| - 0.035 14.0 4.7 0.53 10.3 0.3 2.2 1 1 1 2 2 2 0 Pollen allergen ole e 6 YacG PF03884.14 gi|150400292|ref|YP_001324059.1| - 0.066 12.9 2.3 0.095 12.5 1.9 1.6 1 1 0 1 1 1 0 DNA gyrase inhibitor YacG YHS PF04945.13 gi|150400292|ref|YP_001324059.1| - 0.35 11.0 3.9 0.6 10.3 3.9 1.4 1 1 0 1 1 1 0 YHS domain DUF2116 PF09889.9 gi|150400292|ref|YP_001324059.1| - 1.6 8.8 5.6 0.56 10.2 1.8 2.1 1 1 1 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) ELFV_dehydrog PF00208.21 gi|150400293|ref|YP_001324060.1| - 1.7e-88 296.4 0.5 2.3e-88 296.0 0.5 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|150400293|ref|YP_001324060.1| - 1.4e-52 176.9 0.0 3.7e-52 175.6 0.0 1.7 2 0 0 2 2 2 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NAD_binding_7 PF13241.6 gi|150400293|ref|YP_001324060.1| - 0.0017 18.7 0.0 0.0036 17.7 0.0 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding Beta_propel PF09826.9 gi|150400296|ref|YP_001324063.1| - 2.5e-122 409.4 7.6 8.8e-122 407.6 7.6 1.8 1 1 0 1 1 1 1 Beta propeller domain Inhibitor_I42 PF09394.10 gi|150400296|ref|YP_001324063.1| - 7.7e-24 83.9 1.8 2.2e-23 82.5 1.2 2.2 2 0 0 2 2 2 1 Chagasin family peptidase inhibitor I42 ATP-synt_E_2 PF08112.11 gi|150400296|ref|YP_001324063.1| - 0.047 14.0 2.1 0.16 12.3 2.1 1.9 1 0 0 1 1 1 0 ATP synthase epsilon subunit Spectrin_like PF18373.1 gi|150400296|ref|YP_001324063.1| - 0.5 10.5 4.1 0.34 11.0 0.2 2.5 2 0 0 2 2 2 0 Spectrin like domain SHIRT PF18655.1 gi|150400296|ref|YP_001324063.1| - 0.51 11.0 4.2 2.5 8.7 0.1 3.4 3 1 1 4 4 4 0 SHIRT domain HTH_20 PF12840.7 gi|150400297|ref|YP_001324064.1| - 8.5e-10 38.6 0.0 1.2e-09 38.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|150400297|ref|YP_001324064.1| - 1.9e-09 37.3 1.0 3.6e-09 36.3 1.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|150400297|ref|YP_001324064.1| - 1.3e-06 28.2 0.3 3.5e-06 26.9 0.3 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.6 gi|150400297|ref|YP_001324064.1| - 1.7e-05 25.2 0.1 2.6e-05 24.6 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|150400297|ref|YP_001324064.1| - 2e-05 24.3 0.0 3.2e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|150400297|ref|YP_001324064.1| - 7.2e-05 22.3 0.1 0.00013 21.4 0.1 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|150400297|ref|YP_001324064.1| - 0.00015 21.6 0.0 0.00022 21.1 0.0 1.2 1 0 0 1 1 1 1 MarR family Penicillinase_R PF03965.16 gi|150400297|ref|YP_001324064.1| - 0.00016 22.0 0.1 0.00025 21.4 0.1 1.3 1 0 0 1 1 1 1 Penicillinase repressor TrmB PF01978.19 gi|150400297|ref|YP_001324064.1| - 0.00056 19.7 0.0 0.0011 18.8 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|150400297|ref|YP_001324064.1| - 0.00097 19.0 0.3 0.0022 17.9 0.1 1.8 2 0 0 2 2 1 1 HTH domain HTH_10 PF04967.12 gi|150400297|ref|YP_001324064.1| - 0.0011 18.7 0.1 0.0019 17.9 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain DUF4423 PF14394.6 gi|150400297|ref|YP_001324064.1| - 0.0037 17.0 0.0 0.0056 16.4 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) MarR PF01047.22 gi|150400297|ref|YP_001324064.1| - 0.008 16.1 0.1 0.014 15.3 0.1 1.4 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|150400297|ref|YP_001324064.1| - 0.0092 16.2 0.0 0.021 15.0 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain SpoIIID PF12116.8 gi|150400297|ref|YP_001324064.1| - 0.014 15.5 0.2 0.062 13.4 0.1 2.0 2 0 0 2 2 2 0 Stage III sporulation protein D HTH_17 PF12728.7 gi|150400297|ref|YP_001324064.1| - 0.014 15.6 0.0 0.033 14.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|150400297|ref|YP_001324064.1| - 0.024 14.1 0.0 0.041 13.4 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 TRIQK PF15168.6 gi|150400297|ref|YP_001324064.1| - 0.033 14.1 2.6 0.039 13.8 0.3 2.2 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family Mur_ligase_C PF02875.21 gi|150400297|ref|YP_001324064.1| - 0.065 13.5 0.0 0.14 12.5 0.0 1.5 1 1 0 1 1 1 0 Mur ligase family, glutamate ligase domain PadR PF03551.14 gi|150400297|ref|YP_001324064.1| - 0.076 13.0 0.1 0.13 12.2 0.1 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_40 PF14493.6 gi|150400297|ref|YP_001324064.1| - 0.095 13.2 0.0 0.16 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HxlR PF01638.17 gi|150400297|ref|YP_001324064.1| - 0.1 12.4 0.1 0.18 11.7 0.1 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_41 PF14502.6 gi|150400297|ref|YP_001324064.1| - 0.11 12.3 0.1 0.31 10.8 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain DNA_ligase_A_M PF01068.21 gi|150400297|ref|YP_001324064.1| - 0.11 12.1 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 ATP dependent DNA ligase domain HTH_AsnC-type PF13404.6 gi|150400297|ref|YP_001324064.1| - 0.14 12.0 0.0 0.91 9.4 0.0 2.0 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain RP-C PF03428.13 gi|150400297|ref|YP_001324064.1| - 0.14 11.8 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain DUF4500 PF14937.6 gi|150400298|ref|YP_001324065.1| - 0.0017 18.3 0.1 0.011 15.7 0.0 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4500) CARDB PF07705.11 gi|150400298|ref|YP_001324065.1| - 0.0056 16.9 2.5 0.51 10.6 0.2 3.3 3 1 0 3 3 3 1 CARDB TNFR_16_TM PF18422.1 gi|150400298|ref|YP_001324065.1| - 0.022 14.7 2.2 0.045 13.7 2.2 1.5 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain Arrestin_C PF02752.22 gi|150400298|ref|YP_001324065.1| - 0.024 15.1 0.1 0.051 14.0 0.1 1.7 1 1 0 1 1 1 0 Arrestin (or S-antigen), C-terminal domain Gram_pos_anchor PF00746.21 gi|150400298|ref|YP_001324065.1| - 0.032 14.2 0.0 0.061 13.3 0.0 1.5 1 0 0 1 1 1 0 LPXTG cell wall anchor motif HlyD_3 PF13437.6 gi|150400298|ref|YP_001324065.1| - 0.048 14.4 0.3 9.9 6.9 0.0 3.1 2 2 1 3 3 3 0 HlyD family secretion protein MarR_2 PF12802.7 gi|150400299|ref|YP_001324066.1| - 2.2e-06 27.4 0.0 3.4e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|150400299|ref|YP_001324066.1| - 0.00011 22.3 0.0 0.00021 21.4 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.10 gi|150400299|ref|YP_001324066.1| - 0.00013 21.7 0.0 0.00022 20.9 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|150400299|ref|YP_001324066.1| - 0.0037 17.7 0.0 0.007 16.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain FUR PF01475.19 gi|150400299|ref|YP_001324066.1| - 0.0045 17.1 0.0 0.0074 16.4 0.0 1.4 1 0 0 1 1 1 1 Ferric uptake regulator family MarR PF01047.22 gi|150400299|ref|YP_001324066.1| - 0.0058 16.5 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|150400299|ref|YP_001324066.1| - 0.0058 17.0 0.0 0.0091 16.3 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_17 PF12728.7 gi|150400299|ref|YP_001324066.1| - 0.014 15.5 0.0 0.028 14.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|150400299|ref|YP_001324066.1| - 0.018 14.9 0.0 0.038 13.9 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_24 PF13412.6 gi|150400299|ref|YP_001324066.1| - 0.021 14.4 0.1 0.05 13.2 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF4423 PF14394.6 gi|150400299|ref|YP_001324066.1| - 0.023 14.4 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_20 PF12840.7 gi|150400299|ref|YP_001324066.1| - 0.069 13.2 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_CI_repr PF07022.13 gi|150400299|ref|YP_001324066.1| - 0.077 13.1 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Patatin PF01734.22 gi|150400299|ref|YP_001324066.1| - 0.097 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Patatin-like phospholipase ABC_tran PF00005.27 gi|150400300|ref|YP_001324067.1| - 7.6e-33 113.9 0.0 1.3e-32 113.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|150400300|ref|YP_001324067.1| - 6.3e-10 38.9 1.3 2.3e-09 37.0 1.3 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|150400300|ref|YP_001324067.1| - 3.9e-07 30.2 0.0 0.0052 16.6 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|150400300|ref|YP_001324067.1| - 6.5e-05 22.8 1.0 0.22 11.2 0.4 2.2 1 1 1 2 2 2 2 AAA ATPase domain Rad17 PF03215.15 gi|150400300|ref|YP_001324067.1| - 0.0005 20.0 0.2 0.0022 18.0 0.1 2.0 1 1 0 2 2 2 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|150400300|ref|YP_001324067.1| - 0.00051 20.0 0.5 0.0012 18.7 0.1 1.9 3 0 0 3 3 2 1 RsgA GTPase AAA_29 PF13555.6 gi|150400300|ref|YP_001324067.1| - 0.00096 18.8 0.1 0.0025 17.5 0.0 1.7 1 1 0 1 1 1 1 P-loop containing region of AAA domain G-alpha PF00503.20 gi|150400300|ref|YP_001324067.1| - 0.0014 17.9 0.2 0.0017 17.6 0.2 1.3 1 0 0 1 1 1 1 G-protein alpha subunit AAA_10 PF12846.7 gi|150400300|ref|YP_001324067.1| - 0.0023 16.9 0.3 0.0041 16.1 0.3 1.4 1 1 0 1 1 1 1 AAA-like domain RNA_helicase PF00910.22 gi|150400300|ref|YP_001324067.1| - 0.0038 17.6 0.7 0.01 16.2 0.0 2.1 3 0 0 3 3 1 1 RNA helicase MMR_HSR1 PF01926.23 gi|150400300|ref|YP_001324067.1| - 0.0042 17.1 0.1 0.0093 16.0 0.1 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|150400300|ref|YP_001324067.1| - 0.0043 17.3 0.1 0.019 15.2 0.1 2.1 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|150400300|ref|YP_001324067.1| - 0.0048 16.9 0.7 0.011 15.6 0.3 2.0 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|150400300|ref|YP_001324067.1| - 0.0081 15.8 0.0 0.035 13.7 0.0 2.0 2 1 0 2 2 2 1 AAA domain Septin PF00735.18 gi|150400300|ref|YP_001324067.1| - 0.0098 15.2 0.0 0.021 14.1 0.0 1.5 1 0 0 1 1 1 1 Septin AAA_24 PF13479.6 gi|150400300|ref|YP_001324067.1| - 0.017 14.8 0.7 0.19 11.4 0.0 2.6 2 1 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 gi|150400300|ref|YP_001324067.1| - 0.019 14.9 1.9 1.3 8.9 0.3 2.5 2 0 0 2 2 2 0 NTPase AAA_16 PF13191.6 gi|150400300|ref|YP_001324067.1| - 0.027 14.8 0.0 0.048 14.0 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain T2SSE PF00437.20 gi|150400300|ref|YP_001324067.1| - 0.037 13.1 0.8 0.15 11.0 0.1 2.1 1 1 1 2 2 2 0 Type II/IV secretion system protein AAA_18 PF13238.6 gi|150400300|ref|YP_001324067.1| - 0.041 14.4 0.5 0.27 11.8 0.2 2.2 1 1 0 2 2 2 0 AAA domain AAA PF00004.29 gi|150400300|ref|YP_001324067.1| - 0.055 13.9 0.3 4.3 7.8 0.0 2.5 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 gi|150400300|ref|YP_001324067.1| - 0.067 13.4 0.0 0.61 10.4 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit IstB_IS21 PF01695.17 gi|150400300|ref|YP_001324067.1| - 0.083 12.6 0.1 0.52 10.0 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein NACHT PF05729.12 gi|150400300|ref|YP_001324067.1| - 0.13 12.1 0.2 1.2 9.1 0.1 2.4 3 0 0 3 3 3 0 NACHT domain Mg_chelatase PF01078.21 gi|150400300|ref|YP_001324067.1| - 0.13 11.6 0.5 7.8 5.8 0.2 2.5 2 1 1 3 3 3 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|150400300|ref|YP_001324067.1| - 0.17 12.1 0.3 0.25 11.5 0.3 1.7 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|150400300|ref|YP_001324067.1| - 0.3 11.6 4.5 1 9.8 4.5 2.2 1 1 0 1 1 1 0 AAA domain MacB_PCD PF12704.7 gi|150400301|ref|YP_001324068.1| - 1.2e-29 104.1 0.1 1.2e-29 104.1 0.1 1.9 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|150400301|ref|YP_001324068.1| - 5e-13 49.3 17.0 2.7e-12 47.0 5.7 3.2 3 0 0 3 3 3 2 FtsX-like permease family TMEM237 PF15383.6 gi|150400301|ref|YP_001324068.1| - 0.024 13.7 0.3 0.11 11.6 0.0 1.9 2 0 0 2 2 2 0 Transmembrane protein 237 SLATT_1 PF18181.1 gi|150400301|ref|YP_001324068.1| - 0.22 11.5 0.2 0.77 9.7 0.0 1.9 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 Phage_holin_3_6 PF07332.11 gi|150400301|ref|YP_001324068.1| - 0.64 10.1 9.1 18 5.4 0.1 3.1 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III Rubrerythrin PF02915.17 gi|150400302|ref|YP_001324069.1| - 2.1e-35 122.1 9.7 2.8e-35 121.7 9.7 1.2 1 0 