# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L3 PF00297.22 gi|91772083|ref|YP_564775.1| - 3.4e-86 289.5 0.2 4.3e-86 289.2 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L3 Cass2 PF14526.6 gi|91772083|ref|YP_564775.1| - 0.027 14.6 0.0 0.042 14.0 0.0 1.3 1 0 0 1 1 1 0 Integron-associated effector binding protein Ribosomal_L4 PF00573.22 gi|91772084|ref|YP_564776.1| - 2.9e-47 160.8 0.8 3.3e-47 160.7 0.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.20 gi|91772085|ref|YP_564777.1| - 1e-14 54.6 2.1 5.2e-14 52.4 2.1 1.8 1 1 0 1 1 1 1 Ribosomal protein L23 Pox_polyA_pol_C PF12629.7 gi|91772085|ref|YP_564777.1| - 0.0048 16.7 0.1 0.0056 16.5 0.1 1.1 1 0 0 1 1 1 1 Poxvirus poly(A) polymerase C-terminal domain Asp_protease_2 PF13650.6 gi|91772085|ref|YP_564777.1| - 0.05 14.2 0.1 0.056 14.1 0.1 1.2 1 0 0 1 1 1 0 Aspartyl protease Ribosomal_L2_C PF03947.18 gi|91772086|ref|YP_564778.1| - 5.9e-45 152.5 0.4 9.8e-45 151.8 0.4 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|91772086|ref|YP_564778.1| - 1e-16 60.6 0.0 2.5e-16 59.4 0.0 1.7 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.21 gi|91772087|ref|YP_564779.1| - 4.5e-26 90.5 0.3 6.4e-26 90.1 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 Citrate_synt PF00285.21 gi|91772087|ref|YP_564779.1| - 0.066 12.3 0.0 0.07 12.2 0.0 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain Ribosomal_L22 PF00237.19 gi|91772088|ref|YP_564780.1| - 1.3e-29 102.4 0.1 1.6e-29 102.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e PNP_UDP_1 PF01048.20 gi|91772088|ref|YP_564780.1| - 0.045 13.0 0.0 0.055 12.7 0.0 1.1 1 0 0 1 1 1 0 Phosphorylase superfamily Ribosomal_S3_C PF00189.20 gi|91772089|ref|YP_564781.1| - 7e-22 77.8 1.6 1.1e-21 77.2 0.2 2.0 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|91772089|ref|YP_564781.1| - 3.8e-15 55.5 0.0 1.2e-14 53.9 0.0 1.9 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|91772089|ref|YP_564781.1| - 0.14 12.0 2.1 0.47 10.3 0.0 2.8 4 0 0 4 4 4 0 KH domain KH_4 PF13083.6 gi|91772089|ref|YP_564781.1| - 0.57 10.1 0.1 0.57 10.1 0.1 2.3 2 1 0 2 2 2 0 KH domain Ribosomal_L29 PF00831.23 gi|91772090|ref|YP_564782.1| - 8.5e-15 54.5 0.1 1.1e-14 54.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein UPF0086 PF01868.16 gi|91772091|ref|YP_564783.1| - 8.3e-24 83.3 0.0 9.3e-24 83.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_S17 PF00366.20 gi|91772092|ref|YP_564784.1| - 4.6e-29 100.3 2.8 5.6e-29 100.1 2.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Atg14 PF10186.9 gi|91772092|ref|YP_564784.1| - 0.048 12.7 0.1 0.057 12.5 0.1 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Ribosomal_S17_N PF16205.5 gi|91772092|ref|YP_564784.1| - 0.079 13.3 0.5 0.24 11.8 0.0 2.0 2 0 0 2 2 2 0 Ribosomal_S17 N-terminal Ribosomal_L14 PF00238.19 gi|91772093|ref|YP_564785.1| - 6.2e-37 126.4 1.7 6.9e-37 126.2 1.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_L26 PF16906.5 gi|91772094|ref|YP_564786.1| - 7.8e-29 100.0 0.1 9.2e-29 99.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|91772094|ref|YP_564786.1| - 2.1e-05 24.3 1.3 6.3e-05 22.8 1.3 1.9 1 0 0 1 1 1 1 KOW motif Ribosomal_S4e PF00900.20 gi|91772095|ref|YP_564787.1| - 7e-18 64.3 0.4 1.5e-17 63.2 0.4 1.6 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.12 gi|91772095|ref|YP_564787.1| - 3e-10 40.0 1.5 6.1e-10 39.0 1.5 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 gi|91772095|ref|YP_564787.1| - 1.1e-08 34.6 1.2 5.8e-08 32.3 0.2 2.5 2 0 0 2 2 2 1 S4 domain KOW PF00467.29 gi|91772095|ref|YP_564787.1| - 2.3e-05 24.1 0.1 7.4e-05 22.6 0.1 1.9 1 0 0 1 1 1 1 KOW motif S4_2 PF13275.6 gi|91772095|ref|YP_564787.1| - 0.0049 16.6 0.0 0.019 14.8 0.0 2.1 2 0 0 2 2 2 1 S4 domain Ribosomal_L5_C PF00673.21 gi|91772096|ref|YP_564788.1| - 2.9e-25 88.3 0.0 3.9e-25 87.8 0.0 1.2 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|91772096|ref|YP_564788.1| - 7.2e-19 67.9 0.0 1.4e-18 66.9 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 gi|91772097|ref|YP_564789.1| - 2.5e-16 59.2 2.7 2.5e-16 59.1 2.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-P11 PF03854.14 gi|91772097|ref|YP_564789.1| - 0.0029 17.2 1.4 0.0036 16.9 1.4 1.1 1 0 0 1 1 1 1 P-11 zinc finger DUF4428 PF14471.6 gi|91772097|ref|YP_564789.1| - 0.015 15.2 0.3 0.018 14.9 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) MRNIP PF15749.5 gi|91772097|ref|YP_564789.1| - 0.053 14.3 0.6 0.053 14.3 0.6 1.1 1 0 0 1 1 1 0 MRN-interacting protein DUF1451 PF07295.11 gi|91772097|ref|YP_564789.1| - 0.089 12.8 0.5 0.097 12.7 0.5 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Ribosomal_S8 PF00410.19 gi|91772098|ref|YP_564790.1| - 3.8e-27 94.7 0.0 5.3e-27 94.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.23 gi|91772099|ref|YP_564791.1| - 5.2e-28 97.5 7.0 5.8e-16 58.9 0.4 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Ribosomal_L32e PF01655.18 gi|91772100|ref|YP_564792.1| - 4e-34 117.3 0.0 5.1e-34 116.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 DXP_reductoisom PF02670.16 gi|91772100|ref|YP_564792.1| - 0.068 13.9 0.2 0.12 13.1 0.1 1.4 1 1 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Ribosomal_L19e PF01280.20 gi|91772101|ref|YP_564793.1| - 1.6e-56 190.4 8.0 1.9e-56 190.2 8.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Ribosomal_L5e PF17144.4 gi|91772102|ref|YP_564794.1| - 4.6e-30 104.8 2.1 9e-20 71.3 0.8 2.3 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18p PF00861.22 gi|91772102|ref|YP_564794.1| - 1.3e-05 25.5 0.0 2e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Lipoprotein_16 PF03923.13 gi|91772102|ref|YP_564794.1| - 0.015 15.0 0.0 0.024 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized lipoprotein Ribosomal_S5_C PF03719.15 gi|91772103|ref|YP_564795.1| - 8.9e-24 82.7 0.6 1.6e-23 81.9 0.6 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_S5 PF00333.20 gi|91772103|ref|YP_564795.1| - 1.4e-23 82.6 0.7 3.1e-23 81.5 0.7 1.6 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_L30 PF00327.20 gi|91772104|ref|YP_564796.1| - 1.4e-14 53.7 0.1 2.3e-14 53.0 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L27A PF00828.19 gi|91772105|ref|YP_564797.1| - 6.3e-21 75.4 0.3 8.1e-21 75.0 0.3 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 gi|91772105|ref|YP_564797.1| - 0.016 14.6 0.1 0.026 13.9 0.1 1.4 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e FoP_duplication PF13865.6 gi|91772105|ref|YP_564797.1| - 5.7 7.6 10.0 9.5 6.9 10.0 1.3 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 SecY PF00344.20 gi|91772106|ref|YP_564798.1| - 4e-64 216.8 25.5 4.8e-64 216.5 25.5 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|91772106|ref|YP_564798.1| - 5.5e-12 45.3 1.0 5.5e-12 45.3 1.0 2.0 2 0 0 2 2 2 1 Plug domain of Sec61p ADK PF00406.22 gi|91772107|ref|YP_564799.1| - 3.6e-56 189.5 0.0 4.3e-56 189.2 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 gi|91772107|ref|YP_564799.1| - 5e-28 98.2 0.0 1.4e-27 96.8 0.0 1.6 2 0 0 2 2 2 1 AAA domain ADK_lid PF05191.14 gi|91772107|ref|YP_564799.1| - 1.6e-15 56.7 3.7 1.9e-15 56.5 2.6 1.7 2 0 0 2 2 2 1 Adenylate kinase, active site lid Hydin_ADK PF17213.3 gi|91772107|ref|YP_564799.1| - 1.6e-05 25.2 0.0 0.19 12.0 0.0 2.2 1 1 1 2 2 2 2 Hydin Adenylate kinase-like domain AAA_18 PF13238.6 gi|91772107|ref|YP_564799.1| - 0.00052 20.6 0.0 0.001 19.6 0.0 1.7 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|91772107|ref|YP_564799.1| - 0.012 15.3 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 0 Cytidylate kinase AAA_33 PF13671.6 gi|91772107|ref|YP_564799.1| - 0.02 15.1 0.0 0.037 14.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|91772107|ref|YP_564799.1| - 0.024 14.9 0.0 0.033 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|91772107|ref|YP_564799.1| - 0.064 13.0 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|91772107|ref|YP_564799.1| - 0.12 12.8 0.0 0.21 12.0 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 gi|91772107|ref|YP_564799.1| - 0.12 12.0 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Thymidylate kinase EMC3_TMCO1 PF01956.16 gi|91772108|ref|YP_564800.1| - 3.1e-48 163.7 7.2 3.9e-48 163.4 7.2 1.1 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like HPIH PF13323.6 gi|91772108|ref|YP_564800.1| - 0.076 12.9 0.2 0.16 11.8 0.0 1.6 2 0 0 2 2 2 0 N-terminal domain with HPIH motif RRF_GI PF12614.8 gi|91772108|ref|YP_564800.1| - 0.099 12.8 0.3 0.15 12.3 0.3 1.2 1 0 0 1 1 1 0 Ribosome recycling factor Cytidylate_kin2 PF13189.6 gi|91772109|ref|YP_564801.1| - 7.2e-21 75.1 0.6 1.1e-19 71.3 0.6 2.0 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|91772109|ref|YP_564801.1| - 3.1e-11 43.9 0.0 4.3e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|91772109|ref|YP_564801.1| - 3.3e-11 43.8 0.1 6.3e-11 42.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|91772109|ref|YP_564801.1| - 1.9e-08 34.3 1.5 0.00049 19.9 0.3 2.1 1 1 1 2 2 2 2 Cytidylate kinase ADK PF00406.22 gi|91772109|ref|YP_564801.1| - 6.8e-05 23.0 0.2 0.00042 20.4 0.0 2.1 2 0 0 2 2 2 1 Adenylate kinase SKI PF01202.22 gi|91772109|ref|YP_564801.1| - 0.00016 21.9 0.3 0.42 10.7 0.0 2.1 2 0 0 2 2 2 2 Shikimate kinase CoaE PF01121.20 gi|91772109|ref|YP_564801.1| - 0.0035 17.0 1.2 1.7 8.3 0.1 2.1 1 1 1 2 2 2 2 Dephospho-CoA kinase AAA_33 PF13671.6 gi|91772109|ref|YP_564801.1| - 0.044 13.9 0.3 3.1 7.9 0.0 2.2 1 1 1 2 2 2 0 AAA domain dNK PF01712.19 gi|91772109|ref|YP_564801.1| - 0.13 12.1 0.8 5.8 6.7 0.1 2.1 2 0 0 2 2 2 0 Deoxynucleoside kinase Sulfotransfer_3 PF13469.6 gi|91772109|ref|YP_564801.1| - 0.16 12.3 0.1 0.29 11.5 0.0 1.4 1 1 0 1 1 1 0 Sulfotransferase family TruB_N PF01509.18 gi|91772110|ref|YP_564802.1| - 7.1e-26 91.4 0.4 3.6e-22 79.4 0.4 3.1 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|91772110|ref|YP_564802.1| - 2.1e-24 85.5 0.0 3.8e-24 84.6 0.0 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain DKCLD PF08068.12 gi|91772110|ref|YP_564802.1| - 7.2e-15 54.8 0.0 1.4e-14 53.9 0.0 1.4 1 0 0 1 1 1 1 DKCLD (NUC011) domain PUA PF01472.20 gi|91772110|ref|YP_564802.1| - 1.1e-14 54.1 0.2 2.6e-14 52.9 0.2 1.7 1 0 0 1 1 1 1 PUA domain Fic PF02661.18 gi|91772111|ref|YP_564803.1| - 5.8e-07 30.3 0.3 1.5e-06 29.0 0.2 1.9 2 1 0 2 2 2 1 Fic/DOC family Cytochrome_C7 PF14522.6 gi|91772112|ref|YP_564804.1| - 6.5e-11 42.1 17.5 0.0088 16.0 0.3 4.6 2 1 2 4 4 4 4 Cytochrome c7 and related cytochrome c Cytochrom_C552 PF02335.15 gi|91772112|ref|YP_564804.1| - 3.7e-10 39.3 12.8 1.1e-07 31.1 0.1 3.5 1 1 1 3 3 3 2 Cytochrome c552 Cytochrom_c3_2 PF14537.6 gi|91772112|ref|YP_564804.1| - 1.1e-07 32.2 17.6 0.021 15.2 1.8 4.2 1 1 3 4 4 4 4 Cytochrome c3 Paired_CXXCH_1 PF09699.10 gi|91772112|ref|YP_564804.1| - 2.8e-05 23.7 30.1 0.08 12.7 1.3 5.7 4 3 1 5 5 5 3 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_C554 PF13435.6 gi|91772112|ref|YP_564804.1| - 0.00042 21.2 27.2 0.44 11.5 2.4 5.9 3 3 1 4 4 4 3 Cytochrome c554 and c-prime Cytochrom_CIII PF02085.16 gi|91772112|ref|YP_564804.1| - 0.0051 17.1 17.2 1.1 9.7 6.0 3.9 2 2 1 3 3 3 2 Class III cytochrome C family YokU PF14122.6 gi|91772112|ref|YP_564804.1| - 0.25 11.3 0.9 1.6 8.7 0.2 2.6 1 1 1 2 2 2 0 YokU-like protein, putative antitoxin Cytochrom_NNT PF03264.14 gi|91772112|ref|YP_564804.1| - 0.96 9.1 22.9 1.2 8.8 0.2 5.6 2 2 2 4 4 4 0 NapC/NirT cytochrome c family, N-terminal region DJ-1_PfpI PF01965.24 gi|91772113|ref|YP_564805.1| - 1.2e-39 135.7 0.5 1.4e-39 135.6 0.5 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 gi|91772113|ref|YP_564805.1| - 5.1e-05 23.0 0.0 0.0046 16.7 0.0 2.2 1 1 1 2 2 2 2 ThiJ/PfpI family-like Catalase_C PF18011.1 gi|91772113|ref|YP_564805.1| - 0.016 14.9 0.1 0.025 14.2 0.1 1.4 1 0 0 1 1 1 0 C-terminal domain found in long catalases GATase_3 PF07685.14 gi|91772113|ref|YP_564805.1| - 0.073 12.7 0.0 0.096 12.3 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DUF3458_C PF17432.2 gi|91772114|ref|YP_564806.1| - 7e-30 104.5 3.3 7e-30 104.5 3.3 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF3458_C) ARM repeats Peptidase_M1 PF01433.20 gi|91772114|ref|YP_564806.1| - 8.2e-26 90.9 1.7 1.2e-25 90.3 0.3 2.0 3 0 0 3 3 3 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 gi|91772114|ref|YP_564806.1| - 1.2e-12 48.4 0.1 2.2e-12 47.5 0.1 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain DUF3458 PF11940.8 gi|91772114|ref|YP_564806.1| - 1e-06 29.1 0.0 2.7e-06 27.7 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Ig-like fold HAD_2 PF13419.6 gi|91772115|ref|YP_564807.1| - 2.6e-33 115.6 0.2 3.5e-33 115.2 0.2 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|91772115|ref|YP_564807.1| - 4.9e-17 62.9 0.2 7.2e-16 59.1 0.2 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|91772115|ref|YP_564807.1| - 8.3e-11 41.8 0.0 1.4e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|91772115|ref|YP_564807.1| - 4e-06 27.4 0.0 5.2e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|91772115|ref|YP_564807.1| - 0.0008 18.9 0.1 0.0013 18.2 0.1 1.3 1 0 0 1 1 1 1 Putative Phosphatase Hydrolase_6 PF13344.6 gi|91772115|ref|YP_564807.1| - 0.15 12.1 0.0 0.46 10.6 0.0 1.7 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase EamA PF00892.20 gi|91772117|ref|YP_564809.1| - 2.6e-28 98.9 40.0 5.4e-16 59.0 16.5 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|91772117|ref|YP_564809.1| - 0.0024 17.3 18.7 0.017 14.4 17.4 2.0 1 1 0 1 1 1 1 Triose-phosphate Transporter family TMEM234 PF10639.9 gi|91772117|ref|YP_564809.1| - 3.4 7.8 12.7 1.4 8.9 3.6 2.6 2 1 0 2 2 2 0 Putative transmembrane family 234 DUF2070 PF09843.9 gi|91772117|ref|YP_564809.1| - 4.4 5.5 33.7 0.0078 14.6 16.7 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) Ribosomal_S13 PF00416.22 gi|91772118|ref|YP_564810.1| - 7.6e-40 136.3 0.4 8.9e-40 136.0 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 gi|91772118|ref|YP_564810.1| - 0.021 13.6 0.0 0.022 13.6 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) Nup54_C PF18437.1 gi|91772118|ref|YP_564810.1| - 0.79 9.7 3.4 11 6.0 0.0 2.5 2 0 0 2 2 2 0 Nup54 C-terminal interacting domain S4 PF01479.25 gi|91772119|ref|YP_564811.1| - 1e-15 57.1 0.1 2.4e-15 56.0 0.1 1.6 1 0 0 1 1 1 1 S4 domain Ribosomal_S11 PF00411.19 gi|91772120|ref|YP_564812.1| - 5.1e-47 158.8 2.2 7.2e-47 158.3 2.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S11 Pilus_CpaD PF09476.10 gi|91772120|ref|YP_564812.1| - 0.00085 19.1 0.1 0.0011 18.8 0.1 1.2 1 0 0 1 1 1 1 Pilus biogenesis CpaD protein (pilus_cpaD) CBM_25 PF03423.13 gi|91772120|ref|YP_564812.1| - 0.016 15.5 0.1 0.037 14.3 0.0 1.6 2 0 0 2 2 2 0 Carbohydrate binding domain (family 25) RNA_pol_A_bac PF01000.26 gi|91772121|ref|YP_564813.1| - 4.1e-24 85.1 0.0 1.3e-23 83.4 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|91772121|ref|YP_564813.1| - 1.8e-15 56.1 0.0 3.6e-15 55.1 0.0 1.5 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4 PF00037.27 gi|91772121|ref|YP_564813.1| - 2.9e-07 30.0 13.9 0.00015 21.5 4.3 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91772121|ref|YP_564813.1| - 2.7e-05 24.2 6.6 2.7e-05 24.2 6.6 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91772121|ref|YP_564813.1| - 4.3e-05 24.0 7.0 4.3e-05 24.0 7.0 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91772121|ref|YP_564813.1| - 4.4e-05 23.5 19.1 0.00035 20.7 9.4 3.0 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772121|ref|YP_564813.1| - 0.0013 19.7 12.6 0.018 15.9 0.7 2.9 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|91772121|ref|YP_564813.1| - 0.014 15.5 11.1 0.014 15.5 11.1 2.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772121|ref|YP_564813.1| - 0.022 14.8 2.7 0.022 14.8 2.7 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|91772121|ref|YP_564813.1| - 0.099 13.2 1.7 0.099 13.2 1.7 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|91772121|ref|YP_564813.1| - 0.14 13.2 2.6 0.14 13.2 2.6 3.3 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91772121|ref|YP_564813.1| - 0.17 12.4 14.4 0.31 11.5 0.5 2.7 1 1 2 3 3 3 0 4Fe-4S dicluster domain OapA PF04225.12 gi|91772121|ref|YP_564813.1| - 0.17 12.0 0.0 0.6 10.2 0.0 1.9 2 0 0 2 2 2 0 Opacity-associated protein A LysM-like domain Fer4_17 PF13534.6 gi|91772121|ref|YP_564813.1| - 4.9 7.8 19.8 4 8.1 2.0 2.8 2 1 1 3 3 2 0 4Fe-4S dicluster domain Prenyltransf PF01255.19 gi|91772122|ref|YP_564814.1| - 7.8e-68 228.3 0.1 9.7e-68 228.0 0.1 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase DUF2551 PF10826.8 gi|91772123|ref|YP_564815.1| - 4.5e-31 106.9 0.2 5.3e-31 106.7 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) FUR PF01475.19 gi|91772123|ref|YP_564815.1| - 0.072 13.2 0.0 0.095 12.9 0.0 1.1 1 0 0 1 1 1 0 Ferric uptake regulator family Fer4_14 PF13394.6 gi|91772124|ref|YP_564816.1| - 4.4e-07 30.0 0.0 8.4e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|91772124|ref|YP_564816.1| - 6e-07 30.0 0.2 2.2e-06 28.2 0.1 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|91772124|ref|YP_564816.1| - 0.00036 20.8 0.1 0.0007 19.9 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_6 PF12837.7 gi|91772125|ref|YP_564817.1| - 7.2e-09 35.4 15.0 1.6e-05 24.8 4.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|91772125|ref|YP_564817.1| - 1.5e-08 34.1 13.4 3.4e-05 23.5 3.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91772125|ref|YP_564817.1| - 2.9e-07 30.9 10.5 4e-07 30.5 10.5 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772125|ref|YP_564817.1| - 1.8e-06 27.9 11.7 2.1e-06 27.7 11.7 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91772125|ref|YP_564817.1| - 1.9e-05 24.7 10.5 2.8e-05 24.2 10.5 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772125|ref|YP_564817.1| - 4.1e-05 24.4 9.2 0.0031 18.4 0.5 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|91772125|ref|YP_564817.1| - 9.7e-05 22.4 8.9 0.005 16.9 2.0 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772125|ref|YP_564817.1| - 0.0039 17.2 16.9 0.052 13.7 4.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|91772125|ref|YP_564817.1| - 0.0076 16.7 12.8 0.043 14.3 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|91772125|ref|YP_564817.1| - 0.01 16.7 15.6 0.28 12.2 3.8 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91772125|ref|YP_564817.1| - 0.014 15.8 12.1 0.35 11.4 2.5 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91772125|ref|YP_564817.1| - 0.21 12.2 13.5 0.68 10.5 2.6 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91772125|ref|YP_564817.1| - 1.1 10.1 12.0 0.33 11.7 4.2 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain E1-E2_ATPase PF00122.20 gi|91772126|ref|YP_564818.1| - 0.057 12.9 1.0 0.069 12.7 1.0 1.1 1 0 0 1 1 1 0 E1-E2 ATPase T2SSE PF00437.20 gi|91772127|ref|YP_564819.1| - 1.7e-32 112.6 0.0 2.6e-32 112.0 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_16 PF13191.6 gi|91772127|ref|YP_564819.1| - 0.066 13.6 0.0 0.47 10.8 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain AAA_7 PF12775.7 gi|91772127|ref|YP_564819.1| - 0.16 11.4 0.0 0.33 10.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region UDPG_MGDP_dh_N PF03721.14 gi|91772129|ref|YP_564821.1| - 5.4e-36 123.9 0.0 1e-35 123.1 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|91772129|ref|YP_564821.1| - 2e-21 76.0 0.3 2.6e-20 72.4 0.0 2.5 2 1 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|91772129|ref|YP_564821.1| - 6.5e-20 71.5 0.1 2.2e-19 69.8 0.0 1.9 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THF_DHG_CYH_C PF02882.19 gi|91772129|ref|YP_564821.1| - 0.046 13.0 0.1 7.3 5.9 0.0 2.6 2 1 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF5371 PF17341.2 gi|91772130|ref|YP_564822.1| - 2.9e-38 129.9 9.1 2.9e-38 129.9 9.1 1.3 2 0 0 2 2 2 1 Family of unknown function (DUF5371) Acetyltransf_7 PF13508.7 gi|91772131|ref|YP_564823.1| - 4e-12 46.4 0.0 9.7e-12 45.2 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|91772131|ref|YP_564823.1| - 2.3e-11 43.9 0.0 3.4e-11 43.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|91772131|ref|YP_564823.1| - 7e-09 35.7 0.0 8.6e-09 35.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|91772131|ref|YP_564823.1| - 6.4e-05 23.0 0.0 8.6e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|91772131|ref|YP_564823.1| - 0.00057 20.0 0.0 0.016 15.3 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|91772131|ref|YP_564823.1| - 0.0016 18.6 0.0 0.0041 17.3 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|91772131|ref|YP_564823.1| - 0.0064 17.2 0.0 0.019 15.7 0.0 1.8 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain HTH_16 PF12645.7 gi|91772131|ref|YP_564823.1| - 0.13 12.3 0.1 0.34 11.0 0.1 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain NTP_transf_2 PF01909.23 gi|91772132|ref|YP_564824.1| - 0.00011 22.4 0.2 0.00038 20.7 0.0 1.9 1 1 1 2 2 2 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|91772132|ref|YP_564824.1| - 0.051 13.7 0.2 0.27 11.3 0.1 2.2 2 1 0 2 2 2 0 Polymerase beta, Nucleotidyltransferase DUF2098 PF09871.9 gi|91772133|ref|YP_564825.1| - 1.3e-24 86.3 2.4 1.5e-24 86.2 2.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) DUF2733 PF10813.8 gi|91772133|ref|YP_564825.1| - 0.025 14.3 0.4 0.057 13.2 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) GCHY-1 PF02649.14 gi|91772134|ref|YP_564826.1| - 6.8e-84 281.4 2.6 7.7e-84 281.2 2.6 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 MC1 PF05854.11 gi|91772135|ref|YP_564827.1| - 4.4e-38 129.5 1.0 4.9e-38 129.3 1.0 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 AA_kinase PF00696.28 gi|91772136|ref|YP_564828.1| - 2.1e-46 158.5 5.0 2.4e-46 158.3 5.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family RNaseH_like PF04308.12 gi|91772136|ref|YP_564828.1| - 0.045 13.7 0.0 0.077 12.9 0.0 1.3 1 0 0 1 1 1 0 Ribonuclease H-like Radical_SAM PF04055.21 gi|91772137|ref|YP_564829.1| - 0.00068 20.1 0.3 0.0025 18.2 0.1 2.1 2 1 0 2 2 2 1 Radical SAM superfamily GMP_synt_C PF00958.22 gi|91772138|ref|YP_564830.1| - 3e-27 94.5 0.0 5.8e-27 93.6 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|91772138|ref|YP_564830.1| - 8e-12 44.8 0.0 2e-11 43.5 0.0 1.6 1 1 0 1 1 1 1 NAD synthase QueC PF06508.13 gi|91772138|ref|YP_564830.1| - 0.0007 19.1 0.0 0.0012 18.4 0.0 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|91772138|ref|YP_564830.1| - 0.0011 17.8 0.0 0.014 14.2 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase Arginosuc_synth PF00764.19 gi|91772138|ref|YP_564830.1| - 0.0025 17.2 0.4 0.0039 16.5 0.1 1.4 2 0 0 2 2 2 1 Arginosuccinate synthase PAPS_reduct PF01507.19 gi|91772138|ref|YP_564830.1| - 0.016 15.2 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.20 gi|91772138|ref|YP_564830.1| - 0.1 12.4 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 PP-loop family ThiI PF02568.14 gi|91772138|ref|YP_564830.1| - 0.15 11.6 0.1 0.35 10.4 0.1 1.6 1 1 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 gi|91772138|ref|YP_564830.1| - 0.19 11.3 0.0 0.34 10.5 0.0 1.4 1 0 0 1 1 1 0 Asparagine synthase DUF11 PF01345.18 gi|91772139|ref|YP_564831.1| - 2e-09 37.6 4.6 2e-09 37.6 4.6 2.5 2 1 0 2 2 2 1 Domain of unknown function DUF11 Lactonase PF10282.9 gi|91772139|ref|YP_564831.1| - 0.00014 21.2 4.0 0.00073 18.9 0.2 3.2 1 1 3 4 4 4 1 Lactonase, 7-bladed beta-propeller DUF5128 PF17170.4 gi|91772139|ref|YP_564831.1| - 0.0044 16.2 0.1 0.015 14.5 0.1 1.8 1 1 0 1 1 1 1 6-bladed beta-propeller SGL PF08450.12 gi|91772139|ref|YP_564831.1| - 0.0044 16.6 3.8 0.1 12.2 0.1 3.4 2 1 2 4 4 4 1 SMP-30/Gluconolactonase/LRE-like region PQQ_3 PF13570.6 gi|91772139|ref|YP_564831.1| - 3 8.5 16.7 2 9.0 1.1 5.2 4 1 1 5 5 5 0 PQQ-like domain DUF11 PF01345.18 gi|91772140|ref|YP_564832.1| - 2.6e-07 30.8 6.8 2.6e-07 30.8 6.8 2.4 3 0 0 3 3 3 1 Domain of unknown function DUF11 Lactonase PF10282.9 gi|91772140|ref|YP_564832.1| - 3.4e-06 26.6 0.1 1.5e-05 24.5 0.0 2.1 1 1 1 2 2 2 1 Lactonase, 7-bladed beta-propeller Arylesterase PF01731.20 gi|91772140|ref|YP_564832.1| - 2.5e-05 24.4 1.5 0.21 11.8 0.0 4.7 5 0 0 5 5 5 1 Arylesterase SGL PF08450.12 gi|91772140|ref|YP_564832.1| - 0.00092 18.9 0.8 0.041 13.4 0.6 2.9 1 1 1 2 2 2 1 SMP-30/Gluconolactonase/LRE-like region Chlam_OMP6 PF03504.13 gi|91772140|ref|YP_564832.1| - 0.0049 17.1 0.1 0.14 12.5 0.0 2.5 2 0 0 2 2 2 1 Chlamydia cysteine-rich outer membrane protein 6 RQC PF09382.10 gi|91772141|ref|YP_564833.1| - 2.5e-30 104.6 0.1 1.5e-29 102.0 0.0 2.3 3 0 0 3 3 3 1 RQC domain DEAD PF00270.29 gi|91772141|ref|YP_564833.1| - 2.9e-23 82.5 0.0 2.9e-22 79.3 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|91772141|ref|YP_564833.1| - 3.4e-23 82.1 0.0 4.6e-19 68.8 0.0 2.6 2 0 0 2 2 2 2 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 gi|91772141|ref|YP_564833.1| - 4.4e-19 69.0 2.0 1.2e-18 67.6 2.0 1.8 1 0 0 1 1 1 1 RecQ zinc-binding HRDC PF00570.23 gi|91772141|ref|YP_564833.1| - 6.3e-19 67.7 0.0 1.1e-18 67.0 0.0 1.4 1 0 0 1 1 1 1 HRDC domain Helicase_Sgs1 PF11408.8 gi|91772141|ref|YP_564833.1| - 5.8e-06 26.3 0.1 1.2e-05 25.3 0.1 1.4 1 0 0 1 1 1 1 Sgs1 RecQ helicase ResIII PF04851.15 gi|91772141|ref|YP_564833.1| - 0.00056 20.0 0.0 0.0011 19.1 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Arc_PepC_II PF06847.11 gi|91772142|ref|YP_564834.1| - 1.3e-31 108.9 0.1 1.3e-31 108.9 0.1 2.6 3 0 0 3 3 3 1 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.18 gi|91772142|ref|YP_564834.1| - 1.9e-13 50.7 7.8 3.8e-13 49.8 7.8 1.5 1 1 0 1 1 1 1 Type IV leader peptidase family LptF_LptG PF03739.14 gi|91772142|ref|YP_564834.1| - 5 5.9 14.4 14 4.4 10.2 2.2 1 1 1 2 2 2 0 Lipopolysaccharide export system permease LptF/LptG DUF842 PF05811.13 gi|91772143|ref|YP_564835.1| - 0.016 14.9 0.3 0.042 13.5 0.3 1.6 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) OTCace_N PF02729.21 gi|91772144|ref|YP_564836.1| - 5.9e-46 156.2 0.0 1.3e-45 155.0 0.0 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|91772144|ref|YP_564836.1| - 1.2e-29 103.5 0.0 1.6e-29 103.0 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PyrI PF01948.18 gi|91772145|ref|YP_564837.1| - 3.6e-30 104.1 3.6 5.6e-30 103.4 3.6 1.3 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|91772145|ref|YP_564837.1| - 7.7e-18 64.1 2.6 7.7e-18 64.1 2.6 1.5 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-BED PF02892.15 gi|91772145|ref|YP_564837.1| - 0.21 11.7 1.3 0.4 10.7 0.2 1.9 1 1 1 2 2 2 0 BED zinc finger Beta_helix PF13229.6 gi|91772146|ref|YP_564838.1| - 2.6e-37 128.1 83.7 1.1e-23 83.8 49.7 2.6 1 1 2 3 3 3 2 Right handed beta helix region NosD PF05048.13 gi|91772146|ref|YP_564838.1| - 1.9e-27 96.1 63.5 2.7e-17 62.9 27.9 2.1 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) DUF1565 PF07602.11 gi|91772146|ref|YP_564838.1| - 1.2e-06 28.1 39.4 0.0061 15.9 16.1 3.9 1 1 1 2 2 2 2 Protein of unknown function (DUF1565) Pectate_lyase_3 PF12708.7 gi|91772146|ref|YP_564838.1| - 0.00042 20.2 33.1 0.061 13.2 8.0 3.1 1 1 2 3 3 3 3 Pectate lyase superfamily protein Pectinesterase PF01095.19 gi|91772146|ref|YP_564838.1| - 0.00066 18.5 0.4 0.001 17.8 0.4 1.4 1 0 0 1 1 1 1 Pectinesterase E1-E2_ATPase PF00122.20 gi|91772147|ref|YP_564839.1| - 4.6e-52 176.2 2.0 4.6e-52 176.2 2.0 3.5 4 1 1 5 5 5 1 E1-E2 ATPase Hydrolase PF00702.26 gi|91772147|ref|YP_564839.1| - 1.3e-22 81.2 1.8 2.3e-22 80.4 1.8 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|91772147|ref|YP_564839.1| - 7e-16 57.7 0.0 7e-16 57.7 0.0 2.0 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|91772147|ref|YP_564839.1| - 4e-08 33.3 0.4 0.00018 21.3 0.2 2.8 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|91772147|ref|YP_564839.1| - 0.037 14.1 0.1 0.079 13.1 0.1 1.5 1 0 0 1 1 1 0 Cation transport ATPase (P-type) AA_permease_2 PF13520.6 gi|91772148|ref|YP_564840.1| - 1.2e-37 129.7 49.5 1.5e-37 129.5 49.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|91772148|ref|YP_564840.1| - 3.1e-34 118.4 45.6 5.2e-34 117.7 45.6 1.3 1 1 0 1 1 1 1 Amino acid permease Trp_Tyr_perm PF03222.13 gi|91772148|ref|YP_564840.1| - 0.009 15.1 32.0 0.0088 15.1 28.6 2.2 1 1 1 2 2 2 1 Tryptophan/tyrosine permease family AA_permease_2 PF13520.6 gi|91772149|ref|YP_564841.1| - 7.5e-20 71.2 22.1 2.5e-19 69.4 22.1 1.7 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|91772149|ref|YP_564841.1| - 5.3e-17 61.6 17.9 9.3e-17 60.8 17.8 1.4 1 1 0 1 1 1 1 Amino acid permease NDUF_B5 PF09781.9 gi|91772149|ref|YP_564841.1| - 0.17 11.5 0.2 0.32 10.5 0.2 1.4 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit PhoLip_ATPase_C PF16212.5 gi|91772149|ref|YP_564841.1| - 6.1 6.5 16.0 0.77 9.5 9.8 2.1 1 1 0 2 2 2 0 Phospholipid-translocating P-type ATPase C-terminal HTH_12 PF08461.10 gi|91772150|ref|YP_564842.1| - 0.043 13.8 0.0 0.069 13.1 0.0 1.3 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Abhydrolase_1 PF00561.20 gi|91772151|ref|YP_564843.1| - 5.4e-12 45.9 0.1 4e-06 26.7 0.0 2.6 2 1 0 2 2 2 2 alpha/beta hydrolase fold Ndr PF03096.14 gi|91772151|ref|YP_564843.1| - 0.0099 14.6 0.2 0.019 13.7 0.2 1.7 1 1 0 1 1 1 1 Ndr family Abhydrolase_6 PF12697.7 gi|91772151|ref|YP_564843.1| - 0.062 13.9 0.0 0.34 11.5 0.0 2.0 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF915 PF06028.11 gi|91772151|ref|YP_564843.1| - 0.072 12.4 0.8 5 6.4 0.1 2.7 2 1 1 3 3 3 0 Alpha/beta hydrolase of unknown function (DUF915) Hydrolase_4 PF12146.8 gi|91772151|ref|YP_564843.1| - 0.1 11.9 0.0 0.19 10.9 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Radical_SAM PF04055.21 gi|91772152|ref|YP_564844.1| - 9.1e-15 55.4 0.2 3.2e-14 53.6 0.1 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|91772152|ref|YP_564844.1| - 2.9e-09 37.1 0.2 8.1e-09 35.6 0.2 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|91772152|ref|YP_564844.1| - 6.2e-09 36.3 0.1 1.3e-08 35.2 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|91772152|ref|YP_564844.1| - 2.6e-06 27.8 0.4 6.8e-05 23.3 0.0 3.1 2 1 1 3 3 3 1 Iron-sulfur cluster-binding domain MFS_1 PF07690.16 gi|91772154|ref|YP_564846.1| - 1.4e-35 122.9 26.6 2.1e-35 122.3 26.6 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|91772154|ref|YP_564846.1| - 1.3e-05 24.3 18.2 1.7e-05 23.9 18.2 1.0 1 0 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 gi|91772154|ref|YP_564846.1| - 0.00018 20.5 5.3 0.00018 20.5 5.3 1.7 1 1 0 1 1 1 1 Sugar (and other) transporter LacY_symp PF01306.19 gi|91772154|ref|YP_564846.1| - 0.047 12.5 23.1 0.13 11.0 9.4 2.1 1 1 1 2 2 2 0 LacY proton/sugar symporter CPP1-like PF11833.8 gi|91772154|ref|YP_564846.1| - 0.093 12.4 1.9 0.26 10.9 1.9 1.8 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like MFS_1 PF07690.16 gi|91772155|ref|YP_564847.1| - 1.1e-08 34.5 6.9 1.2e-08 34.4 6.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|91772155|ref|YP_564847.1| - 0.00016 20.7 1.8 0.00017 20.6 1.8 1.1 1 0 0 1 1 1 1 MFS_1 like family DUF647 PF04884.14 gi|91772155|ref|YP_564847.1| - 0.012 15.3 0.1 0.013 15.2 0.1 1.0 1 0 0 1 1 1 0 Vitamin B6 photo-protection and homoeostasis AhpC-TSA PF00578.21 gi|91772156|ref|YP_564848.1| - 2e-37 127.8 0.0 2.4e-37 127.6 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|91772156|ref|YP_564848.1| - 4.5e-21 75.1 0.0 5.3e-21 74.9 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|91772156|ref|YP_564848.1| - 5.1e-05 23.2 0.0 0.00012 22.0 0.0 1.6 1 1 0 1 1 1 1 SCO1/SenC Thioredoxin_8 PF13905.6 gi|91772156|ref|YP_564848.1| - 0.04 14.3 0.0 0.059 13.7 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like DUF899 PF05988.12 gi|91772156|ref|YP_564848.1| - 0.11 12.0 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) MacB_PCD PF12704.7 gi|91772157|ref|YP_564849.1| - 6.1e-25 88.7 1.9 6.1e-25 88.7 1.9 2.1 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|91772157|ref|YP_564849.1| - 2.6e-10 40.6 5.8 2.6e-10 40.6 5.8 3.2 3 0 0 3 3 3 2 FtsX-like permease family DUF2207 PF09972.9 gi|91772157|ref|YP_564849.1| - 0.12 11.1 1.9 37 2.9 6.9 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) MacB_PCD PF12704.7 gi|91772158|ref|YP_564850.1| - 1.5e-24 87.5 8.5 1.5e-24 87.5 8.5 2.2 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|91772158|ref|YP_564850.1| - 2.5e-16 59.9 16.2 1.1e-15 57.9 3.8 3.3 3 0 0 3 3 3 2 FtsX-like permease family Sigma_reg_N PF13800.6 gi|91772158|ref|YP_564850.1| - 0.37 11.1 3.0 5.1 7.5 0.0 3.1 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF11 PF01345.18 gi|91772159|ref|YP_564851.1| - 0.015 15.6 0.3 0.47 10.8 0.4 2.5 2 0 0 2 2 2 0 Domain of unknown function DUF11 NPCBM_assoc PF10633.9 gi|91772159|ref|YP_564851.1| - 0.071 13.4 0.3 2.8 8.2 0.0 3.4 4 0 0 4 4 4 0 NPCBM-associated, NEW3 domain of alpha-galactosidase Cation_efflux PF01545.21 gi|91772159|ref|YP_564851.1| - 0.082 12.6 3.7 2.5 7.8 1.0 2.3 2 0 0 2 2 2 0 Cation efflux family ABC_tran PF00005.27 gi|91772160|ref|YP_564852.1| - 8.6e-33 113.7 0.0 1.2e-32 113.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91772160|ref|YP_564852.1| - 2e-09 37.7 0.1 3.6e-05 23.7 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91772160|ref|YP_564852.1| - 3.6e-06 26.6 0.1 0.062 12.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91772160|ref|YP_564852.1| - 0.00035 20.3 0.1 0.00063 19.4 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|91772160|ref|YP_564852.1| - 0.00038 20.4 0.1 0.00083 19.3 0.1 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|91772160|ref|YP_564852.1| - 0.0039 17.5 0.3 0.031 14.6 0.2 2.0 2 0 0 2 2 2 1 AAA domain G-alpha PF00503.20 gi|91772160|ref|YP_564852.1| - 0.0058 15.8 0.0 0.0074 15.5 0.0 1.1 1 0 0 1 1 1 1 G-protein alpha subunit AAA_23 PF13476.6 gi|91772160|ref|YP_564852.1| - 0.0098 16.4 0.1 0.024 15.1 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|91772160|ref|YP_564852.1| - 0.013 15.9 0.1 0.014 15.8 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 gi|91772160|ref|YP_564852.1| - 0.02 14.6 0.1 0.1 12.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|91772160|ref|YP_564852.1| - 0.022 14.4 0.0 0.05 13.2 0.0 1.5 2 0 0 2 2 1 0 AAA domain MMR_HSR1 PF01926.23 gi|91772160|ref|YP_564852.1| - 0.028 14.5 0.2 0.071 13.2 0.1 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|91772160|ref|YP_564852.1| - 0.048 13.4 0.0 0.19 11.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|91772160|ref|YP_564852.1| - 0.052 13.2 0.0 6.6 6.3 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain ATPase PF06745.13 gi|91772160|ref|YP_564852.1| - 0.056 12.8 0.1 8 5.7 0.0 2.1 2 0 0 2 2 2 0 KaiC ATPase_2 PF01637.18 gi|91772160|ref|YP_564852.1| - 0.074 13.0 0.2 0.7 9.8 0.1 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea DUF87 PF01935.17 gi|91772160|ref|YP_564852.1| - 0.087 12.9 0.2 0.25 11.4 0.1 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_18 PF13238.6 gi|91772160|ref|YP_564852.1| - 0.11 13.0 0.0 0.31 11.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|91772160|ref|YP_564852.1| - 0.13 12.0 0.0 0.5 10.1 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein NB-ARC PF00931.22 gi|91772160|ref|YP_564852.1| - 0.14 11.3 0.2 0.25 10.5 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_33 PF13671.6 gi|91772160|ref|YP_564852.1| - 0.14 12.3 0.2 0.34 11.1 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|91772160|ref|YP_564852.1| - 0.18 11.3 0.1 0.29 10.6 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region HATPase_c PF02518.26 gi|91772161|ref|YP_564853.1| - 1.3e-30 106.1 0.2 3.3e-30 104.9 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase dCache_1 PF02743.18 gi|91772161|ref|YP_564853.1| - 5.3e-20 72.3 3.3 5.3e-20 72.3 3.3 2.7 3 0 0 3 3 3 1 Cache domain HisKA PF00512.25 gi|91772161|ref|YP_564853.1| - 1.4e-18 66.6 0.1 1.4e-18 66.6 0.1 3.1 4 0 0 4 4 3 1 His Kinase A (phospho-acceptor) domain PAS_3 PF08447.12 gi|91772161|ref|YP_564853.1| - 6.5e-15 55.2 0.1 1.4e-14 54.2 0.1 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.6 gi|91772161|ref|YP_564853.1| - 1.6e-05 24.8 0.1 3.9e-05 23.5 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|91772161|ref|YP_564853.1| - 8e-05 22.5 0.6 0.00022 21.1 0.6 1.8 1 0 0 1 1 1 1 GHKL domain PAS_9 PF13426.7 gi|91772161|ref|YP_564853.1| - 0.00013 22.2 0.0 0.00082 19.6 0.0 2.5 1 0 0 1 1 1 1 PAS domain HATPase_c_2 PF13581.6 gi|91772161|ref|YP_564853.1| - 0.0073 16.3 0.0 0.017 15.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain sCache_2 PF17200.4 gi|91772161|ref|YP_564853.1| - 0.038 13.8 0.0 0.086 12.7 0.0 1.5 1 0 0 1 1 1 0 Single Cache domain 2 DUF383 PF04063.14 gi|91772161|ref|YP_564853.1| - 0.061 13.0 0.4 1.2 8.8 0.0 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF383) Neurensin PF14927.6 gi|91772161|ref|YP_564853.1| - 0.072 12.8 0.2 4.5 7.0 0.0 2.3 2 0 0 2 2 2 0 Neurensin CAMP_factor PF07373.11 gi|91772161|ref|YP_564853.1| - 0.092 12.3 1.3 0.13 11.9 0.1 1.8 2 0 0 2 2 2 0 CAMP factor (Cfa) WVELL PF14043.6 gi|91772161|ref|YP_564853.1| - 0.11 12.3 0.0 0.42 10.5 0.0 1.9 1 0 0 1 1 1 0 WVELL protein NOD PF06816.13 gi|91772161|ref|YP_564853.1| - 0.17 11.5 0.0 0.44 10.2 0.0 1.7 1 0 0 1 1 1 0 NOTCH protein Methyltransf_31 PF13847.6 gi|91772162|ref|YP_564854.1| - 4.4e-23 81.8 0.0 5.7e-23 81.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|91772162|ref|YP_564854.1| - 9.4e-23 80.7 0.0 1.4e-22 80.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91772162|ref|YP_564854.1| - 1e-21 77.4 0.0 1.6e-21 76.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|91772162|ref|YP_564854.1| - 2.5e-16 59.8 0.0 4.1e-16 59.0 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|91772162|ref|YP_564854.1| - 6e-16 58.7 0.0 7.4e-16 58.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91772162|ref|YP_564854.1| - 2.1e-14 54.0 0.0 3e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|91772162|ref|YP_564854.1| - 6.6e-06 26.0 0.0 1.2e-05 25.2 0.0 1.4 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 gi|91772162|ref|YP_564854.1| - 2.3e-05 24.0 0.0 0.00095 18.7 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain CMAS PF02353.20 gi|91772162|ref|YP_564854.1| - 7.7e-05 22.1 0.0 9.7e-05 21.8 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.11 gi|91772162|ref|YP_564854.1| - 0.00024 20.1 0.0 0.00031 19.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Fibrillarin PF01269.17 gi|91772162|ref|YP_564854.1| - 0.00027 20.1 0.0 0.00052 19.2 0.0 1.4 1 0 0 1 1 1 1 Fibrillarin Methyltransf_2 PF00891.18 gi|91772162|ref|YP_564854.1| - 0.00038 19.8 0.0 0.00057 19.3 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain PrmA PF06325.13 gi|91772162|ref|YP_564854.1| - 0.00049 19.6 0.0 0.0017 17.8 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) MetW PF07021.12 gi|91772162|ref|YP_564854.1| - 0.0023 17.6 0.0 0.003 17.2 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_4 PF02390.17 gi|91772162|ref|YP_564854.1| - 0.0023 17.4 0.1 0.1 12.1 0.0 2.3 2 1 0 2 2 2 1 Putative methyltransferase Methyltransf_8 PF05148.15 gi|91772162|ref|YP_564854.1| - 0.0058 16.5 0.1 0.044 13.6 0.1 2.2 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltr_RsmB-F PF01189.17 gi|91772162|ref|YP_564854.1| - 0.014 15.1 0.0 0.029 14.0 0.0 1.5 1 1 0 2 2 2 0 16S rRNA methyltransferase RsmB/F N6_N4_Mtase PF01555.18 gi|91772162|ref|YP_564854.1| - 0.016 14.9 0.1 0.62 9.7 0.0 2.3 2 1 0 2 2 2 0 DNA methylase Methyltransf_32 PF13679.6 gi|91772162|ref|YP_564854.1| - 0.021 14.8 0.0 0.033 14.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain AdoMet_MTase PF07757.13 gi|91772162|ref|YP_564854.1| - 0.04 14.3 0.0 0.063 13.6 0.0 1.3 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase DOT1 PF08123.13 gi|91772162|ref|YP_564854.1| - 0.055 13.0 0.0 0.28 10.7 0.0 1.9 2 0 0 2 2 2 0 Histone methylation protein DOT1 Methyltransf_5 PF01795.19 gi|91772162|ref|YP_564854.1| - 0.061 12.8 0.0 0.14 11.6 0.0 1.6 1 1 1 2 2 2 0 MraW methylase family SfsA PF03749.13 gi|91772163|ref|YP_564855.1| - 8.7e-41 139.1 0.0 1.1e-40 138.8 0.0 1.1 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain SfsA_N PF17746.1 gi|91772163|ref|YP_564855.1| - 1.6e-24 85.8 0.0 3.6e-24 84.7 0.0 1.6 2 0 0 2 2 2 1 SfsA N-terminal OB domain DUF5518 PF17647.1 gi|91772164|ref|YP_564856.1| - 1.9e-06 28.0 27.9 2.2e-06 27.8 27.9 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5518) Caveolin PF01146.17 gi|91772164|ref|YP_564856.1| - 8.3 6.4 6.7 1.9 8.4 3.4 1.7 2 0 0 2 2 2 0 Caveolin Ribo_biogen_C PF04034.13 gi|91772165|ref|YP_564857.1| - 4.4e-48 162.2 0.0 5.4e-48 161.9 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|91772165|ref|YP_564857.1| - 1.1e-15 57.2 1.1 1.7e-15 56.5 1.1 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI RNA_Me_trans PF04252.13 gi|91772165|ref|YP_564857.1| - 0.014 15.0 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 Predicted SAM-dependent RNA methyltransferase TusA PF01206.17 gi|91772166|ref|YP_564858.1| - 1.8e-23 82.1 0.3 2e-23 82.0 0.3 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DrsE_2 PF13686.6 gi|91772167|ref|YP_564859.1| - 2.8e-33 115.0 1.6 2.6e-21 76.1 0.2 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|91772167|ref|YP_564859.1| - 7.2e-06 26.4 0.0 1.1e-05 25.8 0.0 1.3 1 1 0 1 1 1 1 DsrE/DsrF-like family Rubredoxin PF00301.20 gi|91772168|ref|YP_564860.1| - 3.4e-16 59.0 4.0 3.7e-16 58.9 4.0 1.0 1 0 0 1 1 1 1 Rubredoxin Zn-ribbon_8 PF09723.10 gi|91772168|ref|YP_564860.1| - 0.0043 17.1 3.9 0.022 14.9 3.9 1.9 1 1 0 1 1 1 1 Zinc ribbon domain zinc_ribbon_10 PF10058.9 gi|91772168|ref|YP_564860.1| - 0.0094 15.7 0.5 1.4 8.7 0.0 2.1 2 0 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein zf-Sec23_Sec24 PF04810.15 gi|91772168|ref|YP_564860.1| - 0.014 15.4 1.3 0.58 10.2 0.1 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger zf-ribbon_3 PF13248.6 gi|91772168|ref|YP_564860.1| - 0.022 14.2 1.9 0.35 10.3 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Desulfoferrod_N PF06397.12 gi|91772168|ref|YP_564860.1| - 0.023 14.3 1.0 4.3 7.1 0.5 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-RanBP PF00641.18 gi|91772168|ref|YP_564860.1| - 0.023 14.0 3.9 0.058 12.7 0.3 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others PHD_4 PF16866.5 gi|91772168|ref|YP_564860.1| - 0.026 14.6 1.8 0.057 13.5 1.8 1.6 1 1 0 1 1 1 0 PHD-finger zf-CCHC_2 PF13696.6 gi|91772168|ref|YP_564860.1| - 0.033 14.0 1.1 2.7 7.9 0.3 2.2 2 0 0 2 2 2 0 Zinc knuckle Vps36-NZF-N PF16988.5 gi|91772168|ref|YP_564860.1| - 0.033 13.6 0.5 0.077 12.4 0.0 1.8 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain C1_2 PF03107.16 gi|91772168|ref|YP_564860.1| - 0.072 13.4 1.3 10 6.6 0.5 2.1 2 0 0 2 2 2 0 C1 domain zf-MIZ PF02891.20 gi|91772168|ref|YP_564860.1| - 0.09 12.5 1.6 0.26 11.1 0.3 2.0 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger zf-RRN7 PF11781.8 gi|91772168|ref|YP_564860.1| - 0.12 12.1 2.2 2.3 8.0 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 RbpA PF13397.6 gi|91772168|ref|YP_564860.1| - 0.19 12.4 0.1 0.21 12.2 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase-binding protein zf-C2H2_6 PF13912.6 gi|91772168|ref|YP_564860.1| - 0.48 10.5 2.7 8.1 6.6 0.6 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger zf-met PF12874.7 gi|91772168|ref|YP_564860.1| - 1.9 9.0 5.0 9.1 6.8 1.2 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Rubredoxin_2 PF18073.1 gi|91772168|ref|YP_564860.1| - 4.5 7.1 8.0 8.1 6.3 1.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Glu_synthase PF01645.17 gi|91772169|ref|YP_564861.1| - 1.5e-92 310.6 0.0 1.9e-92 310.2 0.0 1.1 1 0 0 1 1 1 1 Conserved region in glutamate synthase Rubredoxin PF00301.20 gi|91772169|ref|YP_564861.1| - 5.3e-15 55.2 4.7 1.3e-14 54.0 4.7 1.7 1 0 0 1 1 1 1 Rubredoxin FMN_dh PF01070.18 gi|91772169|ref|YP_564861.1| - 2.1e-07 30.3 0.2 9.2e-07 28.2 0.1 2.0 2 0 0 2 2 2 1 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|91772169|ref|YP_564861.1| - 2e-05 23.8 0.1 4e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain Vps36-NZF-N PF16988.5 gi|91772169|ref|YP_564861.1| - 0.0015 17.9 0.6 0.0037 16.6 0.6 1.6 1 0 0 1 1 1 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain Elf1 PF05129.13 gi|91772169|ref|YP_564861.1| - 0.003 17.6 0.4 0.003 17.6 0.4 2.0 2 0 0 2 2 2 1 Transcription elongation factor Elf1 like NMO PF03060.15 gi|91772169|ref|YP_564861.1| - 0.0035 16.8 0.4 0.014 14.8 0.2 2.0 2 0 0 2 2 2 1 Nitronate monooxygenase Ima1_N PF09779.9 gi|91772169|ref|YP_564861.1| - 0.039 14.8 0.9 0.1 13.5 0.9 1.7 1 0 0 1 1 1 0 Ima1 N-terminal domain His_biosynth PF00977.21 gi|91772169|ref|YP_564861.1| - 0.086 12.3 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein LrgB PF04172.16 gi|91772169|ref|YP_564861.1| - 0.18 11.3 0.1 0.27 10.7 0.1 1.2 1 0 0 1 1 1 0 LrgB-like family Zn-ribbon_8 PF09723.10 gi|91772169|ref|YP_564861.1| - 0.19 11.9 5.6 1.3 9.2 2.6 2.9 2 1 0 2 2 2 0 Zinc ribbon domain zf-Di19 PF05605.12 gi|91772169|ref|YP_564861.1| - 0.38 11.1 3.1 0.3 11.4 0.5 2.2 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding PHD_4 PF16866.5 gi|91772169|ref|YP_564861.1| - 0.86 9.7 6.6 0.61 10.2 1.1 2.6 1 1 1 2 2 2 0 PHD-finger zf-ribbon_3 PF13248.6 gi|91772169|ref|YP_564861.1| - 3.1 7.3 6.2 18 4.9 0.4 3.1 3 0 0 3 3 3 0 zinc-ribbon domain Lyase_1 PF00206.20 gi|91772170|ref|YP_564862.1| - 8.6e-07 28.6 0.0 1e-06 28.4 0.0 1.0 1 0 0 1 1 1 1 Lyase Fer2_3 PF13085.6 gi|91772171|ref|YP_564863.1| - 3.9e-09 36.5 0.0 8.3e-09 35.4 0.0 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|91772171|ref|YP_564863.1| - 0.0032 17.9 0.5 0.0061 17.0 0.5 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772171|ref|YP_564863.1| - 0.0054 16.8 0.7 0.01 15.9 0.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91772171|ref|YP_564863.1| - 0.0078 16.7 0.6 0.014 15.9 0.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91772171|ref|YP_564863.1| - 0.014 15.2 2.0 0.029 14.2 2.0 1.5 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91772171|ref|YP_564863.1| - 0.017 16.0 0.2 0.046 14.6 0.2 1.7 1 0 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|91772171|ref|YP_564863.1| - 0.018 15.7 0.5 0.061 13.9 0.3 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772171|ref|YP_564863.1| - 0.024 14.7 0.9 0.024 14.7 0.9 1.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772171|ref|YP_564863.1| - 0.07 13.7 1.2 0.19 12.3 1.2 1.7 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91772171|ref|YP_564863.1| - 0.31 11.2 4.3 0.13 12.4 1.4 1.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Topoisom_bac PF01131.20 gi|91772172|ref|YP_564864.1| - 4.6e-124 414.6 0.0 6e-124 414.2 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|91772172|ref|YP_564864.1| - 3.6e-15 56.0 0.3 9.3e-15 54.7 0.3 1.7 1 0 0 1 1 1 1 Toprim domain zf-C4_Topoisom PF01396.19 gi|91772172|ref|YP_564864.1| - 2.2e-13 49.7 2.2 2.2e-13 49.7 2.2 2.3 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger HHH_5 PF14520.6 gi|91772172|ref|YP_564864.1| - 5.6e-05 23.7 0.1 0.00016 22.2 0.1 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|91772172|ref|YP_564864.1| - 0.00017 21.3 0.0 0.00052 19.8 0.0 1.7 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|91772172|ref|YP_564864.1| - 0.00047 20.3 0.0 0.0011 19.1 0.0 1.6 1 0 0 1 1 1 1 Pathogenicity locus IMS_HHH PF11798.8 gi|91772172|ref|YP_564864.1| - 0.00069 19.8 0.0 0.0021 18.3 0.0 1.9 1 0 0 1 1 1 1 IMS family HHH motif TfoX_C PF04994.13 gi|91772172|ref|YP_564864.1| - 0.019 15.1 0.2 0.16 12.1 0.1 2.4 2 0 0 2 2 2 0 TfoX C-terminal domain Zn_ribbon_recom PF13408.6 gi|91772172|ref|YP_564864.1| - 0.041 14.4 0.8 0.1 13.1 0.8 1.7 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain HHH PF00633.23 gi|91772172|ref|YP_564864.1| - 0.042 13.7 0.0 0.13 12.2 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF4332 PF14229.6 gi|91772172|ref|YP_564864.1| - 0.084 13.1 0.1 0.18 12.1 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) DUF2283 PF10049.9 gi|91772172|ref|YP_564864.1| - 0.15 12.3 0.1 0.42 10.9 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2283) Beta-Casp PF10996.8 gi|91772173|ref|YP_564865.1| - 1.3e-12 48.0 0.0 2.6e-12 47.0 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 gi|91772173|ref|YP_564865.1| - 1.5e-10 40.8 0.1 8.8e-10 38.4 0.0 2.2 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|91772173|ref|YP_564865.1| - 2.4e-09 37.0 0.1 4.4e-09 36.1 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|91772173|ref|YP_564865.1| - 1.8e-07 31.4 0.8 0.00012 22.2 0.2 2.4 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|91772173|ref|YP_564865.1| - 3e-06 26.8 0.0 9.8e-06 25.1 0.0 1.9 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|91772173|ref|YP_564865.1| - 6.1e-05 23.0 0.1 0.00018 21.4 0.1 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Endopep_inhib PF16800.5 gi|91772173|ref|YP_564865.1| - 0.0021 18.0 0.1 0.011 15.7 0.0 1.9 2 0 0 2 2 2 1 IseA DL-endopeptidase inhibitor DUF2148 PF09918.9 gi|91772174|ref|YP_564866.1| - 3.2e-31 107.2 1.2 6.1e-31 106.3 1.2 1.5 1 0 0 1 1 1 1 Uncharacterized protein containing a ferredoxin domain (DUF2148) FeS PF04060.13 gi|91772174|ref|YP_564866.1| - 2.7e-05 23.7 2.4 8.1e-05 22.2 2.4 1.9 1 0 0 1 1 1 1 Putative Fe-S cluster LDcluster4 PF18306.1 gi|91772174|ref|YP_564866.1| - 0.086 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 SLOG cluster4 family RIO1 PF01163.22 gi|91772175|ref|YP_564867.1| - 2.4e-39 134.9 0.1 3.3e-39 134.5 0.1 1.2 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.11 gi|91772175|ref|YP_564867.1| - 1.5e-25 89.2 0.3 3.6e-25 88.0 0.1 1.8 2 0 0 2 2 2 1 Rio2, N-terminal Kdo PF06293.14 gi|91772175|ref|YP_564867.1| - 6.4e-05 22.4 0.6 0.021 14.2 0.1 2.5 2 1 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 gi|91772175|ref|YP_564867.1| - 0.002 17.5 0.0 0.0039 16.6 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|91772175|ref|YP_564867.1| - 0.032 14.1 0.0 0.22 11.4 0.0 1.9 1 1 1 2 2 2 0 Phosphotransferase enzyme family FTA2 PF13095.6 gi|91772175|ref|YP_564867.1| - 0.13 11.9 0.1 0.39 10.3 0.1 1.9 2 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 DUF2111 PF09884.9 gi|91772176|ref|YP_564868.1| - 1.1e-33 115.1 2.4 1.4e-33 114.8 2.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) Pyr_redox_2 PF07992.14 gi|91772177|ref|YP_564869.1| - 6.7e-44 150.3 2.6 7.7e-44 150.1 2.6 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|91772177|ref|YP_564869.1| - 7.3e-27 94.4 1.0 5e-19 68.7 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|91772177|ref|YP_564869.1| - 7e-14 52.2 6.4 8.4e-13 48.7 0.2 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|91772177|ref|YP_564869.1| - 9.4e-08 31.2 1.9 0.004 15.9 0.1 3.1 3 0 0 3 3 3 2 HI0933-like protein FAD_binding_2 PF00890.24 gi|91772177|ref|YP_564869.1| - 1.4e-07 30.9 4.4 2e-05 23.8 0.5 3.4 4 0 0 4 4 4 2 FAD binding domain DAO PF01266.24 gi|91772177|ref|YP_564869.1| - 8.4e-07 28.9 6.4 0.021 14.4 1.9 3.0 3 0 0 3 3 3 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|91772177|ref|YP_564869.1| - 1.8e-06 27.6 6.0 8.7e-05 22.0 1.0 2.4 2 1 0 2 2 2 2 FAD dependent oxidoreductase GIDA PF01134.22 gi|91772177|ref|YP_564869.1| - 6.3e-06 25.5 3.9 0.00035 19.8 0.2 3.1 2 1 1 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|91772177|ref|YP_564869.1| - 2.5e-05 23.7 1.2 0.005 16.1 0.2 2.3 2 0 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 gi|91772177|ref|YP_564869.1| - 0.00018 21.7 2.2 0.00062 19.9 0.2 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|91772177|ref|YP_564869.1| - 0.00044 19.6 5.2 0.0062 15.8 0.5 2.5 2 1 0 2 2 2 2 Thi4 family K_oxygenase PF13434.6 gi|91772177|ref|YP_564869.1| - 0.0029 16.8 0.8 0.15 11.2 0.0 2.3 2 1 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.6 gi|91772177|ref|YP_564869.1| - 0.014 15.8 1.6 0.038 14.4 0.2 2.3 2 2 0 2 2 2 0 Putative NAD(P)-binding FMO-like PF00743.19 gi|91772177|ref|YP_564869.1| - 0.047 12.1 0.0 0.065 11.6 0.0 1.2 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Lycopene_cycl PF05834.12 gi|91772177|ref|YP_564869.1| - 0.33 10.0 2.3 5.5 5.9 0.2 2.8 3 0 0 3 3 3 0 Lycopene cyclase protein Thioredoxin_3 PF13192.6 gi|91772178|ref|YP_564870.1| - 1.9e-12 47.1 0.0 2.1e-12 46.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|91772178|ref|YP_564870.1| - 4.1e-06 26.9 0.0 5.4e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin PF00085.20 gi|91772178|ref|YP_564870.1| - 0.00024 21.0 0.1 0.00028 20.8 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|91772178|ref|YP_564870.1| - 0.00058 20.1 0.1 0.018 15.4 0.0 2.3 1 1 1 2 2 2 1 Thioredoxin-like DUF836 PF05768.14 gi|91772178|ref|YP_564870.1| - 0.0064 16.9 0.0 0.0066 16.8 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) DSBA PF01323.20 gi|91772178|ref|YP_564870.1| - 0.025 14.4 0.0 0.025 14.4 0.0 1.2 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 gi|91772178|ref|YP_564870.1| - 0.083 13.3 0.3 0.38 11.2 0.3 1.9 1 1 0 1 1 1 0 Thioredoxin-like domain NPCBM_assoc PF10633.9 gi|91772179|ref|YP_564871.1| - 0.00017 21.8 0.2 0.00042 20.5 0.2 1.6 1 0 0 1 1 1 1 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|91772179|ref|YP_564871.1| - 0.0019 18.5 0.1 0.0053 17.0 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function DUF11 DUF4878 PF12870.7 gi|91772179|ref|YP_564871.1| - 0.03 14.6 0.3 0.16 12.3 0.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4878) Arch_flagellin PF01917.16 gi|91772180|ref|YP_564872.1| - 1.2e-32 113.3 12.7 1.9e-32 112.7 12.7 1.3 1 0 0 1 1 1 1 Archaebacterial flagellin DUF2749 PF10907.8 gi|91772180|ref|YP_564872.1| - 8.9 6.6 5.9 5.2 7.3 1.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2749) HisKA_7TM PF16927.5 gi|91772181|ref|YP_564873.1| - 4.6 7.2 31.7 6 6.8 31.7 1.1 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase Mrr_N PF14338.6 gi|91772182|ref|YP_564874.1| - 0.065 13.4 0.1 0.61 10.3 0.0 2.1 2 0 0 2 2 2 0 Mrr N-terminal domain IGPS PF00218.21 gi|91772183|ref|YP_564875.1| - 3.9e-67 226.1 1.8 4.4e-67 225.9 1.8 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase NanE PF04131.14 gi|91772183|ref|YP_564875.1| - 1.4e-06 27.7 3.8 8.8e-05 21.8 0.0 3.4 2 2 2 4 4 4 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 gi|91772183|ref|YP_564875.1| - 0.00022 20.8 0.1 0.00037 20.0 0.1 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein PcrB PF01884.17 gi|91772183|ref|YP_564875.1| - 0.00054 19.5 0.8 0.00086 18.8 0.1 1.7 2 0 0 2 2 2 1 PcrB family ThiG PF05690.14 gi|91772183|ref|YP_564875.1| - 0.00065 19.1 0.0 0.0017 17.7 0.0 1.7 1 1 0 1 1 1 1 Thiazole biosynthesis protein ThiG DHO_dh PF01180.21 gi|91772183|ref|YP_564875.1| - 0.0009 18.5 0.0 0.0036 16.6 0.0 2.0 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Radical_SAM PF04055.21 gi|91772183|ref|YP_564875.1| - 0.018 15.4 0.4 0.11 12.9 0.3 2.4 1 1 1 2 2 2 0 Radical SAM superfamily FMN_dh PF01070.18 gi|91772183|ref|YP_564875.1| - 0.059 12.4 0.0 0.14 11.2 0.0 1.6 2 0 0 2 2 2 0 FMN-dependent dehydrogenase PEP_hydrolase PF09370.10 gi|91772183|ref|YP_564875.1| - 0.095 11.9 0.0 0.23 10.7 0.0 1.7 1 0 0 1 1 1 0 Phosphoenolpyruvate hydrolase-like PALP PF00291.25 gi|91772184|ref|YP_564876.1| - 1.5e-39 136.2 0.7 1.7e-39 136.0 0.7 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Trp_syntA PF00290.20 gi|91772185|ref|YP_564877.1| - 2.5e-92 308.4 0.1 3e-92 308.1 0.1 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 gi|91772185|ref|YP_564877.1| - 1e-05 25.1 0.4 1.9e-05 24.3 0.4 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein PcrB PF01884.17 gi|91772185|ref|YP_564877.1| - 0.00013 21.5 0.9 0.0034 16.9 0.4 2.3 2 0 0 2 2 2 1 PcrB family ThiG PF05690.14 gi|91772185|ref|YP_564877.1| - 0.0087 15.4 0.2 0.012 15.0 0.2 1.2 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG NanE PF04131.14 gi|91772185|ref|YP_564877.1| - 0.032 13.4 0.8 0.13 11.5 0.4 2.2 2 1 1 3 3 3 0 Putative N-acetylmannosamine-6-phosphate epimerase DHO_dh PF01180.21 gi|91772185|ref|YP_564877.1| - 0.043 13.0 0.6 0.059 12.6 0.6 1.2 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase PEP_hydrolase PF09370.10 gi|91772185|ref|YP_564877.1| - 0.05 12.8 0.1 1 8.5 0.0 2.6 3 0 0 3 3 3 0 Phosphoenolpyruvate hydrolase-like IMPDH PF00478.25 gi|91772185|ref|YP_564877.1| - 0.053 12.5 0.5 0.14 11.2 0.3 1.7 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|91772185|ref|YP_564877.1| - 0.075 12.1 0.3 0.12 11.3 0.3 1.4 1 0 0 1 1 1 0 FMN-dependent dehydrogenase SRP54 PF00448.22 gi|91772186|ref|YP_564878.1| - 8.2e-73 244.2 0.7 1.1e-72 243.7 0.7 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|91772186|ref|YP_564878.1| - 4.1e-11 42.9 5.5 4.4e-11 42.8 1.6 2.5 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain AAA_17 PF13207.6 gi|91772186|ref|YP_564878.1| - 1.6e-05 25.3 0.5 3.8e-05 24.1 0.2 1.8 2 0 0 2 2 1 1 AAA domain AAA_30 PF13604.6 gi|91772186|ref|YP_564878.1| - 7e-05 22.6 0.5 0.00013 21.7 0.5 1.4 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|91772186|ref|YP_564878.1| - 8.9e-05 21.9 0.2 0.00018 20.8 0.2 1.5 1 1 0 1 1 1 1 Zeta toxin Thymidylate_kin PF02223.17 gi|91772186|ref|YP_564878.1| - 0.00018 21.2 0.1 0.0057 16.4 0.0 2.6 2 0 0 2 2 2 1 Thymidylate kinase AAA PF00004.29 gi|91772186|ref|YP_564878.1| - 0.00022 21.6 0.2 0.0013 19.2 0.2 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|91772186|ref|YP_564878.1| - 0.00036 20.8 0.1 0.0012 19.2 0.1 1.9 1 1 0 1 1 1 1 AAA domain cobW PF02492.19 gi|91772186|ref|YP_564878.1| - 0.0005 19.7 0.5 0.001 18.7 0.5 1.5 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain APS_kinase PF01583.20 gi|91772186|ref|YP_564878.1| - 0.0019 18.1 0.0 0.0037 17.2 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.6 gi|91772186|ref|YP_564878.1| - 0.0024 18.1 0.1 0.009 16.2 0.1 2.1 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|91772186|ref|YP_564878.1| - 0.0025 18.1 0.0 0.0079 16.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|91772186|ref|YP_564878.1| - 0.003 18.0 0.0 0.0068 16.8 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 gi|91772186|ref|YP_564878.1| - 0.0033 17.0 0.0 0.0071 15.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF2075 PF09848.9 gi|91772186|ref|YP_564878.1| - 0.012 14.8 0.5 0.02 14.1 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MMR_HSR1 PF01926.23 gi|91772186|ref|YP_564878.1| - 0.016 15.3 0.4 0.071 13.2 0.4 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase ABC_tran PF00005.27 gi|91772186|ref|YP_564878.1| - 0.021 15.3 0.1 0.057 13.9 0.0 1.7 2 0 0 2 2 2 0 ABC transporter Peripla_BP_6 PF13458.6 gi|91772186|ref|YP_564878.1| - 0.021 14.5 0.1 0.034 13.8 0.1 1.4 1 0 0 1 1 1 0 Periplasmic binding protein AAA_19 PF13245.6 gi|91772186|ref|YP_564878.1| - 0.028 14.8 0.5 0.063 13.6 0.5 1.6 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|91772186|ref|YP_564878.1| - 0.032 13.2 0.1 0.059 12.3 0.1 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain MobB PF03205.14 gi|91772186|ref|YP_564878.1| - 0.044 13.7 3.1 0.22 11.4 0.3 2.3 1 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 gi|91772186|ref|YP_564878.1| - 0.06 13.3 1.6 0.38 10.7 1.4 2.2 1 1 0 1 1 1 0 NTPase CbiA PF01656.23 gi|91772186|ref|YP_564878.1| - 0.076 13.1 0.2 0.26 11.3 0.2 2.1 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_24 PF13479.6 gi|91772186|ref|YP_564878.1| - 0.082 12.6 0.0 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain Arf PF00025.21 gi|91772186|ref|YP_564878.1| - 0.093 12.2 0.0 0.2 11.1 0.0 1.5 1 0 0 1 1 1 0 ADP-ribosylation factor family ResIII PF04851.15 gi|91772186|ref|YP_564878.1| - 0.1 12.6 0.2 0.17 11.8 0.2 1.5 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit ATPase_2 PF01637.18 gi|91772186|ref|YP_564878.1| - 0.11 12.4 1.0 0.21 11.5 0.1 2.0 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea AAA_18 PF13238.6 gi|91772186|ref|YP_564878.1| - 0.16 12.5 0.4 0.57 10.7 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_31 PF13614.6 gi|91772186|ref|YP_564878.1| - 0.17 11.8 1.5 0.86 9.5 0.2 2.2 2 0 0 2 2 2 0 AAA domain KTI12 PF08433.10 gi|91772186|ref|YP_564878.1| - 0.19 11.2 0.7 0.36 10.2 0.0 1.8 2 0 0 2 2 2 0 Chromatin associated protein KTI12 Prefoldin PF02996.17 gi|91772187|ref|YP_564879.1| - 5.7e-24 84.3 0.6 8.3e-24 83.8 0.3 1.3 1 1 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|91772187|ref|YP_564879.1| - 1.2e-06 28.5 4.0 0.0033 17.3 0.1 2.1 1 1 1 2 2 2 2 Prefoldin subunit Seryl_tRNA_N PF02403.22 gi|91772187|ref|YP_564879.1| - 0.0059 16.8 0.4 2.7 8.3 0.0 2.2 2 0 0 2 2 2 2 Seryl-tRNA synthetase N-terminal domain DUF148 PF02520.17 gi|91772187|ref|YP_564879.1| - 0.0061 16.6 1.4 1.9 8.6 0.3 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF148 DUF1664 PF07889.12 gi|91772187|ref|YP_564879.1| - 0.0072 16.4 1.6 2.2 8.3 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1664) KAR9 PF08580.10 gi|91772187|ref|YP_564879.1| - 0.017 13.7 0.0 0.017 13.7 0.0 1.2 1 0 0 1 1 1 0 Yeast cortical protein KAR9 NPV_P10 PF05531.12 gi|91772187|ref|YP_564879.1| - 0.017 15.6 1.3 1.5 9.3 0.1 2.2 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Med30 PF11315.8 gi|91772187|ref|YP_564879.1| - 0.017 15.3 2.3 3.2 7.9 1.1 2.2 2 1 0 2 2 2 0 Mediator complex subunit 30 DUF16 PF01519.16 gi|91772187|ref|YP_564879.1| - 0.026 15.0 0.8 0.09 13.3 0.7 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 CdvA PF18822.1 gi|91772187|ref|YP_564879.1| - 0.054 13.3 2.4 2.6 7.9 0.1 2.2 2 0 0 2 2 2 0 CdvA-like coiled-coil domain Flagellin_C PF00700.21 gi|91772187|ref|YP_564879.1| - 0.058 13.7 3.4 0.24 11.8 0.1 2.7 2 1 1 3 3 3 0 Bacterial flagellin C-terminal helical region Cortex-I_coil PF09304.10 gi|91772187|ref|YP_564879.1| - 0.076 13.2 1.1 4.3 7.6 0.0 2.1 2 0 0 2 2 2 0 Cortexillin I, coiled coil Syntaxin-6_N PF09177.11 gi|91772187|ref|YP_564879.1| - 0.077 13.6 0.6 8.6 7.0 0.2 2.2 2 0 0 2 2 2 0 Syntaxin 6, N-terminal IFT57 PF10498.9 gi|91772187|ref|YP_564879.1| - 0.13 11.2 2.1 4.5 6.1 0.6 2.0 2 0 0 2 2 2 0 Intra-flagellar transport protein 57 Spc7 PF08317.11 gi|91772187|ref|YP_564879.1| - 1.3 7.8 4.4 7.8 5.3 1.4 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein Ribosomal_L18A PF01775.17 gi|91772188|ref|YP_564880.1| - 2.9e-10 40.3 0.2 3.3e-10 40.1 0.2 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A eIF-6 PF01912.18 gi|91772189|ref|YP_564881.1| - 8.3e-66 221.1 4.8 9.8e-66 220.9 4.8 1.0 1 0 0 1 1 1 1 eIF-6 family Ribosomal_L31e PF01198.19 gi|91772190|ref|YP_564882.1| - 9e-08 32.2 0.1 1.1e-07 32.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e Ribosomal_L39 PF00832.20 gi|91772191|ref|YP_564883.1| - 1.6e-21 75.7 8.7 1.8e-21 75.5 8.7 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Asn_synthase PF00733.21 gi|91772192|ref|YP_564884.1| - 0.12 12.1 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase DUF3969 PF13108.6 gi|91772192|ref|YP_564884.1| - 0.12 12.4 0.2 0.32 11.0 0.0 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3969) dsDNA_bind PF01984.20 gi|91772193|ref|YP_564885.1| - 1.7e-28 99.1 20.9 1.9e-28 98.9 20.9 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain MTBP_N PF14918.6 gi|91772193|ref|YP_564885.1| - 0.066 12.7 2.1 0.071 12.6 2.1 1.1 1 0 0 1 1 1 0 MDM2-binding FeS_assembly_P PF01883.19 gi|91772193|ref|YP_564885.1| - 0.08 13.1 0.1 0.17 12.1 0.1 1.7 1 1 0 1 1 1 0 Iron-sulfur cluster assembly protein PAXX PF15384.6 gi|91772193|ref|YP_564885.1| - 2.4 7.8 9.4 0.42 10.3 2.2 2.1 1 1 1 2 2 2 0 PAXX, PAralog of XRCC4 and XLF, also called C9orf142 Ribosomal_S19e PF01090.19 gi|91772194|ref|YP_564886.1| - 4.9e-57 191.5 0.0 5.6e-57 191.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Adenylsucc_synt PF00709.21 gi|91772195|ref|YP_564887.1| - 1.8e-163 544.4 0.0 2e-163 544.2 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Hexapep PF00132.24 gi|91772196|ref|YP_564888.1| - 2.2e-30 103.2 25.8 3.9e-08 32.7 3.5 5.4 4 1 0 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|91772196|ref|YP_564888.1| - 3.1e-17 62.0 28.4 2.1e-06 27.3 7.1 5.6 5 1 0 5 5 5 5 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.13 gi|91772196|ref|YP_564888.1| - 0.069 13.4 0.6 0.069 13.4 0.6 2.5 3 0 0 3 3 3 0 Polymer-forming cytoskeletal DUF3686 PF12458.8 gi|91772196|ref|YP_564888.1| - 0.13 10.7 0.2 0.18 10.3 0.2 1.2 1 0 0 1 1 1 0 ATPase involved in DNA repair DegT_DnrJ_EryC1 PF01041.17 gi|91772197|ref|YP_564889.1| - 1.6e-138 462.0 0.2 1.8e-138 461.8 0.2 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|91772197|ref|YP_564889.1| - 6.5e-07 28.2 0.1 1e-06 27.5 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|91772197|ref|YP_564889.1| - 8.4e-07 28.6 0.8 3.7e-06 26.4 0.8 1.8 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|91772197|ref|YP_564889.1| - 4.4e-06 25.9 0.9 1.5e-05 24.1 0.9 1.8 1 1 0 1 1 1 1 Aminotransferase class-V GFO_IDH_MocA PF01408.22 gi|91772198|ref|YP_564890.1| - 2.6e-29 102.5 0.4 5.4e-29 101.5 0.4 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|91772198|ref|YP_564890.1| - 3.1e-05 24.0 0.0 5.4e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain F420_oxidored PF03807.17 gi|91772198|ref|YP_564890.1| - 3.4e-05 24.4 0.1 7.3e-05 23.3 0.1 1.7 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|91772198|ref|YP_564890.1| - 9e-05 22.6 0.4 0.0023 18.0 0.1 2.4 1 1 1 2 2 2 1 Shikimate / quinate 5-dehydrogenase DapB_N PF01113.20 gi|91772198|ref|YP_564890.1| - 0.00011 22.3 3.2 0.0017 18.5 0.9 2.7 2 1 1 3 3 3 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_2 PF03446.15 gi|91772198|ref|YP_564890.1| - 0.00017 21.8 1.1 0.00053 20.2 1.1 1.9 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase CoA_binding PF02629.19 gi|91772198|ref|YP_564890.1| - 0.0015 19.2 0.6 0.0046 17.6 0.6 1.8 1 0 0 1 1 1 1 CoA binding domain 2-Hacid_dh_C PF02826.19 gi|91772198|ref|YP_564890.1| - 0.0026 17.2 0.3 0.0076 15.6 0.1 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|91772198|ref|YP_564890.1| - 0.042 13.2 2.2 0.12 11.7 1.2 2.1 2 1 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain OCD_Mu_crystall PF02423.15 gi|91772198|ref|YP_564890.1| - 0.049 12.6 0.2 0.084 11.8 0.2 1.4 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family Rota_VP4_MID PF17477.2 gi|91772198|ref|YP_564890.1| - 0.05 13.0 0.1 0.082 12.3 0.1 1.3 1 0 0 1 1 1 0 Rotavirus VP4 membrane interaction domain Gp_dh_N PF00044.24 gi|91772198|ref|YP_564890.1| - 0.051 13.9 0.1 0.14 12.5 0.1 1.9 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|91772198|ref|YP_564890.1| - 0.11 13.0 1.0 0.82 10.1 1.0 2.2 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain VanZ PF04892.12 gi|91772199|ref|YP_564891.1| - 7.4e-17 62.2 2.5 9.8e-17 61.8 2.5 1.1 1 0 0 1 1 1 1 VanZ like family DUF2238 PF09997.9 gi|91772199|ref|YP_564891.1| - 0.022 14.6 0.0 0.043 13.6 0.0 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2238) Pox_A9 PF04835.12 gi|91772199|ref|YP_564891.1| - 9 6.5 7.1 5.4 7.2 0.0 2.8 3 0 0 3 3 3 0 A9 protein conserved region Glycos_transf_4 PF00953.21 gi|91772200|ref|YP_564892.1| - 6.3e-26 91.3 15.8 6.3e-26 91.3 15.8 2.0 3 0 0 3 3 3 1 Glycosyl transferase family 4 SHP PF03579.13 gi|91772200|ref|YP_564892.1| - 0.95 9.5 7.1 0.18 11.8 1.7 2.6 2 0 0 2 2 2 0 Small hydrophobic protein Cohesin PF00963.18 gi|91772201|ref|YP_564893.1| - 7.2e-10 39.2 6.2 1.9e-09 37.9 6.2 1.8 1 0 0 1 1 1 1 Cohesin domain TPR_1 PF00515.28 gi|91772202|ref|YP_564894.1| - 1.6e-14 53.0 4.5 1.1e-05 25.0 0.1 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|91772202|ref|YP_564894.1| - 1.5e-11 43.4 2.2 0.0003 20.7 0.1 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|91772202|ref|YP_564894.1| - 1.1e-09 37.8 2.6 0.0018 18.3 0.2 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|91772202|ref|YP_564894.1| - 1.4e-07 31.0 0.0 0.0003 20.6 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 gi|91772202|ref|YP_564894.1| - 4.5e-07 29.8 0.1 0.0026 18.0 0.1 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|91772202|ref|YP_564894.1| - 5.6e-07 29.8 0.0 0.0061 16.8 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|91772202|ref|YP_564894.1| - 1.7e-05 25.3 0.5 0.12 12.9 0.0 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|91772202|ref|YP_564894.1| - 2.8e-05 24.6 0.0 0.76 10.8 0.0 3.3 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|91772202|ref|YP_564894.1| - 5.5e-05 23.2 0.0 0.032 14.4 0.0 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|91772202|ref|YP_564894.1| - 0.00011 22.6 0.5 0.41 11.4 0.1 2.8 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|91772202|ref|YP_564894.1| - 0.00032 21.3 0.0 0.00059 20.4 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 gi|91772202|ref|YP_564894.1| - 0.00052 19.8 0.9 0.0038 17.0 0.1 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|91772202|ref|YP_564894.1| - 0.0007 19.2 1.0 0.0066 16.1 0.0 3.0 3 1 1 4 4 4 1 TPR repeat Fis1_TPR_C PF14853.6 gi|91772202|ref|YP_564894.1| - 0.0095 16.0 2.8 0.13 12.3 0.4 2.8 3 0 0 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat HTH_24 PF13412.6 gi|91772203|ref|YP_564895.1| - 1.9e-05 24.1 0.0 3.1e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 gi|91772203|ref|YP_564895.1| - 0.003 17.2 0.0 0.0053 16.4 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 GntR PF00392.21 gi|91772203|ref|YP_564895.1| - 0.0078 15.8 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 gi|91772203|ref|YP_564895.1| - 0.015 15.2 0.0 0.018 14.9 0.0 1.1 1 0 0 1 1 1 0 MarR family Sigma70_r4 PF04545.16 gi|91772203|ref|YP_564895.1| - 0.044 13.3 0.0 0.091 12.3 0.0 1.6 1 1 0 1 1 1 0 Sigma-70, region 4 DUF3741 PF12552.8 gi|91772204|ref|YP_564896.1| - 0.0069 16.3 1.9 0.038 14.0 0.0 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF3741) Poxvirus PF06227.12 gi|91772204|ref|YP_564896.1| - 0.035 13.9 0.4 0.054 13.3 0.4 1.3 1 0 0 1 1 1 0 dsDNA Poxvirus ThiF PF00899.21 gi|91772205|ref|YP_564897.1| - 3.8e-61 206.6 0.0 5e-61 206.2 0.0 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 gi|91772205|ref|YP_564897.1| - 0.00014 22.1 0.1 0.00033 20.9 0.1 1.8 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 gi|91772205|ref|YP_564897.1| - 0.0068 16.5 0.1 0.021 14.9 0.0 1.9 2 1 1 3 3 3 1 Shikimate / quinate 5-dehydrogenase PglD_N PF17836.1 gi|91772205|ref|YP_564897.1| - 0.075 13.7 0.1 0.15 12.7 0.1 1.6 1 0 0 1 1 1 0 PglD N-terminal domain UDPG_MGDP_dh_N PF03721.14 gi|91772205|ref|YP_564897.1| - 0.13 11.8 0.1 0.2 11.2 0.1 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF772 PF05598.11 gi|91772206|ref|YP_564898.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91772206|ref|YP_564898.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91772206|ref|YP_564898.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91772206|ref|YP_564898.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91772206|ref|YP_564898.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease Proton_antipo_M PF00361.20 gi|91772207|ref|YP_564899.1| - 5.1e-70 236.0 18.9 5.1e-70 236.0 18.9 2.8 3 0 0 3 3 3 1 Proton-conducting membrane transporter DUF4040 PF13244.6 gi|91772207|ref|YP_564899.1| - 1.1e-18 67.1 8.2 1.1e-18 67.1 8.2 3.6 3 0 0 3 3 3 1 Domain of unknown function (DUF4040) Proton_antipo_N PF00662.20 gi|91772207|ref|YP_564899.1| - 3.3e-09 36.7 1.1 3.3e-09 36.7 1.1 4.2 4 0 0 4 4 4 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MnhB PF04039.13 gi|91772208|ref|YP_564900.1| - 1.8e-32 112.3 12.0 2e-32 112.1 12.0 1.0 1 0 0 1 1 1 1 Domain related to MnhB subunit of Na+/H+ antiporter Oxidored_q2 PF00420.24 gi|91772209|ref|YP_564901.1| - 8.2e-36 121.8 5.0 1.1e-35 121.4 5.0 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Proton_antipo_M PF00361.20 gi|91772210|ref|YP_564902.1| - 1.6e-69 234.3 29.5 1.6e-69 234.3 29.5 2.9 2 1 1 3 3 3 1 Proton-conducting membrane transporter NADHdeh_related PF10125.9 gi|91772210|ref|YP_564902.1| - 1.4e-05 24.5 7.4 1.4e-05 24.5 7.4 2.6 2 0 0 2 2 2 2 NADH dehydrogenase I, subunit N related protein Proton_antipo_N PF00662.20 gi|91772210|ref|YP_564902.1| - 0.0013 18.8 0.5 0.0013 18.8 0.5 3.5 6 0 0 6 6 6 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MNHE PF01899.16 gi|91772211|ref|YP_564903.1| - 1.4e-43 148.2 0.0 1.6e-43 148.0 0.0 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit MrpF_PhaF PF04066.13 gi|91772212|ref|YP_564904.1| - 6.1e-20 71.4 5.5 6.1e-20 71.4 5.5 1.9 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) DUF2393 PF09624.10 gi|91772212|ref|YP_564904.1| - 0.065 13.2 1.4 0.065 13.2 1.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2393) PhaG_MnhG_YufB PF03334.14 gi|91772213|ref|YP_564905.1| - 2.1e-25 88.8 9.9 2.6e-25 88.5 9.9 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter subunit Sua5_yciO_yrdC PF01300.18 gi|91772214|ref|YP_564906.1| - 7.6e-60 201.5 0.0 1.5e-59 200.5 0.0 1.5 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 gi|91772214|ref|YP_564906.1| - 2.3e-31 109.1 0.0 3.9e-31 108.4 0.0 1.3 1 0 0 1 1 1 1 Putative GTP-binding controlling metal-binding DUF4077 PF13295.6 gi|91772215|ref|YP_564907.1| - 0.049 13.6 0.4 0.058 13.3 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) SRP54 PF00448.22 gi|91772216|ref|YP_564908.1| - 2.8e-69 232.7 0.0 4.7e-69 232.0 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|91772216|ref|YP_564908.1| - 2.6e-27 95.3 2.3 2.6e-27 95.3 2.3 2.3 2 0 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|91772216|ref|YP_564908.1| - 8e-23 80.5 0.9 8.1e-22 77.2 0.3 2.6 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain cobW PF02492.19 gi|91772216|ref|YP_564908.1| - 6.2e-05 22.7 0.2 0.00081 19.0 0.2 2.2 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Zeta_toxin PF06414.12 gi|91772216|ref|YP_564908.1| - 0.00038 19.8 0.0 0.00073 18.9 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin CbiA PF01656.23 gi|91772216|ref|YP_564908.1| - 0.00059 19.9 0.0 0.0035 17.4 0.0 2.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain 6PF2K PF01591.18 gi|91772216|ref|YP_564908.1| - 0.0007 19.0 0.0 0.0012 18.2 0.0 1.3 1 0 0 1 1 1 1 6-phosphofructo-2-kinase APS_kinase PF01583.20 gi|91772216|ref|YP_564908.1| - 0.0022 17.9 0.0 0.0054 16.6 0.0 1.7 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_19 PF13245.6 gi|91772216|ref|YP_564908.1| - 0.0032 17.8 0.0 0.01 16.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|91772216|ref|YP_564908.1| - 0.0051 15.8 0.1 0.013 14.5 0.0 1.7 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 gi|91772216|ref|YP_564908.1| - 0.0064 16.3 0.0 0.018 14.8 0.0 1.8 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 gi|91772216|ref|YP_564908.1| - 0.015 15.6 0.0 0.046 14.0 0.0 1.9 2 0 0 2 2 1 0 AAA domain AAA_24 PF13479.6 gi|91772216|ref|YP_564908.1| - 0.018 14.8 0.1 0.059 13.1 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|91772216|ref|YP_564908.1| - 0.026 14.8 0.0 0.05 13.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|91772216|ref|YP_564908.1| - 0.027 14.6 0.0 0.058 13.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 gi|91772216|ref|YP_564908.1| - 0.027 14.2 0.1 0.067 12.9 0.1 1.6 1 0 0 1 1 1 0 Thymidylate kinase AAA_30 PF13604.6 gi|91772216|ref|YP_564908.1| - 0.031 14.0 0.0 0.09 12.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|91772216|ref|YP_564908.1| - 0.035 14.7 0.2 0.17 12.4 0.2 2.2 1 1 0 1 1 1 0 AAA domain MobB PF03205.14 gi|91772216|ref|YP_564908.1| - 0.037 13.9 0.1 0.071 13.0 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.6 gi|91772216|ref|YP_564908.1| - 0.049 14.1 2.4 3.5 8.1 0.4 3.3 2 1 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 gi|91772216|ref|YP_564908.1| - 0.056 12.3 0.0 0.11 11.3 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain MMR_HSR1 PF01926.23 gi|91772216|ref|YP_564908.1| - 0.072 13.2 0.3 0.71 10.0 0.3 2.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase TFIIA_gamma_N PF02268.16 gi|91772216|ref|YP_564908.1| - 0.074 13.1 0.0 0.074 13.1 0.0 2.4 3 0 0 3 3 1 0 Transcription initiation factor IIA, gamma subunit, helical domain DUF4919 PF16266.5 gi|91772216|ref|YP_564908.1| - 0.075 13.0 0.3 0.41 10.6 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4919) KTI12 PF08433.10 gi|91772216|ref|YP_564908.1| - 0.084 12.3 0.0 0.19 11.2 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_16 PF13191.6 gi|91772216|ref|YP_564908.1| - 0.09 13.1 0.1 0.24 11.8 0.0 1.8 2 0 0 2 2 1 0 AAA ATPase domain LpxK PF02606.14 gi|91772216|ref|YP_564908.1| - 0.091 11.8 0.1 0.16 11.0 0.1 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_5 PF07728.14 gi|91772216|ref|YP_564908.1| - 0.1 12.6 0.3 1.5 8.8 0.0 2.7 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) PRK PF00485.18 gi|91772216|ref|YP_564908.1| - 0.12 12.1 0.0 0.27 10.9 0.0 1.6 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family DUF2072 PF09845.9 gi|91772217|ref|YP_564909.1| - 5e-47 159.5 0.3 6.6e-47 159.1 0.3 1.1 1 0 0 1 1 1 1 Zn-ribbon containing protein Prok-RING_1 PF14446.6 gi|91772217|ref|YP_564909.1| - 0.059 13.3 0.7 0.11 12.4 0.7 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Zn-ribbon_8 PF09723.10 gi|91772217|ref|YP_564909.1| - 0.087 13.0 1.2 0.19 11.9 1.2 1.5 1 0 0 1 1 1 0 Zinc ribbon domain DGC PF08859.11 gi|91772217|ref|YP_564909.1| - 0.13 12.4 0.1 0.25 11.5 0.1 1.6 1 1 0 1 1 1 0 DGC domain DUF1624 PF07786.12 gi|91772218|ref|YP_564910.1| - 5.4e-72 242.0 13.1 6.1e-72 241.8 13.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.22 gi|91772218|ref|YP_564910.1| - 2.9e-10 39.8 20.8 2.9e-06 26.6 5.2 2.3 1 1 1 2 2 2 2 Acyltransferase family OpgC_C PF10129.9 gi|91772218|ref|YP_564910.1| - 5e-05 22.3 6.8 0.00019 20.5 3.1 2.5 1 1 1 2 2 2 2 OpgC protein DUF418 PF04235.12 gi|91772218|ref|YP_564910.1| - 0.00037 20.5 2.3 0.00037 20.5 2.3 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF418) IMS PF00817.20 gi|91772219|ref|YP_564911.1| - 2.1e-48 164.1 0.1 3.7e-48 163.3 0.1 1.4 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 gi|91772219|ref|YP_564911.1| - 1.2e-16 61.4 1.1 2.2e-16 60.6 1.1 1.4 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain DUF4332 PF14229.6 gi|91772219|ref|YP_564911.1| - 1.4e-05 25.3 0.0 3.1e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) IMS_HHH PF11798.8 gi|91772219|ref|YP_564911.1| - 0.00032 20.8 0.0 0.00095 19.4 0.0 1.9 1 0 0 1 1 1 1 IMS family HHH motif Cdd1 PF11731.8 gi|91772219|ref|YP_564911.1| - 0.017 15.3 0.0 0.057 13.7 0.0 1.8 1 0 0 1 1 1 0 Pathogenicity locus HHH_5 PF14520.6 gi|91772219|ref|YP_564911.1| - 0.027 15.1 0.2 0.16 12.6 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix domain PfUIS3 PF11567.8 gi|91772219|ref|YP_564911.1| - 0.038 14.3 1.4 0.058 13.8 0.2 1.9 2 0 0 2 2 2 0 Plasmodium falciparum UIS3 membrane protein DNA_pol_lambd_f PF10391.9 gi|91772219|ref|YP_564911.1| - 0.08 12.8 0.0 0.29 11.0 0.0 2.0 1 1 0 1 1 1 0 Fingers domain of DNA polymerase lambda Ribosomal_S17e PF00833.18 gi|91772221|ref|YP_564913.1| - 4e-12 46.1 0.2 4.6e-12 45.9 0.2 1.0 1 0 0 1 1 1 1 Ribosomal S17 DHDPS PF00701.22 gi|91772222|ref|YP_564914.1| - 2.1e-99 331.9 0.5 2.4e-99 331.7 0.5 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family PA PF02225.22 gi|91772222|ref|YP_564914.1| - 0.07 13.1 0.1 0.19 11.8 0.1 1.8 1 1 0 1 1 1 0 PA domain DapB_C PF05173.14 gi|91772223|ref|YP_564915.1| - 7.9e-46 155.0 0.2 1.2e-45 154.4 0.2 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 gi|91772223|ref|YP_564915.1| - 1.4e-27 96.3 3.5 2.2e-27 95.6 3.5 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 3Beta_HSD PF01073.19 gi|91772223|ref|YP_564915.1| - 0.0041 16.2 3.5 0.089 11.8 3.5 2.1 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Cys_Met_Meta_PP PF01053.20 gi|91772223|ref|YP_564915.1| - 0.044 12.3 0.5 0.063 11.8 0.5 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme SNARE_assoc PF09335.11 gi|91772224|ref|YP_564916.1| - 2.3e-14 53.9 2.2 2.3e-14 53.9 2.2 1.8 2 0 0 2 2 2 1 SNARE associated Golgi protein DUF3392 PF11872.8 gi|91772224|ref|YP_564916.1| - 1.6 9.0 7.4 0.42 10.9 1.2 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3392) DUF4029 PF13221.6 gi|91772224|ref|YP_564916.1| - 4 8.2 9.0 1.9 9.2 2.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4029) FlaC_arch PF05377.11 gi|91772225|ref|YP_564917.1| - 1.9 8.9 16.1 5 7.6 0.1 4.4 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) DUF1664 PF07889.12 gi|91772225|ref|YP_564917.1| - 2.7 8.0 13.2 0.86 9.6 2.9 2.8 2 2 0 2 2 2 0 Protein of unknown function (DUF1664) Lectin_N PF03954.14 gi|91772225|ref|YP_564917.1| - 4.6 7.0 9.1 0.35 10.6 0.4 2.6 2 2 0 2 2 2 0 Hepatic lectin, N-terminal domain TetR_C_37 PF18665.1 gi|91772226|ref|YP_564918.1| - 0.059 14.0 0.3 0.093 13.3 0.3 1.4 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain AlbA_2 PF04326.14 gi|91772227|ref|YP_564919.1| - 9.3e-18 64.7 0.0 1.4e-17 64.1 0.0 1.3 1 0 0 1 1 1 1 Putative DNA-binding domain DUF1279 PF06916.13 gi|91772227|ref|YP_564919.1| - 0.058 13.9 0.3 0.83 10.2 0.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1279) MnhB PF04039.13 gi|91772227|ref|YP_564919.1| - 3.9 7.8 9.9 0.75 10.1 4.0 2.2 1 1 2 3 3 3 0 Domain related to MnhB subunit of Na+/H+ antiporter PAP2_3 PF14378.6 gi|91772228|ref|YP_564920.1| - 1.4e-13 51.0 21.1 4.9e-13 49.2 21.1 1.7 1 1 0 1 1 1 1 PAP2 superfamily PAP2 PF01569.21 gi|91772228|ref|YP_564920.1| - 1.5e-09 37.7 13.9 1.5e-09 37.7 13.9 2.1 1 1 1 2 2 2 1 PAP2 superfamily DUF973 PF06157.11 gi|91772228|ref|YP_564920.1| - 0.25 10.4 7.7 0.095 11.7 4.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF973) TctB PF07331.11 gi|91772228|ref|YP_564920.1| - 6.7 7.0 18.0 0.084 13.1 3.8 2.4 2 1 0 2 2 2 0 Tripartite tricarboxylate transporter TctB family PAP2_C PF14360.6 gi|91772228|ref|YP_564920.1| - 7 7.3 16.7 0.33 11.5 9.6 2.3 2 1 1 3 3 3 0 PAP2 superfamily C-terminal Resolvase PF00239.21 gi|91772229|ref|YP_564921.1| - 1.7e-06 28.2 0.0 1.9e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Resolvase, N terminal domain SpoIIAA-like PF11964.8 gi|91772230|ref|YP_564922.1| - 3.5e-18 66.4 0.1 4e-18 66.2 0.1 1.0 1 0 0 1 1 1 1 SpoIIAA-like DDE_Tnp_1 PF01609.21 gi|91772231|ref|YP_564923.1| - 3.8e-05 23.5 1.1 6e-05 22.8 1.1 1.4 1 0 0 1 1 1 1 Transposase DDE domain TetR_C_8 PF14278.6 gi|91772231|ref|YP_564923.1| - 0.0064 16.6 4.2 0.14 12.3 0.2 2.6 2 0 0 2 2 2 2 Transcriptional regulator C-terminal region DDE_Tnp_IS66 PF03050.14 gi|91772232|ref|YP_564924.1| - 2.1e-53 181.6 1.5 4.4e-53 180.6 0.0 1.9 2 0 0 2 2 2 1 Transposase IS66 family DDE_Tnp_IS240 PF13610.6 gi|91772232|ref|YP_564924.1| - 2e-05 24.8 0.4 0.039 14.2 0.2 2.7 3 0 0 3 3 3 2 DDE domain SlyX PF04102.12 gi|91772232|ref|YP_564924.1| - 3.6e-05 24.3 0.7 0.0001 22.8 0.7 1.7 1 0 0 1 1 1 1 SlyX BST2 PF16716.5 gi|91772232|ref|YP_564924.1| - 0.19 12.3 3.6 0.21 12.2 1.4 2.2 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 PLATZ PF04640.14 gi|91772232|ref|YP_564924.1| - 0.28 11.8 3.6 0.34 11.5 0.2 2.6 2 1 1 3 3 3 0 PLATZ transcription factor DUF16 PF01519.16 gi|91772232|ref|YP_564924.1| - 0.35 11.4 4.8 0.37 11.3 0.2 2.5 3 0 0 3 3 3 0 Protein of unknown function DUF16 Dpoe2NT PF12213.8 gi|91772233|ref|YP_564925.1| - 0.026 14.8 1.2 0.026 14.8 1.2 1.9 1 1 0 1 1 1 0 DNA polymerases epsilon N terminal DUF3440 PF11922.8 gi|91772233|ref|YP_564925.1| - 0.051 13.3 0.5 0.064 13.0 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) FliS PF02561.14 gi|91772233|ref|YP_564925.1| - 0.062 13.6 1.8 0.08 13.2 1.8 1.2 1 0 0 1 1 1 0 Flagellar protein FliS DUF1192 PF06698.11 gi|91772233|ref|YP_564925.1| - 0.23 11.5 4.6 12 6.0 2.9 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1192) DUF2120 PF09893.9 gi|91772233|ref|YP_564925.1| - 0.28 11.3 7.1 0.35 11.0 7.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) FlaC_arch PF05377.11 gi|91772233|ref|YP_564925.1| - 1 9.8 9.0 0.81 10.1 1.4 2.9 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) Methyltransf_25 PF13649.6 gi|91772234|ref|YP_564926.1| - 6.7e-21 74.8 0.1 1.3e-20 73.9 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|91772234|ref|YP_564926.1| - 2.5e-20 72.9 0.0 4.5e-20 72.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91772234|ref|YP_564926.1| - 3.1e-20 72.5 0.0 4.1e-20 72.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|91772234|ref|YP_564926.1| - 1.1e-12 47.9 0.0 1.8e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|91772234|ref|YP_564926.1| - 6.7e-11 42.8 0.0 1.2e-10 42.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91772234|ref|YP_564926.1| - 4.3e-10 39.7 0.0 6.2e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|91772234|ref|YP_564926.1| - 2.3e-05 24.3 0.0 5e-05 23.2 0.0 1.5 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|91772234|ref|YP_564926.1| - 2.8e-05 23.6 0.0 4.2e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase UPF0020 PF01170.18 gi|91772234|ref|YP_564926.1| - 0.00059 19.6 0.0 0.0014 18.3 0.0 1.5 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 Methyltransf_18 PF12847.7 gi|91772234|ref|YP_564926.1| - 0.00069 19.6 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|91772234|ref|YP_564926.1| - 0.0024 17.1 0.0 0.0034 16.6 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase MTS PF05175.14 gi|91772234|ref|YP_564926.1| - 0.0035 16.9 0.0 0.0049 16.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain TPMT PF05724.11 gi|91772234|ref|YP_564926.1| - 0.0048 16.6 0.1 0.008 15.9 0.1 1.4 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_24 PF13578.6 gi|91772234|ref|YP_564926.1| - 0.0067 17.4 0.0 0.016 16.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|91772234|ref|YP_564926.1| - 0.012 15.1 0.0 0.017 14.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_8 PF05148.15 gi|91772234|ref|YP_564926.1| - 0.014 15.2 0.0 0.025 14.4 0.0 1.4 1 1 0 1 1 1 0 Hypothetical methyltransferase TehB PF03848.14 gi|91772234|ref|YP_564926.1| - 0.025 14.0 0.0 0.037 13.4 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Eno-Rase_NADH_b PF12242.8 gi|91772234|ref|YP_564926.1| - 0.094 12.5 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Methyltransf_32 PF13679.6 gi|91772234|ref|YP_564926.1| - 0.11 12.5 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain HTH_20 PF12840.7 gi|91772235|ref|YP_564927.1| - 3.9e-11 42.8 0.0 5.5e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|91772235|ref|YP_564927.1| - 5.3e-08 32.6 0.1 8.4e-08 32.0 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|91772235|ref|YP_564927.1| - 2.2e-05 24.3 0.3 4.2e-05 23.4 0.3 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|91772235|ref|YP_564927.1| - 3.1e-05 24.1 0.1 5.4e-05 23.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HxlR PF01638.17 gi|91772235|ref|YP_564927.1| - 0.0003 20.6 0.1 0.00054 19.8 0.1 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix TrmB PF01978.19 gi|91772235|ref|YP_564927.1| - 0.001 18.9 0.0 0.0016 18.3 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|91772235|ref|YP_564927.1| - 0.0012 18.7 0.0 0.0018 18.1 0.0 1.2 1 0 0 1 1 1 1 MarR family PadR PF03551.14 gi|91772235|ref|YP_564927.1| - 0.0046 16.9 0.0 0.007 16.3 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF3116 PF11313.8 gi|91772235|ref|YP_564927.1| - 0.0052 16.6 0.2 0.01 15.7 0.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3116) HTH_27 PF13463.6 gi|91772235|ref|YP_564927.1| - 0.0087 16.5 0.1 0.013 15.9 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|91772235|ref|YP_564927.1| - 0.0099 15.8 0.6 0.017 15.1 0.6 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix FtsX PF02687.21 gi|91772235|ref|YP_564927.1| - 0.047 14.2 2.0 0.075 13.5 2.0 1.3 1 0 0 1 1 1 0 FtsX-like permease family PH_12 PF16457.5 gi|91772235|ref|YP_564927.1| - 0.047 14.2 0.2 0.081 13.4 0.2 1.4 1 1 0 1 1 1 0 Pleckstrin homology domain DUF2513 PF10711.9 gi|91772235|ref|YP_564927.1| - 0.078 13.3 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) PepSY PF03413.19 gi|91772236|ref|YP_564928.1| - 4.8e-05 23.8 1.9 0.3 11.7 0.2 4.2 3 2 0 3 3 3 2 Peptidase propeptide and YPEB domain DUF1248 PF06852.12 gi|91772236|ref|YP_564928.1| - 0.022 14.3 0.1 0.048 13.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1248) DUF2028 PF09667.10 gi|91772237|ref|YP_564929.1| - 0.11 12.4 2.9 0.14 12.1 1.8 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF2028) Radical_SAM PF04055.21 gi|91772239|ref|YP_564931.1| - 9.1e-15 55.4 0.2 3.2e-14 53.6 0.1 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|91772239|ref|YP_564931.1| - 2.9e-09 37.1 0.2 8.1e-09 35.6 0.2 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|91772239|ref|YP_564931.1| - 6.2e-09 36.3 0.1 1.3e-08 35.2 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|91772239|ref|YP_564931.1| - 2.6e-06 27.8 0.4 6.8e-05 23.3 0.0 3.1 2 1 1 3 3 3 1 Iron-sulfur cluster-binding domain Abhydrolase_1 PF00561.20 gi|91772240|ref|YP_564932.1| - 5.4e-12 45.9 0.1 4e-06 26.7 0.0 2.6 2 1 0 2 2 2 2 alpha/beta hydrolase fold Ndr PF03096.14 gi|91772240|ref|YP_564932.1| - 0.0099 14.6 0.2 0.019 13.7 0.2 1.7 1 1 0 1 1 1 1 Ndr family Abhydrolase_6 PF12697.7 gi|91772240|ref|YP_564932.1| - 0.062 13.9 0.0 0.34 11.5 0.0 2.0 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF915 PF06028.11 gi|91772240|ref|YP_564932.1| - 0.072 12.4 0.8 5 6.4 0.1 2.7 2 1 1 3 3 3 0 Alpha/beta hydrolase of unknown function (DUF915) Hydrolase_4 PF12146.8 gi|91772240|ref|YP_564932.1| - 0.1 11.9 0.0 0.19 10.9 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 AAA_15 PF13175.6 gi|91772241|ref|YP_564933.1| - 1e-33 117.6 17.7 4.4e-33 115.5 17.7 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|91772241|ref|YP_564933.1| - 6.7e-17 62.2 5.9 4.7e-11 43.1 0.3 2.5 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF3696 PF12476.8 gi|91772241|ref|YP_564933.1| - 2.3e-07 31.1 0.2 5.1e-07 30.0 0.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3696) AAA_23 PF13476.6 gi|91772241|ref|YP_564933.1| - 5.7e-07 30.2 2.1 1.6e-06 28.8 2.1 1.9 1 1 0 1 1 1 1 AAA domain G-alpha PF00503.20 gi|91772241|ref|YP_564933.1| - 5.5e-06 25.8 0.0 1.2e-05 24.7 0.0 1.5 1 1 0 1 1 1 1 G-protein alpha subunit SMC_N PF02463.19 gi|91772241|ref|YP_564933.1| - 1e-05 25.1 0.7 2.1e-05 24.1 0.7 1.6 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91772241|ref|YP_564933.1| - 0.00091 18.9 0.1 0.0022 17.7 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|91772241|ref|YP_564933.1| - 0.0074 15.9 0.1 0.012 15.3 0.1 1.3 1 0 0 1 1 1 1 AAA domain DUF2813 PF11398.8 gi|91772241|ref|YP_564933.1| - 0.0086 15.4 1.2 0.17 11.1 0.1 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF2813) TPP_enzyme_N PF02776.18 gi|91772243|ref|YP_564935.1| - 2.3e-52 177.1 0.0 1.8e-51 174.2 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|91772243|ref|YP_564935.1| - 7.6e-38 129.7 0.1 2e-37 128.3 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|91772243|ref|YP_564935.1| - 3.8e-32 110.9 0.1 1.1e-31 109.4 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain Aldedh PF00171.22 gi|91772244|ref|YP_564936.1| - 4.6e-144 480.4 0.1 5.2e-144 480.2 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family B-block_TFIIIC PF04182.12 gi|91772245|ref|YP_564937.1| - 8.1e-07 29.1 0.3 1.1e-06 28.7 0.3 1.1 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR PF01047.22 gi|91772245|ref|YP_564937.1| - 6e-05 22.9 0.1 8.5e-05 22.4 0.1 1.2 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|91772245|ref|YP_564937.1| - 0.0031 17.4 0.0 0.0048 16.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|91772245|ref|YP_564937.1| - 0.0047 16.5 0.7 0.0065 16.0 0.7 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TFIIE_alpha PF02002.17 gi|91772245|ref|YP_564937.1| - 0.0062 16.4 0.2 0.0079 16.0 0.2 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_micro PF17007.5 gi|91772245|ref|YP_564937.1| - 0.025 13.4 0.1 0.03 13.1 0.1 1.0 1 0 0 1 1 1 0 HTH-like HTH_27 PF13463.6 gi|91772245|ref|YP_564937.1| - 0.046 14.2 0.0 0.065 13.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain TrmB PF01978.19 gi|91772245|ref|YP_564937.1| - 0.057 13.3 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB LSM PF01423.22 gi|91772246|ref|YP_564938.1| - 9.4e-19 66.9 0.2 1e-18 66.8 0.2 1.0 1 0 0 1 1 1 1 LSM domain DUF3467 PF11950.8 gi|91772247|ref|YP_564939.1| - 1.1e-17 64.0 0.0 1.3e-17 63.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3467) DEAD PF00270.29 gi|91772248|ref|YP_564940.1| - 6.2e-24 84.7 0.0 1.4e-23 83.6 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|91772248|ref|YP_564940.1| - 3.6e-16 59.5 0.1 1.6e-15 57.4 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|91772248|ref|YP_564940.1| - 2e-09 37.7 0.1 5.5e-09 36.3 0.1 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 gi|91772248|ref|YP_564940.1| - 0.0015 17.3 0.0 0.0021 16.8 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain APO_RNA-bind PF05634.11 gi|91772248|ref|YP_564940.1| - 0.07 12.5 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 APO RNA-binding ATPase PF06745.13 gi|91772249|ref|YP_564941.1| - 0.001 18.5 0.1 0.0024 17.3 0.1 1.6 1 1 0 1 1 1 1 KaiC Lipoprotein_9 PF03180.14 gi|91772249|ref|YP_564941.1| - 0.0061 15.7 0.6 0.01 15.0 0.6 1.3 1 0 0 1 1 1 1 NLPA lipoprotein PAXNEB PF05625.11 gi|91772249|ref|YP_564941.1| - 0.023 13.9 0.0 0.035 13.2 0.0 1.3 1 0 0 1 1 1 0 PAXNEB protein PNP_UDP_1 PF01048.20 gi|91772250|ref|YP_564942.1| - 9.3e-37 126.5 0.2 9.6e-37 126.5 0.2 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DUF373 PF04123.13 gi|91772251|ref|YP_564943.1| - 2e-120 402.3 8.3 2.3e-120 402.1 8.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) NusG_add PF18298.1 gi|91772251|ref|YP_564943.1| - 0.03 14.5 0.1 0.06 13.6 0.1 1.6 1 0 0 1 1 1 0 NusG additional domain MAF_flag10 PF01973.18 gi|91772252|ref|YP_564944.1| - 4.5e-31 107.8 0.1 5.6e-31 107.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 ACP_syn_III PF08545.10 gi|91772252|ref|YP_564944.1| - 0.025 14.4 0.1 0.05 13.5 0.1 1.6 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TPK_catalytic PF04263.16 gi|91772252|ref|YP_564944.1| - 0.038 14.0 0.1 0.063 13.3 0.1 1.3 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain tRNA-synt_1 PF00133.22 gi|91772253|ref|YP_564945.1| - 2e-198 660.5 4.1 2.2e-198 660.3 3.3 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|91772253|ref|YP_564945.1| - 5.3e-33 114.1 0.4 1.6e-32 112.6 0.4 1.9 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|91772253|ref|YP_564945.1| - 2.4e-26 92.4 7.5 2.3e-12 46.4 0.3 4.0 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|91772253|ref|YP_564945.1| - 4.7e-06 26.2 0.0 2.4e-05 23.8 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|91772253|ref|YP_564945.1| - 0.0031 16.5 0.2 0.04 12.8 0.0 2.5 3 0 0 3 3 3 1 tRNA synthetases class I (K) Thioredoxin PF00085.20 gi|91772253|ref|YP_564945.1| - 0.084 12.9 0.2 0.42 10.6 0.0 2.3 3 0 0 3 3 3 0 Thioredoxin Fer4_14 PF13394.6 gi|91772254|ref|YP_564946.1| - 5e-05 23.4 0.0 0.00011 22.3 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|91772254|ref|YP_564946.1| - 0.00021 21.6 0.0 0.00039 20.7 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|91772254|ref|YP_564946.1| - 0.00031 21.2 0.0 0.0013 19.1 0.0 2.0 1 1 0 1 1 1 1 Radical SAM superfamily Colicin_Pyocin PF01320.18 gi|91772254|ref|YP_564946.1| - 0.019 15.0 0.4 5.6 7.1 0.0 3.0 4 0 0 4 4 4 0 Colicin immunity protein / pyocin immunity protein Sigma54_CBD PF04963.13 gi|91772254|ref|YP_564946.1| - 0.077 12.8 0.1 0.25 11.2 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 factor, core binding domain PUA PF01472.20 gi|91772255|ref|YP_564947.1| - 5.6e-19 67.9 1.7 9.2e-19 67.2 1.7 1.3 1 0 0 1 1 1 1 PUA domain Pre-PUA PF17832.1 gi|91772255|ref|YP_564947.1| - 5.5e-05 23.8 0.3 0.00019 22.1 0.3 1.8 1 1 0 1 1 1 1 Pre-PUA-like domain UPF0113 PF03657.13 gi|91772255|ref|YP_564947.1| - 0.018 15.3 0.1 0.03 14.6 0.1 1.4 1 0 0 1 1 1 0 UPF0113 PUA domain DUF1947 PF09183.10 gi|91772255|ref|YP_564947.1| - 0.021 15.1 0.0 0.036 14.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1947) SepF PF04472.12 gi|91772256|ref|YP_564948.1| - 2.4e-12 46.9 0.7 3.4e-12 46.5 0.7 1.2 1 0 0 1 1 1 1 Cell division protein SepF Transposase_31 PF04754.12 gi|91772256|ref|YP_564948.1| - 0.0071 16.0 0.1 0.0087 15.7 0.1 1.1 1 0 0 1 1 1 1 Putative transposase, YhgA-like zf-ZPR1 PF03367.13 gi|91772257|ref|YP_564949.1| - 6.1e-37 126.9 0.0 9.1e-37 126.4 0.0 1.3 1 0 0 1 1 1 1 ZPR1 zinc-finger domain DUF2321 PF10083.9 gi|91772257|ref|YP_564949.1| - 0.12 12.0 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) DUF3943 PF13084.6 gi|91772257|ref|YP_564949.1| - 0.15 11.9 0.1 8.9 6.2 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3943) tRNA-synt_2b PF00587.25 gi|91772258|ref|YP_564950.1| - 1.9e-26 93.1 0.0 3e-26 92.5 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|91772258|ref|YP_564950.1| - 1.1e-21 76.8 0.0 2e-21 75.9 0.0 1.4 1 0 0 1 1 1 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|91772258|ref|YP_564950.1| - 2.8e-15 56.3 0.1 1.2e-14 54.2 0.0 2.1 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal ProRS-C_2 PF09181.10 gi|91772258|ref|YP_564950.1| - 0.15 12.2 0.0 0.52 10.5 0.0 1.9 1 0 0 1 1 1 0 Prolyl-tRNA synthetase, C-terminal VirD1 PF07328.11 gi|91772259|ref|YP_564951.1| - 0.14 12.1 0.1 9.1 6.2 0.0 2.3 2 0 0 2 2 2 0 T-DNA border endonuclease VirD1 Ribosomal_L15e PF00827.17 gi|91772260|ref|YP_564952.1| - 8.3e-84 280.1 11.2 9.4e-84 279.9 11.2 1.0 1 0 0 1 1 1 1 Ribosomal L15 FXMRP1_C_core PF12235.8 gi|91772260|ref|YP_564952.1| - 0.25 12.0 10.9 0.1 13.3 2.6 2.1 2 0 0 2 2 2 0 Fragile X-related 1 protein core C terminal RNA_binding PF01877.17 gi|91772261|ref|YP_564953.1| - 2.7e-34 118.0 0.0 3.2e-34 117.7 0.0 1.0 1 0 0 1 1 1 1 RNA binding RNase_P_p30 PF01876.16 gi|91772262|ref|YP_564954.1| - 4.5e-49 166.8 0.0 5.5e-49 166.5 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit p30 SelB-wing_3 PF09107.11 gi|91772262|ref|YP_564954.1| - 0.019 14.6 0.0 0.036 13.7 0.0 1.4 1 0 0 1 1 1 0 Elongation factor SelB, winged helix Staphostatin_A PF09022.10 gi|91772262|ref|YP_564954.1| - 0.13 12.1 0.0 0.93 9.4 0.0 2.0 2 0 0 2 2 2 0 Staphostatin A Amidohydro_2 PF04909.14 gi|91772262|ref|YP_564954.1| - 0.14 12.0 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Amidohydrolase RNase_P_Rpp14 PF01900.19 gi|91772263|ref|YP_564955.1| - 1.6e-16 60.4 0.0 1.9e-16 60.1 0.0 1.1 1 0 0 1 1 1 1 Rpp14/Pop5 family Proteasome PF00227.26 gi|91772264|ref|YP_564956.1| - 1.7e-59 200.5 0.5 2.4e-59 200.0 0.5 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|91772264|ref|YP_564956.1| - 1.4e-14 53.4 0.5 4.4e-14 51.8 0.1 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature SBDS PF01172.18 gi|91772265|ref|YP_564957.1| - 2.3e-23 82.0 0.2 3.7e-23 81.4 0.2 1.3 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|91772265|ref|YP_564957.1| - 1.8e-21 76.3 0.0 2.5e-21 75.8 0.0 1.2 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 gi|91772265|ref|YP_564957.1| - 0.084 12.9 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Elongation factor G C-terminus ECR1_N PF14382.6 gi|91772266|ref|YP_564958.1| - 2.4e-09 36.8 0.0 5.3e-09 35.7 0.0 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region KH_6 PF15985.5 gi|91772266|ref|YP_564958.1| - 6.1e-09 36.1 0.4 1.2e-08 35.1 0.4 1.6 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|91772266|ref|YP_564958.1| - 6.5e-05 22.7 0.4 0.00015 21.6 0.4 1.6 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 gi|91772266|ref|YP_564958.1| - 0.00011 22.0 0.3 0.00032 20.4 0.3 1.9 1 1 0 1 1 1 1 KH domain S1 PF00575.23 gi|91772266|ref|YP_564958.1| - 0.0008 19.7 0.2 0.0023 18.2 0.2 1.8 1 0 0 1 1 1 1 S1 RNA binding domain DUF759 PF05537.11 gi|91772266|ref|YP_564958.1| - 0.0054 15.7 0.2 0.0075 15.2 0.2 1.2 1 0 0 1 1 1 1 Borrelia burgdorferi protein of unknown function (DUF759) RNase_PH PF01138.21 gi|91772267|ref|YP_564959.1| - 1.7e-30 106.2 0.0 3.5e-30 105.2 0.0 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|91772267|ref|YP_564959.1| - 1.6e-17 63.3 0.3 3.2e-17 62.3 0.3 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Big_2 PF02368.18 gi|91772267|ref|YP_564959.1| - 0.086 12.7 0.1 0.21 11.5 0.1 1.6 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 2) RNase_PH PF01138.21 gi|91772268|ref|YP_564960.1| - 8.7e-29 100.7 0.0 1.4e-28 100.1 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|91772268|ref|YP_564960.1| - 5.5e-09 35.9 0.1 1.1e-08 35.0 0.1 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.19 gi|91772269|ref|YP_564961.1| - 1.3e-31 108.6 6.9 1.5e-31 108.3 6.9 1.1 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|91772269|ref|YP_564961.1| - 0.013 15.4 2.0 0.022 14.7 2.0 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain C1_1 PF00130.22 gi|91772269|ref|YP_564961.1| - 0.02 14.8 2.1 0.03 14.2 2.1 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Pestivirus_E2 PF16329.5 gi|91772269|ref|YP_564961.1| - 0.02 13.8 0.2 0.02 13.7 0.2 1.0 1 0 0 1 1 1 0 Pestivirus envelope glycoprotein E2 HalOD2 PF18547.1 gi|91772269|ref|YP_564961.1| - 0.03 14.2 1.3 0.03 14.2 1.3 2.3 1 1 1 2 2 2 0 Halobacterial output domain 2 Rep_fac-A_C PF08646.10 gi|91772269|ref|YP_564961.1| - 0.072 12.8 0.3 0.096 12.4 0.3 1.2 1 0 0 1 1 1 0 Replication factor-A C terminal domain Zn-ribbon_8 PF09723.10 gi|91772269|ref|YP_564961.1| - 0.094 12.8 0.3 13 6.0 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-H2C2_2 PF13465.6 gi|91772269|ref|YP_564961.1| - 0.52 10.8 5.4 0.55 10.8 1.0 2.3 1 1 1 2 2 2 0 Zinc-finger double domain DNA_RNApol_7kD PF03604.13 gi|91772270|ref|YP_564962.1| - 1.2e-08 34.5 8.2 1.8e-08 33.9 8.2 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|91772270|ref|YP_564962.1| - 0.00015 21.2 1.3 0.23 11.1 0.0 2.1 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 gi|91772270|ref|YP_564962.1| - 0.00084 18.7 0.8 0.0095 15.3 0.1 2.1 2 0 0 2 2 2 1 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|91772270|ref|YP_564962.1| - 0.0026 17.6 1.2 0.0035 17.2 1.2 1.3 1 1 0 1 1 1 1 Putative transposase DNA-binding domain Cys_rich_CPXG PF14255.6 gi|91772270|ref|YP_564962.1| - 0.0029 17.5 0.8 0.038 13.9 0.1 2.1 2 0 0 2 2 2 1 Cysteine-rich CPXCG TF_Zn_Ribbon PF08271.12 gi|91772270|ref|YP_564962.1| - 0.0031 17.0 1.4 0.004 16.6 1.4 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 gi|91772270|ref|YP_564962.1| - 0.0066 16.5 2.7 0.014 15.5 2.7 1.5 1 1 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|91772270|ref|YP_564962.1| - 0.0083 16.1 0.7 0.0097 15.9 0.7 1.2 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 gi|91772270|ref|YP_564962.1| - 0.011 15.4 3.9 0.033 13.9 3.9 1.7 1 1 0 1 1 1 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|91772270|ref|YP_564962.1| - 0.013 15.2 0.5 1.7 8.5 0.1 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain DZR PF12773.7 gi|91772270|ref|YP_564962.1| - 0.024 14.6 0.8 0.05 13.6 0.8 1.5 1 1 0 1 1 1 0 Double zinc ribbon Ribosomal_S27e PF01667.17 gi|91772270|ref|YP_564962.1| - 0.025 14.3 0.3 0.35 10.6 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein S27 Zn_Tnp_IS1595 PF12760.7 gi|91772270|ref|YP_564962.1| - 0.049 13.6 3.7 0.36 10.8 0.1 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Sgf11 PF08209.11 gi|91772270|ref|YP_564962.1| - 0.051 13.1 2.1 2.1 8.0 0.3 2.1 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) RNHCP PF12647.7 gi|91772270|ref|YP_564962.1| - 0.059 13.3 0.2 0.063 13.3 0.2 1.1 1 0 0 1 1 1 0 RNHCP domain TFIIS_C PF01096.18 gi|91772270|ref|YP_564962.1| - 0.074 12.9 2.0 3.4 7.6 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_4 PF13717.6 gi|91772270|ref|YP_564962.1| - 0.18 11.7 4.5 8.2 6.4 4.5 2.3 1 1 0 1 1 1 0 zinc-ribbon domain DiS_P_DiS PF06750.13 gi|91772270|ref|YP_564962.1| - 0.28 11.3 2.0 12 6.1 0.1 2.1 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain UPF0547 PF10571.9 gi|91772270|ref|YP_564962.1| - 7.4 6.8 8.2 44 4.3 8.2 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 Pcc1 PF09341.10 gi|91772272|ref|YP_564964.1| - 6.9e-08 32.5 0.0 8.1e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 Spec3 PF15795.5 gi|91772272|ref|YP_564964.1| - 0.079 13.5 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 Ectodermal ciliogenesis protein Prefoldin_2 PF01920.20 gi|91772273|ref|YP_564965.1| - 5.8e-23 80.9 20.9 6.5e-23 80.7 20.9 1.0 1 0 0 1 1 1 1 Prefoldin subunit DHR10 PF18595.1 gi|91772273|ref|YP_564965.1| - 0.016 15.2 4.3 0.016 15.2 4.3 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain FlaC_arch PF05377.11 gi|91772273|ref|YP_564965.1| - 0.097 13.1 0.5 0.097 13.1 0.5 2.6 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF4795 PF16043.5 gi|91772273|ref|YP_564965.1| - 0.12 12.0 12.6 0.17 11.5 12.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) V_ATPase_I PF01496.19 gi|91772273|ref|YP_564965.1| - 0.25 9.2 7.2 0.31 8.9 7.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family SMP_2 PF10144.9 gi|91772273|ref|YP_564965.1| - 0.37 10.4 10.5 0.48 10.1 10.5 1.1 1 0 0 1 1 1 0 Bacterial virulence factor haemolysin DUF16 PF01519.16 gi|91772273|ref|YP_564965.1| - 0.38 11.2 14.1 1.1 9.7 1.9 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF16 DUF87 PF01935.17 gi|91772273|ref|YP_564965.1| - 0.47 10.5 4.6 0.59 10.2 4.6 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain Mod_r PF07200.13 gi|91772273|ref|YP_564965.1| - 0.48 10.5 17.0 0.62 10.2 17.0 1.2 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein CinA_KH PF18146.1 gi|91772273|ref|YP_564965.1| - 0.52 10.5 2.9 0.55 10.4 0.8 2.0 1 1 1 2 2 2 0 Damage-inducible protein CinA KH domain Nup54 PF13874.6 gi|91772273|ref|YP_564965.1| - 1 9.5 17.6 26 4.9 17.6 2.1 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 FapA PF03961.13 gi|91772273|ref|YP_564965.1| - 1.2 7.7 11.1 2 6.9 11.0 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A DUF948 PF06103.11 gi|91772273|ref|YP_564965.1| - 2.2 8.6 8.5 9.3 6.6 0.5 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) TSNAXIP1_N PF15739.5 gi|91772273|ref|YP_564965.1| - 2.3 8.6 15.5 1.1 9.6 5.7 2.1 2 0 0 2 2 2 0 Translin-associated factor X-interacting N-terminus HemX PF04375.14 gi|91772273|ref|YP_564965.1| - 3.4 6.9 23.6 4.4 6.5 10.7 2.0 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase SecD-TM1 PF13721.6 gi|91772273|ref|YP_564965.1| - 4.2 7.9 10.3 0.25 11.8 1.4 2.1 1 1 1 2 2 2 0 SecD export protein N-terminal TM region Laminin_II PF06009.12 gi|91772273|ref|YP_564965.1| - 4.2 7.4 14.1 46 4.0 14.1 2.0 1 1 0 1 1 1 0 Laminin Domain II FlxA PF14282.6 gi|91772273|ref|YP_564965.1| - 6.5 6.8 26.8 1.3 9.1 11.1 2.5 2 1 0 2 2 2 0 FlxA-like protein DUF4407 PF14362.6 gi|91772273|ref|YP_564965.1| - 7 5.9 11.3 9.3 5.5 11.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spc7 PF08317.11 gi|91772273|ref|YP_564965.1| - 7.3 5.4 19.2 23 3.7 19.3 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein DHH PF01368.20 gi|91772274|ref|YP_564966.1| - 3.4e-10 40.1 0.8 6e-10 39.3 0.8 1.4 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.19 gi|91772274|ref|YP_564966.1| - 4.2e-10 40.2 1.9 8.9e-10 39.1 1.9 1.5 1 0 0 1 1 1 1 DHHA1 domain eIF-4B PF06273.11 gi|91772274|ref|YP_564966.1| - 0.31 10.1 0.2 0.43 9.6 0.2 1.1 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B AMP-binding_C_2 PF14535.6 gi|91772275|ref|YP_564967.1| - 1.5e-31 108.6 0.7 2.8e-31 107.7 0.7 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|91772275|ref|YP_564967.1| - 7.3e-15 54.5 0.1 1.7e-14 53.3 0.0 1.6 2 0 0 2 2 2 1 AMP-binding enzyme LuxE PF04443.12 gi|91772275|ref|YP_564967.1| - 1.4e-05 24.3 0.0 0.00085 18.4 0.0 2.5 2 1 0 2 2 2 1 Acyl-protein synthetase, LuxE GH3 PF03321.13 gi|91772275|ref|YP_564967.1| - 0.0014 17.6 0.1 0.12 11.2 0.0 2.1 2 0 0 2 2 2 2 GH3 auxin-responsive promoter P5CR_dimer PF14748.6 gi|91772275|ref|YP_564967.1| - 0.039 14.2 0.0 0.07 13.4 0.0 1.4 1 0 0 1 1 1 0 Pyrroline-5-carboxylate reductase dimerisation ACT PF01842.25 gi|91772276|ref|YP_564968.1| - 2.6e-15 55.9 1.2 1.2e-06 28.1 0.1 2.5 2 1 0 2 2 2 2 ACT domain ACT_4 PF13291.6 gi|91772276|ref|YP_564968.1| - 5.8e-07 30.0 0.1 0.008 16.8 0.0 2.3 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 gi|91772276|ref|YP_564968.1| - 0.00033 20.4 0.1 0.46 10.3 0.0 2.8 2 2 0 2 2 2 2 ACT domain DUF2103 PF09876.9 gi|91772277|ref|YP_564969.1| - 8.6e-36 121.9 1.0 9.9e-36 121.7 1.0 1.0 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2103) CN_hydrolase PF00795.22 gi|91772279|ref|YP_564971.1| - 1.2e-49 169.0 0.0 1.4e-49 168.8 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Peptidase_M8 PF01457.16 gi|91772279|ref|YP_564971.1| - 0.0033 16.2 0.0 0.036 12.8 0.0 2.0 2 0 0 2 2 2 1 Leishmanolysin Dus PF01207.17 gi|91772280|ref|YP_564972.1| - 7e-09 35.2 0.9 4e-08 32.7 0.9 1.9 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|91772280|ref|YP_564972.1| - 2.8e-06 27.0 0.3 0.0002 20.9 0.1 2.2 1 1 1 2 2 2 2 Histidine biosynthesis protein IMPDH PF00478.25 gi|91772280|ref|YP_564972.1| - 7e-06 25.3 1.0 9.5e-06 24.8 1.0 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CitG PF01874.16 gi|91772281|ref|YP_564973.1| - 1.1e-74 251.6 0.0 1.3e-74 251.4 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase DUF447 PF04289.12 gi|91772282|ref|YP_564974.1| - 3e-56 190.0 0.0 3.4e-56 189.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) dCMP_cyt_deam_1 PF00383.23 gi|91772283|ref|YP_564975.1| - 2.5e-25 88.3 0.0 3.8e-25 87.7 0.0 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|91772283|ref|YP_564975.1| - 1e-21 77.1 0.0 1.2e-21 76.9 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC3 PF18771.1 gi|91772283|ref|YP_564975.1| - 0.021 14.9 0.1 0.054 13.6 0.1 1.8 1 1 0 1 1 1 0 APOBEC3 SNAD4 PF18750.1 gi|91772283|ref|YP_564975.1| - 0.043 13.9 0.0 0.073 13.2 0.0 1.3 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 DUF2162 PF09930.9 gi|91772283|ref|YP_564975.1| - 0.054 12.9 0.3 0.072 12.5 0.3 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) TPR_1 PF00515.28 gi|91772284|ref|YP_564976.1| - 1.1e-40 135.8 18.1 5.5e-09 35.5 0.3 7.3 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_2 PF07719.17 gi|91772284|ref|YP_564976.1| - 1.7e-36 121.3 18.0 2e-07 30.6 0.3 7.9 7 1 1 8 8 8 7 Tetratricopeptide repeat TPR_11 PF13414.6 gi|91772284|ref|YP_564976.1| - 7.7e-28 95.9 12.8 1.1e-07 31.4 0.0 5.6 3 2 2 5 5 5 5 TPR repeat TPR_8 PF13181.6 gi|91772284|ref|YP_564976.1| - 6.7e-24 82.1 21.2 4.6e-05 23.3 0.1 8.0 7 1 1 8 8 8 6 Tetratricopeptide repeat TPR_17 PF13431.6 gi|91772284|ref|YP_564976.1| - 3.9e-20 70.7 8.1 0.0025 18.1 0.2 7.2 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|91772284|ref|YP_564976.1| - 9e-20 70.8 19.7 0.0002 21.6 0.9 6.8 5 2 2 7 7 6 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|91772284|ref|YP_564976.1| - 2.9e-19 68.1 7.5 4.3e-05 24.0 0.0 6.9 4 3 4 8 8 7 4 Tetratricopeptide repeat TPR_16 PF13432.6 gi|91772284|ref|YP_564976.1| - 3.1e-18 66.1 1.9 5.4e-05 23.8 0.0 4.4 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|91772284|ref|YP_564976.1| - 7.1e-18 64.9 13.6 2e-05 25.0 0.1 5.5 3 2 2 5 5 5 4 Tetratricopeptide repeat TPR_9 PF13371.6 gi|91772284|ref|YP_564976.1| - 1.6e-13 50.5 0.0 9.6e-06 25.7 0.0 4.3 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|91772284|ref|YP_564976.1| - 1.4e-12 47.0 12.7 0.0095 15.8 0.2 6.8 7 0 0 7 7 7 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|91772284|ref|YP_564976.1| - 1.7e-12 47.4 11.2 4.7e-05 23.5 0.1 5.4 2 2 4 6 6 6 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|91772284|ref|YP_564976.1| - 4.3e-12 45.2 5.5 0.034 14.2 0.0 6.6 6 1 1 7 7 7 2 Tetratricopeptide repeat BTAD PF03704.17 gi|91772284|ref|YP_564976.1| - 1.1e-09 38.8 3.3 0.048 14.1 0.0 3.8 3 1 1 4 4 4 3 Bacterial transcriptional activator domain DUF3856 PF12968.7 gi|91772284|ref|YP_564976.1| - 1.6e-09 38.0 2.9 0.11 12.5 0.2 5.6 4 2 1 5 5 5 2 Domain of Unknown Function (DUF3856) SRP_TPR_like PF17004.5 gi|91772284|ref|YP_564976.1| - 6.2e-09 35.9 1.9 0.00012 22.0 0.3 4.4 1 1 3 4 4 4 3 Putative TPR-like repeat TPR_15 PF13429.6 gi|91772284|ref|YP_564976.1| - 9.3e-09 34.9 0.8 0.044 13.0 0.1 3.1 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|91772284|ref|YP_564976.1| - 1.4e-07 31.7 11.7 35 5.3 0.2 8.0 7 1 0 7 7 7 0 Tetratricopeptide repeat NARP1 PF12569.8 gi|91772284|ref|YP_564976.1| - 3.3e-07 29.6 9.3 0.32 9.8 0.4 4.9 2 2 2 5 5 5 3 NMDA receptor-regulated protein 1 TPR_4 PF07721.14 gi|91772284|ref|YP_564976.1| - 6.2e-06 26.3 0.0 15 6.6 0.0 5.4 6 0 0 6 6 4 0 Tetratricopeptide repeat MIT PF04212.18 gi|91772284|ref|YP_564976.1| - 1.6e-05 24.9 18.7 0.69 10.0 0.3 5.6 5 1 1 6 6 5 3 MIT (microtubule interacting and transport) domain TPR_3 PF07720.12 gi|91772284|ref|YP_564976.1| - 5.4e-05 23.1 0.4 11 6.2 0.0 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat RIBIOP_C PF04950.12 gi|91772284|ref|YP_564976.1| - 0.00021 20.8 0.2 0.00097 18.7 0.3 1.9 2 0 0 2 2 2 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal Fis1_TPR_C PF14853.6 gi|91772284|ref|YP_564976.1| - 0.00056 19.9 4.8 0.18 11.9 0.0 4.9 5 0 0 5 5 5 1 Fis1 C-terminal tetratricopeptide repeat ChAPs PF09295.10 gi|91772284|ref|YP_564976.1| - 0.0023 17.0 0.2 0.35 9.8 0.0 2.3 2 1 0 2 2 2 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_21 PF09976.9 gi|91772284|ref|YP_564976.1| - 0.0039 16.9 2.5 11 5.6 0.3 4.3 3 1 0 4 4 4 0 Tetratricopeptide repeat-like domain TPR_20 PF14561.6 gi|91772284|ref|YP_564976.1| - 0.0041 17.4 0.1 11 6.5 0.0 4.1 3 3 1 4 4 4 0 Tetratricopeptide repeat SRP68 PF16969.5 gi|91772284|ref|YP_564976.1| - 0.016 14.2 0.1 0.034 13.2 0.1 1.5 1 0 0 1 1 1 0 RNA-binding signal recognition particle 68 NRBF2_MIT PF17169.4 gi|91772284|ref|YP_564976.1| - 0.021 15.1 1.4 1.9 8.7 0.0 3.7 5 0 0 5 5 3 0 MIT domain of nuclear receptor-binding factor 2 PPR PF01535.20 gi|91772284|ref|YP_564976.1| - 0.022 15.0 10.2 77 3.9 0.1 6.8 6 1 2 8 8 7 0 PPR repeat Alkyl_sulf_dimr PF14863.6 gi|91772284|ref|YP_564976.1| - 0.023 15.2 0.7 1.7 9.1 0.0 3.4 1 1 2 4 4 4 0 Alkyl sulfatase dimerisation SHNi-TPR PF10516.9 gi|91772284|ref|YP_564976.1| - 0.034 13.6 1.6 32 4.1 0.2 3.8 3 0 0 3 3 3 0 SHNi-TPR Gluconate_2-dh3 PF13618.6 gi|91772284|ref|YP_564976.1| - 0.04 14.1 0.6 1.8 8.8 0.6 2.3 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 Phage_term_smal PF05944.12 gi|91772284|ref|YP_564976.1| - 0.055 13.4 0.0 0.18 11.8 0.0 2.0 1 0 0 1 1 1 0 Phage small terminase subunit TFR_dimer PF04253.15 gi|91772284|ref|YP_564976.1| - 0.087 12.9 0.2 0.26 11.4 0.2 1.8 1 0 0 1 1 1 0 Transferrin receptor-like dimerisation domain PvlArgDC PF01862.16 gi|91772284|ref|YP_564976.1| - 0.2 11.5 1.5 9 6.1 0.0 3.5 4 0 0 4 4 4 0 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) zf-CW PF07496.15 gi|91772284|ref|YP_564976.1| - 0.31 11.1 1.5 29 4.8 0.0 3.1 2 1 1 3 3 3 0 CW-type Zinc Finger HTH_Bact PF18768.1 gi|91772284|ref|YP_564976.1| - 0.96 9.1 8.7 7.1 6.3 0.1 4.8 7 0 0 7 7 4 0 Helix-turn-helix bacterial domain PAS_3 PF08447.12 gi|91772285|ref|YP_564977.1| - 4e-51 171.3 5.3 1.5e-17 63.6 0.1 3.9 3 0 0 3 3 3 3 PAS fold GAF_2 PF13185.6 gi|91772285|ref|YP_564977.1| - 3.3e-34 118.2 0.0 2.8e-20 73.0 0.0 2.4 2 0 0 2 2 2 2 GAF domain PAS PF00989.25 gi|91772285|ref|YP_564977.1| - 4.5e-19 68.5 0.5 4.6e-06 26.6 0.0 4.5 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.10 gi|91772285|ref|YP_564977.1| - 1.1e-18 67.5 0.1 0.0014 18.9 0.0 4.8 5 0 0 5 5 5 4 PAS fold PAS_9 PF13426.7 gi|91772285|ref|YP_564977.1| - 6.8e-10 39.1 1.2 0.023 15.0 0.0 4.5 4 0 0 4 4 4 3 PAS domain GAF PF01590.26 gi|91772285|ref|YP_564977.1| - 2.9e-08 34.4 0.0 0.0047 17.6 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_3 PF13492.6 gi|91772285|ref|YP_564977.1| - 2.8e-06 27.7 0.0 0.0004 20.7 0.0 2.5 2 1 0 2 2 2 1 GAF domain LicD PF04991.13 gi|91772285|ref|YP_564977.1| - 0.0056 16.9 2.2 0.81 9.8 0.1 2.9 3 0 0 3 3 3 2 LicD family PAS_8 PF13188.7 gi|91772285|ref|YP_564977.1| - 0.011 15.7 4.1 0.54 10.3 0.2 4.5 5 1 0 5 5 5 0 PAS domain SUKH_6 PF14568.6 gi|91772285|ref|YP_564977.1| - 0.34 11.3 2.6 70 3.9 0.2 3.6 3 0 0 3 3 3 0 SMI1-KNR4 cell-wall DUF2802 PF10975.8 gi|91772286|ref|YP_564978.1| - 0.16 12.1 0.0 0.29 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2802) Ribosomal_L7Ae PF01248.26 gi|91772287|ref|YP_564979.1| - 4.8e-27 93.5 1.0 5.6e-27 93.3 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|91772287|ref|YP_564979.1| - 0.001 18.9 0.0 0.0016 18.3 0.0 1.3 1 0 0 1 1 1 1 PELOTA RNA binding domain YtxH PF12732.7 gi|91772287|ref|YP_564979.1| - 0.065 13.8 4.5 4.2 8.0 0.7 2.1 2 0 0 2 2 2 0 YtxH-like protein Ribosomal_S28e PF01200.18 gi|91772288|ref|YP_564980.1| - 1.1e-27 95.7 0.4 1.2e-27 95.6 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L24e PF01246.20 gi|91772289|ref|YP_564981.1| - 5.8e-19 68.1 0.2 6.2e-19 68.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.14 gi|91772289|ref|YP_564981.1| - 8.4e-07 28.8 2.3 1.2e-06 28.3 2.3 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif YHS PF04945.13 gi|91772289|ref|YP_564981.1| - 9e-06 25.7 0.6 1.2e-05 25.2 0.6 1.2 1 0 0 1 1 1 1 YHS domain VATC PF18716.1 gi|91772289|ref|YP_564981.1| - 0.029 14.2 4.7 0.057 13.3 4.7 1.5 1 1 0 1 1 1 0 Vms1-associating treble clef domain SerH PF06873.11 gi|91772289|ref|YP_564981.1| - 0.19 10.5 0.0 0.19 10.5 0.0 1.0 1 0 0 1 1 1 0 Cell surface immobilisation antigen SerH NDK PF00334.19 gi|91772290|ref|YP_564982.1| - 1.8e-54 183.4 0.0 2e-54 183.2 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase GTP_EFTU PF00009.27 gi|91772291|ref|YP_564983.1| - 1.8e-30 105.9 0.2 8.9e-29 100.4 0.0 2.5 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain GTP_EFTU_D4 PF14578.6 gi|91772291|ref|YP_564983.1| - 1.1e-27 95.8 3.8 1.1e-27 95.8 3.8 2.7 3 0 0 3 3 3 1 Elongation factor Tu domain 4 IF-2 PF11987.8 gi|91772291|ref|YP_564983.1| - 1.2e-23 83.3 4.3 1.3e-23 83.1 1.5 2.3 2 0 0 2 2 2 1 Translation-initiation factor 2 MMR_HSR1 PF01926.23 gi|91772291|ref|YP_564983.1| - 2.1e-08 34.2 0.0 6.4e-08 32.7 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 gi|91772291|ref|YP_564983.1| - 1.2e-06 28.8 0.3 1.2e-06 28.8 0.3 3.7 4 0 0 4 4 4 1 Elongation factor Tu domain 2 ATP_bind_1 PF03029.17 gi|91772291|ref|YP_564983.1| - 0.0087 15.9 0.0 0.022 14.5 0.0 1.6 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein RsgA_GTPase PF03193.16 gi|91772291|ref|YP_564983.1| - 0.011 15.6 0.5 6 6.7 0.0 3.0 2 1 1 3 3 3 0 RsgA GTPase Dynamin_N PF00350.23 gi|91772291|ref|YP_564983.1| - 0.014 15.4 0.1 0.4 10.7 0.0 2.6 2 0 0 2 2 2 0 Dynamin family Ribosomal_S6e PF01092.19 gi|91772292|ref|YP_564984.1| - 6e-38 129.6 0.0 6.8e-38 129.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e TPR_1 PF00515.28 gi|91772293|ref|YP_564985.1| - 2.2e-59 195.0 15.7 1.7e-09 37.1 0.7 11.2 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|91772293|ref|YP_564985.1| - 1e-55 181.4 14.8 5.1e-08 32.4 0.6 11.3 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_11 PF13414.6 gi|91772293|ref|YP_564985.1| - 2.4e-41 139.1 31.8 6.1e-07 29.0 2.8 10.9 4 2 7 11 11 11 10 TPR repeat TPR_8 PF13181.6 gi|91772293|ref|YP_564985.1| - 8.1e-39 128.6 22.1 1.4e-05 24.9 0.0 11.0 11 0 0 11 11 11 7 Tetratricopeptide repeat TPR_16 PF13432.6 gi|91772293|ref|YP_564985.1| - 6.3e-38 129.1 11.4 1.1e-08 35.6 0.5 6.3 5 1 0 6 6 6 6 Tetratricopeptide repeat TPR_17 PF13431.6 gi|91772293|ref|YP_564985.1| - 3.7e-25 86.5 9.9 0.024 15.0 0.0 10.4 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|91772293|ref|YP_564985.1| - 5.1e-24 84.6 14.7 2.3e-05 24.8 3.9 6.6 3 2 4 7 7 7 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|91772293|ref|YP_564985.1| - 1.9e-23 81.1 10.3 0.016 16.0 0.1 10.2 1 1 8 10 10 10 7 Tetratricopeptide repeat TPR_12 PF13424.6 gi|91772293|ref|YP_564985.1| - 9.1e-22 77.2 21.3 6.9e-06 26.3 1.6 8.5 3 3 5 8 8 8 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|91772293|ref|YP_564985.1| - 3.9e-20 71.8 2.5 0.00026 21.1 0.1 5.9 3 3 2 6 6 6 6 Tetratricopeptide repeat TPR_6 PF13174.6 gi|91772293|ref|YP_564985.1| - 5.3e-16 58.1 17.7 0.012 16.3 0.4 9.5 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|91772293|ref|YP_564985.1| - 1.5e-13 49.7 11.3 0.052 13.6 0.1 9.0 9 1 1 10 10 9 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|91772293|ref|YP_564985.1| - 2e-11 44.0 10.1 0.00022 21.4 0.3 4.8 3 1 3 6 6 6 3 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 gi|91772293|ref|YP_564985.1| - 1.1e-07 31.8 0.8 2.8 8.1 0.1 6.0 7 0 0 7 7 6 1 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|91772293|ref|YP_564985.1| - 7.5e-06 25.6 19.3 0.042 13.7 0.2 8.2 10 0 0 10 10 10 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|91772293|ref|YP_564985.1| - 5.3e-05 22.3 1.5 0.0055 15.7 0.3 3.8 3 2 2 6 6 6 1 NMDA receptor-regulated protein 1 TPR_3 PF07720.12 gi|91772293|ref|YP_564985.1| - 0.0013 18.7 22.4 0.91 9.6 0.4 8.0 8 1 1 9 9 9 1 Tetratricopeptide repeat TPR_4 PF07721.14 gi|91772293|ref|YP_564985.1| - 0.0023 18.4 2.8 90 4.2 0.2 5.7 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_21 PF09976.9 gi|91772293|ref|YP_564985.1| - 0.0028 17.4 17.5 0.67 9.6 0.3 5.6 3 2 3 6 6 6 2 Tetratricopeptide repeat-like domain SRP_TPR_like PF17004.5 gi|91772293|ref|YP_564985.1| - 0.0033 17.4 1.5 3.3 7.7 0.0 3.9 3 1 0 3 3 3 1 Putative TPR-like repeat DUF627 PF04781.12 gi|91772293|ref|YP_564985.1| - 0.013 15.5 2.8 14 5.8 0.1 4.8 4 2 0 5 5 5 0 Protein of unknown function (DUF627) DUF3856 PF12968.7 gi|91772293|ref|YP_564985.1| - 0.019 15.1 13.9 33 4.5 0.7 6.9 2 2 2 5 5 5 0 Domain of Unknown Function (DUF3856) Alkyl_sulf_dimr PF14863.6 gi|91772293|ref|YP_564985.1| - 0.022 15.2 0.5 3.8 8.0 0.0 3.0 2 1 1 3 3 3 0 Alkyl sulfatase dimerisation MCC-bdg_PDZ PF10506.9 gi|91772293|ref|YP_564985.1| - 0.029 14.4 0.1 8 6.6 0.1 3.6 3 0 0 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome UPF0730 PF15827.5 gi|91772293|ref|YP_564985.1| - 5 6.9 6.1 1.1 9.0 0.3 2.6 2 0 0 2 2 2 0 UPF0730 unknown protein family DUF4389 PF14333.6 gi|91772294|ref|YP_564986.1| - 3.9e-19 68.3 2.7 5.3e-19 67.9 2.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4389) GIIM PF08388.11 gi|91772294|ref|YP_564986.1| - 0.11 12.5 0.2 0.19 11.8 0.2 1.3 1 0 0 1 1 1 0 Group II intron, maturase-specific domain Thioredoxin PF00085.20 gi|91772295|ref|YP_564987.1| - 1.5e-20 73.1 0.0 1.8e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|91772295|ref|YP_564987.1| - 5.6e-07 30.0 0.5 1.1e-05 25.9 0.5 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain TraF PF13728.6 gi|91772295|ref|YP_564987.1| - 0.00019 21.3 0.0 0.00023 21.1 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_7 PF13899.6 gi|91772295|ref|YP_564987.1| - 0.00096 19.3 0.1 0.0015 18.6 0.1 1.5 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.6 gi|91772295|ref|YP_564987.1| - 0.0014 19.0 0.1 0.052 13.9 0.1 2.2 1 1 1 2 2 2 2 Thioredoxin-like DSBA PF01323.20 gi|91772295|ref|YP_564987.1| - 0.032 14.0 1.2 0.53 10.0 0.0 2.1 1 1 1 2 2 2 0 DSBA-like thioredoxin domain Redoxin PF08534.10 gi|91772295|ref|YP_564987.1| - 0.037 13.7 0.0 0.044 13.5 0.0 1.2 1 0 0 1 1 1 0 Redoxin Thioredoxin_3 PF13192.6 gi|91772295|ref|YP_564987.1| - 0.04 14.0 0.0 0.058 13.4 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin domain Thioredoxin_4 PF13462.6 gi|91772295|ref|YP_564987.1| - 0.041 14.0 0.3 8.3 6.5 0.0 2.1 1 1 1 2 2 2 0 Thioredoxin AhpC-TSA PF00578.21 gi|91772295|ref|YP_564987.1| - 0.053 13.4 0.1 0.12 12.3 0.1 1.6 1 1 0 1 1 1 0 AhpC/TSA family HyaE PF07449.11 gi|91772295|ref|YP_564987.1| - 0.19 11.7 0.0 0.28 11.2 0.0 1.3 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DDE_Tnp_ISL3 PF01610.17 gi|91772296|ref|YP_564988.1| - 1.3e-70 237.8 4.3 2.3e-70 237.0 4.3 1.3 1 0 0 1 1 1 1 Transposase HTH_Tnp_ISL3 PF13542.6 gi|91772296|ref|YP_564988.1| - 2.4e-14 52.5 0.1 4.1e-14 51.7 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 zf-ISL3 PF14690.6 gi|91772296|ref|YP_564988.1| - 5.6e-11 42.9 1.3 1.5e-10 41.6 1.3 1.8 1 0 0 1 1 1 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 UPF0236 PF06782.11 gi|91772296|ref|YP_564988.1| - 0.0011 17.7 0.3 0.0026 16.5 0.2 1.6 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0236) HTH_23 PF13384.6 gi|91772296|ref|YP_564988.1| - 0.0042 16.8 0.0 0.024 14.4 0.0 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 gi|91772296|ref|YP_564988.1| - 0.056 13.5 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix DUF1673 PF07895.11 gi|91772297|ref|YP_564989.1| - 1.5e-57 195.0 8.2 2.5e-57 194.3 8.2 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) HTH_Tnp_4 PF13613.6 gi|91772298|ref|YP_564990.1| - 0.019 14.7 0.0 0.037 13.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HNHc_6 PF16784.5 gi|91772298|ref|YP_564990.1| - 0.043 13.4 0.1 0.052 13.1 0.1 1.2 1 0 0 1 1 1 0 Putative HNHc nuclease SAM_DrpA PF18255.1 gi|91772298|ref|YP_564990.1| - 0.14 12.5 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 DNA processing protein A sterile alpha motif domain HTH_24 PF13412.6 gi|91772299|ref|YP_564991.1| - 2.6e-19 68.5 0.2 7.9e-13 47.7 0.3 2.4 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|91772299|ref|YP_564991.1| - 2.9e-11 43.3 0.0 2.5e-05 24.3 0.0 2.2 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.20 gi|91772299|ref|YP_564991.1| - 2.3e-09 37.0 0.0 0.00011 22.0 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|91772299|ref|YP_564991.1| - 2.8e-06 27.2 0.0 0.0012 18.7 0.0 2.4 2 0 0 2 2 2 1 MarR family HTH_AsnC-type PF13404.6 gi|91772299|ref|YP_564991.1| - 3.3e-06 26.8 0.1 5.4e-05 22.9 0.1 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 gi|91772299|ref|YP_564991.1| - 1.1e-05 25.2 0.0 0.053 13.4 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_IclR PF09339.10 gi|91772299|ref|YP_564991.1| - 1.7e-05 24.5 0.0 0.27 11.1 0.0 2.4 2 0 0 2 2 2 2 IclR helix-turn-helix domain TrmB PF01978.19 gi|91772299|ref|YP_564991.1| - 0.00098 19.0 0.0 0.027 14.3 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_10 PF04967.12 gi|91772299|ref|YP_564991.1| - 0.0024 17.7 0.0 0.013 15.3 0.0 2.2 3 0 0 3 3 2 1 HTH DNA binding domain HTH_36 PF13730.6 gi|91772299|ref|YP_564991.1| - 0.0027 17.6 0.0 2.9 7.9 0.0 3.0 1 1 1 2 2 2 2 Helix-turn-helix domain HTH_34 PF13601.6 gi|91772299|ref|YP_564991.1| - 0.0033 17.6 0.0 1.9 8.7 0.0 2.4 2 0 0 2 2 2 1 Winged helix DNA-binding domain Penicillinase_R PF03965.16 gi|91772299|ref|YP_564991.1| - 0.0034 17.7 0.1 0.64 10.4 0.0 2.3 2 0 0 2 2 2 1 Penicillinase repressor Fe_dep_repress PF01325.19 gi|91772299|ref|YP_564991.1| - 0.0055 16.9 0.0 0.017 15.3 0.0 1.8 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 gi|91772299|ref|YP_564991.1| - 0.0077 16.2 0.0 4.7 7.2 0.0 2.8 3 0 0 3 3 3 1 HTH domain TetR_N PF00440.23 gi|91772299|ref|YP_564991.1| - 0.03 14.1 0.0 13 5.7 0.0 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family GerE PF00196.19 gi|91772299|ref|YP_564991.1| - 0.03 13.9 0.1 0.4 10.3 0.1 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family RepL PF05732.11 gi|91772299|ref|YP_564991.1| - 0.051 13.0 0.0 0.58 9.6 0.0 2.2 2 0 0 2 2 2 0 Firmicute plasmid replication protein (RepL) RP-C PF03428.13 gi|91772299|ref|YP_564991.1| - 0.06 13.0 0.0 1.1 8.9 0.0 2.1 2 0 0 2 2 2 0 Replication protein C N-terminal domain Sulfolobus_pRN PF05584.11 gi|91772299|ref|YP_564991.1| - 0.063 13.3 1.8 1.3 9.2 0.1 3.2 3 1 0 3 3 3 0 Sulfolobus plasmid regulatory protein HTH_45 PF14947.6 gi|91772299|ref|YP_564991.1| - 0.069 13.1 0.2 0.65 10.0 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix HTH_Crp_2 PF13545.6 gi|91772299|ref|YP_564991.1| - 0.11 12.5 0.2 0.37 10.8 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_38 PF13936.6 gi|91772299|ref|YP_564991.1| - 0.21 11.3 1.3 0.52 10.1 0.2 2.3 3 0 0 3 3 3 0 Helix-turn-helix domain PAP2_3 PF14378.6 gi|91772301|ref|YP_564993.1| - 1.6 8.4 13.8 5.2 6.7 13.8 1.9 1 1 0 1 1 1 0 PAP2 superfamily DUF4064 PF13273.6 gi|91772301|ref|YP_564993.1| - 6.1 7.2 8.7 14 6.1 8.7 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) E1-E2_ATPase PF00122.20 gi|91772301|ref|YP_564993.1| - 9.8 5.7 6.1 12 5.4 6.1 1.1 1 0 0 1 1 1 0 E1-E2 ATPase HTH_24 PF13412.6 gi|91772302|ref|YP_564994.1| - 9.9e-18 63.4 0.1 1.5e-09 37.3 0.1 2.3 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|91772302|ref|YP_564994.1| - 2.1e-13 49.9 0.0 1.9e-06 27.6 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|91772302|ref|YP_564994.1| - 8.9e-12 44.9 0.0 2e-05 24.5 0.0 2.2 2 0 0 2 2 2 2 Helix-turn-helix domain MarR PF01047.22 gi|91772302|ref|YP_564994.1| - 1.5e-08 34.4 0.0 5.1e-06 26.3 0.1 2.3 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|91772302|ref|YP_564994.1| - 5.4e-08 32.6 0.0 0.00021 21.1 0.0 2.2 2 0 0 2 2 2 2 MarR family HTH_27 PF13463.6 gi|91772302|ref|YP_564994.1| - 1.7e-06 28.4 0.0 6.5e-06 26.6 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain GerE PF00196.19 gi|91772302|ref|YP_564994.1| - 2.2e-06 27.1 0.5 9.8e-05 21.8 0.1 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_IclR PF09339.10 gi|91772302|ref|YP_564994.1| - 5.8e-05 22.8 0.0 0.13 12.1 0.0 2.3 2 0 0 2 2 2 2 IclR helix-turn-helix domain HTH_34 PF13601.6 gi|91772302|ref|YP_564994.1| - 0.00027 21.1 0.0 0.33 11.2 0.1 2.4 2 0 0 2 2 2 2 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|91772302|ref|YP_564994.1| - 0.0003 20.9 0.0 0.0049 17.0 0.0 2.2 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|91772302|ref|YP_564994.1| - 0.00063 19.6 0.0 1.3 9.0 0.0 2.5 3 0 0 3 3 2 2 Sugar-specific transcriptional regulator TrmB HTH_10 PF04967.12 gi|91772302|ref|YP_564994.1| - 0.0027 17.5 0.0 0.18 11.6 0.0 2.3 2 0 0 2 2 2 1 HTH DNA binding domain HTH_23 PF13384.6 gi|91772302|ref|YP_564994.1| - 0.0048 16.7 0.0 0.009 15.8 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|91772302|ref|YP_564994.1| - 0.005 16.5 0.0 1 9.1 0.0 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_11 PF08279.12 gi|91772302|ref|YP_564994.1| - 0.005 16.8 0.0 0.058 13.3 0.1 2.2 2 0 0 2 2 2 1 HTH domain HTH_40 PF14493.6 gi|91772302|ref|YP_564994.1| - 0.0056 17.1 0.1 2.4 8.7 0.0 2.3 1 1 1 2 2 2 1 Helix-turn-helix domain FaeA PF04703.12 gi|91772302|ref|YP_564994.1| - 0.0077 16.6 0.0 0.18 12.2 0.0 2.3 2 0 0 2 2 2 1 FaeA-like protein RP-C PF03428.13 gi|91772302|ref|YP_564994.1| - 0.016 14.9 0.0 0.27 10.9 0.0 2.1 2 0 0 2 2 2 0 Replication protein C N-terminal domain HTH_Crp_2 PF13545.6 gi|91772302|ref|YP_564994.1| - 0.016 15.1 0.0 0.063 13.3 0.0 1.8 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Penicillinase_R PF03965.16 gi|91772302|ref|YP_564994.1| - 0.019 15.3 0.1 0.097 13.0 0.1 1.9 1 1 1 2 2 2 0 Penicillinase repressor Sigma70_r4 PF04545.16 gi|91772302|ref|YP_564994.1| - 0.036 13.6 0.0 0.18 11.4 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_38 PF13936.6 gi|91772302|ref|YP_564994.1| - 0.04 13.7 0.0 0.28 11.0 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Tnp_IS630 PF01710.16 gi|91772302|ref|YP_564994.1| - 0.049 13.7 0.0 0.49 10.5 0.0 2.0 2 0 0 2 2 2 0 Transposase DUF2513 PF10711.9 gi|91772302|ref|YP_564994.1| - 0.058 13.7 0.2 0.52 10.6 0.0 2.1 2 0 0 2 2 2 0 Hypothetical protein (DUF2513) HTH_41 PF14502.6 gi|91772302|ref|YP_564994.1| - 0.09 12.5 0.0 0.42 10.3 0.0 2.1 3 0 0 3 3 2 0 Helix-turn-helix domain HTH_30 PF13556.6 gi|91772302|ref|YP_564994.1| - 0.13 12.0 0.0 16 5.4 0.0 2.3 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain LolA_like PF17131.4 gi|91772303|ref|YP_564995.1| - 5.4e-15 55.6 0.1 1.3e-14 54.3 0.1 1.6 1 1 1 2 2 2 1 Outer membrane lipoprotein-sorting protein MucB_RseB PF03888.14 gi|91772303|ref|YP_564995.1| - 1.1e-07 31.6 0.0 2.7e-07 30.3 0.0 1.6 1 1 0 1 1 1 1 MucB/RseB N-terminal domain DUF4367 PF14285.6 gi|91772303|ref|YP_564995.1| - 1.2e-07 32.2 1.6 4.4e-07 30.3 0.0 2.8 3 2 0 3 3 3 1 Domain of unknown function (DUF4367) LolA PF03548.15 gi|91772303|ref|YP_564995.1| - 3.4e-07 30.1 0.3 5.9e-07 29.3 0.3 1.4 1 0 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA DUF2092 PF09865.9 gi|91772303|ref|YP_564995.1| - 2.1e-05 24.0 0.1 0.0033 16.8 0.1 2.3 1 1 0 1 1 1 1 Predicted periplasmic protein (DUF2092) DUF1571 PF07608.11 gi|91772303|ref|YP_564995.1| - 0.0012 18.4 0.0 0.0024 17.3 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1571) DUF1329 PF07044.11 gi|91772303|ref|YP_564995.1| - 0.0047 16.3 0.2 0.079 12.2 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1329) DUF3394 PF11874.8 gi|91772303|ref|YP_564995.1| - 0.016 14.9 0.2 2.1 8.0 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3394) DUF4870 PF09685.10 gi|91772304|ref|YP_564996.1| - 0.015 15.4 1.9 0.023 14.8 1.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4870) FtsX PF02687.21 gi|91772304|ref|YP_564996.1| - 0.091 13.2 4.2 0.11 12.9 4.2 1.1 1 0 0 1 1 1 0 FtsX-like permease family 2TM PF13239.6 gi|91772304|ref|YP_564996.1| - 2.9 8.2 6.1 4.1 7.8 6.1 1.3 1 1 0 1 1 1 0 2TM domain NosD PF05048.13 gi|91772306|ref|YP_564998.1| - 1.9e-06 27.3 4.3 2.7e-06 26.8 4.3 1.2 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) DUF1565 PF07602.11 gi|91772306|ref|YP_564998.1| - 4.3e-05 23.0 5.0 0.03 13.7 3.7 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1565) Pectinesterase PF01095.19 gi|91772306|ref|YP_564998.1| - 0.00018 20.3 0.8 0.00023 20.0 0.8 1.2 1 0 0 1 1 1 1 Pectinesterase Beta_helix PF13229.6 gi|91772306|ref|YP_564998.1| - 0.00033 20.5 13.7 0.00087 19.2 13.8 1.8 1 1 0 1 1 1 1 Right handed beta helix region Rrp44_CSD1 PF17216.3 gi|91772306|ref|YP_564998.1| - 0.19 11.5 2.8 0.19 11.4 0.2 2.0 1 1 1 2 2 2 0 Rrp44-like cold shock domain NosD PF05048.13 gi|91772307|ref|YP_564999.1| - 2.4e-13 49.9 30.9 7.3e-13 48.3 31.0 1.7 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|91772307|ref|YP_564999.1| - 1.2e-09 38.2 41.7 2e-07 31.0 24.2 2.8 2 1 1 3 3 3 2 Right handed beta helix region DUF5376 PF17346.2 gi|91772307|ref|YP_564999.1| - 0.06 13.7 1.2 0.1 12.9 0.1 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5376) Transcrip_reg PF01709.20 gi|91772307|ref|YP_564999.1| - 0.1 12.0 0.1 0.39 10.1 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator Pectate_lyase_3 PF12708.7 gi|91772307|ref|YP_564999.1| - 4.5 7.1 20.0 3 7.6 4.7 2.6 2 1 1 3 3 3 0 Pectate lyase superfamily protein Cuticle_3 PF11018.8 gi|91772308|ref|YP_565000.1| - 0.098 12.9 0.3 0.14 12.3 0.2 1.3 1 1 0 1 1 1 0 Pupal cuticle protein C1 SnoaL PF07366.12 gi|91772309|ref|YP_565001.1| - 9e-07 28.7 0.0 9.9e-07 28.6 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 gi|91772309|ref|YP_565001.1| - 0.00089 19.9 0.0 0.0011 19.6 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain Acetyltransf_7 PF13508.7 gi|91772310|ref|YP_565002.1| - 2.6e-05 24.6 0.0 3.7e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|91772310|ref|YP_565002.1| - 0.00032 20.7 0.0 0.00038 20.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|91772310|ref|YP_565002.1| - 0.0011 19.2 0.0 0.0017 18.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family DEAD PF00270.29 gi|91772311|ref|YP_565003.1| - 2e-51 174.2 0.1 8.8e-51 172.1 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|91772311|ref|YP_565003.1| - 3.1e-31 108.0 0.2 1.5e-30 105.8 0.3 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain UTP25 PF06862.12 gi|91772311|ref|YP_565003.1| - 3.9e-08 32.5 0.2 0.0002 20.3 0.1 3.4 2 1 1 3 3 3 2 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 ResIII PF04851.15 gi|91772311|ref|YP_565003.1| - 9.3e-08 32.3 0.0 3.3e-07 30.5 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|91772311|ref|YP_565003.1| - 0.00014 22.2 0.1 0.018 15.