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|150400302|ref|YP_001324069.1| - 1.3e-09 38.1 5.1 1.7e-09 37.7 5.1 1.2 1 0 0 1 1 1 1 Ferritin-like domain FA_desaturase_2 PF03405.14 gi|150400302|ref|YP_001324069.1| - 0.044 12.6 0.6 2 7.2 0.1 2.1 2 0 0 2 2 2 0 Fatty acid desaturase DZR PF12773.7 gi|150400302|ref|YP_001324069.1| - 0.054 13.5 2.5 0.087 12.9 2.5 1.3 1 0 0 1 1 1 0 Double zinc ribbon rpo30_N PF12410.8 gi|150400302|ref|YP_001324069.1| - 0.062 13.2 0.5 0.13 12.1 0.1 1.6 2 0 0 2 2 2 0 Poxvirus DNA dependent RNA polymerase 30kDa subunit HypA PF01155.19 gi|150400302|ref|YP_001324069.1| - 0.063 13.3 2.1 0.071 13.1 0.8 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF892 PF05974.12 gi|150400302|ref|YP_001324069.1| - 0.087 12.8 3.8 0.42 10.6 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF892) DNA_RNApol_7kD PF03604.13 gi|150400302|ref|YP_001324069.1| - 0.12 12.1 4.7 5.1 6.9 0.1 2.4 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit TFIIS_C PF01096.18 gi|150400302|ref|YP_001324069.1| - 0.16 11.9 5.0 0.75 9.7 1.2 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_2 PF13240.6 gi|150400302|ref|YP_001324069.1| - 0.24 11.2 3.7 1.1 9.0 3.6 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|150400302|ref|YP_001324069.1| - 1.2 8.7 7.3 0.41 10.1 0.9 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-Mss51 PF13824.6 gi|150400302|ref|YP_001324069.1| - 2.4 8.3 6.8 40 4.4 6.8 2.6 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Rio2_N PF09202.11 gi|150400303|ref|YP_001324070.1| - 0.056 13.7 0.0 0.2 11.9 0.0 1.9 1 0 0 1 1 1 0 Rio2, N-terminal Fe_dep_repr_C PF02742.15 gi|150400304|ref|YP_001324071.1| - 6.5e-27 93.4 0.8 3.7e-26 91.0 0.5 2.1 2 1 1 3 3 3 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|150400304|ref|YP_001324071.1| - 4.2e-18 65.3 0.0 7e-18 64.6 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 gi|150400304|ref|YP_001324071.1| - 4e-06 26.7 0.0 7.2e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|150400304|ref|YP_001324071.1| - 9.3e-05 22.2 0.0 0.00014 21.7 0.0 1.3 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|150400304|ref|YP_001324071.1| - 0.0015 18.8 0.0 0.0028 18.0 0.0 1.5 1 1 0 1 1 1 1 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|150400304|ref|YP_001324071.1| - 0.0015 18.4 0.0 0.0033 17.4 0.0 1.5 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 gi|150400304|ref|YP_001324071.1| - 0.031 14.1 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HrcA_DNA-bdg PF03444.15 gi|150400304|ref|YP_001324071.1| - 0.032 13.9 0.0 0.067 12.8 0.0 1.5 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding PPO1_DWL PF12142.8 gi|150400304|ref|YP_001324071.1| - 0.044 13.6 0.0 0.095 12.5 0.0 1.5 1 0 0 1 1 1 0 Polyphenol oxidase middle domain DnaI_N PF07319.11 gi|150400304|ref|YP_001324071.1| - 0.055 14.2 0.3 0.84 10.3 0.1 2.5 1 1 2 3 3 3 0 Primosomal protein DnaI N-terminus FeoA PF04023.14 gi|150400305|ref|YP_001324072.1| - 1e-13 51.3 0.0 1.7e-13 50.6 0.0 1.4 1 1 0 1 1 1 1 FeoA domain FeoB_N PF02421.18 gi|150400306|ref|YP_001324073.1| - 7e-63 210.8 0.2 1.1e-62 210.2 0.2 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|150400306|ref|YP_001324073.1| - 1.7e-32 112.0 17.7 8.8e-21 74.3 3.7 2.7 2 0 0 2 2 2 2 Nucleoside recognition FeoB_Cyto PF17910.1 gi|150400306|ref|YP_001324073.1| - 1.4e-18 67.2 3.3 3.3e-18 66.0 2.7 1.9 1 1 1 2 2 2 1 FeoB cytosolic helical domain MMR_HSR1 PF01926.23 gi|150400306|ref|YP_001324073.1| - 3.1e-18 65.9 0.0 7e-18 64.8 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|150400306|ref|YP_001324073.1| - 7.5e-16 57.6 0.4 3.1e-15 55.6 0.4 2.2 1 0 0 1 1 1 1 Ferrous iron transport protein B C terminus RsgA_GTPase PF03193.16 gi|150400306|ref|YP_001324073.1| - 2.8e-05 24.1 0.0 0.13 12.1 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase SRPRB PF09439.10 gi|150400306|ref|YP_001324073.1| - 0.00031 20.2 0.4 0.00074 19.0 0.0 1.8 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 gi|150400306|ref|YP_001324073.1| - 0.0017 17.9 0.1 0.26 10.8 0.1 2.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 gi|150400306|ref|YP_001324073.1| - 0.0071 15.7 0.0 0.025 13.9 0.0 1.8 1 1 1 2 2 2 1 AIG1 family DUF2062 PF09835.9 gi|150400306|ref|YP_001324073.1| - 0.0081 16.0 1.9 0.0081 16.0 1.9 3.5 4 0 0 4 4 4 1 Uncharacterized protein conserved in bacteria (DUF2062) Dynamin_N PF00350.23 gi|150400306|ref|YP_001324073.1| - 0.016 15.2 0.0 8.2 6.4 0.0 2.7 2 0 0 2 2 2 0 Dynamin family ScsC_N PF18312.1 gi|150400306|ref|YP_001324073.1| - 0.072 12.9 0.1 0.22 11.4 0.1 1.8 1 0 0 1 1 1 0 Copper resistance protein ScsC N-terminal domain Roc PF08477.13 gi|150400306|ref|YP_001324073.1| - 0.091 13.0 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_22 PF13401.6 gi|150400306|ref|YP_001324073.1| - 0.093 13.0 0.0 0.2 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|150400306|ref|YP_001324073.1| - 0.14 11.8 0.0 0.32 10.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain Spore_GerAC PF05504.11 gi|150400306|ref|YP_001324073.1| - 0.18 12.0 1.1 0.32 11.2 1.1 1.4 1 0 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal tRNA-synt_2d PF01409.20 gi|150400307|ref|YP_001324074.1| - 2.7e-57 194.0 0.0 5.7e-53 179.9 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) SepRS_C PF18006.1 gi|150400307|ref|YP_001324074.1| - 2.7e-11 43.3 2.9 2.7e-11 43.3 2.9 2.2 2 0 0 2 2 2 1 O-phosphoseryl-tRNA synthetase C-terminal domain tRNA_synthFbeta PF17759.1 gi|150400307|ref|YP_001324074.1| - 1.3e-10 41.1 0.0 5.3e-08 32.6 0.0 2.2 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2b PF00587.25 gi|150400307|ref|YP_001324074.1| - 0.0014 18.6 0.1 0.0054 16.7 0.0 2.1 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) DUF1729 PF08354.10 gi|150400307|ref|YP_001324074.1| - 0.18 10.7 0.1 15 4.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1729) Xan_ur_permease PF00860.20 gi|150400308|ref|YP_001324075.1| - 2e-51 174.9 49.5 2.4e-51 174.7 49.5 1.1 1 0 0 1 1 1 1 Permease family Beta-Casp PF10996.8 gi|150400309|ref|YP_001324076.1| - 1.3e-25 89.8 0.0 2.8e-25 88.8 0.0 1.6 1 0 0 1 1 1 1 Beta-Casp domain KH_7 PF17214.3 gi|150400309|ref|YP_001324076.1| - 3.2e-23 81.5 11.3 4.6e-23 81.0 0.4 4.1 5 0 0 5 5 5 1 KH domain RMMBL PF07521.12 gi|150400309|ref|YP_001324076.1| - 3.6e-14 52.4 0.0 8.1e-14 51.3 0.0 1.6 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|150400309|ref|YP_001324076.1| - 4e-13 49.3 0.0 7.6e-13 48.3 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|150400309|ref|YP_001324076.1| - 8.7e-13 48.7 1.2 2.4e-12 47.3 1.2 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|150400309|ref|YP_001324076.1| - 4.1e-10 39.5 0.0 7.4e-10 38.7 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|150400309|ref|YP_001324076.1| - 4.8e-06 26.3 1.3 1.9e-05 24.4 0.1 2.5 2 0 0 2 2 2 1 KH domain Lactamase_B_3 PF13483.6 gi|150400309|ref|YP_001324076.1| - 0.0033 17.3 0.0 0.0073 16.2 0.0 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_4 PF13083.6 gi|150400309|ref|YP_001324076.1| - 0.0054 16.6 0.1 0.017 15.0 0.1 1.9 1 0 0 1 1 1 1 KH domain LNP1 PF15419.6 gi|150400309|ref|YP_001324076.1| - 0.0055 17.0 0.0 0.01 16.1 0.0 1.3 1 0 0 1 1 1 1 Leukemia NUP98 fusion partner 1 KH_1 PF00013.29 gi|150400309|ref|YP_001324076.1| - 0.11 12.3 0.2 0.71 9.7 0.2 2.3 2 0 0 2 2 2 0 KH domain Proteasome PF00227.26 gi|150400310|ref|YP_001324077.1| - 2.4e-53 180.5 0.2 2.9e-53 180.2 0.2 1.1 1 0 0 1 1 1 1 Proteasome subunit ProRS-C_2 PF09181.10 gi|150400311|ref|YP_001324078.1| - 7.3e-27 93.3 1.9 7.3e-27 93.3 1.9 2.6 2 1 1 3 3 3 1 Prolyl-tRNA synthetase, C-terminal tRNA-synt_2b PF00587.25 gi|150400311|ref|YP_001324078.1| - 7.9e-25 87.9 0.0 1.4e-24 87.1 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|150400311|ref|YP_001324078.1| - 3.7e-15 55.8 0.6 7.2e-15 54.9 0.6 1.5 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_1 PF00133.22 gi|150400312|ref|YP_001324079.1| - 3e-68 230.5 2.4 1.1e-66 225.4 2.4 2.3 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|150400312|ref|YP_001324079.1| - 9.2e-24 83.9 2.6 2.5e-09 36.4 0.0 4.0 3 1 1 4 4 4 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|150400312|ref|YP_001324079.1| - 3.1e-21 75.9 0.5 8.6e-21 74.5 0.5 1.8 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.6 gi|150400312|ref|YP_001324079.1| - 3e-11 43.2 0.2 2e-10 40.5 0.1 2.3 1 1 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|150400312|ref|YP_001324079.1| - 0.0041 16.5 0.0 0.022 14.1 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain Ribosomal_S13 PF00416.22 gi|150400312|ref|YP_001324079.1| - 0.025 15.0 0.1 1.8 9.0 0.1 3.0 2 0 0 2 2 2 0 Ribosomal protein S13/S18 DUF1894 PF08979.11 gi|150400313|ref|YP_001324080.1| - 1.1e-31 109.0 0.3 1.3e-31 108.8 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) MatE PF01554.18 gi|150400314|ref|YP_001324081.1| - 2.6e-46 157.2 40.8 1.8e-25 89.5 18.6 2.5 2 1 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|150400314|ref|YP_001324081.1| - 1.3e-08 35.0 16.6 1.3e-08 35.0 16.6 4.5 5 1 0 5 5 5 2 Polysaccharide biosynthesis C-terminal domain PadR PF03551.14 gi|150400315|ref|YP_001324082.1| - 9.1e-16 57.6 0.8 1.9e-15 56.6 0.8 1.6 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_27 PF13463.6 gi|150400315|ref|YP_001324082.1| - 5e-05 23.7 0.0 7.1e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.6 gi|150400315|ref|YP_001324082.1| - 0.0033 17.6 0.5 0.008 16.3 0.5 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain FUR PF01475.19 gi|150400315|ref|YP_001324082.1| - 0.0048 17.0 0.3 0.0089 16.2 0.3 1.4 1 0 0 1 1 1 1 Ferric uptake regulator family TrmB PF01978.19 gi|150400315|ref|YP_001324082.1| - 0.012 15.5 1.2 0.063 13.2 1.2 2.2 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 gi|150400315|ref|YP_001324082.1| - 0.013 15.8 0.3 0.024 15.0 0.3 1.5 1 0 0 1 1 1 0 Penicillinase repressor B-block_TFIIIC PF04182.12 gi|150400315|ref|YP_001324082.1| - 0.034 14.3 0.1 0.064 13.4 0.1 1.6 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Replic_Relax PF13814.6 gi|150400315|ref|YP_001324082.1| - 0.13 12.3 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation DUF1890 PF09001.11 gi|150400316|ref|YP_001324083.1| - 1.2e-45 155.3 0.1 1.3e-45 155.2 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1890) RimK PF08443.11 gi|150400317|ref|YP_001324084.1| - 4.6e-32 111.1 0.1 6.3e-32 110.7 0.1 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|150400317|ref|YP_001324084.1| - 2.7e-12 46.5 0.0 4e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|150400317|ref|YP_001324084.1| - 4.4e-07 29.4 0.1 0.00087 18.6 0.0 2.8 1 1 1 2 2 2 2 YheC/D like ATP-grasp ATP-grasp_3 PF02655.14 gi|150400317|ref|YP_001324084.1| - 2.1e-05 24.6 0.2 0.00016 21.7 0.2 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|150400317|ref|YP_001324084.1| - 4e-05 23.0 0.1 0.022 14.0 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp GSP_synth PF03738.14 gi|150400317|ref|YP_001324084.1| - 0.004 16.4 0.0 0.0078 15.4 0.0 1.4 1 0 0 1 1 1 1 Glutathionylspermidine synthase preATP-grasp Rimk_N PF18030.1 gi|150400317|ref|YP_001324084.1| - 0.011 16.1 0.0 0.022 15.1 0.0 1.6 1 0 0 1 1 1 0 RimK PreATP-grasp domain ALIX_LYPXL_bnd PF13949.6 gi|150400317|ref|YP_001324084.1| - 0.21 10.8 0.1 0.36 10.1 0.1 1.4 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV Methyltransf_30 PF05430.11 gi|150400318|ref|YP_001324085.1| - 6.5e-25 87.4 0.0 1.2e-24 86.6 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Spermine_synth PF01564.17 gi|150400318|ref|YP_001324085.1| - 0.0065 15.9 0.1 0.024 14.0 0.0 2.0 2 0 0 2 2 2 1 Spermine/spermidine synthase domain MTS PF05175.14 gi|150400318|ref|YP_001324085.1| - 0.0073 15.9 0.0 0.015 14.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|150400318|ref|YP_001324085.1| - 0.18 12.5 0.0 0.54 11.0 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase domain ParA PF10609.9 gi|150400319|ref|YP_001324086.1| - 6.8e-93 310.6 0.2 9e-93 310.2 0.2 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|150400319|ref|YP_001324086.1| - 6.1e-12 45.7 0.0 1.9e-11 44.1 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|150400319|ref|YP_001324086.1| - 1.8e-11 44.3 0.3 7.7e-08 32.4 0.1 2.2 2 0 0 2 2 2 2 AAA domain Fer4_NifH PF00142.18 gi|150400319|ref|YP_001324086.1| - 1.3e-05 24.8 0.3 0.00013 21.5 0.2 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|150400319|ref|YP_001324086.1| - 3.1e-05 23.3 4.2 0.00027 20.2 1.0 2.7 2 1 1 3 3 3 1 Anion-transporting ATPase MipZ PF09140.11 gi|150400319|ref|YP_001324086.1| - 3.1e-05 23.4 2.1 0.00023 20.5 1.9 2.3 1 1 0 1 1 1 1 ATPase MipZ APS_kinase PF01583.20 gi|150400319|ref|YP_001324086.1| - 0.00017 21.5 0.0 0.00027 20.9 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase CBP_BcsQ PF06564.12 gi|150400319|ref|YP_001324086.1| - 0.002 17.6 0.0 0.073 12.5 0.1 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ RsgA_GTPase PF03193.16 gi|150400319|ref|YP_001324086.1| - 0.0031 17.4 1.3 0.0037 17.2 0.3 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_18 PF13238.6 gi|150400319|ref|YP_001324086.1| - 0.0052 17.3 0.0 0.011 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain CLP1_P PF16575.5 gi|150400319|ref|YP_001324086.1| - 0.0074 16.1 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop MeaB PF03308.16 gi|150400319|ref|YP_001324086.1| - 0.021 13.8 0.1 0.034 13.1 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 gi|150400319|ref|YP_001324086.1| - 0.024 14.2 0.0 0.045 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain VirC1 PF07015.11 gi|150400319|ref|YP_001324086.1| - 0.036 13.4 0.2 0.078 12.3 0.0 1.5 2 0 0 2 2 2 0 VirC1 protein SRP54 PF00448.22 gi|150400319|ref|YP_001324086.1| - 0.061 12.9 0.2 0.35 10.5 0.2 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain GTP_EFTU PF00009.27 gi|150400319|ref|YP_001324086.1| - 0.065 12.8 0.4 1.6 8.2 0.0 2.3 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain FTHFS PF01268.19 gi|150400319|ref|YP_001324086.1| - 0.14 10.4 0.8 0.23 9.6 0.2 1.6 2 0 0 2 2 2 0 Formate--tetrahydrofolate ligase NB-ARC PF00931.22 gi|150400319|ref|YP_001324086.1| - 0.16 11.1 0.6 0.24 10.5 0.6 1.2 1 0 0 1 1 1 0 NB-ARC domain zf_UBZ PF18439.1 gi|150400319|ref|YP_001324086.1| - 0.65 9.6 0.1 0.65 9.6 0.1 1.9 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Epimerase_2 PF02350.19 gi|150400320|ref|YP_001324087.1| - 1.6e-119 398.9 0.0 1.9e-119 398.6 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.6 gi|150400320|ref|YP_001324087.1| - 0.0012 18.8 0.0 0.0047 17.0 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|150400320|ref|YP_001324087.1| - 0.02 14.9 0.0 0.046 13.7 0.0 1.6 1 1 0 1 1 1 0 Glycosyltransferase Family 4 UDPG_MGDP_dh_N PF03721.14 gi|150400321|ref|YP_001324088.1| - 3.2e-55 186.6 0.8 8.3e-55 185.3 0.8 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|150400321|ref|YP_001324088.1| - 5.7e-27 93.8 0.7 1.5e-26 92.4 0.1 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|150400321|ref|YP_001324088.1| - 6.7e-25 87.5 0.1 5.9e-23 81.3 0.1 2.7 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|150400321|ref|YP_001324088.1| - 7.5e-09 36.0 0.1 1.4e-07 31.8 0.0 3.0 3 1 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 gi|150400321|ref|YP_001324088.1| - 2.7e-07 30.3 0.1 1e-06 28.5 0.0 2.0 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 gi|150400321|ref|YP_001324088.1| - 2.3e-06 27.1 0.2 0.00068 19.1 0.0 2.4 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|150400321|ref|YP_001324088.1| - 1.7e-05 25.0 4.0 6.6e-05 23.1 0.0 3.3 4 0 0 4 4 4 1 TrkA-N domain 3HCDH_N PF02737.18 gi|150400321|ref|YP_001324088.1| - 2.9e-05 24.0 0.1 0.0003 20.7 0.0 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|150400321|ref|YP_001324088.1| - 7.1e-05 23.3 1.7 0.0085 16.6 0.1 3.3 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 gi|150400321|ref|YP_001324088.1| - 0.0019 17.5 0.0 0.0052 16.1 0.0 1.7 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_2 PF07992.14 gi|150400321|ref|YP_001324088.1| - 0.0058 15.9 1.0 0.014 14.7 0.0 2.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|150400321|ref|YP_001324088.1| - 0.0079 16.7 0.8 0.035 14.7 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|150400321|ref|YP_001324088.1| - 0.0098 15.9 0.3 0.17 11.9 0.0 3.0 3 1 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IlvN PF07991.12 gi|150400321|ref|YP_001324088.1| - 0.018 14.6 0.1 1.2 8.7 0.0 2.6 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain UPF0146 PF03686.13 gi|150400321|ref|YP_001324088.1| - 0.036 14.0 0.0 0.14 12.0 0.0 2.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) EF-hand_14 PF17959.1 gi|150400321|ref|YP_001324088.1| - 0.036 14.4 0.4 0.26 11.7 0.1 2.2 2 0 0 2 2 2 0 EF-hand domain Shikimate_DH PF01488.20 gi|150400321|ref|YP_001324088.1| - 0.049 13.7 2.8 1.2 9.2 0.1 2.9 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase Epimerase PF01370.21 gi|150400321|ref|YP_001324088.1| - 0.057 12.9 0.0 0.2 11.1 0.0 1.9 1 1 1 2 2 2 0 NAD dependent epimerase/dehydratase family Sacchrp_dh_NADP PF03435.18 gi|150400321|ref|YP_001324088.1| - 0.085 13.1 0.2 0.99 9.7 0.0 2.4 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain TPMT PF05724.11 gi|150400321|ref|YP_001324088.1| - 0.086 12.5 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DAO PF01266.24 gi|150400321|ref|YP_001324088.1| - 0.26 10.8 0.1 0.47 10.0 0.1 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase Na_H_Exchanger PF00999.21 gi|150400322|ref|YP_001324089.1| - 8e-43 146.7 36.6 9.6e-43 146.4 36.6 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF1029 PF06269.12 gi|150400322|ref|YP_001324089.1| - 0.15 12.2 1.9 0.76 9.9 1.9 2.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1029) OST3_OST6 PF04756.13 gi|150400322|ref|YP_001324089.1| - 0.17 11.2 3.0 0.44 9.9 3.0 1.6 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family GWT1 PF06423.12 gi|150400322|ref|YP_001324089.1| - 0.35 11.0 2.3 0.35 11.0 0.2 2.1 2 0 0 2 2 2 0 GWT1 4HFCP_synth PF04476.13 gi|150400323|ref|YP_001324090.1| - 6.8e-90 300.8 0.1 7.7e-90 300.6 0.1 1.0 1 0 0 1 1 1 1 4-HFC-P synthase QRPTase_C PF01729.19 gi|150400323|ref|YP_001324090.1| - 0.0052 16.6 0.1 0.076 12.8 0.0 2.5 1 1 1 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain GHL6 PF14871.6 gi|150400323|ref|YP_001324090.1| - 0.011 15.9 0.1 0.95 9.6 0.0 2.5 2 1 0 2 2 2 0 Hypothetical glycosyl hydrolase 6 K-cyclin_vir_C PF09080.10 gi|150400323|ref|YP_001324090.1| - 0.1 13.0 0.0 0.25 11.8 0.0 1.6 1 0 0 1 1 1 0 K cyclin, C terminal CorA PF01544.18 gi|150400324|ref|YP_001324091.1| - 1.3e-71 241.3 7.4 1.5e-71 241.1 7.4 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein MscS_TM PF12794.7 gi|150400324|ref|YP_001324091.1| - 0.025 13.5 0.6 0.037 12.9 0.6 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Tetraspanin PF00335.20 gi|150400324|ref|YP_001324091.1| - 0.17 11.6 0.6 0.25 11.0 0.6 1.2 1 0 0 1 1 1 0 Tetraspanin family TPP_enzyme_C PF02775.21 gi|150400325|ref|YP_001324092.1| - 6.1e-27 94.3 0.1 1.1e-26 93.4 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|150400325|ref|YP_001324092.1| - 2.4e-13 50.4 0.0 3.8e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|150400325|ref|YP_001324092.1| - 5.1e-08 32.4 11.0 1.6e-05 24.5 2.1 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|150400325|ref|YP_001324092.1| - 1.9e-06 27.7 17.4 0.00036 20.5 2.0 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150400325|ref|YP_001324092.1| - 2.6e-06 27.2 11.8 0.0029 17.6 1.4 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|150400325|ref|YP_001324092.1| - 4.2e-05 23.6 11.0 0.00055 20.0 11.7 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150400325|ref|YP_001324092.1| - 8.8e-05 23.0 5.8 0.027 15.0 1.1 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150400325|ref|YP_001324092.1| - 0.00052 20.1 10.9 0.0048 17.0 11.1 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|150400325|ref|YP_001324092.1| - 0.0023 18.0 8.6 0.0061 16.7 8.6 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|150400325|ref|YP_001324092.1| - 0.0025 18.2 11.0 0.16 12.5 2.3 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain TPP_enzyme_N PF02776.18 gi|150400325|ref|YP_001324092.1| - 0.0088 15.7 0.1 0.015 14.9 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_15 PF13459.6 gi|150400325|ref|YP_001324092.1| - 0.78 10.5 7.3 6.5 7.6 0.6 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|150400325|ref|YP_001324092.1| - 0.81 10.6 9.4 0.63 10.9 2.6 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|150400325|ref|YP_001324092.1| - 4.7 7.7 12.5 3 8.4 2.5 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|150400325|ref|YP_001324092.1| - 5 7.7 12.4 1.9 9.1 2.0 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150400325|ref|YP_001324092.1| - 5.7 8.0 11.2 1.5 9.8 1.5 2.7 1 1 1 3 3 3 0 4Fe-4S double cluster binding domain POR PF01558.18 gi|150400326|ref|YP_001324093.1| - 3.6e-41 141.2 0.2 4e-41 141.0 0.2 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase AMP-binding_C_2 PF14535.6 gi|150400327|ref|YP_001324094.1| - 2.1e-33 114.5 0.3 7.8e-33 112.7 0.3 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|150400327|ref|YP_001324094.1| - 2.3e-10 39.6 0.0 3e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.12 gi|150400327|ref|YP_001324094.1| - 1.3e-05 24.4 0.1 0.014 14.4 0.0 2.2 2 0 0 2 2 2 2 Acyl-protein synthetase, LuxE ACT PF01842.25 gi|150400328|ref|YP_001324095.1| - 8e-14 51.1 0.1 2.7e-07 30.3 0.0 2.2 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 gi|150400328|ref|YP_001324095.1| - 9.9e-06 25.3 0.1 0.014 15.1 0.0 2.4 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 gi|150400328|ref|YP_001324095.1| - 3.7e-05 24.2 0.3 0.0018 18.8 0.2 2.2 2 0 0 2 2 2 1 ACT domain ACT_6 PF13740.6 gi|150400328|ref|YP_001324095.1| - 0.044 13.8 0.2 0.15 12.1 0.0 1.9 2 1 0 2 2 2 0 ACT domain Nitro_FeMo-Co PF02579.17 gi|150400328|ref|YP_001324095.1| - 0.052 13.9 0.0 0.14 12.5 0.0 1.7 2 0 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor NikR_C PF08753.11 gi|150400331|ref|YP_001324098.1| - 4.6e-07 29.9 0.0 7.5e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|150400331|ref|YP_001324098.1| - 5.1e-06 26.2 0.0 8.5e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|150400331|ref|YP_001324098.1| - 0.00087 19.5 0.1 0.0013 18.9 0.1 1.5 1 1 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family HicB_lk_antitox PF15919.5 gi|150400331|ref|YP_001324098.1| - 0.0031 17.6 0.1 0.0059 16.7 0.1 1.5 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF4375 PF14300.6 gi|150400331|ref|YP_001324098.1| - 0.009 16.3 0.1 0.013 15.8 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4375) Wx5_PLAF3D7 PF09688.10 gi|150400331|ref|YP_001324098.1| - 0.014 15.4 1.2 0.026 14.6 1.