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain RraA-like PF03737.15 gi|91772311|ref|YP_565003.1| - 0.0013 18.9 0.0 0.061 13.5 0.0 2.8 3 0 0 3 3 3 1 Aldolase/RraA AAA_30 PF13604.6 gi|91772311|ref|YP_565003.1| - 0.0016 18.2 0.0 0.0039 16.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|91772311|ref|YP_565003.1| - 0.015 15.5 0.5 0.13 12.6 0.5 2.4 1 1 0 1 1 1 0 AAA domain ERCC3_RAD25_C PF16203.5 gi|91772311|ref|YP_565003.1| - 0.019 14.2 0.0 0.031 13.5 0.0 1.3 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase DUF2608 PF11019.8 gi|91772311|ref|YP_565003.1| - 0.036 13.5 0.0 0.062 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2608) Flavi_DEAD PF07652.14 gi|91772311|ref|YP_565003.1| - 0.042 13.8 0.0 0.13 12.2 0.0 1.9 1 1 0 1 1 1 0 Flavivirus DEAD domain CMS1 PF14617.6 gi|91772311|ref|YP_565003.1| - 0.12 11.7 0.0 0.12 11.7 0.0 2.2 3 0 0 3 3 2 0 U3-containing 90S pre-ribosomal complex subunit TauE PF01925.19 gi|91772312|ref|YP_565004.1| - 7.2e-48 163.3 35.6 9.3e-48 162.9 35.6 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Peptidase_M50 PF02163.22 gi|91772313|ref|YP_565005.1| - 2.1e-23 82.9 0.0 1.7e-22 79.9 0.0 2.1 1 1 0 1 1 1 1 Peptidase family M50 PDZ_2 PF13180.6 gi|91772313|ref|YP_565005.1| - 6.3e-16 58.5 3.4 4.2e-07 30.2 0.2 2.3 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 gi|91772313|ref|YP_565005.1| - 9.2e-08 31.8 0.1 0.00051 19.8 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 gi|91772313|ref|YP_565005.1| - 1.4e-05 25.3 6.2 0.00048 20.4 0.3 2.8 1 1 1 2 2 2 2 PDZ domain PDZ_1 PF12812.7 gi|91772313|ref|YP_565005.1| - 0.0077 16.2 1.3 3.9 7.6 0.1 2.4 2 0 0 2 2 2 2 PDZ-like domain Peptidase_M50B PF13398.6 gi|91772313|ref|YP_565005.1| - 0.035 13.7 0.2 0.035 13.7 0.2 2.9 4 0 0 4 4 4 0 Peptidase M50B-like GP3 PF03076.14 gi|91772313|ref|YP_565005.1| - 0.065 13.3 0.1 0.17 11.9 0.1 1.6 1 0 0 1 1 1 0 Equine arteritis virus GP3 SnoaL PF07366.12 gi|91772314|ref|YP_565006.1| - 3.5e-26 91.5 0.0 4.1e-26 91.2 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 gi|91772314|ref|YP_565006.1| - 3.4e-12 46.9 0.0 4.5e-12 46.5 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain Fumerase PF05681.14 gi|91772315|ref|YP_565007.1| - 1.8e-95 319.5 0.0 2e-95 319.3 0.0 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) RPAP1_N PF08621.10 gi|91772315|ref|YP_565007.1| - 0.083 12.7 0.1 2.1 8.2 0.0 2.4 2 0 0 2 2 2 0 RPAP1-like, N-terminal Fumerase_C PF05683.12 gi|91772316|ref|YP_565008.1| - 1.5e-46 158.4 0.0 1.6e-46 158.2 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus tRNA_anti-codon PF01336.25 gi|91772316|ref|YP_565008.1| - 0.14 12.2 0.0 0.5 10.4 0.0 1.8 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain T2SSF PF00482.23 gi|91772317|ref|YP_565009.1| - 3.5e-19 69.0 1.8 3.5e-19 69.0 1.8 1.6 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F SRTM1 PF15872.5 gi|91772317|ref|YP_565009.1| - 0.044 13.9 0.1 0.087 13.0 0.1 1.5 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 COX7a PF02238.15 gi|91772317|ref|YP_565009.1| - 0.39 11.1 3.0 1.2 9.6 0.1 2.4 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII T2SSF PF00482.23 gi|91772318|ref|YP_565010.1| - 1.5e-15 57.3 0.1 1.5e-15 57.3 0.1 2.9 4 0 0 4 4 4 1 Type II secretion system (T2SS), protein F HlyE PF06109.13 gi|91772318|ref|YP_565010.1| - 0.0052 16.1 0.0 0.0081 15.5 0.0 1.3 1 0 0 1 1 1 1 Haemolysin E (HlyE) DUF2207 PF09972.9 gi|91772318|ref|YP_565010.1| - 2.4 6.8 12.0 2.9 6.6 0.4 2.3 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) T2SSE PF00437.20 gi|91772319|ref|YP_565011.1| - 6.3e-50 169.8 0.0 1e-49 169.1 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein ATP_bind_1 PF03029.17 gi|91772319|ref|YP_565011.1| - 0.042 13.6 0.8 3 7.6 0.1 2.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_29 PF13555.6 gi|91772319|ref|YP_565011.1| - 0.067 12.9 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF4065 PF13274.6 gi|91772319|ref|YP_565011.1| - 0.3 12.0 2.0 0.3 12.0 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4065) Glycos_trans_3N PF02885.17 gi|91772320|ref|YP_565012.1| - 4.7e-17 61.6 0.6 1.2e-16 60.3 0.6 1.7 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain PYNP_C PF07831.13 gi|91772320|ref|YP_565012.1| - 2.5e-13 49.5 0.0 6.5e-13 48.1 0.0 1.8 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_transf_3 PF00591.21 gi|91772320|ref|YP_565012.1| - 2.5e-12 46.9 0.3 1.8e-11 44.2 0.3 2.1 1 1 0 1 1 1 1 Glycosyl transferase family, a/b domain Molydop_binding PF01568.21 gi|91772320|ref|YP_565012.1| - 1e-05 25.5 0.1 2.6e-05 24.2 0.1 1.6 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain CDC48_N PF02359.18 gi|91772320|ref|YP_565012.1| - 0.00067 19.8 0.1 0.0014 18.7 0.1 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain DUF2254 PF10011.9 gi|91772320|ref|YP_565012.1| - 0.004 16.0 0.0 0.0058 15.5 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) DUF1160 PF06648.11 gi|91772320|ref|YP_565012.1| - 0.037 14.0 0.1 0.079 13.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) RPN6_C_helix PF18503.1 gi|91772320|ref|YP_565012.1| - 0.04 13.7 1.2 0.093 12.5 0.1 2.2 2 0 0 2 2 2 0 26S proteasome subunit RPN6 C-terminal helix domain Trm56 PF01994.16 gi|91772321|ref|YP_565013.1| - 4.2e-48 162.2 0.0 5.2e-48 161.9 0.0 1.1 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SpoU_methylase PF00588.19 gi|91772321|ref|YP_565013.1| - 0.0083 16.3 0.0 0.011 15.9 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family rRNA_methylase PF06962.12 gi|91772321|ref|YP_565013.1| - 0.048 13.6 0.0 0.08 12.9 0.0 1.4 1 0 0 1 1 1 0 Putative rRNA methylase PDDEXK_4 PF14281.6 gi|91772322|ref|YP_565014.1| - 9e-11 42.2 1.1 1.8e-10 41.3 1.1 1.5 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily MTD PF01993.18 gi|91772322|ref|YP_565014.1| - 0.069 12.5 0.1 0.1 11.9 0.1 1.2 1 0 0 1 1 1 0 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase NIF3 PF01784.18 gi|91772323|ref|YP_565015.1| - 4.8e-59 199.9 0.3 6e-59 199.6 0.3 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) QRPTase_C PF01729.19 gi|91772324|ref|YP_565016.1| - 8e-30 103.8 0.0 1.3e-29 103.2 0.0 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|91772324|ref|YP_565016.1| - 3.8e-13 49.3 0.0 6.3e-13 48.6 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Lactamase_B_3 PF13483.6 gi|91772324|ref|YP_565016.1| - 0.018 15.0 0.1 0.21 11.5 0.0 2.5 3 0 0 3 3 3 0 Beta-lactamase superfamily domain B12-binding PF02310.19 gi|91772324|ref|YP_565016.1| - 0.043 13.8 0.0 0.64 10.1 0.0 2.2 2 0 0 2 2 2 0 B12 binding domain Hemerythrin PF01814.23 gi|91772325|ref|YP_565017.1| - 3.4e-18 66.5 5.8 4.6e-18 66.1 1.9 2.1 2 0 0 2 2 2 1 Hemerythrin HHE cation binding domain HTH_16 PF12645.7 gi|91772325|ref|YP_565017.1| - 0.0071 16.4 0.3 0.014 15.4 0.1 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain Reo_sigmaC PF04582.12 gi|91772325|ref|YP_565017.1| - 0.16 12.2 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Reovirus sigma C capsid protein C-terminal domain CMD PF02627.20 gi|91772326|ref|YP_565018.1| - 2.8e-17 62.5 0.0 3.6e-17 62.2 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SapB_1 PF05184.15 gi|91772326|ref|YP_565018.1| - 0.013 15.5 0.3 0.03 14.4 0.3 1.6 1 0 0 1 1 1 0 Saposin-like type B, region 1 UXS1_N PF11803.8 gi|91772326|ref|YP_565018.1| - 0.041 14.2 0.0 0.061 13.7 0.0 1.4 1 0 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal PA26 PF04636.13 gi|91772326|ref|YP_565018.1| - 0.057 12.3 0.0 0.059 12.3 0.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) GAF_2 PF13185.6 gi|91772327|ref|YP_565019.1| - 4.3e-25 88.6 0.0 8.2e-25 87.7 0.0 1.5 1 0 0 1 1 1 1 GAF domain HATPase_c PF02518.26 gi|91772327|ref|YP_565019.1| - 5.9e-22 78.3 0.0 1.2e-21 77.2 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|91772327|ref|YP_565019.1| - 3.3e-07 30.3 0.0 8e-07 29.1 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|91772327|ref|YP_565019.1| - 1e-06 28.9 0.0 1.8e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|91772327|ref|YP_565019.1| - 2.2e-06 27.8 0.1 8.6e-06 26.0 0.0 2.1 2 0 0 2 2 2 1 PAS domain HisKA PF00512.25 gi|91772327|ref|YP_565019.1| - 6.6e-05 22.9 0.7 0.00014 21.8 0.1 1.9 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 gi|91772327|ref|YP_565019.1| - 0.00087 19.3 0.0 0.0029 17.6 0.0 2.0 1 0 0 1 1 1 1 PAS domain HATPase_c_2 PF13581.6 gi|91772327|ref|YP_565019.1| - 0.00089 19.2 0.0 0.0019 18.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_10 PF13596.6 gi|91772327|ref|YP_565019.1| - 0.0024 18.5 0.0 0.017 15.7 0.0 2.4 2 0 0 2 2 2 1 PAS domain PAS_7 PF12860.7 gi|91772327|ref|YP_565019.1| - 0.014 15.5 0.0 0.12 12.6 0.0 2.5 2 1 0 2 2 2 0 PAS fold CARD PF00619.21 gi|91772327|ref|YP_565019.1| - 0.038 14.0 0.2 0.12 12.4 0.2 1.9 2 0 0 2 2 2 0 Caspase recruitment domain GAF PF01590.26 gi|91772327|ref|YP_565019.1| - 0.12 13.1 0.0 0.22 12.2 0.0 1.4 1 0 0 1 1 1 0 GAF domain Thioredoxin_3 PF13192.6 gi|91772329|ref|YP_565021.1| - 1.1e-24 86.3 1.0 1.2e-24 86.2 1.0 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|91772329|ref|YP_565021.1| - 0.0059 16.8 0.2 0.013 15.7 0.2 1.6 1 1 0 1 1 1 1 Glutaredoxin FtsK_alpha PF17854.1 gi|91772329|ref|YP_565021.1| - 0.072 13.2 0.0 0.082 13.1 0.0 1.1 1 0 0 1 1 1 0 FtsK alpha domain DUF953 PF06110.11 gi|91772329|ref|YP_565021.1| - 0.088 12.4 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) DUF1223 PF06764.11 gi|91772329|ref|YP_565021.1| - 0.13 12.3 0.1 9.4 6.2 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1223) Glyco_transf_4 PF13439.6 gi|91772330|ref|YP_565022.1| - 4.1e-27 95.2 0.1 6.6e-27 94.6 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|91772330|ref|YP_565022.1| - 1.3e-26 93.1 0.0 3.2e-26 91.9 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|91772330|ref|YP_565022.1| - 1.8e-24 86.7 0.0 2.9e-24 86.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|91772330|ref|YP_565022.1| - 1.3e-18 68.0 0.0 1.8e-18 67.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|91772330|ref|YP_565022.1| - 1.6e-14 54.2 0.7 2e-12 47.3 0.7 2.3 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_4_2 PF13477.6 gi|91772330|ref|YP_565022.1| - 4e-09 36.6 0.0 8.6e-09 35.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|91772330|ref|YP_565022.1| - 0.0026 18.1 0.0 0.0058 17.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 S-layer PF07752.11 gi|91772331|ref|YP_565023.1| - 4.4e-199 658.4 34.9 2.2e-103 344.8 12.6 3.0 3 0 0 3 3 3 2 S-layer protein CARDB PF07705.11 gi|91772331|ref|YP_565023.1| - 3e-06 27.4 1.1 1.6e-05 25.1 1.1 2.3 1 0 0 1 1 1 1 CARDB DUF4362 PF14275.6 gi|91772331|ref|YP_565023.1| - 0.0028 17.9 2.4 0.36 11.1 0.4 3.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4362) DUF4198 PF10670.9 gi|91772331|ref|YP_565023.1| - 0.011 16.1 2.0 5.5 7.3 0.0 4.0 3 1 1 4 4 4 0 Domain of unknown function (DUF4198) PEGA PF08308.11 gi|91772331|ref|YP_565023.1| - 0.012 15.4 0.1 0.57 10.1 0.0 3.2 2 0 0 2 2 2 0 PEGA domain A2M PF00207.22 gi|91772331|ref|YP_565023.1| - 0.13 12.1 0.1 23 4.9 0.0 2.7 2 0 0 2 2 2 0 Alpha-2-macroglobulin family DUF5462 PF17547.2 gi|91772331|ref|YP_565023.1| - 0.15 11.4 3.8 0.41 10.0 0.1 3.0 4 0 0 4 4 4 0 Family of unknown function (DUF5462) CBM60 PF16841.5 gi|91772331|ref|YP_565023.1| - 0.69 10.4 6.5 33 5.0 0.2 5.0 6 0 0 6 6 6 0 Ca-dependent carbohydrate-binding module xylan-binding TM_helix PF05552.12 gi|91772332|ref|YP_565024.1| - 2.1e-24 85.2 25.4 5.9e-11 42.2 1.3 5.0 5 0 0 5 5 5 3 Conserved TM helix DUF883 PF05957.13 gi|91772333|ref|YP_565025.1| - 6.5e-06 26.7 20.8 1.5 9.5 0.1 5.9 4 1 2 6 6 6 2 Bacterial protein of unknown function (DUF883) Baculo_PEP_C PF04513.12 gi|91772333|ref|YP_565025.1| - 3.5e-05 23.9 17.6 0.026 14.5 0.7 3.8 1 1 2 3 3 3 3 Baculovirus polyhedron envelope protein, PEP, C terminus Apolipoprotein PF01442.18 gi|91772333|ref|YP_565025.1| - 9.9e-05 22.3 11.5 0.0033 17.3 6.0 2.5 1 1 1 2 2 2 2 Apolipoprotein A1/A4/E domain T2SSF PF00482.23 gi|91772333|ref|YP_565025.1| - 0.00071 19.5 0.8 2.3 8.2 0.0 3.5 2 1 1 3 3 3 2 Type II secretion system (T2SS), protein F ApoLp-III PF07464.11 gi|91772333|ref|YP_565025.1| - 0.002 18.2 20.1 0.23 11.5 4.0 3.6 1 1 3 4 4 4 3 Apolipophorin-III precursor (apoLp-III) NYD-SP28 PF14772.6 gi|91772333|ref|YP_565025.1| - 0.0078 16.2 16.9 1.1 9.3 0.2 3.5 2 2 1 3 3 3 3 Sperm tail Occludin_ELL PF07303.13 gi|91772333|ref|YP_565025.1| - 0.0086 16.8 5.8 0.19 12.5 0.3 3.5 2 1 1 3 3 3 1 Occludin homology domain YtxH PF12732.7 gi|91772333|ref|YP_565025.1| - 0.011 16.2 26.8 4.5 7.9 0.7 5.9 4 1 0 4 4 3 0 YtxH-like protein Peptidase_M9_N PF08453.10 gi|91772333|ref|YP_565025.1| - 0.033 13.9 0.7 1.9 8.2 0.1 2.8 2 1 0 2 2 2 0 Peptidase family M9 N-terminal Syntaxin_2 PF14523.6 gi|91772333|ref|YP_565025.1| - 0.079 13.3 22.8 1.2 9.5 1.3 4.8 1 1 3 4 4 4 0 Syntaxin-like protein Cytochrom_B562 PF07361.11 gi|91772333|ref|YP_565025.1| - 0.12 13.1 11.8 1.6 9.4 0.2 4.1 3 1 0 4 4 4 0 Cytochrome b562 DprA_WH PF17782.1 gi|91772333|ref|YP_565025.1| - 0.14 12.3 0.1 25 5.1 0.0 3.6 4 0 0 4 4 4 0 DprA winged helix domain GnsAB_toxin PF08178.11 gi|91772333|ref|YP_565025.1| - 0.24 11.3 6.7 2.2 8.3 0.2 4.0 3 1 1 4 4 4 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system ZYG-11_interact PF05884.12 gi|91772333|ref|YP_565025.1| - 0.71 9.2 8.8 0.32 10.4 0.4 2.8 1 1 2 3 3 3 0 Interactor of ZYG-11 Fzo_mitofusin PF04799.13 gi|91772333|ref|YP_565025.1| - 1.4 8.5 14.5 4.7 6.7 1.3 4.0 1 1 3 4 4 4 0 fzo-like conserved region DUF1451 PF07295.11 gi|91772333|ref|YP_565025.1| - 2.4 8.2 15.8 11 6.0 0.2 4.1 1 1 3 4 4 4 0 Zinc-ribbon containing domain V-SNARE PF05008.15 gi|91772333|ref|YP_565025.1| - 2.7 8.4 18.9 8.1 6.9 1.1 4.8 2 2 4 6 6 6 0 Vesicle transport v-SNARE protein N-terminus Zw10 PF06248.13 gi|91772333|ref|YP_565025.1| - 2.8 6.4 14.6 1.4 7.4 4.7 2.4 1 1 1 2 2 2 0 Centromere/kinetochore Zw10 ASL_C PF08328.11 gi|91772333|ref|YP_565025.1| - 5.3 7.2 9.9 1.4 9.0 2.4 2.9 2 1 0 3 3 3 0 Adenylosuccinate lyase C-terminal YvrJ PF12841.7 gi|91772333|ref|YP_565025.1| - 5.5 6.6 5.8 2.6 7.7 0.2 3.2 3 0 0 3 3 3 0 YvrJ protein family Syntaxin-6_N PF09177.11 gi|91772333|ref|YP_565025.1| - 7.4 7.2 11.8 34 5.1 0.2 4.2 1 1 3 4 4 4 0 Syntaxin 6, N-terminal DDE_Tnp_1 PF01609.21 gi|91772334|ref|YP_565026.1| - 2.6e-12 46.9 4.4 3.3e-12 46.5 4.4 1.2 1 0 0 1 1 1 1 Transposase DDE domain Lentivirus_VIF PF05851.11 gi|91772334|ref|YP_565026.1| - 0.043 12.7 1.5 0.07 12.0 1.5 1.3 1 0 0 1 1 1 0 Lentivirus virion infectivity factor (VIF) MarC PF01914.17 gi|91772335|ref|YP_565027.1| - 2.2e-54 184.0 16.0 2.5e-54 183.8 16.0 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein RseC_MucC PF04246.12 gi|91772335|ref|YP_565027.1| - 0.62 10.0 12.9 0.12 12.4 1.5 2.6 2 2 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF1772 PF08592.11 gi|91772335|ref|YP_565027.1| - 2.8 8.2 8.7 0.3 11.4 2.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1772) Acetyltransf_1 PF00583.25 gi|91772336|ref|YP_565028.1| - 1.2e-08 35.2 0.0 1.9e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|91772336|ref|YP_565028.1| - 2.2e-07 30.8 0.0 4.2e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|91772336|ref|YP_565028.1| - 9.7e-07 28.9 0.1 1.6e-05 25.0 0.1 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|91772336|ref|YP_565028.1| - 0.00047 20.5 0.0 0.0009 19.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|91772336|ref|YP_565028.1| - 0.031 14.2 0.0 0.055 13.4 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein LAM_C PF12544.8 gi|91772337|ref|YP_565029.1| - 1.4e-44 151.4 0.0 2.4e-44 150.6 0.0 1.4 1 0 0 1 1 1 1 Lysine-2,3-aminomutase Radical_SAM PF04055.21 gi|91772337|ref|YP_565029.1| - 2e-12 47.8 0.0 8e-12 45.9 0.0 2.0 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|91772337|ref|YP_565029.1| - 0.00046 20.3 0.4 0.0061 16.7 0.0 2.7 3 0 0 3 3 3 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|91772337|ref|YP_565029.1| - 0.0043 17.3 0.1 0.017 15.4 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain DUF1353 PF07087.11 gi|91772339|ref|YP_565031.1| - 0.07 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1353) DUF2070 PF09843.9 gi|91772339|ref|YP_565031.1| - 0.36 9.0 16.4 0.38 9.0 16.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) NosD PF05048.13 gi|91772341|ref|YP_565033.1| - 3e-30 105.3 54.1 3.2e-20 72.4 27.3 2.2 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|91772341|ref|YP_565033.1| - 5e-21 75.2 52.0 7.2e-15 55.2 31.6 2.4 1 1 1 2 2 2 2 Right handed beta helix region Pectinesterase PF01095.19 gi|91772341|ref|YP_565033.1| - 0.0011 17.8 0.3 0.0023 16.7 0.2 1.7 1 1 0 1 1 1 1 Pectinesterase DUF3169 PF11368.8 gi|91772341|ref|YP_565033.1| - 0.22 11.0 14.0 0.017 14.7 3.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) FdhD-NarQ PF02634.15 gi|91772342|ref|YP_565034.1| - 3.6e-61 206.9 0.0 4.2e-61 206.7 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family Molybdopterin PF00384.22 gi|91772343|ref|YP_565035.1| - 5.7e-17 61.8 0.0 2.1e-16 59.9 0.0 1.7 1 1 0 1 1 1 1 Molybdopterin oxidoreductase CO_dh PF02552.16 gi|91772343|ref|YP_565035.1| - 0.028 14.2 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.22 gi|91772343|ref|YP_565035.1| - 0.089 12.5 0.0 0.28 10.9 0.0 1.8 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain Molydop_binding PF01568.21 gi|91772344|ref|YP_565036.1| - 4.7e-07 29.8 0.0 6.1e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain GXGXG PF01493.19 gi|91772345|ref|YP_565037.1| - 8.1e-06 25.5 25.0 0.00089 18.9 16.1 2.7 1 1 1 2 2 2 2 GXGXG motif Amidohydro_3 PF07969.11 gi|91772346|ref|YP_565038.1| - 1.2e-91 308.6 0.0 1.5e-91 308.3 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|91772346|ref|YP_565038.1| - 6.9e-07 28.9 0.1 0.0034 16.8 0.0 2.7 3 0 0 3 3 3 2 Amidohydrolase family Fer4 PF00037.27 gi|91772347|ref|YP_565039.1| - 3.7e-54 178.5 84.6 3.6e-09 36.1 2.7 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91772347|ref|YP_565039.1| - 3.1e-37 126.9 69.1 1.4e-10 41.6 7.5 5.6 3 1 2 6 6 6 6 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772347|ref|YP_565039.1| - 1.5e-34 118.8 61.4 3.7e-10 40.6 6.3 7.2 7 0 0 7 7 7 7 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|91772347|ref|YP_565039.1| - 9.2e-34 114.1 85.3 2.6e-05 24.1 1.9 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91772347|ref|YP_565039.1| - 2.6e-32 110.8 64.1 4.3e-11 42.8 6.5 5.6 3 1 4 7 7 7 7 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772347|ref|YP_565039.1| - 1.2e-27 95.8 77.9 1.5e-07 31.4 12.6 6.8 4 2 2 6 6 6 6 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772347|ref|YP_565039.1| - 1.4e-27 95.6 78.5 3.7e-07 30.2 10.2 7.4 3 3 5 8 8 8 8 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772347|ref|YP_565039.1| - 2.2e-27 93.4 81.8 6.4e-06 25.9 2.3 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_4 PF12800.7 gi|91772347|ref|YP_565039.1| - 8.2e-21 72.8 79.0 0.00025 21.3 1.6 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91772347|ref|YP_565039.1| - 9.6e-20 70.8 67.4 6.1e-06 26.6 7.4 6.6 4 2 3 7 7 7 7 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91772347|ref|YP_565039.1| - 3.1e-15 56.4 67.4 0.00026 21.5 13.9 6.7 3 2 3 6 6 6 6 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91772347|ref|YP_565039.1| - 3.2e-13 49.6 109.2 0.011 16.6 5.6 8.4 8 0 0 8 8 8 6 4Fe-4S binding domain Fer4_13 PF13370.6 gi|91772347|ref|YP_565039.1| - 6.1e-07 29.9 89.1 0.25 11.9 3.6 8.9 7 2 1 8 8 8 6 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|91772347|ref|YP_565039.1| - 6.4e-06 26.9 74.2 0.086 13.7 1.1 8.1 3 1 7 11 11 11 6 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91772347|ref|YP_565039.1| - 3.6e-05 23.9 72.6 0.28 11.4 4.3 8.1 4 2 4 8 8 8 6 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91772347|ref|YP_565039.1| - 6.3e-05 23.6 71.0 0.061 14.1 3.3 8.9 6 2 1 7 7 7 4 4Fe-4S single cluster domain Integrase_Zn PF02022.19 gi|91772347|ref|YP_565039.1| - 0.018 15.0 0.3 0.086 12.8 0.3 2.3 1 0 0 1 1 1 0 Integrase Zinc binding domain FmdE PF02663.14 gi|91772348|ref|YP_565040.1| - 5.8e-26 91.1 0.0 7.9e-26 90.7 0.0 1.2 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon DZR PF12773.7 gi|91772348|ref|YP_565040.1| - 0.033 14.2 1.7 0.051 13.6 1.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|91772348|ref|YP_565040.1| - 0.074 12.8 0.7 5 7.0 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf_C2H2_13 PF18508.1 gi|91772348|ref|YP_565040.1| - 0.15 11.7 0.0 0.15 11.7 0.0 1.7 2 0 0 2 2 2 0 Zinc finger domain GATA PF00320.27 gi|91772348|ref|YP_565040.1| - 0.8 9.4 3.6 5.6 6.7 0.1 2.3 1 1 1 2 2 2 0 GATA zinc finger TBP PF00352.21 gi|91772349|ref|YP_565041.1| - 0.015 15.2 0.0 0.016 15.1 0.0 1.3 1 1 0 1 1 1 0 Transcription factor TFIID (or TATA-binding protein, TBP) NifU_N PF01592.16 gi|91772350|ref|YP_565042.1| - 1.1e-42 145.2 0.0 1.8e-42 144.5 0.0 1.4 1 0 0 1 1 1 1 NifU-like N terminal domain FeS_assembly_P PF01883.19 gi|91772350|ref|YP_565042.1| - 2.2e-10 40.6 2.8 4.2e-10 39.7 1.1 2.3 2 1 1 3 3 3 1 Iron-sulfur cluster assembly protein Pilus_CpaD PF09476.10 gi|91772350|ref|YP_565042.1| - 0.01 15.6 0.1 0.87 9.3 0.0 2.1 2 0 0 2 2 2 2 Pilus biogenesis CpaD protein (pilus_cpaD) CO_deh_flav_C PF03450.17 gi|91772350|ref|YP_565042.1| - 0.041 14.1 0.0 0.086 13.0 0.0 1.5 1 0 0 1 1 1 0 CO dehydrogenase flavoprotein C-terminal domain Aminotran_5 PF00266.19 gi|91772351|ref|YP_565043.1| - 3.2e-70 236.9 0.0 3.9e-70 236.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|91772351|ref|YP_565043.1| - 9.3e-06 25.2 0.2 1.4e-05 24.6 0.2 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|91772351|ref|YP_565043.1| - 0.004 16.5 0.1 0.0059 15.9 0.1 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Gp_dh_C PF02800.20 gi|91772351|ref|YP_565043.1| - 0.022 14.3 0.0 0.067 12.8 0.0 1.8 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Cys_Met_Meta_PP PF01053.20 gi|91772351|ref|YP_565043.1| - 0.061 11.9 0.3 0.097 11.2 0.3 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Transketolase_C PF02780.20 gi|91772351|ref|YP_565043.1| - 0.14 12.1 0.2 0.47 10.3 0.1 1.9 2 0 0 2 2 2 0 Transketolase, C-terminal domain HTH_3 PF01381.22 gi|91772352|ref|YP_565044.1| - 0.00055 19.9 0.0 0.00089 19.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_24 PF13412.6 gi|91772352|ref|YP_565044.1| - 0.0045 16.5 0.0 0.0078 15.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|91772352|ref|YP_565044.1| - 0.0074 16.1 0.1 0.023 14.5 0.0 1.7 2 0 0 2 2 2 1 Homeodomain-like domain HTH_7 PF02796.15 gi|91772352|ref|YP_565044.1| - 0.0093 16.0 0.0 0.018 15.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_Tnp_ISL3 PF13542.6 gi|91772352|ref|YP_565044.1| - 0.015 14.7 0.0 0.1 12.0 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 DUF2811 PF10929.8 gi|91772352|ref|YP_565044.1| - 0.016 15.5 0.0 0.032 14.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2811) MarR_2 PF12802.7 gi|91772352|ref|YP_565044.1| - 0.018 14.9 0.0 0.035 14.0 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 gi|91772352|ref|YP_565044.1| - 0.029 14.5 0.1 0.065 13.4 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|91772352|ref|YP_565044.1| - 0.036 13.9 0.0 4.4 7.3 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Sigma70_r4_2 PF08281.12 gi|91772352|ref|YP_565044.1| - 0.04 13.6 0.0 0.082 12.6 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 YdaS_antitoxin PF15943.5 gi|91772352|ref|YP_565044.1| - 0.05 13.5 0.0 0.084 12.7 0.0 1.5 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_31 PF13560.6 gi|91772352|ref|YP_565044.1| - 0.059 13.7 0.0 0.13 12.6 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_37 PF13744.6 gi|91772352|ref|YP_565044.1| - 0.079 12.9 0.0 0.2 11.6 0.0 1.6 1 1 0 2 2 2 0 Helix-turn-helix domain P22_Cro PF14549.6 gi|91772352|ref|YP_565044.1| - 0.09 12.6 0.0 0.22 11.4 0.0 1.6 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro Cro PF09048.10 gi|91772352|ref|YP_565044.1| - 0.11 12.6 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Cro HTH_3 PF01381.22 gi|91772353|ref|YP_565045.1| - 3.5e-18 65.4 0.0 3.8e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|91772353|ref|YP_565045.1| - 8.6e-09 35.3 0.1 1e-08 35.1 0.1 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|91772353|ref|YP_565045.1| - 2.7e-08 34.1 0.0 3.3e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 gi|91772353|ref|YP_565045.1| - 1.7e-07 31.5 0.0 1.9e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|91772353|ref|YP_565045.1| - 8e-05 22.4 0.1 9.9e-05 22.1 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|91772353|ref|YP_565045.1| - 0.00021 21.2 0.1 0.00032 20.6 0.1 1.2 1 0 0 1 1 1 1 HTH domain Translin PF01997.16 gi|91772353|ref|YP_565045.1| - 0.0096 15.9 0.1 0.01 15.8 0.1 1.1 1 0 0 1 1 1 1 Translin family YdaS_antitoxin PF15943.5 gi|91772353|ref|YP_565045.1| - 0.022 14.6 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_Crp_2 PF13545.6 gi|91772353|ref|YP_565045.1| - 0.026 14.5 0.0 0.035 14.1 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 gi|91772353|ref|YP_565045.1| - 0.032 13.7 0.1 0.048 13.2 0.1 1.2 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_24 PF13412.6 gi|91772353|ref|YP_565045.1| - 0.036 13.6 0.0 0.049 13.2 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF2178 PF09946.9 gi|91772354|ref|YP_565046.1| - 1.4e-26 92.7 5.6 1.6e-26 92.5 5.6 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) DUF3796 PF12676.7 gi|91772354|ref|YP_565046.1| - 0.11 12.9 2.7 0.16 12.4 2.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3796) SLATT_1 PF18181.1 gi|91772354|ref|YP_565046.1| - 0.21 11.5 1.4 8.6 6.3 0.1 2.1 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 MerC PF03203.14 gi|91772354|ref|YP_565046.1| - 0.87 10.1 5.2 0.25 11.8 0.7 2.0 2 1 0 2 2 2 0 MerC mercury resistance protein META PF03724.16 gi|91772355|ref|YP_565047.1| - 1.3e-19 70.2 0.0 1.9e-19 69.6 0.0 1.2 1 0 0 1 1 1 1 META domain DUF1344 PF07076.11 gi|91772355|ref|YP_565047.1| - 0.00067 19.5 0.1 6.5 6.8 0.0 3.5 3 0 0 3 3 3 2 Protein of unknown function (DUF1344) DUF3221 PF11518.8 gi|91772355|ref|YP_565047.1| - 0.0056 17.0 0.0 0.02 15.3 0.0 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF3221) YjcQ PF09639.10 gi|91772356|ref|YP_565048.1| - 0.088 13.0 1.3 1.4 9.1 0.2 2.4 1 1 1 2 2 2 0 YjcQ protein DUF4756 PF15948.5 gi|91772357|ref|YP_565049.1| - 0.022 14.6 0.3 0.038 13.9 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4756) DUF11 PF01345.18 gi|91772358|ref|YP_565050.1| - 1.2e-12 47.9 0.9 1.6e-07 31.5 0.2 3.6 3 0 0 3 3 3 2 Domain of unknown function DUF11 CARDB PF07705.11 gi|91772358|ref|YP_565050.1| - 1.5e-08 34.8 8.2 0.011 15.9 0.1 3.7 3 0 0 3 3 3 3 CARDB BatD PF13584.6 gi|91772358|ref|YP_565050.1| - 3.7e-08 32.6 7.1 0.0049 15.7 0.4 3.8 2 2 1 4 4 4 3 Oxygen tolerance Cupredoxin_1 PF13473.6 gi|91772358|ref|YP_565050.1| - 0.0015 18.6 4.7 1.4 9.0 0.4 4.3 2 1 0 3 3 3 2 Cupredoxin-like domain TRAP_beta PF05753.14 gi|91772358|ref|YP_565050.1| - 0.0021 17.5 4.4 0.1 12.0 0.1 3.5 1 1 0 3 3 3 1 Translocon-associated protein beta (TRAPB) N_BRCA1_IG PF16158.5 gi|91772358|ref|YP_565050.1| - 0.0072 17.0 0.2 13 6.5 0.0 3.9 4 0 0 4 4 4 1 Ig-like domain from next to BRCA1 gene DUF1573 PF07610.11 gi|91772358|ref|YP_565050.1| - 0.0081 16.2 1.8 1.6 8.8 0.1 3.1 3 0 0 3 3 3 1 Protein of unknown function (DUF1573) Big_2 PF02368.18 gi|91772358|ref|YP_565050.1| - 0.013 15.4 0.4 3.9 7.4 0.2 3.6 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 2) NPCBM_assoc PF10633.9 gi|91772358|ref|YP_565050.1| - 0.013 15.7 0.3 5.2 7.4 0.1 3.3 3 0 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase bMG10 PF17973.1 gi|91772358|ref|YP_565050.1| - 0.064 13.5 0.2 43 4.3 0.0 3.9 4 0 0 4 4 4 0 Bacterial Alpha-2-macroglobulin MG10 domain PGF-CTERM PF18204.1 gi|91772358|ref|YP_565050.1| - 0.069 13.1 0.1 0.13 12.3 0.1 1.5 1 0 0 1 1 1 0 PGF-CTERM motif DUF2393 PF09624.10 gi|91772358|ref|YP_565050.1| - 0.11 12.5 1.1 5.7 6.9 0.2 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2393) A2M_BRD PF07703.14 gi|91772358|ref|YP_565050.1| - 0.81 10.0 4.2 2 8.7 0.2 3.0 3 2 0 3 3 3 0 Alpha-2-macroglobulin bait region domain Cupredoxin_1 PF13473.6 gi|91772359|ref|YP_565051.1| - 0.046 13.8 0.7 1.1 9.4 0.0 2.9 3 1 0 3 3 3 0 Cupredoxin-like domain MMR_HSR1 PF01926.23 gi|91772360|ref|YP_565052.1| - 2.4e-16 59.8 0.1 3.3e-16 59.4 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|91772360|ref|YP_565052.1| - 1.2e-11 44.4 0.3 1.5e-10 40.8 0.3 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|91772360|ref|YP_565052.1| - 0.00028 20.8 2.2 0.073 13.0 0.4 2.9 3 1 0 3 3 3 2 RsgA GTPase GTP_EFTU PF00009.27 gi|91772360|ref|YP_565052.1| - 0.0024 17.4 0.1 0.021 14.4 0.0 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 gi|91772360|ref|YP_565052.1| - 0.0048 17.0 1.7 0.032 14.3 1.2 1.9 1 1 1 2 2 2 2 Dynamin family AAA_18 PF13238.6 gi|91772360|ref|YP_565052.1| - 0.039 14.5 0.1 0.09 13.3 0.0 1.6 1 1 0 1 1 1 0 AAA domain Roc PF08477.13 gi|91772360|ref|YP_565052.1| - 0.07 13.3 0.4 0.28 11.4 0.1 2.0 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Radical_SAM PF04055.21 gi|91772361|ref|YP_565053.1| - 1.3e-19 71.1 0.1 1.6e-19 70.9 0.1 1.1 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|91772361|ref|YP_565053.1| - 3.3e-08 33.7 0.0 5.1e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain GGACT PF06094.12 gi|91772362|ref|YP_565054.1| - 8.1e-21 74.9 0.0 9.1e-21 74.7 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like FAD_binding_3 PF01494.19 gi|91772363|ref|YP_565055.1| - 4.8e-12 45.8 3.8 7.4e-10 38.6 0.6 3.0 2 1 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 gi|91772363|ref|YP_565055.1| - 3.5e-09 36.8 0.0 6e-08 32.8 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|91772363|ref|YP_565055.1| - 3.2e-08 33.6 5.3 2.1e-05 24.3 0.5 2.7 2 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|91772363|ref|YP_565055.1| - 3.5e-08 33.2 1.3 4.9e-08 32.7 0.4 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|91772363|ref|YP_565055.1| - 1.6e-07 30.4 0.6 2.7e-07 29.6 0.6 1.4 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 gi|91772363|ref|YP_565055.1| - 3.6e-07 29.6 0.0 3.6e-07 29.6 0.0 1.6 2 0 0 2 2 1 1 Glucose inhibited division protein A Pyr_redox_2 PF07992.14 gi|91772363|ref|YP_565055.1| - 4.6e-07 29.4 0.2 4.7e-06 26.0 0.1 2.5 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|91772363|ref|YP_565055.1| - 2.3e-06 26.9 1.8 5.2e-06 25.8 1.8 1.5 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 gi|91772363|ref|YP_565055.1| - 5.7e-06 25.7 0.0 1.2e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 Thi4 family Trp_halogenase PF04820.14 gi|91772363|ref|YP_565055.1| - 6.2e-06 25.3 0.9 0.0005 19.0 0.1 2.5 2 1 0 2 2 2 1 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|91772363|ref|YP_565055.1| - 1e-05 24.8 2.0 0.0077 15.3 0.4 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein Pyr_redox_3 PF13738.6 gi|91772363|ref|YP_565055.1| - 0.00039 19.8 0.7 0.0014 17.9 1.1 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|91772363|ref|YP_565055.1| - 0.0018 18.8 0.0 0.061 13.9 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|91772363|ref|YP_565055.1| - 0.024 14.0 0.1 0.024 14.0 0.1 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|91772363|ref|YP_565055.1| - 0.093 12.6 0.2 0.25 11.2 0.2 1.7 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|91772363|ref|YP_565055.1| - 0.14 12.5 0.1 0.5 10.6 0.0 1.9 2 0 0 2 2 2 0 TrkA-N domain TRAM PF01938.20 gi|91772364|ref|YP_565056.1| - 1.4e-18 66.6 1.3 1.6e-18 66.4 1.3 1.0 1 0 0 1 1 1 1 TRAM domain Ago_N_1 PF18351.1 gi|91772365|ref|YP_565057.1| - 0.056 13.9 2.4 0.086 13.3 2.4 1.3 1 0 0 1 1 1 0 Fungal Argonaute N-terminal domain adh_short PF00106.25 gi|91772365|ref|YP_565057.1| - 0.2 11.1 0.0 1.8 8.0 0.0 2.0 1 1 0 1 1 1 0 short chain dehydrogenase DUF4346 PF14251.6 gi|91772366|ref|YP_565058.1| - 2.7e-09 37.1 0.0 5.4e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) Pterin_bind PF00809.22 gi|91772366|ref|YP_565058.1| - 4e-09 36.5 1.0 7.3e-09 35.7 1.0 1.5 1 0 0 1 1 1 1 Pterin binding enzyme CdhD PF03599.16 gi|91772366|ref|YP_565058.1| - 0.0019 17.0 0.1 0.003 16.3 0.1 1.2 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit Tubulin PF00091.25 gi|91772367|ref|YP_565059.1| - 8.2e-38 130.6 0.2 1.4e-37 129.8 0.2 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|91772367|ref|YP_565059.1| - 2.3e-34 117.5 0.4 9.9e-34 115.5 0.1 2.2 2 0 0 2 2 2 1 FtsZ family, C-terminal domain AIM24 PF01987.17 gi|91772368|ref|YP_565060.1| - 4.9e-36 124.4 0.2 5.6e-36 124.2 0.2 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 ApbE PF02424.15 gi|91772369|ref|YP_565061.1| - 0.0075 15.8 0.1 0.0075 15.8 0.1 1.7 2 0 0 2 2 2 1 ApbE family Fer4 PF00037.27 gi|91772370|ref|YP_565062.1| - 3.3e-17 61.5 11.6 5.2e-09 35.5 1.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91772370|ref|YP_565062.1| - 4e-12 46.5 23.2 7.2e-09 36.1 12.7 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772370|ref|YP_565062.1| - 4.5e-12 45.3 12.4 1.1e-06 28.4 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|91772370|ref|YP_565062.1| - 6.6e-12 45.0 11.0 6.6e-07 29.1 0.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91772370|ref|YP_565062.1| - 6.3e-10 39.1 20.3 1.1e-06 28.6 12.5 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772370|ref|YP_565062.1| - 8.4e-10 38.6 8.2 0.00017 21.7 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772370|ref|YP_565062.1| - 1.5e-09 37.8 9.0 0.0002 21.4 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772370|ref|YP_565062.1| - 2.1e-09 38.2 7.8 0.00027 21.8 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|91772370|ref|YP_565062.1| - 1.4e-08 35.0 5.0 0.001 19.5 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91772370|ref|YP_565062.1| - 1.2e-07 32.1 3.6 0.0062 17.0 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|91772370|ref|YP_565062.1| - 9.3e-07 29.6 1.9 0.016 16.0 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91772370|ref|YP_565062.1| - 1.2e-06 29.0 11.8 0.0043 17.6 3.2 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|91772370|ref|YP_565062.1| - 2.3e-06 27.7 12.8 0.0013 19.1 3.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91772370|ref|YP_565062.1| - 5.8e-05 23.3 12.1 0.0012 19.0 2.1 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91772370|ref|YP_565062.1| - 0.00011 22.9 20.0 0.033 15.1 6.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|91772370|ref|YP_565062.1| - 0.0076 17.0 11.3 0.1 13.3 1.6 2.6 3 0 0 3 3 2 2 4Fe-4S single cluster domain Trp_syntA PF00290.20 gi|91772370|ref|YP_565062.1| - 0.036 12.9 0.1 0.043 12.7 0.1 1.1 1 0 0 1 1 1 0 Tryptophan synthase alpha chain ETF_QO PF05187.13 gi|91772370|ref|YP_565062.1| - 0.065 13.4 3.1 0.17 12.1 3.1 1.7 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S zf-C2H2_11 PF16622.5 gi|91772370|ref|YP_565062.1| - 1.7 8.5 9.3 9.4 6.1 0.5 2.3 2 0 0 2 2 2 0 zinc-finger C2H2-type c-SKI_SMAD_bind PF08782.10 gi|91772370|ref|YP_565062.1| - 5.9 7.2 8.2 6.7 7.0 1.1 2.2 1 1 1 2 2 2 0 c-SKI Smad4 binding domain HcyBio PF01837.16 gi|91772371|ref|YP_565063.1| - 1.8e-142 474.3 0.2 1.8e-142 474.3 0.2 1.6 2 0 0 2 2 2 1 Homocysteine biosynthesis enzyme, sulfur-incorporation CBS PF00571.28 gi|91772371|ref|YP_565063.1| - 5.6e-26 90.8 2.0 7.3e-12 45.6 0.0 2.7 2 0 0 2 2 2 2 CBS domain DUF5018 PF16410.5 gi|91772371|ref|YP_565063.1| - 0.017 13.8 1.6 0.13 11.0 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5018) IF3_N PF05198.16 gi|91772371|ref|YP_565063.1| - 0.5 10.7 2.0 2.8 8.3 0.0 2.9 3 0 0 3 3 3 0 Translation initiation factor IF-3, N-terminal domain HATPase_c PF02518.26 gi|91772372|ref|YP_565064.1| - 4.4e-29 101.2 1.4 2e-28 99.2 0.3 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91772372|ref|YP_565064.1| - 3.9e-15 55.6 0.2 2.3e-13 50.0 0.0 3.1 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS_3 PF08447.12 gi|91772372|ref|YP_565064.1| - 3.8e-14 52.7 0.1 8.4e-14 51.6 0.1 1.6 1 0 0 1 1 1 1 PAS fold GAF_3 PF13492.6 gi|91772372|ref|YP_565064.1| - 3.2e-08 34.0 0.0 7.7e-08 32.7 0.0 1.7 1 1 0 1 1 1 1 GAF domain DUF3369 PF11849.8 gi|91772372|ref|YP_565064.1| - 8.1e-06 26.1 0.1 1.9e-05 24.9 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3369) HATPase_c_3 PF13589.6 gi|91772372|ref|YP_565064.1| - 9.8e-05 22.2 0.1 0.0002 21.2 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF PF01590.26 gi|91772372|ref|YP_565064.1| - 0.00096 19.8 0.0 0.0018 18.9 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 gi|91772372|ref|YP_565064.1| - 0.00097 19.4 0.0 0.041 14.2 0.0 2.7 2 1 0 2 2 2 1 GAF domain HATPase_c_5 PF14501.6 gi|91772372|ref|YP_565064.1| - 0.0083 16.0 0.0 0.027 14.3 0.0 1.9 2 0 0 2 2 2 1 GHKL domain PAS PF00989.25 gi|91772372|ref|YP_565064.1| - 0.016 15.2 0.0 0.043 13.8 0.0 1.8 1 0 0 1 1 1 0 PAS fold FKBP26_C PF18046.1 gi|91772373|ref|YP_565065.1| - 5.1e-10 39.3 0.0 1.4e-09 37.9 0.0 1.8 2 0 0 2 2 2 1 FKBP26_C-terminal FKBP_C PF00254.28 gi|91772373|ref|YP_565065.1| - 4.3e-09 36.6 0.4 4.4e-08 33.3 0.2 2.2 2 0 0 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase Cadherin PF00028.17 gi|91772374|ref|YP_565066.1| - 5.3e-08 33.2 0.2 5.3e-08 33.2 0.2 3.4 3 1 1 4 4 4 1 Cadherin domain Big_3_5 PF16640.5 gi|91772374|ref|YP_565066.1| - 6.4e-07 29.5 6.6 6.4e-07 29.5 6.6 5.5 6 0 0 6 6 6 1 Bacterial Ig-like domain (group 3) Gram_pos_anchor PF00746.21 gi|91772374|ref|YP_565066.1| - 0.066 13.2 0.1 0.16 12.0 0.1 1.7 1 0 0 1 1 1 0 LPXTG cell wall anchor motif DUF1189 PF06691.11 gi|91772374|ref|YP_565066.1| - 1.1 8.7 5.9 1.2 8.7 1.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1189) PKD PF00801.20 gi|91772374|ref|YP_565066.1| - 3 7.8 9.0 1.4 8.8 0.1 4.8 6 0 0 6 6 6 0 PKD domain DDE_Tnp_IS66 PF03050.14 gi|91772375|ref|YP_565067.1| - 1.7e-63 214.8 0.8 4e-63 213.5 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91772375|ref|YP_565067.1| - 9.5e-11 41.9 3.8 2.7e-10 40.5 3.8 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.6 gi|91772375|ref|YP_565067.1| - 0.00012 22.3 0.1 0.16 12.2 0.2 2.6 2 0 0 2 2 2 2 DDE domain SlyX PF04102.12 gi|91772375|ref|YP_565067.1| - 0.00014 22.4 0.6 0.00039 21.0 0.6 1.7 1 0 0 1 1 1 1 SlyX BST2 PF16716.5 gi|91772375|ref|YP_565067.1| - 0.029 14.9 1.6 0.13 12.9 1.6 2.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 YkyA PF10368.9 gi|91772375|ref|YP_565067.1| - 0.067 12.9 1.5 0.6 9.8 0.7 2.4 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein DUF16 PF01519.16 gi|91772375|ref|YP_565067.1| - 0.15 12.5 2.7 0.58 10.7 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF16 Lar_restr_allev PF14354.6 gi|91772375|ref|YP_565067.1| - 0.53 10.7 7.7 1.2 9.6 5.8 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91772375|ref|YP_565067.1| - 0.62 10.8 8.8 5 7.9 1.0 3.9 4 0 0 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PLATZ PF04640.14 gi|91772375|ref|YP_565067.1| - 2.4 8.8 6.4 0.79 10.4 1.3 2.8 2 1 0 2 2 1 0 PLATZ transcription factor Zn_Tnp_IS1595 PF12760.7 gi|91772375|ref|YP_565067.1| - 3.8 7.6 8.1 0.83 9.7 0.8 3.0 3 0 0 3 3 3 0 Transposase zinc-ribbon domain Aconitase_2_N PF06434.13 gi|91772376|ref|YP_565068.1| - 1.6e-91 305.5 0.0 4.5e-91 304.0 0.0 1.7 2 0 0 2 2 2 1 Aconitate hydratase 2 N-terminus Aconitase_B_N PF11791.8 gi|91772376|ref|YP_565068.1| - 1.3e-57 194.2 0.0 2e-57 193.6 0.0 1.3 1 0 0 1 1 1 1 Aconitate B N-terminal domain Aconitase PF00330.20 gi|91772376|ref|YP_565068.1| - 2.1e-38 132.5 0.0 1.6e-36 126.3 0.0 2.5 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Ketoacyl-synt_C PF02801.22 gi|91772376|ref|YP_565068.1| - 0.039 14.0 0.0 0.14 12.2 0.0 1.9 2 0 0 2 2 2 0 Beta-ketoacyl synthase, C-terminal domain PAS_7 PF12860.7 gi|91772376|ref|YP_565068.1| - 0.11 12.7 0.0 0.32 11.2 0.0 1.8 1 0 0 1 1 1 0 PAS fold zinc_ribbon_2 PF13240.6 gi|91772377|ref|YP_565069.1| - 6.4e-07 28.9 2.8 9.6e-07 28.3 2.8 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|91772377|ref|YP_565069.1| - 1.4e-06 27.5 2.9 2.5e-06 26.7 2.9 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|91772377|ref|YP_565069.1| - 0.00013 22.0 0.5 0.00017 21.5 0.5 1.2 1 0 0 1 1 1 1 Double zinc ribbon PRC PF05239.16 gi|91772377|ref|YP_565069.1| - 0.00061 19.8 0.1 0.0009 19.3 0.1 1.2 1 0 0 1 1 1 1 PRC-barrel domain zinc_ribbon_15 PF17032.5 gi|91772377|ref|YP_565069.1| - 0.0011 19.6 0.2 0.0015 19.3 0.2 1.3 1 0 0 1 1 1 1 zinc-ribbon family UPF0547 PF10571.9 gi|91772377|ref|YP_565069.1| - 0.021 14.9 1.1 0.032 14.3 1.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 zf-LITAF-like PF10601.9 gi|91772377|ref|YP_565069.1| - 0.036 14.3 0.7 0.38 11.1 0.1 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Prok-RING_1 PF14446.6 gi|91772377|ref|YP_565069.1| - 0.068 13.1 0.5 0.11 12.5 0.5 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF1826 PF08856.11 gi|91772377|ref|YP_565069.1| - 0.081 12.8 0.0 0.097 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1826) Nudix_N_2 PF14803.6 gi|91772377|ref|YP_565069.1| - 0.25 11.3 2.1 2.5 8.1 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|91772378|ref|YP_565070.1| - 5.3e-06 26.0 5.0 1.2e-05 24.8 5.0 1.6 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|91772378|ref|YP_565070.1| - 0.0002 21.3 0.4 0.00041 20.3 0.4 1.5 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|91772378|ref|YP_565070.1| - 0.0032 18.2 4.4 0.0053 17.5 4.4 1.7 1 1 0 1 1 1 1 zinc-ribbon family zf-ribbon_3 PF13248.6 gi|91772378|ref|YP_565070.1| - 0.0041 16.5 3.7 0.0041 16.5 3.7 2.1 2 0 0 2 2 2 1 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|91772378|ref|YP_565070.1| - 0.0079 16.1 2.6 0.72 9.8 0.3 2.7 2 0 0 2 2 2 2 Nudix N-terminal RNA_POL_M_15KD PF02150.16 gi|91772378|ref|YP_565070.1| - 0.74 9.7 6.3 0.64 9.9 0.9 2.5 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit NOB1_Zn_bind PF08772.11 gi|91772378|ref|YP_565070.1| - 4.2 7.6 7.2 97 3.2 0.6 2.8 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like NAPRTase PF04095.16 gi|91772379|ref|YP_565071.1| - 5.9e-59 199.6 0.0 8e-59 199.2 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family NAPRTase_N PF17767.1 gi|91772379|ref|YP_565071.1| - 1.5e-33 115.9 0.1 2.4e-33 115.2 0.1 1.3 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Transposase_mut PF00872.18 gi|91772380|ref|YP_565072.1| - 9.5e-113 376.9 3.9 1.2e-112 376.6 3.9 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|91772380|ref|YP_565072.1| - 3.1e-10 40.4 0.0 8.9e-10 38.9 0.0 1.8 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|91772380|ref|YP_565072.1| - 0.00019 21.0 0.7 0.00039 20.0 0.7 1.5 1 1 0 1 1 1 1 Transposase IS66 family DUF4423 PF14394.6 gi|91772380|ref|YP_565072.1| - 0.033 13.9 0.3 0.12 12.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) DDE_Tnp_IS240 PF13610.6 gi|91772380|ref|YP_565072.1| - 0.041 14.1 5.7 5.7 7.2 4.1 2.9 2 1 0 2 2 2 0 DDE domain Cytochrom_C PF00034.21 gi|91772381|ref|YP_565073.1| - 1.8e-07 32.2 0.0 4.4e-07 31.0 0.0 1.6 2 0 0 2 2 2 1 Cytochrome c Cytochrome_CBB3 PF13442.6 gi|91772381|ref|YP_565073.1| - 3.4e-07 30.5 0.3 9.4e-07 29.1 0.3 1.7 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III LPAM_1 PF08139.12 gi|91772381|ref|YP_565073.1| - 0.0047 17.3 0.6 0.0076 16.7 0.6 1.3 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site DUF169 PF02596.15 gi|91772382|ref|YP_565074.1| - 4.1e-66 222.8 0.0 4.6e-66 222.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 CGGC PF08821.11 gi|91772383|ref|YP_565075.1| - 9e-32 109.4 4.4 9.9e-32 109.3 4.4 1.0 1 0 0 1 1 1 1 CGGC domain HTH_45 PF14947.6 gi|91772384|ref|YP_565076.1| - 2.8e-28 97.7 1.6 3.1e-28 97.6 1.6 1.0 1 0 0 1 1 1 1 Winged helix-turn-helix MNE1 PF13762.6 gi|91772385|ref|YP_565077.1| - 0.09 12.8 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component DUF1419 PF07215.11 gi|91772385|ref|YP_565077.1| - 0.15 12.1 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1419) NosD PF05048.13 gi|91772387|ref|YP_565079.1| - 2.5e-34 118.6 52.1 3.8e-21 75.4 22.6 1.9 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|91772387|ref|YP_565079.1| - 5.2e-12 45.9 22.3 5.2e-12 45.9 22.3 1.5 1 1 0 1 1 1 1 Right handed beta helix region Pectinesterase PF01095.19 gi|91772387|ref|YP_565079.1| - 0.036 12.8 0.4 0.3 9.7 0.1 2.3 3 0 0 3 3 3 0 Pectinesterase FeThRed_B PF02943.15 gi|91772388|ref|YP_565080.1| - 5.3e-26 90.7 1.7 5.3e-26 90.7 1.7 1.6 2 0 0 2 2 2 1 Ferredoxin thioredoxin reductase catalytic beta chain Thioredoxin PF00085.20 gi|91772388|ref|YP_565080.1| - 1.1e-21 76.7 0.1 1.7e-21 76.1 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|91772388|ref|YP_565080.1| - 1.1e-08 35.5 0.1 2.3e-08 34.5 0.1 1.6 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 gi|91772388|ref|YP_565080.1| - 1.1e-05 25.4 0.0 2e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin domain OST3_OST6 PF04756.13 gi|91772388|ref|YP_565080.1| - 1.1e-05 25.0 0.1 1.5e-05 24.5 0.1 1.2 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Phosducin PF02114.16 gi|91772388|ref|YP_565080.1| - 1.2e-05 24.4 0.0 1.6e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Phosducin TraF PF13728.6 gi|91772388|ref|YP_565080.1| - 0.00042 20.2 0.2 0.0011 18.9 0.0 1.6 2 0 0 2 2 2 1 F plasmid transfer operon protein HyaE PF07449.11 gi|91772388|ref|YP_565080.1| - 0.0032 17.4 0.0 0.0059 16.6 0.0 1.5 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_6 PF13848.6 gi|91772388|ref|YP_565080.1| - 0.0033 17.4 0.1 0.0096 15.8 0.1 1.8 1 1 1 2 2 2 1 Thioredoxin-like domain DSBA PF01323.20 gi|91772388|ref|YP_565080.1| - 0.0083 15.9 0.1 0.63 9.8 0.1 2.2 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 gi|91772388|ref|YP_565080.1| - 0.015 15.5 0.1 0.029 14.5 0.1 1.5 1 0 0 1 1 1 0 Thioredoxin T4_deiodinase PF00837.17 gi|91772388|ref|YP_565080.1| - 0.026 13.8 0.1 0.13 11.6 0.0 1.9 2 0 0 2 2 2 0 Iodothyronine deiodinase Glutaredoxin PF00462.24 gi|91772388|ref|YP_565080.1| - 0.027 14.7 0.2 0.12 12.6 0.1 2.1 2 0 0 2 2 2 0 Glutaredoxin Thioredoxin_7 PF13899.6 gi|91772388|ref|YP_565080.1| - 0.087 13.0 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin-like FeS PF04060.13 gi|91772389|ref|YP_565081.1| - 8.8e-15 54.1 2.2 8.8e-15 54.1 2.2 2.4 2 0 0 2 2 2 1 Putative Fe-S cluster Fer4 PF00037.27 gi|91772389|ref|YP_565081.1| - 2.5e-09 36.5 21.3 3.4e-08 33.0 5.3 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91772389|ref|YP_565081.1| - 1e-07 32.0 24.9 4.5e-06 26.7 6.7 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91772389|ref|YP_565081.1| - 2.1e-07 30.7 20.7 7.1e-06 25.9 3.8 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91772389|ref|YP_565081.1| - 2.4e-07 30.8 13.7 1.5e-06 28.2 8.5 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91772389|ref|YP_565081.1| - 2.6e-06 27.8 22.7 0.00036 20.9 7.3 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91772389|ref|YP_565081.1| - 9.7e-06 26.1 24.8 0.00024 21.6 4.3 3.0 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772389|ref|YP_565081.1| - 1.4e-05 24.9 2.5 1.4e-05 24.9 2.5 3.5 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91772389|ref|YP_565081.1| - 5.6e-05 23.2 14.6 0.00017 21.6 1.6 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91772389|ref|YP_565081.1| - 0.00016 22.2 4.2 0.00016 22.2 4.2 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772389|ref|YP_565081.1| - 0.00074 19.8 2.9 0.00074 19.8 2.9 3.8 4 1 0 4 4 3 1 4Fe-4S binding domain Fer4_13 PF13370.6 gi|91772389|ref|YP_565081.1| - 0.0028 18.2 12.6 0.0074 16.8 7.1 3.0 2 1 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|91772389|ref|YP_565081.1| - 0.0032 18.2 0.3 0.0032 18.2 0.3 2.9 3 1 0 3 3 2 1 4Fe-4S single cluster domain Fer4_16 PF13484.6 gi|91772389|ref|YP_565081.1| - 0.0044 17.9 20.5 0.012 16.6 2.7 3.2 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|91772389|ref|YP_565081.1| - 0.0048 17.7 23.6 0.012 16.5 7.3 3.7 3 0 0 3 3 3 2 4Fe-4S binding domain YhfH PF14149.6 gi|91772389|ref|YP_565081.1| - 0.0066 16.4 0.6 0.0066 16.4 0.6 2.2 2 0 0 2 2 2 1 YhfH-like protein Fer4_22 PF17179.4 gi|91772389|ref|YP_565081.1| - 0.058 14.2 2.5 0.058 14.2 2.5 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91772389|ref|YP_565081.1| - 0.092 12.9 0.4 0.092 12.9 0.4 2.6 3 0 0 3 3 3 0 4Fe-4S dicluster domain TPP_enzyme_M PF00205.22 gi|91772390|ref|YP_565082.1| - 4.2e-06 26.6 0.0 0.014 15.1 0.0 2.7 2 1 0 2 2 2 2 Thiamine pyrophosphate enzyme, central domain Molybdopterin PF00384.22 gi|91772390|ref|YP_565082.1| - 0.014 14.3 0.0 0.41 9.5 0.0 2.5 2 1 1 3 3 3 0 Molybdopterin oxidoreductase TF_Zn_Ribbon PF08271.12 gi|91772390|ref|YP_565082.1| - 0.18 11.3 1.7 0.58 9.7 1.7 1.9 1 0 0 1 1 1 0 TFIIB zinc-binding CO_dh PF02552.16 gi|91772390|ref|YP_565082.1| - 0.19 11.5 0.1 1 9.1 0.0 2.0 2 0 0 2 2 2 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Molydop_binding PF01568.21 gi|91772391|ref|YP_565083.1| - 9.6e-05 22.4 0.0 0.00011 22.1 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain DUF2099 PF09872.9 gi|91772392|ref|YP_565084.1| - 2e-114 381.1 3.3 2.3e-114 380.9 3.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) FlaG PF03646.15 gi|91772392|ref|YP_565084.1| - 0.0033 17.6 0.0 0.0095 16.1 0.0 1.7 1 0 0 1 1 1 1 FlaG protein AMP-binding_C_2 PF14535.6 gi|91772393|ref|YP_565085.1| - 2.1e-28 98.5 0.6 4.5e-28 97.4 0.6 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|91772393|ref|YP_565085.1| - 4.3e-17 61.8 0.1 4.7e-16 58.4 0.1 1.9 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.12 gi|91772393|ref|YP_565085.1| - 0.0047 16.0 0.0 0.028 13.5 0.0 2.1 2 1 1 3 3 3 1 Acyl-protein synthetase, LuxE UbiA PF01040.18 gi|91772394|ref|YP_565086.1| - 4.3e-15 55.7 26.9 3.6e-14 52.7 26.0 2.2 1 1 0 1 1 1 1 UbiA prenyltransferase family Peptidase_M1 PF01433.20 gi|91772395|ref|YP_565087.1| - 6.4e-07 29.2 0.6 2e-06 27.5 0.6 1.9 1 1 0 1 1 1 1 Peptidase family M1 domain DUF2510 PF10708.9 gi|91772395|ref|YP_565087.1| - 0.076 12.8 1.6 0.25 11.1 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2510) Zn_ribbon_SprT PF17283.2 gi|91772398|ref|YP_565090.1| - 0.0066 16.3 0.7 0.0097 15.8 0.7 1.2 1 0 0 1 1 1 1 SprT-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|91772398|ref|YP_565090.1| - 0.012 15.7 3.0 0.017 15.2 3.0 1.2 1 0 0 1 1 1 0 Zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|91772398|ref|YP_565090.1| - 0.024 14.3 2.5 0.065 12.9 2.5 1.7 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit ArfGap PF01412.18 gi|91772398|ref|YP_565090.1| - 0.058 13.5 0.1 0.073 13.1 0.1 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf zinc_ribbon_6 PF14599.6 gi|91772398|ref|YP_565090.1| - 0.059 13.4 1.5 0.39 10.8 1.6 1.9 1 1 1 2 2 2 0 Zinc-ribbon Arch_flagellin PF01917.16 gi|91772399|ref|YP_565091.1| - 3.5e-42 144.4 7.4 4.1e-42 144.1 7.4 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.16 gi|91772400|ref|YP_565092.1| - 8.3e-46 156.2 3.8 9.5e-46 156.0 3.8 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin DUF3153 PF11353.8 gi|91772400|ref|YP_565092.1| - 0.027 14.0 0.0 0.041 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3153) Arch_flagellin PF01917.16 gi|91772402|ref|YP_565094.1| - 2.8e-11 43.9 1.7 3.3e-11 43.7 1.7 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin Nuc_recep-AF1 PF11825.8 gi|91772402|ref|YP_565094.1| - 0.083 13.0 2.0 0.14 12.3 2.0 1.5 1 1 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 Arch_flagellin PF01917.16 gi|91772403|ref|YP_565095.1| - 3.8e-06 27.2 0.7 5e-06 26.8 0.7 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin ATPase PF06745.13 gi|91772404|ref|YP_565096.1| - 7.2e-25 87.7 0.0 8.2e-25 87.5 0.0 1.0 1 0 0 1 1 1 1 KaiC PAXNEB PF05625.11 gi|91772404|ref|YP_565096.1| - 3.4e-10 39.6 0.8 6.8e-07 28.7 0.1 2.1 2 0 0 2 2 2 2 PAXNEB protein Rad51 PF08423.11 gi|91772404|ref|YP_565096.1| - 3.4e-07 29.8 0.1 7.2e-07 28.7 0.1 1.5 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.6 gi|91772404|ref|YP_565096.1| - 0.00014 21.5 0.0 0.00026 20.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF835 PF05763.12 gi|91772404|ref|YP_565096.1| - 0.00043 20.0 0.2 0.00082 19.1 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF835) DnaB_C PF03796.15 gi|91772404|ref|YP_565096.1| - 0.0026 17.1 0.1 0.074 12.4 0.0 2.5 1 1 1 2 2 2 1 DnaB-like helicase C terminal domain Mad3_BUB1_I_2 PF17014.5 gi|91772404|ref|YP_565096.1| - 0.0041 17.2 0.3 0.077 13.1 0.0 2.2 2 0 0 2 2 2 1 Putative Mad3/BUB1 like region 1 protein AAA_22 PF13401.6 gi|91772404|ref|YP_565096.1| - 0.0079 16.5 0.1 0.012 15.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|91772404|ref|YP_565096.1| - 0.017 15.6 0.0 0.027 14.9 0.0 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|91772404|ref|YP_565096.1| - 0.021 14.9 0.2 0.39 10.8 0.2 2.3 1 1 0 1 1 1 0 AAA domain RecA PF00154.21 gi|91772404|ref|YP_565096.1| - 0.04 13.4 0.0 0.14 11.6 0.0 1.8 2 0 0 2 2 2 0 recA bacterial DNA recombination protein S4_2 PF13275.6 gi|91772404|ref|YP_565096.1| - 0.054 13.3 0.1 1.3 8.9 0.0 2.6 3 0 0 3 3 3 0 S4 domain Elong_Iki1 PF10483.9 gi|91772404|ref|YP_565096.1| - 0.069 12.6 0.0 0.094 12.2 0.0 1.2 1 0 0 1 1 1 0 Elongator subunit Iki1 T2SSE PF00437.20 gi|91772405|ref|YP_565097.1| - 7.2e-43 146.6 0.0 9.9e-43 146.2 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|91772405|ref|YP_565097.1| - 0.0097 16.4 0.0 0.025 15.1 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 gi|91772405|ref|YP_565097.1| - 0.013 15.2 0.1 0.03 14.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|91772405|ref|YP_565097.1| - 0.067 13.5 0.0 0.16 12.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|91772405|ref|YP_565097.1| - 0.072 13.6 0.2 0.22 12.0 0.2 1.8 1 0 0 1 1 1 0 AAA domain T2SSF PF00482.23 gi|91772406|ref|YP_565098.1| - 6.3e-13 48.8 2.7 8.6e-06 25.7 0.2 3.4 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F Spore_III_AB PF09548.10 gi|91772406|ref|YP_565098.1| - 0.004 17.3 0.3 15 5.6 0.1 3.4 2 1 1 3 3 3 2 Stage III sporulation protein AB (spore_III_AB) NuA4 PF09340.10 gi|91772407|ref|YP_565099.1| - 0.052 13.4 0.2 0.19 11.6 0.1 1.9 1 1 1 2 2 2 0 Histone acetyltransferase subunit NuA4 MCPsignal PF00015.21 gi|91772409|ref|YP_565101.1| - 3.4e-41 140.9 44.5 1.6e-39 135.5 17.0 4.3 3 1 3 6 6 4 4 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_3 PF08447.12 gi|91772409|ref|YP_565101.1| - 2.7e-18 66.0 0.0 1.5e-17 63.6 0.0 2.4 3 0 0 3 3 1 1 PAS fold PAS_4 PF08448.10 gi|91772409|ref|YP_565101.1| - 2.9e-11 43.6 0.0 5.8e-06 26.5 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.7 gi|91772409|ref|YP_565101.1| - 2.7e-10 40.4 2.0 0.00057 20.1 0.0 3.5 3 1 0 3 3 3 2 PAS domain DUF948 PF06103.11 gi|91772409|ref|YP_565101.1| - 2.4e-08 34.1 34.2 2.5e-05 24.5 2.1 7.2 2 1 3 7 7 7 4 Bacterial protein of unknown function (DUF948) PAS PF00989.25 gi|91772409|ref|YP_565101.1| - 1.1e-05 25.4 0.0 0.11 12.5 0.0 2.7 2 0 0 2 2 2 2 PAS fold FH2 PF02181.23 gi|91772409|ref|YP_565101.1| - 0.0028 16.8 3.2 0.0028 16.8 3.2 2.8 1 1 0 2 2 2 1 Formin Homology 2 Domain DASH_Duo1 PF08651.10 gi|91772409|ref|YP_565101.1| - 0.013 15.3 21.8 0.84 9.5 0.1 6.4 6 0 0 6 6 6 0 DASH complex subunit Duo1 Laminin_II PF06009.12 gi|91772409|ref|YP_565101.1| - 0.017 15.1 34.1 0.045 13.8 2.7 5.7 3 2 1 5 5 5 0 Laminin Domain II PAS_10 PF13596.6 gi|91772409|ref|YP_565101.1| - 0.067 13.8 0.6 0.92 10.1 0.0 3.1 3 1 0 3 3 3 0 PAS domain HAMP PF00672.25 gi|91772409|ref|YP_565101.1| - 0.14 12.6 0.9 68 4.0 0.0 4.1 5 0 0 5 5 4 0 HAMP domain Mce4_CUP1 PF11887.8 gi|91772409|ref|YP_565101.1| - 0.22 11.0 14.4 1.8 7.9 3.0 3.3 1 1 1 3 3 3 0 Cholesterol uptake porter CUP1 of Mce4, putative DUF1664 PF07889.12 gi|91772409|ref|YP_565101.1| - 0.22 11.6 25.0 2.2 8.4 1.0 5.3 3 2 1 6 6 5 0 Protein of unknown function (DUF1664) Cob_adeno_trans PF01923.18 gi|91772409|ref|YP_565101.1| - 0.3 11.2 12.0 0.14 12.3 0.7 3.4 2 1 1 3 3 3 0 Cobalamin adenosyltransferase Fib_alpha PF08702.10 gi|91772409|ref|YP_565101.1| - 0.58 10.3 23.0 0.7 10.1 2.6 5.0 3 2 1 5 5 5 0 Fibrinogen alpha/beta chain family AAA_14 PF13173.6 gi|91772409|ref|YP_565101.1| - 0.59 10.2 5.1 5.8 7.0 0.4 3.3 2 1 1 3 3 3 0 AAA domain Sec34 PF04136.15 gi|91772409|ref|YP_565101.1| - 1.2 9.0 16.9 1.1 9.1 1.5 4.9 5 0 0 5 5 5 0 Sec34-like family Rx_N PF18052.1 gi|91772409|ref|YP_565101.1| - 2.5 8.4 7.3 5 7.5 0.6 4.1 4 2 0 4 4 4 0 Rx N-terminal domain NPV_P10 PF05531.12 gi|91772409|ref|YP_565101.1| - 2.6 8.6 24.3 2.3 8.7 1.5 6.1 4 2 2 6 6 6 0 Nucleopolyhedrovirus P10 protein BLOC1_2 PF10046.9 gi|91772409|ref|YP_565101.1| - 3.7 7.9 33.2 0.32 11.3 0.6 5.5 5 2 1 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CheW PF01584.19 gi|91772410|ref|YP_565102.1| - 2.7e-37 127.5 0.5 3.1e-37 127.3 0.5 1.0 1 0 0 1 1 1 1 CheW-like domain CheF-arch PF04283.12 gi|91772411|ref|YP_565103.1| - 5.9e-14 52.3 0.1 9.2e-13 48.4 0.1 2.1 1 1 0 1 1 1 1 Chemotaxis signal transduction system protein F from archaea Response_reg PF00072.24 gi|91772412|ref|YP_565104.1| - 2.7e-31 108.0 0.7 3e-31 107.9 0.7 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CheB_methylest PF01339.17 gi|91772413|ref|YP_565105.1| - 3.1e-55 186.5 0.2 5.5e-55 185.7 0.2 1.4 1 0 0 1 1 1 1 CheB methylesterase Response_reg PF00072.24 gi|91772413|ref|YP_565105.1| - 2.9e-26 91.8 2.1 1.5e-25 89.6 1.0 2.2 2 0 0 2 2 2 1 Response regulator receiver domain P2 PF07194.11 gi|91772414|ref|YP_565106.1| - 8e-23 80.3 15.8 3e-13 49.6 4.6 4.6 5 0 0 5 5 5 2 P2 response regulator binding domain CheW PF01584.19 gi|91772414|ref|YP_565106.1| - 8.3e-23 80.6 1.8 8.3e-23 80.6 1.8 2.3 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.26 gi|91772414|ref|YP_565106.1| - 2.5e-19 69.9 1.3 6.9e-19 68.4 0.2 2.3 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Hpt PF01627.23 gi|91772414|ref|YP_565106.1| - 2.6e-16 59.6 0.0 8.4e-16 58.0 0.0 2.0 1 0 0 1 1 1 1 Hpt domain H-kinase_dim PF02895.14 gi|91772414|ref|YP_565106.1| - 6.8e-15 55.2 6.7 2.8e-12 46.9 1.0 3.9 3 0 0 3 3 3 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.6 gi|91772414|ref|YP_565106.1| - 7.6e-06 25.8 0.3 4e-05 23.5 0.3 2.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|91772414|ref|YP_565106.1| - 0.0048 16.8 4.2 0.013 15.4 0.1 3.2 2 0 0 2 2 2 1 GHKL domain HATPase_c_2 PF13581.6 gi|91772414|ref|YP_565106.1| - 0.027 14.4 0.0 0.068 13.1 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain CheC PF04509.12 gi|91772415|ref|YP_565107.1| - 2.3e-23 81.8 0.2 4.5e-12 45.7 0.0 2.5 2 0 0 2 2 2 2 CheC-like family CheX PF13690.6 gi|91772415|ref|YP_565107.1| - 1e-07 32.0 1.2 0.00057 20.0 0.1 2.5 2 1 0 2 2 2 2 Chemotaxis phosphatase CheX CheD PF03975.13 gi|229220840|ref|YP_565108.2| - 3.4e-27 94.7 0.1 5e-27 94.1 0.1 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheR PF01739.18 gi|91772417|ref|YP_565109.1| - 3.2e-56 189.9 0.1 4e-56 189.6 0.1 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.15 gi|91772417|ref|YP_565109.1| - 1.1e-10 41.0 1.0 2.1e-10 40.2 1.0 1.5 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_25 PF13649.6 gi|91772417|ref|YP_565109.1| - 1.1e-05 26.1 0.0 9e-05 23.1 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91772417|ref|YP_565109.1| - 3.7e-05 24.4 0.0 0.00019 22.1 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91772417|ref|YP_565109.1| - 0.00087 19.1 0.0 0.0016 18.2 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|91772417|ref|YP_565109.1| - 0.0024 17.3 0.1 0.0063 16.0 0.0 1.7 2 0 0 2 2 2 1 Tellurite resistance protein TehB Methyltransf_23 PF13489.6 gi|91772417|ref|YP_565109.1| - 0.016 15.1 0.0 0.02 14.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 gi|91772417|ref|YP_565109.1| - 0.019 15.6 0.0 0.083 13.5 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase domain Y2_Tnp PF04986.13 gi|91772418|ref|YP_565110.1| - 7.1e-44 150.1 5.0 7.1e-44 150.1 5.0 1.5 2 0 0 2 2 2 1 Putative transposase Zn_Tnp_IS91 PF14319.6 gi|91772418|ref|YP_565110.1| - 7.3e-22 77.2 6.8 7.3e-22 77.2 6.8 2.1 2 1 0 2 2 2 1 Transposase zinc-binding domain Proho_convert PF12177.8 gi|91772418|ref|YP_565110.1| - 0.0023 17.9 0.1 1.9 8.6 0.0 2.5 2 0 0 2 2 2 2 Prohormone convertase enzyme Armet PF10208.9 gi|91772418|ref|YP_565110.1| - 0.0066 16.4 1.3 0.018 15.0 0.2 2.2 2 0 0 2 2 2 1 Degradation arginine-rich protein for mis-folding zf-C2H2_11 PF16622.5 gi|91772418|ref|YP_565110.1| - 0.45 10.3 10.0 0.78 9.5 1.9 3.4 3 0 0 3 3 3 0 zinc-finger C2H2-type Zn-ribbon_8 PF09723.10 gi|91772418|ref|YP_565110.1| - 7.8 6.7 8.4 16 5.7 6.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain Fae PF08714.11 gi|91772420|ref|YP_565112.1| - 4.3e-70 234.7 0.5 4.8e-70 234.6 0.5 1.0 1 0 0 1 1 1 1 Formaldehyde-activating enzyme (Fae) ECSIT PF06239.11 gi|91772420|ref|YP_565112.1| - 0.034 13.3 0.0 0.046 12.8 0.0 1.2 1 0 0 1 1 1 0 Evolutionarily conserved signalling intermediate in Toll pathway HxlR PF01638.17 gi|91772421|ref|YP_565113.1| - 1.4e-22 79.3 0.0 1.9e-22 78.9 0.0 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|91772421|ref|YP_565113.1| - 0.019 14.9 0.4 0.037 14.0 0.1 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix PadR PF03551.14 gi|91772421|ref|YP_565113.1| - 0.072 13.1 0.1 0.24 11.4 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|91772421|ref|YP_565113.1| - 0.085 13.0 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain VD10_N PF08476.10 gi|91772421|ref|YP_565113.1| - 0.096 12.4 0.1 0.2 11.4 0.1 1.5 1 0 0 1 1 1 0 Viral D10 N-terminal FAD_binding_3 PF01494.19 gi|91772422|ref|YP_565114.1| - 1.2e-15 57.7 2.2 6.1e-14 52.0 2.2 2.7 1 1 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|91772422|ref|YP_565114.1| - 2.8e-11 43.4 2.7 9.9e-11 41.6 2.7 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|91772422|ref|YP_565114.1| - 1.8e-10 40.5 2.2 5.4e-07 29.0 0.6 2.2 2 0 0 2 2 2 2 FAD binding domain GIDA PF01134.22 gi|91772422|ref|YP_565114.1| - 9.1e-09 34.9 0.4 1.3e-08 34.3 0.4 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|91772422|ref|YP_565114.1| - 4.3e-08 32.3 0.9 1.3e-07 30.6 0.1 2.1 3 0 0 3 3 3 1 HI0933-like protein Lycopene_cycl PF05834.12 gi|91772422|ref|YP_565114.1| - 5.3e-07 29.0 0.4 0.00056 19.1 0.4 2.4 2 1 0 2 2 2 2 Lycopene cyclase protein Pyr_redox_2 PF07992.14 gi|91772422|ref|YP_565114.1| - 7.3e-07 28.7 3.4 2.7e-05 23.5 0.3 2.2 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|91772422|ref|YP_565114.1| - 7.7e-07 29.3 0.3 3e-06 27.4 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|91772422|ref|YP_565114.1| - 3.1e-06 27.0 0.8 0.0023 17.6 0.2 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|91772422|ref|YP_565114.1| - 1.3e-05 24.3 0.7 0.11 11.4 0.5 2.3 1 1 1 2 2 2 2 Tryptophan halogenase Thi4 PF01946.17 gi|91772422|ref|YP_565114.1| - 5.7e-05 22.5 3.2 0.001 18.4 3.2 2.3 1 1 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 gi|91772422|ref|YP_565114.1| - 0.0012 18.1 0.2 0.0019 17.5 0.2 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|91772422|ref|YP_565114.1| - 0.014 14.7 0.0 0.023 14.0 0.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|91772422|ref|YP_565114.1| - 0.055 13.4 0.1 0.12 12.2 0.1 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|91772422|ref|YP_565114.1| - 0.058 14.0 0.4 0.51 10.9 0.1 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase SE PF08491.10 gi|91772422|ref|YP_565114.1| - 0.2 10.7 0.0 0.32 10.0 0.0 1.3 1 0 0 1 1 1 0 Squalene epoxidase NMD3 PF04981.13 gi|91772423|ref|YP_565115.1| - 1.8e-51 174.9 3.3 2.2e-51 174.7 3.3 1.1 1 0 0 1 1 1 1 NMD3 family DUF2797 PF10977.8 gi|91772423|ref|YP_565115.1| - 0.22 11.4 1.5 0.39 10.6 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2797) DZR PF12773.7 gi|91772423|ref|YP_565115.1| - 0.26 11.3 10.0 0.12 12.4 3.3 3.2 3 1 0 3 3 3 0 Double zinc ribbon zf_UBZ PF18439.1 gi|91772423|ref|YP_565115.1| - 5.8 6.6 5.8 42 3.8 0.1 3.5 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger ATP-grasp_3 PF02655.14 gi|91772424|ref|YP_565116.1| - 2.9e-36 125.0 0.0 3.7e-36 124.6 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|91772424|ref|YP_565116.1| - 1.7e-13 50.5 0.0 6.5e-07 29.1 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.6 gi|91772424|ref|YP_565116.1| - 5.8e-09 35.8 0.0 2.8e-08 33.6 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATPgrasp_ST PF14397.6 gi|91772424|ref|YP_565116.1| - 1.7e-06 27.5 0.0 3.1e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp ATP-grasp PF02222.22 gi|91772424|ref|YP_565116.1| - 0.00011 21.8 0.0 0.00053 19.6 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|91772424|ref|YP_565116.1| - 0.00031 20.3 0.0 0.0061 16.1 0.0 2.2 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 gi|91772424|ref|YP_565116.1| - 0.0059 16.4 0.0 3.5 7.4 0.0 2.4 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RimK PF08443.11 gi|91772424|ref|YP_565116.1| - 0.016 14.8 0.0 0.11 12.1 0.0 1.9 2 0 0 2 2 2 0 RimK-like ATP-grasp domain TFIIE_alpha PF02002.17 gi|91772425|ref|YP_565117.1| - 1.7e-13 50.3 1.8 2.1e-13 50.1 0.4 1.7 2 0 0 2 2 2 1 TFIIE alpha subunit HD PF01966.22 gi|91772426|ref|YP_565118.1| - 2.2e-14 53.7 0.7 3.3e-14 53.2 0.7 1.3 1 0 0 1 1 1 1 HD domain Proteasome PF00227.26 gi|91772427|ref|YP_565119.1| - 3.5e-55 186.4 1.7 4.4e-55 186.1 1.7 1.0 1 0 0 1 1 1 1 Proteasome subunit KH_7 PF17214.3 gi|91772428|ref|YP_565120.1| - 6.7e-32 109.3 1.5 9.1e-30 102.4 0.6 3.0 2 0 0 2 2 2 1 KH domain Beta-Casp PF10996.8 gi|91772428|ref|YP_565120.1| - 1.3e-25 89.8 0.0 5.2e-25 87.9 0.0 2.1 2 0 0 2 2 2 1 Beta-Casp domain RMMBL PF07521.12 gi|91772428|ref|YP_565120.1| - 2.8e-14 52.8 0.0 9.7e-14 51.1 0.0 2.0 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|91772428|ref|YP_565120.1| - 5.3e-13 48.8 0.0 9.5e-13 48.0 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|91772428|ref|YP_565120.1| - 5.7e-13 49.3 0.3 4e-11 43.3 0.4 3.1 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|91772428|ref|YP_565120.1| - 1.9e-09 37.4 0.1 4.5e-09 36.1 0.1 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|91772428|ref|YP_565120.1| - 1.4e-05 24.8 1.9 9.4e-05 22.2 0.0 3.1 3 1 0 3 3 3 1 KH domain Lactamase_B_3 PF13483.6 gi|91772428|ref|YP_565120.1| - 0.00012 22.1 0.0 0.00025 21.0 0.0 1.7 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_1 PF00013.29 gi|91772428|ref|YP_565120.1| - 0.0047 16.7 1.4 0.057 13.3 0.3 2.8 2 1 0 2 2 2 1 KH domain KH_4 PF13083.6 gi|91772428|ref|YP_565120.1| - 0.0049 16.7 0.0 0.024 14.5 0.0 2.2 2 0 0 2 2 2 1 KH domain Peptidase_M55 PF04951.13 gi|91772428|ref|YP_565120.1| - 0.037 13.4 0.0 0.093 12.1 0.0 1.6 1 0 0 1 1 1 0 D-aminopeptidase HAD_2 PF13419.6 gi|91772429|ref|YP_565121.1| - 2.9e-25 89.4 0.0 3.9e-25 89.0 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|91772429|ref|YP_565121.1| - 3.1e-13 50.5 0.0 1.7e-12 48.1 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|91772429|ref|YP_565121.1| - 0.00016 21.7 0.0 0.00032 20.7 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like NIF PF03031.18 gi|91772429|ref|YP_565121.1| - 0.00073 19.3 0.0 0.0036 17.1 0.0 1.9 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase HAD PF12710.7 gi|91772429|ref|YP_565121.1| - 0.0021 18.5 0.0 0.0031 18.0 0.0 1.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase ThiS PF02597.20 gi|91772430|ref|YP_565122.1| - 0.021 15.4 0.2 0.027 15.1 0.2 1.2 1 0 0 1 1 1 0 ThiS family TGS PF02824.21 gi|91772430|ref|YP_565122.1| - 0.034 14.2 0.1 0.072 13.2 0.1 1.7 1 1 0 1 1 1 0 TGS domain HTH_34 PF13601.6 gi|91772431|ref|YP_565123.1| - 0.0084 16.3 0.0 0.013 15.7 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain PadR PF03551.14 gi|91772431|ref|YP_565123.1| - 0.058 13.4 0.0 0.13 12.2 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family TrmB PF01978.19 gi|91772431|ref|YP_565123.1| - 0.065 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Semialdhyde_dhC PF02774.18 gi|91772432|ref|YP_565124.1| - 2.8e-47 161.2 0.0 3.8e-47 160.7 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|91772432|ref|YP_565124.1| - 6.1e-33 113.8 0.0 1.2e-32 112.9 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|91772432|ref|YP_565124.1| - 0.036 14.2 0.0 0.07 13.3 0.0 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus NmrA PF05368.13 gi|91772432|ref|YP_565124.1| - 0.058 12.9 0.0 0.092 12.3 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family HATPase_c PF02518.26 gi|91772433|ref|YP_565125.1| - 3.2e-28 98.5 0.1 5e-28 97.8 0.1 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91772433|ref|YP_565125.1| - 1.4e-15 57.0 0.0 2e-15 56.5 0.0 1.2 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 gi|91772433|ref|YP_565125.1| - 0.0003 20.7 0.1 0.00062 19.6 0.0 1.6 1 1 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.6 gi|91772433|ref|YP_565125.1| - 0.0049 16.7 0.0 0.0084 15.9 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATP-synt_J PF04911.12 gi|91772433|ref|YP_565125.1| - 0.056 13.0 0.0 0.12 12.0 0.0 1.5 1 0 0 1 1 1 0 ATP synthase j chain MoaE PF02391.17 gi|91772434|ref|YP_565126.1| - 2e-23 82.8 0.1 3.4e-23 82.1 0.1 1.4 1 0 0 1 1 1 1 MoaE protein MobB PF03205.14 gi|91772434|ref|YP_565126.1| - 9.2e-17 61.2 0.1 2e-16 60.1 0.1 1.6 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_14 PF13173.6 gi|91772434|ref|YP_565126.1| - 0.0025 17.8 0.0 0.0072 16.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|91772434|ref|YP_565126.1| - 0.02 15.0 0.1 0.074 13.1 0.1 1.9 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|91772434|ref|YP_565126.1| - 0.036 13.8 0.0 0.067 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF463 PF04317.12 gi|91772434|ref|YP_565126.1| - 0.071 12.0 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 YcjX-like family, DUF463 RadC PF04002.15 gi|91772435|ref|YP_565127.1| - 1.8e-44 150.6 0.1 2.7e-44 150.0 0.1 1.3 1 0 0 1 1 1 1 RadC-like JAB domain HHH PF00633.23 gi|91772435|ref|YP_565127.1| - 0.00021 21.0 0.0 0.00057 19.6 0.0 1.8 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|91772435|ref|YP_565127.1| - 0.001 19.1 0.0 0.002 18.2 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif Prok-JAB PF14464.6 gi|91772435|ref|YP_565127.1| - 0.0024 17.6 0.0 0.0037 17.0 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain HHH_5 PF14520.6 gi|91772435|ref|YP_565127.1| - 0.0038 17.8 0.0 0.0088 16.6 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_3 PF12836.7 gi|91772435|ref|YP_565127.1| - 0.032 14.5 0.1 0.079 13.2 0.1 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix motif HRDC PF00570.23 gi|91772435|ref|YP_565127.1| - 0.14 12.2 0.0 0.3 11.1 0.0 1.6 1 0 0 1 1 1 0 HRDC domain Hint_2 PF13403.6 gi|91772437|ref|YP_565129.1| - 9.7e-07 29.2 0.2 7.3e-06 26.3 0.1 2.4 3 0 0 3 3 3 1 Hint domain Intein_splicing PF14890.6 gi|91772437|ref|YP_565129.1| - 1.2e-05 25.2 0.0 3.1e-05 23.9 0.0 1.7 1 1 0 1 1 1 1 Intein splicing domain PT-HINT PF07591.11 gi|91772437|ref|YP_565129.1| - 2.6e-05 24.5 0.1 0.035 14.3 0.0 2.4 2 0 0 2 2 2 2 Pretoxin HINT domain Terminase_6C PF17289.2 gi|91772437|ref|YP_565129.1| - 0.0012 19.0 0.0 0.0024 17.9 0.0 1.5 1 0 0 1 1 1 1 Terminase RNaseH-like domain Vint PF14623.6 gi|91772437|ref|YP_565129.1| - 0.0025 17.7 0.0 0.0048 16.7 0.0 1.4 1 0 0 1 1 1 1 Hint-domain FlgN PF05130.12 gi|91772439|ref|YP_565131.1| - 0.00071 20.1 0.7 0.00099 19.6 0.7 1.1 1 0 0 1 1 1 1 FlgN protein HTH_20 PF12840.7 gi|91772439|ref|YP_565131.1| - 0.0042 17.1 0.0 0.0062 16.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|91772439|ref|YP_565131.1| - 0.0095 15.9 0.9 0.014 15.4 0.1 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix Endonuc-MspI PF09208.10 gi|91772439|ref|YP_565131.1| - 0.012 15.0 0.7 0.013 14.9 0.7 1.1 1 0 0 1 1 1 0 Restriction endonuclease MspI MRP-L28 PF09812.9 gi|91772439|ref|YP_565131.1| - 0.033 14.3 1.4 0.039 14.1 1.4 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L28 SdrG_C_C PF10425.9 gi|91772439|ref|YP_565131.1| - 0.064 13.3 0.9 0.079 13.0 0.9 1.1 1 0 0 1 1 1 0 C-terminus of bacterial fibrinogen-binding adhesin HTH_5 PF01022.20 gi|91772439|ref|YP_565131.1| - 0.16 11.9 0.0 0.29 11.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family ABC2_membrane PF01061.24 gi|91772440|ref|YP_565132.1| - 2.3e-37 128.4 23.3 2.3e-37 128.4 23.3 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|91772440|ref|YP_565132.1| - 1.3e-14 54.1 29.3 1.3e-14 54.1 29.3 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|91772440|ref|YP_565132.1| - 1.3e-05 24.7 16.4 1.3e-05 24.7 16.4 1.6 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|91772441|ref|YP_565133.1| - 5.4e-35 120.9 0.0 9.9e-35 120.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91772441|ref|YP_565133.1| - 6.4e-12 45.9 1.1 6.6e-08 32.7 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|91772441|ref|YP_565133.1| - 1.8e-09 38.2 0.3 4.4e-09 36.9 0.3 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_15 PF13175.6 gi|91772441|ref|YP_565133.1| - 2.7e-07 30.6 1.1 0.0089 15.8 0.0 2.5 2 1 0 3 3 3 2 AAA ATPase domain AAA_23 PF13476.6 gi|91772441|ref|YP_565133.1| - 3.8e-06 27.5 0.7 9.4e-06 26.3 0.3 1.7 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 gi|91772441|ref|YP_565133.1| - 1e-05 26.0 0.4 0.00013 22.4 0.2 2.6 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|91772441|ref|YP_565133.1| - 0.001 19.0 0.0 0.0021 18.0 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 gi|91772441|ref|YP_565133.1| - 0.001 18.5 0.1 0.0082 15.6 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91772441|ref|YP_565133.1| - 0.0034 17.1 0.6 0.0064 16.2 0.6 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SRP54 PF00448.22 gi|91772441|ref|YP_565133.1| - 0.0038 16.9 0.1 0.012 15.2 0.1 1.8 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_27 PF13514.6 gi|91772441|ref|YP_565133.1| - 0.0054 16.3 0.1 0.0092 15.6 0.1 1.3 1 0 0 1 1 1 1 AAA domain Nbl1_Borealin_N PF10444.9 gi|91772441|ref|YP_565133.1| - 0.023 14.3 0.1 0.073 12.7 0.1 1.9 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal DUF2813 PF11398.8 gi|91772441|ref|YP_565133.1| - 0.027 13.8 0.2 0.096 11.9 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2813) AAA_7 PF12775.7 gi|91772441|ref|YP_565133.1| - 0.028 13.9 0.1 0.052 13.0 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 gi|91772441|ref|YP_565133.1| - 0.037 13.7 0.2 0.71 9.6 0.0 2.3 2 0 0 2 2 2 0 AAA domain MukB PF04310.12 gi|91772441|ref|YP_565133.1| - 0.042 13.6 0.1 0.083 12.7 0.1 1.4 1 0 0 1 1 1 0 MukB N-terminal AAA_30 PF13604.6 gi|91772441|ref|YP_565133.1| - 0.048 13.4 0.0 0.088 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain T3RM_EcoP15I_C PF18273.1 gi|91772441|ref|YP_565133.1| - 0.053 13.8 2.4 0.095 13.0 0.1 2.4 3 0 0 3 3 3 0 Type III R-M EcoP15I C-terminal domain AAA_31 PF13614.6 gi|91772441|ref|YP_565133.1| - 0.069 13.1 1.1 0.21 11.5 0.0 2.2 2 1 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|91772441|ref|YP_565133.1| - 0.072 13.0 0.1 0.94 9.4 0.0 2.3 2 1 0 2 2 2 0 NTPase GTP_EFTU PF00009.27 gi|91772441|ref|YP_565133.1| - 0.083 12.4 0.0 4.5 6.8 0.0 2.4 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_5 PF07728.14 gi|91772441|ref|YP_565133.1| - 0.1 12.6 0.1 0.53 10.3 0.0 2.3 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|91772441|ref|YP_565133.1| - 0.12 12.6 0.3 0.98 9.7 0.3 2.1 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|91772441|ref|YP_565133.1| - 0.13 12.0 0.1 23 4.7 0.1 2.5 2 1 0 2 2 2 0 IstB-like ATP binding protein GatB_N PF02934.15 gi|91772442|ref|YP_565134.1| - 9.2e-68 228.6 0.1 1.3e-67 228.1 0.1 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|91772442|ref|YP_565134.1| - 3.4e-20 72.4 2.2 4.6e-20 72.0 0.2 2.1 2 0 0 2 2 2 1 GatB domain GAD PF02938.14 gi|91772442|ref|YP_565134.1| - 3.3e-17 62.5 0.0 9.4e-17 61.0 0.0 1.8 1 0 0 1 1 1 1 GAD domain YqeY PF09424.10 gi|91772442|ref|YP_565134.1| - 0.0015 18.6 0.2 0.0047 17.0 0.0 1.9 2 0 0 2 2 2 1 Yqey-like protein HIGH_NTase1 PF05636.11 gi|91772442|ref|YP_565134.1| - 0.044 13.0 0.0 0.079 12.2 0.0 1.4 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase PD40 PF07676.12 gi|91772443|ref|YP_565135.1| - 1.1e-40 136.8 9.4 4.3e-13 48.8 0.2 6.3 5 1 1 6 6 6 6 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 gi|91772443|ref|YP_565135.1| - 2.9e-11 42.7 5.7 0.011 14.5 0.0 5.0 1 1 3 4 4 4 4 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF5050 PF16472.5 gi|91772443|ref|YP_565135.1| - 4.6e-10 39.2 0.3 1.2e-09 37.9 0.2 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF5050) Gmad1 PF10647.9 gi|91772443|ref|YP_565135.1| - 6.5e-06 26.1 0.1 0.0063 16.3 0.0 2.9 2 1 1 3 3 3 2 Lipoprotein LpqB beta-propeller domain Pectate_lyase22 PF14583.6 gi|91772443|ref|YP_565135.1| - 7e-05 21.7 0.2 0.23 10.1 0.1 2.6 1 1 0 2 2 2 2 Oligogalacturonate lyase Peptidase_S9_N PF02897.15 gi|91772443|ref|YP_565135.1| - 7.6e-05 21.7 4.1 0.0023 16.8 0.0 3.0 3 0 0 3 3 3 2 Prolyl oligopeptidase, N-terminal beta-propeller domain Inhibitor_I42 PF09394.10 gi|91772443|ref|YP_565135.1| - 0.0089 16.4 0.4 0.18 12.2 0.1 2.5 2 0 0 2 2 2 1 Chagasin family peptidase inhibitor I42 Sulfate_transp PF00916.20 gi|91772444|ref|YP_565136.1| - 1.3e-54 185.4 41.9 1.3e-54 185.4 41.9 2.6 1 1 1 2 2 2 2 Sulfate permease family STAS PF01740.21 gi|91772444|ref|YP_565136.1| - 1.4e-07 31.1 0.0 2.7e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 STAS domain MFS_MOT1 PF16983.5 gi|91772444|ref|YP_565136.1| - 0.00036 20.9 8.6 0.00036 20.9 8.6 4.3 3 1 1 4 4 4 2 Molybdate transporter of MFS superfamily STAS_2 PF13466.6 gi|91772444|ref|YP_565136.1| - 0.0055 17.0 0.0 0.01 16.1 0.0 1.4 1 0 0 1 1 1 1 STAS domain RAMP4 PF06624.12 gi|91772444|ref|YP_565136.1| - 0.018 15.1 0.2 0.072 13.2 0.2 2.1 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 DUF2196 PF09962.9 gi|91772445|ref|YP_565137.1| - 7.7e-30 102.7 6.0 8.4e-30 102.6 6.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) MMR_HSR1 PF01926.23 gi|91772446|ref|YP_565138.1| - 1.4e-15 57.3 1.1 2e-12 47.2 0.1 2.7 2 1 1 3 3 3 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|91772446|ref|YP_565138.1| - 9.8e-10 38.6 0.1 1.5e-09 38.0 0.1 1.2 1 0 0 1 1 1 1 RsgA GTPase FeoB_N PF02421.18 gi|91772446|ref|YP_565138.1| - 6.1e-09 35.6 1.8 0.0016 18.0 0.1 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|91772446|ref|YP_565138.1| - 7.3e-06 25.7 0.8 0.004 16.7 0.1 2.4 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 gi|91772446|ref|YP_565138.1| - 0.00011 22.3 2.9 0.8 9.7 0.0 3.3 2 1 0 2 2 2 2 Dynamin family AIG1 PF04548.16 gi|91772446|ref|YP_565138.1| - 0.0018 17.6 0.1 0.0028 17.0 0.1 1.4 1 0 0 1 1 1 1 AIG1 family MMR_HSR1_Xtn PF16897.5 gi|91772446|ref|YP_565138.1| - 0.0024 17.9 0.1 0.0039 17.2 0.1 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain cobW PF02492.19 gi|91772446|ref|YP_565138.1| - 0.19 11.3 2.3 0.18 11.4 0.2 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Glyco_tranf_2_3 PF13641.6 gi|91772447|ref|YP_565139.1| - 1.6e-05 24.9 0.0 3.2e-05 23.9 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 DUF772 PF05598.11 gi|91772448|ref|YP_565140.1| - 9.1e-22 76.9 0.0 1.8e-21 75.9 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91772448|ref|YP_565140.1| - 1.8e-16 60.4 2.1 5.5e-16 58.9 2.1 1.8 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91772448|ref|YP_565140.1| - 0.0038 17.4 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91772448|ref|YP_565140.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91772448|ref|YP_565140.1| - 0.037 13.7 0.0 0.067 12.9 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease CheB_methylest PF01339.17 gi|91772449|ref|YP_565141.1| - 1.4e-56 190.8 0.1 3.2e-56 189.7 0.1 1.6 1 0 0 1 1 1 1 CheB methylesterase CheR PF01739.18 gi|91772449|ref|YP_565141.1| - 6.5e-52 175.8 0.0 1.7e-51 174.5 0.0 1.8 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain PAS_10 PF13596.6 gi|91772449|ref|YP_565141.1| - 3.6e-19 69.3 2.9 2.3e-18 66.7 0.7 2.8 3 0 0 3 3 3 1 PAS domain CheR_N PF03705.15 gi|91772449|ref|YP_565141.1| - 9.6e-11 41.2 0.7 1.9e-10 40.3 0.7 1.5 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain InvH PF04741.12 gi|91772449|ref|YP_565141.1| - 0.0089 16.0 0.2 1.6 8.7 0.0 2.5 2 0 0 2 2 2 1 InvH outer membrane lipoprotein APG6_N PF17675.1 gi|91772449|ref|YP_565141.1| - 0.011 16.3 9.5 0.021 15.3 9.5 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region CENP-F_leu_zip PF10473.9 gi|91772449|ref|YP_565141.1| - 0.013 15.5 11.2 0.013 15.5 11.2 1.8 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Prefoldin_3 PF13758.6 gi|91772449|ref|YP_565141.1| - 0.031 14.3 2.3 0.093 12.8 2.3 1.9 1 0 0 1 1 1 0 Prefoldin subunit DUF4264 PF14084.6 gi|91772449|ref|YP_565141.1| - 0.06 13.0 0.6 0.36 10.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4264) DUF3552 PF12072.8 gi|91772449|ref|YP_565141.1| - 0.26 10.7 8.6 0.51 9.7 8.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) ZapB PF06005.12 gi|91772449|ref|YP_565141.1| - 0.58 10.6 11.7 2.8 8.4 11.7 2.2 1 1 0 1 1 1 0 Cell division protein ZapB EF-hand_2 PF09068.11 gi|91772449|ref|YP_565141.1| - 0.8 9.9 3.4 1.2 9.3 0.1 2.6 2 0 0 2 2 2 0 EF hand bZIP_1 PF00170.21 gi|91772449|ref|YP_565141.1| - 5.7 7.1 7.1 9.8 6.4 5.6 2.3 1 1 0 1 1 1 0 bZIP transcription factor HATPase_c PF02518.26 gi|91772450|ref|YP_565142.1| - 2.4e-28 98.9 0.4 7e-28 97.4 0.1 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91772450|ref|YP_565142.1| - 2.8e-18 65.7 0.0 6e-18 64.6 0.0 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 gi|91772450|ref|YP_565142.1| - 0.0013 18.6 0.8 0.0057 16.5 0.4 2.3 1 1 1 2 2 2 1 GHKL domain HATPase_c_3 PF13589.6 gi|91772450|ref|YP_565142.1| - 0.011 15.6 0.0 0.028 14.3 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|91772450|ref|YP_565142.1| - 0.025 14.6 0.1 0.076 13.1 0.0 1.9 1 1 1 2 2 2 0 PAS domain Herpes_UL31 PF02718.14 gi|91772450|ref|YP_565142.1| - 0.041 12.9 0.0 0.072 12.1 0.0 1.4 1 0 0 1 1 1 0 Herpesvirus UL31-like protein PAS_9 PF13426.7 gi|91772450|ref|YP_565142.1| - 0.061 13.6 0.1 0.12 12.6 0.1 1.6 1 0 0 1 1 1 0 PAS domain DUF3925 PF13063.6 gi|91772450|ref|YP_565142.1| - 0.16 12.2 0.1 0.38 11.0 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3925) DDE_Tnp_IS66 PF03050.14 gi|91772451|ref|YP_565143.1| - 1.5e-52 178.8 1.7 2.7e-52 178.0 0.0 1.9 2 0 0 2 2 2 1 Transposase IS66 family SlyX PF04102.12 gi|91772451|ref|YP_565143.1| - 3.4e-05 24.4 0.7 0.0001 22.8 0.7 1.8 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91772451|ref|YP_565143.1| - 6.1e-05 23.3 0.4 0.12 12.6 0.2 2.8 3 0 0 3 3 3 2 DDE domain GutM PF06923.11 gi|91772451|ref|YP_565143.1| - 0.067 13.3 2.1 0.76 9.9 0.0 2.7 3 0 0 3 3 3 0 Glucitol operon activator protein (GutM) PLATZ PF04640.14 gi|91772451|ref|YP_565143.1| - 0.085 13.5 1.8 0.35 11.5 0.2 2.5 1 1 1 2 2 2 0 PLATZ transcription factor BBS2_N PF14781.6 gi|91772451|ref|YP_565143.1| - 0.12 12.3 0.1 1.2 9.0 0.0 2.6 3 0 0 3 3 3 0 Ciliary BBSome complex subunit 2, N-terminal BST2 PF16716.5 gi|91772451|ref|YP_565143.1| - 0.16 12.5 3.6 0.21 12.2 1.4 2.3 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 DUF16 PF01519.16 gi|91772451|ref|YP_565143.1| - 0.26 11.8 4.8 0.37 11.3 0.2 2.7 3 0 0 3 3 3 0 Protein of unknown function DUF16 DDE_Tnp_1 PF01609.21 gi|91772453|ref|YP_565145.1| - 4.5e-06 26.5 1.3 6.7e-06 25.9 1.3 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF4283 PF14111.6 gi|91772453|ref|YP_565145.1| - 0.05 13.1 0.1 0.11 12.0 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) DUF772 PF05598.11 gi|91772453|ref|YP_565145.1| - 0.062 13.3 0.0 0.22 11.6 0.0 2.0 2 1 0 2 2 2 0 Transposase domain (DUF772) CMD PF02627.20 gi|91772454|ref|YP_565146.1| - 1.7e-09 37.6 0.0 2.6e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SelB-wing_2 PF09106.11 gi|91772454|ref|YP_565146.1| - 0.047 13.9 0.0 1.1 9.5 0.0 2.3 2 0 0 2 2 2 0 Elongation factor SelB, winged helix SSF PF00474.17 gi|91772456|ref|YP_565148.1| - 8.6e-13 47.9 11.7 1.4e-12 47.2 11.7 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family DUF4191 PF13829.6 gi|91772456|ref|YP_565148.1| - 0.15 11.4 0.5 0.27 10.6 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Peptidase_C39_2 PF13529.6 gi|91772457|ref|YP_565149.1| - 6.4e-08 33.3 0.4 8.8e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 Peptidase_C39 like family PALP PF00291.25 gi|91772459|ref|YP_565151.1| - 4.7e-69 233.0 0.1 5.3e-69 232.9 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Hexapep PF00132.24 gi|91772460|ref|YP_565152.1| - 6.7e-11 41.5 7.7 2.8e-05 23.7 1.4 2.7 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|91772460|ref|YP_565152.1| - 1.8e-06 27.6 5.5 0.0021 17.8 0.7 3.6 3 1 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase SATase_N PF06426.14 gi|91772460|ref|YP_565152.1| - 0.00065 20.0 0.0 0.0016 18.8 0.0 1.7 1 1 0 1 1 1 1 Serine acetyltransferase, N-terminal Cas_St_Csn2 PF16813.5 gi|91772460|ref|YP_565152.1| - 0.033 13.3 0.1 0.049 12.7 0.1 1.2 1 0 0 1 1 1 0 CRISPR-associated protein Csn2 subfamily St Gate PF07670.14 gi|91772462|ref|YP_565154.1| - 2.2e-07 31.1 0.5 2.2e-07 31.1 0.5 3.4 2 2 1 3 3 3 1 Nucleoside recognition FA_hydroxylase PF04116.13 gi|91772462|ref|YP_565154.1| - 2 8.7 4.3 1.7 9.0 0.0 2.6 2 1 1 3 3 3 0 Fatty acid hydroxylase superfamily DDE_Tnp_1 PF01609.21 gi|91772463|ref|YP_565155.1| - 3.3e-05 23.6 0.6 5.8e-05 22.8 0.6 1.4 1 0 0 1 1 1 1 Transposase DDE domain Hit1_C PF18268.1 gi|91772463|ref|YP_565155.1| - 0.0014 18.7 0.6 0.0034 17.5 0.6 1.6 1 0 0 1 1 1 1 Hit1 C-terminal Mg296 PF09644.10 gi|91772463|ref|YP_565155.1| - 0.013 15.6 0.8 0.035 14.2 0.8 1.8 1 0 0 1 1 1 0 Mg296 protein ASCH PF04266.14 gi|91772464|ref|YP_565156.1| - 1.5e-09 38.4 0.0 2e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 ASCH domain DNA_gyraseB PF00204.25 gi|91772465|ref|YP_565157.1| - 9.4e-60 201.0 0.7 1.5e-59 200.4 0.7 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|91772465|ref|YP_565157.1| - 8.8e-32 109.1 0.1 1.8e-31 108.1 0.1 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|91772465|ref|YP_565157.1| - 8.5e-22 77.8 0.1 2.6e-21 76.2 0.1 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|91772465|ref|YP_565157.1| - 1.4e-16 60.6 0.0 2.9e-16 59.5 0.0 1.6 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 gi|91772465|ref|YP_565157.1| - 0.00084 19.2 0.1 0.0017 18.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_topoisoIV PF00521.20 gi|91772466|ref|YP_565158.1| - 4.7e-157 523.3 1.0 6.1e-157 522.9 1.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|91772466|ref|YP_565158.1| - 8.9e-73 239.6 18.5 4.9e-15 54.7 0.5 6.5 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller ANTAR PF03861.14 gi|91772466|ref|YP_565158.1| - 0.06 13.2 0.6 0.12 12.2 0.1 1.8 2 0 0 2 2 2 0 ANTAR domain SOR_SNZ PF01680.17 gi|91772467|ref|YP_565159.1| - 3.3e-103 343.9 8.9 5.2e-103 343.2 8.9 1.3 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|91772467|ref|YP_565159.1| - 3.3e-10 39.7 6.3 9.5e-08 31.6 1.6 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG NanE PF04131.14 gi|91772467|ref|YP_565159.1| - 0.00013 21.2 2.6 0.0026 17.0 0.1 2.6 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase NMO PF03060.15 gi|91772467|ref|YP_565159.1| - 0.0013 18.2 0.5 0.0013 18.2 0.5 2.1 2 0 0 2 2 2 1 Nitronate monooxygenase TetR_C_27 PF17935.1 gi|91772467|ref|YP_565159.1| - 0.0039 17.2 0.0 0.04 14.0 0.0 2.3 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain His_biosynth PF00977.21 gi|91772467|ref|YP_565159.1| - 0.0055 16.2 0.6 0.024 14.1 0.1 2.1 2 0 0 2 2 2 1 Histidine biosynthesis protein OMPdecase PF00215.24 gi|91772467|ref|YP_565159.1| - 0.01 15.5 0.3 2.3 7.7 0.0 2.4 1 1 1 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family IGPS PF00218.21 gi|91772467|ref|YP_565159.1| - 0.021 14.0 0.1 0.17 11.0 0.0 2.1 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase TMP-TENI PF02581.17 gi|91772467|ref|YP_565159.1| - 0.031 13.6 2.1 0.76 9.1 0.2 2.4 2 0 0 2 2 2 0 Thiamine monophosphate synthase SNO PF01174.19 gi|91772468|ref|YP_565160.1| - 3.8e-55 186.7 0.1 4.2e-55 186.5 0.1 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|91772468|ref|YP_565160.1| - 4.3e-10 39.5 0.0 7.2e-10 38.8 0.0 1.3 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|91772468|ref|YP_565160.1| - 7.8e-10 38.8 0.0 1.2e-09 38.3 0.0 1.3 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_S51 PF03575.17 gi|91772468|ref|YP_565160.1| - 3.6e-06 26.8 0.0 4.8e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 Peptidase_C26 PF07722.13 gi|91772468|ref|YP_565160.1| - 0.003 17.3 0.3 0.063 13.0 0.3 2.5 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 gi|91772468|ref|YP_565160.1| - 0.011 15.6 0.1 0.019 14.8 0.1 1.4 1 0 0 1 1 1 0 DJ-1/PfpI family TM_helix PF05552.12 gi|91772469|ref|YP_565161.1| - 4.9e-26 90.4 27.1 5.7e-10 39.0 7.7 5.2 6 0 0 6 6 6 3 Conserved TM helix CCB1 PF12046.8 gi|91772470|ref|YP_565162.1| - 0.091 12.1 0.0 0.096 12.0 0.0 1.0 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B SSF PF00474.17 gi|91772471|ref|YP_565163.1| - 1.3e-61 208.7 43.3 1.6e-61 208.4 43.3 1.1 1 0 0 1 1 1 1 Sodium:solute symporter family ATP19 PF11022.8 gi|91772471|ref|YP_565163.1| - 4.2 7.8 5.5 2 8.8 0.2 3.4 2 1 1 3 3 3 0 ATP synthase subunit K DUF1638 PF07796.11 gi|91772472|ref|YP_565164.1| - 7.2e-39 133.4 0.0 1e-38 133.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) CTP_transf_like PF01467.26 gi|91772473|ref|YP_565165.1| - 4.5e-21 75.6 0.0 5.1e-21 75.4 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|91772473|ref|YP_565165.1| - 0.043 13.7 0.2 0.13 12.1 0.2 2.1 1 1 0 1 1 1 0 FAD synthetase Aminotran_1_2 PF00155.21 gi|91772474|ref|YP_565166.1| - 3.4e-68 230.5 0.0 3.8e-68 230.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|91772474|ref|YP_565166.1| - 2.9e-05 23.5 0.0 4.5e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|91772474|ref|YP_565166.1| - 0.00047 19.2 0.0 0.00086 18.4 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|91772474|ref|YP_565166.1| - 0.0025 16.4 0.0 0.0042 15.7 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|91772474|ref|YP_565166.1| - 0.006 15.9 0.0 0.013 14.8 0.0 1.5 1 0 0 1 1 1 1 Beta-eliminating lyase Rsbr_N PF08678.10 gi|91772474|ref|YP_565166.1| - 0.011 15.8 0.1 0.068 13.2 0.0 2.1 2 0 0 2 2 2 0 Rsbr N terminal DMRL_synthase PF00885.19 gi|91772475|ref|YP_565167.1| - 1.1e-30 106.3 0.5 1.2e-30 106.1 0.5 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Na_Ca_ex PF01699.24 gi|91772476|ref|YP_565168.1| - 2.8e-59 199.4 45.0 2.4e-30 105.5 19.7 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein DUF2254 PF10011.9 gi|91772476|ref|YP_565168.1| - 0.26 10.1 5.6 0.57 8.9 5.6 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) E1-E2_ATPase PF00122.20 gi|91772477|ref|YP_565169.1| - 3.6e-51 173.2 0.2 3.6e-51 173.2 0.2 3.4 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|91772477|ref|YP_565169.1| - 1e-42 145.9 4.3 1e-42 145.9 4.3 2.3 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|91772477|ref|YP_565169.1| - 6.6e-20 72.3 1.4 6.9e-19 69.0 1.4 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|91772477|ref|YP_565169.1| - 2.9e-15 56.1 0.0 6.5e-15 55.0 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|91772477|ref|YP_565169.1| - 4.9e-10 39.6 1.2 4.8e-05 23.2 1.2 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|91772477|ref|YP_565169.1| - 1.8e-07 30.8 0.2 6.3e-07 29.0 0.0 2.1 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus HAD PF12710.7 gi|91772477|ref|YP_565169.1| - 0.0011 19.4 0.0 0.011 16.1 0.0 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase SPC12 PF06645.13 gi|91772477|ref|YP_565169.1| - 4.8 7.4 9.9 0.64 10.1 4.7 2.3 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Archaeal_AmoA PF12942.7 gi|91772478|ref|YP_565170.1| - 0.29 10.8 7.1 0.69 9.6 7.1 1.7 1 1 0 1 1 1 0 Archaeal ammonia monooxygenase subunit A (AmoA) Glycogen_syn PF05693.13 gi|91772479|ref|YP_565171.1| - 2e-15 56.4 1.4 1.3e-07 30.6 0.0 2.7 2 1 0 2 2 2 2 Glycogen synthase Glyco_transf_4 PF13439.6 gi|91772479|ref|YP_565171.1| - 1.4e-07 31.7 0.0 2.7e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|91772479|ref|YP_565171.1| - 0.00046 19.8 0.1 0.0022 17.5 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|91772479|ref|YP_565171.1| - 0.14 12.6 0.0 0.44 11.0 0.0 1.8 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF4921 PF16268.5 gi|91772480|ref|YP_565172.1| - 3.8e-15 55.6 0.0 2.2e-11 43.2 0.0 2.8 2 1 0 2 2 2 2 Domain of unknown function (DUF4921) GalP_UDP_transf PF01087.22 gi|91772480|ref|YP_565172.1| - 2.1e-10 41.4 0.0 3.7e-09 37.3 0.0 2.1 1 1 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, N-terminal domain DUF4931 PF16285.5 gi|91772480|ref|YP_565172.1| - 5.3e-07 29.2 0.6 1.8e-06 27.4 0.0 2.1 2 1 0 2 2 2 1 Domain of unknown function (DUF4931) DcpS_C PF11969.8 gi|91772480|ref|YP_565172.1| - 1.1e-05 25.8 0.4 7e-05 23.3 0.0 2.2 3 0 0 3 3 3 1 Scavenger mRNA decapping enzyme C-term binding GalP_UDP_tr_C PF02744.17 gi|91772480|ref|YP_565172.1| - 1.3e-05 25.0 0.0 2.1e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, C-terminal domain HIT PF01230.23 gi|91772480|ref|YP_565172.1| - 2.9e-05 24.7 0.0 0.13 13.0 0.0 2.3 2 0 0 2 2 2 2 HIT domain PY_rept_46 PF09689.10 gi|91772480|ref|YP_565172.1| - 0.0065 17.0 0.4 0.014 16.0 0.4 1.5 1 0 0 1 1 1 1 Plasmodium yoelii repeat (PY_rept_46) DUF4406 PF14359.6 gi|91772480|ref|YP_565172.1| - 0.082 13.4 0.0 0.16 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4406) Glycos_transf_1 PF00534.20 gi|91772481|ref|YP_565173.1| - 5.9e-27 94.3 0.0 1.6e-26 92.9 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|91772481|ref|YP_565173.1| - 7.5e-27 94.4 0.1 1.2e-26 93.7 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|91772481|ref|YP_565173.1| - 9.2e-25 87.6 0.0 1.5e-24 86.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|91772481|ref|YP_565173.1| - 6.9e-18 65.6 0.0 9.7e-18 65.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|91772481|ref|YP_565173.1| - 9.9e-15 54.9 1.2 1.6e-12 47.7 1.2 2.2 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_4_2 PF13477.6 gi|91772481|ref|YP_565173.1| - 3.5e-09 36.8 0.0 7.2e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|91772481|ref|YP_565173.1| - 0.0014 19.0 0.0 0.0031 17.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_hydro_57 PF03065.15 gi|91772482|ref|YP_565174.1| - 9.6e-42 143.3 1.5 9.9e-41 140.0 1.5 2.3 1 1 1 2 2 2 1 Glycosyl hydrolase family 57 Glyco_hydro_57 PF03065.15 gi|91772483|ref|YP_565175.1| - 3e-65 220.6 0.0 4e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Glyco_hydro_15 PF00723.21 gi|91772484|ref|YP_565176.1| - 3e-16 59.2 0.0 1.6e-06 27.2 0.1 3.5 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 DUF3938 PF13074.6 gi|91772484|ref|YP_565176.1| - 0.026 14.7 0.0 0.1 12.9 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3938) GDE_C PF06202.14 gi|91772485|ref|YP_565177.1| - 4.5e-132 440.6 0.0 6.4e-132 440.1 0.0 1.1 1 0 0 1 1 1 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|91772485|ref|YP_565177.1| - 1.8e-72 243.3 0.0 2.7e-72 242.8 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.13 gi|91772485|ref|YP_565177.1| - 1.8e-05 24.1 1.0 3e-05 23.4 1.0 1.2 1 0 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Glyco_hydro_100 PF12899.7 gi|91772485|ref|YP_565177.1| - 0.00011 21.1 0.1 0.12 11.0 0.0 2.4 2 1 0 2 2 2 2 Alkaline and neutral invertase CAF1-p150_C2 PF15539.6 gi|91772485|ref|YP_565177.1| - 0.19 11.2 0.0 0.44 10.0 0.0 1.5 2 0 0 2 2 2 0 CAF1 complex subunit p150, region binding to CAF1-p60 at C-term GPDPase_memb PF10110.9 gi|91772487|ref|YP_565179.1| - 4.8e-08 32.1 18.4 0.00017 20.5 10.5 2.5 1 1 1 2 2 2 2 Membrane domain of glycerophosphoryl diester phosphodiesterase DUF624 PF04854.14 gi|91772487|ref|YP_565179.1| - 0.011 15.8 1.8 0.011 15.8 1.8 2.9 3 1 1 4 4 4 0 Protein of unknown function, DUF624 DUF92 PF01940.16 gi|91772487|ref|YP_565179.1| - 0.29 10.5 5.8 0.49 9.8 5.8 1.6 1 1 0 1 1 1 0 Integral membrane protein DUF92 NiFe_hyd_3_EhaA PF17367.2 gi|91772487|ref|YP_565179.1| - 1.6 8.9 14.8 0.63 10.2 1.2 3.3 3 0 0 3 3 3 0 NiFe-hydrogenase-type-3 Eha complex subunit A Sensor PF13796.6 gi|91772487|ref|YP_565179.1| - 2.4 8.2 14.3 35 4.4 14.3 2.2 1 1 0 1 1 1 0 Putative sensor DUF4118 PF13493.6 gi|91772487|ref|YP_565179.1| - 9.4 6.1 15.1 1.1 9.1 0.9 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4118) BEN PF10523.9 gi|91772488|ref|YP_565180.1| - 0.0023 18.1 1.2 2 8.7 0.1 2.4 2 0 0 2 2 2 2 BEN domain DUF4488 PF14869.6 gi|91772488|ref|YP_565180.1| - 0.061 13.2 3.2 0.12 12.3 0.6 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4488) TMPIT PF07851.13 gi|91772488|ref|YP_565180.1| - 0.076 12.2 3.2 0.12 11.6 3.2 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF2935 PF11155.8 gi|91772488|ref|YP_565180.1| - 0.087 13.2 0.6 0.28 11.5 0.6 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) COG2 PF06148.11 gi|91772488|ref|YP_565180.1| - 4.1 7.5 8.8 0.33 11.0 1.2 2.7 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 NucS PF01939.16 gi|91772490|ref|YP_565182.1| - 1.3e-05 24.6 0.7 2.7e-05 23.6 0.1 1.7 1 1 1 2 2 2 1 Endonuclease NucS PDDEXK_10 PF07788.11 gi|91772490|ref|YP_565182.1| - 0.042 13.8 0.0 0.11 12.4 0.0 1.7 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily DUF1967 PF09269.11 gi|91772490|ref|YP_565182.1| - 0.1 12.6 0.0 0.27 11.2 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) DDE_Tnp_1 PF01609.21 gi|91772491|ref|YP_565183.1| - 8e-16 58.3 5.7 9.6e-16 58.1 5.7 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.6 gi|91772491|ref|YP_565183.1| - 0.0021 18.4 1.6 0.0027 18.0 0.8 1.7 2 0 0 2 2 2 1 Transposase DDE domain tRNA_synthFbeta PF17759.1 gi|91772492|ref|YP_565184.1| - 3.1e-43 147.7 0.1 4.8e-43 147.1 0.1 1.3 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|91772492|ref|YP_565184.1| - 1.7e-16 60.3 0.6 5.3e-16 58.7 0.1 2.2 2 0 0 2 2 2 1 tRNA synthetase B5 domain B3_4 PF03483.17 gi|91772492|ref|YP_565184.1| - 3.3e-14 53.0 0.0 6e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 B3/4 domain PhetRS_B1 PF18262.1 gi|91772492|ref|YP_565184.1| - 0.00047 20.3 0.5 0.47 10.7 0.0 3.4 3 2 1 4 4 4 2 Phe-tRNA synthetase beta subunit B1 domain tRNA-synt_2d PF01409.20 gi|91772492|ref|YP_565184.1| - 0.0011 18.5 0.2 0.0023 17.5 0.2 1.5 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) DUF4265 PF14085.6 gi|91772492|ref|YP_565184.1| - 0.16 11.9 0.1 4.8 7.2 0.0 2.8 4 0 0 4 4 4 0 Domain of unknown function (DUF4265) T2SSE PF00437.20 gi|91772493|ref|YP_565185.1| - 6.1e-47 159.9 0.0 9.5e-47 159.3 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein T2SSF PF00482.23 gi|91772494|ref|YP_565186.1| - 1.2e-36 125.4 3.1 3.2e-19 69.1 0.0 4.5 5 0 0 5 5 5 2 Type II secretion system (T2SS), protein F Pex24p PF06398.11 gi|91772494|ref|YP_565186.1| - 0.0036 16.3 0.0 1.6 7.6 0.0 2.6 2 2 0 2 2 2 1 Integral peroxisomal membrane peroxin Spore_III_AB PF09548.10 gi|91772494|ref|YP_565186.1| - 0.016 15.4 0.1 0.39 10.8 0.0 2.7 3 0 0 3 3 3 0 Stage III sporulation protein AB (spore_III_AB) RNA_binding PF01877.17 gi|91772494|ref|YP_565186.1| - 0.11 12.8 0.1 1.6 9.0 0.0 2.5 2 0 0 2 2 2 0 RNA binding Fer4_12 PF13353.6 gi|91772494|ref|YP_565186.1| - 0.17 12.1 0.1 0.35 11.1 0.1 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain RNase_HII PF01351.18 gi|91772495|ref|YP_565187.1| - 2.6e-47 161.3 0.0 2.9e-47 161.1 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII URO-D PF01208.17 gi|91772496|ref|YP_565188.1| - 2.9e-75 253.6 0.0 3.2e-75 253.4 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Nitroreductase PF00881.24 gi|91772497|ref|YP_565189.1| - 5.7e-26 91.6 0.0 7.1e-26 91.3 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family Fer4 PF00037.27 gi|91772497|ref|YP_565189.1| - 6.8e-09 35.2 13.3 3e-05 23.7 2.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain TM1586_NiRdase PF14512.6 gi|91772497|ref|YP_565189.1| - 3.1e-08 33.4 0.7 0.00093 18.8 0.0 3.0 2 1 1 3 3 3 2 Putative TM nitroreductase Fer4_9 PF13187.6 gi|91772497|ref|YP_565189.1| - 4.9e-08 33.0 7.0 8.7e-08 32.2 7.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91772497|ref|YP_565189.1| - 7.6e-08 32.8 5.5 0.0051 17.4 2.3 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772497|ref|YP_565189.1| - 2.9e-07 31.3 3.6 0.0066 17.4 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|91772497|ref|YP_565189.1| - 1.5e-06 28.0 15.0 0.0015 18.6 3.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91772497|ref|YP_565189.1| - 2.3e-06 27.6 7.1 0.0026 17.9 11.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772497|ref|YP_565189.1| - 0.0002 21.6 9.2 0.031 14.8 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91772497|ref|YP_565189.1| - 0.00056 20.3 10.3 0.022 15.2 1.0 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772497|ref|YP_565189.1| - 0.00072 19.6 9.7 0.051 13.7 3.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772497|ref|YP_565189.1| - 0.0016 18.4 14.1 0.0032 17.5 3.2 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91772497|ref|YP_565189.1| - 0.0071 16.9 12.8 0.58 10.7 3.1 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|91772497|ref|YP_565189.1| - 0.057 14.3 3.8 1.1 10.1 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91772497|ref|YP_565189.1| - 0.1 13.2 11.6 0.13 12.9 3.1 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|91772497|ref|YP_565189.1| - 0.16 13.0 17.9 1.6 9.8 5.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain CAP59_mtransfer PF11735.8 gi|91772497|ref|YP_565189.1| - 0.19 11.4 0.0 6.5 6.4 0.0 2.1 1 1 1 2 2 2 0 Cryptococcal mannosyltransferase 1 Fer4_18 PF13746.6 gi|91772497|ref|YP_565189.1| - 0.67 10.2 7.8 0.42 10.8 1.4 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain eIF-1a PF01176.19 gi|91772499|ref|YP_565191.1| - 3.5e-17 61.9 0.2 4.8e-17 61.5 0.2 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 PALP PF00291.25 gi|91772500|ref|YP_565192.1| - 1.8e-25 90.0 0.0 5e-25 88.5 0.0 1.6 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Thr_synth_N PF14821.6 gi|91772500|ref|YP_565192.1| - 7.4e-21 74.2 0.1 3.7e-20 71.9 0.0 2.3 2 0 0 2 2 2 1 Threonine synthase N terminus DUF3387 PF11867.8 gi|91772500|ref|YP_565192.1| - 0.029 13.7 0.0 0.049 13.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3387) Peptidase_S66C PF17676.1 gi|91772500|ref|YP_565192.1| - 0.17 12.4 0.0 1.1 9.8 0.0 2.3 1 1 1 2 2 2 0 LD-carboxypeptidase C-terminal domain DDE_Tnp_1 PF01609.21 gi|91772501|ref|YP_565193.1| - 5.7e-06 26.1 0.7 1e-05 25.3 0.7 1.4 1 0 0 1 1 1 1 Transposase DDE domain Hit1_C PF18268.1 gi|91772501|ref|YP_565193.1| - 0.0014 18.7 0.6 0.0036 17.4 0.6 1.6 1 0 0 1 1 1 1 Hit1 C-terminal Mg296 PF09644.10 gi|91772501|ref|YP_565193.1| - 0.014 15.5 0.8 0.037 14.2 0.8 1.8 1 0 0 1 1 1 0 Mg296 protein DUF4283 PF14111.6 gi|91772502|ref|YP_565194.1| - 0.07 12.6 0.1 0.14 11.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) DUF772 PF05598.11 gi|91772502|ref|YP_565194.1| - 0.12 12.5 0.0 0.51 10.4 0.0 2.1 2 1 0 2 2 2 0 Transposase domain (DUF772) GATase_5 PF13507.6 gi|91772504|ref|YP_565196.1| - 1.6e-47 161.8 0.0 1.9e-47 161.6 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|91772504|ref|YP_565196.1| - 1.2e-10 41.5 0.0 1.8e-10 40.8 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.14 gi|91772504|ref|YP_565196.1| - 2.1e-10 40.5 0.0 4.2e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|91772504|ref|YP_565196.1| - 1.8e-08 34.4 0.0 2.7e-08 33.8 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|91772504|ref|YP_565196.1| - 4.9e-06 26.5 0.0 2.7e-05 24.1 0.0 1.9 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|91772504|ref|YP_565196.1| - 0.00041 20.2 0.0 0.0012 18.7 0.0 1.7 1 1 0 1 1 1 1 Peptidase C26 PurS PF02700.14 gi|91772505|ref|YP_565197.1| - 1.6e-25 89.1 0.0 1.7e-25 89.0 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase DAHP_snth_FXD PF18152.1 gi|91772505|ref|YP_565197.1| - 0.087 12.7 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 DAHP synthase ferredoxin-like domain ThiS PF02597.20 gi|91772505|ref|YP_565197.1| - 0.16 12.6 0.0 0.21 12.2 0.0 1.3 1 1 0 1 1 1 0 ThiS family CDP-OH_P_transf PF01066.21 gi|91772506|ref|YP_565198.1| - 1.1e-08 35.7 3.2 1.1e-08 35.7 3.2 2.6 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF4083 PF13314.6 gi|91772506|ref|YP_565198.1| - 0.68 9.9 6.3 1.1 9.2 0.6 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4083) TPR_1 PF00515.28 gi|91772507|ref|YP_565199.1| - 3e-35 118.6 9.0 7.2e-08 31.9 0.1 4.9 6 0 0 6 6 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|91772507|ref|YP_565199.1| - 9.2e-32 106.6 0.4 4.5e-07 29.5 0.1 4.7 4 1 0 4 4 4 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|91772507|ref|YP_565199.1| - 1.6e-27 94.9 9.2 2e-09 37.0 0.1 4.7 3 1 1 4 4 4 4 TPR repeat TPR_8 PF13181.6 gi|91772507|ref|YP_565199.1| - 5.1e-24 82.4 5.6 2e-06 27.6 0.1 4.8 5 0 0 5 5 4 4 Tetratricopeptide repeat TPR_17 PF13431.6 gi|91772507|ref|YP_565199.1| - 1e-20 72.5 2.2 0.00026 21.1 0.0 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.6 gi|91772507|ref|YP_565199.1| - 1.5e-18 66.9 0.4 2.1e-05 24.7 0.0 3.9 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|91772507|ref|YP_565199.1| - 2.8e-17 61.4 0.3 0.0026 17.7 0.0 4.7 5 0 0 5 5 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|91772507|ref|YP_565199.1| - 2.9e-12 46.3 0.0 0.042 14.7 0.0 5.0 2 1 3 5 5 5 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|91772507|ref|YP_565199.1| - 3.2e-11 43.7 0.0 0.0003 21.4 0.0 4.0 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|91772507|ref|YP_565199.1| - 4.2e-10 40.0 0.0 0.00029 21.3 0.2 3.6 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_9 PF13371.6 gi|91772507|ref|YP_565199.1| - 8.2e-10 38.7 0.0 0.0074 16.4 0.0 3.8 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|91772507|ref|YP_565199.1| - 1.8e-07 30.8 0.3 0.38 10.7 0.0 4.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|91772507|ref|YP_565199.1| - 2.4e-06 27.8 0.0 0.19 12.4 0.0 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat MIT PF04212.18 gi|91772507|ref|YP_565199.1| - 3e-05 24.0 0.6 0.45 10.6 0.0 3.6 3 0 0 3 3 3 1 MIT (microtubule interacting and transport) domain Coatomer_E PF04733.14 gi|91772507|ref|YP_565199.1| - 0.00015 21.3 0.3 0.018 14.5 0.5 2.1 1 1 1 2 2 2 2 Coatomer epsilon subunit ANAPC3 PF12895.7 gi|91772507|ref|YP_565199.1| - 0.00017 21.7 2.3 0.14 12.4 0.9 2.7 1 1 2 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 gi|91772507|ref|YP_565199.1| - 0.00074 19.5 1.7 2.5 8.2 0.0 4.0 3 1 1 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat DUF3856 PF12968.7 gi|91772507|ref|YP_565199.1| - 0.0029 17.7 0.0 2.6 8.1 0.0 3.1 1 1 2 3 3 3 1 Domain of Unknown Function (DUF3856) NARP1 PF12569.8 gi|91772507|ref|YP_565199.1| - 0.004 16.1 1.9 0.77 8.6 0.0 2.2 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 PPR PF01535.20 gi|91772507|ref|YP_565199.1| - 0.015 15.5 0.2 35 4.9 0.0 3.7 3 0 0 3 3 3 0 PPR repeat Gla PF00594.20 gi|91772507|ref|YP_565199.1| - 0.02 15.1 0.2 0.11 12.7 0.1 2.3 2 0 0 2 2 2 0 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain SRP_TPR_like PF17004.5 gi|91772507|ref|YP_565199.1| - 0.022 14.8 1.6 0.96 9.5 0.1 2.7 1 1 1 2 2 2 0 Putative TPR-like repeat Paf67 PF10255.9 gi|91772507|ref|YP_565199.1| - 0.054 12.5 0.0 0.38 9.7 0.1 1.9 2 0 0 2 2 2 0 RNA polymerase I-associated factor PAF67 NRBF2_MIT PF17169.4 gi|91772507|ref|YP_565199.1| - 0.064 13.5 1.6 9.1 6.6 0.1 3.1 2 1 1 3 3 3 0 MIT domain of nuclear receptor-binding factor 2 Asn_synthase PF00733.21 gi|91772508|ref|YP_565200.1| - 1.6e-42 146.5 0.1 6.4e-23 82.0 0.0 2.1 1 1 1 2 2 2 2 Asparagine synthase GATase_7 PF13537.6 gi|91772508|ref|YP_565200.1| - 7.4e-09 35.6 0.0 2.3e-08 34.0 0.0 1.9 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|91772508|ref|YP_565200.1| - 0.00021 21.5 0.0 0.00089 19.5 0.0 2.2 2 1 0 2 2 2 1 Glutamine amidotransferase domain NAD_synthase PF02540.17 gi|91772508|ref|YP_565200.1| - 0.013 14.6 0.0 0.025 13.7 0.0 1.4 1 0 0 1 1 1 0 NAD synthase DUF3458_C PF17432.2 gi|91772508|ref|YP_565200.1| - 0.07 12.5 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3458_C) ARM repeats Diphthami_syn_2 PF01902.17 gi|91772509|ref|YP_565201.1| - 1.4e-67 227.4 0.1 1.7e-67 227.1 0.1 1.0 1 0 0 1 1 1 1 Diphthamide synthase Proteasome PF00227.26 gi|91772509|ref|YP_565201.1| - 0.13 11.7 0.0 0.25 10.8 0.0 1.4 1 0 0 1 1 1 0 Proteasome subunit Multi-haem_cyto PF13447.6 gi|91772510|ref|YP_565202.1| - 2.2e-37 128.8 17.1 2e-35 122.3 4.0 3.0 2 1 1 3 3 3 2 Seven times multi-haem cytochrome CxxCH Cytochrome_C7 PF14522.6 gi|91772510|ref|YP_565202.1| - 4.4e-11 42.6 32.3 3.6e-05 23.7 5.1 4.6 2 2 0 3 3 3 3 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 gi|91772510|ref|YP_565202.1| - 8.8e-08 32.5 36.3 0.096 13.2 8.9 5.6 1 1 3 4 4 4 4 Cytochrome c3 Cytochrome_C554 PF13435.6 gi|91772510|ref|YP_565202.1| - 2.1e-07 31.8 31.4 0.0015 19.4 1.1 5.9 4 1 2 6 6 6 3 Cytochrome c554 and c-prime Paired_CXXCH_1 PF09699.10 gi|91772510|ref|YP_565202.1| - 4.6e-06 26.3 34.5 0.34 10.7 6.5 6.8 4 4 2 6 6 6 5 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_NNT PF03264.14 gi|91772510|ref|YP_565202.1| - 0.0067 16.1 26.4 0.12 12.1 1.3 5.2 1 1 3 4 4 4 3 NapC/NirT cytochrome c family, N-terminal region Cytochrom_C552 PF02335.15 gi|91772510|ref|YP_565202.1| - 0.077 11.9 28.1 0.054 12.4 8.1 3.7 2 2 1 3 3 3 0 Cytochrome c552 Cytochrom_CIII PF02085.16 gi|91772510|ref|YP_565202.1| - 0.083 13.2 38.2 0.86 10.0 7.2 5.5 2 2 4 6 6 6 0 Class III cytochrome C family Cytochrome_CBB3 PF13442.6 gi|91772510|ref|YP_565202.1| - 3.8 7.9 38.4 2.2 8.7 0.5 7.8 4 2 1 5 5 5 0 Cytochrome C oxidase, cbb3-type, subunit III MPS2 PF17060.5 gi|91772511|ref|YP_565203.1| - 3.5e-05 23.3 0.9 3.5e-05 23.3 0.9 1.0 1 0 0 1 1 1 1 Monopolar spindle protein 2 FAM76 PF16046.5 gi|91772511|ref|YP_565203.1| - 9.5e-05 21.9 0.1 0.00011 21.7 0.1 1.1 1 0 0 1 1 1 1 FAM76 protein DivIC PF04977.15 gi|91772511|ref|YP_565203.1| - 0.0035 17.1 0.6 0.0055 16.4 0.6 1.3 1 0 0 1 1 1 1 Septum formation initiator HAP1_N PF04849.13 gi|91772511|ref|YP_565203.1| - 0.0042 16.3 0.3 0.0048 16.2 0.3 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region Sec2p PF06428.11 gi|91772511|ref|YP_565203.1| - 0.0063 16.5 0.9 0.0082 16.1 0.9 1.2 1 0 0 1 1 1 1 GDP/GTP exchange factor Sec2p Syntaxin_2 PF14523.6 gi|91772511|ref|YP_565203.1| - 0.0072 16.7 1.1 0.01 16.2 1.1 1.3 1 1 0 1 1 1 1 Syntaxin-like protein Spc29 PF17082.5 gi|91772511|ref|YP_565203.1| - 0.0082 16.0 0.2 0.0087 15.9 0.2 1.0 1 0 0 1 1 1 1 Spindle Pole Component 29 Phage_GP20 PF06810.11 gi|91772511|ref|YP_565203.1| - 0.014 15.2 0.4 0.017 14.9 0.4 1.2 1 0 0 1 1 1 0 Phage minor structural protein GP20 Med4 PF10018.9 gi|91772511|ref|YP_565203.1| - 0.015 15.0 0.2 0.016 14.9 0.2 1.1 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Spc7 PF08317.11 gi|91772511|ref|YP_565203.1| - 0.017 14.0 0.2 0.017 14.0 0.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein HalX PF08663.10 gi|91772511|ref|YP_565203.1| - 0.021 15.1 0.2 0.039 14.3 0.2 1.6 1 1 0 1 1 1 0 HalX domain UPF0242 PF06785.11 gi|91772511|ref|YP_565203.1| - 0.022 14.9 0.8 0.024 14.7 0.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus BLOC1_2 PF10046.9 gi|91772511|ref|YP_565203.1| - 0.033 14.5 2.2 0.046 14.0 2.1 1.3 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SlyX PF04102.12 gi|91772511|ref|YP_565203.1| - 0.035 14.7 1.5 0.86 10.3 1.1 2.0 1 1 1 2 2 2 0 SlyX ATG16 PF08614.11 gi|91772511|ref|YP_565203.1| - 0.037 14.3 0.0 0.043 14.1 0.0 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF948 PF06103.11 gi|91772511|ref|YP_565203.1| - 0.04 14.2 0.0 0.054 13.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF724 PF05266.14 gi|91772511|ref|YP_565203.1| - 0.08 12.8 0.2 0.095 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Sterile PF03015.19 gi|91772511|ref|YP_565203.1| - 0.13 12.5 0.1 3.4 8.0 0.0 2.0 1 1 1 2 2 2 0 Male sterility protein XhlA PF10779.9 gi|91772511|ref|YP_565203.1| - 0.27 11.5 2.5 0.45 10.8 2.0 1.4 1 1 0 1 1 1 0 Haemolysin XhlA FlxA PF14282.6 gi|91772511|ref|YP_565203.1| - 0.32 11.0 4.3 1.3 9.1 4.2 1.8 1 1 0 1 1 1 0 FlxA-like protein Pox_A_type_inc PF04508.12 gi|91772511|ref|YP_565203.1| - 2.1 8.3 4.8 5.1 7.1 0.9 2.8 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat PK PF00224.21 gi|91772512|ref|YP_565204.1| - 1.8e-118 395.4 2.0 2.4e-118 395.0 2.0 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|91772512|ref|YP_565204.1| - 2.3e-23 82.6 0.0 1.7e-22 79.9 0.0 2.4 2 1 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 gi|91772512|ref|YP_565204.1| - 0.0014 17.8 0.2 0.01 15.0 0.1 2.1 2 0 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family IMPDH PF00478.25 gi|91772512|ref|YP_565204.1| - 0.0024 16.9 0.0 0.045 12.7 0.0 2.4 2 1 1 3 3 3 1 IMP dehydrogenase / GMP reductase domain CCG PF02754.16 gi|91772513|ref|YP_565205.1| - 1.9e-21 76.0 0.7 3.1e-13 49.7 0.1 2.7 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|91772513|ref|YP_565205.1| - 1.2e-09 38.4 2.6 1.2e-09 38.4 2.6 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772513|ref|YP_565205.1| - 2.5e-06 28.3 5.4 2.9e-06 28.1 3.3 2.3 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|91772513|ref|YP_565205.1| - 4.3e-06 27.2 3.1 4.3e-06 27.2 3.1 2.4 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91772513|ref|YP_565205.1| - 0.0003 20.9 8.7 0.069 13.3 0.2 3.3 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91772513|ref|YP_565205.1| - 0.0013 19.3 11.2 0.0046 17.5 7.9 3.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772513|ref|YP_565205.1| - 0.0016 18.5 19.5 0.018 15.2 0.8 4.0 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772513|ref|YP_565205.1| - 0.013 16.0 1.9 0.013 16.0 1.9 4.2 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|91772513|ref|YP_565205.1| - 0.025 14.7 4.2 0.025 14.7 4.2 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4 PF00037.27 gi|91772513|ref|YP_565205.1| - 0.97 9.4 25.9 0.15 11.9 2.0 3.5 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91772513|ref|YP_565205.1| - 1.2 9.3 9.4 4.9 7.4 0.6 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772513|ref|YP_565205.1| - 6.6 7.1 22.5 0.26 11.5 2.5 3.6 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91772513|ref|YP_565205.1| - 6.7 6.9 15.4 13 6.0 10.9 3.3 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91772513|ref|YP_565205.1| - 9.6 7.4 15.2 4 8.6 0.8 3.4 3 0 0 3 3 2 0 4Fe-4S binding domain GntP_permease PF02447.16 gi|91772514|ref|YP_565206.1| - 1.4e-22 80.1 31.4 7.5e-22 77.6 31.4 1.8 1 1 0 1 1 1 1 GntP family permease FixP_N PF14715.6 gi|91772514|ref|YP_565206.1| - 2.1 8.2 9.2 1.1 9.1 1.1 2.9 2 0 0 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Macro PF01661.21 gi|91772515|ref|YP_565207.1| - 2.4e-45 153.4 0.3 3.8e-45 152.7 0.3 1.3 1 0 0 1 1 1 1 Macro domain MS_channel PF00924.18 gi|91772517|ref|YP_565209.1| - 3.8e-33 114.8 1.9 3.8e-33 114.8 1.9 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel DUF2023 PF09633.10 gi|91772517|ref|YP_565209.1| - 0.02 15.0 0.1 0.064 13.4 0.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2023) AgrB PF04647.15 gi|91772517|ref|YP_565209.1| - 0.36 10.1 11.0 0.62 9.3 11.0 1.3 1 0 0 1 1 1 0 Accessory gene regulator B DUF4199 PF13858.6 gi|91772517|ref|YP_565209.1| - 0.42 11.0 7.2 0.63 10.4 6.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) DUF4271 PF14093.6 gi|91772517|ref|YP_565209.1| - 0.77 9.6 11.6 1.2 9.0 11.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) Phage_holin_5_2 PF16079.5 gi|91772517|ref|YP_565209.1| - 1.9 8.9 8.6 2.6 8.5 3.6 2.8 1 1 1 2 2 2 0 Phage holin family Hol44, in holin superfamily V TMEM208_SND2 PF05620.11 gi|91772517|ref|YP_565209.1| - 8.4 6.1 9.1 3.7 7.3 0.4 2.2 1 1 1 2 2 2 0 SRP-independent targeting protein 2/TMEM208 DUF432 PF04254.13 gi|91772518|ref|YP_565210.1| - 2.9e-46 156.6 0.7 4.4e-46 156.1 0.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF432) MS_channel PF00924.18 gi|91772519|ref|YP_565211.1| - 2.2e-51 174.3 6.5 3.2e-51 173.8 6.5 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel PsiE PF06146.12 gi|91772520|ref|YP_565212.1| - 3.5e-11 43.3 5.6 3.5e-11 43.3 5.6 2.0 2 0 0 2 2 2 1 Phosphate-starvation-inducible E DUF3852 PF12963.7 gi|91772520|ref|YP_565212.1| - 0.071 13.5 1.5 0.071 13.5 1.5 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF3852) EMC3_TMCO1 PF01956.16 gi|91772520|ref|YP_565212.1| - 0.63 9.8 5.3 7 6.4 0.5 3.0 3 0 0 3 3 3 0 Integral membrane protein EMC3/TMCO1-like DDE_Tnp_IS66 PF03050.14 gi|91772521|ref|YP_565213.1| - 3.4e-54 184.2 1.0 8.2e-54 183.0 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family SlyX PF04102.12 gi|91772521|ref|YP_565213.1| - 0.00011 22.7 0.6 0.00035 21.1 0.6 1.8 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91772521|ref|YP_565213.1| - 0.00016 21.9 0.3 0.12 12.6 0.2 2.8 3 0 0 3 3 3 2 DDE domain GutM PF06923.11 gi|91772521|ref|YP_565213.1| - 0.053 13.6 0.2 2.3 8.3 0.0 2.6 2 0 0 2 2 2 0 Glucitol operon activator protein (GutM) BBS2_N PF14781.6 gi|91772521|ref|YP_565213.1| - 0.16 11.9 0.0 1.5 8.8 0.0 2.5 3 0 0 3 3 3 0 Ciliary BBSome complex subunit 2, N-terminal PLATZ PF04640.14 gi|91772521|ref|YP_565213.1| - 0.34 11.6 3.4 0.34 11.5 0.2 2.4 2 1 1 3 3 3 0 PLATZ transcription factor BST2 PF16716.5 gi|91772521|ref|YP_565213.1| - 0.36 11.4 3.3 0.49 11.0 1.2 2.3 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 DUF16 PF01519.16 gi|91772521|ref|YP_565213.1| - 0.43 11.1 5.0 0.52 10.8 0.2 2.7 3 0 0 3 3 3 0 Protein of unknown function DUF16 TIR_2 PF13676.6 gi|91772522|ref|YP_565214.1| - 3.7e-17 63.0 0.0 5e-17 62.6 0.0 1.2 1 0 0 1 1 1 1 TIR domain DUF1863 PF08937.11 gi|91772522|ref|YP_565214.1| - 1e-06 29.1 0.1 4.1e-06 27.1 0.1 2.0 1 1 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) DUF4062 PF13271.6 gi|91772522|ref|YP_565214.1| - 0.0011 19.3 0.2 0.0025 18.2 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4062) Nuc_deoxyrib_tr PF05014.15 gi|91772522|ref|YP_565214.1| - 0.0055 16.7 0.0 0.0069 16.4 0.0 1.3 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase TIR PF01582.20 gi|91772522|ref|YP_565214.1| - 0.024 14.4 0.3 0.029 14.2 0.3 1.4 1 1 0 1 1 1 0 TIR domain Dioxygenase_N PF04444.14 gi|91772522|ref|YP_565214.1| - 0.036 13.9 0.1 0.24 11.3 0.1 2.0 1 1 1 2 2 2 0 Catechol dioxygenase N terminus AlbA_2 PF04326.14 gi|91772523|ref|YP_565215.1| - 1.4e-21 77.1 0.8 2.7e-21 76.2 0.1 1.9 2 0 0 2 2 1 1 Putative DNA-binding domain HATPase_c_4 PF13749.6 gi|91772523|ref|YP_565215.1| - 1.6e-14 53.8 0.0 4e-14 52.5 0.0 1.7 1 0 0 1 1 1 1 Putative ATP-dependent DNA helicase recG C-terminal HTH_24 PF13412.6 gi|91772523|ref|YP_565215.1| - 1.2e-11 44.0 0.4 2.9e-11 42.7 0.1 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|91772523|ref|YP_565215.1| - 5.7e-05 23.0 0.5 0.00029 20.7 0.1 2.2 2 0 0 2 2 2 1 HTH domain HTH_5 PF01022.20 gi|91772523|ref|YP_565215.1| - 0.0001 22.1 0.0 0.00017 21.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family FaeA PF04703.12 gi|91772523|ref|YP_565215.1| - 0.0009 19.6 0.1 0.0034 17.7 0.0 1.9 2 0 0 2 2 2 1 FaeA-like protein HTH_20 PF12840.7 gi|91772523|ref|YP_565215.1| - 0.0011 18.9 0.0 0.0023 18.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|91772523|ref|YP_565215.1| - 0.0083 16.1 0.0 0.024 14.6 0.0 1.8 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|91772523|ref|YP_565215.1| - 0.033 14.4 0.1 4.2 7.6 0.0 3.3 3 1 0 3 3 3 0 B-block binding subunit of TFIIIC HTH_AsnC-type PF13404.6 gi|91772523|ref|YP_565215.1| - 0.038 13.8 0.0 0.098 12.5 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_DeoR PF08220.12 gi|91772523|ref|YP_565215.1| - 0.043 13.5 0.2 0.18 11.6 0.0 1.9 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain Rrf2 PF02082.20 gi|91772523|ref|YP_565215.1| - 0.066 13.6 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator MarR PF01047.22 gi|91772523|ref|YP_565215.1| - 0.077 12.9 0.5 0.45 10.5 0.1 2.1 2 0 0 2 2 2 0 MarR family HTH_39 PF14090.6 gi|91772523|ref|YP_565215.1| - 0.11 12.2 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|91772523|ref|YP_565215.1| - 0.12 12.2 0.0 0.49 10.3 0.0 1.9 2 0 0 2 2 2 0 MarR family N6_Mtase PF02384.16 gi|91772524|ref|YP_565216.1| - 1.4e-118 395.7 0.1 1.9e-118 395.3 0.1 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|91772524|ref|YP_565216.1| - 4.6e-21 75.9 4.5 1.3e-20 74.4 4.5 1.9 1 0 0 1 1 1 1 HsdM N-terminal domain Eco57I PF07669.11 gi|91772524|ref|YP_565216.1| - 0.0011 19.4 0.0 0.0065 17.0 0.0 2.4 3 0 0 3 3 3 1 Eco57I restriction-modification methylase DUF2487 PF10673.9 gi|91772524|ref|YP_565216.1| - 0.079 13.0 0.3 0.73 9.9 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2487) DEAD PF00270.29 gi|91772525|ref|YP_565217.1| - 3.2e-27 95.4 0.0 5.2e-27 94.7 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF1998 PF09369.10 gi|91772525|ref|YP_565217.1| - 1.5e-18 67.3 0.1 6.3e-18 65.3 0.1 2.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) TPR_2 PF07719.17 gi|91772525|ref|YP_565217.1| - 3.7e-17 61.0 1.1 3.2e-06 26.8 0.1 4.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 gi|91772525|ref|YP_565217.1| - 1.1e-15 56.7 9.3 1.6e-06 27.6 0.1 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat Helicase_C PF00271.31 gi|91772525|ref|YP_565217.1| - 7e-12 45.7 0.0 2e-11 44.2 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain TPR_11 PF13414.6 gi|91772525|ref|YP_565217.1| - 9.8e-11 41.2 0.2 0.00012 21.7 0.0 2.9 2 0 0 2 2 2 2 TPR repeat TPR_12 PF13424.6 gi|91772525|ref|YP_565217.1| - 1.1e-08 35.2 0.0 0.0002 21.5 0.0 2.8 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|91772525|ref|YP_565217.1| - 4.7e-08 32.6 0.8 0.28 11.5 0.0 4.1 3 0 0 3 3 3 3 Tetratricopeptide repeat ResIII PF04851.15 gi|91772525|ref|YP_565217.1| - 7.4e-07 29.3 0.0 2e-06 27.9 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit TPR_9 PF13371.6 gi|91772525|ref|YP_565217.1| - 1.6e-05 24.9 0.1 0.005 17.0 0.0 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 gi|91772525|ref|YP_565217.1| - 3.2e-05 24.0 1.8 0.0018 18.5 0.1 3.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|91772525|ref|YP_565217.1| - 0.00011 22.7 0.0 0.7 10.9 0.1 3.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|91772525|ref|YP_565217.1| - 0.00015 22.2 0.2 0.0092 16.5 0.0 2.7 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|91772525|ref|YP_565217.1| - 0.00061 20.3 0.5 1.8 9.4 0.0 4.2 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_15 PF13429.6 gi|91772525|ref|YP_565217.1| - 0.0026 17.0 0.0 0.1 11.8 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|91772525|ref|YP_565217.1| - 0.0045 17.6 0.0 0.04 14.6 0.0 2.6 1 1 2 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|91772525|ref|YP_565217.1| - 0.045 14.0 1.5 0.091 13.0 1.5 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|91772525|ref|YP_565217.1| - 0.13 12.3 2.2 8.8 6.6 0.0 3.5 4 0 0 4 4 4 0 Tetratricopeptide repeat RelB_N PF18506.1 gi|91772525|ref|YP_565217.1| - 1.3 8.9 3.7 10 6.0 0.6 3.1 3 0 0 3 3 3 0 RelB Antitoxin alpha helical domain BPD_transp_1 PF00528.22 gi|91772527|ref|YP_565219.1| - 1e-20 74.2 14.4 1e-20 74.2 14.4 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|91772528|ref|YP_565220.1| - 9.8e-24 84.1 12.5 1.3e-23 83.7 12.5 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DUF4321 PF14209.6 gi|91772528|ref|YP_565220.1| - 0.69 9.8 10.7 0.35 10.8 3.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4321) DUF92 PF01940.16 gi|91772528|ref|YP_565220.1| - 8.7 5.7 11.4 0.58 9.5 6.0 1.7 2 0 0 2 2 2 0 Integral membrane protein DUF92 ABC_tran PF00005.27 gi|91772529|ref|YP_565221.1| - 6.9e-34 117.3 0.0 1.4e-33 116.4 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91772529|ref|YP_565221.1| - 9.6e-09 35.5 0.3 0.00038 20.4 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system CBS PF00571.28 gi|91772529|ref|YP_565221.1| - 2.2e-05 24.8 0.2 0.0039 17.6 0.1 2.9 3 0 0 3 3 2 1 CBS domain AAA_16 PF13191.6 gi|91772529|ref|YP_565221.1| - 0.00022 21.7 0.0 0.00034 21.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 gi|91772529|ref|YP_565221.1| - 0.00039 20.2 0.2 0.00085 19.1 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|91772529|ref|YP_565221.1| - 0.0013 19.0 0.0 0.0033 17.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|91772529|ref|YP_565221.1| - 0.0019 18.0 0.0 0.0036 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|91772529|ref|YP_565221.1| - 0.0026 17.5 0.0 0.0052 16.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 gi|91772529|ref|YP_565221.1| - 0.0042 17.3 0.0 0.0072 16.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain cobW PF02492.19 gi|91772529|ref|YP_565221.1| - 0.011 15.4 0.1 0.038 13.6 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 gi|91772529|ref|YP_565221.1| - 0.011 16.3 0.8 0.015 15.8 0.1 1.6 2 0 0 2 2 1 0 AAA domain AAA_24 PF13479.6 gi|91772529|ref|YP_565221.1| - 0.018 14.8 0.0 0.66 9.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|91772529|ref|YP_565221.1| - 0.02 14.0 0.0 0.037 13.1 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein Mg_chelatase PF01078.21 gi|91772529|ref|YP_565221.1| - 0.029 13.8 0.0 0.054 12.9 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 gi|91772529|ref|YP_565221.1| - 0.036 14.0 0.0 0.068 13.1 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase G-alpha PF00503.20 gi|91772529|ref|YP_565221.1| - 0.049 12.8 0.0 0.06 12.5 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit AAA_5 PF07728.14 gi|91772529|ref|YP_565221.1| - 0.068 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DEAD PF00270.29 gi|91772529|ref|YP_565221.1| - 0.082 12.7 0.0 0.36 10.6 0.0 1.9 1 1 0 1 1 1 0 DEAD/DEAH box helicase malic PF00390.19 gi|91772529|ref|YP_565221.1| - 0.093 12.5 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Malic enzyme, N-terminal domain AAA PF00004.29 gi|91772529|ref|YP_565221.1| - 0.094 13.1 0.0 0.33 11.4 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 gi|91772529|ref|YP_565221.1| - 0.17 11.2 0.0 0.31 10.3 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 gi|91772529|ref|YP_565221.1| - 0.18 12.2 0.1 0.38 11.1 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|91772529|ref|YP_565221.1| - 0.18 12.0 0.0 0.39 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain OpuAC PF04069.12 gi|91772530|ref|YP_565222.1| - 3.5e-59 200.5 0.8 4.2e-59 200.2 0.8 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system UPF0051 PF01458.17 gi|91772531|ref|YP_565223.1| - 6e-52 176.5 0.0 7.7e-52 176.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ABC_tran PF00005.27 gi|91772532|ref|YP_565224.1| - 1.1e-20 74.5 0.0 1.6e-20 74.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91772532|ref|YP_565224.1| - 2.1e-06 27.8 0.1 0.00096 19.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91772532|ref|YP_565224.1| - 0.00043 19.8 0.4 0.11 11.9 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91772532|ref|YP_565224.1| - 0.0022 17.7 0.1 0.0046 16.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|91772532|ref|YP_565224.1| - 0.0072 16.8 0.1 0.012 16.1 0.1 1.4 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|91772532|ref|YP_565224.1| - 0.0078 16.1 0.1 0.013 15.5 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 gi|91772532|ref|YP_565224.1| - 0.043 13.5 0.0 0.087 12.5 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 gi|91772532|ref|YP_565224.1| - 0.058 13.0 0.1 0.087 12.4 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|91772532|ref|YP_565224.1| - 0.097 12.2 0.1 0.16 11.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|91772532|ref|YP_565224.1| - 0.19 12.1 0.1 0.32 11.4 0.1 1.3 1 0 0 1 1 1 0 AAA ATPase domain DUF1622 PF07784.11 gi|91772534|ref|YP_565226.1| - 1.1e-24 86.1 0.1 1.1e-24 86.1 0.1 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1622) Gpr1_Fun34_YaaH PF01184.19 gi|91772534|ref|YP_565226.1| - 0.015 14.9 0.1 0.016 14.8 0.1 1.1 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family ABC_tran PF00005.27 gi|91772537|ref|YP_565229.1| - 3.5e-32 111.8 0.0 6.2e-32 111.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91772537|ref|YP_565229.1| - 1.2e-17 64.7 4.1 1.6e-12 47.9 1.3 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91772537|ref|YP_565229.1| - 5.2e-09 35.9 1.8 3.4e-06 26.7 1.8 2.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|91772537|ref|YP_565229.1| - 1.1e-05 25.4 4.9 0.0076 16.0 1.6 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA PF00004.29 gi|91772537|ref|YP_565229.1| - 9.6e-05 22.8 0.1 0.0012 19.3 0.1 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|91772537|ref|YP_565229.1| - 0.00013 21.9 0.1 0.00023 21.1 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|91772537|ref|YP_565229.1| - 0.00014 22.4 0.5 0.00023 21.7 0.5 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|91772537|ref|YP_565229.1| - 0.0005 19.8 0.0 0.001 18.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATP-synt_ab PF00006.25 gi|91772537|ref|YP_565229.1| - 0.0034 17.1 0.0 0.0046 16.6 0.0 1.3 1 1 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_16 PF13191.6 gi|91772537|ref|YP_565229.1| - 0.0045 17.4 0.0 0.0095 16.3 0.0 1.6 2 0 0 2 2 2 1 AAA ATPase domain IstB_IS21 PF01695.17 gi|91772537|ref|YP_565229.1| - 0.01 15.6 0.1 0.17 11.6 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein NACHT PF05729.12 gi|91772537|ref|YP_565229.1| - 0.011 15.6 0.2 0.061 13.2 0.1 1.9 2 0 0 2 2 2 0 NACHT domain AAA_5 PF07728.14 gi|91772537|ref|YP_565229.1| - 0.015 15.3 0.0 0.058 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 gi|91772537|ref|YP_565229.1| - 0.025 14.5 0.2 0.16 11.9 0.1 2.0 2 0 0 2 2 2 0 NTPase AAA_24 PF13479.6 gi|91772537|ref|YP_565229.1| - 0.026 14.2 0.0 0.046 13.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|91772537|ref|YP_565229.1| - 0.036 14.0 0.0 0.048 13.6 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_13 PF13166.6 gi|91772537|ref|YP_565229.1| - 0.043 12.5 0.2 3.6 6.1 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|91772537|ref|YP_565229.1| - 0.059 13.7 0.3 0.38 11.0 0.1 2.0 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|91772537|ref|YP_565229.1| - 0.078 13.2 0.0 0.82 9.9 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Rad17 PF03215.15 gi|91772537|ref|YP_565229.1| - 0.096 12.6 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain RNA_helicase PF00910.22 gi|91772537|ref|YP_565229.1| - 0.099 13.0 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Mg_chelatase PF01078.21 gi|91772537|ref|YP_565229.1| - 0.1 12.0 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI FecCD PF01032.18 gi|91772538|ref|YP_565230.1| - 4.5e-92 308.4 31.6 5.5e-92 308.1 31.6 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|91772538|ref|YP_565230.1| - 0.00025 20.7 16.3 0.00025 20.7 16.3 1.6 2 0 0 2 2 2 1 ABC 3 transport family Caveolin PF01146.17 gi|91772538|ref|YP_565230.1| - 1.6 8.7 5.7 2.6 8.0 0.6 2.9 2 1 0 2 2 2 0 Caveolin DUF1269 PF06897.12 gi|91772538|ref|YP_565230.1| - 2.2 8.6 5.1 12 6.2 5.1 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1269) Radical_SAM PF04055.21 gi|91772539|ref|YP_565231.1| - 6.4e-08 33.2 0.4 3.1e-07 30.9 0.3 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Peripla_BP_2 PF01497.18 gi|91772539|ref|YP_565231.1| - 2.9e-07 30.3 0.0 4.7e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein Fer4_12 PF13353.6 gi|91772539|ref|YP_565231.1| - 0.001 19.4 1.1 0.0022 18.3 1.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|91772539|ref|YP_565231.1| - 0.0054 16.9 0.8 0.014 15.6 0.8 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Orthopox_F7 PF05813.12 gi|91772539|ref|YP_565231.1| - 0.084 13.0 0.1 21 5.3 0.0 2.9 2 0 0 2 2 2 0 Orthopoxvirus F7 protein Methyltransf_11 PF08241.12 gi|91772540|ref|YP_565232.1| - 4.5e-22 78.5 0.0 8.2e-22 77.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91772540|ref|YP_565232.1| - 7.6e-20 71.4 0.0 1.6e-19 70.4 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|91772540|ref|YP_565232.1| - 4.2e-14 52.4 0.0 5.5e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|91772540|ref|YP_565232.1| - 5.4e-12 46.3 0.0 1.3e-11 45.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91772540|ref|YP_565232.1| - 1.5e-11 44.3 0.0 2.1e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91772540|ref|YP_565232.1| - 6.6e-08 32.6 0.0 8.4e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|91772540|ref|YP_565232.1| - 2.2e-06 27.7 0.0 3.6e-05 23.7 0.0 2.2 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_18 PF12847.7 gi|91772540|ref|YP_565232.1| - 3.4e-06 27.1 0.2 7.3e-06 26.0 0.2 1.5 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|91772540|ref|YP_565232.1| - 1.3e-05 24.7 0.1 1.9e-05 24.2 0.1 1.4 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 gi|91772540|ref|YP_565232.1| - 0.00056 19.3 0.0 0.00067 19.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_3 PF01596.17 gi|91772540|ref|YP_565232.1| - 0.0016 17.7 0.0 0.0027 16.9 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase GCD14 PF08704.10 gi|91772540|ref|YP_565232.1| - 0.0063 16.2 0.0 0.01 15.5 0.0 1.3 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit MTS PF05175.14 gi|91772540|ref|YP_565232.1| - 0.0066 16.0 0.0 0.012 15.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Met_10 PF02475.16 gi|91772540|ref|YP_565232.1| - 0.026 14.3 0.0 0.034 13.9 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_32 PF13679.6 gi|91772540|ref|YP_565232.1| - 0.027 14.5 0.1 0.056 13.4 0.0 1.5 2 0 0 2 2 2 0 Methyltransferase domain SET_assoc PF11767.8 gi|91772540|ref|YP_565232.1| - 0.037 13.7 0.0 0.069 12.8 0.0 1.5 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated TrmK PF04816.12 gi|91772540|ref|YP_565232.1| - 0.072 12.6 0.1 0.14 11.7 0.1 1.5 1 0 0 1 1 1 0 tRNA (adenine(22)-N(1))-methyltransferase PCMT PF01135.19 gi|91772540|ref|YP_565232.1| - 0.081 12.7 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_16 PF10294.9 gi|91772540|ref|YP_565232.1| - 0.11 12.2 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Peripla_BP_2 PF01497.18 gi|91772541|ref|YP_565233.1| - 2.2e-20 73.2 0.0 2.6e-20 73.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ABC_tran PF00005.27 gi|91772542|ref|YP_565234.1| - 2.8e-29 102.4 0.1 5.3e-29 101.5 0.1 1.5 1 0 0 1 1 1 1 ABC transporter CBS PF00571.28 gi|91772542|ref|YP_565234.1| - 4.6e-17 62.2 4.9 1.3e-07 31.9 0.2 2.9 3 0 0 3 3 3 2 CBS domain AAA_21 PF13304.6 gi|91772542|ref|YP_565234.1| - 0.00014 21.8 0.2 0.55 10.0 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 gi|91772542|ref|YP_565234.1| - 0.00048 19.1 1.9 0.01 14.7 0.1 2.9 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA_16 PF13191.6 gi|91772542|ref|YP_565234.1| - 0.0095 16.3 0.1 0.018 15.4 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|91772542|ref|YP_565234.1| - 0.064 13.8 0.0 0.15 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|91772542|ref|YP_565234.1| - 0.067 13.5 0.4 0.27 11.5 0.4 2.0 1 1 0 1 1 1 0 AAA domain APS_kinase PF01583.20 gi|91772542|ref|YP_565234.1| - 0.07 13.0 0.0 0.17 11.8 0.0 1.7 1 0 0 1 1 1 0 Adenylylsulphate kinase SbcCD_C PF13558.6 gi|91772542|ref|YP_565234.1| - 0.077 13.2 1.8 0.51 10.6 1.8 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|91772542|ref|YP_565234.1| - 0.096 12.4 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 gi|91772542|ref|YP_565234.1| - 0.11 11.8 0.0 0.21 10.9 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin BPD_transp_1 PF00528.22 gi|91772543|ref|YP_565235.1| - 1.1e-27 96.9 8.4 1.1e-27 96.9 8.4 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BDM PF10684.9 gi|91772543|ref|YP_565235.1| - 0.22 11.9 0.5 1.9 8.9 0.1 2.3 2 0 0 2 2 2 0 Putative biofilm-dependent modulation protein OpuAC PF04069.12 gi|91772544|ref|YP_565236.1| - 4.2e-70 236.3 1.0 4.8e-70 236.1 1.0 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Metallophos PF00149.28 gi|91772545|ref|YP_565237.1| - 1.8e-17 64.5 1.4 2.4e-17 64.1 1.4 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|91772545|ref|YP_565237.1| - 7.2e-13 49.1 1.3 2.6e-10 40.8 1.3 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Bactofilin PF04519.13 gi|91772546|ref|YP_565238.1| - 3.2e-08 33.8 12.6 0.012 15.9 0.0 3.2 1 1 2 3 3 3 3 Polymer-forming cytoskeletal FapA PF03961.13 gi|91772546|ref|YP_565238.1| - 0.0035 16.0 7.5 0.0035 16.0 7.5 2.1 1 1 1 2 2 2 2 Flagellar Assembly Protein A CstA PF02554.14 gi|91772546|ref|YP_565238.1| - 0.017 14.1 10.0 0.032 13.1 10.0 1.4 1 0 0 1 1 1 0 Carbon starvation protein CstA AlbA_2 PF04326.14 gi|91772547|ref|YP_565239.1| - 1.5e-17 64.0 0.1 3.5e-17 62.9 0.1 1.7 1 0 0 1 1 1 1 Putative DNA-binding domain HATPase_c_4 PF13749.6 gi|91772547|ref|YP_565239.1| - 0.0033 17.5 0.0 0.0095 16.1 0.0 1.8 1 0 0 1 1 1 1 Putative ATP-dependent DNA helicase recG C-terminal Med3 PF11593.8 gi|91772547|ref|YP_565239.1| - 0.15 11.2 2.6 0.24 10.5 2.6 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Methylase_S PF01420.19 gi|91772548|ref|YP_565240.1| - 4.4e-44 150.7 0.1 5e-30 104.9 0.0 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain DUF3987 PF13148.6 gi|91772548|ref|YP_565240.1| - 0.1 11.6 2.1 0.19 10.7 2.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) V-SNARE PF05008.15 gi|91772548|ref|YP_565240.1| - 7.2 7.1 10.0 22 5.5 0.4 3.3 2 1 1 3 3 3 0 Vesicle transport v-SNARE protein N-terminus EcoEI_R_C PF08463.10 gi|91772549|ref|YP_565241.1| - 1.1e-48 165.5 0.3 1.1e-48 165.5 0.3 3.1 4 0 0 4 4 4 1 EcoEI R protein C-terminal ResIII PF04851.15 gi|91772549|ref|YP_565241.1| - 8.4e-40 136.6 0.0 2.5e-39 135.0 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 gi|91772549|ref|YP_565241.1| - 5.9e-19 68.6 0.1 5.9e-19 68.6 0.1 2.0 2 1 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|91772549|ref|YP_565241.1| - 9e-11 42.1 0.1 1.4e-07 31.7 0.1 3.4 2 1 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.29 gi|91772549|ref|YP_565241.1| - 1.9e-09 37.5 0.0 8.2e-09 35.5 0.0 2.1 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|91772549|ref|YP_565241.1| - 0.00014 22.2 0.1 0.001 19.4 0.0 2.5 3 0 0 3 3 3 1 Helicase conserved C-terminal domain AAA_19 PF13245.6 gi|91772549|ref|YP_565241.1| - 0.093 13.1 0.0 0.23 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 gi|91772549|ref|YP_565241.1| - 0.097 12.1 0.0 0.21 11.0 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein HATPase_c PF02518.26 gi|91772550|ref|YP_565242.1| - 1.1e-33 116.0 0.0 2.4e-33 115.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase dCache_1 PF02743.18 gi|91772550|ref|YP_565242.1| - 3.6e-21 76.1 4.6 3.6e-21 76.1 4.6 2.4 2 1 0 2 2 2 1 Cache domain HisKA PF00512.25 gi|91772550|ref|YP_565242.1| - 1.3e-16 60.4 0.4 8.7e-16 57.7 0.1 2.6 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain sCache_2 PF17200.4 gi|91772550|ref|YP_565242.1| - 0.012 15.5 0.0 0.025 14.4 0.0 1.5 1 0 0 1 1 1 0 Single Cache domain 2 HATPase_c_5 PF14501.6 gi|91772550|ref|YP_565242.1| - 0.013 15.4 0.0 0.037 13.9 0.0 1.8 1 0 0 1 1 1 0 GHKL domain FixS PF03597.15 gi|91772550|ref|YP_565242.1| - 0.024 14.3 0.0 0.024 14.3 0.0 2.2 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type dCache_2 PF08269.11 gi|91772550|ref|YP_565242.1| - 0.025 13.7 1.8 0.076 12.2 0.0 2.2 2 0 0 2 2 2 0 Cache domain HATPase_c_2 PF13581.6 gi|91772550|ref|YP_565242.1| - 0.049 13.6 0.0 0.092 12.7 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain CoA_trans PF01144.23 gi|91772550|ref|YP_565242.1| - 0.14 11.5 0.2 1.6 8.1 0.0 2.6 3 0 0 3 3 3 0 Coenzyme A transferase Spc7 PF08317.11 gi|91772550|ref|YP_565242.1| - 0.28 10.0 2.5 0.78 8.6 0.1 2.5 3 0 0 3 3 3 0 Spc7 kinetochore protein HATPase_c PF02518.26 gi|91772551|ref|YP_565243.1| - 4.3e-09 36.9 0.1 4.8e-09 36.7 0.1 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBS PF00571.28 gi|91772552|ref|YP_565244.1| - 2.1e-16 60.1 3.2 7.8e-09 35.9 0.4 2.3 2 0 0 2 2 2 2 CBS domain HTH_3 PF01381.22 gi|91772552|ref|YP_565244.1| - 8.8e-13 48.1 0.4 2.8e-12 46.5 0.1 2.0 2 1 1 3 3 2 1 Helix-turn-helix HTH_31 PF13560.6 gi|91772552|ref|YP_565244.1| - 3.8e-10 39.9 0.3 9.5e-10 38.7 0.3 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|91772552|ref|YP_565244.1| - 3e-07 30.4 0.1 6e-07 29.4 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|91772552|ref|YP_565244.1| - 1.6e-05 25.3 0.4 5.1e-05 23.6 0.1 2.1 2 1 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 gi|91772552|ref|YP_565244.1| - 0.00015 21.5 0.1 0.00041 20.2 0.2 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|91772552|ref|YP_565244.1| - 0.0017 18.3 0.2 0.0095 15.9 0.1 2.1 2 1 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|91772552|ref|YP_565244.1| - 0.0043 16.5 0.0 1.1 8.8 0.1 2.5 2 0 0 2 2 2 2 Sigma-70, region 4 TetR_N PF00440.23 gi|91772552|ref|YP_565244.1| - 0.008 15.9 0.0 0.3 10.9 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Pou PF00157.17 gi|91772552|ref|YP_565244.1| - 0.0087 16.0 0.0 0.08 12.9 0.0 2.5 2 1 0 2 2 2 1 Pou domain - N-terminal to homeobox domain HTH_Crp_2 PF13545.6 gi|91772552|ref|YP_565244.1| - 0.11 12.5 0.1 0.25 11.3 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|91772552|ref|YP_565244.1| - 0.12 12.5 0.0 0.4 10.8 0.0 1.8 2 0 0 2 2 2 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Cadherin_5 PF17892.1 gi|91772553|ref|YP_565245.1| - 0.006 16.5 1.9 0.38 10.7 0.1 3.0 3 0 0 3 3 3 2 Cadherin-like domain Say1_Mug180 PF10340.9 gi|91772553|ref|YP_565245.1| - 0.17 10.7 0.1 0.28 10.0 0.1 1.3 1 0 0 1 1 1 0 Steryl acetyl hydrolase Aminotran_5 PF00266.19 gi|91772554|ref|YP_565246.1| - 6.4e-45 153.7 0.0 8e-45 153.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Lin0512_fam PF09585.10 gi|91772554|ref|YP_565246.1| - 0.0034 17.4 1.1 0.0077 16.3 0.4 2.0 2 0 0 2 2 2 1 Conserved hypothetical protein (Lin0512_fam) Beta_elim_lyase PF01212.21 gi|91772554|ref|YP_565246.1| - 0.028 13.7 0.3 0.047 13.0 0.3 1.5 1 1 0 1 1 1 0 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|91772554|ref|YP_565246.1| - 0.062 12.5 0.0 0.1 11.8 0.0 1.4 2 0 0 2 2 2 0 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|91772554|ref|YP_565246.1| - 0.075 12.3 0.1 0.15 11.3 0.1 1.4 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family DMRL_synthase PF00885.19 gi|91772555|ref|YP_565247.1| - 1.5e-17 63.7 0.5 1.8e-17 63.5 0.5 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase FDX-ACB PF03147.14 gi|91772555|ref|YP_565247.1| - 0.0098 16.3 0.1 0.025 15.0 0.0 1.7 2 0 0 2 2 2 1 Ferredoxin-fold anticodon binding domain zf-CDGSH PF09360.10 gi|91772556|ref|YP_565248.1| - 7.1e-32 109.4 5.5 7e-16 58.2 1.0 2.4 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 gi|91772556|ref|YP_565248.1| - 5.5e-25 87.2 0.1 1.3e-24 86.0 0.1 1.7 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4_15 PF13459.6 gi|91772556|ref|YP_565248.1| - 0.09 13.5 0.2 3.4 8.5 0.1 2.9 2 1 0 2 2 2 0 4Fe-4S single cluster domain Phage_integrase PF00589.22 gi|91772557|ref|YP_565249.1| - 0.0077 16.0 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 gi|91772557|ref|YP_565249.1| - 0.026 14.8 0.0 0.065 13.5 0.0 1.6 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain G10 PF01125.17 gi|91772559|ref|YP_565251.1| - 0.13 12.1 0.4 0.18 11.5 0.3 1.4 1 1 0 1 1 1 0 G10 protein NYN PF01936.18 gi|91772560|ref|YP_565252.1| - 4.6e-30 105.0 0.1 7.6e-30 104.3 0.1 1.3 1 0 0 1 1 1 1 NYN domain OST-HTH PF12872.7 gi|91772560|ref|YP_565252.1| - 1.7e-19 69.4 0.0 4e-19 68.2 0.0 1.6 1 0 0 1 1 1 1 OST-HTH/LOTUS domain PIN7 PF18475.1 gi|91772560|ref|YP_565252.1| - 0.024 15.3 2.8 0.21 12.2 0.1 3.3 2 2 1 3 3 3 0 PIN domain ABC2_membrane_2 PF12679.7 gi|91772562|ref|YP_565254.1| - 0.24 10.6 3.3 0.32 10.2 3.3 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein Catalase PF00199.19 gi|91772563|ref|YP_565255.1| - 2.9e-198 658.7 0.1 3.4e-198 658.4 0.1 1.0 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 gi|91772563|ref|YP_565255.1| - 2.8e-21 75.5 0.1 5.9e-21 74.4 0.1 1.6 1 0 0 1 1 1 1 Catalase-related immune-responsive EamA PF00892.20 gi|91772564|ref|YP_565256.1| - 4e-20 72.4 40.4 8.1e-13 48.7 14.3 2.0 2 0 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 gi|91772564|ref|YP_565256.1| - 4.2 7.4 6.4 2.9 8.0 0.1 3.2 3 1 1 4 4 4 0 Putative transmembrane family 234 Glyco_hydro_15 PF00723.21 gi|91772565|ref|YP_565257.1| - 2.1e-19 69.7 0.6 1.6e-14 53.5 0.3 2.6 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 Bac_rhamnosid6H PF17389.2 gi|91772565|ref|YP_565257.1| - 0.013 14.8 0.0 0.021 14.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain MarC PF01914.17 gi|91772566|ref|YP_565258.1| - 4.2e-56 189.6 17.4 4.7e-56 189.4 17.4 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein TerC PF03741.16 gi|91772566|ref|YP_565258.1| - 0.00012 21.8 15.2 0.00061 19.5 14.9 2.0 1 1 0 1 1 1 1 Integral membrane protein TerC family Adeno_E3B PF03376.14 gi|91772566|ref|YP_565258.1| - 0.023 14.9 3.4 0.023 14.9 3.4 2.4 2 0 0 2 2 2 0 Adenovirus E3B protein RseC_MucC PF04246.12 gi|91772566|ref|YP_565258.1| - 1.1 9.2 15.2 0.067 13.1 1.7 2.9 2 2 1 3 3 3 0 Positive regulator of sigma(E), RseC/MucC Serpin PF00079.20 gi|91772567|ref|YP_565259.1| - 3.1e-114 382.1 7.8 3.5e-114 382.0 7.8 1.0 1 0 0 1 1 1 1 Serpin (serine protease inhibitor) Peptidase_C39_2 PF13529.6 gi|91772568|ref|YP_565260.1| - 2.7e-11 44.2 0.8 2.7e-11 44.2 0.8 2.3 2 1 1 3 3 3 1 Peptidase_C39 like family Peptidase_C10 PF01640.17 gi|91772568|ref|YP_565260.1| - 5.2e-05 23.6 5.0 0.011 16.1 1.6 2.7 1 1 1 2 2 2 2 Peptidase C10 family Inhibitor_I69 PF13734.6 gi|91772568|ref|YP_565260.1| - 0.00048 20.5 0.3 0.0031 17.9 0.1 2.2 2 0 0 2 2 2 1 Spi protease inhibitor BtrH_N PF14399.6 gi|91772568|ref|YP_565260.1| - 0.017 15.4 0.0 0.041 14.1 0.0 1.7 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal 3D PF06725.11 gi|91772568|ref|YP_565260.1| - 0.14 12.4 0.0 0.68 10.2 0.0 2.1 3 0 0 3 3 3 0 3D domain MttA_Hcf106 PF02416.16 gi|91772569|ref|YP_565261.1| - 0.26 10.7 2.2 0.35 10.2 0.6 1.9 3 0 0 3 3 3 0 mttA/Hcf106 family CHU_C PF13585.6 gi|91772570|ref|YP_565262.1| - 0.029 14.4 0.1 0.054 13.6 0.1 1.4 1 1 0 1 1 1 0 C-terminal domain of CHU protein family TMEM238 PF15125.6 gi|91772570|ref|YP_565262.1| - 0.056 13.6 0.6 0.089 13.0 0.6 1.3 1 0 0 1 1 1 0 TMEM238 protein family DUF772 PF05598.11 gi|91772571|ref|YP_565263.1| - 0.011 15.8 0.0 0.035 14.1 0.0 1.9 1 1 0 1 1 1 0 Transposase domain (DUF772) DUF4283 PF14111.6 gi|91772571|ref|YP_565263.1| - 0.072 12.6 0.1 0.14 11.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) DUF1743 PF08489.11 gi|91772572|ref|YP_565264.1| - 1.5e-10 41.1 0.0 1.8e-06 28.0 0.0 3.5 2 1 0 2 2 2 2 Domain of unknown function (DUF1743) PgdA_N PF18627.1 gi|91772572|ref|YP_565264.1| - 0.1 12.2 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Peptidoglycan GlcNAc deacetylase N-terminal domain TPP_enzyme_C PF02775.21 gi|91772573|ref|YP_565265.1| - 3.3e-12 46.4 0.5 1.6e-11 44.2 0.3 2.3 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|91772573|ref|YP_565265.1| - 1.8e-09 37.7 1.1 2.2e-09 37.4 0.2 1.6 2 0 0 2 2 2 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPP_enzyme_N PF02776.18 gi|91772573|ref|YP_565265.1| - 3.7e-07 29.9 0.6 3.6e-06 26.7 0.2 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transket_pyr PF02779.24 gi|91772573|ref|YP_565265.1| - 0.004 16.8 0.0 0.011 15.4 0.0 1.7 1 1 0 1 1 1 1 Transketolase, pyrimidine binding domain DXP_synthase_N PF13292.6 gi|91772573|ref|YP_565265.1| - 0.017 14.4 0.1 0.032 13.4 0.1 1.4 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase PFOR_II PF17147.4 gi|91772573|ref|YP_565265.1| - 0.13 12.6 0.0 0.56 10.5 0.0 2.1 2 0 0 2 2 2 0 Pyruvate:ferredoxin oxidoreductase core domain II DDE_Tnp_IS66 PF03050.14 gi|91772574|ref|YP_565266.1| - 8.1e-54 183.0 1.1 2.2e-53 181.6 0.0 1.9 2 0 0 2 2 2 1 Transposase IS66 family SlyX PF04102.12 gi|91772574|ref|YP_565266.1| - 9.4e-05 23.0 0.6 0.00028 21.4 0.6 1.8 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91772574|ref|YP_565266.1| - 0.0003 21.0 0.0 0.22 11.7 0.2 2.6 2 0 0 2 2 2 2 DDE domain YkyA PF10368.9 gi|91772574|ref|YP_565266.1| - 0.044 13.4 1.5 0.43 10.2 0.7 2.3 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein BST2 PF16716.5 gi|91772574|ref|YP_565266.1| - 0.078 13.6 3.9 0.093 13.3 1.6 2.3 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 Gly_acyl_tr_N PF06021.11 gi|91772574|ref|YP_565266.1| - 0.086 12.9 1.0 0.16 12.1 0.2 1.8 2 0 0 2 2 2 0 Aralkyl acyl-CoA:amino acid N-acyltransferase BBS2_N PF14781.6 gi|91772574|ref|YP_565266.1| - 0.14 12.1 0.0 1.4 8.8 0.0 2.6 3 0 0 3 3 3 0 Ciliary BBSome complex subunit 2, N-terminal DUF16 PF01519.16 gi|91772574|ref|YP_565266.1| - 0.33 11.5 4.8 0.39 11.2 0.2 2.7 3 0 0 3 3 3 0 Protein of unknown function DUF16 PLATZ PF04640.14 gi|91772574|ref|YP_565266.1| - 0.38 11.4 4.0 0.91 10.2 1.9 2.5 2 1 0 2 2 2 0 PLATZ transcription factor DUF4177 PF13783.6 gi|91772575|ref|YP_565267.1| - 0.0098 16.2 0.0 0.013 15.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4177) P-II PF00543.22 gi|91772575|ref|YP_565267.1| - 0.11 13.2 0.0 0.11 13.1 0.0 1.1 1 0 0 1 1 1 0 Nitrogen regulatory protein P-II DUF2115 PF09888.9 gi|91772576|ref|YP_565268.1| - 8.4e-49 166.2 2.4 9.8e-49 166.0 2.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2115) DUF3179 PF11376.8 gi|91772577|ref|YP_565269.1| - 0.1 11.9 0.1 0.13 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3179) Thioredox_DsbH PF03190.15 gi|91772578|ref|YP_565270.1| - 4.4e-72 241.4 0.4 9.9e-72 240.2 0.4 1.6 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|91772578|ref|YP_565270.1| - 1.5e-11 44.3 0.0 3.6e-11 43.1 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin-like Glyco_hydro_88 PF07470.13 gi|91772578|ref|YP_565270.1| - 1.2e-09 37.8 0.1 5.4e-05 22.4 0.0 2.6 2 1 0 2 2 2 2 Glycosyl Hydrolase Family 88 Glyco_hydro_76 PF03663.14 gi|91772578|ref|YP_565270.1| - 6.8e-07 29.1 0.3 0.0066 16.0 0.0 2.7 2 1 0 2 2 2 2 Glycosyl hydrolase family 76 GlcNAc_2-epim PF07221.11 gi|91772578|ref|YP_565270.1| - 1e-05 25.0 0.6 0.045 13.0 0.0 3.7 4 0 0 4 4 4 2 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) LANC_like PF05147.13 gi|91772578|ref|YP_565270.1| - 2.5e-05 23.0 3.7 0.0094 14.6 0.0 4.3 3 2 0 3 3 3 1 Lanthionine synthetase C-like protein Thioredoxin_2 PF13098.6 gi|91772578|ref|YP_565270.1| - 0.0044 17.5 0.0 0.39 11.2 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin-like domain C5-epim_C PF06662.13 gi|91772578|ref|YP_565270.1| - 0.0046 16.5 2.4 0.031 13.8 0.1 3.1 2 2 1 4 4 4 1 D-glucuronyl C5-epimerase C-terminus Pox_G9-A16 PF03003.16 gi|91772578|ref|YP_565270.1| - 0.094 12.4 0.1 0.21 11.3 0.1 1.5 1 0 0 1 1 1 0 Pox virus entry-fusion-complex G9/A16 RNHCP PF12647.7 gi|91772579|ref|YP_565271.1| - 0.00079 19.3 0.2 0.0013 18.7 0.2 1.3 1 0 0 1 1 1 1 RNHCP domain DUF678 PF05077.12 gi|91772579|ref|YP_565271.1| - 0.062 13.4 0.6 0.19 11.9 0.8 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF678) DUF2551 PF10826.8 gi|91772580|ref|YP_565272.1| - 7.1e-34 115.9 0.7 8.8e-34 115.6 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) Penicillinase_R PF03965.16 gi|91772580|ref|YP_565272.1| - 0.0036 17.6 0.1 0.0052 17.1 0.1 1.3 1 0 0 1 1 1 1 Penicillinase repressor DUF4777 PF16007.5 gi|91772580|ref|YP_565272.1| - 0.085 13.1 0.0 0.16 12.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) TrmB PF01978.19 gi|91772581|ref|YP_565273.1| - 0.11 12.4 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB TrkA_N PF02254.18 gi|91772582|ref|YP_565274.1| - 7.2e-26 90.7 2.5 1.3e-25 89.9 2.5 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|91772582|ref|YP_565274.1| - 1.9e-09 37.2 0.0 6.1e-09 35.6 0.0 1.9 1 0 0 1 1 1 1 TrkA-C domain NAD_binding_7 PF13241.6 gi|91772582|ref|YP_565274.1| - 2.7e-07 31.0 0.7 5e-07 30.1 0.7 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding F420_oxidored PF03807.17 gi|91772582|ref|YP_565274.1| - 7.7e-05 23.2 1.3 0.00018 22.0 1.3 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.6 gi|91772582|ref|YP_565274.1| - 9.6e-05 22.3 0.0 0.00012 22.0 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Shikimate_DH PF01488.20 gi|91772582|ref|YP_565274.1| - 0.00025 21.1 2.5 0.00041 20.4 1.1 1.9 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_2 PF03446.15 gi|91772582|ref|YP_565274.1| - 0.0021 18.3 0.3 0.0029 17.8 0.3 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|91772582|ref|YP_565274.1| - 0.0023 17.9 0.2 0.0036 17.2 0.2 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HI0933_like PF03486.14 gi|91772582|ref|YP_565274.1| - 0.004 15.9 0.1 0.0051 15.6 0.1 1.2 1 0 0 1 1 1 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|91772582|ref|YP_565274.1| - 0.011 15.0 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain Pyr_redox_2 PF07992.14 gi|91772582|ref|YP_565274.1| - 0.023 14.0 0.3 0.03 13.6 0.3 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|91772582|ref|YP_565274.1| - 0.025 15.1 0.4 0.053 14.1 0.4 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|91772582|ref|YP_565274.1| - 0.029 13.9 0.1 0.045 13.3 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Epimerase PF01370.21 gi|91772582|ref|YP_565274.1| - 0.033 13.7 0.1 0.042 13.3 0.1 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family LpxI_N PF17930.1 gi|91772582|ref|YP_565274.1| - 0.042 13.7 0.1 0.074 12.9 0.1 1.5 1 1 0 1 1 1 0 LpxI N-terminal domain DAO PF01266.24 gi|91772582|ref|YP_565274.1| - 0.044 13.3 0.3 0.074 12.6 0.2 1.3 1 1 0 1 1 1 0 FAD dependent oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|91772582|ref|YP_565274.1| - 0.045 13.7 0.0 0.075 13.0 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus adh_short PF00106.25 gi|91772582|ref|YP_565274.1| - 0.06 12.8 0.4 0.083 12.3 0.4 1.2 1 0 0 1 1 1 0 short chain dehydrogenase KR PF08659.10 gi|91772582|ref|YP_565274.1| - 0.078 12.9 0.3 0.11 12.4 0.3 1.3 1 0 0 1 1 1 0 KR domain ApbA PF02558.16 gi|91772582|ref|YP_565274.1| - 0.12 12.0 0.2 0.19 11.3 0.2 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA TrkH PF02386.16 gi|91772583|ref|YP_565275.1| - 3.7e-46 157.6 25.8 2.1e-44 151.9 25.8 2.1 1 1 0 1 1 1 1 Cation transport protein Spo7 PF03907.13 gi|91772583|ref|YP_565275.1| - 7.7 5.9 5.8 28 4.1 0.9 2.5 2 0 0 2 2 2 0 Spo7-like protein FlpD PF02662.16 gi|91772585|ref|YP_565277.1| - 7.3e-56 187.5 5.3 1.7e-52 176.6 0.1 4.1 4 0 0 4 4 4 2 Methyl-viologen-reducing hydrogenase, delta subunit Pyr_redox_2 PF07992.14 gi|91772585|ref|YP_565277.1| - 9.2e-19 67.8 0.1 2.5e-18 66.3 0.1 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_7 PF12838.7 gi|91772585|ref|YP_565277.1| - 3e-14 53.3 30.5 8.6e-06 26.3 12.5 5.1 4 2 0 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772585|ref|YP_565277.1| - 3.4e-11 43.9 28.1 0.00039 21.3 2.1 5.5 6 0 0 6 6 4 3 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|91772585|ref|YP_565277.1| - 2.4e-10 39.8 54.7 2.3e-07 30.3 3.5 5.8 6 1 0 6 6 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91772585|ref|YP_565277.1| - 8.2e-09 35.5 50.6 3.1e-05 24.0 16.9 5.8 7 0 0 7 7 5 3 4Fe-4S dicluster domain FAD_oxidored PF12831.7 gi|91772585|ref|YP_565277.1| - 2.1e-08 34.0 0.3 3.5e-08 33.2 0.3 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer4_6 PF12837.7 gi|91772585|ref|YP_565277.1| - 3.7e-08 33.1 50.9 0.00018 21.4 2.8 5.6 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91772585|ref|YP_565277.1| - 4.2e-08 33.2 40.1 3.5e-05 23.8 0.1 5.2 5 1 1 6 6 5 4 4Fe-4S dicluster domain FAD_binding_2 PF00890.24 gi|91772585|ref|YP_565277.1| - 6.8e-08 32.0 0.8 3.6e-07 29.6 0.8 2.0 2 0 0 2 2 2 1 FAD binding domain Fer4_9 PF13187.6 gi|91772585|ref|YP_565277.1| - 8.9e-08 32.2 27.0 1.7e-05 24.9 12.2 4.4 3 2 1 4 4 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772585|ref|YP_565277.1| - 2.3e-06 27.7 33.7 0.024 15.1 1.4 5.4 4 0 0 4 4 4 3 4Fe-4S binding domain GIDA PF01134.22 gi|91772585|ref|YP_565277.1| - 3e-06 26.6 0.2 6.5e-06 25.5 0.2 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|91772585|ref|YP_565277.1| - 7.5e-06 26.4 0.4 3e-05 24.5 0.4 2.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|91772585|ref|YP_565277.1| - 1.2e-05 24.7 0.3 0.00015 21.1 0.0 2.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|91772585|ref|YP_565277.1| - 2.2e-05 23.3 0.6 4.6e-05 22.3 0.6 1.5 1 0 0 1 1 1 1 HI0933-like protein DAO PF01266.24 gi|91772585|ref|YP_565277.1| - 4.4e-05 23.2 0.5 0.00095 18.8 0.9 2.5 2 0 0 2 2 2 1 FAD dependent oxidoreductase Fer4_17 PF13534.6 gi|91772585|ref|YP_565277.1| - 7.9e-05 23.1 31.8 0.00035 21.0 3.8 4.7 4 1 0 4 4 3 3 4Fe-4S dicluster domain NAD_binding_8 PF13450.6 gi|91772585|ref|YP_565277.1| - 8.8e-05 22.7 0.0 0.0002 21.5 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Fer4_8 PF13183.6 gi|91772585|ref|YP_565277.1| - 9.8e-05 22.7 37.0 0.18 12.3 3.9 5.8 3 2 1 4 4 4 2 4Fe-4S dicluster domain AlaDh_PNT_C PF01262.21 gi|91772585|ref|YP_565277.1| - 0.00042 19.7 0.0 0.00084 18.7 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Fer4_2 PF12797.7 gi|91772585|ref|YP_565277.1| - 0.00057 19.8 48.1 0.0014 18.6 2.3 5.9 6 0 0 6 6 5 3 4Fe-4S binding domain Thi4 PF01946.17 gi|91772585|ref|YP_565277.1| - 0.00082 18.7 0.0 0.0024 17.2 0.0 1.8 1 0 0 1 1 1 1 Thi4 family NAD_binding_7 PF13241.6 gi|91772585|ref|YP_565277.1| - 0.00094 19.6 0.7 0.094 13.2 0.0 3.6 3 0 0 3 3 3 1 Putative NAD(P)-binding FAD_binding_3 PF01494.19 gi|91772585|ref|YP_565277.1| - 0.0011 18.3 1.3 0.0016 17.8 0.5 1.6 2 0 0 2 2 1 1 FAD binding domain K_oxygenase PF13434.6 gi|91772585|ref|YP_565277.1| - 0.0019 17.4 0.2 2.9 6.9 0.0 3.1 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 gi|91772585|ref|YP_565277.1| - 0.048 12.7 0.4 0.085 11.9 0.4 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein HTH_53 PF18606.1 gi|91772585|ref|YP_565277.1| - 0.048 13.3 0.0 30 4.4 0.0 3.4 3 0 0 3 3 3 0 Zap helix turn helix N-terminal domain Fer4_22 PF17179.4 gi|91772585|ref|YP_565277.1| - 0.08 13.8 0.3 0.08 13.8 0.3 4.9 4 1 1 5 5 4 0 4Fe-4S dicluster domain Trp_halogenase PF04820.14 gi|91772585|ref|YP_565277.1| - 0.11 11.3 0.5 1.1 8.1 0.4 2.0 2 0 0 2 2 2 0 Tryptophan halogenase NAD_binding_9 PF13454.6 gi|91772585|ref|YP_565277.1| - 0.15 12.0 0.6 13 5.7 0.2 2.7 3 0 0 3 3 2 0 FAD-NAD(P)-binding Fer4 PF00037.27 gi|91772586|ref|YP_565278.1| - 1.9e-39 131.9 75.3 9.4e-08 31.6 2.1 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91772586|ref|YP_565278.1| - 7.6e-31 106.5 62.5 1.5e-10 41.5 8.1 4.9 2 1 4 6 6 6 6 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91772586|ref|YP_565278.1| - 1e-25 89.6 57.1 8e-07 29.1 8.7 5.5 2 2 5 7 7 7 7 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91772586|ref|YP_565278.1| - 1.5e-25 88.1 76.8 5.9e-06 26.1 2.2 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91772586|ref|YP_565278.1| - 2.1e-23 82.2 66.2 5.1e-06 26.5 10.4 6.4 4 3 3 7 7 7 7 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772586|ref|YP_565278.1| - 5.6e-23 80.8 59.1 1.5e-05 25.1 12.3 6.5 4 1 3 7 7 7 7 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772586|ref|YP_565278.1| - 5.7e-22 78.4 59.4 0.00076 20.4 8.9 7.5 5 1 2 7 7 7 6 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|91772586|ref|YP_565278.1| - 6.2e-16 57.4 75.5 0.00016 21.6 2.3 8.3 8 0 0 8 8 8 6 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91772586|ref|YP_565278.1| - 6e-12 45.8 64.8 0.00049 20.5 8.0 6.1 4 4 2 6 6 6 4 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772586|ref|YP_565278.1| - 1e-10 41.2 73.2 0.0011 19.3 3.8 8.3 8 0 0 8 8 8 5 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91772586|ref|YP_565278.1| - 3.6e-09 37.0 66.2 0.018 15.5 11.3 7.5 2 2 5 7 7 7 5 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91772586|ref|YP_565278.1| - 2.4e-07 31.2 88.6 0.065 14.2 5.3 8.3 8 0 0 8 8 8 6 4Fe-4S binding domain Fer4_15 PF13459.6 gi|91772586|ref|YP_565278.1| - 0.00016 22.4 63.3 0.04 14.6 1.2 9.0 8 1 0 8 8 8 5 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|91772586|ref|YP_565278.1| - 0.00016 22.2 73.3 0.72 10.4 1.5 8.4 7 1 1 8 8 8 5 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|91772586|ref|YP_565278.1| - 0.019 15.8 0.2 0.019 15.8 0.2 8.1 7 1 2 9 9 8 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91772586|ref|YP_565278.1| - 0.093 12.9 55.8 0.17 12.1 5.8 7.3 2 1 5 7 7 6 0 4Fe-4S dicluster domain Actin_micro PF17003.5 gi|91772587|ref|YP_565279.1| - 0.0035 16.6 1.7 0.0039 16.4 1.7 1.0 1 0 0 1 1 1 1 Putative actin-like family Ribosomal_L27e PF01777.18 gi|91772587|ref|YP_565279.1| - 0.11 12.9 2.7 0.15 12.4 1.2 1.8 2 0 0 2 2 2 0 Ribosomal L27e protein family ABC2_membrane_3 PF12698.7 gi|91772588|ref|YP_565280.1| - 0.0069 15.5 1.6 0.0088 15.2 1.6 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein DUF2023 PF09633.10 gi|91772588|ref|YP_565280.1| - 0.017 15.2 0.1 5.3 7.2 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2023) PsbI PF02532.14 gi|91772588|ref|YP_565280.1| - 0.18 11.8 0.0 0.3 11.0 0.0 1.4 1 0 0 1 1 1 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) tRNA_anti-like PF12869.7 gi|91772589|ref|YP_565281.1| - 0.0059 16.2 0.1 0.012 15.3 0.0 1.5 1 1 0 1 1 1 1 tRNA_anti-like RapA_C PF12137.8 gi|91772589|ref|YP_565281.1| - 0.0069 15.5 3.5 0.01 14.9 3.5 1.1 1 0 0 1 1 1 1 RNA polymerase recycling family C-terminal Serinc PF03348.15 gi|91772589|ref|YP_565281.1| - 0.043 12.7 0.1 0.048 12.6 0.1 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) DUF3736 PF12540.8 gi|91772589|ref|YP_565281.1| - 0.059 13.5 0.1 2.1 8.5 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3736) DUF874 PF05917.11 gi|91772589|ref|YP_565281.1| - 0.065 12.3 2.1 0.088 11.8 2.1 1.2 1 0 0 1 1 1 0 Helicobacter pylori protein of unknown function (DUF874) Resolvase PF00239.21 gi|91772590|ref|YP_565282.1| - 1e-23 84.1 0.0 1.2e-23 83.9 0.0 1.0 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_23 PF13384.6 gi|91772591|ref|YP_565283.1| - 3.4e-06 26.7 0.2 6.6e-06 25.8 0.2 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 gi|91772591|ref|YP_565283.1| - 0.00043 20.4 0.1 0.00081 19.5 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|91772591|ref|YP_565283.1| - 0.0037 16.9 0.0 0.0054 16.4 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|91772591|ref|YP_565283.1| - 0.0056 16.7 0.1 0.0099 15.9 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix GerE PF00196.19 gi|91772591|ref|YP_565283.1| - 0.012 15.1 0.0 0.021 14.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Sigma70_r4 PF04545.16 gi|91772591|ref|YP_565283.1| - 0.021 14.3 0.1 0.13 11.8 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_7 PF02796.15 gi|91772591|ref|YP_565283.1| - 0.048 13.8 0.0 0.093 12.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Ribosomal_S13_N PF08069.12 gi|91772591|ref|YP_565283.1| - 0.048 13.7 0.1 0.069 13.2 0.1 1.3 1 0 0 1 1 1 0 Ribosomal S13/S15 N-terminal domain HTH_38 PF13936.6 gi|91772591|ref|YP_565283.1| - 0.059 13.2 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Resolvase PF00239.21 gi|91772591|ref|YP_565283.1| - 0.065 13.3 0.1 0.11 12.6 0.1 1.4 1 0 0 1 1 1 0 Resolvase, N terminal domain RadC PF04002.15 gi|91772592|ref|YP_565284.1| - 6.1e-05 23.0 0.0 0.00017 21.5 0.0 1.7 2 0 0 2 2 2 1 RadC-like JAB domain Prok-JAB PF14464.6 gi|91772592|ref|YP_565284.1| - 0.12 12.1 0.0 0.38 10.5 0.0 1.7 1 1 0 1 1 1 0 Prokaryotic homologs of the JAB domain Cas_Cas1 PF01867.16 gi|91772593|ref|YP_565285.1| - 2.7e-77 259.7 0.0 3.1e-77 259.5 0.0 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 ER PF01133.17 gi|91772593|ref|YP_565285.1| - 0.11 12.5 0.2 0.46 10.5 0.0 2.1 2 0 0 2 2 2 0 Enhancer of rudimentary DUF1844 PF08899.11 gi|91772594|ref|YP_565286.1| - 0.06 13.6 1.1 0.43 10.9 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF1844) HEAT_2 PF13646.6 gi|91772594|ref|YP_565286.1| - 0.071 13.5 0.0 1.7 9.0 0.0 2.8 2 1 1 3 3 3 0 HEAT repeats GCHY-1 PF02649.14 gi|91772595|ref|YP_565287.1| - 0.03 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 HNH PF01844.23 gi|91772596|ref|YP_565288.1| - 0.0012 19.0 5.3 0.091 13.0 4.8 3.0 2 1 0 2 2 2 1 HNH endonuclease PRELI PF04707.14 gi|91772596|ref|YP_565288.1| - 0.017 14.9 0.2 0.035 13.9 0.1 1.5 1 1 0 1 1 1 0 PRELI-like family DZR PF12773.7 gi|91772596|ref|YP_565288.1| - 0.034 14.2 1.2 0.065 13.3 1.2 1.5 1 1 0 1 1 1 0 Double zinc ribbon RecA_dep_nuc PF16786.5 gi|91772596|ref|YP_565288.1| - 0.07 13.3 0.2 0.089 12.9 0.2 1.2 1 0 0 1 1 1 0 Recombination enhancement, RecA-dependent nuclease zf-HYPF PF07503.12 gi|91772596|ref|YP_565288.1| - 0.29 10.9 1.5 5.6 6.8 0.2 2.2 2 0 0 2 2 2 0 HypF finger zinc_ribbon_2 PF13240.6 gi|91772596|ref|YP_565288.1| - 0.39 10.5 4.0 5.1 7.0 0.5 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DNA_pol_B_2 PF03175.13 gi|91772597|ref|YP_565289.1| - 2.3e-10 40.0 1.5 5.2e-10 38.8 1.5 1.6 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral DNA_pol_B PF00136.21 gi|91772597|ref|YP_565289.1| - 2.9e-07 29.6 2.5 0.01 14.6 0.7 3.0 3 0 0 3 3 3 2 DNA polymerase family B DNApol_Exo PF18136.1 gi|91772597|ref|YP_565289.1| - 0.021 13.9 0.2 0.66 9.1 0.1 2.5 2 1 0 2 2 2 0 DNA mitochondrial polymerase exonuclease domain PIN_12 PF16289.5 gi|91772598|ref|YP_565290.1| - 9e-34 117.4 14.9 9e-34 117.4 14.9 2.3 2 1 0 2 2 2 1 PIN domain PIN_8 PF18476.1 gi|91772598|ref|YP_565290.1| - 3.1e-19 69.7 14.0 1.1e-18 67.9 10.5 2.8 2 1 0 2 2 2 1 PIN like domain PIN PF01850.21 gi|91772598|ref|YP_565290.1| - 0.0057 17.2 0.4 0.013 16.0 0.1 1.9 2 0 0 2 2 2 1 PIN domain PIN_3 PF13470.6 gi|91772598|ref|YP_565290.1| - 0.048 14.4 0.1 0.1 13.4 0.1 1.6 1 0 0 1 1 1 0 PIN domain AAA_6 PF12774.7 gi|91772598|ref|YP_565290.1| - 0.26 10.2 2.2 0.41 9.6 2.2 1.2 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Type2_restr_D3 PF16902.5 gi|91772598|ref|YP_565290.1| - 1 9.4 6.0 1.2 9.1 0.8 2.9 3 0 0 3 3 3 0 Type-2 restriction enzyme D3 domain DUF772 PF05598.11 gi|91772599|ref|YP_565291.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91772599|ref|YP_565291.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91772599|ref|YP_565291.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91772599|ref|YP_565291.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91772599|ref|YP_565291.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease DUF772 PF05598.11 gi|91772600|ref|YP_565292.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91772600|ref|YP_565292.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91772600|ref|YP_565292.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91772600|ref|YP_565292.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91772600|ref|YP_565292.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease DNA_pol_B_2 PF03175.13 gi|91772601|ref|YP_565293.1| - 1.3e-14 53.9 6.0 1.3e-14 53.9 6.0 1.6 2 0 0 2 2 2 1 DNA polymerase type B, organellar and viral DNA_pol_B PF00136.21 gi|91772601|ref|YP_565293.1| - 8.5e-07 28.0 0.6 0.012 14.4 0.1 3.1 3 0 0 3 3 3 2 DNA polymerase family B DNApol_Exo PF18136.1 gi|91772601|ref|YP_565293.1| - 0.0013 17.9 0.4 0.027 13.6 0.3 2.4 2 1 0 2 2 2 1 DNA mitochondrial polymerase exonuclease domain DUF3268 PF11672.8 gi|91772602|ref|YP_565294.1| - 0.0058 17.0 0.1 0.008 16.5 0.1 1.2 1 0 0 1 1 1 1 zinc-finger-containing domain HNH PF01844.23 gi|91772602|ref|YP_565294.1| - 0.0058 16.8 5.6 0.032 14.4 5.6 2.0 1 1 0 1 1 1 1 HNH endonuclease zf-C4pol PF14260.6 gi|91772602|ref|YP_565294.1| - 0.024 15.1 0.9 0.037 14.5 0.9 1.3 1 0 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta DZR PF12773.7 gi|91772602|ref|YP_565294.1| - 0.089 12.8 1.8 0.22 11.6 1.8 1.6 1 1 0 1 1 1 0 Double zinc ribbon Cytochrome_C7 PF14522.6 gi|91772602|ref|YP_565294.1| - 0.1 12.6 3.7 0.11 12.5 0.7 1.9 1 1 1 2 2 2 0 Cytochrome c7 and related cytochrome c Elf1 PF05129.13 gi|91772602|ref|YP_565294.1| - 0.17 11.9 2.4 0.63 10.1 2.4 1.9 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zf-HYPF PF07503.12 gi|91772602|ref|YP_565294.1| - 0.39 10.5 2.0 5.5 6.8 0.3 2.3 2 0 0 2 2 2 0 HypF finger HTH_DeoR PF08220.12 gi|91772604|ref|YP_565296.1| - 0.039 13.7 0.1 4.4 7.1 0.1 3.2 2 1 1 3 3 3 0 DeoR-like helix-turn-helix domain Mrr_N PF14338.6 gi|91772604|ref|YP_565296.1| - 0.11 12.6 1.1 2.3 8.4 0.2 3.1 2 1 0 2 2 2 0 Mrr N-terminal domain Cas_Cas1 PF01867.16 gi|91772605|ref|YP_565297.1| - 3.1e-78 262.8 0.1 4e-78 262.4 0.1 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 ER PF01133.17 gi|91772605|ref|YP_565297.1| - 0.083 12.9 0.0 0.24 11.4 0.0 1.8 1 0 0 1 1 1 0 Enhancer of rudimentary DUF4263 PF14082.6 gi|91772607|ref|YP_565299.1| - 9.4e-19 68.2 2.8 1.1e-18 67.9 2.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4263) Pallilysin PF18663.1 gi|91772607|ref|YP_565299.1| - 0.025 14.6 0.1 0.036 14.1 0.1 1.3 1 0 0 1 1 1 0 Pallilysin beta barrel domain HEPN_Apea PF18739.1 gi|91772608|ref|YP_565300.1| - 3.7e-14 53.0 0.6 3.7e-14 53.0 0.6 2.6 2 0 0 2 2 2 1 Apea-like HEPN DNA_pol_B_2 PF03175.13 gi|91772609|ref|YP_565301.1| - 5.7e-11 42.0 7.0 5.7e-11 42.0 7.0 1.6 2 0 0 2 2 2 1 DNA polymerase type B, organellar and viral DNA_pol_B PF00136.21 gi|91772609|ref|YP_565301.1| - 7.7e-09 34.8 1.5 0.0028 16.4 0.3 3.0 3 0 0 3 3 3 2 DNA polymerase family B DNApol_Exo PF18136.1 gi|91772609|ref|YP_565301.1| - 0.076 12.1 0.1 0.82 8.8 0.1 2.2 2 0 0 2 2 2 0 DNA mitochondrial polymerase exonuclease domain zf-RVT PF13966.6 gi|91772611|ref|YP_565303.1| - 0.16 12.7 1.9 0.66 10.7 1.9 1.8 1 1 0 1 1 1 0 zinc-binding in reverse transcriptase NS3 PF17530.2 gi|91772612|ref|YP_565304.1| - 0.017 14.7 0.1 0.022 14.4 0.1 1.3 1 1 0 1 1 1 0 Non-structural protein NS3 Cas_Cas1 PF01867.16 gi|91772613|ref|YP_565305.1| - 1.2e-76 257.6 0.0 1.6e-76 257.2 0.0 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 ER PF01133.17 gi|91772613|ref|YP_565305.1| - 0.057 13.5 0.1 0.22 11.5 0.0 2.0 2 0 0 2 2 2 0 Enhancer of rudimentary Fer4_16 PF13484.6 gi|91772614|ref|YP_565306.1| - 6.4e-07 30.2 3.0 1.1e-06 29.5 3.0 1.4 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|91772614|ref|YP_565306.1| - 0.012 16.2 4.5 0.045 14.3 4.6 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91772614|ref|YP_565306.1| - 0.12 12.5 10.2 0.12 12.5 0.8 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91772614|ref|YP_565306.1| - 0.13 12.4 5.4 6.1 7.1 5.6 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772614|ref|YP_565306.1| - 0.32 11.1 6.1 19 5.5 0.4 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772614|ref|YP_565306.1| - 0.38 10.9 5.7 10 6.3 0.5 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91772614|ref|YP_565306.1| - 0.42 11.6 9.2 1.9 9.6 2.8 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|91772614|ref|YP_565306.1| - 0.5 10.3 0.1 0.5 10.3 0.1 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain DUF772 PF05598.11 gi|91772615|ref|YP_565307.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91772615|ref|YP_565307.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91772615|ref|YP_565307.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91772615|ref|YP_565307.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91772615|ref|YP_565307.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease DUF772 PF05598.11 gi|91772616|ref|YP_565308.1| - 0.01 15.8 0.0 0.044 13.8 0.0 2.1 2 1 0 2 2 2 0 Transposase domain (DUF772) DUF4283 PF14111.6 gi|91772616|ref|YP_565308.1| - 0.066 12.7 0.1 0.14 11.7 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) Putative_PNPOx PF01243.20 gi|91772617|ref|YP_565309.1| - 2e-13 50.3 0.0 2.4e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Cdd1 PF11731.8 gi|91772618|ref|YP_565310.1| - 8.3e-24 83.6 0.1 9.6e-24 83.4 0.1 1.0 1 0 0 1 1 1 1 Pathogenicity locus IMS_HHH PF11798.8 gi|91772618|ref|YP_565310.1| - 0.0069 16.6 0.0 0.014 15.7 0.0 1.5 1 0 0 1 1 1 1 IMS family HHH motif TfoX_C PF04994.13 gi|91772618|ref|YP_565310.1| - 0.028 14.5 0.0 0.037 14.1 0.0 1.2 1 0 0 1 1 1 0 TfoX C-terminal domain Adenine_glyco PF03352.13 gi|91772619|ref|YP_565311.1| - 1.5e-81 272.4 0.0 1.7e-81 272.2 0.0 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase DNA_alkylation PF08713.11 gi|91772620|ref|YP_565312.1| - 7.8e-05 22.5 0.0 8.1e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 DNA alkylation repair enzyme DUF429 PF04250.13 gi|91772621|ref|YP_565313.1| - 8.2e-50 169.5 0.0 9.8e-50 169.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF429) HD_6 PF18019.1 gi|91772622|ref|YP_565314.1| - 6.3e-45 153.7 0.5 9.2e-45 153.2 0.5 1.3 1 0 0 1 1 1 1 HD domain ResIII PF04851.15 gi|91772622|ref|YP_565314.1| - 1.5e-05 25.0 0.0 4.5e-05 23.5 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|91772622|ref|YP_565314.1| - 0.00043 20.6 0.0 0.0082 16.5 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|91772622|ref|YP_565314.1| - 0.00048 19.9 0.1 0.012 15.3 0.1 2.2 1 1 0 1 1 1 1 DEAD/DEAH box helicase CRISPR_Cse1 PF09481.10 gi|91772623|ref|YP_565315.1| - 6e-103 345.4 0.0 6.9e-103 345.2 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Cse1 (CRISPR_cse1) CRISPR_Cse2 PF09485.10 gi|91772624|ref|YP_565316.1| - 4.8e-17 62.8 0.0 6.1e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated protein Cse2 (CRISPR_cse2) Cas_CT1975 PF09344.10 gi|91772625|ref|YP_565317.1| - 1.7e-98 330.5 0.8 3.3e-98 329.5 0.8 1.4 1 1 0 1 1 1 1 CT1975-like protein Cas_Cas7 PF05107.12 gi|91772625|ref|YP_565317.1| - 0.00037 20.1 0.0 0.00069 19.3 0.0 1.5 1 1 0 1 1 1 1 CRISPR-associated protein Cas7 U3snoRNP10 PF12397.8 gi|91772625|ref|YP_565317.1| - 0.01 16.2 0.0 0.083 13.2 0.0 2.3 2 0 0 2 2 2 0 U3 small nucleolar RNA-associated protein 10 Cas_Cas5d PF09704.10 gi|91772626|ref|YP_565318.1| - 1.5e-52 178.6 0.0 1.7e-52 178.4 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) CRISPR_assoc PF08798.11 gi|91772627|ref|YP_565319.1| - 1.8e-47 162.4 0.0 1.9e-47 162.2 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas_Cas1 PF01867.16 gi|91772628|ref|YP_565320.1| - 4e-14 52.4 0.0 9.9e-08 31.4 0.0 2.1 1 1 1 2 2 2 2 CRISPR associated protein Cas1 Cas_Cas2CT1978 PF09707.10 gi|91772629|ref|YP_565321.1| - 4e-33 113.3 0.1 4.5e-33 113.2 0.1 1.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas2CT1978) DUF805 PF05656.14 gi|91772630|ref|YP_565322.1| - 0.26 11.7 11.9 16 6.0 11.9 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF805) DPM3 PF08285.11 gi|91772630|ref|YP_565322.1| - 3.9 7.7 12.4 4.4 7.6 3.1 2.7 1 1 2 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF4328 PF14219.6 gi|91772630|ref|YP_565322.1| - 9 5.8 10.2 2.5 7.6 0.4 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4328) AMP-binding PF00501.28 gi|91772631|ref|YP_565323.1| - 7.4e-16 57.8 0.0 1.1e-15 57.2 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme SIS_2 PF13580.6 gi|91772631|ref|YP_565323.1| - 0.13 12.2 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 SIS domain ABC1 PF03109.16 gi|91772632|ref|YP_565324.1| - 1.4e-27 96.2 0.0 4.3e-27 94.6 0.0 1.9 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.22 gi|91772632|ref|YP_565324.1| - 6e-08 32.5 0.2 3e-07 30.2 0.1 2.0 2 0 0 2 2 2 1 RIO1 family WaaY PF06176.11 gi|91772632|ref|YP_565324.1| - 5.7e-06 26.1 0.6 5.7e-06 26.1 0.6 2.4 3 0 0 3 3 3 1 Lipopolysaccharide core biosynthesis protein (WaaY) APH PF01636.23 gi|91772632|ref|YP_565324.1| - 4.6e-05 23.5 0.0 0.0014 18.6 0.2 2.2 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pkinase PF00069.25 gi|91772632|ref|YP_565324.1| - 0.00024 20.6 1.4 0.00088 18.7 0.6 2.0 2 0 0 2 2 2 1 Protein kinase domain TRAM PF01938.20 gi|91772633|ref|YP_565325.1| - 2.8e-17 62.4 0.7 3.2e-17 62.3 0.7 1.0 1 0 0 1 1 1 1 TRAM domain POR PF01558.18 gi|91772634|ref|YP_565326.1| - 1.7e-38 132.5 0.0 2.8e-38 131.7 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|91772634|ref|YP_565326.1| - 4.1e-22 78.6 0.1 6.2e-22 78.0 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TGBp3 PF02495.17 gi|91772634|ref|YP_565326.1| - 0.26 11.0 0.5 0.5 10.1 0.5 1.4 1 0 0 1 1 1 0 Triple gene block 3 POR_N PF01855.19 gi|91772635|ref|YP_565327.1| - 1.2e-53 182.2 0.0 1.6e-53 181.8 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|91772635|ref|YP_565327.1| - 1.2e-25 89.8 0.0 2.5e-25 88.7 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|91772635|ref|YP_565327.1| - 0.0011 18.9 0.0 0.0024 17.7 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain DUF1968 PF09291.10 gi|91772635|ref|YP_565327.1| - 0.15 12.2 0.1 0.28 11.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1968) Fer4_7 PF12838.7 gi|91772636|ref|YP_565328.1| - 2.5e-11 44.0 9.6 2.9e-11 43.8 9.6 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772636|ref|YP_565328.1| - 6.6e-09 35.7 20.6 1.3e-06 28.4 10.9 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91772636|ref|YP_565328.1| - 4.3e-08 33.2 8.7 6.7e-08 32.6 8.7 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91772636|ref|YP_565328.1| - 8.5e-08 31.7 13.2 0.00021 21.0 1.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91772636|ref|YP_565328.1| - 1.5e-07 31.4 8.2 4.8e-07 29.8 8.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772636|ref|YP_565328.1| - 6.5e-07 29.1 12.8 0.00062 19.7 2.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|91772636|ref|YP_565328.1| - 2.2e-06 28.4 6.3 0.015 16.1 1.0 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91772636|ref|YP_565328.1| - 4.8e-06 26.4 14.0 0.0014 18.6 2.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|91772636|ref|YP_565328.1| - 4e-05 24.1 6.0 0.003 18.1 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 gi|91772636|ref|YP_565328.1| - 5.3e-05 24.1 13.7 0.0049 17.8 2.4 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|91772636|ref|YP_565328.1| - 5.4e-05 23.6 12.9 0.0016 18.9 12.9 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91772636|ref|YP_565328.1| - 0.00062 20.5 16.0 0.12 13.4 3.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|91772636|ref|YP_565328.1| - 0.00065 20.0 18.2 0.0085 16.5 4.2 2.2 1 1 1 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|91772636|ref|YP_565328.1| - 0.00098 19.8 7.5 0.13 13.0 1.0 2.1 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|91772636|ref|YP_565328.1| - 0.0019 18.6 13.2 0.024 15.1 13.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91772636|ref|YP_565328.1| - 0.041 14.1 6.6 1.3 9.3 1.0 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain AMP-binding PF00501.28 gi|91772637|ref|YP_565329.1| - 2.1e-74 250.6 0.0 5.3e-74 249.3 0.0 1.6 2 0 0 2 2 2 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|91772637|ref|YP_565329.1| - 8.5e-18 65.1 0.8 1.7e-17 64.2 0.8 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Cupin_2 PF07883.11 gi|91772638|ref|YP_565330.1| - 1.2e-16 60.1 0.0 1.8e-16 59.6 0.0 1.3 1 0 0 1 1 1 1 Cupin domain HTH_19 PF12844.7 gi|91772638|ref|YP_565330.1| - 6.3e-06 26.1 0.0 1.9e-05 24.6 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|91772638|ref|YP_565330.1| - 8.6e-06 25.7 0.0 1.3e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix MannoseP_isomer PF01050.18 gi|91772638|ref|YP_565330.1| - 0.00024 21.0 0.0 0.00033 20.6 0.0 1.2 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 gi|91772638|ref|YP_565330.1| - 0.0023 17.8 0.0 0.0038 17.1 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_31 PF13560.6 gi|91772638|ref|YP_565330.1| - 0.0031 17.8 0.0 0.0046 17.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_3 PF05899.12 gi|91772638|ref|YP_565330.1| - 0.026 14.2 0.0 0.042 13.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) EutQ PF06249.12 gi|91772638|ref|YP_565330.1| - 0.067 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ Cupin_1 PF00190.22 gi|91772638|ref|YP_565330.1| - 0.075 12.6 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Cupin NPCBM_assoc PF10633.9 gi|91772639|ref|YP_565331.1| - 5.3e-08 33.0 0.7 0.035 14.3 0.1 4.0 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF916 PF06030.12 gi|91772639|ref|YP_565331.1| - 2.4e-05 24.4 1.1 2.4 8.2 0.0 4.4 3 2 1 4 4 4 2 Bacterial protein of unknown function (DUF916) fn3_5 PF06280.12 gi|91772639|ref|YP_565331.1| - 0.00068 20.3 2.7 0.64 10.7 0.4 4.2 3 2 0 3 3 3 1 Fn3-like domain FixG_C PF11614.8 gi|91772639|ref|YP_565331.1| - 0.0015 18.7 0.4 0.22 11.7 0.1 3.3 2 1 0 3 3 3 1 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF1735 PF08522.10 gi|91772639|ref|YP_565331.1| - 0.0059 17.2 3.2 2.6 8.6 0.0 2.8 3 0 0 3 3 3 2 Domain of unknown function (DUF1735) BACON PF13004.7 gi|91772639|ref|YP_565331.1| - 0.015 15.3 0.5 0.2 11.7 0.0 2.8 2 1 0 2 2 2 0 Putative binding domain, N-terminal fn3_6 PF17766.1 gi|91772639|ref|YP_565331.1| - 0.018 15.2 0.1 2.1 8.5 0.0 2.6 2 0 0 2 2 2 0 Fibronectin type-III domain CBM_4_9 PF02018.17 gi|91772639|ref|YP_565331.1| - 0.04 14.2 0.2 1.2 9.4 0.0 2.5 1 1 1 2 2 2 0 Carbohydrate binding domain DUF11 PF01345.18 gi|91772639|ref|YP_565331.1| - 0.048 14.0 0.0 3 8.2 0.1 3.4 2 2 0 2 2 2 0 Domain of unknown function DUF11 MG1 PF17790.1 gi|91772639|ref|YP_565331.1| - 0.053 13.9 0.1 0.39 11.2 0.0 2.3 2 0 0 2 2 2 0 Macroglobulin domain MG1 A2M_BRD PF07703.14 gi|91772639|ref|YP_565331.1| - 0.073 13.4 0.4 0.23 11.8 0.4 1.8 1 1 0 1 1 1 0 Alpha-2-macroglobulin bait region domain DUF4352 PF11611.8 gi|91772639|ref|YP_565331.1| - 0.078 13.3 0.2 2.3 8.5 0.2 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4352) S-layer PF07752.11 gi|91772640|ref|YP_565332.1| - 1.1e-15 57.4 0.2 1.3e-15 57.1 0.2 1.1 1 0 0 1 1 1 1 S-layer protein E1-E2_ATPase PF00122.20 gi|91772641|ref|YP_565333.1| - 3.9e-54 182.9 5.2 3.9e-54 182.9 5.2 2.1 2 0 0 2 2 2 1 E1-E2 ATPase HMA PF00403.26 gi|91772641|ref|YP_565333.1| - 2.7e-51 171.9 4.2 1.1e-16 61.0 0.4 3.9 3 0 0 3 3 3 3 Heavy-metal-associated domain Hydrolase PF00702.26 gi|91772641|ref|YP_565333.1| - 7.9e-48 163.5 5.6 1.9e-47 162.3 5.6 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|91772641|ref|YP_565333.1| - 9.2e-07 28.8 5.4 5.7e-05 23.0 1.4 2.7 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase Poly_export PF02563.16 gi|91772641|ref|YP_565333.1| - 0.0021 18.2 0.4 6.5 7.0 0.0 4.5 4 0 0 4 4 4 1 Polysaccharide biosynthesis/export protein Tox-PL-2 PF15643.6 gi|91772641|ref|YP_565333.1| - 0.014 15.5 0.1 6.6 6.9 0.0 3.1 3 0 0 3 3 3 0 Papain fold toxin 2 DUF3213 PF11491.8 gi|91772641|ref|YP_565333.1| - 0.039 14.1 0.4 7.2 6.9 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3213) DUF1206 PF06724.11 gi|91772641|ref|YP_565333.1| - 0.06 13.4 0.3 0.23 11.6 0.3 2.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) HAD PF12710.7 gi|91772641|ref|YP_565333.1| - 0.075 13.4 0.0 0.55 10.6 0.0 2.3 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Thioredoxin_3 PF13192.6 gi|91772641|ref|YP_565333.1| - 0.16 12.0 2.6 7.4 6.7 0.1 3.8 3 0 0 3 3 3 0 Thioredoxin domain DUF997 PF06196.12 gi|91772641|ref|YP_565333.1| - 4.7 7.3 7.5 13 5.9 7.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF997) HMA PF00403.26 gi|91772642|ref|YP_565334.1| - 7.3e-19 68.0 2.3 8e-19 67.8 2.3 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain Thioredoxin_3 PF13192.6 gi|91772642|ref|YP_565334.1| - 0.024 14.7 0.2 0.043 13.9 0.2 1.5 1 1 0 1 1 1 0 Thioredoxin domain Fer2_BFD PF04324.15 gi|91772642|ref|YP_565334.1| - 0.078 13.4 0.3 2 8.8 0.1 2.1 2 0 0 2 2 2 0 BFD-like [2Fe-2S] binding domain NadA PF02445.16 gi|91772643|ref|YP_565335.1| - 7.6e-117 389.7 1.1 8.6e-117 389.6 1.1 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein CbiA PF01656.23 gi|91772644|ref|YP_565336.1| - 1.4e-14 54.3 0.0 1.8e-14 53.9 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4 PF00037.27 gi|91772644|ref|YP_565336.1| - 6.6e-14 51.0 13.4 1.8e-07 30.6 1.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain ParA PF10609.9 gi|91772644|ref|YP_565336.1| - 2.6e-09 36.9 1.0 0.0025 17.3 0.1 3.0 2 1 1 3 3 3 2 NUBPL iron-transfer P-loop NTPase Fer4_7 PF12838.7 gi|91772644|ref|YP_565336.1| - 3.8e-09 37.0 3.1 0.00077 20.0 0.3 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772644|ref|YP_565336.1| - 2e-08 34.2 10.4 2e-08 34.2 10.4 2.0 2 0 0 2 2 1 1 4Fe-4S dicluster domain AAA_31 PF13614.6 gi|91772644|ref|YP_565336.1| - 3.3e-07 30.4 0.0 0.012 15.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain Fer4_6 PF12837.7 gi|91772644|ref|YP_565336.1| - 5.7e-07 29.3 16.4 0.00014 21.8 2.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91772644|ref|YP_565336.1| - 1.1e-06 29.4 9.2 0.001 19.9 1.4 2.6 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|91772644|ref|YP_565336.1| - 1.7e-06 28.5 1.5 0.059 13.9 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772644|ref|YP_565336.1| - 3.3e-06 27.1 11.1 1.1e-05 25.4 11.5 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_NifH PF00142.18 gi|91772644|ref|YP_565336.1| - 7.6e-06 25.6 1.1 0.12 11.7 0.0 2.8 2 1 1 3 3 3 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Fer4_9 PF13187.6 gi|91772644|ref|YP_565336.1| - 1.5e-05 25.0 11.5 0.00012 22.1 12.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain RsgA_GTPase PF03193.16 gi|91772644|ref|YP_565336.1| - 3.2e-05 23.9 0.0 0.03 14.2 0.0 2.6 2 1 1 3 3 3 1 RsgA GTPase Fer4_2 PF12797.7 gi|91772644|ref|YP_565336.1| - 8e-05 22.5 10.7 0.048 13.8 2.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain PhoH PF02562.16 gi|91772644|ref|YP_565336.1| - 0.0001 21.9 0.5 0.23 10.9 0.7 2.3 2 0 0 2 2 2 2 PhoH-like protein AAA_16 PF13191.6 gi|91772644|ref|YP_565336.1| - 0.00013 22.4 0.0 0.0015 19.0 0.0 2.3 3 0 0 3 3 2 1 AAA ATPase domain Fer4_15 PF13459.6 gi|91772644|ref|YP_565336.1| - 0.00013 22.6 5.6 0.024 15.3 0.1 2.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain FTHFS PF01268.19 gi|91772644|ref|YP_565336.1| - 0.00056 18.2 0.0 0.0009 17.6 0.0 1.3 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase IstB_IS21 PF01695.17 gi|91772644|ref|YP_565336.1| - 0.00097 18.9 0.1 0.73 9.5 0.1 2.3 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_24 PF13479.6 gi|91772644|ref|YP_565336.1| - 0.0015 18.3 0.1 0.007 16.1 0.0 2.1 3 0 0 3 3 2 1 AAA domain Fer4_8 PF13183.6 gi|91772644|ref|YP_565336.1| - 0.0015 18.9 9.2 0.19 12.2 0.6 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772644|ref|YP_565336.1| - 0.0023 18.3 11.3 0.18 12.4 1.5 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain AAA PF00004.29 gi|91772644|ref|YP_565336.1| - 0.0025 18.2 0.2 0.25 11.8 0.0 2.8 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) ArsA_ATPase PF02374.15 gi|91772644|ref|YP_565336.1| - 0.0029 16.9 2.0 0.0039 16.4 0.7 1.8 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_22 PF13401.6 gi|91772644|ref|YP_565336.1| - 0.003 17.8 0.0 0.22 11.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain DUF2075 PF09848.9 gi|91772644|ref|YP_565336.1| - 0.0031 16.8 0.2 0.68 9.1 0.0 2.1 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 gi|91772644|ref|YP_565336.1| - 0.0044 16.8 0.9 0.091 12.5 0.2 2.5 2 1 1 3 3 3 1 AAA domain Fer4_13 PF13370.6 gi|91772644|ref|YP_565336.1| - 0.0054 17.2 11.1 0.13 12.8 1.9 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I RuvB_N PF05496.12 gi|91772644|ref|YP_565336.1| - 0.0089 15.8 0.0 0.51 10.1 0.0 2.2 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain DUF523 PF04463.12 gi|91772644|ref|YP_565336.1| - 0.019 15.0 0.2 0.28 11.2 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF523) ABC_tran PF00005.27 gi|91772644|ref|YP_565336.1| - 0.02 15.4 0.2 0.52 10.8 0.2 2.7 3 1 0 3 3 2 0 ABC transporter Fer4_3 PF12798.7 gi|91772644|ref|YP_565336.1| - 0.029 15.3 17.0 0.28 12.2 2.6 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_25 PF13481.6 gi|91772644|ref|YP_565336.1| - 0.032 13.8 2.0 0.57 9.7 1.1 2.2 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|91772644|ref|YP_565336.1| - 0.035 13.5 0.0 5.1 6.4 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ATPase PF06745.13 gi|91772644|ref|YP_565336.1| - 0.039 13.3 0.4 0.19 11.0 0.1 2.0 2 0 0 2 2 2 0 KaiC AAA_18 PF13238.6 gi|91772644|ref|YP_565336.1| - 0.046 14.3 0.6 0.89 10.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|91772644|ref|YP_565336.1| - 0.048 13.4 0.0 0.064 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|91772644|ref|YP_565336.1| - 0.059 12.5 0.1 0.88 8.7 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain Sigma54_activat PF00158.26 gi|91772644|ref|YP_565336.1| - 0.062 13.0 0.0 1.7 8.3 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_23 PF13476.6 gi|91772644|ref|YP_565336.1| - 0.095 13.2 1.8 0.17 12.3 1.8 1.3 1 0 0 1 1 1 0 AAA domain DnaB_C PF03796.15 gi|91772644|ref|YP_565336.1| - 0.1 11.9 0.1 4.1 6.7 0.1 2.2 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain NACHT PF05729.12 gi|91772644|ref|YP_565336.1| - 0.11 12.4 0.0 0.35 10.8 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_11 PF13086.6 gi|91772644|ref|YP_565336.1| - 0.14 11.9 0.0 10 5.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|91772644|ref|YP_565336.1| - 0.21 10.6 0.1 1.8 7.6 0.1 2.0 2 0 0 2 2 2 0 Type II/IV secretion system protein Zeta_toxin PF06414.12 gi|91772644|ref|YP_565336.1| - 0.22 10.8 0.1 1.2 8.4 0.1 2.0 2 0 0 2 2 2 0 Zeta toxin AAA_29 PF13555.6 gi|91772644|ref|YP_565336.1| - 0.27 11.0 1.6 0.71 9.7 0.3 2.3 3 0 0 3 3 2 0 P-loop containing region of AAA domain Fer4_22 PF17179.4 gi|91772644|ref|YP_565336.1| - 0.92 10.4 11.6 2.4 9.1 2.3 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain CGGC PF08821.11 gi|91772645|ref|YP_565337.1| - 1.9e-30 105.2 2.1 2.1e-30 105.0 2.1 1.0 1 0 0 1 1 1 1 CGGC domain CbiA PF01656.23 gi|91772646|ref|YP_565338.1| - 8.8e-20 71.1 0.0 1.1e-19 70.7 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|91772646|ref|YP_565338.1| - 1.2e-15 57.7 0.1 1e-08 34.9 0.0 3.0 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4 PF00037.27 gi|91772646|ref|YP_565338.1| - 1e-09 37.7 10.8 9.3e-06 25.3 1.2 3.4 5 0 0 5 5 4 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|91772646|ref|YP_565338.1| - 1.4e-07 31.3 16.5 0.00017 21.5 1.6 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain AAA_31 PF13614.6 gi|91772646|ref|YP_565338.1| - 3.8e-07 30.2 0.1 6.8e-05 22.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain Fer4_10 PF13237.6 gi|91772646|ref|YP_565338.1| - 5.6e-06 26.4 13.6 0.00019 21.5 0.8 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91772646|ref|YP_565338.1| - 5.8e-06 26.4 9.6 3.4e-05 23.9 9.8 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772646|ref|YP_565338.1| - 2e-05 25.4 8.9 0.00094 20.1 0.6 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|91772646|ref|YP_565338.1| - 7.7e-05 23.2 20.1 0.001 19.6 10.5 2.5 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772646|ref|YP_565338.1| - 0.00011 22.2 8.5 0.00011 22.2 8.5 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_NifH PF00142.18 gi|91772646|ref|YP_565338.1| - 0.0024 17.3 0.0 1.4 8.3 0.0 2.3 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.6 gi|91772646|ref|YP_565338.1| - 0.0045 16.6 0.0 0.011 15.3 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_26 PF13500.6 gi|91772646|ref|YP_565338.1| - 0.0055 16.5 0.3 0.085 12.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|91772646|ref|YP_565338.1| - 0.0064 15.7 0.5 0.011 14.9 0.5 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase Fer4_2 PF12797.7 gi|91772646|ref|YP_565338.1| - 0.01 15.9 1.8 0.01 15.9 1.8 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|91772646|ref|YP_565338.1| - 0.036 14.9 5.9 1.2 10.0 1.0 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain PhoH PF02562.16 gi|91772646|ref|YP_565338.1| - 0.04 13.4 0.2 0.083 12.3 0.2 1.5 2 0 0 2 2 2 0 PhoH-like protein Fer4_4 PF12800.7 gi|91772646|ref|YP_565338.1| - 0.042 14.4 17.1 0.058 13.9 1.7 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain MipZ PF09140.11 gi|91772646|ref|YP_565338.1| - 0.053 12.8 0.0 0.073 12.3 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ Fer4_8 PF13183.6 gi|91772646|ref|YP_565338.1| - 0.07 13.6 11.1 0.26 11.8 1.8 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Zot PF05707.12 gi|91772646|ref|YP_565338.1| - 0.19 11.4 0.0 0.8 9.3 0.0 2.0 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) DUF2075 PF09848.9 gi|91772646|ref|YP_565338.1| - 0.19 10.9 0.0 0.24 10.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Fer4_15 PF13459.6 gi|91772646|ref|YP_565338.1| - 0.5 11.1 6.5 5.3 7.9 1.5 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|91772646|ref|YP_565338.1| - 0.76 10.9 21.3 1.4 10.1 6.6 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91772646|ref|YP_565338.1| - 0.85 10.2 13.5 0.66 10.6 3.1 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain Cation_efflux PF01545.21 gi|91772647|ref|YP_565339.1| - 2.2e-42 145.1 17.2 2.8e-42 144.7 17.2 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|91772647|ref|YP_565339.1| - 2e-13 50.3 0.3 4e-13 49.3 0.3 1.5 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Nitro_FeMo-Co PF02579.17 gi|91772647|ref|YP_565339.1| - 2.7e-13 50.0 0.0 5.9e-13 49.0 0.0 1.5 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF1056 PF06341.11 gi|91772647|ref|YP_565339.1| - 0.13 12.6 3.9 0.49 10.7 3.9 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1056) FrhB_FdhB_C PF04432.13 gi|91772648|ref|YP_565340.1| - 3.5e-36 124.4 0.1 8.7e-36 123.1 0.1 1.7 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus NIR_SIR PF01077.22 gi|91772648|ref|YP_565340.1| - 3.6e-26 91.6 0.1 7.7e-26 90.5 0.1 1.5 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain FrhB_FdhB_N PF04422.13 gi|91772648|ref|YP_565340.1| - 4e-22 78.2 0.1 7.6e-22 77.3 0.1 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.27 gi|91772648|ref|YP_565340.1| - 1e-17 63.1 37.9 7.6e-07 28.7 1.0 5.7 6 0 0 6 6 6 3 4Fe-4S binding domain NIR_SIR_ferr PF03460.17 gi|91772648|ref|YP_565340.1| - 1.3e-11 44.1 0.0 3.3e-11 42.9 0.0 1.7 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4_2 PF12797.7 gi|91772648|ref|YP_565340.1| - 3.8e-09 36.1 37.1 0.00063 19.7 1.9 5.6 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91772648|ref|YP_565340.1| - 4.8e-09 36.7 34.2 2.5e-05 24.8 10.5 5.2 3 2 2 5 5 5 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772648|ref|YP_565340.1| - 6.1e-09 35.9 30.8 0.00046 20.2 0.5 4.1 3 1 1 4 4 4 4 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91772648|ref|YP_565340.1| - 2.1e-08 34.2 29.2 0.0012 19.0 0.5 4.1 4 0 0 4 4 4 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91772648|ref|YP_565340.1| - 2.6e-08 33.6 22.8 2.9e-05 24.0 2.7 5.6 8 0 0 8 8 5 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91772648|ref|YP_565340.1| - 1.1e-07 31.9 35.1 4.3e-06 26.8 10.0 4.5 3 1 2 5 5 5 4 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91772648|ref|YP_565340.1| - 4.1e-06 27.4 23.1 0.011 16.5 0.8 4.7 3 1 1 4 4 4 3 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|91772648|ref|YP_565340.1| - 7.5e-05 23.1 23.7 0.033 14.6 0.7 4.8 4 1 0 4 4 4 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772648|ref|YP_565340.1| - 0.00011 23.1 30.1 0.14 13.1 0.4 5.2 5 1 0 5 5 5 3 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|91772648|ref|YP_565340.1| - 0.00057 20.4 23.4 0.013 16.0 0.1 4.4 5 0 0 5 5 4 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|91772648|ref|YP_565340.1| - 0.00094 19.7 26.4 0.071 13.7 0.5 4.9 5 1 0 5 5 5 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91772648|ref|YP_565340.1| - 0.021 15.0 2.1 0.021 15.0 2.1 3.1 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|91772648|ref|YP_565340.1| - 0.36 11.7 27.0 0.053 14.4 2.8 4.4 4 1 1 5 5 4 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772648|ref|YP_565340.1| - 1.4 9.6 45.9 0.13 12.9 2.7 6.4 7 0 0 7 7 6 0 4Fe-4S binding domain Nitro_FeMo-Co PF02579.17 gi|91772649|ref|YP_565341.1| - 1.8e-20 73.0 0.0 2.8e-20 72.5 0.0 1.3 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor Nitro_FeMo-Co PF02579.17 gi|91772650|ref|YP_565342.1| - 4.3e-25 87.9 0.0 5.7e-25 87.5 0.0 1.2 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF169 PF02596.15 gi|91772651|ref|YP_565343.1| - 2e-54 184.7 0.0 2.4e-54 184.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 Prok-JAB PF14464.6 gi|91772652|ref|YP_565344.1| - 2.1e-08 34.0 0.0 3.1e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.15 gi|91772652|ref|YP_565344.1| - 0.0027 17.6 0.0 0.0037 17.2 0.0 1.3 1 0 0 1 1 1 1 RadC-like JAB domain DDE_Tnp_IS240 PF13610.6 gi|91772654|ref|YP_565346.1| - 0.0054 17.0 1.6 0.014 15.6 1.6 1.7 1 1 0 1 1 1 1 DDE domain Zn_Tnp_IS1595 PF12760.7 gi|91772654|ref|YP_565346.1| - 0.0073 16.3 1.5 0.025 14.5 1.5 1.9 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|91772654|ref|YP_565346.1| - 0.0091 16.1 0.4 3.9 7.7 0.0 2.6 2 0 0 2 2 2 2 Zinc ribbon domain zf-ISL3 PF14690.6 gi|91772654|ref|YP_565346.1| - 0.01 16.5 4.7 0.01 16.5 4.7 2.2 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Lar_restr_allev PF14354.6 gi|91772654|ref|YP_565346.1| - 0.034 14.5 0.2 0.074 13.4 0.2 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar DUF4817 PF16087.5 gi|91772654|ref|YP_565346.1| - 0.063 13.1 0.6 0.27 11.1 0.0 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain (DUF4817) UPF0489 PF12640.7 gi|91772654|ref|YP_565346.1| - 0.08 13.2 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 UPF0489 domain zf-H2C2_2 PF13465.6 gi|91772654|ref|YP_565346.1| - 0.47 11.0 4.8 2.5 8.7 1.9 2.6 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2_4 PF13894.6 gi|91772654|ref|YP_565346.1| - 1.9 9.6 6.0 2.5 9.2 0.3 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger zf-C2H2 PF00096.26 gi|91772654|ref|YP_565346.1| - 1.9 9.1 5.9 2.7 8.6 1.8 3.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-RRN7 PF11781.8 gi|91772654|ref|YP_565346.1| - 2.2 8.0 4.7 3.1 7.6 0.0 2.5 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF92 PF01940.16 gi|91772655|ref|YP_565347.1| - 2.7e-56 190.7 17.0 2.7e-56 190.7 17.0 2.7 3 1 0 3 3 3 1 Integral membrane protein DUF92 SIR2 PF02146.17 gi|91772656|ref|YP_565348.1| - 3.6e-52 176.9 0.0 4.2e-52 176.6 0.0 1.0 1 0 0 1 1 1 1 Sir2 family Vps36-NZF-N PF16988.5 gi|91772656|ref|YP_565348.1| - 0.017 14.5 0.6 3.1 7.2 0.0 2.4 1 1 1 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain ADK_lid PF05191.14 gi|91772656|ref|YP_565348.1| - 0.05 13.6 0.6 0.1 12.6 0.6 1.6 1 0 0 1 1 1 0 Adenylate kinase, active site lid HypA PF01155.19 gi|91772656|ref|YP_565348.1| - 0.07 13.2 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Orn_Arg_deC_N PF02784.16 gi|91772657|ref|YP_565349.1| - 1.6e-29 103.0 0.0 2e-29 102.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|91772657|ref|YP_565349.1| - 2.7e-20 72.4 0.0 2.9e-20 72.3 0.0 1.3 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TPR_1 PF00515.28 gi|91772658|ref|YP_565350.1| - 3.5e-137 441.3 57.4 2.2e-08 33.5 0.2 24.3 24 0 0 24 24 24 21 Tetratricopeptide repeat TPR_2 PF07719.17 gi|91772658|ref|YP_565350.1| - 1.6e-131 418.1 45.2 3.6e-08 32.9 0.0 24.2 24 0 0 24 24 24 23 Tetratricopeptide repeat TPR_11 PF13414.6 gi|91772658|ref|YP_565350.1| - 3.4e-112 365.9 77.2 6.9e-07 28.9 0.0 24.2 8 6 16 24 24 24 22 TPR repeat TPR_8 PF13181.6 gi|91772658|ref|YP_565350.1| - 1.4e-105 336.9 63.3 8.9e-07 28.6 0.1 23.3 23 0 0 23 23 23 18 Tetratricopeptide repeat TPR_16 PF13432.6 gi|91772658|ref|YP_565350.1| - 4.3e-89 292.9 2.6 1e-09 38.9 0.0 16.0 10 3 7 17 17 17 16 Tetratricopeptide repeat TPR_17 PF13431.6 gi|91772658|ref|YP_565350.1| - 2.6e-65 212.2 54.8 5.8e-05 23.2 0.0 23.9 24 1 1 25 25 25 14 Tetratricopeptide repeat TPR_14 PF13428.6 gi|91772658|ref|YP_565350.1| - 4.9e-63 204.4 13.1 0.0011 19.6 0.0 21.0 7 6 15 22 22 22 13 Tetratricopeptide repeat TPR_12 PF13424.6 gi|91772658|ref|YP_565350.1| - 2.4e-53 178.3 35.0 1.1e-05 25.7 0.1 16.2 8 5 7 15 15 15 13 Tetratricopeptide repeat TPR_19 PF14559.6 gi|91772658|ref|YP_565350.1| - 2.5e-46 156.1 24.9 1.3e-05 25.6 0.0 14.2 11 3 4 15 15 15 9 Tetratricopeptide repeat TPR_9 PF13371.6 gi|91772658|ref|YP_565350.1| - 1.9e-45 152.8 0.0 0.00039 20.5 0.0 13.2 10 5 4 14 14 13 9 Tetratricopeptide repeat TPR_7 PF13176.6 gi|91772658|ref|YP_565350.1| - 5.4e-42 138.8 35.2 0.0098 15.9 0.0 19.5 18 3 3 21 21 20 11 Tetratricopeptide repeat TPR_6 PF13174.6 gi|91772658|ref|YP_565350.1| - 4.3e-39 130.6 33.7 0.1 13.3 0.0 20.3 21 0 0 21 21 20 8 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|91772658|ref|YP_565350.1| - 6.7e-32 109.6 39.0 0.00015 22.0 0.3 11.9 7 3 7 14 14 14 9 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 gi|91772658|ref|YP_565350.1| - 3.3e-18 65.9 18.7 0.2 10.5 0.4 9.8 7 3 4 11 11 11 8 NMDA receptor-regulated protein 1 DUF3856 PF12968.7 gi|91772658|ref|YP_565350.1| - 2e-16 60.3 6.0 0.32 11.0 0.1 12.4 9 6 3 12 12 12 2 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.6 gi|91772658|ref|YP_565350.1| - 4e-16 58.8 23.8 0.084 13.0 0.0 13.2 13 1 2 15 15 13 3 Fis1 C-terminal tetratricopeptide repeat MIT PF04212.18 gi|91772658|ref|YP_565350.1| - 3e-13 49.6 44.1 0.0072 16.4 0.1 15.4 17 0 0 17 17 15 3 MIT (microtubule interacting and transport) domain TPR_10 PF13374.6 gi|91772658|ref|YP_565350.1| - 6.8e-12 44.9 25.3 2.1 8.3 0.0 15.7 18 0 0 18 18 18 1 Tetratricopeptide repeat TPR_15 PF13429.6 gi|91772658|ref|YP_565350.1| - 1.7e-08 34.0 7.8 0.64 9.2 0.1 9.0 6 4 3 10 10 10 2 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 gi|91772658|ref|YP_565350.1| - 4.3e-06 27.2 1.6 3 8.3 0.1 6.8 5 2 3 8 8 7 1 Alkyl sulfatase dimerisation BTAD PF03704.17 gi|91772658|ref|YP_565350.1| - 1.6e-05 25.3 7.0 2.5 8.5 0.0 8.2 8 2 2 10 10 9 1 Bacterial transcriptional activator domain TPR_5 PF12688.7 gi|91772658|ref|YP_565350.1| - 6.5e-05 23.2 5.8 43 4.4 0.0 8.9 9 2 2 11 11 10 0 Tetratrico peptide repeat TPR_3 PF07720.12 gi|91772658|ref|YP_565350.1| - 9.1e-05 22.4 43.2 0.36 10.9 2.0 13.4 18 0 0 18 18 13 2 Tetratricopeptide repeat PPR PF01535.20 gi|91772658|ref|YP_565350.1| - 0.0012 18.9 1.8 60 4.2 0.0 7.5 9 0 0 9 9 6 0 PPR repeat NRBF2_MIT PF17169.4 gi|91772658|ref|YP_565350.1| - 0.0017 18.6 4.3 9 6.6 0.0 6.6 8 0 0 8 8 6 0 MIT domain of nuclear receptor-binding factor 2 RPN7 PF10602.9 gi|91772658|ref|YP_565350.1| - 0.0036 17.0 18.2 9.3 5.9 0.0 9.6 10 3 2 12 12 11 0 26S proteasome subunit RPN7 PknG_TPR PF16918.5 gi|91772658|ref|YP_565350.1| - 0.013 14.3 7.5 2.5 6.7 0.4 5.7 6 1 0 6 6 6 0 Protein kinase G tetratricopeptide repeat TOM20_plant PF06552.12 gi|91772658|ref|YP_565350.1| - 0.046 13.5 5.3 13 5.5 0.0 5.7 4 2 1 6 6 6 0 Plant specific mitochondrial import receptor subunit TOM20 TraD_N PF12615.8 gi|91772658|ref|YP_565350.1| - 0.13 13.0 0.1 0.55 11.0 0.1 2.1 1 0 0 1 1 1 0 F sex factor protein N terminal PPTA PF01239.22 gi|91772658|ref|YP_565350.1| - 0.15 11.8 3.6 39 4.2 0.0 5.2 5 0 0 5 5 5 0 Protein prenyltransferase alpha subunit repeat Exonuc_VII_S PF02609.16 gi|91772658|ref|YP_565350.1| - 0.26 11.4 1.5 30 4.8 0.0 4.4 3 1 0 3 3 3 0 Exonuclease VII small subunit DUF764 PF05561.11 gi|91772658|ref|YP_565350.1| - 0.63 9.8 5.2 0.38 10.5 0.2 2.8 3 0 0 3 3 3 0 Borrelia burgdorferi protein of unknown function (DUF764) Coatomer_E PF04733.14 gi|91772658|ref|YP_565350.1| - 1.3 8.4 7.5 26 4.1 0.0 5.0 5 2 1 6 6 5 0 Coatomer epsilon subunit HTH_Bact PF18768.1 gi|91772658|ref|YP_565350.1| - 4.9 6.8 16.6 18 5.0 0.2 7.0 6 1 0 6 6 6 0 Helix-turn-helix bacterial domain CMD PF02627.20 gi|91772659|ref|YP_565351.1| - 2.4e-20 72.4 0.7 2.8e-20 72.1 0.7 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family HTH_45 PF14947.6 gi|91772660|ref|YP_565352.1| - 1.2e-19 70.1 0.7 1.3e-19 69.9 0.7 1.0 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_24 PF13412.6 gi|91772660|ref|YP_565352.1| - 4.5e-08 32.5 0.1 6.3e-08 32.1 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF2513 PF10711.9 gi|91772660|ref|YP_565352.1| - 1.1e-05 25.7 0.1 1.3e-05 25.4 0.1 1.1 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HxlR PF01638.17 gi|91772660|ref|YP_565352.1| - 1.4e-05 24.8 0.0 1.6e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|91772660|ref|YP_565352.1| - 2e-05 24.4 0.3 3.5e-05 23.7 0.3 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF4364 PF14277.6 gi|91772660|ref|YP_565352.1| - 2.3e-05 24.2 0.1 2.9e-05 23.9 0.1 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_27 PF13463.6 gi|91772660|ref|YP_565352.1| - 2.8e-05 24.5 0.0 3.4e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|91772660|ref|YP_565352.1| - 0.00017 21.4 0.0 0.00025 20.9 0.0 1.2 1 0 0 1 1 1 1 MarR family DUF505 PF04458.12 gi|91772660|ref|YP_565352.1| - 0.00037 19.0 0.3 0.00048 18.6 0.3 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF505) DUF3116 PF11313.8 gi|91772660|ref|YP_565352.1| - 0.0039 17.0 1.4 0.031 14.1 1.4 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF3116) HTH_34 PF13601.6 gi|91772660|ref|YP_565352.1| - 0.0055 16.9 0.1 0.0071 16.5 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain FtsK_gamma PF09397.10 gi|91772660|ref|YP_565352.1| - 0.0075 16.0 0.1 0.01 15.6 0.1 1.2 1 0 0 1 1 1 1 Ftsk gamma domain Mrr_N PF14338.6 gi|91772660|ref|YP_565352.1| - 0.0086 16.2 0.1 0.022 14.9 0.1 1.8 1 1 0 1 1 1 1 Mrr N-terminal domain Ribosomal_S19e PF01090.19 gi|91772660|ref|YP_565352.1| - 0.01 15.5 0.0 0.016 14.9 0.0 1.3 1 1 0 1 1 1 0 Ribosomal protein S19e STN1_2 PF09170.10 gi|91772660|ref|YP_565352.1| - 0.017 15.4 0.1 0.02 15.1 0.1 1.1 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 DUF1495 PF07381.11 gi|91772660|ref|YP_565352.1| - 0.038 13.8 0.1 0.07 13.0 0.0 1.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain (DUF1495) HTH_11 PF08279.12 gi|91772660|ref|YP_565352.1| - 0.044 13.7 0.1 0.062 13.3 0.1 1.3 1 0 0 1 1 1 0 HTH domain LexA_DNA_bind PF01726.16 gi|91772660|ref|YP_565352.1| - 0.065 13.0 0.1 0.14 12.0 0.1 1.7 1 1 0 1 1 1 0 LexA DNA binding domain TrmB PF01978.19 gi|91772660|ref|YP_565352.1| - 0.079 12.8 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Rio2_N PF09202.11 gi|91772660|ref|YP_565352.1| - 0.099 12.9 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Rio2, N-terminal ABC_tran PF00005.27 gi|91772662|ref|YP_565354.1| - 2e-32 112.5 0.0 3.4e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|91772662|ref|YP_565354.1| - 8.6e-06 25.3 0.1 6.7e-05 22.4 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91772662|ref|YP_565354.1| - 1.5e-05 24.6 0.0 3.1e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|91772662|ref|YP_565354.1| - 5e-05 23.3 0.1 0.07 12.9 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|91772662|ref|YP_565354.1| - 0.00067 20.1 0.1 0.0041 17.5 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|91772662|ref|YP_565354.1| - 0.0015 18.5 0.1 0.0032 17.4 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 gi|91772662|ref|YP_565354.1| - 0.0036 17.6 0.0 0.014 15.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|91772662|ref|YP_565354.1| - 0.0037 17.0 0.0 0.046 13.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|91772662|ref|YP_565354.1| - 0.0062 17.1 0.1 0.018 15.5 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|91772662|ref|YP_565354.1| - 0.046 13.4 0.3 0.077 12.7 0.1 1.5 2 0 0 2 2 2 0 AAA ATPase domain 5_3_exonuc_N PF02739.16 gi|91772662|ref|YP_565354.1| - 0.081 12.8 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain ATPase PF06745.13 gi|91772662|ref|YP_565354.1| - 0.12 11.7 0.1 7.8 5.8 0.0 2.2 2 0 0 2 2 2 0 KaiC DUF3987 PF13148.6 gi|91772662|ref|YP_565354.1| - 0.14 11.1 0.0 0.21 10.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) CARDB PF07705.11 gi|91772663|ref|YP_565355.1| - 7.2e-06 26.2 9.8 1.2 9.4 0.0 5.0 3 2 2 5 5 5 4 CARDB NPCBM_assoc PF10633.9 gi|91772663|ref|YP_565355.1| - 0.0031 17.7 0.0 1.2 9.4 0.0 4.2 4 1 0 4 4 4 1 NPCBM-associated, NEW3 domain of alpha-galactosidase Gram_pos_anchor PF00746.21 gi|91772663|ref|YP_565355.1| - 0.015 15.2 0.9 0.032 14.2 0.9 1.5 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Peptidase_M73 PF12389.8 gi|91772663|ref|YP_565355.1| - 0.24 11.2 2.8 0.78 9.5 0.1 2.4 2 1 0 2 2 2 0 Camelysin metallo-endopeptidase MacB_PCD PF12704.7 gi|91772664|ref|YP_565356.1| - 1e-25 91.3 0.3 1e-25 91.3 0.3 3.0 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|91772664|ref|YP_565356.1| - 8.2e-13 48.7 8.6 8.2e-13 48.7 8.6 3.0 3 0 0 3 3 3 1 FtsX-like permease family Collectrin PF16959.5 gi|91772664|ref|YP_565356.1| - 0.028 14.2 1.4 4.4 7.1 0.7 2.8 2 0 0 2 2 2 0 Renal amino acid transporter EamA PF00892.20 gi|91772665|ref|YP_565357.1| - 3.9e-15 56.2 9.5 4.6e-15 56.0 9.5 1.0 1 0 0 1 1 1 1 EamA-like transporter family DUF4668 PF15701.5 gi|91772665|ref|YP_565357.1| - 1.2 8.9 4.3 0.57 10.0 0.3 2.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4668) Transposase_mut PF00872.18 gi|91772666|ref|YP_565358.1| - 3.4e-111 371.8 4.0 4.3e-111 371.4 4.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|91772666|ref|YP_565358.1| - 3e-10 40.4 0.0 8.5e-10 38.9 0.0 1.8 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|91772666|ref|YP_565358.1| - 0.00011 21.8 0.2 0.00017 21.2 0.2 1.3 1 0 0 1 1 1 1 Transposase IS66 family DUF4423 PF14394.6 gi|91772666|ref|YP_565358.1| - 0.029 14.1 0.3 0.11 12.2 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) SpvB PF03534.13 gi|91772666|ref|YP_565358.1| - 0.036 13.2 0.1 0.067 12.4 0.1 1.4 1 0 0 1 1 1 0 Salmonella virulence plasmid 65kDa B protein DDE_Tnp_IS240 PF13610.6 gi|91772666|ref|YP_565358.1| - 0.72 10.1 5.6 48 4.2 4.0 2.9 2 1 0 2 2 2 0 DDE domain DDE_Tnp_1 PF01609.21 gi|91772667|ref|YP_565359.1| - 2.4e-06 27.3 0.5 4e-06 26.6 0.5 1.3 1 0 0 1 1 1 1 Transposase DDE domain Hit1_C PF18268.1 gi|91772667|ref|YP_565359.1| - 0.0098 16.0 0.1 0.026 14.6 0.1 1.7 1 0 0 1 1 1 1 Hit1 C-terminal TetR_C_8 PF14278.6 gi|91772667|ref|YP_565359.1| - 0.046 13.8 1.8 2.2 8.4 0.1 2.6 2 0 0 2 2 2 0 Transcriptional regulator C-terminal region Fur_reg_FbpB PF13040.6 gi|91772667|ref|YP_565359.1| - 0.34 10.5 1.6 3.2 7.4 0.1 2.4 2 0 0 2 2 2 0 Fur-regulated basic protein B HATPase_c PF02518.26 gi|91772668|ref|YP_565360.1| - 8.4e-33 113.2 0.3 4.3e-32 110.9 0.1 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91772668|ref|YP_565360.1| - 1.1e-18 67.1 0.0 2.2e-18 66.1 0.0 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 gi|91772668|ref|YP_565360.1| - 1.3e-08 34.9 0.0 2.9e-08 33.7 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|91772668|ref|YP_565360.1| - 2.1e-08 34.0 0.0 4.5e-08 32.9 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 gi|91772668|ref|YP_565360.1| - 2.7e-06 27.6 0.0 8.5e-06 26.0 0.0 1.9 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|91772668|ref|YP_565360.1| - 0.00065 19.9 0.0 0.0028 17.9 0.0 1.9 1 1 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.6 gi|91772668|ref|YP_565360.1| - 0.001 18.9 0.3 0.039 13.8 0.0 2.3 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|91772668|ref|YP_565360.1| - 0.0043 17.0 0.0 0.011 15.7 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 gi|91772668|ref|YP_565360.1| - 0.047 13.6 0.0 0.15 12.0 0.0 1.9 1 0 0 1 1 1 0 GHKL domain DUF4464 PF14713.6 gi|91772668|ref|YP_565360.1| - 0.12 12.0 0.2 0.12 12.0 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4464) GPDPase_memb PF10110.9 gi|91772668|ref|YP_565360.1| - 0.19 10.5 2.4 0.3 9.8 2.4 1.3 1 0 0 1 1 1 0 Membrane domain of glycerophosphoryl diester phosphodiesterase LepB_GAP_N PF18172.1 gi|91772669|ref|YP_565361.1| - 0.036 14.0 0.4 0.042 13.7 0.4 1.1 1 0 0 1 1 1 0 LepB GAP domain N-terminal subdomain Rep_2 PF01719.17 gi|91772670|ref|YP_565362.1| - 0.0057 16.5 2.0 0.0062 16.4 2.0 1.1 1 0 0 1 1 1 1 Plasmid replication protein Adeno_terminal PF02459.15 gi|91772670|ref|YP_565362.1| - 0.014 13.8 0.8 0.016 13.7 0.8 1.0 1 0 0 1 1 1 0 Adenoviral DNA terminal protein ATP-gua_PtransN PF02807.15 gi|91772670|ref|YP_565362.1| - 0.02 15.3 0.0 0.062 13.7 0.0 1.8 2 0 0 2 2 2 0 ATP:guanido phosphotransferase, N-terminal domain Lipase_GDSL PF00657.22 gi|91772670|ref|YP_565362.1| - 0.047 13.7 0.3 0.051 13.5 0.3 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase AUX_IAA PF02309.16 gi|91772670|ref|YP_565362.1| - 0.047 13.5 0.1 0.048 13.5 0.1 1.1 1 0 0 1 1 1 0 AUX/IAA family 7TMR-DISM_7TM PF07695.11 gi|91772671|ref|YP_565363.1| - 0.0012 18.7 7.2 0.0014 18.6 7.2 1.0 1 0 0 1 1 1 1 7TM diverse intracellular signalling DUF373 PF04123.13 gi|91772671|ref|YP_565363.1| - 0.0027 17.2 3.2 0.003 17.0 3.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) MARVEL PF01284.23 gi|91772671|ref|YP_565363.1| - 0.0031 17.5 2.6 0.0037 17.3 2.6 1.1 1 0 0 1 1 1 1 Membrane-associating domain DUF2208 PF09973.9 gi|91772671|ref|YP_565363.1| - 0.0039 16.8 5.0 0.0046 16.6 4.6 1.3 1 1 0 1 1 1 1 Predicted membrane protein (DUF2208) DUF973 PF06157.11 gi|91772671|ref|YP_565363.1| - 0.016 14.3 3.4 0.018 14.1 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) DUF3185 PF11381.8 gi|91772671|ref|YP_565363.1| - 0.018 15.0 1.4 4.8 7.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) DUF3784 PF12650.7 gi|91772671|ref|YP_565363.1| - 0.019 15.2 7.6 0.022 14.9 7.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) Phage_holin_3_6 PF07332.11 gi|91772671|ref|YP_565363.1| - 0.03 14.3 3.5 0.036 14.1 3.5 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 gi|91772671|ref|YP_565363.1| - 0.038 12.7 4.0 0.04 12.7 4.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2583 PF10762.9 gi|91772671|ref|YP_565363.1| - 0.054 13.9 1.3 0.061 13.8 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2583) CoA_binding_3 PF13727.6 gi|91772671|ref|YP_565363.1| - 0.086 12.9 1.6 0.095 12.7 1.6 1.0 1 0 0 1 1 1 0 CoA-binding domain Tetraspanin PF00335.20 gi|91772671|ref|YP_565363.1| - 0.095 12.4 5.2 0.093 12.4 5.2 1.0 1 0 0 1 1 1 0 Tetraspanin family SdpI PF13630.6 gi|91772671|ref|YP_565363.1| - 0.17 12.0 5.3 0.21 11.8 5.3 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family Wzy_C PF04932.15 gi|91772671|ref|YP_565363.1| - 0.17 11.5 4.1 0.2 11.3 4.1 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF5381 PF17353.2 gi|91772671|ref|YP_565363.1| - 0.5 10.1 5.4 0.55 10.0 5.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) DUF4131 PF13567.6 gi|91772671|ref|YP_565363.1| - 0.9 9.2 3.1 1 9.0 3.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Neurensin PF14927.6 gi|91772671|ref|YP_565363.1| - 1.1 8.9 6.5 0.3 10.8 0.8 2.0 1 1 1 2 2 2 0 Neurensin Ac76 PF05814.11 gi|91772671|ref|YP_565363.1| - 2.2 8.3 8.4 2.8 8.0 8.4 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) FUSC PF04632.12 gi|91772671|ref|YP_565363.1| - 2.6 6.5 5.9 2.8 6.3 5.9 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family WAPL PF07814.13 gi|91772672|ref|YP_565364.1| - 0.0082 15.0 0.8 0.01 14.7 0.8 1.1 1 0 0 1 1 1 1 Wings apart-like protein regulation of heterochromatin TruD PF01142.18 gi|91772672|ref|YP_565364.1| - 0.017 14.0 0.2 0.02 13.8 0.2 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) PYRIN PF02758.16 gi|91772672|ref|YP_565364.1| - 0.034 14.3 0.2 0.064 13.4 0.2 1.5 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain SNARE_assoc PF09335.11 gi|91772673|ref|YP_565365.1| - 2.7e-08 34.3 6.0 2.7e-08 34.3 6.0 1.9 1 1 1 2 2 2 1 SNARE associated Golgi protein DUF5345 PF17280.2 gi|91772673|ref|YP_565365.1| - 0.15 12.0 0.0 0.15 12.0 0.0 2.4 3 0 0 3 3 3 0 Family of unknown function (DUF5345) Claudin_2 PF13903.6 gi|91772673|ref|YP_565365.1| - 1.9 8.2 8.0 0.26 11.0 2.6 1.9 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction DUF2227 PF09988.9 gi|91772674|ref|YP_565366.1| - 3.2e-35 121.5 8.4 3.6e-33 114.8 8.4 2.0 1 1 0 1 1 1 1 Uncharacterized metal-binding protein (DUF2227) YdjM PF04307.14 gi|91772674|ref|YP_565366.1| - 0.00073 18.9 1.4 0.00073 18.9 1.4 1.6 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Cyt_bd_oxida_II PF02322.15 gi|91772674|ref|YP_565366.1| - 0.004 16.6 2.0 0.0048 16.3 2.0 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II DUF2631 PF10939.8 gi|91772674|ref|YP_565366.1| - 0.11 12.3 1.8 0.55 10.1 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2631) CorA PF01544.18 gi|91772675|ref|YP_565367.1| - 4.9e-75 252.6 6.6 6.2e-75 252.2 6.6 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein MS_channel PF00924.18 gi|91772676|ref|YP_565368.1| - 4.5e-21 75.3 0.4 4.5e-21 75.3 0.4 1.9 2 0 0 2 2 2 1 Mechanosensitive ion channel CbiQ PF02361.16 gi|91772676|ref|YP_565368.1| - 8.3 6.0 17.2 12 5.5 17.2 1.2 1 0 0 1 1 1 0 Cobalt transport protein DDE_Tnp_IS66 PF03050.14 gi|91772677|ref|YP_565369.1| - 1.9e-67 227.7 0.4 6.3e-67 226.0 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91772677|ref|YP_565369.1| - 9e-11 42.0 3.8 2.7e-10 40.5 3.8 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 SlyX PF04102.12 gi|91772677|ref|YP_565369.1| - 5.2e-05 23.8 0.7 0.00014 22.4 0.7 1.7 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91772677|ref|YP_565369.1| - 0.00011 22.5 0.3 0.17 12.1 0.2 2.8 3 0 0 3 3 3 2 DDE domain BST2 PF16716.5 gi|91772677|ref|YP_565369.1| - 0.067 13.8 1.4 0.3 11.7 1.4 2.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Zn_Tnp_IS1595 PF12760.7 gi|91772677|ref|YP_565369.1| - 0.14 12.2 2.7 0.83 9.7 0.8 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF16 PF01519.16 gi|91772677|ref|YP_565369.1| - 0.14 12.7 2.6 0.55 10.7 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF16 Lar_restr_allev PF14354.6 gi|91772677|ref|YP_565369.1| - 0.36 11.2 6.9 0.52 10.7 4.5 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91772677|ref|YP_565369.1| - 1 10.1 8.9 7.1 7.4 1.5 3.6 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PLATZ PF04640.14 gi|91772677|ref|YP_565369.1| - 2.1 9.0 6.0 0.65 10.7 1.1 2.7 2 1 0 2 2 2 0 PLATZ transcription factor Oxidored_molyb PF00174.19 gi|91772679|ref|YP_565371.1| - 5.1e-36 123.9 0.0 8.5e-36 123.2 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain 4HB_MCP_1 PF12729.7 gi|91772679|ref|YP_565371.1| - 0.031 13.8 0.9 0.055 13.0 0.9 1.3 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction Methyltransf_11 PF08241.12 gi|91772680|ref|YP_565372.1| - 1.8e-12 47.7 0.0 2.6e-12 47.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|91772680|ref|YP_565372.1| - 4.1e-10 39.4 0.0 4.7e-10 39.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 gi|91772680|ref|YP_565372.1| - 9.1e-08 32.7 0.0 1.4e-07 32.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91772680|ref|YP_565372.1| - 4.6e-07 29.8 0.0 4.6e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91772680|ref|YP_565372.1| - 3.1e-06 27.1 0.0 3.3e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91772680|ref|YP_565372.1| - 0.00018 22.2 0.0 0.00029 21.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain HTH_45 PF14947.6 gi|91772681|ref|YP_565373.1| - 0.0063 16.5 0.0 0.008 16.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_20 PF12840.7 gi|91772681|ref|YP_565373.1| - 0.096 12.8 0.0 0.5 10.5 0.0 2.0 1 1 0 1 1 1 0 Helix-turn-helix domain MCH PF02289.16 gi|91772682|ref|YP_565374.1| - 1.8e-133 444.7 0.0 2e-133 444.5 0.0 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) HTH_54 PF18607.1 gi|91772682|ref|YP_565374.1| - 0.078 13.0 0.0 1.3 9.1 0.0 2.3 2 0 0 2 2 2 0 ParA helix turn helix domain DUF2124 PF09897.9 gi|91772683|ref|YP_565375.1| - 9.2e-53 177.9 0.2 1e-52 177.7 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) Met_10 PF02475.16 gi|91772684|ref|YP_565376.1| - 6.2e-64 215.4 0.0 9e-64 214.9 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|91772684|ref|YP_565376.1| - 0.019 14.8 0.0 0.044 13.7 0.0 1.7 1 0 0 1 1 1 0 tRNA methyltransferase 5 N-terminal domain Methyltransf_15 PF09445.10 gi|91772684|ref|YP_565376.1| - 0.041 13.5 0.0 0.073 12.6 0.0 1.5 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_18 PF12847.7 gi|91772684|ref|YP_565376.1| - 0.12 12.3 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|91772684|ref|YP_565376.1| - 0.19 11.4 0.0 0.9 9.2 0.0 1.9 2 0 0 2 2 2 0 Conserved hypothetical protein 95 V4R PF02830.18 gi|91772685|ref|YP_565377.1| - 8.5e-14 51.3 0.7 1.8e-13 50.3 0.6 1.6 2 0 0 2 2 2 1 V4R domain HTH_5 PF01022.20 gi|91772685|ref|YP_565377.1| - 4.5e-10 39.2 0.0 7.5e-10 38.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|91772685|ref|YP_565377.1| - 0.00034 20.5 0.0 0.00052 19.8 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|91772685|ref|YP_565377.1| - 0.015 15.2 0.1 0.028 14.3 0.1 1.5 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 gi|91772685|ref|YP_565377.1| - 0.017 15.1 0.0 0.029 14.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|91772685|ref|YP_565377.1| - 0.02 14.7 0.0 0.033 14.0 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain TRAPP PF04051.16 gi|91772685|ref|YP_565377.1| - 0.049 13.3 0.2 6.4 6.5 0.1 2.2 1 1 1 2 2 2 0 Transport protein particle (TRAPP) component HTH_34 PF13601.6 gi|91772685|ref|YP_565377.1| - 0.051 13.8 0.0 0.077 13.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_40 PF14493.6 gi|91772685|ref|YP_565377.1| - 0.051 14.0 0.1 0.098 13.1 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|91772685|ref|YP_565377.1| - 0.14 12.6 0.1 0.28 11.7 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2110 PF09883.9 gi|91772686|ref|YP_565378.1| - 1.1e-84 283.5 0.0 1.3e-84 283.3 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2110) HTH_27 PF13463.6 gi|91772687|ref|YP_565379.1| - 0.00012 22.4 0.0 0.00047 20.6 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|91772687|ref|YP_565379.1| - 0.00095 19.0 0.4 0.0026 17.6 0.1 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4364) MarR PF01047.22 gi|91772687|ref|YP_565379.1| - 0.0049 16.8 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.6 gi|91772687|ref|YP_565379.1| - 0.0061 16.5 0.1 0.011 15.6 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DUF2250 PF10007.9 gi|91772687|ref|YP_565379.1| - 0.11 12.6 0.0 0.3 11.2 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) TRM PF02005.16 gi|91772688|ref|YP_565380.1| - 4.7e-105 351.8 0.0 5.6e-105 351.6 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase zf-ribbon_3 PF13248.6 gi|91772688|ref|YP_565380.1| - 2.7 7.5 5.3 14 5.2 0.1 3.0 3 0 0 3 3 3 0 zinc-ribbon domain Cupredoxin_1 PF13473.6 gi|91772689|ref|YP_565381.1| - 0.0034 17.5 0.0 0.0046 17.1 0.0 1.2 1 0 0 1 1 1 1 Cupredoxin-like domain Cupin_2 PF07883.11 gi|91772690|ref|YP_565382.1| - 8.8e-14 51.0 0.1 1.5e-13 50.2 0.1 1.4 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.22 gi|91772690|ref|YP_565382.1| - 3.9e-08 33.2 0.1 5.2e-08 32.8 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|91772690|ref|YP_565382.1| - 1.5e-07 31.4 0.1 2.3e-07 30.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|91772690|ref|YP_565382.1| - 3.9e-07 30.3 0.0 5.6e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|91772690|ref|YP_565382.1| - 9e-07 29.2 0.0 1.3e-06 28.7 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 gi|91772690|ref|YP_565382.1| - 0.00096 19.0 0.5 0.0017 18.2 0.5 1.4 1 1 0 1 1 1 1 Helix-turn-helix domain Cupin_3 PF05899.12 gi|91772690|ref|YP_565382.1| - 0.0013 18.4 0.0 0.0024 17.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 gi|91772690|ref|YP_565382.1| - 0.0037 17.2 0.1 0.0058 16.5 0.1 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain 4HBT PF03061.22 gi|91772691|ref|YP_565383.1| - 4.4e-08 33.4 0.0 7.1e-08 32.7 0.0 1.4 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|91772691|ref|YP_565383.1| - 2.3e-07 31.3 0.0 2.8e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|91772691|ref|YP_565383.1| - 0.00047 19.5 0.0 0.0083 15.4 0.0 2.0 2 0 0 2 2 2 1 Acyl-ACP thioesterase AMP-binding PF00501.28 gi|91772692|ref|YP_565384.1| - 1e-112 376.9 0.0 1.2e-112 376.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|91772692|ref|YP_565384.1| - 4.7e-18 65.9 0.0 9.1e-18 65.0 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Nup35_RRM PF05172.13 gi|91772692|ref|YP_565384.1| - 0.058 13.4 0.0 15 5.6 0.0 2.5 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif DDE_Tnp_ISL3 PF01610.17 gi|91772693|ref|YP_565385.1| - 1.3e-70 237.8 4.3 2.3e-70 237.0 4.3 1.3 1 0 0 1 1 1 1 Transposase HTH_Tnp_ISL3 PF13542.6 gi|91772693|ref|YP_565385.1| - 2.4e-14 52.5 0.1 4.1e-14 51.7 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 zf-ISL3 PF14690.6 gi|91772693|ref|YP_565385.1| - 5.6e-11 42.9 1.3 1.5e-10 41.6 1.3 1.8 1 0 0 1 1 1 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 UPF0236 PF06782.11 gi|91772693|ref|YP_565385.1| - 0.0011 17.7 0.3 0.0026 16.5 0.2 1.6 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0236) HTH_23 PF13384.6 gi|91772693|ref|YP_565385.1| - 0.0042 16.8 0.0 0.024 14.4 0.0 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.6 gi|91772693|ref|YP_565385.1| - 0.056 13.5 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix DUF3160 PF11369.8 gi|91772694|ref|YP_565386.1| - 1.4e-245 816.7 0.1 1.5e-245 816.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) Med9 PF07544.13 gi|91772694|ref|YP_565386.1| - 0.06 13.5 0.3 6.9 6.8 0.4 2.6 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 NosD PF05048.13 gi|91772696|ref|YP_565388.1| - 3.8e-45 154.0 79.7 2.2e-19 69.7 30.9 3.1 1 1 2 3 3 3 3 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|91772696|ref|YP_565388.1| - 9.7e-41 139.2 112.0 4.3e-19 68.9 36.4 3.1 1 1 2 3 3 3 3 Right handed beta helix region Pectate_lyase_3 PF12708.7 gi|91772696|ref|YP_565388.1| - 1.2e-05 25.3 48.2 0.0087 15.9 9.1 3.2 2 1 1 3 3 3 3 Pectate lyase superfamily protein DUF1160 PF06648.11 gi|91772696|ref|YP_565388.1| - 0.0035 17.3 0.5 0.0089 16.0 0.5 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1160) Gly-zipper_YMGG PF13441.6 gi|91772697|ref|YP_565389.1| - 0.002 17.9 0.9 0.11 12.2 0.2 2.1 2 0 0 2 2 2 2 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 gi|91772697|ref|YP_565389.1| - 0.0025 17.8 1.6 0.046 13.7 0.1 2.1 2 0 0 2 2 2 1 Glycine zipper DUF1269 PF06897.12 gi|91772697|ref|YP_565389.1| - 0.082 13.2 0.9 0.26 11.6 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) Gly-zipper_OmpA PF13436.6 gi|91772697|ref|YP_565389.1| - 0.65 9.8 5.1 1.6 8.6 0.9 2.1 2 0 0 2 2 2 0 Glycine-zipper domain PLDc_N PF13396.6 gi|91772698|ref|YP_565390.1| - 1e-09 38.2 0.8 1e-09 38.2 0.8 3.5 4 1 0 4 4 4 1 Phospholipase_D-nuclease N-terminal DUF2516 PF10724.9 gi|91772698|ref|YP_565390.1| - 0.015 15.6 15.6 0.12 12.6 13.0 3.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2516) Abhydrolase_9_N PF15420.6 gi|91772698|ref|YP_565390.1| - 0.11 12.4 4.8 0.054 13.5 1.9 2.0 2 1 0 2 2 2 0 Alpha/beta-hydrolase family N-terminus Chordopox_A13L PF05961.11 gi|91772698|ref|YP_565390.1| - 6 7.2 6.5 13 6.1 0.6 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein DUF4381 PF14316.6 gi|91772698|ref|YP_565390.1| - 7.5 6.8 5.4 47 4.2 0.1 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4381) ETRAMP PF09716.10 gi|91772698|ref|YP_565390.1| - 9.4 6.4 12.2 3.7 7.7 0.3 3.8 3 1 1 4 4 4 0 Malarial early transcribed membrane protein (ETRAMP) DUF916 PF06030.12 gi|91772700|ref|YP_565392.1| - 1.1e-06 28.8 2.7 0.12 12.4 0.1 4.5 4 1 1 5 5 5 2 Bacterial protein of unknown function (DUF916) NPCBM_assoc PF10633.9 gi|91772700|ref|YP_565392.1| - 1.7e-06 28.1 1.0 0.079 13.2 0.2 3.9 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase fn3_5 PF06280.12 gi|91772700|ref|YP_565392.1| - 3.8e-05 24.4 1.4 0.55 10.9 0.3 3.7 2 2 1 3 3 3 3 Fn3-like domain Motile_Sperm PF00635.26 gi|91772700|ref|YP_565392.1| - 0.00077 19.3 0.6 0.12 12.2 0.0 2.9 2 1 0 2 2 2 1 MSP (Major sperm protein) domain DUF4625 PF15418.6 gi|91772700|ref|YP_565392.1| - 0.00083 19.6 0.7 0.016 15.4 0.1 2.7 2 1 0 2 2 2 1 Domain of unknown function (DUF4625) PapD_N PF00345.20 gi|91772700|ref|YP_565392.1| - 0.12 12.3 0.6 0.74 9.7 0.5 2.1 2 0 0 2 2 2 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain DUF1775 PF07987.11 gi|91772700|ref|YP_565392.1| - 0.12 12.6 0.9 0.5 10.6 0.2 2.1 2 0 0 2 2 2 0 Domain of unkown function (DUF1775) CtaG_Cox11 PF04442.14 gi|91772700|ref|YP_565392.1| - 0.17 11.9 0.1 0.42 10.6 0.1 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 DUF4097 PF13349.6 gi|91772700|ref|YP_565392.1| - 0.27 10.5 2.0 4.4 6.6 0.1 2.5 2 1 0 2 2 2 0 Putative adhesin HEAT_2 PF13646.6 gi|91772701|ref|YP_565393.1| - 4.8e-54 180.7 11.5 9.5e-17 61.2 0.1 4.1 1 1 3 4 4 4 4 HEAT repeats HEAT_PBS PF03130.16 gi|91772701|ref|YP_565393.1| - 1.4e-49 161.7 4.4 2e-07 31.0 0.1 8.4 8 0 0 8 8 8 8 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|91772701|ref|YP_565393.1| - 1.8e-23 80.6 3.0 0.44 10.9 0.0 8.9 9 0 0 9 9 9 8 HEAT repeat HEAT_EZ PF13513.6 gi|91772701|ref|YP_565393.1| - 5.2e-15 55.6 9.1 0.36 11.4 0.2 8.0 5 2 3 8 8 8 5 HEAT-like repeat Arm PF00514.23 gi|91772701|ref|YP_565393.1| - 1.3e-11 44.1 0.0 0.012 15.6 0.0 7.2 6 2 2 8 8 8 2 Armadillo/beta-catenin-like repeat Vitellogenin_N PF01347.22 gi|91772701|ref|YP_565393.1| - 1.1e-05 24.1 0.1 0.091 11.1 0.0 3.0 1 1 2 3 3 3 2 Lipoprotein amino terminal region Cnd1 PF12717.7 gi|91772701|ref|YP_565393.1| - 2.6e-05 24.3 1.8 0.43 10.6 0.0 4.8 1 1 4 5 5 5 2 non-SMC mitotic condensation complex subunit 1 Aconitase_B_N PF11791.8 gi|91772701|ref|YP_565393.1| - 0.00011 22.3 0.1 0.055 13.5 0.0 3.5 3 1 2 5 5 5 1 Aconitate B N-terminal domain ERAP1_C PF11838.8 gi|91772701|ref|YP_565393.1| - 0.001 18.7 0.1 0.053 13.1 0.0 2.5 1 1 2 3 3 3 1 ERAP1-like C-terminal domain RICTOR_V PF14668.6 gi|91772701|ref|YP_565393.1| - 0.011 15.9 0.0 16 5.9 0.0 4.3 1 1 3 4 4 4 0 Rapamycin-insensitive companion of mTOR, domain 5 Adaptin_N PF01602.20 gi|91772701|ref|YP_565393.1| - 0.013 14.1 0.2 1.3 7.5 0.0 3.4 1 1 3 4 4 4 0 Adaptin N terminal region UPF0147 PF03685.13 gi|91772701|ref|YP_565393.1| - 0.018 15.1 2.7 16 5.7 0.0 4.1 3 3 1 4 4 4 0 Uncharacterised protein family (UPF0147) UPF0253 PF06786.12 gi|91772701|ref|YP_565393.1| - 0.034 14.4 1.8 55 4.1 0.0 5.3 6 0 0 6 6 6 0 Uncharacterised protein family (UPF0253) UPF0228 PF05727.11 gi|91772702|ref|YP_565394.1| - 4.5e-47 158.9 0.5 4.5e-47 158.9 0.5 1.6 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0228) Herpes_capsid PF06112.11 gi|91772702|ref|YP_565394.1| - 0.083 13.0 3.7 0.16 12.0 3.7 1.3 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Hit1_C PF18268.1 gi|91772703|ref|YP_565395.1| - 0.0086 16.2 0.3 0.013 15.6 0.3 1.3 1 0 0 1 1 1 1 Hit1 C-terminal Mg296 PF09644.10 gi|91772703|ref|YP_565395.1| - 0.058 13.5 0.9 0.091 12.9 0.8 1.4 1 1 0 1 1 1 0 Mg296 protein TPP_enzyme_N PF02776.18 gi|91772704|ref|YP_565396.1| - 3.2e-49 166.9 0.0 8.7e-49 165.4 0.0 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|91772704|ref|YP_565396.1| - 6.5e-38 129.9 0.1 9.4e-37 126.2 0.1 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|91772704|ref|YP_565396.1| - 9e-28 96.7 0.0 2.4e-27 95.3 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain Lactamase_B_2 PF12706.7 gi|91772705|ref|YP_565397.1| - 4.1e-22 78.7 0.0 5e-22 78.4 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|91772705|ref|YP_565397.1| - 2.9e-11 43.7 0.6 8.8e-11 42.2 0.3 2.0 1 1 1 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|91772705|ref|YP_565397.1| - 0.0033 17.3 0.1 0.01 15.8 0.1 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Metallophos_2 PF12850.7 gi|91772706|ref|YP_565398.1| - 1.9e-16 60.7 0.0 3.3e-16 59.9 0.0 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|91772706|ref|YP_565398.1| - 7.8e-16 59.2 0.0 1.3e-15 58.5 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|91772706|ref|YP_565398.1| - 1e-12 47.9 0.7 7.6e-08 32.0 0.0 2.7 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily AIM24 PF01987.17 gi|91772707|ref|YP_565399.1| - 8.3e-70 234.7 0.7 9.6e-70 234.5 0.7 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 META PF03724.16 gi|91772708|ref|YP_565400.1| - 8.4e-16 57.9 0.0 9.6e-16 57.7 0.0 1.0 1 0 0 1 1 1 1 META domain Zn_protease PF05618.11 gi|91772709|ref|YP_565401.1| - 5.2e-35 120.3 0.0 5.9e-35 120.1 0.0 1.0 1 0 0 1 1 1 1 Putative ATP-dependant zinc protease RimK PF08443.11 gi|91772710|ref|YP_565402.1| - 3.1e-68 229.1 0.1 4.2e-68 228.7 0.1 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain Rimk_N PF18030.1 gi|91772710|ref|YP_565402.1| - 7.3e-44 148.1 0.1 1.3e-43 147.3 0.1 1.4 1 0 0 1 1 1 1 RimK PreATP-grasp domain GSH-S_ATP PF02955.16 gi|91772710|ref|YP_565402.1| - 4.1e-18 65.4 0.4 6.7e-18 64.7 0.4 1.3 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 gi|91772710|ref|YP_565402.1| - 2.7e-09 37.3 0.1 4.4e-09 36.6 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|91772710|ref|YP_565402.1| - 2.9e-07 30.0 0.2 0.0043 16.3 0.0 2.6 1 1 1 2 2 2 2 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 gi|91772710|ref|YP_565402.1| - 0.00023 20.8 0.4 0.0019 17.8 0.4 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_YheCD PF14398.6 gi|91772710|ref|YP_565402.1| - 0.0011 18.3 0.0 0.052 12.8 0.0 2.8 1 1 2 3 3 3 1 YheC/D like ATP-grasp ATP-grasp_2 PF08442.10 gi|91772710|ref|YP_565402.1| - 0.035 13.6 0.2 0.065 12.8 0.2 1.4 1 0 0 1 1 1 0 ATP-grasp domain GARS_A PF01071.19 gi|91772710|ref|YP_565402.1| - 0.06 13.1 0.1 0.1 12.4 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain R2K_3 PF14243.6 gi|91772710|ref|YP_565402.1| - 0.11 12.5 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 TTL PF03133.15 gi|91772710|ref|YP_565402.1| - 0.16 11.1 0.0 3.5 6.7 0.0 2.3 2 0 0 2 2 2 0 Tubulin-tyrosine ligase family AstE_AspA PF04952.14 gi|91772711|ref|YP_565403.1| - 1.8e-50 171.7 0.0 2e-50 171.5 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family DUF2817 PF10994.8 gi|91772711|ref|YP_565403.1| - 0.013 14.9 0.0 3 7.1 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2817) Peptidase_M99 PF17033.5 gi|91772711|ref|YP_565403.1| - 0.015 14.7 0.0 0.022 14.2 0.0 1.2 1 0 0 1 1 1 0 Carboxypeptidase controlling helical cell shape catalytic DUF21 PF01595.20 gi|91772712|ref|YP_565404.1| - 8e-37 126.6 1.0 1.1e-36 126.2 1.0 1.1 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain DDE_Tnp_1 PF01609.21 gi|91772713|ref|YP_565405.1| - 0.018 14.7 4.1 0.019 14.6 4.1 1.0 1 0 0 1 1 1 0 Transposase DDE domain RVT_1 PF00078.27 gi|91772714|ref|YP_565406.1| - 1.4e-42 145.7 0.1 3.1e-42 144.6 0.0 1.5 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_N PF13655.6 gi|91772714|ref|YP_565406.1| - 7.4e-28 96.6 2.2 7.4e-28 96.6 2.2 1.9 2 0 0 2 2 2 1 N-terminal domain of reverse transcriptase GIIM PF08388.11 gi|91772714|ref|YP_565406.1| - 3.4e-24 84.7 6.4 8.9e-24 83.4 6.4 1.8 1 0 0 1 1 1 1 Group II intron, maturase-specific domain Intron_maturas2 PF01348.21 gi|91772714|ref|YP_565406.1| - 0.011 15.7 3.7 0.13 12.2 0.5 3.8 3 1 0 3 3 3 0 Type II intron maturase HNH PF01844.23 gi|91772714|ref|YP_565406.1| - 0.12 12.6 3.4 0.25 11.6 3.4 1.6 1 0 0 1 1 1 0 HNH endonuclease AtpR PF12966.7 gi|91772715|ref|YP_565407.1| - 0.18 12.3 0.4 0.18 12.3 0.4 3.2 3 1 0 3 3 3 0 N-ATPase, AtpR subunit DUF2238 PF09997.9 gi|91772715|ref|YP_565407.1| - 0.23 11.3 10.9 1.2 8.9 10.5 2.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2238) DUF3887 PF13026.6 gi|91772716|ref|YP_565408.1| - 1.2e-10 42.1 0.3 1.5e-10 41.7 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3887) DUF4019 PF13211.6 gi|91772716|ref|YP_565408.1| - 0.0049 17.2 0.0 0.011 16.2 0.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF4019) DUF1510 PF07423.11 gi|91772716|ref|YP_565408.1| - 0.016 15.3 0.1 0.023 14.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1510) YpjP PF14005.6 gi|91772716|ref|YP_565408.1| - 0.025 14.6 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 YpjP-like protein DUF2745 PF10922.8 gi|91772716|ref|YP_565408.1| - 0.12 12.7 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2745) DUF4969 PF16339.5 gi|91772716|ref|YP_565408.1| - 0.15 12.4 0.9 0.25 11.7 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4969) Chordopox_G3 PF06129.12 gi|91772716|ref|YP_565408.1| - 0.15 12.7 0.1 0.15 12.7 0.1 1.4 2 0 0 2 2 2 0 Chordopoxvirus G3 protein HATPase_c PF02518.26 gi|91772717|ref|YP_565409.1| - 1.5e-28 99.5 0.4 1.5e-28 99.5 0.4 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase dCache_1 PF02743.18 gi|91772717|ref|YP_565409.1| - 1.7e-21 77.1 6.1 3.7e-21 76.0 5.9 1.6 2 0 0 2 2 2 1 Cache domain HisKA PF00512.25 gi|91772717|ref|YP_565409.1| - 8.5e-18 64.2 2.1 2.5e-17 62.7 0.2 2.6 2 1 1 3 3 3 1 His Kinase A (phospho-acceptor) domain CHASE PF03924.13 gi|91772717|ref|YP_565409.1| - 1.6e-05 24.9 0.0 2.7e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 CHASE domain HATPase_c_5 PF14501.6 gi|91772717|ref|YP_565409.1| - 0.00035 20.4 0.2 0.0016 18.3 0.1 2.3 2 0 0 2 2 2 1 GHKL domain HATPase_c_3 PF13589.6 gi|91772717|ref|YP_565409.1| - 0.0041 17.0 0.1 0.011 15.6 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|91772717|ref|YP_565409.1| - 0.03 14.3 0.0 0.06 13.3 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain SieB PF14163.6 gi|91772717|ref|YP_565409.1| - 0.11 12.0 1.8 0.18 11.3 0.3 2.1 2 0 0 2 2 2 0 Super-infection exclusion protein B Rx_N PF18052.1 gi|91772717|ref|YP_565409.1| - 0.24 11.7 3.8 1.8 8.9 1.3 2.3 1 1 1 2 2 2 0 Rx N-terminal domain Response_reg PF00072.24 gi|91772718|ref|YP_565410.1| - 7.1e-33 113.1 0.6 9.5e-33 112.7 0.6 1.2 1 0 0 1 1 1 1 Response regulator receiver domain HTH_11 PF08279.12 gi|91772718|ref|YP_565410.1| - 2.4e-07 30.6 0.2 6.6e-07 29.2 0.2 1.8 1 1 1 2 2 2 1 HTH domain MarR PF01047.22 gi|91772718|ref|YP_565410.1| - 0.00037 20.4 0.1 0.00075 19.4 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|91772718|ref|YP_565410.1| - 0.0014 18.2 0.6 0.0029 17.1 0.3 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|91772718|ref|YP_565410.1| - 0.0094 15.8 1.3 0.012 15.4 0.1 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain NIF PF03031.18 gi|91772718|ref|YP_565410.1| - 0.044 13.5 0.0 0.058 13.2 0.0 1.2 1 0 0 1 1 1 0 NLI interacting factor-like phosphatase MarR_2 PF12802.7 gi|91772718|ref|YP_565410.1| - 0.053 13.4 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 MarR family MarR_2 PF12802.7 gi|91772719|ref|YP_565411.1| - 0.00028 20.7 0.0 0.00037 20.3 0.0 1.2 1 0 0 1 1 1 1 MarR family RuvB_C PF05491.13 gi|91772719|ref|YP_565411.1| - 0.0031 17.4 0.1 0.0042 16.9 0.1 1.2 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain HTH_9 PF08221.11 gi|91772719|ref|YP_565411.1| - 0.0068 16.5 0.1 0.013 15.6 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_24 PF13412.6 gi|91772719|ref|YP_565411.1| - 0.0078 15.7 0.1 0.017 14.7 0.1 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|91772719|ref|YP_565411.1| - 0.017 15.5 0.1 0.023 15.0 0.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_11 PF08279.12 gi|91772719|ref|YP_565411.1| - 0.018 15.0 0.2 0.027 14.4 0.2 1.3 1 0 0 1 1 1 0 HTH domain HTH_IclR PF09339.10 gi|91772719|ref|YP_565411.1| - 0.021 14.6 0.0 0.03 14.1 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain TrmB PF01978.19 gi|91772719|ref|YP_565411.1| - 0.031 14.1 0.0 0.042 13.7 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB TBPIP PF07106.13 gi|91772719|ref|YP_565411.1| - 0.044 13.7 0.1 0.61 10.1 0.0 2.1 2 0 0 2 2 2 0 TBPIP/Hop2 winged helix domain MarR PF01047.22 gi|91772719|ref|YP_565411.1| - 0.045 13.7 0.1 0.072 13.0 0.1 1.3 1 0 0 1 1 1 0 MarR family HTH_46 PF15977.5 gi|91772719|ref|YP_565411.1| - 0.064 13.3 0.1 0.11 12.6 0.1 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix DNA binding HTH_35 PF13693.6 gi|91772719|ref|YP_565411.1| - 0.16 12.0 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sensor PF13796.6 gi|91772720|ref|YP_565412.1| - 2e-41 141.7 12.9 2.5e-41 141.4 12.9 1.1 1 0 0 1 1 1 1 Putative sensor PgpA PF04608.13 gi|91772720|ref|YP_565412.1| - 1.2 9.1 8.4 0.1 12.6 1.9 2.0 2 0 0 2 2 2 0 Phosphatidylglycerophosphatase A DUF5392 PF17370.2 gi|91772720|ref|YP_565412.1| - 4.8 7.3 6.7 0.75 9.9 1.0 2.3 2 1 0 2 2 2 0 Family of unknown function (DUF5392) PLDc_N PF13396.6 gi|91772721|ref|YP_565413.1| - 2.4e-13 49.8 2.9 2.4e-13 49.8 2.9 1.7 2 0 0 2 2 2 1 Phospholipase_D-nuclease N-terminal DUF1496 PF07383.12 gi|91772721|ref|YP_565413.1| - 0.04 13.5 0.1 0.053 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1496) MacB_PCD PF12704.7 gi|91772722|ref|YP_565414.1| - 2.7e-25 89.9 3.0 2.7e-25 89.9 3.0 1.8 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|91772722|ref|YP_565414.1| - 3.5e-13 49.8 4.2 3.5e-13 49.8 4.2 3.0 3 0 0 3 3 3 1 FtsX-like permease family NPCBM_assoc PF10633.9 gi|91772723|ref|YP_565415.1| - 0.0029 17.8 0.2 0.07 13.4 0.0 3.0 2 0 0 2 2 2 1 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|91772723|ref|YP_565415.1| - 0.0045 17.3 1.5 0.022 15.0 1.3 2.2 2 0 0 2 2 2 1 Domain of unknown function DUF11 Wzt_C PF14524.6 gi|91772723|ref|YP_565415.1| - 0.015 15.3 0.4 0.38 10.8 0.0 2.5 1 1 1 2 2 2 0 Wzt C-terminal domain ETRAMP PF09716.10 gi|91772723|ref|YP_565415.1| - 0.085 12.9 0.0 0.48 10.5 0.0 2.0 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) NVEALA PF14055.6 gi|91772723|ref|YP_565415.1| - 0.81 9.7 2.7 3.1 7.8 0.1 2.3 2 0 0 2 2 2 0 NVEALA protein ABC_tran PF00005.27 gi|91772724|ref|YP_565416.1| - 2.7e-33 115.4 0.1 3.8e-33 114.9 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91772724|ref|YP_565416.1| - 6.8e-09 35.9 0.6 0.00011 22.2 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91772724|ref|YP_565416.1| - 1.4e-07 31.2 0.1 4.2e-07 29.6 0.1 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91772724|ref|YP_565416.1| - 6.9e-05 22.5 0.3 0.00032 20.4 0.1 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|91772724|ref|YP_565416.1| - 0.00011 22.2 0.1 0.00018 21.5 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|91772724|ref|YP_565416.1| - 0.0021 18.4 0.1 0.0033 17.7 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|91772724|ref|YP_565416.1| - 0.0023 18.3 0.0 0.0034 17.8 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|91772724|ref|YP_565416.1| - 0.0033 18.0 0.1 0.007 16.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|91772724|ref|YP_565416.1| - 0.0084 15.9 0.0 0.067 12.9 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein MMR_HSR1 PF01926.23 gi|91772724|ref|YP_565416.1| - 0.015 15.4 0.1 0.045 13.8 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 gi|91772724|ref|YP_565416.1| - 0.015 15.8 0.1 0.031 14.8 0.1 1.5 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|91772724|ref|YP_565416.1| - 0.018 15.2 0.0 0.046 13.8 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_24 PF13479.6 gi|91772724|ref|YP_565416.1| - 0.019 14.7 0.1 0.06 13.1 0.0 1.9 1 1 1 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|91772724|ref|YP_565416.1| - 0.048 13.4 0.0 0.53 9.9 0.0 2.1 1 1 1 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 gi|91772724|ref|YP_565416.1| - 0.059 13.1 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 gi|91772724|ref|YP_565416.1| - 0.069 12.3 0.0 0.085 12.0 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit T2SSE PF00437.20 gi|91772724|ref|YP_565416.1| - 0.071 12.2 0.1 0.19 10.7 0.0 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_25 PF13481.6 gi|91772724|ref|YP_565416.1| - 0.076 12.6 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 gi|91772724|ref|YP_565416.1| - 0.095 12.4 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 Cytidylate kinase AAA_28 PF13521.6 gi|91772724|ref|YP_565416.1| - 0.096 12.9 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 gi|91772724|ref|YP_565416.1| - 0.099 12.0 0.1 9 5.6 0.0 2.2 2 0 0 2 2 2 0 KaiC RNA_helicase PF00910.22 gi|91772724|ref|YP_565416.1| - 0.13 12.7 0.0 0.29 11.5 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Serpin PF00079.20 gi|91772725|ref|YP_565417.1| - 4.9e-118 394.6 5.0 5.7e-118 394.4 5.0 1.0 1 0 0 1 1 1 1 Serpin (serine protease inhibitor) DUF956 PF06115.11 gi|91772725|ref|YP_565417.1| - 0.036 13.8 0.0 0.14 11.8 0.0 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF956) ThiC_Rad_SAM PF01964.18 gi|91772726|ref|YP_565418.1| - 1.6e-186 620.2 0.6 1.8e-186 620.0 0.6 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family PALP PF00291.25 gi|91772726|ref|YP_565418.1| - 0.055 12.9 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme Usp PF00582.26 gi|91772727|ref|YP_565419.1| - 2.6e-33 115.5 0.0 3e-33 115.3 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Topoisom_bac PF01131.20 gi|91772728|ref|YP_565420.1| - 7.8e-106 354.5 0.0 9.9e-106 354.2 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase zf-C4_Topoisom PF01396.19 gi|91772728|ref|YP_565420.1| - 1.8e-11 43.6 19.1 1.2e-09 37.8 2.2 3.5 3 0 0 3 3 3 2 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.22 gi|91772728|ref|YP_565420.1| - 2.3e-09 37.4 0.1 2.8e-08 33.9 0.0 2.7 3 0 0 3 3 3 1 Toprim domain Auto_anti-p27 PF06677.12 gi|91772728|ref|YP_565420.1| - 0.094 12.9 1.7 0.33 11.1 0.1 2.5 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) NERD PF08378.11 gi|91772729|ref|YP_565421.1| - 1.7e-18 67.0 0.2 3.2e-18 66.2 0.2 1.5 1 0 0 1 1 1 1 Nuclease-related domain Blo-t-5 PF11642.8 gi|91772729|ref|YP_565421.1| - 0.18 11.8 1.5 0.38 10.7 1.5 1.6 1 0 0 1 1 1 0 Mite allergen Blo t 5 CAF1-p150_N PF15557.6 gi|91772729|ref|YP_565421.1| - 0.23 11.4 0.2 0.3 11.0 0.2 1.2 1 0 0 1 1 1 0 CAF1 complex subunit p150, region binding to PCNA Nitroreductase PF00881.24 gi|91772730|ref|YP_565422.1| - 4.7e-34 117.9 0.5 2.5e-19 70.0 0.0 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|91772730|ref|YP_565422.1| - 1.6e-20 73.6 0.7 5.7e-08 32.6 0.0 3.0 1 1 1 3 3 3 3 Putative TM nitroreductase Urate_ox_N PF06181.11 gi|91772730|ref|YP_565422.1| - 0.035 13.4 0.1 0.045 13.1 0.1 1.1 1 0 0 1 1 1 0 Urate oxidase N-terminal IlvN PF07991.12 gi|91772731|ref|YP_565423.1| - 1.9e-76 255.3 0.7 2.5e-76 254.9 0.7 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|91772731|ref|YP_565423.1| - 5.4e-61 205.1 0.4 7.8e-61 204.6 0.4 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.17 gi|91772731|ref|YP_565423.1| - 6.2e-06 26.7 0.1 1.3e-05 25.6 0.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|91772731|ref|YP_565423.1| - 7.1e-05 23.0 0.0 0.00013 22.2 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|91772731|ref|YP_565423.1| - 8.1e-05 22.0 0.0 0.00014 21.3 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|91772731|ref|YP_565423.1| - 0.00022 21.3 0.1 0.00042 20.4 0.1 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ApbA PF02558.16 gi|91772731|ref|YP_565423.1| - 0.026 14.2 0.0 0.049 13.3 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Mur_ligase PF01225.25 gi|91772731|ref|YP_565423.1| - 0.043 14.1 0.3 0.3 11.4 0.3 2.3 1 1 0 1 1 1 0 Mur ligase family, catalytic domain Oxidored_nitro PF00148.19 gi|91772731|ref|YP_565423.1| - 0.063 12.0 0.0 0.13 11.0 0.0 1.4 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase YfaZ PF07437.11 gi|91772731|ref|YP_565423.1| - 0.067 12.8 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 YfaZ precursor ALS_ss_C PF10369.9 gi|91772732|ref|YP_565424.1| - 5.5e-30 103.4 3.5 9.6e-30 102.6 1.2 2.0 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|91772732|ref|YP_565424.1| - 9.3e-19 67.0 0.7 3.6e-18 65.2 0.1 2.1 2 1 0 2 2 2 1 ACT domain ACT PF01842.25 gi|91772732|ref|YP_565424.1| - 8.1e-18 63.9 0.7 1.5e-17 63.1 0.1 1.7 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|91772732|ref|YP_565424.1| - 7.7e-07 29.6 0.3 7.7e-07 29.6 0.3 2.0 2 1 0 2 2 2 1 ACT domain Saccharop_dh_N PF04455.12 gi|91772732|ref|YP_565424.1| - 0.014 15.8 0.1 0.026 14.9 0.1 1.5 1 1 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region SLS PF14611.6 gi|91772732|ref|YP_565424.1| - 0.025 14.4 3.5 0.081 12.7 0.6 1.9 1 1 1 2 2 2 0 Mitochondrial inner-membrane-bound regulator NIL PF09383.10 gi|91772732|ref|YP_565424.1| - 0.032 14.1 0.4 1.1 9.1 0.0 2.7 2 1 1 3 3 3 0 NIL domain TPP_enzyme_N PF02776.18 gi|91772733|ref|YP_565425.1| - 2.8e-58 196.3 0.3 4.6e-56 189.1 0.1 2.4 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|91772733|ref|YP_565425.1| - 2.7e-55 186.4 0.3 5.9e-54 182.0 0.4 2.4 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|91772733|ref|YP_565425.1| - 5.6e-51 171.9 0.1 9.9e-51 171.1 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 gi|91772733|ref|YP_565425.1| - 0.0044 16.8 0.3 0.011 15.5 0.3 1.7 1 1 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HMGL-like PF00682.19 gi|91772734|ref|YP_565426.1| - 6.9e-78 261.8 1.2 1.3e-77 261.0 1.2 1.5 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|91772734|ref|YP_565426.1| - 6e-37 126.5 2.6 1.1e-36 125.6 2.6 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain DRTGG PF07085.12 gi|91772734|ref|YP_565426.1| - 0.17 11.7 1.6 0.52 10.1 0.2 2.4 3 0 0 3 3 3 0 DRTGG domain Peptidase_M42 PF05343.14 gi|91772735|ref|YP_565427.1| - 2.6e-113 377.9 2.8 3.1e-113 377.7 2.8 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|91772735|ref|YP_565427.1| - 3.5e-12 46.5 0.1 5.8e-12 45.8 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|91772735|ref|YP_565427.1| - 0.0002 21.1 0.1 0.034 13.8 0.0 2.5 2 1 0 2 2 2 2 Peptidase family M28 Aim19 PF10315.9 gi|91772737|ref|YP_565429.1| - 0.0052 17.1 0.4 0.01 16.2 0.4 1.5 1 0 0 1 1 1 1 Altered inheritance of mitochondria protein 19 MDH PF02315.16 gi|91772737|ref|YP_565429.1| - 0.021 14.9 0.0 0.032 14.3 0.0 1.3 1 0 0 1 1 1 0 Methanol dehydrogenase beta subunit Gram_pos_anchor PF00746.21 gi|91772737|ref|YP_565429.1| - 0.12 12.3 1.1 1.6 8.7 0.0 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif DUF2920 PF11144.8 gi|91772737|ref|YP_565429.1| - 0.22 10.7 0.0 0.26 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2920) DUF2749 PF10907.8 gi|91772737|ref|YP_565429.1| - 0.25 11.6 1.7 0.34 11.1 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) DUF1616 PF07760.11 gi|91772738|ref|YP_565430.1| - 1.1e-89 300.7 0.4 1.6e-89 300.2 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Saf_2TM PF18303.1 gi|91772738|ref|YP_565430.1| - 0.077 12.6 0.2 0.31 10.6 0.2 2.1 1 1 0 1 1 1 0 SAVED-fused 2TM effector domain Bax1-I PF01027.20 gi|91772738|ref|YP_565430.1| - 0.091 12.6 8.4 0.15 11.9 6.0 2.0 2 0 0 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 DUF4131 PF13567.6 gi|91772738|ref|YP_565430.1| - 0.22 11.1 1.9 15 5.2 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Peptidase_M48 PF01435.18 gi|91772739|ref|YP_565431.1| - 5.3e-12 45.9 0.0 8.1e-12 45.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 Exosortase_EpsH PF09721.10 gi|91772740|ref|YP_565432.1| - 8.3e-27 94.3 23.3 1.1e-26 93.9 23.3 1.1 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) FemAB PF02388.16 gi|91772742|ref|YP_565434.1| - 3.7e-11 42.5 1.5 1.4e-05 24.2 0.1 3.1 2 1 1 3 3 3 3 FemAB family Acetyltransf_6 PF13480.7 gi|91772742|ref|YP_565434.1| - 4.5e-05 23.6 0.0 6.8e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF354 PF04007.12 gi|91772743|ref|YP_565435.1| - 1.5e-13 50.6 0.1 1.8e-13 50.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_transf_4 PF13439.6 gi|91772743|ref|YP_565435.1| - 0.0025 17.8 0.0 0.004 17.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|91772743|ref|YP_565435.1| - 0.0034 17.4 0.1 0.011 15.7 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase 4-like Hexapep PF00132.24 gi|91772744|ref|YP_565436.1| - 2.5e-12 46.0 6.9 5.6e-09 35.4 3.5 4.0 4 0 0 4 4 4 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|91772744|ref|YP_565436.1| - 5.5e-07 29.2 8.5 2.9e-06 26.9 3.0 3.0 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Glycos_transf_2 PF00535.26 gi|91772745|ref|YP_565437.1| - 4.1e-11 43.0 0.1 2.3e-10 40.6 0.1 2.2 2 1 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|91772745|ref|YP_565437.1| - 4.5e-06 26.7 0.0 2.4e-05 24.3 0.0 1.9 1 1 1 2 2 2 1 Glycosyltransferase like family 2 PMT_2 PF13231.6 gi|91772746|ref|YP_565438.1| - 6.4e-05 23.2 19.0 6.4e-05 23.2 19.0 3.2 1 1 2 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Glycos_transf_1 PF00534.20 gi|91772747|ref|YP_565439.1| - 1.7e-24 86.3 0.1 3.4e-24 85.3 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|91772747|ref|YP_565439.1| - 8e-15 55.4 0.0 2e-14 54.2 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|91772747|ref|YP_565439.1| - 0.00092 19.3 0.0 0.0017 18.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|91772748|ref|YP_565440.1| - 5.4e-25 87.9 0.2 9e-25 87.2 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|91772748|ref|YP_565440.1| - 6e-20 72.0 0.1 9.8e-20 71.3 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|91772748|ref|YP_565440.1| - 2e-15 57.2 0.0 2.7e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|91772748|ref|YP_565440.1| - 4.3e-06 26.8 0.5 8.6e-06 25.8 0.5 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.6 gi|91772748|ref|YP_565440.1| - 0.1 13.0 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|91772749|ref|YP_565441.1| - 2.5e-42 144.3 0.0 5.1e-42 143.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|91772749|ref|YP_565441.1| - 1.8e-31 109.4 0.0 3.7e-31 108.3 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|91772749|ref|YP_565441.1| - 8.3e-21 74.7 0.0 5.1e-20 72.2 0.0 2.0 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|91772749|ref|YP_565441.1| - 1.2e-12 48.0 0.0 2.6e-12 46.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|91772749|ref|YP_565441.1| - 9.8e-08 32.6 0.0 4.9e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|91772749|ref|YP_565441.1| - 1.5e-07 31.5 2.4 1.8e-06 28.0 0.3 2.7 2 1 1 3 3 3 1 Glycosyl transferase 4-like Polysacc_synt PF01943.17 gi|91772750|ref|YP_565442.1| - 2.3e-34 119.1 34.9 2.3e-34 119.1 34.9 2.6 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|91772750|ref|YP_565442.1| - 5.8e-15 55.6 23.9 5.8e-15 55.6 23.9 4.9 2 1 3 5 5 5 2 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.6 gi|91772750|ref|YP_565442.1| - 9.1e-12 44.8 26.4 9.1e-12 44.8 26.4 2.0 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein MurJ PF03023.14 gi|91772750|ref|YP_565442.1| - 0.07 11.7 49.5 0.16 10.5 49.4 1.5 1 1 0 1 1 1 0 Lipid II flippase MurJ Big_9 PF17963.1 gi|91772751|ref|YP_565443.1| - 4.2e-07 30.6 6.7 4.2e-07 30.6 6.7 6.3 7 2 0 7 7 7 2 Bacterial Ig domain He_PIG PF05345.12 gi|91772751|ref|YP_565443.1| - 4.9e-07 29.8 1.2 4.9e-07 29.8 1.2 5.1 4 0 0 4 4 4 2 Putative Ig domain Dockerin_1 PF00404.18 gi|91772751|ref|YP_565443.1| - 7.4e-07 29.3 1.3 3.6e-06 27.1 1.3 2.3 1 0 0 1 1 1 1 Dockerin type I domain Cadherin_5 PF17892.1 gi|91772751|ref|YP_565443.1| - 6.7e-05 22.8 0.9 6.7e-05 22.8 0.9 6.2 5 3 1 6 6 6 1 Cadherin-like domain PKD PF00801.20 gi|91772751|ref|YP_565443.1| - 0.0028 17.5 1.0 0.0028 17.5 1.0 5.4 5 1 0 5 5 5 2 PKD domain PKD_3 PF16820.5 gi|91772751|ref|YP_565443.1| - 0.0086 15.8 6.8 0.79 9.5 0.1 5.0 5 0 0 5 5 5 1 PKD-like domain BiPBP_C PF06832.12 gi|91772751|ref|YP_565443.1| - 0.011 15.7 0.2 47 4.1 0.0 4.1 4 0 0 4 4 4 0 Penicillin-Binding Protein C-terminus Family DUF5011 PF16403.5 gi|91772751|ref|YP_565443.1| - 0.036 14.2 7.1 0.061 13.5 0.1 4.2 4 0 0 4 4 4 0 Domain of unknown function (DUF5011) Cohesin PF00963.18 gi|91772752|ref|YP_565444.1| - 8.6e-14 52.0 1.7 1.4e-13 51.3 1.4 1.5 1 1 0 1 1 1 1 Cohesin domain PspB PF06667.12 gi|91772753|ref|YP_565445.1| - 0.0012 18.9 0.0 0.0024 17.9 0.0 1.5 1 0 0 1 1 1 1 Phage shock protein B Tetraspanin PF00335.20 gi|91772753|ref|YP_565445.1| - 0.0097 15.6 1.4 0.015 15.0 1.4 1.3 1 1 0 1 1 1 1 Tetraspanin family Ndc1_Nup PF09531.10 gi|91772753|ref|YP_565445.1| - 0.011 14.4 0.9 0.013 14.2 0.9 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Trimer_CC PF08954.11 gi|91772753|ref|YP_565445.1| - 0.063 12.8 0.2 0.11 12.0 0.2 1.4 1 0 0 1 1 1 0 Trimerisation motif G3P_acyltransf PF02660.15 gi|91772753|ref|YP_565445.1| - 0.067 13.2 1.0 0.086 12.9 1.0 1.1 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase Tup_N PF08581.10 gi|91772753|ref|YP_565445.1| - 0.096 13.0 1.2 0.13 12.5 1.2 1.2 1 0 0 1 1 1 0 Tup N-terminal DUF2968 PF11180.8 gi|91772753|ref|YP_565445.1| - 0.17 11.5 1.6 0.23 11.1 1.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Metallophos PF00149.28 gi|91772754|ref|YP_565446.1| - 5.4e-06 27.0 0.6 7.5e-06 26.6 0.6 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|91772754|ref|YP_565446.1| - 0.00037 20.7 0.0 0.00056 20.1 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain RadC PF04002.15 gi|91772754|ref|YP_565446.1| - 0.1 12.6 0.2 1.3 9.0 0.1 2.2 2 0 0 2 2 2 0 RadC-like JAB domain Metallophos_3 PF14582.6 gi|91772754|ref|YP_565446.1| - 0.17 11.1 0.0 0.31 10.3 0.0 1.3 1 0 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily DEAD_assoc PF08494.11 gi|91772755|ref|YP_565447.1| - 3e-33 115.2 0.0 7.2e-33 114.0 0.0 1.7 2 0 0 2 2 2 1 DEAD/H associated DEAD PF00270.29 gi|91772755|ref|YP_565447.1| - 2.2e-30 105.7 0.0 5.2e-30 104.5 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|91772755|ref|YP_565447.1| - 1.3e-20 73.8 0.1 1e-19 70.9 0.0 2.5 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|91772755|ref|YP_565447.1| - 8.1e-08 32.4 0.0 1.5e-07 31.6 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 gi|91772755|ref|YP_565447.1| - 0.012 14.4 0.0 0.021 13.6 0.0 1.3 1 0 0 1 1 1 0 SNF2 family N-terminal domain ANAPC2 PF08672.11 gi|91772755|ref|YP_565447.1| - 0.025 15.1 0.0 0.078 13.5 0.0 1.8 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 T4SS-DNA_transf PF02534.14 gi|91772755|ref|YP_565447.1| - 0.051 12.4 0.0 0.098 11.4 0.0 1.3 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer AAA_25 PF13481.6 gi|91772755|ref|YP_565447.1| - 0.17 11.4 0.2 0.69 9.5 0.0 2.2 3 1 0 3 3 3 0 AAA domain Adenine_deam_C PF13382.6 gi|91772756|ref|YP_565448.1| - 2e-63 212.8 0.1 3.3e-63 212.0 0.1 1.4 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 gi|91772756|ref|YP_565448.1| - 2.1e-25 89.8 0.2 7.4e-24 84.7 0.2 2.3 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|91772756|ref|YP_565448.1| - 3.4e-09 36.7 0.7 0.00014 21.5 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family MR_MLE_N PF02746.16 gi|91772756|ref|YP_565448.1| - 0.0037 17.5 0.2 2.4 8.4 0.0 2.8 3 0 0 3 3 3 2 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Bac_rhamnosid6H PF17389.2 gi|91772757|ref|YP_565449.1| - 0.018 14.3 0.4 0.037 13.3 0.1 1.7 2 0 0 2 2 2 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glyco_hydro_15 PF00723.21 gi|91772757|ref|YP_565449.1| - 0.11 11.3 0.1 0.39 9.4 0.1 2.1 2 1 0 2 2 2 0 Glycosyl hydrolases family 15 Hydrolase_3 PF08282.12 gi|91772759|ref|YP_565451.1| - 1.2e-19 71.1 0.0 4e-19 69.4 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|91772759|ref|YP_565451.1| - 1.3e-06 28.2 0.0 0.0045 16.6 0.0 2.2 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.7 gi|91772759|ref|YP_565451.1| - 4.7e-06 27.1 2.0 0.0057 17.1 0.0 2.8 2 2 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|91772759|ref|YP_565451.1| - 1e-05 25.6 0.0 1.7e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|91772759|ref|YP_565451.1| - 0.0007 19.9 1.5 0.31 11.3 1.5 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|91772759|ref|YP_565451.1| - 0.0071 16.5 1.0 2 8.4 0.5 3.0 2 1 1 3 3 3 2 Haloacid dehalogenase-like hydrolase SufE PF02657.15 gi|91772760|ref|YP_565452.1| - 0.12 12.3 0.0 0.51 10.2 0.0 2.1 2 0 0 2 2 2 0 Fe-S metabolism associated domain DDE_Tnp_1 PF01609.21 gi|91772761|ref|YP_565453.1| - 4.5e-06 26.5 1.3 6.7e-06 25.9 1.3 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF4283 PF14111.6 gi|91772761|ref|YP_565453.1| - 0.05 13.1 0.1 0.11 12.0 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) DUF772 PF05598.11 gi|91772761|ref|YP_565453.1| - 0.062 13.3 0.0 0.22 11.6 0.0 2.0 2 1 0 2 2 2 0 Transposase domain (DUF772) FDX-ACB PF03147.14 gi|91772762|ref|YP_565454.1| - 0.048 14.1 0.2 0.19 12.2 0.1 2.0 2 1 0 2 2 2 0 Ferredoxin-fold anticodon binding domain TPR_14 PF13428.6 gi|91772763|ref|YP_565455.1| - 0.017 15.9 0.0 0.082 13.8 0.0 2.1 3 0 0 3 3 3 0 Tetratricopeptide repeat DDE_Tnp_IS66 PF03050.14 gi|91772764|ref|YP_565456.1| - 1.9e-67 227.7 0.4 6.3e-67 226.0 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91772764|ref|YP_565456.1| - 9e-11 42.0 3.8 2.7e-10 40.5 3.8 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 SlyX PF04102.12 gi|91772764|ref|YP_565456.1| - 5.2e-05 23.8 0.7 0.00014 22.4 0.7 1.7 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91772764|ref|YP_565456.1| - 0.00011 22.5 0.3 0.17 12.1 0.2 2.8 3 0 0 3 3 3 2 DDE domain BST2 PF16716.5 gi|91772764|ref|YP_565456.1| - 0.067 13.8 1.4 0.3 11.7 1.4 2.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Zn_Tnp_IS1595 PF12760.7 gi|91772764|ref|YP_565456.1| - 0.14 12.2 2.7 0.83 9.7 0.8 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF16 PF01519.16 gi|91772764|ref|YP_565456.1| - 0.14 12.7 2.6 0.55 10.7 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF16 Lar_restr_allev PF14354.6 gi|91772764|ref|YP_565456.1| - 0.36 11.2 6.9 0.52 10.7 4.5 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91772764|ref|YP_565456.1| - 1 10.1 8.9 7.1 7.4 1.5 3.6 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PLATZ PF04640.14 gi|91772764|ref|YP_565456.1| - 2.1 9.0 6.0 0.65 10.7 1.1 2.7 2 1 0 2 2 2 0 PLATZ transcription factor Asp2 PF16929.5 gi|91772765|ref|YP_565457.1| - 0.045 12.7 1.4 0.057 12.4 1.4 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter Maelstrom PF13017.6 gi|91772765|ref|YP_565457.1| - 0.13 12.0 0.6 0.15 11.7 0.6 1.0 1 0 0 1 1 1 0 piRNA pathway germ-plasm component CxxCxxCC PF03692.15 gi|91772766|ref|YP_565458.1| - 4.4e-09 36.9 2.5 9.4e-09 35.8 2.5 1.5 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain DUF4866 PF16160.5 gi|91772766|ref|YP_565458.1| - 0.062 12.6 0.1 1.5 8.1 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4866) DUF2650 PF10853.8 gi|91772766|ref|YP_565458.1| - 0.15 11.7 2.1 0.28 10.9 2.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) PhoU PF01895.19 gi|91772767|ref|YP_565459.1| - 5.7e-40 135.7 14.5 5.7e-22 78.0 4.9 2.1 2 0 0 2 2 2 2 PhoU domain HxlR PF01638.17 gi|91772767|ref|YP_565459.1| - 0.06 13.2 0.1 0.47 10.3 0.1 2.2 2 0 0 2 2 2 0 HxlR-like helix-turn-helix ABC_tran PF00005.27 gi|91772768|ref|YP_565460.1| - 1.7e-33 116.1 0.0 2.4e-33 115.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91772768|ref|YP_565460.1| - 4.8e-12 46.3 0.1 3.7e-05 23.7 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91772768|ref|YP_565460.1| - 3.7e-08 33.1 0.2 3.9e-06 26.5 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|91772768|ref|YP_565460.1| - 8.9e-06 25.6 0.0 3.6e-05 23.6 0.0 1.7 1 1 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|91772768|ref|YP_565460.1| - 0.00032 20.7 0.0 0.00063 19.7 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 gi|91772768|ref|YP_565460.1| - 0.0008 19.1 0.0 0.0017 18.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|91772768|ref|YP_565460.1| - 0.00087 19.8 0.0 0.0018 18.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|91772768|ref|YP_565460.1| - 0.001 19.4 0.0 0.0016 18.7 0.0 1.6 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|91772768|ref|YP_565460.1| - 0.0011 18.9 0.0 0.0024 17.8 0.0 1.5 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_16 PF13191.6 gi|91772768|ref|YP_565460.1| - 0.0032 17.9 0.0 0.005 17.3 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|91772768|ref|YP_565460.1| - 0.0043 16.7 0.0 0.012 15.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain PRK PF00485.18 gi|91772768|ref|YP_565460.1| - 0.02 14.6 0.0 0.045 13.5 0.0 1.6 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 gi|91772768|ref|YP_565460.1| - 0.023 15.2 0.0 0.047 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|91772768|ref|YP_565460.1| - 0.033 14.4 0.0 0.067 13.4 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|91772768|ref|YP_565460.1| - 0.068 13.6 0.0 0.58 10.6 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|91772768|ref|YP_565460.1| - 0.11 12.2 0.0 0.3 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain PPV_E1_C PF00519.17 gi|91772768|ref|YP_565460.1| - 0.2 10.4 0.0 0.35 9.6 0.0 1.3 1 0 0 1 1 1 0 Papillomavirus helicase BPD_transp_1 PF00528.22 gi|91772769|ref|YP_565461.1| - 2.9e-23 82.6 18.8 2.9e-23 82.6 18.8 2.7 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component FtsL PF04999.13 gi|91772769|ref|YP_565461.1| - 0.24 11.4 0.2 0.24 11.4 0.2 2.7 3 0 0 3 3 3 0 Cell division protein FtsL BPD_transp_1 PF00528.22 gi|91772770|ref|YP_565462.1| - 2.4e-22 79.6 14.5 2.4e-22 79.6 14.5 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1295 PF06966.12 gi|91772770|ref|YP_565462.1| - 0.2 11.2 1.2 0.34 10.4 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1295) PBP_like_2 PF12849.7 gi|91772771|ref|YP_565463.1| - 7e-45 153.9 0.9 1.1e-44 153.2 0.9 1.3 1 0 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|91772771|ref|YP_565463.1| - 7.4e-19 67.6 0.2 9.7e-19 67.2 0.2 1.1 1 0 0 1 1 1 1 PBP superfamily domain LysR_substrate PF03466.20 gi|91772771|ref|YP_565463.1| - 0.23 10.8 0.0 0.54 9.6 0.0 1.6 1 0 0 1 1 1 0 LysR substrate binding domain AAA_15 PF13175.6 gi|91772772|ref|YP_565464.1| - 7.4e-26 91.7 16.8 7.4e-26 91.7 16.8 3.1 2 2 0 2 2 2 1 AAA ATPase domain DUF2813 PF11398.8 gi|91772772|ref|YP_565464.1| - 3e-22 79.4 0.1 1.6e-11 44.1 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF2813) AAA_21 PF13304.6 gi|91772772|ref|YP_565464.1| - 1.9e-16 60.8 4.0 1.9e-16 60.8 4.0 2.2 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|91772772|ref|YP_565464.1| - 1.4e-08 35.5 3.9 1.4e-08 35.5 3.9 2.7 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|91772772|ref|YP_565464.1| - 6.3e-05 22.5 0.1 0.0011 18.4 0.0 2.5 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91772772|ref|YP_565464.1| - 0.0026 17.4 0.0 0.0059 16.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain p25-alpha PF05517.12 gi|91772772|ref|YP_565464.1| - 0.075 13.2 3.6 4.5 7.4 0.9 2.6 2 1 0 2 2 2 0 p25-alpha UvrD-helicase PF00580.21 gi|91772773|ref|YP_565465.1| - 1.7e-55 188.8 3.5 1.7e-55 188.8 3.5 2.2 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 gi|91772773|ref|YP_565465.1| - 2e-33 116.2 10.4 3e-21 76.2 1.0 2.5 2 1 1 3 3 3 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 gi|91772773|ref|YP_565465.1| - 2.1e-27 96.3 0.0 5.6e-27 94.9 0.0 1.8 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 gi|91772773|ref|YP_565465.1| - 2.3e-09 37.0 0.0 4.6e-09 36.0 0.0 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 gi|91772773|ref|YP_565465.1| - 2.9e-09 37.0 0.2 0.0019 18.0 0.0 3.4 3 0 0 3 3 3 3 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 gi|91772773|ref|YP_565465.1| - 2.9e-08 33.6 0.0 0.00029 20.6 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_12 PF13087.6 gi|91772773|ref|YP_565465.1| - 1e-06 28.5 1.6 0.0001 22.0 1.7 3.2 1 1 1 2 2 2 1 AAA domain PhoH PF02562.16 gi|91772773|ref|YP_565465.1| - 0.0003 20.3 0.1 0.29 10.5 0.0 3.2 3 0 0 3 3 3 1 PhoH-like protein AAA_11 PF13086.6 gi|91772773|ref|YP_565465.1| - 0.002 18.0 0.4 0.017 14.9 0.0 2.5 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|91772773|ref|YP_565465.1| - 0.0042 17.4 1.5 3.6 7.9 1.5 2.9 1 1 0 1 1 1 1 AAA domain P2 PF07194.11 gi|91772773|ref|YP_565465.1| - 0.054 13.5 2.4 1.3 9.1 0.1 3.4 3 0 0 3 3 3 0 P2 response regulator binding domain ResIII PF04851.15 gi|91772773|ref|YP_565465.1| - 0.089 12.8 9.6 0.018 15.0 2.3 3.3 3 1 0 3 3 3 0 Type III restriction enzyme, res subunit AAA_16 PF13191.6 gi|91772773|ref|YP_565465.1| - 0.11 12.8 0.3 1.7 9.0 0.3 2.5 1 1 0 1 1 1 0 AAA ATPase domain Gpr1_Fun34_YaaH PF01184.19 gi|91772774|ref|YP_565466.1| - 6e-42 143.6 19.6 8.2e-42 143.2 19.6 1.1 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DUF772 PF05598.11 gi|91772775|ref|YP_565467.1| - 9.1e-22 76.9 0.0 1.8e-21 75.9 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91772775|ref|YP_565467.1| - 1.8e-16 60.4 2.1 5.5e-16 58.9 2.1 1.8 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91772775|ref|YP_565467.1| - 0.0038 17.4 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91772775|ref|YP_565467.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91772775|ref|YP_565467.1| - 0.037 13.7 0.0 0.067 12.9 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease Amidohydro_1 PF01979.20 gi|91772776|ref|YP_565468.1| - 2e-21 76.7 0.2 4.2e-21 75.6 0.2 1.7 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|91772776|ref|YP_565468.1| - 1.1e-14 54.8 0.2 1.4e-06 28.1 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family ATPase PF06745.13 gi|91772777|ref|YP_565469.1| - 1.4e-44 152.1 0.2 1.4e-43 148.9 0.2 2.0 1 1 0 1 1 1 1 KaiC RecA PF00154.21 gi|91772777|ref|YP_565469.1| - 4.8e-07 29.5 0.0 7.2e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein DnaB_C PF03796.15 gi|91772777|ref|YP_565469.1| - 1.2e-06 28.0 0.0 2.6e-06 27.0 0.0 1.6 1 1 1 2 2 2 1 DnaB-like helicase C terminal domain Rad51 PF08423.11 gi|91772777|ref|YP_565469.1| - 1.6e-06 27.5 0.1 3.1e-06 26.6 0.1 1.4 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.6 gi|91772777|ref|YP_565469.1| - 2.9e-06 27.0 0.0 1.6e-05 24.6 0.0 2.0 1 1 0 1 1 1 1 AAA domain GvpD PF07088.11 gi|91772777|ref|YP_565469.1| - 1.5e-05 23.8 0.2 0.032 12.9 0.0 2.2 2 0 0 2 2 2 2 GvpD gas vesicle protein IstB_IS21 PF01695.17 gi|91772777|ref|YP_565469.1| - 3.2e-05 23.7 0.0 7.3e-05 22.6 0.0 1.6 2 0 0 2 2 1 1 IstB-like ATP binding protein AAA_16 PF13191.6 gi|91772777|ref|YP_565469.1| - 8.3e-05 23.0 0.0 0.00017 22.0 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|91772777|ref|YP_565469.1| - 0.00015 21.8 0.0 0.00042 20.4 0.0 1.8 1 1 1 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|91772777|ref|YP_565469.1| - 0.00019 21.2 0.3 0.00086 19.1 0.1 2.1 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|91772777|ref|YP_565469.1| - 0.00046 20.5 0.0 0.0012 19.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain T2SSE PF00437.20 gi|91772777|ref|YP_565469.1| - 0.00051 19.2 0.0 0.00082 18.5 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein PAXNEB PF05625.11 gi|91772777|ref|YP_565469.1| - 0.00071 18.8 0.0 0.0012 18.1 0.0 1.2 1 0 0 1 1 1 1 PAXNEB protein AAA_7 PF12775.7 gi|91772777|ref|YP_565469.1| - 0.0011 18.5 0.0 0.0024 17.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_18 PF13238.6 gi|91772777|ref|YP_565469.1| - 0.0011 19.5 0.0 0.0041 17.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|91772777|ref|YP_565469.1| - 0.0016 18.3 0.0 0.004 17.1 0.0 1.6 1 1 0 1 1 1 1 NACHT domain AAA PF00004.29 gi|91772777|ref|YP_565469.1| - 0.0017 18.8 0.1 0.0042 17.5 0.1 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|91772777|ref|YP_565469.1| - 0.0048 16.8 0.1 0.01 15.7 0.1 1.6 1 0 0 1 1 1 1 NTPase AAA_19 PF13245.6 gi|91772777|ref|YP_565469.1| - 0.0051 17.1 0.0 0.012 15.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain DAP3 PF10236.9 gi|91772777|ref|YP_565469.1| - 0.016 14.4 0.0 0.24 10.5 0.0 2.2 1 1 1 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AAA_5 PF07728.14 gi|91772777|ref|YP_565469.1| - 0.019 15.0 0.0 0.053 13.