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (Wx5_PLAF3D7) DUF4085 PF13315.6 gi|150400331|ref|YP_001324098.1| - 0.036 13.7 2.5 3.1 7.4 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4085) ARL2_Bind_BART PF11527.8 gi|150400331|ref|YP_001324098.1| - 0.065 13.3 1.0 0.076 13.1 1.0 1.3 1 1 0 1 1 1 0 The ARF-like 2 binding protein BART Prismane PF03063.20 gi|150400332|ref|YP_001324099.1| - 9.6e-175 582.1 1.9 1.1e-174 582.0 1.9 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Fer4_9 PF13187.6 gi|150400333|ref|YP_001324100.1| - 6e-07 29.5 2.9 1.6e-06 28.1 2.9 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|150400333|ref|YP_001324100.1| - 2.5e-05 24.8 6.7 0.036 14.7 1.4 2.7 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|150400333|ref|YP_001324100.1| - 5.9e-05 23.1 9.4 6.4e-05 23.0 7.4 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|150400333|ref|YP_001324100.1| - 8e-05 23.5 5.7 0.019 15.9 1.1 2.8 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|150400333|ref|YP_001324100.1| - 0.00019 21.3 11.0 0.0027 17.7 1.6 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|150400333|ref|YP_001324100.1| - 0.00021 21.2 5.2 0.056 13.6 0.5 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|150400333|ref|YP_001324100.1| - 0.00038 20.1 15.1 0.00045 19.9 0.5 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|150400333|ref|YP_001324100.1| - 0.00041 20.4 2.6 0.00095 19.3 2.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|150400333|ref|YP_001324100.1| - 0.0068 16.5 5.5 0.0068 16.5 5.5 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|150400333|ref|YP_001324100.1| - 0.015 16.2 0.8 0.015 16.2 0.8 3.4 4 0 0 4 4 3 0 4Fe-4S binding domain PRMT5_TIM PF17285.2 gi|150400333|ref|YP_001324100.1| - 0.048 12.8 0.1 0.079 12.1 0.1 1.2 1 0 0 1 1 1 0 PRMT5 TIM barrel domain Fer4_4 PF12800.7 gi|150400333|ref|YP_001324100.1| - 0.062 13.8 10.0 0.45 11.2 1.0 3.5 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|150400333|ref|YP_001324100.1| - 2.3 8.8 9.5 40 4.8 2.9 3.9 2 1 1 3 3 3 0 4Fe-4S dicluster domain Cupin_2 PF07883.11 gi|150400334|ref|YP_001324101.1| - 0.0033 17.1 0.0 0.0047 16.6 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 gi|150400334|ref|YP_001324101.1| - 0.0047 16.6 0.0 0.0076 15.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) TaqI_C PF12950.7 gi|150400334|ref|YP_001324101.1| - 0.021 14.9 0.0 0.025 14.7 0.0 1.3 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain CENP-C_C PF11699.8 gi|150400334|ref|YP_001324101.1| - 0.13 12.5 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Mif2/CENP-C like KduI PF04962.12 gi|150400334|ref|YP_001324101.1| - 0.23 10.8 0.0 0.24 10.7 0.0 1.1 1 0 0 1 1 1 0 KduI/IolB family UvrB_inter PF17757.1 gi|150400336|ref|YP_001324103.1| - 2.5e-30 104.5 2.0 3.9e-30 103.9 0.7 2.1 2 0 0 2 2 1 1 UvrB interaction domain UvrB PF12344.8 gi|150400336|ref|YP_001324103.1| - 8e-22 76.8 1.6 2e-21 75.5 1.6 1.8 1 0 0 1 1 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|150400336|ref|YP_001324103.1| - 1.6e-17 63.8 0.2 5.7e-17 62.1 0.2 2.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|150400336|ref|YP_001324103.1| - 4.2e-13 49.7 0.2 6.8e-11 42.5 0.0 2.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit UVR PF02151.19 gi|150400336|ref|YP_001324103.1| - 4.1e-10 39.1 1.8 4.1e-10 39.1 1.8 2.1 2 0 0 2 2 2 1 UvrB/uvrC motif DEAD PF00270.29 gi|150400336|ref|YP_001324103.1| - 4.7e-05 23.2 0.0 0.0015 18.3 0.0 3.1 3 1 0 3 3 3 1 DEAD/DEAH box helicase AAA_19 PF13245.6 gi|150400336|ref|YP_001324103.1| - 0.0033 17.8 1.5 2.9 8.2 0.0 3.0 3 1 0 3 3 2 2 AAA domain fragilysinNterm PF16376.5 gi|150400336|ref|YP_001324103.1| - 0.0035 17.1 0.4 0.01 15.6 0.4 1.8 1 0 0 1 1 1 1 N-terminal domain of fragilysin UB2H PF14814.6 gi|150400336|ref|YP_001324103.1| - 0.027 14.5 0.0 0.17 12.0 0.0 2.5 3 1 0 3 3 3 0 Bifunctional transglycosylase second domain AAA_30 PF13604.6 gi|150400336|ref|YP_001324103.1| - 0.028 14.2 0.0 0.17 11.6 0.0 2.2 3 0 0 3 3 3 0 AAA domain Tox-HDC PF15656.6 gi|150400336|ref|YP_001324103.1| - 0.046 13.9 0.1 0.18 12.0 0.1 2.0 1 0 0 1 1 1 0 Toxin with a H, D/N and C signature DUF87 PF01935.17 gi|150400336|ref|YP_001324103.1| - 0.094 12.8 3.9 0.85 9.7 0.0 3.2 3 1 1 4 4 4 0 Helicase HerA, central domain TrwB_AAD_bind PF10412.9 gi|150400336|ref|YP_001324103.1| - 0.11 11.3 0.1 0.48 9.3 0.0 1.9 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain UvrD-helicase PF00580.21 gi|150400336|ref|YP_001324103.1| - 6.9 6.1 11.6 6.1 6.3 1.4 3.0 2 2 0 2 2 2 0 UvrD/REP helicase N-terminal domain UvrC_HhH_N PF08459.11 gi|150400337|ref|YP_001324104.1| - 1e-52 178.2 0.0 2.1e-52 177.1 0.0 1.6 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.24 gi|150400337|ref|YP_001324104.1| - 1.1e-13 51.2 5.4 1.6e-13 50.7 2.8 2.8 2 0 0 2 2 2 1 GIY-YIG catalytic domain UVR PF02151.19 gi|150400337|ref|YP_001324104.1| - 7e-05 22.4 2.8 0.00022 20.8 2.8 2.0 1 0 0 1 1 1 1 UvrB/uvrC motif RE_Eco29kI PF09517.10 gi|150400337|ref|YP_001324104.1| - 0.052 13.2 0.5 0.47 10.1 0.5 2.2 1 1 0 1 1 1 0 Eco29kI restriction endonuclease DUF87 PF01935.17 gi|150400337|ref|YP_001324104.1| - 0.4 10.7 7.5 0.089 12.9 3.3 2.0 2 0 0 2 2 2 0 Helicase HerA, central domain UvrA_inter PF17760.1 gi|150400338|ref|YP_001324105.1| - 7.6e-30 103.2 0.1 4.2e-29 100.8 0.1 2.4 2 0 0 2 2 2 1 UvrA interaction domain UvrA_DNA-bind PF17755.1 gi|150400338|ref|YP_001324105.1| - 3.1e-28 98.3 0.1 1.8e-26 92.6 0.1 2.8 2 0 0 2 2 2 1 UvrA DNA-binding domain ABC_tran PF00005.27 gi|150400338|ref|YP_001324105.1| - 2.6e-22 79.8 1.9 0.00021 21.8 0.0 4.8 4 1 0 4 4 4 4 ABC transporter SMC_N PF02463.19 gi|150400338|ref|YP_001324105.1| - 2.2e-08 33.8 10.1 0.035 13.5 0.3 4.3 3 2 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|150400338|ref|YP_001324105.1| - 3e-08 33.3 0.1 0.0038 16.9 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_14 PF13173.6 gi|150400338|ref|YP_001324105.1| - 5.1e-07 29.8 0.2 0.13 12.3 0.0 4.4 4 1 1 5 5 4 2 AAA domain AAA_16 PF13191.6 gi|150400338|ref|YP_001324105.1| - 5.8e-07 30.0 0.0 0.036 14.4 0.0 3.2 3 0 0 3 3 3 2 AAA ATPase domain AAA_21 PF13304.6 gi|150400338|ref|YP_001324105.1| - 2.6e-06 27.5 12.5 0.0055 16.6 0.0 4.8 5 0 0 5 5 5 3 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|150400338|ref|YP_001324105.1| - 1.7e-05 24.8 0.7 0.057 13.3 0.2 2.6 2 0 0 2 2 2 2 RsgA GTPase BCA_ABC_TP_C PF12399.8 gi|150400338|ref|YP_001324105.1| - 4.7e-05 23.2 0.4 0.014 15.3 0.1 2.6 2 0 0 2 2 2 1 Branched-chain amino acid ATP-binding cassette transporter AAA_18 PF13238.6 gi|150400338|ref|YP_001324105.1| - 8e-05 23.2 0.2 0.48 11.0 0.1 3.2 3 0 0 3 3 2 2 AAA domain DUF2075 PF09848.9 gi|150400338|ref|YP_001324105.1| - 0.00012 21.5 0.0 0.071 12.3 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 gi|150400338|ref|YP_001324105.1| - 0.00019 21.3 0.1 0.65 9.7 0.0 3.0 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 gi|150400338|ref|YP_001324105.1| - 0.00022 21.5 0.2 0.67 10.2 0.0 3.3 4 0 0 4 4 2 2 AAA domain AAA_25 PF13481.6 gi|150400338|ref|YP_001324105.1| - 0.00024 20.7 0.0 0.79 9.3 0.0 2.7 2 0 0 2 2 2 2 AAA domain ATPase PF06745.13 gi|150400338|ref|YP_001324105.1| - 0.00032 20.1 0.3 0.4 10.0 0.0 3.1 3 0 0 3 3 3 2 KaiC APS_kinase PF01583.20 gi|150400338|ref|YP_001324105.1| - 0.00043 20.2 0.0 0.8 9.6 0.0 2.9 2 0 0 2 2 2 2 Adenylylsulphate kinase DnaJ_CXXCXGXG PF00684.19 gi|150400338|ref|YP_001324105.1| - 0.00043 20.6 5.5 0.016 15.6 0.6 3.5 3 0 0 3 3 3 1 DnaJ central domain T2SSE PF00437.20 gi|150400338|ref|YP_001324105.1| - 0.00099 18.2 0.1 0.39 9.7 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_33 PF13671.6 gi|150400338|ref|YP_001324105.1| - 0.0014 18.8 0.1 1.2 9.3 0.0 2.9 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|150400338|ref|YP_001324105.1| - 0.0029 17.4 23.2 0.15 11.8 0.3 4.9 4 1 0 5 5 5 2 AAA ATPase domain AAA_23 PF13476.6 gi|150400338|ref|YP_001324105.1| - 0.0075 16.8 15.3 0.034 14.7 0.4 3.9 4 1 0 4 4 4 2 AAA domain AAA_24 PF13479.6 gi|150400338|ref|YP_001324105.1| - 0.0082 15.9 0.2 8.4 6.1 0.0 3.1 3 0 0 3 3 3 0 AAA domain cobW PF02492.19 gi|150400338|ref|YP_001324105.1| - 0.014 15.0 0.0 2 8.0 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 gi|150400338|ref|YP_001324105.1| - 0.016 14.9 0.0 7.8 6.2 0.0 3.0 3 0 0 3 3 3 0 AAA domain ATPase_2 PF01637.18 gi|150400338|ref|YP_001324105.1| - 0.021 14.8 1.2 3.5 7.5 0.0 3.4 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 gi|150400338|ref|YP_001324105.1| - 0.032 14.1 1.1 12 5.8 0.0 3.3 3 0 0 3 3 3 0 NTPase MeaB PF03308.16 gi|150400338|ref|YP_001324105.1| - 0.033 13.2 0.1 6.6 5.6 0.0 2.5 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 gi|150400338|ref|YP_001324105.1| - 0.034 14.1 0.0 10 6.0 0.0 2.4 2 0 0 2 2 2 0 NACHT domain RNA_helicase PF00910.22 gi|150400338|ref|YP_001324105.1| - 0.054 13.9 0.1 12 6.4 0.0 3.1 3 0 0 3 3 2 0 RNA helicase Exonuc_VII_S PF02609.16 gi|150400339|ref|YP_001324106.1| - 8.8e-16 57.7 4.4 1.1e-15 57.5 4.4 1.1 1 0 0 1 1 1 1 Exonuclease VII small subunit YkyA PF10368.9 gi|150400339|ref|YP_001324106.1| - 0.00043 20.0 2.4 0.00045 19.9 2.4 1.0 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein DUF812 PF05667.11 gi|150400339|ref|YP_001324106.1| - 0.11 11.4 2.0 0.12 11.2 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Exonuc_VII_L PF02601.15 gi|150400340|ref|YP_001324107.1| - 1.8e-82 277.3 0.1 7.8e-79 265.4 0.1 2.1 1 1 0 1 1 1 1 Exonuclease VII, large subunit tRNA_anti_2 PF13742.6 gi|150400340|ref|YP_001324107.1| - 1.7e-27 95.5 0.0 3.2e-27 94.6 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti-codon PF01336.25 gi|150400340|ref|YP_001324107.1| - 1.3e-09 37.9 0.0 2.9e-09 36.8 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain ABC_sub_bind PF04392.12 gi|150400340|ref|YP_001324107.1| - 0.029 13.6 0.8 0.32 10.2 0.0 2.2 2 0 0 2 2 2 0 ABC transporter substrate binding protein RecJ_OB PF17768.1 gi|150400340|ref|YP_001324107.1| - 0.031 14.5 0.0 0.1 12.9 0.0 1.9 1 0 0 1 1 1 0 RecJ OB domain MatE PF01554.18 gi|150400341|ref|YP_001324108.1| - 1.1e-36 125.9 39.8 8.6e-21 74.3 12.7 3.0 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|150400341|ref|YP_001324108.1| - 0.00099 19.2 24.5 0.00099 19.2 24.5 5.0 1 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain EB1 PF03271.17 gi|150400342|ref|YP_001324109.1| - 0.01 16.0 0.3 0.29 11.4 0.0 2.2 2 0 0 2 2 2 0 EB1-like C-terminal motif PRC PF05239.16 gi|150400343|ref|YP_001324110.1| - 1.2e-11 44.5 0.5 1.4e-11 44.3 0.5 1.1 1 0 0 1 1 1 1 PRC-barrel domain DUF108 PF01958.18 gi|150400344|ref|YP_001324111.1| - 1.9e-29 101.8 0.5 3e-29 101.2 0.5 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.16 gi|150400344|ref|YP_001324111.1| - 1.8e-23 83.4 0.2 3.8e-23 82.4 0.2 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|150400344|ref|YP_001324111.1| - 1.7e-05 25.6 0.0 3.1e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold F420_oxidored PF03807.17 gi|150400344|ref|YP_001324111.1| - 8.7e-05 23.0 0.3 0.00021 21.8 0.3 1.8 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|150400344|ref|YP_001324111.1| - 0.00052 20.1 0.4 0.0053 16.8 0.0 2.3 2 1 1 3 3 3 1 Shikimate / quinate 5-dehydrogenase OCD_Mu_crystall PF02423.15 gi|150400344|ref|YP_001324111.1| - 0.014 14.4 0.1 0.019 13.9 0.1 1.2 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family GTP_EFTU_D2 PF03144.25 gi|150400345|ref|YP_001324112.1| - 7.3e-09 35.9 2.5 1.1e-08 35.3 0.6 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 eIF2_C PF09173.11 gi|150400345|ref|YP_001324112.1| - 0.0018 18.5 0.0 0.0042 17.3 0.0 1.6 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal DUF3221 PF11518.8 gi|150400347|ref|YP_001324114.1| - 0.00052 20.3 0.1 0.33 11.3 0.1 2.6 2 1 0 2 2 2 2 Protein of unknown function (DUF3221) VGPC1_C PF16799.5 gi|150400347|ref|YP_001324114.1| - 0.19 11.7 0.0 0.34 10.9 0.0 1.4 1 0 0 1 1 1 0 C-terminal membrane-localisation domain of ion-channel, VCN1 LysE PF01810.18 