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF2075 PF09848.9 gi|91772777|ref|YP_565469.1| - 0.026 13.8 0.0 0.053 12.8 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_11 PF13086.6 gi|91772777|ref|YP_565469.1| - 0.028 14.2 0.0 0.062 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|91772777|ref|YP_565469.1| - 0.033 14.7 0.2 0.078 13.5 0.2 1.8 1 1 0 1 1 1 0 ABC transporter AAA_28 PF13521.6 gi|91772777|ref|YP_565469.1| - 0.033 14.4 0.1 0.061 13.6 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|91772777|ref|YP_565469.1| - 0.038 14.1 0.0 0.11 12.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|91772777|ref|YP_565469.1| - 0.044 13.5 0.0 0.083 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain PPV_E1_C PF00519.17 gi|91772777|ref|YP_565469.1| - 0.048 12.5 0.0 0.088 11.6 0.0 1.3 1 0 0 1 1 1 0 Papillomavirus helicase RNA_helicase PF00910.22 gi|91772777|ref|YP_565469.1| - 0.057 13.8 0.0 0.23 11.8 0.0 2.0 2 0 0 2 2 1 0 RNA helicase cobW PF02492.19 gi|91772777|ref|YP_565469.1| - 0.064 12.8 0.0 0.15 11.6 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Sigma54_activat PF00158.26 gi|91772777|ref|YP_565469.1| - 0.069 12.9 0.0 0.18 11.5 0.0 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_29 PF13555.6 gi|91772777|ref|YP_565469.1| - 0.14 11.9 0.2 0.28 10.9 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Ca_bind_SSO6904 PF18249.1 gi|91772777|ref|YP_565469.1| - 0.59 10.5 3.6 14 6.2 0.1 3.4 2 2 2 4 4 4 0 Calcium binding protein SSO6904 DUF1614 PF07758.11 gi|91772778|ref|YP_565470.1| - 1.1e-33 116.7 10.8 1.1e-33 116.7 10.8 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1614) AMP-binding_C_2 PF14535.6 gi|91772779|ref|YP_565471.1| - 1.1e-25 89.8 0.1 3.5e-25 88.1 0.0 1.9 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|91772779|ref|YP_565471.1| - 5.5e-09 35.1 0.0 8.3e-09 34.5 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme GH3 PF03321.13 gi|91772779|ref|YP_565471.1| - 0.00023 20.2 0.0 0.0019 17.2 0.0 2.0 2 0 0 2 2 2 1 GH3 auxin-responsive promoter POR PF01558.18 gi|91772780|ref|YP_565472.1| - 1.5e-36 126.1 0.1 1.7e-36 125.9 0.1 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|91772781|ref|YP_565473.1| - 1.3e-27 96.4 0.5 2.3e-27 95.6 0.5 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|91772781|ref|YP_565473.1| - 5.3e-18 65.6 0.1 8e-18 65.0 0.1 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|91772781|ref|YP_565473.1| - 4.8e-08 32.5 17.4 7.3e-06 25.6 3.8 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91772781|ref|YP_565473.1| - 3.9e-07 30.1 12.4 1.1e-06 28.7 10.4 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772781|ref|YP_565473.1| - 1.6e-05 24.7 17.3 0.0018 18.2 2.4 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91772781|ref|YP_565473.1| - 3.1e-05 24.5 10.3 0.0042 17.7 0.7 2.8 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91772781|ref|YP_565473.1| - 0.00011 22.1 19.2 0.0056 16.7 3.6 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91772781|ref|YP_565473.1| - 0.00028 20.9 13.7 0.00028 20.9 13.7 2.4 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91772781|ref|YP_565473.1| - 0.0004 20.5 12.4 0.00079 19.6 11.2 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain TPP_enzyme_N PF02776.18 gi|91772781|ref|YP_565473.1| - 0.0018 17.9 0.1 0.016 14.8 0.1 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transket_pyr PF02779.24 gi|91772781|ref|YP_565473.1| - 0.0061 16.3 0.2 0.041 13.6 0.1 2.4 2 1 0 2 2 2 1 Transketolase, pyrimidine binding domain Fer4_16 PF13484.6 gi|91772781|ref|YP_565473.1| - 0.0092 16.9 1.6 0.0092 16.9 1.6 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain PFOR_II PF17147.4 gi|91772781|ref|YP_565473.1| - 0.011 16.0 0.0 0.028 14.7 0.0 1.7 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II Fer4_3 PF12798.7 gi|91772781|ref|YP_565473.1| - 0.014 16.2 4.0 0.014 16.2 4.0 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|91772781|ref|YP_565473.1| - 0.03 15.1 7.5 0.89 10.3 1.2 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|91772781|ref|YP_565473.1| - 0.076 13.6 11.4 3.4 8.3 3.3 3.2 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|91772781|ref|YP_565473.1| - 0.29 11.7 19.0 0.54 10.9 3.8 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Tim17 PF02466.19 gi|91772781|ref|YP_565473.1| - 0.5 10.7 2.2 1.7 9.0 0.1 2.6 2 1 1 3 3 3 0 Tim17/Tim22/Tim23/Pmp24 family Fer4_8 PF13183.6 gi|91772781|ref|YP_565473.1| - 8.6 6.9 14.6 3.8 8.0 3.8 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain mCpol PF18182.1 gi|91772782|ref|YP_565474.1| - 0.032 14.5 0.0 0.051 13.9 0.0 1.2 1 0 0 1 1 1 0 minimal CRISPR polymerase domain RVT_1 PF00078.27 gi|91772783|ref|YP_565475.1| - 1.4e-42 145.7 0.1 3.1e-42 144.6 0.0 1.6 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_N PF13655.6 gi|91772783|ref|YP_565475.1| - 7.4e-28 96.6 2.2 7.4e-28 96.6 2.2 1.9 2 0 0 2 2 2 1 N-terminal domain of reverse transcriptase GIIM PF08388.11 gi|91772783|ref|YP_565475.1| - 3.4e-24 84.7 6.4 8.9e-24 83.4 6.4 1.8 1 0 0 1 1 1 1 Group II intron, maturase-specific domain Intron_maturas2 PF01348.21 gi|91772783|ref|YP_565475.1| - 0.012 15.6 3.5 0.12 12.3 0.5 3.7 3 1 0 3 3 3 0 Type II intron maturase HNH PF01844.23 gi|91772783|ref|YP_565475.1| - 0.73 10.1 6.0 1.5 9.0 6.0 1.6 1 0 0 1 1 1 0 HNH endonuclease Rsm22 PF09243.10 gi|91772784|ref|YP_565476.1| - 8.3e-07 28.5 0.0 1.5e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 Methyltransf_23 PF13489.6 gi|91772784|ref|YP_565476.1| - 5.9e-06 26.2 0.0 1.1e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91772784|ref|YP_565476.1| - 8.3e-06 25.7 0.0 1.7e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|91772784|ref|YP_565476.1| - 5.3e-05 22.6 0.5 0.00029 20.2 0.5 2.0 1 1 0 1 1 1 1 O-methyltransferase domain Methyltransf_12 PF08242.12 gi|91772784|ref|YP_565476.1| - 0.00075 20.2 0.2 0.0083 16.8 0.1 2.4 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|91772784|ref|YP_565476.1| - 0.0017 17.9 0.0 0.0051 16.4 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|91772784|ref|YP_565476.1| - 0.0042 17.7 0.0 0.0082 16.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91772784|ref|YP_565476.1| - 0.005 17.5 0.0 0.011 16.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain TRM13 PF05206.14 gi|91772784|ref|YP_565476.1| - 0.087 12.3 0.1 0.15 11.6 0.1 1.5 1 0 0 1 1 1 0 Methyltransferase TRM13 Levi_coat PF01819.17 gi|91772784|ref|YP_565476.1| - 0.23 11.4 0.5 27 4.8 0.1 2.8 3 0 0 3 3 3 0 Levivirus coat protein HATPase_c PF02518.26 gi|91772785|ref|YP_565477.1| - 1.3e-22 80.4 0.0 2.2e-22 79.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91772785|ref|YP_565477.1| - 1.5e-15 56.9 0.0 3e-15 56.0 0.0 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 gi|91772785|ref|YP_565477.1| - 0.0099 15.7 0.0 0.019 14.8 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4080 PF13311.6 gi|91772786|ref|YP_565478.1| - 0.17 12.0 0.0 0.27 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4080) tRNA-synt_2 PF00152.20 gi|91772787|ref|YP_565479.1| - 2.3e-89 299.6 0.1 2.8e-89 299.3 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|91772787|ref|YP_565479.1| - 8.9e-15 54.4 0.8 1.6e-14 53.6 0.8 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|91772787|ref|YP_565479.1| - 0.00073 19.1 0.0 0.065 12.7 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Rib_5-P_isom_A PF06026.14 gi|91772788|ref|YP_565480.1| - 2.6e-60 203.0 0.7 3.4e-60 202.6 0.7 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|91772788|ref|YP_565480.1| - 2.3e-08 34.1 2.0 2.9e-05 24.1 0.1 2.3 1 1 0 2 2 2 2 DeoR C terminal sensor domain Sugar-bind PF04198.13 gi|91772788|ref|YP_565480.1| - 0.012 14.7 0.1 0.022 13.9 0.1 1.4 1 0 0 1 1 1 0 Putative sugar-binding domain Dppa2_A PF14049.6 gi|91772788|ref|YP_565480.1| - 0.039 14.1 0.2 0.094 12.9 0.1 1.7 2 0 0 2 2 2 0 Dppa2/4 conserved region in higher vertebrates FeoA PF04023.14 gi|91772789|ref|YP_565481.1| - 2.2e-05 24.6 0.0 2.9e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 FeoA domain UBA PF00627.31 gi|91772789|ref|YP_565481.1| - 0.12 12.3 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 UBA/TS-N domain Fe_dep_repress PF01325.19 gi|91772790|ref|YP_565482.1| - 5e-17 61.8 0.3 8.4e-17 61.1 0.3 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|91772790|ref|YP_565482.1| - 4.5e-15 55.5 0.1 7.2e-15 54.8 0.1 1.3 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_24 PF13412.6 gi|91772790|ref|YP_565482.1| - 5.4e-05 22.7 0.0 8.2e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 gi|91772790|ref|YP_565482.1| - 0.00014 21.5 0.0 0.00034 20.3 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain MarR PF01047.22 gi|91772790|ref|YP_565482.1| - 0.0003 20.7 0.0 0.00052 19.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_micro PF17007.5 gi|91772790|ref|YP_565482.1| - 0.00031 19.7 0.1 0.00033 19.6 0.1 1.2 1 0 0 1 1 1 1 HTH-like HTH_IclR PF09339.10 gi|91772790|ref|YP_565482.1| - 0.00032 20.4 0.0 0.00073 19.3 0.0 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|91772790|ref|YP_565482.1| - 0.0011 18.8 0.0 0.002 18.0 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|91772790|ref|YP_565482.1| - 0.0024 17.7 0.0 0.0041 17.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|91772790|ref|YP_565482.1| - 0.0037 17.2 0.0 0.011 15.7 0.0 1.7 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|91772790|ref|YP_565482.1| - 0.0083 16.0 0.1 0.016 15.1 0.1 1.6 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|91772790|ref|YP_565482.1| - 0.02 15.3 0.0 0.03 14.7 0.0 1.4 1 1 0 1 1 1 0 Transcriptional regulator RQC PF09382.10 gi|91772790|ref|YP_565482.1| - 0.063 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 RQC domain LcrG PF07216.12 gi|91772790|ref|YP_565482.1| - 0.076 12.9 0.0 3.3 7.7 0.0 2.2 1 1 1 2 2 2 0 LcrG protein DUF505 PF04458.12 gi|91772790|ref|YP_565482.1| - 0.11 10.8 0.0 0.15 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HTH_34 PF13601.6 gi|91772790|ref|YP_565482.1| - 0.13 12.5 0.1 0.57 10.4 0.0 2.2 2 1 0 2 2 2 0 Winged helix DNA-binding domain FeoC PF09012.10 gi|91772790|ref|YP_565482.1| - 0.17 12.0 0.0 0.31 11.1 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_28 PF13518.6 gi|91772790|ref|YP_565482.1| - 0.17 12.0 0.0 0.84 9.8 0.0 2.2 2 1 1 3 3 3 0 Helix-turn-helix domain FeoA PF04023.14 gi|91772791|ref|YP_565483.1| - 1.3e-17 63.8 0.1 1.4e-17 63.7 0.1 1.0 1 0 0 1 1 1 1 FeoA domain FeoA PF04023.14 gi|91772792|ref|YP_565484.1| - 9.8e-19 67.4 0.1 1.1e-18 67.3 0.1 1.0 1 0 0 1 1 1 1 FeoA domain Cpn10 PF00166.21 gi|91772792|ref|YP_565484.1| - 0.061 13.4 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Chaperonin 10 Kd subunit KOW PF00467.29 gi|91772792|ref|YP_565484.1| - 1 9.4 4.5 2.1 8.4 0.4 2.3 2 1 0 2 2 2 0 KOW motif FeoB_N PF02421.18 gi|91772793|ref|YP_565485.1| - 7.7e-71 236.7 0.6 1.2e-70 236.0 0.6 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|91772793|ref|YP_565485.1| - 7e-47 158.3 12.2 1.7e-30 105.5 2.6 2.8 2 0 0 2 2 2 2 Nucleoside recognition FeoB_C PF07664.12 gi|91772793|ref|YP_565485.1| - 5.9e-22 77.1 1.3 5.9e-22 77.1 1.3 3.6 4 0 0 4 4 4 1 Ferrous iron transport protein B C terminus MMR_HSR1 PF01926.23 gi|91772793|ref|YP_565485.1| - 2.3e-19 69.5 0.2 4.6e-19 68.6 0.2 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_Cyto PF17910.1 gi|91772793|ref|YP_565485.1| - 4.9e-17 62.3 0.7 1.2e-16 61.1 0.7 1.7 1 0 0 1 1 1 1 FeoB cytosolic helical domain SRPRB PF09439.10 gi|91772793|ref|YP_565485.1| - 3.5e-05 23.3 0.0 6.8e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AIG1 PF04548.16 gi|91772793|ref|YP_565485.1| - 5.1e-05 22.7 0.2 0.00043 19.7 0.0 2.1 1 1 0 2 2 2 1 AIG1 family RsgA_GTPase PF03193.16 gi|91772793|ref|YP_565485.1| - 0.00013 21.9 0.6 0.049 13.5 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 gi|91772793|ref|YP_565485.1| - 0.00093 18.8 1.5 0.063 12.8 1.5 2.6 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Arf PF00025.21 gi|91772793|ref|YP_565485.1| - 0.021 14.3 0.3 0.042 13.3 0.3 1.5 1 0 0 1 1 1 0 ADP-ribosylation factor family AAA_25 PF13481.6 gi|91772793|ref|YP_565485.1| - 0.099 12.2 0.0 0.21 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|91772793|ref|YP_565485.1| - 0.1 11.6 0.3 1.9 7.4 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Parvo_NS1 PF01057.17 gi|91772793|ref|YP_565485.1| - 0.15 11.2 0.1 0.24 10.4 0.1 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 ATP-synt_S1 PF05827.12 gi|91772794|ref|YP_565486.1| - 0.12 12.2 0.6 0.23 11.3 0.6 1.5 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) DUF1700 PF08006.11 gi|91772794|ref|YP_565486.1| - 6.7 6.2 12.4 10 5.6 12.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) FeoC PF09012.10 gi|91772795|ref|YP_565487.1| - 1.5e-08 34.6 0.5 2.6e-08 33.8 0.1 1.6 2 0 0 2 2 2 1 FeoC like transcriptional regulator HTH_24 PF13412.6 gi|91772795|ref|YP_565487.1| - 0.042 13.4 0.1 0.064 12.8 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 gi|91772795|ref|YP_565487.1| - 0.054 13.3 0.0 0.088 12.6 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain HTH_34 PF13601.6 gi|91772795|ref|YP_565487.1| - 0.13 12.5 0.0 2 8.7 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain TrmB PF01978.19 gi|91772795|ref|YP_565487.1| - 0.13 12.1 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|91772796|ref|YP_565488.1| - 0.00026 20.9 0.0 0.0093 15.9 0.0 2.0 1 1 0 1 1 1 1 Winged helix-turn-helix FeoC PF09012.10 gi|91772796|ref|YP_565488.1| - 0.0003 20.8 0.1 0.00046 20.2 0.1 1.3 1 0 0 1 1 1 1 FeoC like transcriptional regulator PCI PF01399.27 gi|91772796|ref|YP_565488.1| - 0.029 14.9 0.0 0.054 14.0 0.0 1.4 2 0 0 2 2 2 0 PCI domain Sulfolobus_pRN PF05584.11 gi|91772796|ref|YP_565488.1| - 0.063 13.3 0.1 0.097 12.7 0.1 1.2 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein DUF2802 PF10975.8 gi|91772796|ref|YP_565488.1| - 0.13 12.4 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2802) Fe_dep_repress PF01325.19 gi|91772797|ref|YP_565489.1| - 4.4e-18 65.2 0.0 5e-18 65.1 0.0 1.0 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 gi|91772797|ref|YP_565489.1| - 0.00013 21.7 0.0 0.00016 21.5 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|91772797|ref|YP_565489.1| - 0.0025 17.4 0.0 0.003 17.1 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|91772797|ref|YP_565489.1| - 0.015 15.6 0.0 0.017 15.5 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator HTH_IclR PF09339.10 gi|91772797|ref|YP_565489.1| - 0.052 13.4 0.0 0.07 12.9 0.0 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain DDRGK PF09756.9 gi|91772797|ref|YP_565489.1| - 0.059 13.0 0.0 0.065 12.8 0.0 1.0 1 0 0 1 1 1 0 DDRGK domain MarR PF01047.22 gi|91772797|ref|YP_565489.1| - 0.08 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 MarR family HrcA_DNA-bdg PF03444.15 gi|91772797|ref|YP_565489.1| - 0.11 12.2 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ATP-grasp_3 PF02655.14 gi|91772798|ref|YP_565490.1| - 0.00078 19.5 0.1 0.0016 18.5 0.1 1.6 1 0 0 1 1 1 1 ATP-grasp domain Baculo_E56 PF04639.12 gi|91772798|ref|YP_565490.1| - 0.036 13.4 0.3 0.11 11.7 0.1 1.8 1 1 2 3 3 3 0 Baculoviral E56 protein, specific to ODV envelope DUF772 PF05598.11 gi|91772799|ref|YP_565491.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91772799|ref|YP_565491.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91772799|ref|YP_565491.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91772799|ref|YP_565491.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91772799|ref|YP_565491.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease CDP-OH_P_transf PF01066.21 gi|91772800|ref|YP_565492.1| - 1.5e-10 41.7 0.5 1.5e-10 41.7 0.5 3.0 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Aminotran_1_2 PF00155.21 gi|91772801|ref|YP_565493.1| - 9.5e-31 107.3 0.0 1.2e-30 107.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II NTP_transferase PF00483.23 gi|91772802|ref|YP_565494.1| - 3.2e-10 40.0 0.1 1.1e-09 38.3 0.1 1.9 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|91772802|ref|YP_565494.1| - 1.5e-08 35.1 0.0 1.9e-08 34.8 0.0 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain TrkA_C PF02080.21 gi|91772804|ref|YP_565496.1| - 1.7e-24 85.4 0.3 2.7e-13 49.5 0.1 2.7 2 1 0 2 2 2 2 TrkA-C domain PhoU PF01895.19 gi|91772804|ref|YP_565496.1| - 2.4e-20 72.8 15.3 4.1e-10 40.0 1.4 2.4 2 0 0 2 2 2 2 PhoU domain PhoU_div PF01865.16 gi|91772804|ref|YP_565496.1| - 0.0056 16.0 7.1 0.13 11.6 0.3 2.2 2 0 0 2 2 2 2 Protein of unknown function DUF47 MgtE PF01769.16 gi|91772805|ref|YP_565497.1| - 2.1e-18 66.9 9.3 2.1e-18 66.9 9.3 1.4 2 0 0 2 2 2 1 Divalent cation transporter MgtE PF01769.16 gi|91772806|ref|YP_565498.1| - 2.6e-21 76.3 15.9 3.2e-21 76.0 11.4 2.0 1 1 1 2 2 2 2 Divalent cation transporter PDDEXK_4 PF14281.6 gi|91772807|ref|YP_565499.1| - 1.9e-09 38.0 1.3 3.8e-09 37.0 1.3 1.5 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily DUF2972 PF11186.8 gi|91772807|ref|YP_565499.1| - 0.0053 16.7 2.9 0.0053 16.7 2.9 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF2972) HSDR_N_2 PF13588.6 gi|91772807|ref|YP_565499.1| - 0.0082 16.1 0.1 0.087 12.8 0.0 2.4 1 1 1 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) VraX PF17412.2 gi|91772807|ref|YP_565499.1| - 0.063 12.9 1.2 0.12 12.1 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function DDE_Tnp_1 PF01609.21 gi|91772809|ref|YP_565501.1| - 2.4e-06 27.3 0.5 4e-06 26.6 0.5 1.3 1 0 0 1 1 1 1 Transposase DDE domain Hit1_C PF18268.1 gi|91772809|ref|YP_565501.1| - 0.0098 16.0 0.1 0.026 14.6 0.1 1.7 1 0 0 1 1 1 1 Hit1 C-terminal TetR_C_8 PF14278.6 gi|91772809|ref|YP_565501.1| - 0.046 13.8 1.8 2.2 8.4 0.1 2.6 2 0 0 2 2 2 0 Transcriptional regulator C-terminal region Fur_reg_FbpB PF13040.6 gi|91772809|ref|YP_565501.1| - 0.34 10.5 1.6 3.2 7.4 0.1 2.4 2 0 0 2 2 2 0 Fur-regulated basic protein B SepSecS PF05889.13 gi|91772810|ref|YP_565502.1| - 3.2e-19 68.9 0.0 4.8e-19 68.3 0.0 1.2 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_5 PF00266.19 gi|91772810|ref|YP_565502.1| - 1.1e-13 50.9 0.0 1.4e-13 50.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|91772810|ref|YP_565502.1| - 0.003 16.1 0.0 0.005 15.4 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme HemeBinding_Shp PF11545.8 gi|91772810|ref|YP_565502.1| - 0.09 12.8 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Cell surface heme-binding protein Shp Cys_Met_Meta_PP PF01053.20 gi|91772811|ref|YP_565503.1| - 4.7e-141 469.8 0.0 5.3e-141 469.6 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|91772811|ref|YP_565503.1| - 1.2e-11 44.5 0.1 2e-11 43.8 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|91772811|ref|YP_565503.1| - 8e-08 31.6 0.4 1.4e-07 30.9 0.4 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|91772811|ref|YP_565503.1| - 8.5e-06 25.2 0.0 1.2e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|91772811|ref|YP_565503.1| - 1.6e-05 24.3 0.0 3e-05 23.4 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase GDC-P PF02347.16 gi|91772811|ref|YP_565503.1| - 0.016 14.0 0.0 0.027 13.3 0.0 1.2 1 0 0 1 1 1 0 Glycine cleavage system P-protein SepSecS PF05889.13 gi|91772811|ref|YP_565503.1| - 0.11 11.2 0.0 0.17 10.6 0.0 1.2 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Met_gamma_lyase PF06838.11 gi|91772811|ref|YP_565503.1| - 0.12 10.8 2.0 0.31 9.5 2.0 1.7 1 1 0 1 1 1 0 Methionine gamma-lyase Abhydrolase_1 PF00561.20 gi|91772812|ref|YP_565504.1| - 8.7e-36 123.9 0.1 1e-35 123.6 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold CBS PF00571.28 gi|91772812|ref|YP_565504.1| - 6.5e-28 97.0 1.5 1.1e-13 51.4 0.3 2.6 2 0 0 2 2 2 2 CBS domain Hydrolase_4 PF12146.8 gi|91772812|ref|YP_565504.1| - 0.00029 20.2 0.1 0.0017 17.7 0.1 1.9 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|91772812|ref|YP_565504.1| - 0.019 15.6 0.0 0.023 15.3 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family Esterase PF00756.20 gi|91772812|ref|YP_565504.1| - 0.14 11.8 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 Putative esterase PPDK_N PF01326.19 gi|91772813|ref|YP_565505.1| - 4.8e-114 381.0 0.0 7.8e-114 380.3 0.0 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|91772813|ref|YP_565505.1| - 1e-60 205.4 0.0 1.6e-60 204.7 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|91772813|ref|YP_565505.1| - 1.2e-25 89.0 0.5 1.1e-24 85.9 0.4 2.5 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPR PF01535.20 gi|91772813|ref|YP_565505.1| - 0.067 13.5 0.3 0.84 10.0 0.2 2.8 2 0 0 2 2 2 0 PPR repeat PPR_2 PF13041.6 gi|91772813|ref|YP_565505.1| - 0.091 13.0 0.1 0.43 10.8 0.0 2.0 2 0 0 2 2 2 0 PPR repeat family OrfB_Zn_ribbon PF07282.11 gi|91772814|ref|YP_565506.1| - 5.4e-24 83.9 0.7 1.3e-23 82.7 0.7 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|91772814|ref|YP_565506.1| - 3.1e-12 46.8 0.1 5.8e-12 45.9 0.1 1.4 1 0 0 1 1 1 1 Probable transposase C1_2 PF03107.16 gi|91772814|ref|YP_565506.1| - 0.00025 21.3 1.8 0.00051 20.3 1.8 1.5 1 0 0 1 1 1 1 C1 domain C1_1 PF00130.22 gi|91772814|ref|YP_565506.1| - 0.011 15.6 1.2 0.023 14.6 1.2 1.5 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) HypA PF01155.19 gi|91772814|ref|YP_565506.1| - 0.031 14.3 0.1 0.056 13.5 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|91772814|ref|YP_565506.1| - 0.041 13.9 1.1 0.081 13.0 1.1 1.4 1 0 0 1 1 1 0 Double zinc ribbon DNA_RNApol_7kD PF03604.13 gi|91772814|ref|YP_565506.1| - 0.14 11.8 3.5 0.37 10.5 3.5 1.7 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit TF_Zn_Ribbon PF08271.12 gi|91772814|ref|YP_565506.1| - 0.15 11.6 0.1 0.26 10.8 0.1 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding zf-NADH-PPase PF09297.11 gi|91772814|ref|YP_565506.1| - 0.21 11.3 3.5 0.8 9.4 3.7 1.9 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|91772814|ref|YP_565506.1| - 0.42 10.6 2.4 3.6 7.6 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|91772814|ref|YP_565506.1| - 0.48 10.2 7.0 1.3 8.8 1.0 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-C2H2_11 PF16622.5 gi|91772814|ref|YP_565506.1| - 0.51 10.1 7.7 2.3 8.0 0.3 3.0 3 0 0 3 3 3 0 zinc-finger C2H2-type DUF35_N PF12172.8 gi|91772814|ref|YP_565506.1| - 1.5 8.8 4.3 8.1 6.4 0.2 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc-ribbon_6 PF10005.9 gi|91772814|ref|YP_565506.1| - 2.8 8.7 6.7 2.5 8.8 0.1 3.1 2 1 2 4 4 4 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|91772814|ref|YP_565506.1| - 3.6 7.4 5.8 88 3.0 5.9 2.5 1 1 1 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|91772814|ref|YP_565506.1| - 7.7 6.7 5.9 18 5.6 0.6 2.4 1 1 1 2 2 2 0 Zinc ribbon domain VWA PF00092.28 gi|91772815|ref|YP_565507.1| - 5.3e-13 49.6 0.7 1.4e-07 32.0 0.0 2.6 2 0 0 2 2 2 2 von Willebrand factor type A domain GATase1_like PF07090.11 gi|91772815|ref|YP_565507.1| - 1.6e-09 37.6 0.0 0.00049 19.6 0.0 2.4 2 0 0 2 2 2 2 Putative glutamine amidotransferase VWA_2 PF13519.6 gi|91772815|ref|YP_565507.1| - 3.2e-07 31.0 0.0 3.1e-06 27.8 0.0 2.5 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|91772815|ref|YP_565507.1| - 0.00016 21.1 0.0 0.0015 17.9 0.0 2.4 3 0 0 3 3 3 1 VWA domain containing CoxE-like protein DUF4350 PF14258.6 gi|91772815|ref|YP_565507.1| - 0.17 12.4 0.3 1.9 9.0 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4350) BatA PF07584.11 gi|91772815|ref|YP_565507.1| - 9.9 6.6 10.5 3.5 8.1 0.5 2.7 2 1 1 3 3 3 0 Aerotolerance regulator N-terminal BatA PF07584.11 gi|91772816|ref|YP_565508.1| - 5.3e-15 55.5 9.6 5.3e-15 55.5 9.6 1.6 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal VWA_2 PF13519.6 gi|91772816|ref|YP_565508.1| - 6.8e-06 26.7 1.1 3.9e-05 24.3 0.4 2.7 2 1 0 2 2 2 1 von Willebrand factor type A domain VWA PF00092.28 gi|91772816|ref|YP_565508.1| - 6.2e-05 23.3 2.5 0.0053 17.0 0.5 3.1 1 1 1 2 2 2 1 von Willebrand factor type A domain ABC_transp_aux PF09822.9 gi|91772816|ref|YP_565508.1| - 9.8e-05 21.9 0.0 0.00031 20.3 0.0 1.7 1 1 0 1 1 1 1 ABC-type uncharacterized transport system DUF4350 PF14258.6 gi|91772816|ref|YP_565508.1| - 0.014 15.8 0.1 1.3 9.6 0.0 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4350) Glyco_hydro_42M PF08532.10 gi|91772816|ref|YP_565508.1| - 0.019 14.5 0.1 0.043 13.3 0.1 1.5 1 1 0 1 1 1 0 Beta-galactosidase trimerisation domain DUF58 PF01882.18 gi|91772817|ref|YP_565509.1| - 1e-19 70.6 0.0 2e-19 69.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|91772817|ref|YP_565509.1| - 3.2e-06 27.7 0.2 7.8e-06 26.5 0.1 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA PF00092.28 gi|91772817|ref|YP_565509.1| - 4.7e-05 23.7 0.3 7.3e-05 23.1 0.3 1.4 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|91772817|ref|YP_565509.1| - 0.0011 18.3 0.2 0.0025 17.2 0.2 1.6 1 1 0 1 1 1 1 VWA domain containing CoxE-like protein AAA_3 PF07726.11 gi|91772818|ref|YP_565510.1| - 3.7e-61 204.8 0.1 5.7e-61 204.1 0.1 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|91772818|ref|YP_565510.1| - 2.8e-18 65.5 0.1 5.6e-18 64.6 0.1 1.5 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|91772818|ref|YP_565510.1| - 3.6e-12 46.5 0.0 7.7e-12 45.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|91772818|ref|YP_565510.1| - 2.2e-05 24.9 0.0 6.8e-05 23.3 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|91772818|ref|YP_565510.1| - 0.00021 20.5 0.0 0.00049 19.3 0.0 1.7 1 1 0 1 1 1 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|91772818|ref|YP_565510.1| - 0.00083 19.1 0.0 0.003 17.3 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|91772818|ref|YP_565510.1| - 0.0048 16.7 0.0 0.55 10.0 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|91772818|ref|YP_565510.1| - 0.0086 15.5 0.1 0.11 11.9 0.0 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 gi|91772818|ref|YP_565510.1| - 0.091 13.1 0.0 4.7 7.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain PDT PF00800.18 gi|91772820|ref|YP_565512.1| - 4.1e-58 196.2 0.0 5.9e-58 195.7 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|91772820|ref|YP_565512.1| - 1.4e-09 37.6 0.0 2.6e-09 36.7 0.0 1.4 1 0 0 1 1 1 1 ACT domain Metalloenzyme PF01676.18 gi|91772821|ref|YP_565513.1| - 2.8e-11 43.3 0.0 8.9e-11 41.6 0.0 1.9 2 0 0 2 2 2 1 Metalloenzyme superfamily Sulfatase PF00884.23 gi|91772821|ref|YP_565513.1| - 1.6e-08 34.3 0.0 4.2e-08 33.0 0.0 1.6 2 0 0 2 2 2 1 Sulfatase Phosphodiest PF01663.22 gi|91772821|ref|YP_565513.1| - 0.001 18.7 0.2 0.01 15.5 0.0 2.5 3 1 0 3 3 3 1 Type I phosphodiesterase / nucleotide pyrophosphatase URO-D PF01208.17 gi|91772822|ref|YP_565514.1| - 3.1e-92 309.4 0.2 3.5e-92 309.2 0.2 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF2375 PF09558.10 gi|91772822|ref|YP_565514.1| - 0.16 12.0 0.0 0.35 10.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2375) RACo_C_ter PF14574.6 gi|91772823|ref|YP_565515.1| - 1.7e-68 230.5 3.8 3e-68 229.7 3.8 1.4 1 0 0 1 1 1 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|91772823|ref|YP_565515.1| - 3e-09 36.8 0.3 1.8e-08 34.2 0.0 2.4 2 0 0 2 2 2 1 RACo middle region Fer4_6 PF12837.7 gi|91772823|ref|YP_565515.1| - 2.7e-07 30.4 11.8 0.00052 20.0 3.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|91772823|ref|YP_565515.1| - 3.5e-07 29.8 12.7 1.2e-06 28.1 4.3 2.7 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91772823|ref|YP_565515.1| - 1.7e-06 28.5 10.1 6.6e-06 26.6 10.5 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772823|ref|YP_565515.1| - 2.2e-06 28.5 9.3 0.00018 22.4 1.6 2.7 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|91772823|ref|YP_565515.1| - 1.2e-05 25.3 11.1 4.3e-05 23.6 11.3 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772823|ref|YP_565515.1| - 2e-05 24.6 12.8 6.1e-05 23.0 12.9 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772823|ref|YP_565515.1| - 2.4e-05 24.1 10.5 0.00078 19.4 1.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91772823|ref|YP_565515.1| - 4.5e-05 23.5 11.6 9.9e-05 22.4 11.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772823|ref|YP_565515.1| - 0.00024 21.4 12.3 0.0011 19.3 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|91772823|ref|YP_565515.1| - 0.032 15.1 15.8 0.18 12.8 3.6 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91772823|ref|YP_565515.1| - 0.047 14.2 1.0 0.047 14.2 1.0 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91772823|ref|YP_565515.1| - 0.38 11.3 14.0 0.15 12.7 2.8 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91772823|ref|YP_565515.1| - 0.52 10.9 12.8 3 8.5 12.8 2.2 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|91772823|ref|YP_565515.1| - 2.1 8.5 13.4 26 5.0 13.4 2.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain PAS PF00989.25 gi|91772824|ref|YP_565516.1| - 2.1e-50 169.5 0.0 1.7e-08 34.5 0.0 6.4 6 0 0 6 6 6 6 PAS fold PAS_9 PF13426.7 gi|91772824|ref|YP_565516.1| - 2.4e-46 156.3 10.0 4.7e-12 46.1 0.0 6.5 6 0 0 6 6 6 6 PAS domain PAS_4 PF08448.10 gi|91772824|ref|YP_565516.1| - 1.7e-37 128.0 0.0 4.1e-07 30.2 0.0 6.3 6 0 0 6 6 6 6 PAS fold PAS_3 PF08447.12 gi|91772824|ref|YP_565516.1| - 2.1e-32 111.2 0.0 2.8e-16 59.6 0.1 5.5 5 0 0 5 5 5 3 PAS fold PAS_8 PF13188.7 gi|91772824|ref|YP_565516.1| - 8.4e-26 89.5 0.1 1.6e-06 28.0 0.0 6.2 6 0 0 6 6 6 4 PAS domain GAF_2 PF13185.6 gi|91772824|ref|YP_565516.1| - 2.5e-11 44.0 0.0 6.5e-05 23.3 0.0 2.6 2 0 0 2 2 2 2 GAF domain PAS_7 PF12860.7 gi|91772824|ref|YP_565516.1| - 3.7e-08 33.5 0.1 0.13 12.4 0.0 6.0 5 2 0 5 5 5 2 PAS fold GAF_3 PF13492.6 gi|91772824|ref|YP_565516.1| - 0.0011 19.3 0.0 0.017 15.5 0.0 2.4 2 0 0 2 2 2 1 GAF domain B12-binding PF02310.19 gi|91772825|ref|YP_565517.1| - 4.9e-16 58.9 0.1 8.3e-16 58.1 0.1 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|91772825|ref|YP_565517.1| - 7.8e-16 58.3 0.3 3.1e-15 56.4 0.0 2.0 2 0 0 2 2 2 1 B12 binding domain UPF0180 PF03698.13 gi|91772825|ref|YP_565517.1| - 0.029 14.5 0.5 0.15 12.3 0.0 2.4 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0180) DUF2192 PF09958.9 gi|91772825|ref|YP_565517.1| - 0.031 13.8 0.2 0.054 13.0 0.2 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2192) DNA_pol3_gamma3 PF12169.8 gi|91772825|ref|YP_565517.1| - 0.04 13.8 0.0 0.074 13.0 0.0 1.4 1 0 0 1 1 1 0 DNA polymerase III subunits gamma and tau domain III SpoVAD PF07451.11 gi|91772825|ref|YP_565517.1| - 0.046 12.4 0.2 0.057 12.1 0.2 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) Rep_fac_C PF08542.11 gi|91772825|ref|YP_565517.1| - 0.15 12.5 0.1 9.7 6.7 0.0 2.5 2 0 0 2 2 2 0 Replication factor C C-terminal domain MtaB PF12176.8 gi|91772826|ref|YP_565518.1| - 4.1e-223 741.2 0.5 4.7e-223 741.1 0.5 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit B12-binding PF02310.19 gi|91772827|ref|YP_565519.1| - 1.4e-18 67.1 0.3 2.7e-18 66.1 0.3 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|91772827|ref|YP_565519.1| - 4e-16 59.2 0.2 1.2e-15 57.7 0.2 1.8 1 0 0 1 1 1 1 B12 binding domain MtaB PF12176.8 gi|91772828|ref|YP_565520.1| - 5.1e-235 780.5 3.8 5.8e-235 780.3 3.8 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit Rhamnogal_lyase PF06045.11 gi|91772828|ref|YP_565520.1| - 0.036 13.5 0.0 0.097 12.1 0.0 1.7 2 0 0 2 2 2 0 Rhamnogalacturonate lyase family Gpr1_Fun34_YaaH PF01184.19 gi|91772829|ref|YP_565521.1| - 5e-24 85.1 28.3 6.4e-24 84.7 28.3 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Hydant_A_N PF05378.13 gi|91772830|ref|YP_565522.1| - 4.9e-32 111.1 0.8 4.7e-27 94.8 0.1 3.3 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|91772830|ref|YP_565522.1| - 5e-31 108.0 0.4 3.2e-29 102.1 0.0 2.4 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|91772830|ref|YP_565522.1| - 4.9e-08 32.0 1.1 0.002 16.8 0.2 2.4 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|91772830|ref|YP_565522.1| - 0.01 15.3 0.3 0.83 9.1 0.1 2.6 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family DprA_WH PF17782.1 gi|91772830|ref|YP_565522.1| - 0.018 15.2 0.0 0.32 11.2 0.0 2.5 1 1 1 2 2 2 0 DprA winged helix domain StbA PF06406.11 gi|91772830|ref|YP_565522.1| - 0.031 13.5 0.1 0.074 12.3 0.1 1.6 1 0 0 1 1 1 0 StbA protein Sda PF08970.10 gi|91772830|ref|YP_565522.1| - 0.046 13.5 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Sporulation inhibitor A ROK PF00480.20 gi|91772830|ref|YP_565522.1| - 0.15 11.5 0.1 0.28 10.6 0.1 1.4 1 0 0 1 1 1 0 ROK family cobW PF02492.19 gi|91772831|ref|YP_565523.1| - 1.1e-36 126.1 0.6 1.9e-36 125.3 0.6 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.23 gi|91772831|ref|YP_565523.1| - 0.012 15.7 3.7 0.075 13.1 3.7 2.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain SRP54 PF00448.22 gi|91772831|ref|YP_565523.1| - 0.016 14.9 0.5 0.044 13.4 0.5 1.8 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|91772831|ref|YP_565523.1| - 0.028 13.4 2.4 0.05 12.6 0.3 2.3 2 1 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 gi|91772831|ref|YP_565523.1| - 0.11 12.5 0.7 0.35 10.8 0.2 2.1 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B HATPase_c PF02518.26 gi|91772833|ref|YP_565525.1| - 3.6e-34 117.6 0.2 1.8e-33 115.4 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.6 gi|91772833|ref|YP_565525.1| - 9.5e-29 100.5 0.0 5.9e-28 97.9 0.0 2.0 2 0 0 2 2 2 1 GAF domain HisKA PF00512.25 gi|91772833|ref|YP_565525.1| - 1.1e-15 57.4 0.1 1.1e-15 57.4 0.1 2.5 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 gi|91772833|ref|YP_565525.1| - 2.6e-07 30.9 0.3 8.3e-07 29.2 0.0 2.0 2 0 0 2 2 2 1 PAS domain HATPase_c_5 PF14501.6 gi|91772833|ref|YP_565525.1| - 3.4e-05 23.7 0.0 0.00011 22.0 0.0 1.8 1 0 0 1 1 1 1 GHKL domain PAS PF00989.25 gi|91772833|ref|YP_565525.1| - 0.00021 21.3 0.0 0.00078 19.4 0.0 2.1 2 0 0 2 2 2 1 PAS fold GAF_3 PF13492.6 gi|91772833|ref|YP_565525.1| - 0.00044 20.6 0.0 0.0012 19.2 0.0 1.7 1 0 0 1 1 1 1 GAF domain HATPase_c_3 PF13589.6 gi|91772833|ref|YP_565525.1| - 0.00052 19.8 0.0 0.0032 17.3 0.0 2.2 1 1 1 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|91772833|ref|YP_565525.1| - 0.0015 18.7 0.0 0.0035 17.6 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 gi|91772833|ref|YP_565525.1| - 0.0048 16.9 0.1 0.023 14.7 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain WEMBL PF05701.11 gi|91772833|ref|YP_565525.1| - 0.0052 15.5 0.4 0.0076 15.0 0.4 1.2 1 0 0 1 1 1 1 Weak chloroplast movement under blue light GAF PF01590.26 gi|91772833|ref|YP_565525.1| - 0.0075 16.9 0.0 0.014 16.1 0.0 1.4 1 0 0 1 1 1 1 GAF domain Phyto_Pns9_10 PF05878.11 gi|91772833|ref|YP_565525.1| - 0.11 11.6 0.6 0.21 10.7 0.6 1.5 1 0 0 1 1 1 0 Phytoreovirus nonstructural protein Pns9/Pns10 DUF4795 PF16043.5 gi|91772833|ref|YP_565525.1| - 0.13 11.9 2.5 0.28 10.8 2.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) ATPase PF06745.13 gi|91772834|ref|YP_565526.1| - 1.4e-33 116.2 0.0 2e-33 115.7 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|91772834|ref|YP_565526.1| - 3e-05 23.7 0.0 4.2e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain GvpD PF07088.11 gi|91772834|ref|YP_565526.1| - 0.00042 19.1 0.2 0.00056 18.6 0.2 1.2 1 0 0 1 1 1 1 GvpD gas vesicle protein DUF3976 PF13121.6 gi|91772835|ref|YP_565527.1| - 0.0044 17.1 0.3 0.33 11.1 0.0 3.0 3 0 0 3 3 3 1 Domain of unknown function (DUF3976) Med16 PF11635.8 gi|91772835|ref|YP_565527.1| - 0.021 12.8 1.4 0.03 12.3 1.4 1.1 1 0 0 1 1 1 0 Mediator complex subunit 16 DUF5081 PF16887.5 gi|91772835|ref|YP_565527.1| - 0.15 11.1 3.1 1.2 8.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5081) DUF835 PF05763.12 gi|91772836|ref|YP_565528.1| - 1.9e-46 157.2 1.6 2e-46 157.1 0.3 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF835) PAS_9 PF13426.7 gi|91772836|ref|YP_565528.1| - 3.2e-12 46.6 2.6 4.5e-09 36.5 0.6 2.6 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|91772836|ref|YP_565528.1| - 1.7e-08 34.7 0.0 0.003 17.8 0.0 3.2 3 1 1 4 4 4 2 PAS fold PAS PF00989.25 gi|91772836|ref|YP_565528.1| - 9.8e-08 32.0 0.1 3.8e-06 26.9 0.1 3.1 2 1 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|91772836|ref|YP_565528.1| - 2.2e-06 27.5 0.9 4.1e-05 23.5 0.1 2.9 3 1 0 3 3 3 1 PAS domain PAS_7 PF12860.7 gi|91772836|ref|YP_565528.1| - 9.8e-06 25.7 0.6 0.031 14.4 0.0 4.0 3 1 0 3 3 3 1 PAS fold PAS_10 PF13596.6 gi|91772836|ref|YP_565528.1| - 0.00049 20.7 0.6 0.015 15.9 0.3 3.0 2 1 0 2 2 2 1 PAS domain SpoVT_C PF15714.5 gi|91772836|ref|YP_565528.1| - 0.012 15.7 0.2 0.027 14.5 0.2 1.6 1 0 0 1 1 1 0 Stage V sporulation protein T C-terminal, transcription factor MLTR_LBD PF17765.1 gi|91772836|ref|YP_565528.1| - 0.24 11.5 0.0 0.4 10.8 0.0 1.3 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain Response_reg PF00072.24 gi|91772837|ref|YP_565529.1| - 4.6e-30 104.1 0.5 8e-30 103.3 0.2 1.5 2 0 0 2 2 2 1 Response regulator receiver domain PAS_9 PF13426.7 gi|91772837|ref|YP_565529.1| - 7.1e-08 32.6 0.2 2e-07 31.2 0.1 1.8 2 1 1 3 3 3 1 PAS domain PAS PF00989.25 gi|91772837|ref|YP_565529.1| - 7.5e-08 32.4 0.0 1.8e-07 31.1 0.0 1.6 1 1 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|91772837|ref|YP_565529.1| - 0.00021 21.5 0.0 0.00038 20.7 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.12 gi|91772837|ref|YP_565529.1| - 0.0029 17.9 0.0 0.0076 16.5 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|91772837|ref|YP_565529.1| - 0.011 15.7 0.0 0.025 14.6 0.0 1.5 1 0 0 1 1 1 0 PAS domain PAS_11 PF14598.6 gi|91772837|ref|YP_565529.1| - 0.025 14.7 0.0 0.059 13.5 0.0 1.6 1 0 0 1 1 1 0 PAS domain DUF4030 PF13222.6 gi|91772837|ref|YP_565529.1| - 0.026 14.7 0.9 0.047 13.9 0.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4030) MFS_1 PF07690.16 gi|91772838|ref|YP_565530.1| - 6.2e-32 110.9 49.9 1.5e-19 70.2 20.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily SKI PF01202.22 gi|91772839|ref|YP_565531.1| - 3.4e-32 111.8 0.0 3.8e-32 111.6 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 gi|91772839|ref|YP_565531.1| - 4.5e-07 30.1 0.0 7.5e-07 29.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|91772839|ref|YP_565531.1| - 2.1e-06 27.6 0.0 2.8e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Cytidylate kinase AAA_17 PF13207.6 gi|91772839|ref|YP_565531.1| - 2.4e-06 28.0 0.7 8.4e-06 26.2 0.4 2.1 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 gi|91772839|ref|YP_565531.1| - 3e-06 27.5 0.5 3.8e-06 27.2 0.5 1.6 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|91772839|ref|YP_565531.1| - 7.9e-06 26.4 0.2 2.2e-05 25.0 0.2 1.9 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|91772839|ref|YP_565531.1| - 0.00027 20.8 1.1 0.093 12.6 0.1 2.1 2 0 0 2 2 2 2 Deoxynucleoside kinase ADK PF00406.22 gi|91772839|ref|YP_565531.1| - 0.00081 19.5 0.7 0.015 15.4 0.1 2.1 2 0 0 2 2 2 1 Adenylate kinase APS_kinase PF01583.20 gi|91772839|ref|YP_565531.1| - 0.0042 17.0 0.2 0.031 14.2 0.1 2.0 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA PF00004.29 gi|91772839|ref|YP_565531.1| - 0.0058 17.1 0.0 0.0095 16.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) CoaE PF01121.20 gi|91772839|ref|YP_565531.1| - 0.014 15.1 0.2 0.024 14.3 0.2 1.4 1 0 0 1 1 1 0 Dephospho-CoA kinase ABC_tran PF00005.27 gi|91772839|ref|YP_565531.1| - 0.034 14.6 0.1 0.073 13.6 0.1 1.5 1 0 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 gi|91772839|ref|YP_565531.1| - 0.041 14.3 0.0 0.069 13.5 0.0 1.4 1 0 0 1 1 1 0 RNA helicase Rad17 PF03215.15 gi|91772839|ref|YP_565531.1| - 0.044 13.7 0.0 0.071 13.0 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 gi|91772839|ref|YP_565531.1| - 0.051 13.8 0.0 0.076 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|91772839|ref|YP_565531.1| - 0.054 13.8 0.0 0.12 12.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|91772839|ref|YP_565531.1| - 0.056 13.2 0.4 0.082 12.6 0.1 1.6 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|91772839|ref|YP_565531.1| - 0.064 13.2 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase NB-ARC PF00931.22 gi|91772839|ref|YP_565531.1| - 0.065 12.4 0.2 0.11 11.6 0.1 1.4 2 0 0 2 2 2 0 NB-ARC domain PRK PF00485.18 gi|91772839|ref|YP_565531.1| - 0.14 11.9 1.7 0.95 9.2 0.1 2.1 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.6 gi|91772839|ref|YP_565531.1| - 0.16 12.3 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 gi|91772839|ref|YP_565531.1| - 0.16 11.9 0.1 0.33 11.0 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 gi|91772839|ref|YP_565531.1| - 0.34 10.7 2.1 0.44 10.3 0.8 1.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain DUF711 PF05167.12 gi|91772840|ref|YP_565532.1| - 4.3e-184 612.1 9.8 5.4e-184 611.8 9.8 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) DUF5402 PF17393.2 gi|91772840|ref|YP_565532.1| - 0.083 12.8 1.2 0.25 11.3 0.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5402) ACT_6 PF13740.6 gi|91772841|ref|YP_565533.1| - 2.3e-16 59.6 0.6 2.6e-16 59.4 0.6 1.0 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|91772841|ref|YP_565533.1| - 1.4e-07 31.1 1.2 2e-07 30.7 1.2 1.3 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|91772841|ref|YP_565533.1| - 0.00014 22.4 1.0 0.00023 21.7 1.0 1.4 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.6 gi|91772841|ref|YP_565533.1| - 0.011 15.4 0.7 0.018 14.8 0.7 1.3 1 0 0 1 1 1 0 ACT domain Fn3-like PF14310.6 gi|91772841|ref|YP_565533.1| - 0.15 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Fibronectin type III-like domain Na_Ca_ex PF01699.24 gi|91772843|ref|YP_565535.1| - 6e-52 175.6 33.3 1.6e-29 102.9 10.3 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Usp PF00582.26 gi|91772844|ref|YP_565536.1| - 4.9e-11 43.3 0.4 8e-11 42.6 0.4 1.3 1 1 0 1 1 1 1 Universal stress protein family Ncstrn_small PF18266.1 gi|91772844|ref|YP_565536.1| - 0.039 14.0 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 Nicastrin small lobe DAP_B PF07930.12 gi|91772844|ref|YP_565536.1| - 0.061 13.3 0.2 0.076 13.0 0.2 1.2 1 0 0 1 1 1 0 D-aminopeptidase, domain B VIT1 PF01988.19 gi|91772845|ref|YP_565537.1| - 1.3e-14 54.6 12.2 7.8e-09 35.7 0.7 2.0 1 1 1 2 2 2 2 VIT family DUF3159 PF11361.8 gi|91772845|ref|YP_565537.1| - 0.067 12.9 2.6 0.15 11.8 2.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3159) Response_reg PF00072.24 gi|91772846|ref|YP_565538.1| - 2.7e-19 69.4 0.3 3.3e-19 69.1 0.3 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Desulfoferrodox PF01880.18 gi|91772847|ref|YP_565539.1| - 2.2e-39 133.9 4.0 5.7e-33 113.4 0.9 2.1 1 1 1 2 2 2 2 Desulfoferrodoxin DUF737 PF05300.11 gi|91772847|ref|YP_565539.1| - 0.066 13.6 0.0 0.066 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) FtsX PF02687.21 gi|91772848|ref|YP_565540.1| - 0.019 15.4 4.1 0.028 14.9 4.1 1.2 1 0 0 1 1 1 0 FtsX-like permease family PalH PF08733.10 gi|91772848|ref|YP_565540.1| - 0.092 11.7 5.3 0.1 11.6 5.3 1.1 1 0 0 1 1 1 0 PalH/RIM21 AA_permease PF00324.21 gi|91772850|ref|YP_565542.1| - 8.9e-38 130.1 42.2 1.2e-37 129.6 42.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|91772850|ref|YP_565542.1| - 3.3e-22 78.9 45.3 4.6e-22 78.4 45.3 1.1 1 0 0 1 1 1 1 Amino acid permease B12-binding_2 PF02607.17 gi|91772851|ref|YP_565543.1| - 4.2e-22 78.4 0.5 8.5e-22 77.4 0.1 1.7 2 0 0 2 2 2 1 B12 binding domain B12-binding PF02310.19 gi|91772851|ref|YP_565543.1| - 1.7e-16 60.4 0.3 3.2e-16 59.5 0.3 1.4 1 0 0 1 1 1 1 B12 binding domain Response_reg PF00072.24 gi|91772852|ref|YP_565544.1| - 2.3e-23 82.5 0.1 2.7e-23 82.3 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain MRP-S24 PF14955.6 gi|91772852|ref|YP_565544.1| - 0.0098 15.9 0.0 0.18 11.8 0.0 2.1 1 1 1 2 2 2 1 Mitochondrial ribosome subunit S24 HisKA_2 PF07568.12 gi|91772853|ref|YP_565545.1| - 6.4e-28 96.7 1.8 1.9e-27 95.1 1.8 1.9 1 0 0 1 1 1 1 Histidine kinase dCache_1 PF02743.18 gi|91772853|ref|YP_565545.1| - 5.2e-22 78.8 4.7 5.3e-22 78.8 1.6 2.3 2 0 0 2 2 2 1 Cache domain PAS_3 PF08447.12 gi|91772853|ref|YP_565545.1| - 1.1e-15 57.6 0.6 2.5e-15 56.5 0.6 1.6 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|91772853|ref|YP_565545.1| - 1.9e-05 25.2 0.4 5.5e-05 23.6 0.4 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cache_3-Cache_2 PF17201.4 gi|91772853|ref|YP_565545.1| - 0.00042 19.7 1.4 0.00052 19.4 0.0 1.8 2 0 0 2 2 2 1 Cache 3/Cache 2 fusion domain HATPase_c_2 PF13581.6 gi|91772853|ref|YP_565545.1| - 0.00049 20.0 0.0 0.0012 18.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|91772853|ref|YP_565545.1| - 0.0049 17.5 0.1 0.013 16.2 0.1 1.7 1 0 0 1 1 1 1 HWE histidine kinase PAS_9 PF13426.7 gi|91772853|ref|YP_565545.1| - 0.015 15.5 0.1 0.057 13.7 0.1 2.1 1 0 0 1 1 1 0 PAS domain sCache_2 PF17200.4 gi|91772853|ref|YP_565545.1| - 0.017 15.0 0.0 0.055 13.3 0.0 1.8 1 0 0 1 1 1 0 Single Cache domain 2 PAS PF00989.25 gi|91772853|ref|YP_565545.1| - 0.017 15.1 0.0 0.056 13.5 0.0 2.0 1 0 0 1 1 1 0 PAS fold DUF1724 PF08350.10 gi|91772854|ref|YP_565546.1| - 1.1e-25 89.6 0.1 2.4e-25 88.4 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) DUF5581 PF17744.1 gi|91772854|ref|YP_565546.1| - 0.013 14.9 0.0 0.018 14.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5581) HTH_45 PF14947.6 gi|91772854|ref|YP_565546.1| - 0.017 15.1 0.2 0.065 13.2 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DUF4423 PF14394.6 gi|91772854|ref|YP_565546.1| - 0.028 14.1 0.0 0.075 12.7 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) HTH_34 PF13601.6 gi|91772854|ref|YP_565546.1| - 0.042 14.0 0.0 0.08 13.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain TrmB PF01978.19 gi|91772854|ref|YP_565546.1| - 0.054 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB FHIPEP PF00771.20 gi|91772854|ref|YP_565546.1| - 0.06 11.8 0.0 0.075 11.5 0.0 1.1 1 0 0 1 1 1 0 FHIPEP family HTH_5 PF01022.20 gi|91772854|ref|YP_565546.1| - 0.086 12.7 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF1724 PF08350.10 gi|91772855|ref|YP_565547.1| - 9.2e-24 83.4 0.2 1.9e-23 82.3 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) Herpes_UL92 PF03048.14 gi|91772855|ref|YP_565547.1| - 0.15 11.8 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 UL92 family B12-binding_2 PF02607.17 gi|91772856|ref|YP_565548.1| - 9.3e-22 77.3 0.4 2.1e-21 76.1 0.1 1.7 2 0 0 2 2 2 1 B12 binding domain B12-binding PF02310.19 gi|91772856|ref|YP_565548.1| - 1.5e-16 60.5 0.3 2.8e-16 59.7 0.3 1.4 1 0 0 1 1 1 1 B12 binding domain HTH_32 PF13565.6 gi|91772857|ref|YP_565549.1| - 4.4e-13 49.7 0.1 7.2e-13 48.9 0.1 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 gi|91772857|ref|YP_565549.1| - 7.6e-11 41.9 0.1 1.1e-10 41.4 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_33 PF13592.6 gi|91772857|ref|YP_565549.1| - 5.2e-09 35.6 0.3 1.3e-08 34.3 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 gi|91772857|ref|YP_565549.1| - 8.2e-09 35.5 1.5 1.3e-08 34.8 1.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|91772857|ref|YP_565549.1| - 2.8e-07 30.1 0.3 5.5e-07 29.2 0.3 1.5 1 0 0 1 1 1 1 Homeodomain-like domain LZ_Tnp_IS481 PF13011.6 gi|91772857|ref|YP_565549.1| - 6e-05 23.5 0.6 0.00014 22.3 0.2 1.7 1 1 1 2 2 2 1 leucine-zipper of insertion element IS481 DUF2407 PF10302.9 gi|91772857|ref|YP_565549.1| - 0.035 14.7 0.2 0.094 13.3 0.0 1.7 2 0 0 2 2 2 0 DUF2407 ubiquitin-like domain DUF89 PF01937.19 gi|91772858|ref|YP_565550.1| - 5.9e-53 180.1 0.0 6.7e-53 179.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 CooT PF10133.9 gi|91772859|ref|YP_565551.1| - 3.8e-20 71.9 4.6 4.2e-20 71.8 4.6 1.0 1 0 0 1 1 1 1 CO dehydrogenase accessory protein CooT bPH_6 PF10756.9 gi|91772859|ref|YP_565551.1| - 0.15 12.2 0.0 0.39 10.8 0.0 1.6 1 1 1 2 2 2 0 Bacterial PH domain Gp_dh_C PF02800.20 gi|91772860|ref|YP_565552.1| - 2.1e-29 102.1 0.0 3.6e-29 101.4 0.0 1.4 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|91772860|ref|YP_565552.1| - 1.7e-10 41.1 0.7 3e-10 40.3 0.7 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|91772860|ref|YP_565552.1| - 1.4e-06 28.6 1.2 8.8e-06 26.0 1.2 2.3 1 1 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|91772860|ref|YP_565552.1| - 6e-05 23.3 0.3 0.00015 22.0 0.1 1.8 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain IlvN PF07991.12 gi|91772860|ref|YP_565552.1| - 6.2e-05 22.6 0.3 0.027 14.0 0.1 2.3 1 1 1 2 2 2 2 Acetohydroxy acid isomeroreductase, NADPH-binding domain 2-Hacid_dh_C PF02826.19 gi|91772860|ref|YP_565552.1| - 0.00029 20.2 0.3 0.017 14.5 0.2 2.4 1 1 1 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|91772860|ref|YP_565552.1| - 0.022 15.4 0.2 0.068 13.8 0.2 1.9 1 1 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|91772860|ref|YP_565552.1| - 0.026 15.3 0.1 0.054 14.3 0.1 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold CoA_binding PF02629.19 gi|91772860|ref|YP_565552.1| - 0.063 14.0 2.1 0.32 11.7 2.1 2.1 1 1 0 1 1 1 0 CoA binding domain Semialdhyde_dh PF01118.24 gi|91772860|ref|YP_565552.1| - 0.072 13.5 0.1 0.17 12.3 0.1 1.7 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|91772860|ref|YP_565552.1| - 0.092 13.0 0.7 0.19 12.0 0.4 1.8 2 0 0 2 2 2 0 TrkA-N domain F420_oxidored PF03807.17 gi|91772860|ref|YP_565552.1| - 0.14 12.7 0.4 0.48 11.1 0.4 1.9 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Inositol_P PF00459.25 gi|91772861|ref|YP_565553.1| - 1.2e-31 110.3 0.0 1.4e-31 110.0 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|91772861|ref|YP_565553.1| - 6.1e-05 22.6 0.1 8.8e-05 22.1 0.1 1.2 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain FBPase_glpX PF03320.13 gi|91772861|ref|YP_565553.1| - 0.12 11.3 0.0 0.17 10.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NAD_kinase PF01513.21 gi|91772862|ref|YP_565554.1| - 1.7e-53 181.7 1.4 2e-53 181.5 1.4 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|91772862|ref|YP_565554.1| - 0.026 14.1 0.1 0.055 13.1 0.1 1.6 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain PK_C PF02887.16 gi|91772862|ref|YP_565554.1| - 0.055 13.7 0.1 2.6 8.3 0.0 2.9 3 0 0 3 3 3 0 Pyruvate kinase, alpha/beta domain HMGL-like PF00682.19 gi|91772863|ref|YP_565555.1| - 3.6e-79 266.0 4.3 5.1e-79 265.6 4.3 1.2 1 0 0 1 1 1 1 HMGL-like Spore_SspJ PF09575.10 gi|91772863|ref|YP_565555.1| - 0.2 12.1 0.1 0.7 10.3 0.1 2.0 1 0 0 1 1 1 0 Small spore protein J (Spore_SspJ) NYN PF01936.18 gi|91772864|ref|YP_565556.1| - 2.6e-25 89.6 0.0 3.5e-25 89.2 0.0 1.1 1 0 0 1 1 1 1 NYN domain Rhomboid PF01694.22 gi|91772866|ref|YP_565558.1| - 3.1e-36 124.7 17.4 4.3e-36 124.2 14.3 1.9 2 0 0 2 2 2 1 Rhomboid family zf-AN1 PF01428.16 gi|91772866|ref|YP_565558.1| - 1.1e-10 41.5 3.0 1.8e-10 40.8 3.0 1.3 1 0 0 1 1 1 1 AN1-like Zinc finger DUF1751 PF08551.10 gi|91772866|ref|YP_565558.1| - 5.7e-05 23.6 2.2 5.7e-05 23.6 2.2 2.8 2 1 0 3 3 3 1 Eukaryotic integral membrane protein (DUF1751) C5HCH PF17982.1 gi|91772866|ref|YP_565558.1| - 0.14 12.4 2.0 0.29 11.3 2.0 1.5 1 0 0 1 1 1 0 NSD Cys-His rich domain zf-C2H2_4 PF13894.6 gi|91772866|ref|YP_565558.1| - 3.9 8.6 6.8 2 9.5 2.8 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger Prismane PF03063.20 gi|91772867|ref|YP_565559.1| - 2.9e-121 405.7 0.4 3.2e-102 342.9 0.0 2.1 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_7 PF12838.7 gi|91772867|ref|YP_565559.1| - 1.9e-07 31.5 5.0 1.9e-07 31.5 5.0 2.4 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91772867|ref|YP_565559.1| - 2.5e-07 30.8 4.4 2.5e-07 30.8 4.4 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91772867|ref|YP_565559.1| - 3.8e-06 27.3 17.4 0.0015 19.1 0.4 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772867|ref|YP_565559.1| - 1.5e-05 25.0 21.8 0.00013 22.0 12.3 3.1 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91772867|ref|YP_565559.1| - 2.7e-05 23.8 22.9 5.3e-05 22.8 2.3 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91772867|ref|YP_565559.1| - 3.5e-05 23.8 20.2 0.00011 22.3 10.3 2.6 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91772867|ref|YP_565559.1| - 4.6e-05 23.8 0.6 0.014 15.8 0.1 2.8 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772867|ref|YP_565559.1| - 0.00044 20.2 23.0 0.0019 18.2 1.0 3.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91772867|ref|YP_565559.1| - 0.0017 19.2 7.3 0.34 11.9 0.4 3.2 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_20 PF14691.6 gi|91772867|ref|YP_565559.1| - 0.0018 18.1 6.5 0.12 12.1 0.2 2.6 1 1 1 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CODH_A_N PF18537.1 gi|91772867|ref|YP_565559.1| - 0.0018 18.3 0.0 0.012 15.6 0.0 2.4 2 0 0 2 2 2 1 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Fer4_4 PF12800.7 gi|91772867|ref|YP_565559.1| - 0.002 18.5 1.5 0.002 18.5 1.5 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|91772867|ref|YP_565559.1| - 0.0054 16.8 3.5 0.0054 16.8 3.5 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91772867|ref|YP_565559.1| - 0.061 13.5 8.9 0.74 10.0 2.0 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91772867|ref|YP_565559.1| - 0.69 10.5 10.2 0.99 10.0 1.8 2.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I CO_dh PF02552.16 gi|91772868|ref|YP_565560.1| - 5.9e-31 107.5 0.0 6.9e-31 107.3 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.22 gi|91772868|ref|YP_565560.1| - 4.9e-05 23.1 0.1 0.0001 22.0 0.1 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain ComA PF02679.15 gi|91772868|ref|YP_565560.1| - 0.079 12.4 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 (2R)-phospho-3-sulfolactate synthase (ComA) CdhC PF03598.15 gi|91772869|ref|YP_565561.1| - 7.5e-63 211.0 0.1 1.1e-62 210.6 0.1 1.2 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit PE_PPE_C PF12484.8 gi|91772869|ref|YP_565561.1| - 0.5 11.3 3.2 0.85 10.6 1.2 2.0 2 0 0 2 2 2 0 Polymorphic PE/PPE proteins C terminal CbiA PF01656.23 gi|91772870|ref|YP_565562.1| - 1.1e-17 64.3 0.1 2.3e-17 63.3 0.1 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|91772870|ref|YP_565562.1| - 3.5e-16 59.6 0.2 6.3e-16 58.8 0.2 1.4 1 1 0 1 1 1 1 AAA domain Fer4_NifH PF00142.18 gi|91772870|ref|YP_565562.1| - 2.1e-10 40.5 1.2 5.8e-10 39.1 1.2 1.6 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ParA PF10609.9 gi|91772870|ref|YP_565562.1| - 1.6e-09 37.6 2.1 9.6e-09 35.0 2.1 2.1 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 gi|91772870|ref|YP_565562.1| - 8.6e-09 35.2 0.1 9.2e-08 31.8 0.1 2.5 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|91772870|ref|YP_565562.1| - 6e-07 28.9 6.1 1.5e-05 24.4 6.1 2.7 1 1 1 2 2 2 1 Anion-transporting ATPase Toprim PF01751.22 gi|91772870|ref|YP_565562.1| - 2.2e-05 24.6 0.3 0.0021 18.3 0.1 2.4 2 1 0 2 2 2 1 Toprim domain Toprim_4 PF13662.6 gi|91772870|ref|YP_565562.1| - 0.00014 22.3 0.3 0.0032 17.9 0.1 2.4 2 0 0 2 2 2 1 Toprim domain AAA_24 PF13479.6 gi|91772870|ref|YP_565562.1| - 0.00019 21.2 0.3 0.00039 20.2 0.3 1.6 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|91772870|ref|YP_565562.1| - 0.00025 21.0 4.7 0.13 12.2 0.4 2.3 2 1 0 2 2 2 2 NTPase SRP54 PF00448.22 gi|91772870|ref|YP_565562.1| - 0.00046 19.9 2.6 0.44 10.1 0.1 2.3 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain AAA_16 PF13191.6 gi|91772870|ref|YP_565562.1| - 0.0017 18.8 0.0 0.0028 18.1 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain APS_kinase PF01583.20 gi|91772870|ref|YP_565562.1| - 0.0021 17.9 1.3 0.053 13.4 0.1 2.2 2 0 0 2 2 2 1 Adenylylsulphate kinase Toprim_2 PF13155.6 gi|91772870|ref|YP_565562.1| - 0.0057 17.0 0.3 5.2 7.6 0.0 2.3 2 0 0 2 2 2 0 Toprim-like ABC_tran PF00005.27 gi|91772870|ref|YP_565562.1| - 0.006 17.1 0.1 0.0087 16.6 0.1 1.7 1 1 0 1 1 1 1 ABC transporter MipZ PF09140.11 gi|91772870|ref|YP_565562.1| - 0.013 14.8 2.5 3.4 6.9 2.5 2.5 1 1 0 1 1 1 0 ATPase MipZ TrkA_N PF02254.18 gi|91772870|ref|YP_565562.1| - 0.019 15.2 2.0 8.7 6.6 0.1 3.1 2 1 1 3 3 3 0 TrkA-N domain ATP-synt_ab PF00006.25 gi|91772870|ref|YP_565562.1| - 0.022 14.4 0.0 0.063 12.9 0.0 1.7 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Zeta_toxin PF06414.12 gi|91772870|ref|YP_565562.1| - 0.027 13.8 0.1 0.065 12.5 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_7 PF12775.7 gi|91772870|ref|YP_565562.1| - 0.028 13.9 0.1 0.069 12.6 0.1 1.7 2 0 0 2 2 1 0 P-loop containing dynein motor region PIF1 PF05970.14 gi|91772870|ref|YP_565562.1| - 0.03 13.5 0.3 0.049 12.8 0.3 1.3 1 0 0 1 1 1 0 PIF1-like helicase PhoH PF02562.16 gi|91772870|ref|YP_565562.1| - 0.031 13.7 0.0 0.069 12.6 0.0 1.7 1 0 0 1 1 1 0 PhoH-like protein AAA_30 PF13604.6 gi|91772870|ref|YP_565562.1| - 0.037 13.8 0.0 0.054 13.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain DUF3372 PF11852.8 gi|91772870|ref|YP_565562.1| - 0.037 13.5 0.0 0.067 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3372) AAA_19 PF13245.6 gi|91772870|ref|YP_565562.1| - 0.038 14.3 3.1 0.052 13.9 0.3 2.4 2 1 1 3 3 3 0 AAA domain MeaB PF03308.16 gi|91772870|ref|YP_565562.1| - 0.04 12.9 1.1 0.1 11.6 0.1 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Rop-like PF05082.13 gi|91772870|ref|YP_565562.1| - 0.045 13.6 0.0 0.092 12.6 0.0 1.4 1 0 0 1 1 1 0 Rop-like AAA_25 PF13481.6 gi|91772870|ref|YP_565562.1| - 0.054 13.1 4.1 0.097 12.2 0.8 2.6 1 1 1 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|91772870|ref|YP_565562.1| - 0.074 13.1 0.2 0.21 11.6 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|91772870|ref|YP_565562.1| - 0.085 13.4 0.2 0.17 12.5 0.2 1.8 1 1 0 1 1 1 0 AAA domain Pox_A32 PF04665.12 gi|91772870|ref|YP_565562.1| - 0.09 12.2 0.0 7.4 5.9 0.0 2.4 2 0 0 2 2 2 0 Poxvirus A32 protein DUF4276 PF14103.6 gi|91772870|ref|YP_565562.1| - 0.092 13.0 0.0 0.17 12.1 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4276) MobB PF03205.14 gi|91772870|ref|YP_565562.1| - 0.11 12.4 0.3 0.39 10.6 0.1 2.0 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B RNA_helicase PF00910.22 gi|91772870|ref|YP_565562.1| - 0.15 12.5 0.0 1.1 9.7 0.0 2.2 2 0 0 2 2 2 0 RNA helicase PRK PF00485.18 gi|91772870|ref|YP_565562.1| - 0.18 11.5 0.8 0.53 10.0 0.8 1.9 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family CLP1_P PF16575.5 gi|91772870|ref|YP_565562.1| - 0.2 11.4 0.4 1.5 8.5 0.0 2.2 2 1 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_26 PF13500.6 gi|91772870|ref|YP_565562.1| - 0.23 11.3 5.4 1.1 9.0 0.4 2.5 2 1 0 2 2 2 0 AAA domain PDDEXK_10 PF07788.11 gi|91772870|ref|YP_565562.1| - 0.25 11.3 2.4 1.2 9.2 0.5 2.8 1 1 1 2 2 2 0 PD-(D/E)XK nuclease superfamily TsaE PF02367.17 gi|91772870|ref|YP_565562.1| - 0.3 11.1 1.1 0.6 10.1 1.1 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF87 PF01935.17 gi|91772870|ref|YP_565562.1| - 0.72 9.9 4.6 0.35 10.9 0.8 2.1 2 1 0 2 2 2 0 Helicase HerA, central domain CdhD PF03599.16 gi|91772871|ref|YP_565563.1| - 2.3e-87 293.2 2.6 9e-80 268.2 0.1 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit GDPD PF03009.17 gi|91772871|ref|YP_565563.1| - 0.066 12.9 0.1 0.1 12.3 0.1 1.2 1 0 0 1 1 1 0 Glycerophosphoryl diester phosphodiesterase family CdhD PF03599.16 gi|91772872|ref|YP_565564.1| - 4.2e-148 493.2 0.5 5e-148 492.9 0.5 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.13 gi|91772872|ref|YP_565564.1| - 3.1e-13 49.1 1.0 5.5e-13 48.3 1.0 1.4 1 0 0 1 1 1 1 Putative Fe-S cluster AXE1 PF05448.12 gi|91772873|ref|YP_565565.1| - 7.5e-07 28.1 0.0 2.2e-06 26.6 0.0 1.6 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Hydrolase_4 PF12146.8 gi|91772873|ref|YP_565565.1| - 5.8e-05 22.5 0.0 0.033 13.5 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 gi|91772873|ref|YP_565565.1| - 0.00055 19.5 0.0 0.00084 19.0 0.0 1.3 1 1 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 gi|91772873|ref|YP_565565.1| - 0.0012 18.8 0.0 0.0021 18.0 0.0 1.4 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 gi|91772873|ref|YP_565565.1| - 0.0023 17.4 0.0 0.01 15.3 0.0 2.1 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_7 PF12715.7 gi|91772873|ref|YP_565565.1| - 0.012 14.8 0.0 0.037 13.3 0.0 1.8 2 0 0 2 2 2 0 Abhydrolase family Chlorophyllase PF07224.11 gi|91772873|ref|YP_565565.1| - 0.062 12.3 0.1 0.18 10.8 0.1 1.6 1 1 0 1 1 1 0 Chlorophyllase Chlorophyllase2 PF12740.7 gi|91772873|ref|YP_565565.1| - 0.083 11.8 0.0 10 4.9 0.0 2.1 1 1 0 2 2 2 0 Chlorophyllase enzyme CobN-Mg_chel PF02514.16 gi|91772874|ref|YP_565566.1| - 0 1085.5 0.0 0 1084.0 0.0 1.7 2 1 0 2 2 2 1 CobN/Magnesium Chelatase CarboxypepD_reg PF13620.6 gi|91772874|ref|YP_565566.1| - 3.3e-20 72.1 11.5 1.4e-05 25.3 0.1 6.0 5 1 0 5 5 5 4 Carboxypeptidase regulatory-like domain SdrD_B PF17210.3 gi|91772874|ref|YP_565566.1| - 6.1e-17 61.9 14.0 0.00015 22.0 0.2 6.1 5 0 0 5 5 5 4 SdrD B-like domain CarbopepD_reg_2 PF13715.6 gi|91772874|ref|YP_565566.1| - 2.5e-11 43.4 11.7 0.012 15.6 0.2 5.6 5 0 0 5 5 5 3 CarboxypepD_reg-like domain DUF2012 PF09430.10 gi|91772874|ref|YP_565566.1| - 4.7e-11 42.9 0.4 0.095 12.8 0.0 4.8 4 0 0 4 4 4 3 Protein of unknown function (DUF2012) PKD PF00801.20 gi|91772874|ref|YP_565566.1| - 3.3e-09 36.5 0.2 1.3e-08 34.5 0.2 2.1 1 0 0 1 1 1 1 PKD domain SpaA PF17802.1 gi|91772874|ref|YP_565566.1| - 4.7e-08 33.2 13.0 0.23 11.8 0.2 5.4 4 1 0 4 4 4 3 Prealbumin-like fold domain bMG3 PF11974.8 gi|91772874|ref|YP_565566.1| - 4.4e-07 29.9 0.0 0.22 11.6 0.0 3.6 3 0 0 3 3 3 3 Bacterial alpha-2-macroglobulin MG3 domain fn3_3 PF14686.6 gi|91772874|ref|YP_565566.1| - 6.1e-05 22.7 14.5 0.16 11.8 2.8 5.6 5 0 0 5 5 5 2 Polysaccharide lyase family 4, domain II DUF1416 PF07210.12 gi|91772874|ref|YP_565566.1| - 0.0024 17.7 0.0 1.2 9.0 0.0 3.3 3 0 0 3 3 3 1 Protein of unknown function (DUF1416) DDE_Tnp_IS66 PF03050.14 gi|91772875|ref|YP_565567.1| - 2.5e-66 224.1 0.6 6.9e-66 222.6 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91772875|ref|YP_565567.1| - 8.9e-11 42.0 3.8 2.7e-10 40.5 3.8 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 SlyX PF04102.12 gi|91772875|ref|YP_565567.1| - 5.1e-05 23.8 0.7 0.00014 22.4 0.7 1.7 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91772875|ref|YP_565567.1| - 0.00016 21.9 0.5 0.16 12.2 0.2 2.7 3 0 0 3 3 3 2 DDE domain BST2 PF16716.5 gi|91772875|ref|YP_565567.1| - 0.06 13.9 1.4 0.3 11.7 1.4 2.3 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 GutM PF06923.11 gi|91772875|ref|YP_565567.1| - 0.1 12.7 0.2 3.3 7.9 0.0 2.6 2 0 0 2 2 2 0 Glucitol operon activator protein (GutM) DUF16 PF01519.16 gi|91772875|ref|YP_565567.1| - 0.12 12.9 2.7 0.55 10.7 0.3 2.6 2 0 0 2 2 2 0 Protein of unknown function DUF16 Zn_Tnp_IS1595 PF12760.7 gi|91772875|ref|YP_565567.1| - 0.14 12.2 2.7 0.83 9.7 0.8 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 gi|91772875|ref|YP_565567.1| - 0.51 10.7 7.5 1.1 9.7 5.6 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91772875|ref|YP_565567.1| - 0.54 11.0 8.1 5 7.9 1.0 3.6 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PLATZ PF04640.14 gi|91772875|ref|YP_565567.1| - 1.9 9.2 6.0 0.65 10.7 1.1 2.8 2 1 0 2 2 1 0 PLATZ transcription factor Pentapeptide PF00805.22 gi|91772876|ref|YP_565568.1| - 8.6e-21 73.2 27.7 1.7e-08 33.9 0.8 3.8 2 2 1 3 3 3 3 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|91772876|ref|YP_565568.1| - 1.9e-19 69.6 22.1 4.6e-10 39.5 6.5 2.3 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|91772876|ref|YP_565568.1| - 2.3e-14 53.3 13.7 2e-08 34.2 1.5 3.2 2 1 0 2 2 2 2 Pentapeptide repeats (9 copies) CfAFP PF05264.11 gi|91772876|ref|YP_565568.1| - 0.062 13.3 6.6 1.7 8.7 1.9 2.1 1 1 0 2 2 2 0 Choristoneura fumiferana antifreeze protein (CfAFP) Glyco_hydro_28 PF00295.17 gi|91772876|ref|YP_565568.1| - 2.7 7.0 6.8 9.1 5.2 0.1 2.8 1 1 1 3 3 3 0 Glycosyl hydrolases family 28 PolC_DP2 PF03833.13 gi|91772877|ref|YP_565569.1| - 0.00073 17.5 1.1 0.00088 17.3 1.1 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 HEPN_RES_NTD1 PF18870.1 gi|91772877|ref|YP_565569.1| - 0.066 13.4 0.8 0.077 13.2 0.8 1.1 1 0 0 1 1 1 0 HEPN/RES N-terminal domain 1 TF_Zn_Ribbon PF08271.12 gi|91772877|ref|YP_565569.1| - 0.15 11.6 6.6 0.46 10.0 6.3 1.9 1 1 1 2 2 2 0 TFIIB zinc-binding Zn_ribbon_17 PF17120.5 gi|91772877|ref|YP_565569.1| - 0.22 11.2 4.4 0.55 9.9 4.4 1.7 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type DDE_Tnp_1 PF01609.21 gi|91772878|ref|YP_565570.1| - 3.4e-07 30.1 2.0 5.8e-07 29.4 2.0 1.4 1 0 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.11 gi|91772878|ref|YP_565570.1| - 0.0077 16.2 0.0 0.035 14.1 0.0 2.2 2 1 0 2 2 2 1 Transposase domain (DUF772) DUF4283 PF14111.6 gi|91772878|ref|YP_565570.1| - 0.065 12.7 0.1 0.14 11.6 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) CPSase_sm_chain PF00988.22 gi|91772879|ref|YP_565571.1| - 1.2e-46 157.7 0.1 1.8e-46 157.1 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|91772879|ref|YP_565571.1| - 9.4e-42 142.9 0.0 1.4e-41 142.4 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|91772879|ref|YP_565571.1| - 1.9e-06 27.8 0.5 0.0011 18.7 0.5 2.3 1 1 0 1 1 1 1 Peptidase C26 CPSase_L_D2 PF02786.17 gi|91772880|ref|YP_565572.1| - 7.5e-106 352.3 1.3 2.1e-70 236.5 0.1 2.4 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|91772880|ref|YP_565572.1| - 2.1e-39 134.6 0.0 5.4e-39 133.3 0.0 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 gi|91772880|ref|YP_565572.1| - 3.8e-21 75.1 1.4 9.1e-20 70.7 0.0 3.7 5 0 0 5 5 5 1 MGS-like domain ATP-grasp PF02222.22 gi|91772880|ref|YP_565572.1| - 1.3e-17 63.9 0.1 1.2e-09 37.9 0.0 2.5 2 0 0 2 2 2 2 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|91772880|ref|YP_565572.1| - 2.9e-15 56.2 0.0 2.5e-06 27.3 0.0 2.8 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.13 gi|91772880|ref|YP_565572.1| - 8.8e-15 54.8 0.1 4.9e-06 26.2 0.1 2.5 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 gi|91772880|ref|YP_565572.1| - 2.9e-13 50.2 0.6 9.2e-06 25.8 0.0 2.5 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|91772880|ref|YP_565572.1| - 0.0024 17.5 0.1 6.6 6.2 0.0 3.8 3 1 0 3 3 3 2 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|91772880|ref|YP_565572.1| - 0.0043 16.5 0.0 0.26 10.7 0.0 3.0 3 0 0 3 3 3 1 ATP-grasp domain MerR-DNA-bind PF09278.11 gi|91772880|ref|YP_565572.1| - 0.012 16.2 0.5 3.8 8.1 0.0 4.0 4 0 0 4 4 4 0 MerR, DNA binding Epimerase PF01370.21 gi|91772880|ref|YP_565572.1| - 0.079 12.4 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Arginosuc_synth PF00764.19 gi|91772881|ref|YP_565573.1| - 6.2e-175 582.1 0.1 7.2e-175 581.9 0.1 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|91772881|ref|YP_565573.1| - 0.0042 16.6 0.0 0.013 15.0 0.0 1.7 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|91772881|ref|YP_565573.1| - 0.0046 16.1 0.0 0.0081 15.3 0.0 1.4 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.21 gi|91772881|ref|YP_565573.1| - 0.036 13.7 0.0 0.054 13.2 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase tRNA_Me_trans PF03054.16 gi|91772881|ref|YP_565573.1| - 0.05 12.4 0.0 0.081 11.7 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase ROQ_II PF18386.1 gi|91772881|ref|YP_565573.1| - 0.059 13.2 0.5 1.3 9.0 0.0 2.7 3 0 0 3 3 3 0 Roquin II domain GHMP_kinases_N PF00288.26 gi|91772882|ref|YP_565574.1| - 7.2e-13 48.6 1.6 2.2e-12 47.0 1.2 2.0 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|91772882|ref|YP_565574.1| - 0.023 15.0 0.1 0.078 13.3 0.0 1.9 2 0 0 2 2 2 0 GHMP kinases C terminal CM_2 PF01817.21 gi|91772883|ref|YP_565575.1| - 1e-15 57.8 2.5 1.2e-15 57.6 2.5 1.0 1 0 0 1 1 1 1 Chorismate mutase type II AIRC PF00731.20 gi|91772884|ref|YP_565576.1| - 8.5e-46 155.2 1.9 9.3e-46 155.1 1.9 1.0 1 0 0 1 1 1 1 AIR carboxylase MetOD1 PF18546.1 gi|91772885|ref|YP_565577.1| - 8.8e-50 168.7 1.2 1.3e-49 168.2 1.2 1.2 1 0 0 1 1 1 1 Metanogen output domain 1 Response_reg PF00072.24 gi|91772885|ref|YP_565577.1| - 2e-28 98.8 1.4 3.7e-28 97.9 0.5 1.9 2 0 0 2 2 2 1 Response regulator receiver domain Baculo_E56 PF04639.12 gi|91772885|ref|YP_565577.1| - 0.0047 16.3 0.1 0.0074 15.6 0.1 1.4 1 0 0 1 1 1 1 Baculoviral E56 protein, specific to ODV envelope ATC_hydrolase PF14196.6 gi|91772885|ref|YP_565577.1| - 0.014 16.1 0.2 0.033 15.0 0.2 1.8 1 0 0 1 1 1 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase ATPase PF06745.13 gi|91772886|ref|YP_565578.1| - 1.9e-47 161.6 0.4 2.1e-47 161.4 0.4 1.0 1 0 0 1 1 1 1 KaiC RecA PF00154.21 gi|91772886|ref|YP_565578.1| - 2.5e-06 27.1 0.0 3.6e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein DnaB_C PF03796.15 gi|91772886|ref|YP_565578.1| - 9.7e-06 25.1 0.0 1.8e-05 24.2 0.0 1.4 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain GvpD PF07088.11 gi|91772886|ref|YP_565578.1| - 9.3e-05 21.2 0.3 0.0004 19.1 0.3 1.8 1 1 0 1 1 1 1 GvpD gas vesicle protein AAA_25 PF13481.6 gi|91772886|ref|YP_565578.1| - 0.00081 19.0 0.0 0.0011 18.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 gi|91772886|ref|YP_565578.1| - 0.0055 16.0 0.0 0.0088 15.3 0.0 1.4 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) Rad51 PF08423.11 gi|91772886|ref|YP_565578.1| - 0.0056 16.0 0.1 0.0092 15.3 0.1 1.4 1 0 0 1 1 1 1 Rad51 AAA_24 PF13479.6 gi|91772886|ref|YP_565578.1| - 0.0097 15.6 0.1 0.02 14.6 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|91772886|ref|YP_565578.1| - 0.11 13.1 0.0 0.16 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|91772886|ref|YP_565578.1| - 0.14 12.5 0.6 0.63 10.3 0.6 2.0 1 1 0 1 1 1 0 AAA domain Lon_C PF05362.13 gi|91772887|ref|YP_565579.1| - 7.1e-32 110.6 4.7 1.2e-31 109.8 4.7 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.6 gi|91772887|ref|YP_565579.1| - 5.8e-29 101.3 0.1 1.6e-20 73.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|91772887|ref|YP_565579.1| - 1.1e-17 64.2 0.1 6.1e-11 42.1 0.1 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|91772887|ref|YP_565579.1| - 2.4e-15 56.6 0.1 2.5e-08 33.8 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_5 PF07728.14 gi|91772887|ref|YP_565579.1| - 2.7e-12 46.8 0.0 7.4e-05 22.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) ChlI PF13541.6 gi|91772887|ref|YP_565579.1| - 2.5e-10 40.3 0.5 5.9e-10 39.0 0.5 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA PF00004.29 gi|91772887|ref|YP_565579.1| - 4.3e-08 33.7 0.0 0.007 16.8 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|91772887|ref|YP_565579.1| - 1.8e-07 30.5 1.7 0.054 12.6 0.0 3.6 4 0 0 4 4 4 2 MCM P-loop domain RuvB_N PF05496.12 gi|91772887|ref|YP_565579.1| - 1.7e-05 24.6 0.0 0.014 15.1 0.0 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|91772887|ref|YP_565579.1| - 4.4e-05 23.8 0.0 0.0016 18.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_3 PF07726.11 gi|91772887|ref|YP_565579.1| - 5.7e-05 23.0 0.0 0.33 10.8 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|91772887|ref|YP_565579.1| - 7.3e-05 22.3 0.0 0.00054 19.5 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_19 PF13245.6 gi|91772887|ref|YP_565579.1| - 7.5e-05 23.1 0.8 0.0022 18.3 0.8 2.9 1 1 0 1 1 1 1 AAA domain Sigma54_activ_2 PF14532.6 gi|91772887|ref|YP_565579.1| - 0.00023 21.3 0.0 0.85 9.7 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 gi|91772887|ref|YP_565579.1| - 0.0018 18.0 0.0 0.0098 15.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|91772887|ref|YP_565579.1| - 0.0045 17.4 0.0 0.18 12.2 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain PhoH PF02562.16 gi|91772887|ref|YP_565579.1| - 0.0048 16.4 0.0 0.012 15.0 0.0 1.6 1 0 0 1 1 1 1 PhoH-like protein Parvo_NS1 PF01057.17 gi|91772887|ref|YP_565579.1| - 0.0052 15.9 0.0 0.0092 15.1 0.0 1.3 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 T2SSE PF00437.20 gi|91772887|ref|YP_565579.1| - 0.012 14.7 0.0 0.054 12.5 0.0 2.0 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_33 PF13671.6 gi|91772887|ref|YP_565579.1| - 0.017 15.3 0.0 0.037 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|91772887|ref|YP_565579.1| - 0.02 14.6 0.0 0.082 12.6 0.0 2.0 3 0 0 3 3 2 0 IstB-like ATP binding protein AAA_18 PF13238.6 gi|91772887|ref|YP_565579.1| - 0.022 15.3 0.0 0.054 14.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|91772887|ref|YP_565579.1| - 0.03 14.9 0.0 0.088 13.3 0.0 1.8 1 0 0 1 1 1 0 ABC transporter DUF815 PF05673.13 gi|91772887|ref|YP_565579.1| - 0.04 13.1 0.0 0.079 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_2 PF07724.14 gi|91772887|ref|YP_565579.1| - 0.047 13.8 0.2 11 6.1 0.0 2.8 2 1 0 2 2 2 0 AAA domain (Cdc48 subfamily) FtsK_SpoIIIE PF01580.18 gi|91772887|ref|YP_565579.1| - 0.049 13.0 0.0 0.14 11.5 0.0 1.7 1 0 0 1 1 1 0 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.9 gi|91772887|ref|YP_565579.1| - 0.053 12.4 0.0 0.11 11.4 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_28 PF13521.6 gi|91772887|ref|YP_565579.1| - 0.055 13.7 0.0 0.15 12.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain Styelin PF17562.2 gi|91772887|ref|YP_565579.1| - 0.057 13.8 0.0 0.3 11.5 0.0 2.2 2 0 0 2 2 1 0 Styelin NACHT PF05729.12 gi|91772887|ref|YP_565579.1| - 0.069 13.1 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 NACHT domain DUF1676 PF07898.13 gi|91772887|ref|YP_565579.1| - 0.14 12.2 1.0 0.34 10.9 1.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) PmbA_TldD PF01523.16 gi|91772888|ref|YP_565580.1| - 2.9e-68 230.7 0.2 4.1e-68 230.2 0.2 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|91772889|ref|YP_565581.1| - 9.1e-50 170.0 2.4 1.2e-49 169.7 2.4 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Response_reg PF00072.24 gi|91772890|ref|YP_565582.1| - 9.2e-21 74.1 0.1 1.6e-20 73.3 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain PAS_9 PF13426.7 gi|91772890|ref|YP_565582.1| - 8.8e-13 48.4 0.1 1.6e-12 47.6 0.1 1.5 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 gi|91772890|ref|YP_565582.1| - 2.6e-11 43.5 0.0 4.1e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|91772890|ref|YP_565582.1| - 2.4e-07 31.0 0.0 3.3e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|91772890|ref|YP_565582.1| - 0.00015 21.7 0.0 0.00041 20.3 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS_10 PF13596.6 gi|91772890|ref|YP_565582.1| - 0.013 16.1 0.0 0.026 15.1 0.0 1.5 1 0 0 1 1 1 0 PAS domain Peptidase_S8 PF00082.22 gi|91772891|ref|YP_565583.1| - 4e-41 141.2 5.7 4e-41 141.2 5.7 2.9 2 1 0 2 2 1 1 Subtilase family Big_3_3 PF13750.6 gi|91772891|ref|YP_565583.1| - 3e-33 114.7 50.6 0.00074 19.2 0.4 13.0 13 0 0 13 13 13 9 Bacterial Ig-like domain (group 3) PKD PF00801.20 gi|91772891|ref|YP_565583.1| - 4.4e-22 77.7 50.3 5.4e-09 35.8 1.6 10.2 10 0 0 10 10 10 3 PKD domain LIFR_N PF18207.1 gi|91772891|ref|YP_565583.1| - 1.9e-19 69.8 10.8 0.063 13.7 0.0 9.1 11 0 0 11 11 10 5 Leukemia inhibitory factor receptor N-terminal domain DUF2057 PF09829.9 gi|91772891|ref|YP_565583.1| - 2.4e-19 70.3 11.0 0.18 11.9 0.0 10.3 10 0 0 10 10 10 5 Uncharacterized protein conserved in bacteria (DUF2057) Big_3_4 PF13754.6 gi|91772891|ref|YP_565583.1| - 6.8e-14 51.5 8.5 6.8 6.5 0.0 10.6 6 1 4 10 10 10 4 Domain of unknown function fn3 PF00041.21 gi|91772891|ref|YP_565583.1| - 3.3e-07 30.6 26.6 0.054 13.8 1.5 6.5 5 1 0 5 5 5 3 Fibronectin type III domain HYR PF02494.16 gi|91772891|ref|YP_565583.1| - 3.4e-07 30.5 49.3 6.5 7.2 0.0 12.9 14 0 0 14 14 13 4 HYR domain Y_Y_Y PF07495.13 gi|91772891|ref|YP_565583.1| - 0.056 13.4 26.6 11 6.1 0.2 8.9 8 0 0 8 8 8 0 Y_Y_Y domain DUF2271 PF10029.9 gi|91772891|ref|YP_565583.1| - 0.078 12.6 6.2 1.7e+02 1.8 0.0 6.8 8 0 0 8 8 8 0 Predicted periplasmic protein (DUF2271) PKD_3 PF16820.5 gi|91772891|ref|YP_565583.1| - 1.3 8.8 6.5 4.3 7.1 0.2 4.9 4 0 0 4 4 4 0 PKD-like domain YebF PF13995.6 gi|91772891|ref|YP_565583.1| - 3.2 7.8 10.8 49 4.0 0.1 5.0 5 0 0 5 5 5 0 YebF-like protein E1-E2_ATPase PF00122.20 gi|91772892|ref|YP_565584.1| - 2.4e-50 170.6 4.4 2.4e-50 170.6 4.4 3.7 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|91772892|ref|YP_565584.1| - 6.4e-37 127.0 13.1 6.4e-37 127.0 13.1 2.3 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|91772892|ref|YP_565584.1| - 1.5e-22 81.0 0.2 3.4e-22 79.8 0.2 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|91772892|ref|YP_565584.1| - 2.5e-18 65.5 0.0 7.3e-18 64.0 0.0 1.9 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 gi|91772892|ref|YP_565584.1| - 2.6e-10 40.2 0.0 9.4e-10 38.5 0.0 1.9 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|91772892|ref|YP_565584.1| - 4.9e-08 33.0 2.4 2.3e-05 24.3 1.1 2.6 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|91772892|ref|YP_565584.1| - 0.058 13.8 0.0 0.17 12.3 0.0 1.8 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase DUF2809 PF10990.8 gi|91772892|ref|YP_565584.1| - 1.1 10.0 5.0 0.37 11.5 1.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2809) LysE PF01810.18 gi|91772895|ref|YP_565587.1| - 8.8e-25 87.3 16.6 1e-24 87.1 16.6 1.0 1 0 0 1 1 1 1 LysE type translocator DUF5362 PF17319.2 gi|91772895|ref|YP_565587.1| - 0.014 15.2 2.9 0.014 15.2 2.9 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF5362) TPP_enzyme_C PF02775.21 gi|91772896|ref|YP_565588.1| - 6.9e-30 103.9 0.0 1e-29 103.3 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|91772896|ref|YP_565588.1| - 1.6e-28 98.6 0.0 2.6e-28 97.9 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal G3P_antiterm PF04309.12 gi|91772896|ref|YP_565588.1| - 0.14 11.5 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator POR_N PF01855.19 gi|91772897|ref|YP_565589.1| - 1.3e-60 205.0 0.3 1.9e-60 204.5 0.3 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|91772897|ref|YP_565589.1| - 1.9e-38 132.3 0.9 7.5e-38 130.4 0.4 2.1 2 1 0 2 2 2 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Transketolase_C PF02780.20 gi|91772897|ref|YP_565589.1| - 1.7e-06 27.9 0.0 4.3e-06 26.6 0.0 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain PFOR_II PF17147.4 gi|91772897|ref|YP_565589.1| - 8.3e-06 26.1 0.0 2.1e-05 24.8 0.0 1.8 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|91772897|ref|YP_565589.1| - 0.0029 17.2 1.0 0.0053 16.4 1.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Glyoxalase_6 PF18029.1 gi|91772898|ref|YP_565590.1| - 1.5e-06 29.0 0.0 1.8e-06 28.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|91772898|ref|YP_565590.1| - 0.0001 22.5 0.0 0.00022 21.4 0.0 1.7 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DDE_Tnp_1 PF01609.21 gi|91772899|ref|YP_565591.1| - 0.0001 22.0 0.0 0.00018 21.2 0.0 1.4 1 0 0 1 1 1 1 Transposase DDE domain CARDB PF07705.11 gi|91772900|ref|YP_565592.1| - 2.9e-14 53.2 6.1 0.00049 20.3 0.0 3.3 3 0 0 3 3 3 3 CARDB TRAP_alpha PF03896.16 gi|91772900|ref|YP_565592.1| - 0.00014 21.1 0.0 0.00032 20.0 0.0 1.5 1 0 0 1 1 1 1 Translocon-associated protein (TRAP), alpha subunit DUF4366 PF14283.6 gi|91772900|ref|YP_565592.1| - 0.00038 20.5 1.0 1 9.4 0.2 2.6 3 0 0 3 3 3 2 Domain of unknown function (DUF4366) DUF2393 PF09624.10 gi|91772900|ref|YP_565592.1| - 0.0048 16.9 12.8 1.3 9.0 0.0 4.7 3 1 2 5 5 5 2 Protein of unknown function (DUF2393) Arrestin_C PF02752.22 gi|91772900|ref|YP_565592.1| - 0.038 14.4 3.7 0.4 11.1 0.4 3.2 2 1 1 3 3 3 0 Arrestin (or S-antigen), C-terminal domain NPCBM_assoc PF10633.9 gi|91772900|ref|YP_565592.1| - 0.039 14.2 0.0 3.5 8.0 0.0 2.8 3 1 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF1573 PF07610.11 gi|91772900|ref|YP_565592.1| - 0.11 12.6 0.3 21 5.2 0.0 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1573) Acylphosphatase PF00708.18 gi|91772900|ref|YP_565592.1| - 0.16 12.4 0.0 0.63 10.5 0.0 2.1 1 0 0 1 1 1 0 Acylphosphatase DUF11 PF01345.18 gi|91772900|ref|YP_565592.1| - 0.17 12.2 0.9 21 5.5 0.2 3.2 3 0 0 3 3 3 0 Domain of unknown function DUF11 TRAP_beta PF05753.14 gi|91772900|ref|YP_565592.1| - 0.17 11.2 0.7 4.9 6.5 0.1 2.4 2 0 0 2 2 2 0 Translocon-associated protein beta (TRAPB) FtsX PF02687.21 gi|91772901|ref|YP_565593.1| - 5.2e-07 30.0 2.5 5.2e-07 30.0 2.5 2.8 3 0 0 3 3 3 1 FtsX-like permease family DUF5438 PF17506.2 gi|91772901|ref|YP_565593.1| - 1.3 9.4 5.0 0.78 10.1 0.6 2.7 2 1 0 2 2 2 0 Family of unknown function (DUF5438) ABC_tran PF00005.27 gi|91772902|ref|YP_565594.1| - 5.8e-37 127.3 0.0 7.8e-37 126.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|91772902|ref|YP_565594.1| - 1.1e-08 34.8 0.1 6.1e-08 32.4 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|91772902|ref|YP_565594.1| - 3.6e-07 30.3 0.2 0.0032 17.3 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|91772902|ref|YP_565594.1| - 8e-06 25.8 0.3 0.0055 16.5 0.1 2.1 1 1 1 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|91772902|ref|YP_565594.1| - 0.00012 21.8 0.1 0.00023 20.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|91772902|ref|YP_565594.1| - 0.00015 21.4 0.0 0.015 14.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain RNA12 PF10443.9 gi|91772902|ref|YP_565594.1| - 0.00015 20.6 0.0 0.00021 20.2 0.0 1.1 1 0 0 1 1 1 1 RNA12 protein RsgA_GTPase PF03193.16 gi|91772902|ref|YP_565594.1| - 0.00051 20.0 0.1 0.0013 18.6 0.0 1.8 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 gi|91772902|ref|YP_565594.1| - 0.0014 18.9 0.1 0.0046 17.2 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|91772902|ref|YP_565594.1| - 0.002 18.6 0.5 0.068 13.7 0.1 2.2 1 1 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|91772902|ref|YP_565594.1| - 0.0021 18.6 0.5 0.0041 17.7 0.5 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|91772902|ref|YP_565594.1| - 0.0039 17.6 0.1 0.0051 17.2 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 gi|91772902|ref|YP_565594.1| - 0.0094 15.7 0.2 0.12 12.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 gi|91772902|ref|YP_565594.1| - 0.015 15.3 0.0 0.046 13.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|91772902|ref|YP_565594.1| - 0.016 14.3 0.0 0.023 13.8 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_33 PF13671.6 gi|91772902|ref|YP_565594.1| - 0.018 15.2 0.1 0.023 14.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|91772902|ref|YP_565594.1| - 0.024 14.9 0.1 0.18 12.1 0.1 2.1 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.20 gi|91772902|ref|YP_565594.1| - 0.037 13.2 0.1 0.079 12.1 0.1 1.7 1 1 0 1 1 1 0 G-protein alpha subunit MMR_HSR1 PF01926.23 gi|91772902|ref|YP_565594.1| - 0.045 13.8 0.7 0.18 11.9 0.7 2.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase NACHT PF05729.12 gi|91772902|ref|YP_565594.1| - 0.06 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 NACHT domain ATPase PF06745.13 gi|91772902|ref|YP_565594.1| - 0.061 12.7 0.1 2 7.7 0.0 2.2 2 0 0 2 2 2 0 KaiC SbcCD_C PF13558.6 gi|91772902|ref|YP_565594.1| - 0.079 13.2 0.5 0.56 10.5 0.5 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit cobW PF02492.19 gi|91772902|ref|YP_565594.1| - 0.088 12.4 0.1 0.22 11.1 0.1 1.6 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Hydant_A_N PF05378.13 gi|91772904|ref|YP_565596.1| - 3.9e-33 114.7 6.0 1.6e-28 99.6 3.0 3.3 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|91772904|ref|YP_565596.1| - 2.2e-32 112.5 2.6 1.4e-30 106.6 0.0 2.8 3 0 0 3 3 3 2 Hydantoinase/oxoprolinase MutL PF13941.6 gi|91772904|ref|YP_565596.1| - 9.3e-09 34.4 3.2 0.00053 18.7 0.5 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|91772904|ref|YP_565596.1| - 0.0032 17.0 1.6 0.066 12.7 0.1 2.8 3 0 0 3 3 3 1 BadF/BadG/BcrA/BcrD ATPase family Arch_flagellin PF01917.16 gi|91772904|ref|YP_565596.1| - 0.0032 17.7 0.0 0.0076 16.4 0.0 1.6 1 0 0 1 1 1 1 Archaebacterial flagellin StbA PF06406.11 gi|91772904|ref|YP_565596.1| - 0.056 12.7 0.3 0.16 11.2 0.1 1.8 2 0 0 2 2 2 0 StbA protein TGT PF01702.18 gi|91772904|ref|YP_565596.1| - 0.13 11.4 0.1 0.35 10.0 0.0 1.6 2 0 0 2 2 2 0 Queuine tRNA-ribosyltransferase FGGY_N PF00370.21 gi|91772904|ref|YP_565596.1| - 0.14 11.7 0.5 2.4 7.7 0.5 2.5 1 1 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain Hydantoinase_A PF01968.18 gi|91772905|ref|YP_565597.1| - 4.4e-31 108.2 0.9 4.2e-30 105.0 0.1 2.6 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|91772905|ref|YP_565597.1| - 1.9e-29 102.6 0.2 8.5e-25 87.5 0.0 3.4 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|91772905|ref|YP_565597.1| - 2.5e-06 26.4 0.3 0.043 12.4 0.0 2.2 2 0 0 2 2 2 2 MutL protein Sda PF08970.10 gi|91772905|ref|YP_565597.1| - 0.04 13.7 0.1 0.094 12.5 0.1 1.6 1 0 0 1 1 1 0 Sporulation inhibitor A ROK PF00480.20 gi|91772905|ref|YP_565597.1| - 0.063 12.7 0.1 0.16 11.4 0.0 1.7 2 0 0 2 2 2 0 ROK family StbA PF06406.11 gi|91772905|ref|YP_565597.1| - 0.097 11.9 0.0 0.19 10.9 0.0 1.4 1 0 0 1 1 1 0 StbA protein GCV_H PF01597.19 gi|91772905|ref|YP_565597.1| - 0.13 12.2 0.0 1.9 8.4 0.0 2.5 2 0 0 2 2 2 0 Glycine cleavage H-protein Endopep_inhib PF16800.5 gi|91772905|ref|YP_565597.1| - 0.13 12.2 0.0 0.41 10.6 0.0 1.8 2 0 0 2 2 2 0 IseA DL-endopeptidase inhibitor BcrAD_BadFG PF01869.20 gi|91772905|ref|YP_565597.1| - 0.52 9.8 1.8 6.8 6.1 1.7 2.4 1 1 1 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family MTS PF05175.14 gi|91772906|ref|YP_565598.1| - 1.4e-07 31.3 0.0 1.1e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|91772906|ref|YP_565598.1| - 4.5e-06 26.5 0.0 6.3e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91772906|ref|YP_565598.1| - 6.1e-06 26.9 0.0 1.4e-05 25.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|91772906|ref|YP_565598.1| - 0.00048 19.9 0.0 0.00077 19.3 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 gi|91772906|ref|YP_565598.1| - 0.00084 19.2 0.0 0.0022 17.9 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|91772906|ref|YP_565598.1| - 0.00097 19.7 0.0 0.003 18.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91772906|ref|YP_565598.1| - 0.0071 17.1 0.0 0.015 16.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain UPF0146 PF03686.13 gi|91772906|ref|YP_565598.1| - 0.011 15.7 0.2 0.017 15.0 0.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) Methyltransf_16 PF10294.9 gi|91772906|ref|YP_565598.1| - 0.014 15.1 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase MetW PF07021.12 gi|91772906|ref|YP_565598.1| - 0.019 14.6 0.0 0.037 13.6 0.0 1.4 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|91772906|ref|YP_565598.1| - 0.027 13.8 0.0 0.16 11.2 0.0 1.9 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase DREV PF05219.12 gi|91772906|ref|YP_565598.1| - 0.06 12.4 0.0 0.085 11.9 0.0 1.1 1 0 0 1 1 1 0 DREV methyltransferase Methyltransf_24 PF13578.6 gi|91772906|ref|YP_565598.1| - 0.088 13.8 0.0 0.64 11.1 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 gi|91772906|ref|YP_565598.1| - 0.12 11.4 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase RrnaAD PF00398.20 gi|91772907|ref|YP_565599.1| - 8.6e-57 192.2 0.1 1.1e-56 191.9 0.1 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|91772907|ref|YP_565599.1| - 6e-07 30.1 0.0 2.1e-06 28.3 0.0 1.9 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91772907|ref|YP_565599.1| - 4.2e-05 24.2 0.0 0.00023 21.8 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|91772907|ref|YP_565599.1| - 8.6e-05 23.1 0.0 0.00027 21.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Spermine_synth PF01564.17 gi|91772907|ref|YP_565599.1| - 0.0049 16.3 0.1 0.0084 15.5 0.1 1.3 1 0 0 1 1 1 1 Spermine/spermidine synthase domain NodS PF05401.11 gi|91772907|ref|YP_565599.1| - 0.009 15.6 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Met_10 PF02475.16 gi|91772907|ref|YP_565599.1| - 0.0094 15.7 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_2 PF00891.18 gi|91772907|ref|YP_565599.1| - 0.012 14.9 0.0 0.021 14.1 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain Methyltransf_23 PF13489.6 gi|91772907|ref|YP_565599.1| - 0.021 14.7 0.0 0.025 14.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 gi|91772907|ref|YP_565599.1| - 0.027 14.0 0.0 0.051 13.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_PK PF05891.12 gi|91772907|ref|YP_565599.1| - 0.029 13.9 0.0 0.046 13.2 0.0 1.3 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase DUF655 PF04919.12 gi|91772908|ref|YP_565600.1| - 2.3e-65 219.9 0.1 2.6e-65 219.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|91772908|ref|YP_565600.1| - 0.00013 22.1 0.0 0.00019 21.6 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|91772908|ref|YP_565600.1| - 0.0014 18.9 0.0 0.0029 17.8 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|91772908|ref|YP_565600.1| - 0.12 13.0 0.2 1.9 9.1 0.1 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix domain RNA_pol_Rpb4 PF03874.16 gi|91772909|ref|YP_565601.1| - 4.3e-10 40.0 1.3 7e-10 39.3 1.3 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb4 CRR7 PF12095.8 gi|91772909|ref|YP_565601.1| - 0.058 13.8 1.3 0.28 11.7 0.1 2.2 2 0 0 2 2 2 0 Protein CHLORORESPIRATORY REDUCTION 7 EF-hand_8 PF13833.6 gi|91772909|ref|YP_565601.1| - 0.12 12.2 0.3 0.34 10.8 0.0 1.9 2 0 0 2 2 2 0 EF-hand domain pair FumaraseC_C PF10415.9 gi|91772909|ref|YP_565601.1| - 0.23 11.9 2.6 0.25 11.8 0.2 2.2 2 1 0 2 2 2 0 Fumarase C C-terminus FANC_SAP PF18081.1 gi|91772909|ref|YP_565601.1| - 0.69 10.1 2.9 9.2 6.5 0.0 3.0 3 1 1 4 4 4 0 Fanconi anemia-associated nuclease SAP domain Ribosomal_L21e PF01157.18 gi|91772910|ref|YP_565602.1| - 6.9e-35 118.9 0.4 7.5e-35 118.8 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e THUMP PF02926.17 gi|91772911|ref|YP_565603.1| - 3.5e-12 46.6 0.4 2.5e-11 43.9 0.0 2.2 2 0 0 2 2 2 1 THUMP domain TruB_N PF01509.18 gi|91772911|ref|YP_565603.1| - 0.025 14.9 0.2 0.63 10.4 0.2 2.5 1 1 0 1 1 1 0 TruB family pseudouridylate synthase (N terminal domain) Methyltrn_RNA_2 PF04013.12 gi|91772912|ref|YP_565604.1| - 8.9e-65 218.1 0.0 1.1e-64 217.8 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase Methyltrans_RNA PF04452.14 gi|91772912|ref|YP_565604.1| - 0.01 15.2 0.0 0.014 14.7 0.0 1.1 1 0 0 1 1 1 1 RNA methyltransferase MurB_C PF02873.16 gi|91772912|ref|YP_565604.1| - 0.12 12.5 0.0 0.36 10.9 0.0 1.8 1 1 0 1 1 1 0 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain dUTPase PF00692.19 gi|91772913|ref|YP_565605.1| - 5.5e-11 42.2 0.0 7.7e-11 41.8 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|91772913|ref|YP_565605.1| - 0.13 11.0 0.0 0.2 10.4 0.0 1.4 1 1 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) FIST PF08495.10 gi|91772914|ref|YP_565606.1| - 9.3e-29 100.6 0.1 2.5e-28 99.3 0.1 1.7 2 0 0 2 2 2 1 FIST N domain FIST_C PF10442.9 gi|91772914|ref|YP_565606.1| - 1.4e-15 57.4 0.1 5.3e-14 52.3 0.0 2.7 3 0 0 3 3 3 1 FIST C domain DUF772 PF05598.11 gi|91772915|ref|YP_565607.1| - 9.1e-22 76.9 0.0 1.8e-21 75.9 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91772915|ref|YP_565607.1| - 1.8e-16 60.4 2.1 5.5e-16 58.9 2.1 1.8 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91772915|ref|YP_565607.1| - 0.0038 17.4 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91772915|ref|YP_565607.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91772915|ref|YP_565607.1| - 0.037 13.7 0.0 0.067 12.9 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease HisKA_2 PF07568.12 gi|91772916|ref|YP_565608.1| - 4.6e-31 106.7 6.4 1e-30 105.6 3.2 3.1 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.7 gi|91772916|ref|YP_565608.1| - 7.2e-17 61.5 4.1 2.6e-07 30.8 0.0 4.1 5 0 0 5 5 4 2 PAS domain PAS PF00989.25 gi|91772916|ref|YP_565608.1| - 1.1e-16 60.8 0.8 2.2e-10 40.5 0.0 3.1 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.7 gi|91772916|ref|YP_565608.1| - 1.9e-14 53.3 0.0 9.6e-07 28.7 0.0 3.2 3 0 0 3 3 3 2 PAS domain PAS_4 PF08448.10 gi|91772916|ref|YP_565608.1| - 1.2e-11 44.8 0.0 1.5e-06 28.4 0.0 2.8 2 0 0 2 2 2 2 PAS fold HATPase_c PF02518.26 gi|91772916|ref|YP_565608.1| - 5.7e-10 39.7 0.5 1.6e-09 38.3 0.5 1.8 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF PF01590.26 gi|91772916|ref|YP_565608.1| - 6.8e-10 39.7 0.0 1.4e-05 25.8 0.0 3.5 3 0 0 3 3 3 1 GAF domain HWE_HK PF07536.14 gi|91772916|ref|YP_565608.1| - 5.4e-07 30.2 0.2 2.9e-06 27.9 0.2 2.3 1 0 0 1 1 1 1 HWE histidine kinase GAF_3 PF13492.6 gi|91772916|ref|YP_565608.1| - 8.7e-07 29.3 0.0 0.031 14.6 0.0 3.0 3 0 0 3 3 3 2 GAF domain HATPase_c_2 PF13581.6 gi|91772916|ref|YP_565608.1| - 1.4e-06 28.3 0.0 3.1e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_7 PF12860.7 gi|91772916|ref|YP_565608.1| - 0.0004 20.5 0.6 2.3 8.4 0.0 4.5 3 2 0 3 3 3 1 PAS fold Cache_3-Cache_2 PF17201.4 gi|91772916|ref|YP_565608.1| - 0.0058 15.9 2.1 0.08 12.2 0.0 2.9 3 0 0 3 3 3 1 Cache 3/Cache 2 fusion domain HATPase_c_5 PF14501.6 gi|91772916|ref|YP_565608.1| - 0.0068 16.3 0.7 0.025 14.5 0.7 2.0 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.6 gi|91772916|ref|YP_565608.1| - 0.086 12.7 0.0 0.24 11.2 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Spa1_C PF18218.1 gi|91772916|ref|YP_565608.1| - 0.087 13.2 0.6 0.48 10.9 0.1 2.5 2 0 0 2 2 2 0 Lantibiotic immunity protein Spa1 C-terminal domain SPOB_a PF14689.6 gi|91772916|ref|YP_565608.1| - 0.22 11.3 2.2 2.3 8.0 1.6 2.8 1 1 1 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain DDE_Tnp_IS66 PF03050.14 gi|91772917|ref|YP_565609.1| - 1.9e-67 227.7 0.4 6.3e-67 226.0 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91772917|ref|YP_565609.1| - 9e-11 42.0 3.8 2.7e-10 40.5 3.8 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 SlyX PF04102.12 gi|91772917|ref|YP_565609.1| - 5.2e-05 23.8 0.7 0.00014 22.4 0.7 1.7 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91772917|ref|YP_565609.1| - 0.00011 22.5 0.3 0.17 12.1 0.2 2.8 3 0 0 3 3 3 2 DDE domain BST2 PF16716.5 gi|91772917|ref|YP_565609.1| - 0.067 13.8 1.4 0.3 11.7 1.4 2.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Zn_Tnp_IS1595 PF12760.7 gi|91772917|ref|YP_565609.1| - 0.14 12.2 2.7 0.83 9.7 0.8 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF16 PF01519.16 gi|91772917|ref|YP_565609.1| - 0.14 12.7 2.6 0.55 10.7 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF16 Lar_restr_allev PF14354.6 gi|91772917|ref|YP_565609.1| - 0.36 11.2 6.9 0.52 10.7 4.5 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91772917|ref|YP_565609.1| - 1 10.1 8.9 7.1 7.4 1.5 3.6 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PLATZ PF04640.14 gi|91772917|ref|YP_565609.1| - 2.1 9.0 6.0 0.65 10.7 1.1 2.7 2 1 0 2 2 2 0 PLATZ transcription factor DeoC PF01791.9 gi|91772918|ref|YP_565610.1| - 3.9e-60 203.4 0.1 4.4e-60 203.2 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase AP_endonuc_2 PF01261.24 gi|91772918|ref|YP_565610.1| - 0.11 11.9 0.0 0.64 9.4 0.0 1.9 1 1 1 2 2 2 0 Xylose isomerase-like TIM barrel DUF772 PF05598.11 gi|91772919|ref|YP_565611.1| - 9.1e-22 76.9 0.0 1.8e-21 75.9 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91772919|ref|YP_565611.1| - 1.8e-16 60.4 2.1 5.5e-16 58.9 2.1 1.8 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91772919|ref|YP_565611.1| - 0.0038 17.4 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91772919|ref|YP_565611.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91772919|ref|YP_565611.1| - 0.037 13.7 0.0 0.067 12.9 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease HGTP_anticodon PF03129.20 gi|91772920|ref|YP_565612.1| - 2.4e-21 75.7 0.1 2.4e-21 75.7 0.1 2.8 4 0 0 4 4 4 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|91772920|ref|YP_565612.1| - 7.5e-11 42.3 0.0 1.9e-10 41.0 0.0 1.6 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 gi|91772920|ref|YP_565612.1| - 0.11 11.6 0.8 3.1 6.8 0.2 2.4 2 0 0 2 2 2 0 tRNA synthetases class II (D, K and N) ERCC4 PF02732.15 gi|91772921|ref|YP_565613.1| - 1.8e-29 102.9 0.3 1.6e-28 99.8 0.0 2.6 2 0 0 2 2 2 1 ERCC4 domain Helicase_C PF00271.31 gi|91772921|ref|YP_565613.1| - 3.8e-25 88.4 0.6 2e-22 79.7 0.0 3.1 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|91772921|ref|YP_565613.1| - 6.6e-19 68.3 0.8 4.1e-18 65.7 0.0 2.5 3 0 0 3 3 3 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|91772921|ref|YP_565613.1| - 1.3e-13 51.3 2.2 2e-13 50.7 0.0 2.4 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit HHH_2 PF12826.7 gi|91772921|ref|YP_565613.1| - 4.6e-11 42.7 0.0 1.5e-10 41.0 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|91772921|ref|YP_565613.1| - 6.2e-11 42.7 0.0 2.5e-10 40.8 0.0 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain 5_3_exonuc PF01367.20 gi|91772921|ref|YP_565613.1| - 0.00074 20.1 1.5 0.028 15.0 0.1 3.5 2 1 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_8 PF14716.6 gi|91772921|ref|YP_565613.1| - 0.0016 18.8 0.6 0.02 15.2 0.0 3.1 2 1 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|91772921|ref|YP_565613.1| - 0.0046 16.8 0.2 0.018 14.9 0.1 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif LPD37 PF18853.1 gi|91772921|ref|YP_565613.1| - 0.046 13.3 0.7 9.9 5.6 0.0 2.6 2 0 0 2 2 2 0 Large polyvalent protein associated domain 37 TusA PF01206.17 gi|91772921|ref|YP_565613.1| - 0.058 13.2 0.1 1.7 8.5 0.0 3.1 3 0 0 3 3 3 0 Sulfurtransferase TusA RNA_pol_A_CTD PF03118.15 gi|91772921|ref|YP_565613.1| - 0.061 13.1 0.1 0.21 11.4 0.1 2.0 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain PhoH PF02562.16 gi|91772921|ref|YP_565613.1| - 0.074 12.5 0.2 0.7 9.3 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein HHH_3 PF12836.7 gi|91772921|ref|YP_565613.1| - 0.13 12.5 0.0 0.41 10.9 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF1151 PF06625.11 gi|91772921|ref|YP_565613.1| - 3.8 7.5 6.7 2 8.4 1.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1151) Auto_anti-p27 PF06677.12 gi|91772922|ref|YP_565614.1| - 5.5e-13 48.8 2.3 9.1e-13 48.1 2.3 1.4 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.7 gi|91772922|ref|YP_565614.1| - 0.012 15.6 1.7 0.021 14.9 1.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon RecR PF02132.15 gi|91772922|ref|YP_565614.1| - 0.098 12.2 1.9 0.3 10.7 1.9 1.8 1 1 0 1 1 1 0 RecR protein zf-NADH-PPase PF09297.11 gi|91772922|ref|YP_565614.1| - 0.17 11.6 4.9 0.5 10.1 4.9 1.8 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain UPF0147 PF03685.13 gi|91772923|ref|YP_565615.1| - 1.7e-35 120.9 1.5 1.9e-35 120.8 1.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.12 gi|91772923|ref|YP_565615.1| - 0.019 15.2 0.1 0.23 11.8 0.1 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) tRNA-synt_2d PF01409.20 gi|91772924|ref|YP_565616.1| - 6.2e-53 179.8 0.0 3.2e-48 164.4 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) SepRS_C PF18006.1 gi|91772924|ref|YP_565616.1| - 5.6e-13 48.7 0.0 1.4e-12 47.5 0.0 1.7 1 0 0 1 1 1 1 O-phosphoseryl-tRNA synthetase C-terminal domain tRNA_synthFbeta PF17759.1 gi|91772924|ref|YP_565616.1| - 1.2e-07 31.4 0.0 0.0001 21.8 0.0 2.2 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain Lambda_Bor PF06291.11 gi|91772924|ref|YP_565616.1| - 0.073 13.1 0.0 0.19 11.8 0.0 1.6 1 0 0 1 1 1 0 Bor protein DUF169 PF02596.15 gi|91772925|ref|YP_565617.1| - 3.3e-27 95.7 0.0 4e-27 95.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 DUF473 PF04322.12 gi|91772926|ref|YP_565618.1| - 2.2e-43 146.8 0.6 2.5e-43 146.7 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF473) PAC2 PF09754.9 gi|91772927|ref|YP_565619.1| - 4.5e-53 180.4 0.3 5.1e-53 180.2 0.3 1.0 1 0 0 1 1 1 1 PAC2 family Ribosomal_L9_C PF03948.14 gi|91772927|ref|YP_565619.1| - 0.062 13.8 2.4 4.6 7.8 0.2 2.9 3 0 0 3 3 3 0 Ribosomal protein L9, C-terminal domain PK_C PF02887.16 gi|91772928|ref|YP_565620.1| - 3.5e-15 56.3 0.5 4.6e-15 55.9 0.5 1.2 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Sigma_reg_N PF13800.6 gi|91772929|ref|YP_565621.1| - 0.027 14.7 0.6 0.038 14.3 0.6 1.1 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF4436 PF14494.6 gi|91772929|ref|YP_565621.1| - 0.053 12.8 0.1 0.066 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4436) MTD PF01993.18 gi|91772930|ref|YP_565622.1| - 8.7e-129 428.7 3.2 9.8e-129 428.5 3.2 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase Ammonium_transp PF00909.21 gi|91772933|ref|YP_565625.1| - 5.6e-67 226.2 26.7 6.3e-67 226.0 26.7 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.22 gi|91772934|ref|YP_565626.1| - 3.8e-31 107.7 3.7 4.2e-31 107.6 3.7 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Hydrolase PF00702.26 gi|91772935|ref|YP_565627.1| - 2.3e-20 73.8 0.1 3.2e-20 73.3 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|91772935|ref|YP_565627.1| - 3.3e-20 73.3 0.0 4.3e-20 72.9 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|91772935|ref|YP_565627.1| - 3.6e-13 49.5 0.4 1.7e-11 44.0 0.4 2.0 1 1 0 1 1 1 1 Putative Phosphatase Hydrolase_3 PF08282.12 gi|91772935|ref|YP_565627.1| - 2.4e-11 43.9 0.0 1.8e-09 37.8 0.0 2.5 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|91772935|ref|YP_565627.1| - 1e-09 38.7 0.5 3.3e-08 33.8 0.5 2.8 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|91772935|ref|YP_565627.1| - 0.0017 17.9 0.0 0.24 10.9 0.0 2.2 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase_like PF13242.6 gi|91772935|ref|YP_565627.1| - 0.012 15.6 0.0 0.061 13.4 0.0 2.1 2 0 0 2 2 2 0 HAD-hyrolase-like Acid_PPase PF12689.7 gi|91772935|ref|YP_565627.1| - 0.052 13.4 0.0 0.43 10.4 0.0 2.2 1 1 0 1 1 1 0 Acid Phosphatase PNK3P PF08645.11 gi|91772935|ref|YP_565627.1| - 0.055 13.2 0.0 0.63 9.7 0.0 2.1 2 0 0 2 2 2 0 Polynucleotide kinase 3 phosphatase DUF705 PF05152.12 gi|91772935|ref|YP_565627.1| - 0.096 12.1 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF705) YkyA PF10368.9 gi|91772936|ref|YP_565628.1| - 0.0075 16.0 17.0 0.0075 16.0 17.0 3.2 1 1 2 3 3 3 1 Putative cell-wall binding lipoprotein Syntaxin_2 PF14523.6 gi|91772936|ref|YP_565628.1| - 0.014 15.7 8.8 0.014 15.7 8.8 3.7 2 2 0 3 3 3 0 Syntaxin-like protein DUF5600 PF18150.1 gi|91772936|ref|YP_565628.1| - 0.015 15.8 2.7 0.015 15.8 2.7 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF5600) Golgin_A5 PF09787.9 gi|91772936|ref|YP_565628.1| - 0.3 10.5 39.5 1.1 8.7 21.0 2.4 1 1 0 2 2 2 0 Golgin subfamily A member 5 Laminin_II PF06009.12 gi|91772936|ref|YP_565628.1| - 0.51 10.3 29.9 0.7 9.9 1.0 4.8 1 1 4 5 5 5 0 Laminin Domain II mCpol PF18182.1 gi|91772936|ref|YP_565628.1| - 1.6 9.1 6.9 0.28 11.5 1.5 2.4 2 1 0 2 2 2 0 minimal CRISPR polymerase domain Taxilin PF09728.9 gi|91772936|ref|YP_565628.1| - 1.9 7.6 50.0 9.2 5.3 50.0 2.0 1 1 0 1 1 1 0 Myosin-like coiled-coil protein TarH PF02203.15 gi|91772936|ref|YP_565628.1| - 5.7 6.8 21.3 0.64 9.9 5.9 2.9 2 1 1 3 3 3 0 Tar ligand binding domain homologue Seryl_tRNA_N PF02403.22 gi|91772936|ref|YP_565628.1| - 6.5 7.0 46.2 1.3 9.3 17.2 4.3 1 1 2 3 3 2 0 Seryl-tRNA synthetase N-terminal domain JIP_LZII PF16471.5 gi|91772936|ref|YP_565628.1| - 6.8 6.9 25.1 0.83 9.9 3.7 4.6 1 1 3 4 4 4 0 JNK-interacting protein leucine zipper II AAA_13 PF13166.6 gi|91772936|ref|YP_565628.1| - 6.9 5.2 38.6 3.7 6.1 10.4 2.0 1 1 1 2 2 2 0 AAA domain Fez1 PF06818.15 gi|91772936|ref|YP_565628.1| - 7.9 6.9 38.5 2.5 8.5 17.5 2.1 1 1 1 2 2 2 0 Fez1 DUF2935 PF11155.8 gi|91772936|ref|YP_565628.1| - 8.8 6.7 21.7 8.2 6.8 5.0 3.7 2 2 1 3 3 3 0 Domain of unknown function (DUF2935) Peptidase_S8 PF00082.22 gi|91772937|ref|YP_565629.1| - 1.7e-47 162.1 8.1 1.7e-47 162.1 8.1 2.5 2 0 0 2 2 2 1 Subtilase family DUF4959 PF16323.5 gi|91772937|ref|YP_565629.1| - 6e-09 36.2 3.8 0.17 12.2 0.0 5.5 3 1 2 5 5 5 2 Domain of unknown function (DUF4959) DUF2846 PF11008.8 gi|91772937|ref|YP_565629.1| - 8.4e-08 32.1 3.1 0.16 12.0 0.1 4.6 3 1 0 4 4 4 3 Protein of unknown function (DUF2846) DUF2369 PF10179.9 gi|91772937|ref|YP_565629.1| - 4.1e-05 23.9 8.6 0.066 13.6 0.0 4.0 4 0 0 4 4 4 2 Uncharacterised conserved protein (DUF2369) fn3 PF00041.21 gi|91772937|ref|YP_565629.1| - 0.036 14.4 31.6 0.05 13.9 0.5 7.5 5 5 0 5 5 5 0 Fibronectin type III domain Radical_SAM PF04055.21 gi|91772938|ref|YP_565630.1| - 8.2e-19 68.6 0.0 1.1e-18 68.1 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|91772938|ref|YP_565630.1| - 2.5e-07 31.1 0.1 5.3e-07 30.1 0.1 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.6 gi|91772938|ref|YP_565630.1| - 7.8e-05 22.8 0.0 0.00014 22.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|91772938|ref|YP_565630.1| - 0.00019 21.7 0.0 0.00031 21.0 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Pyr_redox_2 PF07992.14 gi|91772939|ref|YP_565631.1| - 2.8e-11 43.2 0.2 9.4e-06 25.1 0.1 2.4 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|91772939|ref|YP_565631.1| - 4.8e-11 42.0 0.4 8.7e-08 31.3 0.1 2.2 2 0 0 2 2 2 2 HI0933-like protein Lycopene_cycl PF05834.12 gi|91772939|ref|YP_565631.1| - 6.9e-10 38.5 0.0 3.3e-09 36.3 0.0 1.8 1 1 0 1 1 1 1 Lycopene cyclase protein FAD_binding_3 PF01494.19 gi|91772939|ref|YP_565631.1| - 1.9e-09 37.3 0.1 4.6e-06 26.1 0.1 2.3 2 0 0 2 2 2 2 FAD binding domain Pyr_redox_3 PF13738.6 gi|91772939|ref|YP_565631.1| - 6.8e-08 32.1 0.0 2.5e-07 30.2 0.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|91772939|ref|YP_565631.1| - 2.8e-07 30.5 0.1 0.0016 18.1 0.0 2.5 2 1 1 3 3 3 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|91772939|ref|YP_565631.1| - 5.2e-07 29.4 0.0 8.4e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|91772939|ref|YP_565631.1| - 3.2e-05 23.2 0.0 6.9e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 gi|91772939|ref|YP_565631.1| - 3.7e-05 23.1 0.0 7.2e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.6 gi|91772939|ref|YP_565631.1| - 7.1e-05 23.0 0.0 0.00021 21.4 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|91772939|ref|YP_565631.1| - 0.0002 20.6 0.0 0.00033 19.8 0.0 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|91772939|ref|YP_565631.1| - 0.00079 18.4 0.2 0.25 10.2 0.0 2.1 1 1 1 2 2 2 2 Tryptophan halogenase AlaDh_PNT_C PF01262.21 gi|91772939|ref|YP_565631.1| - 0.0097 15.2 0.2 0.02 14.2 0.2 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|91772939|ref|YP_565631.1| - 0.011 16.3 0.0 0.56 10.8 0.0 2.8 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase UbiA PF01040.18 gi|91772940|ref|YP_565632.1| - 6.8e-41 140.2 17.9 8.2e-41 140.0 17.9 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family TGT PF01702.18 gi|91772941|ref|YP_565633.1| - 2.8e-85 286.6 0.0 3.8e-85 286.1 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase DGC PF08859.11 gi|91772942|ref|YP_565634.1| - 1.3e-32 112.0 0.8 1.8e-32 111.6 0.8 1.2 1 0 0 1 1 1 1 DGC domain PDH PF02153.17 gi|91772942|ref|YP_565634.1| - 0.043 12.8 0.1 0.053 12.5 0.1 1.0 1 0 0 1 1 1 0 Prephenate dehydrogenase Thioredoxin_3 PF13192.6 gi|91772943|ref|YP_565635.1| - 1.7e-28 98.4 1.1 1.9e-28 98.3 1.1 1.0 1 0 0 1 1 1 1 Thioredoxin domain ArsD PF06953.11 gi|91772943|ref|YP_565635.1| - 0.021 15.2 0.0 0.023 15.1 0.0 1.2 1 0 0 1 1 1 0 Arsenical resistance operon trans-acting repressor ArsD Glutaredoxin PF00462.24 gi|91772943|ref|YP_565635.1| - 0.11 12.8 0.2 0.23 11.7 0.2 1.7 1 1 0 1 1 1 0 Glutaredoxin Thioredoxin_4 PF13462.6 gi|91772943|ref|YP_565635.1| - 0.11 12.6 0.3 0.25 11.5 0.3 1.6 1 1 0 1 1 1 0 Thioredoxin ArsP_1 PF03773.13 gi|91772944|ref|YP_565636.1| - 7e-85 284.7 25.6 8.8e-85 284.4 25.6 1.0 1 0 0 1 1 1 1 Predicted permease DUF772 PF05598.11 gi|91772945|ref|YP_565637.1| - 0.01 15.8 0.0 0.035 14.1 0.0 1.9 1 1 0 1 1 1 0 Transposase domain (DUF772) DUF4283 PF14111.6 gi|91772945|ref|YP_565637.1| - 0.074 12.6 0.1 0.14 11.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) HTH_20 PF12840.7 gi|91772946|ref|YP_565638.1| - 1.1e-11 44.6 0.1 1.9e-11 43.8 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|91772946|ref|YP_565638.1| - 6.2e-10 38.8 0.3 9.9e-10 38.1 0.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|91772946|ref|YP_565638.1| - 1.7e-06 27.5 0.2 3e-06 26.7 0.2 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|91772946|ref|YP_565638.1| - 4.5e-05 23.3 0.1 7.7e-05 22.5 0.1 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|91772946|ref|YP_565638.1| - 0.00028 20.7 0.1 0.00041 20.2 0.1 1.2 1 0 0 1 1 1 1 MarR family DUF4430 PF14478.6 gi|91772946|ref|YP_565638.1| - 0.00054 20.5 0.2 0.0023 18.5 0.2 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4430) HTH_28 PF13518.6 gi|91772946|ref|YP_565638.1| - 0.0024 18.0 0.0 0.0049 17.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4423 PF14394.6 gi|91772946|ref|YP_565638.1| - 0.0043 16.8 0.0 0.0063 16.2 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_29 PF13551.6 gi|91772946|ref|YP_565638.1| - 0.02 14.9 0.0 0.039 14.0 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix HTH_11 PF08279.12 gi|91772946|ref|YP_565638.1| - 0.049 13.6 0.2 0.084 12.8 0.2 1.4 1 0 0 1 1 1 0 HTH domain HTH_IclR PF09339.10 gi|91772946|ref|YP_565638.1| - 0.1 12.4 0.1 0.69 9.8 0.1 2.0 2 0 0 2 2 2 0 IclR helix-turn-helix domain GATase_7 PF13537.6 gi|91772946|ref|YP_565638.1| - 0.15 12.0 0.0 0.5 10.3 0.0 1.7 2 0 0 2 2 2 0 Glutamine amidotransferase domain RIO1 PF01163.22 gi|91772947|ref|YP_565639.1| - 3.3e-59 199.7 0.1 4.7e-59 199.2 0.1 1.1 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|91772947|ref|YP_565639.1| - 8e-05 22.1 0.3 0.00011 21.7 0.3 1.3 1 1 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 gi|91772947|ref|YP_565639.1| - 0.00066 19.1 0.2 0.076 12.4 0.1 2.1 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 gi|91772947|ref|YP_565639.1| - 0.00088 18.2 0.4 0.0014 17.4 0.4 1.4 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 gi|91772947|ref|YP_565639.1| - 0.016 15.1 0.0 0.038 13.9 0.0 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 gi|91772947|ref|YP_565639.1| - 0.071 12.4 0.0 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 Protein tyrosine kinase KH_1 PF00013.29 gi|91772948|ref|YP_565640.1| - 1.2e-11 44.3 5.9 1.5e-07 31.1 0.6 2.2 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 gi|91772948|ref|YP_565640.1| - 0.00085 19.1 5.0 0.12 12.2 1.0 2.5 2 0 0 2 2 2 2 KH domain KH_5 PF13184.6 gi|91772948|ref|YP_565640.1| - 2 8.6 4.4 10 6.3 0.5 2.7 2 1 1 3 3 3 0 NusA-like KH domain KH_4 PF13083.6 gi|91772948|ref|YP_565640.1| - 2.6 8.0 8.4 8.8 6.3 2.3 3.0 2 2 1 3 3 3 0 KH domain Fasciclin PF02469.22 gi|91772949|ref|YP_565641.1| - 2.1e-27 95.9 0.0 2.4e-27 95.7 0.0 1.0 1 0 0 1 1 1 1 Fasciclin domain HATPase_c PF02518.26 gi|91772950|ref|YP_565642.1| - 1.5e-25 89.9 0.4 2.7e-25 89.1 0.1 1.6 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91772950|ref|YP_565642.1| - 5.2e-20 71.2 0.0 9.9e-20 70.4 0.0 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 gi|91772950|ref|YP_565642.1| - 1.9e-15 57.0 0.0 4.8e-15 55.7 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 gi|91772950|ref|YP_565642.1| - 2.4e-12 46.8 0.0 5.2e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.12 gi|91772950|ref|YP_565642.1| - 4.2e-07 30.2 0.0 8.4e-07 29.2 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|91772950|ref|YP_565642.1| - 1e-06 29.0 0.0 1.6e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|91772950|ref|YP_565642.1| - 0.00014 21.8 0.0 0.0003 20.7 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_11 PF14598.6 gi|91772950|ref|YP_565642.1| - 0.00069 19.7 0.0 0.0015 18.6 0.0 1.5 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 gi|91772950|ref|YP_565642.1| - 0.0081 16.0 0.0 0.016 15.0 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.7 gi|91772950|ref|YP_565642.1| - 0.045 13.9 0.1 0.14 12.3 0.0 1.8 2 0 0 2 2 2 0 PAS fold sCache_like PF16736.5 gi|91772950|ref|YP_565642.1| - 0.079 13.1 0.0 0.23 11.6 0.0 1.7 1 0 0 1 1 1 0 Single Cache-like PAS_4 PF08448.10 gi|91772951|ref|YP_565643.1| - 0.00013 22.2 0.0 0.00023 21.4 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|91772951|ref|YP_565643.1| - 0.00083 19.6 0.1 0.0048 17.1 0.0 2.2 3 0 0 3 3 3 1 PAS domain PAS PF00989.25 gi|91772951|ref|YP_565643.1| - 0.0034 17.4 0.0 0.0082 16.1 0.0 1.6 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|91772951|ref|YP_565643.1| - 0.0051 16.8 0.0 0.015 15.4 0.0 1.8 1 0 0 1 1 1 1 PAS domain DUF4801 PF16059.5 gi|91772951|ref|YP_565643.1| - 0.038 13.9 2.6 0.094 12.7 2.6 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) CCG PF02754.16 gi|91772952|ref|YP_565644.1| - 8e-30 102.9 5.8 4.1e-16 59.0 0.0 2.7 3 0 0 3 3 3 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|91772952|ref|YP_565644.1| - 1.1e-09 38.5 7.3 1.1e-09 38.5 7.3 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91772952|ref|YP_565644.1| - 2.8e-09 37.4 7.7 2.8e-09 37.4 7.7 2.6 4 0 0 4 4 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91772952|ref|YP_565644.1| - 3.8e-06 26.9 20.3 1.4e-05 25.1 10.7 3.0 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91772952|ref|YP_565644.1| - 1.3e-05 25.7 9.4 1.3e-05 25.7 9.4 2.5 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91772952|ref|YP_565644.1| - 0.0015 18.7 6.7 0.15 12.3 0.4 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Thiolase_N PF00108.23 gi|91772952|ref|YP_565644.1| - 0.0033 16.8 0.0 0.0052 16.2 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Fer4_21 PF14697.6 gi|91772952|ref|YP_565644.1| - 0.006 16.7 10.4 0.1 12.8 0.4 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91772952|ref|YP_565644.1| - 0.0062 17.0 0.5 0.0062 17.0 0.5 3.8 4 0 0 4 4 3 1 4Fe-4S binding domain Fer4 PF00037.27 gi|91772952|ref|YP_565644.1| - 0.02 14.7 11.9 0.026 14.3 3.6 3.0 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91772952|ref|YP_565644.1| - 0.022 14.9 14.9 0.022 14.9 14.9 3.2 3 1 1 4 4 4 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91772952|ref|YP_565644.1| - 0.051 13.7 1.5 0.051 13.7 1.5 3.4 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|91772952|ref|YP_565644.1| - 0.28 11.0 7.4 0.32 10.8 0.6 2.7 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_22 PF17179.4 gi|91772952|ref|YP_565644.1| - 0.45 11.4 8.1 8.4 7.3 0.2 3.4 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91772952|ref|YP_565644.1| - 0.46 11.5 18.4 0.24 12.4 14.1 2.7 2 1 1 3 3 2 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|91772952|ref|YP_565644.1| - 1.3 10.2 15.0 12 7.1 3.7 3.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|91772952|ref|YP_565644.1| - 8.4 7.0 10.7 8.7 7.0 1.3 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_6 PF12837.7 gi|91772952|ref|YP_565644.1| - 9.1 6.5 19.5 0.16 12.1 3.0 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain FAD-oxidase_C PF02913.19 gi|91772953|ref|YP_565645.1| - 1.7e-58 198.2 0.0 2.4e-58 197.7 0.0 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|91772953|ref|YP_565645.1| - 3.1e-38 130.7 0.3 4.9e-38 130.0 0.3 1.3 1 0 0 1 1 1 1 FAD binding domain DUF4920 PF16267.5 gi|91772953|ref|YP_565645.1| - 0.053 13.5 0.1 0.3 11.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4920) Lar_N PF09861.9 gi|91772954|ref|YP_565646.1| - 4.1e-62 209.0 0.0 9.1e-62 207.9 0.0 1.6 2 0 0 2 2 2 1 Lactate racemase N-terminal domain Mur_ligase_C PF02875.21 gi|91772954|ref|YP_565646.1| - 0.00089 19.5 0.1 0.0023 18.1 0.1 1.7 1 0 0 1 1 1 1 Mur ligase family, glutamate ligase domain PAS_9 PF13426.7 gi|91772955|ref|YP_565647.1| - 1.3e-36 125.0 9.1 2.9e-14 53.2 0.0 4.7 4 0 0 4 4 4 3 PAS domain PAS PF00989.25 gi|91772955|ref|YP_565647.1| - 1.3e-30 105.7 2.7 2.4e-10 40.4 0.0 4.3 4 0 0 4 4 4 4 PAS fold HATPase_c PF02518.26 gi|91772955|ref|YP_565647.1| - 2.4e-30 105.3 0.1 1e-29 103.3 0.1 2.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_3 PF08447.12 gi|91772955|ref|YP_565647.1| - 1.2e-19 70.4 0.7 1.8e-05 24.9 0.1 3.7 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.10 gi|91772955|ref|YP_565647.1| - 4.5e-18 65.5 0.0 6.3e-07 29.6 0.0 5.2 4 1 0 4 4 4 4 PAS fold HisKA PF00512.25 gi|91772955|ref|YP_565647.1| - 6.3e-14 51.8 0.0 1.9e-13 50.2 0.0 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 gi|91772955|ref|YP_565647.1| - 1.1e-13 50.8 0.1 2e-05 24.5 0.0 3.8 4 0 0 4 4 3 3 PAS domain PAS_11 PF14598.6 gi|91772955|ref|YP_565647.1| - 2.4e-05 24.4 0.1 0.024 14.8 0.0 2.8 2 0 0 2 2 2 2 PAS domain HATPase_c_5 PF14501.6 gi|91772955|ref|YP_565647.1| - 0.012 15.5 0.0 0.056 13.4 0.0 2.2 1 0 0 1 1 1 0 GHKL domain HATPase_c_3 PF13589.6 gi|91772955|ref|YP_565647.1| - 0.08 12.8 0.0 0.21 11.4 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|91772955|ref|YP_565647.1| - 0.11 12.5 0.0 0.27 11.2 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain B12-binding PF02310.19 gi|91772956|ref|YP_565648.1| - 6.6e-08 32.6 0.0 1.3e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|91772956|ref|YP_565648.1| - 7.7e-08 32.7 0.0 1.6e-07 31.7 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain DUF4304 PF14137.6 gi|91772956|ref|YP_565648.1| - 0.052 13.7 0.2 0.11 12.6 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4304) URO-D PF01208.17 gi|91772957|ref|YP_565649.1| - 1.3e-67 228.4 0.0 1.4e-67 228.3 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF4817 PF16087.5 gi|91772957|ref|YP_565649.1| - 0.088 12.6 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) HATPase_c PF02518.26 gi|91772958|ref|YP_565650.1| - 1.3e-17 64.3 0.2 2.9e-17 63.2 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|91772958|ref|YP_565650.1| - 0.0036 17.1 0.4 0.01 15.7 0.4 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|91772958|ref|YP_565650.1| - 0.0069 16.3 0.8 0.029 14.3 0.8 2.1 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 gi|91772958|ref|YP_565650.1| - 0.0081 16.1 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain AhpC-TSA PF00578.21 gi|91772959|ref|YP_565651.1| - 7.5e-31 106.6 0.0 9.7e-31 106.3 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.9 gi|91772959|ref|YP_565651.1| - 1.3e-14 53.7 0.3 2e-13 49.9 0.3 2.3 2 0 0 2 2 2 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.10 gi|91772959|ref|YP_565651.1| - 4.7e-12 45.8 0.0 6.5e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 Redoxin P_C10 PF14974.6 gi|91772959|ref|YP_565651.1| - 0.0038 17.3 0.1 0.0079 16.3 0.1 1.6 1 0 0 1 1 1 1 Protein C10 Met_10 PF02475.16 gi|91772960|ref|YP_565652.1| - 1.9e-61 207.3 0.6 2.8e-61 206.7 0.6 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|91772960|ref|YP_565652.1| - 4.2e-13 48.9 0.6 4.2e-13 48.9 0.6 1.8 2 0 0 2 2 1 1 tRNA methyltransferase 5 N-terminal domain TRM PF02005.16 gi|91772960|ref|YP_565652.1| - 5.2e-07 29.2 0.1 7.9e-07 28.6 0.1 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.10 gi|91772960|ref|YP_565652.1| - 1.5e-06 27.8 0.1 2.5e-06 27.2 0.1 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.14 gi|91772960|ref|YP_565652.1| - 1.9e-06 27.5 0.1 3.4e-06 26.7 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|91772960|ref|YP_565652.1| - 2.4e-05 24.9 0.0 6.3e-05 23.6 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|91772960|ref|YP_565652.1| - 6.8e-05 22.0 0.0 0.00011 21.4 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Cons_hypoth95 PF03602.15 gi|91772960|ref|YP_565652.1| - 0.0006 19.5 0.0 0.001 18.7 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 gi|91772960|ref|YP_565652.1| - 0.00091 19.0 0.1 0.0014 18.5 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|91772960|ref|YP_565652.1| - 0.001 18.2 0.0 0.0017 17.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.13 gi|91772960|ref|YP_565652.1| - 0.0052 16.2 0.3 0.0095 15.4 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) ADH_zinc_N PF00107.26 gi|91772960|ref|YP_565652.1| - 0.0057 16.6 0.0 0.011 15.8 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltr_RsmB-F PF01189.17 gi|91772960|ref|YP_565652.1| - 0.0086 15.7 0.0 0.015 14.9 0.0 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F DUF3867 PF12983.7 gi|91772960|ref|YP_565652.1| - 0.036 14.1 0.4 0.062 13.3 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3867) Methyltransf_18 PF12847.7 gi|91772960|ref|YP_565652.1| - 0.044 13.7 0.1 0.12 12.3 0.1 1.7 1 0 0 1 1 1 0 Methyltransferase domain MethyltransfD12 PF02086.15 gi|91772960|ref|YP_565652.1| - 0.057 13.1 0.1 0.097 12.3 0.1 1.3 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase PTP_N PF12453.8 gi|91772960|ref|YP_565652.1| - 0.11 12.3 2.3 0.2 11.4 2.3 1.4 1 0 0 1 1 1 0 Protein tyrosine phosphatase N terminal TehB PF03848.14 gi|91772960|ref|YP_565652.1| - 0.11 11.9 0.0 0.17 11.3 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB GidB PF02527.15 gi|91772960|ref|YP_565652.1| - 0.16 11.3 0.0 0.25 10.6 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G LysE PF01810.18 gi|91772961|ref|YP_565653.1| - 2.1e-31 108.9 15.5 2.4e-31 108.7 15.5 1.0 1 0 0 1 1 1 1 LysE type translocator Phage_holin_2_1 PF04971.12 gi|91772961|ref|YP_565653.1| - 2.9 8.0 8.7 14 5.7 0.0 3.4 4 0 0 4 4 4 0 Bacteriophage P21 holin S TFIIB PF00382.19 gi|91772962|ref|YP_565654.1| - 7.7e-45 150.8 1.1 2.2e-21 75.7 0.3 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|91772962|ref|YP_565654.1| - 7.1e-17 60.6 1.8 7.1e-17 60.6 1.8 1.7 2 0 0 2 2 2 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|91772962|ref|YP_565654.1| - 3.6e-05 23.2 0.5 0.019 14.4 0.1 3.2 2 0 0 2 2 2 1 Sigma-70, region 4 OrfB_Zn_ribbon PF07282.11 gi|91772962|ref|YP_565654.1| - 0.0005 19.9 0.4 0.0015 18.4 0.4 1.8 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Lar_restr_allev PF14354.6 gi|91772962|ref|YP_565654.1| - 0.01 16.2 1.4 0.085 13.2 0.4 2.7 3 0 0 3 3 3 0 Restriction alleviation protein Lar HTH_AsnC-type PF13404.6 gi|91772962|ref|YP_565654.1| - 0.016 15.0 0.9 0.057 13.3 0.2 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain RPA_interact_C PF14768.6 gi|91772962|ref|YP_565654.1| - 0.024 15.2 0.1 1.8 9.2 0.0 2.4 2 0 0 2 2 2 0 Replication protein A interacting C-terminal Cyclin_C PF02984.19 gi|91772962|ref|YP_565654.1| - 0.049 13.7 0.0 8.4 6.5 0.0 2.4 2 0 0 2 2 2 0 Cyclin, C-terminal domain HypA PF01155.19 gi|91772962|ref|YP_565654.1| - 0.071 13.1 1.0 0.77 9.8 0.7 2.5 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|91772962|ref|YP_565654.1| - 0.077 13.0 1.0 0.41 10.7 0.3 2.2 2 0 0 2 2 2 0 Double zinc ribbon Elf1 PF05129.13 gi|91772962|ref|YP_565654.1| - 0.078 13.0 0.6 0.078 13.0 0.6 1.9 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like zf-ribbon_3 PF13248.6 gi|91772962|ref|YP_565654.1| - 0.088 12.2 2.5 0.71 9.4 2.5 2.3 1 1 0 1 1 1 0 zinc-ribbon domain DUF3797 PF12677.7 gi|91772962|ref|YP_565654.1| - 0.16 11.9 0.1 3.2 7.7 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) HTH_31 PF13560.6 gi|91772962|ref|YP_565654.1| - 0.19 12.1 4.0 7.7 6.9 0.1 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain DNA_RNApol_7kD PF03604.13 gi|91772962|ref|YP_565654.1| - 0.22 11.2 4.5 0.3 10.8 0.1 2.9 3 0 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit Auto_anti-p27 PF06677.12 gi|91772962|ref|YP_565654.1| - 0.22 11.7 1.8 2.5 8.3 0.7 2.3 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Zn-ribbon_8 PF09723.10 gi|91772962|ref|YP_565654.1| - 0.74 10.0 6.1 0.99 9.6 0.5 3.1 2 1 1 3 3 3 0 Zinc ribbon domain zf-Mss51 PF13824.6 gi|91772962|ref|YP_565654.1| - 0.99 9.6 3.5 25 5.0 2.0 3.3 3 1 0 3 3 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Nudix_N_2 PF14803.6 gi|91772962|ref|YP_565654.1| - 1.2 9.1 5.6 0.53 10.2 1.2 2.7 2 0 0 2 2 2 0 Nudix N-terminal Methyltransf_13 PF08421.11 gi|91772962|ref|YP_565654.1| - 2.5 8.4 6.8 3.1 8.1 0.1 2.8 2 1 1 3 3 2 0 Putative zinc binding domain RNA_POL_M_15KD PF02150.16 gi|91772962|ref|YP_565654.1| - 4.5 7.2 5.2 19 5.2 0.2 3.0 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit Gar1 PF04410.14 gi|91772963|ref|YP_565655.1| - 1.9e-05 24.5 0.1 2.2e-05 24.3 0.1 1.1 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region Phage_int_SAM_3 PF14659.6 gi|91772963|ref|YP_565655.1| - 0.13 12.5 0.0 0.28 11.5 0.0 1.5 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain Transposase_mut PF00872.18 gi|91772964|ref|YP_565656.1| - 9.5e-113 376.9 3.9 1.2e-112 376.6 3.9 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|91772964|ref|YP_565656.1| - 3.1e-10 40.4 0.0 8.9e-10 38.9 0.0 1.8 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|91772964|ref|YP_565656.1| - 0.00019 21.0 0.7 0.00039 20.0 0.7 1.5 1 1 0 1 1 1 1 Transposase IS66 family DUF4423 PF14394.6 gi|91772964|ref|YP_565656.1| - 0.033 13.9 0.3 0.12 12.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) DDE_Tnp_IS240 PF13610.6 gi|91772964|ref|YP_565656.1| - 0.041 14.1 5.7 5.7 7.2 4.1 2.9 2 1 0 2 2 2 0 DDE domain PEP-utilizers_C PF02896.18 gi|91772965|ref|YP_565657.1| - 5.6e-94 314.6 0.0 9.5e-94 313.8 0.0 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 gi|91772965|ref|YP_565657.1| - 3.6e-63 213.8 0.1 1.4e-37 129.7 0.0 3.3 1 1 2 3 3 3 3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|91772965|ref|YP_565657.1| - 2e-29 101.1 1.2 6.9e-29 99.4 1.2 2.0 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain RNA_pol_Rpb1_4 PF05000.17 gi|91772965|ref|YP_565657.1| - 0.53 10.3 2.4 0.87 9.6 0.0 2.4 3 0 0 3 3 3 0 RNA polymerase Rpb1, domain 4 PfkB PF00294.24 gi|91772966|ref|YP_565658.1| - 4.8e-47 160.7 0.0 5.7e-47 160.5 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase DUF555 PF04475.12 gi|91772967|ref|YP_565659.1| - 2.3e-48 162.7 0.1 2.7e-48 162.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF555) DUF357 PF04010.13 gi|91772968|ref|YP_565660.1| - 3.4e-31 107.1 0.1 3.9e-31 106.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF357) DUF87 PF01935.17 gi|91772969|ref|YP_565661.1| - 1.8e-40 139.4 0.2 3.8e-40 138.4 0.0 1.6 2 0 0 2 2 2 1 Helicase HerA, central domain HAS-barrel PF09378.10 gi|91772969|ref|YP_565661.1| - 1.8e-09 37.6 0.0 5.4e-09 36.1 0.0 1.9 2 0 0 2 2 2 1 HAS barrel domain TrwB_AAD_bind PF10412.9 gi|91772969|ref|YP_565661.1| - 0.00073 18.6 0.0 0.03 13.2 0.0 2.2 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_10 PF12846.7 gi|91772969|ref|YP_565661.1| - 0.0014 17.6 0.0 0.011 14.7 0.0 2.2 2 1 0 2 2 2 1 AAA-like domain SBP_bac_8 PF13416.6 gi|91772969|ref|YP_565661.1| - 0.0015 18.4 0.0 0.0037 17.1 0.0 1.6 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF853 PF05872.12 gi|91772969|ref|YP_565661.1| - 0.0018 16.9 0.0 0.55 8.8 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_22 PF13401.6 gi|91772969|ref|YP_565661.1| - 0.0025 18.1 0.0 2.1 8.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain DEAD PF00270.29 gi|91772969|ref|YP_565661.1| - 0.0033 17.2 0.0 1.6 8.5 0.0 3.1 2 1 1 3 3 3 2 DEAD/DEAH box helicase ResIII PF04851.15 gi|91772969|ref|YP_565661.1| - 0.0078 16.2 0.0 0.022 14.8 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit TP_methylase PF00590.20 gi|91772970|ref|YP_565662.1| - 3.9e-16 59.6 0.0 5e-16 59.3 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Cpn60_TCP1 PF00118.24 gi|91772971|ref|YP_565663.1| - 1.7e-158 528.3 24.7 1.9e-158 528.1 24.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF2119 PF09892.9 gi|91772972|ref|YP_565664.1| - 4.6e-72 241.4 0.0 5.2e-72 241.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) MttA_Hcf106 PF02416.16 gi|91772973|ref|YP_565665.1| - 1.6e-14 53.0 0.4 1.9e-14 52.7 0.4 1.3 1 1 0 1 1 1 1 mttA/Hcf106 family DUF1804 PF08822.11 gi|91772973|ref|YP_565665.1| - 0.0015 18.5 0.0 0.66 9.9 0.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1804) DUF5053 PF16476.5 gi|91772976|ref|YP_565668.1| - 0.042 13.5 0.1 0.1 12.3 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5053) S4 PF01479.25 gi|91772977|ref|YP_565669.1| - 3e-13 49.3 0.1 5.7e-13 48.4 0.1 1.5 1 0 0 1 1 1 1 S4 domain FtsJ PF01728.19 gi|91772977|ref|YP_565669.1| - 2.3e-08 34.3 0.0 3.7e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase Fibrillarin PF01269.17 gi|91772977|ref|YP_565669.1| - 3.1e-07 29.8 0.0 4.5e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.6 gi|91772977|ref|YP_565669.1| - 8.9e-05 23.1 0.0 0.00013 22.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91772977|ref|YP_565669.1| - 0.00035 20.4 0.0 0.00047 20.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|91772977|ref|YP_565669.1| - 0.0087 16.7 0.0 0.015 15.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain S4_2 PF13275.6 gi|91772977|ref|YP_565669.1| - 0.031 14.1 0.1 0.071 12.9 0.1 1.6 1 0 0 1 1 1 0 S4 domain MetW PF07021.12 gi|91772977|ref|YP_565669.1| - 0.038 13.6 0.1 1.9 8.0 0.0 2.2 1 1 1 2 2 2 0 Methionine biosynthesis protein MetW Methyltransf_24 PF13578.6 gi|91772977|ref|YP_565669.1| - 0.15 13.1 0.0 0.25 12.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Oxidored_FMN PF00724.20 gi|91772978|ref|YP_565670.1| - 1.3e-70 238.4 0.0 1.6e-70 238.1 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family His_biosynth PF00977.21 gi|91772978|ref|YP_565670.1| - 0.00091 18.7 0.0 0.0028 17.1 0.0 1.8 2 0 0 2 2 2 1 Histidine biosynthesis protein Dus PF01207.17 gi|91772978|ref|YP_565670.1| - 0.0013 17.9 0.0 0.055 12.6 0.0 2.2 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) Cytochrom_C_asm PF01578.20 gi|91772979|ref|YP_565671.1| - 5.9e-26 91.6 15.0 5.9e-26 91.6 15.0 2.0 2 1 0 2 2 2 1 Cytochrome C assembly protein FixQ PF05545.11 gi|91772979|ref|YP_565671.1| - 6 6.9 0.0 6 6.9 0.0 4.2 5 0 0 5 5 5 0 Cbb3-type cytochrome oxidase component FixQ CcmB PF03379.13 gi|91772980|ref|YP_565672.1| - 1.2e-37 129.5 18.8 1.4e-37 129.3 18.8 1.0 1 0 0 1 1 1 1 CcmB protein ABC2_membrane PF01061.24 gi|91772980|ref|YP_565672.1| - 9.5e-16 57.8 17.0 9.5e-16 57.8 17.0 1.5 1 1 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|91772980|ref|YP_565672.1| - 3.3e-09 36.3 22.7 3.3e-09 36.3 22.7 2.0 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|91772980|ref|YP_565672.1| - 1.3e-05 24.6 22.8 3.4e-05 23.3 15.3 2.4 1 1 1 2 2 2 2 ABC-2 family transporter protein Deltameth_res PF16020.5 gi|91772980|ref|YP_565672.1| - 0.24 11.3 0.0 0.24 11.3 0.0 3.5 4 0 0 4 4 4 0 Deltamethrin resistance ABC_tran PF00005.27 gi|91772981|ref|YP_565673.1| - 1.3e-34 119.6 0.0 1.8e-34 119.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91772981|ref|YP_565673.1| - 2.2e-08 34.3 4.6 0.0015 18.4 0.4 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|91772981|ref|YP_565673.1| - 0.0004 20.2 0.2 0.0009 19.1 0.1 1.5 1 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|91772981|ref|YP_565673.1| - 0.00057 19.6 0.3 0.0015 18.2 0.1 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA PF00004.29 gi|91772981|ref|YP_565673.1| - 0.0017 18.8 0.0 0.007 16.8 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|91772981|ref|YP_565673.1| - 0.003 17.9 0.0 0.0047 17.3 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|91772981|ref|YP_565673.1| - 0.011 16.0 0.4 2.4 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|91772981|ref|YP_565673.1| - 0.013 16.0 0.1 0.026 15.0 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|91772981|ref|YP_565673.1| - 0.018 15.3 0.1 0.052 13.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 gi|91772981|ref|YP_565673.1| - 0.031 13.0 0.0 0.038 12.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|91772981|ref|YP_565673.1| - 0.036 14.1 0.0 0.084 12.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 gi|91772981|ref|YP_565673.1| - 0.044 13.4 0.2 0.12 11.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|91772981|ref|YP_565673.1| - 0.046 13.3 0.1 0.5 9.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 gi|91772981|ref|YP_565673.1| - 0.056 13.4 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 gi|91772981|ref|YP_565673.1| - 0.093 13.3 0.3 0.29 11.7 0.3 2.0 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|91772981|ref|YP_565673.1| - 0.097 12.1 0.2 0.9 8.9 0.0 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_14 PF13173.6 gi|91772981|ref|YP_565673.1| - 0.1 12.6 0.0 0.3 11.1 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|91772981|ref|YP_565673.1| - 0.13 12.6 0.8 9.1 6.6 0.1 2.1 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|91772981|ref|YP_565673.1| - 0.13 11.8 0.1 0.29 10.7 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NACHT PF05729.12 gi|91772981|ref|YP_565673.1| - 0.15 12.0 0.1 0.32 10.9 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_30 PF13604.6 gi|91772981|ref|YP_565673.1| - 0.15 11.8 0.2 0.61 9.8 0.1 1.8 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|91772981|ref|YP_565673.1| - 0.27 10.5 0.7 0.57 9.4 0.1 1.8 3 0 0 3 3 3 0 Zeta toxin CARDB PF07705.11 gi|91772982|ref|YP_565674.1| - 2.1e-09 37.5 0.1 0.0024 18.1 0.0 3.0 3 0 0 3 3 3 2 CARDB NPCBM_assoc PF10633.9 gi|91772982|ref|YP_565674.1| - 0.0037 17.5 0.0 13 6.2 0.0 3.7 4 0 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase Cupredoxin_1 PF13473.6 gi|91772982|ref|YP_565674.1| - 0.0038 17.3 0.3 0.089 12.9 0.0 2.8 3 1 0 3 3 3 1 Cupredoxin-like domain Filamin PF00630.19 gi|91772982|ref|YP_565674.1| - 0.055 14.3 0.0 0.2 12.5 0.0 2.1 1 1 0 1 1 1 0 Filamin/ABP280 repeat Arrestin_C PF02752.22 gi|91772982|ref|YP_565674.1| - 0.11 12.9 0.5 2.7 8.5 0.0 3.1 4 1 0 4 4 4 0 Arrestin (or S-antigen), C-terminal domain FtsX PF02687.21 gi|91772983|ref|YP_565675.1| - 1.1e-08 35.5 6.7 1.1e-08 35.5 6.7 3.1 3 0 0 3 3 3 1 FtsX-like permease family ABC_tran PF00005.27 gi|91772984|ref|YP_565676.1| - 1.7e-33 116.0 0.0 2.4e-33 115.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|91772984|ref|YP_565676.1| - 1.1e-08 34.8 0.1 2.2e-08 33.8 0.1 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|91772984|ref|YP_565676.1| - 3.7e-08 33.5 0.0 0.0012 18.7 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|91772984|ref|YP_565676.1| - 3.2e-05 23.8 0.0 0.16 11.6 0.0 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_28 PF13521.6 gi|91772984|ref|YP_565676.1| - 0.00027 21.2 0.0 0.00073 19.8 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|91772984|ref|YP_565676.1| - 0.00027 20.6 0.2 0.047 13.3 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|91772984|ref|YP_565676.1| - 0.00028 21.5 0.2 0.00058 20.4 0.2 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|91772984|ref|YP_565676.1| - 0.0003 20.5 0.1 0.00052 19.7 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|91772984|ref|YP_565676.1| - 0.0003 21.3 0.3 0.0042 17.6 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|91772984|ref|YP_565676.1| - 0.00038 20.7 0.1 0.0008 19.7 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|91772984|ref|YP_565676.1| - 0.002 18.5 0.1 0.0028 18.1 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.17 gi|91772984|ref|YP_565676.1| - 0.0024 17.6 0.0 0.057 13.2 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein RsgA_GTPase PF03193.16 gi|91772984|ref|YP_565676.1| - 0.0048 16.8 0.3 0.015 15.2 0.0 1.9 2 0 0 2 2 2 1 RsgA GTPase SbcCD_C PF13558.6 gi|91772984|ref|YP_565676.1| - 0.0091 16.2 0.1 0.24 11.7 0.1 2.5 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit FtsK_SpoIIIE PF01580.18 gi|91772984|ref|YP_565676.1| - 0.013 14.9 0.0 0.021 14.2 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_30 PF13604.6 gi|91772984|ref|YP_565676.1| - 0.017 14.8 0.0 0.036 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|91772984|ref|YP_565676.1| - 0.018 15.0 0.0 0.032 14.2 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|91772984|ref|YP_565676.1| - 0.029 14.6 0.1 0.082 13.1 0.1 1.8 1 1 0 1 1 1 0 AAA domain DUF3584 PF12128.8 gi|91772984|ref|YP_565676.1| - 0.05 11.1 0.1 0.071 10.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) G-alpha PF00503.20 gi|91772984|ref|YP_565676.1| - 0.057 12.6 0.0 0.076 12.2 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit MobB PF03205.14 gi|91772984|ref|YP_565676.1| - 0.062 13.2 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ATPase PF06745.13 gi|91772984|ref|YP_565676.1| - 0.08 12.3 0.3 0.22 10.8 0.2 1.7 1 1 0 2 2 2 0 KaiC NB-ARC PF00931.22 gi|91772984|ref|YP_565676.1| - 0.081 12.1 0.2 0.16 11.2 0.2 1.4 1 1 0 1 1 1 0 NB-ARC domain cobW PF02492.19 gi|91772984|ref|YP_565676.1| - 0.082 12.5 0.2 0.36 10.4 0.1 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_13 PF13166.6 gi|91772984|ref|YP_565676.1| - 0.084 11.5 0.1 2.4 6.7 0.0 2.1 1 1 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|91772984|ref|YP_565676.1| - 0.092 12.5 0.2 0.18 11.5 0.1 1.7 2 1 0 2 2 2 0 AAA domain DUF87 PF01935.17 gi|91772984|ref|YP_565676.1| - 0.15 12.1 0.9 1.3 9.1 0.2 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain DUF4352 PF11611.8 gi|91772986|ref|YP_565678.1| - 2e-05 24.9 0.2 0.0049 17.1 0.2 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4352) DUF5067 PF16729.5 gi|91772986|ref|YP_565678.1| - 0.0077 16.1 0.4 0.027 14.4 0.2 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF5067) UDG PF03167.19 gi|91772987|ref|YP_565679.1| - 2.3e-07 30.9 0.0 3.1e-07 30.5 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily HD PF01966.22 gi|91772988|ref|YP_565680.1| - 1e-10 41.9 1.2 1.8e-10 41.1 1.2 1.4 1 0 0 1 1 1 1 HD domain DUF4894 PF16235.5 gi|91772988|ref|YP_565680.1| - 0.051 13.9 1.4 0.35 11.2 0.0 2.7 2 2 1 3 3 3 0 Domain of unknown function (DUF4894) ATP_bind_3 PF01171.20 gi|91772989|ref|YP_565681.1| - 2.4e-15 56.8 0.0 3.5e-15 56.2 0.0 1.3 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.16 gi|91772989|ref|YP_565681.1| - 1.9e-07 30.2 0.0 3e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase PAPS_reduct PF01507.19 gi|91772989|ref|YP_565681.1| - 4.8e-05 23.5 0.0 8.6e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.17 gi|91772989|ref|YP_565681.1| - 7.3e-05 22.0 0.1 0.0001 21.5 0.1 1.1 1 0 0 1 1 1 1 NAD synthase ThiI PF02568.14 gi|91772989|ref|YP_565681.1| - 0.00094 18.8 0.0 0.0016 18.1 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|91772989|ref|YP_565681.1| - 0.0038 16.7 0.1 0.044 13.3 0.0 2.5 3 0 0 3 3 3 1 Queuosine biosynthesis protein QueC zn-ribbon_14 PF16503.5 gi|91772989|ref|YP_565681.1| - 0.021 14.3 7.5 0.021 14.3 7.5 2.6 3 0 0 3 3 3 0 Zinc-ribbon Diphthami_syn_2 PF01902.17 gi|91772989|ref|YP_565681.1| - 0.075 12.5 0.1 0.14 11.6 0.1 1.4 1 0 0 1 1 1 0 Diphthamide synthase RecR PF02132.15 gi|91772989|ref|YP_565681.1| - 0.17 11.5 5.9 1.5 8.4 3.4 2.6 2 0 0 2 2 2 0 RecR protein DUF523 PF04463.12 gi|91772991|ref|YP_565683.1| - 2.7e-06 27.4 0.0 3.5e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF523) H_PPase PF03030.16 gi|91772992|ref|YP_565684.1| - 1.1e-267 889.9 54.2 1.3e-267 889.8 54.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase MarR_2 PF12802.7 gi|91772993|ref|YP_565685.1| - 5.8e-06 26.1 0.0 1.1e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|91772993|ref|YP_565685.1| - 0.00059 19.7 0.0 0.00099 19.0 0.0 1.3 1 0 0 1 1 1 1 HTH domain Mga PF05043.13 gi|91772993|ref|YP_565685.1| - 0.00083 19.9 0.1 0.0026 18.3 0.0 1.8 1 1 1 2 2 2 1 Mga helix-turn-helix domain Rrf2 PF02082.20 gi|91772993|ref|YP_565685.1| - 0.0027 18.0 0.0 0.0037 17.6 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_29 PF13551.6 gi|91772993|ref|YP_565685.1| - 0.0028 17.7 0.0 0.0048 16.9 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix GntR PF00392.21 gi|91772993|ref|YP_565685.1| - 0.0042 16.7 0.0 0.0075 15.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 gi|91772993|ref|YP_565685.1| - 0.0046 16.9 0.0 0.0085 16.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|91772993|ref|YP_565685.1| - 0.01 15.8 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|91772993|ref|YP_565685.1| - 0.013 15.1 0.0 0.025 14.2 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|91772993|ref|YP_565685.1| - 0.02 14.8 0.0 0.032 14.1 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_8 PF02954.19 gi|91772993|ref|YP_565685.1| - 0.021 14.6 0.0 0.045 13.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family HTH_28 PF13518.6 gi|91772993|ref|YP_565685.1| - 0.025 14.7 0.0 0.043 13.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_6 PF01418.17 gi|91772993|ref|YP_565685.1| - 0.028 14.4 0.0 0.054 13.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family Fe_dep_repress PF01325.19 gi|91772993|ref|YP_565685.1| - 0.03 14.5 0.0 0.077 13.2 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.10 gi|91772993|ref|YP_565685.1| - 0.036 13.9 0.0 0.063 13.1 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain SLM4 PF16818.5 gi|91772993|ref|YP_565685.1| - 0.059 13.3 0.0 0.071 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein SLM4 HTH_7 PF02796.15 gi|91772993|ref|YP_565685.1| - 0.075 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_10 PF04967.12 gi|91772993|ref|YP_565685.1| - 0.14 12.0 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain HTH_23 PF13384.6 gi|91772993|ref|YP_565685.1| - 0.14 12.0 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain DUF746 PF05344.11 gi|91772993|ref|YP_565685.1| - 0.14 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) UnbV_ASPIC PF07593.12 gi|91772994|ref|YP_565686.1| - 0.002 18.0 0.0 0.0043 17.0 0.0 1.5 1 0 0 1 1 1 1 ASPIC and UnbV YiaAB PF05360.14 gi|91772994|ref|YP_565686.1| - 0.078 13.2 0.3 0.14 12.4 0.3 1.3 1 0 0 1 1 1 0 yiaA/B two helix domain MerR_2 PF13591.6 gi|91772994|ref|YP_565686.1| - 0.08 12.8 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 MerR HTH family regulatory protein ABC_tran PF00005.27 gi|91772995|ref|YP_565687.1| - 2.2e-07 31.5 0.0 3.3e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|91772995|ref|YP_565687.1| - 0.0016 17.9 0.1 0.0018 17.8 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Qua1 PF16274.5 gi|91772995|ref|YP_565687.1| - 0.051 13.4 0.0 0.3 10.9 0.0 2.2 2 0 0 2 2 2 0 Qua1 domain AAA_21 PF13304.6 gi|91772995|ref|YP_565687.1| - 0.12 12.2 0.2 0.14 12.0 0.2 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system DEAD PF00270.29 gi|91772995|ref|YP_565687.1| - 0.13 12.1 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 DEAD/DEAH box helicase AMP-binding PF00501.28 gi|91772996|ref|YP_565688.1| - 2.7e-99 332.7 0.0 3.2e-99 332.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|91772996|ref|YP_565688.1| - 3e-27 95.4 0.2 9.3e-27 93.8 0.2 1.9 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|91772996|ref|YP_565688.1| - 1.4e-19 69.7 2.6 4.2e-19 68.2 2.6 1.9 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus OMPdecase PF00215.24 gi|91772997|ref|YP_565689.1| - 2.6e-39 135.1 0.1 3.3e-39 134.8 0.1 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Ribul_P_3_epim PF00834.19 gi|91772997|ref|YP_565689.1| - 0.00071 19.0 0.0 0.00088 18.7 0.0 1.2 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family PcrB PF01884.17 gi|91772997|ref|YP_565689.1| - 0.0015 18.1 0.4 0.02 14.4 0.1 2.4 2 1 1 3 3 3 1 PcrB family DHO_dh PF01180.21 gi|91772997|ref|YP_565689.1| - 0.072 12.3 0.1 0.1 11.8 0.1 1.3 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase NanE PF04131.14 gi|91772997|ref|YP_565689.1| - 0.077 12.2 0.7 5.4 6.2 0.2 2.7 2 2 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase CbiZ PF01955.18 gi|91772998|ref|YP_565690.1| - 1.3e-64 217.9 1.0 1.6e-64 217.5 1.0 1.1 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase HD_4 PF13328.6 gi|91772999|ref|YP_565691.1| - 4.3e-19 68.8 0.0 6.1e-19 68.3 0.0 1.2 1 0 0 1 1 1 1 HD domain HD PF01966.22 gi|91772999|ref|YP_565691.1| - 0.0014 18.8 0.2 0.0063 16.7 0.0 2.1 2 0 0 2 2 2 1 HD domain Phage_int_SAM_1 PF02899.17 gi|91772999|ref|YP_565691.1| - 0.083 13.2 0.0 4.4 7.7 0.0 2.3 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain TctA PF01970.16 gi|91773001|ref|YP_565693.1| - 3e-77 260.1 34.4 3.5e-77 259.9 34.4 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family DUF3139 PF11337.8 gi|91773001|ref|YP_565693.1| - 5 7.8 6.9 0.77 10.4 2.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) URO-D PF01208.17 gi|91773002|ref|YP_565694.1| - 6.6e-87 291.9 0.0 7.4e-87 291.7 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Desulfoferrodox PF01880.18 gi|91773003|ref|YP_565695.1| - 9.7e-27 93.4 0.4 1.1e-26 93.2 0.4 1.0 1 0 0 1 1 1 1 Desulfoferrodoxin Fer4_5 PF12801.7 gi|91773004|ref|YP_565696.1| - 2.4e-12 46.6 9.4 6.1e-10 38.9 1.2 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4 PF00037.27 gi|91773004|ref|YP_565696.1| - 1.9e-08 33.8 21.3 1.1e-05 25.1 2.3 3.7 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773004|ref|YP_565696.1| - 5e-07 29.8 25.3 2.2e-06 27.7 13.0 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91773004|ref|YP_565696.1| - 1e-06 28.7 15.3 3.5e-06 27.0 14.2 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91773004|ref|YP_565696.1| - 1e-06 28.7 15.5 0.0019 18.3 3.1 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773004|ref|YP_565696.1| - 1.3e-06 28.8 12.4 0.0035 17.9 1.4 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773004|ref|YP_565696.1| - 3e-05 23.9 21.0 0.0037 17.3 3.5 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91773004|ref|YP_565696.1| - 6.6e-05 23.1 11.7 0.00028 21.0 9.7 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91773004|ref|YP_565696.1| - 0.00012 22.5 14.9 0.085 13.4 4.5 3.2 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773004|ref|YP_565696.1| - 0.00071 19.5 22.3 0.0044 17.0 2.0 3.7 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91773004|ref|YP_565696.1| - 0.0014 19.5 17.5 0.018 16.0 3.3 3.0 3 1 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|91773004|ref|YP_565696.1| - 0.061 14.3 5.0 0.061 14.3 5.0 3.9 4 0 0 4 4 4 0 4Fe-4S binding domain Bestrophin PF01062.21 gi|91773004|ref|YP_565696.1| - 0.097 12.0 0.9 0.12 11.7 0.9 1.1 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel Fer4_8 PF13183.6 gi|91773004|ref|YP_565696.1| - 0.11 13.0 20.8 0.13 12.7 1.7 2.8 2 1 2 4 4 4 0 4Fe-4S dicluster domain YebO PF13974.6 gi|91773004|ref|YP_565696.1| - 0.21 11.7 0.2 0.39 10.8 0.2 1.4 1 0 0 1 1 1 0 YebO-like protein Fer4_4 PF12800.7 gi|91773004|ref|YP_565696.1| - 0.58 10.8 23.0 0.32 11.6 4.0 3.6 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|91773004|ref|YP_565696.1| - 9.1 7.2 15.1 4.6 8.2 1.7 2.6 2 1 0 3 3 2 0 4Fe-4S dicluster domain PBP PF01161.20 gi|91773005|ref|YP_565697.1| - 8.9e-30 103.7 0.0 1.1e-29 103.4 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Cupin_2 PF07883.11 gi|91773006|ref|YP_565698.1| - 3.1e-16 58.8 0.0 4.7e-16 58.3 0.0 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|91773006|ref|YP_565698.1| - 3.2e-07 30.3 0.0 4.3e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|91773006|ref|YP_565698.1| - 3.5e-05 23.8 0.0 4.2e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_1 PF00190.22 gi|91773006|ref|YP_565698.1| - 3.8e-05 23.3 0.0 4.6e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.12 gi|91773006|ref|YP_565698.1| - 0.0041 16.8 0.0 0.0051 16.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_6 PF12852.7 gi|91773006|ref|YP_565698.1| - 0.099 12.4 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Cupin CbiA PF01656.23 gi|91773007|ref|YP_565699.1| - 1.4e-18 67.2 0.1 1.8e-18 66.8 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|91773007|ref|YP_565699.1| - 9.1e-11 42.0 0.0 3.7e-10 40.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|91773007|ref|YP_565699.1| - 4.4e-09 36.1 0.2 1.3e-05 24.7 0.1 2.9 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|91773007|ref|YP_565699.1| - 2.9e-08 33.3 0.3 7.1e-08 32.0 0.1 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|91773007|ref|YP_565699.1| - 3.8e-05 23.3 0.0 0.001 18.6 0.3 2.0 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|91773007|ref|YP_565699.1| - 0.00021 20.8 0.1 0.0016 17.9 0.1 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NTPase_1 PF03266.15 gi|91773007|ref|YP_565699.1| - 0.00091 19.2 0.1 0.0016 18.4 0.1 1.3 1 0 0 1 1 1 1 NTPase AAA_26 PF13500.6 gi|91773007|ref|YP_565699.1| - 0.0026 17.6 1.0 0.02 14.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|91773007|ref|YP_565699.1| - 0.0042 16.8 0.1 0.0098 15.6 0.1 1.7 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|91773007|ref|YP_565699.1| - 0.0058 17.2 0.0 0.0088 16.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|91773007|ref|YP_565699.1| - 0.012 14.6 0.3 0.019 13.9 0.3 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF87 PF01935.17 gi|91773007|ref|YP_565699.1| - 0.014 15.5 0.5 0.028 14.5 0.1 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_16 PF13191.6 gi|91773007|ref|YP_565699.1| - 0.017 15.5 0.0 0.03 14.7 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 gi|91773007|ref|YP_565699.1| - 0.019 14.9 0.2 0.058 13.3 0.1 1.7 2 0 0 2 2 2 0 NACHT domain SRP54 PF00448.22 gi|91773007|ref|YP_565699.1| - 0.019 14.6 0.4 0.031 13.9 0.4 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|91773007|ref|YP_565699.1| - 0.021 14.6 0.2 0.055 13.2 0.1 1.7 2 0 0 2 2 2 0 AAA domain APS_kinase PF01583.20 gi|91773007|ref|YP_565699.1| - 0.037 13.9 0.1 0.057 13.3 0.1 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase CLP1_P PF16575.5 gi|91773007|ref|YP_565699.1| - 0.04 13.7 0.1 0.47 10.2 0.1 2.1 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop PRK PF00485.18 gi|91773007|ref|YP_565699.1| - 0.046 13.5 0.0 0.07 12.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family MobB PF03205.14 gi|91773007|ref|YP_565699.1| - 0.053 13.4 0.1 0.45 10.4 0.0 2.1 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.22 gi|91773007|ref|YP_565699.1| - 0.054 12.7 0.3 0.09 11.9 0.3 1.3 1 0 0 1 1 1 0 NB-ARC domain MipZ PF09140.11 gi|91773007|ref|YP_565699.1| - 0.12 11.7 0.4 0.23 10.7 0.4 1.4 1 0 0 1 1 1 0 ATPase MipZ IstB_IS21 PF01695.17 gi|91773007|ref|YP_565699.1| - 0.16 11.7 0.1 0.31 10.8 0.1 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Cation_efflux PF01545.21 gi|91773008|ref|YP_565700.1| - 4.3e-44 150.6 14.4 5.1e-44 150.4 14.4 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|91773008|ref|YP_565700.1| - 4.7e-21 74.7 2.6 1.1e-20 73.5 2.6 1.6 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF2663 PF10864.8 gi|91773008|ref|YP_565700.1| - 0.49 10.8 2.5 1.1 9.6 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2663) ATP1G1_PLM_MAT8 PF02038.16 gi|91773008|ref|YP_565700.1| - 1.6 8.2 4.6 1.4 8.4 0.2 2.7 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family ABC_trans_CmpB PF06541.11 gi|91773008|ref|YP_565700.1| - 7.8 6.7 11.0 0.11 12.8 0.7 2.7 3 0 0 3 3 3 0 Putative ABC-transporter type IV Chorismate_synt PF01264.21 gi|91773009|ref|YP_565701.1| - 8.4e-144 478.3 1.1 9.5e-144 478.1 1.1 1.0 1 0 0 1 1 1 1 Chorismate synthase Aminotran_1_2 PF00155.21 gi|91773010|ref|YP_565702.1| - 1.5e-60 205.3 0.0 1.7e-60 205.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|91773010|ref|YP_565702.1| - 0.016 13.7 0.1 0.025 13.1 0.1 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme AAL_decarboxy PF03306.13 gi|91773011|ref|YP_565703.1| - 8.9e-84 280.2 0.0 1e-83 280.0 0.0 1.0 1 0 0 1 1 1 1 Alpha-acetolactate decarboxylase ZnuA PF01297.17 gi|91773012|ref|YP_565704.1| - 1e-58 198.8 0.0 1.2e-58 198.5 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic ABC_tran PF00005.27 gi|91773013|ref|YP_565705.1| - 9.5e-32 110.4 0.0 1.3e-31 109.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773013|ref|YP_565705.1| - 2.6e-12 47.2 1.0 3.3e-05 23.9 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91773013|ref|YP_565705.1| - 1.8e-07 30.8 0.0 2.7e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|91773013|ref|YP_565705.1| - 0.0011 18.7 0.0 0.0023 17.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|91773013|ref|YP_565705.1| - 0.0019 17.9 0.1 0.0043 16.7 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|91773013|ref|YP_565705.1| - 0.0065 16.2 0.3 0.047 13.4 0.1 2.0 1 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|91773013|ref|YP_565705.1| - 0.023 15.2 0.2 0.04 14.4 0.2 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|91773013|ref|YP_565705.1| - 0.027 14.7 0.5 0.14 12.4 0.5 2.0 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|91773013|ref|YP_565705.1| - 0.062 13.3 0.8 0.33 10.9 0.6 2.3 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) MMR_HSR1 PF01926.23 gi|91773013|ref|YP_565705.1| - 0.078 13.1 0.5 0.35 11.0 0.5 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|91773013|ref|YP_565705.1| - 0.084 12.8 0.2 0.37 10.7 0.0 2.1 3 0 0 3 3 3 0 RsgA GTPase Adeno_IVa2 PF02456.15 gi|91773013|ref|YP_565705.1| - 0.098 11.4 0.0 0.16 10.7 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_16 PF13191.6 gi|91773013|ref|YP_565705.1| - 0.11 12.9 0.0 0.18 12.2 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Phage_fiber_2 PF03406.13 gi|91773013|ref|YP_565705.1| - 0.11 12.1 0.3 0.19 11.3 0.3 1.3 1 0 0 1 1 1 0 Phage tail fibre repeat AAA_27 PF13514.6 gi|91773013|ref|YP_565705.1| - 0.12 12.0 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain HTH_47 PF16221.5 gi|91773013|ref|YP_565705.1| - 0.16 11.5 0.0 0.33 10.5 0.0 1.5 1 0 0 1 1 1 0 winged helix-turn-helix AAA PF00004.29 gi|91773013|ref|YP_565705.1| - 0.4 11.1 1.4 3.9 7.9 1.4 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC-3 PF00950.17 gi|91773014|ref|YP_565706.1| - 3.3e-81 272.6 32.8 3.8e-81 272.4 32.8 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|91773014|ref|YP_565706.1| - 3.7e-12 45.9 28.6 6.1e-12 45.2 28.5 1.4 1 1 0 1 1 1 1 FecCD transport family SDF PF00375.18 gi|91773015|ref|YP_565707.1| - 3.9e-120 401.5 44.6 4.4e-120 401.3 44.6 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family dCache_1 PF02743.18 gi|91773016|ref|YP_565708.1| - 4.7e-23 82.3 3.4 4.7e-23 82.3 3.4 2.3 2 1 0 2 2 2 1 Cache domain HATPase_c PF02518.26 gi|91773016|ref|YP_565708.1| - 2.5e-19 69.8 1.4 4.2e-19 69.1 0.5 1.9 1 1 1 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91773016|ref|YP_565708.1| - 1.4e-05 25.0 2.3 0.00018 21.5 0.0 3.5 4 0 0 4 4 4 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 gi|91773016|ref|YP_565708.1| - 2.3e-05 24.7 1.9 0.0013 19.1 0.0 3.2 4 0 0 4 4 3 1 HAMP domain HATPase_c_5 PF14501.6 gi|91773016|ref|YP_565708.1| - 0.00089 19.1 3.4 0.0011 18.9 0.7 2.4 1 1 1 2 2 2 1 GHKL domain HATPase_c_2 PF13581.6 gi|91773016|ref|YP_565708.1| - 0.0027 17.7 0.1 0.01 15.8 0.0 2.0 1 1 1 2 2 2 1 Histidine kinase-like ATPase domain sCache_2 PF17200.4 gi|91773016|ref|YP_565708.1| - 0.013 15.3 0.1 0.013 15.3 0.1 2.4 3 0 0 3 3 3 0 Single Cache domain 2 Snapin_Pallidin PF14712.6 gi|91773016|ref|YP_565708.1| - 0.039 14.4 0.9 0.039 14.4 0.9 2.4 2 0 0 2 2 2 0 Snapin/Pallidin HATPase_c_3 PF13589.6 gi|91773016|ref|YP_565708.1| - 0.046 13.5 1.5 0.42 10.4 1.5 2.6 1 1 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPOB_a PF14689.6 gi|91773016|ref|YP_565708.1| - 0.054 13.2 0.4 0.23 11.2 0.1 2.3 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain DUF3053 PF11254.8 gi|91773016|ref|YP_565708.1| - 0.31 10.6 3.9 0.11 12.1 0.4 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3053) LpoB PF13036.6 gi|91773016|ref|YP_565708.1| - 1.9 8.4 6.2 0.55 10.2 0.7 2.5 2 0 0 2 2 2 0 Peptidoglycan-synthase activator LpoB HATPase_c PF02518.26 gi|91773017|ref|YP_565709.1| - 4.5e-30 104.5 0.0 8.2e-30 103.6 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|91773017|ref|YP_565709.1| - 2.2e-25 88.9 0.0 1.3e-07 31.6 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.7 gi|91773017|ref|YP_565709.1| - 3.1e-23 82.0 0.2 2.4e-07 30.9 0.0 3.6 3 0 0 3 3 3 3 PAS domain PAS_3 PF08447.12 gi|91773017|ref|YP_565709.1| - 1.4e-20 73.4 0.0 2.9e-15 56.3 0.0 3.7 3 0 0 3 3 3 2 PAS fold HisKA PF00512.25 gi|91773017|ref|YP_565709.1| - 4e-18 65.2 0.1 9.7e-18 64.0 0.1 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|91773017|ref|YP_565709.1| - 8.1e-16 58.2 0.0 4.5e-07 30.1 0.0 3.6 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.7 gi|91773017|ref|YP_565709.1| - 1.3e-10 41.0 0.0 1.5e-06 28.0 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_10 PF13596.6 gi|91773017|ref|YP_565709.1| - 0.0017 18.9 0.0 0.3 11.7 0.0 3.5 3 0 0 3 3 3 1 PAS domain HATPase_c_5 PF14501.6 gi|91773017|ref|YP_565709.1| - 0.024 14.5 0.0 0.076 12.9 0.0 1.9 1 0 0 1 1 1 0 GHKL domain Phyto_Pns9_10 PF05878.11 gi|91773017|ref|YP_565709.1| - 0.03 13.5 0.6 0.047 12.9 0.6 1.2 1 0 0 1 1 1 0 Phytoreovirus nonstructural protein Pns9/Pns10 PAS_7 PF12860.7 gi|91773017|ref|YP_565709.1| - 0.032 14.4 0.1 14 5.8 0.0 3.4 3 0 0 3 3 3 0 PAS fold HATPase_c_3 PF13589.6 gi|91773017|ref|YP_565709.1| - 0.036 13.9 0.0 0.083 12.7 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Lyase_1 PF00206.20 gi|91773018|ref|YP_565710.1| - 7.6e-62 209.5 0.0 1.2e-61 208.8 0.0 1.3 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|91773018|ref|YP_565710.1| - 4.6e-13 49.7 0.1 2.3e-12 47.5 0.0 2.3 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal Asparaginase PF00710.20 gi|91773019|ref|YP_565711.1| - 8.3e-60 201.6 1.8 1.3e-59 201.0 1.5 1.5 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|91773019|ref|YP_565711.1| - 9e-35 119.3 0.0 2.8e-33 114.5 0.0 2.4 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|91773019|ref|YP_565711.1| - 6.5e-18 63.8 0.1 1.4e-17 62.8 0.1 1.6 1 0 0 1 1 1 1 GatD N-terminal domain Asp_Glu_race PF01177.22 gi|91773019|ref|YP_565711.1| - 0.0011 18.9 0.1 0.0029 17.5 0.1 1.6 1 1 0 1 1 1 1 Asp/Glu/Hydantoin racemase Peripla_BP_4 PF13407.6 gi|91773019|ref|YP_565711.1| - 0.0041 16.7 0.1 0.59 9.6 0.0 2.3 1 1 1 2 2 2 2 Periplasmic binding protein domain DUF2642 PF10842.8 gi|91773019|ref|YP_565711.1| - 0.073 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2642) Pilin_N PF07790.11 gi|91773020|ref|YP_565712.1| - 2.1e-25 89.4 2.7 4e-25 88.5 2.7 1.5 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal DUF5371 PF17341.2 gi|91773021|ref|YP_565713.1| - 1.4e-39 134.1 6.5 1.6e-39 133.9 6.5 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5371) DUF1297 PF06973.12 gi|91773022|ref|YP_565714.1| - 1e-76 256.7 0.0 1.4e-76 256.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|91773022|ref|YP_565714.1| - 3.8e-43 146.3 0.0 7.2e-43 145.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) SpoIIM PF01944.17 gi|91773023|ref|YP_565715.1| - 4e-32 111.4 18.3 5.3e-32 111.0 18.3 1.1 1 0 0 1 1 1 1 Stage II sporulation protein M DUF63 PF01889.17 gi|91773024|ref|YP_565716.1| - 2.4e-106 355.9 16.9 2.6e-106 355.8 16.9 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 VKOR PF07884.14 gi|91773024|ref|YP_565716.1| - 0.02 15.1 4.1 0.02 15.1 4.1 2.6 2 1 1 3 3 3 0 Vitamin K epoxide reductase family Phage_holin_5_2 PF16079.5 gi|91773024|ref|YP_565716.1| - 1.6 9.1 7.1 0.7 10.3 1.1 3.1 2 2 1 4 4 4 0 Phage holin family Hol44, in holin superfamily V Tr-sialidase_C PF11052.8 gi|91773024|ref|YP_565716.1| - 2.7 8.2 5.7 11 6.2 1.7 2.5 2 0 0 2 2 2 0 Trans-sialidase of Trypanosoma hydrophobic C-terminal Fe-ADH_2 PF13685.6 gi|91773025|ref|YP_565717.1| - 8.1e-74 248.5 6.3 1.1e-73 248.0 6.3 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|91773025|ref|YP_565717.1| - 3e-27 95.4 6.2 1.5e-26 93.1 6.2 1.8 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|91773025|ref|YP_565717.1| - 7.7e-07 28.5 0.4 1.6e-06 27.5 0.4 1.6 1 1 0 1 1 1 1 3-dehydroquinate synthase Methyltransf_18 PF12847.7 gi|91773025|ref|YP_565717.1| - 0.0088 16.0 0.0 0.019 14.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0179 PF03684.13 gi|91773026|ref|YP_565718.1| - 7.4e-51 171.7 2.4 8.3e-51 171.6 2.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) DUF2150 PF09920.9 gi|91773027|ref|YP_565719.1| - 3.5e-70 235.8 5.8 4.1e-70 235.6 5.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) CbiX PF01903.17 gi|91773028|ref|YP_565720.1| - 1.2e-27 96.4 0.0 1.3e-27 96.2 0.0 1.0 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|91773028|ref|YP_565720.1| - 0.00054 19.4 0.1 0.00063 19.1 0.1 1.1 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|91773028|ref|YP_565720.1| - 0.041 13.0 0.0 0.048 12.7 0.0 1.1 1 0 0 1 1 1 0 Ferrochelatase Mur_ligase_M PF08245.12 gi|91773029|ref|YP_565721.1| - 5.1e-06 26.6 2.0 1.3e-05 25.3 2.0 1.7 1 1 0 1 1 1 1 Mur ligase middle domain Oxidored_nitro PF00148.19 gi|91773030|ref|YP_565722.1| - 2.8e-18 65.9 0.1 4.4e-18 65.2 0.1 1.3 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Tipalpha PF16753.5 gi|91773030|ref|YP_565722.1| - 0.054 13.3 0.4 0.097 12.5 0.1 1.5 2 0 0 2 2 2 0 TNF-alpha-Inducing protein of Helicobacter SHOCT PF09851.9 gi|91773030|ref|YP_565722.1| - 0.084 12.6 0.1 0.16 11.7 0.1 1.5 1 0 0 1 1 1 0 Short C-terminal domain GvpG PF05120.12 gi|91773030|ref|YP_565722.1| - 0.14 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Gas vesicle protein G Fer4_NifH PF00142.18 gi|91773031|ref|YP_565723.1| - 7.9e-92 307.5 1.9 9.1e-92 307.3 1.9 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ParA PF10609.9 gi|91773031|ref|YP_565723.1| - 3.4e-12 46.3 0.2 7.4e-12 45.2 0.2 1.6 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|91773031|ref|YP_565723.1| - 2.6e-09 37.2 0.0 7.3e-09 35.8 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|91773031|ref|YP_565723.1| - 1.1e-07 32.0 0.6 5.1e-07 29.8 0.1 2.1 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|91773031|ref|YP_565723.1| - 2e-06 27.3 0.3 6.7e-06 25.5 0.3 1.9 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_24 PF13479.6 gi|91773031|ref|YP_565723.1| - 9.6e-05 22.2 0.2 0.0002 21.1 0.1 1.7 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 gi|91773031|ref|YP_565723.1| - 0.0009 18.3 0.1 0.0013 17.8 0.1 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MipZ PF09140.11 gi|91773031|ref|YP_565723.1| - 0.0038 16.6 0.2 0.046 13.0 0.0 2.1 2 0 0 2 2 2 1 ATPase MipZ AAA_16 PF13191.6 gi|91773031|ref|YP_565723.1| - 0.007 16.8 0.0 0.022 15.2 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain SRP54 PF00448.22 gi|91773031|ref|YP_565723.1| - 0.015 14.9 0.4 0.036 13.7 0.0 1.9 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain ATP_bind_1 PF03029.17 gi|91773031|ref|YP_565723.1| - 0.022 14.5 0.2 0.18 11.5 0.2 2.2 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_25 PF13481.6 gi|91773031|ref|YP_565723.1| - 0.054 13.1 0.1 0.16 11.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|91773031|ref|YP_565723.1| - 0.095 12.2 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF87 PF01935.17 gi|91773031|ref|YP_565723.1| - 0.15 12.1 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain GATase_3 PF07685.14 gi|91773032|ref|YP_565724.1| - 1.7e-41 142.0 0.3 2.6e-41 141.4 0.3 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|91773032|ref|YP_565724.1| - 8.4e-18 64.9 0.5 5.6e-12 45.9 0.1 2.5 1 1 1 2 2 2 2 AAA domain CbiA PF01656.23 gi|91773032|ref|YP_565724.1| - 2.5e-17 63.1 0.0 5.2e-17 62.1 0.0 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MobB PF03205.14 gi|91773032|ref|YP_565724.1| - 0.012 15.5 0.0 0.025 14.5 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SNO PF01174.19 gi|91773032|ref|YP_565724.1| - 0.016 15.1 0.0 0.048 13.5 0.0 1.8 2 0 0 2 2 2 0 SNO glutamine amidotransferase family GATase PF00117.28 gi|91773032|ref|YP_565724.1| - 0.029 14.1 0.1 0.22 11.3 0.0 2.2 2 0 0 2 2 2 0 Glutamine amidotransferase class-I Peptidase_S51 PF03575.17 gi|91773032|ref|YP_565724.1| - 0.03 14.0 0.0 0.049 13.3 0.0 1.3 1 0 0 1 1 1 0 Peptidase family S51 tRNA_int_endo PF01974.17 gi|91773033|ref|YP_565725.1| - 1.8e-50 169.0 0.1 5.2e-25 87.3 0.0 2.3 2 0 0 2 2 2 2 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|91773033|ref|YP_565725.1| - 4.5e-44 148.0 2.0 3.5e-22 77.8 0.0 2.4 2 0 0 2 2 2 2 tRNA intron endonuclease, N-terminal domain tRNA_int_end_N2 PF12928.7 gi|91773033|ref|YP_565725.1| - 0.00045 20.3 0.0 0.37 11.0 0.0 2.4 2 0 0 2 2 2 2 tRNA-splicing endonuclease subunit sen54 N-term Sen15 PF09631.10 gi|91773033|ref|YP_565725.1| - 0.024 14.9 0.0 0.14 12.4 0.0 2.2 2 0 0 2 2 2 0 Sen15 protein tRNA-synt_2c PF01411.19 gi|91773034|ref|YP_565726.1| - 3.5e-15 55.5 0.0 4.9e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|91773034|ref|YP_565726.1| - 5.2e-14 52.1 0.9 8e-14 51.5 0.2 1.7 2 0 0 2 2 2 1 Threonyl and Alanyl tRNA synthetase second additional domain Cytochrom_C_asm PF01578.20 gi|91773035|ref|YP_565727.1| - 9.2e-32 110.5 23.5 9.2e-32 110.5 23.5 2.5 2 1 0 3 3 3 1 Cytochrome C assembly protein Rubrerythrin PF02915.17 gi|91773036|ref|YP_565728.1| - 9.3e-25 87.6 7.1 9.7e-24 84.3 7.1 2.0 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|91773036|ref|YP_565728.1| - 1.9e-05 24.6 3.9 5.8e-05 23.1 3.2 2.1 1 1 1 2 2 2 1 Ferritin-like domain DZR PF12773.7 gi|91773036|ref|YP_565728.1| - 0.019 15.0 0.5 0.028 14.4 0.5 1.3 1 0 0 1 1 1 0 Double zinc ribbon RB_A PF01858.17 gi|91773036|ref|YP_565728.1| - 0.12 12.2 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain RecR PF02132.15 gi|91773036|ref|YP_565728.1| - 0.13 11.8 1.6 0.3 10.7 1.6 1.5 1 0 0 1 1 1 0 RecR protein zf-C2H2_6 PF13912.6 gi|91773036|ref|YP_565728.1| - 1.4 9.0 3.4 6.7 6.8 0.3 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger Desulfoferrod_N PF06397.12 gi|91773036|ref|YP_565728.1| - 2.9 7.6 7.2 0.14 11.8 1.4 1.8 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain DUF3188 PF11384.8 gi|91773037|ref|YP_565729.1| - 0.57 9.9 12.0 0.71 9.6 2.2 3.6 2 2 1 3 3 3 0 Protein of unknown function (DUF3188) EMP70 PF02990.16 gi|91773037|ref|YP_565729.1| - 1.1 7.9 11.7 0.24 10.0 8.3 1.7 1 1 0 1 1 1 0 Endomembrane protein 70 Peripla_BP_2 PF01497.18 gi|91773038|ref|YP_565730.1| - 2.3e-25 89.5 0.0 3.2e-25 89.1 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein MCD PF05292.11 gi|91773038|ref|YP_565730.1| - 0.12 12.0 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase C-terminal domain FecCD PF01032.18 gi|91773039|ref|YP_565731.1| - 8.9e-92 307.4 29.6 1.1e-91 307.1 29.6 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|91773039|ref|YP_565731.1| - 1.4e-06 28.0 13.6 3.4e-06 26.7 13.2 1.8 1 1 0 1 1 1 1 ABC 3 transport family ABC_tran PF00005.27 gi|91773040|ref|YP_565732.1| - 1.4e-34 119.5 0.0 2e-34 119.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773040|ref|YP_565732.1| - 8.3e-10 39.0 0.0 0.00056 19.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|91773040|ref|YP_565732.1| - 1.5e-05 25.6 0.2 4e-05 24.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|91773040|ref|YP_565732.1| - 3.3e-05 23.9 0.0 6.1e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 gi|91773040|ref|YP_565732.1| - 6.8e-05 22.4 0.1 0.19 11.2 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91773040|ref|YP_565732.1| - 0.00018 21.2 0.0 0.00043 20.0 0.0 1.6 2 0 0 2 2 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|91773040|ref|YP_565732.1| - 0.00021 21.6 1.3 0.005 17.1 1.3 2.1 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 gi|91773040|ref|YP_565732.1| - 0.0004 19.3 0.1 1.1 8.0 0.0 3.0 2 1 0 2 2 2 2 Predicted ATPase of the ABC class NB-ARC PF00931.22 gi|91773040|ref|YP_565732.1| - 0.00054 19.2 0.4 0.0057 15.9 0.4 2.0 1 1 0 1 1 1 1 NB-ARC domain AAA_16 PF13191.6 gi|91773040|ref|YP_565732.1| - 0.00077 19.9 0.1 0.0012 19.3 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 gi|91773040|ref|YP_565732.1| - 0.006 16.3 0.1 0.1 12.3 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 gi|91773040|ref|YP_565732.1| - 0.011 15.8 0.0 0.2 11.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|91773040|ref|YP_565732.1| - 0.011 15.5 0.1 0.028 14.2 0.1 1.7 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 gi|91773040|ref|YP_565732.1| - 0.012 15.1 0.4 4.1 6.8 0.7 2.2 1 1 1 2 2 2 0 Bacterial TniB protein HSM3_N PF18795.1 gi|91773040|ref|YP_565732.1| - 0.016 14.6 0.4 0.03 13.8 0.4 1.4 1 1 0 1 1 1 0 DNA mismatch repair protein HSM3, N terminal domain Mg_chelatase PF01078.21 gi|91773040|ref|YP_565732.1| - 0.016 14.6 0.1 0.053 12.9 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Rad17 PF03215.15 gi|91773040|ref|YP_565732.1| - 0.018 14.9 0.0 0.039 13.9 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain NTPase_1 PF03266.15 gi|91773040|ref|YP_565732.1| - 0.038 13.9 0.8 2.1 8.2 0.8 2.4 1 1 0 1 1 1 0 NTPase ATPase_2 PF01637.18 gi|91773040|ref|YP_565732.1| - 0.062 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|91773040|ref|YP_565732.1| - 0.074 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|91773040|ref|YP_565732.1| - 0.088 12.7 0.4 0.49 10.3 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA_27 PF13514.6 gi|91773040|ref|YP_565732.1| - 0.12 12.0 0.0 0.24 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain NOG1 PF06858.14 gi|91773040|ref|YP_565732.1| - 0.12 12.1 0.1 0.27 11.1 0.1 1.5 1 0 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) YozD PF14162.6 gi|91773040|ref|YP_565732.1| - 0.13 12.6 0.0 0.24 11.7 0.0 1.4 1 0 0 1 1 1 0 YozD-like protein SbcCD_C PF13558.6 gi|91773040|ref|YP_565732.1| - 0.18 12.1 0.0 1.7 8.9 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_19 PF13245.6 gi|91773040|ref|YP_565732.1| - 0.19 12.1 0.7 3 8.2 0.7 2.2 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|91773040|ref|YP_565732.1| - 0.19 10.3 0.0 7.9 5.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain Flavin_Reduct PF01613.18 gi|91773041|ref|YP_565733.1| - 9.8e-16 58.2 0.0 1.2e-15 57.8 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 gi|91773041|ref|YP_565733.1| - 0.04 13.7 0.0 0.057 13.2 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF447) CarS-like PF01864.17 gi|91773042|ref|YP_565734.1| - 8.3e-50 169.2 2.4 9.5e-50 169.0 2.4 1.0 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|91773042|ref|YP_565734.1| - 4.7e-07 29.9 4.7 4.7e-07 29.9 4.7 2.0 1 1 1 2 2 2 1 Cytidylyltransferase family Pribosyltran PF00156.27 gi|91773043|ref|YP_565735.1| - 7.7e-14 51.5 1.6 9.8e-14 51.2 1.6 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|91773043|ref|YP_565735.1| - 0.0032 16.9 0.2 0.0063 16.0 0.2 1.4 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase Prismane PF03063.20 gi|91773044|ref|YP_565736.1| - 2.2e-165 551.2 0.0 2.5e-165 551.1 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Cupin_2 PF07883.11 gi|91773045|ref|YP_565737.1| - 2.7e-13 49.4 0.0 3.4e-13 49.1 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|91773045|ref|YP_565737.1| - 0.00062 19.7 0.0 0.00076 19.4 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Pirin_C PF05726.13 gi|91773045|ref|YP_565737.1| - 0.0063 16.9 0.0 0.0078 16.6 0.0 1.2 1 0 0 1 1 1 1 Pirin C-terminal cupin domain Cupin_1 PF00190.22 gi|91773045|ref|YP_565737.1| - 0.0078 15.8 0.0 0.0098 15.5 0.0 1.2 1 0 0 1 1 1 1 Cupin PCO_ADO PF07847.12 gi|91773045|ref|YP_565737.1| - 0.02 14.4 0.0 0.02 14.4 0.0 1.1 1 0 0 1 1 1 0 PCO_ADO Cupin_7 PF12973.7 gi|91773045|ref|YP_565737.1| - 0.055 13.4 0.0 0.067 13.1 0.0 1.2 1 0 0 1 1 1 0 ChrR Cupin-like domain GARS_A PF01071.19 gi|91773047|ref|YP_565739.1| - 7e-56 189.1 0.0 1.3e-55 188.2 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|91773047|ref|YP_565739.1| - 1.6e-24 86.5 0.4 3.2e-24 85.5 0.4 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|91773047|ref|YP_565739.1| - 1.5e-14 54.0 0.2 2.1e-13 50.3 0.1 2.3 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.6 gi|91773047|ref|YP_565739.1| - 0.005 16.5 0.0 0.012 15.2 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|91773047|ref|YP_565739.1| - 0.024 14.7 0.0 0.053 13.6 0.0 1.7 1 1 0 1 1 1 0 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|91773047|ref|YP_565739.1| - 0.065 12.7 0.0 0.14 11.7 0.0 1.5 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_ST PF14397.6 gi|91773047|ref|YP_565739.1| - 0.078 12.2 0.0 1 8.5 0.0 2.1 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp CoA_binding_3 PF13727.6 gi|91773047|ref|YP_565739.1| - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 CoA-binding domain GSH-S_ATP PF02955.16 gi|91773047|ref|YP_565739.1| - 0.12 11.8 0.0 0.25 10.7 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain OTCace PF00185.24 gi|91773048|ref|YP_565740.1| - 7.3e-60 201.6 0.0 1.2e-59 200.9 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|91773048|ref|YP_565740.1| - 2.1e-55 186.8 0.5 3.1e-55 186.3 0.5 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Fer4 PF00037.27 gi|91773049|ref|YP_565741.1| - 2.7e-08 33.3 12.2 1.5e-05 24.6 3.0 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|91773049|ref|YP_565741.1| - 4.3e-07 29.7 11.3 0.00049 20.1 4.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91773049|ref|YP_565741.1| - 1.7e-06 28.0 6.2 0.00024 21.2 0.8 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91773049|ref|YP_565741.1| - 4.2e-06 26.8 3.0 0.00084 19.5 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773049|ref|YP_565741.1| - 5.7e-06 26.8 18.7 7.2e-05 23.3 8.4 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91773049|ref|YP_565741.1| - 6.8e-06 26.9 10.4 0.0066 17.4 10.5 2.4 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|91773049|ref|YP_565741.1| - 0.00044 21.0 10.5 0.23 12.5 0.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91773049|ref|YP_565741.1| - 0.00051 20.4 3.5 0.029 14.8 0.1 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91773049|ref|YP_565741.1| - 0.00059 19.9 11.8 0.014 15.5 12.6 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91773049|ref|YP_565741.1| - 0.00059 20.3 2.3 0.21 12.2 0.1 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91773049|ref|YP_565741.1| - 0.0014 19.0 10.3 0.15 12.6 3.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|91773049|ref|YP_565741.1| - 0.013 15.6 12.1 0.24 11.6 1.9 2.5 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91773049|ref|YP_565741.1| - 1.9 8.7 9.9 2.1 8.6 2.2 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773049|ref|YP_565741.1| - 4.1 8.0 10.1 3.2 8.4 4.5 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Glyoxalase PF00903.25 gi|91773050|ref|YP_565742.1| - 0.00038 20.6 0.0 0.0073 16.5 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Ala_racemase_N PF01168.20 gi|91773052|ref|YP_565744.1| - 1.2e-25 90.4 0.0 1.5e-25 90.1 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Mito_fiss_Elm1 PF06258.11 gi|91773052|ref|YP_565744.1| - 0.0015 17.7 0.0 0.0021 17.3 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial fission ELM1 Orn_Arg_deC_N PF02784.16 gi|91773052|ref|YP_565744.1| - 0.015 14.6 0.3 0.025 13.9 0.3 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DUF4559 PF15112.6 gi|91773052|ref|YP_565744.1| - 0.2 11.3 2.2 2 8.0 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4559) NBD94 PF16830.5 gi|91773052|ref|YP_565744.1| - 0.37 11.2 7.1 0.4 11.1 0.1 3.3 3 1 0 3 3 3 0 Nucleotide-Binding Domain 94 of RH TrkH PF02386.16 gi|91773053|ref|YP_565745.1| - 1.8e-67 228.0 19.3 2.3e-66 224.3 19.3 2.1 1 1 0 1 1 1 1 Cation transport protein DUF5554 PF17709.1 gi|91773053|ref|YP_565745.1| - 0.055 13.6 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5554) PufQ PF05398.11 gi|91773053|ref|YP_565745.1| - 0.77 9.9 0.0 0.77 9.9 0.0 2.6 3 0 0 3 3 3 0 PufQ cytochrome subunit Rubrerythrin PF02915.17 gi|91773054|ref|YP_565746.1| - 0.00047 20.6 0.4 0.00054 20.4 0.4 1.1 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.10 gi|91773054|ref|YP_565746.1| - 0.002 18.5 0.3 0.0025 18.1 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) DUF3231 PF11553.8 gi|91773054|ref|YP_565746.1| - 0.0089 15.7 0.4 0.0097 15.6 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3231) COQ7 PF03232.13 gi|91773054|ref|YP_565746.1| - 0.011 15.5 0.3 0.013 15.2 0.3 1.1 1 0 0 1 1 1 0 Ubiquinone biosynthesis protein COQ7 Ferritin_2 PF13668.6 gi|91773054|ref|YP_565746.1| - 0.075 13.2 0.0 0.091 13.0 0.0 1.1 1 0 0 1 1 1 0 Ferritin-like domain Rubrerythrin PF02915.17 gi|91773055|ref|YP_565747.1| - 3.6e-05 24.2 0.0 4.1e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Rubrerythrin COQ7 PF03232.13 gi|91773055|ref|YP_565747.1| - 0.00025 20.9 0.0 0.00029 20.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 Ferritin-like PF12902.7 gi|91773055|ref|YP_565747.1| - 0.021 14.7 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 Ferritin-like DUF2383 PF09537.10 gi|91773055|ref|YP_565747.1| - 0.053 13.9 0.0 0.08 13.3 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF2383) Ferritin_2 PF13668.6 gi|91773055|ref|YP_565747.1| - 0.064 13.5 0.0 0.072 13.3 0.0 1.1 1 0 0 1 1 1 0 Ferritin-like domain Med16 PF11635.8 gi|91773055|ref|YP_565747.1| - 0.078 10.9 0.1 0.087 10.7 0.1 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 Transposase_mut PF00872.18 gi|91773056|ref|YP_565748.1| - 9.5e-113 376.9 3.9 1.2e-112 376.6 3.9 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|91773056|ref|YP_565748.1| - 3.1e-10 40.4 0.0 8.9e-10 38.9 0.0 1.8 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|91773056|ref|YP_565748.1| - 0.00019 21.0 0.7 0.00039 20.0 0.7 1.5 1 1 0 1 1 1 1 Transposase IS66 family DUF4423 PF14394.6 gi|91773056|ref|YP_565748.1| - 0.033 13.9 0.3 0.12 12.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) DDE_Tnp_IS240 PF13610.6 gi|91773056|ref|YP_565748.1| - 0.041 14.1 5.7 5.7 7.2 4.1 2.9 2 1 0 2 2 2 0 DDE domain Hexapep PF00132.24 gi|91773057|ref|YP_565749.1| - 6.9e-19 66.8 16.6 8.7e-10 37.9 2.3 4.8 4 1 1 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|91773057|ref|YP_565749.1| - 1.4e-08 34.4 18.0 1.5e-05 24.7 5.5 4.6 2 2 4 6 6 6 4 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|91773057|ref|YP_565749.1| - 0.0062 15.5 0.5 0.1 11.5 0.4 2.2 1 1 1 2 2 2 2 L-fucokinase DDE_Tnp_1 PF01609.21 gi|91773058|ref|YP_565750.1| - 3.5e-10 39.9 0.4 4.2e-10 39.6 0.4 1.1 1 0 0 1 1 1 1 Transposase DDE domain Iso_dh PF00180.20 gi|91773061|ref|YP_565753.1| - 3.8e-84 282.8 0.0 4.5e-84 282.6 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase MS_channel PF00924.18 gi|91773062|ref|YP_565754.1| - 9.7e-24 84.1 4.3 9.7e-24 84.1 4.3 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel Cauli_AT PF03233.13 gi|91773062|ref|YP_565754.1| - 0.15 12.0 5.2 0.11 12.4 3.3 1.8 2 0 0 2 2 2 0 Aphid transmission protein Polysacc_synt_C PF14667.6 gi|91773062|ref|YP_565754.1| - 0.16 12.0 8.7 0.27 11.3 8.7 1.4 1 0 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain Phage_holin_5_2 PF16079.5 gi|91773062|ref|YP_565754.1| - 0.23 11.8 3.3 0.83 10.0 3.3 2.0 1 0 0 1 1 1 0 Phage holin family Hol44, in holin superfamily V Caps_synth_CapC PF14102.6 gi|91773062|ref|YP_565754.1| - 0.26 11.7 7.8 0.53 10.7 7.8 1.5 1 0 0 1 1 1 0 Capsule biosynthesis CapC DUF2975 PF11188.8 gi|91773062|ref|YP_565754.1| - 1.5 8.7 5.7 2.4 8.0 5.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) LMBR1 PF04791.16 gi|91773062|ref|YP_565754.1| - 8.3 5.2 10.3 0.55 9.1 4.6 1.7 2 0 0 2 2 2 0 LMBR1-like membrane protein HMGL-like PF00682.19 gi|91773063|ref|YP_565755.1| - 1.2e-39 136.5 0.0 1.6e-39 136.1 0.0 1.1 1 0 0 1 1 1 1 HMGL-like Mor PF08765.11 gi|91773063|ref|YP_565755.1| - 0.13 12.3 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Mor transcription activator family ACT PF01842.25 gi|91773064|ref|YP_565756.1| - 2.4e-05 24.0 0.0 6.2e-05 22.7 0.0 1.7 1 0 0 1 1 1 1 ACT domain F-box PF00646.33 gi|91773064|ref|YP_565756.1| - 0.18 11.7 0.0 3.4 7.7 0.0 2.3 2 0 0 2 2 2 0 F-box domain FAD_binding_3 PF01494.19 gi|91773065|ref|YP_565757.1| - 2.9e-15 56.4 2.0 4.4e-09 36.1 0.1 2.6 2 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|91773065|ref|YP_565757.1| - 9.1e-09 35.2 0.4 1.5e-08 34.5 0.4 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|91773065|ref|YP_565757.1| - 1.7e-07 30.8 1.4 2.7e-07 30.1 1.4 1.4 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 gi|91773065|ref|YP_565757.1| - 3.4e-07 29.6 0.9 4.1e-06 26.1 0.9 2.0 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_2 PF07992.14 gi|91773065|ref|YP_565757.1| - 6.4e-06 25.6 3.2 9.2e-06 25.1 0.2 2.4 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|91773065|ref|YP_565757.1| - 7.3e-06 25.1 0.4 0.0066 15.3 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase DAO PF01266.24 gi|91773065|ref|YP_565757.1| - 1.5e-05 24.7 2.8 0.00012 21.8 1.2 2.3 1 1 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|91773065|ref|YP_565757.1| - 4.8e-05 22.3 1.0 7.4e-05 21.6 0.1 1.6 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|91773065|ref|YP_565757.1| - 0.00012 22.2 0.7 0.00058 20.0 0.1 2.4 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|91773065|ref|YP_565757.1| - 0.0018 17.5 0.3 0.0031 16.6 0.3 1.4 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|91773065|ref|YP_565757.1| - 0.0024 17.0 0.7 0.0058 15.7 0.3 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|91773065|ref|YP_565757.1| - 0.11 11.7 0.0 0.11 11.7 0.0 2.3 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 gi|91773065|ref|YP_565757.1| - 0.13 11.4 0.2 0.29 10.3 0.2 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase EPSP_synthase PF00275.20 gi|91773066|ref|YP_565758.1| - 1.2e-113 380.0 0.4 1.4e-113 379.8 0.4 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Cadherin_5 PF17892.1 gi|91773066|ref|YP_565758.1| - 0.1 12.6 0.1 0.61 10.1 0.1 2.4 1 1 0 1 1 1 0 Cadherin-like domain Thymidylat_synt PF00303.19 gi|91773067|ref|YP_565759.1| - 8.8e-21 74.2 0.1 1e-20 74.0 0.1 1.1 1 0 0 1 1 1 1 Thymidylate synthase T3SchapCesA PF11439.8 gi|91773067|ref|YP_565759.1| - 0.025 14.7 0.0 0.7 10.1 0.0 2.3 2 0 0 2 2 2 0 Type III secretion system filament chaperone CesA MIX PF18529.1 gi|91773067|ref|YP_565759.1| - 0.086 12.5 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins DUF488 PF04343.13 gi|91773069|ref|YP_565761.1| - 4.3e-20 72.5 0.0 6.2e-20 72.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF488 Peptidase_M48 PF01435.18 gi|91773070|ref|YP_565762.1| - 1.9e-34 119.2 0.0 3.2e-34 118.4 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|91773070|ref|YP_565762.1| - 0.00028 20.2 0.0 0.00042 19.6 0.0 1.4 1 0 0 1 1 1 1 BlaR1 peptidase M56 Yip1 PF04893.17 gi|91773070|ref|YP_565762.1| - 0.0074 16.0 2.1 0.0074 16.0 2.1 2.1 2 0 0 2 2 2 1 Yip1 domain BSP PF04450.12 gi|91773070|ref|YP_565762.1| - 0.02 14.7 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Peptidase of plants and bacteria DUF4157 PF13699.6 gi|91773070|ref|YP_565762.1| - 0.04 14.2 0.3 0.2 11.9 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4157) DELLA PF12041.8 gi|91773071|ref|YP_565763.1| - 0.085 12.8 0.5 0.11 12.4 0.5 1.2 1 0 0 1 1 1 0 Transcriptional regulator DELLA protein N terminal FeoB_C PF07664.12 gi|91773071|ref|YP_565763.1| - 0.11 12.2 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B C terminus Fn_bind PF02986.14 gi|91773071|ref|YP_565763.1| - 0.46 10.3 4.0 2.1 8.1 0.1 2.3 2 0 0 2 2 2 0 Fibronectin binding repeat LPD39 PF18858.1 gi|91773072|ref|YP_565764.1| - 0.001 19.2 7.4 0.001 19.2 7.4 2.7 1 1 1 2 2 2 1 Large polyvalent protein associated domain 39 DUF3567 PF12091.8 gi|91773072|ref|YP_565764.1| - 0.019 15.1 2.5 0.12 12.5 0.2 3.0 3 0 0 3 3 2 0 Protein of unknown function (DUF3567) ApoLp-III PF07464.11 gi|91773072|ref|YP_565764.1| - 0.07 13.2 10.6 0.024 14.7 4.6 2.7 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Bul1_C PF04426.12 gi|91773072|ref|YP_565764.1| - 0.1 12.0 3.2 0.19 11.1 3.2 1.4 1 0 0 1 1 1 0 Bul1 C terminus Laminin_II PF06009.12 gi|91773072|ref|YP_565764.1| - 1.2 9.1 9.4 4.1 7.4 2.7 2.8 1 1 2 3 3 3 0 Laminin Domain II DUF5344 PF17279.2 gi|91773072|ref|YP_565764.1| - 1.6 9.4 11.6 0.23 12.1 3.3 2.8 2 1 0 2 2 2 0 Family of unknown function (DUF5344) Syntaxin_2 PF14523.6 gi|91773072|ref|YP_565764.1| - 2 8.8 9.3 1.8 9.0 4.0 2.8 1 1 1 2 2 2 0 Syntaxin-like protein SAM_Exu PF18609.1 gi|91773072|ref|YP_565764.1| - 2.1 8.5 5.7 0.87 9.7 0.3 2.9 3 0 0 3 3 3 0 Exuperantia SAM-like domain NPV_P10 PF05531.12 gi|91773072|ref|YP_565764.1| - 2.9 8.4 5.8 1.4 9.4 0.4 2.8 1 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein SYCE1 PF15233.6 gi|91773072|ref|YP_565764.1| - 6 6.9 13.3 0.37 10.9 6.7 2.1 2 0 0 2 2 2 0 Synaptonemal complex central element protein 1 Prominin PF05478.11 gi|91773072|ref|YP_565764.1| - 7.2 4.4 5.7 1.9 6.4 2.4 1.5 1 1 0 1 1 1 0 Prominin DivIC PF04977.15 gi|91773072|ref|YP_565764.1| - 7.4 6.4 11.0 1.8 8.4 2.9 3.7 4 0 0 4 4 4 0 Septum formation initiator KfrA_N PF11740.8 gi|91773072|ref|YP_565764.1| - 8.9 7.0 11.7 2.4 8.9 3.2 3.0 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term HTH_24 PF13412.6 gi|91773073|ref|YP_565765.1| - 0.00017 21.1 0.2 0.00033 20.1 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|91773073|ref|YP_565765.1| - 0.0024 17.7 0.0 0.0042 16.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|91773073|ref|YP_565765.1| - 0.027 15.0 0.0 0.051 14.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR PF01047.22 gi|91773073|ref|YP_565765.1| - 0.029 14.3 0.0 0.057 13.3 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_micro PF17007.5 gi|91773073|ref|YP_565765.1| - 0.033 13.0 0.0 0.043 12.6 0.0 1.2 1 0 0 1 1 1 0 HTH-like DUF4293 PF14126.6 gi|91773073|ref|YP_565765.1| - 0.043 14.1 0.5 1 9.6 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4293) HTH_Crp_2 PF13545.6 gi|91773073|ref|YP_565765.1| - 0.06 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain CarbopepD_reg_2 PF13715.6 gi|91773073|ref|YP_565765.1| - 0.075 13.1 0.0 0.2 11.7 0.0 1.7 1 1 0 1 1 1 0 CarboxypepD_reg-like domain Ac76 PF05814.11 gi|91773073|ref|YP_565765.1| - 0.12 12.4 0.1 0.12 12.4 0.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) DUF2304 PF10066.9 gi|91773073|ref|YP_565765.1| - 1.8 8.8 4.8 3 8.1 1.3 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) PapJ PF14855.6 gi|91773074|ref|YP_565766.1| - 0.067 12.9 0.0 0.097 12.3 0.0 1.2 1 0 0 1 1 1 0 Pilus-assembly fibrillin subunit, chaperone Homoserine_dh PF00742.19 gi|91773075|ref|YP_565767.1| - 2.5e-57 193.6 0.3 3.8e-57 193.0 0.3 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|91773075|ref|YP_565767.1| - 7.5e-11 42.7 0.2 2e-10 41.3 0.2 1.8 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|91773075|ref|YP_565767.1| - 0.00028 20.7 0.2 0.00056 19.7 0.2 1.6 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|91773075|ref|YP_565767.1| - 0.00065 20.0 0.2 0.0017 18.6 0.2 1.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|91773075|ref|YP_565767.1| - 0.047 13.6 0.1 0.093 12.6 0.1 1.5 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DNA_ligase_A_M PF01068.21 gi|91773076|ref|YP_565768.1| - 6.4e-56 189.2 0.0 1.1e-55 188.4 0.0 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|91773076|ref|YP_565768.1| - 3.6e-34 118.6 0.1 8.1e-34 117.4 0.1 1.6 1 1 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|91773076|ref|YP_565768.1| - 9.1e-18 64.7 0.0 3e-17 63.0 0.0 1.9 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region S-layer PF07752.11 gi|91773077|ref|YP_565769.1| - 5.2e-66 222.3 11.3 6.9e-66 221.9 11.3 1.1 1 0 0 1 1 1 1 S-layer protein S_layer_N PF05123.12 gi|91773077|ref|YP_565769.1| - 0.00011 22.2 0.1 0.00011 22.2 0.1 1.8 2 0 0 2 2 2 1 S-layer like family, N-terminal region Auxin_resp PF06507.13 gi|91773077|ref|YP_565769.1| - 0.15 12.4 0.1 0.42 10.9 0.1 1.8 1 0 0 1 1 1 0 Auxin response factor Methyltransf_25 PF13649.6 gi|91773078|ref|YP_565770.1| - 4.2e-11 43.4 0.0 1e-10 42.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91773078|ref|YP_565770.1| - 9.8e-10 38.5 0.0 1.7e-09 37.7 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91773078|ref|YP_565770.1| - 2.5e-08 34.6 0.0 5.7e-08 33.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|91773078|ref|YP_565770.1| - 3.3e-07 29.7 0.0 4.7e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|91773078|ref|YP_565770.1| - 6.2e-07 30.0 0.0 2e-06 28.4 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91773078|ref|YP_565770.1| - 1.9e-06 27.7 0.0 3.2e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|91773078|ref|YP_565770.1| - 3.2e-06 26.6 0.0 4.8e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G CMAS PF02353.20 gi|91773078|ref|YP_565770.1| - 2.4e-05 23.8 0.0 3.6e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PCMT PF01135.19 gi|91773078|ref|YP_565770.1| - 2.8e-05 24.0 0.0 4e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|91773078|ref|YP_565770.1| - 3e-05 23.5 0.0 3.9e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|91773078|ref|YP_565770.1| - 0.00022 20.8 0.0 0.00039 20.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 gi|91773078|ref|YP_565770.1| - 0.00064 19.4 0.0 0.00096 18.8 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_16 PF10294.9 gi|91773078|ref|YP_565770.1| - 0.00076 19.3 0.0 0.0013 18.5 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_18 PF12847.7 gi|91773078|ref|YP_565770.1| - 0.00086 19.3 0.0 0.0014 18.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|91773078|ref|YP_565770.1| - 0.0045 16.8 0.0 0.0096 15.7 0.0 1.5 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_15 PF09445.10 gi|91773078|ref|YP_565770.1| - 0.0052 16.4 0.0 0.0087 15.6 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase DREV PF05219.12 gi|91773078|ref|YP_565770.1| - 0.0062 15.7 0.0 0.01 14.9 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase DUF938 PF06080.12 gi|91773078|ref|YP_565770.1| - 0.0065 16.2 0.0 0.0093 15.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF938) PrmA PF06325.13 gi|91773078|ref|YP_565770.1| - 0.009 15.4 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 gi|91773078|ref|YP_565770.1| - 0.018 14.4 0.0 0.031 13.7 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltr_RsmB-F PF01189.17 gi|91773078|ref|YP_565770.1| - 0.03 14.0 0.0 0.054 13.1 0.0 1.4 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F tRNA_U5-meth_tr PF05958.11 gi|91773078|ref|YP_565770.1| - 0.037 13.0 0.0 0.059 12.4 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_4 PF02390.17 gi|91773078|ref|YP_565770.1| - 0.048 13.1 0.0 0.094 12.2 0.0 1.4 1 0 0 1 1 1 0 Putative methyltransferase Fibrillarin PF01269.17 gi|91773078|ref|YP_565770.1| - 0.073 12.2 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Fibrillarin MetW PF07021.12 gi|91773078|ref|YP_565770.1| - 0.078 12.6 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW GCD14 PF08704.10 gi|91773078|ref|YP_565770.1| - 0.12 12.1 0.0 0.56 9.8 0.0 2.0 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit CbiA PF01656.23 gi|91773079|ref|YP_565771.1| - 5.2e-10 39.5 0.0 7.7e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|91773079|ref|YP_565771.1| - 1.6e-07 31.0 0.0 7.8e-06 25.5 0.0 2.2 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 gi|91773079|ref|YP_565771.1| - 1.7e-06 27.7 0.0 0.00065 19.3 0.0 2.1 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ AAA_31 PF13614.6 gi|91773079|ref|YP_565771.1| - 8.9e-06 25.7 0.1 1.4e-05 25.1 0.1 1.5 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 gi|91773079|ref|YP_565771.1| - 0.00012 21.3 0.2 0.00021 20.6 0.2 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase APS_kinase PF01583.20 gi|91773079|ref|YP_565771.1| - 0.0002 21.3 0.1 0.0003 20.7 0.1 1.2 1 0 0 1 1 1 1 Adenylylsulphate kinase MipZ PF09140.11 gi|91773079|ref|YP_565771.1| - 0.00029 20.2 0.0 0.0023 17.3 0.1 2.2 3 0 0 3 3 3 1 ATPase MipZ DUF87 PF01935.17 gi|91773079|ref|YP_565771.1| - 0.00035 20.7 0.1 0.00057 20.0 0.1 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain Zeta_toxin PF06414.12 gi|91773079|ref|YP_565771.1| - 0.001 18.4 0.0 0.002 17.5 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin SRP54 PF00448.22 gi|91773079|ref|YP_565771.1| - 0.0013 18.4 0.0 0.044 13.4 0.1 2.1 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Fer4_NifH PF00142.18 gi|91773079|ref|YP_565771.1| - 0.0017 17.9 0.1 0.0039 16.7 0.1 1.7 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_16 PF13191.6 gi|91773079|ref|YP_565771.1| - 0.0025 18.2 0.0 0.0081 16.6 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain KTI12 PF08433.10 gi|91773079|ref|YP_565771.1| - 0.0036 16.8 0.0 0.0062 16.0 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 TrkA_N PF02254.18 gi|91773079|ref|YP_565771.1| - 0.0042 17.3 0.0 1 9.6 0.0 2.3 2 0 0 2 2 2 1 TrkA-N domain ABC_tran PF00005.27 gi|91773079|ref|YP_565771.1| - 0.013 16.0 0.1 0.022 15.3 0.1 1.4 1 0 0 1 1 1 0 ABC transporter AAA_25 PF13481.6 gi|91773079|ref|YP_565771.1| - 0.024 14.2 0.0 0.05 13.2 0.0 1.5 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|91773079|ref|YP_565771.1| - 0.034 14.2 0.1 4.4 7.4 0.0 2.3 2 0 0 2 2 2 0 50S ribosome-binding GTPase CLP1_P PF16575.5 gi|91773079|ref|YP_565771.1| - 0.042 13.6 0.1 0.089 12.6 0.0 1.5 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Gtr1_RagA PF04670.12 gi|91773079|ref|YP_565771.1| - 0.05 12.9 0.1 0.073 12.4 0.1 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region MobB PF03205.14 gi|91773079|ref|YP_565771.1| - 0.051 13.5 0.0 0.096 12.6 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Thymidylate_kin PF02223.17 gi|91773079|ref|YP_565771.1| - 0.062 13.0 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 Thymidylate kinase NTPase_1 PF03266.15 gi|91773079|ref|YP_565771.1| - 0.063 13.2 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 NTPase AAA_29 PF13555.6 gi|91773079|ref|YP_565771.1| - 0.064 13.0 1.4 0.11 12.2 1.4 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|91773079|ref|YP_565771.1| - 0.066 13.8 0.1 0.12 12.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|91773079|ref|YP_565771.1| - 0.067 12.2 0.0 0.11 11.4 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_33 PF13671.6 gi|91773079|ref|YP_565771.1| - 0.079 13.1 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.7 gi|91773079|ref|YP_565771.1| - 0.089 11.7 0.0 0.34 9.8 0.0 1.9 3 0 0 3 3 3 0 AAA-like domain ATP_bind_1 PF03029.17 gi|91773079|ref|YP_565771.1| - 0.11 12.2 0.2 0.21 11.3 0.0 1.5 2 0 0 2 2 1 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 gi|91773079|ref|YP_565771.1| - 0.11 12.1 0.0 0.41 10.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|91773079|ref|YP_565771.1| - 0.12 12.0 0.2 0.79 9.3 0.1 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_5 PF07728.14 gi|91773079|ref|YP_565771.1| - 0.17 11.9 0.0 0.47 10.4 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) LpxK PF02606.14 gi|91773079|ref|YP_565771.1| - 0.18 10.9 0.0 0.44 9.6 0.0 1.5 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase Peripla_BP_2 PF01497.18 gi|91773081|ref|YP_565773.1| - 7.5e-52 176.3 0.1 1.1e-51 175.8 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Acid_PPase PF12689.7 gi|91773081|ref|YP_565773.1| - 0.00017 21.5 0.0 0.00031 20.6 0.0 1.4 1 0 0 1 1 1 1 Acid Phosphatase FecCD PF01032.18 gi|91773082|ref|YP_565774.1| - 1.5e-92 309.9 33.9 1.8e-92 309.7 33.9 1.0 1 0 0 1 1 1 1 FecCD transport family DUF334 PF03904.13 gi|91773082|ref|YP_565774.1| - 0.17 11.4 0.0 0.37 10.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF334) ABC_tran PF00005.27 gi|91773083|ref|YP_565775.1| - 2.1e-31 109.2 0.0 3.4e-31 108.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773083|ref|YP_565775.1| - 2.3e-07 30.9 0.2 0.0061 16.4 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|91773083|ref|YP_565775.1| - 1.5e-05 24.7 0.0 2.9e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|91773083|ref|YP_565775.1| - 2.2e-05 25.0 0.0 2.7e-05 24.8 0.0 1.3 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|91773083|ref|YP_565775.1| - 4.6e-05 23.0 2.4 0.0015 18.0 2.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|91773083|ref|YP_565775.1| - 0.00073 19.4 0.5 0.0024 17.6 0.1 1.7 1 1 0 2 2 2 1 AAA ATPase domain Rad17 PF03215.15 gi|91773083|ref|YP_565775.1| - 0.0023 17.9 0.0 0.013 15.4 0.0 2.0 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_27 PF13514.6 gi|91773083|ref|YP_565775.1| - 0.0032 17.1 0.0 0.006 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 gi|91773083|ref|YP_565775.1| - 0.0034 16.3 1.6 1.4 7.6 1.1 2.9 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_22 PF13401.6 gi|91773083|ref|YP_565775.1| - 0.0039 17.5 0.3 0.061 13.6 0.3 2.1 1 1 0 1 1 1 1 AAA domain HSM3_N PF18795.1 gi|91773083|ref|YP_565775.1| - 0.0054 16.2 0.1 0.01 15.3 0.1 1.4 1 0 0 1 1 1 1 DNA mismatch repair protein HSM3, N terminal domain AAA_16 PF13191.6 gi|91773083|ref|YP_565775.1| - 0.0096 16.3 0.0 0.022 15.1 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain NB-ARC PF00931.22 gi|91773083|ref|YP_565775.1| - 0.0099 15.1 1.4 0.031 13.5 1.4 1.7 1 1 0 1 1 1 1 NB-ARC domain Mg_chelatase PF01078.21 gi|91773083|ref|YP_565775.1| - 0.02 14.3 0.0 0.055 12.8 0.0 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 gi|91773083|ref|YP_565775.1| - 0.03 14.0 0.0 0.073 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain MukB PF04310.12 gi|91773083|ref|YP_565775.1| - 0.034 14.0 0.0 0.062 13.1 0.0 1.4 1 0 0 1 1 1 0 MukB N-terminal B5 PF03484.15 gi|91773083|ref|YP_565775.1| - 0.035 14.4 0.0 0.076 13.3 0.0 1.5 1 0 0 1 1 1 0 tRNA synthetase B5 domain RRF PF01765.19 gi|91773083|ref|YP_565775.1| - 0.054 13.5 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Ribosome recycling factor NTPase_1 PF03266.15 gi|91773083|ref|YP_565775.1| - 0.12 12.2 0.1 1.7 8.5 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_33 PF13671.6 gi|91773083|ref|YP_565775.1| - 0.14 12.3 0.0 1.2 9.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|91773083|ref|YP_565775.1| - 0.14 11.8 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain Phage_ABA_S PF18066.1 gi|91773083|ref|YP_565775.1| - 0.15 12.8 0.1 1.8 9.3 0.0 2.2 2 0 0 2 2 2 0 Phage ABA sandwich domain HMG-CoA_red PF00368.18 gi|91773084|ref|YP_565776.1| - 2.2e-134 448.1 9.1 2.6e-134 447.9 9.1 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase PALP PF00291.25 gi|91773086|ref|YP_565778.1| - 8.2e-40 137.0 0.0 9.6e-40 136.8 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HhH-GPD PF00730.25 gi|91773087|ref|YP_565779.1| - 7.4e-24 84.3 0.0 1e-23 83.8 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|91773087|ref|YP_565779.1| - 7.3e-11 41.4 0.0 3.2e-10 39.3 0.0 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|91773087|ref|YP_565779.1| - 0.0001 22.5 4.6 0.00016 21.9 4.6 1.3 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|91773087|ref|YP_565779.1| - 0.00024 21.7 0.0 0.044 14.4 0.0 2.5 1 1 1 2 2 2 1 Helix-hairpin-helix domain DUF2400 PF09674.10 gi|91773087|ref|YP_565779.1| - 0.035 14.1 0.0 0.29 11.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) HHH_2 PF12826.7 gi|91773087|ref|YP_565779.1| - 0.077 13.1 0.0 0.89 9.7 0.0 2.2 2 0 0 2 2 2 0 Helix-hairpin-helix motif DEAD PF00270.29 gi|91773088|ref|YP_565780.1| - 6.2e-26 91.2 0.1 4e-25 88.6 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|91773088|ref|YP_565780.1| - 7.2e-10 39.1 0.0 1e-08 35.4 0.0 2.4 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|91773088|ref|YP_565780.1| - 1.2e-09 38.5 0.0 8.3e-08 32.6 0.1 3.0 2 1 0 2 2 2 1 Helicase conserved C-terminal domain HHH_5 PF14520.6 gi|91773088|ref|YP_565780.1| - 2.6e-08 34.3 0.1 9.3e-08 32.6 0.1 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|91773088|ref|YP_565780.1| - 0.00016 21.5 0.0 0.00043 20.1 0.0 1.7 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH_2 PF12826.7 gi|91773088|ref|YP_565780.1| - 0.0007 19.6 0.3 0.0031 17.6 0.1 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH PF00633.23 gi|91773088|ref|YP_565780.1| - 0.06 13.2 0.0 11 6.1 0.0 3.0 2 0 0 2 2 2 0 Helix-hairpin-helix motif Histidinol_dh PF00815.20 gi|91773089|ref|YP_565781.1| - 2.7e-169 563.5 6.8 3.2e-169 563.3 6.8 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase DUF1699 PF08004.11 gi|91773090|ref|YP_565782.1| - 1.2e-59 199.6 2.0 1.3e-59 199.5 2.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Rad33 PF08730.10 gi|91773090|ref|YP_565782.1| - 0.016 15.2 0.3 0.019 15.0 0.3 1.1 1 0 0 1 1 1 0 Rad33 TP_methylase PF00590.20 gi|91773091|ref|YP_565783.1| - 9e-55 185.9 0.6 1e-54 185.7 0.6 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|91773091|ref|YP_565783.1| - 0.041 14.3 0.3 0.22 11.9 0.3 2.1 1 1 0 1 1 1 0 Radical SAM superfamily HEM4 PF02602.15 gi|91773092|ref|YP_565784.1| - 8.2e-40 136.6 0.0 9.9e-40 136.3 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD DUF3916 PF13079.6 gi|91773092|ref|YP_565784.1| - 0.04 13.8 0.0 0.2 11.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3916) PMT_2 PF13231.6 gi|91773093|ref|YP_565785.1| - 0.0024 18.1 2.0 0.0024 18.1 2.0 1.9 1 1 1 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase ODV-E18 PF10717.9 gi|91773093|ref|YP_565785.1| - 0.2 11.6 0.1 0.2 11.6 0.1 3.1 2 1 1 3 3 3 0 Occlusion-derived virus envelope protein ODV-E18 DUF4281 PF14108.6 gi|91773093|ref|YP_565785.1| - 0.21 12.0 2.7 1.7 9.0 0.4 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4281) Tmemb_9 PF05434.11 gi|91773093|ref|YP_565785.1| - 9 6.2 7.0 22 4.9 0.9 2.4 2 1 0 2 2 2 0 TMEM9 Lactonase PF10282.9 gi|91773096|ref|YP_565788.1| - 6.9e-14 51.9 7.0 0.00017 21.0 0.2 3.6 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|91773096|ref|YP_565788.1| - 2.7e-09 36.0 9.1 2.6e-05 23.0 0.8 3.5 1 1 3 4 4 4 4 Cytochrome D1 heme domain SGL PF08450.12 gi|91773096|ref|YP_565788.1| - 5e-07 29.5 13.6 0.014 15.0 1.5 3.3 1 1 1 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|91773096|ref|YP_565788.1| - 3.1e-06 26.9 12.9 0.36 10.9 0.3 6.1 7 0 0 7 7 7 4 NHL repeat PD40 PF07676.12 gi|91773096|ref|YP_565788.1| - 2.3e-05 24.2 0.0 2 8.4 0.0 4.6 5 0 0 5 5 5 2 WD40-like Beta Propeller Repeat DUF1513 PF07433.11 gi|91773096|ref|YP_565788.1| - 0.017 14.2 1.8 9 5.3 0.1 3.6 1 1 1 4 4 4 0 Protein of unknown function (DUF1513) P_proprotein PF01483.20 gi|91773096|ref|YP_565788.1| - 0.022 14.8 0.1 1.9 8.6 0.0 4.0 4 2 2 6 6 6 0 Proprotein convertase P-domain DUF4245 PF14030.6 gi|91773096|ref|YP_565788.1| - 0.18 11.8 5.8 3.1 7.8 0.2 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF4245) Peptidase_C39_2 PF13529.6 gi|91773097|ref|YP_565789.1| - 3.7e-09 37.3 3.1 1e-08 35.8 1.0 2.7 2 1 0 2 2 2 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|91773097|ref|YP_565789.1| - 0.00094 19.2 0.0 0.0021 18.1 0.0 1.6 1 0 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 MutL PF13941.6 gi|91773097|ref|YP_565789.1| - 0.16 10.5 0.1 0.23 10.0 0.1 1.1 1 0 0 1 1 1 0 MutL protein DUF1724 PF08350.10 gi|91773098|ref|YP_565790.1| - 1e-21 76.8 0.3 5.4e-21 74.5 0.0 2.3 3 0 0 3 3 3 1 Domain of unknown function (DUF1724) HemN_C PF06969.16 gi|91773098|ref|YP_565790.1| - 0.059 13.4 0.0 0.25 11.4 0.0 2.1 2 0 0 2 2 2 0 HemN C-terminal domain HxlR PF01638.17 gi|91773098|ref|YP_565790.1| - 0.11 12.4 0.1 0.27 11.1 0.1 1.6 1 1 0 1 1 1 0 HxlR-like helix-turn-helix XhlA PF10779.9 gi|91773100|ref|YP_565792.1| - 0.13 12.4 0.6 0.25 11.6 0.6 1.4 1 0 0 1 1 1 0 Haemolysin XhlA DDE_Tnp_IS66 PF03050.14 gi|91773101|ref|YP_565793.1| - 1.9e-67 227.7 0.4 6.3e-67 226.0 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91773101|ref|YP_565793.1| - 9e-11 42.0 3.8 2.7e-10 40.5 3.8 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 SlyX PF04102.12 gi|91773101|ref|YP_565793.1| - 5.2e-05 23.8 0.7 0.00014 22.4 0.7 1.7 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91773101|ref|YP_565793.1| - 0.00011 22.5 0.3 0.17 12.1 0.2 2.8 3 0 0 3 3 3 2 DDE domain BST2 PF16716.5 gi|91773101|ref|YP_565793.1| - 0.067 13.8 1.4 0.3 11.7 1.4 2.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Zn_Tnp_IS1595 PF12760.7 gi|91773101|ref|YP_565793.1| - 0.14 12.2 2.7 0.83 9.7 0.8 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF16 PF01519.16 gi|91773101|ref|YP_565793.1| - 0.14 12.7 2.6 0.55 10.7 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF16 Lar_restr_allev PF14354.6 gi|91773101|ref|YP_565793.1| - 0.36 11.2 6.9 0.52 10.7 4.5 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91773101|ref|YP_565793.1| - 1 10.1 8.9 7.1 7.4 1.5 3.6 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PLATZ PF04640.14 gi|91773101|ref|YP_565793.1| - 2.1 9.0 6.0 0.65 10.7 1.1 2.7 2 1 0 2 2 2 0 PLATZ transcription factor Peptidase_C39_2 PF13529.6 gi|91773102|ref|YP_565794.1| - 4.9e-13 49.8 0.1 1.2e-12 48.6 0.1 1.7 1 0 0 1 1 1 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|91773102|ref|YP_565794.1| - 2.3e-05 24.4 0.0 5e-05 23.3 0.0 1.5 1 1 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 CMD PF02627.20 gi|91773103|ref|YP_565795.1| - 1.7e-08 34.4 0.0 2.2e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family DUF1137 PF06587.11 gi|91773103|ref|YP_565795.1| - 0.014 15.4 0.0 0.021 14.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1137) Ferritin PF00210.24 gi|91773104|ref|YP_565796.1| - 2e-41 141.2 4.4 2.3e-41 141.0 4.4 1.0 1 0 0 1 1 1 1 Ferritin-like domain ANAPC5 PF12862.7 gi|91773104|ref|YP_565796.1| - 0.038 14.1 0.1 0.065 13.3 0.1 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 5 Cas_Cas6 PF01881.16 gi|91773105|ref|YP_565797.1| - 1.3e-37 129.6 0.5 4.1e-37 128.0 0.6 1.7 2 0 0 2 2 2 1 CRISPR associated protein Cas6 DUF592 PF04574.13 gi|91773106|ref|YP_565798.1| - 0.0043 16.8 0.2 0.011 15.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF592) Cas_Cas7 PF05107.12 gi|91773107|ref|YP_565799.1| - 1.8e-34 119.4 2.2 2.1e-34 119.2 2.2 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Cas7 Cas_Cas5d PF09704.10 gi|91773108|ref|YP_565800.1| - 1.2e-07 31.8 0.0 1.5e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) TPK_B1_binding PF04265.14 gi|91773108|ref|YP_565800.1| - 0.03 14.0 0.0 0.13 12.0 0.0 2.1 2 0 0 2 2 2 0 Thiamin pyrophosphokinase, vitamin B1 binding domain DEAD PF00270.29 gi|91773109|ref|YP_565801.1| - 1.7e-09 37.7 0.0 1.5e-08 34.6 0.0 2.5 2 1 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|91773109|ref|YP_565801.1| - 2.5e-09 37.4 3.8 9.2e-09 35.5 0.1 3.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|91773109|ref|YP_565801.1| - 2.7e-06 27.7 0.8 2.7e-06 27.7 0.8 3.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain HD_6 PF18019.1 gi|91773109|ref|YP_565801.1| - 0.00015 22.0 0.0 0.00023 21.3 0.0 1.2 1 0 0 1 1 1 1 HD domain HD PF01966.22 gi|91773109|ref|YP_565801.1| - 0.00035 20.8 0.1 0.0013 18.9 0.0 2.0 2 0 0 2 2 2 1 HD domain PhoH PF02562.16 gi|91773109|ref|YP_565801.1| - 0.009 15.5 0.0 0.65 9.4 0.0 2.3 2 0 0 2 2 2 1 PhoH-like protein Cas_Cas4 PF01930.17 gi|91773110|ref|YP_565802.1| - 1.5e-54 184.5 3.9 1.7e-54 184.3 3.9 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|91773110|ref|YP_565802.1| - 0.043 13.7 0.1 0.05 13.5 0.1 1.2 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Cas_Cas1 PF01867.16 gi|91773111|ref|YP_565803.1| - 1.6e-85 286.7 0.1 1.9e-85 286.5 0.1 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 CRISPR_Cas2 PF09827.9 gi|91773112|ref|YP_565804.1| - 8.8e-21 73.9 3.0 1.1e-20 73.6 3.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas2 IZUMO PF15005.6 gi|91773112|ref|YP_565804.1| - 0.14 12.7 0.1 0.17 12.4 0.1 1.1 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated tRNA_NucTransf2 PF09249.11 gi|91773113|ref|YP_565805.1| - 2.4e-45 153.4 0.0 4.9e-45 152.4 0.0 1.6 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|91773113|ref|YP_565805.1| - 6.1e-13 48.9 0.0 1.6e-12 47.6 0.0 1.8 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|91773113|ref|YP_565805.1| - 7.3e-05 23.0 0.0 0.00016 21.9 0.0 1.5 1 0 0 1 1 1 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain OGG_N PF07934.12 gi|91773114|ref|YP_565806.1| - 1.8e-21 76.4 0.1 3.3e-20 72.4 0.2 2.4 2 1 0 2 2 2 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.25 gi|91773114|ref|YP_565806.1| - 2.3e-07 31.2 0.0 3.4e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|91773114|ref|YP_565806.1| - 1.7e-05 24.5 0.0 4.5e-05 23.1 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|91773114|ref|YP_565806.1| - 0.045 14.4 0.2 0.17 12.5 0.1 2.0 1 1 1 2 2 2 0 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|91773114|ref|YP_565806.1| - 0.053 13.6 0.0 1 9.5 0.0 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix motif DUF3669 PF12417.8 gi|91773114|ref|YP_565806.1| - 0.062 13.5 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 Zinc finger protein POR PF01558.18 gi|91773115|ref|YP_565807.1| - 1.2e-36 126.4 0.5 1.4e-36 126.2 0.5 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|91773116|ref|YP_565808.1| - 1.8e-27 96.0 0.3 4.2e-27 94.8 0.3 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|91773116|ref|YP_565808.1| - 3.5e-13 49.8 0.0 5.9e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|91773116|ref|YP_565808.1| - 2.2e-09 36.7 12.5 1.5e-05 24.6 3.3 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91773116|ref|YP_565808.1| - 5.7e-07 29.6 11.3 5.7e-07 29.6 11.3 2.5 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91773116|ref|YP_565808.1| - 1e-05 25.6 12.6 1.4e-05 25.1 11.4 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773116|ref|YP_565808.1| - 1.8e-05 24.5 16.5 0.0034 17.4 2.7 3.9 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91773116|ref|YP_565808.1| - 2.5e-05 24.3 11.0 6.8e-05 22.9 11.0 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773116|ref|YP_565808.1| - 0.00024 21.0 18.9 0.014 15.4 3.2 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91773116|ref|YP_565808.1| - 0.0014 19.2 12.7 0.0014 19.2 12.7 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain TPP_enzyme_N PF02776.18 gi|91773116|ref|YP_565808.1| - 0.0042 16.7 0.1 0.072 12.7 0.0 2.6 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_15 PF13459.6 gi|91773116|ref|YP_565808.1| - 0.042 14.6 1.4 0.042 14.6 1.4 4.0 4 1 1 5 5 3 0 4Fe-4S single cluster domain PFOR_II PF17147.4 gi|91773116|ref|YP_565808.1| - 0.1 12.9 0.1 0.26 11.6 0.1 1.7 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II Fer4_17 PF13534.6 gi|91773116|ref|YP_565808.1| - 0.11 13.1 10.9 77 3.9 11.0 2.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain WHIM1 PF15612.6 gi|91773116|ref|YP_565808.1| - 0.14 11.7 0.0 0.62 9.7 0.0 2.1 2 0 0 2 2 2 0 WSTF, HB1, Itc1p, MBD9 motif 1 Fer4_16 PF13484.6 gi|91773116|ref|YP_565808.1| - 0.16 13.0 12.0 0.23 12.4 2.4 2.6 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|91773116|ref|YP_565808.1| - 0.21 12.1 14.2 0.56 10.8 2.1 3.5 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|91773116|ref|YP_565808.1| - 2.3 9.3 15.2 0.13 13.2 4.0 3.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91773116|ref|YP_565808.1| - 5.9 7.4 14.7 1.7e+03 -0.4 14.7 2.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91773116|ref|YP_565808.1| - 6.1 7.6 20.7 2 9.2 3.5 2.9 2 1 0 3 3 2 0 4Fe-4S binding domain Hydantoinase_A PF01968.18 gi|91773117|ref|YP_565809.1| - 8.2e-34 117.2 7.3 1.2e-33 116.6 2.5 2.9 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|91773117|ref|YP_565809.1| - 3.4e-30 105.0 4.1 2.8e-27 95.6 0.2 3.2 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|91773117|ref|YP_565809.1| - 7e-09 34.8 1.3 0.00046 18.9 0.3 2.3 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|91773117|ref|YP_565809.1| - 0.00021 20.9 1.4 0.13 11.7 0.0 3.5 4 0 0 4 4 4 2 BadF/BadG/BcrA/BcrD ATPase family StbA PF06406.11 gi|91773117|ref|YP_565809.1| - 0.013 14.7 0.1 0.033 13.4 0.1 1.6 1 0 0 1 1 1 0 StbA protein ROK PF00480.20 gi|91773117|ref|YP_565809.1| - 0.018 14.5 0.3 0.036 13.5 0.0 1.7 2 0 0 2 2 2 0 ROK family LisH PF08513.11 gi|91773117|ref|YP_565809.1| - 0.53 10.3 2.1 1.2 9.2 0.3 2.2 2 0 0 2 2 2 0 LisH Pyridox_ox_2 PF12900.7 gi|91773118|ref|YP_565810.1| - 3.9e-24 85.2 0.0 4.3e-24 85.1 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|91773118|ref|YP_565810.1| - 7.2e-05 22.9 0.0 0.0001 22.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|91773118|ref|YP_565810.1| - 0.11 12.1 0.1 0.45 10.1 0.1 1.8 1 1 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase like FMN_bind_2 PF04299.12 gi|91773118|ref|YP_565810.1| - 0.17 11.6 0.0 0.55 9.9 0.0 1.8 1 1 0 1 1 1 0 Putative FMN-binding domain AMP-binding PF00501.28 gi|91773120|ref|YP_565812.1| - 7.1e-95 318.1 0.1 8.5e-95 317.8 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|91773120|ref|YP_565812.1| - 7.1e-26 91.0 0.1 1.8e-25 89.7 0.0 1.7 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|91773120|ref|YP_565812.1| - 3.7e-19 68.4 7.1 8.7e-19 67.2 7.1 1.7 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus ArsR PF09824.9 gi|91773122|ref|YP_565814.1| - 0.081 12.5 1.2 0.25 10.9 1.2 1.9 1 1 0 1 1 1 0 ArsR transcriptional regulator Rho_RNA_bind PF07497.12 gi|91773122|ref|YP_565814.1| - 0.15 11.9 0.1 0.34 10.8 0.0 1.6 2 0 0 2 2 2 0 Rho termination factor, RNA-binding domain MarR_2 PF12802.7 gi|91773123|ref|YP_565815.1| - 0.00021 21.1 0.0 0.00027 20.7 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_36 PF13730.6 gi|91773123|ref|YP_565815.1| - 0.0008 19.3 0.0 0.0015 18.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 gi|91773123|ref|YP_565815.1| - 0.0013 18.6 0.1 0.0021 17.9 0.1 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|91773123|ref|YP_565815.1| - 0.0022 17.9 0.0 0.0031 17.4 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 gi|91773123|ref|YP_565815.1| - 0.0052 16.9 0.0 0.0087 16.2 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.10 gi|91773123|ref|YP_565815.1| - 0.015 15.1 0.0 0.019 14.7 0.0 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain Rio2_N PF09202.11 gi|91773123|ref|YP_565815.1| - 0.016 15.4 0.0 0.027 14.7 0.0 1.4 1 0 0 1 1 1 0 Rio2, N-terminal SieB PF14163.6 gi|91773123|ref|YP_565815.1| - 0.034 13.6 0.7 0.41 10.1 0.7 2.1 1 1 0 1 1 1 0 Super-infection exclusion protein B HTH_24 PF13412.6 gi|91773123|ref|YP_565815.1| - 0.051 13.1 0.0 0.13 11.9 0.0 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding Fer4_5 PF12801.7 gi|91773124|ref|YP_565816.1| - 1.3e-14 53.8 12.9 9.1e-12 44.7 1.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91773124|ref|YP_565816.1| - 1.9e-09 37.5 13.1 1.1e-06 28.7 2.7 2.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91773124|ref|YP_565816.1| - 5.1e-09 35.6 23.4 3.6e-06 26.6 3.2 3.7 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773124|ref|YP_565816.1| - 9.6e-09 35.3 17.9 2.1e-05 24.6 4.7 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91773124|ref|YP_565816.1| - 4.3e-08 33.3 11.0 4.3e-08 33.3 11.0 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773124|ref|YP_565816.1| - 5.3e-08 33.3 16.2 0.0013 19.2 1.4 3.2 3 2 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773124|ref|YP_565816.1| - 1.8e-07 30.9 19.2 0.00033 20.6 2.3 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91773124|ref|YP_565816.1| - 7e-06 26.5 13.9 0.00064 20.2 3.1 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91773124|ref|YP_565816.1| - 0.00015 21.8 21.4 0.00051 20.1 16.0 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773124|ref|YP_565816.1| - 0.00026 20.9 11.5 0.004 17.2 1.1 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91773124|ref|YP_565816.1| - 0.00078 20.3 20.1 0.00083 20.2 1.9 3.0 3 1 1 4 4 3 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|91773124|ref|YP_565816.1| - 0.0023 18.3 25.9 0.011 16.2 3.4 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|91773124|ref|YP_565816.1| - 0.0032 18.3 3.0 0.0032 18.3 3.0 4.0 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|91773124|ref|YP_565816.1| - 0.0073 17.1 11.0 0.14 13.0 1.3 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91773124|ref|YP_565816.1| - 0.027 14.9 18.6 0.2 12.1 2.1 2.8 3 1 0 3 3 3 0 4Fe-4S dicluster domain Saf_2TM PF18303.1 gi|91773124|ref|YP_565816.1| - 3.9 7.0 6.2 0.35 10.5 1.3 1.7 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain Fer4_13 PF13370.6 gi|91773124|ref|YP_565816.1| - 5.2 7.7 21.8 0.51 10.9 2.8 3.1 3 1 1 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I FAD_binding_4 PF01565.23 gi|91773125|ref|YP_565817.1| - 1.6e-36 125.1 0.0 3.7e-36 123.9 0.0 1.7 1 0 0 1 1 1 1 FAD binding domain CCG PF02754.16 gi|91773125|ref|YP_565817.1| - 4.3e-34 116.6 3.6 2.9e-16 59.4 0.7 2.8 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_17 PF13534.6 gi|91773125|ref|YP_565817.1| - 4.5e-09 36.7 6.1 4.5e-09 36.7 6.1 2.4 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91773125|ref|YP_565817.1| - 7.5e-05 22.8 4.3 8.8e-05 22.6 2.2 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91773125|ref|YP_565817.1| - 9.9e-05 22.7 6.7 9.9e-05 22.7 6.7 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773125|ref|YP_565817.1| - 0.0023 18.5 6.5 0.0074 16.9 6.5 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain FAD-oxidase_C PF02913.19 gi|91773125|ref|YP_565817.1| - 0.0031 17.2 0.0 0.0072 16.0 0.0 1.7 1 1 0 1 1 1 1 FAD linked oxidases, C-terminal domain NTP_transf_7 PF07984.12 gi|91773125|ref|YP_565817.1| - 0.2 10.8 0.0 0.38 9.9 0.0 1.3 1 0 0 1 1 1 0 Nucleotidyltransferase OrfB_Zn_ribbon PF07282.11 gi|91773125|ref|YP_565817.1| - 0.59 10.1 4.3 6.1 6.8 0.8 3.9 4 0 0 4 4 4 0 Putative transposase DNA-binding domain TfoX_N PF04993.13 gi|91773126|ref|YP_565818.1| - 2e-13 50.3 0.0 2.7e-13 49.9 0.0 1.1 1 0 0 1 1 1 1 TfoX N-terminal domain YjbR PF04237.13 gi|91773126|ref|YP_565818.1| - 0.00019 21.9 0.0 0.00026 21.5 0.0 1.3 1 0 0 1 1 1 1 YjbR ABC_tran PF00005.27 gi|91773127|ref|YP_565819.1| - 1.7e-24 86.9 0.0 2.2e-24 86.5 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773127|ref|YP_565819.1| - 1.6e-07 31.4 2.4 6.8e-05 22.8 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91773127|ref|YP_565819.1| - 9.3e-07 28.5 1.4 1.3e-05 24.7 1.4 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain NB-ARC PF00931.22 gi|91773127|ref|YP_565819.1| - 0.00025 20.3 0.4 0.48 9.6 0.3 2.1 2 0 0 2 2 2 2 NB-ARC domain AAA_29 PF13555.6 gi|91773127|ref|YP_565819.1| - 0.00027 20.6 0.2 0.00053 19.7 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain DAP3 PF10236.9 gi|91773127|ref|YP_565819.1| - 0.0034 16.6 0.0 0.0043 16.3 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 G-alpha PF00503.20 gi|91773127|ref|YP_565819.1| - 0.013 14.7 0.0 0.013 14.7 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit RsgA_GTPase PF03193.16 gi|91773127|ref|YP_565819.1| - 0.018 14.9 0.1 0.036 14.0 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase T2SSE PF00437.20 gi|91773127|ref|YP_565819.1| - 0.063 12.3 0.0 0.088 11.8 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 gi|91773127|ref|YP_565819.1| - 0.066 13.6 0.1 0.078 13.4 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 gi|91773127|ref|YP_565819.1| - 0.067 13.2 0.0 1.4 8.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|91773127|ref|YP_565819.1| - 0.067 13.5 0.0 0.13 12.6 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|91773127|ref|YP_565819.1| - 0.085 12.9 0.7 5.2 7.1 0.1 2.3 1 1 1 2 2 2 0 AAA domain NACHT PF05729.12 gi|91773127|ref|YP_565819.1| - 0.11 12.4 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 NACHT domain UPF0014 PF03649.13 gi|91773128|ref|YP_565820.1| - 5.4e-74 248.6 18.3 6.1e-74 248.4 18.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) YscW PF09619.10 gi|91773129|ref|YP_565821.1| - 4.3e-05 23.8 0.0 0.00011 22.5 0.0 1.6 1 1 0 1 1 1 1 Type III secretion system lipoprotein chaperone (YscW) DprA_WH PF17782.1 gi|91773130|ref|YP_565822.1| - 0.012 15.7 0.0 0.018 15.2 0.0 1.4 1 0 0 1 1 1 0 DprA winged helix domain TrmB PF01978.19 gi|91773130|ref|YP_565822.1| - 0.016 15.1 0.2 0.035 14.0 0.1 1.6 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|91773130|ref|YP_565822.1| - 0.016 15.0 0.0 0.038 13.8 0.0 1.7 2 1 0 2 2 2 0 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|91773130|ref|YP_565822.1| - 0.02 14.8 0.1 0.077 12.9 0.1 2.0 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_9 PF08221.11 gi|91773130|ref|YP_565822.1| - 0.039 14.1 0.0 0.093 12.8 0.0 1.6 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_20 PF12840.7 gi|91773130|ref|YP_565822.1| - 0.039 14.0 0.0 0.053 13.6 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|91773130|ref|YP_565822.1| - 0.1 12.2 0.0 0.26 10.9 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Inhibitor_I42 PF09394.10 gi|91773131|ref|YP_565823.1| - 4e-20 72.0 1.1 5.8e-10 39.5 0.1 2.3 2 0 0 2 2 2 2 Chagasin family peptidase inhibitor I42 HTH_20 PF12840.7 gi|91773131|ref|YP_565823.1| - 2.8e-10 40.1 0.0 5e-10 39.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|91773131|ref|YP_565823.1| - 8.2e-07 28.5 0.6 1.4e-06 27.7 0.6 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|91773131|ref|YP_565823.1| - 9.5e-07 28.6 0.3 1.8e-06 27.7 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|91773131|ref|YP_565823.1| - 3.5e-05 23.6 0.0 8.4e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|91773131|ref|YP_565823.1| - 0.0011 18.8 2.0 0.0013 18.6 0.6 1.9 2 0 0 2 2 2 1 HTH domain TFIIE_alpha PF02002.17 gi|91773131|ref|YP_565823.1| - 0.0043 16.9 0.3 0.0094 15.8 0.3 1.5 1 0 0 1 1 1 1 TFIIE alpha subunit MarR PF01047.22 gi|91773131|ref|YP_565823.1| - 0.0044 16.9 0.2 0.0099 15.8 0.2 1.5 1 0 0 1 1 1 1 MarR family DUF742 PF05331.11 gi|91773131|ref|YP_565823.1| - 0.0062 16.3 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF742) Dimerisation2 PF16864.5 gi|91773131|ref|YP_565823.1| - 0.0083 16.1 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 1 Dimerisation domain MarR_2 PF12802.7 gi|91773131|ref|YP_565823.1| - 0.017 15.0 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_45 PF14947.6 gi|91773131|ref|YP_565823.1| - 0.033 14.2 0.2 0.086 12.8 0.2 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_27 PF13463.6 gi|91773131|ref|YP_565823.1| - 0.034 14.6 0.1 0.074 13.6 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_38 PF13936.6 gi|91773131|ref|YP_565823.1| - 0.037 13.8 0.1 0.069 12.9 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|91773131|ref|YP_565823.1| - 0.045 13.6 0.0 0.086 12.7 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|91773131|ref|YP_565823.1| - 0.091 12.6 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Cullin_Nedd8 PF10557.9 gi|91773131|ref|YP_565823.1| - 0.1 12.7 0.3 0.2 11.7 0.3 1.4 1 0 0 1 1 1 0 Cullin protein neddylation domain Radical_SAM PF04055.21 gi|91773132|ref|YP_565824.1| - 7.6e-15 55.7 0.4 8.6e-14 52.2 0.0 2.1 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|91773132|ref|YP_565824.1| - 0.0039 17.3 0.7 0.0095 16.1 0.2 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain LPD13 PF18825.1 gi|91773132|ref|YP_565824.1| - 0.0097 15.7 0.5 0.024 14.4 0.1 1.8 2 0 0 2 2 2 1 Large polyvalent protein-associated domain 13 DUF561 PF04481.12 gi|91773132|ref|YP_565824.1| - 0.0098 15.1 0.1 0.022 13.9 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF561) Fer4_12 PF13353.6 gi|91773132|ref|YP_565824.1| - 0.013 15.7 0.1 0.025 14.9 0.1 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF134 PF02001.16 gi|91773133|ref|YP_565825.1| - 1e-21 77.3 0.0 1.4e-21 76.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF134 zf-ribbon_3 PF13248.6 gi|91773133|ref|YP_565825.1| - 0.022 14.2 7.1 0.6 9.6 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Sigma70_r4_2 PF08281.12 gi|91773133|ref|YP_565825.1| - 0.024 14.3 0.1 0.036 13.8 0.1 1.2 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_29 PF13551.6 gi|91773133|ref|YP_565825.1| - 0.047 13.7 0.1 0.16 12.0 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn helix zf-NADH-PPase PF09297.11 gi|91773133|ref|YP_565825.1| - 0.086 12.5 3.5 6.6 6.5 0.1 2.6 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF45 PF01863.17 gi|91773133|ref|YP_565825.1| - 0.088 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF45 HTH_23 PF13384.6 gi|91773133|ref|YP_565825.1| - 0.19 11.6 0.0 0.36 10.7 0.0 1.4 1 1 0 1 1 1 0 Homeodomain-like domain zinc_ribbon_2 PF13240.6 gi|91773133|ref|YP_565825.1| - 0.22 11.3 8.7 1.8 8.4 1.4 2.4 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.19 gi|91773133|ref|YP_565825.1| - 0.35 10.9 6.4 1.1 9.3 3.8 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C4_Topoisom PF01396.19 gi|91773133|ref|YP_565825.1| - 0.44 10.4 8.2 0.27 11.1 0.7 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Zn_Tnp_IS91 PF14319.6 gi|91773133|ref|YP_565825.1| - 0.66 10.1 4.0 1.6 8.8 4.0 1.6 1 0 0 1 1 1 0 Transposase zinc-binding domain Zn-ribbon_8 PF09723.10 gi|91773133|ref|YP_565825.1| - 1 9.5 7.9 2.6 8.2 7.9 1.7 1 0 0 1 1 1 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|91773133|ref|YP_565825.1| - 1.8 8.6 4.8 3.9 7.5 4.8 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain TatD_DNase PF01026.21 gi|91773134|ref|YP_565826.1| - 8.9e-22 77.7 0.0 1.3e-21 77.2 0.0 1.2 1 0 0 1 1 1 1 TatD related DNase Amidohydro_1 PF01979.20 gi|91773134|ref|YP_565826.1| - 0.056 12.8 0.0 0.073 12.4 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase family PD40 PF07676.12 gi|91773135|ref|YP_565827.1| - 2.4e-26 91.1 20.5 2.9e-06 27.0 0.2 7.4 7 0 0 7 7 7 5 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 gi|91773135|ref|YP_565827.1| - 2e-09 36.7 10.7 0.056 12.2 0.4 7.1 1 1 7 9 9 9 5 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF5050 PF16472.5 gi|91773135|ref|YP_565827.1| - 3.1e-08 33.2 4.9 0.0011 18.2 0.4 4.0 2 2 2 4 4 4 3 Domain of unknown function (DUF5050) Pectate_lyase22 PF14583.6 gi|91773135|ref|YP_565827.1| - 5.5e-08 31.9 3.4 2.8e-06 26.3 3.0 3.9 1 1 0 1 1 1 1 Oligogalacturonate lyase eIF2A PF08662.11 gi|91773135|ref|YP_565827.1| - 0.00045 20.2 0.6 0.0014 18.5 0.2 2.1 2 1 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A Gmad1 PF10647.9 gi|91773135|ref|YP_565827.1| - 0.0012 18.7 0.0 0.067 12.9 0.0 2.9 1 1 2 3 3 3 1 Lipoprotein LpqB beta-propeller domain BiPBP_C PF06832.12 gi|91773135|ref|YP_565827.1| - 0.013 15.6 0.0 17 5.6 0.0 3.7 4 0 0 4 4 4 0 Penicillin-Binding Protein C-terminus Family NusG_II PF07009.11 gi|91773135|ref|YP_565827.1| - 0.027 14.7 0.5 3.5 7.9 0.2 3.1 1 1 0 3 3 3 0 NusG domain II ChitinaseA_N PF08329.10 gi|91773135|ref|YP_565827.1| - 0.029 14.0 0.3 2.6 7.7 0.0 3.3 3 0 0 3 3 3 0 Chitinase A, N-terminal domain PD40 PF07676.12 gi|91773136|ref|YP_565828.1| - 5.7e-19 67.5 8.9 2.7e-05 24.0 0.1 6.6 6 0 0 6 6 6 5 WD40-like Beta Propeller Repeat DUF5050 PF16472.5 gi|91773136|ref|YP_565828.1| - 1.3e-08 34.5 0.1 4.7e-05 22.8 0.0 3.2 2 1 1 3 3 3 2 Domain of unknown function (DUF5050) DPPIV_N PF00930.21 gi|91773136|ref|YP_565828.1| - 5.9e-07 28.6 1.0 0.92 8.2 0.0 5.3 3 1 3 6 6 6 4 Dipeptidyl peptidase IV (DPP IV) N-terminal region Inh PF02974.14 gi|91773136|ref|YP_565828.1| - 0.071 13.2 0.6 31 4.7 0.0 4.3 3 1 1 5 5 5 0 Protease inhibitor Inh DUF1611 PF07755.11 gi|91773138|ref|YP_565830.1| - 0.0021 17.3 0.0 0.0087 15.4 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1611_C) P-loop domain PG_binding_4 PF12229.8 gi|91773138|ref|YP_565830.1| - 0.06 13.6 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 Putative peptidoglycan binding domain UvrA_inter PF17760.1 gi|91773139|ref|YP_565831.1| - 3.9e-37 126.6 0.7 9.2e-37 125.5 0.7 1.7 1 0 0 1 1 1 1 UvrA interaction domain UvrA_DNA-bind PF17755.1 gi|91773139|ref|YP_565831.1| - 7.4e-31 106.8 0.0 5e-29 100.9 0.0 2.9 3 0 0 3 3 2 1 UvrA DNA-binding domain ABC_tran PF00005.27 gi|91773139|ref|YP_565831.1| - 7.5e-21 75.1 0.1 9.7e-09 35.9 0.1 4.3 3 1 0 3 3 3 3 ABC transporter SMC_N PF02463.19 gi|91773139|ref|YP_565831.1| - 6.3e-13 48.7 0.5 0.058 12.8 0.1 4.1 3 1 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91773139|ref|YP_565831.1| - 5.4e-08 32.5 0.6 0.0047 16.6 0.1 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|91773139|ref|YP_565831.1| - 7.6e-08 32.9 0.5 0.05 14.0 0.0 3.8 4 0 0 4 4 4 2 AAA ATPase domain AAA_22 PF13401.6 gi|91773139|ref|YP_565831.1| - 4.8e-06 26.9 0.4 0.092 13.0 0.0 3.6 4 0 0 4 4 4 2 AAA domain RsgA_GTPase PF03193.16 gi|91773139|ref|YP_565831.1| - 8.4e-06 25.8 0.3 0.044 13.7 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase BCA_ABC_TP_C PF12399.8 gi|91773139|ref|YP_565831.1| - 1e-05 25.3 0.9 0.0035 17.2 0.2 2.5 2 0 0 2 2 2 1 Branched-chain amino acid ATP-binding cassette transporter AAA_23 PF13476.6 gi|91773139|ref|YP_565831.1| - 1.3e-05 25.8 0.7 0.11 13.0 0.1 2.6 2 0 0 2 2 2 2 AAA domain AAA_21 PF13304.6 gi|91773139|ref|YP_565831.1| - 0.00026 20.9 13.0 0.0043 16.9 0.0 4.9 4 1 1 5 5 5 1 AAA domain, putative AbiEii toxin, Type IV TA system Viral_helicase1 PF01443.18 gi|91773139|ref|YP_565831.1| - 0.00027 20.8 0.0 0.0084 15.9 0.1 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_18 PF13238.6 gi|91773139|ref|YP_565831.1| - 0.00028 21.5 0.2 1.2 9.7 0.0 2.8 2 0 0 2 2 2 2 AAA domain DnaJ_CXXCXGXG PF00684.19 gi|91773139|ref|YP_565831.1| - 0.00031 21.1 8.3 0.049 14.0 0.3 3.9 4 0 0 4 4 3 1 DnaJ central domain APS_kinase PF01583.20 gi|91773139|ref|YP_565831.1| - 0.00041 20.3 0.1 1.2 9.0 0.0 2.6 2 0 0 2 2 2 2 Adenylylsulphate kinase AAA_24 PF13479.6 gi|91773139|ref|YP_565831.1| - 0.00046 20.0 2.1 0.53 10.0 0.0 3.8 4 0 0 4 4 3 1 AAA domain AAA_14 PF13173.6 gi|91773139|ref|YP_565831.1| - 0.00055 20.0 0.1 4.1 7.4 0.0 3.4 3 0 0 3 3 3 2 AAA domain cobW PF02492.19 gi|91773139|ref|YP_565831.1| - 0.00075 19.1 1.0 0.075 12.6 0.2 2.7 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 gi|91773139|ref|YP_565831.1| - 0.0008 19.6 0.1 2.3 8.4 0.0 3.1 3 0 0 3 3 3 2 AAA domain AAA_15 PF13175.6 gi|91773139|ref|YP_565831.1| - 0.00084 19.1 3.9 2.3 7.8 0.0 4.8 4 1 0 5 5 5 1 AAA ATPase domain AAA_25 PF13481.6 gi|91773139|ref|YP_565831.1| - 0.0021 17.7 0.5 0.97 9.0 0.0 3.3 4 0 0 4 4 3 1 AAA domain MMR_HSR1 PF01926.23 gi|91773139|ref|YP_565831.1| - 0.0029 17.7 0.9 0.25 11.5 0.1 3.1 3 0 0 3 3 2 1 50S ribosome-binding GTPase DUF2075 PF09848.9 gi|91773139|ref|YP_565831.1| - 0.0031 16.8 0.0 1.7 7.8 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) ATPase_2 PF01637.18 gi|91773139|ref|YP_565831.1| - 0.004 17.1 0.2 2.5 8.0 0.0 2.9 3 0 0 3 3 2 1 ATPase domain predominantly from Archaea T2SSE PF00437.20 gi|91773139|ref|YP_565831.1| - 0.0081 15.2 0.8 1.3 8.0 0.2 2.6 2 0 0 2 2 2 1 Type II/IV secretion system protein NB-ARC PF00931.22 gi|91773139|ref|YP_565831.1| - 0.011 14.9 0.1 3.7 6.6 0.0 3.2 3 0 0 3 3 3 0 NB-ARC domain ATPase PF06745.13 gi|91773139|ref|YP_565831.1| - 0.012 14.9 0.2 4.2 6.6 0.0 2.6 2 0 0 2 2 2 0 KaiC NACHT PF05729.12 gi|91773139|ref|YP_565831.1| - 0.015 15.2 0.0 3 7.7 0.0 2.5 2 0 0 2 2 2 0 NACHT domain Cytochrom_c3_2 PF14537.6 gi|91773139|ref|YP_565831.1| - 0.021 15.3 1.6 13 6.3 0.0 3.2 3 0 0 3 3 3 0 Cytochrome c3 AAA_30 PF13604.6 gi|91773139|ref|YP_565831.1| - 0.03 14.1 0.1 3.6 7.3 0.0 2.9 3 0 0 3 3 3 0 AAA domain Zeta_toxin PF06414.12 gi|91773139|ref|YP_565831.1| - 0.037 13.3 0.0 6.7 5.9 0.0 2.5 2 0 0 2 2 2 0 Zeta toxin PRK PF00485.18 gi|91773139|ref|YP_565831.1| - 0.064 13.0 0.1 7.8 6.2 0.0 2.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family RNA_helicase PF00910.22 gi|91773139|ref|YP_565831.1| - 0.068 13.6 0.1 4.6 7.7 0.1 2.5 2 0 0 2 2 2 0 RNA helicase AAA_7 PF12775.7 gi|91773139|ref|YP_565831.1| - 0.068 12.7 0.3 3.2 7.2 0.1 2.5 2 0 0 2 2 2 0 P-loop containing dynein motor region NTPase_1 PF03266.15 gi|91773139|ref|YP_565831.1| - 0.19 11.6 3.7 0.93 9.4 0.2 3.1 3 0 0 3 3 3 0 NTPase YhfH PF14149.6 gi|91773139|ref|YP_565831.1| - 2.8 8.0 5.0 1.6 8.7 0.0 3.2 4 0 0 4 4 3 0 YhfH-like protein Zn-ribbon_8 PF09723.10 gi|91773139|ref|YP_565831.1| - 2.9 8.1 12.8 5.5 7.2 1.6 4.0 4 0 0 4 4 4 0 Zinc ribbon domain FmdE PF02663.14 gi|91773140|ref|YP_565832.1| - 2.1e-42 144.3 0.0 2.9e-42 143.8 0.0 1.2 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.17 gi|91773140|ref|YP_565832.1| - 1.1e-11 44.5 2.8 1.9e-11 43.7 2.8 1.3 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger LIM PF00412.22 gi|91773140|ref|YP_565832.1| - 0.029 14.6 0.4 0.059 13.6 0.4 1.4 1 0 0 1 1 1 0 LIM domain ISN1 PF06437.11 gi|91773140|ref|YP_565832.1| - 0.088 11.7 0.1 0.13 11.1 0.1 1.2 1 0 0 1 1 1 0 IMP-specific 5'-nucleotidase DUF1706 PF08020.11 gi|91773140|ref|YP_565832.1| - 0.15 11.9 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1706) Sdh5 PF03937.16 gi|91773140|ref|YP_565832.1| - 0.18 11.8 0.1 0.54 10.3 0.0 1.8 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase Lyase_1 PF00206.20 gi|91773141|ref|YP_565833.1| - 1.6e-56 192.0 3.8 2.5e-56 191.4 3.8 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|91773141|ref|YP_565833.1| - 1.4e-20 73.6 0.1 7.1e-20 71.3 0.0 2.2 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus FumaraseC_C PF10415.9 gi|91773141|ref|YP_565833.1| - 0.011 16.1 0.2 0.068 13.6 0.0 2.5 2 0 0 2 2 2 0 Fumarase C C-terminus ASL_C2 PF14698.6 gi|91773141|ref|YP_565833.1| - 0.016 15.9 0.2 0.086 13.6 0.0 2.3 2 0 0 2 2 2 0 Argininosuccinate lyase C-terminal DUF1844 PF08899.11 gi|91773141|ref|YP_565833.1| - 0.18 12.1 0.8 2.4 8.5 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1844) TrmB PF01978.19 gi|91773142|ref|YP_565834.1| - 0.00011 22.0 0.0 0.00034 20.4 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|91773142|ref|YP_565834.1| - 0.00025 21.3 0.0 0.00066 20.0 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulator HTH_24 PF13412.6 gi|91773142|ref|YP_565834.1| - 0.0003 20.3 0.0 0.00058 19.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|91773142|ref|YP_565834.1| - 0.00054 19.8 0.0 0.0014 18.4 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|91773142|ref|YP_565834.1| - 0.00056 19.7 0.0 0.00093 19.0 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain TFIIE_alpha PF02002.17 gi|91773142|ref|YP_565834.1| - 0.0024 17.7 0.0 0.0049 16.7 0.0 1.6 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_11 PF08279.12 gi|91773142|ref|YP_565834.1| - 0.011 15.7 0.1 0.02 14.8 0.1 1.5 1 0 0 1 1 1 0 HTH domain MarR_2 PF12802.7 gi|91773142|ref|YP_565834.1| - 0.018 14.9 0.0 0.039 13.8 0.0 1.5 1 0 0 1 1 1 0 MarR family MarR PF01047.22 gi|91773142|ref|YP_565834.1| - 0.064 13.2 0.0 0.64 10.0 0.0 2.2 2 0 0 2 2 2 0 MarR family HTH_23 PF13384.6 gi|91773142|ref|YP_565834.1| - 0.09 12.6 0.0 0.31 10.9 0.0 1.9 1 0 0 1 1 1 0 Homeodomain-like domain HTH_34 PF13601.6 gi|91773142|ref|YP_565834.1| - 0.12 12.6 0.0 0.25 11.6 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF488 PF04343.13 gi|91773143|ref|YP_565835.1| - 7.1e-28 97.6 0.0 1.6e-27 96.6 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function, DUF488 HemN_C PF06969.16 gi|91773143|ref|YP_565835.1| - 0.00032 20.7 0.0 0.00078 19.5 0.0 1.6 1 0 0 1 1 1 1 HemN C-terminal domain DUF4326 PF14216.6 gi|91773143|ref|YP_565835.1| - 0.034 14.9 0.4 0.75 10.6 0.4 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4326) YqfD PF06898.11 gi|91773143|ref|YP_565835.1| - 0.036 12.9 0.9 0.052 12.4 0.0 1.7 2 0 0 2 2 2 0 Putative stage IV sporulation protein YqfD HTH_45 PF14947.6 gi|91773143|ref|YP_565835.1| - 0.5 10.4 0.1 0.5 10.4 0.1 3.0 4 0 0 4 4 4 0 Winged helix-turn-helix Phage_integrase PF00589.22 gi|91773145|ref|YP_565837.1| - 0.00012 21.9 0.0 0.00013 21.8 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family LPD15 PF18828.1 gi|91773146|ref|YP_565838.1| - 0.024 14.5 0.4 0.067 13.1 0.4 1.7 1 1 0 1 1 1 0 Large polyvalent-protein-associated domain 15 Cytochrom_B562 PF07361.11 gi|91773146|ref|YP_565838.1| - 0.079 13.6 0.1 0.1 13.2 0.1 1.2 1 0 0 1 1 1 0 Cytochrome b562 PAS PF00989.25 gi|91773147|ref|YP_565839.1| - 3.3e-24 85.1 0.1 7.3e-13 48.5 0.0 2.9 3 0 0 3 3 3 2 PAS fold PAS_3 PF08447.12 gi|91773147|ref|YP_565839.1| - 1.4e-21 76.5 0.0 1.3e-14 54.2 0.0 2.6 2 0 0 2 2 2 2 PAS fold HATPase_c PF02518.26 gi|91773147|ref|YP_565839.1| - 3.4e-21 75.8 0.3 8.2e-21 74.6 0.3 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|91773147|ref|YP_565839.1| - 2.7e-20 72.7 0.0 4e-11 43.1 0.0 2.4 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.7 gi|91773147|ref|YP_565839.1| - 5.2e-20 71.6 0.9 1.1e-09 38.4 0.1 2.8 2 0 0 2 2 2 2 PAS domain HisKA PF00512.25 gi|91773147|ref|YP_565839.1| - 5.7e-19 67.9 0.1 2.5e-18 65.9 0.0 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 gi|91773147|ref|YP_565839.1| - 5.9e-08 32.5 0.1 0.00064 19.7 0.0 2.7 2 0 0 2 2 2 2 PAS domain HATPase_c_3 PF13589.6 gi|91773147|ref|YP_565839.1| - 6.6e-06 26.0 0.0 1.6e-05 24.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.6 gi|91773147|ref|YP_565839.1| - 5.3e-05 23.3 0.0 0.0089 16.1 0.0 2.5 2 0 0 2 2 2 1 PAS domain PAS_7 PF12860.7 gi|91773147|ref|YP_565839.1| - 0.0099 16.0 0.0 0.17 12.1 0.0 2.7 1 1 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 gi|91773147|ref|YP_565839.1| - 0.021 14.8 0.1 0.13 12.3 0.0 2.2 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain DDE_Tnp_IS66 PF03050.14 gi|91773148|ref|YP_565840.1| - 1.9e-67 227.7 0.4 6.3e-67 226.0 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91773148|ref|YP_565840.1| - 9e-11 42.0 3.8 2.7e-10 40.5 3.8 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 SlyX PF04102.12 gi|91773148|ref|YP_565840.1| - 5.2e-05 23.8 0.7 0.00014 22.4 0.7 1.7 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91773148|ref|YP_565840.1| - 0.00011 22.5 0.3 0.17 12.1 0.2 2.8 3 0 0 3 3 3 2 DDE domain BST2 PF16716.5 gi|91773148|ref|YP_565840.1| - 0.067 13.8 1.4 0.3 11.7 1.4 2.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Zn_Tnp_IS1595 PF12760.7 gi|91773148|ref|YP_565840.1| - 0.14 12.2 2.7 0.83 9.7 0.8 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF16 PF01519.16 gi|91773148|ref|YP_565840.1| - 0.14 12.7 2.6 0.55 10.7 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF16 Lar_restr_allev PF14354.6 gi|91773148|ref|YP_565840.1| - 0.36 11.2 6.9 0.52 10.7 4.5 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91773148|ref|YP_565840.1| - 1 10.1 8.9 7.1 7.4 1.5 3.6 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PLATZ PF04640.14 gi|91773148|ref|YP_565840.1| - 2.1 9.0 6.0 0.65 10.7 1.1 2.7 2 1 0 2 2 2 0 PLATZ transcription factor MarR_2 PF12802.7 gi|91773149|ref|YP_565841.1| - 7.1e-06 25.8 0.0 7.7e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|91773149|ref|YP_565841.1| - 7.3e-06 25.8 0.1 1.1e-05 25.2 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|91773149|ref|YP_565841.1| - 2.8e-05 23.9 0.0 3.2e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|91773149|ref|YP_565841.1| - 4.2e-05 23.0 0.0 5.2e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|91773149|ref|YP_565841.1| - 0.00065 20.0 0.0 0.00079 19.7 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 gi|91773149|ref|YP_565841.1| - 0.0022 18.2 0.0 0.0027 17.9 0.0 1.1 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|91773149|ref|YP_565841.1| - 0.0032 17.9 0.0 0.0034 17.8 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|91773149|ref|YP_565841.1| - 0.008 16.0 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain z-alpha PF02295.17 gi|91773149|ref|YP_565841.1| - 0.033 14.2 0.0 0.041 13.9 0.0 1.1 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain HTH_11 PF08279.12 gi|91773149|ref|YP_565841.1| - 0.061 13.3 0.0 0.062 13.3 0.0 1.1 1 0 0 1 1 1 0 HTH domain MarR PF01047.22 gi|91773149|ref|YP_565841.1| - 0.069 13.1 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|91773149|ref|YP_565841.1| - 0.12 12.4 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Mrr_N PF14338.6 gi|91773149|ref|YP_565841.1| - 0.18 12.0 0.0 0.37 11.0 0.0 1.7 1 1 0 1 1 1 0 Mrr N-terminal domain Ribosomal_S10 PF00338.22 gi|91773150|ref|YP_565842.1| - 6.8e-27 93.6 0.0 7.6e-27 93.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.27 gi|91773151|ref|YP_565843.1| - 1e-56 191.6 0.0 1.3e-56 191.2 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|91773151|ref|YP_565843.1| - 3.9e-36 123.8 0.1 1.3e-35 122.0 0.0 2.0 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|91773151|ref|YP_565843.1| - 4.6e-17 62.2 0.9 1.7e-16 60.4 0.6 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|91773151|ref|YP_565843.1| - 1e-06 28.8 0.0 1.2e-05 25.4 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|91773151|ref|YP_565843.1| - 0.0017 17.9 0.2 0.026 14.0 0.1 2.5 2 1 0 2 2 2 1 Ferrous iron transport protein B Gtr1_RagA PF04670.12 gi|91773151|ref|YP_565843.1| - 0.0034 16.8 0.0 0.07 12.5 0.0 2.1 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Dynamin_N PF00350.23 gi|91773151|ref|YP_565843.1| - 0.0042 17.2 0.0 2.6 8.1 0.0 2.3 1 1 1 2 2 2 2 Dynamin family GTP_EFTU_D4 PF14578.6 gi|91773151|ref|YP_565843.1| - 0.012 15.6 0.3 0.026 14.4 0.3 1.6 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Septin PF00735.18 gi|91773151|ref|YP_565843.1| - 0.013 14.8 0.0 0.028 13.7 0.0 1.5 1 0 0 1 1 1 0 Septin Ras PF00071.22 gi|91773151|ref|YP_565843.1| - 0.022 14.3 0.7 0.068 12.8 0.1 2.0 2 0 0 2 2 2 0 Ras family Roc PF08477.13 gi|91773151|ref|YP_565843.1| - 0.045 14.0 0.1 2.7 8.2 0.1 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase DUF5511 PF17630.2 gi|91773151|ref|YP_565843.1| - 0.11 12.7 0.1 0.48 10.6 0.1 2.0 1 0 0 1 1 1 0 Family of unknown function (DUF5511) ATP_bind_1 PF03029.17 gi|91773151|ref|YP_565843.1| - 0.17 11.6 0.3 1.1 9.0 0.3 2.0 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 gi|91773152|ref|YP_565844.1| - 1.6e-64 217.0 0.1 2.8e-64 216.2 0.1 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|91773152|ref|YP_565844.1| - 8.8e-31 106.2 0.2 3.3e-30 104.3 0.1 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|91773152|ref|YP_565844.1| - 7.1e-26 90.1 1.3 5.6e-24 84.0 0.9 2.8 3 0 0 3 3 3 1 Elongation Factor G, domain II EFG_C PF00679.24 gi|91773152|ref|YP_565844.1| - 1.2e-23 82.9 0.1 3.1e-23 81.6 0.1 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|91773152|ref|YP_565844.1| - 9.4e-15 54.8 0.2 3e-14 53.1 0.2 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|91773152|ref|YP_565844.1| - 5.8e-05 23.1 0.1 0.00018 21.6 0.1 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 gi|91773152|ref|YP_565844.1| - 0.0032 17.3 0.1 0.014 15.2 0.0 2.0 1 1 0 2 2 2 1 Class II release factor RF3, C-terminal domain Ras PF00071.22 gi|91773152|ref|YP_565844.1| - 0.053 13.1 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Ras family RsgA_GTPase PF03193.16 gi|91773152|ref|YP_565844.1| - 0.17 11.8 0.5 0.63 9.9 0.3 2.0 2 0 0 2 2 2 0 RsgA GTPase Ribosomal_S7 PF00177.21 gi|91773153|ref|YP_565845.1| - 1e-37 129.1 4.2 1.2e-37 128.8 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e G-7-MTase PF12803.7 gi|91773153|ref|YP_565845.1| - 0.071 12.3 0.1 0.15 11.2 0.1 1.5 2 0 0 2 2 2 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) Ribosom_S12_S23 PF00164.25 gi|91773154|ref|YP_565846.1| - 7.7e-47 157.6 0.2 1.4e-46 156.8 0.2 1.4 2 0 0 2 2 2 1 Ribosomal protein S12/S23 KH_2 PF07650.17 gi|91773155|ref|YP_565847.1| - 4.8e-20 71.2 1.5 2.7e-13 49.5 0.0 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.6 gi|91773155|ref|YP_565847.1| - 7.1e-11 42.0 2.6 1.4e-08 34.7 0.2 2.2 2 0 0 2 2 2 2 NusA-like KH domain KH_4 PF13083.6 gi|91773155|ref|YP_565847.1| - 7.9e-06 25.7 0.2 0.008 16.0 0.1 2.3 2 0 0 2 2 2 2 KH domain KH_1 PF00013.29 gi|91773155|ref|YP_565847.1| - 0.00039 20.2 1.6 0.21 11.4 0.2 2.5 1 1 1 2 2 2 2 KH domain Ribosomal_L7Ae PF01248.26 gi|91773156|ref|YP_565848.1| - 1e-12 47.6 0.2 1.3e-12 47.3 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNA_pol_Rpb1_5 PF04998.17 gi|91773157|ref|YP_565849.1| - 3.3e-54 184.1 0.9 4.5e-54 183.7 0.9 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 ABC1 PF03109.16 gi|91773157|ref|YP_565849.1| - 0.15 12.3 0.3 0.28 11.3 0.3 1.4 1 0 0 1 1 1 0 ABC1 family RNA_pol_Rpb1_1 PF04997.12 gi|91773158|ref|YP_565850.1| - 6.5e-105 350.9 0.0 1e-104 350.2 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|91773158|ref|YP_565850.1| - 5.1e-69 231.7 0.2 9.2e-69 230.9 0.2 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|91773158|ref|YP_565850.1| - 3.5e-32 111.5 0.0 6.3e-32 110.7 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|91773158|ref|YP_565850.1| - 3.7e-32 110.5 0.0 8.4e-32 109.3 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.17 gi|91773158|ref|YP_565850.1| - 4.1e-28 98.6 0.1 7.5e-28 97.7 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 UPF0564 PF10595.9 gi|91773158|ref|YP_565850.1| - 0.12 11.4 0.9 0.27 10.2 0.2 1.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0564 RNA_pol_Rpb2_6 PF00562.28 gi|91773159|ref|YP_565851.1| - 2.3e-121 405.5 0.0 2.8e-121 405.3 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 gi|91773159|ref|YP_565851.1| - 3.6e-30 104.2 0.1 7.8e-30 103.1 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 gi|91773159|ref|YP_565851.1| - 2.2e-17 63.1 0.1 4.6e-17 62.1 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|91773159|ref|YP_565851.1| - 1.8e-09 38.0 3.2 5.6e-09 36.4 3.2 1.9 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 5 DUF1451 PF07295.11 gi|91773159|ref|YP_565851.1| - 0.00084 19.4 0.4 0.0015 18.6 0.4 1.3 1 0 0 1 1 1 1 Zinc-ribbon containing domain zf-NADH-PPase PF09297.11 gi|91773159|ref|YP_565851.1| - 0.012 15.3 0.5 0.14 11.9 0.0 2.5 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Nudix_N_2 PF14803.6 gi|91773159|ref|YP_565851.1| - 0.018 14.9 0.3 4.4 7.3 0.1 2.8 2 0 0 2 2 2 0 Nudix N-terminal TF_Zn_Ribbon PF08271.12 gi|91773159|ref|YP_565851.1| - 1.1 8.8 2.9 8 6.1 2.8 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding RNA_pol_Rpb2_1 PF04563.15 gi|91773160|ref|YP_565852.1| - 2e-55 187.5 0.1 2.7e-55 187.1 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 gi|91773160|ref|YP_565852.1| - 1.4e-26 92.4 0.0 2.4e-26 91.7 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_2 PF04561.14 gi|91773160|ref|YP_565852.1| - 1.2e-23 83.8 0.0 1.8e-23 83.2 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb5_C PF01191.19 gi|91773161|ref|YP_565853.1| - 1.3e-28 98.6 0.2 1.5e-28 98.5 0.2 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain AdoHcyase PF05221.17 gi|91773162|ref|YP_565854.1| - 1.8e-52 178.4 0.0 4.5e-26 91.7 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|91773162|ref|YP_565854.1| - 2.6e-50 170.7 1.2 2.6e-50 170.7 1.2 1.9 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|91773162|ref|YP_565854.1| - 4.1e-09 36.0 0.1 8.1e-09 35.1 0.1 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|91773162|ref|YP_565854.1| - 2.8e-06 27.0 0.3 5.9e-06 25.9 0.1 1.6 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain TSCPD PF12637.7 gi|91773162|ref|YP_565854.1| - 0.017 15.3 0.2 1.6 9.1 0.2 2.6 2 0 0 2 2 2 0 TSCPD domain Amidohydro_1 PF01979.20 gi|91773163|ref|YP_565855.1| - 2.2e-69 234.4 1.0 2.6e-69 234.2 1.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|91773163|ref|YP_565855.1| - 3.5e-22 79.5 4.3 9.3e-14 51.7 0.2 3.3 2 1 1 3 3 3 2 Amidohydrolase family A_deaminase PF00962.22 gi|91773163|ref|YP_565855.1| - 0.0063 15.9 0.1 0.011 15.1 0.1 1.4 1 1 0 1 1 1 1 Adenosine/AMP deaminase VirK PF06903.12 gi|91773163|ref|YP_565855.1| - 0.023 14.8 0.0 0.078 13.1 0.0 1.9 1 0 0 1 1 1 0 VirK protein DUF3700 PF12481.8 gi|91773163|ref|YP_565855.1| - 0.12 11.8 0.1 3.4 7.1 0.0 2.1 2 0 0 2 2 2 0 Aluminium induced protein RL10P_insert PF17777.1 gi|91773163|ref|YP_565855.1| - 0.16 12.0 0.2 3.1 7.9 0.0 3.0 4 0 0 4 4 4 0 Insertion domain in 60S ribosomal protein L10P HD PF01966.22 gi|91773164|ref|YP_565856.1| - 6.3e-12 45.8 2.0 9e-12 45.3 2.0 1.2 1 0 0 1 1 1 1 HD domain PPS_PS PF02006.16 gi|91773165|ref|YP_565857.1| - 3.9e-75 251.3 0.4 4.8e-75 251.0 0.4 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase Band_7 PF01145.25 gi|91773166|ref|YP_565858.1| - 5.7e-29 101.4 1.0 8.5e-29 100.8 1.0 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family GHMP_kinases_N PF00288.26 gi|91773167|ref|YP_565859.1| - 2.2e-10 40.6 2.3 5.2e-10 39.4 2.3 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|91773167|ref|YP_565859.1| - 0.00018 21.8 0.4 0.0007 19.9 0.1 2.0 2 0 0 2 2 2 1 GHMP kinases C terminal DFP PF04127.15 gi|91773168|ref|YP_565860.1| - 2.6e-47 161.1 1.1 2.5e-46 157.8 0.2 2.1 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|91773168|ref|YP_565860.1| - 2.9e-34 118.1 1.0 5.7e-34 117.1 1.0 1.5 1 0 0 1 1 1 1 Flavoprotein YqaH PF17448.2 gi|91773168|ref|YP_565860.1| - 2.7 8.3 5.3 21 5.5 0.0 4.0 5 1 0 5 5 5 0 Uncharacterized YqaH-like acVLRF1 PF18859.1 gi|91773169|ref|YP_565861.1| - 1.4e-14 54.5 0.0 2.7e-14 53.6 0.0 1.4 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor eRF1_2 PF03464.15 gi|91773169|ref|YP_565861.1| - 2.4e-07 31.1 0.2 1.2e-06 28.8 0.0 2.2 2 1 0 2 2 2 1 eRF1 domain 2 baeRF_family10 PF18854.1 gi|91773169|ref|YP_565861.1| - 8.6e-06 26.1 0.0 2.4e-05 24.6 0.0 1.7 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 baeRF_family2 PF18844.1 gi|91773169|ref|YP_565861.1| - 0.011 15.7 0.0 0.024 14.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 LUC7 PF03194.15 gi|91773169|ref|YP_565861.1| - 0.048 13.3 5.4 0.1 12.3 5.4 1.6 1 0 0 1 1 1 0 LUC7 N_terminus HR1 PF02185.16 gi|91773169|ref|YP_565861.1| - 0.049 13.8 9.5 0.32 11.1 9.5 2.5 1 1 0 1 1 1 0 Hr1 repeat ATP-synt_DE PF00401.20 gi|91773169|ref|YP_565861.1| - 0.057 13.7 1.2 0.15 12.4 1.2 1.7 1 0 0 1 1 1 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Csd3_N PF18059.1 gi|91773169|ref|YP_565861.1| - 0.071 13.6 0.1 0.25 11.9 0.1 1.9 1 0 0 1 1 1 0 Csd3 N-terminal CobN-Mg_chel PF02514.16 gi|91773169|ref|YP_565861.1| - 0.09 10.5 2.8 0.11 10.2 2.8 1.0 1 0 0 1 1 1 0 CobN/Magnesium Chelatase DAGK_cat PF00781.24 gi|91773169|ref|YP_565861.1| - 0.18 11.5 2.5 0.22 11.2 0.8 2.1 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain DUF724 PF05266.14 gi|91773169|ref|YP_565861.1| - 1.1 9.0 9.7 2.5 7.9 9.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF724) HemX PF04375.14 gi|91773169|ref|YP_565861.1| - 3.7 6.8 10.2 0.33 10.2 5.0 1.8 2 0 0 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3502 PF12010.8 gi|91773170|ref|YP_565862.1| - 0.11 13.1 0.0 0.25 12.0 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3502) DUF2508 PF10704.9 gi|91773170|ref|YP_565862.1| - 0.74 10.0 5.5 0.44 10.8 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2508) FtsJ PF01728.19 gi|91773171|ref|YP_565863.1| - 9.5e-56 188.7 0.0 2.4e-55 187.4 0.0 1.6 2 0 0 2 2 2 1 FtsJ-like methyltransferase TRAM PF01938.20 gi|91773171|ref|YP_565863.1| - 6.4e-06 26.1 1.5 1.1e-05 25.3 1.5 1.4 1 0 0 1 1 1 1 TRAM domain Methyltransf_23 PF13489.6 gi|91773171|ref|YP_565863.1| - 6.3e-05 22.9 0.0 0.00023 21.0 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91773171|ref|YP_565863.1| - 9.3e-05 22.3 0.1 0.002 17.9 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91773171|ref|YP_565863.1| - 0.022 15.5 0.2 3.7 8.3 0.1 2.8 1 1 1 2 2 2 0 Methyltransferase domain NAD_binding_10 PF13460.6 gi|91773171|ref|YP_565863.1| - 0.043 13.7 0.1 0.081 12.8 0.1 1.5 1 1 0 1 1 1 0 NAD(P)H-binding DUF211 PF02680.14 gi|91773172|ref|YP_565864.1| - 6.2e-38 128.8 1.7 6.9e-38 128.7 1.7 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 MCR_beta PF02241.18 gi|91773172|ref|YP_565864.1| - 0.13 11.8 0.2 0.15 11.6 0.2 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase beta subunit, C-terminal domain PHP PF02811.19 gi|91773173|ref|YP_565865.1| - 1.4e-08 35.2 0.0 1.6e-08 35.0 0.0 1.3 1 1 0 1 1 1 1 PHP domain RNase_P_p30 PF01876.16 gi|91773173|ref|YP_565865.1| - 1.5e-05 24.6 0.0 6e-05 22.6 0.0 1.9 1 1 0 1 1 1 1 RNase P subunit p30 TetR_C_1 PF02909.17 gi|91773173|ref|YP_565865.1| - 0.079 12.8 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Ham1p_like PF01725.16 gi|91773175|ref|YP_565867.1| - 1.4e-53 181.6 0.0 1.5e-53 181.5 0.0 1.0 1 0 0 1 1 1 1 Ham1 family APH PF01636.23 gi|91773176|ref|YP_565868.1| - 4.7e-08 33.2 0.0 0.00049 20.1 0.0 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 gi|91773176|ref|YP_565868.1| - 7.5e-08 32.2 0.0 1.1e-07 31.7 0.0 1.4 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 gi|91773176|ref|YP_565868.1| - 4.6e-05 22.9 0.0 0.00057 19.3 0.0 2.1 1 1 1 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 gi|91773176|ref|YP_565868.1| - 8.4e-05 22.1 0.0 9.9e-05 21.8 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain EcKinase PF02958.20 gi|91773176|ref|YP_565868.1| - 0.011 15.1 0.0 0.015 14.6 0.0 1.3 1 0 0 1 1 1 0 Ecdysteroid kinase Pkinase_Tyr PF07714.17 gi|91773176|ref|YP_565868.1| - 0.027 13.8 0.0 0.028 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase Choline_kinase PF01633.20 gi|91773176|ref|YP_565868.1| - 0.041 13.5 0.0 0.082 12.5 0.0 1.5 1 1 1 2 2 2 0 Choline/ethanolamine kinase Peptidase_M22 PF00814.25 gi|91773177|ref|YP_565869.1| - 6.7e-90 301.5 0.0 7.8e-90 301.2 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 gi|91773177|ref|YP_565869.1| - 0.0076 16.0 0.0 0.04 13.6 0.0 1.9 2 0 0 2 2 2 1 Carbamoyltransferase N-terminus Big_9 PF17963.1 gi|91773179|ref|YP_565871.1| - 0.057 14.2 0.1 0.15 12.9 0.1 1.6 1 0 0 1 1 1 0 Bacterial Ig domain Wzt_C PF14524.6 gi|91773179|ref|YP_565871.1| - 0.11 12.5 0.0 0.27 11.3 0.0 1.7 1 0 0 1 1 1 0 Wzt C-terminal domain MarR_2 PF12802.7 gi|91773180|ref|YP_565872.1| - 0.00049 19.9 0.0 0.00074 19.4 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|91773180|ref|YP_565872.1| - 0.0016 18.0 0.4 0.0035 16.9 0.3 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|91773180|ref|YP_565872.1| - 0.0021 18.0 0.1 0.0031 17.4 0.1 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|91773180|ref|YP_565872.1| - 0.0042 16.9 0.1 0.0087 15.9 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|91773180|ref|YP_565872.1| - 0.014 15.2 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|91773180|ref|YP_565872.1| - 0.04 13.8 0.2 0.16 11.9 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|91773180|ref|YP_565872.1| - 0.067 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain UNC-93 PF05978.16 gi|91773180|ref|YP_565872.1| - 0.078 12.7 0.1 0.1 12.3 0.1 1.1 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 TFIIE_alpha PF02002.17 gi|91773180|ref|YP_565872.1| - 0.12 12.2 0.2 0.12 12.2 0.2 1.6 2 0 0 2 2 2 0 TFIIE alpha subunit Fe_dep_repress PF01325.19 gi|91773180|ref|YP_565872.1| - 0.13 12.5 0.0 0.2 11.9 0.0 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain TcfC PF16967.5 gi|91773181|ref|YP_565873.1| - 0.019 14.5 0.8 0.05 13.1 0.2 2.0 2 0 0 2 2 2 0 E-set like domain HEAT_2 PF13646.6 gi|91773182|ref|YP_565874.1| - 4.2e-104 341.2 21.5 7e-19 68.0 0.4 8.8 3 3 6 9 9 9 8 HEAT repeats HEAT_PBS PF03130.16 gi|91773182|ref|YP_565874.1| - 7.1e-62 199.8 29.1 3.7e-06 27.1 0.0 14.7 15 0 0 15 15 15 12 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|91773182|ref|YP_565874.1| - 1.9e-46 152.1 1.6 0.00011 22.1 0.0 14.7 15 0 0 15 15 15 10 HEAT repeat HEAT_EZ PF13513.6 gi|91773182|ref|YP_565874.1| - 6.4e-26 90.4 17.2 0.019 15.5 0.0 14.0 14 1 1 15 15 15 4 HEAT-like repeat Arm PF00514.23 gi|91773182|ref|YP_565874.1| - 3e-22 77.9 3.8 0.0012 18.9 0.0 11.9 9 2 5 14 14 14 4 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|91773182|ref|YP_565874.1| - 8e-16 58.5 2.7 0.049 13.7 0.0 7.0 3 3 2 5 5 5 4 non-SMC mitotic condensation complex subunit 1 Vitellogenin_N PF01347.22 gi|91773182|ref|YP_565874.1| - 2.7e-11 42.6 0.2 0.0024 16.3 0.0 4.6 3 1 1 4 4 4 4 Lipoprotein amino terminal region Adaptin_N PF01602.20 gi|91773182|ref|YP_565874.1| - 2e-09 36.6 0.2 8.7e-05 21.3 0.0 3.7 2 1 0 2 2 2 2 Adaptin N terminal region Aconitase_B_N PF11791.8 gi|91773182|ref|YP_565874.1| - 3.9e-08 33.5 6.2 2.6 8.1 0.0 7.4 5 2 2 8 8 8 2 Aconitate B N-terminal domain ERAP1_C PF11838.8 gi|91773182|ref|YP_565874.1| - 0.00039 20.1 3.6 0.19 11.2 0.2 3.8 2 1 0 4 4 4 1 ERAP1-like C-terminal domain RasGEF_N_2 PF14663.6 gi|91773182|ref|YP_565874.1| - 0.007 16.8 0.5 9.3 6.7 0.0 5.3 5 2 1 6 6 6 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain IBN_N PF03810.19 gi|91773182|ref|YP_565874.1| - 0.013 15.4 0.6 8.2 6.4 0.0 4.7 4 1 0 4 4 4 0 Importin-beta N-terminal domain UPF0147 PF03685.13 gi|91773182|ref|YP_565874.1| - 0.015 15.3 10.7 11 6.2 0.1 7.0 5 3 2 7 7 7 0 Uncharacterised protein family (UPF0147) YmgB PF10798.8 gi|91773182|ref|YP_565874.1| - 0.069 13.0 1.5 30 4.5 0.0 4.5 3 1 2 5 5 5 0 Biofilm development protein YmgB/AriR API5 PF05918.11 gi|91773182|ref|YP_565874.1| - 0.069 11.9 2.8 8.2 5.1 0.0 3.2 3 0 0 3 3 3 0 Apoptosis inhibitory protein 5 (API5) DUF2877 PF11392.8 gi|91773182|ref|YP_565874.1| - 0.12 13.1 0.0 11 6.7 0.0 3.6 4 0 0 4 4 3 0 Protein of unknown function (DUF2877) Vac14_Fab1_bd PF12755.7 gi|91773182|ref|YP_565874.1| - 0.13 12.9 2.2 89 3.8 0.0 5.7 6 1 2 8 8 8 0 Vacuolar 14 Fab1-binding region TraW_N PF12477.8 gi|91773182|ref|YP_565874.1| - 0.2 11.7 2.3 19 5.4 0.1 3.3 3 0 0 3 3 3 0 Sex factor F TraW protein N terminal TP6A_N PF04406.14 gi|91773183|ref|YP_565875.1| - 2.4e-13 49.9 0.3 4.6e-13 48.9 0.3 1.5 1 0 0 1 1 1 1 Type IIB DNA topoisomerase Topo-VIb_trans PF09239.11 gi|91773184|ref|YP_565876.1| - 4.8e-67 224.7 0.0 8.3e-67 224.0 0.0 1.4 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer Top6b_C PF18000.1 gi|91773184|ref|YP_565876.1| - 3.5e-44 149.6 0.0 7.9e-44 148.5 0.0 1.6 1 0 0 1 1 1 1 Type 2 DNA topoisomerase 6 subunit B C-terminal domain HATPase_c PF02518.26 gi|91773184|ref|YP_565876.1| - 1.8e-10 41.3 0.0 3.7e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|91773184|ref|YP_565876.1| - 6.9e-07 29.2 0.0 1.4e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FbpA PF05833.11 gi|91773184|ref|YP_565876.1| - 0.00091 18.1 0.0 0.0019 17.0 0.0 1.5 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) RPAP1_N PF08621.10 gi|91773184|ref|YP_565876.1| - 0.052 13.3 0.2 0.2 11.4 0.2 2.0 1 0 0 1 1 1 0 RPAP1-like, N-terminal Ribosomal_S13 PF00416.22 gi|91773184|ref|YP_565876.1| - 0.089 13.2 0.1 1.1 9.7 0.0 2.5 3 0 0 3 3 3 0 Ribosomal protein S13/S18 dCMP_cyt_deam_1 PF00383.23 gi|91773185|ref|YP_565877.1| - 3.7e-20 71.7 0.0 4.5e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|91773185|ref|YP_565877.1| - 1.2e-18 67.2 0.0 1.5e-18 66.9 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase SNAD4 PF18750.1 gi|91773185|ref|YP_565877.1| - 0.014 15.5 0.0 0.036 14.2 0.0 1.6 2 0 0 2 2 2 0 Secreted Novel AID/APOBEC-like Deaminase 4 Bd3614-deam PF14439.6 gi|91773185|ref|YP_565877.1| - 0.026 14.6 0.0 0.038 14.1 0.0 1.3 1 0 0 1 1 1 0 Bd3614-like deaminase NAD1 PF18778.1 gi|91773185|ref|YP_565877.1| - 0.15 12.1 0.0 0.53 10.4 0.0 1.7 2 0 0 2 2 2 0 Novel AID APOBEC clade 1 Peptidase_U32 PF01136.19 gi|91773186|ref|YP_565878.1| - 3.8e-81 271.7 0.0 5.2e-81 271.2 0.0 1.2 1 0 0 1 1 1 1 Peptidase family U32 GyrI-like PF06445.15 gi|91773187|ref|YP_565879.1| - 2.4e-18 66.9 0.1 2.7e-18 66.7 0.1 1.1 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 gi|91773187|ref|YP_565879.1| - 1.2e-07 32.0 0.1 1.4e-07 31.8 0.1 1.1 1 0 0 1 1 1 1 Integron-associated effector binding protein DUF2878 PF11086.8 gi|91773188|ref|YP_565880.1| - 0.025 14.8 7.6 0.029 14.6 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2878) Thioredoxin PF00085.20 gi|91773189|ref|YP_565881.1| - 0.038 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin DUF2178 PF09946.9 gi|91773190|ref|YP_565882.1| - 2.7e-08 33.9 7.2 3.9e-08 33.4 7.2 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) DUF4191 PF13829.6 gi|91773190|ref|YP_565882.1| - 0.16 11.3 5.9 0.97 8.7 1.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) DUF1430 PF07242.11 gi|91773190|ref|YP_565882.1| - 1.3 9.4 12.6 1.8 8.9 7.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1430) DUF2417 PF10329.9 gi|91773190|ref|YP_565882.1| - 3.5 7.0 7.6 0.93 8.9 2.9 1.9 1 1 0 2 2 2 0 Region of unknown function (DUF2417) HTH_3 PF01381.22 gi|91773191|ref|YP_565883.1| - 2.2e-15 56.5 0.3 2.5e-15 56.3 0.3 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|91773191|ref|YP_565883.1| - 4.1e-10 39.5 0.2 4.4e-10 39.4 0.2 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|91773191|ref|YP_565883.1| - 2.4e-05 24.7 0.0 2.8e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 gi|91773191|ref|YP_565883.1| - 0.00013 22.2 0.0 0.00015 22.0 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|91773191|ref|YP_565883.1| - 0.0028 17.5 0.2 0.0042 17.0 0.2 1.3 1 0 0 1 1 1 1 HTH domain HTH_37 PF13744.6 gi|91773191|ref|YP_565883.1| - 0.0059 16.5 0.1 0.0099 15.8 0.0 1.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|91773191|ref|YP_565883.1| - 0.0074 16.2 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_25 PF13413.6 gi|91773191|ref|YP_565883.1| - 0.013 15.4 0.0 0.017 15.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|91773191|ref|YP_565883.1| - 0.015 15.1 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_24 PF13412.6 gi|91773191|ref|YP_565883.1| - 0.028 14.0 0.0 0.038 13.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 gi|91773191|ref|YP_565883.1| - 0.048 13.2 0.0 0.072 12.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 MqsA_antitoxin PF15731.5 gi|91773191|ref|YP_565883.1| - 0.067 13.3 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_38 PF13936.6 gi|91773191|ref|YP_565883.1| - 0.1 12.4 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DnaJ PF00226.31 gi|91773192|ref|YP_565884.1| - 1.4e-08 34.7 2.0 2.3e-08 34.1 1.2 1.7 1 1 1 2 2 2 1 DnaJ domain DUF3387 PF11867.8 gi|91773193|ref|YP_565885.1| - 4.1e-132 440.6 16.8 4.1e-132 440.6 16.8 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF3387) SWI2_SNF2 PF18766.1 gi|91773193|ref|YP_565885.1| - 1e-80 270.6 0.1 1e-80 270.6 0.1 2.0 2 0 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|91773193|ref|YP_565885.1| - 9.7e-49 166.0 7.9 4.1e-48 163.9 0.1 3.6 3 1 1 4 4 4 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|91773193|ref|YP_565885.1| - 2.9e-15 56.7 0.0 2.9e-15 56.7 0.0 2.9 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|91773193|ref|YP_565885.1| - 0.00063 20.1 0.2 0.041 14.2 0.0 3.4 3 0 0 3 3 3 1 Helicase conserved C-terminal domain Glyco_hydro_44 PF12891.7 gi|91773193|ref|YP_565885.1| - 0.12 12.3 0.1 0.43 10.5 0.0 1.9 2 0 0 2 2 2 0 Glycoside hydrolase family 44 Virulence_RhuM PF13310.6 gi|91773194|ref|YP_565886.1| - 3.9e-108 360.5 5.0 5e-108 360.1 5.0 1.1 1 0 0 1 1 1 1 Virulence protein RhuM family GerE PF00196.19 gi|91773194|ref|YP_565886.1| - 0.084 12.4 0.0 0.26 10.9 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Virulence_RhuM PF13310.6 gi|91773195|ref|YP_565887.1| - 1.1e-115 385.2 9.1 1.5e-115 384.8 9.1 1.1 1 0 0 1 1 1 1 Virulence protein RhuM family HTH_38 PF13936.6 gi|91773195|ref|YP_565887.1| - 0.038 13.8 0.0 0.091 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4271 PF14093.6 gi|91773197|ref|YP_565889.1| - 4.5 7.1 28.3 13 5.6 28.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4271) Methylase_S PF01420.19 gi|91773198|ref|YP_565890.1| - 4.3e-39 134.4 0.8 2.3e-21 76.8 0.0 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain YhcG_C PF06250.11 gi|91773199|ref|YP_565891.1| - 1.2e-66 223.4 3.3 1.3e-66 223.2 1.7 1.8 2 0 0 2 2 2 1 YhcG PDDEXK nuclease domain DUF1016_N PF17761.1 gi|91773199|ref|YP_565891.1| - 1.2e-43 148.5 6.5 2e-43 147.8 6.5 1.3 1 0 0 1 1 1 1 DUF1016 N-terminal domain Alpha-L-AF_C PF06964.12 gi|91773199|ref|YP_565891.1| - 0.15 12.2 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Alpha-L-arabinofuranosidase C-terminal domain Phage_pRha PF09669.10 gi|91773200|ref|YP_565892.1| - 0.00014 22.3 0.2 0.00035 21.1 0.0 1.7 2 0 0 2 2 2 1 Phage regulatory protein Rha (Phage_pRha) ORF6N PF10543.9 gi|91773200|ref|YP_565892.1| - 0.0013 18.9 0.4 0.0039 17.4 0.0 1.9 2 1 0 2 2 2 1 ORF6N domain DKNYY PF13644.6 gi|91773200|ref|YP_565892.1| - 0.036 14.9 0.1 0.04 14.7 0.1 1.1 1 0 0 1 1 1 0 DKNYY family Fic_N PF13784.6 gi|91773201|ref|YP_565893.1| - 1.5e-23 82.6 0.0 2.7e-23 81.8 0.0 1.4 1 0 0 1 1 1 1 Fic/DOC family N-terminal Fic PF02661.18 gi|91773201|ref|YP_565893.1| - 4e-15 56.5 0.0 8.2e-15 55.5 0.0 1.6 1 0 0 1 1 1 1 Fic/DOC family Ribosomal_S20p PF01649.18 gi|91773201|ref|YP_565893.1| - 0.033 14.8 0.1 0.11 13.2 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein S20 N6_Mtase PF02384.16 gi|91773202|ref|YP_565894.1| - 8.2e-115 383.3 0.0 1.1e-114 383.0 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|91773202|ref|YP_565894.1| - 1.5e-27 96.8 0.0 4.2e-27 95.4 0.0 1.8 1 0 0 1 1 1 1 HsdM N-terminal domain MTS PF05175.14 gi|91773202|ref|YP_565894.1| - 6.9e-06 25.7 0.0 1.8e-05 24.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 gi|91773202|ref|YP_565894.1| - 0.0083 15.8 0.0 0.029 14.0 0.0 1.9 1 1 0 1 1 1 1 Conserved hypothetical protein 95 UPF0020 PF01170.18 gi|91773202|ref|YP_565894.1| - 0.012 15.3 0.8 0.06 13.0 0.8 2.0 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 AviRa PF11599.8 gi|91773202|ref|YP_565894.1| - 0.022 14.2 0.0 0.039 13.4 0.0 1.3 1 0 0 1 1 1 0 RRNA methyltransferase AviRa DHODB_Fe-S_bind PF10418.9 gi|91773204|ref|YP_565896.1| - 4.2e-11 42.4 9.5 1e-09 38.0 4.2 2.4 2 0 0 2 2 2 2 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.24 gi|91773204|ref|YP_565896.1| - 0.00099 19.4 0.0 0.038 14.4 0.0 2.4 1 1 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 gi|91773204|ref|YP_565896.1| - 0.0043 17.7 0.2 0.017 15.7 0.2 2.0 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain DHO_dh PF01180.21 gi|91773205|ref|YP_565897.1| - 3.9e-68 229.8 0.9 4.4e-68 229.7 0.9 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|91773205|ref|YP_565897.1| - 6e-11 42.0 1.2 2e-05 23.9 0.1 2.2 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|91773205|ref|YP_565897.1| - 3.6e-06 26.6 0.9 5.4e-05 22.8 0.1 2.8 3 0 0 3 3 3 1 Histidine biosynthesis protein NMO PF03060.15 gi|91773205|ref|YP_565897.1| - 1.5e-05 24.5 7.4 0.00013 21.5 7.4 2.5 1 1 0 1 1 1 1 Nitronate monooxygenase DUF561 PF04481.12 gi|91773205|ref|YP_565897.1| - 0.0023 17.2 0.7 0.0051 16.0 0.1 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF561) IMPDH PF00478.25 gi|91773205|ref|YP_565897.1| - 0.0033 16.5 2.0 0.0064 15.5 1.9 1.6 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 gi|91773205|ref|YP_565897.1| - 0.0048 16.1 0.6 0.021 14.0 0.3 2.1 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|91773205|ref|YP_565897.1| - 0.0051 16.2 0.2 0.0051 16.2 0.2 2.4 2 1 1 3 3 3 1 Thiazole biosynthesis protein ThiG G3P_antiterm PF04309.12 gi|91773205|ref|YP_565897.1| - 0.0071 15.8 0.7 0.48 9.8 0.1 2.8 4 0 0 4 4 4 1 Glycerol-3-phosphate responsive antiterminator IGPS PF00218.21 gi|91773205|ref|YP_565897.1| - 0.14 11.3 0.0 0.21 10.7 0.0 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase Porphobil_deam PF01379.20 gi|91773206|ref|YP_565898.1| - 8.2e-72 241.0 0.1 1.1e-71 240.6 0.1 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|91773206|ref|YP_565898.1| - 1.6e-09 38.0 0.1 3.8e-09 36.8 0.1 1.6 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain Aminotran_3 PF00202.21 gi|91773207|ref|YP_565899.1| - 1.2e-65 221.7 0.0 1.6e-65 221.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|91773207|ref|YP_565899.1| - 0.063 12.4 0.0 0.084 12.0 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class I and II ALAD PF00490.21 gi|91773208|ref|YP_565900.1| - 1.2e-144 481.3 0.2 1.3e-144 481.2 0.2 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Mob_Pre PF01076.19 gi|91773208|ref|YP_565900.1| - 0.11 12.4 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Plasmid recombination enzyme Shikimate_DH PF01488.20 gi|91773209|ref|YP_565901.1| - 3.1e-39 134.2 1.8 2.5e-38 131.2 0.2 2.5 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GlutR_N PF05201.15 gi|91773209|ref|YP_565901.1| - 1.3e-36 125.5 0.2 2.6e-36 124.6 0.2 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.20 gi|91773209|ref|YP_565901.1| - 5.4e-21 74.9 1.2 1e-20 73.9 1.2 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.17 gi|91773209|ref|YP_565901.1| - 5.8e-09 36.4 1.3 3.5e-08 33.9 0.0 2.8 4 0 0 4 4 3 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|91773209|ref|YP_565901.1| - 3.1e-06 27.4 0.0 7.2e-06 26.3 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|91773209|ref|YP_565901.1| - 4.9e-06 26.0 0.1 9.4e-06 25.1 0.1 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Glu_dehyd_C PF16912.5 gi|91773209|ref|YP_565901.1| - 0.00014 21.4 0.3 0.00031 20.3 0.3 1.5 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus NAD_binding_7 PF13241.6 gi|91773209|ref|YP_565901.1| - 0.00028 21.3 0.0 0.00089 19.7 0.0 1.8 1 0 0 1 1 1 1 Putative NAD(P)-binding DapB_N PF01113.20 gi|91773209|ref|YP_565901.1| - 0.00029 21.0 0.3 0.00084 19.5 0.0 2.0 2 0 0 2 2 1 1 Dihydrodipicolinate reductase, N-terminus DFP PF04127.15 gi|91773209|ref|YP_565901.1| - 0.0004 20.3 0.5 0.0022 17.9 0.5 2.0 1 1 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein OCD_Mu_crystall PF02423.15 gi|91773209|ref|YP_565901.1| - 0.00041 19.4 0.0 0.0008 18.4 0.0 1.4 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family NAD_binding_10 PF13460.6 gi|91773209|ref|YP_565901.1| - 0.00075 19.4 0.5 0.0039 17.1 0.1 2.2 1 1 0 2 2 2 1 NAD(P)H-binding GFO_IDH_MocA PF01408.22 gi|91773209|ref|YP_565901.1| - 0.0018 19.1 0.2 0.0058 17.5 0.0 2.0 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold THF_DHG_CYH_C PF02882.19 gi|91773209|ref|YP_565901.1| - 0.0024 17.2 0.2 1.3 8.3 0.0 3.2 2 1 1 3 3 3 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Oxidored_nitro PF00148.19 gi|91773209|ref|YP_565901.1| - 0.0069 15.2 0.1 0.017 13.8 0.1 1.6 1 1 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|91773209|ref|YP_565901.1| - 0.01 16.1 0.0 0.01 16.1 0.0 2.9 4 1 0 4 4 4 0 Saccharopine dehydrogenase NADP binding domain IlvN PF07991.12 gi|91773209|ref|YP_565901.1| - 0.025 14.1 0.0 0.1 12.2 0.0 2.0 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain PRESAN PF09687.10 gi|91773209|ref|YP_565901.1| - 0.039 14.5 0.2 0.082 13.5 0.2 1.5 1 0 0 1 1 1 0 Plasmodium RESA N-terminal TrkA_N PF02254.18 gi|91773209|ref|YP_565901.1| - 0.048 13.9 1.4 0.55 10.5 0.1 3.1 2 1 1 3 3 3 0 TrkA-N domain Rimk_N PF18030.1 gi|91773209|ref|YP_565901.1| - 0.057 13.8 0.4 4.3 7.8 0.0 2.7 2 0 0 2 2 2 0 RimK PreATP-grasp domain NAD_binding_7 PF13241.6 gi|91773210|ref|YP_565902.1| - 6.2e-19 68.4 0.0 9.7e-19 67.7 0.0 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding Sirohm_synth_M PF14824.6 gi|91773210|ref|YP_565902.1| - 5.7e-05 22.5 0.1 9.9e-05 21.7 0.1 1.4 1 0 0 1 1 1 1 Sirohaem biosynthesis protein central AlaDh_PNT_C PF01262.21 gi|91773210|ref|YP_565902.1| - 0.0027 17.0 0.0 0.0045 16.3 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 gi|91773210|ref|YP_565902.1| - 0.032 13.8 0.0 0.047 13.3 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|91773210|ref|YP_565902.1| - 0.1 12.9 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain AsnC_trans_reg2 PF17805.1 gi|91773211|ref|YP_565903.1| - 1e-31 108.9 0.0 1.5e-31 108.4 0.0 1.3 1 0 0 1 1 1 1 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|91773211|ref|YP_565903.1| - 2.7e-07 30.3 0.0 5.9e-07 29.2 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|91773211|ref|YP_565903.1| - 0.023 14.3 0.0 3.2 7.4 0.0 2.5 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding DDRGK PF09756.9 gi|91773211|ref|YP_565903.1| - 0.05 13.2 0.0 0.082 12.5 0.0 1.2 1 0 0 1 1 1 0 DDRGK domain HEPN PF05168.14 gi|91773211|ref|YP_565903.1| - 0.092 12.9 0.0 0.28 11.3 0.0 1.7 2 0 0 2 2 2 0 HEPN domain MarR_2 PF12802.7 gi|91773211|ref|YP_565903.1| - 0.16 11.9 0.0 0.8 9.6 0.0 1.9 2 0 0 2 2 2 0 MarR family AsnC_trans_reg2 PF17805.1 gi|91773212|ref|YP_565904.1| - 1.5e-24 86.0 0.0 2.6e-24 85.2 0.0 1.4 1 0 0 1 1 1 1 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|91773212|ref|YP_565904.1| - 1.7e-07 31.0 0.0 3.1e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|91773212|ref|YP_565904.1| - 0.0057 16.2 2.1 0.077 12.6 2.1 2.2 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sulfolobus_pRN PF05584.11 gi|91773212|ref|YP_565904.1| - 0.011 15.8 0.0 0.02 15.0 0.0 1.5 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein AsnC_trans_reg PF01037.21 gi|91773212|ref|YP_565904.1| - 0.024 14.6 0.1 0.048 13.6 0.1 1.5 1 1 0 1 1 1 0 Lrp/AsnC ligand binding domain RuvB_C PF05491.13 gi|91773212|ref|YP_565904.1| - 0.11 12.4 0.1 0.3 11.0 0.0 1.7 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain Radical_SAM PF04055.21 gi|91773213|ref|YP_565905.1| - 1.3e-22 80.9 0.3 6.1e-22 78.8 0.0 2.1 1 1 2 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|91773213|ref|YP_565905.1| - 4.9e-10 39.8 0.0 9.6e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|91773213|ref|YP_565905.1| - 1.4e-08 35.1 2.3 2.8e-08 34.2 2.3 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.6 gi|91773213|ref|YP_565905.1| - 4.5e-07 30.0 0.0 1e-06 28.9 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF5046 PF16465.5 gi|91773213|ref|YP_565905.1| - 0.1 12.1 0.1 0.16 11.