gi|150400348|ref|YP_001324115.1| - 2.5e-30 105.4 10.1 3e-30 105.1 10.1 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 gi|150400348|ref|YP_001324115.1| - 0.0045 16.7 7.7 0.026 14.2 7.7 2.0 1 1 0 1 1 1 1 Integral membrane protein TerC family SelR PF01641.18 gi|150400349|ref|YP_001324116.1| - 4.8e-52 175.1 0.1 5.5e-52 175.0 0.1 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 gi|150400349|ref|YP_001324116.1| - 0.036 14.3 2.5 0.099 12.9 2.5 1.8 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF2197 PF09963.9 gi|150400349|ref|YP_001324116.1| - 0.087 13.1 2.0 0.11 12.7 0.0 2.0 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) Tnp_zf-ribbon_2 PF13842.6 gi|150400349|ref|YP_001324116.1| - 0.12 13.2 5.2 0.91 10.4 1.1 2.3 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon TF_Zn_Ribbon PF08271.12 gi|150400349|ref|YP_001324116.1| - 0.17 11.4 5.2 1.2 8.7 0.0 2.9 3 0 0 3 3 3 0 TFIIB zinc-binding zinc_ribbon_10 PF10058.9 gi|150400349|ref|YP_001324116.1| - 0.25 11.1 7.1 2.1 8.1 1.5 2.3 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein HECT_2 PF09814.9 gi|150400349|ref|YP_001324116.1| - 0.26 10.1 2.7 6.9 5.4 0.6 2.0 1 1 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding Endonuclease_7 PF02945.15 gi|150400349|ref|YP_001324116.1| - 0.77 9.7 4.0 3.9 7.5 4.0 2.2 1 1 0 1 1 1 0 Recombination endonuclease VII zf-RRN7 PF11781.8 gi|150400349|ref|YP_001324116.1| - 0.84 9.4 3.5 5.4 6.8 0.1 3.2 3 0 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 BaxI_1 PF12811.7 gi|150400351|ref|YP_001324118.1| - 1.2e-78 263.9 16.8 1.3e-78 263.8 16.8 1.0 1 0 0 1 1 1 1 Bax inhibitor 1 like Bax1-I PF01027.20 gi|150400351|ref|YP_001324118.1| - 8.1e-09 35.6 32.0 1e-08 35.3 32.0 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF4364 PF14277.6 gi|150400352|ref|YP_001324119.1| - 0.023 14.5 0.1 0.024 14.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) Put_DNA-bind_N PF06971.13 gi|150400352|ref|YP_001324119.1| - 0.16 12.0 0.1 0.37 10.8 0.1 1.7 1 1 1 2 2 2 0 Putative DNA-binding protein N-terminus ABC_tran PF00005.27 gi|150400353|ref|YP_001324120.1| - 4.8e-27 95.2 0.1 1.1e-26 94.0 0.1 1.6 1 0 0 1 1 1 1 ABC transporter AAA_23 PF13476.6 gi|150400353|ref|YP_001324120.1| - 0.00014 22.4 9.3 0.00018 22.1 5.1 2.6 2 1 0 2 2 2 1 AAA domain AAA_21 PF13304.6 gi|150400353|ref|YP_001324120.1| - 0.00061 19.7 5.8 0.14 11.9 0.8 2.6 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|150400353|ref|YP_001324120.1| - 0.014 15.1 0.0 0.033 13.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 gi|150400353|ref|YP_001324120.1| - 0.016 14.7 1.2 2.6 7.4 0.2 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Arf PF00025.21 gi|150400353|ref|YP_001324120.1| - 0.024 14.1 0.2 0.11 12.0 0.0 2.1 2 0 0 2 2 2 0 ADP-ribosylation factor family SRP54 PF00448.22 gi|150400353|ref|YP_001324120.1| - 0.078 12.6 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_22 PF13401.6 gi|150400353|ref|YP_001324120.1| - 0.17 12.1 0.4 0.51 10.6 0.4 1.8 1 1 0 1 1 1 0 AAA domain DUF364 PF04016.12 gi|150400354|ref|YP_001324121.1| - 2.5e-10 40.1 0.0 4.9e-10 39.2 0.0 1.4 1 1 0 1 1 1 1 Putative heavy-metal chelation BPD_transp_1 PF00528.22 gi|150400355|ref|YP_001324122.1| - 1.3e-18 67.4 13.2 1.3e-18 67.4 13.2 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2663 PF10864.8 gi|150400355|ref|YP_001324122.1| - 9.3 6.7 6.7 5.9 7.3 2.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2663) SBP_bac_11 PF13531.6 gi|150400356|ref|YP_001324123.1| - 6.6e-33 114.4 0.0 7.5e-33 114.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|150400356|ref|YP_001324123.1| - 6.3e-05 23.1 0.0 0.0001 22.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.20 gi|150400356|ref|YP_001324123.1| - 0.0079 15.6 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 PBP_like PF12727.7 gi|150400356|ref|YP_001324123.1| - 0.023 13.8 0.0 0.14 11.3 0.0 2.0 2 0 0 2 2 2 0 PBP superfamily domain APOBEC1 PF18769.1 gi|150400356|ref|YP_001324123.1| - 0.12 12.7 0.1 0.7 10.2 0.0 2.0 2 0 0 2 2 2 0 APOBEC1 TetR_N PF00440.23 gi|150400357|ref|YP_001324124.1| - 7.2e-14 51.3 0.1 1.4e-13 50.4 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family UPF0122 PF04297.14 gi|150400357|ref|YP_001324124.1| - 0.053 13.8 0.5 0.11 12.8 0.1 1.8 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like EDS1_EP PF18117.1 gi|150400357|ref|YP_001324124.1| - 0.089 13.2 0.1 0.47 10.9 0.0 2.0 1 1 0 2 2 2 0 Enhanced disease susceptibility 1 protein EP domain TetR_C_6 PF13977.6 gi|150400357|ref|YP_001324124.1| - 0.15 12.3 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal TetR_C_3 PF08362.11 gi|150400358|ref|YP_001324125.1| - 0.044 13.7 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 YcdC-like protein, C-terminal region Cauli_VI PF01693.16 gi|150400359|ref|YP_001324126.1| - 2.1e-18 66.3 0.6 4.1e-18 65.4 0.6 1.5 1 0 0 1 1 1 1 Caulimovirus viroplasmin RNase_H PF00075.24 gi|150400359|ref|YP_001324126.1| - 9e-12 45.4 0.1 1.7e-11 44.5 0.1 1.4 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.6 gi|150400359|ref|YP_001324126.1| - 0.00093 19.0 0.0 0.0014 18.4 0.0 1.3 1 0 0 1 1 1 1 Reverse transcriptase-like HGD-D PF06050.13 gi|150400360|ref|YP_001324127.1| - 6.3e-84 282.5 0.2 7.1e-84 282.3 0.2 1.0 1 0 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component DUF2112 PF09885.9 gi|150400360|ref|YP_001324127.1| - 0.0025 17.9 0.3 0.13 12.3 0.1 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2112) 5_3_exonuc PF01367.20 gi|150400360|ref|YP_001324127.1| - 0.017 15.7 0.4 0.048 14.3 0.4 1.8 1 0 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold Erf4 PF10256.9 gi|150400360|ref|YP_001324127.1| - 0.018 15.1 1.1 0.19 11.9 0.1 2.7 3 0 0 3 3 3 0 Golgin subfamily A member 7/ERF4 family YbjQ_1 PF01906.17 gi|150400361|ref|YP_001324128.1| - 2.8e-34 117.9 0.1 3.1e-34 117.7 0.1 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding Ribosomal_L18_c PF14204.6 gi|150400361|ref|YP_001324128.1| - 0.11 13.4 0.0 0.17 12.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal L18 C-terminal region HemY_N PF07219.13 gi|150400362|ref|YP_001324129.1| - 0.0011 19.1 9.6 0.099 12.8 2.3 3.1 3 0 0 3 3 3 2 HemY protein N-terminus Phage_holin_3_6 PF07332.11 gi|150400362|ref|YP_001324129.1| - 0.0017 18.4 12.3 0.031 14.3 1.0 2.2 2 0 0 2 2 2 2 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 gi|150400362|ref|YP_001324129.1| - 0.0021 18.0 14.6 0.1 12.5 2.3 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF2975) Claudin_2 PF13903.6 gi|150400362|ref|YP_001324129.1| - 0.079 12.7 7.9 0.29 10.9 0.4 2.1 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction DAP10 PF07213.11 gi|150400362|ref|YP_001324129.1| - 0.12 12.4 5.3 0.22 11.5 0.5 2.5 2 0 0 2 2 2 0 DAP10 membrane protein DUF2207 PF09972.9 gi|150400362|ref|YP_001324129.1| - 1.5 7.5 18.6 0.13 11.0 4.7 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) EI24 PF07264.11 gi|150400362|ref|YP_001324129.1| - 1.8 8.8 19.7 10 6.4 19.8 2.1 1 1 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) HTH_7 PF02796.15 gi|150400364|ref|YP_001324131.1| - 0.0076 16.3 0.1 0.028 14.5 0.1 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_psq PF05225.16 gi|150400364|ref|YP_001324131.1| - 0.0083 15.8 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 helix-turn-helix, Psq domain Ribonucleas_3_3 PF14622.6 gi|150400364|ref|YP_001324131.1| - 0.0084 16.3 0.3 0.014 15.6 0.2 1.5 1 1 0 1 1 1 1 Ribonuclease-III-like HTH_23 PF13384.6 gi|150400364|ref|YP_001324131.1| - 0.0096 15.7 0.0 0.028 14.2 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain GerE PF00196.19 gi|150400364|ref|YP_001324131.1| - 0.012 15.1 0.5 0.03 13.9 0.4 1.7 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family SpoIIID PF12116.8 gi|150400364|ref|YP_001324131.1| - 0.014 15.5 0.2 0.029 14.5 0.2 1.7 1 0 0 1 1 1 0 Stage III sporulation protein D HTH_Tnp_1 PF01527.20 gi|150400364|ref|YP_001324131.1| - 0.017 15.4 0.1 0.027 14.8 0.1 1.4 1 0 0 1 1 1 0 Transposase HTH_40 PF14493.6 gi|150400364|ref|YP_001324131.1| - 0.017 15.6 3.5 0.045 14.2 3.3 2.0 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|150400364|ref|YP_001324131.1| - 0.063 13.4 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|150400364|ref|YP_001324131.1| - 0.1 12.0 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Phage_integrase PF00589.22 gi|150400365|ref|YP_001324132.1| - 6.3e-27 94.5 0.3 9.1e-27 93.9 0.3 1.2 1 0 0 1 1 1 1 Phage integrase family DEAD PF00270.29 gi|150400366|ref|YP_001324133.1| - 1.7e-49 167.9 0.2 3.4e-49 167.0 0.2 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|150400366|ref|YP_001324133.1| - 8.9e-33 113.0 3.0 8.6e-31 106.6 0.0 3.8 4 1 0 4 4 4 1 Helicase conserved C-terminal domain DbpA PF03880.15 gi|150400366|ref|YP_001324133.1| - 3.3e-17 62.2 1.3 1.6e-16 60.0 1.3 2.3 1 0 0 1 1 1 1 DbpA RNA binding domain ResIII PF04851.15 gi|150400366|ref|YP_001324133.1| - 3.8e-09 36.8 0.8 2e-08 34.5 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 gi|150400366|ref|YP_001324133.1| - 6.4e-05 22.4 4.0 0.0018 17.7 0.1 2.5 2 0 0 2 2 2 2 U3-containing 90S pre-ribosomal complex subunit AAA_30 PF13604.6 gi|150400366|ref|YP_001324133.1| - 0.013 15.2 0.0 0.031 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain Helicase_RecD PF05127.14 gi|150400366|ref|YP_001324133.1| - 0.019 14.8 0.1 0.053 13.4 0.0 1.9 2 0 0 2 2 2 0 Helicase AAA_19 PF13245.6 gi|150400366|ref|YP_001324133.1| - 0.02 15.2 0.6 0.07 13.5 0.2 2.2 2 1 0 2 2 2 0 AAA domain DIRP PF06584.13 gi|150400368|ref|YP_001324135.1| - 0.14 12.4 0.0 0.4 10.9 0.0 1.7 1 0 0 1 1 1 0 DIRP DUF5104 PF17117.5 gi|150400368|ref|YP_001324135.1| - 10 6.6 10.3 2 8.9 0.8 3.5 4 0 0 4 4 4 0 Domain of unknown function (DUF5104) DNA_methylase PF00145.17 gi|150400370|ref|YP_001324137.1| - 8e-77 258.8 0.1 8e-76 255.5 0.1 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase Phage_integrase PF00589.22 gi|150400371|ref|YP_001324138.1| - 3.1e-31 108.5 0.0 5.7e-31 107.6 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|150400371|ref|YP_001324138.1| - 3.1e-14 53.2 1.4 6.7e-14 52.1 1.4 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 gi|150400371|ref|YP_001324138.1| - 0.00068 19.9 5.5 0.00068 19.9 5.5 2.4 3 0 0 3 3 3 1 Phage integrase SAM-like domain Phage_int_SAM_1 PF02899.17 gi|150400371|ref|YP_001324138.1| - 0.0011 19.2 1.4 0.05 13.9 0.9 2.3 1 1 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain DUF2540 PF10802.8 gi|150400372|ref|YP_001324139.1| - 3.1e-26 91.3 1.5 3.5e-26 91.1 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2540) RasGEF_N_2 PF14663.6 gi|150400373|ref|YP_001324140.1| - 0.0056 17.1 0.7 0.021 15.2 0.2 2.0 1 1 0 2 2 2 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain PTP2 PF17022.5 gi|150400373|ref|YP_001324140.1| - 0.047 13.3 1.3 0.069 12.8 1.3 1.2 1 0 0 1 1 1 0 Polar tube protein 2 from Microsporidia Gal_Lectin PF02140.18 gi|150400373|ref|YP_001324140.1| - 0.16 12.4 0.2 0.26 11.7 0.2 1.3 1 0 0 1 1 1 0 Galactose binding lectin domain DUF2087 PF09860.9 gi|150400374|ref|YP_001324141.1| - 0.033 14.3 0.0 0.098 12.8 0.0 1.9 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) HTH_WhiA PF02650.14 gi|150400375|ref|YP_001324142.1| - 0.0017 18.6 1.1 0.005 17.1 0.4 1.9 2 0 0 2 2 2 1 WhiA C-terminal HTH domain KAP_NTPase PF07693.14 gi|150400376|ref|YP_001324143.1| - 3.9e-36 124.9 0.4 1.1e-35 123.4 0.4 1.7 1 1 0 1 1 1 1 KAP family P-loop domain PI3Ka PF00613.20 gi|150400376|ref|YP_001324143.1| - 0.026 13.9 0.0 4.6 6.6 0.0 2.7 2 0 0 2 2 2 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) MCM_OB PF17207.3 gi|150400377|ref|YP_001324144.1| - 5.6e-12 45.6 1.2 1e-11 44.8 1.2 1.4 1 0 0 1 1 1 1 MCM OB domain DZR PF12773.7 gi|150400377|ref|YP_001324144.1| - 0.053 13.6 0.3 0.11 12.5 0.3 1.5 1 0 0 1 1 1 0 Double zinc ribbon Auto_anti-p27 PF06677.12 gi|150400377|ref|YP_001324144.1| - 0.058 13.6 0.3 3.7 7.8 0.1 2.5 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) MCM_N PF14551.6 gi|150400377|ref|YP_001324144.1| - 0.11 13.0 0.1 0.22 12.1 0.1 1.5 1 0 0 1 1 1 0 MCM N-terminal domain SIR2_2 PF13289.6 gi|150400380|ref|YP_001324147.1| - 0.002 18.2 0.0 0.076 13.1 0.0 2.3 2 0 0 2 2 2 2 SIR2-like domain DUF2283 PF10049.9 gi|150400381|ref|YP_001324148.1| - 0.00059 20.0 3.5 0.00059 20.0 3.5 2.3 2 1 0 2 2 2 1 Protein of unknown function (DUF2283) FMN_bind PF04205.14 gi|150400381|ref|YP_001324148.1| - 0.038 14.6 0.1 0.05 14.2 0.1 1.3 1 0 0 1 1 1 0 FMN-binding domain DUF4258 PF14076.6 gi|150400382|ref|YP_001324149.1| - 0.00024 21.4 0.0 0.00036 20.