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5046) CcmE PF03100.15 gi|91773214|ref|YP_565906.1| - 1.5e-15 57.3 0.0 1.7e-15 57.1 0.0 1.0 1 0 0 1 1 1 1 CcmE DUF4307 PF14155.6 gi|91773214|ref|YP_565906.1| - 0.56 10.1 2.6 10 6.0 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4307) polyprenyl_synt PF00348.17 gi|91773215|ref|YP_565907.1| - 3e-51 173.9 0.1 3.8e-51 173.6 0.1 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase Biopterin_H PF00351.21 gi|91773215|ref|YP_565907.1| - 0.064 12.3 0.0 7 5.6 0.0 2.1 2 0 0 2 2 2 0 Biopterin-dependent aromatic amino acid hydroxylase Peptidase_C47 PF05543.13 gi|91773215|ref|YP_565907.1| - 0.1 12.2 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 Staphopain peptidase C47 Radical_SAM PF04055.21 gi|91773216|ref|YP_565908.1| - 8.1e-15 55.6 0.0 1.3e-14 55.0 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|91773216|ref|YP_565908.1| - 8e-09 35.9 0.0 2.1e-08 34.6 0.0 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Imm51 PF15595.6 gi|91773216|ref|YP_565908.1| - 0.065 13.2 0.4 0.18 11.7 0.0 1.9 2 0 0 2 2 2 0 Immunity protein 51 Fer4_12 PF13353.6 gi|91773216|ref|YP_565908.1| - 0.13 12.5 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain V-ATPase_G_2 PF16999.5 gi|91773217|ref|YP_565909.1| - 5.8e-07 29.9 18.1 7e-07 29.6 18.1 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 gi|91773217|ref|YP_565909.1| - 1.4e-06 28.4 24.6 1.6e-05 25.0 17.9 2.0 1 1 1 2 2 2 2 ATP synthase B/B' CF(0) V-ATPase_G PF03179.15 gi|91773217|ref|YP_565909.1| - 0.042 14.4 17.2 0.06 13.9 17.2 1.3 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit Ribosomal_S20p PF01649.18 gi|91773217|ref|YP_565909.1| - 0.14 12.8 13.0 0.85 10.3 13.0 2.2 1 1 0 1 1 1 0 Ribosomal protein S20 HOIP-UBA PF16678.5 gi|91773217|ref|YP_565909.1| - 0.16 12.0 10.5 0.58 10.2 0.6 2.1 1 1 1 2 2 2 0 HOIP UBA domain pair PIN_8 PF18476.1 gi|91773217|ref|YP_565909.1| - 0.41 10.5 10.4 0.47 10.3 10.4 1.0 1 0 0 1 1 1 0 PIN like domain dsrm PF00035.26 gi|91773217|ref|YP_565909.1| - 0.8 10.5 6.6 9.8 7.0 0.2 2.4 2 0 0 2 2 2 0 Double-stranded RNA binding motif DUF883 PF05957.13 gi|91773217|ref|YP_565909.1| - 0.91 10.2 9.3 2.6 8.7 9.3 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) LMBR1 PF04791.16 gi|91773217|ref|YP_565909.1| - 1.5 7.6 8.3 1.6 7.6 8.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2462 PF09495.10 gi|91773217|ref|YP_565909.1| - 3 8.6 9.6 0.46 11.3 1.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2462) Pro_CA PF00484.19 gi|91773217|ref|YP_565909.1| - 3.3 8.0 7.2 1.2 9.4 3.0 1.8 1 1 1 2 2 2 0 Carbonic anhydrase YtxH PF12732.7 gi|91773217|ref|YP_565909.1| - 3.9 8.1 12.3 0.27 11.8 5.0 2.2 2 1 0 2 2 2 0 YtxH-like protein PRKCSH-like PF12999.7 gi|91773217|ref|YP_565909.1| - 7.4 6.3 9.3 2.6 7.8 3.2 2.0 1 1 1 2 2 2 0 Glucosidase II beta subunit-like V_ATPase_I PF01496.19 gi|91773218|ref|YP_565910.1| - 7.9e-28 96.9 5.6 1.7e-16 59.4 0.1 3.0 3 1 0 3 3 3 2 V-type ATPase 116kDa subunit family V-SNARE PF05008.15 gi|91773218|ref|YP_565910.1| - 0.16 12.4 0.6 0.32 11.4 0.6 1.4 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus DUF2929 PF11151.8 gi|91773218|ref|YP_565910.1| - 2.7 8.4 10.1 1.6 9.1 3.0 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2929) Prefoldin_2 PF01920.20 gi|91773218|ref|YP_565910.1| - 5.4 7.0 7.7 11 6.0 1.3 2.4 2 0 0 2 2 2 0 Prefoldin subunit ATP-synt_C PF00137.21 gi|91773219|ref|YP_565911.1| - 1e-17 64.2 11.0 1e-17 64.2 11.0 1.3 2 0 0 2 2 2 1 ATP synthase subunit C vATP-synt_E PF01991.18 gi|91773220|ref|YP_565912.1| - 2.5e-21 76.0 12.9 1e-19 70.7 12.9 2.0 1 1 0 1 1 1 1 ATP synthase (E/31 kDa) subunit ATP-synt_B PF00430.18 gi|91773220|ref|YP_565912.1| - 0.0068 16.5 6.9 0.012 15.6 6.9 1.5 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) DivIVA PF05103.13 gi|91773220|ref|YP_565912.1| - 0.012 15.7 4.4 0.012 15.7 4.4 1.8 2 1 0 2 2 2 0 DivIVA protein UPF0261 PF06792.11 gi|91773220|ref|YP_565912.1| - 0.039 12.9 0.3 0.055 12.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0261) DUF3552 PF12072.8 gi|91773220|ref|YP_565912.1| - 0.1 12.0 7.8 0.17 11.3 7.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF2856 PF11043.8 gi|91773220|ref|YP_565912.1| - 0.11 12.6 0.1 1 9.5 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2856) Phage_GP20 PF06810.11 gi|91773220|ref|YP_565912.1| - 0.32 10.8 8.1 0.63 9.8 8.1 1.6 1 0 0 1 1 1 0 Phage minor structural protein GP20 vATP-synt_AC39 PF01992.16 gi|91773221|ref|YP_565913.1| - 2.1e-75 254.3 5.8 2.4e-75 254.2 5.8 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit OxoGdeHyase_C PF16870.5 gi|91773221|ref|YP_565913.1| - 0.071 12.8 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 2-oxoglutarate dehydrogenase C-terminal LisH PF08513.11 gi|91773221|ref|YP_565913.1| - 0.12 12.3 0.3 0.42 10.6 0.3 1.9 1 0 0 1 1 1 0 LisH ATP-synt_F PF01990.17 gi|91773222|ref|YP_565914.1| - 1.8e-17 63.4 0.1 2e-17 63.2 0.1 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit YcgL PF05166.13 gi|91773222|ref|YP_565914.1| - 0.00072 19.9 0.0 0.033 14.5 0.0 2.1 1 1 1 2 2 2 2 YcgL domain ATP-synt_ab PF00006.25 gi|91773223|ref|YP_565915.1| - 2.4e-95 318.2 0.0 3.5e-95 317.7 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|91773223|ref|YP_565915.1| - 2.6e-45 153.2 0.1 4.7e-45 152.4 0.1 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|91773223|ref|YP_565915.1| - 1.9e-14 53.9 2.1 1.9e-14 53.9 2.1 2.0 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain RnfC_N PF13375.6 gi|91773223|ref|YP_565915.1| - 0.0031 17.5 1.0 0.029 14.3 0.1 2.3 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain NQRA PF05896.11 gi|91773223|ref|YP_565915.1| - 0.026 14.0 0.1 0.049 13.1 0.1 1.3 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AAA_22 PF13401.6 gi|91773223|ref|YP_565915.1| - 0.026 14.8 0.0 0.056 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Peptidase_M23 PF01551.22 gi|91773223|ref|YP_565915.1| - 0.15 12.3 0.2 12 6.2 0.0 2.6 2 0 0 2 2 2 0 Peptidase family M23 ATP-synt_ab PF00006.25 gi|91773224|ref|YP_565916.1| - 3.8e-64 216.3 0.0 5.2e-64 215.8 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|91773224|ref|YP_565916.1| - 4e-10 40.1 2.2 4e-10 40.1 2.2 1.8 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|91773224|ref|YP_565916.1| - 5.1e-05 23.3 0.8 0.00019 21.5 0.5 2.2 3 0 0 3 3 3 1 HAS barrel domain ATP-synt_D PF01813.17 gi|91773225|ref|YP_565917.1| - 5.1e-54 183.1 8.5 5.8e-54 182.9 8.5 1.0 1 0 0 1 1 1 1 ATP synthase subunit D Ead_Ea22 PF13935.6 gi|91773225|ref|YP_565917.1| - 0.016 15.9 0.2 1.8 9.2 0.0 2.2 2 0 0 2 2 2 0 Ead/Ea22-like protein Arch_fla_DE PF04659.13 gi|91773226|ref|YP_565918.1| - 1.1e-27 95.7 0.2 2.9e-27 94.3 0.2 1.8 1 0 0 1 1 1 1 Archaeal flagella protein CENP-F_leu_zip PF10473.9 gi|91773226|ref|YP_565918.1| - 9.7e-06 25.7 17.9 0.00019 21.4 6.9 2.8 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 gi|91773226|ref|YP_565918.1| - 1.8e-05 24.2 2.6 1.8e-05 24.2 2.6 2.6 2 1 1 3 3 2 1 Growth-arrest specific micro-tubule binding ALIX_LYPXL_bnd PF13949.6 gi|91773226|ref|YP_565918.1| - 0.00012 21.5 14.4 0.00027 20.4 7.6 2.4 1 1 1 2 2 2 1 ALIX V-shaped domain binding to HIV Myosin_tail_1 PF01576.19 gi|91773226|ref|YP_565918.1| - 0.00027 18.9 12.3 0.0004 18.4 12.3 1.2 1 0 0 1 1 1 1 Myosin tail DUF1664 PF07889.12 gi|91773226|ref|YP_565918.1| - 0.00036 20.6 11.4 0.006 16.6 2.3 3.1 2 1 1 3 3 3 2 Protein of unknown function (DUF1664) UPF0242 PF06785.11 gi|91773226|ref|YP_565918.1| - 0.00039 20.6 8.8 0.00039 20.6 8.8 2.6 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus DUF724 PF05266.14 gi|91773226|ref|YP_565918.1| - 0.0021 17.9 13.1 0.02 14.7 2.2 2.7 1 1 1 2 2 2 2 Protein of unknown function (DUF724) ATG16 PF08614.11 gi|91773226|ref|YP_565918.1| - 0.005 17.1 8.2 0.005 17.1 8.2 2.5 1 1 1 2 2 2 1 Autophagy protein 16 (ATG16) BLOC1_2 PF10046.9 gi|91773226|ref|YP_565918.1| - 0.0067 16.7 14.9 0.3 11.4 3.4 4.2 1 1 4 5 5 5 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Nsp1_C PF05064.13 gi|91773226|ref|YP_565918.1| - 0.0077 16.0 1.2 0.0077 16.0 1.2 3.4 1 1 2 3 3 3 1 Nsp1-like C-terminal region FlaC_arch PF05377.11 gi|91773226|ref|YP_565918.1| - 0.011 16.1 1.2 0.011 16.1 1.2 4.6 4 2 0 4 4 3 0 Flagella accessory protein C (FlaC) Atg14 PF10186.9 gi|91773226|ref|YP_565918.1| - 0.015 14.4 10.8 0.031 13.4 10.8 1.5 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3450 PF11932.8 gi|91773226|ref|YP_565918.1| - 0.018 14.3 9.8 0.021 14.1 1.8 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) Uds1 PF15456.6 gi|91773226|ref|YP_565918.1| - 0.022 14.9 2.5 0.022 14.9 2.5 2.4 2 0 0 2 2 2 0 Up-regulated During Septation TACC_C PF05010.14 gi|91773226|ref|YP_565918.1| - 0.027 14.3 11.5 0.025 14.4 9.0 2.2 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Apolipoprotein PF01442.18 gi|91773226|ref|YP_565918.1| - 0.03 14.2 3.0 0.13 12.2 0.3 2.3 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF4164 PF13747.6 gi|91773226|ref|YP_565918.1| - 0.045 14.0 8.0 0.13 12.6 2.0 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) HAUS-augmin3 PF14932.6 gi|91773226|ref|YP_565918.1| - 0.055 13.1 8.1 0.17 11.4 8.1 1.9 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 TPR_MLP1_2 PF07926.12 gi|91773226|ref|YP_565918.1| - 0.059 13.4 14.6 0.32 11.1 0.7 3.5 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein Syntaxin-6_N PF09177.11 gi|91773226|ref|YP_565918.1| - 0.079 13.5 15.0 0.82 10.3 2.4 3.8 1 1 2 3 3 3 0 Syntaxin 6, N-terminal CLZ PF16526.5 gi|91773226|ref|YP_565918.1| - 0.093 13.1 4.9 2.1 8.8 0.1 3.4 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Prefoldin PF02996.17 gi|91773226|ref|YP_565918.1| - 0.15 12.0 14.4 0.31 11.0 0.5 4.2 3 1 0 4 4 3 0 Prefoldin subunit Laminin_II PF06009.12 gi|91773226|ref|YP_565918.1| - 0.27 11.2 16.0 0.72 9.9 4.9 3.5 1 1 2 3 3 3 0 Laminin Domain II Snapin_Pallidin PF14712.6 gi|91773226|ref|YP_565918.1| - 0.3 11.5 13.4 0.04 14.3 2.1 3.8 3 1 0 3 3 2 0 Snapin/Pallidin DUF1515 PF07439.11 gi|91773226|ref|YP_565918.1| - 0.35 10.9 1.3 3 7.9 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1515) TMPIT PF07851.13 gi|91773226|ref|YP_565918.1| - 0.37 10.0 11.3 1.1 8.4 2.3 2.5 1 1 1 2 2 2 0 TMPIT-like protein DUF484 PF04340.12 gi|91773226|ref|YP_565918.1| - 0.43 10.2 2.7 0.89 9.2 2.7 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF484 Cornifin PF02389.15 gi|91773226|ref|YP_565918.1| - 0.52 10.5 6.0 1.1 9.5 6.0 1.5 1 0 0 1 1 1 0 Cornifin (SPRR) family Nup54 PF13874.6 gi|91773226|ref|YP_565918.1| - 0.59 10.2 3.3 1.2 9.3 2.4 2.0 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 TolA_bind_tri PF16331.5 gi|91773226|ref|YP_565918.1| - 0.63 10.2 7.6 1.6 8.9 0.3 3.3 3 0 0 3 3 3 0 TolA binding protein trimerisation DUF4208 PF13907.6 gi|91773226|ref|YP_565918.1| - 0.73 10.3 6.2 0.6 10.6 0.3 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4208) DivIC PF04977.15 gi|91773226|ref|YP_565918.1| - 0.82 9.5 11.1 0.12 12.1 1.0 3.7 1 1 4 5 5 4 0 Septum formation initiator DUF745 PF05335.13 gi|91773226|ref|YP_565918.1| - 0.85 9.3 9.8 0.91 9.2 1.4 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF745) Lectin_N PF03954.14 gi|91773226|ref|YP_565918.1| - 0.94 9.2 9.3 4.5 7.0 0.9 2.6 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Baculo_PEP_C PF04513.12 gi|91773226|ref|YP_565918.1| - 1.2 9.1 16.4 0.56 10.2 9.7 2.8 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Occludin_ELL PF07303.13 gi|91773226|ref|YP_565918.1| - 1.3 9.7 8.9 5.4 7.8 1.2 3.5 2 1 2 4 4 3 0 Occludin homology domain Spc7 PF08317.11 gi|91773226|ref|YP_565918.1| - 1.5 7.7 22.4 0.014 14.3 8.8 2.7 2 1 1 3 3 2 0 Spc7 kinetochore protein PRKG1_interact PF15898.5 gi|91773226|ref|YP_565918.1| - 1.8 9.5 13.0 0.56 11.1 2.2 3.5 2 1 2 4 4 3 0 cGMP-dependent protein kinase interacting domain CENP-H PF05837.12 gi|91773226|ref|YP_565918.1| - 2.8 8.4 12.5 0.33 11.4 3.7 3.1 1 1 2 3 3 3 0 Centromere protein H (CENP-H) APG17 PF04108.12 gi|91773226|ref|YP_565918.1| - 3.1 6.8 19.5 0.31 10.1 5.3 3.4 3 1 1 4 4 3 0 Autophagy protein Apg17 CALCOCO1 PF07888.11 gi|91773226|ref|YP_565918.1| - 3.1 6.6 14.5 4.1 6.2 13.3 1.7 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like APG6_N PF17675.1 gi|91773226|ref|YP_565918.1| - 3.2 8.3 19.2 0.9 10.1 5.8 2.9 1 1 2 3 3 3 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 gi|91773226|ref|YP_565918.1| - 3.4 5.5 13.0 0.64 7.9 8.2 1.5 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Uso1_p115_C PF04871.13 gi|91773226|ref|YP_565918.1| - 3.9 7.9 17.6 0.38 11.1 2.4 3.4 2 1 2 4 4 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region Fez1 PF06818.15 gi|91773226|ref|YP_565918.1| - 4.1 7.8 14.1 4.7 7.6 3.8 2.4 1 1 1 2 2 2 0 Fez1 CHDCT2 PF08074.11 gi|91773226|ref|YP_565918.1| - 4.1 7.5 6.9 1.2 9.3 1.2 2.7 3 0 0 3 3 2 0 CHDCT2 (NUC038) domain Prefoldin_2 PF01920.20 gi|91773226|ref|YP_565918.1| - 4.4 7.3 16.0 0.14 12.1 2.7 4.1 3 1 1 4 4 4 0 Prefoldin subunit Cortex-I_coil PF09304.10 gi|91773226|ref|YP_565918.1| - 4.6 7.5 16.7 5.5 7.3 2.5 3.9 2 1 1 3 3 3 0 Cortexillin I, coiled coil Fib_alpha PF08702.10 gi|91773226|ref|YP_565918.1| - 5 7.3 20.0 0.55 10.4 7.9 3.2 2 1 1 3 3 2 0 Fibrinogen alpha/beta chain family ACCA PF03255.14 gi|91773226|ref|YP_565918.1| - 6 6.7 8.1 0.71 9.7 1.0 2.9 1 1 2 3 3 3 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CREPT PF16566.5 gi|91773226|ref|YP_565918.1| - 6 7.0 11.3 1.3 9.2 1.6 3.2 3 0 0 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour DASH_Dad4 PF08650.10 gi|91773226|ref|YP_565918.1| - 8.9 6.4 9.2 53 3.9 3.8 4.1 2 1 1 3 3 3 0 DASH complex subunit Dad4 Jnk-SapK_ap_N PF09744.9 gi|91773226|ref|YP_565918.1| - 9.3 6.5 15.9 0.92 9.7 4.6 2.5 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 Rootletin PF15035.6 gi|91773226|ref|YP_565918.1| - 9.5 6.2 12.5 4.8 7.2 7.7 2.2 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion RasGAP_C PF03836.15 gi|91773226|ref|YP_565918.1| - 9.9 6.3 12.0 1.1e+02 3.0 12.0 2.5 1 1 0 1 1 1 0 RasGAP C-terminus HATPase_c PF02518.26 gi|91773227|ref|YP_565919.1| - 7.3e-25 87.7 0.1 1.9e-24 86.3 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91773227|ref|YP_565919.1| - 2.6e-13 49.8 0.1 5e-13 48.9 0.1 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 gi|91773227|ref|YP_565919.1| - 6e-10 39.3 1.1 9.3e-09 35.5 0.1 2.9 3 0 0 3 3 3 1 PAS domain GAF PF01590.26 gi|91773227|ref|YP_565919.1| - 7.6e-10 39.5 0.0 1.3e-09 38.7 0.0 1.4 1 0 0 1 1 1 1 GAF domain PAS PF00989.25 gi|91773227|ref|YP_565919.1| - 6.8e-09 35.7 0.0 2e-08 34.2 0.0 1.8 2 0 0 2 2 2 1 PAS fold GAF_2 PF13185.6 gi|91773227|ref|YP_565919.1| - 4.6e-06 27.0 0.0 8.3e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 GAF domain PAS_8 PF13188.7 gi|91773227|ref|YP_565919.1| - 1.3e-05 25.0 0.0 3.2e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_3 PF08447.12 gi|91773227|ref|YP_565919.1| - 2.7e-05 24.4 0.0 5.9e-05 23.3 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|91773227|ref|YP_565919.1| - 0.016 15.4 0.0 0.037 14.3 0.0 1.6 1 0 0 1 1 1 0 PAS fold HATPase_c_5 PF14501.6 gi|91773227|ref|YP_565919.1| - 0.022 14.7 0.0 0.056 13.4 0.0 1.7 1 0 0 1 1 1 0 GHKL domain PAS_11 PF14598.6 gi|91773227|ref|YP_565919.1| - 0.031 14.4 0.0 0.076 13.1 0.0 1.6 1 0 0 1 1 1 0 PAS domain GAF_3 PF13492.6 gi|91773227|ref|YP_565919.1| - 0.041 14.2 0.0 0.14 12.5 0.0 1.9 2 0 0 2 2 2 0 GAF domain HATPase_c_2 PF13581.6 gi|91773227|ref|YP_565919.1| - 0.063 13.2 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain PAS_12 PF18095.1 gi|91773227|ref|YP_565919.1| - 0.071 12.8 0.4 0.16 11.6 0.0 1.7 2 0 0 2 2 2 0 UPF0242 C-terminal PAS-like domain PAS_8 PF13188.7 gi|91773228|ref|YP_565920.1| - 1.9e-05 24.5 0.2 7.1e-05 22.7 0.2 1.8 1 1 0 1 1 1 1 PAS domain PAS_9 PF13426.7 gi|91773228|ref|YP_565920.1| - 9.2e-05 22.7 0.0 0.00019 21.6 0.0 1.5 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 gi|91773228|ref|YP_565920.1| - 0.0019 18.2 0.0 0.0021 18.0 0.0 1.1 1 0 0 1 1 1 1 PAS fold GPDPase_memb PF10110.9 gi|91773229|ref|YP_565921.1| - 1.2e-08 34.2 14.9 1e-07 31.1 7.7 2.1 1 1 1 2 2 2 2 Membrane domain of glycerophosphoryl diester phosphodiesterase UPF0259 PF06790.11 gi|91773229|ref|YP_565921.1| - 0.00024 21.0 15.8 0.00024 21.0 15.8 2.4 1 1 0 2 2 2 1 Uncharacterised protein family (UPF0259) DUF975 PF06161.11 gi|91773229|ref|YP_565921.1| - 0.0012 18.7 18.4 0.0042 16.9 18.5 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF975) CitMHS PF03600.16 gi|91773229|ref|YP_565921.1| - 0.029 13.6 13.2 0.043 13.0 13.2 1.2 1 0 0 1 1 1 0 Citrate transporter DUF624 PF04854.14 gi|91773229|ref|YP_565921.1| - 0.087 12.9 10.4 0.95 9.6 2.7 3.4 1 1 2 3 3 3 0 Protein of unknown function, DUF624 MS_channel PF00924.18 gi|91773230|ref|YP_565922.1| - 1.6e-47 161.8 2.2 1.6e-47 161.8 2.2 2.2 3 0 0 3 3 3 1 Mechanosensitive ion channel EbsA PF17255.2 gi|91773230|ref|YP_565922.1| - 0.017 15.4 1.7 0.017 15.4 1.7 2.4 3 0 0 3 3 3 0 EbsA-like protein DUF1899 PF08953.11 gi|91773231|ref|YP_565923.1| - 0.029 14.3 0.2 0.18 11.7 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF1899) DNA_pol3_theta PF06440.11 gi|91773231|ref|YP_565923.1| - 0.08 12.6 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase III, theta subunit COX7a PF02238.15 gi|91773232|ref|YP_565924.1| - 0.12 12.7 0.1 0.67 10.4 0.0 1.9 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII ABC_tran PF00005.27 gi|91773233|ref|YP_565925.1| - 0.00014 22.4 0.1 0.00015 22.3 0.1 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 gi|91773233|ref|YP_565925.1| - 0.0069 16.1 0.1 0.0079 15.9 0.1 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|91773233|ref|YP_565925.1| - 0.038 14.5 0.1 0.045 14.2 0.1 1.1 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|91773233|ref|YP_565925.1| - 0.066 13.1 0.0 0.066 13.1 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase APS_kinase PF01583.20 gi|91773233|ref|YP_565925.1| - 0.07 13.0 0.0 0.11 12.4 0.0 1.4 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_16 PF13191.6 gi|91773233|ref|YP_565925.1| - 0.098 13.0 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|91773233|ref|YP_565925.1| - 0.16 12.2 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain Peptidase_M48 PF01435.18 gi|91773234|ref|YP_565926.1| - 2.3e-39 135.2 0.2 4e-39 134.4 0.0 1.5 2 0 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|91773234|ref|YP_565926.1| - 4.8e-07 29.3 0.2 1.5e-05 24.4 0.0 2.2 2 0 0 2 2 2 1 BlaR1 peptidase M56 PhoR PF11808.8 gi|91773234|ref|YP_565926.1| - 0.029 14.8 3.4 0.029 14.8 3.4 2.0 2 0 0 2 2 2 0 Phosphate regulon sensor protein PhoR Sugarporin_N PF11471.8 gi|91773234|ref|YP_565926.1| - 0.16 11.9 0.6 0.57 10.2 0.0 2.2 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension DUF4157 PF13699.6 gi|91773234|ref|YP_565926.1| - 0.17 12.1 0.1 0.32 11.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) DUF1129 PF06570.11 gi|91773234|ref|YP_565926.1| - 0.9 9.0 7.9 2.1 7.8 0.5 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1129) HeLo PF14479.6 gi|91773235|ref|YP_565927.1| - 0.016 15.0 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Prion-inhibition and propagation PspA_IM30 PF04012.12 gi|91773237|ref|YP_565929.1| - 7.8e-24 84.5 22.9 8.8e-24 84.3 22.9 1.0 1 0 0 1 1 1 1 PspA/IM30 family Flagellin_C PF00700.21 gi|91773237|ref|YP_565929.1| - 5.5e-05 23.4 8.5 0.039 14.3 0.6 3.4 2 1 1 3 3 3 2 Bacterial flagellin C-terminal helical region DUF1664 PF07889.12 gi|91773237|ref|YP_565929.1| - 0.0093 16.0 11.4 0.12 12.4 3.3 3.0 1 1 2 3 3 3 2 Protein of unknown function (DUF1664) DUF5082 PF16888.5 gi|91773237|ref|YP_565929.1| - 0.032 14.5 10.5 0.71 10.2 3.3 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) NOG1 PF06858.14 gi|91773237|ref|YP_565929.1| - 0.046 13.5 0.0 0.24 11.2 0.0 2.2 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) YabA PF06156.13 gi|91773237|ref|YP_565929.1| - 0.13 12.9 8.4 3.3 8.4 0.5 3.1 1 1 2 3 3 3 0 Initiation control protein YabA Baculo_PEP_C PF04513.12 gi|91773237|ref|YP_565929.1| - 0.14 12.2 6.0 13 5.9 3.4 3.0 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Spc7 PF08317.11 gi|91773237|ref|YP_565929.1| - 0.76 8.6 17.4 0.27 10.0 7.1 2.3 1 1 1 2 2 2 0 Spc7 kinetochore protein DivIC PF04977.15 gi|91773237|ref|YP_565929.1| - 1.7 8.5 15.4 0.66 9.8 2.1 3.7 4 0 0 4 4 4 0 Septum formation initiator SHE3 PF17078.5 gi|91773237|ref|YP_565929.1| - 1.7 8.3 11.2 2.1 8.0 6.9 2.8 1 1 1 2 2 2 0 SWI5-dependent HO expression protein 3 MbeD_MobD PF04899.12 gi|91773237|ref|YP_565929.1| - 2.6 8.2 6.7 1.9 8.7 0.1 3.1 2 1 1 3 3 3 0 MbeD/MobD like V_ATPase_I PF01496.19 gi|91773237|ref|YP_565929.1| - 2.6 5.9 8.6 3 5.6 0.5 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family FlxA PF14282.6 gi|91773237|ref|YP_565929.1| - 3.2 7.8 14.1 0.77 9.8 9.1 2.5 2 1 1 3 3 3 0 FlxA-like protein DUF724 PF05266.14 gi|91773237|ref|YP_565929.1| - 4.4 7.1 12.7 8.2 6.2 0.6 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) CCDC-167 PF15188.6 gi|91773237|ref|YP_565929.1| - 4.7 7.6 9.7 3.5 8.0 0.4 3.2 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 CLZ PF16526.5 gi|91773237|ref|YP_565929.1| - 6.2 7.3 14.7 0.19 12.1 1.5 4.1 2 2 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels APG6_N PF17675.1 gi|91773237|ref|YP_565929.1| - 8.1 7.0 21.0 0.44 11.1 9.5 3.2 1 1 1 2 2 2 0 Apg6 coiled-coil region Osmo_CC PF08946.10 gi|91773237|ref|YP_565929.1| - 8.2 6.8 10.1 16 5.8 0.4 4.6 4 2 0 4 4 4 0 Osmosensory transporter coiled coil AAA_27 PF13514.6 gi|91773238|ref|YP_565930.1| - 6e-21 75.0 0.2 4.3e-20 72.2 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|91773238|ref|YP_565930.1| - 4.7e-15 56.6 4.8 4.7e-15 56.6 4.8 6.7 3 2 0 3 3 3 1 AAA domain EELM2 PF15863.5 gi|91773238|ref|YP_565930.1| - 0.0094 16.1 0.0 0.028 14.5 0.0 1.8 1 0 0 1 1 1 1 Extended EGL-27 and MTA1 homology domain AAA_29 PF13555.6 gi|91773238|ref|YP_565930.1| - 0.022 14.5 0.0 0.051 13.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF3040 PF11239.8 gi|91773238|ref|YP_565930.1| - 0.16 12.3 0.2 0.33 11.3 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) SMC_N PF02463.19 gi|91773238|ref|YP_565930.1| - 0.28 10.6 18.3 1.3 8.4 0.1 2.5 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 gi|91773238|ref|YP_565930.1| - 0.96 10.0 0.0 0.96 10.0 0.0 4.0 3 2 0 3 3 3 0 ABC transporter BORCS7 PF16088.5 gi|91773238|ref|YP_565930.1| - 2.6 8.3 17.0 2 8.7 0.3 4.3 4 0 0 4 4 4 0 BLOC-1-related complex sub-unit 7 STAT_alpha PF01017.20 gi|91773238|ref|YP_565930.1| - 4.7 7.1 26.5 0.8 9.6 0.1 5.8 4 2 2 6 6 6 0 STAT protein, all-alpha domain Plasmid_RAQPRD PF09686.10 gi|91773238|ref|YP_565930.1| - 5.3 7.3 5.6 4.1 7.7 0.1 3.7 4 0 0 4 4 4 0 Plasmid protein of unknown function (Plasmid_RAQPRD) Metallophos PF00149.28 gi|91773239|ref|YP_565931.1| - 2e-14 54.6 0.3 3.2e-14 53.9 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|91773239|ref|YP_565931.1| - 7.4e-06 26.3 0.0 1.1e-05 25.7 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Lactamase_B_2 PF12706.7 gi|91773240|ref|YP_565932.1| - 1.3e-06 28.1 0.2 1.8e-06 27.6 0.2 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|91773240|ref|YP_565932.1| - 0.046 13.7 1.2 0.068 13.2 1.2 1.3 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|91773240|ref|YP_565932.1| - 0.085 12.7 0.1 0.085 12.7 0.1 1.2 1 1 0 1 1 1 0 Beta-lactamase superfamily domain DUF98 PF01947.16 gi|91773241|ref|YP_565933.1| - 1.8e-16 60.4 0.0 2.7e-16 59.9 0.0 1.1 1 0 0 1 1 1 1 p-hydroxybenzoic acid synthase Chor_lyase PF04345.13 gi|91773241|ref|YP_565933.1| - 0.0073 16.0 0.0 0.0093 15.6 0.0 1.1 1 0 0 1 1 1 1 Chorismate lyase UTRA PF07702.13 gi|91773241|ref|YP_565933.1| - 0.015 15.1 0.0 0.028 14.3 0.0 1.5 1 1 0 1 1 1 0 UTRA domain DUF5611 PF18446.1 gi|91773242|ref|YP_565934.1| - 3.3e-33 114.6 0.1 3.7e-33 114.5 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5611) HATPase_c PF02518.26 gi|91773243|ref|YP_565935.1| - 1.7e-18 67.2 0.0 3.9e-18 66.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|91773243|ref|YP_565935.1| - 1.1e-12 48.1 0.1 1e-08 35.4 0.0 3.0 3 0 0 3 3 3 2 PAS domain PAS_8 PF13188.7 gi|91773243|ref|YP_565935.1| - 7.4e-11 41.8 0.1 1.1e-07 31.7 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|91773243|ref|YP_565935.1| - 1e-08 35.4 0.0 0.0011 19.2 0.0 3.1 2 2 0 2 2 2 2 PAS fold PAS PF00989.25 gi|91773243|ref|YP_565935.1| - 1.7e-06 28.0 0.0 6.7e-05 22.9 0.0 3.0 2 1 0 2 2 2 1 PAS fold HisKA PF00512.25 gi|91773243|ref|YP_565935.1| - 0.00013 22.0 0.1 0.0015 18.5 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_7 PF12860.7 gi|91773243|ref|YP_565935.1| - 0.00017 21.7 0.0 0.026 14.7 0.0 3.2 2 2 0 2 2 2 1 PAS fold DDE_Tnp_ISL3 PF01610.17 gi|91773243|ref|YP_565935.1| - 0.00096 18.9 0.0 0.0015 18.3 0.0 1.2 1 0 0 1 1 1 1 Transposase Radical_SAM PF04055.21 gi|91773244|ref|YP_565936.1| - 7.2e-10 39.5 0.0 9.8e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|91773244|ref|YP_565936.1| - 2.4e-05 24.6 0.0 3.8e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|91773244|ref|YP_565936.1| - 0.00039 20.5 0.7 0.0007 19.7 0.6 1.6 1 1 0 1 1 1 1 4Fe-4S single cluster domain AIRS PF00586.24 gi|91773246|ref|YP_565938.1| - 2.4e-17 63.4 1.4 5e-17 62.3 1.4 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|91773246|ref|YP_565938.1| - 7.4e-15 55.4 0.0 1.3e-14 54.7 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Radical_SAM PF04055.21 gi|91773247|ref|YP_565939.1| - 1e-25 91.0 0.1 1.7e-25 90.3 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|91773247|ref|YP_565939.1| - 2.1e-06 27.9 0.0 6.6e-06 26.3 0.0 1.8 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|91773247|ref|YP_565939.1| - 0.0015 18.8 0.0 0.0032 17.7 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain TFIIB PF00382.19 gi|91773247|ref|YP_565939.1| - 0.034 14.2 0.0 0.068 13.2 0.0 1.5 1 0 0 1 1 1 0 Transcription factor TFIIB repeat PTPS PF01242.19 gi|91773248|ref|YP_565940.1| - 7.3e-29 100.2 0.1 9e-29 99.9 0.1 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Radical_SAM PF04055.21 gi|91773249|ref|YP_565941.1| - 1.7e-10 41.5 0.3 3.2e-10 40.7 0.3 1.5 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|91773249|ref|YP_565941.1| - 1.6e-07 31.5 0.0 3.3e-07 30.5 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|91773249|ref|YP_565941.1| - 1.8e-06 28.2 0.1 6.9e-06 26.4 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain DUF366 PF04017.12 gi|91773250|ref|YP_565942.1| - 4e-71 238.3 3.1 4.5e-71 238.1 3.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) QueC PF06508.13 gi|91773251|ref|YP_565943.1| - 2.8e-62 210.0 0.0 3.2e-62 209.8 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 gi|91773251|ref|YP_565943.1| - 6.8e-05 22.5 0.1 0.0091 15.6 0.0 2.6 2 1 0 2 2 2 2 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 gi|91773251|ref|YP_565943.1| - 0.00062 19.5 0.0 0.0011 18.7 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase Diphthami_syn_2 PF01902.17 gi|91773251|ref|YP_565943.1| - 0.1 12.1 0.5 3.3 7.1 0.0 2.8 2 2 2 4 4 4 0 Diphthamide synthase tRNA_Me_trans PF03054.16 gi|91773251|ref|YP_565943.1| - 0.12 11.2 0.0 0.17 10.7 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase PKD PF00801.20 gi|91773252|ref|YP_565944.1| - 1e-16 60.5 8.2 3.4e-10 39.6 0.3 2.3 2 0 0 2 2 2 2 PKD domain PKD_3 PF16820.5 gi|91773252|ref|YP_565944.1| - 7.5e-06 25.6 0.3 0.032 14.0 0.0 2.5 2 0 0 2 2 2 2 PKD-like domain Dockerin_1 PF00404.18 gi|91773252|ref|YP_565944.1| - 0.061 13.5 1.1 0.9 9.8 0.1 2.6 2 0 0 2 2 2 0 Dockerin type I domain FmrO PF07091.11 gi|91773252|ref|YP_565944.1| - 0.085 12.4 0.2 1.4 8.4 0.1 2.0 1 1 1 2 2 2 0 Ribosomal RNA methyltransferase (FmrO) He_PIG PF05345.12 gi|91773252|ref|YP_565944.1| - 0.62 10.3 0.1 0.62 10.3 0.1 4.2 3 1 0 3 3 3 0 Putative Ig domain OCD_Mu_crystall PF02423.15 gi|91773253|ref|YP_565945.1| - 4.3e-114 380.7 0.8 5.2e-114 380.5 0.8 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|91773253|ref|YP_565945.1| - 0.00027 21.0 0.0 0.00055 20.0 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|91773253|ref|YP_565945.1| - 0.055 14.1 0.0 0.13 12.9 0.0 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent RimK PF08443.11 gi|91773255|ref|YP_565947.1| - 2.5e-26 92.4 0.1 4.7e-26 91.6 0.1 1.4 1 1 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|91773255|ref|YP_565947.1| - 1.7e-15 56.9 0.1 4.2e-15 55.6 0.1 1.5 1 1 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|91773255|ref|YP_565947.1| - 1.5e-08 34.2 0.0 5.8e-08 32.3 0.0 1.8 2 1 0 2 2 2 1 YheC/D like ATP-grasp Rimk_N PF18030.1 gi|91773255|ref|YP_565947.1| - 6.4e-08 32.9 0.0 1.1e-07 32.1 0.0 1.4 1 0 0 1 1 1 1 RimK PreATP-grasp domain ATPgrasp_ST PF14397.6 gi|91773255|ref|YP_565947.1| - 2.6e-05 23.6 0.1 0.00015 21.1 0.1 2.2 2 1 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|91773255|ref|YP_565947.1| - 0.003 17.6 0.0 0.013 15.5 0.0 2.0 1 1 0 1 1 1 1 ATP-grasp domain PTH2 PF01981.16 gi|91773256|ref|YP_565948.1| - 2.8e-39 134.0 0.1 3.1e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 DUF772 PF05598.11 gi|91773257|ref|YP_565949.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91773257|ref|YP_565949.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91773257|ref|YP_565949.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91773257|ref|YP_565949.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91773257|ref|YP_565949.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease TruD PF01142.18 gi|91773258|ref|YP_565950.1| - 1.6e-165 551.0 0.1 1.8e-165 550.8 0.1 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) CTP_synth_N PF06418.14 gi|91773259|ref|YP_565951.1| - 1.4e-124 414.7 0.9 1.9e-124 414.3 0.9 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|91773259|ref|YP_565951.1| - 8e-56 188.8 0.0 1.5e-55 187.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CbiA PF01656.23 gi|91773259|ref|YP_565951.1| - 8.5e-05 22.6 0.0 0.00036 20.6 0.0 2.1 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Peptidase_C26 PF07722.13 gi|91773259|ref|YP_565951.1| - 0.00049 19.9 0.0 0.0033 17.2 0.0 2.2 1 1 0 1 1 1 1 Peptidase C26 MeaB PF03308.16 gi|91773259|ref|YP_565951.1| - 0.085 11.8 0.2 0.2 10.6 0.2 1.6 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_31 PF13614.6 gi|91773259|ref|YP_565951.1| - 0.12 12.3 0.1 0.33 10.8 0.1 1.8 1 0 0 1 1 1 0 AAA domain MIG-14_Wnt-bd PF06664.12 gi|91773260|ref|YP_565952.1| - 0.015 14.5 5.7 0.02 14.1 5.7 1.1 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion DUF4349 PF14257.6 gi|91773260|ref|YP_565952.1| - 0.14 11.6 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Vma12 PF11712.8 gi|91773260|ref|YP_565952.1| - 0.14 12.2 1.0 0.22 11.6 1.0 1.3 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Trm112p PF03966.16 gi|91773261|ref|YP_565953.1| - 1.2e-11 45.0 0.9 2.3e-11 44.1 0.9 1.5 1 1 0 1 1 1 1 Trm112p-like protein Lar_restr_allev PF14354.6 gi|91773261|ref|YP_565953.1| - 0.0022 18.3 0.1 0.0025 18.2 0.1 1.1 1 0 0 1 1 1 1 Restriction alleviation protein Lar Elf1 PF05129.13 gi|91773261|ref|YP_565953.1| - 0.0022 18.0 0.0 0.0023 17.9 0.0 1.1 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like zf-RRPl_C4 PF17026.5 gi|91773261|ref|YP_565953.1| - 0.016 15.3 0.8 0.031 14.4 0.8 1.6 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type zf_UBZ PF18439.1 gi|91773261|ref|YP_565953.1| - 0.03 13.9 0.7 0.15 11.7 0.0 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Cys_rich_KTR PF14205.6 gi|91773261|ref|YP_565953.1| - 0.032 14.0 1.6 0.072 12.9 1.6 1.6 1 1 0 1 1 1 0 Cysteine-rich KTR zf-ribbon_3 PF13248.6 gi|91773261|ref|YP_565953.1| - 0.054 12.9 1.8 2.4 7.7 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Prim_Zn_Ribbon PF08273.12 gi|91773261|ref|YP_565953.1| - 0.087 13.1 0.9 0.22 11.8 0.9 1.6 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase A2L_zn_ribbon PF08792.10 gi|91773261|ref|YP_565953.1| - 0.094 12.5 2.2 1.7 8.5 2.2 2.1 1 1 0 1 1 1 0 A2L zinc ribbon domain CK_II_beta PF01214.18 gi|91773261|ref|YP_565953.1| - 0.11 12.3 0.2 0.11 12.3 0.2 1.0 1 0 0 1 1 1 0 Casein kinase II regulatory subunit TF_Zn_Ribbon PF08271.12 gi|91773261|ref|YP_565953.1| - 0.13 11.8 2.8 0.4 10.2 2.8 1.8 1 1 0 1 1 1 0 TFIIB zinc-binding Gate PF07670.14 gi|91773262|ref|YP_565954.1| - 3.5e-07 30.5 12.6 0.0001 22.5 3.3 3.1 1 1 1 2 2 2 2 Nucleoside recognition FpoO PF10621.9 gi|91773263|ref|YP_565955.1| - 1.2e-53 180.1 3.5 1.4e-53 179.9 3.5 1.0 1 0 0 1 1 1 1 F420H2 dehydrogenase subunit FpoO DZR PF12773.7 gi|91773263|ref|YP_565955.1| - 0.6 10.2 6.7 4.4 7.4 2.6 2.9 1 1 1 2 2 2 0 Double zinc ribbon DUF4428 PF14471.6 gi|91773263|ref|YP_565955.1| - 1.3 9.0 11.1 0.28 11.1 2.0 3.3 3 1 0 3 3 3 0 Domain of unknown function (DUF4428) Proton_antipo_M PF00361.20 gi|91773264|ref|YP_565956.1| - 1.2e-74 251.1 30.1 1.2e-74 251.1 30.1 2.1 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|91773264|ref|YP_565956.1| - 0.0076 16.3 1.8 0.088 12.9 1.8 3.0 1 0 0 1 1 1 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF4739 PF15893.5 gi|91773264|ref|YP_565956.1| - 0.16 11.5 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4739) DUF962 PF06127.11 gi|91773264|ref|YP_565956.1| - 6.3 7.0 8.4 0.56 10.3 1.0 3.3 2 2 0 2 2 2 0 Protein of unknown function (DUF962) Proton_antipo_M PF00361.20 gi|91773265|ref|YP_565957.1| - 1.5e-69 234.5 33.7 1.5e-69 234.5 33.7 1.8 2 1 1 3 3 3 1 Proton-conducting membrane transporter DUF3343 PF11823.8 gi|91773265|ref|YP_565957.1| - 0.15 11.5 0.1 0.3 10.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) Proton_antipo_M PF00361.20 gi|91773266|ref|YP_565958.1| - 1.5e-72 244.3 23.6 1.5e-72 244.3 23.6 2.0 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|91773266|ref|YP_565958.1| - 3.9e-18 65.3 0.5 3.9e-18 65.3 0.5 4.0 5 0 0 5 5 5 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_C PF01010.19 gi|91773266|ref|YP_565958.1| - 0.054 13.1 5.8 0.45 10.1 4.2 2.9 1 1 1 2 2 2 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Oxidored_q2 PF00420.24 gi|91773267|ref|YP_565959.1| - 2.8e-26 91.2 4.8 3e-26 91.1 4.8 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BMC PF00936.19 gi|91773267|ref|YP_565959.1| - 0.086 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 BMC domain Fer4 PF00037.27 gi|91773268|ref|YP_565960.1| - 1.1e-15 56.6 11.2 2.3e-08 33.5 2.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91773268|ref|YP_565960.1| - 5.6e-12 46.1 8.0 7.9e-12 45.6 8.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91773268|ref|YP_565960.1| - 2.1e-11 43.8 17.6 7.7e-09 35.6 8.3 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91773268|ref|YP_565960.1| - 2e-09 38.3 5.0 0.0004 21.3 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|91773268|ref|YP_565960.1| - 3.7e-09 36.6 7.5 5.6e-09 36.0 7.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91773268|ref|YP_565960.1| - 1.2e-08 34.9 10.1 2.9e-08 33.7 10.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773268|ref|YP_565960.1| - 2.2e-07 30.5 9.0 6.2e-05 22.9 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91773268|ref|YP_565960.1| - 2.7e-07 30.9 7.7 3.6e-05 24.1 10.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773268|ref|YP_565960.1| - 1.1e-05 25.2 13.7 0.00011 22.1 4.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|91773268|ref|YP_565960.1| - 3.6e-05 23.9 9.6 0.0026 18.1 1.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91773268|ref|YP_565960.1| - 4e-05 24.1 10.0 0.0025 18.3 10.9 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91773268|ref|YP_565960.1| - 4.1e-05 24.2 6.1 0.0086 16.8 0.4 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|91773268|ref|YP_565960.1| - 5.3e-05 24.0 7.6 0.014 16.2 1.5 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773268|ref|YP_565960.1| - 0.001 19.6 12.1 0.0019 18.7 2.4 2.3 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|91773268|ref|YP_565960.1| - 0.002 18.9 15.8 0.05 14.6 3.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91773268|ref|YP_565960.1| - 0.12 12.6 9.5 11 6.2 9.5 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain TRSP PF12500.8 gi|91773268|ref|YP_565960.1| - 0.14 12.1 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 TRSP domain C terminus to PRTase_2 NADHdh PF00146.21 gi|91773269|ref|YP_565961.1| - 7.5e-106 353.8 22.4 8.9e-106 353.5 22.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase V_ATPase_I PF01496.19 gi|91773269|ref|YP_565961.1| - 1.8 6.4 3.2 2.6 5.8 3.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Complex1_49kDa PF00346.19 gi|91773270|ref|YP_565962.1| - 6.3e-85 284.5 0.1 4.3e-83 278.5 0.1 2.1 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|91773270|ref|YP_565962.1| - 1.9e-07 30.4 0.0 2.4e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Nickel-dependent hydrogenase Complex1_30kDa PF00329.19 gi|91773271|ref|YP_565963.1| - 1.1e-36 126.1 0.1 1.5e-36 125.7 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RNase_H_2 PF13482.6 gi|91773271|ref|YP_565963.1| - 0.032 14.2 0.0 0.04 13.9 0.0 1.1 1 0 0 1 1 1 0 RNase_H superfamily Oxidored_q6 PF01058.22 gi|91773272|ref|YP_565964.1| - 3.9e-21 75.2 0.1 5.8e-21 74.7 0.1 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Oxidored_q4 PF00507.19 gi|91773273|ref|YP_565965.1| - 6.8e-36 122.4 1.8 6.8e-36 122.4 1.8 1.5 2 0 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Foamy_BEL PF03274.14 gi|91773273|ref|YP_565965.1| - 0.18 11.1 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 Foamy virus BEL 1/2 protein DZR PF12773.7 gi|91773274|ref|YP_565966.1| - 0.011 15.8 4.2 0.11 12.6 0.2 2.7 2 1 1 3 3 3 0 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|91773274|ref|YP_565966.1| - 0.015 14.8 13.2 0.35 10.4 2.3 3.0 2 1 0 2 2 2 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|91773274|ref|YP_565966.1| - 0.017 14.5 10.1 0.66 9.5 0.2 3.9 4 0 0 4 4 4 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|91773274|ref|YP_565966.1| - 0.039 13.7 0.6 11 5.8 0.0 3.0 3 0 0 3 3 3 0 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|91773274|ref|YP_565966.1| - 0.098 13.1 0.9 0.098 13.1 0.9 2.4 2 0 0 2 2 2 0 Restriction alleviation protein Lar zf-IS66 PF13005.7 gi|91773274|ref|YP_565966.1| - 0.1 13.0 1.1 2.1 8.8 0.2 2.7 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 eIF-5_eIF-2B PF01873.17 gi|91773274|ref|YP_565966.1| - 0.11 12.3 2.0 0.18 11.7 0.3 2.2 2 0 0 2 2 2 0 Domain found in IF2B/IF5 zf-CHY PF05495.12 gi|91773274|ref|YP_565966.1| - 0.21 12.1 8.8 0.39 11.2 1.4 2.6 2 1 0 2 2 2 0 CHY zinc finger zf-ACC PF17848.1 gi|91773274|ref|YP_565966.1| - 0.22 11.6 12.0 1.3 9.2 0.2 3.6 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain DUF35_N PF12172.8 gi|91773274|ref|YP_565966.1| - 0.29 11.1 2.4 9.7 6.2 0.0 2.9 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_15 PF17032.5 gi|91773274|ref|YP_565966.1| - 0.5 11.2 6.6 1.6 9.6 0.8 2.7 2 1 0 2 2 2 0 zinc-ribbon family RecO_C PF02565.15 gi|91773274|ref|YP_565966.1| - 1.7 8.4 3.2 7.9 6.3 0.1 2.7 2 1 1 3 3 3 0 Recombination protein O C terminal zf-C2HC5 PF06221.13 gi|91773274|ref|YP_565966.1| - 2.7 8.1 7.9 7.4 6.7 0.0 3.5 3 1 0 3 3 3 0 Putative zinc finger motif, C2HC5-type Prok-RING_2 PF14445.6 gi|91773274|ref|YP_565966.1| - 3.4 7.9 12.3 0.54 10.5 0.7 3.3 4 0 0 4 4 4 0 Prokaryotic RING finger family 2 C1_1 PF00130.22 gi|91773274|ref|YP_565966.1| - 5.1 7.1 8.4 0.8 9.6 0.9 2.6 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF22 PF01629.16 gi|91773275|ref|YP_565967.1| - 1.9e-37 127.1 0.3 3e-37 126.6 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF22 Fer4 PF00037.27 gi|91773276|ref|YP_565968.1| - 8.5e-12 44.4 16.4 1.1e-06 28.2 4.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|91773276|ref|YP_565968.1| - 1.3e-08 34.7 12.7 2.1e-05 24.6 2.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91773276|ref|YP_565968.1| - 2.2e-08 34.1 14.5 2.8e-08 33.8 14.5 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773276|ref|YP_565968.1| - 4e-08 32.9 13.7 4.4e-05 23.3 2.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91773276|ref|YP_565968.1| - 9.1e-08 32.6 13.7 0.00037 21.0 3.9 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773276|ref|YP_565968.1| - 1.1e-07 31.6 16.1 0.00014 21.8 4.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773276|ref|YP_565968.1| - 6e-07 29.5 14.1 1.6e-06 28.2 14.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91773276|ref|YP_565968.1| - 2.2e-06 28.5 13.2 0.0017 19.2 3.7 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|91773276|ref|YP_565968.1| - 4.9e-05 23.4 15.7 0.0062 16.6 3.7 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91773276|ref|YP_565968.1| - 0.00024 21.6 13.9 0.0033 17.9 2.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91773276|ref|YP_565968.1| - 0.00049 20.5 14.4 0.011 16.2 2.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|91773276|ref|YP_565968.1| - 0.0069 17.2 14.9 0.26 12.1 4.5 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91773276|ref|YP_565968.1| - 0.027 15.4 17.9 0.38 11.8 4.4 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|91773276|ref|YP_565968.1| - 0.068 13.7 14.6 1.1 9.9 3.6 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|91773276|ref|YP_565968.1| - 0.21 12.3 14.0 0.61 10.9 3.1 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain ADD_DNMT3 PF17980.1 gi|91773276|ref|YP_565968.1| - 0.6 10.1 8.2 2.6 8.1 1.1 2.2 1 1 1 2 2 2 0 Cysteine rich ADD domain in DNMT3 Fer4_18 PF13746.6 gi|91773276|ref|YP_565968.1| - 1 9.6 13.2 4.1 7.6 13.2 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Elf1 PF05129.13 gi|91773276|ref|YP_565968.1| - 2.8 8.1 9.9 5 7.2 9.9 1.5 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Amino_oxidase PF01593.24 gi|91773277|ref|YP_565969.1| - 7.9e-17 61.7 0.0 1.1e-16 61.2 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|91773277|ref|YP_565969.1| - 3.8e-11 43.1 0.0 1e-10 41.6 0.1 1.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|91773277|ref|YP_565969.1| - 1.5e-08 34.7 1.3 5e-06 26.3 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|91773277|ref|YP_565969.1| - 1e-06 28.2 0.7 0.0093 15.2 0.0 3.2 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|91773277|ref|YP_565969.1| - 4.2e-06 26.1 2.0 0.01 15.0 0.7 3.0 3 0 0 3 3 3 2 FAD binding domain HI0933_like PF03486.14 gi|91773277|ref|YP_565969.1| - 0.00013 20.8 1.8 0.013 14.2 0.7 2.2 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox PF00070.27 gi|91773277|ref|YP_565969.1| - 0.001 19.6 3.9 0.022 15.3 0.2 2.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GMC_oxred_N PF00732.19 gi|91773277|ref|YP_565969.1| - 0.012 15.0 0.6 0.022 14.2 0.1 1.5 2 0 0 2 2 2 0 GMC oxidoreductase FAD_binding_3 PF01494.19 gi|91773277|ref|YP_565969.1| - 0.16 11.2 1.0 0.37 10.0 0.9 1.7 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.22 gi|91773277|ref|YP_565969.1| - 0.16 11.0 1.6 0.28 10.2 0.2 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A Radical_SAM PF04055.21 gi|91773278|ref|YP_565970.1| - 6.7e-15 55.9 0.1 1.7e-14 54.5 0.1 1.7 2 0 0 2 2 2 1 Radical SAM superfamily Radical_SAM PF04055.21 gi|91773279|ref|YP_565971.1| - 1.6e-18 67.6 0.2 2.4e-18 67.1 0.2 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Radical_SAM PF04055.21 gi|91773280|ref|YP_565972.1| - 3.3e-18 66.6 0.2 5.2e-18 66.0 0.2 1.3 1 0 0 1 1 1 1 Radical SAM superfamily CofC PF01983.16 gi|91773281|ref|YP_565973.1| - 5.5e-51 172.8 0.5 6.6e-51 172.6 0.5 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|91773281|ref|YP_565973.1| - 0.0021 18.5 0.0 0.0026 18.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CutA1 PF03091.15 gi|91773282|ref|YP_565974.1| - 5.7e-30 103.1 0.3 6.4e-30 102.9 0.3 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein SCAPER_N PF16501.5 gi|91773282|ref|YP_565974.1| - 0.066 13.2 0.7 0.13 12.3 0.3 1.7 1 1 1 2 2 2 0 S phase cyclin A-associated protein in the endoplasmic reticulum Caskin-tail PF16632.5 gi|91773282|ref|YP_565974.1| - 0.096 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 C-terminal region of Caskin Fer4 PF00037.27 gi|91773283|ref|YP_565975.1| - 5.2e-14 51.4 16.6 6.4e-07 28.9 4.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91773283|ref|YP_565975.1| - 3.3e-12 46.8 34.0 4e-07 30.5 12.6 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91773283|ref|YP_565975.1| - 6.4e-10 39.8 22.3 3.9e-05 24.5 0.8 2.1 1 1 2 3 3 3 3 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|91773283|ref|YP_565975.1| - 4e-09 36.0 11.5 3.2e-05 23.7 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91773283|ref|YP_565975.1| - 9e-09 35.3 24.5 1.9e-05 24.7 13.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773283|ref|YP_565975.1| - 1.9e-08 34.1 13.0 0.0002 21.3 3.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773283|ref|YP_565975.1| - 2e-07 31.1 21.9 5.8e-06 26.4 12.2 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91773283|ref|YP_565975.1| - 6.6e-07 29.4 12.1 2.6e-06 27.5 12.1 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91773283|ref|YP_565975.1| - 2.8e-05 24.3 12.4 0.0037 17.7 3.1 2.3 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91773283|ref|YP_565975.1| - 0.00017 22.0 12.8 0.02 15.3 3.2 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91773283|ref|YP_565975.1| - 0.00019 22.2 20.1 0.03 15.3 4.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91773283|ref|YP_565975.1| - 0.0014 19.1 11.7 0.12 12.9 3.1 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773283|ref|YP_565975.1| - 0.0018 18.8 10.4 0.016 15.7 2.4 2.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|91773283|ref|YP_565975.1| - 0.016 15.4 11.1 0.38 11.0 1.8 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91773283|ref|YP_565975.1| - 0.074 13.8 11.6 0.98 10.2 0.5 2.7 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|91773283|ref|YP_565975.1| - 0.18 12.7 14.8 0.31 11.9 3.6 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_19 PF06902.11 gi|91773283|ref|YP_565975.1| - 4.6 7.4 10.8 1.1 9.3 0.5 3.3 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster FAD_binding_3 PF01494.19 gi|91773284|ref|YP_565976.1| - 2e-17 63.5 2.1 6.5e-09 35.5 0.3 3.0 2 1 0 2 2 2 2 FAD binding domain FAD_binding_2 PF00890.24 gi|91773284|ref|YP_565976.1| - 2.7e-10 39.9 1.7 3.8e-07 29.5 0.2 2.3 1 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|91773284|ref|YP_565976.1| - 2.8e-10 40.1 2.6 1.3e-09 37.9 2.6 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|91773284|ref|YP_565976.1| - 8.3e-08 31.3 0.1 2.8e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|91773284|ref|YP_565976.1| - 1.1e-06 28.8 0.0 2.7e-06 27.5 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|91773284|ref|YP_565976.1| - 2.6e-06 26.9 2.5 8.5e-06 25.2 0.4 2.1 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|91773284|ref|YP_565976.1| - 3.7e-06 26.3 1.0 6.8e-06 25.4 1.0 1.4 1 1 0 1 1 1 1 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|91773284|ref|YP_565976.1| - 9.2e-06 24.9 0.4 0.019 14.1 0.9 2.5 2 1 0 2 2 2 2 Lycopene cyclase protein Thi4 PF01946.17 gi|91773284|ref|YP_565976.1| - 7.8e-05 22.0 0.3 0.00027 20.3 0.1 1.9 2 0 0 2 2 2 1 Thi4 family DAO PF01266.24 gi|91773284|ref|YP_565976.1| - 0.0005 19.8 0.5 0.044 13.4 0.2 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|91773284|ref|YP_565976.1| - 0.00087 18.3 0.1 0.32 9.8 0.1 2.2 2 0 0 2 2 2 2 Tryptophan halogenase Pyr_redox_3 PF13738.6 gi|91773284|ref|YP_565976.1| - 0.011 15.0 0.5 0.018 14.3 0.5 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|91773284|ref|YP_565976.1| - 0.082 12.2 0.4 0.17 11.1 0.1 1.8 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|91773284|ref|YP_565976.1| - 0.15 11.9 0.5 0.32 10.9 0.1 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|91773284|ref|YP_565976.1| - 0.89 10.2 3.0 0.82 10.3 0.1 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase TrkH PF02386.16 gi|91773285|ref|YP_565977.1| - 1.3e-69 235.0 22.9 4.1e-68 230.1 22.9 2.0 1 1 0 1 1 1 1 Cation transport protein Bac_export_2 PF01312.19 gi|91773285|ref|YP_565977.1| - 2.9 7.0 11.9 0.06 12.5 1.2 2.5 1 1 1 2 2 2 0 FlhB HrpN YscU SpaS Family TrkA_N PF02254.18 gi|91773286|ref|YP_565978.1| - 4.9e-51 171.9 4.8 1.2e-26 93.3 0.1 2.3 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|91773286|ref|YP_565978.1| - 8.9e-31 105.5 1.2 1.9e-14 53.2 0.1 3.0 3 0 0 3 3 3 2 TrkA-C domain Shikimate_DH PF01488.20 gi|91773286|ref|YP_565978.1| - 1.8e-11 44.2 3.4 9.7e-05 22.4 0.1 2.4 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 gi|91773286|ref|YP_565978.1| - 6.5e-11 42.6 1.5 5e-05 23.7 0.1 2.7 2 0 0 2 2 2 2 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|91773286|ref|YP_565978.1| - 4.7e-10 39.1 2.1 0.0005 19.4 0.0 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|91773286|ref|YP_565978.1| - 3.4e-09 37.0 3.7 0.0015 18.8 0.1 2.7 2 0 0 2 2 2 2 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|91773286|ref|YP_565978.1| - 8.7e-07 29.5 0.7 0.0038 17.8 0.1 2.8 2 0 0 2 2 2 2 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.23 gi|91773286|ref|YP_565978.1| - 2.2e-05 24.5 0.2 0.13 12.2 0.0 2.4 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 gi|91773286|ref|YP_565978.1| - 0.0001 22.2 0.8 0.28 11.1 0.1 3.1 2 1 2 4 4 4 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 gi|91773286|ref|YP_565978.1| - 0.00011 22.4 0.1 0.032 14.4 0.0 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Methyltransf_25 PF13649.6 gi|91773286|ref|YP_565978.1| - 0.00015 22.4 0.1 0.04 14.6 0.0 2.9 3 0 0 3 3 3 1 Methyltransferase domain Castor_Poll_mid PF06241.12 gi|91773286|ref|YP_565978.1| - 0.00022 21.1 0.2 0.63 10.0 0.1 2.6 2 0 0 2 2 2 2 Castor and Pollux, part of voltage-gated ion channel Pyr_redox_2 PF07992.14 gi|91773286|ref|YP_565978.1| - 0.00031 20.1 0.8 0.03 13.5 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|91773286|ref|YP_565978.1| - 0.00034 20.0 0.0 0.054 12.7 0.0 2.3 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.27 gi|91773286|ref|YP_565978.1| - 0.00055 20.5 1.9 0.11 13.1 0.0 3.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|91773286|ref|YP_565978.1| - 0.00094 18.9 0.2 1.1 8.9 0.0 2.4 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 gi|91773286|ref|YP_565978.1| - 0.0012 18.4 1.0 0.074 12.6 0.4 3.0 3 0 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DAO PF01266.24 gi|91773286|ref|YP_565978.1| - 0.0016 18.1 0.3 1.9 8.0 0.2 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|91773286|ref|YP_565978.1| - 0.0029 16.4 0.1 0.16 10.6 0.0 2.2 2 0 0 2 2 2 1 HI0933-like protein DUF1188 PF06690.11 gi|91773286|ref|YP_565978.1| - 0.0029 17.2 4.9 0.54 9.8 0.3 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF1188) NAD_binding_10 PF13460.6 gi|91773286|ref|YP_565978.1| - 0.006 16.5 2.4 1.5 8.7 0.2 2.6 3 0 0 3 3 2 2 NAD(P)H-binding Trp_halogenase PF04820.14 gi|91773286|ref|YP_565978.1| - 0.025 13.4 0.2 0.33 9.8 0.0 2.2 2 0 0 2 2 2 0 Tryptophan halogenase ThiF PF00899.21 gi|91773286|ref|YP_565978.1| - 0.026 13.9 0.6 9.9 5.4 0.1 3.2 3 0 0 3 3 3 0 ThiF family NmrA PF05368.13 gi|91773286|ref|YP_565978.1| - 0.036 13.6 1.7 1 8.8 0.3 2.3 2 0 0 2 2 2 0 NmrA-like family Pyr_redox_3 PF13738.6 gi|91773286|ref|YP_565978.1| - 0.043 13.1 2.6 1.5 8.0 0.0 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase PglD_N PF17836.1 gi|91773286|ref|YP_565978.1| - 0.044 14.4 4.3 1.9 9.2 1.2 2.6 2 0 0 2 2 2 0 PglD N-terminal domain XdhC_C PF13478.6 gi|91773286|ref|YP_565978.1| - 0.044 14.3 0.1 11 6.6 0.0 2.5 2 0 0 2 2 2 0 XdhC Rossmann domain AdoHcyase_NAD PF00670.21 gi|91773286|ref|YP_565978.1| - 0.066 13.3 0.4 0.066 13.3 0.4 2.8 2 1 1 3 3 3 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Methyltransf_31 PF13847.6 gi|91773286|ref|YP_565978.1| - 0.087 12.6 0.2 0.49 10.2 0.1 2.2 2 0 0 2 2 2 0 Methyltransferase domain Spermine_synth PF01564.17 gi|91773286|ref|YP_565978.1| - 0.51 9.7 4.3 0.94 8.8 0.4 2.6 3 0 0 3 3 2 0 Spermine/spermidine synthase domain DnaJ_C PF01556.18 gi|91773287|ref|YP_565979.1| - 2.9e-40 137.8 0.1 4e-40 137.3 0.1 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|91773287|ref|YP_565979.1| - 1.6e-27 95.4 5.0 2.6e-27 94.7 5.0 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|91773287|ref|YP_565979.1| - 1.1e-14 54.5 17.0 2.4e-14 53.4 17.0 1.6 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|91773287|ref|YP_565979.1| - 0.028 14.4 19.2 0.5 10.4 0.3 3.3 1 1 3 4 4 4 0 Tryptophan RNA-binding attenuator protein inhibitory protein LprI PF07007.12 gi|91773287|ref|YP_565979.1| - 0.17 12.6 0.2 0.27 11.9 0.2 1.3 1 0 0 1 1 1 0 Lysozyme inhibitor LprI Cytochrom_c3_2 PF14537.6 gi|91773287|ref|YP_565979.1| - 0.23 11.9 5.1 0.58 10.7 5.1 1.7 1 0 0 1 1 1 0 Cytochrome c3 zf-FPG_IleRS PF06827.14 gi|91773287|ref|YP_565979.1| - 1.5 8.7 7.4 3.7 7.5 1.6 2.5 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS zf-C3HC4_3 PF13920.6 gi|91773287|ref|YP_565979.1| - 2 8.4 7.4 1.7 8.5 1.0 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.7 gi|91773287|ref|YP_565979.1| - 2.3 8.3 12.2 91 3.2 12.2 2.2 1 1 0 1 1 1 0 Double zinc ribbon Cytochrome_C7 PF14522.6 gi|91773287|ref|YP_565979.1| - 8.8 6.4 10.0 42 4.3 10.0 2.1 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c HSP70 PF00012.20 gi|91773288|ref|YP_565980.1| - 5.3e-245 814.2 15.4 8.4e-218 724.4 9.1 2.0 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 gi|91773288|ref|YP_565980.1| - 6.4e-17 61.4 1.4 6.4e-17 61.4 1.4 2.2 2 1 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 gi|91773288|ref|YP_565980.1| - 0.00013 22.3 5.0 0.068 13.6 0.1 3.9 3 1 0 3 3 3 2 Cell division protein FtsA FGGY_C PF02782.16 gi|91773288|ref|YP_565980.1| - 0.0013 18.5 0.0 0.003 17.3 0.0 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DUF3347 PF11827.8 gi|91773288|ref|YP_565980.1| - 0.19 11.9 12.7 0.33 11.1 8.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3347) Phage_connect_1 PF05135.13 gi|91773288|ref|YP_565980.1| - 2.7 8.6 8.7 7.8 7.1 0.7 3.2 3 1 0 3 3 3 0 Phage gp6-like head-tail connector protein Vfa1 PF08432.10 gi|91773288|ref|YP_565980.1| - 9.5 6.5 8.4 17 5.7 8.4 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 GrpE PF01025.19 gi|91773289|ref|YP_565981.1| - 2.8e-53 180.0 5.1 3.3e-53 179.8 5.1 1.0 1 0 0 1 1 1 1 GrpE Heme_oxygenase PF01126.20 gi|91773289|ref|YP_565981.1| - 0.015 15.1 0.5 0.083 12.7 0.2 2.3 1 1 1 2 2 2 0 Heme oxygenase Mer2 PF09074.10 gi|91773289|ref|YP_565981.1| - 0.031 14.1 2.9 0.055 13.3 2.8 1.5 1 1 0 1 1 1 0 Mer2 Goodbye PF17109.5 gi|91773289|ref|YP_565981.1| - 0.98 9.9 3.5 3.2 8.2 1.2 2.2 1 1 0 2 2 2 0 fungal STAND N-terminal Goodbye domain ABC2_membrane_5 PF13346.6 gi|91773290|ref|YP_565982.1| - 4.3 6.8 14.5 6.7 6.2 14.5 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein FixQ PF05545.11 gi|91773290|ref|YP_565982.1| - 7.2 6.7 7.5 4.1 7.4 0.0 2.7 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ ATP-grasp_3 PF02655.14 gi|91773291|ref|YP_565983.1| - 7.8e-40 136.6 0.0 1.1e-39 136.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain preATP-grasp_3 PF18301.1 gi|91773291|ref|YP_565983.1| - 8.5e-08 32.4 0.0 1.9e-07 31.3 0.0 1.6 1 0 0 1 1 1 1 pre ATP-grasp 3 domain ATPgrasp_Ter PF15632.6 gi|91773291|ref|YP_565983.1| - 0.0001 22.0 0.0 0.0002 21.1 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATPgrasp_ST PF14397.6 gi|91773291|ref|YP_565983.1| - 0.00084 18.7 0.0 0.26 10.5 0.0 2.5 2 1 0 3 3 3 2 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 gi|91773291|ref|YP_565983.1| - 0.015 14.8 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus RimK PF08443.11 gi|91773291|ref|YP_565983.1| - 0.11 12.1 0.0 0.39 10.3 0.0 1.9 2 0 0 2 2 2 0 RimK-like ATP-grasp domain Hydantoinase_A PF01968.18 gi|91773292|ref|YP_565984.1| - 3.4e-30 105.3 0.9 2.3e-29 102.6 0.1 1.9 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|91773292|ref|YP_565984.1| - 4.2e-05 22.3 0.3 0.012 14.2 0.0 2.5 3 0 0 3 3 3 2 MutL protein Methyltransf_25 PF13649.6 gi|91773292|ref|YP_565984.1| - 0.062 14.0 0.0 0.7 10.6 0.0 2.4 2 0 0 2 2 2 0 Methyltransferase domain AA_kinase PF00696.28 gi|91773293|ref|YP_565985.1| - 3e-20 72.8 0.6 4.6e-09 36.2 0.1 2.1 1 1 0 2 2 2 2 Amino acid kinase family DUF4258 PF14076.6 gi|91773293|ref|YP_565985.1| - 0.0082 16.5 0.2 0.015 15.6 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4258) DUF1610 PF07754.11 gi|91773294|ref|YP_565986.1| - 0.00087 19.2 3.3 0.00087 19.2 3.3 2.4 3 0 0 3 3 2 1 Domain of unknown function (DUF1610) DUF2039 PF10217.9 gi|91773294|ref|YP_565986.1| - 0.006 16.9 3.7 0.006 16.9 3.7 1.7 1 1 1 2 2 2 1 Uncharacterized conserved protein (DUF2039) zf-UBP PF02148.19 gi|91773294|ref|YP_565986.1| - 0.0088 16.4 0.5 0.0088 16.4 0.5 2.0 2 1 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein zf-CHY PF05495.12 gi|91773294|ref|YP_565986.1| - 0.01 16.3 10.0 0.032 14.7 10.0 1.7 1 1 0 1 1 1 0 CHY zinc finger zinc_ribbon_10 PF10058.9 gi|91773294|ref|YP_565986.1| - 0.018 14.8 4.0 0.018 14.8 4.0 1.9 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein DZR PF12773.7 gi|91773294|ref|YP_565986.1| - 0.043 13.9 15.2 1.1 9.4 15.2 2.2 1 1 0 1 1 1 0 Double zinc ribbon zf-HYPF PF07503.12 gi|91773294|ref|YP_565986.1| - 0.08 12.7 12.3 3 7.7 9.7 2.2 2 0 0 2 2 2 0 HypF finger zinc-ribbons_6 PF07191.12 gi|91773294|ref|YP_565986.1| - 0.17 11.9 11.1 0.6 10.1 11.1 1.8 1 1 0 1 1 1 0 zinc-ribbons C1_2 PF03107.16 gi|91773294|ref|YP_565986.1| - 0.18 12.1 10.0 0.58 10.5 6.3 2.2 1 1 1 2 2 2 0 C1 domain Rhodanese_C PF12368.8 gi|91773294|ref|YP_565986.1| - 0.23 11.9 8.9 0.26 11.7 8.9 1.1 1 0 0 1 1 1 0 Rhodanase C-terminal zf-Mss51 PF13824.6 gi|91773294|ref|YP_565986.1| - 0.49 10.5 10.5 0.9 9.7 7.2 2.1 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Zn_Tnp_IS91 PF14319.6 gi|91773294|ref|YP_565986.1| - 0.5 10.4 10.0 0.88 9.6 10.0 1.4 1 1 0 1 1 1 0 Transposase zinc-binding domain zf-C4_Topoisom PF01396.19 gi|91773294|ref|YP_565986.1| - 0.53 10.1 12.3 3.2 7.6 0.1 3.7 3 1 1 4 4 4 0 Topoisomerase DNA binding C4 zinc finger HypA PF01155.19 gi|91773294|ref|YP_565986.1| - 0.6 10.2 12.5 0.86 9.6 0.8 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|91773294|ref|YP_565986.1| - 0.85 9.1 12.6 1.5 8.3 0.6 3.7 4 0 0 4 4 4 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|91773294|ref|YP_565986.1| - 1.6 8.7 14.1 4.2 7.4 0.1 3.8 3 1 0 3 3 3 0 Nudix N-terminal PolC_DP2 PF03833.13 gi|91773294|ref|YP_565986.1| - 1.8 6.3 7.1 1.8 6.3 7.1 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Spt4 PF06093.13 gi|91773294|ref|YP_565986.1| - 2.5 8.3 8.8 2.2 8.4 4.3 2.1 1 1 1 2 2 2 0 Spt4/RpoE2 zinc finger zf-HIT PF04438.16 gi|91773294|ref|YP_565986.1| - 2.5 8.1 18.4 0.57 10.1 7.0 3.1 1 1 1 2 2 2 0 HIT zinc finger zinc_ribbon_2 PF13240.6 gi|91773294|ref|YP_565986.1| - 2.5 7.9 18.4 13 5.6 0.1 3.9 3 1 0 3 3 3 0 zinc-ribbon domain zf_C2H2_10 PF18414.1 gi|91773294|ref|YP_565986.1| - 2.5 7.7 11.4 0.58 9.7 1.3 3.3 3 0 0 3 3 3 0 C2H2 type zinc-finger NMD3 PF04981.13 gi|91773294|ref|YP_565986.1| - 3.9 6.9 8.6 4.2 6.8 8.6 1.0 1 0 0 1 1 1 0 NMD3 family OrfB_Zn_ribbon PF07282.11 gi|91773294|ref|YP_565986.1| - 4.2 7.4 12.1 32 4.5 12.1 2.0 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zf-tcix PF14952.6 gi|91773294|ref|YP_565986.1| - 4.7 6.9 17.2 3.2 7.4 0.1 3.2 2 1 1 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding DUF2752 PF10825.8 gi|91773294|ref|YP_565986.1| - 6.7 6.8 9.6 3.1 7.9 0.3 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2752) zinc_ribbon_4 PF13717.6 gi|91773294|ref|YP_565986.1| - 7.1 6.6 17.2 8.6 6.4 0.1 4.0 4 0 0 4 4 4 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|91773294|ref|YP_565986.1| - 7.2 6.0 17.8 27 4.2 0.0 3.9 2 1 0 2 2 2 0 Transcription factor zinc-finger Zn-ribbon_8 PF09723.10 gi|91773294|ref|YP_565986.1| - 7.4 6.8 18.0 1.9 8.6 2.8 3.2 1 1 2 3 3 3 0 Zinc ribbon domain EF1_GNE PF00736.19 gi|91773295|ref|YP_565987.1| - 1e-18 67.3 0.0 1.2e-18 67.1 0.0 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain ThiI PF02568.14 gi|91773296|ref|YP_565988.1| - 4e-33 114.7 0.0 5.7e-33 114.2 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|91773296|ref|YP_565988.1| - 8.2e-19 68.1 0.0 1.1e-16 61.2 0.0 2.1 2 0 0 2 2 2 2 THUMP domain tRNA_Me_trans PF03054.16 gi|91773296|ref|YP_565988.1| - 3e-05 23.0 0.1 7.1e-05 21.8 0.0 1.6 2 0 0 2 2 2 1 tRNA methyl transferase QueC PF06508.13 gi|91773296|ref|YP_565988.1| - 0.02 14.4 0.0 0.026 14.0 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Mtf2_C PF14061.6 gi|91773296|ref|YP_565988.1| - 0.055 13.6 0.1 0.1 12.8 0.1 1.3 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 NAD_synthase PF02540.17 gi|91773296|ref|YP_565988.1| - 0.12 11.5 0.0 0.33 10.0 0.0 1.7 1 1 1 2 2 2 0 NAD synthase PhnA_Zn_Ribbon PF08274.12 gi|91773297|ref|YP_565989.1| - 4.1e-05 23.4 4.1 5.9e-05 22.9 4.1 1.2 1 0 0 1 1 1 1 PhnA Zinc-Ribbon RNA_POL_M_15KD PF02150.16 gi|91773297|ref|YP_565989.1| - 0.0006 19.6 3.0 0.00097 19.0 3.0 1.3 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit A2L_zn_ribbon PF08792.10 gi|91773297|ref|YP_565989.1| - 0.0012 18.5 1.8 0.002 17.8 1.8 1.4 1 0 0 1 1 1 1 A2L zinc ribbon domain Prok-RING_1 PF14446.6 gi|91773297|ref|YP_565989.1| - 0.023 14.6 0.8 0.031 14.2 0.8 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Pyrophosphatase PF00719.19 gi|91773297|ref|YP_565989.1| - 0.072 12.9 0.0 0.078 12.8 0.0 1.0 1 0 0 1 1 1 0 Inorganic pyrophosphatase zf-TFIIB PF13453.6 gi|91773297|ref|YP_565989.1| - 0.12 11.7 2.2 0.22 10.9 2.2 1.5 1 0 0 1 1 1 0 Transcription factor zinc-finger zf-Dof PF02701.15 gi|91773297|ref|YP_565989.1| - 0.73 10.0 10.6 2 8.7 6.8 2.4 2 1 0 2 2 2 0 Dof domain, zinc finger zf_C2H2_10 PF18414.1 gi|91773297|ref|YP_565989.1| - 0.94 9.1 5.1 1.2 8.7 0.9 2.8 2 1 0 2 2 2 0 C2H2 type zinc-finger TF_Zn_Ribbon PF08271.12 gi|91773297|ref|YP_565989.1| - 1.3 8.6 5.4 3.9 7.1 5.4 1.8 1 1 0 1 1 1 0 TFIIB zinc-binding Toprim_4 PF13662.6 gi|91773298|ref|YP_565990.1| - 1.1e-05 25.8 0.0 2e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|91773298|ref|YP_565990.1| - 0.001 19.5 0.0 0.0014 19.0 0.0 1.3 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|91773298|ref|YP_565990.1| - 0.002 18.3 0.2 0.032 14.4 0.2 2.3 1 1 0 1 1 1 1 Toprim domain Acylphosphatase PF00708.18 gi|91773299|ref|YP_565991.1| - 3.5e-26 91.4 0.0 3.9e-26 91.3 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase tRNA-Thr_ED PF08915.11 gi|91773300|ref|YP_565992.1| - 1.4e-52 177.4 0.1 2.6e-52 176.5 0.1 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|91773300|ref|YP_565992.1| - 2.7e-19 69.1 0.3 5.9e-19 68.0 0.3 1.6 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|91773300|ref|YP_565992.1| - 1e-15 58.2 0.3 1.9e-15 57.3 0.3 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) AI-2E_transport PF01594.16 gi|91773302|ref|YP_565994.1| - 7.1e-39 133.9 46.2 8.6e-39 133.6 46.2 1.0 1 0 0 1 1 1 1 AI-2E family transporter PAPS_reduct PF01507.19 gi|91773303|ref|YP_565995.1| - 1.3e-39 136.0 0.0 1.8e-39 135.5 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Fer4_9 PF13187.6 gi|91773303|ref|YP_565995.1| - 1.2e-06 28.6 9.6 1.2e-06 28.6 9.6 3.2 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91773303|ref|YP_565995.1| - 1.2e-06 28.0 3.0 1.2e-06 28.0 3.0 3.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91773303|ref|YP_565995.1| - 3.3e-06 27.3 3.1 9.5e-06 25.8 3.1 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91773303|ref|YP_565995.1| - 4.5e-06 26.7 9.1 4.5e-06 26.7 9.1 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773303|ref|YP_565995.1| - 7.1e-06 26.5 10.3 7.1e-06 26.5 10.3 2.5 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91773303|ref|YP_565995.1| - 0.00018 22.3 1.5 0.00018 22.3 1.5 3.9 3 1 1 4 4 3 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|91773303|ref|YP_565995.1| - 0.0003 20.8 3.3 0.0003 20.8 3.3 4.2 3 2 1 5 5 5 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773303|ref|YP_565995.1| - 0.00086 19.3 3.6 0.00086 19.3 3.6 3.7 5 0 0 5 5 3 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91773303|ref|YP_565995.1| - 0.002 18.5 16.9 0.04 14.4 1.2 4.1 5 0 0 5 5 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773303|ref|YP_565995.1| - 0.0022 18.0 2.1 0.0022 18.0 2.1 4.0 4 1 0 4 4 2 2 4Fe-4S binding domain PUA PF01472.20 gi|91773303|ref|YP_565995.1| - 0.003 17.5 0.1 0.0076 16.2 0.1 1.6 1 0 0 1 1 1 1 PUA domain Fer4_17 PF13534.6 gi|91773303|ref|YP_565995.1| - 0.027 15.0 14.3 0.17 12.5 1.9 3.2 1 1 3 4 4 4 0 4Fe-4S dicluster domain ATP_bind_3 PF01171.20 gi|91773303|ref|YP_565995.1| - 0.034 13.9 0.0 0.06 13.1 0.0 1.4 1 0 0 1 1 1 0 PP-loop family UPF0113 PF03657.13 gi|91773303|ref|YP_565995.1| - 0.053 13.8 0.1 0.15 12.3 0.1 1.7 1 0 0 1 1 1 0 UPF0113 PUA domain Fer4_22 PF17179.4 gi|91773303|ref|YP_565995.1| - 0.99 10.3 8.8 4 8.4 0.7 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773303|ref|YP_565995.1| - 2.5 8.7 11.4 11 6.7 1.5 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_20 PF14691.6 gi|91773304|ref|YP_565996.1| - 2.7e-44 149.5 5.6 4.1e-44 148.9 5.6 1.3 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.14 gi|91773304|ref|YP_565996.1| - 1.6e-35 122.7 2.2 2.5e-35 122.1 2.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|91773304|ref|YP_565996.1| - 5.1e-12 46.2 3.6 2.7e-06 27.8 0.3 2.8 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|91773304|ref|YP_565996.1| - 1.9e-11 43.8 1.5 7.5e-06 25.4 0.0 3.5 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|91773304|ref|YP_565996.1| - 1.3e-08 35.2 0.5 0.0021 18.4 0.0 2.6 2 0 0 2 2 2 2 Putative NAD(P)-binding NAD_binding_8 PF13450.6 gi|91773304|ref|YP_565996.1| - 6.4e-08 32.7 0.6 6.4e-08 32.7 0.6 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|91773304|ref|YP_565996.1| - 2.8e-07 30.1 1.8 0.00063 19.1 0.0 2.5 2 1 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 gi|91773304|ref|YP_565996.1| - 9.1e-07 28.6 3.6 0.00013 21.4 0.1 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|91773304|ref|YP_565996.1| - 1.8e-06 27.4 0.8 4.8e-05 22.7 0.2 2.5 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 gi|91773304|ref|YP_565996.1| - 9.6e-06 25.1 0.4 7.3e-05 22.2 0.1 2.0 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 gi|91773304|ref|YP_565996.1| - 2.1e-05 23.8 2.5 2.1e-05 23.8 2.5 2.5 3 0 0 3 3 3 1 FAD binding domain GIDA PF01134.22 gi|91773304|ref|YP_565996.1| - 3.8e-05 23.0 2.5 0.0018 17.5 0.2 2.9 3 0 0 3 3 3 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|91773304|ref|YP_565996.1| - 5.4e-05 22.1 0.4 5.4e-05 22.1 0.4 2.0 2 0 0 2 2 2 1 HI0933-like protein Amino_oxidase PF01593.24 gi|91773304|ref|YP_565996.1| - 0.00013 21.4 0.3 0.00013 21.4 0.3 1.9 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Shikimate_DH PF01488.20 gi|91773304|ref|YP_565996.1| - 0.00031 20.8 0.1 5.6 7.0 0.0 4.5 6 0 0 6 6 4 1 Shikimate / quinate 5-dehydrogenase NAD_binding_9 PF13454.6 gi|91773304|ref|YP_565996.1| - 0.00063 19.8 1.0 0.07 13.1 0.3 3.1 3 0 0 3 3 3 1 FAD-NAD(P)-binding DAO PF01266.24 gi|91773304|ref|YP_565996.1| - 0.00088 19.0 0.8 0.00088 19.0 0.8 2.7 2 2 0 3 3 3 1 FAD dependent oxidoreductase F420_oxidored PF03807.17 gi|91773304|ref|YP_565996.1| - 0.0012 19.4 1.6 1.1 9.9 0.1 3.0 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent PALP PF00291.25 gi|91773304|ref|YP_565996.1| - 0.0025 17.3 0.2 2.1 7.7 0.0 2.9 3 0 0 3 3 3 1 Pyridoxal-phosphate dependent enzyme 2-Hacid_dh_C PF02826.19 gi|91773304|ref|YP_565996.1| - 0.0046 16.3 0.1 1 8.7 0.0 2.3 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|91773304|ref|YP_565996.1| - 0.0048 16.7 0.2 1.3 8.7 0.0 2.3 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Rossmann-like PF10727.9 gi|91773304|ref|YP_565996.1| - 0.024 14.5 0.4 1.5 8.6 0.2 2.4 2 0 0 2 2 2 0 Rossmann-like domain Fer4_7 PF12838.7 gi|91773304|ref|YP_565996.1| - 0.027 15.1 0.6 0.027 15.1 0.6 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain 3HCDH_N PF02737.18 gi|91773304|ref|YP_565996.1| - 0.027 14.3 0.3 0.3 11.0 0.1 2.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|91773304|ref|YP_565996.1| - 0.038 13.6 0.2 1.6 8.3 0.0 3.1 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|91773304|ref|YP_565996.1| - 0.04 14.2 0.6 10 6.4 0.0 2.9 3 0 0 3 3 2 0 TrkA-N domain K_oxygenase PF13434.6 gi|91773304|ref|YP_565996.1| - 0.045 12.9 0.1 4.3 6.4 0.0 2.6 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) Trp_halogenase PF04820.14 gi|91773304|ref|YP_565996.1| - 0.065 12.1 1.0 0.12 11.2 0.2 1.7 2 0 0 2 2 2 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|91773304|ref|YP_565996.1| - 0.3 10.1 3.0 0.14 11.2 0.3 1.8 2 0 0 2 2 2 0 Lycopene cyclase protein Fer4_2 PF12797.7 gi|91773304|ref|YP_565996.1| - 4 7.7 8.4 0.18 11.9 2.0 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain DHODB_Fe-S_bind PF10418.9 gi|91773305|ref|YP_565997.1| - 3.2e-12 46.0 4.6 5.4e-12 45.3 4.6 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|91773305|ref|YP_565997.1| - 1.9e-06 28.5 0.0 4.2e-06 27.4 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 gi|91773305|ref|YP_565997.1| - 0.088 12.9 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Fer2_3 PF13085.6 gi|91773305|ref|YP_565997.1| - 0.16 12.0 0.3 0.31 11.1 0.3 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain AdoMet_Synthase PF01941.19 gi|91773306|ref|YP_565998.1| - 4.9e-176 585.3 1.7 5.6e-176 585.2 1.7 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) HisG PF01634.18 gi|91773307|ref|YP_565999.1| - 7.5e-51 172.3 0.6 1e-50 171.9 0.6 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|91773307|ref|YP_565999.1| - 1.7e-23 82.5 0.5 4.5e-23 81.2 0.5 1.8 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.11 gi|91773307|ref|YP_565999.1| - 0.0054 16.7 0.1 5.1 7.0 0.0 3.0 1 1 1 2 2 2 2 NMT1/THI5 like P_gingi_FimA PF06321.11 gi|91773307|ref|YP_565999.1| - 0.019 15.1 0.2 0.029 14.5 0.2 1.3 1 0 0 1 1 1 0 Major fimbrial subunit protein (FimA) His_biosynth PF00977.21 gi|91773308|ref|YP_566000.1| - 1.5e-78 263.5 0.9 1.6e-78 263.3 0.9 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|91773308|ref|YP_566000.1| - 7.1e-10 38.5 0.1 0.00021 20.5 0.1 2.4 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|91773308|ref|YP_566000.1| - 4.9e-07 29.5 0.2 2.9e-06 26.9 0.1 1.9 2 0 0 2 2 2 1 Nitronate monooxygenase DHO_dh PF01180.21 gi|91773308|ref|YP_566000.1| - 1e-06 28.2 0.6 0.00023 20.5 0.1 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase TMP-TENI PF02581.17 gi|91773308|ref|YP_566000.1| - 2.2e-05 23.9 1.1 0.00021 20.7 0.1 2.2 2 0 0 2 2 2 1 Thiamine monophosphate synthase NanE PF04131.14 gi|91773308|ref|YP_566000.1| - 2.9e-05 23.4 0.3 0.066 12.4 0.1 2.2 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|91773308|ref|YP_566000.1| - 3.5e-05 23.2 0.3 0.14 11.5 0.1 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG G3P_antiterm PF04309.12 gi|91773308|ref|YP_566000.1| - 4.1e-05 23.1 0.6 0.0041 16.6 0.1 2.2 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator PcrB PF01884.17 gi|91773308|ref|YP_566000.1| - 9.8e-05 21.9 0.4 0.0088 15.5 0.0 2.2 2 0 0 2 2 2 1 PcrB family IMPDH PF00478.25 gi|91773308|ref|YP_566000.1| - 0.00022 20.4 0.3 0.02 13.9 0.0 2.1 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|91773308|ref|YP_566000.1| - 0.00024 20.2 0.3 0.1 11.6 0.0 2.2 2 0 0 2 2 2 2 FMN-dependent dehydrogenase IGPS PF00218.21 gi|91773308|ref|YP_566000.1| - 0.0012 18.1 0.0 0.005 16.0 0.0 1.9 2 1 0 2 2 2 1 Indole-3-glycerol phosphate synthase DUF561 PF04481.12 gi|91773308|ref|YP_566000.1| - 0.0018 17.5 0.1 0.0033 16.6 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF561) Trp_syntA PF00290.20 gi|91773308|ref|YP_566000.1| - 0.0067 15.3 0.4 0.03 13.2 0.1 1.9 2 0 0 2 2 2 1 Tryptophan synthase alpha chain DNA_pol_lambd_f PF10391.9 gi|91773308|ref|YP_566000.1| - 0.013 15.3 0.1 5.6 6.9 0.0 3.2 3 0 0 3 3 3 0 Fingers domain of DNA polymerase lambda DeoC PF01791.9 gi|91773308|ref|YP_566000.1| - 0.058 13.0 0.0 0.25 10.9 0.0 1.9 2 0 0 2 2 2 0 DeoC/LacD family aldolase DinI PF06183.13 gi|91773308|ref|YP_566000.1| - 0.16 12.4 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 DinI-like family IGPD PF00475.18 gi|91773309|ref|YP_566001.1| - 1.1e-63 213.9 1.6 1.4e-63 213.5 1.6 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase MutS_V PF00488.21 gi|91773310|ref|YP_566002.1| - 1.7e-07 31.5 0.0 3.1e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 MutS domain V HHH_5 PF14520.6 gi|91773310|ref|YP_566002.1| - 2e-07 31.5 0.1 0.0015 19.1 0.0 3.0 2 0 0 2 2 2 2 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|91773310|ref|YP_566002.1| - 0.00039 20.5 0.1 0.0011 19.0 0.1 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF4130 PF13566.6 gi|91773311|ref|YP_566003.1| - 4.4e-07 30.0 0.0 6.3e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4130 HHH_3 PF12836.7 gi|91773312|ref|YP_566004.1| - 2e-08 34.3 0.0 4.9e-08 33.1 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif Radical_SAM PF04055.21 gi|91773312|ref|YP_566004.1| - 1.2e-05 25.7 0.5 0.00011 22.6 0.4 2.6 1 1 0 1 1 1 1 Radical SAM superfamily HHH PF00633.23 gi|91773312|ref|YP_566004.1| - 0.0054 16.5 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif OrfB_Zn_ribbon PF07282.11 gi|91773312|ref|YP_566004.1| - 0.073 13.0 0.7 0.23 11.4 0.0 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain HHH_2 PF12826.7 gi|91773312|ref|YP_566004.1| - 0.11 12.6 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|91773312|ref|YP_566004.1| - 0.14 12.7 0.0 0.33 11.6 0.0 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix domain ADP_PFK_GK PF04587.15 gi|91773313|ref|YP_566005.1| - 8.5e-09 34.5 0.1 8.5e-09 34.5 0.1 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region ADP_PFK_GK PF04587.15 gi|91773314|ref|YP_566006.1| - 2.3e-70 237.3 0.0 2.7e-70 237.1 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region ADP_PFK_GK PF04587.15 gi|91773315|ref|YP_566007.1| - 9e-115 383.6 0.0 1e-114 383.4 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region ArgJ PF01960.18 gi|91773316|ref|YP_566008.1| - 6.7e-138 459.5 3.5 7.9e-138 459.3 3.5 1.0 1 0 0 1 1 1 1 ArgJ family HAP PF03866.13 gi|91773316|ref|YP_566008.1| - 0.0088 16.1 0.8 2.8 7.9 0.1 2.5 2 0 0 2 2 2 2 Hydrophobic abundant protein (HAP) CBS PF00571.28 gi|91773317|ref|YP_566009.1| - 1.5e-33 115.0 3.4 3.1e-16 59.5 0.2 2.2 2 0 0 2 2 2 2 CBS domain Peptidase_S55 PF05580.12 gi|91773317|ref|YP_566009.1| - 0.1 12.5 0.4 0.98 9.3 0.0 2.1 2 0 0 2 2 2 0 SpoIVB peptidase S55 DUF3659 PF12396.8 gi|91773317|ref|YP_566009.1| - 0.62 10.0 3.9 13 5.8 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) Semialdhyde_dh PF01118.24 gi|91773318|ref|YP_566010.1| - 1.4e-33 115.9 0.0 2.4e-33 115.2 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|91773318|ref|YP_566010.1| - 4.5e-21 75.8 0.0 6.5e-21 75.2 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.22 gi|91773318|ref|YP_566010.1| - 0.1 13.4 0.0 0.22 12.3 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold F420_oxidored PF03807.17 gi|91773318|ref|YP_566010.1| - 0.13 12.9 0.0 0.25 11.9 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Nuc_deoxyrib_tr PF05014.15 gi|91773319|ref|YP_566011.1| - 4.5e-29 101.1 0.0 5.2e-29 100.9 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase Nuc_deoxyri_tr2 PF15891.5 gi|91773319|ref|YP_566011.1| - 8.3e-22 77.5 0.0 1e-21 77.3 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase like TIR_2 PF13676.6 gi|91773319|ref|YP_566011.1| - 6.7e-05 23.5 0.0 0.00016 22.2 0.0 1.6 1 1 0 1 1 1 1 TIR domain LDcluster4 PF18306.1 gi|91773319|ref|YP_566011.1| - 0.0011 18.5 0.0 0.0014 18.3 0.0 1.2 1 0 0 1 1 1 1 SLOG cluster4 family DUF4062 PF13271.6 gi|91773319|ref|YP_566011.1| - 0.039 14.3 0.0 0.063 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4062) Reprolysin_3 PF13582.6 gi|91773319|ref|YP_566011.1| - 0.062 13.8 0.0 0.074 13.6 0.0 1.1 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like AMMECR1 PF01871.17 gi|91773320|ref|YP_566012.1| - 2.4e-45 154.2 0.0 2.7e-45 154.0 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 PGK PF00162.19 gi|91773321|ref|YP_566013.1| - 3.8e-104 348.6 0.0 4.3e-104 348.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DRTGG PF07085.12 gi|91773322|ref|YP_566014.1| - 3.7e-33 113.5 0.3 7.1e-33 112.5 0.3 1.5 1 0 0 1 1 1 1 DRTGG domain AAA_26 PF13500.6 gi|91773322|ref|YP_566014.1| - 2.6e-32 112.3 0.0 5.1e-32 111.3 0.0 1.5 2 0 0 2 2 2 1 AAA domain CbiA PF01656.23 gi|91773322|ref|YP_566014.1| - 0.00014 21.9 0.0 0.00056 20.0 0.0 2.1 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain Hpr_kinase_N PF02603.16 gi|91773322|ref|YP_566014.1| - 0.0049 16.9 0.0 0.019 15.0 0.0 1.9 1 1 1 2 2 2 1 HPr Serine kinase N terminus ATP-grasp_5 PF13549.6 gi|91773323|ref|YP_566015.1| - 4e-74 248.8 0.0 6.3e-74 248.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|91773323|ref|YP_566015.1| - 1.6e-55 186.7 4.5 4.3e-55 185.3 0.3 3.0 3 0 0 3 3 3 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|91773323|ref|YP_566015.1| - 2.2e-25 89.4 0.5 8.9e-25 87.4 0.1 2.3 2 0 0 2 2 2 1 CoA binding domain CoA_binding PF02629.19 gi|91773323|ref|YP_566015.1| - 3e-13 50.3 0.4 1.1e-12 48.5 0.1 2.2 2 0 0 2 2 2 1 CoA binding domain F_bP_aldolase PF01116.20 gi|91773323|ref|YP_566015.1| - 0.13 11.7 0.0 0.28 10.6 0.0 1.5 1 0 0 1 1 1 0 Fructose-bisphosphate aldolase class-II RibD_C PF01872.17 gi|91773324|ref|YP_566016.1| - 1.5e-22 80.5 0.0 1.5e-21 77.1 0.0 1.9 1 1 0 1 1 1 1 RibD C-terminal domain DHFR_1 PF00186.19 gi|91773324|ref|YP_566016.1| - 6.5e-06 25.9 0.0 9e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Dihydrofolate reductase FMN_red PF03358.15 gi|91773327|ref|YP_566019.1| - 9.2e-38 129.4 0.0 1.2e-37 129.1 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|91773327|ref|YP_566019.1| - 1.5e-13 50.9 0.0 1.9e-13 50.6 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|91773327|ref|YP_566019.1| - 0.019 15.2 0.0 0.036 14.3 0.0 1.4 1 1 0 1 1 1 0 Flavodoxin domain Fer4_17 PF13534.6 gi|91773327|ref|YP_566019.1| - 0.029 14.9 0.7 0.056 14.0 0.5 1.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain RecR PF02132.15 gi|91773327|ref|YP_566019.1| - 0.1 12.2 1.7 0.27 10.8 1.7 1.7 1 0 0 1 1 1 0 RecR protein T2SS_PulS_OutS PF09691.10 gi|91773327|ref|YP_566019.1| - 0.11 12.7 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Type II secretion system pilotin lipoprotein (PulS_OutS) zf_CCCH_4 PF18345.1 gi|91773327|ref|YP_566019.1| - 0.34 11.0 1.5 0.59 10.3 1.5 1.4 1 0 0 1 1 1 0 Zinc finger domain Voltage_CLC PF00654.20 gi|91773328|ref|YP_566020.1| - 2.9e-90 303.1 41.8 7.1e-88 295.2 33.4 2.0 1 1 1 2 2 2 2 Voltage gated chloride channel CBS PF00571.28 gi|91773328|ref|YP_566020.1| - 6.7e-26 90.5 1.6 2.6e-12 47.0 0.3 2.7 2 0 0 2 2 2 2 CBS domain UPF0004 PF00919.20 gi|91773329|ref|YP_566021.1| - 3.8e-23 81.4 0.3 8e-23 80.3 0.3 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 Radical_SAM PF04055.21 gi|91773329|ref|YP_566021.1| - 1.2e-18 68.1 0.1 1.4e-17 64.6 0.0 2.2 2 0 0 2 2 2 1 Radical SAM superfamily NAD_binding_2 PF03446.15 gi|91773329|ref|YP_566021.1| - 0.13 12.4 0.1 0.24 11.6 0.1 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase FBPase_glpX PF03320.13 gi|91773330|ref|YP_566022.1| - 1.4e-114 382.2 5.9 1.6e-114 382.0 5.9 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CGI-121 PF08617.10 gi|91773331|ref|YP_566023.1| - 1.8e-09 37.9 0.1 3.1e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Kinase binding protein CGI-121 tRNA-synt_1 PF00133.22 gi|91773332|ref|YP_566024.1| - 5.6e-62 209.9 1.6 5.2e-44 150.5 0.4 2.7 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|91773332|ref|YP_566024.1| - 3.9e-26 91.7 0.5 6.6e-11 41.6 0.0 3.3 2 1 1 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|91773332|ref|YP_566024.1| - 6.6e-20 71.6 0.2 1.4e-19 70.6 0.2 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|91773332|ref|YP_566024.1| - 6.8e-10 38.8 0.1 4.4e-07 29.5 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|91773332|ref|YP_566024.1| - 2.5e-06 27.1 0.0 6.3e-06 25.8 0.0 1.6 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 DUF1858 PF08984.11 gi|91773332|ref|YP_566024.1| - 0.022 14.9 0.1 14 5.9 0.0 3.9 4 1 0 4 4 4 0 Domain of unknown function (DUF1858) tRNA-synt_1d PF00750.19 gi|91773332|ref|YP_566024.1| - 0.026 13.5 0.0 0.045 12.7 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (R) tRNA-synt_1f PF01921.18 gi|91773332|ref|YP_566024.1| - 0.039 12.9 0.0 0.091 11.7 0.0 1.5 2 0 0 2 2 2 0 tRNA synthetases class I (K) ArsR PF09824.9 gi|91773334|ref|YP_566026.1| - 2.6e-67 225.4 0.5 2.9e-67 225.2 0.5 1.0 1 0 0 1 1 1 1 ArsR transcriptional regulator Clathrin PF00637.20 gi|91773334|ref|YP_566026.1| - 0.057 13.3 0.2 2 8.3 0.0 2.2 2 0 0 2 2 2 0 Region in Clathrin and VPS HTH_24 PF13412.6 gi|91773335|ref|YP_566027.1| - 1.8e-10 40.2 0.2 5.3e-10 38.7 0.0 2.0 2 0 0 2 2 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|91773335|ref|YP_566027.1| - 1e-07 31.7 0.0 2.4e-07 30.5 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|91773335|ref|YP_566027.1| - 1.2e-07 31.6 0.0 2.6e-07 30.5 0.0 1.6 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|91773335|ref|YP_566027.1| - 4.5e-07 29.7 0.1 1.5e-06 28.0 0.0 1.9 2 0 0 2 2 1 1 MarR family HTH_3 PF01381.22 gi|91773335|ref|YP_566027.1| - 4.6e-06 26.6 0.3 0.0016 18.4 0.0 3.0 3 0 0 3 3 3 1 Helix-turn-helix HTH_Crp_2 PF13545.6 gi|91773335|ref|YP_566027.1| - 9.7e-06 25.5 0.1 0.00011 22.1 0.0 2.6 3 0 0 3 3 2 1 Crp-like helix-turn-helix domain HTH_27 PF13463.6 gi|91773335|ref|YP_566027.1| - 2e-05 25.0 0.0 4.5e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|91773335|ref|YP_566027.1| - 0.00022 21.1 0.0 0.00062 19.7 0.0 1.9 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_23 PF13384.6 gi|91773335|ref|YP_566027.1| - 0.00055 19.7 0.0 0.0012 18.5 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Fe_dep_repress PF01325.19 gi|91773335|ref|YP_566027.1| - 0.00076 19.6 0.0 0.0035 17.5 0.0 2.0 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 gi|91773335|ref|YP_566027.1| - 0.0011 19.3 0.0 0.0036 17.6 0.0 1.9 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.10 gi|91773335|ref|YP_566027.1| - 0.0028 17.4 0.0 0.0076 16.0 0.0 1.7 2 0 0 2 2 1 1 IclR helix-turn-helix domain HTH_28 PF13518.6 gi|91773335|ref|YP_566027.1| - 0.0038 17.3 0.0 0.0087 16.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|91773335|ref|YP_566027.1| - 0.012 15.2 0.0 0.025 14.2 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Phage_rep_O PF04492.13 gi|91773335|ref|YP_566027.1| - 0.023 15.3 0.0 0.057 14.0 0.0 1.7 1 0 0 1 1 1 0 Bacteriophage replication protein O HTH_10 PF04967.12 gi|91773335|ref|YP_566027.1| - 0.027 14.3 0.0 0.06 13.2 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain DUF4423 PF14394.6 gi|91773335|ref|YP_566027.1| - 0.03 14.0 0.0 0.097 12.4 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) Mnd1 PF03962.15 gi|91773335|ref|YP_566027.1| - 0.032 14.5 0.0 0.16 12.3 0.0 2.1 2 0 0 2 2 2 0 Mnd1 HTH domain YdaS_antitoxin PF15943.5 gi|91773335|ref|YP_566027.1| - 0.033 14.1 0.0 0.084 12.7 0.0 1.7 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_36 PF13730.6 gi|91773335|ref|YP_566027.1| - 0.038 13.9 0.0 0.17 11.8 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain Mrr_N PF14338.6 gi|91773335|ref|YP_566027.1| - 0.049 13.8 0.1 0.32 11.1 0.1 2.2 1 1 0 1 1 1 0 Mrr N-terminal domain FaeA PF04703.12 gi|91773335|ref|YP_566027.1| - 0.056 13.8 0.2 0.16 12.4 0.0 1.9 2 0 0 2 2 1 0 FaeA-like protein HU-DNA_bdg PF14848.6 gi|91773335|ref|YP_566027.1| - 0.089 12.8 0.1 0.23 11.5 0.1 1.7 1 1 0 1 1 1 0 DNA-binding domain HTH_AsnC-type PF13404.6 gi|91773335|ref|YP_566027.1| - 0.1 12.5 0.0 0.24 11.2 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_13 PF11972.8 gi|91773335|ref|YP_566027.1| - 0.12 12.5 0.0 0.28 11.3 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain Metallophos_2 PF12850.7 gi|91773336|ref|YP_566028.1| - 2e-29 102.9 0.0 2.3e-29 102.7 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|91773336|ref|YP_566028.1| - 2e-05 25.2 0.5 0.034 14.6 0.1 2.2 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase NTR PF01759.21 gi|91773338|ref|YP_566030.1| - 0.00055 19.7 3.2 0.37 10.6 0.1 3.3 4 2 0 4 4 4 2 UNC-6/NTR/C345C module Na_H_Exchanger PF00999.21 gi|91773339|ref|YP_566031.1| - 8.7e-40 136.7 53.9 1.2e-39 136.2 53.9 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|91773339|ref|YP_566031.1| - 1.6e-28 99.3 0.6 3e-28 98.4 0.6 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|91773339|ref|YP_566031.1| - 9.1e-13 47.8 0.3 2.3e-12 46.5 0.3 1.8 1 0 0 1 1 1 1 TrkA-C domain NAD_binding_7 PF13241.6 gi|91773339|ref|YP_566031.1| - 8.3e-07 29.4 1.8 8.5e-07 29.4 0.4 1.7 2 0 0 2 2 1 1 Putative NAD(P)-binding ApbA PF02558.16 gi|91773339|ref|YP_566031.1| - 1.2e-05 24.9 0.4 2.8e-05 23.8 0.2 1.7 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 gi|91773339|ref|YP_566031.1| - 0.00043 20.5 0.1 0.0009 19.4 0.1 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|91773339|ref|YP_566031.1| - 0.00047 20.4 0.2 0.00096 19.4 0.2 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|91773339|ref|YP_566031.1| - 0.00061 20.3 0.6 0.0021 18.6 0.1 2.2 2 1 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent NmrA PF05368.13 gi|91773339|ref|YP_566031.1| - 0.00072 19.2 0.5 0.00072 19.2 0.5 1.9 2 0 0 2 2 2 1 NmrA-like family FAD_binding_3 PF01494.19 gi|91773339|ref|YP_566031.1| - 0.0011 18.3 0.0 0.0015 17.8 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|91773339|ref|YP_566031.1| - 0.0011 18.5 0.3 0.0027 17.3 0.3 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_10 PF13460.6 gi|91773339|ref|YP_566031.1| - 0.0014 18.6 0.2 0.0023 17.9 0.2 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Shikimate_DH PF01488.20 gi|91773339|ref|YP_566031.1| - 0.0027 17.8 0.8 0.013 15.6 0.2 2.2 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Pyr_redox_2 PF07992.14 gi|91773339|ref|YP_566031.1| - 0.0062 15.8 0.3 0.011 15.0 0.3 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|91773339|ref|YP_566031.1| - 0.01 16.4 0.6 0.028 15.0 0.6 1.9 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 gi|91773339|ref|YP_566031.1| - 0.031 14.8 0.0 0.07 13.6 0.0 1.6 1 0 0 1 1 1 0 XdhC Rossmann domain 3HCDH_N PF02737.18 gi|91773339|ref|YP_566031.1| - 0.032 14.1 0.1 0.06 13.2 0.1 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Epimerase PF01370.21 gi|91773339|ref|YP_566031.1| - 0.044 13.2 0.2 0.07 12.6 0.2 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family HI0933_like PF03486.14 gi|91773339|ref|YP_566031.1| - 0.049 12.3 0.1 0.069 11.8 0.1 1.3 1 0 0 1 1 1 0 HI0933-like protein NAD_Gly3P_dh_N PF01210.23 gi|91773339|ref|YP_566031.1| - 0.097 12.6 0.2 0.27 11.2 0.0 1.9 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RrnaAD PF00398.20 gi|91773339|ref|YP_566031.1| - 0.14 11.2 0.0 0.22 10.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase B12-binding PF02310.19 gi|91773340|ref|YP_566032.1| - 2e-27 95.6 0.4 4.2e-27 94.6 0.4 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|91773340|ref|YP_566032.1| - 4.9e-19 68.5 0.7 4.9e-19 68.5 0.7 1.9 3 0 0 3 3 3 1 B12 binding domain EamA PF00892.20 gi|91773342|ref|YP_566034.1| - 8.3e-14 51.9 46.1 2.1e-06 27.9 14.3 3.1 2 1 0 2 2 2 2 EamA-like transporter family B12-binding_2 PF02607.17 gi|91773343|ref|YP_566035.1| - 1e-20 73.9 1.4 2.1e-20 72.9 1.1 1.7 2 0 0 2 2 2 1 B12 binding domain B12-binding PF02310.19 gi|91773343|ref|YP_566035.1| - 5.7e-20 71.6 1.2 5.7e-20 71.6 1.2 2.1 3 0 0 3 3 3 1 B12 binding domain EspB PF05802.11 gi|91773343|ref|YP_566035.1| - 2.4 8.1 8.7 1.5 8.8 1.7 2.6 2 1 1 3 3 3 0 Enterobacterial EspB protein RACo_C_ter PF14574.6 gi|91773344|ref|YP_566036.1| - 5.1e-68 228.9 9.1 2.4e-67 226.8 9.1 1.9 1 1 0 1 1 1 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|91773344|ref|YP_566036.1| - 6.4e-12 45.5 0.0 2.3e-11 43.7 0.0 2.0 2 0 0 2 2 2 1 RACo middle region Fer4_21 PF14697.6 gi|91773344|ref|YP_566036.1| - 2.1e-10 40.6 9.7 3.9e-10 39.7 9.0 1.8 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773344|ref|YP_566036.1| - 6.6e-09 36.2 10.1 1.4e-08 35.2 10.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91773344|ref|YP_566036.1| - 7.9e-09 35.0 14.9 0.00014 21.6 5.1 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|91773344|ref|YP_566036.1| - 1.4e-07 31.2 15.7 0.00012 22.0 2.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773344|ref|YP_566036.1| - 2.6e-07 30.7 9.7 5.5e-07 29.7 9.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91773344|ref|YP_566036.1| - 1.7e-05 25.3 3.5 0.0029 18.1 0.2 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91773344|ref|YP_566036.1| - 3.5e-05 23.8 12.0 0.00049 20.2 12.9 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91773344|ref|YP_566036.1| - 4e-05 24.5 11.7 0.035 15.0 1.7 2.6 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|91773344|ref|YP_566036.1| - 0.00011 22.4 13.4 0.073 13.6 2.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|91773344|ref|YP_566036.1| - 0.0014 18.6 15.0 0.032 14.3 3.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|91773344|ref|YP_566036.1| - 0.0053 17.6 16.4 0.36 11.9 4.7 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91773344|ref|YP_566036.1| - 0.0075 16.7 11.4 0.16 12.4 2.4 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773344|ref|YP_566036.1| - 10 6.8 11.1 34 5.1 11.1 1.9 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|91773344|ref|YP_566036.1| - 10 7.1 11.1 17 6.4 1.1 2.5 1 1 2 3 3 2 0 4Fe-4S dicluster domain S19 PF06756.11 gi|91773347|ref|YP_566039.1| - 0.017 15.0 0.0 0.04 13.9 0.0 1.6 1 0 0 1 1 1 0 Chorion protein S19 C-terminal RPA_C PF08784.11 gi|91773347|ref|YP_566039.1| - 0.03 15.0 0.0 0.11 13.2 0.0 1.8 2 0 0 2 2 2 0 Replication protein A C terminal RMI2 PF16100.5 gi|91773347|ref|YP_566039.1| - 0.054 13.3 0.0 0.08 12.8 0.0 1.3 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 tRNA_anti-codon PF01336.25 gi|91773348|ref|YP_566040.1| - 4.4e-09 36.2 2.6 0.1 12.6 0.0 3.6 4 0 0 4 4 4 3 OB-fold nucleic acid binding domain CBFD_NFYB_HMF PF00808.23 gi|91773349|ref|YP_566041.1| - 8.6e-16 58.0 0.2 9.5e-16 57.8 0.2 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|91773349|ref|YP_566041.1| - 2.2e-09 37.8 0.1 2.4e-09 37.7 0.1 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 gi|91773349|ref|YP_566041.1| - 3.8e-08 33.4 0.0 4.2e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TFIID-31kDa PF02291.15 gi|91773349|ref|YP_566041.1| - 1e-07 32.1 0.0 1.2e-07 31.9 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit CENP-S PF15630.6 gi|91773349|ref|YP_566041.1| - 5.8e-07 29.8 0.0 6.8e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 CENP-S protein Bromo_TP PF07524.13 gi|91773349|ref|YP_566041.1| - 1.4e-05 25.0 0.0 1.8e-05 24.7 0.0 1.0 1 0 0 1 1 1 1 Bromodomain associated AAA_lid_2 PF17863.1 gi|91773349|ref|YP_566041.1| - 0.035 13.9 0.0 0.28 11.0 0.0 2.0 2 0 0 2 2 2 0 AAA lid domain TFIID_20kDa PF03847.13 gi|91773349|ref|YP_566041.1| - 0.073 13.6 0.0 0.089 13.3 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Sm_multidrug_ex PF06695.11 gi|91773350|ref|YP_566042.1| - 1.7e-39 135.2 5.5 2.3e-39 134.8 5.5 1.2 1 0 0 1 1 1 1 Putative small multi-drug export protein SNARE_assoc PF09335.11 gi|91773350|ref|YP_566042.1| - 0.0055 17.2 7.8 0.011 16.2 2.7 2.2 2 0 0 2 2 2 2 SNARE associated Golgi protein Fer4 PF00037.27 gi|91773352|ref|YP_566044.1| - 6.3e-19 66.9 51.4 2.2e-07 30.4 8.2 6.0 6 0 0 6 6 6 4 4Fe-4S binding domain FeS PF04060.13 gi|91773352|ref|YP_566044.1| - 4.6e-14 51.8 5.5 4.6e-14 51.8 5.5 4.4 5 1 1 6 6 6 1 Putative Fe-S cluster Fer4_6 PF12837.7 gi|91773352|ref|YP_566044.1| - 1.9e-13 49.9 47.7 2.8e-05 24.0 0.7 5.8 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91773352|ref|YP_566044.1| - 2.7e-13 50.3 40.0 7.5e-07 29.6 14.8 4.8 2 2 2 4 4 4 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91773352|ref|YP_566044.1| - 8.8e-12 45.0 43.8 4.6e-07 29.9 17.3 4.3 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91773352|ref|YP_566044.1| - 8.8e-12 45.0 31.9 7.2e-07 29.3 16.7 3.7 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773352|ref|YP_566044.1| - 2.6e-08 33.5 53.0 7.5e-05 22.6 2.7 6.1 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91773352|ref|YP_566044.1| - 7.7e-07 30.0 42.7 0.0098 16.8 1.4 5.3 6 0 0 6 6 6 4 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|91773352|ref|YP_566044.1| - 2.2e-06 27.7 59.5 0.0006 19.9 16.4 5.1 1 1 3 4 4 3 3 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91773352|ref|YP_566044.1| - 0.011 16.3 49.2 0.016 15.7 16.3 5.0 2 2 2 5 5 5 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773352|ref|YP_566044.1| - 0.016 15.8 45.2 0.17 12.4 7.3 5.7 4 2 1 5 5 5 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|91773352|ref|YP_566044.1| - 0.018 15.5 0.7 0.018 15.5 0.7 6.4 7 1 0 7 7 7 0 4Fe-4S binding domain NanE PF04131.14 gi|91773352|ref|YP_566044.1| - 0.033 13.4 0.0 0.1 11.8 0.0 1.7 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Fer4_3 PF12798.7 gi|91773352|ref|YP_566044.1| - 0.056 14.4 3.4 0.056 14.4 3.4 6.7 7 0 0 7 7 7 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91773352|ref|YP_566044.1| - 0.07 13.6 46.2 0.051 14.0 15.0 4.5 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|91773352|ref|YP_566044.1| - 0.78 10.6 39.6 0.21 12.5 1.9 5.3 5 1 1 6 6 6 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91773352|ref|YP_566044.1| - 3.4 8.5 44.8 0.22 12.3 4.5 6.3 5 1 2 7 7 7 0 4Fe-4S single cluster domain Rnf-Nqr PF02508.14 gi|91773353|ref|YP_566045.1| - 2e-54 184.2 22.4 2.3e-54 184.0 22.4 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein Rnf-Nqr PF02508.14 gi|91773354|ref|YP_566046.1| - 1.3e-61 207.6 17.4 1.6e-61 207.3 17.4 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein FMN_bind PF04205.14 gi|91773355|ref|YP_566047.1| - 8.6e-15 55.1 1.3 1.5e-14 54.3 1.3 1.4 1 0 0 1 1 1 1 FMN-binding domain NQR2_RnfD_RnfE PF03116.15 gi|91773356|ref|YP_566048.1| - 1.1e-71 241.7 25.7 1.3e-71 241.4 25.7 1.1 1 0 0 1 1 1 1 NQR2, RnfD, RnfE family Complex1_51K PF01512.17 gi|91773357|ref|YP_566049.1| - 8.6e-27 93.9 0.0 1.3e-26 93.3 0.0 1.3 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit RnfC_N PF13375.6 gi|91773357|ref|YP_566049.1| - 4.5e-22 77.9 1.4 1.5e-21 76.2 0.3 2.2 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain SLBB PF10531.9 gi|91773357|ref|YP_566049.1| - 2e-11 43.6 0.8 5.3e-11 42.2 0.8 1.8 1 0 0 1 1 1 1 SLBB domain Fer4_10 PF13237.6 gi|91773357|ref|YP_566049.1| - 3.5e-08 33.4 10.9 1.5e-06 28.2 12.8 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773357|ref|YP_566049.1| - 6.3e-08 33.1 12.2 2.1e-07 31.4 12.2 2.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91773357|ref|YP_566049.1| - 1.2e-06 28.1 14.8 0.0017 18.1 3.7 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773357|ref|YP_566049.1| - 1.5e-06 28.2 12.8 1.8e-05 24.8 13.9 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91773357|ref|YP_566049.1| - 2.1e-06 27.8 10.7 0.0062 17.0 1.7 3.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91773357|ref|YP_566049.1| - 2.5e-06 28.3 9.4 0.011 16.7 2.0 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|91773357|ref|YP_566049.1| - 4.6e-06 26.7 10.5 0.0032 17.6 2.2 2.8 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91773357|ref|YP_566049.1| - 1.1e-05 25.8 11.8 0.0011 19.3 13.8 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773357|ref|YP_566049.1| - 1.3e-05 25.1 14.8 0.011 15.8 2.2 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91773357|ref|YP_566049.1| - 2.8e-05 24.6 12.5 0.00046 20.7 13.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773357|ref|YP_566049.1| - 5.5e-05 23.0 14.3 0.031 14.4 3.2 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|91773357|ref|YP_566049.1| - 0.00027 21.7 7.1 0.058 14.2 2.1 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain NQRA PF05896.11 gi|91773357|ref|YP_566049.1| - 0.0062 16.0 0.0 0.0087 15.5 0.0 1.2 1 0 0 1 1 1 1 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Fer4_3 PF12798.7 gi|91773357|ref|YP_566049.1| - 0.022 15.7 6.2 0.022 15.7 6.2 3.5 4 0 0 4 4 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91773357|ref|YP_566049.1| - 0.081 13.1 21.0 0.091 13.0 2.8 3.4 4 1 1 5 5 4 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|91773357|ref|YP_566049.1| - 1.3 8.8 8.8 2 8.2 0.8 2.5 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Cytochrome_C7 PF14522.6 gi|91773358|ref|YP_566050.1| - 0.0013 18.7 26.0 0.18 11.8 11.4 4.7 3 2 2 5 5 5 4 Cytochrome c7 and related cytochrome c Cytochrom_NNT PF03264.14 gi|91773358|ref|YP_566050.1| - 0.018 14.8 8.3 0.018 14.8 8.3 4.9 3 2 2 5 5 5 0 NapC/NirT cytochrome c family, N-terminal region CCP_MauG PF03150.14 gi|91773358|ref|YP_566050.1| - 0.023 15.4 10.7 17 6.0 0.0 5.7 5 1 0 5 5 5 0 Di-haem cytochrome c peroxidase Cytochrome_C554 PF13435.6 gi|91773358|ref|YP_566050.1| - 0.086 13.8 23.7 0.24 12.3 4.6 5.1 5 0 0 5 5 5 0 Cytochrome c554 and c-prime EF-hand_5 PF13202.6 gi|91773358|ref|YP_566050.1| - 0.13 11.8 0.1 0.29 10.7 0.1 1.6 1 0 0 1 1 1 0 EF hand Cytochrom_c3_2 PF14537.6 gi|91773358|ref|YP_566050.1| - 0.21 12.0 27.0 22 5.6 17.3 4.5 3 2 0 3 3 3 0 Cytochrome c3 Cytochrom_C PF00034.21 gi|91773358|ref|YP_566050.1| - 0.53 11.5 5.8 77 4.5 0.4 4.7 5 0 0 5 5 5 0 Cytochrome c Flocculin_t3 PF13928.6 gi|91773358|ref|YP_566050.1| - 2.3 8.8 6.3 1.3 9.6 2.1 2.5 2 0 0 2 2 2 0 Flocculin type 3 repeat Cytochrome_CBB3 PF13442.6 gi|91773358|ref|YP_566050.1| - 4.5 7.7 20.6 17 5.8 0.0 5.8 4 2 2 6 6 6 0 Cytochrome C oxidase, cbb3-type, subunit III ApbE PF02424.15 gi|91773360|ref|YP_566052.1| - 2.6e-75 253.3 0.1 3e-75 253.1 0.1 1.0 1 0 0 1 1 1 1 ApbE family LigT_PEase PF02834.16 gi|91773361|ref|YP_566053.1| - 2e-27 95.2 0.0 4.8e-16 58.7 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|91773361|ref|YP_566053.1| - 1e-10 41.7 0.0 1.2e-10 41.5 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|91773361|ref|YP_566053.1| - 5.8e-08 32.9 0.0 8.8e-08 32.3 0.0 1.3 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain MIF4G PF02854.19 gi|91773361|ref|YP_566053.1| - 0.018 14.7 0.0 0.025 14.2 0.0 1.2 1 0 0 1 1 1 0 MIF4G domain DisA_N PF02457.16 gi|91773362|ref|YP_566054.1| - 7.9e-21 73.8 2.3 1.8e-20 72.7 0.2 2.5 3 0 0 3 3 3 1 DisA bacterial checkpoint controller nucleotide-binding eRF1_1 PF03463.15 gi|91773363|ref|YP_566055.1| - 3.3e-28 98.2 0.6 5.6e-28 97.5 0.6 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|91773363|ref|YP_566055.1| - 2.7e-24 85.8 0.2 6.9e-24 84.5 0.2 1.7 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|91773363|ref|YP_566055.1| - 1.7e-08 34.9 0.0 3.6e-07 30.6 0.0 2.4 1 1 0 1 1 1 1 eRF1 domain 2 FbpA PF05833.11 gi|91773364|ref|YP_566056.1| - 3e-99 332.8 0.9 3.9e-99 332.5 0.9 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|91773364|ref|YP_566056.1| - 4.7e-28 98.0 0.0 1.6e-27 96.3 0.0 1.9 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 gi|91773364|ref|YP_566056.1| - 1.8e-05 24.9 0.1 6.9e-05 23.0 0.0 2.0 2 0 0 2 2 2 1 NFACT protein RNA binding domain HGD-D PF06050.13 gi|91773364|ref|YP_566056.1| - 0.008 16.0 0.9 0.014 15.2 0.8 1.4 1 1 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component Ribosomal_S13 PF00416.22 gi|91773364|ref|YP_566056.1| - 0.13 12.7 3.1 0.13 12.7 0.0 2.5 3 0 0 3 3 3 0 Ribosomal protein S13/S18 H2TH PF06831.14 gi|91773364|ref|YP_566056.1| - 0.13 12.2 0.0 0.43 10.6 0.0 1.8 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain Hydin_ADK PF17213.3 gi|91773364|ref|YP_566056.1| - 0.23 11.7 1.5 0.46 10.7 0.1 2.0 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain HDV_ag PF01517.18 gi|91773364|ref|YP_566056.1| - 0.78 9.5 2.9 0.33 10.7 0.2 1.7 2 0 0 2 2 2 0 Hepatitis delta virus delta antigen DNA_primase_S PF01896.19 gi|91773365|ref|YP_566057.1| - 7.9e-22 78.1 0.0 1.4e-21 77.4 0.0 1.4 1 0 0 1 1 1 1 DNA primase small subunit HHH_5 PF14520.6 gi|91773365|ref|YP_566057.1| - 0.00052 20.6 0.2 0.0066 17.0 0.1 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain DUF3140 PF11338.8 gi|91773365|ref|YP_566057.1| - 0.016 15.6 0.1 0.031 14.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3140) Sld5 PF05916.11 gi|91773366|ref|YP_566058.1| - 0.031 14.7 0.2 0.07 13.6 0.2 1.6 1 0 0 1 1 1 0 GINS complex protein Ribosomal_L44 PF00935.19 gi|91773367|ref|YP_566059.1| - 8.9e-25 87.0 9.0 1.3e-24 86.4 9.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L44 zinc_ribbon_10 PF10058.9 gi|91773367|ref|YP_566059.1| - 0.058 13.1 0.5 1.7 8.4 0.0 2.2 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein zinc_ribbon_5 PF13719.6 gi|91773367|ref|YP_566059.1| - 0.067 13.0 2.1 6.4 6.6 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_S27e PF01667.17 gi|91773368|ref|YP_566060.1| - 2.8e-23 81.4 0.8 3e-23 81.3 0.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 zf-C2H2_12 PF18658.1 gi|91773368|ref|YP_566060.1| - 0.0033 17.0 0.1 0.0054 16.3 0.0 1.4 1 1 0 1 1 1 1 Zinc-finger C2H2-type FYVE PF01363.21 gi|91773368|ref|YP_566060.1| - 0.0058 16.7 0.5 0.0074 16.4 0.5 1.2 1 0 0 1 1 1 1 FYVE zinc finger Zn_Tnp_IS91 PF14319.6 gi|91773368|ref|YP_566060.1| - 0.0072 16.3 0.2 0.0072 16.3 0.2 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain HypA PF01155.19 gi|91773368|ref|YP_566060.1| - 0.019 15.0 0.4 0.021 14.9 0.4 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Sgf11 PF08209.11 gi|91773368|ref|YP_566060.1| - 0.11 12.0 0.1 0.11 12.0 0.1 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-BED PF02892.15 gi|91773368|ref|YP_566060.1| - 0.13 12.3 4.7 1.7 8.7 4.7 2.0 1 1 0 1 1 1 0 BED zinc finger zinc_ribbon_6 PF14599.6 gi|91773368|ref|YP_566060.1| - 0.15 12.1 2.6 0.27 11.3 2.3 1.7 2 1 0 2 2 2 0 Zinc-ribbon EIF_2_alpha PF07541.12 gi|91773369|ref|YP_566061.1| - 7.7e-24 84.0 0.1 1.4e-23 83.2 0.1 1.4 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|91773369|ref|YP_566061.1| - 6.1e-11 42.5 0.2 6.1e-11 42.5 0.2 1.7 2 0 0 2 2 2 1 S1 RNA binding domain TFIIE_beta PF02186.15 gi|91773369|ref|YP_566061.1| - 0.036 14.4 0.0 0.075 13.3 0.0 1.5 1 0 0 1 1 1 0 TFIIE beta subunit core domain PrlF_antitoxin PF15937.5 gi|91773369|ref|YP_566061.1| - 0.045 14.2 0.0 0.12 12.8 0.0 1.7 1 0 0 1 1 1 0 prlF antitoxin for toxin YhaV_toxin Ribosomal_L27A PF00828.19 gi|91773369|ref|YP_566061.1| - 0.83 10.3 4.5 0.8 10.4 2.5 2.0 2 1 0 2 2 2 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Nop10p PF04135.12 gi|91773370|ref|YP_566062.1| - 1.4e-23 82.6 1.0 1.5e-23 82.5 1.0 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|91773370|ref|YP_566062.1| - 0.0078 15.8 1.8 0.0096 15.5 1.8 1.2 1 0 0 1 1 1 1 RecR protein PolC_DP2 PF03833.13 gi|91773370|ref|YP_566062.1| - 0.01 13.8 0.3 0.01 13.8 0.3 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 zf-tcix PF14952.6 gi|91773370|ref|YP_566062.1| - 0.13 11.9 5.1 3.4 7.4 0.4 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding PAC2 PF09754.9 gi|91773371|ref|YP_566063.1| - 1.9e-52 178.4 0.1 2.2e-52 178.1 0.1 1.1 1 0 0 1 1 1 1 PAC2 family Cyclophil_like2 PF18050.1 gi|91773371|ref|YP_566063.1| - 0.053 13.5 0.2 0.81 9.7 0.0 2.2 2 0 0 2 2 2 0 Cyclophilin-like family BLOC1_2 PF10046.9 gi|91773371|ref|YP_566063.1| - 0.057 13.7 0.7 0.12 12.6 0.7 1.5 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 NAD_binding_10 PF13460.6 gi|91773371|ref|YP_566063.1| - 0.1 12.5 0.0 0.56 10.1 0.0 2.2 2 1 0 2 2 2 0 NAD(P)H-binding PHP_C PF13263.6 gi|91773372|ref|YP_566064.1| - 0.0015 18.2 0.0 0.0065 16.2 0.0 2.0 2 0 0 2 2 2 1 PHP-associated PHP PF02811.19 gi|91773372|ref|YP_566064.1| - 0.019 15.2 0.2 0.03 14.6 0.2 1.4 1 1 0 1 1 1 0 PHP domain Reprolysin_5 PF13688.6 gi|91773373|ref|YP_566065.1| - 9.4e-08 32.4 0.0 1.4e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_3 PF13582.6 gi|91773373|ref|YP_566065.1| - 1e-05 26.1 0.0 2.1e-05 25.0 0.0 1.6 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Pep_M12B_propep PF01562.19 gi|91773373|ref|YP_566065.1| - 0.0006 20.1 0.0 0.00098 19.4 0.0 1.3 1 0 0 1 1 1 1 Reprolysin family propeptide Peptidase_M57 PF12388.8 gi|91773373|ref|YP_566065.1| - 0.025 14.2 0.1 0.05 13.2 0.1 1.4 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Reprolysin_4 PF13583.6 gi|91773373|ref|YP_566065.1| - 0.035 13.7 0.0 0.11 12.1 0.0 1.8 2 0 0 2 2 2 0 Metallo-peptidase family M12B Reprolysin-like fn3_5 PF06280.12 gi|91773375|ref|YP_566067.1| - 0.088 13.5 0.0 0.12 13.1 0.0 1.2 1 0 0 1 1 1 0 Fn3-like domain Virul_fac_BrkB PF03631.15 gi|91773378|ref|YP_566070.1| - 1.2e-47 162.7 28.5 1.6e-47 162.3 28.5 1.1 1 0 0 1 1 1 1 Virulence factor BrkB DUF1508 PF07411.12 gi|91773379|ref|YP_566071.1| - 1.4e-24 85.7 0.2 1.7e-24 85.4 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1508) CarboxypepD_reg PF13620.6 gi|91773379|ref|YP_566071.1| - 0.0021 18.3 0.0 0.0022 18.2 0.0 1.2 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|91773379|ref|YP_566071.1| - 0.0068 16.4 0.0 0.0071 16.3 0.0 1.2 1 0 0 1 1 1 1 CarboxypepD_reg-like domain ACI44 PF15270.6 gi|91773379|ref|YP_566071.1| - 0.084 13.1 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Metallo-carboxypeptidase inhibitor Inhibitor_I42 PF09394.10 gi|91773380|ref|YP_566072.1| - 3.1e-24 85.2 0.1 8.9e-24 83.7 0.1 1.8 2 0 0 2 2 2 1 Chagasin family peptidase inhibitor I42 UPF0052 PF01933.18 gi|91773381|ref|YP_566073.1| - 5.2e-47 160.5 0.1 6.2e-47 160.2 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 HD PF01966.22 gi|91773382|ref|YP_566074.1| - 1.1e-13 51.4 2.9 1.1e-13 51.4 2.9 2.6 2 1 0 2 2 2 1 HD domain HDOD PF08668.12 gi|91773382|ref|YP_566074.1| - 0.00074 19.1 0.0 0.0018 17.8 0.0 1.7 1 0 0 1 1 1 1 HDOD domain Prot_ATP_OB_N PF17758.1 gi|91773382|ref|YP_566074.1| - 0.084 12.5 0.0 0.25 11.0 0.0 1.7 1 0 0 1 1 1 0 Proteasomal ATPase OB N-terminal domain DUF2482 PF10655.9 gi|91773382|ref|YP_566074.1| - 0.15 12.6 0.9 0.35 11.4 0.1 2.1 2 0 0 2 2 2 0 Hypothetical protein of unknown function (DUF2482) DAGK_cat PF00781.24 gi|91773383|ref|YP_566075.1| - 0.1 12.2 0.3 0.16 11.6 0.3 1.4 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain Flavoprotein PF02441.19 gi|91773384|ref|YP_566076.1| - 1.7e-27 96.1 0.1 1.9e-27 95.9 0.1 1.0 1 0 0 1 1 1 1 Flavoprotein ThiS PF02597.20 gi|91773385|ref|YP_566077.1| - 8.1e-21 74.5 0.2 1e-20 74.1 0.2 1.1 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.11 gi|91773385|ref|YP_566077.1| - 0.022 15.1 0.2 0.026 14.9 0.2 1.2 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) DUF4279 PF14106.6 gi|91773385|ref|YP_566077.1| - 0.047 13.9 0.1 0.065 13.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4279) CRCB PF02537.15 gi|91773386|ref|YP_566078.1| - 1.7e-21 76.3 10.3 2.3e-21 75.9 10.3 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) DUF3021 PF11457.8 gi|91773386|ref|YP_566078.1| - 0.024 15.0 6.1 0.028 14.7 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF190 PF02641.15 gi|91773387|ref|YP_566079.1| - 4.7e-35 119.8 0.4 5.3e-35 119.6 0.4 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1993 CRS1_YhbY PF01985.21 gi|91773388|ref|YP_566080.1| - 9.6e-20 70.5 0.8 1.1e-19 70.4 0.8 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain ATPase PF06745.13 gi|91773389|ref|YP_566081.1| - 3.2e-09 36.5 0.1 4.1e-09 36.1 0.1 1.1 1 0 0 1 1 1 1 KaiC DUF835 PF05763.12 gi|91773389|ref|YP_566081.1| - 0.00041 20.1 0.0 0.001 18.8 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF835) PAXNEB PF05625.11 gi|91773389|ref|YP_566081.1| - 0.0005 19.3 0.7 0.00069 18.9 0.0 1.6 2 0 0 2 2 2 1 PAXNEB protein AAA_35 PF14516.6 gi|91773389|ref|YP_566081.1| - 0.0026 16.7 0.0 0.0045 15.9 0.0 1.3 1 1 0 1 1 1 1 AAA-like domain DnaB_C PF03796.15 gi|91773389|ref|YP_566081.1| - 0.033 13.5 0.0 0.044 13.1 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain ATP-synt_ab PF00006.25 gi|91773389|ref|YP_566081.1| - 0.051 13.2 0.0 0.074 12.7 0.0 1.4 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain MoCF_biosynth PF00994.24 gi|91773390|ref|YP_566082.1| - 3.7e-34 117.4 0.2 4.4e-34 117.2 0.2 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain Ribosomal_L16 PF00252.18 gi|91773391|ref|YP_566083.1| - 9.9e-33 112.9 0.7 1.2e-32 112.6 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e eIF-5_eIF-2B PF01873.17 gi|91773392|ref|YP_566084.1| - 6.1e-39 132.5 0.0 8.6e-39 132.0 0.0 1.2 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.20 gi|91773392|ref|YP_566084.1| - 6.4e-11 42.1 0.4 1.3e-10 41.1 0.4 1.6 1 0 0 1 1 1 1 TRAM domain YscJ_FliF PF01514.17 gi|91773392|ref|YP_566084.1| - 0.014 15.1 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 Secretory protein of YscJ/FliF family AsnC_trans_reg PF01037.21 gi|91773392|ref|YP_566084.1| - 0.09 12.7 0.0 0.47 10.4 0.0 2.0 2 0 0 2 2 2 0 Lrp/AsnC ligand binding domain ZF-HD_dimer PF04770.12 gi|91773392|ref|YP_566084.1| - 0.21 12.0 1.2 0.48 10.8 1.4 1.6 1 1 0 1 1 1 0 ZF-HD protein dimerisation region ATPase PF06745.13 gi|91773393|ref|YP_566085.1| - 1.2e-05 24.8 0.0 1.3e-05 24.7 0.0 1.0 1 0 0 1 1 1 1 KaiC Radical_SAM PF04055.21 gi|91773394|ref|YP_566086.1| - 2.4e-14 54.0 0.1 3.8e-14 53.4 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|91773394|ref|YP_566086.1| - 3.9e-07 30.5 0.2 9.7e-07 29.2 0.2 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|91773394|ref|YP_566086.1| - 0.00098 19.4 0.0 0.0021 18.3 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|91773394|ref|YP_566086.1| - 0.0015 18.7 0.1 0.0042 17.2 0.1 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Peripla_BP_4 PF13407.6 gi|91773394|ref|YP_566086.1| - 0.1 12.1 0.1 1.6 8.2 0.1 2.0 1 1 0 1 1 1 0 Periplasmic binding protein domain QCR10 PF09796.9 gi|91773394|ref|YP_566086.1| - 0.1 12.6 0.0 0.32 11.1 0.0 1.7 2 0 0 2 2 2 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) NAD_binding_2 PF03446.15 gi|91773394|ref|YP_566086.1| - 0.11 12.7 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase POT1 PF02765.17 gi|91773394|ref|YP_566086.1| - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 Methyltrans_RNA PF04452.14 gi|91773394|ref|YP_566086.1| - 0.12 11.7 0.0 0.36 10.1 0.0 1.7 2 0 0 2 2 2 0 RNA methyltransferase IDEAL PF08858.10 gi|91773394|ref|YP_566086.1| - 0.18 11.6 0.1 0.45 10.3 0.1 1.7 1 0 0 1 1 1 0 IDEAL domain tRNA-synt_1b PF00579.25 gi|91773395|ref|YP_566087.1| - 1.2e-36 126.5 0.0 1.2e-20 74.0 0.0 2.0 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) tRNA-synt_2d PF01409.20 gi|91773396|ref|YP_566088.1| - 5.4e-93 311.0 0.0 7.3e-93 310.6 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|91773396|ref|YP_566088.1| - 1.6e-09 37.5 0.0 2.5e-06 27.1 0.0 2.5 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 gi|91773396|ref|YP_566088.1| - 0.00078 18.6 0.4 0.031 13.4 0.1 2.9 3 0 0 3 3 3 1 tRNA synthetases class II (D, K and N) DUF1495 PF07381.11 gi|91773396|ref|YP_566088.1| - 0.0055 16.5 0.1 0.81 9.6 0.0 3.0 3 0 0 3 3 3 1 Winged helix DNA-binding domain (DUF1495) Mrr_N PF14338.6 gi|91773396|ref|YP_566088.1| - 0.079 13.1 0.3 7.1 6.8 0.1 2.8 2 0 0 2 2 2 0 Mrr N-terminal domain HTH_45 PF14947.6 gi|91773396|ref|YP_566088.1| - 0.14 12.2 1.5 1 9.4 0.3 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix TrmB PF01978.19 gi|91773396|ref|YP_566088.1| - 0.19 11.7 0.2 0.56 10.1 0.1 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF362 PF04015.12 gi|91773397|ref|YP_566089.1| - 5.9e-48 163.8 0.3 7.3e-48 163.5 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|91773397|ref|YP_566089.1| - 1.5e-08 34.1 11.9 0.00024 20.8 4.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91773397|ref|YP_566089.1| - 8e-06 26.4 11.6 1.6e-05 25.4 11.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773397|ref|YP_566089.1| - 1e-05 25.3 13.1 0.0055 16.7 2.2 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91773397|ref|YP_566089.1| - 3.8e-05 23.7 11.5 6.5e-05 23.0 11.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773397|ref|YP_566089.1| - 0.00023 21.1 11.6 0.0016 18.4 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773397|ref|YP_566089.1| - 0.00034 20.7 13.0 0.00058 20.0 13.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91773397|ref|YP_566089.1| - 0.001 19.1 14.4 0.0035 17.4 14.8 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91773397|ref|YP_566089.1| - 0.009 16.5 8.0 0.6 10.7 2.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91773397|ref|YP_566089.1| - 0.037 15.0 12.0 1.2 10.1 3.0 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|91773397|ref|YP_566089.1| - 0.08 13.7 8.4 0.19 12.5 0.5 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain Lar_N PF09861.9 gi|91773397|ref|YP_566089.1| - 0.15 11.2 0.1 0.21 10.7 0.1 1.2 1 0 0 1 1 1 0 Lactate racemase N-terminal domain Fer4_3 PF12798.7 gi|91773397|ref|YP_566089.1| - 0.26 12.3 19.1 1.9 9.6 6.8 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91773397|ref|YP_566089.1| - 0.37 11.0 6.3 1.4 9.1 6.2 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|91773397|ref|YP_566089.1| - 0.77 9.9 4.6 1.1 9.4 3.6 1.8 2 0 0 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_4 PF12800.7 gi|91773397|ref|YP_566089.1| - 1.3 9.7 16.3 1.3 9.7 2.1 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|91773397|ref|YP_566089.1| - 3.9 8.1 11.2 6.4 7.4 4.0 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|91773397|ref|YP_566089.1| - 6.2 7.3 17.6 12 6.5 5.7 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain DUF531 PF04407.12 gi|91773398|ref|YP_566090.1| - 1.5e-80 269.2 0.0 1.8e-80 269.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF531) SPOUT_MTase_2 PF14419.6 gi|91773398|ref|YP_566090.1| - 0.0094 15.3 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 1 AF2226-like SPOUT RNA Methylase fused to THUMP Acetyltransf_7 PF13508.7 gi|91773399|ref|YP_566091.1| - 8.4e-14 51.8 0.0 1.3e-13 51.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|91773399|ref|YP_566091.1| - 1.9e-11 44.2 0.0 2.4e-11 43.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|91773399|ref|YP_566091.1| - 2e-10 40.7 0.0 3.1e-10 40.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|91773399|ref|YP_566091.1| - 6.2e-05 23.1 0.2 0.00039 20.5 0.2 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|91773399|ref|YP_566091.1| - 0.00062 19.8 0.0 0.00098 19.2 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 gi|91773399|ref|YP_566091.1| - 0.025 14.5 0.0 0.062 13.3 0.0 1.7 1 1 0 1 1 1 0 FR47-like protein GNAT_acetyltr_2 PF13718.6 gi|91773399|ref|YP_566091.1| - 0.071 12.5 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase 2 Acetyltransf_15 PF17013.5 gi|91773399|ref|YP_566091.1| - 0.075 12.5 0.0 0.11 12.0 0.0 1.3 1 1 0 1 1 1 0 Putative acetyl-transferase NAD_synthase PF02540.17 gi|91773400|ref|YP_566092.1| - 6.3e-08 32.0 0.0 3.7e-07 29.5 0.0 2.1 3 0 0 3 3 3 1 NAD synthase Asn_synthase PF00733.21 gi|91773400|ref|YP_566092.1| - 4.2e-07 30.0 0.0 6.2e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 gi|91773400|ref|YP_566092.1| - 1.2e-06 28.1 0.0 1.8e-05 24.4 0.0 2.3 2 1 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|91773400|ref|YP_566092.1| - 9.1e-06 24.7 0.0 0.0014 17.5 0.0 2.3 2 0 0 2 2 2 2 tRNA methyl transferase ThiI PF02568.14 gi|91773400|ref|YP_566092.1| - 0.00014 21.5 0.0 0.00022 20.9 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.20 gi|91773400|ref|YP_566092.1| - 0.014 15.2 0.0 0.039 13.7 0.0 1.8 2 0 0 2 2 2 0 PP-loop family Claudin_3 PF06653.11 gi|91773401|ref|YP_566093.1| - 0.013 15.5 9.3 0.017 15.1 9.3 1.1 1 0 0 1 1 1 0 Tight junction protein, Claudin-like Propeptide_C1 PF08127.13 gi|91773401|ref|YP_566093.1| - 0.021 14.7 0.2 0.036 14.0 0.2 1.3 1 0 0 1 1 1 0 Peptidase family C1 propeptide MIG-14_Wnt-bd PF06664.12 gi|91773401|ref|YP_566093.1| - 0.027 13.7 11.1 0.035 13.3 11.1 1.2 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion Phage_holin_3_6 PF07332.11 gi|91773401|ref|YP_566093.1| - 0.84 9.7 12.4 0.11 12.6 7.1 2.0 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 gi|91773401|ref|YP_566093.1| - 1.3 7.7 8.1 1.5 7.5 8.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) AAA_lid_2 PF17863.1 gi|91773402|ref|YP_566094.1| - 4.2e-23 81.0 0.7 7.7e-23 80.1 0.7 1.5 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 gi|91773402|ref|YP_566094.1| - 2.5e-09 36.8 1.7 7.2e-06 25.5 0.0 3.1 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|91773402|ref|YP_566094.1| - 7.7e-09 35.7 0.1 2e-05 24.6 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|91773402|ref|YP_566094.1| - 8.6e-05 21.7 0.1 0.0005 19.2 0.0 2.1 2 0 0 2 2 2 1 MCM P-loop domain AAA_3 PF07726.11 gi|91773402|ref|YP_566094.1| - 0.00053 19.8 0.0 0.069 13.0 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|91773402|ref|YP_566094.1| - 0.0054 16.5 0.0 0.12 12.0 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_16 PF13191.6 gi|91773402|ref|YP_566094.1| - 0.008 16.6 0.0 0.021 15.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|91773402|ref|YP_566094.1| - 0.085 12.6 0.2 8.1 6.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pribosyltran PF00156.27 gi|91773403|ref|YP_566095.1| - 1.2e-17 63.8 0.2 1.7e-17 63.4 0.2 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|91773403|ref|YP_566095.1| - 0.00089 18.8 0.1 0.0012 18.3 0.1 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase SAM_LFY PF01698.16 gi|91773403|ref|YP_566095.1| - 0.024 14.6 0.0 0.16 11.9 0.0 2.1 2 0 0 2 2 2 0 Floricaula / Leafy protein SAM domain PRTase_2 PF15609.6 gi|91773403|ref|YP_566095.1| - 0.031 13.8 0.1 0.04 13.4 0.1 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase Diphthamide_syn PF01866.17 gi|91773404|ref|YP_566096.1| - 4.5e-83 279.2 0.0 5.2e-83 279.0 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein MTS PF05175.14 gi|91773405|ref|YP_566097.1| - 5.3e-15 55.4 0.0 6.4e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|91773405|ref|YP_566097.1| - 7.2e-15 55.1 0.1 9.7e-15 54.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|91773405|ref|YP_566097.1| - 1.6e-11 44.7 0.1 3.7e-11 43.6 0.1 1.6 2 0 0 2 2 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|91773405|ref|YP_566097.1| - 1.8e-09 37.6 1.3 2.3e-08 34.0 1.3 2.1 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.6 gi|91773405|ref|YP_566097.1| - 3.1e-09 36.8 0.2 5.8e-09 35.9 0.1 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|91773405|ref|YP_566097.1| - 1.1e-05 26.0 0.1 2.9e-05 24.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|91773405|ref|YP_566097.1| - 1.7e-05 24.5 0.0 2.6e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 gi|91773405|ref|YP_566097.1| - 0.00081 19.3 0.0 0.0012 18.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 gi|91773405|ref|YP_566097.1| - 0.0028 17.0 0.0 0.0058 15.9 0.0 1.4 1 1 0 1 1 1 1 N-6 DNA Methylase AviRa PF11599.8 gi|91773405|ref|YP_566097.1| - 0.005 16.3 0.0 0.012 15.1 0.0 1.6 1 1 1 2 2 2 1 RRNA methyltransferase AviRa Methyltransf_15 PF09445.10 gi|91773405|ref|YP_566097.1| - 0.0053 16.3 0.1 0.011 15.3 0.1 1.5 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_12 PF08242.12 gi|91773405|ref|YP_566097.1| - 0.0059 17.3 0.0 0.011 16.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|91773405|ref|YP_566097.1| - 0.027 14.2 0.0 0.036 13.8 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_32 PF13679.6 gi|91773405|ref|YP_566097.1| - 0.029 14.4 0.0 0.037 14.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_18 PF12847.7 gi|91773405|ref|YP_566097.1| - 0.044 13.7 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain FmrO PF07091.11 gi|91773405|ref|YP_566097.1| - 0.2 11.1 0.0 0.48 9.9 0.0 1.5 1 1 1 2 2 2 0 Ribosomal RNA methyltransferase (FmrO) ECR1_N PF14382.6 gi|91773406|ref|YP_566098.1| - 3.8e-09 36.2 0.1 7.2e-09 35.3 0.1 1.5 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region Prok-RING_1 PF14446.6 gi|91773406|ref|YP_566098.1| - 0.00021 21.2 0.7 0.00041 20.2 0.7 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 HypA PF01155.19 gi|91773406|ref|YP_566098.1| - 0.0011 19.0 1.6 0.0015 18.5 0.2 1.9 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 gi|91773406|ref|YP_566098.1| - 0.0012 18.8 1.7 0.0029 17.5 1.7 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain EXOSC1 PF10447.9 gi|91773406|ref|YP_566098.1| - 0.0016 19.0 1.6 0.0016 19.0 1.6 2.7 2 2 1 3 3 3 1 Exosome component EXOSC1/CSL4 zf-RING_7 PF02591.15 gi|91773406|ref|YP_566098.1| - 0.0023 18.1 3.0 0.0096 16.1 0.2 2.3 1 1 1 2 2 2 1 C4-type zinc ribbon domain DZR PF12773.7 gi|91773406|ref|YP_566098.1| - 0.0032 17.5 0.6 0.0055 16.7 0.6 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|91773406|ref|YP_566098.1| - 0.0045 16.6 2.4 0.0085 15.8 2.4 1.5 1 0 0 1 1 1 1 zinc-ribbon domain S1 PF00575.23 gi|91773406|ref|YP_566098.1| - 0.0097 16.2 10.9 0.021 15.2 4.8 2.9 2 1 0 2 2 2 1 S1 RNA binding domain TackOD1 PF18551.1 gi|91773406|ref|YP_566098.1| - 0.012 15.3 0.1 0.018 14.7 0.1 1.3 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 DUF1451 PF07295.11 gi|91773406|ref|YP_566098.1| - 0.016 15.3 0.2 0.016 15.3 0.2 1.8 2 0 0 2 2 2 0 Zinc-ribbon containing domain TF_Zn_Ribbon PF08271.12 gi|91773406|ref|YP_566098.1| - 0.017 14.6 1.1 1.4 8.5 0.1 2.8 2 0 0 2 2 2 0 TFIIB zinc-binding YscO-like PF16789.5 gi|91773406|ref|YP_566098.1| - 0.024 14.7 6.4 0.024 14.7 6.4 1.8 2 0 0 2 2 2 0 YscO-like protein NOB1_Zn_bind PF08772.11 gi|91773406|ref|YP_566098.1| - 0.051 13.7 0.2 0.4 10.9 0.3 2.2 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like HupF_HypC PF01455.18 gi|91773406|ref|YP_566098.1| - 0.085 13.0 2.0 6.8 6.9 0.2 3.3 2 1 1 3 3 3 0 HupF/HypC family zf-ribbon_3 PF13248.6 gi|91773406|ref|YP_566098.1| - 0.11 11.9 4.7 0.43 10.0 4.7 1.9 1 1 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|91773406|ref|YP_566098.1| - 0.12 12.5 4.1 0.58 10.3 4.3 2.0 1 1 1 2 2 2 0 Zinc ribbon domain C1_1 PF00130.22 gi|91773406|ref|YP_566098.1| - 0.17 11.8 0.8 0.29 11.1 0.8 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DNA_RNApol_7kD PF03604.13 gi|91773406|ref|YP_566098.1| - 0.19 11.4 2.9 0.48 10.1 2.9 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit HalOD2 PF18547.1 gi|91773406|ref|YP_566098.1| - 0.23 11.4 1.5 3.1 7.8 0.2 2.2 1 1 1 2 2 2 0 Halobacterial output domain 2 PhnA_Zn_Ribbon PF08274.12 gi|91773406|ref|YP_566098.1| - 0.36 10.8 2.2 0.8 9.7 2.2 1.6 1 1 0 1 1 1 0 PhnA Zinc-Ribbon zf-ACC PF17848.1 gi|91773406|ref|YP_566098.1| - 0.62 10.2 3.5 19 5.5 0.2 2.5 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf-ISL3 PF14690.6 gi|91773406|ref|YP_566098.1| - 1.1 10.0 3.9 19 6.0 0.5 2.5 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF678 PF05077.12 gi|91773406|ref|YP_566098.1| - 8.6 6.6 9.0 0.92 9.7 0.3 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF678) RNA_pol_L_2 PF13656.6 gi|91773407|ref|YP_566099.1| - 1.6e-18 66.3 0.6 2e-18 65.9 0.6 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|91773407|ref|YP_566099.1| - 0.00016 21.0 0.2 0.00029 20.2 0.2 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain SepSecS PF05889.13 gi|91773408|ref|YP_566100.1| - 2.4e-45 154.9 0.0 8.7e-45 153.1 0.0 1.8 1 1 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_5 PF00266.19 gi|91773408|ref|YP_566100.1| - 8.7e-17 61.1 0.0 1.3e-16 60.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|91773408|ref|YP_566100.1| - 2.3e-12 46.8 0.0 3.2e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|91773408|ref|YP_566100.1| - 9e-05 21.9 0.0 0.00014 21.3 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 gi|91773408|ref|YP_566100.1| - 0.00034 19.5 0.0 0.00067 18.5 0.0 1.4 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Pyridoxal_deC PF00282.19 gi|91773408|ref|YP_566100.1| - 0.0063 15.3 0.0 0.0091 14.8 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Adenine_glyco PF03352.13 gi|91773409|ref|YP_566101.1| - 3e-15 56.4 1.5 9.3e-14 51.6 1.5 2.1 1 1 0 1 1 1 1 Methyladenine glycosylase EndIII_4Fe-2S PF10576.9 gi|91773409|ref|YP_566101.1| - 0.042 14.2 2.0 0.077 13.4 2.0 1.4 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III HhH-GPD PF00730.25 gi|91773409|ref|YP_566101.1| - 0.084 13.3 0.0 0.15 12.5 0.0 1.4 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein HicB_lk_antitox PF15919.5 gi|91773410|ref|YP_566102.1| - 3.2e-07 30.5 0.1 3.2e-07 30.5 0.1 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system SBP_bac_11 PF13531.6 gi|91773411|ref|YP_566103.1| - 2.4e-44 151.8 0.0 2.7e-44 151.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|91773411|ref|YP_566103.1| - 8.4e-10 39.1 0.2 9e-05 22.6 0.0 2.1 1 1 0 2 2 2 2 Bacterial extracellular solute-binding protein Phosphonate-bd PF12974.7 gi|91773411|ref|YP_566103.1| - 2.1e-08 34.1 0.1 2.9e-08 33.6 0.1 1.3 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_6 PF13343.6 gi|91773411|ref|YP_566103.1| - 0.00054 19.5 0.0 0.00079 18.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.20 gi|91773411|ref|YP_566103.1| - 0.058 12.8 0.1 0.11 11.9 0.1 1.4 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 DUF5357 PF17310.2 gi|91773411|ref|YP_566103.1| - 0.064 11.8 0.4 0.1 11.1 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5357) PBP_like_2 PF12849.7 gi|91773411|ref|YP_566103.1| - 0.097 12.3 0.1 0.16 11.7 0.1 1.5 1 1 0 1 1 1 0 PBP superfamily domain ABC2_membrane_3 PF12698.7 gi|91773411|ref|YP_566103.1| - 0.11 11.6 4.8 0.21 10.6 4.9 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein Pilin_N PF07790.11 gi|91773411|ref|YP_566103.1| - 0.22 12.5 3.2 1.8 9.5 3.2 2.4 1 1 0 1 1 1 0 Archaeal Type IV pilin, N-terminal TRAM PF01938.20 gi|91773412|ref|YP_566104.1| - 1.2e-17 63.7 1.4 1.3e-17 63.6 1.4 1.0 1 0 0 1 1 1 1 TRAM domain DUF772 PF05598.11 gi|91773413|ref|YP_566105.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91773413|ref|YP_566105.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91773413|ref|YP_566105.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91773413|ref|YP_566105.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91773413|ref|YP_566105.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease Methyltransf_12 PF08242.12 gi|91773414|ref|YP_566106.1| - 9.2e-14 52.0 0.0 1.5e-13 51.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91773414|ref|YP_566106.1| - 1.3e-13 51.5 0.0 2.5e-13 50.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|91773414|ref|YP_566106.1| - 2.2e-12 47.5 0.0 3.7e-12 46.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91773414|ref|YP_566106.1| - 1.7e-09 37.6 0.0 2.2e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|91773414|ref|YP_566106.1| - 6.1e-05 22.5 0.0 8.6e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|91773414|ref|YP_566106.1| - 0.00031 20.6 0.0 0.00035 20.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|91773414|ref|YP_566106.1| - 0.00072 18.9 0.0 0.00099 18.5 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain CMAS PF02353.20 gi|91773414|ref|YP_566106.1| - 0.011 15.1 0.0 0.015 14.6 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Pet127 PF08634.10 gi|91773414|ref|YP_566106.1| - 0.092 12.2 0.0 0.42 10.0 0.0 2.0 2 0 0 2 2 2 0 Mitochondrial protein Pet127 UPF0029 PF01205.19 gi|91773415|ref|YP_566107.1| - 4.8e-30 104.0 0.0 6.7e-30 103.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF1949 PF09186.11 gi|91773415|ref|YP_566107.1| - 8.5e-12 44.8 0.0 1.5e-11 43.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1949) Aldo_ket_red PF00248.21 gi|91773416|ref|YP_566108.1| - 2.1e-37 128.9 0.1 1e-35 123.4 0.1 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|91773416|ref|YP_566108.1| - 1.5e-10 41.5 7.7 3.2e-10 40.4 7.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91773416|ref|YP_566108.1| - 3.5e-10 39.9 6.8 6.7e-10 39.0 6.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91773416|ref|YP_566108.1| - 4.6e-07 30.0 5.9 0.0011 19.1 0.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91773416|ref|YP_566108.1| - 1.5e-06 28.5 6.3 3.5e-06 27.4 6.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91773416|ref|YP_566108.1| - 0.00026 20.7 2.0 0.00026 20.7 2.0 2.8 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91773416|ref|YP_566108.1| - 0.0003 20.8 11.5 0.003 17.6 12.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91773416|ref|YP_566108.1| - 0.0012 18.9 5.0 0.14 12.3 0.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773416|ref|YP_566108.1| - 0.01 15.9 12.4 0.076 13.1 2.6 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|91773416|ref|YP_566108.1| - 0.011 15.5 9.8 0.075 12.8 2.2 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_22 PF17179.4 gi|91773416|ref|YP_566108.1| - 0.014 16.2 2.7 1.2 10.0 0.1 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773416|ref|YP_566108.1| - 0.017 15.2 2.1 0.017 15.2 2.1 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91773416|ref|YP_566108.1| - 0.03 14.9 14.5 0.48 11.0 14.6 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773416|ref|YP_566108.1| - 0.21 12.2 0.3 0.21 12.2 0.3 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 gi|91773416|ref|YP_566108.1| - 2.5 9.1 14.8 1.5 9.9 3.5 2.5 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|91773416|ref|YP_566108.1| - 3.8 8.3 17.9 0.15 12.6 2.7 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain HATPase_c PF02518.26 gi|91773417|ref|YP_566109.1| - 3e-10 40.6 0.1 3.1e-10 40.5 0.1 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cyt-b5 PF00173.28 gi|91773418|ref|YP_566110.1| - 2.7e-11 43.4 0.5 3.5e-11 43.1 0.5 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain PALP PF00291.25 gi|91773419|ref|YP_566111.1| - 6.1e-36 124.3 0.0 7.8e-36 124.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme AIRC PF00731.20 gi|91773419|ref|YP_566111.1| - 0.17 11.5 0.0 0.31 10.6 0.0 1.4 1 0 0 1 1 1 0 AIR carboxylase ABC_tran PF00005.27 gi|91773420|ref|YP_566112.1| - 1.6e-14 54.6 0.0 2.4e-14 54.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773420|ref|YP_566112.1| - 2.5e-09 37.4 0.8 0.00042 20.2 0.0 2.9 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|91773420|ref|YP_566112.1| - 7.6e-06 25.6 0.0 1.8e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|91773420|ref|YP_566112.1| - 0.00012 22.7 0.0 0.00016 22.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|91773420|ref|YP_566112.1| - 0.00013 22.0 0.1 0.00069 19.6 0.0 1.9 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|91773420|ref|YP_566112.1| - 0.00023 21.4 0.1 0.0013 19.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|91773420|ref|YP_566112.1| - 0.0003 21.2 0.0 0.00049 20.5 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|91773420|ref|YP_566112.1| - 0.00061 19.3 0.4 0.085 12.3 0.4 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|91773420|ref|YP_566112.1| - 0.0025 17.6 0.0 0.0072 16.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain NB-ARC PF00931.22 gi|91773420|ref|YP_566112.1| - 0.0048 16.1 0.0 0.0099 15.1 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain T2SSE PF00437.20 gi|91773420|ref|YP_566112.1| - 0.0049 16.0 0.0 0.008 15.3 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein cobW PF02492.19 gi|91773420|ref|YP_566112.1| - 0.017 14.8 0.1 0.053 13.1 0.0 1.9 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|91773420|ref|YP_566112.1| - 0.023 15.3 0.0 0.067 13.7 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|91773420|ref|YP_566112.1| - 0.024 14.6 0.1 1.2 9.1 0.0 2.5 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 gi|91773420|ref|YP_566112.1| - 0.03 14.2 0.0 0.064 13.2 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase DEAD PF00270.29 gi|91773420|ref|YP_566112.1| - 0.032 14.0 0.0 0.067 12.9 0.0 1.6 1 1 1 2 2 2 0 DEAD/DEAH box helicase AAA_14 PF13173.6 gi|91773420|ref|YP_566112.1| - 0.055 13.5 0.0 1.1 9.2 0.0 2.3 2 1 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|91773420|ref|YP_566112.1| - 0.067 13.1 0.8 2.2 8.1 0.1 2.2 2 0 0 2 2 2 0 NTPase NACHT PF05729.12 gi|91773420|ref|YP_566112.1| - 0.068 13.1 0.0 0.096 12.6 0.0 1.6 1 1 0 1 1 1 0 NACHT domain MMR_HSR1 PF01926.23 gi|91773420|ref|YP_566112.1| - 0.13 12.4 0.0 0.51 10.4 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|91773420|ref|YP_566112.1| - 0.14 12.3 0.1 0.32 11.1 0.1 2.0 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 gi|91773421|ref|YP_566113.1| - 4.2e-12 46.0 0.0 1.1e-11 44.7 0.0 1.7 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|91773421|ref|YP_566113.1| - 7.7e-05 21.8 0.2 0.027 13.5 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_19 PF13245.6 gi|91773421|ref|YP_566113.1| - 0.00011 22.5 0.1 0.00047 20.5 0.1 1.8 2 0 0 2 2 2 1 AAA domain CbiA PF01656.23 gi|91773421|ref|YP_566113.1| - 0.0021 18.1 0.1 0.0031 17.6 0.1 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zeta_toxin PF06414.12 gi|91773421|ref|YP_566113.1| - 0.0024 17.2 0.0 0.0085 15.4 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin DUF2075 PF09848.9 gi|91773421|ref|YP_566113.1| - 0.006 15.9 0.1 0.0081 15.4 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 gi|91773421|ref|YP_566113.1| - 0.0064 16.3 0.0 0.0094 15.7 0.0 1.2 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.6 gi|91773421|ref|YP_566113.1| - 0.015 15.7 0.0 0.028 14.8 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain MobB PF03205.14 gi|91773421|ref|YP_566113.1| - 0.018 14.9 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 gi|91773421|ref|YP_566113.1| - 0.037 14.6 0.1 0.073 13.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain DnaB_C PF03796.15 gi|91773421|ref|YP_566113.1| - 0.037 13.3 0.0 0.06 12.7 0.0 1.3 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain KTI12 PF08433.10 gi|91773421|ref|YP_566113.1| - 0.046 13.2 0.0 0.073 12.5 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 UvrD-helicase PF00580.21 gi|91773421|ref|YP_566113.1| - 0.05 13.1 0.2 0.077 12.5 0.2 1.3 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain ALS_ss_C PF10369.9 gi|91773421|ref|YP_566113.1| - 0.056 13.6 0.1 0.1 12.8 0.1 1.4 1 0 0 1 1 1 0 Small subunit of acetolactate synthase NACHT PF05729.12 gi|91773421|ref|YP_566113.1| - 0.069 13.1 0.1 0.22 11.4 0.0 1.8 2 0 0 2 2 2 0 NACHT domain PRK PF00485.18 gi|91773421|ref|YP_566113.1| - 0.093 12.5 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_11 PF13086.6 gi|91773421|ref|YP_566113.1| - 0.12 12.1 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain TK PF00265.18 gi|91773421|ref|YP_566113.1| - 0.12 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Thymidine kinase AAA_30 PF13604.6 gi|91773421|ref|YP_566113.1| - 0.15 11.8 0.1 0.27 10.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|91773421|ref|YP_566113.1| - 0.16 11.7 0.1 1.3 8.8 0.0 2.0 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein TrwB_AAD_bind PF10412.9 gi|91773421|ref|YP_566113.1| - 0.16 10.8 0.0 0.24 10.3 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 gi|91773421|ref|YP_566113.1| - 0.17 12.2 0.0 0.31 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain FeS PF04060.13 gi|91773422|ref|YP_566114.1| - 1.5e-09 37.3 3.8 2e-09 36.9 0.9 2.4 2 0 0 2 2 2 1 Putative Fe-S cluster zf-RING_4 PF14570.6 gi|91773422|ref|YP_566114.1| - 0.17 11.7 2.4 0.16 11.8 0.8 1.8 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain TPP_enzyme_N PF02776.18 gi|91773423|ref|YP_566115.1| - 1.5e-13 50.7 0.0 1.7e-13 50.6 0.0 1.0 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|91773424|ref|YP_566116.1| - 7.5e-20 71.3 0.5 1.4e-19 70.3 0.5 1.5 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HcyBio PF01837.16 gi|91773425|ref|YP_566117.1| - 1.2e-106 356.5 0.0 1.4e-106 356.3 0.0 1.0 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation Fer4_7 PF12838.7 gi|91773425|ref|YP_566117.1| - 0.00013 22.5 8.2 0.00022 21.8 7.0 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91773425|ref|YP_566117.1| - 0.0014 19.1 3.5 2.7 8.5 0.0 2.5 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91773425|ref|YP_566117.1| - 0.0058 16.8 7.2 0.013 15.6 7.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91773425|ref|YP_566117.1| - 0.016 15.3 12.4 0.24 11.6 3.0 2.7 2 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91773425|ref|YP_566117.1| - 0.025 14.4 11.6 0.63 9.9 3.6 3.1 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91773425|ref|YP_566117.1| - 0.027 14.6 10.4 0.24 11.6 11.0 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773425|ref|YP_566117.1| - 0.15 12.2 13.1 0.78 10.0 1.8 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|91773425|ref|YP_566117.1| - 0.46 11.3 7.5 0.5 11.1 0.1 3.0 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|91773425|ref|YP_566117.1| - 3.2 8.4 12.9 14 6.3 3.7 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773425|ref|YP_566117.1| - 4 8.1 13.0 2.8 8.6 0.5 3.2 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|91773425|ref|YP_566117.1| - 4.4 8.1 11.2 3.4 8.4 1.7 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91773425|ref|YP_566117.1| - 4.8 8.2 8.6 29 5.7 0.7 2.5 1 1 3 4 4 4 0 4Fe-4S double cluster binding domain Na_H_Exchanger PF00999.21 gi|91773426|ref|YP_566118.1| - 2e-59 201.3 47.9 2.8e-59 200.8 47.9 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|91773426|ref|YP_566118.1| - 2.3e-21 76.2 0.0 4.3e-21 75.3 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|91773426|ref|YP_566118.1| - 8.9e-13 47.9 0.1 2.1e-12 46.7 0.1 1.7 1 0 0 1 1 1 1 TrkA-C domain tRNA-synt_1b PF00579.25 gi|91773428|ref|YP_566120.1| - 1.6e-56 191.8 0.0 1.9e-56 191.5 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.18 gi|91773428|ref|YP_566120.1| - 0.011 14.7 0.0 0.34 9.8 0.0 2.1 2 0 0 2 2 2 0 tRNA synthetases class I (K) Thg1 PF04446.12 gi|91773429|ref|YP_566121.1| - 2.3e-22 79.3 0.0 3.1e-22 78.9 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Thg1C PF14413.6 gi|91773429|ref|YP_566121.1| - 4.9e-09 36.4 0.2 1e-08 35.4 0.1 1.6 2 0 0 2 2 2 1 Thg1 C terminal domain PRC PF05239.16 gi|91773430|ref|YP_566122.1| - 2.4e-14 53.1 2.0 3.1e-14 52.8 2.0 1.1 1 0 0 1 1 1 1 PRC-barrel domain RNase_H_2 PF13482.6 gi|91773431|ref|YP_566123.1| - 4.5e-37 127.6 0.7 8.3e-37 126.7 0.2 1.7 2 0 0 2 2 2 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|91773431|ref|YP_566123.1| - 0.013 15.2 0.0 0.26 11.0 0.0 2.3 1 1 1 2 2 2 0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB UvrC_HhH_N PF08459.11 gi|91773432|ref|YP_566124.1| - 8.2e-56 188.2 0.3 4.6e-55 185.8 0.0 2.3 1 1 1 2 2 2 1 UvrC Helix-hairpin-helix N-terminal HHH_5 PF14520.6 gi|91773432|ref|YP_566124.1| - 8.1e-12 45.6 0.0 2.3e-11 44.1 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain GIY-YIG PF01541.24 gi|91773432|ref|YP_566124.1| - 1.8e-11 44.1 0.2 2.3e-10 40.6 0.1 2.7 2 0 0 2 2 2 1 GIY-YIG catalytic domain HHH_2 PF12826.7 gi|91773432|ref|YP_566124.1| - 3e-11 43.2 0.8 8.5e-11 41.8 0.2 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif UVR PF02151.19 gi|91773432|ref|YP_566124.1| - 4.4e-08 32.6 0.4 1.1e-07 31.3 0.4 1.7 1 0 0 1 1 1 1 UvrB/uvrC motif HHH PF00633.23 gi|91773432|ref|YP_566124.1| - 5.6e-08 32.3 0.0 0.00027 20.6 0.1 3.1 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|91773432|ref|YP_566124.1| - 5.5e-05 23.3 0.1 0.0021 18.2 0.0 2.7 1 1 0 2 2 2 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 gi|91773432|ref|YP_566124.1| - 0.28 11.8 2.8 0.75 10.4 0.0 3.1 3 0 0 3 3 3 0 5'-3' exonuclease, C-terminal SAM fold DUF2335 PF10097.9 gi|91773432|ref|YP_566124.1| - 0.42 10.6 2.5 6 6.9 0.0 3.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2335) CxxCxxCC PF03692.15 gi|91773433|ref|YP_566125.1| - 1.4e-11 45.0 2.7 1.4e-11 45.0 2.7 2.0 2 0 0 2 2 2 1 Putative zinc- or iron-chelating domain TATR PF03430.13 gi|91773433|ref|YP_566125.1| - 0.058 11.8 2.6 1.6 7.0 0.1 2.1 2 0 0 2 2 2 0 Trans-activating transcriptional regulator Radical_SAM PF04055.21 gi|91773434|ref|YP_566126.1| - 2.6e-19 70.2 0.0 4.2e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 gi|91773434|ref|YP_566126.1| - 1.5e-05 25.0 0.0 3e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain Peptidase_M50 PF02163.22 gi|91773435|ref|YP_566127.1| - 9.8e-15 54.5 13.5 1.1e-08 34.6 0.5 2.5 1 1 1 2 2 2 2 Peptidase family M50 DUF126 PF01989.16 gi|91773436|ref|YP_566128.1| - 3.1e-35 119.8 0.3 4.3e-35 119.4 0.3 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain DUF521 PF04412.13 gi|91773437|ref|YP_566129.1| - 5.1e-161 535.9 0.2 5.8e-161 535.7 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) UbiD PF01977.16 gi|91773438|ref|YP_566130.1| - 4.9e-114 381.3 3.2 5.6e-114 381.2 3.2 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Glyco_hydro_64 PF16483.5 gi|91773439|ref|YP_566131.1| - 0.044 13.1 0.1 0.058 12.7 0.1 1.1 1 0 0 1 1 1 0 Beta-1,3-glucanase RPN5_C PF18098.1 gi|91773439|ref|YP_566131.1| - 0.1 12.7 0.5 2.4 8.3 0.0 2.7 3 0 0 3 3 3 0 26S proteasome regulatory subunit RPN5 C-terminal domain CTP_transf_like PF01467.26 gi|91773440|ref|YP_566132.1| - 1.8e-10 41.2 0.0 3.4e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Cytidylyltransferase-like CinA PF02464.17 gi|91773440|ref|YP_566132.1| - 0.1 12.2 0.2 0.27 10.8 0.2 1.7 1 0 0 1 1 1 0 Competence-damaged protein Cupin_2 PF07883.11 gi|91773441|ref|YP_566133.1| - 9.5e-10 38.1 0.2 1.4e-09 37.6 0.2 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 gi|91773441|ref|YP_566133.1| - 4.9e-06 26.1 0.0 7.4e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 gi|91773441|ref|YP_566133.1| - 0.035 14.0 0.1 0.047 13.6 0.1 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain GPI PF06560.11 gi|91773441|ref|YP_566133.1| - 0.079 12.2 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) DUF577 PF04510.12 gi|91773441|ref|YP_566133.1| - 0.1 12.5 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF577) Fe_dep_repress PF01325.19 gi|91773442|ref|YP_566134.1| - 1.5e-18 66.7 0.0 3.3e-18 65.6 0.0 1.6 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 gi|91773442|ref|YP_566134.1| - 2.4e-06 27.4 0.0 4.5e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|91773442|ref|YP_566134.1| - 3.7e-05 23.5 0.0 5.6e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|91773442|ref|YP_566134.1| - 5.3e-05 22.7 0.0 0.0001 21.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|91773442|ref|YP_566134.1| - 0.00077 19.4 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|91773442|ref|YP_566134.1| - 0.0019 18.5 0.0 0.0035 17.6 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator LexA_DNA_bind PF01726.16 gi|91773442|ref|YP_566134.1| - 0.0034 17.1 0.0 0.0058 16.4 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain FeoC PF09012.10 gi|91773442|ref|YP_566134.1| - 0.0056 16.7 0.1 0.01 15.9 0.1 1.5 1 1 0 1 1 1 1 FeoC like transcriptional regulator Crp PF00325.20 gi|91773442|ref|YP_566134.1| - 0.017 14.8 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family HTH_micro PF17007.5 gi|91773442|ref|YP_566134.1| - 0.021 13.7 0.0 0.024 13.5 0.0 1.1 1 0 0 1 1 1 0 HTH-like FeoA PF04023.14 gi|91773442|ref|YP_566134.1| - 0.043 14.1 0.0 0.068 13.4 0.0 1.3 1 0 0 1 1 1 0 FeoA domain TrmB PF01978.19 gi|91773442|ref|YP_566134.1| - 0.064 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_Tnp_ISL3 PF13542.6 gi|91773442|ref|YP_566134.1| - 0.067 12.6 0.0 0.13 11.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_IclR PF09339.10 gi|91773442|ref|YP_566134.1| - 0.089 12.6 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_38 PF13936.6 gi|91773442|ref|YP_566134.1| - 0.091 12.5 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|91773442|ref|YP_566134.1| - 0.095 12.5 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Phage_terminase PF10668.9 gi|91773442|ref|YP_566134.1| - 0.099 12.7 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Phage terminase small subunit HTH_5 PF01022.20 gi|91773442|ref|YP_566134.1| - 0.12 12.3 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family B-block_TFIIIC PF04182.12 gi|91773442|ref|YP_566134.1| - 0.13 12.4 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_6 PF01418.17 gi|91773442|ref|YP_566134.1| - 0.16 12.0 0.0 0.42 10.6 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family GXGXG PF01493.19 gi|91773443|ref|YP_566135.1| - 1.4e-10 41.1 14.0 1.8e-08 34.2 4.4 2.6 3 1 0 3 3 3 2 GXGXG motif HCV_NS5a_1a PF08300.13 gi|91773443|ref|YP_566135.1| - 0.13 12.4 0.5 0.45 10.7 0.2 2.1 2 1 0 2 2 2 0 Hepatitis C virus non-structural 5a zinc finger domain FapA PF03961.13 gi|91773443|ref|YP_566135.1| - 0.78 8.3 12.4 0.86 8.1 5.6 2.3 1 1 1 2 2 2 0 Flagellar Assembly Protein A Fer4_21 PF14697.6 gi|91773444|ref|YP_566136.1| - 3.1e-09 36.8 8.6 3.1e-09 36.8 8.6 2.1 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773444|ref|YP_566136.1| - 1.5e-08 34.3 16.1 4.9e-06 26.4 3.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4 PF00037.27 gi|91773444|ref|YP_566136.1| - 1.6e-08 34.0 12.0 1.7e-06 27.6 4.0 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91773444|ref|YP_566136.1| - 5.4e-08 33.3 9.7 0.00071 20.1 1.0 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91773444|ref|YP_566136.1| - 1.4e-07 31.5 17.7 9.5e-06 25.7 6.6 2.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91773444|ref|YP_566136.1| - 2e-05 25.5 12.2 0.021 15.7 3.1 2.7 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|91773444|ref|YP_566136.1| - 4.2e-05 23.6 8.4 4.2e-05 23.6 8.4 2.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91773444|ref|YP_566136.1| - 9.2e-05 23.1 15.5 0.002 18.8 9.6 2.7 2 1 0 2 2 1 1 4Fe-4S single cluster domain Fer4_2 PF12797.7 gi|91773444|ref|YP_566136.1| - 0.00011 22.1 2.3 0.00011 22.1 2.3 3.9 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91773444|ref|YP_566136.1| - 0.0052 17.3 10.2 0.099 13.2 0.8 2.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91773444|ref|YP_566136.1| - 0.046 14.2 4.3 0.046 14.2 4.3 3.9 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|91773444|ref|YP_566136.1| - 0.083 13.7 1.9 0.083 13.7 1.9 3.1 4 0 0 4 4 4 0 4Fe-4S dicluster domain CGGC PF08821.11 gi|91773445|ref|YP_566137.1| - 1.7e-20 73.2 0.4 1.8e-20 73.1 0.4 1.0 1 0 0 1 1 1 1 CGGC domain DUF166 PF02593.14 gi|91773446|ref|YP_566138.1| - 9.6e-81 270.5 0.0 1.1e-80 270.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function NIR_SIR PF01077.22 gi|91773447|ref|YP_566139.1| - 1.3e-30 106.0 0.0 1.9e-30 105.4 0.0 1.3 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|91773447|ref|YP_566139.1| - 1.1e-14 54.0 0.0 2.1e-14 53.1 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain DUF2059 PF09832.9 gi|91773447|ref|YP_566139.1| - 0.11 12.5 0.0 0.45 10.6 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2059) HxlR PF01638.17 gi|91773448|ref|YP_566140.1| - 9.8e-24 83.0 0.2 1.2e-23 82.8 0.2 1.0 1 0 0 1 1 1 1 HxlR-like helix-turn-helix DUF2513 PF10711.9 gi|91773448|ref|YP_566140.1| - 0.00023 21.4 0.0 0.00028 21.1 0.0 1.1 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_24 PF13412.6 gi|91773448|ref|YP_566140.1| - 0.00026 20.5 0.0 0.00051 19.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|91773448|ref|YP_566140.1| - 0.003 17.4 0.1 0.0042 17.0 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|91773448|ref|YP_566140.1| - 0.0052 16.8 0.0 0.0074 16.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|91773448|ref|YP_566140.1| - 0.0065 16.3 0.0 0.009 15.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|91773448|ref|YP_566140.1| - 0.013 15.6 0.1 0.018 15.2 0.1 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|91773448|ref|YP_566140.1| - 0.014 15.4 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PadR PF03551.14 gi|91773448|ref|YP_566140.1| - 0.039 13.9 0.0 0.06 13.3 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Replic_Relax PF13814.6 gi|91773448|ref|YP_566140.1| - 0.065 13.3 0.0 0.071 13.2 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation DUF4423 PF14394.6 gi|91773448|ref|YP_566140.1| - 0.13 11.9 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Pro_isomerase PF00160.21 gi|91773450|ref|YP_566142.1| - 1.4e-48 165.1 0.5 1.7e-48 164.9 0.5 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF4361 PF14274.6 gi|91773452|ref|YP_566144.1| - 0.054 13.8 1.9 0.31 11.3 0.2 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4361) DUF5453 PF17534.2 gi|91773453|ref|YP_566145.1| - 0.011 15.7 0.6 0.039 13.9 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5453) PilX_N PF14341.6 gi|91773453|ref|YP_566145.1| - 0.094 12.7 0.7 0.094 12.7 0.7 1.9 2 0 0 2 2 2 0 PilX N-terminal DUF948 PF06103.11 gi|91773453|ref|YP_566145.1| - 0.23 11.7 3.1 0.6 10.4 3.1 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Pilin_N PF07790.11 gi|91773455|ref|YP_566147.1| - 0.31 12.0 6.1 1.6 9.7 6.0 2.5 1 1 0 1 1 1 0 Archaeal Type IV pilin, N-terminal VWA PF00092.28 gi|91773456|ref|YP_566148.1| - 1.4e-08 35.2 1.1 1e-07 32.4 0.1 2.3 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|91773456|ref|YP_566148.1| - 6.5e-05 22.9 0.0 0.00013 21.9 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|91773456|ref|YP_566148.1| - 0.0095 15.3 0.2 0.017 14.5 0.2 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein P_proprotein PF01483.20 gi|91773456|ref|YP_566148.1| - 0.025 14.6 0.0 5.1 7.2 0.0 3.1 2 0 0 2 2 2 0 Proprotein convertase P-domain VWA_2 PF13519.6 gi|91773456|ref|YP_566148.1| - 0.029 15.0 0.2 1.8 9.3 0.0 2.6 2 0 0 2 2 2 0 von Willebrand factor type A domain VWA PF00092.28 gi|91773457|ref|YP_566149.1| - 4.4e-27 95.5 0.7 1.4e-26 93.9 0.2 2.1 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|91773457|ref|YP_566149.1| - 3.1e-16 59.9 1.0 2.8e-14 53.7 0.2 2.6 1 1 1 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|91773457|ref|YP_566149.1| - 2.9e-12 46.8 0.0 4.4e-12 46.2 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain Invasin_D3 PF09134.10 gi|91773457|ref|YP_566149.1| - 2.7e-11 43.6 19.0 0.0012 19.1 0.2 5.8 5 0 0 5 5 5 4 Invasin, domain 3 Big_1 PF02369.16 gi|91773457|ref|YP_566149.1| - 4.5e-09 36.2 31.8 1.5e-05 24.9 4.4 6.8 7 1 0 7 7 7 3 Bacterial Ig-like domain (group 1) VWA_CoxE PF05762.14 gi|91773457|ref|YP_566149.1| - 0.048 13.1 8.9 0.17 11.2 4.4 3.4 2 1 0 2 2 2 0 VWA domain containing CoxE-like protein CobT_C PF11775.8 gi|91773457|ref|YP_566149.1| - 0.059 13.0 0.5 0.3 10.7 0.1 2.2 2 1 1 3 3 3 0 Cobalamin biosynthesis protein CobT VWA domain Tox-ODYAM1 PF15642.6 gi|91773458|ref|YP_566150.1| - 0.018 14.0 0.1 0.022 13.8 0.1 1.1 1 0 0 1 1 1 0 Toxin in Odyssella and Amoebophilus ThiC_Rad_SAM PF01964.18 gi|91773459|ref|YP_566151.1| - 5.1e-166 552.6 2.4 5.8e-166 552.4 2.4 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family Glycos_transf_2 PF00535.26 gi|91773460|ref|YP_566152.1| - 3.8e-16 59.4 0.0 5.2e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|91773460|ref|YP_566152.1| - 3e-05 24.0 0.0 4.5e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|91773460|ref|YP_566152.1| - 0.0012 19.3 0.0 0.0023 18.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Tweety PF04906.13 gi|91773460|ref|YP_566152.1| - 0.015 14.0 0.0 0.022 13.4 0.0 1.1 1 0 0 1 1 1 0 Tweety YflT PF11181.8 gi|91773460|ref|YP_566152.1| - 0.099 13.2 0.1 0.23 12.0 0.1 1.6 1 0 0 1 1 1 0 Heat induced stress protein YflT DAGK_cat PF00781.24 gi|91773460|ref|YP_566152.1| - 0.12 11.9 0.1 0.25 11.0 0.1 1.6 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain TBP PF00352.21 gi|91773461|ref|YP_566153.1| - 4.3e-56 186.8 0.9 4.7e-27 93.8 0.0 3.0 3 0 0 3 3 3 3 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|91773461|ref|YP_566153.1| - 2.4e-07 30.8 0.0 0.013 15.6 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NdhS PF11623.8 gi|91773461|ref|YP_566153.1| - 0.00093 18.8 0.0 1.1 9.0 0.0 2.5 2 0 0 2 2 2 2 NAD(P)H dehydrogenase subunit S SMC_ScpB PF04079.16 gi|91773462|ref|YP_566154.1| - 3.1e-38 130.9 0.1 1.3e-37 128.9 0.0 2.0 2 1 1 3 3 3 1 Segregation and condensation complex subunit ScpB HTH_20 PF12840.7 gi|91773462|ref|YP_566154.1| - 0.001 19.1 0.0 0.0029 17.7 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|91773462|ref|YP_566154.1| - 0.0096 15.8 0.1 0.25 11.3 0.0 2.7 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB B-block_TFIIIC PF04182.12 gi|91773462|ref|YP_566154.1| - 0.057 13.6 0.0 18 5.6 0.0 2.5 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC YozD PF14162.6 gi|91773462|ref|YP_566154.1| - 0.55 10.6 2.7 1.8 8.9 0.2 2.8 2 1 1 3 3 3 0 YozD-like protein SMC_ScpA PF02616.14 gi|91773463|ref|YP_566155.1| - 6.6e-20 72.0 3.3 2.1e-18 67.1 3.3 2.2 1 1 0 1 1 1 1 Segregation and condensation protein ScpA SMC_N PF02463.19 gi|91773464|ref|YP_566156.1| - 3.1e-69 232.8 14.3 8.1e-69 231.4 14.3 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|91773464|ref|YP_566156.1| - 1.5e-34 118.8 0.2 1.3e-33 115.8 0.0 2.7 3 0 0 3 3 3 1 SMC proteins Flexible Hinge Domain AAA_23 PF13476.6 gi|91773464|ref|YP_566156.1| - 1e-13 52.2 20.2 1e-13 52.2 20.2 5.9 2 2 2 4 4 4 1 AAA domain AAA_15 PF13175.6 gi|91773464|ref|YP_566156.1| - 3e-08 33.8 30.7 3e-08 33.8 30.7 4.3 2 2 1 3 3 3 1 AAA ATPase domain AAA_21 PF13304.6 gi|91773464|ref|YP_566156.1| - 3.8e-08 33.5 0.3 0.0001 22.2 0.1 4.2 4 1 1 5 5 5 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|91773464|ref|YP_566156.1| - 2.9e-07 30.1 0.0 6.4e-07 29.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain EzrA PF06160.12 gi|91773464|ref|YP_566156.1| - 0.6 8.2 83.6 0.26 9.4 4.9 5.4 2 2 3 5 5 5 0 Septation ring formation regulator, EzrA APG6_N PF17675.1 gi|91773464|ref|YP_566156.1| - 1.6 9.3 108.4 0.75 10.3 1.4 8.5 2 2 4 7 7 7 0 Apg6 coiled-coil region COG2 PF06148.11 gi|91773465|ref|YP_566157.1| - 0.064 13.3 1.9 0.13 12.4 1.9 1.4 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 SKA2 PF16740.5 gi|91773465|ref|YP_566157.1| - 0.13 12.1 1.9 0.26 11.1 1.9 1.5 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 AAA_23 PF13476.6 gi|91773466|ref|YP_566158.1| - 8.5e-22 78.6 7.4 8.5e-22 78.6 7.4 4.7 1 1 0 3 3 2 1 AAA domain SMC_N PF02463.19 gi|91773466|ref|YP_566158.1| - 1.6e-21 76.8 0.0 3e-21 75.9 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|91773466|ref|YP_566158.1| - 4.6e-10 39.7 9.7 4.6e-10 39.7 9.7 3.3 1 1 1 2 2 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|91773466|ref|YP_566158.1| - 2.4e-08 34.2 7.3 0.00016 21.6 0.0 3.8 3 2 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|91773466|ref|YP_566158.1| - 2.4e-05 24.0 0.0 6.6e-05 22.6 0.0 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 gi|91773466|ref|YP_566158.1| - 0.00017 21.7 0.0 0.048 13.9 0.0 2.6 2 0 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_27 PF13514.6 gi|91773466|ref|YP_566158.1| - 0.0031 17.1 0.0 0.011 15.3 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|91773466|ref|YP_566158.1| - 0.007 16.8 0.0 0.024 15.0 0.0 2.0 1 0 0 1 1 1 1 AAA ATPase domain MukB PF04310.12 gi|91773466|ref|YP_566158.1| - 0.05 13.4 2.0 0.5 10.1 0.0 3.4 3 0 0 3 3 3 0 MukB N-terminal USP8_interact PF08941.10 gi|91773466|ref|YP_566158.1| - 0.055 13.3 1.1 8.5 6.1 0.0 3.3 2 1 0 2 2 2 0 USP8 interacting Rad50_zn_hook PF04423.14 gi|91773466|ref|YP_566158.1| - 0.87 9.5 8.2 1.3 8.9 1.8 4.7 3 1 0 3 3 3 0 Rad50 zinc hook motif Pox_A_type_inc PF04508.12 gi|91773466|ref|YP_566158.1| - 2.3 8.2 5.5 4.4 7.3 1.7 3.7 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat Fzo_mitofusin PF04799.13 gi|91773466|ref|YP_566158.1| - 7.7 6.0 14.4 0.45 10.0 0.1 4.2 4 1 0 4 4 4 0 fzo-like conserved region DUF724 PF05266.14 gi|91773466|ref|YP_566158.1| - 8.5 6.2 37.2 0.65 9.8 9.2 4.7 2 1 3 5 5 5 0 Protein of unknown function (DUF724) Metallophos PF00149.28 gi|91773467|ref|YP_566159.1| - 7.6e-13 49.4 0.6 7.6e-13 49.4 0.6 1.7 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|91773467|ref|YP_566159.1| - 5.8e-10 39.6 0.7 1.6e-09 38.2 0.3 1.9 2 1 0 2 2 2 1 Calcineurin-like phosphoesterase superfamily domain RNA_pol_Rpb2_4 PF04566.13 gi|91773467|ref|YP_566159.1| - 0.12 12.7 0.3 2.5 8.4 0.0 2.9 3 0 0 3 3 3 0 RNA polymerase Rpb2, domain 4 HEPN_AbiA_CTD PF18732.1 gi|91773467|ref|YP_566159.1| - 0.23 11.4 1.3 16 5.5 0.5 2.3 2 0 0 2 2 2 0 HEPN like, Abia C-terminal domain GPI PF06560.11 gi|91773468|ref|YP_566160.1| - 3.4e-42 143.8 0.3 4.5e-42 143.4 0.3 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.11 gi|91773468|ref|YP_566160.1| - 6.6e-05 22.6 0.3 0.00038 20.1 0.3 2.2 2 1 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 gi|91773468|ref|YP_566160.1| - 0.058 13.0 0.0 0.094 12.3 0.0 1.3 1 0 0 1 1 1 0 Cupin NRD1_2 PF01995.16 gi|91773469|ref|YP_566161.1| - 5.9e-95 317.1 1.2 6.6e-95 316.9 1.2 1.0 1 0 0 1 1 1 1 NrpR regulatory domains NRD1 and 2 DHHA1 PF02272.19 gi|91773470|ref|YP_566162.1| - 1.2e-15 58.2 2.0 1.3e-15 58.0 0.7 1.8 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|91773470|ref|YP_566162.1| - 0.0072 16.6 0.2 0.014 15.6 0.2 1.5 1 0 0 1 1 1 1 DHH family DUF1847 PF08901.11 gi|91773470|ref|YP_566162.1| - 0.15 11.7 0.1 3.4 7.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1847) CDC45 PF02724.14 gi|91773470|ref|YP_566162.1| - 0.25 9.6 0.0 1.4 7.1 0.0 1.9 2 0 0 2 2 2 0 CDC45-like protein Hjc PF01870.18 gi|91773471|ref|YP_566163.1| - 0.016 15.2 0.0 0.03 14.3 0.0 1.6 1 1 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) CreD PF06123.12 gi|91773472|ref|YP_566164.1| - 0.043 12.6 1.7 0.047 12.5 1.7 1.1 1 0 0 1 1 1 0 Inner membrane protein CreD TssN PF17555.2 gi|91773472|ref|YP_566164.1| - 0.058 12.8 1.2 0.064 12.6 1.2 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF1699 PF08004.11 gi|91773473|ref|YP_566165.1| - 2e-64 215.1 1.6 2.3e-64 214.9 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Lactamase_B_3 PF13483.6 gi|91773474|ref|YP_566166.1| - 1.1e-34 119.7 0.0 1.3e-34 119.4 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|91773474|ref|YP_566166.1| - 1.5e-15 57.3 0.0 2.1e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|91773474|ref|YP_566166.1| - 0.0036 17.3 0.3 0.06 13.3 0.1 2.1 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Rpr2 PF04032.16 gi|91773475|ref|YP_566167.1| - 5.4e-15 55.4 0.1 9.2e-15 54.7 0.1 1.4 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain Ribosomal_S27e PF01667.17 gi|91773475|ref|YP_566167.1| - 0.12 12.1 0.4 4.8 7.0 0.1 2.2 1 1 1 2 2 2 0 Ribosomal protein S27 B12D PF06522.11 gi|91773476|ref|YP_566168.1| - 2.6 7.9 3.4 2.5 8.0 1.6 1.8 2 0 0 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit HTH_45 PF14947.6 gi|91773477|ref|YP_566169.1| - 0.00015 21.6 0.1 0.00017 21.5 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.19 gi|91773477|ref|YP_566169.1| - 0.0077 16.1 0.1 0.011 15.6 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB AvrM_N PF18247.1 gi|91773477|ref|YP_566169.1| - 0.022 14.7 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 Flax-rust effector AvrM N-terminal domain TBPIP PF07106.13 gi|91773477|ref|YP_566169.1| - 0.062 13.2 0.2 0.1 12.6 0.2 1.4 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain HTH_27 PF13463.6 gi|91773477|ref|YP_566169.1| - 0.078 13.5 0.0 0.098 13.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain ATPase PF06745.13 gi|91773478|ref|YP_566170.1| - 5.8e-71 238.5 0.5 6.1e-43 146.8 0.1 2.9 2 1 0 2 2 2 2 KaiC DnaB_C PF03796.15 gi|91773478|ref|YP_566170.1| - 2.6e-12 46.7 0.0 2.4e-06 27.1 0.0 2.3 2 0 0 2 2 2 2 DnaB-like helicase C terminal domain AAA_25 PF13481.6 gi|91773478|ref|YP_566170.1| - 3.6e-09 36.5 0.0 0.00038 20.1 0.1 3.1 2 1 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|91773478|ref|YP_566170.1| - 9e-07 29.4 0.0 0.0018 18.7 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_24 PF13479.6 gi|91773478|ref|YP_566170.1| - 2.8e-06 27.2 0.0 0.016 15.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain GvpD PF07088.11 gi|91773478|ref|YP_566170.1| - 8.1e-06 24.7 0.9 0.03 12.9 0.0 3.2 4 0 0 4 4 4 2 GvpD gas vesicle protein NACHT PF05729.12 gi|91773478|ref|YP_566170.1| - 1.4e-05 25.1 0.0 0.018 15.0 0.0 2.7 2 1 0 2 2 2 1 NACHT domain IstB_IS21 PF01695.17 gi|91773478|ref|YP_566170.1| - 1.4e-05 24.9 0.2 0.0089 15.8 0.0 2.5 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 gi|91773478|ref|YP_566170.1| - 6.8e-05 23.2 0.0 0.043 14.1 0.0 2.4 2 0 0 2 2 2 1 AAA domain DUF2075 PF09848.9 gi|91773478|ref|YP_566170.1| - 0.0001 21.7 0.0 0.34 10.1 0.0 2.1 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) MEDS PF14417.6 gi|91773478|ref|YP_566170.1| - 0.00025 20.9 0.0 0.0015 18.4 0.0 2.2 2 0 0 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_7 PF12775.7 gi|91773478|ref|YP_566170.1| - 0.00029 20.4 0.6 0.055 13.0 0.1 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region Rad51 PF08423.11 gi|91773478|ref|YP_566170.1| - 0.00029 20.2 0.0 0.045 13.0 0.0 2.6 2 1 0 2 2 2 1 Rad51 Sigma54_activat PF00158.26 gi|91773478|ref|YP_566170.1| - 0.0003 20.5 0.1 0.17 11.5 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain TIP49 PF06068.13 gi|91773478|ref|YP_566170.1| - 0.00048 19.4 0.7 0.77 8.9 0.1 3.0 2 1 1 3 3 3 1 TIP49 P-loop domain AAA PF00004.29 gi|91773478|ref|YP_566170.1| - 0.00052 20.5 0.0 0.13 12.7 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|91773478|ref|YP_566170.1| - 0.00057 20.2 0.0 0.13 12.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 gi|91773478|ref|YP_566170.1| - 0.00062 18.9 0.1 0.05 12.7 0.1 2.3 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_14 PF13173.6 gi|91773478|ref|YP_566170.1| - 0.0007 19.6 0.0 0.006 16.6 0.0 2.4 2 1 0 2 2 2 1 AAA domain CbiA PF01656.23 gi|91773478|ref|YP_566170.1| - 0.0007 19.6 0.4 0.0018 18.4 0.4 2.1 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zeta_toxin PF06414.12 gi|91773478|ref|YP_566170.1| - 0.00077 18.8 0.6 0.44 9.8 0.1 2.4 2 0 0 2 2 2 1 Zeta toxin TrwB_AAD_bind PF10412.9 gi|91773478|ref|YP_566170.1| - 0.0011 17.9 0.0 0.0041 16.1 0.0 1.8 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain DEAD PF00270.29 gi|91773478|ref|YP_566170.1| - 0.0011 18.7 0.0 1.6 8.5 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase SRP54 PF00448.22 gi|91773478|ref|YP_566170.1| - 0.0016 18.1 0.0 0.0057 16.3 0.0 1.9 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 gi|91773478|ref|YP_566170.1| - 0.0017 18.3 0.3 0.44 10.4 0.2 3.3 3 0 0 3 3 3 1 NTPase AAA_18 PF13238.6 gi|91773478|ref|YP_566170.1| - 0.0024 18.4 0.0 0.058 14.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain ATP-synt_ab PF00006.25 gi|91773478|ref|YP_566170.1| - 0.0025 17.5 0.0 1.1 8.9 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain ABC_tran PF00005.27 gi|91773478|ref|YP_566170.1| - 0.0035 17.9 0.2 2 9.0 0.0 2.7 3 0 0 3 3 2 1 ABC transporter ResIII PF04851.15 gi|91773478|ref|YP_566170.1| - 0.0036 17.3 0.0 0.22 11.5 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_31 PF13614.6 gi|91773478|ref|YP_566170.1| - 0.0043 17.0 0.0 0.014 15.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|91773478|ref|YP_566170.1| - 0.0062 16.3 0.1 0.19 11.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|91773478|ref|YP_566170.1| - 0.0081 15.4 0.1 0.072 12.3 0.0 2.3 2 0 0 2 2 2 1 Anion-transporting ATPase Zot PF05707.12 gi|91773478|ref|YP_566170.1| - 0.0089 15.7 0.0 0.091 12.4 0.0 2.1 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) ATPase_2 PF01637.18 gi|91773478|ref|YP_566170.1| - 0.011 15.7 0.0 0.021 14.8 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea PAXNEB PF05625.11 gi|91773478|ref|YP_566170.1| - 0.012 14.8 0.1 0.71 8.9 0.0 2.6 2 1 1 3 3 3 0 PAXNEB protein RNA_helicase PF00910.22 gi|91773478|ref|YP_566170.1| - 0.013 15.8 0.0 3.1 8.2 0.0 2.4 2 0 0 2 2 2 0 RNA helicase AAA_33 PF13671.6 gi|91773478|ref|YP_566170.1| - 0.014 15.6 0.1 6.1 7.0 0.0 2.5 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|91773478|ref|YP_566170.1| - 0.015 14.7 1.1 1.3 8.4 0.2 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family NB-ARC PF00931.22 gi|91773478|ref|YP_566170.1| - 0.019 14.2 0.2 0.09 12.0 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain TsaE PF02367.17 gi|91773478|ref|YP_566170.1| - 0.023 14.7 0.2 9.5 6.2 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_5 PF07728.14 gi|91773478|ref|YP_566170.1| - 0.026 14.5 0.3 0.49 10.4 0.1 2.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DAP3 PF10236.9 gi|91773478|ref|YP_566170.1| - 0.03 13.5 0.1 0.44 9.7 0.1 2.2 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AAA_35 PF14516.6 gi|91773478|ref|YP_566170.1| - 0.03 13.1 0.0 0.056 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain RecA PF00154.21 gi|91773478|ref|YP_566170.1| - 0.042 13.3 0.5 0.2 11.1 0.0 2.0 2 0 0 2 2 2 0 recA bacterial DNA recombination protein Roc PF08477.13 gi|91773478|ref|YP_566170.1| - 0.045 14.0 0.0 3.4 7.9 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 gi|91773478|ref|YP_566170.1| - 0.046 13.5 1.4 0.18 11.6 0.2 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein PhoH PF02562.16 gi|91773478|ref|YP_566170.1| - 0.059 12.8 0.3 1.7 8.0 0.1 2.2 2 0 0 2 2 2 0 PhoH-like protein PIF1 PF05970.14 gi|91773478|ref|YP_566170.1| - 0.064 12.4 1.2 0.83 8.7 0.1 2.3 2 1 0 2 2 2 0 PIF1-like helicase KdpD PF02702.17 gi|91773478|ref|YP_566170.1| - 0.11 12.0 0.0 0.21 11.0 0.0 1.5 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain RsgA_GTPase PF03193.16 gi|91773478|ref|YP_566170.1| - 0.17 11.8 1.5 0.73 9.7 0.1 2.6 3 1 1 4 4 2 0 RsgA GTPase Viral_helicase1 PF01443.18 gi|91773478|ref|YP_566170.1| - 0.18 11.5 0.0 1.4 8.6 0.0 2.1 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Mg_chelatase PF01078.21 gi|91773478|ref|YP_566170.1| - 0.21 11.0 1.0 15 4.9 0.2 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 gi|91773478|ref|YP_566170.1| - 0.58 9.9 3.3 9.4 6.1 0.2 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain Exonuc_VII_S PF02609.16 gi|91773479|ref|YP_566171.1| - 3.4e-17 62.3 3.9 5.2e-17 61.6 3.9 1.3 1 0 0 1 1 1 1 Exonuclease VII small subunit COMM_domain PF07258.14 gi|91773479|ref|YP_566171.1| - 0.078 13.1 0.2 0.14 12.3 0.2 1.4 1 0 0 1 1 1 0 COMM domain KxDL PF10241.9 gi|91773479|ref|YP_566171.1| - 0.16 12.3 1.0 0.2 12.0 1.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein Exonuc_VII_L PF02601.15 gi|91773480|ref|YP_566172.1| - 2.5e-83 280.1 0.0 4.2e-77 259.7 0.1 2.1 1 1 1 2 2 2 2 Exonuclease VII, large subunit tRNA_anti_2 PF13742.6 gi|91773480|ref|YP_566172.1| - 2e-30 104.9 0.6 4e-30 103.9 0.6 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti-codon PF01336.25 gi|91773480|ref|YP_566172.1| - 7e-08 32.4 0.1 1.6e-07 31.2 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain RMI2 PF16100.5 gi|91773480|ref|YP_566172.1| - 0.0023 17.7 0.1 0.0051 16.6 0.1 1.5 1 0 0 1 1 1 1 RecQ-mediated genome instability protein 2 RecJ_OB PF17768.1 gi|91773480|ref|YP_566172.1| - 0.076 13.3 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 RecJ OB domain Myc-LZ PF02344.15 gi|91773480|ref|YP_566172.1| - 0.44 10.7 5.1 0.59 10.3 0.8 2.4 2 0 0 2 2 2 0 Myc leucine zipper domain Fer4_8 PF13183.6 gi|91773481|ref|YP_566173.1| - 1.5e-12 47.8 7.9 2.3e-12 47.2 7.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91773481|ref|YP_566173.1| - 4.6e-10 39.5 7.1 7.2e-10 38.8 7.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91773481|ref|YP_566173.1| - 9.3e-10 38.9 7.8 1.4e-09 38.3 7.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91773481|ref|YP_566173.1| - 2.8e-08 33.8 8.0 5.9e-08 32.7 8.0 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773481|ref|YP_566173.1| - 5.7e-07 30.0 11.6 3.8e-06 27.4 12.3 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91773481|ref|YP_566173.1| - 0.00011 22.2 5.8 0.00021 21.4 5.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91773481|ref|YP_566173.1| - 0.00077 19.2 13.8 0.019 14.8 3.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|91773481|ref|YP_566173.1| - 0.0015 18.5 13.5 0.0073 16.3 3.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|91773481|ref|YP_566173.1| - 0.0035 17.7 3.0 0.0035 17.7 3.0 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.6 gi|91773481|ref|YP_566173.1| - 0.0042 17.3 7.9 0.01 16.0 0.6 2.2 1 1 1 2 2 2 1 4Fe-4S dicluster domain SCIFF PF13165.6 gi|91773481|ref|YP_566173.1| - 0.065 13.2 0.3 0.065 13.2 0.3 2.3 2 0 0 2 2 2 0 Six-cysteine peptide SCIFF Fer4_3 PF12798.7 gi|91773481|ref|YP_566173.1| - 0.067 14.2 18.7 0.24 12.4 3.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91773481|ref|YP_566173.1| - 0.079 13.9 14.4 2.6 9.0 14.5 2.3 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|91773481|ref|YP_566173.1| - 0.21 12.4 3.5 1.3 9.9 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_20 PF14691.6 gi|91773481|ref|YP_566173.1| - 0.29 10.9 6.0 0.68 9.7 0.9 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_6 PF12837.7 gi|91773481|ref|YP_566173.1| - 3.3 8.0 12.8 1.4 9.1 2.4 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|91773481|ref|YP_566173.1| - 4.9 7.8 9.6 7.8 7.1 1.1 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|91773481|ref|YP_566173.1| - 6 7.8 13.4 11 7.0 4.3 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain CCG PF02754.16 gi|91773482|ref|YP_566174.1| - 5.8e-35 119.4 1.1 6.5e-19 67.9 0.2 2.3 2 0 0 2 2 2 2 Cysteine-rich domain MtrH PF02007.18 gi|91773483|ref|YP_566175.1| - 2.8e-134 446.9 1.7 3.2e-134 446.7 1.7 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit MtrG PF04210.13 gi|91773484|ref|YP_566176.1| - 1.8e-32 111.0 0.4 2e-32 110.8 0.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G MtrF PF09472.10 gi|91773485|ref|YP_566177.1| - 4.4e-30 102.9 1.6 5.2e-30 102.6 1.6 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) YqzM PF14141.6 gi|91773485|ref|YP_566177.1| - 0.48 10.5 5.2 1.2 9.3 5.2 1.8 1 1 0 1 1 1 0 YqzM-like protein MtrA PF04208.14 gi|91773486|ref|YP_566178.1| - 1.9e-84 281.6 4.2 2.6e-84 281.1 4.2 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.10 gi|91773486|ref|YP_566178.1| - 0.049 13.0 0.7 0.14 11.6 0.1 2.2 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) GP57 PF17594.2 gi|91773486|ref|YP_566178.1| - 0.094 12.5 0.0 1.3 8.8 0.0 2.6 2 0 0 2 2 2 0 Phage Tail fiber assembly helper gene product 57 MtrB PF05440.12 gi|91773487|ref|YP_566179.1| - 3.7e-39 133.0 0.1 4.2e-39 132.8 0.1 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrC PF04211.13 gi|91773488|ref|YP_566180.1| - 1.6e-112 375.0 32.4 1.8e-112 374.8 32.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C DUF1294 PF06961.13 gi|91773488|ref|YP_566180.1| - 3.6 7.9 5.2 1.6 9.0 0.3 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1294) MtrD PF04207.12 gi|91773489|ref|YP_566181.1| - 1.2e-102 342.3 26.3 1.4e-102 342.1 26.3 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D MtrE PF04206.12 gi|91773490|ref|YP_566182.1| - 3.3e-140 466.1 12.9 3.8e-140 465.9 12.9 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E SNARE_assoc PF09335.11 gi|91773490|ref|YP_566182.1| - 0.8 10.2 13.7 0.18 12.3 8.0 2.3 2 0 0 2 2 2 0 SNARE associated Golgi protein DUF5402 PF17393.2 gi|91773491|ref|YP_566183.1| - 2.7e-46 156.4 0.0 3.1e-46 156.2 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5402) Peptidase_U32 PF01136.19 gi|91773492|ref|YP_566184.1| - 9.9e-11 41.2 0.0 1.2e-09 37.7 0.0 2.0 2 0 0 2 2 2 1 Peptidase family U32 Glyco_hydro_97 PF10566.9 gi|91773492|ref|YP_566184.1| - 0.13 11.5 0.0 0.24 10.6 0.0 1.4 1 0 0 1 1 1 0 Glycoside hydrolase 97 AP_endonuc_2 PF01261.24 gi|91773493|ref|YP_566185.1| - 1.2e-26 93.5 0.1 1.4e-26 93.2 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvdE PF03851.14 gi|91773493|ref|YP_566185.1| - 0.00014 21.2 0.1 0.00019 20.8 0.1 1.1 1 0 0 1 1 1 1 UV-endonuclease UvdE HMGL-like PF00682.19 gi|91773493|ref|YP_566185.1| - 0.0024 17.5 0.3 0.0056 16.3 0.0 1.7 2 0 0 2 2 2 1 HMGL-like Usp PF00582.26 gi|91773494|ref|YP_566186.1| - 4.7e-24 85.5 0.5 5.9e-24 85.2 0.5 1.1 1 0 0 1 1 1 1 Universal stress protein family ADH_zinc_N PF00107.26 gi|91773494|ref|YP_566186.1| - 0.001 19.1 0.1 0.0011 18.9 0.1 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase PTS-HPr PF00381.19 gi|91773494|ref|YP_566186.1| - 0.025 14.8 0.1 0.25 11.6 0.0 2.0 2 0 0 2 2 2 0 PTS HPr component phosphorylation site CheD PF03975.13 gi|91773494|ref|YP_566186.1| - 0.062 13.4 0.2 0.088 12.9 0.2 1.2 1 0 0 1 1 1 0 CheD chemotactic sensory transduction DNA_photolyase PF00875.18 gi|91773494|ref|YP_566186.1| - 0.17 11.9 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 DNA photolyase Wzy_C PF04932.15 gi|91773495|ref|YP_566187.1| - 0.017 14.8 0.3 0.017 14.8 0.3 1.5 2 0 0 2 2 2 0 O-Antigen ligase zf-C2H2_9 PF16293.5 gi|91773495|ref|YP_566187.1| - 0.1 12.5 0.0 0.25 11.2 0.1 1.7 2 0 0 2 2 2 0 C2H2 type zinc-finger (1 copy) HIT PF01230.23 gi|91773496|ref|YP_566188.1| - 2e-25 89.3 0.0 2.5e-25 89.1 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|91773496|ref|YP_566188.1| - 1.7e-14 54.2 0.0 2.1e-14 54.0 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|91773496|ref|YP_566188.1| - 0.0042 16.9 0.1 0.0069 16.3 0.0 1.4 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 Fic PF02661.18 gi|91773497|ref|YP_566189.1| - 4.8e-20 72.3 0.0 1.5e-19 70.7 0.0 1.9 1 0 0 1 1 1 1 Fic/DOC family HTH_DeoR PF08220.12 gi|91773497|ref|YP_566189.1| - 9.4e-06 25.3 0.0 2.7e-05 23.8 0.0 1.8 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain DUF4172 PF13776.6 gi|91773497|ref|YP_566189.1| - 0.0014 18.9 0.0 0.0036 17.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4172) Fic_N PF13784.6 gi|91773497|ref|YP_566189.1| - 0.0016 18.5 0.9 0.0062 16.6 0.3 2.2 2 0 0 2 2 2 1 Fic/DOC family N-terminal Dioxygenase_N PF04444.14 gi|91773497|ref|YP_566189.1| - 0.025 14.4 0.5 0.3 11.0 0.2 2.9 3 1 1 4 4 4 0 Catechol dioxygenase N terminus DUF2089 PF09862.9 gi|91773497|ref|YP_566189.1| - 0.026 14.6 1.0 0.083 12.9 0.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2089) PhoU PF01895.19 gi|91773497|ref|YP_566189.1| - 0.049 14.1 2.7 4.8 7.7 0.1 3.4 3 0 0 3 3 3 0 PhoU domain VbhA PF18495.1 gi|91773497|ref|YP_566189.1| - 0.14 12.0 0.1 0.26 11.2 0.1 1.4 1 0 0 1 1 1 0 Antitoxin VbhA Vsr PF03852.15 gi|91773498|ref|YP_566190.1| - 1.2e-18 66.7 0.0 2.2e-18 65.9 0.0 1.3 1 0 0 1 1 1 1 DNA mismatch endonuclease Vsr MTES_1575 PF18741.1 gi|91773498|ref|YP_566190.1| - 0.064 13.4 0.7 0.12 12.5 0.7 1.5 1 0 0 1 1 1 0 REase_MTES_1575 DUF1232 PF06803.12 gi|91773499|ref|YP_566191.1| - 5.3e-07 29.3 0.0 1.2e-06 28.2 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) DUF1232 PF06803.12 gi|91773500|ref|YP_566192.1| - 9.3e-07 28.5 0.3 9.3e-07 28.5 0.3 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1232) Helicase_C PF00271.31 gi|91773501|ref|YP_566193.1| - 1.6e-23 83.2 0.4 1.7e-22 79.8 0.0 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|91773501|ref|YP_566193.1| - 2.1e-23 83.2 0.0 7.1e-23 81.5 0.0 2.0 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|91773501|ref|YP_566193.1| - 2.1e-13 50.4 0.0 6.7e-13 48.8 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase PLDc_2 PF13091.6 gi|91773501|ref|YP_566193.1| - 2e-08 34.2 0.6 7.5e-08 32.3 0.2 2.1 2 0 0 2 2 2 1 PLD-like domain SNF2_N PF00176.23 gi|91773501|ref|YP_566193.1| - 7.8e-07 28.1 0.0 1.6e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain ERCC3_RAD25_C PF16203.5 gi|91773501|ref|YP_566193.1| - 8.3e-07 28.5 0.3 1.6e-06 27.5 0.3 1.4 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase SWI2_SNF2 PF18766.1 gi|91773501|ref|YP_566193.1| - 1.3e-05 25.0 0.0 3e-05 23.8 0.0 1.6 1 1 0 1 1 1 1 SWI2/SNF2 ATPase AAA_22 PF13401.6 gi|91773501|ref|YP_566193.1| - 0.082 13.2 0.5 0.7 10.2 0.0 2.5 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|91773501|ref|YP_566193.1| - 0.13 12.0 0.0 0.31 10.7 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|91773502|ref|YP_566194.1| - 3.8e-18 66.7 26.1 3.8e-18 66.7 26.1 4.0 1 1 1 2 2 2 1 AAA domain SMC_N PF02463.19 gi|91773502|ref|YP_566194.1| - 6.2e-05 22.5 0.0 6.2e-05 22.5 0.0 2.6 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 gi|91773502|ref|YP_566194.1| - 0.00079 19.1 3.8 0.00079 19.1 3.8 3.1 3 1 0 3 3 3 1 AAA domain AAA_29 PF13555.6 gi|91773502|ref|YP_566194.1| - 0.0061 16.3 0.0 0.01 15.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|91773502|ref|YP_566194.1| - 0.012 15.4 0.2 0.012 15.4 0.2 3.7 2 2 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system zinc_ribbon_16 PF17034.5 gi|91773502|ref|YP_566194.1| - 0.078 13.2 0.2 0.42 10.8 0.2 2.3 1 0 0 1 1 1 0 Zinc-ribbon like family FAA_hydrolase_N PF09298.11 gi|91773502|ref|YP_566194.1| - 0.1 12.8 0.3 0.34 11.1 0.3 1.9 1 0 0 1 1 1 0 Fumarylacetoacetase N-terminal Phage_Treg PF04761.12 gi|91773502|ref|YP_566194.1| - 0.18 11.9 0.8 1.4 9.1 0.0 2.4 2 0 0 2 2 2 0 Lactococcus bacteriophage putative transcription regulator AAA_15 PF13175.6 gi|91773502|ref|YP_566194.1| - 8.4 6.0 76.6 1.5 8.4 39.4 2.5 1 1 1 2 2 2 0 AAA ATPase domain DNA_methylase PF00145.17 gi|91773503|ref|YP_566195.1| - 1.1e-38 133.4 0.5 1.2e-37 130.0 0.0 2.5 2 1 0 2 2 2 1 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.10 gi|91773503|ref|YP_566195.1| - 0.00097 18.7 0.0 0.0019 17.8 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Acetyltransf_10 PF13673.7 gi|91773504|ref|YP_566196.1| - 9.2e-08 32.1 0.0 5.1e-07 29.7 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|91773504|ref|YP_566196.1| - 1.5e-07 31.6 0.0 2e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|91773504|ref|YP_566196.1| - 5.2e-06 26.8 0.1 1e-05 25.9 0.1 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Bmp PF02608.14 gi|91773504|ref|YP_566196.1| - 0.0065 15.5 0.1 0.0079 15.2 0.1 1.1 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like MMR_HSR1_Xtn PF16897.5 gi|91773505|ref|YP_566197.1| - 2.1e-33 114.5 1.9 3.7e-33 113.7 1.9 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|91773505|ref|YP_566197.1| - 3.5e-21 75.4 0.0 7.4e-21 74.4 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 gi|91773505|ref|YP_566197.1| - 2.2e-17 62.9 0.0 4.3e-17 61.9 0.0 1.5 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|91773505|ref|YP_566197.1| - 1.1e-13 51.0 0.9 3.8e-13 49.3 0.0 2.1 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|91773505|ref|YP_566197.1| - 1.4e-05 25.0 0.8 0.017 15.0 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase cobW PF02492.19 gi|91773505|ref|YP_566197.1| - 0.003 17.2 0.5 2.5 7.7 0.0 2.5 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 gi|91773505|ref|YP_566197.1| - 0.004 17.2 1.0 0.094 12.8 0.1 2.6 2 1 1 3 3 3 1 Dynamin family ATP_bind_1 PF03029.17 gi|91773505|ref|YP_566197.1| - 0.034 13.9 0.8 0.79 9.4 0.1 2.6 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein ABC_tran PF00005.27 gi|91773505|ref|YP_566197.1| - 0.05 14.1 0.1 0.16 12.5 0.0 1.9 2 0 0 2 2 2 0 ABC transporter MeaB PF03308.16 gi|91773505|ref|YP_566197.1| - 0.059 12.3 0.4 0.28 10.1 0.0 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MCM PF00493.23 gi|91773505|ref|YP_566197.1| - 0.088 11.9 0.0 0.41 9.7 0.0 1.9 2 0 0 2 2 2 0 MCM P-loop domain NB-ARC PF00931.22 gi|91773505|ref|YP_566197.1| - 0.14 11.3 0.0 0.31 10.2 0.0 1.7 1 1 0 1 1 1 0 NB-ARC domain GTP_EFTU PF00009.27 gi|91773505|ref|YP_566197.1| - 0.15 11.6 0.3 4 6.9 0.0 2.7 2 1 1 3 3 3 0 Elongation factor Tu GTP binding domain Ras PF00071.22 gi|91773505|ref|YP_566197.1| - 0.17 11.5 0.4 20 4.8 0.0 2.4 2 0 0 2 2 2 0 Ras family MoeA_N PF03453.17 gi|91773506|ref|YP_566198.1| - 1.8e-38 131.8 0.2 3.3e-38 130.9 0.2 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|91773506|ref|YP_566198.1| - 9.5e-26 90.2 0.0 2e-25 89.1 0.0 1.6 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|91773506|ref|YP_566198.1| - 2.8e-09 37.0 0.1 6.7e-09 35.8 0.1 1.7 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) Aminotran_4 PF01063.19 gi|91773507|ref|YP_566199.1| - 8.8e-55 186.0 0.0 1e-54 185.8 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV LAB_N PF07578.11 gi|91773508|ref|YP_566200.1| - 0.051 13.7 0.8 0.051 13.7 0.8 2.0 2 0 0 2 2 2 0 Lipid A Biosynthesis N-terminal domain DUF2070 PF09843.9 gi|91773508|ref|YP_566200.1| - 0.37 9.0 15.1 0.55 8.5 15.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3981 PF13139.6 gi|91773508|ref|YP_566200.1| - 1.7 9.0 8.2 0.29 11.5 2.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3981) DUF4191 PF13829.6 gi|91773508|ref|YP_566200.1| - 2.2 7.5 6.3 7.5 5.8 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) MerC PF03203.14 gi|91773508|ref|YP_566200.1| - 4.5 7.8 10.8 0.68 10.4 2.9 2.5 1 1 1 2 2 2 0 MerC mercury resistance protein S_4TM PF18159.1 gi|91773508|ref|YP_566200.1| - 4.6 6.5 9.4 0.17 11.2 1.2 2.0 2 0 0 2 2 2 0 SMODS-associating 4TM effector domain Phage_holin_2_3 PF16080.5 gi|91773508|ref|YP_566200.1| - 5.2 6.9 7.8 5 7.0 0.2 3.5 4 0 0 4 4 4 0 Bacteriophage holin family HP1 ABC_tran PF00005.27 gi|91773509|ref|YP_566201.1| - 2.1e-33 115.8 0.2 2.7e-33 115.4 0.2 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773509|ref|YP_566201.1| - 3.3e-11 43.6 4.2 3.9e-05 23.6 0.8 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91773509|ref|YP_566201.1| - 8.8e-08 31.8 2.9 4.5e-07 29.5 2.9 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|91773509|ref|YP_566201.1| - 3.3e-05 23.8 0.1 0.00071 19.4 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|91773509|ref|YP_566201.1| - 0.00013 21.7 0.2 0.00048 19.8 0.1 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|91773509|ref|YP_566201.1| - 0.00014 21.7 0.1 0.00035 20.3 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|91773509|ref|YP_566201.1| - 0.00018 21.9 0.0 0.00039 20.8 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|91773509|ref|YP_566201.1| - 0.00048 20.6 0.7 0.0042 17.5 0.7 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|91773509|ref|YP_566201.1| - 0.0009 19.8 0.8 0.0012 19.4 0.8 1.4 1 1 0 1 1 1 1 AAA domain RNA12 PF10443.9 gi|91773509|ref|YP_566201.1| - 0.0026 16.6 0.0 0.0042 15.9 0.0 1.2 1 0 0 1 1 1 1 RNA12 protein NB-ARC PF00931.22 gi|91773509|ref|YP_566201.1| - 0.0027 16.9 0.5 0.004 16.4 0.5 1.5 1 1 0 1 1 1 1 NB-ARC domain AAA_22 PF13401.6 gi|91773509|ref|YP_566201.1| - 0.004 17.4 0.6 0.017 15.4 0.6 2.0 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|91773509|ref|YP_566201.1| - 0.0058 16.4 0.0 0.007 16.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|91773509|ref|YP_566201.1| - 0.012 14.6 0.1 0.018 14.1 0.1 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RuvB_N PF05496.12 gi|91773509|ref|YP_566201.1| - 0.012 15.3 0.8 1.8 8.3 0.0 2.2 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain ATP_bind_1 PF03029.17 gi|91773509|ref|YP_566201.1| - 0.014 15.2 0.4 0.035 13.9 0.0 1.9 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein PIF1 PF05970.14 gi|91773509|ref|YP_566201.1| - 0.032 13.4 0.2 0.14 11.3 0.1 1.9 2 0 0 2 2 2 0 PIF1-like helicase PRK PF00485.18 gi|91773509|ref|YP_566201.1| - 0.035 13.9 0.2 0.056 13.2 0.2 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family ATPase_2 PF01637.18 gi|91773509|ref|YP_566201.1| - 0.036 14.0 0.3 0.093 12.6 0.1 1.7 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_19 PF13245.6 gi|91773509|ref|YP_566201.1| - 0.043 14.1 1.6 0.11 12.9 1.6 1.7 1 1 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 gi|91773509|ref|YP_566201.1| - 0.048 13.8 0.2 0.96 9.6 0.0 2.7 3 0 0 3 3 3 0 Sigma-54 interaction domain AAA_5 PF07728.14 gi|91773509|ref|YP_566201.1| - 0.05 13.6 0.1 0.46 10.5 0.0 2.3 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|91773509|ref|YP_566201.1| - 0.055 13.5 0.4 0.37 10.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 gi|91773509|ref|YP_566201.1| - 0.056 13.2 0.3 0.16 11.7 0.1 2.0 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 gi|91773509|ref|YP_566201.1| - 0.058 13.3 0.4 0.1 12.5 0.1 1.6 2 0 0 2 2 2 0 NACHT domain AAA_13 PF13166.6 gi|91773509|ref|YP_566201.1| - 0.063 11.9 0.9 0.47 9.0 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|91773509|ref|YP_566201.1| - 0.065 13.4 0.0 0.2 11.8 0.0 1.9 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|91773509|ref|YP_566201.1| - 0.071 12.5 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 gi|91773509|ref|YP_566201.1| - 0.073 13.6 0.6 0.18 12.3 0.6 1.9 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|91773509|ref|YP_566201.1| - 0.078 12.9 1.5 0.15 11.9 0.2 2.1 2 1 0 2 2 2 0 NTPase AAA_27 PF13514.6 gi|91773509|ref|YP_566201.1| - 0.079 12.5 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|91773509|ref|YP_566201.1| - 0.13 12.5 0.3 0.45 10.7 0.3 1.9 1 1 0 1 1 1 0 AAA domain DUF1280 PF06918.14 gi|91773509|ref|YP_566201.1| - 0.22 11.1 1.6 0.29 10.7 0.6 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1280) FecCD PF01032.18 gi|91773510|ref|YP_566202.1| - 3.7e-84 282.4 39.5 2.4e-78 263.3 32.6 2.7 1 1 2 3 3 3 2 FecCD transport family Peripla_BP_2 PF01497.18 gi|91773511|ref|YP_566203.1| - 7e-42 143.6 0.2 8.8e-42 143.3 0.2 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Radical_SAM PF04055.21 gi|91773511|ref|YP_566203.1| - 0.1 13.0 0.1 0.18 12.2 0.1 1.3 1 0 0 1 1 1 0 Radical SAM superfamily PGF-CTERM PF18204.1 gi|91773511|ref|YP_566203.1| - 0.17 11.9 0.3 0.33 11.0 0.3 1.5 1 0 0 1 1 1 0 PGF-CTERM motif DUF4430 PF14478.6 gi|91773512|ref|YP_566204.1| - 2.2e-18 66.6 11.6 2.4e-05 24.8 0.3 3.6 3 0 0 3 3 3 3 Domain of unknown function (DUF4430) PGF-CTERM PF18204.1 gi|91773512|ref|YP_566204.1| - 6.1e-06 26.0 4.8 1.1e-05 25.3 0.1 2.3 2 0 0 2 2 2 1 PGF-CTERM motif OspE PF02471.17 gi|91773512|ref|YP_566204.1| - 0.0019 18.4 0.2 18 5.6 0.0 3.3 3 0 0 3 3 3 3 Borrelia outer surface protein E Rax2 PF12768.7 gi|91773512|ref|YP_566204.1| - 8.5 5.8 10.3 3.4 7.1 0.2 3.0 3 0 0 3 3 3 0 Cortical protein marker for cell polarity PQQ_2 PF13360.6 gi|91773513|ref|YP_566205.1| - 1.1e-28 100.4 1.5 1.1e-11 44.7 0.0 2.5 1 1 2 3 3 3 3 PQQ-like domain PQQ_3 PF13570.6 gi|91773513|ref|YP_566205.1| - 5.5e-28 96.7 18.3 3.4e-05 24.2 0.0 8.3 8 0 0 8 8 8 7 PQQ-like domain PQQ PF01011.21 gi|91773513|ref|YP_566205.1| - 6e-13 48.0 17.9 1.7e-08 34.0 0.1 7.7 9 0 0 9 9 9 2 PQQ enzyme repeat PGF-CTERM PF18204.1 gi|91773513|ref|YP_566205.1| - 0.024 14.6 1.2 0.029 14.3 0.0 1.8 2 0 0 2 2 2 0 PGF-CTERM motif PQQ_3 PF13570.6 gi|91773514|ref|YP_566206.1| - 4.3e-69 227.4 43.0 5.7e-08 33.0 0.3 16.2 15 1 1 16 16 16 13 PQQ-like domain PQQ_2 PF13360.6 gi|91773514|ref|YP_566206.1| - 2.3e-64 217.2 6.8 7.6e-17 61.7 0.1 6.6 2 2 4 6 6 6 5 PQQ-like domain PQQ PF01011.21 gi|91773514|ref|YP_566206.1| - 5.8e-40 133.4 40.6 0.00018 21.3 0.5 14.2 15 0 0 15 15 15 10 PQQ enzyme repeat Pepsin-I3 PF06394.13 gi|91773514|ref|YP_566206.1| - 0.035 14.3 0.0 0.15 12.3 0.0 2.1 1 0 0 1 1 1 0 Pepsin inhibitor-3-like repeated domain Kelch_6 PF13964.6 gi|91773514|ref|YP_566206.1| - 0.74 10.2 11.2 5 7.6 0.1 6.5 7 0 0 7 7 7 0 Kelch motif PGF-CTERM PF18204.1 gi|91773514|ref|YP_566206.1| - 2.1 8.4 3.6 12 6.0 3.6 2.1 1 1 0 1 1 1 0 PGF-CTERM motif ABC_tran PF00005.27 gi|91773515|ref|YP_566207.1| - 2.8e-29 102.4 0.0 4.9e-29 101.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773515|ref|YP_566207.1| - 1.1e-10 41.9 0.3 3.4e-06 27.1 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 gi|91773515|ref|YP_566207.1| - 2e-08 34.3 0.0 6.4e-08 32.7 0.0 1.9 2 0 0 2 2 2 1 TOBE domain SMC_N PF02463.19 gi|91773515|ref|YP_566207.1| - 0.00027 20.4 0.0 0.013 15.0 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|91773515|ref|YP_566207.1| - 0.0009 19.8 0.0 0.0014 19.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain TOBE PF03459.17 gi|91773515|ref|YP_566207.1| - 0.0032 17.7 0.1 0.0061 16.8 0.1 1.5 1 0 0 1 1 1 1 TOBE domain AAA_16 PF13191.6 gi|91773515|ref|YP_566207.1| - 0.013 15.9 0.0 0.026 14.9 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|91773515|ref|YP_566207.1| - 0.016 15.5 0.4 0.052 13.8 0.4 1.9 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|91773515|ref|YP_566207.1| - 0.055 13.2 0.0 0.097 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|91773515|ref|YP_566207.1| - 0.064 13.5 0.5 0.68 10.2 0.5 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|91773515|ref|YP_566207.1| - 0.07 12.9 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|91773515|ref|YP_566207.1| - 0.095 13.1 0.0 1 9.8 0.0 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|91773515|ref|YP_566207.1| - 0.11 12.4 0.0 0.26 11.2 0.0 1.5 2 0 0 2 2 2 0 RsgA GTPase BPD_transp_1 PF00528.22 gi|91773516|ref|YP_566208.1| - 3.3e-21 75.8 17.5 4.1e-21 75.5 17.5 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.6 gi|91773517|ref|YP_566209.1| - 1e-47 162.8 0.0 1.2e-47 162.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|91773517|ref|YP_566209.1| - 2.4e-15 57.3 0.0 2.1e-13 50.9 0.0 2.0 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Phosphonate-bd PF12974.7 gi|91773517|ref|YP_566209.1| - 2.2e-05 24.2 0.3 2.9e-05 23.8 0.3 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_6 PF13343.6 gi|91773517|ref|YP_566209.1| - 0.0048 16.3 0.1 0.0074 15.7 0.1 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein OpuAC PF04069.12 gi|91773517|ref|YP_566209.1| - 0.016 14.8 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system SBP_bac_8 PF13416.6 gi|91773517|ref|YP_566209.1| - 0.019 14.8 0.2 0.037 13.8 0.2 1.7 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein DUF4404 PF14357.6 gi|91773517|ref|YP_566209.1| - 0.056 14.1 0.0 0.12 13.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) 4HBT PF03061.22 gi|91773519|ref|YP_566211.1| - 1.3e-09 38.3 0.1 1.7e-09 37.9 0.1 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|91773519|ref|YP_566211.1| - 0.00059 20.0 0.2 0.0008 19.5 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) PS-DH PF14765.6 gi|91773519|ref|YP_566211.1| - 0.0049 16.1 0.0 0.0064 15.8 0.0 1.2 1 0 0 1 1 1 1 Polyketide synthase dehydratase HAD_2 PF13419.6 gi|91773520|ref|YP_566212.1| - 3e-29 102.4 0.0 3.7e-29 102.1 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|91773520|ref|YP_566212.1| - 7.3e-14 52.6 0.2 1.7e-12 48.1 0.2 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|91773520|ref|YP_566212.1| - 5.3e-05 23.2 0.0 0.00012 22.1 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|91773520|ref|YP_566212.1| - 0.0019 18.7 0.1 0.0036 17.7 0.1 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Response_reg PF00072.24 gi|91773521|ref|YP_566213.1| - 9.7e-25 86.9 0.1 1.1e-24 86.7 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Rhodanese PF00581.20 gi|91773522|ref|YP_566214.1| - 5.5e-19 68.7 0.0 7.1e-19 68.3 0.0 1.2 1 0 0 1 1 1 1 Rhodanese-like domain DUF4307 PF14155.6 gi|91773522|ref|YP_566214.1| - 0.021 14.7 0.0 0.045 13.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF2769 PF10967.8 gi|91773523|ref|YP_566215.1| - 1.9e-12 47.6 10.4 1.9e-12 47.6 10.4 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2769) Fibrillarin PF01269.17 gi|91773524|ref|YP_566216.1| - 2.8e-93 311.2 0.1 3.1e-93 311.0 0.1 1.0 1 0 0 1 1 1 1 Fibrillarin GCD14 PF08704.10 gi|91773524|ref|YP_566216.1| - 0.0016 18.2 0.0 0.0021 17.8 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Nop PF01798.18 gi|91773525|ref|YP_566217.1| - 4.2e-53 180.2 0.0 5.7e-53 179.7 0.0 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin Transcrip_reg PF01709.20 gi|91773525|ref|YP_566217.1| - 1.8 7.9 3.4 26 4.1 0.6 2.3 2 1 0 2 2 2 0 Transcriptional regulator GHMP_kinases_C PF08544.13 gi|91773526|ref|YP_566218.1| - 8.9e-09 35.6 0.0 2e-08 34.5 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 gi|91773526|ref|YP_566218.1| - 4.9e-07 29.9 3.8 1.1e-06 28.8 3.8 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain DUF2953 PF11167.8 gi|91773527|ref|YP_566219.1| - 5.4e-12 45.6 0.0 2.1e-11 43.7 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2953) DUF4834 PF16118.5 gi|91773527|ref|YP_566219.1| - 0.072 14.1 0.0 0.14 13.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Spore_YtfJ PF09579.10 gi|91773528|ref|YP_566220.1| - 1.8e-26 92.1 3.3 2.5e-26 91.6 3.3 1.2 1 0 0 1 1 1 1 Sporulation protein YtfJ (Spore_YtfJ) Helicase_C_2 PF13307.6 gi|91773529|ref|YP_566221.1| - 4.7e-27 95.2 0.0 1.5e-26 93.6 0.0 1.9 2 0 0 2 2 2 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|91773529|ref|YP_566221.1| - 2.4e-19 69.6 3.7 6.6e-19 68.2 3.7 1.7 1 1 0 1 1 1 1 DEAD_2 ResIII PF04851.15 gi|91773529|ref|YP_566221.1| - 8.3e-08 32.4 4.1 0.00037 20.6 0.2 3.2 3 0 0 3 3 3 2 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|91773529|ref|YP_566221.1| - 1.3e-07 31.6 0.7 0.00014 21.7 0.2 3.2 3 0 0 3 3 3 1 DEAD/DEAH box helicase PhoH PF02562.16 gi|91773529|ref|YP_566221.1| - 0.00055 19.4 0.2 0.0093 15.4 0.1 2.5 2 0 0 2 2 2 1 PhoH-like protein DUF2075 PF09848.9 gi|91773529|ref|YP_566221.1| - 0.0016 17.7 0.3 0.32 10.2 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) HBB PF06777.11 gi|91773529|ref|YP_566221.1| - 0.0067 16.1 0.1 0.017 14.8 0.1 1.6 1 0 0 1 1 1 1 Helical and beta-bridge domain Zot PF05707.12 gi|91773529|ref|YP_566221.1| - 0.012 15.3 0.1 0.75 9.4 0.0 2.4 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_30 PF13604.6 gi|91773529|ref|YP_566221.1| - 0.074 12.8 0.3 0.26 11.0 0.1 2.0 3 0 0 3 3 3 0 AAA domain ATPase PF06745.13 gi|91773529|ref|YP_566221.1| - 0.081 12.3 0.5 0.15 11.3 0.1 1.6 2 0 0 2 2 2 0 KaiC AAA_34 PF13872.6 gi|91773529|ref|YP_566221.1| - 0.098 11.5 0.0 0.17 10.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 AAA PF00004.29 gi|91773529|ref|YP_566221.1| - 0.39 11.1 3.2 48 4.4 1.1 3.7 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) Pilin_N PF07790.11 gi|91773530|ref|YP_566222.1| - 5e-18 65.8 4.8 5e-18 65.8 2.2 2.0 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Fer4 PF00037.27 gi|91773531|ref|YP_566223.1| - 3e-18 64.8 18.7 1.5e-09 37.3 5.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91773531|ref|YP_566223.1| - 4.3e-14 52.3 24.9 2e-10 40.6 13.5 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91773531|ref|YP_566223.1| - 1e-12 48.0 13.7 1.1e-12 47.9 13.7 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773531|ref|YP_566223.1| - 3.7e-12 45.8 20.4 3.9e-06 26.7 7.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773531|ref|YP_566223.1| - 1e-11 44.8 11.0 1.3e-11 44.4 11.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773531|ref|YP_566223.1| - 3.1e-11 43.7 11.8 8e-11 42.4 12.1 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773531|ref|YP_566223.1| - 5.9e-11 41.8 16.2 1.7e-05 24.6 4.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91773531|ref|YP_566223.1| - 1e-10 42.4 10.2 2.8e-05 25.0 2.3 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|91773531|ref|YP_566223.1| - 3.7e-10 39.5 14.2 2.6e-05 24.4 3.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91773531|ref|YP_566223.1| - 2.8e-06 27.7 12.8 0.0015 19.0 1.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91773531|ref|YP_566223.1| - 7e-06 26.4 13.2 0.0064 16.9 3.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91773531|ref|YP_566223.1| - 2.5e-05 24.9 16.7 0.00086 20.1 3.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|91773531|ref|YP_566223.1| - 4.3e-05 24.3 9.6 0.0097 16.7 1.9 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773531|ref|YP_566223.1| - 0.00011 22.6 22.4 0.069 13.7 5.9 3.0 2 2 1 3 3 3 3 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|91773531|ref|YP_566223.1| - 0.00011 22.8 16.7 0.00044 20.9 3.1 2.9 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|91773531|ref|YP_566223.1| - 0.00038 20.6 14.6 0.0044 17.2 3.4 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|91773531|ref|YP_566223.1| - 0.012 15.7 5.3 0.014 15.5 5.3 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Furin-like_2 PF15913.5 gi|91773531|ref|YP_566223.1| - 0.018 15.2 3.5 0.24 11.5 3.8 1.9 1 1 1 2 2 2 0 Furin-like repeat, cysteine-rich ETF_QO PF05187.13 gi|91773531|ref|YP_566223.1| - 0.11 12.7 7.5 1.9 8.7 0.7 2.0 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S AA_kinase PF00696.28 gi|91773532|ref|YP_566224.1| - 2.5e-29 102.5 4.1 5.4e-29 101.5 4.1 1.5 1 1 0 1 1 1 1 Amino acid kinase family SKI PF01202.22 gi|91773532|ref|YP_566224.1| - 0.035 14.2 0.1 0.12 12.5 0.0 2.0 2 0 0 2 2 2 0 Shikimate kinase AlaDh_PNT_C PF01262.21 gi|91773532|ref|YP_566224.1| - 1.3 8.3 10.0 0.11 11.7 1.5 2.3 1 1 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Arch_fla_DE PF04659.13 gi|91773533|ref|YP_566225.1| - 7.5e-29 99.5 0.1 2.1e-28 98.0 0.1 1.8 1 0 0 1 1 1 1 Archaeal flagella protein FlaC_arch PF05377.11 gi|91773533|ref|YP_566225.1| - 2.3e-21 75.9 4.0 2.3e-21 75.9 4.0 5.1 4 1 1 5 5 5 2 Flagella accessory protein C (FlaC) DUF1664 PF07889.12 gi|91773533|ref|YP_566225.1| - 0.00027 20.9 14.8 0.045 13.8 3.0 3.4 2 1 1 3 3 3 2 Protein of unknown function (DUF1664) NPV_P10 PF05531.12 gi|91773533|ref|YP_566225.1| - 0.026 15.0 18.3 0.49 10.9 3.6 3.4 1 1 2 4 4 4 0 Nucleopolyhedrovirus P10 protein Sec34 PF04136.15 gi|91773533|ref|YP_566225.1| - 0.31 10.9 12.5 0.93 9.4 1.6 3.1 2 1 2 4 4 3 0 Sec34-like family MCPsignal PF00015.21 gi|91773533|ref|YP_566225.1| - 0.35 10.7 16.1 0.8 9.5 3.2 3.0 1 1 2 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain GAS PF13851.6 gi|91773533|ref|YP_566225.1| - 0.48 9.8 17.4 1.1 8.6 6.2 2.3 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Nup54 PF13874.6 gi|91773533|ref|YP_566225.1| - 1.2 9.2 8.0 1.1e+02 2.9 8.0 2.6 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 DUF724 PF05266.14 gi|91773533|ref|YP_566225.1| - 1.4 8.7 18.4 1.4 8.7 1.8 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF724) Tropomyosin_1 PF12718.7 gi|91773533|ref|YP_566225.1| - 1.7 8.8 20.3 0.037 14.2 2.3 2.8 2 1 0 2 2 2 0 Tropomyosin like ABC_tran_CTD PF16326.5 gi|91773533|ref|YP_566225.1| - 2 8.7 14.2 2.4 8.5 0.5 4.0 3 1 1 4 4 4 0 ABC transporter C-terminal domain NleF_casp_inhib PF16809.5 gi|91773533|ref|YP_566225.1| - 2.1 8.2 18.1 0.22 11.4 3.8 2.8 2 1 1 3 3 3 0 NleF caspase inhibitor BLOC1_2 PF10046.9 gi|91773533|ref|YP_566225.1| - 2.3 8.6 16.2 5.4 7.4 1.9 3.5 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CENP-F_leu_zip PF10473.9 gi|91773533|ref|YP_566225.1| - 2.4 8.2 18.8 4.9 7.2 2.8 2.5 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Lebercilin PF15619.6 gi|91773533|ref|YP_566225.1| - 3.2 7.4 13.0 0.37 10.4 0.5 2.6 2 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Prominin PF05478.11 gi|91773533|ref|YP_566225.1| - 4.4 5.1 10.2 6.6 4.5 10.2 1.2 1 0 0 1 1 1 0 Prominin Snapin_Pallidin PF14712.6 gi|91773533|ref|YP_566225.1| - 7.7 7.0 12.2 3.4 8.1 0.3 3.5 3 1 1 4 4 3 0 Snapin/Pallidin ZapB PF06005.12 gi|91773533|ref|YP_566225.1| - 8.3 6.9 19.3 14 6.2 0.1 3.5 2 1 1 3 3 3 0 Cell division protein ZapB V_ATPase_I PF01496.19 gi|91773533|ref|YP_566225.1| - 9.4 4.0 17.0 1.9 6.3 9.3 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Arch_flagellin PF01917.16 gi|91773534|ref|YP_566226.1| - 0.00021 21.5 3.9 0.00026 21.2 3.9 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin AbrB_C PF18277.1 gi|91773534|ref|YP_566226.1| - 0.11 12.2 0.6 0.18 11.4 0.6 1.4 1 0 0 1 1 1 0 AbrB C-terminal domain Arch_flagellin PF01917.16 gi|91773535|ref|YP_566227.1| - 2.9e-29 102.3 0.2 3.3e-29 102.2 0.2 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin Dexa_ind PF15198.6 gi|91773535|ref|YP_566227.1| - 0.036 14.2 2.9 2 8.6 0.2 2.7 2 1 0 2 2 2 0 Dexamethasone-induced HlyD_2 PF12700.7 gi|91773535|ref|YP_566227.1| - 0.079 11.7 0.3 0.1 11.3 0.3 1.1 1 0 0 1 1 1 0 HlyD family secretion protein TPPK_C PF12555.8 gi|91773535|ref|YP_566227.1| - 0.097 12.7 1.0 0.22 11.6 0.5 1.8 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal ATPase PF06745.13 gi|91773536|ref|YP_566228.1| - 2.7e-17 62.9 0.4 3.4e-17 62.6 0.4 1.1 1 0 0 1 1 1 1 KaiC DnaB_C PF03796.15 gi|91773536|ref|YP_566228.1| - 0.00043 19.7 0.0 0.00086 18.7 0.0 1.5 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_25 PF13481.6 gi|91773536|ref|YP_566228.1| - 0.0021 17.7 0.0 0.46 10.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.27 gi|91773536|ref|YP_566228.1| - 0.0041 17.6 0.1 0.0066 17.0 0.1 1.4 1 0 0 1 1 1 1 ABC transporter IstB_IS21 PF01695.17 gi|91773536|ref|YP_566228.1| - 0.013 15.3 0.4 0.057 13.1 0.1 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein RecA PF00154.21 gi|91773536|ref|YP_566228.1| - 0.015 14.8 0.2 0.054 13.0 0.0 1.8 2 0 0 2 2 2 0 recA bacterial DNA recombination protein AAA_24 PF13479.6 gi|91773536|ref|YP_566228.1| - 0.024 14.3 0.2 0.078 12.7 0.2 1.9 1 1 0 1 1 1 0 AAA domain Rad51 PF08423.11 gi|91773536|ref|YP_566228.1| - 0.032 13.5 0.3 0.053 12.8 0.3 1.3 1 0 0 1 1 1 0 Rad51 NACHT PF05729.12 gi|91773536|ref|YP_566228.1| - 0.042 13.8 0.1 0.074 13.0 0.1 1.6 1 1 0 1 1 1 0 NACHT domain AAA_22 PF13401.6 gi|91773536|ref|YP_566228.1| - 0.052 13.8 0.5 0.15 12.4 0.5 1.7 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|91773536|ref|YP_566228.1| - 0.061 13.8 1.1 0.091 13.2 1.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|91773536|ref|YP_566228.1| - 0.08 13.5 0.2 0.19 12.3 0.2 1.7 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|91773536|ref|YP_566228.1| - 0.11 12.4 3.4 1.6 8.6 0.8 2.3 2 0 0 2 2 2 0 NTPase AAA_28 PF13521.6 gi|91773536|ref|YP_566228.1| - 0.27 11.5 0.4 0.41 10.9 0.4 1.3 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|91773537|ref|YP_566229.1| - 3.5e-44 150.9 0.0 4.9e-44 150.4 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|91773537|ref|YP_566229.1| - 0.013 15.2 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Microtub_bd PF16796.5 gi|91773537|ref|YP_566229.1| - 0.051 13.5 0.1 0.23 11.4 0.1 1.9 1 1 1 2 2 2 0 Microtubule binding AAA_7 PF12775.7 gi|91773537|ref|YP_566229.1| - 0.11 12.1 0.1 0.31 10.5 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_16 PF13191.6 gi|91773537|ref|YP_566229.1| - 0.13 12.6 0.0 0.24 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain T2SSF PF00482.23 gi|91773538|ref|YP_566230.1| - 3.6e-17 62.5 0.0 2.8e-12 46.7 0.1 3.6 5 0 0 5 5 5 2 Type II secretion system (T2SS), protein F Aconitase_C PF00694.19 gi|91773540|ref|YP_566232.1| - 4.2e-18 65.9 0.0 8e-18 65.0 0.0 1.4 1 1 0 1 1 1 1 Aconitase C-terminal domain STT3 PF02516.14 gi|91773541|ref|YP_566233.1| - 9.8e-30 103.9 33.5 3.9e-29 101.9 33.5 1.9 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit AglB_L1 PF18079.1 gi|91773541|ref|YP_566233.1| - 3e-27 94.7 0.8 6.1e-27 93.7 0.8 1.6 1 0 0 1 1 1 1 Archaeal glycosylation protein B long peripheral domain 7tm_7 PF08395.12 gi|91773541|ref|YP_566233.1| - 0.0089 15.3 1.6 0.0089 15.3 1.6 2.5 3 0 0 3 3 3 2 7tm Chemosensory receptor Asn_synthase PF00733.21 gi|91773542|ref|YP_566234.1| - 1.5e-93 314.3 0.0 1.8e-93 314.0 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 gi|91773542|ref|YP_566234.1| - 1.7e-50 170.0 0.0 3e-50 169.2 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|91773542|ref|YP_566234.1| - 4e-45 153.3 0.0 7.1e-45 152.5 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain DUF3700 PF12481.8 gi|91773542|ref|YP_566234.1| - 5e-06 26.1 0.0 1.1e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Aluminium induced protein DUF1933 PF09147.10 gi|91773542|ref|YP_566234.1| - 0.0019 17.8 0.0 0.0033 17.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1933) QueC PF06508.13 gi|91773542|ref|YP_566234.1| - 0.011 15.2 0.0 0.021 14.3 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|91773542|ref|YP_566234.1| - 0.04 13.0 0.0 0.079 12.1 0.0 1.5 1 0 0 1 1 1 0 NAD synthase Glycos_transf_1 PF00534.20 gi|91773543|ref|YP_566235.1| - 3.3e-35 121.1 0.0 4.8e-35 120.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|91773543|ref|YP_566235.1| - 1.5e-27 96.7 0.0 2.4e-27 96.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|91773543|ref|YP_566235.1| - 2.6e-22 79.3 1.2 2.6e-22 79.3 1.2 2.0 3 0 0 3 3 3 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|91773543|ref|YP_566235.1| - 7.8e-20 71.6 0.5 1.3e-19 70.9 0.5 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|91773543|ref|YP_566235.1| - 6.8e-13 49.4 0.0 9.4e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|91773543|ref|YP_566235.1| - 4e-08 33.6 0.0 8.6e-08 32.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 PDH PF02153.17 gi|91773543|ref|YP_566235.1| - 0.14 11.1 0.0 0.23 10.4 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase Epimerase PF01370.21 gi|91773544|ref|YP_566236.1| - 9.6e-48 162.7 0.0 1.3e-47 162.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|91773544|ref|YP_566236.1| - 2e-45 155.7 0.0 5.2e-43 147.7 0.0 2.2 1 1 1 2 2 2 2 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|91773544|ref|YP_566236.1| - 8.5e-17 61.2 0.0 1.2e-16 60.6 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|91773544|ref|YP_566236.1| - 8.6e-15 54.5 0.0 4.2e-13 48.9 0.0 2.1 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|91773544|ref|YP_566236.1| - 1.8e-11 43.7 0.0 7.8e-10 38.4 0.0 2.6 1 1 1 2 2 2 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|91773544|ref|YP_566236.1| - 3.8e-09 36.1 0.0 6.6e-08 32.0 0.0 2.5 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein FERM_F1 PF18379.1 gi|91773544|ref|YP_566236.1| - 0.063 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 FERM F1 ubiquitin-like domain GDP_Man_Dehyd PF16363.5 gi|91773545|ref|YP_566237.1| - 1.4e-61 208.8 0.0 1.7e-61 208.4 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|91773545|ref|YP_566237.1| - 8.2e-50 169.5 0.0 1e-49 169.2 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|91773545|ref|YP_566237.1| - 5.8e-25 87.8 0.0 8.1e-25 87.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|91773545|ref|YP_566237.1| - 5.7e-17 61.7 0.0 3.7e-16 59.1 0.0 2.2 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|91773545|ref|YP_566237.1| - 1.3e-15 57.3 0.2 5e-15 55.4 0.2 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|91773545|ref|YP_566237.1| - 3.9e-10 39.9 0.0 5.4e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|91773545|ref|YP_566237.1| - 4.3e-09 35.9 0.0 5.5e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain adh_short PF00106.25 gi|91773545|ref|YP_566237.1| - 2.9e-08 33.4 0.4 4.2e-07 29.6 0.4 2.6 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 gi|91773545|ref|YP_566237.1| - 8.5e-05 22.2 0.2 0.0013 18.3 0.2 2.1 1 1 0 1 1 1 1 NmrA-like family KR PF08659.10 gi|91773545|ref|YP_566237.1| - 0.022 14.7 0.0 0.073 13.0 0.0 1.9 1 1 0 1 1 1 0 KR domain Sacchrp_dh_NADP PF03435.18 gi|91773545|ref|YP_566237.1| - 0.07 13.4 0.1 1.1 9.5 0.0 2.2 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain NTP_transferase PF00483.23 gi|91773546|ref|YP_566238.1| - 2.7e-43 148.3 0.0 3.4e-43 148.0 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|91773546|ref|YP_566238.1| - 9.3e-10 39.1 0.0 1.1e-09 38.8 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF3963 PF13124.6 gi|91773546|ref|YP_566238.1| - 0.01 15.8 0.0 0.026 14.5 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3963) CTP_transf_3 PF02348.19 gi|91773547|ref|YP_566239.1| - 7.6e-28 97.9 0.0 8.3e-28 97.8 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transf_3 PF12804.7 gi|91773547|ref|YP_566239.1| - 0.003 17.9 0.0 0.0036 17.7 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|91773547|ref|YP_566239.1| - 0.004 16.9 0.0 0.0054 16.5 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.23 gi|91773547|ref|YP_566239.1| - 0.055 13.0 0.0 0.079 12.5 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase NeuB PF03102.14 gi|91773548|ref|YP_566240.1| - 1e-103 346.0 0.6 1.2e-103 345.7 0.6 1.1 1 0 0 1 1 1 1 NeuB family SAF PF08666.12 gi|91773548|ref|YP_566240.1| - 1.2e-08 35.4 0.0 2.4e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 SAF domain Epimerase_2 PF02350.19 gi|91773549|ref|YP_566241.1| - 1e-91 307.4 0.2 1.1e-91 307.2 0.2 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase PglD_N PF17836.1 gi|91773550|ref|YP_566242.1| - 4.8e-17 62.4 4.3 4.8e-17 62.4 4.3 1.7 2 0 0 2 2 2 1 PglD N-terminal domain Hexapep PF00132.24 gi|91773550|ref|YP_566242.1| - 9e-17 60.1 48.7 3.1e-06 26.7 6.5 4.8 2 1 4 6 6 6 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|91773550|ref|YP_566242.1| - 3e-05 23.7 7.3 3e-05 23.7 7.3 4.7 5 1 1 6 6 6 3 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|91773550|ref|YP_566242.1| - 0.35 9.8 1.6 0.86 8.5 0.8 2.1 1 1 1 2 2 2 0 L-fucokinase DegT_DnrJ_EryC1 PF01041.17 gi|91773551|ref|YP_566243.1| - 6.7e-130 433.6 0.0 7.6e-130 433.4 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|91773551|ref|YP_566243.1| - 1.2e-06 28.0 0.0 1.9e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|91773551|ref|YP_566243.1| - 7e-06 25.5 0.1 1.9e-05 24.1 0.1 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|91773551|ref|YP_566243.1| - 3.1e-05 22.7 0.0 4.8e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|91773551|ref|YP_566243.1| - 0.00063 18.8 0.0 0.0012 17.8 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V ComK PF06338.11 gi|91773551|ref|YP_566243.1| - 0.0089 15.7 0.0 0.02 14.5 0.0 1.5 1 0 0 1 1 1 1 ComK protein Methyltransf_21 PF05050.12 gi|91773552|ref|YP_566244.1| - 4.5e-13 49.6 0.8 5.4e-12 46.1 0.8 2.2 1 1 0 1 1 1 1 Methyltransferase FkbM domain Met_10 PF02475.16 gi|91773552|ref|YP_566244.1| - 2.3e-06 27.5 0.1 3.8e-06 26.8 0.1 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_22 PF13383.6 gi|91773552|ref|YP_566244.1| - 3.3e-05 23.6 0.0 5.1e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|91773552|ref|YP_566244.1| - 0.00052 19.2 0.0 0.00081 18.5 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase FtsJ PF01728.19 gi|91773552|ref|YP_566244.1| - 0.013 15.6 0.0 0.019 15.1 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase DREV PF05219.12 gi|91773552|ref|YP_566244.1| - 0.028 13.5 0.0 0.06 12.4 0.0 1.5 1 1 0 1 1 1 0 DREV methyltransferase Polysacc_synt_2 PF02719.15 gi|91773553|ref|YP_566245.1| - 5.2e-112 373.8 0.4 6.5e-112 373.5 0.4 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.21 gi|91773553|ref|YP_566245.1| - 8.4e-28 97.4 0.0 7.3e-27 94.4 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|91773553|ref|YP_566245.1| - 9.7e-24 83.8 0.1 2.4e-21 76.0 0.1 2.2 1 1 1 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 gi|91773553|ref|YP_566245.1| - 2.9e-19 69.6 0.0 5e-19 68.9 0.0 1.4 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 gi|91773553|ref|YP_566245.1| - 3.3e-13 49.9 0.0 5.2e-13 49.3 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|91773553|ref|YP_566245.1| - 4.8e-13 48.9 0.0 1.3e-11 44.1 0.0 2.1 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|91773553|ref|YP_566245.1| - 8.9e-10 38.2 0.3 1.1e-07 31.3 0.3 2.9 1 1 1 2 2 2 1 Male sterility protein NmrA PF05368.13 gi|91773553|ref|YP_566245.1| - 1.1e-08 35.0 0.0 2.1e-08 34.0 0.0 1.5 1 1 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|91773553|ref|YP_566245.1| - 6e-08 32.4 0.1 1.2e-07 31.4 0.1 1.5 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|91773553|ref|YP_566245.1| - 2.9e-05 24.1 0.0 4.7e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 KR domain Shikimate_DH PF01488.20 gi|91773553|ref|YP_566245.1| - 0.00074 19.6 0.7 0.0025 17.9 0.2 2.0 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|91773553|ref|YP_566245.1| - 0.0019 18.5 0.1 0.0061 16.8 0.0 1.9 2 0 0 2 2 1 1 Saccharopine dehydrogenase NADP binding domain Semialdhyde_dh PF01118.24 gi|91773553|ref|YP_566245.1| - 0.002 18.5 0.0 0.0045 17.4 0.0 1.7 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Polysacc_syn_2C PF08485.10 gi|91773553|ref|YP_566245.1| - 0.041 13.6 0.3 0.11 12.3 0.3 1.6 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein C-terminal DapB_N PF01113.20 gi|91773553|ref|YP_566245.1| - 0.046 13.9 0.0 0.11 12.7 0.0 1.7 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus TrkA_N PF02254.18 gi|91773553|ref|YP_566245.1| - 0.068 13.4 0.2 0.22 11.8 0.2 2.0 1 1 0 1 1 1 0 TrkA-N domain Methyltransf_31 PF13847.6 gi|91773553|ref|YP_566245.1| - 0.11 12.3 0.2 0.38 10.5 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Polysacc_synt_C PF14667.6 gi|91773555|ref|YP_566247.1| - 1.1e-23 83.9 18.7 1.1e-23 83.9 18.7 3.9 4 1 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.6 gi|91773555|ref|YP_566247.1| - 3.5e-17 62.6 12.4 3.5e-17 62.6 12.4 2.1 2 2 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|91773555|ref|YP_566247.1| - 3.9e-17 62.5 25.2 3.9e-17 62.5 25.2 2.2 1 1 0 2 2 2 1 Polysaccharide biosynthesis protein MatE PF01554.18 gi|91773555|ref|YP_566247.1| - 1.5e-07 31.3 8.2 1.5e-07 31.3 8.2 3.6 3 1 0 3 3 3 1 MatE MurJ PF03023.14 gi|91773555|ref|YP_566247.1| - 2.3e-07 29.8 35.3 4.4e-06 25.6 35.3 2.1 1 1 0 1 1 1 1 Lipid II flippase MurJ EcsB PF05975.12 gi|91773555|ref|YP_566247.1| - 1.4 7.7 35.8 0.12 11.2 9.7 3.4 3 1 0 3 3 3 0 Bacterial ABC transporter protein EcsB CTP_transf_3 PF02348.19 gi|91773556|ref|YP_566248.1| - 1.2e-26 94.0 0.8 1.4e-26 93.8 0.8 1.0 1 0 0 1 1 1 1 Cytidylyltransferase HpcH_HpaI PF03328.14 gi|91773557|ref|YP_566249.1| - 1.7e-37 128.7 0.0 2e-37 128.5 0.0 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 gi|91773557|ref|YP_566249.1| - 0.56 9.0 3.6 0.28 10.0 0.1 1.9 2 0 0 2 2 2 0 Pyruvate kinase, barrel domain 2-Hacid_dh_C PF02826.19 gi|91773558|ref|YP_566250.1| - 1.3e-52 177.8 0.0 2e-51 173.9 0.0 2.0 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|91773558|ref|YP_566250.1| - 7.5e-27 93.6 0.0 9.3e-27 93.3 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 gi|91773558|ref|YP_566250.1| - 7e-05 22.9 0.1 0.00027 21.0 0.0 1.9 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.15 gi|91773558|ref|YP_566250.1| - 0.07 13.3 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Gp_dh_N PF00044.24 gi|91773558|ref|YP_566250.1| - 0.092 13.1 0.5 0.4 11.0 0.5 2.3 1 1 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|91773558|ref|YP_566250.1| - 0.096 12.9 0.0 0.4 10.9 0.0 2.1 2 0 0 2 2 2 0 TrkA-N domain Epimerase PF01370.21 gi|91773559|ref|YP_566251.1| - 2.7e-41 141.6 0.3 1.4e-40 139.2 0.3 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|91773559|ref|YP_566251.1| - 1.1e-29 103.9 1.0 1.3e-27 97.1 1.0 2.3 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|91773559|ref|YP_566251.1| - 2e-17 63.1 3.7 6.7e-16 58.1 3.7 2.1 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|91773559|ref|YP_566251.1| - 3.1e-15 56.1 0.4 1.2e-14 54.2 0.4 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|91773559|ref|YP_566251.1| - 1.1e-14 54.2 0.0 1.5e-13 50.5 0.0 2.0 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|91773559|ref|YP_566251.1| - 1.7e-13 50.4 1.9 5.5e-05 22.5 0.0 3.2 1 1 2 3 3 3 3 Male sterility protein NAD_binding_10 PF13460.6 gi|91773559|ref|YP_566251.1| - 9.6e-13 48.4 0.0 1.9e-12 47.5 0.0 1.5 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|91773559|ref|YP_566251.1| - 8.3e-09 35.3 0.1 2.5e-08 33.8 0.1 1.7 1 1 0 1 1 1 1 NmrA-like family DUF4378 PF14309.6 gi|91773559|ref|YP_566251.1| - 0.024 15.0 0.0 0.042 14.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4378) adh_short PF00106.25 gi|91773559|ref|YP_566251.1| - 0.089 12.2 0.2 0.17 11.3 0.2 1.5 1 1 0 1 1 1 0 short chain dehydrogenase Cyclase PF04199.13 gi|91773560|ref|YP_566252.1| - 7.9e-15 55.3 0.0 9.7e-15 55.0 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase HAD_2 PF13419.6 gi|91773561|ref|YP_566253.1| - 4.9e-16 59.3 2.0 6.3e-16 59.0 2.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|91773561|ref|YP_566253.1| - 9.5e-06 26.0 0.0 0.00011 22.6 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|91773561|ref|YP_566253.1| - 0.0018 18.1 5.9 0.0048 16.7 5.9 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|91773561|ref|YP_566253.1| - 0.022 15.1 0.0 0.93 9.9 0.0 2.2 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|91773561|ref|YP_566253.1| - 0.03 14.4 0.0 0.057 13.5 0.0 1.4 1 0 0 1 1 1 0 HAD-hyrolase-like Methyltransf_11 PF08241.12 gi|91773562|ref|YP_566254.1| - 6.3e-12 46.0 0.0 8.5e-08 32.8 0.0 2.4 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91773562|ref|YP_566254.1| - 5.3e-11 43.1 0.0 1.3e-06 29.0 0.0 2.4 2 0 0 2 2 2 2 Methyltransferase domain CMAS PF02353.20 gi|91773562|ref|YP_566254.1| - 1.2e-07 31.3 0.1 0.00052 19.4 0.1 2.3 2 0 0 2 2 2 2 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.6 gi|91773562|ref|YP_566254.1| - 2.1e-07 30.8 0.1 0.00043 20.1 0.1 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91773562|ref|YP_566254.1| - 5.6e-05 23.0 0.0 9.3e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91773562|ref|YP_566254.1| - 0.00012 22.7 0.0 0.017 15.8 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|91773562|ref|YP_566254.1| - 0.00022 20.6 0.1 0.0018 17.7 0.0 2.0 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Glyco_transf_11 PF01531.16 gi|91773562|ref|YP_566254.1| - 0.0045 16.2 0.1 0.0079 15.4 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 11 TehB PF03848.14 gi|91773562|ref|YP_566254.1| - 0.012 15.0 0.0 0.17 11.2 0.0 2.4 2 0 0 2 2 2 0 Tellurite resistance protein TehB Methyltransf_8 PF05148.15 gi|91773562|ref|YP_566254.1| - 0.048 13.5 0.0 0.1 12.5 0.0 1.6 1 0 0 1 1 1 0 Hypothetical methyltransferase AdoMet_MTase PF07757.13 gi|91773562|ref|YP_566254.1| - 0.081 13.3 0.0 0.081 13.3 0.0 2.1 3 0 0 3 3 3 0 Predicted AdoMet-dependent methyltransferase Radical_SAM PF04055.21 gi|91773564|ref|YP_566256.1| - 8.8e-23 81.5 0.6 2.4e-22 80.1 0.5 1.8 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|91773564|ref|YP_566256.1| - 4.9e-19 68.5 0.0 1e-18 67.5 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain Fer4_14 PF13394.6 gi|91773564|ref|YP_566256.1| - 0.013 15.6 0.6 0.24 11.6 0.1 2.8 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|91773564|ref|YP_566256.1| - 0.04 14.2 0.7 0.11 12.7 0.1 2.0 2 1 0 2 2 2 0 4Fe-4S single cluster domain GDP_Man_Dehyd PF16363.5 gi|91773565|ref|YP_566257.1| - 2e-34 119.5 0.0 2.6e-34 119.1 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|91773565|ref|YP_566257.1| - 6.2e-27 94.6 0.0 8.4e-27 94.2 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|91773565|ref|YP_566257.1| - 2.9e-11 43.1 0.0 1.9e-10 40.4 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|91773565|ref|YP_566257.1| - 9.1e-08 31.5 0.0 1.3e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|91773565|ref|YP_566257.1| - 0.00031 19.8 0.0 0.00052 19.1 0.0 1.4 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|91773565|ref|YP_566257.1| - 0.0012 18.1 0.3 0.0066 15.6 0.0 2.2 2 1 0 2 2 2 1 Male sterility protein dTDP_sugar_isom PF00908.17 gi|91773566|ref|YP_566258.1| - 1.9e-09 37.4 0.0 2.3e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase FdtA PF05523.11 gi|91773566|ref|YP_566258.1| - 0.013 15.2 0.1 0.016 14.9 0.1 1.2 1 0 0 1 1 1 0 WxcM-like, C-terminal NTP_transferase PF00483.23 gi|91773567|ref|YP_566259.1| - 4.1e-21 75.7 0.0 5.5e-21 75.3 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|91773567|ref|YP_566259.1| - 2.1e-07 31.4 0.0 3.2e-07 30.9 0.0 1.4 1 1 0 1 1 1 1 MobA-like NTP transferase domain DegT_DnrJ_EryC1 PF01041.17 gi|91773568|ref|YP_566260.1| - 2e-101 339.9 0.0 2.2e-101 339.8 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|91773568|ref|YP_566260.1| - 5.8e-13 48.5 0.0 8.8e-13 47.9 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|91773568|ref|YP_566260.1| - 3e-08 33.2 0.0 5.1e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|91773568|ref|YP_566260.1| - 0.00084 18.7 0.1 0.0019 17.6 0.1 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|91773568|ref|YP_566260.1| - 0.0022 16.6 0.1 0.0039 15.8 0.0 1.5 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme DUF2684 PF10885.8 gi|91773568|ref|YP_566260.1| - 0.034 14.3 0.0 0.08 13.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) SGL PF08450.12 gi|91773568|ref|YP_566260.1| - 0.061 12.9 0.0 0.14 11.7 0.0 1.6 2 0 0 2 2 2 0 SMP-30/Gluconolactonase/LRE-like region AMP-binding PF00501.28 gi|91773568|ref|YP_566260.1| - 0.069 11.7 0.0 0.1 11.2 0.0 1.2 1 0 0 1 1 1 0 AMP-binding enzyme Glycos_transf_2 PF00535.26 gi|91773569|ref|YP_566261.1| - 3.3e-27 95.4 0.2 5.5e-27 94.6 0.1 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|91773569|ref|YP_566261.1| - 1.7e-15 57.3 2.7 1.9e-15 57.1 2.7 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|91773569|ref|YP_566261.1| - 1.5e-07 31.6 0.0 2e-07 31.2 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|91773569|ref|YP_566261.1| - 0.00057 20.3 1.4 0.0025 18.3 0.2 2.5 2 2 0 2 2 2 1 Glycosyl transferase family 2 MamL-1 PF09596.10 gi|91773569|ref|YP_566261.1| - 0.33 11.2 1.1 2.1 8.7 1.1 2.1 1 1 0 1 1 1 0 MamL-1 domain Glycos_transf_2 PF00535.26 gi|91773570|ref|YP_566262.1| - 1.2e-22 80.6 0.1 1.8e-22 80.0 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|91773570|ref|YP_566262.1| - 2.2e-15 57.1 0.4 4e-15 56.3 0.4 1.6 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 gi|91773570|ref|YP_566262.1| - 1.3e-14 54.6 0.0 1.9e-14 54.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|91773570|ref|YP_566262.1| - 1.6e-07 31.1 0.1 2e-07 30.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|91773570|ref|YP_566262.1| - 2.2e-05 24.0 0.0 8.7e-05 22.1 0.0 1.9 1 1 1 2 2 2 1 Glycosyl transferase family 21 CofC PF01983.16 gi|91773570|ref|YP_566262.1| - 0.069 12.3 0.3 0.11 11.7 0.3 1.3 1 0 0 1 1 1 0 Guanylyl transferase CofC like DUF5591 PF17884.1 gi|91773570|ref|YP_566262.1| - 0.12 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5591) Peptidase_U57 PF05582.12 gi|91773570|ref|YP_566262.1| - 0.12 11.6 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 YabG peptidase U57 Hexapep PF00132.24 gi|91773571|ref|YP_566263.1| - 3.6e-19 67.7 24.8 2.6e-07 30.1 2.1 5.3 3 1 2 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|91773571|ref|YP_566263.1| - 5.3e-11 42.1 14.8 6.1e-05 22.7 0.3 5.3 5 0 0 5 5 5 3 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|91773571|ref|YP_566263.1| - 0.1 11.5 0.4 0.17 10.8 0.1 1.5 2 0 0 2 2 2 0 L-fucokinase DegT_DnrJ_EryC1 PF01041.17 gi|91773572|ref|YP_566264.1| - 2.5e-128 428.4 0.0 2.8e-128 428.2 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|91773572|ref|YP_566264.1| - 1.9e-09 37.2 0.1 4e-09 36.1 0.1 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|91773572|ref|YP_566264.1| - 1.3e-08 34.5 0.0 2.1e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|91773572|ref|YP_566264.1| - 1.3e-08 33.8 0.0 1.5e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|91773572|ref|YP_566264.1| - 2.6e-08 33.2 0.0 4.8e-08 32.4 0.0 1.4 2 0 0 2 2 2 1 Aminotransferase class-V SepSecS PF05889.13 gi|91773572|ref|YP_566264.1| - 0.00027 19.8 0.0 0.00032 19.5 0.0 1.1 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS OKR_DC_1 PF01276.20 gi|91773572|ref|YP_566264.1| - 0.0012 17.7 0.1 0.0021 16.9 0.1 1.3 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain PALP PF00291.25 gi|91773572|ref|YP_566264.1| - 0.0045 16.5 0.0 0.014 14.9 0.0 1.7 2 0 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme NYN PF01936.18 gi|91773572|ref|YP_566264.1| - 0.036 14.5 0.0 0.069 13.6 0.0 1.5 1 0 0 1 1 1 0 NYN domain Toxin_38 PF14866.6 gi|91773572|ref|YP_566264.1| - 0.15 12.4 0.0 1.3 9.4 0.0 2.3 2 0 0 2 2 2 0 Potassium channel toxin GFO_IDH_MocA PF01408.22 gi|91773573|ref|YP_566265.1| - 8.4e-31 107.3 0.1 2.4e-30 105.8 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold CoA_binding_2 PF13380.6 gi|91773573|ref|YP_566265.1| - 0.0016 18.9 0.0 0.0065 17.0 0.0 1.9 2 0 0 2 2 2 1 CoA binding domain UDPG_MGDP_dh_N PF03721.14 gi|91773573|ref|YP_566265.1| - 0.066 12.8 0.3 0.54 9.8 0.1 2.4 2 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F420_oxidored PF03807.17 gi|91773573|ref|YP_566265.1| - 0.086 13.4 0.0 0.72 10.5 0.0 2.5 2 1 1 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA_C PF02894.17 gi|91773573|ref|YP_566265.1| - 0.15 12.1 0.0 0.47 10.5 0.0 1.9 1 1 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain Polysacc_deac_2 PF04748.13 gi|91773573|ref|YP_566265.1| - 0.19 10.9 0.3 6.9 5.8 0.0 2.2 1 1 1 2 2 2 0 Divergent polysaccharide deacetylase NTP_transferase PF00483.23 gi|91773574|ref|YP_566266.1| - 2e-30 106.2 0.0 3e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|91773574|ref|YP_566266.1| - 3.8e-09 37.1 0.0 6.1e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glycos_transf_2 PF00535.26 gi|91773574|ref|YP_566266.1| - 9.2e-06 25.6 0.0 1.8e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 IspD PF01128.19 gi|91773574|ref|YP_566266.1| - 0.0052 16.5 0.0 0.0093 15.7 0.0 1.4 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 gi|91773574|ref|YP_566266.1| - 0.022 14.7 0.1 0.037 13.9 0.1 1.3 1 0 0 1 1 1 0 Cytidylyltransferase MannoseP_isomer PF01050.18 gi|91773575|ref|YP_566267.1| - 2.6e-57 193.0 0.6 4e-57 192.3 0.6 1.3 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase NTP_transferase PF00483.23 gi|91773575|ref|YP_566267.1| - 5.4e-44 150.6 0.0 2.6e-43 148.4 0.0 1.9 1 1 0 1 1 1 1 Nucleotidyl transferase Cupin_2 PF07883.11 gi|91773575|ref|YP_566267.1| - 6.8e-10 38.5 0.2 1.8e-09 37.2 0.2 1.8 1 1 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|91773575|ref|YP_566267.1| - 0.056 13.4 0.3 0.1 12.5 0.3 1.4 1 0 0 1 1 1 0 AraC-like ligand binding domain LPG_synthase_TM PF03706.13 gi|91773576|ref|YP_566268.1| - 2.3e-60 204.7 26.1 2.6e-60 204.5 26.1 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region TMEM132D_C PF15706.5 gi|91773576|ref|YP_566268.1| - 0.065 13.0 6.8 0.84 9.5 0.1 2.9 3 0 0 3 3 3 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Glycos_transf_2 PF00535.26 gi|91773577|ref|YP_566269.1| - 5.9e-36 123.8 0.4 9.2e-36 123.2 0.4 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 GtrA PF04138.14 gi|91773577|ref|YP_566269.1| - 2e-22 79.6 15.8 3.7e-22 78.7 15.8 1.5 1 0 0 1 1 1 1 GtrA-like protein Glyco_tranf_2_3 PF13641.6 gi|91773577|ref|YP_566269.1| - 3.9e-10 40.0 0.0 5.6e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|91773577|ref|YP_566269.1| - 0.0022 17.6 1.1 0.0026 17.3 0.1 1.6 2 1 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|91773577|ref|YP_566269.1| - 0.056 12.9 0.0 0.12 11.8 0.0 1.5 1 1 0 1 1 1 0 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|91773577|ref|YP_566269.1| - 0.094 13.2 0.0 0.21 12.1 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF166 PF02593.14 gi|91773577|ref|YP_566269.1| - 0.31 10.6 1.7 0.68 9.4 0.5 2.1 1 1 2 3 3 3 0 Domain of unknown function Methyltransf_11 PF08241.12 gi|91773578|ref|YP_566270.1| - 1.5e-17 64.0 0.0 2.6e-17 63.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91773578|ref|YP_566270.1| - 1.4e-14 54.5 0.0 3.6e-14 53.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91773578|ref|YP_566270.1| - 6.8e-10 39.0 0.0 8.6e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91773578|ref|YP_566270.1| - 1.3e-08 34.8 0.0 1.9e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91773578|ref|YP_566270.1| - 6.1e-08 33.3 0.1 3.7e-07 30.8 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|91773578|ref|YP_566270.1| - 1e-06 28.2 0.0 1.9e-06 27.4 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family CMAS PF02353.20 gi|91773578|ref|YP_566270.1| - 6.2e-05 22.4 0.0 9.1e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_8 PF05148.15 gi|91773578|ref|YP_566270.1| - 0.00082 19.3 0.0 0.0011 18.9 0.0 1.3 1 1 0 1 1 1 1 Hypothetical methyltransferase MetW PF07021.12 gi|91773578|ref|YP_566270.1| - 0.0036 16.9 0.0 0.0075 15.9 0.0 1.5 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_29 PF03141.16 gi|91773578|ref|YP_566270.1| - 0.0055 15.3 0.0 0.0061 15.2 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Bin3 PF06859.12 gi|91773578|ref|YP_566270.1| - 0.054 14.1 0.2 0.46 11.1 0.0 2.5 2 1 0 2 2 2 0 Bicoid-interacting protein 3 (Bin3) Methyltransf_2 PF00891.18 gi|91773578|ref|YP_566270.1| - 0.1 11.9 0.0 5.8 6.2 0.0 2.1 2 0 0 2 2 2 0 O-methyltransferase domain PMT_2 PF13231.6 gi|91773579|ref|YP_566271.1| - 2.8e-25 89.4 15.3 2.8e-25 89.4 15.3 2.9 3 0 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF2723 PF11028.8 gi|91773579|ref|YP_566271.1| - 0.0016 18.4 9.1 0.0016 18.4 9.1 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2723) UPF0139 PF03669.13 gi|91773579|ref|YP_566271.1| - 0.025 14.5 0.1 0.14 12.0 0.0 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) Sigma_reg_N PF13800.6 gi|91773579|ref|YP_566271.1| - 0.37 11.1 0.1 0.37 11.1 0.1 4.4 4 1 1 5 5 5 0 Sigma factor regulator N-terminal Pox_A14 PF05767.12 gi|91773579|ref|YP_566271.1| - 0.5 10.5 11.4 10 6.4 0.0 3.7 3 0 0 3 3 3 0 Poxvirus virion envelope protein A14 MerC PF03203.14 gi|91773579|ref|YP_566271.1| - 5.9 7.4 16.9 0.69 10.4 4.6 3.0 3 1 0 3 3 3 0 MerC mercury resistance protein Phage_holin_3_6 PF07332.11 gi|91773580|ref|YP_566272.1| - 0.15 12.1 4.0 0.23 11.5 4.0 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3810 PF12725.7 gi|91773580|ref|YP_566272.1| - 2 7.7 4.9 2.8 7.2 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) 60KD_IMP PF02096.20 gi|91773580|ref|YP_566272.1| - 5.5 6.9 7.7 2.8 7.8 1.0 2.0 1 1 1 2 2 2 0 60Kd inner membrane protein Peptidase_M24 PF00557.24 gi|91773581|ref|YP_566273.1| - 4.9e-49 166.8 1.1 7.3e-49 166.3 1.1 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 ATP-cone PF03477.16 gi|91773581|ref|YP_566273.1| - 0.076 13.6 3.3 0.13 12.9 1.4 2.2 2 0 0 2 2 2 0 ATP cone domain Peptidase_M24 PF00557.24 gi|91773582|ref|YP_566274.1| - 1.8e-39 135.6 0.1 2.1e-39 135.4 0.1 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF1805 PF08827.11 gi|91773584|ref|YP_566276.1| - 1.9e-25 88.9 0.4 3.3e-25 88.2 0.4 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1805) IMS PF00817.20 gi|91773584|ref|YP_566276.1| - 0.037 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family UPF0020 PF01170.18 gi|91773585|ref|YP_566277.1| - 1.1e-26 93.7 0.0 1.3e-25 90.3 0.0 2.2 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|91773585|ref|YP_566277.1| - 4.4e-13 49.6 2.8 4.6e-13 49.5 1.3 1.7 2 0 0 2 2 2 1 THUMP domain N6_N4_Mtase PF01555.18 gi|91773585|ref|YP_566277.1| - 1.6e-07 31.3 0.0 0.0025 17.6 0.0 2.2 2 0 0 2 2 2 2 DNA methylase N6_Mtase PF02384.16 gi|91773585|ref|YP_566277.1| - 3.1e-06 26.7 0.0 4.9e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_11 PF08241.12 gi|91773585|ref|YP_566277.1| - 3.2e-06 27.7 0.1 1.4e-05 25.7 0.0 2.2 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91773585|ref|YP_566277.1| - 8.4e-05 23.2 0.0 0.00049 20.8 0.0 2.3 2 1 0 2 2 2 1 Methyltransferase domain AviRa PF11599.8 gi|91773585|ref|YP_566277.1| - 0.0016 18.0 0.0 0.11 12.0 0.0 2.2 1 1 1 2 2 2 1 RRNA methyltransferase AviRa Cons_hypoth95 PF03602.15 gi|91773585|ref|YP_566277.1| - 0.0022 17.7 0.0 0.0032 17.1 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 N6-adenineMlase PF10237.9 gi|91773585|ref|YP_566277.1| - 0.0082 16.0 0.0 0.015 15.1 0.0 1.4 1 0 0 1 1 1 1 Probable N6-adenine methyltransferase Methyltransf_15 PF09445.10 gi|91773585|ref|YP_566277.1| - 0.13 11.8 0.0 0.98 9.0 0.0 2.1 2 1 0 2 2 2 0 RNA cap guanine-N2 methyltransferase DUF45 PF01863.17 gi|91773586|ref|YP_566278.1| - 8.2e-33 114.2 2.9 1.9e-31 109.8 2.2 2.0 1 1 1 2 2 2 1 Protein of unknown function DUF45 DUF4037 PF13228.6 gi|91773586|ref|YP_566278.1| - 0.00034 21.4 0.0 0.0006 20.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4037) SprT-like PF10263.9 gi|91773586|ref|YP_566278.1| - 0.0011 18.8 1.3 0.0021 17.9 0.3 1.8 1 1 1 2 2 2 1 SprT-like family Reprolysin_3 PF13582.6 gi|91773586|ref|YP_566278.1| - 0.056 14.0 0.1 0.11 13.0 0.1 1.5 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M10 PF00413.24 gi|91773586|ref|YP_566278.1| - 0.065 13.1 0.1 0.15 11.9 0.0 1.3 1 1 0 1 1 1 0 Matrixin Peptidase_M57 PF12388.8 gi|91773586|ref|YP_566278.1| - 0.23 11.1 0.0 0.37 10.4 0.0 1.3 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase PseudoU_synth_1 PF01416.20 gi|91773587|ref|YP_566279.1| - 4.8e-29 101.0 0.0 4.6e-23 81.7 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase DUF1297 PF06973.12 gi|91773588|ref|YP_566280.1| - 6.9e-54 182.2 0.0 9.5e-54 181.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|91773588|ref|YP_566280.1| - 1.5e-44 150.9 0.0 3e-44 149.9 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_3 PF02655.14 gi|91773588|ref|YP_566280.1| - 0.00018 21.6 0.0 0.00038 20.5 0.0 1.5 1 1 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 gi|91773588|ref|YP_566280.1| - 0.0011 18.6 0.0 0.0025 17.5 0.0 1.5 1 0 0 1 1 1 1 RimK-like ATP-grasp domain CPSase_L_D2 PF02786.17 gi|91773588|ref|YP_566280.1| - 0.0082 15.7 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain DASH_Duo1 PF08651.10 gi|91773589|ref|YP_566281.1| - 0.026 14.3 0.8 0.79 9.5 0.0 2.4 2 0 0 2 2 2 0 DASH complex subunit Duo1 PHO4 PF01384.20 gi|91773590|ref|YP_566282.1| - 5.6 5.9 8.9 1 8.3 1.3 2.0 1 1 1 2 2 2 0 Phosphate transporter family Peptidase_M29 PF02073.15 gi|91773591|ref|YP_566283.1| - 1.6e-11 43.7 0.1 2.8e-07 29.7 0.1 2.1 1 1 0 2 2 2 2 Thermophilic metalloprotease (M29) Aconitase_C PF00694.19 gi|91773592|ref|YP_566284.1| - 9.4e-18 64.8 0.0 1.3e-17 64.4 0.0 1.2 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|91773592|ref|YP_566284.1| - 0.0064 16.1 0.2 0.092 12.4 0.2 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Iso_dh PF00180.20 gi|91773593|ref|YP_566285.1| - 6.2e-91 305.1 0.0 7.3e-91 304.9 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase AAA_15 PF13175.6 gi|91773594|ref|YP_566286.1| - 8.5e-10 38.9 0.2 8.8e-10 38.8 0.2 1.0 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|91773594|ref|YP_566286.1| - 8.6e-06 25.8 0.0 9.9e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|91773594|ref|YP_566286.1| - 7.3e-05 23.4 0.6 8.2e-05 23.2 0.6 1.3 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|91773594|ref|YP_566286.1| - 0.00018 21.0 0.0 0.00018 21.0 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 gi|91773594|ref|YP_566286.1| - 0.00033 21.2 0.0 0.00033 21.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter NACHT PF05729.12 gi|91773594|ref|YP_566286.1| - 0.0005 20.0 0.0 0.00056 19.9 0.0 1.1 1 0 0 1 1 1 1 NACHT domain ATPase_2 PF01637.18 gi|91773594|ref|YP_566286.1| - 0.00057 19.9 0.1 0.0008 19.4 0.0 1.3 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_29 PF13555.6 gi|91773594|ref|YP_566286.1| - 0.00088 19.0 0.0 0.0012 18.6 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|91773594|ref|YP_566286.1| - 0.0017 18.8 0.0 0.0017 18.8 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|91773594|ref|YP_566286.1| - 0.0046 17.2 0.0 0.0053 17.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_27 PF13514.6 gi|91773594|ref|YP_566286.1| - 0.006 16.2 0.0 0.006 16.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|91773594|ref|YP_566286.1| - 0.01 16.3 0.0 0.011 16.1 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|91773594|ref|YP_566286.1| - 0.02 14.8 0.0 0.025 14.5 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA_7 PF12775.7 gi|91773594|ref|YP_566286.1| - 0.022 14.3 0.0 0.026 14.1 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region NB-ARC PF00931.22 gi|91773594|ref|YP_566286.1| - 0.029 13.6 0.0 0.029 13.6 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.6 gi|91773594|ref|YP_566286.1| - 0.048 13.7 0.0 0.057 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|91773594|ref|YP_566286.1| - 0.06 12.7 0.0 0.071 12.5 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|91773594|ref|YP_566286.1| - 0.099 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) MukB PF04310.12 gi|91773594|ref|YP_566286.1| - 0.1 12.4 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 MukB N-terminal AAA_30 PF13604.6 gi|91773594|ref|YP_566286.1| - 0.1 12.3 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 gi|91773594|ref|YP_566286.1| - 0.16 11.7 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain Fic PF02661.18 gi|91773595|ref|YP_566287.1| - 1.7e-24 86.6 0.0 3.7e-24 85.4 0.0 1.6 1 0 0 1 1 1 1 Fic/DOC family DUF4852 PF16144.5 gi|91773595|ref|YP_566287.1| - 0.066 13.3 0.1 0.27 11.4 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4852) HxlR PF01638.17 gi|91773596|ref|YP_566288.1| - 1.3e-06 28.1 0.1 1.5e-06 28.0 0.1 1.0 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|91773596|ref|YP_566288.1| - 0.00017 21.5 0.1 0.0002 21.3 0.1 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_24 PF13412.6 gi|91773596|ref|YP_566288.1| - 0.0038 16.8 0.0 0.0064 16.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|91773596|ref|YP_566288.1| - 0.048 13.7 0.0 0.079 13.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DSPn PF14671.6 gi|91773597|ref|YP_566289.1| - 0.098 13.1 0.1 0.12 12.8 0.1 1.1 1 0 0 1 1 1 0 Dual specificity protein phosphatase, N-terminal half DUF772 PF05598.11 gi|91773598|ref|YP_566290.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91773598|ref|YP_566290.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91773598|ref|YP_566290.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91773598|ref|YP_566290.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91773598|ref|YP_566290.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease UPF0489 PF12640.7 gi|91773599|ref|YP_566291.1| - 1.1e-27 97.4 3.2 1.6e-27 96.9 3.2 1.2 1 0 0 1 1 1 1 UPF0489 domain HxlR PF01638.17 gi|91773600|ref|YP_566292.1| - 2.8e-06 27.1 0.1 4.2e-06 26.5 0.0 1.3 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|91773600|ref|YP_566292.1| - 0.00085 19.3 0.0 0.0011 18.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_20 PF12840.7 gi|91773600|ref|YP_566292.1| - 0.0011 19.0 0.0 0.0016 18.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|91773600|ref|YP_566292.1| - 0.11 12.0 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding NosD PF05048.13 gi|91773601|ref|YP_566293.1| - 1.5e-72 243.8 166.7 1.4e-38 132.6 52.4 6.9 3 2 3 6 6 6 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|91773601|ref|YP_566293.1| - 5.4e-55 185.6 176.7 4e-20 72.3 45.6 7.2 3 2 5 8 8 8 4 Right handed beta helix region S-layer PF07752.11 gi|91773601|ref|YP_566293.1| - 6.6e-10 38.5 0.3 2.2e-09 36.7 0.0 2.1 2 0 0 2 2 2 1 S-layer protein BiPBP_C PF06832.12 gi|91773601|ref|YP_566293.1| - 6.7e-07 29.3 0.0 1.6 8.9 0.0 5.1 5 0 0 5 5 5 2 Penicillin-Binding Protein C-terminus Family SepZ PF06066.11 gi|91773601|ref|YP_566293.1| - 2.4 8.4 7.8 0.18 12.1 1.0 2.7 3 0 0 3 3 3 0 SepZ PKD PF00801.20 gi|91773601|ref|YP_566293.1| - 2.7 7.9 28.0 1.2 9.0 2.3 5.1 4 0 0 4 4 4 0 PKD domain Phage_Coat_B PF05356.11 gi|91773602|ref|YP_566294.1| - 0.042 13.8 0.0 0.12 12.3 0.0 1.8 1 0 0 1 1 1 0 Phage Coat protein B DUF4366 PF14283.6 gi|91773602|ref|YP_566294.1| - 0.078 13.0 0.5 0.17 12.0 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4366) AAA_15 PF13175.6 gi|91773603|ref|YP_566295.1| - 4.5e-19 69.4 13.1 8.9e-19 68.4 13.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|91773603|ref|YP_566295.1| - 3.5e-15 56.6 6.7 3.3e-09 37.0 2.1 2.5 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 gi|91773603|ref|YP_566295.1| - 1.1e-08 35.6 0.1 0.0047 17.5 0.0 2.6 2 1 0 2 2 2 2 ABC transporter AAA_23 PF13476.6 gi|91773603|ref|YP_566295.1| - 0.00012 22.7 4.0 0.00036 21.1 3.6 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|91773603|ref|YP_566295.1| - 0.00029 20.3 0.1 0.0027 17.2 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|91773603|ref|YP_566295.1| - 0.0027 18.1 0.1 0.012 16.0 0.0 2.2 3 0 0 3 3 3 1 AAA ATPase domain NACHT PF05729.12 gi|91773603|ref|YP_566295.1| - 0.0027 17.6 0.0 0.0068 16.3 0.0 1.7 1 0 0 1 1 1 1 NACHT domain ATPase_2 PF01637.18 gi|91773603|ref|YP_566295.1| - 0.0038 17.2 0.7 0.0038 17.2 0.7 2.1 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea HNH_4 PF13395.6 gi|91773603|ref|YP_566295.1| - 0.0091 15.9 0.1 0.025 14.5 0.1 1.7 1 0 0 1 1 1 1 HNH endonuclease AAA_29 PF13555.6 gi|91773603|ref|YP_566295.1| - 0.013 15.2 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|91773603|ref|YP_566295.1| - 0.014 15.7 0.3 0.042 14.1 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA PF00004.29 gi|91773603|ref|YP_566295.1| - 0.018 15.5 0.0 0.12 12.9 0.0 2.5 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|91773603|ref|YP_566295.1| - 0.078 12.5 0.0 0.36 10.3 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_27 PF13514.6 gi|91773603|ref|YP_566295.1| - 0.081 12.5 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF4435 PF14491.6 gi|91773604|ref|YP_566296.1| - 2.9e-42 145.2 0.1 3.9e-42 144.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4435) NRD1_2 PF01995.16 gi|91773605|ref|YP_566297.1| - 4.4e-92 307.7 0.6 5.8e-92 307.3 0.6 1.2 1 0 0 1 1 1 1 NrpR regulatory domains NRD1 and 2 HTH_12 PF08461.10 gi|91773605|ref|YP_566297.1| - 1.7e-29 101.5 0.5 3.7e-29 100.5 0.5 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain Ribosomal_S19e PF01090.19 gi|91773605|ref|YP_566297.1| - 0.21 11.3 0.0 0.47 10.2 0.0 1.5 2 0 0 2 2 2 0 Ribosomal protein S19e ABC1 PF03109.16 gi|91773606|ref|YP_566298.1| - 3.8e-37 127.1 0.1 8e-37 126.0 0.1 1.6 1 0 0 1 1 1 1 ABC1 family Pkinase PF00069.25 gi|91773606|ref|YP_566298.1| - 3.1e-07 30.0 0.1 6.2e-07 29.0 0.1 1.4 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|91773606|ref|YP_566298.1| - 8.5e-05 22.6 0.1 0.00075 19.5 0.1 2.1 2 0 0 2 2 2 1 Phosphotransferase enzyme family SWIRM-assoc_3 PF16498.5 gi|91773606|ref|YP_566298.1| - 0.016 15.5 0.0 0.037 14.3 0.0 1.6 1 0 0 1 1 1 0 SWIRM-associated domain at the C-terminal Pkinase_Tyr PF07714.17 gi|91773606|ref|YP_566298.1| - 0.043 13.1 0.2 0.12 11.6 0.0 1.9 3 0 0 3 3 3 0 Protein tyrosine kinase Phasin PF05597.11 gi|91773607|ref|YP_566299.1| - 1.4e-10 41.3 5.3 3.5e-08 33.5 5.3 2.1 1 1 0 1 1 1 1 Poly(hydroxyalcanoate) granule associated protein (phasin) BMFP PF04380.13 gi|91773607|ref|YP_566299.1| - 4.4e-05 23.9 2.9 4.4e-05 23.9 2.9 1.9 2 1 0 2 2 2 1 Membrane fusogenic activity PHA_synth_III_E PF09712.10 gi|91773607|ref|YP_566299.1| - 0.0019 17.4 0.1 0.0032 16.6 0.1 1.3 1 1 0 1 1 1 1 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) Sun2_CC2 PF18580.1 gi|91773607|ref|YP_566299.1| - 0.01 16.1 0.7 3.6 7.9 0.0 2.5 2 1 0 2 2 2 0 SUN2 coiled coil domain 2 ECH_2 PF16113.5 gi|91773607|ref|YP_566299.1| - 0.016 14.8 0.4 0.018 14.5 0.4 1.0 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase DUF4094 PF13334.6 gi|91773607|ref|YP_566299.1| - 0.13 12.7 0.4 0.17 12.3 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) TSC22 PF01166.18 gi|91773607|ref|YP_566299.1| - 0.36 11.2 0.4 0.36 11.2 0.4 2.9 2 1 1 3 3 3 0 TSC-22/dip/bun family DUF883 PF05957.13 gi|91773607|ref|YP_566299.1| - 0.5 11.0 2.8 0.79 10.4 0.6 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) PRESAN PF09687.10 gi|91773607|ref|YP_566299.1| - 1 9.9 7.0 19 5.8 7.0 2.1 1 1 0 1 1 1 0 Plasmodium RESA N-terminal DUF2680 PF10925.8 gi|91773607|ref|YP_566299.1| - 1.2 9.2 8.2 2.4 8.2 2.7 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2680) OrfB_IS605 PF01385.19 gi|91773608|ref|YP_566300.1| - 3e-26 92.0 1.0 8.3e-26 90.6 1.0 1.7 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|91773608|ref|YP_566300.1| - 2.8e-19 68.8 0.8 7e-19 67.5 0.8 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|91773608|ref|YP_566300.1| - 1e-18 66.5 1.0 2.3e-18 65.4 1.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain zf-piccolo PF05715.13 gi|91773608|ref|YP_566300.1| - 0.004 17.3 4.0 0.0099 16.0 4.0 1.6 1 0 0 1 1 1 1 Piccolo Zn-finger ABC_tran PF00005.27 gi|91773609|ref|YP_566301.1| - 4.6e-50 169.7 0.0 4.4e-24 85.6 0.0 2.6 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|91773609|ref|YP_566301.1| - 6.9e-10 39.2 6.8 0.0073 16.2 1.2 4.2 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|91773609|ref|YP_566301.1| - 3.3e-07 30.4 0.2 0.0073 16.2 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase SbcCD_C PF13558.6 gi|91773609|ref|YP_566301.1| - 5.5e-06 26.5 1.4 0.023 14.9 0.1 4.1 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|91773609|ref|YP_566301.1| - 1.2e-05 25.0 5.7 0.018 14.8 1.1 2.7 2 1 1 3 3 3 2 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|91773609|ref|YP_566301.1| - 0.00011 22.5 3.2 0.31 11.3 0.1 3.8 4 0 0 4 4 3 1 AAA domain AAA_30 PF13604.6 gi|91773609|ref|YP_566301.1| - 0.0002 21.1 0.2 0.33 10.6 0.1 2.4 2 0 0 2 2 2 2 AAA domain PRK PF00485.18 gi|91773609|ref|YP_566301.1| - 0.00023 21.0 0.7 0.39 10.4 0.3 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.6 gi|91773609|ref|YP_566301.1| - 0.00028 21.3 0.1 0.31 11.4 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain MobB PF03205.14 gi|91773609|ref|YP_566301.1| - 0.00035 20.5 1.7 0.27 11.1 0.6 2.4 2 0 0 2 2 2 2 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 gi|91773609|ref|YP_566301.1| - 0.00055 19.7 0.8 1.1 8.9 0.2 2.5 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|91773609|ref|YP_566301.1| - 0.00056 20.5 0.4 0.075 13.6 0.2 2.8 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|91773609|ref|YP_566301.1| - 0.00071 19.5 1.6 1 9.2 0.9 2.6 2 0 0 2 2 2 2 NACHT domain AAA_28 PF13521.6 gi|91773609|ref|YP_566301.1| - 0.00081 19.7 0.0 0.44 10.8 0.0 2.7 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|91773609|ref|YP_566301.1| - 0.00094 19.4 0.5 0.84 9.8 0.1 2.7 3 0 0 3 3 2 1 AAA domain AAA_15 PF13175.6 gi|91773609|ref|YP_566301.1| - 0.0012 18.6 1.0 0.14 11.8 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain ATPase_2 PF01637.18 gi|91773609|ref|YP_566301.1| - 0.0012 18.8 0.6 2.9 7.8 0.0 3.2 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea TniB PF05621.11 gi|91773609|ref|YP_566301.1| - 0.0018 17.7 1.4 0.091 12.2 0.0 3.4 4 0 0 4 4 4 1 Bacterial TniB protein TsaE PF02367.17 gi|91773609|ref|YP_566301.1| - 0.0031 17.5 0.3 1.1 9.3 0.0 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 gi|91773609|ref|YP_566301.1| - 0.0039 17.1 0.0 1.1 9.1 0.0 2.5 2 0 0 2 2 2 1 Rad17 P-loop domain NB-ARC PF00931.22 gi|91773609|ref|YP_566301.1| - 0.0049 16.1 1.0 0.84 8.8 0.2 2.4 2 0 0 2 2 2 1 NB-ARC domain PduV-EutP PF10662.9 gi|91773609|ref|YP_566301.1| - 0.0052 16.5 0.6 3.1 7.5 0.1 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation cobW PF02492.19 gi|91773609|ref|YP_566301.1| - 0.0055 16.3 1.3 0.37 10.3 0.1 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Pox_A32 PF04665.12 gi|91773609|ref|YP_566301.1| - 0.0089 15.5 2.1 2.8 7.3 0.1 2.6 2 0 0 2 2 2 2 Poxvirus A32 protein AAA_25 PF13481.6 gi|91773609|ref|YP_566301.1| - 0.009 15.6 1.5 7.8 6.0 0.0 3.5 4 0 0 4 4 4 0 AAA domain PhoH PF02562.16 gi|91773609|ref|YP_566301.1| - 0.0099 15.3 0.8 1.7 8.0 0.0 2.7 3 0 0 3 3 2 1 PhoH-like protein AAA PF00004.29 gi|91773609|ref|YP_566301.1| - 0.01 16.3 0.3 17 5.9 0.1 4.0 4 2 1 5 5 3 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|91773609|ref|YP_566301.1| - 0.012 16.1 8.8 0.058 13.9 0.9 2.5 2 1 0 2 2 2 0 AAA domain G-alpha PF00503.20 gi|91773609|ref|YP_566301.1| - 0.017 14.3 0.3 1.2 8.2 0.0 2.2 2 0 0 2 2 2 0 G-protein alpha subunit dNK PF01712.19 gi|91773609|ref|YP_566301.1| - 0.025 14.4 0.5 3.3 7.5 0.2 2.4 2 0 0 2 2 2 0 Deoxynucleoside kinase DLIC PF05783.11 gi|91773609|ref|YP_566301.1| - 0.028 13.3 1.2 3.7 6.3 0.1 2.2 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) NTPase_1 PF03266.15 gi|91773609|ref|YP_566301.1| - 0.031 14.2 1.3 0.57 10.1 0.1 2.5 2 0 0 2 2 2 0 NTPase APS_kinase PF01583.20 gi|91773609|ref|YP_566301.1| - 0.041 13.8 0.1 9.8 6.1 0.0 2.4 2 0 0 2 2 2 0 Adenylylsulphate kinase T2SSE PF00437.20 gi|91773609|ref|YP_566301.1| - 0.056 12.5 0.1 2.3 7.2 0.0 2.3 2 0 0 2 2 2 0 Type II/IV secretion system protein Zeta_toxin PF06414.12 gi|91773609|ref|YP_566301.1| - 0.066 12.5 0.1 4.8 6.4 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin AAA_19 PF13245.6 gi|91773609|ref|YP_566301.1| - 0.087 13.2 0.1 22 5.4 0.1 2.5 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|91773609|ref|YP_566301.1| - 0.1 12.3 0.1 23 4.7 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein VirE PF05272.11 gi|91773609|ref|YP_566301.1| - 0.11 12.2 0.0 7.4 6.2 0.0 2.2 2 0 0 2 2 2 0 Virulence-associated protein E MMR_HSR1 PF01926.23 gi|91773609|ref|YP_566301.1| - 0.18 11.9 1.6 11 6.2 0.2 2.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase KAP_NTPase PF07693.14 gi|91773609|ref|YP_566301.1| - 0.19 11.0 1.2 0.51 9.5 0.1 2.0 2 0 0 2 2 2 0 KAP family P-loop domain RNA_helicase PF00910.22 gi|91773609|ref|YP_566301.1| - 0.19 12.1 0.6 25 5.3 0.0 2.4 2 0 0 2 2 2 0 RNA helicase Roc PF08477.13 gi|91773609|ref|YP_566301.1| - 0.22 11.7 0.2 22 5.3 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ATPase PF06745.13 gi|91773609|ref|YP_566301.1| - 0.23 10.8 1.0 9 5.6 0.1 2.5 2 0 0 2 2 2 0 KaiC CbiA PF01656.23 gi|91773609|ref|YP_566301.1| - 9.8 6.3 6.5 15 5.6 1.1 3.0 3 0 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain PcrB PF01884.17 gi|91773610|ref|YP_566302.1| - 1.4e-65 220.9 1.4 1.7e-65 220.7 1.4 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|91773610|ref|YP_566302.1| - 5.5e-05 22.7 0.5 0.00023 20.7 0.1 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein Ribul_P_3_epim PF00834.19 gi|91773610|ref|YP_566302.1| - 0.13 11.7 0.5 0.23 10.8 0.5 1.4 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family Ribosomal_L40e PF01020.17 gi|91773611|ref|YP_566303.1| - 8.9e-08 31.9 6.5 1e-07 31.8 6.5 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DZR PF12773.7 gi|91773611|ref|YP_566303.1| - 0.0035 17.3 0.7 0.0038 17.2 0.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|91773611|ref|YP_566303.1| - 0.013 15.2 1.4 0.021 14.5 1.4 1.4 1 0 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|91773611|ref|YP_566303.1| - 0.014 15.0 6.1 0.014 15.0 6.1 1.8 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-RanBP PF00641.18 gi|91773611|ref|YP_566303.1| - 0.13 11.6 5.2 0.11 11.8 3.9 1.5 1 1 0 1 1 1 0 Zn-finger in Ran binding protein and others zinc_ribbon_13 PF09855.9 gi|91773611|ref|YP_566303.1| - 0.33 11.2 3.6 0.71 10.1 0.2 2.1 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) DUF35_N PF12172.8 gi|91773611|ref|YP_566303.1| - 1.8 8.5 6.1 0.31 11.0 1.4 1.9 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) GatB_N PF02934.15 gi|91773612|ref|YP_566304.1| - 2.8e-104 348.3 0.0 4.1e-104 347.8 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|91773612|ref|YP_566304.1| - 1.2e-40 138.7 0.4 2.1e-40 138.0 0.4 1.4 1 0 0 1 1 1 1 GatB domain zf-Di19 PF05605.12 gi|91773612|ref|YP_566304.1| - 0.046 14.0 0.2 0.093 13.0 0.2 1.4 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Amidase PF01425.21 gi|91773613|ref|YP_566305.1| - 1.1e-155 519.0 0.1 1.3e-155 518.8 0.1 1.0 1 0 0 1 1 1 1 Amidase Glu-tRNAGln PF02686.15 gi|91773614|ref|YP_566306.1| - 1e-19 70.6 0.2 1.4e-19 70.1 0.2 1.2 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Putative_PNPOx PF01243.20 gi|91773615|ref|YP_566307.1| - 3.7e-17 62.3 0.0 4.5e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HTH_20 PF12840.7 gi|91773616|ref|YP_566308.1| - 4.5e-09 36.2 0.1 8.9e-09 35.3 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|91773616|ref|YP_566308.1| - 1.4e-06 28.0 0.2 3.2e-06 26.9 0.1 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|91773616|ref|YP_566308.1| - 0.00092 19.1 0.0 0.0017 18.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.6 gi|91773616|ref|YP_566308.1| - 0.0023 18.1 0.1 0.0048 17.0 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|91773616|ref|YP_566308.1| - 0.024 14.2 0.2 0.069 12.7 0.1 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding CtsR_C PF17727.1 gi|91773616|ref|YP_566308.1| - 0.03 14.4 0.5 0.72 10.0 0.0 2.7 2 1 0 2 2 2 0 CtsR C-terminal dimerization domain Rio2_N PF09202.11 gi|91773616|ref|YP_566308.1| - 0.035 14.3 0.0 0.082 13.1 0.0 1.6 1 0 0 1 1 1 0 Rio2, N-terminal BLACT_WH PF17778.1 gi|91773616|ref|YP_566308.1| - 0.035 14.1 0.1 0.18 11.8 0.0 2.0 2 0 0 2 2 2 0 Beta-lactamase associated winged helix domain HTH_IclR PF09339.10 gi|91773616|ref|YP_566308.1| - 0.12 12.2 0.2 0.35 10.7 0.1 1.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain EamA PF00892.20 gi|91773617|ref|YP_566309.1| - 3.6e-18 66.0 39.6 3.2e-12 46.8 15.8 2.1 2 0 0 2 2 2 2 EamA-like transporter family SLC35F PF06027.12 gi|91773617|ref|YP_566309.1| - 0.00039 20.0 0.8 0.00087 18.9 0.8 1.6 1 0 0 1 1 1 1 Solute carrier family 35 TPT PF03151.16 gi|91773617|ref|YP_566309.1| - 0.19 11.0 8.5 0.044 13.1 4.6 1.9 2 0 0 2 2 2 0 Triose-phosphate Transporter family TssN PF17555.2 gi|91773617|ref|YP_566309.1| - 0.37 10.2 4.6 2 7.7 0.9 2.3 1 1 0 2 2 2 0 Type VI secretion system, TssN TMEM234 PF10639.9 gi|91773617|ref|YP_566309.1| - 0.38 10.8 7.6 0.52 10.3 0.7 2.7 2 1 0 2 2 2 0 Putative transmembrane family 234 Prismane PF03063.20 gi|91773618|ref|YP_566310.1| - 1.7e-178 594.5 0.1 2e-178 594.3 0.1 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family DUF2371 PF10177.9 gi|91773619|ref|YP_566311.1| - 0.16 12.1 3.0 1.2 9.3 3.0 2.0 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) Radical_SAM PF04055.21 gi|91773620|ref|YP_566312.1| - 2.5e-13 50.8 1.2 3.2e-13 50.4 0.4 1.6 2 0 0 2 2 2 1 Radical SAM superfamily TssR PF17643.1 gi|91773620|ref|YP_566312.1| - 0.0016 16.5 0.0 0.0022 16.0 0.0 1.1 1 0 0 1 1 1 1 Type VI secretion system, TssR Thioredoxin PF00085.20 gi|91773622|ref|YP_566314.1| - 2.2e-29 101.5 0.1 2.7e-29 101.2 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|91773622|ref|YP_566314.1| - 1.1e-06 28.9 0.0 0.0024 18.2 0.0 2.4 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|91773622|ref|YP_566314.1| - 1.1e-06 29.0 0.3 4.3e-05 23.9 0.3 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 gi|91773622|ref|YP_566314.1| - 2.4e-06 27.1 0.0 3.2e-06 26.7 0.0 1.3 1 1 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_9 PF14595.6 gi|91773622|ref|YP_566314.1| - 3.6e-05 23.6 0.2 6.5e-05 22.7 0.1 1.4 1 1 0 1 1 1 1 Thioredoxin Thioredoxin_6 PF13848.6 gi|91773622|ref|YP_566314.1| - 0.00029 20.8 0.1 0.00036 20.5 0.1 1.3 1 1 0 1 1 1 1 Thioredoxin-like domain AhpC-TSA PF00578.21 gi|91773622|ref|YP_566314.1| - 0.0031 17.4 0.1 0.039 13.9 0.0 2.1 1 1 1 2 2 2 1 AhpC/TSA family Redoxin PF08534.10 gi|91773622|ref|YP_566314.1| - 0.012 15.3 0.1 0.032 13.9 0.1 1.8 1 1 0 1 1 1 0 Redoxin TraF PF13728.6 gi|91773622|ref|YP_566314.1| - 0.013 15.3 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 F plasmid transfer operon protein HyaE PF07449.11 gi|91773622|ref|YP_566314.1| - 0.03 14.3 0.0 0.065 13.2 0.0 1.5 2 0 0 2 2 2 0 Hydrogenase-1 expression protein HyaE Thioredoxin_5 PF13743.6 gi|91773622|ref|YP_566314.1| - 0.042 13.5 0.1 0.081 12.6 0.0 1.5 1 1 0 1 1 1 0 Thioredoxin DUF2114 PF09887.9 gi|91773623|ref|YP_566315.1| - 3.4e-233 774.1 3.5 3.8e-233 773.9 3.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) DUF166 PF02593.14 gi|91773624|ref|YP_566316.1| - 8.5e-66 221.6 0.0 9.6e-66 221.5 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DapB_N PF01113.20 gi|91773624|ref|YP_566316.1| - 0.0086 16.2 0.0 0.019 15.1 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Thymidylate_kin PF02223.17 gi|91773625|ref|YP_566317.1| - 1.7e-41 141.9 0.0 2e-41 141.7 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 gi|91773625|ref|YP_566317.1| - 4.5e-06 26.7 0.0 7.4e-06 26.0 0.0 1.3 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_18 PF13238.6 gi|91773625|ref|YP_566317.1| - 0.00039 21.0 0.0 0.001 19.6 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|91773625|ref|YP_566317.1| - 0.00069 19.8 0.0 0.002 18.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|91773625|ref|YP_566317.1| - 0.0032 17.7 0.0 0.0048 17.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain CKS PF01111.19 gi|91773625|ref|YP_566317.1| - 0.018 15.3 0.0 0.033 14.5 0.0 1.4 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit AAA_24 PF13479.6 gi|91773625|ref|YP_566317.1| - 0.064 13.0 0.3 5.3 6.7 0.1 2.4 2 1 0 2 2 2 0 AAA domain KorB PF08535.10 gi|91773625|ref|YP_566317.1| - 0.097 12.7 0.0 2 8.5 0.0 2.6 3 0 0 3 3 3 0 KorB domain His_biosynth PF00977.21 gi|91773627|ref|YP_566319.1| - 1.4e-27 96.7 0.0 1.7e-27 96.4 0.0 1.1 1 0 0 1 1 1 1 Histidine biosynthesis protein 4HFCP_synth PF04476.13 gi|91773628|ref|YP_566320.1| - 4.2e-86 288.4 0.0 4.7e-86 288.2 0.0 1.0 1 0 0 1 1 1 1 4-HFC-P synthase QRPTase_C PF01729.19 gi|91773628|ref|YP_566320.1| - 0.00085 19.1 0.0 0.041 13.6 0.0 2.4 2 1 0 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain EAL PF00563.20 gi|91773628|ref|YP_566320.1| - 0.097 12.2 0.0 1.3 8.5 0.0 2.0 2 0 0 2 2 2 0 EAL domain AAA PF00004.29 gi|91773629|ref|YP_566321.1| - 1.6e-97 323.0 0.0 2.2e-48 164.0 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|91773629|ref|YP_566321.1| - 1.1e-32 111.6 0.5 4.7e-16 58.3 0.1 2.7 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|91773629|ref|YP_566321.1| - 2.4e-26 91.7 0.5 7.1e-25 87.0 0.7 2.9 3 0 0 3 3 2 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.12 gi|91773629|ref|YP_566321.1| - 1.5e-14 54.1 0.0 6e-07 29.3 0.0 3.0 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|91773629|ref|YP_566321.1| - 1.6e-14 54.4 0.0 1.7e-06 28.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|91773629|ref|YP_566321.1| - 3.2e-14 53.7 0.1 0.00023 21.6 0.0 4.3 2 2 1 3 3 3 2 AAA ATPase domain CDC48_2 PF02933.17 gi|91773629|ref|YP_566321.1| - 1.5e-13 50.3 0.3 3.9e-13 49.0 0.3 1.7 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 TIP49 PF06068.13 gi|91773629|ref|YP_566321.1| - 4.4e-11 42.6 0.0 8.3e-05 21.9 0.0 2.6 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_22 PF13401.6 gi|91773629|ref|YP_566321.1| - 6.3e-11 42.7 0.2 0.0019 18.5 0.0 3.7 2 2 1 3 3 3 2 AAA domain AAA_33 PF13671.6 gi|91773629|ref|YP_566321.1| - 5.8e-10 39.5 0.0 0.00072 19.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 gi|91773629|ref|YP_566321.1| - 3.4e-09 36.8 0.0 0.00062 19.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|91773629|ref|YP_566321.1| - 3.7e-09 36.7 1.7 0.0015 18.5 0.2 4.2 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|91773629|ref|YP_566321.1| - 1.9e-08 34.9 0.0 0.0057 17.2 0.0 2.8 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|91773629|ref|YP_566321.1| - 9.6e-08 31.7 0.1 0.01 15.2 0.1 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|91773629|ref|YP_566321.1| - 2.3e-07 30.7 0.0 0.016 15.0 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_28 PF13521.6 gi|91773629|ref|YP_566321.1| - 3.8e-07 30.5 0.0 0.026 14.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|91773629|ref|YP_566321.1| - 3.8e-07 30.3 0.1 0.42 10.5 0.0 3.9 2 2 2 4 4 4 2 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|91773629|ref|YP_566321.1| - 7.9e-07 29.0 0.0 0.014 15.1 0.0 2.6 2 1 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|91773629|ref|YP_566321.1| - 8.8e-07 29.3 0.0 0.068 13.6 0.0 2.6 2 0 0 2 2 2 2 RNA helicase Sigma54_activat PF00158.26 gi|91773629|ref|YP_566321.1| - 1.3e-06 28.2 0.1 0.15 11.7 0.0 3.5 2 2 1 3 3 3 2 Sigma-54 interaction domain AAA_7 PF12775.7 gi|91773629|ref|YP_566321.1| - 2e-06 27.5 0.0 0.038 13.5 0.0 2.8 3 1 0 3 3 2 2 P-loop containing dynein motor region AAA_25 PF13481.6 gi|91773629|ref|YP_566321.1| - 2.5e-06 27.2 3.9 0.31 10.6 0.5 4.1 3 1 0 3 3 3 2 AAA domain DUF815 PF05673.13 gi|91773629|ref|YP_566321.1| - 4.8e-06 25.9 0.0 0.064 12.4 0.0 2.8 2 1 1 3 3 3 2 Protein of unknown function (DUF815) NACHT PF05729.12 gi|91773629|ref|YP_566321.1| - 8.6e-06 25.8 0.2 0.99 9.3 0.0 4.1 2 2 1 4 4 4 1 NACHT domain TsaE PF02367.17 gi|91773629|ref|YP_566321.1| - 2.1e-05 24.5 0.0 0.39 10.7 0.1 2.8 2 1 1 3 3 3 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 gi|91773629|ref|YP_566321.1| - 2.2e-05 23.8 0.0 0.23 10.7 0.0 2.6 2 0 0 2 2 2 2 Zeta toxin AAA_3 PF07726.11 gi|91773629|ref|YP_566321.1| - 2.6e-05 24.1 0.0 0.15 11.9 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|91773629|ref|YP_566321.1| - 2.9e-05 24.4 0.6 0.19 12.0 0.0 2.9 2 1 0 3 3 2 2 AAA domain ABC_tran PF00005.27 gi|91773629|ref|YP_566321.1| - 4.6e-05 23.9 0.0 0.25 11.8 0.0 2.6 2 0 0 2 2 2 2 ABC transporter Parvo_NS1 PF01057.17 gi|91773629|ref|YP_566321.1| - 7.7e-05 21.9 0.1 0.21 10.6 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 PhoH PF02562.16 gi|91773629|ref|YP_566321.1| - 0.0001 21.8 0.3 0.41 10.1 0.0 2.8 3 0 0 3 3 2 2 PhoH-like protein AAA_30 PF13604.6 gi|91773629|ref|YP_566321.1| - 0.00011 22.0 0.0 0.72 9.5 0.0 2.7 2 0 0 2 2 2 2 AAA domain ATPase PF06745.13 gi|91773629|ref|YP_566321.1| - 0.00035 20.0 0.3 1.7 7.9 0.0 3.3 2 1 1 3 3 3 2 KaiC TniB PF05621.11 gi|91773629|ref|YP_566321.1| - 0.00038 19.9 0.0 0.68 9.3 0.0 3.8 5 1 1 6 6 4 1 Bacterial TniB protein ATP-synt_ab PF00006.25 gi|91773629|ref|YP_566321.1| - 0.00046 19.9 0.0 0.61 9.7 0.0 2.4 2 0 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain Sigma54_activ_2 PF14532.6 gi|91773629|ref|YP_566321.1| - 0.00051 20.2 0.0 0.85 9.7 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_17 PF13207.6 gi|91773629|ref|YP_566321.1| - 0.00062 20.2 0.1 2.1 8.7 0.0 3.2 3 0 0 3 3 3 1 AAA domain AAA_11 PF13086.6 gi|91773629|ref|YP_566321.1| - 0.00068 19.5 0.4 1.5 8.6 0.0 2.6 3 0 0 3 3 2 2 AAA domain NB-ARC PF00931.22 gi|91773629|ref|YP_566321.1| - 0.0007 18.9 0.0 0.96 8.6 0.0 2.6 2 0 0 2 2 2 2 NB-ARC domain DUF2075 PF09848.9 gi|91773629|ref|YP_566321.1| - 0.0013 18.0 0.0 1.3 8.2 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Bac_DnaA PF00308.18 gi|91773629|ref|YP_566321.1| - 0.002 18.0 0.0 3.1 7.6 0.0 3.2 2 2 0 2 2 2 1 Bacterial dnaA protein Guanylate_kin PF00625.21 gi|91773629|ref|YP_566321.1| - 0.0039 16.9 0.8 5.8 6.6 0.0 4.1 2 2 3 5 5 5 0 Guanylate kinase NTPase_1 PF03266.15 gi|91773629|ref|YP_566321.1| - 0.0056 16.6 0.2 6.2 6.7 0.0 3.3 2 1 1 3 3 3 0 NTPase Cytidylate_kin2 PF13189.6 gi|91773629|ref|YP_566321.1| - 0.0084 16.3 0.2 6.1 6.9 0.0 2.8 3 0 0 3 3 2 0 Cytidylate kinase-like family Vps4_C PF09336.10 gi|91773629|ref|YP_566321.1| - 0.0089 16.0 0.2 0.55 10.3 0.0 2.8 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AFG1_ATPase PF03969.16 gi|91773629|ref|YP_566321.1| - 0.0093 14.9 0.0 3.3 6.5 0.0 2.5 2 0 0 2 2 2 0 AFG1-like ATPase Rad17 PF03215.15 gi|91773629|ref|YP_566321.1| - 0.0098 15.8 0.0 1.4 8.8 0.0 2.6 2 1 0 2 2 2 1 Rad17 P-loop domain Cytidylate_kin PF02224.18 gi|91773629|ref|YP_566321.1| - 0.015 15.1 0.1 4.8 6.9 0.0 2.5 2 0 0 2 2 2 0 Cytidylate kinase SKI PF01202.22 gi|91773629|ref|YP_566321.1| - 0.031 14.4 0.4 5.9 7.0 0.0 2.8 3 0 0 3 3 2 0 Shikimate kinase KAP_NTPase PF07693.14 gi|91773629|ref|YP_566321.1| - 0.042 13.1 0.3 1.5 8.0 0.1 3.0 2 2 0 3 3 3 0 KAP family P-loop domain IPT PF01745.16 gi|91773629|ref|YP_566321.1| - 0.045 13.1 0.1 14 5.0 0.0 2.8 3 0 0 3 3 3 0 Isopentenyl transferase VASP_tetra PF08776.11 gi|91773629|ref|YP_566321.1| - 0.052 13.1 0.0 0.38 10.4 0.0 2.6 1 0 0 1 1 1 0 VASP tetramerisation domain MCM PF00493.23 gi|91773629|ref|YP_566321.1| - 0.098 11.7 0.0 11 5.1 0.0 3.1 4 0 0 4 4 4 0 MCM P-loop domain Viral_helicase1 PF01443.18 gi|91773629|ref|YP_566321.1| - 0.14 11.9 0.0 1.9 8.2 0.0 2.1 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase PIN_5 PF08745.11 gi|91773630|ref|YP_566322.1| - 6.2e-94 313.2 0.2 7.1e-94 313.0 0.2 1.0 1 0 0 1 1 1 1 PINc domain ribonuclease DUF2795 PF11387.8 gi|91773630|ref|YP_566322.1| - 0.09 13.0 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2795) Cul7 PF11515.8 gi|91773630|ref|YP_566322.1| - 0.14 12.4 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Mouse development and cellular proliferation protein Cullin-7 UbiA PF01040.18 gi|91773631|ref|YP_566323.1| - 2.2e-43 148.4 18.3 3.2e-43 147.9 18.3 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family NadA PF02445.16 gi|91773632|ref|YP_566324.1| - 1.2e-118 395.7 7.3 1.3e-118 395.5 7.3 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein DUF108 PF01958.18 gi|91773633|ref|YP_566325.1| - 1.1e-36 125.1 0.7 1.9e-36 124.3 0.7 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.16 gi|91773633|ref|YP_566325.1| - 1.6e-24 86.8 0.1 2.9e-24 86.0 0.1 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|91773633|ref|YP_566325.1| - 3.5e-06 27.1 0.3 6.2e-06 26.3 0.3 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.24 gi|91773633|ref|YP_566325.1| - 7.3e-06 26.4 0.3 1.6e-05 25.3 0.1 1.6 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|91773633|ref|YP_566325.1| - 2.6e-05 24.7 0.1 6.3e-05 23.5 0.1 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 gi|91773633|ref|YP_566325.1| - 0.00079 20.3 0.1 0.0028 18.5 0.1 1.8 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 gi|91773633|ref|YP_566325.1| - 0.0047 16.3 0.1 0.0096 15.3 0.1 1.7 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|91773633|ref|YP_566325.1| - 0.023 14.7 0.0 0.046 13.7 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 gi|91773633|ref|YP_566325.1| - 0.026 14.7 0.1 0.043 14.0 0.1 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Rossmann-like PF10727.9 gi|91773633|ref|YP_566325.1| - 0.082 12.8 0.1 0.15 12.0 0.1 1.5 1 0 0 1 1 1 0 Rossmann-like domain Sacchrp_dh_NADP PF03435.18 gi|91773633|ref|YP_566325.1| - 0.14 12.4 2.1 0.29 11.4 2.1 1.6 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain QRPTase_C PF01729.19 gi|91773634|ref|YP_566326.1| - 1.5e-56 190.8 1.4 2.1e-56 190.3 1.4 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|91773634|ref|YP_566326.1| - 2.1e-23 82.2 0.0 4.1e-23 81.2 0.0 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.19 gi|91773634|ref|YP_566326.1| - 0.0057 16.1 0.4 0.011 15.1 0.3 1.6 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family TMP-TENI PF02581.17 gi|91773634|ref|YP_566326.1| - 0.022 14.1 0.5 0.045 13.1 0.5 1.5 1 1 0 1 1 1 0 Thiamine monophosphate synthase ALAD PF00490.21 gi|91773634|ref|YP_566326.1| - 0.025 13.8 0.1 0.042 13.0 0.1 1.3 1 0 0 1 1 1 0 Delta-aminolevulinic acid dehydratase KDGP_aldolase PF07071.11 gi|91773634|ref|YP_566326.1| - 0.039 13.8 1.0 0.12 12.1 0.5 1.9 1 1 1 2 2 2 0 KDGP aldolase PRAI PF00697.22 gi|91773634|ref|YP_566326.1| - 0.041 13.7 0.5 0.08 12.7 0.5 1.5 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DUF11 PF01345.18 gi|91773635|ref|YP_566327.1| - 4.5e-09 36.5 2.6 3.8e-05 23.9 0.0 3.0 3 1 0 3 3 3 2 Domain of unknown function DUF11 BatD PF13584.6 gi|91773635|ref|YP_566327.1| - 1.1e-06 27.8 3.6 0.0062 15.4 0.8 2.5 1 1 0 2 2 2 2 Oxygen tolerance TRAP_beta PF05753.14 gi|91773635|ref|YP_566327.1| - 2.3e-06 27.1 2.9 0.038 13.4 0.2 2.7 1 1 1 2 2 2 2 Translocon-associated protein beta (TRAPB) CARDB PF07705.11 gi|91773635|ref|YP_566327.1| - 1.7e-05 25.0 5.2 0.12 12.7 0.1 3.7 3 1 0 3 3 3 2 CARDB bMG10 PF17973.1 gi|91773635|ref|YP_566327.1| - 0.00011 22.4 0.7 3.2 8.0 0.1 3.5 2 1 1 3 3 3 2 Bacterial Alpha-2-macroglobulin MG10 domain NPCBM_assoc PF10633.9 gi|91773635|ref|YP_566327.1| - 0.0022 18.2 0.5 2.1 8.7 0.0 3.1 3 0 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase Integrin_alpha2 PF08441.12 gi|91773635|ref|YP_566327.1| - 0.0048 15.8 0.2 0.056 12.3 0.1 2.0 2 0 0 2 2 2 1 Integrin alpha Peptidase_A4 PF01828.17 gi|91773635|ref|YP_566327.1| - 0.04 13.4 1.0 0.7 9.3 0.1 2.4 2 0 0 2 2 2 0 Peptidase A4 family Cupredoxin_1 PF13473.6 gi|91773635|ref|YP_566327.1| - 0.058 13.5 8.0 0.97 9.6 2.0 3.4 2 2 0 2 2 2 0 Cupredoxin-like domain PLAT PF01477.23 gi|91773635|ref|YP_566327.1| - 0.092 13.3 2.6 0.31 11.6 0.1 2.6 2 1 1 3 3 3 0 PLAT/LH2 domain Tubulin PF00091.25 gi|91773636|ref|YP_566328.1| - 5.2e-34 118.2 0.3 1.3e-33 116.9 0.3 1.7 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_2 PF13809.6 gi|91773636|ref|YP_566328.1| - 8.5e-06 25.2 0.0 1.7e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 Tubulin like GHL15 PF14885.6 gi|91773636|ref|YP_566328.1| - 0.18 11.8 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Hypothetical glycosyl hydrolase family 15 DUF296 PF03479.15 gi|91773637|ref|YP_566329.1| - 6.1e-18 65.2 0.1 7e-18 65.0 0.1 1.0 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain DSPc PF00782.20 gi|91773637|ref|YP_566329.1| - 0.19 11.6 0.0 0.27 11.1 0.0 1.2 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain TrmB PF01978.19 gi|91773638|ref|YP_566330.1| - 3.8e-05 23.5 1.2 5e-05 23.1 0.0 1.8 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB SMC_ScpB PF04079.16 gi|91773638|ref|YP_566330.1| - 0.005 16.5 0.0 0.0065 16.1 0.0 1.3 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB MarR_2 PF12802.7 gi|91773638|ref|YP_566330.1| - 0.005 16.7 0.0 0.0079 16.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_37 PF13744.6 gi|91773638|ref|YP_566330.1| - 0.0064 16.4 0.1 0.013 15.4 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|91773638|ref|YP_566330.1| - 0.01 15.7 0.2 0.39 10.6 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family BsuBI_PstI_RE_N PF17728.1 gi|91773638|ref|YP_566330.1| - 0.027 14.4 0.0 0.036 13.9 0.0 1.2 1 0 0 1 1 1 0 BsuBI/PstI restriction endonuclease HTH domain Enolase_C PF00113.22 gi|91773639|ref|YP_566331.1| - 8.4e-117 389.6 0.5 1.4e-116 388.9 0.5 1.3 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|91773639|ref|YP_566331.1| - 2e-59 199.5 0.1 3.8e-59 198.5 0.1 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|91773639|ref|YP_566331.1| - 8.4e-07 28.8 0.0 1.3e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|91773639|ref|YP_566331.1| - 0.055 12.6 0.0 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus DNA_pol_B PF00136.21 gi|91773640|ref|YP_566332.1| - 1.1e-112 377.1 0.0 1.4e-112 376.7 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|91773640|ref|YP_566332.1| - 8.1e-53 179.7 0.0 1.1e-52 179.2 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_2 PF03175.13 gi|91773640|ref|YP_566332.1| - 0.015 14.2 0.1 0.066 12.1 0.0 1.9 1 1 0 2 2 2 0 DNA polymerase type B, organellar and viral DNA_pol_B_exo2 PF10108.9 gi|91773640|ref|YP_566332.1| - 0.1 12.3 0.0 0.25 11.0 0.0 1.6 2 0 0 2 2 2 0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DUF4367 PF14285.6 gi|91773641|ref|YP_566333.1| - 0.00042 20.7 0.1 0.0006 20.2 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4367) S-layer PF07752.11 gi|91773642|ref|YP_566334.1| - 7e-156 516.9 26.3 1.5e-82 276.5 7.8 2.9 3 0 0 3 3 3 2 S-layer protein PGF-CTERM PF18204.1 gi|91773642|ref|YP_566334.1| - 5.1e-10 39.0 1.8 5.1e-10 39.0 1.8 2.0 2 0 0 2 2 2 1 PGF-CTERM motif FHA_2 PF17913.1 gi|91773642|ref|YP_566334.1| - 0.0077 16.5 0.0 7.6 6.9 0.0 3.5 3 0 0 3 3 3 1 FHA domain Big_9 PF17963.1 gi|91773642|ref|YP_566334.1| - 0.08 13.7 0.1 0.08 13.7 0.1 5.0 5 1 0 5 5 5 0 Bacterial Ig domain ATPase PF06745.13 gi|91773643|ref|YP_566335.1| - 6.1e-72 241.7 0.4 6.9e-72 241.5 0.4 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|91773643|ref|YP_566335.1| - 0.0054 16.3 0.0 0.056 13.