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4258) Chordopox_A33R PF05966.12 gi|150400382|ref|YP_001324149.1| - 0.088 12.1 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 Chordopoxvirus A33R protein AAA PF00004.29 gi|150400383|ref|YP_001324150.1| - 0.008 16.6 0.1 0.25 11.7 0.1 3.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) K_oxygenase PF13434.6 gi|150400383|ref|YP_001324150.1| - 0.013 14.7 0.0 0.024 13.8 0.0 1.4 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) AAA_24 PF13479.6 gi|150400383|ref|YP_001324150.1| - 0.028 14.2 0.1 0.15 11.8 0.1 2.3 1 0 0 1 1 1 0 AAA domain Phage_integrase PF00589.22 gi|150400384|ref|YP_001324151.1| - 2.5e-34 118.5 0.1 5.4e-34 117.5 0.0 1.5 2 0 0 2 2 2 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|150400384|ref|YP_001324151.1| - 1.7e-13 50.9 0.4 3.9e-13 49.7 0.3 1.7 1 1 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|150400384|ref|YP_001324151.1| - 1.1e-05 25.6 0.8 0.00073 19.8 0.7 3.1 3 0 0 3 3 3 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 gi|150400384|ref|YP_001324151.1| - 0.00064 20.0 4.0 0.00064 20.0 4.0 2.6 3 0 0 3 3 3 1 Phage integrase SAM-like domain Rad50_zn_hook PF04423.14 gi|150400385|ref|YP_001324152.1| - 0.036 13.9 1.4 0.12 12.2 0.2 1.9 2 0 0 2 2 2 0 Rad50 zinc hook motif UPF0728 PF15092.6 gi|150400387|ref|YP_001324154.1| - 0.043 13.7 0.1 0.051 13.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 DZR PF12773.7 gi|150400388|ref|YP_001324155.1| - 0.00042 20.3 1.1 0.00076 19.4 1.1 1.4 1 0 0 1 1 1 1 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|150400388|ref|YP_001324155.1| - 0.0021 18.1 0.7 0.32 11.2 0.3 2.6 3 0 0 3 3 2 1 Zinc ribbon domain Phage_Mu_Gam PF07352.12 gi|150400388|ref|YP_001324155.1| - 0.0026 17.7 0.1 0.0045 16.9 0.0 1.5 2 0 0 2 2 1 1 Bacteriophage Mu Gam like protein Ribosomal_S27 PF01599.19 gi|150400388|ref|YP_001324155.1| - 0.0026 17.9 0.1 0.0083 16.3 0.1 1.8 2 0 0 2 2 2 1 Ribosomal protein S27a OrfB_Zn_ribbon PF07282.11 gi|150400388|ref|YP_001324155.1| - 0.0065 16.4 1.3 0.015 15.2 1.3 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.6 gi|150400388|ref|YP_001324155.1| - 0.0069 16.1 1.6 2 8.3 0.4 2.5 2 0 0 2 2 2 1 zinc-ribbon domain FYVE_2 PF02318.16 gi|150400388|ref|YP_001324155.1| - 0.0099 16.1 0.5 0.019 15.2 0.5 1.4 1 0 0 1 1 1 1 FYVE-type zinc finger HypA PF01155.19 gi|150400388|ref|YP_001324155.1| - 0.013 15.5 0.5 0.024 14.7 0.5 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|150400388|ref|YP_001324155.1| - 0.014 14.9 4.4 0.055 13.0 4.5 2.0 1 1 1 2 2 2 0 TFIIB zinc-binding zinc-ribbons_6 PF07191.12 gi|150400388|ref|YP_001324155.1| - 0.014 15.3 1.1 0.03 14.3 1.1 1.5 1 0 0 1 1 1 0 zinc-ribbons Zn_Tnp_IS91 PF14319.6 gi|150400388|ref|YP_001324155.1| - 0.02 14.9 0.4 0.033 14.2 0.4 1.5 1 0 0 1 1 1 0 Transposase zinc-binding domain Nudix_N_2 PF14803.6 gi|150400388|ref|YP_001324155.1| - 0.021 14.7 2.2 5 7.1 0.2 2.5 2 0 0 2 2 2 0 Nudix N-terminal DNA_RNApol_7kD PF03604.13 gi|150400388|ref|YP_001324155.1| - 0.027 14.2 0.7 1 9.1 0.3 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit PhnA_Zn_Ribbon PF08274.12 gi|150400388|ref|YP_001324155.1| - 0.035 14.1 4.5 0.28 11.2 4.5 2.4 2 1 1 3 3 3 0 PhnA Zinc-Ribbon zf-trcl PF13451.6 gi|150400388|ref|YP_001324155.1| - 0.043 13.7 0.6 11 6.0 0.1 2.7 2 0 0 2 2 2 0 Probable zinc-ribbon domain Tmemb_55A PF09788.9 gi|150400388|ref|YP_001324155.1| - 0.053 12.6 0.2 0.063 12.4 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 55A Zn_Tnp_IS1595 PF12760.7 gi|150400388|ref|YP_001324155.1| - 0.059 13.4 0.2 0.16 12.0 0.2 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Pim PF16765.5 gi|150400388|ref|YP_001324155.1| - 0.06 13.5 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 Pesticin immunity protein RNA_POL_M_15KD PF02150.16 gi|150400388|ref|YP_001324155.1| - 0.12 12.3 2.9 0.25 11.3 2.9 1.4 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit C1_2 PF03107.16 gi|150400388|ref|YP_001324155.1| - 0.24 11.7 3.2 0.36 11.2 2.7 1.5 1 1 0 1 1 1 0 C1 domain zf_UBZ PF18439.1 gi|150400388|ref|YP_001324155.1| - 0.25 11.0 4.9 0.26 10.9 0.5 2.3 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger Rubredoxin_2 PF18073.1 gi|150400388|ref|YP_001324155.1| - 0.4 10.4 2.3 2.7 7.8 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain ADK_lid PF05191.14 gi|150400388|ref|YP_001324155.1| - 0.49 10.4 3.6 18 5.4 0.2 2.8 3 0 0 3 3 3 0 Adenylate kinase, active site lid DUF2757 PF10955.8 gi|150400388|ref|YP_001324155.1| - 0.56 10.5 7.2 21 5.4 0.1 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF2757) zf-C4_Topoisom PF01396.19 gi|150400388|ref|YP_001324155.1| - 0.65 9.8 4.9 2.5 8.0 0.1 2.3 1 1 1 2 2 2 0 Topoisomerase DNA binding C4 zinc finger A2L_zn_ribbon PF08792.10 gi|150400388|ref|YP_001324155.1| - 1 9.1 5.8 1.4 8.7 4.5 1.9 1 1 1 2 2 2 0 A2L zinc ribbon domain zf-dskA_traR PF01258.17 gi|150400388|ref|YP_001324155.1| - 1.1 9.2 4.8 12 5.9 0.6 3.3 3 1 0 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger zf_C2H2_13 PF18508.1 gi|150400388|ref|YP_001324155.1| - 2.1 8.0 6.5 2.1 8.0 0.6 2.8 2 1 1 3 3 2 0 Zinc finger domain DUF2080 PF09853.9 gi|150400389|ref|YP_001324156.1| - 7.2e-12 44.9 0.1 8.4e-12 44.7 0.1 1.1 1 0 0 1 1 1 1 Putative transposon-encoded protein (DUF2080) PadR PF03551.14 gi|150400390|ref|YP_001324157.1| - 6.6e-07 29.2 0.9 1.4e-06 28.2 0.6 1.8 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family TFIIE_alpha PF02002.17 gi|150400390|ref|YP_001324157.1| - 7.3e-06 25.8 1.9 1e-05 25.3 1.5 1.5 1 1 0 1 1 1 1 TFIIE alpha subunit HxlR PF01638.17 gi|150400390|ref|YP_001324157.1| - 1.6e-05 24.7 0.2 2e-05 24.3 0.2 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_34 PF13601.6 gi|150400390|ref|YP_001324157.1| - 2.6e-05 24.3 0.2 4e-05 23.7 0.2 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|150400390|ref|YP_001324157.1| - 2.8e-05 24.0 0.1 4.9e-05 23.2 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|150400390|ref|YP_001324157.1| - 0.00016 21.5 0.1 0.00032 20.5 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|150400390|ref|YP_001324157.1| - 0.00035 20.6 0.0 0.00049 20.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|150400390|ref|YP_001324157.1| - 0.00039 20.3 0.9 0.00052 19.9 0.2 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|150400390|ref|YP_001324157.1| - 0.0023 17.5 0.1 0.0033 16.9 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_45 PF14947.6 gi|150400390|ref|YP_001324157.1| - 0.0025 17.8 1.4 0.0057 16.6 1.4 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix Duffy_binding PF05424.11 gi|150400390|ref|YP_001324157.1| - 0.054 13.5 0.4 0.053 13.6 0.4 1.2 1 0 0 1 1 1 0 Duffy binding domain MarR_2 PF12802.7 gi|150400390|ref|YP_001324157.1| - 0.074 13.0 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 MarR family RTP PF02334.16 gi|150400390|ref|YP_001324157.1| - 0.082 13.6 1.2 0.11 13.1 1.2 1.4 1 1 0 1 1 1 0 Replication terminator protein Replic_Relax PF13814.6 gi|150400390|ref|YP_001324157.1| - 0.1 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation HTH_IclR PF09339.10 gi|150400390|ref|YP_001324157.1| - 0.15 11.9 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF2254 PF10011.9 gi|150400391|ref|YP_001324158.1| - 1.6 7.5 12.2 2.3 6.9 12.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) ParE_toxin PF05016.15 gi|150400392|ref|YP_001324159.1| - 1.3e-06 28.9 0.2 1.6e-06 28.6 0.2 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE ParE-like_toxin PF15781.5 gi|150400392|ref|YP_001324159.1| - 4.6e-06 26.5 0.1 6.4e-06 26.0 0.1 1.2 1 0 0 1 1 1 1 ParE-like toxin of type II bacterial toxin-antitoxin system YafQ_toxin PF15738.5 gi|150400392|ref|YP_001324159.1| - 0.00031 21.0 1.8 0.00062 20.0 1.8 1.5 1 1 0 1 1 1 1 Bacterial toxin of type II toxin-antitoxin system, YafQ DUF2711 PF10924.8 gi|150400392|ref|YP_001324159.1| - 0.058 13.0 0.0 0.061 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2711) hnRNP_Q_AcD PF18360.1 gi|150400392|ref|YP_001324159.1| - 0.13 12.2 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain DUF2683 PF10884.8 gi|150400393|ref|YP_001324160.1| - 2.1e-39 133.7 2.5 2.3e-39 133.5 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) DUF2283 PF10049.9 gi|150400394|ref|YP_001324161.1| - 4e-08 33.3 0.1 8.5e-08 32.3 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2283) PrgU PF09627.10 gi|150400394|ref|YP_001324161.1| - 0.0075 16.2 0.2 0.011 15.7 0.2 1.4 1 0 0 1 1 1 1 PrgU-like protein ACT_5 PF13710.6 gi|150400394|ref|YP_001324161.1| - 0.044 13.6 0.5 0.09 12.6 0.5 1.4 1 0 0 1 1 1 0 ACT domain CobN-Mg_chel PF02514.16 gi|150400395|ref|YP_001324162.1| - 0 1134.6 2.1 0 1125.0 0.5 2.2 2 0 0 2 2 2 2 CobN/Magnesium Chelatase TRM13 PF05206.14 gi|150400395|ref|YP_001324162.1| - 1.3 8.5 4.3 1.3 8.5 2.7 1.7 2 0 0 2 2 2 0 Methyltransferase TRM13 TMEM43 PF07787.12 gi|150400397|ref|YP_001324164.1| - 9 5.6 6.4 9.4 5.5 6.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 FmdE PF02663.14 gi|150400398|ref|YP_001324165.1| - 1.2e-19 70.7 0.0 1.5e-19 70.3 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Amidohydro_3 PF07969.11 gi|150400399|ref|YP_001324166.1| - 1.7e-73 248.7 0.2 2.2e-73 248.3 0.2 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|150400399|ref|YP_001324166.1| - 8e-10 38.5 0.5 4.7e-06 26.2 0.0 2.7 3 0 0 3 3 3 2 Amidohydrolase family GXGXG PF01493.19 gi|150400400|ref|YP_001324167.1| - 2.6e-09 36.9 25.1 8.5e-06 25.5 5.9 3.3 3 1 1 4 4 4 2 GXGXG motif Molydop_binding PF01568.21 gi|150400400|ref|YP_001324167.1| - 2.8e-06 27.3 0.0 4.4e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdopterin PF00384.22 gi|150400401|ref|YP_001324168.1| - 3.4e-13 49.4 0.0 3.5e-11 42.7 0.0 2.1 2 0 0 2 2 2 2 Molybdopterin oxidoreductase TPP_enzyme_M PF00205.22 gi|150400401|ref|YP_001324168.1| - 4.8e-05 23.1 0.0 0.13 12.0 0.0 3.1 3 0 0 3 3 3 2 Thiamine pyrophosphate enzyme, central domain MoeA_N PF03453.17 gi|150400402|ref|YP_001324169.1| - 5.2e-35 120.5 0.0 7.3e-35 120.1 0.0 1.2 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|150400402|ref|YP_001324169.1| - 2.1e-24 85.8 0.1 3.2e-24 85.2 0.1 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|150400402|ref|YP_001324169.1| - 8.3e-07 29.1 0.0 1.9e-06 27.9 0.0 1.7 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) SBP_bac_11 PF13531.6 gi|150400403|ref|YP_001324170.1| - 2.3e-55 187.9 0.0 2.6e-55 187.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|150400403|ref|YP_001324170.1| - 1e-20 75.0 0.3 2.6e-19 70.3 0.3 2.0 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like_2 PF12849.7 gi|150400403|ref|YP_001324170.1| - 9.8e-06 25.4 2.8 4.2e-05 23.4 0.9 2.2 1 1 0 2 2 2 1 PBP superfamily domain SBP_bac_6 PF13343.6 gi|150400403|ref|YP_001324170.1| - 0.00017 21.1 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein NMT1 PF09084.11 gi|150400403|ref|YP_001324170.1| - 0.00018 21.6 0.8 0.001 19.1 0.8 1.8 1 1 1 2 2 2 2 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|150400403|ref|YP_001324170.1| - 0.0015 18.1 0.1 0.024 14.2 0.0 2.1 1 1 1 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_8 PF13416.6 gi|150400403|ref|YP_001324170.1| - 0.0018 18.1 0.3 0.29 10.9 0.0 2.1 1 1 1 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.20 gi|150400403|ref|YP_001324170.1| - 0.013 15.0 0.2 0.024 14.0 0.1 1.6 1 1 1 2 2 2 0 Bacterial extracellular solute-binding proteins, family 3 PBP_like PF12727.7 gi|150400403|ref|YP_001324170.1| - 0.013 14.6 0.0 0.02 14.0 0.0 1.5 1 1 0 1 1 1 0 PBP superfamily domain BPD_transp_1 PF00528.22 gi|150400404|ref|YP_001324171.1| - 1.1e-21 77.4 16.4 1.1e-21 77.4 16.4 1.2 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component TetR_N PF00440.23 gi|150400405|ref|YP_001324172.1| - 1.6e-14 53.4 0.0 2.8e-14 52.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_WhiA PF02650.14 gi|150400405|ref|YP_001324172.1| - 0.0035 17.6 0.0 0.01 16.2 0.0 1.8 1 0 0 1 1 1 1 WhiA C-terminal HTH domain HTH_Tnp_1_2 PF13022.6 gi|150400405|ref|YP_001324172.1| - 0.0042 17.2 0.9 0.0078 16.4 0.9 1.5 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase UPF0122 PF04297.14 gi|150400405|ref|YP_001324172.1| - 0.0074 16.5 2.5 0.014 15.6 1.1 2.3 2 1 0 2 2 2 1 Putative helix-turn-helix protein, YlxM / p13 like MMPL PF03176.15 gi|150400406|ref|YP_001324173.1| - 1.5e-32 112.8 6.9 2.1e-32 112.4 6.9 1.4 1 0 0 1 1 1 1 MMPL family SecD_SecF PF02355.16 gi|150400406|ref|YP_001324173.1| - 1.6e-08 34.1 8.5 1.6e-08 34.1 8.5 1.7 2 0 0 2 2 2 1 Protein export membrane protein Patched PF02460.18 gi|150400406|ref|YP_001324173.1| - 4e-08 31.8 4.4 5.7e-08 31.3 4.4 1.2 1 0 0 1 1 1 1 Patched family ACR_tran PF00873.19 gi|150400406|ref|YP_001324173.1| - 1.8e-05 22.6 8.7 2.5e-05 22.2 8.7 1.2 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family NPCBM_assoc PF10633.9 gi|150400407|ref|YP_001324174.1| - 2.8e-15 56.3 0.0 0.0082 16.4 0.0 5.8 4 3 0 4 4 4 4 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|150400407|ref|YP_001324174.1| - 1.4e-07 31.7 19.3 0.007 16.6 3.2 5.5 4 1 0 5 5 5 3 CARDB AP3B1_C PF14796.6 gi|150400407|ref|YP_001324174.1| - 0.0015 18.8 0.5 0.12 12.6 0.0 3.2 3 0 0 3 3 3 1 Clathrin-adaptor complex-3 beta-1 subunit C-terminal Arrestin_C PF02752.22 gi|150400407|ref|YP_001324174.1| - 0.0017 18.8 4.1 0.19 12.2 0.0 4.0 2 1 1 3 3 3 1 Arrestin (or S-antigen), C-terminal domain DUF11 PF01345.18 gi|150400407|ref|YP_001324174.1| - 0.002 18.4 3.9 14 6.1 0.0 4.7 4 3 0 4 4 4 1 Domain of unknown function DUF11 DUF4448 PF14610.6 gi|150400407|ref|YP_001324174.1| - 0.026 14.3 5.4 0.44 10.3 2.9 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4448) N_BRCA1_IG PF16158.5 gi|150400407|ref|YP_001324174.1| - 0.063 14.0 0.1 26 5.6 0.0 3.1 3 0 0 3 3 3 0 Ig-like domain from next to BRCA1 gene Cupredoxin_1 PF13473.6 gi|150400407|ref|YP_001324174.1| - 1 9.5 3.5 21 5.3 0.1 3.7 4 0 0 4 4 4 0 Cupredoxin-like domain DUF5001 PF16392.5 gi|150400407|ref|YP_001324174.1| - 1.8 8.6 5.1 19 5.3 0.2 4.3 4 0 0 4 4 4 0 Ig-like domain AI-2E_transport PF01594.16 gi|150400408|ref|YP_001324175.1| - 2.4e-52 178.1 35.4 3.3e-52 177.7 35.4 1.1 1 0 0 1 1 1 1 AI-2E family transporter TMPIT PF07851.13 gi|150400408|ref|YP_001324175.1| - 0.33 10.1 2.9 4.5 6.4 0.1 2.4 1 1 1 2 2 2 0 TMPIT-like protein DUF4013 PF13197.6 gi|150400409|ref|YP_001324176.1| - 1.4e-16 60.8 24.3 1.4e-16 60.8 24.3 3.2 1 1 2 3 3 3 2 Protein of unknown function (DUF4013) Phage_holin_3_6 PF07332.11 gi|150400409|ref|YP_001324176.1| - 0.2 11.7 0.0 0.2 11.7 0.0 3.3 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III Lactamase_B PF00753.27 gi|150400410|ref|YP_001324177.1| - 3.8e-18 66.2 0.1 1e-12 48.5 0.1 2.1 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|150400410|ref|YP_001324177.1| - 0.0054 16.3 0.0 0.0081 15.7 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF1189 PF06691.11 gi|150400410|ref|YP_001324177.1| - 0.012 15.2 2.2 0.018 14.6 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) Lactamase_B_3 PF13483.6 gi|150400410|ref|YP_001324177.1| - 0.042 13.7 0.2 0.058 13.3 0.2 1.2 1 0 0 1 1 1 0 Beta-lactamase superfamily domain LAL_C2 PF18603.1 gi|150400411|ref|YP_001324178.1| - 0.058 13.6 0.0 0.072 13.3 0.0 1.2 1 0 0 1 1 1 0 L-amino acid ligase C-terminal domain 2 DUF3159 PF11361.8 gi|150400412|ref|YP_001324179.1| - 0.0054 16.5 0.8 0.0066 16.2 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3159) TssN PF17555.2 gi|150400412|ref|YP_001324179.1| - 2.1 7.7 18.3 2.5 7.4 18.3 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN MacB_PCD PF12704.7 gi|150400413|ref|YP_001324180.1| - 1.8e-26 93.7 1.3 1.8e-26 93.7 1.3 2.8 3 0 0 3 3 3 2 MacB-like periplasmic core domain FtsX PF02687.21 gi|150400413|ref|YP_001324180.1| - 5.4e-18 65.3 22.5 7.1e-18 64.9 9.7 3.3 3 0 0 3 3 3 2 FtsX-like permease family NPCBM_assoc PF10633.9 gi|150400414|ref|YP_001324181.1| - 2.5e-11 43.7 0.1 0.018 15.3 0.0 5.1 5 0 0 5 5 5 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|150400414|ref|YP_001324181.1| - 7.2e-06 26.2 14.7 0.077 13.3 3.4 4.0 4 0 0 4 4 4 3 CARDB DUF11 PF01345.18 gi|150400414|ref|YP_001324181.1| - 0.00094 19.4 1.6 0.016 15.5 0.3 3.2 3 1 0 3 3 3 1 Domain of unknown function DUF11 DUF5001 PF16392.5 gi|150400414|ref|YP_001324181.1| - 0.02 14.8 0.1 0.066 13.1 0.1 1.9 1 0 0 1 1 1 0 Ig-like domain DUF1573 PF07610.11 gi|150400414|ref|YP_001324181.1| - 0.033 14.2 2.2 0.31 11.1 0.1 3.6 4 1 0 4 4 4 0 Protein of unknown function (DUF1573) Y_Y_Y PF07495.13 gi|150400414|ref|YP_001324181.1| - 0.04 13.9 4.8 8.7 6.4 0.2 4.3 4 0 0 4 4 4 0 Y_Y_Y domain Big_1 PF02369.16 gi|150400414|ref|YP_001324181.1| - 0.049 13.6 0.1 0.22 11.5 0.1 2.2 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) Alpha_adaptinC2 PF02883.20 gi|150400414|ref|YP_001324181.1| - 0.11 12.8 0.4 0.83 10.0 0.2 2.3 3 0 0 3 3 3 0 Adaptin C-terminal domain DUF2861 PF11060.8 gi|150400414|ref|YP_001324181.1| - 0.17 11.5 0.1 0.3 10.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2861) ABC_tran PF00005.27 gi|150400415|ref|YP_001324182.1| - 3.8e-36 124.6 0.1 6.9e-36 123.8 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|150400415|ref|YP_001324182.1| - 2.9e-07 30.1 0.2 6e-07 29.1 0.2 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|150400415|ref|YP_001324182.1| - 0.00011 22.2 0.2 0.045 13.5 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|150400415|ref|YP_001324182.1| - 0.00013 21.6 0.1 0.00025 20.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain G-alpha PF00503.20 gi|150400415|ref|YP_001324182.1| - 0.00041 19.6 0.1 0.00051 19.3 0.1 1.1 1 0 0 1 1 1 1 G-protein alpha subunit AAA_15 PF13175.6 gi|150400415|ref|YP_001324182.1| - 0.0005 19.9 1.7 0.027 14.2 0.5 2.4 1 1 1 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|150400415|ref|YP_001324182.1| - 0.0014 18.6 0.1 0.0024 17.8 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase NTPase_1 PF03266.15 gi|150400415|ref|YP_001324182.1| - 0.0043 17.0 0.1 0.58 10.0 0.0 2.3 2 0 0 2 2 2 1 NTPase AAA_24 PF13479.6 gi|150400415|ref|YP_001324182.1| - 0.007 16.1 0.2 0.7 9.6 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|150400415|ref|YP_001324182.1| - 0.0097 16.2 0.2 0.034 14.4 0.2 1.9 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|150400415|ref|YP_001324182.1| - 0.016 15.3 0.9 0.038 14.1 0.9 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF87 PF01935.17 gi|150400415|ref|YP_001324182.1| - 0.025 14.7 0.4 0.078 13.1 0.1 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_16 PF13191.6 gi|150400415|ref|YP_001324182.1| - 0.029 14.8 0.0 0.053 13.9 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain PRK PF00485.18 gi|150400415|ref|YP_001324182.1| - 0.037 13.8 0.9 0.22 11.2 1.0 2.0 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family RNA_helicase PF00910.22 gi|150400415|ref|YP_001324182.1| - 0.038 14.4 0.1 0.1 13.0 0.1 1.7 1 0 0 1 1 1 0 RNA helicase AAA_23 PF13476.6 gi|150400415|ref|YP_001324182.1| - 0.054 14.0 2.3 0.074 13.5 0.0 2.1 2 1 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|150400415|ref|YP_001324182.1| - 0.056 12.6 0.2 0.13 11.4 0.2 1.6 1 0 0 1 1 1 0 NB-ARC domain FtsK_SpoIIIE PF01580.18 gi|150400415|ref|YP_001324182.1| - 0.067 12.5 0.1 0.11 11.8 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 gi|150400415|ref|YP_001324182.1| - 0.088 12.5 0.0 1.3 8.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.6 gi|150400415|ref|YP_001324182.1| - 0.093 12.4 0.0 0.22 11.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF5633 PF18656.1 gi|150400415|ref|YP_001324182.1| - 0.093 12.6 0.8 0.18 11.7 0.8 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5633) SH3_2 PF07653.17 gi|150400415|ref|YP_001324182.1| - 0.12 12.1 0.0 4.3 7.1 0.0 2.4 2 0 0 2 2 2 0 Variant SH3 domain HTH_24 PF13412.6 gi|150400418|ref|YP_001324185.1| - 3.2e-07 29.8 0.5 1.4e-06 27.7 0.2 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|150400418|ref|YP_001324185.1| - 7e-07 29.0 0.0 2.4e-06 27.3 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|150400418|ref|YP_001324185.1| - 4.1e-06 26.6 0.2 1.2e-05 25.1 0.2 1.8 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|150400418|ref|YP_001324185.1| - 6.4e-05 22.8 0.0 0.00011 22.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|150400418|ref|YP_001324185.1| - 0.00025 20.8 0.0 0.00063 19.6 0.0 1.7 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|150400418|ref|YP_001324185.1| - 0.00041 20.1 0.1 0.00079 19.2 0.1 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain Sulfolobus_pRN PF05584.11 gi|150400418|ref|YP_001324185.1| - 0.00072 19.5 0.2 0.0018 18.3 0.2 1.6 1 0 0 1 1 1 1 Sulfolobus plasmid regulatory protein HTH_Crp_2 PF13545.6 gi|150400418|ref|YP_001324185.1| - 0.0012 18.8 0.2 0.013 15.4 0.1 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain DprA_WH PF17782.1 gi|150400418|ref|YP_001324185.1| - 0.003 17.6 0.0 0.0046 17.0 0.0 1.3 1 0 0 1 1 1 1 DprA winged helix domain TFIIE_alpha PF02002.17 gi|150400418|ref|YP_001324185.1| - 0.0056 16.5 0.9 0.011 15.6 0.2 1.8 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_9 PF08221.11 gi|150400418|ref|YP_001324185.1| - 0.012 15.7 0.1 0.038 14.1 0.1 1.8 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_11 PF08279.12 gi|150400418|ref|YP_001324185.1| - 0.019 14.9 2.4 0.18 11.8 0.1 3.3 4 0 0 4 4 4 0 HTH domain HTH_DeoR PF08220.12 gi|150400418|ref|YP_001324185.1| - 0.039 13.7 1.4 0.087 12.6 0.2 2.1 3 0 0 3 3 3 0 DeoR-like helix-turn-helix domain HTH_36 PF13730.6 gi|150400418|ref|YP_001324185.1| - 0.051 13.5 0.2 0.26 11.3 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_39 PF14090.6 gi|150400418|ref|YP_001324185.1| - 0.056 13.2 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|150400418|ref|YP_001324185.1| - 0.071 13.2 0.1 0.21 11.7 0.0 1.8 2 0 0 2 2 1 0 Helix-turn-helix HTH_26 PF13443.6 gi|150400418|ref|YP_001324185.1| - 0.085 13.3 0.2 0.35 11.3 0.1 2.0 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Met_10 PF02475.16 gi|150400418|ref|YP_001324185.1| - 0.11 12.2 1.0 0.18 11.5 1.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein DHHC PF01529.20 gi|150400418|ref|YP_001324185.1| - 0.17 12.0 3.4 0.33 11.0 3.4 1.4 1 0 0 1 1 1 0 DHHC palmitoyltransferase HxlR PF01638.17 gi|150400418|ref|YP_001324185.1| - 0.21 11.5 2.3 0.27 11.1 0.2 2.3 3 0 0 3 3 3 0 HxlR-like helix-turn-helix DUF848 PF05852.11 gi|150400418|ref|YP_001324185.1| - 0.23 11.6 2.9 0.31 11.1 2.9 1.2 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Class_IIIsignal PF04021.12 gi|150400419|ref|YP_001324186.1| - 1.6e-07 31.0 1.6 2.1e-07 30.7 1.6 1.2 1 0 0 1 1 1 1 Class III signal peptide SBF PF01758.16 gi|150400420|ref|YP_001324187.1| - 2.1e-44 151.5 15.5 2.1e-44 151.5 15.5 1.7 2 0 0 2 2 2 1 Sodium Bile acid symporter family SBF_like PF13593.6 gi|150400420|ref|YP_001324187.1| - 2.2e-10 40.3 21.3 5.6e-10 39.0 21.3 1.6 1 1 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) Thioredoxin_3 PF13192.6 gi|150400421|ref|YP_001324188.1| - 1e-22 80.0 3.1 1.1e-22 79.8 3.1 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|150400421|ref|YP_001324188.1| - 0.27 11.5 2.9 0.3 11.3 1.7 1.8 1 1 0 2 2 2 0 Glutaredoxin LMWPc PF01451.21 gi|150400422|ref|YP_001324189.1| - 1.1e-14 55.1 0.1 2.2e-14 54.0 0.1 1.5 1 1 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase Ssu72 PF04722.13 gi|150400422|ref|YP_001324189.1| - 0.069 12.7 0.8 0.74 9.3 0.1 2.1 1 1 1 2 2 2 0 Ssu72-like protein Sulfate_transp PF00916.20 gi|150400423|ref|YP_001324190.1| - 3.1e-83 279.6 33.3 3.1e-83 279.6 33.3 1.6 1 1 0 1 1 1 1 Sulfate permease family STAS PF01740.21 gi|150400423|ref|YP_001324190.1| - 1.3e-18 66.8 0.1 2.4e-18 65.9 0.1 1.4 1 0 0 1 1 1 1 STAS domain MFS_MOT1 PF16983.5 gi|150400423|ref|YP_001324190.1| - 3 8.3 36.6 0.027 14.8 7.5 3.6 3 1 0 4 4 4 0 Molybdate transporter of MFS superfamily Polbeta PF18765.1 gi|150400424|ref|YP_001324191.1| - 6.5e-09 35.8 0.5 6.5e-09 35.8 0.5 2.1 2 0 0 2 2 2 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|150400424|ref|YP_001324191.1| - 3.7e-07 30.4 1.0 6.6e-07 29.5 0.1 1.9 2 1 1 3 3 3 1 Nucleotidyltransferase domain HTH_34 PF13601.6 gi|150400424|ref|YP_001324191.1| - 0.0023 18.0 0.7 0.0043 17.2 0.7 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|150400424|ref|YP_001324191.1| - 0.0068 16.3 0.3 0.06 13.2 0.3 2.1 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|150400424|ref|YP_001324191.1| - 0.01 15.7 0.2 0.024 14.5 0.2 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF1796 PF08795.10 gi|150400424|ref|YP_001324191.1| - 0.02 14.8 2.2 0.18 11.7 2.0 2.0 1 1 1 2 2 2 0 Putative papain-like cysteine peptidase (DUF1796) HTH_20 PF12840.7 gi|150400424|ref|YP_001324191.1| - 0.19 11.8 0.0 0.33 11.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|150400424|ref|YP_001324191.1| - 0.2 11.5 0.0 0.39 10.6 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HEPN PF05168.14 gi|150400425|ref|YP_001324192.1| - 2.2e-06 27.8 1.0 3.6e-06 27.1 1.0 1.3 1 0 0 1 1 1 1 HEPN domain Sec6 PF06046.13 gi|150400425|ref|YP_001324192.1| - 0.0002 19.9 3.2 0.00022 19.8 3.2 1.1 1 0 0 1 1 1 1 Exocyst complex component Sec6 MS_channel PF00924.18 gi|150400426|ref|YP_001324193.1| - 5.3e-55 186.2 3.7 9.9e-55 185.3 3.7 1.4 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF432 PF04254.13 gi|150400427|ref|YP_001324194.1| - 1.1e-25 90.2 0.0 1.9e-25 89.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF432) DUF123 PF01986.16 gi|150400428|ref|YP_001324195.1| - 4.9e-25 87.9 0.1 1.4e-24 86.4 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function DUF123 HhH-GPD PF00730.25 gi|150400428|ref|YP_001324195.1| - 1.4e-21 76.9 0.0 2.4e-21 76.2 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|150400428|ref|YP_001324195.1| - 9.3e-10 37.9 0.0 3.2e-09 36.2 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|150400428|ref|YP_001324195.1| - 0.0093 16.6 0.0 0.12 13.0 0.0 2.3 1 1 1 2 2 2 1 Helix-hairpin-helix domain DUF2025 PF09634.10 gi|150400428|ref|YP_001324195.1| - 0.011 15.7 0.0 0.026 14.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2025) GIY-YIG PF01541.24 gi|150400428|ref|YP_001324195.1| - 0.014 15.6 0.9 0.014 15.6 0.9 2.4 2 1 0 2 2 2 0 GIY-YIG catalytic domain DUF3189 PF11385.8 gi|150400428|ref|YP_001324195.1| - 0.075 12.9 0.0 0.32 10.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3189) GxGYxYP_N PF16216.5 gi|150400428|ref|YP_001324195.1| - 0.087 13.0 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 GxGYxY sequence motif in domain of unknown function N-terminal Iso_dh PF00180.20 gi|150400430|ref|YP_001324197.1| - 9.7e-101 337.4 1.3 1.1e-100 337.1 1.3 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Gate PF07670.14 gi|150400430|ref|YP_001324197.1| - 0.041 14.2 0.0 0.078 13.3 0.0 1.4 1 0 0 1 1 1 0 Nucleoside recognition SAICAR_synt PF01259.18 gi|150400431|ref|YP_001324198.1| - 3.1e-61 207.2 0.5 3.7e-61 206.9 0.5 1.1 1 0 0 1 1 1 1 SAICAR synthetase HAD PF12710.7 gi|150400432|ref|YP_001324199.1| - 1.1e-18 68.4 0.0 1.3e-18 68.1 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|150400432|ref|YP_001324199.1| - 4.5e-17 63.0 0.3 5.6e-17 62.7 0.3 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|150400432|ref|YP_001324199.1| - 4e-11 43.1 0.4 4e-11 43.1 0.4 2.4 1 1 2 3 3 3 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|150400432|ref|YP_001324199.1| - 1.2e-07 31.4 0.2 0.00036 20.0 0.0 2.1 2 0 0 2 2 2 2 Putative Phosphatase HAD_2 PF13419.6 gi|150400432|ref|YP_001324199.1| - 2.4e-07 31.0 4.8 1.9e-05 24.8 4.8 2.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|150400432|ref|YP_001324199.1| - 7.2e-05 22.4 0.1 0.0014 18.2 0.0 2.1 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase Hydrolase_like PF13242.6 gi|150400432|ref|YP_001324199.1| - 0.086 12.9 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 HAD-hyrolase-like Acid_PPase PF12689.7 gi|150400432|ref|YP_001324199.1| - 0.13 12.1 0.0 0.26 11.1 0.0 1.8 1 1 0 1 1 1 0 Acid Phosphatase Arg_decarbox_C PF17944.1 gi|150400433|ref|YP_001324200.1| - 0.015 15.9 4.5 2.4 8.8 0.1 3.6 2 1 1 3 3 3 0 Arginine decarboxylase C-terminal helical extension YtxH PF12732.7 gi|150400433|ref|YP_001324200.1| - 0.018 15.6 20.2 0.094 13.3 1.7 3.9 1 1 1 2 2 2 0 YtxH-like protein Tup_N PF08581.10 gi|150400433|ref|YP_001324200.1| - 0.023 15.0 8.2 0.023 15.0 8.2 4.0 1 1 3 4 4 4 0 Tup N-terminal LPP PF04728.13 gi|150400433|ref|YP_001324200.1| - 0.052 13.9 1.1 0.052 13.9 1.1 4.5 2 1 3 5 5 5 0 Lipoprotein leucine-zipper FAM167 PF11652.8 gi|150400433|ref|YP_001324200.1| - 0.082 13.4 0.7 0.082 13.4 0.7 3.4 1 1 3 4 4 4 0 FAM167 Lebercilin PF15619.6 gi|150400433|ref|YP_001324200.1| - 0.087 12.5 31.8 0.083 12.5 31.0 1.3 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease Syntaxin_2 PF14523.6 gi|150400433|ref|YP_001324200.1| - 0.31 11.4 28.0 3.8 7.9 12.6 3.2 1 1 1 2 2 2 0 Syntaxin-like protein ORF11CD3 PF10549.9 gi|150400433|ref|YP_001324200.1| - 0.37 11.0 0.2 0.37 11.0 0.2 2.9 3 1 0 3 3 3 0 ORF11CD3 domain ArgoMid PF16487.5 gi|150400433|ref|YP_001324200.1| - 0.79 10.0 4.9 11 6.4 0.3 2.7 2 0 0 2 2 2 0 Mid domain of argonaute FH2 PF02181.23 gi|150400433|ref|YP_001324200.1| - 0.9 8.6 22.9 0.53 9.4 5.0 2.1 1 1 0 2 2 2 0 Formin Homology 2 Domain ATG16 PF08614.11 gi|150400433|ref|YP_001324200.1| - 0.97 9.6 25.1 2.1 8.5 13.2 2.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Seryl_tRNA_N PF02403.22 gi|150400433|ref|YP_001324200.1| - 1.3 9.3 32.9 0.14 12.4 13.1 3.5 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain KxDL PF10241.9 gi|150400433|ref|YP_001324200.1| - 1.4 9.2 21.3 1.1 9.6 5.1 4.1 1 1 2 3 3 3 0 Uncharacterized conserved protein YkyA PF10368.9 gi|150400433|ref|YP_001324200.1| - 1.5 8.4 41.9 0.17 11.6 3.4 3.0 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein DUF883 PF05957.13 gi|150400433|ref|YP_001324200.1| - 1.5 9.4 12.7 0.48 11.1 2.3 3.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF3106 PF11304.8 gi|150400433|ref|YP_001324200.1| - 1.6 9.3 13.3 60 4.2 6.6 3.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3106) DUF3008 PF11450.8 gi|150400433|ref|YP_001324200.1| - 2.5 8.3 8.3 1.3 9.2 2.4 3.0 3 0 0 3 3 3 0 Protein of unknwon function (DUF3008) T3SSipB PF16535.5 gi|150400433|ref|YP_001324200.1| - 2.6 8.5 17.3 0.17 12.4 8.8 2.1 1 1 1 2 2 2 0 Type III cell invasion protein SipB YabA PF06156.13 gi|150400433|ref|YP_001324200.1| - 2.8 8.6 29.2 2.2 9.0 9.0 3.9 1 1 3 4 4 4 0 Initiation control protein YabA MtrB PF05440.12 gi|150400433|ref|YP_001324200.1| - 5.3 7.5 7.1 8.8 6.8 0.2 3.5 2 1 3 5 5 5 0 Tetrahydromethanopterin S-methyltransferase subunit B Mod_r PF07200.13 gi|150400433|ref|YP_001324200.1| - 8.8 6.4 31.9 3.6 7.7 10.0 3.0 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein DUF98 PF01947.16 gi|150400434|ref|YP_001324201.1| - 4.5e-20 72.1 0.5 1.5e-16 60.7 0.1 2.1 1 1 1 2 2 2 2 p-hydroxybenzoic acid synthase PdaC PF13739.6 gi|150400434|ref|YP_001324201.1| - 0.12 13.4 0.2 0.23 12.5 0.2 1.5 1 0 0 1 1 1 0 Deacetylase PdaC Radical_SAM PF04055.21 gi|150400435|ref|YP_001324202.1| - 7.3e-18 65.5 0.3 1.8e-17 64.2 0.2 1.7 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|150400435|ref|YP_001324202.1| - 8.7e-05 22.8 0.8 0.00018 21.8 0.1 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain zf-ribbon_3 PF13248.6 gi|150400435|ref|YP_001324202.1| - 0.0073 15.7 8.9 0.26 10.7 0.1 3.0 3 0 0 3 3 3 2 zinc-ribbon domain DZR PF12773.7 gi|150400435|ref|YP_001324202.1| - 0.0094 16.0 0.5 0.0094 16.0 0.5 2.7 3 0 0 3 3 3 1 Double zinc ribbon DNA_ligase_ZBD PF03119.16 gi|150400435|ref|YP_001324202.1| - 0.1 12.7 0.8 13 5.9 0.2 2.5 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain TF_Zn_Ribbon PF08271.12 gi|150400435|ref|YP_001324202.1| - 0.11 12.1 2.1 2.4 7.7 0.1 2.7 2 0 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|150400435|ref|YP_001324202.1| - 0.28 11.0 0.2 0.28 11.0 0.2 3.4 3 0 0 3 3 3 0 zinc-ribbon domain zf-C4_Topoisom PF01396.19 gi|150400435|ref|YP_001324202.1| - 0.84 9.5 8.3 1.4 8.8 0.0 2.9 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf_C2H2_10 PF18414.1 gi|150400435|ref|YP_001324202.1| - 2.1 8.0 4.7 9.5 5.9 1.1 2.8 2 0 0 2 2 2 0 C2H2 type zinc-finger Nudix_N_2 PF14803.6 gi|150400435|ref|YP_001324202.1| - 5.1 7.1 8.9 4.7 7.2 0.1 3.0 3 0 0 3 3 2 0 Nudix N-terminal DUF1610 PF07754.11 gi|150400435|ref|YP_001324202.1| - 6.9 6.7 15.0 1.4 9.0 2.5 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) PBP_like PF12727.7 gi|150400436|ref|YP_001324203.1| - 2.5e-54 183.3 0.0 4.4e-54 182.5 0.0 1.3 1 0 0 1 1 1 1 PBP superfamily domain MoeA_N PF03453.17 gi|150400436|ref|YP_001324203.1| - 9.4e-41 139.2 0.0 1.5e-40 138.5 0.0 1.3 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|150400436|ref|YP_001324203.1| - 1.9e-24 86.0 0.0 3.8e-24 85.0 0.0 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|150400436|ref|YP_001324203.1| - 1.4e-13 50.8 0.0 2.6e-13 50.0 0.0 1.5 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) AMMECR1 PF01871.17 gi|150400437|ref|YP_001324204.1| - 2.7e-49 167.0 0.0 3.2e-49 166.8 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 DHHA1 PF02272.19 gi|150400438|ref|YP_001324205.1| - 7.9e-15 55.5 0.5 1.7e-14 54.4 0.1 1.9 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|150400438|ref|YP_001324205.1| - 0.0023 18.1 0.0 0.006 16.8 0.0 1.7 2 0 0 2 2 2 1 DHH family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanococcus_vannielii_SB_uid58767/NC_009634.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanococcus_vannielii_SB_uid58767/NC_009634.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanococcus_vannielii_SB_uid58767/NC_009634.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanococcus_vannielii_SB_uid58767/NC_009634.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 15:56:30 2019 # [ok]