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|91773643|ref|YP_566335.1| - 0.067 12.4 0.0 0.099 11.9 0.0 1.4 1 0 0 1 1 1 0 Rad51 DnaB_C PF03796.15 gi|91773643|ref|YP_566335.1| - 0.068 12.5 0.0 0.14 11.4 0.0 1.7 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain ResIII PF04851.15 gi|91773643|ref|YP_566335.1| - 0.092 12.7 0.0 0.17 11.9 0.0 1.5 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit E1-E2_ATPase PF00122.20 gi|91773644|ref|YP_566336.1| - 3.2e-52 176.7 5.3 3.2e-52 176.7 5.3 4.1 3 1 1 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|91773644|ref|YP_566336.1| - 3.8e-37 127.8 13.3 3.8e-37 127.8 13.3 2.1 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|91773644|ref|YP_566336.1| - 9.6e-26 91.4 3.4 2.9e-24 86.5 3.4 2.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|91773644|ref|YP_566336.1| - 5.3e-22 77.7 0.0 1e-21 76.8 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|91773644|ref|YP_566336.1| - 6.1e-14 51.5 0.1 6.1e-14 51.5 0.1 2.2 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus HAD PF12710.7 gi|91773644|ref|YP_566336.1| - 8.1e-05 23.1 0.0 0.00042 20.8 0.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|91773644|ref|YP_566336.1| - 0.0011 18.8 0.5 0.046 13.5 0.3 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase DUF2663 PF10864.8 gi|91773644|ref|YP_566336.1| - 9.2 6.7 10.5 6.3 7.2 1.0 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF2663) Putative_PNPOx PF01243.20 gi|91773645|ref|YP_566337.1| - 2.3e-16 59.8 0.0 3.2e-16 59.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|91773645|ref|YP_566337.1| - 1.8e-08 34.5 0.0 2.2e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|91773645|ref|YP_566337.1| - 3.4e-07 30.0 0.0 4e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Pyrid_oxidase_2 PF13883.6 gi|91773645|ref|YP_566337.1| - 0.046 13.7 0.0 0.098 12.6 0.0 1.6 1 1 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase PAS_3 PF08447.12 gi|91773646|ref|YP_566338.1| - 2.4e-52 175.2 4.9 6.2e-17 61.7 0.2 3.2 3 0 0 3 3 3 3 PAS fold PAS PF00989.25 gi|91773646|ref|YP_566338.1| - 3.1e-16 59.4 3.5 6.5e-06 26.1 0.0 4.0 3 2 0 3 3 3 3 PAS fold PAS_9 PF13426.7 gi|91773646|ref|YP_566338.1| - 5.4e-14 52.3 2.6 0.00016 21.9 0.0 3.3 3 0 0 3 3 3 3 PAS domain PAS_11 PF14598.6 gi|91773646|ref|YP_566338.1| - 4.9e-11 42.8 0.1 0.0006 19.9 0.0 3.7 3 1 1 4 4 4 2 PAS domain PAS_4 PF08448.10 gi|91773646|ref|YP_566338.1| - 1.3e-08 35.0 0.2 0.035 14.4 0.0 3.4 3 0 0 3 3 3 2 PAS fold DUF3823 PF12866.7 gi|91773646|ref|YP_566338.1| - 0.0039 17.4 0.4 31 5.0 0.0 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3823) N-terminal domain DUF4265 PF14085.6 gi|91773646|ref|YP_566338.1| - 0.0058 16.6 0.0 0.31 11.0 0.0 2.9 3 0 0 3 3 3 1 Domain of unknown function (DUF4265) VanY PF02557.17 gi|91773646|ref|YP_566338.1| - 0.16 11.7 0.2 4.5 7.1 0.0 2.6 3 0 0 3 3 3 0 D-alanyl-D-alanine carboxypeptidase LAMTOR PF15454.6 gi|91773646|ref|YP_566338.1| - 0.31 11.7 6.2 4 8.1 0.1 4.1 4 0 0 4 4 4 0 Late endosomal/lysosomal adaptor and MAPK and MTOR activator NdhS PF11623.8 gi|91773646|ref|YP_566338.1| - 1 9.1 3.7 11 5.7 0.1 3.1 3 0 0 3 3 3 0 NAD(P)H dehydrogenase subunit S Na_H_Exchanger PF00999.21 gi|91773647|ref|YP_566339.1| - 2.4e-61 207.7 53.4 3e-61 207.3 53.4 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family AveC_like PF17198.4 gi|91773647|ref|YP_566339.1| - 1.4 8.3 14.4 0.025 14.0 4.0 2.9 2 1 0 3 3 3 0 Spirocyclase AveC-like CBS PF00571.28 gi|91773648|ref|YP_566340.1| - 1.3e-22 79.9 3.2 3.3e-11 43.4 0.4 2.2 2 0 0 2 2 2 2 CBS domain ABC_tran PF00005.27 gi|91773649|ref|YP_566341.1| - 1.1e-32 113.5 0.0 1.8e-32 112.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773649|ref|YP_566341.1| - 4.7e-12 46.3 1.1 1.1e-06 28.6 0.0 2.6 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91773649|ref|YP_566341.1| - 3.8e-07 29.8 0.1 1.1e-06 28.3 0.1 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|91773649|ref|YP_566341.1| - 8.2e-05 22.5 1.2 0.0016 18.3 0.1 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|91773649|ref|YP_566341.1| - 0.0015 18.3 0.3 0.003 17.2 0.3 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|91773649|ref|YP_566341.1| - 0.016 15.1 0.1 0.037 13.9 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 gi|91773649|ref|YP_566341.1| - 0.019 15.4 0.6 0.04 14.4 0.4 1.6 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|91773649|ref|YP_566341.1| - 0.1 12.1 0.1 0.23 11.0 0.1 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 gi|91773649|ref|YP_566341.1| - 0.11 12.5 0.0 0.3 11.2 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF2813 PF11398.8 gi|91773649|ref|YP_566341.1| - 0.21 10.8 0.1 0.5 9.6 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) CbiQ PF02361.16 gi|91773650|ref|YP_566342.1| - 4.3e-39 134.4 11.6 6.8e-39 133.7 11.6 1.2 1 0 0 1 1 1 1 Cobalt transport protein DUF4212 PF13937.6 gi|91773650|ref|YP_566342.1| - 5 7.6 12.1 1.5 9.3 5.3 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) CbiN PF02553.15 gi|91773651|ref|YP_566343.1| - 2.6e-25 88.2 0.9 7.6e-25 86.7 0.9 1.6 1 1 0 1 1 1 1 Cobalt transport protein component CbiN CbiM PF01891.16 gi|91773652|ref|YP_566344.1| - 1e-52 179.0 22.1 1.2e-52 178.8 22.1 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region CbiD PF01888.17 gi|91773653|ref|YP_566345.1| - 4.2e-50 170.4 3.4 6.5e-50 169.8 3.4 1.3 1 0 0 1 1 1 1 CbiD sCache_like PF16736.5 gi|91773653|ref|YP_566345.1| - 0.1 12.7 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Single Cache-like Rep_fac-A_3 PF08661.11 gi|91773653|ref|YP_566345.1| - 0.13 12.6 0.2 0.46 10.9 0.0 1.9 2 0 0 2 2 2 0 Replication factor A protein 3 DNA_mis_repair PF01119.19 gi|91773654|ref|YP_566346.1| - 2.1e-36 124.2 0.0 3.5e-36 123.5 0.0 1.3 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.11 gi|91773654|ref|YP_566346.1| - 2.4e-36 124.7 0.0 4.4e-36 123.8 0.0 1.4 1 0 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.6 gi|91773654|ref|YP_566346.1| - 7.8e-12 45.2 0.2 2.1e-11 43.8 0.2 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|91773654|ref|YP_566346.1| - 1.9e-09 38.0 0.0 5.9e-09 36.4 0.0 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MutS_V PF00488.21 gi|91773655|ref|YP_566347.1| - 6.3e-85 284.0 0.2 1.1e-84 283.2 0.2 1.4 1 0 0 1 1 1 1 MutS domain V MutS_I PF01624.20 gi|91773655|ref|YP_566347.1| - 2.7e-43 146.8 0.0 6.7e-43 145.5 0.0 1.7 1 0 0 1 1 1 1 MutS domain I MutS_III PF05192.18 gi|91773655|ref|YP_566347.1| - 5.7e-42 144.1 0.2 1.4e-41 142.8 0.0 1.8 2 0 0 2 2 2 1 MutS domain III MutS_IV PF05190.18 gi|91773655|ref|YP_566347.1| - 2.3e-30 104.8 0.3 1.1e-29 102.6 0.1 2.2 2 0 0 2 2 2 1 MutS family domain IV MutS_II PF05188.17 gi|91773655|ref|YP_566347.1| - 6.5e-26 91.2 0.0 4.5e-25 88.5 0.0 2.3 2 0 0 2 2 2 1 MutS domain II AAA_27 PF13514.6 gi|91773655|ref|YP_566347.1| - 0.026 14.1 0.0 0.053 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|91773655|ref|YP_566347.1| - 0.061 13.1 0.0 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF2108 PF09881.9 gi|91773656|ref|YP_566348.1| - 0.073 13.0 12.2 0.37 10.8 1.7 3.3 3 0 0 3 3 3 0 Predicted membrane protein (DUF2108) DUF3959 PF13105.6 gi|91773656|ref|YP_566348.1| - 0.084 12.4 0.2 0.084 12.4 0.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3959) DUF2637 PF10935.8 gi|91773656|ref|YP_566348.1| - 0.94 9.3 2.9 1.5 8.7 2.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2637) Pox_A14 PF05767.12 gi|91773656|ref|YP_566348.1| - 1.6 9.0 5.8 0.66 10.2 3.3 1.6 1 1 0 1 1 1 0 Poxvirus virion envelope protein A14 DUF2530 PF10745.9 gi|91773656|ref|YP_566348.1| - 2.6 8.3 6.3 0.23 11.7 0.7 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2530) DUF4231 PF14015.6 gi|91773657|ref|YP_566349.1| - 1.3e-25 89.9 0.3 1.7e-25 89.5 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4231) SLATT_1 PF18181.1 gi|91773657|ref|YP_566349.1| - 2.5e-10 40.3 2.0 3.2e-10 40.0 2.0 1.1 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain 1 HisKA_7TM PF16927.5 gi|91773657|ref|YP_566349.1| - 0.0022 18.1 0.0 0.0029 17.7 0.0 1.1 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase DUF3754 PF12576.8 gi|91773657|ref|YP_566349.1| - 0.011 15.7 0.4 0.017 15.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3754) ArenaCapSnatch PF17296.2 gi|91773657|ref|YP_566349.1| - 0.084 12.3 0.1 0.59 9.5 0.0 2.0 2 0 0 2 2 2 0 Arenavirus cap snatching domain TED_complement PF07678.14 gi|91773658|ref|YP_566350.1| - 8.4e-81 271.4 0.0 1.3e-80 270.8 0.0 1.2 1 0 0 1 1 1 1 A-macroglobulin TED domain A2M PF00207.22 gi|91773658|ref|YP_566350.1| - 5e-28 96.8 0.2 2.9e-26 91.1 0.0 3.8 4 0 0 4 4 4 1 Alpha-2-macroglobulin family A2M_BRD PF07703.14 gi|91773658|ref|YP_566350.1| - 3.1e-23 82.7 3.3 3e-21 76.2 0.6 3.9 3 1 0 3 3 3 1 Alpha-2-macroglobulin bait region domain MG2 PF01835.19 gi|91773658|ref|YP_566350.1| - 1.1e-18 67.5 0.0 4.1e-14 52.8 0.0 4.1 4 0 0 4 4 3 1 MG2 domain A2M_recep PF07677.14 gi|91773658|ref|YP_566350.1| - 3.1e-17 63.0 0.0 1.2e-16 61.1 0.0 2.1 1 0 0 1 1 1 1 A-macroglobulin receptor binding domain MG3 PF17791.1 gi|91773658|ref|YP_566350.1| - 1.4e-11 44.5 0.1 4.8e-11 42.8 0.1 1.9 1 0 0 1 1 1 1 Macroglobulin domain MG3 MG4 PF17789.1 gi|91773658|ref|YP_566350.1| - 1.3e-07 31.7 0.8 3.5e-05 23.9 0.0 4.2 4 0 0 4 4 4 1 Macroglobulin domain MG4 SQHop_cyclase_C PF13243.6 gi|91773658|ref|YP_566350.1| - 1e-06 28.1 1.0 0.0035 16.5 0.1 3.2 3 0 0 3 3 3 2 Squalene-hopene cyclase C-terminal domain GYD PF08734.11 gi|91773658|ref|YP_566350.1| - 0.0036 17.2 0.1 0.017 15.0 0.1 2.3 1 0 0 1 1 1 1 GYD domain fn3_3 PF14686.6 gi|91773658|ref|YP_566350.1| - 0.17 11.7 5.8 0.37 10.6 0.0 3.4 3 0 0 3 3 3 0 Polysaccharide lyase family 4, domain II DUF4124 PF13511.6 gi|91773658|ref|YP_566350.1| - 0.18 12.1 1.0 23 5.4 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4124) PYC_OADA PF02436.18 gi|91773659|ref|YP_566351.1| - 0.043 13.6 0.0 0.078 12.7 0.0 1.3 1 0 0 1 1 1 0 Conserved carboxylase domain LPAM_1 PF08139.12 gi|91773659|ref|YP_566351.1| - 0.24 12.0 1.4 0.55 10.8 1.4 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site PepSY PF03413.19 gi|91773660|ref|YP_566352.1| - 2.3e-05 24.9 4.1 0.4 11.3 0.1 4.1 3 2 0 3 3 3 2 Peptidase propeptide and YPEB domain DUF1831 PF08866.10 gi|91773661|ref|YP_566353.1| - 0.027 14.9 0.2 0.07 13.6 0.1 1.6 1 1 1 2 2 2 0 Putative amino acid metabolism CHU_C PF13585.6 gi|91773661|ref|YP_566353.1| - 0.04 14.0 0.8 0.099 12.7 0.4 1.8 1 1 1 2 2 2 0 C-terminal domain of CHU protein family Sm_like PF16243.5 gi|91773661|ref|YP_566353.1| - 0.088 13.0 0.1 0.78 9.9 0.0 2.1 2 0 0 2 2 2 0 Sm_like domain HCMV_UL124 PF17609.2 gi|91773661|ref|YP_566353.1| - 0.13 12.5 0.0 0.26 11.5 0.0 1.5 1 1 0 1 1 1 0 Family of unknown function DUF5337 PF17272.2 gi|91773661|ref|YP_566353.1| - 0.15 11.9 0.1 0.23 11.3 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5337) Reprolysin_5 PF13688.6 gi|91773662|ref|YP_566354.1| - 1.6e-16 61.0 3.5 3.1e-16 60.1 3.5 1.4 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_3 PF13582.6 gi|91773662|ref|YP_566354.1| - 6e-09 36.5 0.8 1.7e-08 35.0 0.2 2.0 2 0 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like Pep_M12B_propep PF01562.19 gi|91773662|ref|YP_566354.1| - 4.1e-07 30.3 0.0 7.9e-07 29.4 0.0 1.5 1 0 0 1 1 1 1 Reprolysin family propeptide Reprolysin_4 PF13583.6 gi|91773662|ref|YP_566354.1| - 7.4e-06 25.8 4.0 1.8e-05 24.5 4.0 1.7 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_2 PF13574.6 gi|91773662|ref|YP_566354.1| - 0.00058 19.8 0.7 0.0016 18.4 0.7 1.8 1 1 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin PF01421.19 gi|91773662|ref|YP_566354.1| - 0.0016 18.3 0.0 0.0028 17.6 0.0 1.3 1 0 0 1 1 1 1 Reprolysin (M12B) family zinc metalloprotease PTSIIA_gutA PF03829.13 gi|91773662|ref|YP_566354.1| - 0.011 15.6 0.4 0.24 11.3 0.0 2.3 2 0 0 2 2 2 0 PTS system glucitol/sorbitol-specific IIA component ETRAMP PF09716.10 gi|91773662|ref|YP_566354.1| - 0.18 11.9 1.4 0.47 10.6 1.4 1.8 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) FMN_red PF03358.15 gi|91773663|ref|YP_566355.1| - 4.3e-28 98.0 0.0 5e-28 97.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|91773663|ref|YP_566355.1| - 8.8e-13 48.4 0.0 1.1e-12 48.1 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|91773663|ref|YP_566355.1| - 0.00028 21.1 0.0 0.00059 20.1 0.0 1.5 2 0 0 2 2 2 1 Flavodoxin domain HEPN_Apea PF18739.1 gi|91773664|ref|YP_566356.1| - 0.0007 20.0 2.0 0.0021 18.4 0.3 1.9 1 1 1 2 2 2 1 Apea-like HEPN DUF2118 PF09891.9 gi|91773664|ref|YP_566356.1| - 0.064 13.2 0.1 0.064 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) HEPN_Apea PF18739.1 gi|91773665|ref|YP_566357.1| - 0.0056 17.1 0.2 0.0056 17.1 0.2 2.9 2 1 1 3 3 3 2 Apea-like HEPN ABC2_membrane PF01061.24 gi|91773666|ref|YP_566358.1| - 2.6e-24 85.8 22.7 4.2e-24 85.2 22.7 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|91773666|ref|YP_566358.1| - 3.5e-10 39.5 33.3 4.9e-10 39.1 33.3 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|91773667|ref|YP_566359.1| - 4.1e-33 114.8 0.0 1.5e-32 113.0 0.0 1.8 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|91773667|ref|YP_566359.1| - 1.8e-13 51.0 0.0 4.8e-06 26.6 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|91773667|ref|YP_566359.1| - 0.00011 22.1 0.0 0.051 13.3 0.0 2.2 1 1 1 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 gi|91773667|ref|YP_566359.1| - 0.0017 17.8 0.0 0.093 12.2 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|91773667|ref|YP_566359.1| - 0.0018 18.8 0.9 0.0034 17.9 0.9 1.6 1 1 0 1 1 1 1 AAA domain DUF4162 PF13732.6 gi|91773667|ref|YP_566359.1| - 0.0033 18.1 0.1 0.01 16.6 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) G-alpha PF00503.20 gi|91773667|ref|YP_566359.1| - 0.01 15.0 0.0 0.027 13.7 0.0 1.4 1 1 0 1 1 1 0 G-protein alpha subunit AAA_27 PF13514.6 gi|91773667|ref|YP_566359.1| - 0.013 15.1 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|91773667|ref|YP_566359.1| - 0.045 14.0 0.7 0.73 10.1 0.7 2.4 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|91773667|ref|YP_566359.1| - 0.064 11.9 0.0 0.1 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|91773667|ref|YP_566359.1| - 0.13 11.9 0.0 0.42 10.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|91773667|ref|YP_566359.1| - 0.15 12.3 0.0 1.3 9.3 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Sec20 PF03908.13 gi|91773668|ref|YP_566360.1| - 0.025 14.5 2.7 7.4 6.6 0.0 2.8 2 0 0 2 2 2 0 Sec20 DUF4805 PF16063.5 gi|91773668|ref|YP_566360.1| - 0.028 13.7 2.5 0.058 12.7 2.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4805) Laminin_II PF06009.12 gi|91773668|ref|YP_566360.1| - 0.034 14.2 7.3 0.036 14.1 3.7 2.5 2 0 0 2 2 2 0 Laminin Domain II Prominin PF05478.11 gi|91773668|ref|YP_566360.1| - 0.037 12.0 3.0 0.035 12.1 0.4 1.9 2 0 0 2 2 2 0 Prominin DUF1664 PF07889.12 gi|91773668|ref|YP_566360.1| - 0.047 13.7 0.4 0.047 13.7 0.4 3.7 4 1 0 4 4 4 0 Protein of unknown function (DUF1664) Tox-REase-5 PF15648.6 gi|91773668|ref|YP_566360.1| - 0.051 14.1 0.2 1.3 9.6 0.1 2.6 2 0 0 2 2 2 0 Restriction endonuclease fold toxin 5 Baculo_PEP_C PF04513.12 gi|91773668|ref|YP_566360.1| - 0.13 12.3 11.3 0.033 14.2 3.5 3.0 3 1 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus CK2S PF15011.6 gi|91773668|ref|YP_566360.1| - 0.29 11.0 7.7 0.45 10.4 0.4 3.3 3 1 0 3 3 3 0 Casein Kinase 2 substrate YkyA PF10368.9 gi|91773668|ref|YP_566360.1| - 0.3 10.7 14.0 1.7 8.3 0.2 3.5 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Spectrin PF00435.21 gi|91773668|ref|YP_566360.1| - 0.55 10.7 9.2 6.6 7.3 1.0 3.6 3 1 0 3 3 3 0 Spectrin repeat HIP1_clath_bdg PF16515.5 gi|91773668|ref|YP_566360.1| - 0.81 10.3 6.0 1.5 9.5 0.9 2.9 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4140 PF13600.6 gi|91773668|ref|YP_566360.1| - 0.95 9.9 5.4 11 6.5 0.4 2.8 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) CLZ PF16526.5 gi|91773668|ref|YP_566360.1| - 0.99 9.8 7.6 0.2 12.0 1.2 3.1 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels COG5 PF10392.9 gi|91773668|ref|YP_566360.1| - 1.1 9.5 11.0 1.6 8.9 1.7 3.8 4 0 0 4 4 4 0 Golgi transport complex subunit 5 DUF948 PF06103.11 gi|91773668|ref|YP_566360.1| - 1.4 9.2 13.6 15 5.9 7.1 4.2 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) DASH_Duo1 PF08651.10 gi|91773668|ref|YP_566360.1| - 3.8 7.4 9.3 0.99 9.2 0.5 3.6 2 1 1 3 3 3 0 DASH complex subunit Duo1 Muted PF14942.6 gi|91773668|ref|YP_566360.1| - 7.7 6.9 11.0 1.2 9.5 2.5 3.2 3 0 0 3 3 3 0 Organelle biogenesis, Muted-like protein DASH_Spc19 PF08287.11 gi|91773668|ref|YP_566360.1| - 9.6 6.1 18.7 0.2 11.6 1.9 3.3 4 0 0 4 4 4 0 Spc19 HTH_3 PF01381.22 gi|91773669|ref|YP_566361.1| - 1.8e-15 56.7 0.1 2e-15 56.6 0.1 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|91773669|ref|YP_566361.1| - 3.8e-09 36.4 0.2 4e-09 36.4 0.2 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|91773669|ref|YP_566361.1| - 4e-06 27.2 0.0 4.4e-06 27.0 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 gi|91773669|ref|YP_566361.1| - 6.8e-06 26.3 0.0 7.3e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|91773669|ref|YP_566361.1| - 0.0023 17.7 0.2 0.0028 17.5 0.2 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|91773669|ref|YP_566361.1| - 0.011 15.6 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 gi|91773669|ref|YP_566361.1| - 0.015 14.8 0.1 0.025 14.1 0.1 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_11 PF08279.12 gi|91773669|ref|YP_566361.1| - 0.047 13.6 0.1 0.07 13.1 0.1 1.3 1 0 0 1 1 1 0 HTH domain MerR PF00376.23 gi|91773669|ref|YP_566361.1| - 0.08 12.7 0.0 0.16 11.8 0.0 1.6 1 1 0 1 1 1 0 MerR family regulatory protein YdaS_antitoxin PF15943.5 gi|91773669|ref|YP_566361.1| - 0.12 12.2 0.0 0.16 11.8 0.0 1.3 1 1 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DUF2178 PF09946.9 gi|91773670|ref|YP_566362.1| - 4.6e-08 33.2 0.9 7.3e-08 32.5 0.9 1.4 1 1 0 1 1 1 1 Predicted membrane protein (DUF2178) TRP PF06011.12 gi|91773670|ref|YP_566362.1| - 0.0012 17.7 2.1 0.0017 17.2 2.1 1.3 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel Peptidase_M48_N PF16491.5 gi|91773670|ref|YP_566362.1| - 0.14 12.0 5.6 0.15 12.0 0.7 2.0 2 0 0 2 2 2 0 CAAX prenyl protease N-terminal, five membrane helices DUF2178 PF09946.9 gi|91773671|ref|YP_566363.1| - 1.2e-06 28.6 2.5 2e-06 27.9 2.5 1.4 1 1 0 1 1 1 1 Predicted membrane protein (DUF2178) Polysacc_synt PF01943.17 gi|91773671|ref|YP_566363.1| - 0.0017 17.8 0.9 0.002 17.5 0.9 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein FeoB_associated PF12669.7 gi|91773671|ref|YP_566363.1| - 0.62 10.5 6.5 15 6.1 0.2 3.1 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein 4HB_MCP_1 PF12729.7 gi|91773671|ref|YP_566363.1| - 5.8 6.4 7.3 0.66 9.5 0.7 2.1 1 1 1 2 2 2 0 Four helix bundle sensory module for signal transduction PLDc_N PF13396.6 gi|91773671|ref|YP_566363.1| - 9.7 6.2 9.1 18 5.4 0.7 2.7 1 1 1 2 2 2 0 Phospholipase_D-nuclease N-terminal DUF2254 PF10011.9 gi|91773672|ref|YP_566364.1| - 6.6e-13 48.2 1.1 9.7e-13 47.7 1.1 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) HEAT_PBS PF03130.16 gi|91773672|ref|YP_566364.1| - 0.0033 17.9 1.6 17 6.4 0.0 4.6 4 0 0 4 4 4 2 PBS lyase HEAT-like repeat DHBP_synthase PF00926.19 gi|91773673|ref|YP_566365.1| - 3.7e-59 199.5 0.0 4.5e-59 199.2 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase TPALS PF18178.1 gi|91773673|ref|YP_566365.1| - 0.11 12.0 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 TIR- and PNP-associating SLOG family Lyase_8_N PF08124.11 gi|91773673|ref|YP_566365.1| - 0.15 10.9 0.0 0.24 10.3 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain CTP-dep_RFKase PF01982.16 gi|91773674|ref|YP_566366.1| - 3e-45 153.2 0.0 4.3e-45 152.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF120 FtsK_gamma PF09397.10 gi|91773674|ref|YP_566366.1| - 0.062 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Ftsk gamma domain MarR PF01047.22 gi|91773674|ref|YP_566366.1| - 0.063 13.2 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 MarR family Ion_trans PF00520.31 gi|91773675|ref|YP_566367.1| - 9.4e-33 113.4 20.4 1.2e-32 113.1 20.4 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 gi|91773675|ref|YP_566367.1| - 2.3e-14 53.1 4.5 2.3e-14 53.1 4.5 2.6 2 1 1 3 3 3 1 Ion channel DZR PF12773.7 gi|91773675|ref|YP_566367.1| - 0.0062 16.5 0.2 0.0094 16.0 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon PKD_channel PF08016.12 gi|91773675|ref|YP_566367.1| - 0.022 13.5 14.7 0.36 9.4 14.7 2.1 1 1 0 1 1 1 0 Polycystin cation channel zinc_ribbon_2 PF13240.6 gi|91773675|ref|YP_566367.1| - 0.022 14.5 3.6 0.039 13.7 3.6 1.4 1 0 0 1 1 1 0 zinc-ribbon domain zf-CHY PF05495.12 gi|91773675|ref|YP_566367.1| - 0.072 13.6 0.3 0.13 12.8 0.3 1.4 1 0 0 1 1 1 0 CHY zinc finger NOB1_Zn_bind PF08772.11 gi|91773675|ref|YP_566367.1| - 0.17 12.1 0.8 0.29 11.3 0.8 1.3 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like zf-ribbon_3 PF13248.6 gi|91773675|ref|YP_566367.1| - 0.19 11.2 4.9 0.68 9.4 4.9 1.8 1 1 0 1 1 1 0 zinc-ribbon domain pEK499_p136 PF18736.1 gi|91773675|ref|YP_566367.1| - 0.3 10.7 1.4 2.2 7.9 0.2 2.1 2 0 0 2 2 2 0 HEPN pEK499 p136 zf-CCHC_4 PF14392.6 gi|91773675|ref|YP_566367.1| - 1.2 8.9 4.7 5.2 6.9 4.8 2.0 1 1 1 2 2 2 0 Zinc knuckle Herpes_LAMP2 PF06126.11 gi|91773676|ref|YP_566368.1| - 0.0017 17.0 0.4 0.0025 16.5 0.4 1.2 1 0 0 1 1 1 1 Herpesvirus Latent membrane protein 2 DUF4307 PF14155.6 gi|91773676|ref|YP_566368.1| - 0.015 15.1 0.7 0.069 13.0 0.0 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4307) Ceramidase PF05875.12 gi|91773676|ref|YP_566368.1| - 0.034 13.6 1.4 0.054 12.9 1.4 1.3 1 0 0 1 1 1 0 Ceramidase FTR_C PF02741.15 gi|91773678|ref|YP_566370.1| - 6.7e-65 217.7 1.0 6.7e-65 217.7 1.0 1.4 2 0 0 2 2 2 1 FTR, proximal lobe FTR PF01913.18 gi|91773678|ref|YP_566370.1| - 4.8e-63 211.3 0.8 9.8e-63 210.3 0.1 1.8 2 0 0 2 2 2 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase Transglut_core PF01841.19 gi|91773679|ref|YP_566371.1| - 1.1e-12 48.4 0.0 1.4e-12 48.1 0.0 1.1 1 0 0 1 1 1 1 Transglutaminase-like superfamily TraB PF01963.17 gi|91773680|ref|YP_566372.1| - 5.7e-32 111.7 0.0 9.2e-32 111.0 0.0 1.2 1 0 0 1 1 1 1 TraB family CBS PF00571.28 gi|91773681|ref|YP_566373.1| - 1.2e-22 80.1 2.7 1.7e-10 41.2 0.2 2.3 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.22 gi|91773681|ref|YP_566373.1| - 5.7e-17 61.8 6.7 1.8e-09 37.3 0.8 3.1 1 1 1 2 2 2 2 Peptidase family M50 Peptidase_M50B PF13398.6 gi|91773681|ref|YP_566373.1| - 0.00044 20.0 1.1 0.00044 20.0 1.1 2.2 1 1 1 2 2 2 1 Peptidase M50B-like FA_desaturase PF00487.24 gi|91773681|ref|YP_566373.1| - 3.1 7.6 7.8 1.7 8.4 0.2 2.3 2 0 0 2 2 2 0 Fatty acid desaturase Pyridoxal_deC PF00282.19 gi|91773682|ref|YP_566374.1| - 1.4e-31 109.5 0.0 2.9e-31 108.6 0.0 1.4 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_1_2 PF00155.21 gi|91773682|ref|YP_566374.1| - 6.7e-09 35.4 0.0 9.3e-07 28.3 0.0 2.4 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|91773682|ref|YP_566374.1| - 2e-08 33.6 0.0 4.7e-08 32.4 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|91773682|ref|YP_566374.1| - 3.1e-05 23.4 0.0 4.7e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cdc6_C PF09079.11 gi|91773683|ref|YP_566375.1| - 7.8e-23 80.3 0.4 1.7e-22 79.1 0.4 1.6 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|91773683|ref|YP_566375.1| - 6.7e-12 45.9 0.0 1.4e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|91773683|ref|YP_566375.1| - 6.6e-09 36.4 0.2 1.6e-07 31.9 0.0 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|91773683|ref|YP_566375.1| - 3.3e-08 34.0 0.1 7.8e-08 32.8 0.1 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|91773683|ref|YP_566375.1| - 7.5e-07 28.7 0.0 1.4e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|91773683|ref|YP_566375.1| - 2.2e-05 24.5 1.0 8.5e-05 22.6 1.0 1.9 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|91773683|ref|YP_566375.1| - 3.7e-05 23.7 0.0 9.7e-05 22.3 0.0 1.7 2 0 0 2 2 2 1 NACHT domain DEAD PF00270.29 gi|91773683|ref|YP_566375.1| - 0.00042 20.1 0.3 0.79 9.5 0.0 2.7 3 0 0 3 3 3 2 DEAD/DEAH box helicase Sigma54_activat PF00158.26 gi|91773683|ref|YP_566375.1| - 0.00056 19.7 0.0 0.0014 18.4 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain KAP_NTPase PF07693.14 gi|91773683|ref|YP_566375.1| - 0.00071 18.9 0.1 0.87 8.8 0.1 2.2 2 0 0 2 2 2 2 KAP family P-loop domain RuvB_N PF05496.12 gi|91773683|ref|YP_566375.1| - 0.00088 19.0 0.0 0.076 12.7 0.0 2.6 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain DUF2075 PF09848.9 gi|91773683|ref|YP_566375.1| - 0.0055 16.0 0.0 0.0074 15.6 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_25 PF13481.6 gi|91773683|ref|YP_566375.1| - 0.0063 16.1 0.0 0.018 14.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|91773683|ref|YP_566375.1| - 0.0095 15.7 0.2 0.019 14.7 0.2 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|91773683|ref|YP_566375.1| - 0.014 16.0 0.1 0.048 14.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 gi|91773683|ref|YP_566375.1| - 0.025 13.8 0.1 0.099 11.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF815) IstB_IS21 PF01695.17 gi|91773683|ref|YP_566375.1| - 0.046 13.5 0.1 0.45 10.2 0.0 2.4 2 1 1 3 3 3 0 IstB-like ATP binding protein AAA_assoc_2 PF16193.5 gi|91773683|ref|YP_566375.1| - 0.048 14.0 0.5 0.13 12.6 0.5 1.8 1 1 0 1 1 1 0 AAA C-terminal domain Zeta_toxin PF06414.12 gi|91773683|ref|YP_566375.1| - 0.059 12.6 0.4 0.27 10.5 0.0 2.1 3 0 0 3 3 3 0 Zeta toxin FtsK_SpoIIIE PF01580.18 gi|91773683|ref|YP_566375.1| - 0.075 12.4 0.1 1 8.6 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family ResIII PF04851.15 gi|91773683|ref|YP_566375.1| - 0.084 12.9 0.2 0.3 11.0 0.1 2.0 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit TsaE PF02367.17 gi|91773683|ref|YP_566375.1| - 0.086 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Bac_DnaA PF00308.18 gi|91773683|ref|YP_566375.1| - 0.092 12.6 0.2 0.41 10.4 0.2 1.9 1 1 0 1 1 1 0 Bacterial dnaA protein AAA_2 PF07724.14 gi|91773683|ref|YP_566375.1| - 0.097 12.8 0.3 1.4 9.0 0.3 2.3 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 gi|91773683|ref|YP_566375.1| - 0.11 12.0 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|91773683|ref|YP_566375.1| - 0.12 12.7 0.0 0.31 11.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Kinesin PF00225.23 gi|91773683|ref|YP_566375.1| - 0.14 11.0 0.0 0.25 10.2 0.0 1.3 1 0 0 1 1 1 0 Kinesin motor domain Peptidase_S24 PF00717.23 gi|91773684|ref|YP_566376.1| - 1.9e-05 24.5 0.2 4.1e-05 23.5 0.2 1.6 1 1 0 1 1 1 1 Peptidase S24-like Wyosine_form PF08608.12 gi|91773685|ref|YP_566377.1| - 5.9e-23 81.0 0.0 1.2e-22 80.0 0.0 1.6 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 gi|91773685|ref|YP_566377.1| - 1.3e-16 61.4 0.2 6.8e-16 59.1 0.2 2.0 1 1 0 1 1 1 1 Radical SAM superfamily SOXp PF12336.8 gi|91773685|ref|YP_566377.1| - 0.1 13.7 0.0 0.52 11.4 0.0 2.0 2 0 0 2 2 2 0 SOX transcription factor eRF1_2 PF03464.15 gi|91773686|ref|YP_566378.1| - 5.1e-41 140.1 0.0 8.7e-41 139.4 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|91773686|ref|YP_566378.1| - 4e-32 111.0 0.1 1.1e-31 109.7 0.0 1.7 2 0 0 2 2 2 1 eRF1 domain 3 baeRF_family10 PF18854.1 gi|91773686|ref|YP_566378.1| - 8.9e-13 48.7 0.1 1.3e-12 48.1 0.1 1.3 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 acVLRF1 PF18859.1 gi|91773686|ref|YP_566378.1| - 2.4e-12 47.3 0.0 4.2e-12 46.5 0.0 1.3 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor eRF1_1 PF03463.15 gi|91773686|ref|YP_566378.1| - 2.9e-12 46.7 0.0 5.5e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 RNA_POL_M_15KD PF02150.16 gi|91773686|ref|YP_566378.1| - 0.00024 20.9 1.2 0.69 9.8 0.1 2.5 2 0 0 2 2 2 2 RNA polymerases M/15 Kd subunit HypA PF01155.19 gi|91773686|ref|YP_566378.1| - 0.03 14.3 0.1 0.059 13.4 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA baeRF_family12 PF18856.1 gi|91773686|ref|YP_566378.1| - 0.08 13.5 0.0 0.19 12.3 0.0 1.6 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 12 Zn-ribbon_8 PF09723.10 gi|91773686|ref|YP_566378.1| - 0.12 12.5 4.2 0.37 10.9 1.6 2.5 2 0 0 2 2 2 0 Zinc ribbon domain zf-IS66 PF13005.7 gi|91773686|ref|YP_566378.1| - 1.6 9.2 3.6 8.6 6.9 0.1 3.1 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 tRNA-synt_1d PF00750.19 gi|91773687|ref|YP_566379.1| - 2.8e-38 131.8 0.2 7.4e-38 130.4 0.2 1.6 2 0 0 2 2 2 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|91773687|ref|YP_566379.1| - 2.6e-32 111.5 0.1 4.8e-32 110.6 0.1 1.5 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|91773687|ref|YP_566379.1| - 3.1e-13 50.1 0.0 1.1e-12 48.4 0.0 2.0 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1f PF01921.18 gi|91773687|ref|YP_566379.1| - 2.5e-05 23.4 0.0 0.067 12.1 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 gi|91773687|ref|YP_566379.1| - 0.00039 19.9 0.1 0.00075 18.9 0.1 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|91773687|ref|YP_566379.1| - 0.00054 18.8 0.4 0.099 11.4 0.1 3.0 3 0 0 3 3 3 1 tRNA synthetases class I (M) NTase_sub_bind PF08780.11 gi|91773687|ref|YP_566379.1| - 0.034 14.1 0.1 0.083 12.9 0.1 1.6 1 0 0 1 1 1 0 Nucleotidyltransferase substrate binding protein like tRNA-synt_1 PF00133.22 gi|91773687|ref|YP_566379.1| - 0.068 11.4 0.0 0.11 10.8 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) DUF1294 PF06961.13 gi|91773688|ref|YP_566380.1| - 2.9e-25 88.3 0.6 3.9e-25 87.9 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1294) Rib PF08428.10 gi|91773688|ref|YP_566380.1| - 0.076 13.0 0.0 0.097 12.7 0.0 1.1 1 0 0 1 1 1 0 Rib/alpha-like repeat DPPIV_N PF00930.21 gi|91773689|ref|YP_566381.1| - 6.9e-05 21.8 2.1 0.0078 15.0 0.1 3.7 3 1 1 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region ANAPC4_WD40 PF12894.7 gi|91773689|ref|YP_566381.1| - 0.00012 22.3 0.0 0.0035 17.6 0.0 3.2 3 0 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 gi|91773689|ref|YP_566381.1| - 0.0015 18.4 1.7 2.1 8.4 0.0 3.9 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat Pectate_lyase22 PF14583.6 gi|91773689|ref|YP_566381.1| - 0.016 13.9 0.2 0.7 8.5 0.1 2.4 2 0 0 2 2 2 0 Oligogalacturonate lyase DUF2286 PF10051.9 gi|91773689|ref|YP_566381.1| - 0.075 12.8 0.1 0.2 11.4 0.1 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2286) Serpin PF00079.20 gi|91773690|ref|YP_566382.1| - 9.2e-116 387.2 1.5 1.1e-115 387.0 1.5 1.0 1 0 0 1 1 1 1 Serpin (serine protease inhibitor) Transglut_core PF01841.19 gi|91773692|ref|YP_566384.1| - 3.4e-12 46.8 0.2 5.5e-12 46.1 0.2 1.3 1 0 0 1 1 1 1 Transglutaminase-like superfamily TTR-52 PF01060.23 gi|91773694|ref|YP_566386.1| - 0.0012 19.5 0.6 1.9 9.2 0.1 2.2 1 1 1 2 2 2 2 Transthyretin-like family Peptidase_M28 PF04389.17 gi|91773696|ref|YP_566388.1| - 1.2e-25 90.3 0.0 1.8e-25 89.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M20 PF01546.28 gi|91773696|ref|YP_566388.1| - 0.081 12.6 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Peptidase family M20/M25/M40 Gram_pos_anchor PF00746.21 gi|91773696|ref|YP_566388.1| - 0.1 12.6 0.3 0.23 11.5 0.3 1.6 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Peptidase_M24 PF00557.24 gi|91773697|ref|YP_566389.1| - 0.013 15.2 0.1 0.29 10.8 0.0 2.1 2 0 0 2 2 2 0 Metallopeptidase family M24 DUF1947 PF09183.10 gi|91773697|ref|YP_566389.1| - 0.067 13.5 0.7 0.2 12.0 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) Pyrophosphatase PF00719.19 gi|91773699|ref|YP_566391.1| - 2.7e-08 33.8 0.1 3.4e-08 33.5 0.1 1.1 1 0 0 1 1 1 1 Inorganic pyrophosphatase IMD PF08397.11 gi|91773700|ref|YP_566392.1| - 0.00028 20.4 8.6 0.025 14.0 1.2 2.2 2 0 0 2 2 2 2 IRSp53/MIM homology domain cobW PF02492.19 gi|91773701|ref|YP_566393.1| - 4.5e-39 133.9 1.2 6.9e-39 133.2 1.2 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|91773701|ref|YP_566393.1| - 0.0005 19.1 3.3 0.013 14.5 0.2 2.4 2 1 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|91773701|ref|YP_566393.1| - 0.00081 19.1 0.6 0.0021 17.7 0.6 1.7 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain CbiA PF01656.23 gi|91773701|ref|YP_566393.1| - 0.019 15.0 0.7 0.019 15.0 0.7 2.0 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain ATP_bind_1 PF03029.17 gi|91773701|ref|YP_566393.1| - 0.029 14.2 2.8 1 9.1 0.1 2.6 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein MobB PF03205.14 gi|91773701|ref|YP_566393.1| - 0.029 14.3 0.4 0.07 13.0 0.4 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Glyco_trans_4_2 PF13477.6 gi|91773701|ref|YP_566393.1| - 0.11 12.6 0.0 1.1 9.3 0.0 2.4 2 1 0 2 2 2 0 Glycosyl transferase 4-like Zeta_toxin PF06414.12 gi|91773701|ref|YP_566393.1| - 0.14 11.4 0.2 0.45 9.8 0.2 1.8 1 0 0 1 1 1 0 Zeta toxin DUF1611 PF07755.11 gi|91773701|ref|YP_566393.1| - 0.15 11.3 0.7 0.27 10.5 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_C) P-loop domain AAA_11 PF13086.6 gi|91773701|ref|YP_566393.1| - 3.5 7.4 7.5 7.1 6.3 0.1 2.9 2 1 1 3 3 3 0 AAA domain Meth_synt_2 PF01717.18 gi|91773702|ref|YP_566394.1| - 0.0011 18.3 0.1 1.9 7.7 0.0 2.8 2 1 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain ATPase PF06745.13 gi|91773703|ref|YP_566395.1| - 1.7e-46 158.4 0.1 3.5e-46 157.4 0.1 1.4 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|91773703|ref|YP_566395.1| - 1.9e-07 30.8 0.0 0.0012 18.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain DnaB_C PF03796.15 gi|91773703|ref|YP_566395.1| - 2.8e-05 23.6 0.0 4.9e-05 22.8 0.0 1.3 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_24 PF13479.6 gi|91773703|ref|YP_566395.1| - 0.0035 17.1 0.3 0.64 9.7 0.3 2.7 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|91773703|ref|YP_566395.1| - 0.0084 16.4 0.1 0.053 13.8 0.1 2.0 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|91773703|ref|YP_566395.1| - 0.047 12.9 0.3 3.5 6.8 0.1 2.0 2 0 0 2 2 2 0 Rad51 IstB_IS21 PF01695.17 gi|91773703|ref|YP_566395.1| - 0.066 12.9 0.0 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_14 PF13173.6 gi|91773703|ref|YP_566395.1| - 0.067 13.2 0.0 0.12 12.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|91773703|ref|YP_566395.1| - 0.14 12.6 0.6 0.32 11.4 0.6 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) GH131_N PF18271.1 gi|91773704|ref|YP_566396.1| - 0.1 12.2 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Glycoside hydrolase 131 catalytic N-terminal domain GTP_EFTU_D2 PF03144.25 gi|91773705|ref|YP_566397.1| - 2.4e-07 31.0 0.2 2.6e-06 27.7 0.1 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU PF00009.27 gi|91773705|ref|YP_566397.1| - 2.2e-05 24.1 0.1 0.0052 16.3 0.0 2.3 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain PduV-EutP PF10662.9 gi|91773705|ref|YP_566397.1| - 0.0091 15.7 0.5 0.033 13.9 0.2 2.0 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation AAA_28 PF13521.6 gi|91773705|ref|YP_566397.1| - 0.012 15.8 0.3 0.022 15.0 0.3 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|91773705|ref|YP_566397.1| - 0.015 15.0 0.7 0.026 14.2 0.7 1.4 1 0 0 1 1 1 0 AAA domain Arf PF00025.21 gi|91773705|ref|YP_566397.1| - 0.048 13.1 0.2 1.2 8.5 0.1 2.3 2 0 0 2 2 2 0 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 gi|91773705|ref|YP_566397.1| - 0.076 13.0 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain AAA_18 PF13238.6 gi|91773705|ref|YP_566397.1| - 0.14 12.7 0.1 0.27 11.8 0.1 1.5 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 gi|91773705|ref|YP_566397.1| - 0.18 11.3 0.8 0.37 10.2 0.2 1.9 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Roc PF08477.13 gi|91773705|ref|YP_566397.1| - 0.18 12.0 0.2 0.42 10.8 0.2 1.6 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Lig_C PF18330.1 gi|91773706|ref|YP_566398.1| - 3.1e-41 140.3 0.0 5.2e-41 139.6 0.0 1.4 1 0 0 1 1 1 1 Ligase Pab1020 C-terminal region RNA_ligase PF09414.10 gi|91773706|ref|YP_566398.1| - 2.8e-15 57.0 0.0 4.4e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 RNA ligase DNA_ligase_A_M PF01068.21 gi|91773706|ref|YP_566398.1| - 2.4e-07 30.6 0.0 1.7e-05 24.5 0.0 2.3 1 1 0 1 1 1 1 ATP dependent DNA ligase domain ZnuA PF01297.17 gi|91773706|ref|YP_566398.1| - 0.094 12.1 0.0 6 6.2 0.0 2.1 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic CBS PF00571.28 gi|91773707|ref|YP_566399.1| - 2.3e-40 136.9 13.2 1.5e-13 51.0 0.4 4.1 4 0 0 4 4 4 4 CBS domain CBS PF00571.28 gi|91773708|ref|YP_566400.1| - 8.8e-44 147.8 20.3 8.9e-13 48.5 0.8 4.1 4 0 0 4 4 4 4 CBS domain PduV-EutP PF10662.9 gi|91773708|ref|YP_566400.1| - 0.037 13.8 1.5 3.8 7.3 0.0 3.1 2 1 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation GCV_T_C PF08669.11 gi|91773708|ref|YP_566400.1| - 0.045 13.7 0.2 22 5.0 0.0 3.6 4 0 0 4 4 4 0 Glycine cleavage T-protein C-terminal barrel domain TMEM223 PF14640.6 gi|91773708|ref|YP_566400.1| - 0.18 11.9 0.1 0.78 9.9 0.0 2.0 2 1 1 3 3 3 0 Transmembrane protein 223 IF3_N PF05198.16 gi|91773708|ref|YP_566400.1| - 0.25 11.6 3.5 38 4.7 0.0 4.0 4 0 0 4 4 4 0 Translation initiation factor IF-3, N-terminal domain CBS PF00571.28 gi|91773709|ref|YP_566401.1| - 2.7e-52 175.0 2.5 1.2e-13 51.3 0.0 4.1 4 0 0 4 4 4 4 CBS domain CBS PF00571.28 gi|91773710|ref|YP_566402.1| - 7.5e-47 157.6 9.3 4.7e-13 49.4 0.4 4.1 4 0 0 4 4 4 4 CBS domain PRC PF05239.16 gi|91773710|ref|YP_566402.1| - 0.022 14.8 0.7 3.9 7.6 0.0 3.4 3 0 0 3 3 3 0 PRC-barrel domain CBS PF00571.28 gi|91773711|ref|YP_566403.1| - 1.2e-19 70.5 6.9 4.4e-11 43.1 0.2 2.5 2 0 0 2 2 2 2 CBS domain DeoRC PF00455.22 gi|91773711|ref|YP_566403.1| - 0.0045 16.9 0.7 0.0093 15.9 0.7 1.5 1 0 0 1 1 1 1 DeoR C terminal sensor domain tRNA_anti-codon PF01336.25 gi|91773712|ref|YP_566404.1| - 9e-22 76.9 5.6 2.9e-08 33.6 0.7 3.4 3 0 0 3 3 3 3 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 gi|91773712|ref|YP_566404.1| - 1.5e-15 57.5 1.8 4.7e-06 26.5 0.1 3.1 3 0 0 3 3 3 3 Cell division control protein 24, OB domain 3 REPA_OB_2 PF16900.5 gi|91773712|ref|YP_566404.1| - 3.3e-07 30.1 3.0 0.12 12.3 0.3 3.4 3 0 0 3 3 3 3 Replication protein A OB domain POT1PC PF16686.5 gi|91773712|ref|YP_566404.1| - 0.004 17.0 0.1 2.5 8.0 0.0 2.6 3 0 0 3 3 3 2 ssDNA-binding domain of telomere protection protein Rep_fac-A_C PF08646.10 gi|91773712|ref|YP_566404.1| - 0.0043 16.8 0.1 5.3 6.8 0.0 3.1 3 0 0 3 3 3 2 Replication factor-A C terminal domain DUF5088 PF17008.5 gi|91773712|ref|YP_566404.1| - 0.0087 15.8 0.0 5.5 6.7 0.0 2.6 2 0 0 2 2 2 2 Domain of unknown function (DUF5088) DUF3127 PF11325.8 gi|91773712|ref|YP_566404.1| - 0.041 14.1 0.3 0.64 10.3 0.1 3.1 3 1 0 3 3 3 0 Domain of unknown function (DUF3127) DUF2889 PF11136.8 gi|91773712|ref|YP_566404.1| - 0.17 12.2 0.2 7.8 6.9 0.1 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2889) PTS_2-RNA PF01885.16 gi|91773713|ref|YP_566405.1| - 2.1e-27 96.3 0.0 2.5e-27 96.1 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family RTC PF01137.21 gi|91773714|ref|YP_566406.1| - 1.5e-81 272.8 0.0 1.8e-81 272.6 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|91773714|ref|YP_566406.1| - 7.6e-14 52.1 0.0 1.5e-13 51.1 0.0 1.5 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain Pyr_redox_2 PF07992.14 gi|91773715|ref|YP_566407.1| - 8.9e-51 172.9 1.9 1.1e-50 172.6 1.4 1.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|91773715|ref|YP_566407.1| - 3.3e-19 69.2 3.6 5.7e-17 62.0 0.8 3.2 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|91773715|ref|YP_566407.1| - 3.2e-14 52.9 0.1 1.6e-08 34.2 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|91773715|ref|YP_566407.1| - 7.4e-14 51.9 0.3 2e-13 50.5 0.0 1.8 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HI0933_like PF03486.14 gi|91773715|ref|YP_566407.1| - 1.6e-07 30.4 4.4 0.02 13.6 0.1 3.5 4 0 0 4 4 4 2 HI0933-like protein Lycopene_cycl PF05834.12 gi|91773715|ref|YP_566407.1| - 3.3e-07 29.7 5.0 0.0052 15.9 0.1 3.1 2 1 1 3 3 3 2 Lycopene cyclase protein K_oxygenase PF13434.6 gi|91773715|ref|YP_566407.1| - 4.9e-07 29.2 0.0 0.00013 21.2 0.0 2.2 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 gi|91773715|ref|YP_566407.1| - 1.1e-06 28.6 13.1 0.0017 18.0 0.8 3.7 3 1 0 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|91773715|ref|YP_566407.1| - 3.1e-06 27.3 4.2 0.0061 16.8 0.2 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|91773715|ref|YP_566407.1| - 5e-06 25.9 9.3 0.00017 20.8 0.1 2.8 3 0 0 3 3 3 2 FAD binding domain Thi4 PF01946.17 gi|91773715|ref|YP_566407.1| - 1e-05 24.9 1.6 0.0094 15.2 0.0 2.7 2 0 0 2 2 2 2 Thi4 family ApbA PF02558.16 gi|91773715|ref|YP_566407.1| - 1.9e-05 24.3 0.2 0.0015 18.2 0.1 2.5 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA GIDA PF01134.22 gi|91773715|ref|YP_566407.1| - 0.00071 18.8 10.6 0.048 12.7 2.8 3.3 2 1 1 3 3 3 2 Glucose inhibited division protein A NAD_binding_9 PF13454.6 gi|91773715|ref|YP_566407.1| - 0.00086 19.3 4.4 1.2 9.1 0.0 3.4 2 1 1 3 3 3 2 FAD-NAD(P)-binding 3HCDH_N PF02737.18 gi|91773715|ref|YP_566407.1| - 0.0014 18.5 3.0 0.0021 18.0 0.6 2.3 2 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 gi|91773715|ref|YP_566407.1| - 0.0022 17.3 3.3 0.16 11.2 1.1 2.3 2 0 0 2 2 2 2 FAD binding domain NAD_binding_7 PF13241.6 gi|91773715|ref|YP_566407.1| - 0.0024 18.3 0.2 3.7 8.1 0.1 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding TrkA_N PF02254.18 gi|91773715|ref|YP_566407.1| - 0.0045 17.2 0.5 0.5 10.7 0.1 2.6 2 0 0 2 2 2 1 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|91773715|ref|YP_566407.1| - 0.0046 16.3 0.2 0.073 12.4 0.1 2.1 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|91773715|ref|YP_566407.1| - 0.029 14.6 1.5 7.8 6.8 0.1 3.0 3 0 0 3 3 3 0 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 gi|91773715|ref|YP_566407.1| - 0.033 14.3 2.1 0.066 13.3 0.3 2.4 3 1 0 3 3 2 0 Shikimate / quinate 5-dehydrogenase ThiF PF00899.21 gi|91773715|ref|YP_566407.1| - 0.054 12.9 0.2 0.1 12.0 0.2 1.4 1 0 0 1 1 1 0 ThiF family F420_oxidored PF03807.17 gi|91773715|ref|YP_566407.1| - 0.096 13.3 2.8 1 10.0 0.3 3.0 3 0 0 3 3 2 0 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.23 gi|91773715|ref|YP_566407.1| - 0.1 12.6 0.2 2.1 8.3 0.0 2.3 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Trp_halogenase PF04820.14 gi|91773715|ref|YP_566407.1| - 0.21 10.4 3.5 0.63 8.8 0.0 2.6 3 0 0 3 3 3 0 Tryptophan halogenase FAD_oxidored PF12831.7 gi|91773715|ref|YP_566407.1| - 0.25 10.6 9.7 1.1 8.5 0.3 3.0 3 0 0 3 3 3 0 FAD dependent oxidoreductase Malic_M PF03949.15 gi|91773715|ref|YP_566407.1| - 1.1 8.5 5.5 0.21 10.8 1.9 1.6 2 0 0 2 2 2 0 Malic enzyme, NAD binding domain Toprim_4 PF13662.6 gi|91773717|ref|YP_566409.1| - 1.1e-12 48.2 0.2 3.6e-12 46.6 0.2 2.0 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|91773717|ref|YP_566409.1| - 2.6e-06 27.8 0.0 6.6e-06 26.5 0.0 1.7 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|91773717|ref|YP_566409.1| - 0.006 16.8 0.1 0.025 14.8 0.1 2.1 1 1 0 1 1 1 1 Toprim domain DUF5499 PF17603.2 gi|91773717|ref|YP_566409.1| - 0.11 13.2 0.0 6.5 7.4 0.0 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5499) DUF1388 PF07142.12 gi|91773717|ref|YP_566409.1| - 5.4 7.1 13.1 2 8.5 7.5 2.7 2 0 0 2 2 2 0 Repeat of unknown function (DUF1388) Acetyltransf_1 PF00583.25 gi|91773718|ref|YP_566410.1| - 2.1e-16 60.2 0.0 2.8e-16 59.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|91773718|ref|YP_566410.1| - 2.3e-14 53.4 0.1 2.8e-14 53.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|91773718|ref|YP_566410.1| - 9.2e-11 42.0 0.0 1.5e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|91773718|ref|YP_566410.1| - 5.8e-07 29.4 0.0 1e-06 28.6 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|91773718|ref|YP_566410.1| - 0.00036 20.7 0.4 0.00052 20.2 0.4 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|91773718|ref|YP_566410.1| - 0.0017 19.0 0.1 0.0035 18.0 0.1 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|91773718|ref|YP_566410.1| - 0.0078 16.3 0.0 0.036 14.1 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|91773718|ref|YP_566410.1| - 0.037 13.7 0.0 0.18 11.5 0.0 1.9 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|91773718|ref|YP_566410.1| - 0.062 12.8 0.1 0.13 11.7 0.1 1.5 1 1 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_CG PF14542.6 gi|91773718|ref|YP_566410.1| - 0.087 13.0 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DUF5591 PF17884.1 gi|91773719|ref|YP_566411.1| - 2.1e-61 206.3 0.7 4e-61 205.4 0.7 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) TGT_C2 PF14810.6 gi|91773719|ref|YP_566411.1| - 1.9e-18 66.4 0.0 2.3e-17 62.9 0.0 2.4 2 0 0 2 2 2 1 Patch-forming domain C2 of tRNA-guanine transglycosylase TGT PF01702.18 gi|91773719|ref|YP_566411.1| - 8.2e-14 51.5 0.1 3.4e-13 49.5 0.0 1.9 2 0 0 2 2 2 1 Queuine tRNA-ribosyltransferase PUA PF01472.20 gi|91773719|ref|YP_566411.1| - 2.4e-13 49.8 0.1 5.6e-13 48.7 0.1 1.6 1 0 0 1 1 1 1 PUA domain FAD-oxidase_C PF02913.19 gi|91773720|ref|YP_566412.1| - 9e-60 202.4 0.1 1.2e-59 202.0 0.1 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|91773720|ref|YP_566412.1| - 4.3e-43 146.4 0.4 9.5e-43 145.3 0.1 1.7 2 0 0 2 2 2 1 FAD binding domain CCG PF02754.16 gi|91773721|ref|YP_566413.1| - 1.4e-28 98.9 9.4 3.6e-15 55.9 0.1 2.7 3 0 0 3 3 3 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|91773721|ref|YP_566413.1| - 5.5e-12 45.9 3.7 5.5e-12 45.9 3.7 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91773721|ref|YP_566413.1| - 1.8e-09 38.0 4.9 1.8e-09 38.0 4.9 2.7 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773721|ref|YP_566413.1| - 3.5e-08 33.9 5.5 3.5e-08 33.9 5.5 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91773721|ref|YP_566413.1| - 1.4e-05 24.7 20.8 0.0012 18.6 2.9 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91773721|ref|YP_566413.1| - 2.1e-05 24.6 22.8 0.00037 20.5 13.1 3.3 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773721|ref|YP_566413.1| - 0.00016 21.6 17.4 0.0029 17.6 2.6 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|91773721|ref|YP_566413.1| - 0.00084 19.7 1.2 0.00084 19.7 1.2 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773721|ref|YP_566413.1| - 0.0013 18.9 12.4 0.0013 18.9 12.4 3.5 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91773721|ref|YP_566413.1| - 0.0017 18.6 3.2 0.53 10.5 0.1 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91773721|ref|YP_566413.1| - 0.0047 17.8 15.5 0.013 16.4 12.8 2.9 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|91773721|ref|YP_566413.1| - 0.0052 16.9 15.4 0.11 12.6 1.0 3.8 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|91773721|ref|YP_566413.1| - 0.033 14.7 12.2 0.34 11.5 0.6 2.9 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|91773721|ref|YP_566413.1| - 2.6 8.9 8.1 2.9 8.7 0.7 2.7 1 1 1 2 2 2 0 4Fe-4S single cluster domain Thioredoxin PF00085.20 gi|91773721|ref|YP_566413.1| - 3.8 7.5 5.0 12 5.9 0.1 2.9 2 1 0 3 3 3 0 Thioredoxin Response_reg PF00072.24 gi|91773722|ref|YP_566414.1| - 1.8e-22 79.6 0.2 3.9e-22 78.5 0.2 1.6 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 gi|91773722|ref|YP_566414.1| - 7.6e-19 68.3 0.0 1.9e-18 67.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91773722|ref|YP_566414.1| - 4.6e-16 58.6 0.5 1.7e-15 56.8 0.5 2.0 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 gi|91773722|ref|YP_566414.1| - 6.9e-09 35.7 0.0 1.9e-08 34.3 0.0 1.8 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|91773722|ref|YP_566414.1| - 2.1e-08 34.3 0.2 7.2e-08 32.6 0.2 1.9 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|91773722|ref|YP_566414.1| - 6.8e-07 29.5 0.0 1.4e-06 28.5 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.12 gi|91773722|ref|YP_566414.1| - 0.00064 20.0 0.1 0.0018 18.5 0.0 1.8 2 0 0 2 2 1 1 PAS fold PAS_12 PF18095.1 gi|91773722|ref|YP_566414.1| - 0.001 18.7 0.1 0.0024 17.5 0.1 1.6 1 0 0 1 1 1 1 UPF0242 C-terminal PAS-like domain PAS_8 PF13188.7 gi|91773722|ref|YP_566414.1| - 0.0041 17.1 0.0 0.011 15.7 0.0 1.7 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 gi|91773722|ref|YP_566414.1| - 0.014 15.3 0.0 0.031 14.1 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.6 gi|91773722|ref|YP_566414.1| - 0.027 14.6 0.0 0.065 13.4 0.0 1.6 1 0 0 1 1 1 0 PAS domain LMBR1 PF04791.16 gi|91773722|ref|YP_566414.1| - 0.032 13.1 2.6 0.038 12.9 2.6 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Glyco_transf_15 PF01793.16 gi|91773722|ref|YP_566414.1| - 0.054 12.7 2.8 0.056 12.7 1.0 1.8 2 0 0 2 2 2 0 Glycolipid 2-alpha-mannosyltransferase PBECR5 PF18814.1 gi|91773722|ref|YP_566414.1| - 0.1 12.5 5.5 3.3 7.6 0.3 2.2 2 0 0 2 2 2 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5 Radical_SAM_N PF08497.10 gi|91773723|ref|YP_566415.1| - 1.1e-127 425.4 0.0 1.5e-127 424.9 0.0 1.2 1 0 0 1 1 1 1 Radical SAM N-terminal DUF3362 PF11842.8 gi|91773723|ref|YP_566415.1| - 2.8e-28 99.1 0.0 4.8e-28 98.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3362) Radical_SAM PF04055.21 gi|91773723|ref|YP_566415.1| - 7.6e-16 58.9 0.4 2.1e-15 57.5 0.3 1.8 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|91773723|ref|YP_566415.1| - 0.00014 21.8 0.0 0.2 11.7 0.0 3.0 3 0 0 3 3 3 2 B12 binding domain DUF523 PF04463.12 gi|91773723|ref|YP_566415.1| - 0.082 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF523) Lactamase_B PF00753.27 gi|91773724|ref|YP_566416.1| - 3.1e-32 112.2 0.1 3.5e-32 112.0 0.1 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|91773724|ref|YP_566416.1| - 9.6e-09 35.0 0.2 1.3e-08 34.6 0.2 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|91773724|ref|YP_566416.1| - 1.4e-05 25.0 0.1 2.4e-05 24.3 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|91773724|ref|YP_566416.1| - 0.00024 20.6 0.1 0.00047 19.6 0.1 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain TatD_DNase PF01026.21 gi|91773725|ref|YP_566417.1| - 1.3e-69 234.5 0.2 1.5e-69 234.3 0.2 1.0 1 0 0 1 1 1 1 TatD related DNase PXA PF02194.15 gi|91773725|ref|YP_566417.1| - 0.12 12.4 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 PXA domain RPW8 PF05659.11 gi|91773727|ref|YP_566419.1| - 0.018 14.7 1.3 0.021 14.5 1.3 1.2 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Rabaptin PF03528.15 gi|91773727|ref|YP_566419.1| - 0.041 12.6 1.1 0.048 12.4 1.1 1.0 1 0 0 1 1 1 0 Rabaptin NitrOD1 PF18549.1 gi|91773727|ref|YP_566419.1| - 0.16 11.9 2.5 0.91 9.5 2.3 2.0 1 1 1 2 2 2 0 Nitrosopumilus output domain 1 HMGL-like PF00682.19 gi|91773728|ref|YP_566420.1| - 2.1e-62 211.1 5.1 4e-62 210.2 5.1 1.5 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|91773728|ref|YP_566420.1| - 4.9e-32 110.6 1.5 1e-31 109.6 1.5 1.6 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain DUF5541 PF17695.1 gi|91773728|ref|YP_566420.1| - 0.049 14.1 0.0 0.75 10.2 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5541) UbiA PF01040.18 gi|91773729|ref|YP_566421.1| - 7.1e-31 107.4 11.3 9e-31 107.1 11.3 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF21 PF01595.20 gi|91773729|ref|YP_566421.1| - 2.2 8.0 15.9 2.5 7.8 3.7 3.3 1 1 1 2 2 2 0 Cyclin M transmembrane N-terminal domain Pyr_redox_2 PF07992.14 gi|91773730|ref|YP_566422.1| - 1.9e-46 158.7 0.0 2.6e-46 158.2 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|91773730|ref|YP_566422.1| - 1.7e-18 66.9 0.0 3.6e-18 65.8 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|91773730|ref|YP_566422.1| - 1.9e-15 57.2 0.0 4.9e-15 55.8 0.0 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|91773730|ref|YP_566422.1| - 1.8e-10 40.6 0.0 2.7e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|91773730|ref|YP_566422.1| - 5.2e-06 25.8 0.0 0.022 13.9 0.0 2.8 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) 3HCDH_N PF02737.18 gi|91773730|ref|YP_566422.1| - 0.017 15.0 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|91773730|ref|YP_566422.1| - 0.026 13.9 0.0 0.044 13.2 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thi4 PF01946.17 gi|91773730|ref|YP_566422.1| - 0.066 12.5 0.0 0.14 11.4 0.0 1.6 1 0 0 1 1 1 0 Thi4 family NAD_binding_7 PF13241.6 gi|91773730|ref|YP_566422.1| - 0.066 13.7 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding ApbA PF02558.16 gi|91773730|ref|YP_566422.1| - 0.14 11.8 0.0 3.6 7.2 0.0 2.3 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Glt_symporter PF03616.14 gi|91773731|ref|YP_566423.1| - 1.1e-12 47.4 17.0 5.8e-11 41.7 10.4 2.4 2 1 0 2 2 2 2 Sodium/glutamate symporter CoxIIa PF08113.11 gi|91773731|ref|YP_566423.1| - 1.4 8.8 7.6 0.71 9.7 2.1 3.2 2 0 0 2 2 2 0 Cytochrome c oxidase subunit IIa family NAC PF01849.18 gi|91773732|ref|YP_566424.1| - 6.3e-18 64.5 2.2 8.5e-18 64.1 2.2 1.2 1 0 0 1 1 1 1 NAC domain UBA_4 PF14555.6 gi|91773732|ref|YP_566424.1| - 0.0066 16.2 0.1 0.012 15.4 0.1 1.4 1 0 0 1 1 1 1 UBA-like domain HTH_10 PF04967.12 gi|91773732|ref|YP_566424.1| - 0.046 13.5 0.1 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 HTH DNA binding domain E3_binding PF02817.17 gi|91773732|ref|YP_566424.1| - 0.13 12.6 0.0 2.9 8.3 0.0 2.8 3 0 0 3 3 3 0 e3 binding domain Fe-S_biosyn PF01521.20 gi|91773733|ref|YP_566425.1| - 8.1e-15 55.0 0.1 9.6e-15 54.7 0.1 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis ATPase PF06745.13 gi|91773735|ref|YP_566427.1| - 9.2e-30 103.7 0.1 1.2e-29 103.4 0.1 1.1 1 0 0 1 1 1 1 KaiC PAXNEB PF05625.11 gi|91773735|ref|YP_566427.1| - 0.00021 20.6 0.0 0.0063 15.7 0.0 2.0 1 1 1 2 2 2 2 PAXNEB protein DUF3201 PF11447.8 gi|91773735|ref|YP_566427.1| - 0.045 13.3 0.1 0.082 12.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3201) PRA-CH PF01502.18 gi|91773736|ref|YP_566428.1| - 2e-36 123.6 0.5 2.6e-36 123.3 0.5 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase DUF5514 PF17633.2 gi|91773736|ref|YP_566428.1| - 0.077 13.2 0.1 0.14 12.4 0.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5514) T2SSE PF00437.20 gi|91773737|ref|YP_566429.1| - 2e-12 46.8 0.2 3.1e-12 46.1 0.2 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein PIN PF01850.21 gi|91773737|ref|YP_566429.1| - 8e-06 26.4 0.0 2.5e-05 24.8 0.0 1.9 2 0 0 2 2 2 1 PIN domain KH_1 PF00013.29 gi|91773737|ref|YP_566429.1| - 2e-05 24.3 0.3 7e-05 22.6 0.3 2.0 1 0 0 1 1 1 1 KH domain ATPase PF06745.13 gi|91773737|ref|YP_566429.1| - 0.03 13.7 0.2 0.12 11.7 0.0 2.1 2 0 0 2 2 2 0 KaiC KH_4 PF13083.6 gi|91773737|ref|YP_566429.1| - 0.039 13.8 0.6 0.13 12.2 0.6 1.9 1 0 0 1 1 1 0 KH domain AAA_16 PF13191.6 gi|91773737|ref|YP_566429.1| - 0.042 14.2 0.0 0.17 12.2 0.0 2.1 2 1 0 2 2 2 0 AAA ATPase domain PIN_3 PF13470.6 gi|91773737|ref|YP_566429.1| - 0.052 14.3 0.0 0.16 12.7 0.0 2.0 1 1 0 1 1 1 0 PIN domain AAA_29 PF13555.6 gi|91773737|ref|YP_566429.1| - 0.094 12.5 0.0 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|91773737|ref|YP_566429.1| - 0.13 12.8 0.0 0.53 10.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|91773737|ref|YP_566429.1| - 0.17 12.0 0.0 0.57 10.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain PDGLE PF13190.6 gi|91773738|ref|YP_566430.1| - 3.2e-18 65.4 0.2 4e-18 65.1 0.2 1.1 1 0 0 1 1 1 1 PDGLE domain OppC_N PF12911.7 gi|91773738|ref|YP_566430.1| - 0.014 15.3 0.0 0.014 15.3 0.0 1.5 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CbiM PF01891.16 gi|91773739|ref|YP_566431.1| - 8.8e-54 182.5 21.0 9.9e-54 182.3 21.0 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region Na_Ca_ex PF01699.24 gi|91773739|ref|YP_566431.1| - 0.0097 15.9 5.4 0.0097 15.9 5.4 2.4 1 1 1 2 2 2 1 Sodium/calcium exchanger protein Peptidase_A24 PF01478.18 gi|91773739|ref|YP_566431.1| - 0.35 11.3 13.8 0.043 14.2 6.3 2.6 1 1 1 2 2 2 0 Type IV leader peptidase family ABC_tran PF00005.27 gi|91773740|ref|YP_566432.1| - 4.1e-33 114.8 0.0 6e-33 114.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773740|ref|YP_566432.1| - 2.2e-15 57.3 0.8 1.2e-09 38.4 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|91773740|ref|YP_566432.1| - 9.1e-12 44.9 0.0 1.5e-11 44.2 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|91773740|ref|YP_566432.1| - 0.00075 19.2 0.2 0.0019 17.9 0.2 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|91773740|ref|YP_566432.1| - 0.0026 18.3 0.0 0.0035 17.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 gi|91773740|ref|YP_566432.1| - 0.011 15.9 0.0 0.19 12.0 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 gi|91773740|ref|YP_566432.1| - 0.013 15.5 0.3 0.024 14.7 0.3 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_28 PF13521.6 gi|91773740|ref|YP_566432.1| - 0.032 14.5 0.1 0.056 13.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|91773740|ref|YP_566432.1| - 0.035 13.5 0.0 0.061 12.7 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 gi|91773740|ref|YP_566432.1| - 0.054 14.0 0.3 0.3 11.6 0.2 2.2 2 1 1 3 3 3 0 AAA domain RsgA_GTPase PF03193.16 gi|91773740|ref|YP_566432.1| - 0.058 13.3 0.3 0.14 12.1 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase AAA_15 PF13175.6 gi|91773740|ref|YP_566432.1| - 0.06 13.1 0.1 0.26 10.9 0.2 1.8 2 0 0 2 2 2 0 AAA ATPase domain G-alpha PF00503.20 gi|91773740|ref|YP_566432.1| - 0.072 12.2 0.0 0.072 12.2 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_33 PF13671.6 gi|91773740|ref|YP_566432.1| - 0.099 12.8 0.0 0.22 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain CbiQ PF02361.16 gi|91773741|ref|YP_566433.1| - 6.5e-35 120.7 8.9 9e-35 120.3 8.9 1.2 1 0 0 1 1 1 1 Cobalt transport protein UDPG_MGDP_dh_N PF03721.14 gi|91773742|ref|YP_566434.1| - 7.2e-63 211.5 0.2 1e-62 211.0 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|91773742|ref|YP_566434.1| - 6.3e-38 128.9 0.0 1.2e-37 128.0 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|91773742|ref|YP_566434.1| - 6.7e-31 106.8 0.0 6e-30 103.8 0.0 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.17 gi|91773742|ref|YP_566434.1| - 6e-05 23.6 0.0 0.2 12.3 0.0 3.3 3 1 0 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|91773742|ref|YP_566434.1| - 6.3e-05 22.9 0.0 0.00019 21.4 0.0 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|91773742|ref|YP_566434.1| - 6.9e-05 22.9 0.0 0.00016 21.7 0.0 1.8 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DpaA_N PF16924.5 gi|91773742|ref|YP_566434.1| - 0.00049 20.2 0.3 0.019 15.1 0.0 3.2 3 1 1 4 4 4 1 Dipicolinate synthase subunit A N-terminal domain Pyr_redox PF00070.27 gi|91773742|ref|YP_566434.1| - 0.0006 20.3 0.0 0.002 18.6 0.0 1.9 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_2 PF03446.15 gi|91773742|ref|YP_566434.1| - 0.0016 18.6 0.1 0.45 10.7 0.0 2.7 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase GFO_IDH_MocA PF01408.22 gi|91773742|ref|YP_566434.1| - 0.0018 19.1 0.0 0.01 16.7 0.0 2.2 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 gi|91773742|ref|YP_566434.1| - 0.0082 15.5 0.3 0.5 9.7 0.0 2.7 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.16 gi|91773742|ref|YP_566434.1| - 0.014 15.0 0.1 0.033 13.8 0.1 1.7 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 gi|91773742|ref|YP_566434.1| - 0.014 14.6 0.0 0.026 13.7 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|91773742|ref|YP_566434.1| - 0.015 14.6 0.0 0.032 13.5 0.0 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Rossmann-like PF10727.9 gi|91773742|ref|YP_566434.1| - 0.12 12.3 0.1 0.33 10.8 0.0 1.8 2 0 0 2 2 2 0 Rossmann-like domain NAD_binding_11 PF14833.6 gi|91773742|ref|YP_566434.1| - 0.14 12.4 0.0 0.41 10.9 0.0 1.9 1 1 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FAD_binding_3 PF01494.19 gi|91773742|ref|YP_566434.1| - 0.22 10.8 0.1 0.37 10.0 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain NAD_binding_8 PF13450.6 gi|91773742|ref|YP_566434.1| - 0.36 11.1 1.2 0.8 10.0 0.2 2.1 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain DUF2723 PF11028.8 gi|91773743|ref|YP_566435.1| - 0.068 13.1 4.1 0.089 12.7 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) Fun_ATP-synt_8 PF05933.13 gi|91773744|ref|YP_566436.1| - 0.06 13.5 8.0 1.2 9.3 0.5 2.3 2 0 0 2 2 2 0 Fungal ATP synthase protein 8 (A6L) GATase PF00117.28 gi|91773745|ref|YP_566437.1| - 1.6e-19 70.4 0.0 1.9e-19 70.2 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|91773745|ref|YP_566437.1| - 3e-09 37.0 0.0 2.3e-08 34.1 0.0 1.9 1 1 0 1 1 1 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|91773745|ref|YP_566437.1| - 7.8e-07 29.1 0.0 1.2e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 gi|91773745|ref|YP_566437.1| - 1.3e-06 28.1 0.1 6.5e-06 25.9 0.0 1.8 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|91773745|ref|YP_566437.1| - 0.05 13.4 0.0 0.077 12.8 0.0 1.2 1 0 0 1 1 1 0 DJ-1/PfpI family AIRS_C PF02769.22 gi|91773746|ref|YP_566438.1| - 3.4e-19 69.5 2.4 8.1e-19 68.3 2.4 1.7 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|91773746|ref|YP_566438.1| - 3.3e-07 30.9 0.4 9.2e-07 29.4 0.4 1.9 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain NfeD PF01957.18 gi|91773747|ref|YP_566439.1| - 3.2e-13 49.9 0.5 1.2e-12 48.0 0.1 2.2 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding CLP_protease PF00574.23 gi|91773747|ref|YP_566439.1| - 1e-09 38.6 0.4 1.6e-09 37.9 0.4 1.2 1 0 0 1 1 1 1 Clp protease Band_7 PF01145.25 gi|91773748|ref|YP_566440.1| - 2.4e-36 125.4 3.0 4e-36 124.7 3.0 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|91773748|ref|YP_566440.1| - 0.0005 19.8 0.5 0.0013 18.5 0.1 1.9 2 0 0 2 2 2 1 SPFH domain-Band 7 family Glyco_hydro_80 PF13647.6 gi|91773748|ref|YP_566440.1| - 0.043 13.3 0.0 0.06 12.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A DnaJ_CXXCXGXG PF00684.19 gi|91773749|ref|YP_566441.1| - 6.5e-10 39.2 11.2 6.5e-10 39.2 11.2 2.0 1 1 0 1 1 1 1 DnaJ central domain tRNA_anti-codon PF01336.25 gi|91773749|ref|YP_566441.1| - 8.3e-09 35.3 0.0 2.1e-08 34.0 0.0 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DHH PF01368.20 gi|91773749|ref|YP_566441.1| - 1.9e-05 24.8 0.3 4.3e-05 23.7 0.3 1.6 1 0 0 1 1 1 1 DHH family S1 PF00575.23 gi|91773749|ref|YP_566441.1| - 0.0007 19.9 0.3 0.0007 19.9 0.3 2.0 2 0 0 2 2 2 1 S1 RNA binding domain tRNA_anti_2 PF13742.6 gi|91773749|ref|YP_566441.1| - 0.00098 19.3 0.0 0.0026 17.9 0.0 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain zf-CHY PF05495.12 gi|91773749|ref|YP_566441.1| - 0.033 14.7 1.1 0.033 14.7 1.1 2.4 2 1 1 3 3 3 0 CHY zinc finger Prok-RING_2 PF14445.6 gi|91773749|ref|YP_566441.1| - 0.37 11.0 5.1 0.26 11.5 0.3 2.7 1 1 1 2 2 2 0 Prokaryotic RING finger family 2 Anti-TRAP PF15777.5 gi|91773749|ref|YP_566441.1| - 0.64 10.0 24.7 0.17 11.9 6.7 3.4 2 2 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein HypA PF01155.19 gi|91773749|ref|YP_566441.1| - 1.4 8.9 17.8 3.8 7.6 0.8 4.2 3 1 1 4 4 4 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TackOD1 PF18551.1 gi|91773749|ref|YP_566441.1| - 4.3 7.0 13.0 0.8 9.3 1.0 2.9 1 1 0 1 1 1 0 Thaumarchaeal output domain 1 Pribosyltran PF00156.27 gi|91773750|ref|YP_566442.1| - 2.1e-20 72.9 0.4 3.3e-20 72.2 0.4 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|91773750|ref|YP_566442.1| - 0.00013 22.0 1.7 0.00041 20.4 1.4 1.9 1 1 1 2 2 2 1 Phosphoribosyl synthetase-associated domain HTH_7 PF02796.15 gi|91773750|ref|YP_566442.1| - 0.0021 18.1 0.1 0.013 15.6 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase PRTase_2 PF15609.6 gi|91773750|ref|YP_566442.1| - 0.0043 16.6 0.4 0.012 15.1 0.3 1.7 1 1 1 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.6 gi|91773750|ref|YP_566442.1| - 0.005 16.3 0.0 0.0065 15.9 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase GerE PF00196.19 gi|91773750|ref|YP_566442.1| - 0.0077 15.8 0.0 0.057 13.0 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_11 PF08279.12 gi|91773750|ref|YP_566442.1| - 0.051 13.5 0.1 0.14 12.1 0.1 1.7 1 0 0 1 1 1 0 HTH domain Fe_dep_repress PF01325.19 gi|91773750|ref|YP_566442.1| - 0.11 12.7 0.3 0.95 9.7 0.0 2.5 3 0 0 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain HTH_23 PF13384.6 gi|91773750|ref|YP_566442.1| - 0.11 12.3 0.0 2.8 7.9 0.0 2.4 2 0 0 2 2 2 0 Homeodomain-like domain DUF1335 PF07056.11 gi|91773750|ref|YP_566442.1| - 0.11 12.6 0.2 0.87 9.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1335) HTH_Crp_2 PF13545.6 gi|91773750|ref|YP_566442.1| - 0.14 12.1 0.0 0.5 10.4 0.0 1.9 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 gi|91773750|ref|YP_566442.1| - 0.14 11.7 0.0 0.33 10.5 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 PIN_6 PF17146.4 gi|91773751|ref|YP_566443.1| - 2.3e-11 44.0 0.1 4e-11 43.3 0.1 1.4 1 0 0 1 1 1 1 PIN domain of ribonuclease Prok-RING_1 PF14446.6 gi|91773751|ref|YP_566443.1| - 0.0049 16.8 1.5 0.0089 15.9 1.5 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 zinc-ribbons_6 PF07191.12 gi|91773751|ref|YP_566443.1| - 0.0078 16.2 0.6 0.014 15.4 0.2 1.6 2 0 0 2 2 2 1 zinc-ribbons PIN_4 PF13638.6 gi|91773751|ref|YP_566443.1| - 0.0081 16.5 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 PIN domain PIN_5 PF08745.11 gi|91773751|ref|YP_566443.1| - 0.016 14.6 0.7 0.13 11.6 0.1 2.1 1 1 0 2 2 2 0 PINc domain ribonuclease Fer4_11 PF13247.6 gi|91773751|ref|YP_566443.1| - 0.032 14.3 0.1 0.05 13.7 0.1 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain C6_DPF PF10170.9 gi|91773751|ref|YP_566443.1| - 0.082 13.3 0.1 0.17 12.3 0.1 1.5 1 1 0 1 1 1 0 Cysteine-rich domain Rad50_zn_hook PF04423.14 gi|91773751|ref|YP_566443.1| - 0.2 11.5 0.5 0.2 11.5 0.5 2.2 1 1 1 2 2 2 0 Rad50 zinc hook motif Zn-ribbon_8 PF09723.10 gi|91773751|ref|YP_566443.1| - 0.57 10.3 4.0 0.62 10.2 2.0 2.1 2 1 0 2 2 2 0 Zinc ribbon domain DUF2072 PF09845.9 gi|91773751|ref|YP_566443.1| - 1.3 9.3 4.1 1.1 9.5 1.7 1.9 2 0 0 2 2 2 0 Zn-ribbon containing protein ATPase PF06745.13 gi|91773752|ref|YP_566444.1| - 2.6e-79 265.8 6.6 2.9e-42 144.6 4.3 2.1 2 0 0 2 2 2 2 KaiC RecA PF00154.21 gi|91773752|ref|YP_566444.1| - 3.2e-11 43.2 3.1 4.6e-05 23.0 0.0 2.4 2 1 0 2 2 2 2 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|91773752|ref|YP_566444.1| - 4.7e-10 39.4 0.1 0.00073 19.2 0.0 3.5 3 1 1 4 4 4 2 AAA domain DnaB_C PF03796.15 gi|91773752|ref|YP_566444.1| - 1.3e-08 34.5 0.5 0.0007 19.0 0.0 2.6 2 1 0 2 2 2 2 DnaB-like helicase C terminal domain AAA_16 PF13191.6 gi|91773752|ref|YP_566444.1| - 5.3e-08 33.4 0.1 0.00024 21.5 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|91773752|ref|YP_566444.1| - 6.8e-08 32.9 0.0 0.0016 18.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain ATP-synt_ab PF00006.25 gi|91773752|ref|YP_566444.1| - 1.9e-06 27.7 0.4 0.016 14.8 0.0 2.3 2 0 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 gi|91773752|ref|YP_566444.1| - 6.9e-06 25.9 0.9 0.1 12.3 0.1 2.9 2 2 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|91773752|ref|YP_566444.1| - 8.5e-06 25.8 0.1 0.00016 21.7 0.0 2.4 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea cobW PF02492.19 gi|91773752|ref|YP_566444.1| - 1.3e-05 24.9 0.3 0.13 11.9 0.1 2.3 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain AAA_14 PF13173.6 gi|91773752|ref|YP_566444.1| - 2.1e-05 24.6 0.1 0.1 12.6 0.0 3.1 2 1 0 2 2 2 2 AAA domain GvpD PF07088.11 gi|91773752|ref|YP_566444.1| - 2.4e-05 23.2 1.2 0.59 8.7 0.0 3.9 4 0 0 4 4 4 2 GvpD gas vesicle protein T2SSE PF00437.20 gi|91773752|ref|YP_566444.1| - 2.5e-05 23.5 0.3 0.012 14.7 0.0 2.4 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA PF00004.29 gi|91773752|ref|YP_566444.1| - 2.6e-05 24.6 1.5 0.16 12.4 0.1 2.7 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 gi|91773752|ref|YP_566444.1| - 5e-05 22.7 0.9 0.024 13.9 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin DUF2075 PF09848.9 gi|91773752|ref|YP_566444.1| - 5.2e-05 22.6 0.2 0.064 12.5 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_18 PF13238.6 gi|91773752|ref|YP_566444.1| - 0.00016 22.2 2.5 0.17 12.5 0.1 2.8 2 1 0 2 2 2 2 AAA domain Rad51 PF08423.11 gi|91773752|ref|YP_566444.1| - 0.00016 21.0 1.1 0.14 11.4 0.0 2.4 2 0 0 2 2 2 2 Rad51 AAA_7 PF12775.7 gi|91773752|ref|YP_566444.1| - 0.00035 20.1 2.2 0.1 12.1 0.0 3.0 3 0 0 3 3 3 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|91773752|ref|YP_566444.1| - 0.00037 20.2 0.7 0.13 11.9 0.0 2.6 3 0 0 3 3 2 1 Sigma-54 interaction domain NACHT PF05729.12 gi|91773752|ref|YP_566444.1| - 0.00038 20.4 0.4 0.049 13.6 0.0 2.5 2 1 0 2 2 2 1 NACHT domain AAA_19 PF13245.6 gi|91773752|ref|YP_566444.1| - 0.00078 19.8 0.0 0.27 11.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|91773752|ref|YP_566444.1| - 0.00093 18.9 9.4 0.048 13.4 0.3 2.7 2 1 1 3 3 2 2 P-loop containing region of AAA domain NB-ARC PF00931.22 gi|91773752|ref|YP_566444.1| - 0.0011 18.3 0.6 0.046 12.9 0.0 2.3 2 0 0 2 2 2 1 NB-ARC domain ResIII PF04851.15 gi|91773752|ref|YP_566444.1| - 0.0015 18.5 0.1 0.13 12.2 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_33 PF13671.6 gi|91773752|ref|YP_566444.1| - 0.0024 18.0 0.2 0.36 11.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|91773752|ref|YP_566444.1| - 0.0031 17.3 0.7 0.71 9.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain MobB PF03205.14 gi|91773752|ref|YP_566444.1| - 0.0037 17.1 0.1 1.1 9.2 0.0 2.7 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B PhoH PF02562.16 gi|91773752|ref|YP_566444.1| - 0.0039 16.7 0.7 0.023 14.2 0.0 2.2 2 0 0 2 2 2 1 PhoH-like protein ABC_tran PF00005.27 gi|91773752|ref|YP_566444.1| - 0.005 17.4 4.0 1.3 9.5 0.0 2.6 2 1 0 2 2 2 1 ABC transporter IstB_IS21 PF01695.17 gi|91773752|ref|YP_566444.1| - 0.0062 16.3 0.1 1.5 8.5 0.0 2.4 2 0 0 2 2 2 1 IstB-like ATP binding protein CbiA PF01656.23 gi|91773752|ref|YP_566444.1| - 0.0066 16.5 0.8 1 9.4 0.0 2.5 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain NTPase_1 PF03266.15 gi|91773752|ref|YP_566444.1| - 0.013 15.4 0.1 2.7 7.9 0.0 2.4 2 0 0 2 2 2 0 NTPase DAP3 PF10236.9 gi|91773752|ref|YP_566444.1| - 0.018 14.3 0.1 0.13 11.4 0.0 2.1 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 TIP49 PF06068.13 gi|91773752|ref|YP_566444.1| - 0.018 14.3 1.6 0.25 10.5 0.1 2.3 2 0 0 2 2 2 0 TIP49 P-loop domain Roc PF08477.13 gi|91773752|ref|YP_566444.1| - 0.02 15.1 0.1 9.5 6.5 0.0 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Viral_helicase1 PF01443.18 gi|91773752|ref|YP_566444.1| - 0.02 14.7 0.2 1.6 8.4 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase PRK PF00485.18 gi|91773752|ref|YP_566444.1| - 0.02 14.6 0.5 1.5 8.5 0.0 2.5 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family TsaE PF02367.17 gi|91773752|ref|YP_566444.1| - 0.022 14.8 0.4 3.1 7.8 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE APS_kinase PF01583.20 gi|91773752|ref|YP_566444.1| - 0.025 14.5 1.6 5 7.0 0.0 2.7 3 0 0 3 3 3 0 Adenylylsulphate kinase Mg_chelatase PF01078.21 gi|91773752|ref|YP_566444.1| - 0.026 13.9 0.2 0.24 10.8 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 gi|91773752|ref|YP_566444.1| - 0.027 14.4 0.3 3.1 7.7 0.1 2.5 2 0 0 2 2 2 0 RsgA GTPase RNA_helicase PF00910.22 gi|91773752|ref|YP_566444.1| - 0.032 14.6 0.2 2.7 8.4 0.0 2.6 2 0 0 2 2 2 0 RNA helicase SRP54 PF00448.22 gi|91773752|ref|YP_566444.1| - 0.04 13.5 0.5 2.1 7.9 0.0 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DEAD PF00270.29 gi|91773752|ref|YP_566444.1| - 0.042 13.6 0.7 0.21 11.3 0.0 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_28 PF13521.6 gi|91773752|ref|YP_566444.1| - 0.043 14.1 2.8 5.4 7.2 0.1 2.8 3 0 0 3 3 2 0 AAA domain SRPRB PF09439.10 gi|91773752|ref|YP_566444.1| - 0.055 12.9 0.2 0.85 9.0 0.0 2.3 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit PduV-EutP PF10662.9 gi|91773752|ref|YP_566444.1| - 0.077 12.7 2.2 5.1 6.8 0.0 3.4 3 1 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation ATP_bind_1 PF03029.17 gi|91773752|ref|YP_566444.1| - 0.08 12.7 1.5 0.57 9.9 0.1 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein RuvB_N PF05496.12 gi|91773752|ref|YP_566444.1| - 0.084 12.6 0.2 3 7.5 0.0 2.5 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain TrwB_AAD_bind PF10412.9 gi|91773752|ref|YP_566444.1| - 0.095 11.6 0.3 6.9 5.5 0.1 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain TniB PF05621.11 gi|91773752|ref|YP_566444.1| - 0.12 11.8 0.0 8.1 5.8 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein G-alpha PF00503.20 gi|91773752|ref|YP_566444.1| - 0.12 11.5 1.1 6.1 5.9 0.0 2.3 2 1 0 2 2 2 0 G-protein alpha subunit FtsK_SpoIIIE PF01580.18 gi|91773752|ref|YP_566444.1| - 0.18 11.1 2.7 1.8 7.8 0.1 2.8 3 0 0 3 3 3 0 FtsK/SpoIIIE family AAA_5 PF07728.14 gi|91773752|ref|YP_566444.1| - 0.25 11.4 0.7 1.6 8.7 0.0 2.5 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 gi|91773752|ref|YP_566444.1| - 0.45 11.0 10.7 1.5 9.3 0.1 2.9 3 0 0 3 3 3 0 AAA domain NAD_synthase PF02540.17 gi|91773753|ref|YP_566445.1| - 2.2e-84 282.3 0.0 2.6e-84 282.1 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|91773753|ref|YP_566445.1| - 1.6e-07 30.4 0.0 7.5e-06 25.0 0.1 2.1 2 0 0 2 2 2 2 tRNA methyl transferase QueC PF06508.13 gi|91773753|ref|YP_566445.1| - 1.4e-05 24.7 0.0 3.5e-05 23.4 0.0 1.6 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|91773753|ref|YP_566445.1| - 0.00048 19.9 0.0 0.0005 19.8 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.14 gi|91773753|ref|YP_566445.1| - 0.13 11.8 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) DUF1743 PF08489.11 gi|91773754|ref|YP_566446.1| - 6.5e-38 129.4 0.0 1.3e-37 128.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) OrfB_Zn_ribbon PF07282.11 gi|91773754|ref|YP_566446.1| - 0.00013 21.8 1.9 0.00033 20.5 1.9 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain DZR PF12773.7 gi|91773754|ref|YP_566446.1| - 0.0012 18.8 1.9 0.0036 17.3 1.9 1.8 1 0 0 1 1 1 1 Double zinc ribbon Rep_fac-A_C PF08646.10 gi|91773754|ref|YP_566446.1| - 0.0017 18.1 0.7 0.0032 17.2 0.7 1.4 1 0 0 1 1 1 1 Replication factor-A C terminal domain C1_2 PF03107.16 gi|91773754|ref|YP_566446.1| - 0.0042 17.4 0.3 0.0096 16.2 0.3 1.6 1 0 0 1 1 1 1 C1 domain C1_1 PF00130.22 gi|91773754|ref|YP_566446.1| - 0.0073 16.2 1.7 0.015 15.1 1.7 1.5 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) HypA PF01155.19 gi|91773754|ref|YP_566446.1| - 0.012 15.6 0.5 0.012 15.6 0.5 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf_UBZ PF18439.1 gi|91773754|ref|YP_566446.1| - 0.021 14.4 1.1 4.6 6.9 0.1 3.0 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zinc-ribbons_6 PF07191.12 gi|91773754|ref|YP_566446.1| - 0.057 13.4 1.4 0.19 11.7 1.4 1.9 1 0 0 1 1 1 0 zinc-ribbons DNA_RNApol_7kD PF03604.13 gi|91773754|ref|YP_566446.1| - 0.083 12.6 4.6 0.31 10.8 4.6 2.1 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.6 gi|91773754|ref|YP_566446.1| - 0.12 12.1 3.1 8.9 6.2 0.2 2.9 2 0 0 2 2 2 0 zinc-ribbon domain CoA_binding PF02629.19 gi|91773754|ref|YP_566446.1| - 0.13 13.0 0.0 0.31 11.8 0.0 1.5 1 0 0 1 1 1 0 CoA binding domain Zn-ribbon_8 PF09723.10 gi|91773754|ref|YP_566446.1| - 0.15 12.2 2.2 7 6.9 0.1 3.0 3 0 0 3 3 3 0 Zinc ribbon domain Zn_ribbon_recom PF13408.6 gi|91773754|ref|YP_566446.1| - 0.33 11.5 3.3 1 10.0 3.3 1.8 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|91773754|ref|YP_566446.1| - 0.47 10.5 3.1 1.4 8.9 3.1 1.9 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|91773754|ref|YP_566446.1| - 1.6 8.4 6.0 4.6 7.0 6.0 1.7 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain HTH_3 PF01381.22 gi|91773755|ref|YP_566447.1| - 1.9e-09 37.4 0.2 9.6e-09 35.2 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|91773755|ref|YP_566447.1| - 5.7e-09 35.9 0.1 3.1e-08 33.5 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|91773755|ref|YP_566447.1| - 1.4e-05 25.3 0.0 2.7e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|91773755|ref|YP_566447.1| - 0.0015 18.5 0.1 0.0055 16.6 0.0 2.1 2 0 0 2 2 2 1 HTH domain HTH_25 PF13413.6 gi|91773755|ref|YP_566447.1| - 0.011 15.6 0.0 0.03 14.2 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|91773755|ref|YP_566447.1| - 0.023 14.5 0.0 0.05 13.5 0.0 1.6 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT GP3_package PF16677.5 gi|91773755|ref|YP_566447.1| - 0.071 13.2 0.0 0.2 11.8 0.0 1.8 2 0 0 2 2 2 0 DNA-packaging protein gp3 NUMOD1 PF07453.13 gi|91773755|ref|YP_566447.1| - 0.08 13.2 0.1 0.66 10.3 0.0 2.4 2 0 0 2 2 2 0 NUMOD1 domain HTH_38 PF13936.6 gi|91773755|ref|YP_566447.1| - 0.15 11.9 0.1 0.32 10.8 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|91773755|ref|YP_566447.1| - 0.17 11.7 0.0 0.4 10.5 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain Formyl_trans_N PF00551.19 gi|91773756|ref|YP_566448.1| - 1.5e-52 178.0 0.0 1.7e-52 177.8 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase DUF2824 PF11039.8 gi|91773756|ref|YP_566448.1| - 0.099 12.6 0.2 17 5.4 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2824) SHMT PF00464.19 gi|91773757|ref|YP_566449.1| - 1.3e-170 567.4 0.6 1.5e-170 567.1 0.6 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|91773757|ref|YP_566449.1| - 5.3e-10 39.0 0.0 6.8e-10 38.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|91773757|ref|YP_566449.1| - 2.1e-06 27.3 0.3 2.8e-06 26.8 0.3 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|91773757|ref|YP_566449.1| - 0.00021 20.4 0.1 0.00064 18.8 0.1 1.8 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|91773757|ref|YP_566449.1| - 0.00028 20.3 0.2 0.00093 18.6 0.1 1.8 1 1 1 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 gi|91773757|ref|YP_566449.1| - 0.0006 18.7 0.1 0.0014 17.4 0.1 1.5 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Cys_Met_Meta_PP PF01053.20 gi|91773757|ref|YP_566449.1| - 0.035 12.7 0.0 0.054 12.0 0.0 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme THF_DHG_CYH_C PF02882.19 gi|91773758|ref|YP_566450.1| - 5.5e-64 214.3 4.9 8.6e-64 213.7 4.9 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|91773758|ref|YP_566450.1| - 1.5e-39 134.9 0.2 2.4e-39 134.2 0.2 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AdoHcyase_NAD PF00670.21 gi|91773758|ref|YP_566450.1| - 0.0028 17.7 2.7 0.24 11.4 2.7 2.3 1 1 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PTS_IIB PF02302.17 gi|91773758|ref|YP_566450.1| - 0.016 15.9 2.6 0.12 13.1 0.4 2.7 2 1 1 3 3 3 0 PTS system, Lactose/Cellobiose specific IIB subunit Pterin_bind PF00809.22 gi|91773759|ref|YP_566451.1| - 1.4e-54 185.4 0.1 2e-54 184.9 0.1 1.3 1 0 0 1 1 1 1 Pterin binding enzyme MTHFR_C PF12225.8 gi|91773760|ref|YP_566452.1| - 2e-35 120.3 1.1 4.4e-35 119.2 1.1 1.6 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal HTH_24 PF13412.6 gi|91773761|ref|YP_566453.1| - 1.1e-15 56.9 0.0 1.1e-08 34.5 0.0 2.6 2 1 0 2 2 2 2 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|91773761|ref|YP_566453.1| - 1.5e-11 44.0 0.0 0.00021 21.1 0.0 2.6 2 0 0 2 2 2 2 MarR family HTH_5 PF01022.20 gi|91773761|ref|YP_566453.1| - 2.5e-11 43.2 0.0 9e-07 28.7 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|91773761|ref|YP_566453.1| - 7.8e-08 32.3 0.0 1.8e-05 24.7 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.22 gi|91773761|ref|YP_566453.1| - 5.5e-07 29.4 0.0 0.044 13.7 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_IclR PF09339.10 gi|91773761|ref|YP_566453.1| - 2.6e-06 27.1 0.0 0.064 13.1 0.0 2.3 2 0 0 2 2 2 2 IclR helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|91773761|ref|YP_566453.1| - 1.2e-05 25.4 0.6 0.14 12.4 0.0 2.9 1 1 2 3 3 3 2 B-block binding subunit of TFIIIC TFIIE_alpha PF02002.17 gi|91773761|ref|YP_566453.1| - 0.00054 19.8 0.0 0.052 13.4 0.0 2.2 2 0 0 2 2 2 1 TFIIE alpha subunit FaeA PF04703.12 gi|91773761|ref|YP_566453.1| - 0.0011 19.3 0.0 0.0026 18.1 0.0 1.6 1 0 0 1 1 1 1 FaeA-like protein TrmB PF01978.19 gi|91773761|ref|YP_566453.1| - 0.0037 17.1 0.0 2.6 8.0 0.0 2.3 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_40 PF14493.6 gi|91773761|ref|YP_566453.1| - 0.024 15.1 0.0 1.5 9.4 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain RP-C PF03428.13 gi|91773761|ref|YP_566453.1| - 0.026 14.2 0.0 1.2 8.7 0.0 2.2 2 0 0 2 2 2 0 Replication protein C N-terminal domain DDRGK PF09756.9 gi|91773761|ref|YP_566453.1| - 0.092 12.3 0.1 0.69 9.5 0.1 1.9 1 1 1 2 2 2 0 DDRGK domain SH3_15 PF18346.1 gi|91773763|ref|YP_566455.1| - 0.14 12.5 0.1 0.33 11.3 0.0 1.7 2 0 0 2 2 2 0 Mind bomb SH3 repeat domain S1-P1_nuclease PF02265.16 gi|91773764|ref|YP_566456.1| - 0.025 14.4 0.2 0.03 14.2 0.2 1.1 1 0 0 1 1 1 0 S1/P1 Nuclease LolA_like PF17131.4 gi|91773767|ref|YP_566459.1| - 1e-06 28.7 0.0 3e-06 27.1 0.0 1.8 1 1 0 1 1 1 1 Outer membrane lipoprotein-sorting protein LolA PF03548.15 gi|91773767|ref|YP_566459.1| - 0.033 13.9 0.0 0.076 12.7 0.0 1.5 2 0 0 2 2 2 0 Outer membrane lipoprotein carrier protein LolA Glyco_hydro2_C5 PF18565.1 gi|91773768|ref|YP_566460.1| - 0.12 12.2 0.1 0.21 11.4 0.1 1.4 1 0 0 1 1 1 0 Glycoside hydrolase family 2 C-terminal domain 5 Gram_pos_anchor PF00746.21 gi|91773768|ref|YP_566460.1| - 0.6 10.1 1.8 26 4.9 0.0 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif MTHFR_C PF12225.8 gi|91773769|ref|YP_566461.1| - 1.9e-35 120.4 1.2 4.3e-35 119.2 1.2 1.6 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal ATP-synt_E_2 PF08112.11 gi|91773770|ref|YP_566462.1| - 0.043 14.1 1.1 0.05 13.9 0.1 1.6 2 0 0 2 2 2 0 ATP synthase epsilon subunit Trypsin_2 PF13365.6 gi|91773770|ref|YP_566462.1| - 0.05 14.5 0.2 0.12 13.3 0.1 1.5 1 1 0 1 1 1 0 Trypsin-like peptidase domain HTH_24 PF13412.6 gi|91773771|ref|YP_566463.1| - 3.4e-15 55.3 0.0 5.5e-08 32.2 0.0 2.6 2 1 1 3 3 3 2 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|91773771|ref|YP_566463.1| - 7.5e-09 35.3 0.0 2.4e-05 24.1 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|91773771|ref|YP_566463.1| - 3.1e-08 33.4 0.0 0.0018 18.1 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_IclR PF09339.10 gi|91773771|ref|YP_566463.1| - 6.6e-07 29.0 0.0 0.0016 18.2 0.0 2.2 2 0 0 2 2 2 2 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|91773771|ref|YP_566463.1| - 3.7e-06 26.9 0.0 0.00016 21.7 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.22 gi|91773771|ref|YP_566463.1| - 1.2e-05 25.2 0.0 0.07 13.1 0.0 2.2 2 0 0 2 2 2 2 MarR family TrmB PF01978.19 gi|91773771|ref|YP_566463.1| - 0.00022 21.1 0.0 0.83 9.6 0.0 2.2 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB FaeA PF04703.12 gi|91773771|ref|YP_566463.1| - 0.0018 18.6 0.0 0.014 15.7 0.1 2.1 2 0 0 2 2 2 1 FaeA-like protein B-block_TFIIIC PF04182.12 gi|91773771|ref|YP_566463.1| - 0.006 16.7 0.5 5.2 7.3 0.3 2.7 1 1 2 3 3 3 2 B-block binding subunit of TFIIIC HTH_10 PF04967.12 gi|91773771|ref|YP_566463.1| - 0.064 13.1 0.0 2.4 8.0 0.0 2.4 2 0 0 2 2 2 0 HTH DNA binding domain TFIIE_alpha PF02002.17 gi|91773771|ref|YP_566463.1| - 0.088 12.7 0.0 9.6 6.1 0.0 2.2 1 1 1 2 2 2 0 TFIIE alpha subunit PD40 PF07676.12 gi|91773774|ref|YP_566466.1| - 1.3e-05 25.0 6.2 2.2 8.3 0.0 5.5 5 0 0 5 5 5 3 WD40-like Beta Propeller Repeat ANAPC4_WD40 PF12894.7 gi|91773774|ref|YP_566466.1| - 0.00013 22.2 0.1 0.0018 18.5 0.0 3.1 5 0 0 5 5 5 1 Anaphase-promoting complex subunit 4 WD40 domain DPPIV_N PF00930.21 gi|91773774|ref|YP_566466.1| - 0.0019 17.0 4.1 0.71 8.6 0.0 4.7 4 1 1 6 6 6 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region ABC2_membrane_2 PF12679.7 gi|91773775|ref|YP_566467.1| - 2.7e-36 125.4 19.0 4.7e-35 121.3 19.0 2.0 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|91773775|ref|YP_566467.1| - 9e-10 38.2 16.3 9e-10 38.2 16.3 1.6 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|91773775|ref|YP_566467.1| - 7.7e-07 29.2 18.9 7.7e-07 29.2 18.9 2.1 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|91773775|ref|YP_566467.1| - 0.0069 15.8 27.5 0.0057 16.1 24.0 2.0 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_5 PF13346.6 gi|91773775|ref|YP_566467.1| - 0.032 13.8 28.4 0.11 12.0 24.1 2.9 2 1 0 2 2 2 0 ABC-2 family transporter protein Fig1 PF12351.8 gi|91773775|ref|YP_566467.1| - 5.8 6.8 27.4 0.039 13.9 6.4 2.9 2 1 2 4 4 4 0 Ca2+ regulator and membrane fusion protein Fig1 ABC2_membrane_2 PF12679.7 gi|91773776|ref|YP_566468.1| - 1.1e-35 123.4 18.8 6.7e-35 120.8 18.8 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|91773776|ref|YP_566468.1| - 1.5e-09 37.5 22.8 2.4e-09 36.8 22.9 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|91773776|ref|YP_566468.1| - 7e-07 29.4 17.9 7e-07 29.4 17.9 2.8 2 1 1 3 3 3 1 ABC-2 family transporter protein Curto_V3 PF07436.11 gi|91773776|ref|YP_566468.1| - 0.054 13.9 0.4 0.054 13.9 0.4 2.8 3 0 0 3 3 3 0 Curtovirus V3 protein ABC2_membrane_5 PF13346.6 gi|91773776|ref|YP_566468.1| - 0.069 12.7 27.1 0.036 13.6 21.6 2.8 2 1 0 2 2 2 0 ABC-2 family transporter protein L6_membrane PF05805.12 gi|91773776|ref|YP_566468.1| - 3.4 7.2 11.1 0.2 11.2 1.2 2.5 3 0 0 3 3 3 0 L6 membrane protein NPCBM_assoc PF10633.9 gi|91773777|ref|YP_566469.1| - 3.3e-09 36.9 0.5 0.031 14.5 0.0 4.1 4 0 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|91773777|ref|YP_566469.1| - 0.00054 20.2 0.3 0.91 9.9 0.0 3.8 3 2 0 3 3 3 1 Domain of unknown function DUF11 CARDB PF07705.11 gi|91773777|ref|YP_566469.1| - 0.00057 20.1 1.8 0.014 15.6 0.1 2.9 2 1 0 2 2 2 1 CARDB FixG_C PF11614.8 gi|91773777|ref|YP_566469.1| - 0.0024 18.1 2.5 0.22 11.7 0.3 3.4 1 1 2 3 3 3 1 IG-like fold at C-terminal of FixG, putative oxidoreductase Fn3-like PF14310.6 gi|91773777|ref|YP_566469.1| - 0.043 13.9 0.0 1 9.5 0.1 3.1 2 0 0 2 2 2 0 Fibronectin type III-like domain ABC_tran PF00005.27 gi|91773778|ref|YP_566470.1| - 2.3e-26 92.9 0.0 5.5e-26 91.7 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|91773778|ref|YP_566470.1| - 2.1e-13 50.8 0.1 2.6e-08 34.0 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|91773778|ref|YP_566470.1| - 6.8e-06 26.0 0.0 0.12 12.1 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|91773778|ref|YP_566470.1| - 0.00071 20.1 0.4 0.0013 19.3 0.4 1.7 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|91773778|ref|YP_566470.1| - 0.0031 17.9 0.8 0.054 13.9 0.8 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF4162 PF13732.6 gi|91773778|ref|YP_566470.1| - 0.007 17.1 0.3 0.026 15.2 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 gi|91773778|ref|YP_566470.1| - 0.027 14.2 0.1 0.068 12.9 0.1 1.7 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|91773778|ref|YP_566470.1| - 0.039 13.6 0.1 0.11 12.1 0.1 1.7 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_22 PF13401.6 gi|91773778|ref|YP_566470.1| - 0.041 14.2 0.3 0.3 11.4 0.3 2.2 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|91773778|ref|YP_566470.1| - 0.052 13.5 0.1 0.81 9.6 0.0 2.3 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|91773778|ref|YP_566470.1| - 0.11 12.3 0.3 0.22 11.3 0.3 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 gi|91773778|ref|YP_566470.1| - 0.15 11.5 0.1 13 5.2 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain FbpA PF05833.11 gi|91773779|ref|YP_566471.1| - 0.05 12.4 0.2 0.25 10.1 0.0 2.0 2 0 0 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) PLDc_N PF13396.6 gi|91773780|ref|YP_566472.1| - 2.6e-12 46.4 0.3 2.6e-12 46.4 0.3 2.3 2 1 0 2 2 2 1 Phospholipase_D-nuclease N-terminal DUF2516 PF10724.9 gi|91773780|ref|YP_566472.1| - 0.00038 20.7 0.8 0.00051 20.3 0.4 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2516) DUF2207 PF09972.9 gi|91773780|ref|YP_566472.1| - 0.17 10.6 1.9 0.19 10.4 1.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) AAA_14 PF13173.6 gi|91773781|ref|YP_566473.1| - 6.8e-28 97.3 0.0 2.1e-27 95.8 0.0 1.9 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|91773781|ref|YP_566473.1| - 1.2e-11 44.8 0.1 2.4e-11 43.8 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|91773781|ref|YP_566473.1| - 0.00071 19.6 0.0 0.0016 18.4 0.0 1.7 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|91773781|ref|YP_566473.1| - 0.0024 18.2 0.0 0.11 12.8 0.0 2.3 1 1 1 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|91773781|ref|YP_566473.1| - 0.0031 17.9 0.0 0.011 16.2 0.0 2.0 1 0 0 1 1 1 1 RNA helicase AAA PF00004.29 gi|91773781|ref|YP_566473.1| - 0.022 15.2 0.0 0.06 13.8 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|91773781|ref|YP_566473.1| - 0.024 14.6 0.1 0.19 11.6 0.0 2.6 2 1 0 2 2 2 0 NACHT domain CLP1_P PF16575.5 gi|91773781|ref|YP_566473.1| - 0.037 13.8 0.0 0.074 12.8 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop DUF234 PF03008.14 gi|91773781|ref|YP_566473.1| - 0.088 13.3 1.3 0.41 11.1 0.0 2.7 3 0 0 3 3 3 0 Archaea bacterial proteins of unknown function ABC_tran PF00005.27 gi|91773781|ref|YP_566473.1| - 0.11 13.0 0.0 2.1 8.9 0.0 2.5 2 1 0 2 2 2 0 ABC transporter HTH_11 PF08279.12 gi|91773781|ref|YP_566473.1| - 0.13 12.3 0.1 0.28 11.2 0.1 1.5 1 0 0 1 1 1 0 HTH domain AAA_16 PF13191.6 gi|91773781|ref|YP_566473.1| - 0.21 12.0 0.0 0.39 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain SWI2_SNF2 PF18766.1 gi|91773782|ref|YP_566474.1| - 2.2e-62 210.7 4.0 2.2e-62 210.7 4.0 2.4 3 0 0 3 3 3 1 SWI2/SNF2 ATPase EcoR124_C PF12008.8 gi|91773782|ref|YP_566474.1| - 4.8e-61 206.7 27.5 4.8e-61 206.7 27.5 3.6 2 1 0 2 2 2 1 Type I restriction and modification enzyme - subunit R C terminal HSDR_N PF04313.14 gi|91773782|ref|YP_566474.1| - 1.8e-39 135.7 4.9 1.8e-39 135.7 4.9 3.8 3 1 1 4 4 4 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|91773782|ref|YP_566474.1| - 1.5e-36 125.9 1.9 1.5e-36 125.9 1.9 2.9 3 2 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|91773782|ref|YP_566474.1| - 1.9e-10 40.8 0.8 1.3e-09 38.1 0.6 2.4 1 1 1 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|91773782|ref|YP_566474.1| - 0.45 10.9 0.1 0.45 10.9 0.1 3.8 3 1 2 5 5 5 0 Helicase conserved C-terminal domain T3SchapCesA PF11439.8 gi|91773782|ref|YP_566474.1| - 0.47 10.6 7.9 0.084 13.0 1.3 3.2 3 0 0 3 3 3 0 Type III secretion system filament chaperone CesA Ubiquitin_3 PF14836.6 gi|91773782|ref|YP_566474.1| - 0.65 10.0 2.7 4.1 7.5 0.3 2.8 1 1 1 2 2 2 0 Ubiquitin-like domain Methylase_S PF01420.19 gi|91773783|ref|YP_566475.1| - 3.1e-28 99.1 18.3 1.4e-21 77.5 0.4 2.7 2 1 0 2 2 2 2 Type I restriction modification DNA specificity domain Herpes_UL31 PF02718.14 gi|91773783|ref|YP_566475.1| - 0.0095 14.9 0.1 0.015 14.3 0.1 1.2 1 0 0 1 1 1 1 Herpesvirus UL31-like protein DUF2443 PF10398.9 gi|91773783|ref|YP_566475.1| - 0.061 13.4 2.2 2.2 8.4 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2443) N6_Mtase PF02384.16 gi|91773784|ref|YP_566476.1| - 1.1e-111 373.1 0.0 1.4e-111 372.7 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|91773784|ref|YP_566476.1| - 4.2e-18 66.3 1.2 6.8e-17 62.4 1.2 2.7 1 1 0 1 1 1 1 HsdM N-terminal domain MTS PF05175.14 gi|91773784|ref|YP_566476.1| - 7.1e-07 28.9 0.0 8.4e-06 25.4 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Eco57I PF07669.11 gi|91773784|ref|YP_566476.1| - 5.7e-05 23.6 0.0 0.00021 21.8 0.0 2.0 2 0 0 2 2 2 1 Eco57I restriction-modification methylase UPF0020 PF01170.18 gi|91773784|ref|YP_566476.1| - 0.0019 17.9 0.0 0.018 14.7 0.0 2.3 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 N6-adenineMlase PF10237.9 gi|91773784|ref|YP_566476.1| - 0.0022 17.8 0.1 0.011 15.6 0.0 2.2 2 0 0 2 2 2 1 Probable N6-adenine methyltransferase Methyltransf_31 PF13847.6 gi|91773784|ref|YP_566476.1| - 0.01 15.7 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain AviRa PF11599.8 gi|91773784|ref|YP_566476.1| - 0.012 15.0 0.0 0.022 14.2 0.0 1.3 1 0 0 1 1 1 0 RRNA methyltransferase AviRa Methyltransf_25 PF13649.6 gi|91773784|ref|YP_566476.1| - 0.025 15.3 0.0 0.15 12.8 0.0 2.3 2 0 0 2 2 2 0 Methyltransferase domain PLDc_N PF13396.6 gi|91773785|ref|YP_566477.1| - 5.2e-10 39.1 0.8 5.2e-10 39.1 0.8 2.2 2 1 0 2 2 2 1 Phospholipase_D-nuclease N-terminal DUF2516 PF10724.9 gi|91773785|ref|YP_566477.1| - 0.00023 21.4 1.6 0.00023 21.4 1.6 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF2516) DUF4131 PF13567.6 gi|91773785|ref|YP_566477.1| - 1.4 8.6 9.5 0.28 10.8 3.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) VKOR PF07884.14 gi|91773785|ref|YP_566477.1| - 3.3 7.9 10.0 21 5.3 10.0 1.9 1 1 0 1 1 1 0 Vitamin K epoxide reductase family Col_cuticle_N PF01484.17 gi|91773786|ref|YP_566478.1| - 0.0072 16.4 3.0 1.4 9.0 0.2 2.3 2 0 0 2 2 2 2 Nematode cuticle collagen N-terminal domain ABC2_membrane_3 PF12698.7 gi|91773786|ref|YP_566478.1| - 0.12 11.5 7.0 0.13 11.4 7.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Gram_pos_anchor PF00746.21 gi|91773786|ref|YP_566478.1| - 0.15 12.0 3.9 0.34 10.9 1.0 2.2 2 0 0 2 2 2 0 LPXTG cell wall anchor motif DUF347 PF03988.12 gi|91773786|ref|YP_566478.1| - 0.16 12.2 8.3 0.32 11.2 0.3 2.2 2 0 0 2 2 2 0 Repeat of Unknown Function (DUF347) PMP1_2 PF08114.11 gi|91773786|ref|YP_566478.1| - 0.96 9.2 5.9 0.27 11.0 1.2 2.1 2 0 0 2 2 2 0 ATPase proteolipid family MTHFR PF02219.17 gi|91773788|ref|YP_566480.1| - 7.6e-36 123.9 0.0 8.5e-36 123.7 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase Hydrolase_like PF13242.6 gi|91773788|ref|YP_566480.1| - 0.045 13.8 0.1 0.11 12.5 0.1 1.7 1 0 0 1 1 1 0 HAD-hyrolase-like AP_endonuc_2 PF01261.24 gi|91773788|ref|YP_566480.1| - 0.15 11.4 0.0 0.44 9.9 0.0 1.9 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel ThiC_Rad_SAM PF01964.18 gi|91773789|ref|YP_566481.1| - 3e-146 487.5 0.8 3.4e-146 487.3 0.8 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family F420_ligase PF01996.16 gi|91773790|ref|YP_566482.1| - 1.3e-58 198.2 0.0 1.5e-58 198.0 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase YdjM PF04307.14 gi|91773791|ref|YP_566483.1| - 1.3e-06 27.8 4.3 1.6e-06 27.6 4.3 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF4184 PF13803.6 gi|91773791|ref|YP_566483.1| - 0.0001 22.1 10.5 0.075 12.7 0.2 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4184) Kinocilin PF15033.6 gi|91773791|ref|YP_566483.1| - 0.55 9.9 2.8 10 5.8 0.1 2.3 2 0 0 2 2 2 0 Kinocilin protein Thioredoxin PF00085.20 gi|91773792|ref|YP_566484.1| - 5.2e-22 77.8 0.0 5.5e-22 77.7 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|91773792|ref|YP_566484.1| - 3.7e-09 37.0 0.1 1.3e-08 35.3 0.1 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|91773792|ref|YP_566484.1| - 6.5e-07 29.6 0.0 0.0015 18.8 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_9 PF14595.6 gi|91773792|ref|YP_566484.1| - 6.2e-06 26.0 0.0 7.4e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Glutaredoxin PF00462.24 gi|91773792|ref|YP_566484.1| - 2e-05 24.7 0.0 3.3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_3 PF13192.6 gi|91773792|ref|YP_566484.1| - 6.1e-05 23.0 0.1 6.6e-05 22.9 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin domain Redoxin PF08534.10 gi|91773792|ref|YP_566484.1| - 8.8e-05 22.2 0.2 0.055 13.2 0.0 2.0 1 1 1 2 2 2 2 Redoxin KaiB PF07689.12 gi|91773792|ref|YP_566484.1| - 0.00018 21.2 0.0 0.00021 21.0 0.0 1.1 1 0 0 1 1 1 1 KaiB domain TraF PF13728.6 gi|91773792|ref|YP_566484.1| - 0.00069 19.5 0.0 0.00088 19.2 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Calsequestrin PF01216.17 gi|91773792|ref|YP_566484.1| - 0.0012 18.0 0.0 0.0013 17.9 0.0 1.0 1 0 0 1 1 1 1 Calsequestrin AhpC-TSA PF00578.21 gi|91773792|ref|YP_566484.1| - 0.0034 17.3 0.1 0.022 14.7 0.1 1.9 1 1 0 1 1 1 1 AhpC/TSA family DSBA PF01323.20 gi|91773792|ref|YP_566484.1| - 0.0065 16.3 0.1 0.032 14.0 0.0 1.8 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_7 PF13899.6 gi|91773792|ref|YP_566484.1| - 0.0082 16.3 0.0 0.014 15.6 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like DUF836 PF05768.14 gi|91773792|ref|YP_566484.1| - 0.017 15.5 0.0 0.02 15.3 0.0 1.1 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) HyaE PF07449.11 gi|91773792|ref|YP_566484.1| - 0.019 14.9 0.0 0.021 14.8 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Thioredoxin_4 PF13462.6 gi|91773792|ref|YP_566484.1| - 0.13 12.4 0.1 0.19 11.9 0.0 1.3 1 1 0 1 1 1 0 Thioredoxin Thioredoxin_6 PF13848.6 gi|91773792|ref|YP_566484.1| - 0.21 11.5 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Lactamase_B_2 PF12706.7 gi|91773793|ref|YP_566485.1| - 9.1e-06 25.3 0.2 3.9e-05 23.2 0.1 1.8 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|91773793|ref|YP_566485.1| - 0.001 19.1 0.2 0.46 10.5 0.0 2.4 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|91773793|ref|YP_566485.1| - 0.0055 16.6 0.1 0.012 15.5 0.1 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain RMMBL PF07521.12 gi|91773793|ref|YP_566485.1| - 0.012 15.6 0.1 0.21 11.5 0.0 2.5 3 0 0 3 3 3 0 Zn-dependent metallo-hydrolase RNA specificity domain ABC_tran PF00005.27 gi|91773795|ref|YP_566487.1| - 4.6e-41 140.5 0.0 9.5e-23 81.2 0.0 2.4 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|91773795|ref|YP_566487.1| - 5.5e-13 48.9 7.4 0.0002 20.8 0.0 4.2 4 0 0 4 4 4 3 RecF/RecN/SMC N terminal domain RLI PF04068.15 gi|91773795|ref|YP_566487.1| - 2.1e-12 46.6 3.0 4.3e-12 45.7 3.0 1.5 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI AAA_21 PF13304.6 gi|91773795|ref|YP_566487.1| - 3.6e-10 40.1 5.1 0.0094 15.8 0.1 4.3 2 2 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system Fer4 PF00037.27 gi|91773795|ref|YP_566487.1| - 1.9e-07 30.6 3.7 1.9e-07 30.6 3.7 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_22 PF13401.6 gi|91773795|ref|YP_566487.1| - 1.6e-06 28.5 0.0 0.0004 20.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|91773795|ref|YP_566487.1| - 1.7e-06 28.1 0.0 0.096 12.6 0.0 2.5 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_23 PF13476.6 gi|91773795|ref|YP_566487.1| - 1.9e-05 25.2 0.8 0.17 12.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|91773795|ref|YP_566487.1| - 2.7e-05 24.6 0.0 0.085 13.2 0.0 3.2 3 0 0 3 3 3 1 AAA ATPase domain Fer4_6 PF12837.7 gi|91773795|ref|YP_566487.1| - 9.5e-05 22.3 2.6 9.5e-05 22.3 2.6 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain RsgA_GTPase PF03193.16 gi|91773795|ref|YP_566487.1| - 0.00011 22.1 0.5 0.049 13.5 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase RNA_helicase PF00910.22 gi|91773795|ref|YP_566487.1| - 0.00013 22.3 0.0 0.24 11.8 0.0 2.6 2 0 0 2 2 2 1 RNA helicase Fer4_21 PF14697.6 gi|91773795|ref|YP_566487.1| - 0.00018 21.6 6.8 0.00032 20.8 6.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_24 PF13479.6 gi|91773795|ref|YP_566487.1| - 0.00022 21.0 0.1 0.18 11.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain Fer4_10 PF13237.6 gi|91773795|ref|YP_566487.1| - 0.00058 19.9 9.9 0.0028 17.7 1.0 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_15 PF13175.6 gi|91773795|ref|YP_566487.1| - 0.00065 19.5 3.4 0.67 9.6 0.4 3.2 3 0 0 3 3 3 1 AAA ATPase domain AAA_29 PF13555.6 gi|91773795|ref|YP_566487.1| - 0.00072 19.3 3.1 0.73 9.6 0.2 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain Fer4_9 PF13187.6 gi|91773795|ref|YP_566487.1| - 0.00097 19.3 7.5 0.0019 18.3 7.5 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773795|ref|YP_566487.1| - 0.001 19.1 1.2 0.001 19.1 1.2 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA PF00004.29 gi|91773795|ref|YP_566487.1| - 0.0047 17.4 0.0 0.44 11.0 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Fer4_7 PF12838.7 gi|91773795|ref|YP_566487.1| - 0.0055 17.3 1.6 0.0055 17.3 1.6 2.3 1 1 2 3 3 3 2 4Fe-4S dicluster domain dNK PF01712.19 gi|91773795|ref|YP_566487.1| - 0.0088 15.9 0.0 3.8 7.3 0.0 2.5 2 0 0 2 2 2 1 Deoxynucleoside kinase AAA_25 PF13481.6 gi|91773795|ref|YP_566487.1| - 0.0091 15.6 0.7 3.1 7.3 0.0 3.6 4 0 0 4 4 4 1 AAA domain NACHT PF05729.12 gi|91773795|ref|YP_566487.1| - 0.013 15.5 0.2 0.86 9.5 0.0 2.4 2 0 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 gi|91773795|ref|YP_566487.1| - 0.017 15.7 0.1 9 6.9 0.0 3.1 3 0 0 3 3 3 0 AAA domain AAA_5 PF07728.14 gi|91773795|ref|YP_566487.1| - 0.026 14.5 0.0 16 5.5 0.0 3.0 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|91773795|ref|YP_566487.1| - 0.028 14.5 1.9 3.6 7.6 0.1 3.5 3 1 0 3 3 3 0 AAA domain VirE PF05272.11 gi|91773795|ref|YP_566487.1| - 0.031 14.0 0.0 3.3 7.4 0.0 2.3 2 0 0 2 2 2 0 Virulence-associated protein E SbcCD_C PF13558.6 gi|91773795|ref|YP_566487.1| - 0.033 14.4 0.0 13 6.1 0.0 2.9 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 gi|91773795|ref|YP_566487.1| - 0.046 13.9 1.5 1.7 8.8 0.0 3.2 4 0 0 4 4 3 0 AAA domain MMR_HSR1 PF01926.23 gi|91773795|ref|YP_566487.1| - 0.047 13.8 0.4 0.98 9.5 0.1 2.7 2 1 0 2 2 2 0 50S ribosome-binding GTPase Fer4_4 PF12800.7 gi|91773795|ref|YP_566487.1| - 0.048 14.2 1.9 0.048 14.2 1.9 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain DUF87 PF01935.17 gi|91773795|ref|YP_566487.1| - 0.071 13.2 0.9 18 5.3 0.0 2.9 3 0 0 3 3 3 0 Helicase HerA, central domain Fer4_8 PF13183.6 gi|91773795|ref|YP_566487.1| - 0.099 13.1 0.3 0.099 13.1 0.3 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain MeaB PF03308.16 gi|91773795|ref|YP_566487.1| - 0.1 11.6 1.2 2.5 7.0 0.1 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NTPase_1 PF03266.15 gi|91773795|ref|YP_566487.1| - 0.12 12.3 2.6 4.8 7.1 0.0 3.4 4 0 0 4 4 4 0 NTPase NB-ARC PF00931.22 gi|91773795|ref|YP_566487.1| - 0.12 11.5 0.1 1.3 8.2 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain AAA_28 PF13521.6 gi|91773795|ref|YP_566487.1| - 0.17 12.1 0.7 19 5.5 0.0 2.8 3 0 0 3 3 2 0 AAA domain Fer4_11 PF13247.6 gi|91773795|ref|YP_566487.1| - 0.42 10.8 3.0 0.82 9.8 3.0 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain MS_channel PF00924.18 gi|91773796|ref|YP_566488.1| - 4.2 6.9 6.1 6.1 6.3 6.1 1.3 1 0 0 1 1 1 0 Mechanosensitive ion channel DUF11 PF01345.18 gi|91773797|ref|YP_566489.1| - 5.3e-10 39.5 0.3 3.2e-05 24.1 0.0 3.3 3 0 0 3 3 3 2 Domain of unknown function DUF11 BatD PF13584.6 gi|91773797|ref|YP_566489.1| - 1.9e-06 27.0 2.8 0.0015 17.4 0.4 2.8 1 1 1 2 2 2 2 Oxygen tolerance CARDB PF07705.11 gi|91773797|ref|YP_566489.1| - 1.3e-05 25.4 2.3 0.16 12.2 0.0 3.9 4 0 0 4 4 4 2 CARDB bMG10 PF17973.1 gi|91773797|ref|YP_566489.1| - 9.9e-05 22.5 0.2 0.9 9.7 0.0 3.7 2 1 1 3 3 3 2 Bacterial Alpha-2-macroglobulin MG10 domain TRAP_beta PF05753.14 gi|91773797|ref|YP_566489.1| - 0.0016 17.8 1.1 0.03 13.7 0.2 2.9 2 1 1 3 3 3 1 Translocon-associated protein beta (TRAPB) Top6b_C PF18000.1 gi|91773797|ref|YP_566489.1| - 0.012 15.8 0.7 23 5.2 0.0 4.0 2 1 0 2 2 2 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain CS PF04969.16 gi|91773797|ref|YP_566489.1| - 0.13 13.3 0.5 74 4.5 0.0 3.5 4 0 0 4 4 4 0 CS domain Orf78 PF06024.12 gi|91773797|ref|YP_566489.1| - 0.17 12.2 1.6 0.19 12.0 0.0 1.9 2 0 0 2 2 2 0 Orf78 (ac78) Gryzun PF07919.12 gi|91773797|ref|YP_566489.1| - 0.32 9.7 3.0 8.4 5.0 0.2 2.4 2 1 1 3 3 3 0 Gryzun, putative trafficking through Golgi DUF4750 PF15938.5 gi|91773797|ref|YP_566489.1| - 8.8 6.1 8.1 10 5.8 1.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) His_biosynth PF00977.21 gi|91773798|ref|YP_566490.1| - 3.1e-88 295.1 0.4 3.6e-88 294.9 0.4 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.14 gi|91773798|ref|YP_566490.1| - 1e-06 28.3 0.2 0.0025 17.2 0.1 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG G3P_antiterm PF04309.12 gi|91773798|ref|YP_566490.1| - 1.3e-06 28.0 0.2 0.00033 20.1 0.1 2.2 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator Dus PF01207.17 gi|91773798|ref|YP_566490.1| - 3.4e-06 26.4 0.0 0.00024 20.3 0.0 2.1 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|91773798|ref|YP_566490.1| - 5.7e-06 25.9 0.1 0.0033 16.9 0.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase TMP-TENI PF02581.17 gi|91773798|ref|YP_566490.1| - 1.5e-05 24.4 0.1 0.01 15.2 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase DHO_dh PF01180.21 gi|91773798|ref|YP_566490.1| - 3.7e-05 23.1 0.1 0.0022 17.3 0.0 2.1 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase IMPDH PF00478.25 gi|91773798|ref|YP_566490.1| - 0.00025 20.2 0.6 0.15 11.0 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain PcrB PF01884.17 gi|91773798|ref|YP_566490.1| - 0.0054 16.2 0.2 0.017 14.6 0.1 1.8 2 0 0 2 2 2 1 PcrB family Sigma70_r3 PF04539.16 gi|91773798|ref|YP_566490.1| - 0.27 11.3 3.0 13 6.0 0.0 3.8 4 0 0 4 4 4 0 Sigma-70 region 3 MazG PF03819.17 gi|91773799|ref|YP_566491.1| - 2.3e-15 56.5 0.0 2.9e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 gi|91773799|ref|YP_566491.1| - 5.6e-05 23.5 0.1 6.9e-05 23.2 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG-like PF12643.7 gi|91773799|ref|YP_566491.1| - 0.014 15.7 0.1 0.022 15.0 0.1 1.2 1 0 0 1 1 1 0 MazG-like family Cys_rich_KTR PF14205.6 gi|91773799|ref|YP_566491.1| - 0.05 13.4 3.0 0.083 12.7 3.0 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR PGF-CTERM PF18204.1 gi|91773800|ref|YP_566492.1| - 1.6e-05 24.7 1.2 2.7e-05 24.0 1.2 1.4 1 0 0 1 1 1 1 PGF-CTERM motif NGP1NT PF08153.12 gi|91773800|ref|YP_566492.1| - 0.089 12.9 0.0 1.2 9.2 0.0 2.3 2 0 0 2 2 2 0 NGP1NT (NUC091) domain COE1_DBD PF16422.5 gi|91773800|ref|YP_566492.1| - 0.095 12.1 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain NKAIN PF05640.14 gi|91773801|ref|YP_566493.1| - 0.014 14.6 5.6 0.015 14.5 5.6 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein Peptidase_U32 PF01136.19 gi|91773802|ref|YP_566494.1| - 8.9e-119 394.8 0.0 8.6e-85 283.6 0.0 2.2 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.8 gi|91773802|ref|YP_566494.1| - 3.5e-24 85.5 0.0 6.5e-24 84.6 0.0 1.5 1 0 0 1 1 1 1 Collagenase Radical_SAM PF04055.21 gi|91773802|ref|YP_566494.1| - 0.042 14.2 0.1 30 5.0 0.0 3.2 3 1 1 4 4 4 0 Radical SAM superfamily PEP_mutase PF13714.6 gi|91773802|ref|YP_566494.1| - 0.11 11.9 1.9 10 5.5 0.0 3.6 4 0 0 4 4 4 0 Phosphoenolpyruvate phosphomutase Nuc_deoxyrib_tr PF05014.15 gi|91773803|ref|YP_566495.1| - 1.3e-06 28.5 0.0 1.4e-06 28.4 0.0 1.0 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase BofA PF07441.11 gi|91773804|ref|YP_566496.1| - 1.2e-10 41.4 24.9 1.5e-10 41.1 24.9 1.1 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA YqhR PF11085.8 gi|91773804|ref|YP_566496.1| - 0.75 9.7 16.5 0.11 12.4 10.4 1.9 1 1 1 2 2 2 0 Conserved membrane protein YqhR Methyltransf_11 PF08241.12 gi|91773805|ref|YP_566497.1| - 1.4e-21 76.9 0.0 2.1e-21 76.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91773805|ref|YP_566497.1| - 5e-19 68.8 0.0 8.7e-19 68.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91773805|ref|YP_566497.1| - 4.2e-13 49.4 0.0 5.6e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91773805|ref|YP_566497.1| - 1.4e-12 48.2 0.0 2.1e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91773805|ref|YP_566497.1| - 8.2e-12 45.2 0.0 1.1e-11 44.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|91773805|ref|YP_566497.1| - 1.8e-06 27.5 0.0 2.1e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 gi|91773805|ref|YP_566497.1| - 0.00015 21.2 0.0 0.00022 20.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|91773805|ref|YP_566497.1| - 0.0029 17.2 0.0 0.0041 16.7 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.14 gi|91773805|ref|YP_566497.1| - 0.0038 16.8 0.0 0.0052 16.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain CheR PF01739.18 gi|91773805|ref|YP_566497.1| - 0.0065 16.0 0.0 0.025 14.0 0.0 1.9 1 1 0 2 2 2 1 CheR methyltransferase, SAM binding domain TehB PF03848.14 gi|91773805|ref|YP_566497.1| - 0.0093 15.4 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Caf4 PF11615.8 gi|91773805|ref|YP_566497.1| - 0.095 12.7 0.0 5.3 7.1 0.0 2.4 2 0 0 2 2 2 0 CCR4-associated factor 4 Methyltransf_8 PF05148.15 gi|91773805|ref|YP_566497.1| - 0.1 12.4 0.0 0.38 10.6 0.0 1.9 1 1 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_29 PF03141.16 gi|91773805|ref|YP_566497.1| - 0.12 10.9 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase tRNA-synt_1f PF01921.18 gi|91773806|ref|YP_566498.1| - 1.8e-125 418.6 0.0 2.7e-125 418.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|91773806|ref|YP_566498.1| - 6.8e-09 34.9 0.0 0.00018 20.4 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|91773806|ref|YP_566498.1| - 2.9e-06 26.9 0.0 0.057 12.7 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1b PF00579.25 gi|91773806|ref|YP_566498.1| - 0.082 12.2 0.0 6.7 5.9 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) zf-IS66 PF13005.7 gi|91773806|ref|YP_566498.1| - 0.29 11.6 0.0 0.29 11.6 0.0 3.2 4 1 1 5 5 5 0 zinc-finger binding domain of transposase IS66 HEPN_Swt1 PF18731.1 gi|91773807|ref|YP_566499.1| - 9.9e-11 42.0 0.2 2.2e-10 40.9 0.2 1.6 1 0 0 1 1 1 1 Swt1-like HEPN HNH PF01844.23 gi|91773807|ref|YP_566499.1| - 0.00048 20.2 3.4 1 9.6 0.0 2.7 2 0 0 2 2 2 2 HNH endonuclease CxC7 PF18866.1 gi|91773807|ref|YP_566499.1| - 0.013 15.6 0.2 0.059 13.5 0.0 2.2 2 1 1 3 3 3 0 CxC7 like cysteine cluster associated with KDZ transposases DUF2556 PF10831.8 gi|91773807|ref|YP_566499.1| - 0.052 13.5 0.1 0.34 10.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2556) DUF2004 PF09406.10 gi|91773807|ref|YP_566499.1| - 0.074 13.4 0.1 1.8 8.9 0.1 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2004) FYDLN_acid PF09538.10 gi|91773807|ref|YP_566499.1| - 0.078 13.7 0.3 0.18 12.5 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) HNH_5 PF14279.6 gi|91773807|ref|YP_566499.1| - 0.16 11.9 3.7 0.22 11.4 1.1 2.6 3 0 0 3 3 3 0 HNH endonuclease Orn_Arg_deC_N PF02784.16 gi|91773808|ref|YP_566500.1| - 5.4e-15 55.4 0.0 7.4e-15 55.0 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|91773808|ref|YP_566500.1| - 0.001 19.3 0.0 0.0013 18.9 0.0 1.5 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DS PF01916.17 gi|91773809|ref|YP_566501.1| - 2.3e-98 329.0 0.5 2.6e-98 328.8 0.5 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase SIMPL PF04402.14 gi|91773810|ref|YP_566502.1| - 3.7e-46 158.1 5.0 4.6e-46 157.8 5.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) PvlArgDC PF01862.16 gi|91773811|ref|YP_566503.1| - 7e-61 204.8 0.0 7.8e-61 204.6 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Fe_dep_repress PF01325.19 gi|91773812|ref|YP_566504.1| - 9.8e-19 67.3 0.1 1.7e-18 66.5 0.1 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|91773812|ref|YP_566504.1| - 8e-17 61.1 0.0 1.2e-15 57.3 0.0 2.5 2 0 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain FeoA PF04023.14 gi|91773812|ref|YP_566504.1| - 1.4e-12 47.6 0.2 2.8e-12 46.7 0.1 1.6 2 0 0 2 2 1 1 FeoA domain HTH_Crp_2 PF13545.6 gi|91773812|ref|YP_566504.1| - 1.8e-06 27.9 0.1 5.6e-06 26.2 0.0 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|91773812|ref|YP_566504.1| - 5.1e-06 26.3 0.0 1.4e-05 24.9 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|91773812|ref|YP_566504.1| - 2.7e-05 23.6 0.0 5.9e-05 22.5 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|91773812|ref|YP_566504.1| - 7.2e-05 22.6 0.0 0.00015 21.6 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|91773812|ref|YP_566504.1| - 9.5e-05 22.2 0.0 0.00026 20.9 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|91773812|ref|YP_566504.1| - 0.00017 21.3 0.0 0.00033 20.4 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|91773812|ref|YP_566504.1| - 0.00093 19.7 0.0 0.0019 18.7 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain GntR PF00392.21 gi|91773812|ref|YP_566504.1| - 0.0024 17.5 0.0 0.0047 16.6 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 gi|91773812|ref|YP_566504.1| - 0.0034 17.7 0.0 0.032 14.6 0.0 2.3 2 0 0 2 2 2 1 Transcriptional regulator LexA_DNA_bind PF01726.16 gi|91773812|ref|YP_566504.1| - 0.0037 17.0 0.0 0.0077 16.0 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain HTH_5 PF01022.20 gi|91773812|ref|YP_566504.1| - 0.0051 16.7 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HrcA_DNA-bdg PF03444.15 gi|91773812|ref|YP_566504.1| - 0.024 14.3 0.0 0.058 13.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding FaeA PF04703.12 gi|91773812|ref|YP_566504.1| - 0.038 14.4 0.0 0.082 13.3 0.0 1.6 1 0 0 1 1 1 0 FaeA-like protein HTH_36 PF13730.6 gi|91773812|ref|YP_566504.1| - 0.04 13.9 0.1 0.6 10.1 0.0 2.3 2 1 0 2 2 2 0 Helix-turn-helix domain KORA PF16509.5 gi|91773812|ref|YP_566504.1| - 0.058 13.7 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_11 PF08279.12 gi|91773812|ref|YP_566504.1| - 0.064 13.2 0.0 0.18 11.8 0.0 1.8 1 0 0 1 1 1 0 HTH domain DUF2250 PF10007.9 gi|91773812|ref|YP_566504.1| - 0.13 12.4 0.1 0.3 11.2 0.1 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) B-block_TFIIIC PF04182.12 gi|91773812|ref|YP_566504.1| - 0.13 12.4 0.2 7.3 6.8 0.0 2.2 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC MFMR_assoc PF16596.5 gi|91773812|ref|YP_566504.1| - 0.14 12.6 0.2 0.35 11.3 0.2 1.6 1 0 0 1 1 1 0 Disordered region downstream of MFMR FeoB_N PF02421.18 gi|91773813|ref|YP_566505.1| - 4.2e-58 195.3 0.1 6.9e-58 194.6 0.1 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|91773813|ref|YP_566505.1| - 1.4e-25 89.7 25.3 1.5e-14 54.2 7.5 3.1 4 0 0 4 4 4 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|91773813|ref|YP_566505.1| - 7.2e-19 67.9 0.0 1.4e-18 67.0 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|91773813|ref|YP_566505.1| - 6.6e-13 48.1 0.1 6.6e-13 48.1 0.1 2.8 3 0 0 3 3 2 1 Ferrous iron transport protein B C terminus Dynamin_N PF00350.23 gi|91773813|ref|YP_566505.1| - 0.00068 19.7 0.7 0.41 10.7 0.0 2.4 1 1 1 2 2 2 2 Dynamin family AIG1 PF04548.16 gi|91773813|ref|YP_566505.1| - 0.00071 19.0 0.0 0.0012 18.3 0.0 1.3 1 0 0 1 1 1 1 AIG1 family SRPRB PF09439.10 gi|91773813|ref|YP_566505.1| - 0.0037 16.7 0.0 0.007 15.8 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit FeoB_Cyto PF17910.1 gi|91773813|ref|YP_566505.1| - 0.038 14.5 0.1 0.097 13.2 0.1 1.7 1 0 0 1 1 1 0 FeoB cytosolic helical domain ATP_bind_1 PF03029.17 gi|91773813|ref|YP_566505.1| - 0.051 13.3 0.2 0.17 11.7 0.0 1.8 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 gi|91773813|ref|YP_566505.1| - 0.077 12.5 0.0 0.27 10.8 0.0 1.8 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|91773813|ref|YP_566505.1| - 0.16 11.9 0.2 14 5.6 0.0 2.4 2 0 0 2 2 2 0 RsgA GTPase TPD PF14811.6 gi|91773815|ref|YP_566507.1| - 5.8e-50 168.7 0.6 9.1e-50 168.1 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif HhH-GPD PF00730.25 gi|91773816|ref|YP_566508.1| - 1e-17 64.6 0.0 2.4e-17 63.3 0.0 1.6 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein Cnd1 PF12717.7 gi|91773817|ref|YP_566509.1| - 0.054 13.5 0.8 0.074 13.1 0.8 1.2 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 Pribosyltran_N PF13793.6 gi|91773818|ref|YP_566510.1| - 3.3e-26 91.5 0.1 1.4e-24 86.3 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|91773818|ref|YP_566510.1| - 2.5e-21 75.9 0.2 4.5e-21 75.0 0.2 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|91773818|ref|YP_566510.1| - 3.9e-07 30.3 0.6 3.9e-07 30.3 0.6 1.7 2 0 0 2 2 2 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|91773818|ref|YP_566510.1| - 1.1e-06 28.2 0.0 2.3e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|91773818|ref|YP_566510.1| - 0.0007 19.1 0.1 0.005 16.4 0.1 2.1 1 1 1 2 2 2 1 Phosphoribosyl transferase MoaC PF01967.21 gi|91773819|ref|YP_566511.1| - 2.7e-49 166.8 3.5 3e-49 166.6 3.5 1.0 1 0 0 1 1 1 1 MoaC family Carb_kinase PF01256.17 gi|91773821|ref|YP_566513.1| - 1.8e-47 161.9 4.4 2.7e-47 161.3 4.4 1.3 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|91773821|ref|YP_566513.1| - 8.8e-41 139.6 1.2 4.2e-40 137.4 0.2 2.1 2 0 0 2 2 2 1 YjeF-related protein N-terminus HK PF02110.15 gi|91773821|ref|YP_566513.1| - 8e-05 22.1 0.2 0.00023 20.6 0.2 1.8 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family TrkA_N PF02254.18 gi|91773822|ref|YP_566514.1| - 1.1e-22 80.5 0.3 2.3e-22 79.4 0.3 1.6 1 0 0 1 1 1 1 TrkA-N domain DHH PF01368.20 gi|91773822|ref|YP_566514.1| - 5.6e-14 52.2 1.3 5.4e-13 49.0 0.3 2.6 3 0 0 3 3 3 1 DHH family DHHA1 PF02272.19 gi|91773822|ref|YP_566514.1| - 6.7e-13 49.2 0.7 5.3e-12 46.3 0.0 2.6 3 1 0 3 3 3 1 DHHA1 domain F420_oxidored PF03807.17 gi|91773822|ref|YP_566514.1| - 0.0027 18.3 0.0 0.0065 17.0 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 gi|91773822|ref|YP_566514.1| - 0.0031 17.1 0.0 0.0052 16.4 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Epimerase PF01370.21 gi|91773822|ref|YP_566514.1| - 0.0033 16.9 0.0 0.0081 15.6 0.0 1.7 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family TyeA PF09059.10 gi|91773822|ref|YP_566514.1| - 0.0036 17.4 0.0 0.01 15.9 0.0 1.7 1 0 0 1 1 1 1 TyeA 2-Hacid_dh_C PF02826.19 gi|91773822|ref|YP_566514.1| - 0.0044 16.4 0.0 0.0086 15.5 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|91773822|ref|YP_566514.1| - 0.015 15.8 0.0 0.46 11.1 0.0 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|91773822|ref|YP_566514.1| - 0.021 15.1 0.0 0.04 14.2 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 gi|91773822|ref|YP_566514.1| - 0.032 13.9 0.0 0.056 13.1 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 gi|91773822|ref|YP_566514.1| - 0.041 14.3 0.0 0.11 12.9 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding XdhC_C PF13478.6 gi|91773822|ref|YP_566514.1| - 0.078 13.5 0.0 0.22 12.0 0.0 1.9 1 1 0 1 1 1 0 XdhC Rossmann domain FAD_binding_3 PF01494.19 gi|91773822|ref|YP_566514.1| - 0.13 11.5 0.0 0.22 10.7 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain adh_short PF00106.25 gi|91773822|ref|YP_566514.1| - 0.13 11.7 0.0 0.28 10.6 0.0 1.5 1 0 0 1 1 1 0 short chain dehydrogenase CxxCxxCC PF03692.15 gi|91773823|ref|YP_566515.1| - 1.7e-09 38.2 5.2 1.4e-08 35.3 5.2 2.2 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain Aconitase PF00330.20 gi|91773824|ref|YP_566516.1| - 5e-94 315.9 0.3 5e-92 309.3 0.3 2.1 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|91773824|ref|YP_566516.1| - 0.038 12.7 0.0 0.059 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) CBS PF00571.28 gi|91773825|ref|YP_566517.1| - 1.5e-22 79.8 7.7 2.4e-13 50.3 0.7 2.1 2 0 0 2 2 2 2 CBS domain Ribosomal_L9_C PF03948.14 gi|91773825|ref|YP_566517.1| - 0.048 14.1 0.1 0.56 10.7 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein L9, C-terminal domain PRA-PH PF01503.17 gi|91773826|ref|YP_566518.1| - 2.5e-16 59.9 0.2 2.9e-16 59.7 0.2 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|91773826|ref|YP_566518.1| - 9.4e-07 28.9 1.6 1.4e-06 28.3 1.1 1.6 2 0 0 2 2 2 1 MazG nucleotide pyrophosphohydrolase domain HrcA_DNA-bdg PF03444.15 gi|91773827|ref|YP_566519.1| - 2.9e-35 119.8 0.2 8e-35 118.4 0.2 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.28 gi|91773827|ref|YP_566519.1| - 3.1e-21 75.6 7.9 5.6e-12 45.9 1.2 2.6 3 0 0 3 3 3 2 CBS domain Rrf2 PF02082.20 gi|91773827|ref|YP_566519.1| - 1e-07 32.2 0.1 2.4e-07 31.0 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.12 gi|91773827|ref|YP_566519.1| - 3.7e-07 30.0 0.1 8.1e-07 28.9 0.1 1.6 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|91773827|ref|YP_566519.1| - 0.015 15.1 0.1 0.056 13.3 0.0 2.0 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Sigma70_r4_2 PF08281.12 gi|91773827|ref|YP_566519.1| - 0.024 14.3 0.7 0.23 11.2 0.0 2.7 4 0 0 4 4 4 0 Sigma-70, region 4 Aconitase_2_N PF06434.13 gi|91773827|ref|YP_566519.1| - 0.053 13.1 0.2 0.11 12.1 0.1 1.5 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus HTH_IclR PF09339.10 gi|91773827|ref|YP_566519.1| - 0.069 13.0 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain NOG1_N PF17835.1 gi|91773828|ref|YP_566520.1| - 2.2e-47 161.0 0.7 5.2e-47 159.8 0.0 1.7 2 0 0 2 2 2 1 NOG1 N-terminal helical domain NOG1 PF06858.14 gi|91773828|ref|YP_566520.1| - 2.6e-22 78.3 0.3 6.3e-22 77.1 0.3 1.7 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 gi|91773828|ref|YP_566520.1| - 5.2e-19 68.4 0.0 1.8e-18 66.7 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|91773828|ref|YP_566520.1| - 3.7e-10 39.5 0.0 9e-10 38.3 0.0 1.7 2 0 0 2 2 2 1 Ferrous iron transport protein B AAA_24 PF13479.6 gi|91773828|ref|YP_566520.1| - 0.015 15.0 0.1 0.37 10.5 0.0 2.3 1 1 0 2 2 2 0 AAA domain Sushi_2 PF09014.10 gi|91773828|ref|YP_566520.1| - 0.098 12.6 0.0 0.43 10.5 0.0 1.9 1 1 1 2 2 2 0 Beta-2-glycoprotein-1 fifth domain KTI12 PF08433.10 gi|91773828|ref|YP_566520.1| - 0.11 11.9 0.5 12 5.3 0.0 2.2 2 0 0 2 2 2 0 Chromatin associated protein KTI12 Dynamin_N PF00350.23 gi|91773828|ref|YP_566520.1| - 0.58 10.2 3.4 4.4 7.3 0.0 2.7 2 1 1 3 3 3 0 Dynamin family Aminotran_1_2 PF00155.21 gi|91773829|ref|YP_566521.1| - 1.4e-66 225.2 0.0 1.6e-66 225.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|91773829|ref|YP_566521.1| - 2.6e-10 39.8 0.1 5.1e-10 38.9 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|91773829|ref|YP_566521.1| - 8.8e-10 38.4 0.0 1.7e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|91773829|ref|YP_566521.1| - 1.5e-08 33.6 0.0 2.2e-08 33.1 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|91773829|ref|YP_566521.1| - 6.1e-05 22.4 0.0 0.0001 21.7 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_3 PF00202.21 gi|91773829|ref|YP_566521.1| - 0.039 12.6 0.1 0.15 10.6 0.1 1.9 1 1 0 1 1 1 0 Aminotransferase class-III SIS PF01380.22 gi|91773830|ref|YP_566522.1| - 5.4e-17 61.9 0.1 2.3e-16 59.8 0.0 1.8 2 0 0 2 2 2 1 SIS domain SIS_2 PF13580.6 gi|91773830|ref|YP_566522.1| - 0.00043 20.3 1.8 0.06 13.4 0.1 2.2 1 1 1 2 2 2 2 SIS domain DUF4788 PF16032.5 gi|91773830|ref|YP_566522.1| - 0.11 11.4 0.0 5.9 5.8 0.0 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4788) DUF4941 PF16299.5 gi|91773831|ref|YP_566523.1| - 0.0064 15.9 0.0 0.015 14.7 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4941) DUF2073 PF09846.9 gi|91773832|ref|YP_566524.1| - 9e-46 154.1 0.6 1.1e-45 153.8 0.6 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2073) MMR_HSR1 PF01926.23 gi|91773833|ref|YP_566525.1| - 6.4e-17 61.7 0.0 8.6e-17 61.3 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 gi|91773833|ref|YP_566525.1| - 1.7e-15 57.1 0.5 1.3e-06 28.1 0.1 2.9 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|91773833|ref|YP_566525.1| - 3.4e-07 30.3 0.1 0.029 14.3 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase Arf PF00025.21 gi|91773833|ref|YP_566525.1| - 5e-07 29.3 0.0 0.0089 15.5 0.0 2.3 2 0 0 2 2 2 2 ADP-ribosylation factor family Roc PF08477.13 gi|91773833|ref|YP_566525.1| - 2e-05 24.8 0.0 0.0074 16.5 0.0 2.2 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase FeoB_N PF02421.18 gi|91773833|ref|YP_566525.1| - 0.00015 21.3 0.4 0.0032 17.0 0.4 2.6 1 1 0 1 1 1 1 Ferrous iron transport protein B Ras PF00071.22 gi|91773833|ref|YP_566525.1| - 0.00036 20.2 0.0 0.025 14.2 0.0 2.3 2 0 0 2 2 2 1 Ras family Septin PF00735.18 gi|91773833|ref|YP_566525.1| - 0.0008 18.8 0.0 0.0012 18.2 0.0 1.2 1 0 0 1 1 1 1 Septin AAA_24 PF13479.6 gi|91773833|ref|YP_566525.1| - 0.00092 19.0 0.0 0.0023 17.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain SRPRB PF09439.10 gi|91773833|ref|YP_566525.1| - 0.0011 18.4 0.0 0.045 13.2 0.0 2.3 2 1 0 2 2 2 1 Signal recognition particle receptor beta subunit cobW PF02492.19 gi|91773833|ref|YP_566525.1| - 0.0049 16.5 0.0 1.6 8.3 0.0 2.2 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|91773833|ref|YP_566525.1| - 0.0086 16.6 0.0 0.02 15.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain MMR_HSR1_Xtn PF16897.5 gi|91773833|ref|YP_566525.1| - 0.0094 15.9 0.0 0.013 15.5 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain ABC_tran PF00005.27 gi|91773833|ref|YP_566525.1| - 0.0095 16.4 0.0 0.013 16.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA PF00004.29 gi|91773833|ref|YP_566525.1| - 0.0097 16.3 0.1 0.028 14.8 0.1 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|91773833|ref|YP_566525.1| - 0.011 16.2 0.0 0.017 15.5 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|91773833|ref|YP_566525.1| - 0.013 14.7 0.0 0.023 13.9 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain ATPase_2 PF01637.18 gi|91773833|ref|YP_566525.1| - 0.02 14.8 0.0 0.034 14.1 0.0 1.6 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 gi|91773833|ref|YP_566525.1| - 0.021 14.7 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 NTPase NACHT PF05729.12 gi|91773833|ref|YP_566525.1| - 0.032 14.2 0.0 0.13 12.2 0.0 2.0 1 1 0 1 1 1 0 NACHT domain Dynamin_N PF00350.23 gi|91773833|ref|YP_566525.1| - 0.035 14.2 0.0 5.5 7.0 0.0 2.3 2 0 0 2 2 2 0 Dynamin family Parvo_NS1 PF01057.17 gi|91773833|ref|YP_566525.1| - 0.036 13.2 0.0 0.058 12.5 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 NOG1 PF06858.14 gi|91773833|ref|YP_566525.1| - 0.036 13.8 0.1 0.25 11.2 0.0 2.3 2 1 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) RNA_helicase PF00910.22 gi|91773833|ref|YP_566525.1| - 0.04 14.3 0.0 0.08 13.3 0.0 1.5 1 0 0 1 1 1 0 RNA helicase PPV_E1_C PF00519.17 gi|91773833|ref|YP_566525.1| - 0.095 11.5 0.0 0.13 11.1 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase AAA_25 PF13481.6 gi|91773833|ref|YP_566525.1| - 0.12 12.0 0.0 0.25 10.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain AIG1 PF04548.16 gi|91773833|ref|YP_566525.1| - 0.18 11.1 0.0 0.34 10.2 0.0 1.6 1 1 0 1 1 1 0 AIG1 family PCMT PF01135.19 gi|91773834|ref|YP_566526.1| - 3.5e-71 239.3 0.1 3.8e-71 239.2 0.1 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|91773834|ref|YP_566526.1| - 3.2e-12 46.5 0.0 4.2e-12 46.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91773834|ref|YP_566526.1| - 1.3e-07 32.2 0.0 2.4e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|91773834|ref|YP_566526.1| - 2.1e-06 27.1 0.0 3e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase RrnaAD PF00398.20 gi|91773834|ref|YP_566526.1| - 8.7e-06 25.0 0.0 1.3e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|91773834|ref|YP_566526.1| - 4.6e-05 24.0 0.0 8.7e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|91773834|ref|YP_566526.1| - 6e-05 22.8 0.0 7.9e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltr_RsmB-F PF01189.17 gi|91773834|ref|YP_566526.1| - 0.00015 21.4 0.0 0.00022 21.0 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Ubie_methyltran PF01209.18 gi|91773834|ref|YP_566526.1| - 0.00016 21.1 0.0 0.0002 20.8 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Fibrillarin PF01269.17 gi|91773834|ref|YP_566526.1| - 0.00036 19.7 0.0 0.0005 19.2 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin MTS PF05175.14 gi|91773834|ref|YP_566526.1| - 0.0008 19.0 0.0 0.0013 18.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_24 PF13578.6 gi|91773834|ref|YP_566526.1| - 0.00089 20.3 0.0 0.0015 19.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91773834|ref|YP_566526.1| - 0.0028 17.5 0.0 0.0037 17.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|91773834|ref|YP_566526.1| - 0.0057 16.0 0.0 0.0074 15.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|91773834|ref|YP_566526.1| - 0.012 15.1 0.0 0.017 14.6 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_32 PF13679.6 gi|91773834|ref|YP_566526.1| - 0.016 15.2 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 gi|91773834|ref|YP_566526.1| - 0.036 13.8 0.2 0.053 13.2 0.2 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_12 PF08242.12 gi|91773834|ref|YP_566526.1| - 0.12 13.1 0.0 0.19 12.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain POTRA PF07244.15 gi|91773834|ref|YP_566526.1| - 0.12 12.9 0.0 0.2 12.2 0.0 1.4 1 0 0 1 1 1 0 Surface antigen variable number repeat UPF0020 PF01170.18 gi|91773834|ref|YP_566526.1| - 0.15 11.7 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Elf1 PF05129.13 gi|91773835|ref|YP_566527.1| - 0.00037 20.5 1.2 0.00076 19.5 1.2 1.4 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.6 gi|91773835|ref|YP_566527.1| - 0.0012 19.2 0.9 0.0023 18.3 0.9 1.4 1 0 0 1 1 1 1 Restriction alleviation protein Lar zinc_ribbon_4 PF13717.6 gi|91773835|ref|YP_566527.1| - 0.017 15.0 1.3 0.047 13.6 1.3 1.8 1 0 0 1 1 1 0 zinc-ribbon domain Vps36-NZF-N PF16988.5 gi|91773835|ref|YP_566527.1| - 0.08 12.4 0.9 0.15 11.5 0.9 1.4 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain HypA PF01155.19 gi|91773835|ref|YP_566527.1| - 0.13 12.3 3.2 0.26 11.3 1.5 2.2 2 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CAT_RBD PF03123.15 gi|91773835|ref|YP_566527.1| - 0.19 11.7 0.9 0.53 10.3 0.1 2.2 2 0 0 2 2 2 0 CAT RNA binding domain zf-RING_7 PF02591.15 gi|91773835|ref|YP_566527.1| - 0.41 10.9 0.2 0.41 10.9 0.2 2.6 3 0 0 3 3 3 0 C4-type zinc ribbon domain zf-LITAF-like PF10601.9 gi|91773835|ref|YP_566527.1| - 0.75 10.1 3.2 1.1 9.6 0.4 2.2 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Prok-RING_1 PF14446.6 gi|91773835|ref|YP_566527.1| - 2.3 8.2 5.9 11 6.0 5.9 2.0 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-CSL PF05207.13 gi|91773835|ref|YP_566527.1| - 3.3 7.5 6.5 9.6 6.0 1.1 2.6 1 1 1 2 2 2 0 CSL zinc finger Arginase PF00491.21 gi|91773836|ref|YP_566528.1| - 4.6e-79 265.8 0.0 5.2e-79 265.7 0.0 1.0 1 0 0 1 1 1 1 Arginase family eIF-5a PF01287.20 gi|91773837|ref|YP_566529.1| - 1.3e-08 34.9 0.5 2.8e-08 33.7 0.5 1.6 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|91773837|ref|YP_566529.1| - 4.1e-05 23.5 0.1 6.6e-05 22.9 0.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain Cas_St_Csn2 PF16813.5 gi|91773837|ref|YP_566529.1| - 0.018 14.2 0.1 0.02 14.0 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein Csn2 subfamily St DUF1947 PF09183.10 gi|91773837|ref|YP_566529.1| - 0.024 14.9 0.4 0.23 11.8 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) Peptidase_M10 PF00413.24 gi|91773838|ref|YP_566530.1| - 9.3e-16 58.1 0.0 1.2e-15 57.7 0.0 1.1 1 0 0 1 1 1 1 Matrixin Peptidase_M66 PF10462.9 gi|91773838|ref|YP_566530.1| - 8.1e-05 21.7 0.0 0.00012 21.1 0.0 1.3 1 0 0 1 1 1 1 Peptidase M66 Reprolysin_3 PF13582.6 gi|91773838|ref|YP_566530.1| - 0.0001 22.8 0.0 0.00014 22.4 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.8 gi|91773838|ref|YP_566530.1| - 0.0039 16.8 0.0 0.0049 16.5 0.0 1.2 1 0 0 1 1 1 1 Dual-action HEIGH metallo-peptidase Astacin PF01400.24 gi|91773838|ref|YP_566530.1| - 0.0089 15.7 0.0 0.017 14.8 0.0 1.4 1 0 0 1 1 1 1 Astacin (Peptidase family M12A) DUF4953 PF16313.5 gi|91773838|ref|YP_566530.1| - 0.01 15.1 0.0 0.014 14.7 0.0 1.1 1 0 0 1 1 1 1 Met-zincin DUF3139 PF11337.8 gi|91773838|ref|YP_566530.1| - 0.016 15.8 0.4 5 7.9 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) Reprolysin_4 PF13583.6 gi|91773838|ref|YP_566530.1| - 0.02 14.5 0.0 0.026 14.2 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.8 gi|91773838|ref|YP_566530.1| - 0.028 13.0 0.0 0.041 12.5 0.0 1.1 1 0 0 1 1 1 0 Putative peptidase family Peptidase_M54 PF07998.11 gi|91773838|ref|YP_566530.1| - 0.037 14.0 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Peptidase family M54 Reprolysin_5 PF13688.6 gi|91773838|ref|YP_566530.1| - 0.051 13.7 0.0 0.07 13.3 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 Reprolysin_2 PF13574.6 gi|91773838|ref|YP_566530.1| - 0.09 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like HisKA_2 PF07568.12 gi|91773839|ref|YP_566531.1| - 4.5e-27 93.9 1.7 4.5e-27 93.9 1.7 2.6 3 0 0 3 3 3 1 Histidine kinase Response_reg PF00072.24 gi|91773839|ref|YP_566531.1| - 1.1e-26 93.1 1.3 2.7e-26 91.9 1.3 1.7 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 gi|91773839|ref|YP_566531.1| - 7.4e-11 42.6 0.8 2.3e-10 41.0 0.8 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|91773839|ref|YP_566531.1| - 9.6e-10 38.7 0.0 1.9e-09 37.7 0.0 1.6 1 0 0 1 1 1 1 PAS fold HWE_HK PF07536.14 gi|91773839|ref|YP_566531.1| - 3.7e-06 27.6 0.6 1e-05 26.1 0.2 1.9 2 0 0 2 2 2 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|91773839|ref|YP_566531.1| - 4.5e-06 26.6 0.0 8.7e-06 25.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_9 PF13426.7 gi|91773839|ref|YP_566531.1| - 7.5e-06 26.1 0.6 3.9e-05 23.9 0.1 2.4 2 1 0 2 2 2 1 PAS domain PAS PF00989.25 gi|91773839|ref|YP_566531.1| - 0.0016 18.4 0.0 0.0044 17.0 0.0 1.8 1 0 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.6 gi|91773839|ref|YP_566531.1| - 0.028 14.3 0.0 0.064 13.1 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_3 PF08447.12 gi|91773839|ref|YP_566531.1| - 0.084 13.2 0.0 0.24 11.7 0.0 1.7 1 0 0 1 1 1 0 PAS fold SNase PF00565.17 gi|91773840|ref|YP_566532.1| - 1.1e-22 80.6 0.1 2.5e-22 79.4 0.0 1.6 2 0 0 2 2 2 1 Staphylococcal nuclease homologue tRNA_anti-codon PF01336.25 gi|91773840|ref|YP_566532.1| - 1.1e-07 31.7 0.1 2.3e-07 30.7 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 gi|91773840|ref|YP_566532.1| - 1.8e-05 24.9 0.1 7.1e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA_anti-like PF12869.7 gi|91773840|ref|YP_566532.1| - 0.039 13.6 0.3 1.1 8.8 0.0 2.4 2 0 0 2 2 2 0 tRNA_anti-like Hydrolase PF00702.26 gi|91773841|ref|YP_566533.1| - 4.8e-17 63.0 0.1 4.8e-16 59.7 0.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|91773841|ref|YP_566533.1| - 8.3e-08 32.3 0.1 0.016 14.9 0.1 2.5 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|91773841|ref|YP_566533.1| - 0.0027 17.8 0.1 0.011 15.9 0.1 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|91773841|ref|YP_566533.1| - 0.0093 16.0 0.1 0.018 15.1 0.1 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|91773841|ref|YP_566533.1| - 0.056 13.6 0.0 0.41 10.8 0.0 2.2 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase ABC_tran PF00005.27 gi|91773842|ref|YP_566534.1| - 2.2e-49 167.5 0.0 2.7e-23 83.0 0.0 2.3 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|91773842|ref|YP_566534.1| - 2.4e-06 27.1 0.5 0.0037 16.7 0.2 3.1 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|91773842|ref|YP_566534.1| - 4.6e-05 23.4 0.3 0.15 12.0 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase PRK PF00485.18 gi|91773842|ref|YP_566534.1| - 8.1e-05 22.4 0.1 0.26 11.0 0.0 2.4 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 gi|91773842|ref|YP_566534.1| - 0.00035 21.1 0.1 0.66 10.5 0.0 3.1 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.6 gi|91773842|ref|YP_566534.1| - 0.00054 20.4 0.1 0.22 11.9 0.0 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 gi|91773842|ref|YP_566534.1| - 0.00068 19.5 0.1 1.8 8.3 0.0 3.2 3 1 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|91773842|ref|YP_566534.1| - 0.0008 19.1 0.9 1.1 9.1 0.2 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain PduV-EutP PF10662.9 gi|91773842|ref|YP_566534.1| - 0.0011 18.7 0.2 0.056 13.2 0.0 3.0 3 0 0 3 3 3 1 Ethanolamine utilisation - propanediol utilisation AAA_23 PF13476.6 gi|91773842|ref|YP_566534.1| - 0.0016 18.9 2.6 0.077 13.5 0.2 2.3 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|91773842|ref|YP_566534.1| - 0.0024 18.1 0.6 0.79 10.0 0.0 2.7 2 1 0 2 2 2 1 AAA domain MobB PF03205.14 gi|91773842|ref|YP_566534.1| - 0.0026 17.7 0.1 2.1 8.2 0.0 2.9 3 0 0 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B IstB_IS21 PF01695.17 gi|91773842|ref|YP_566534.1| - 0.0032 17.2 1.3 4.7 6.9 0.0 3.3 3 0 0 3 3 3 1 IstB-like ATP binding protein AAA_30 PF13604.6 gi|91773842|ref|YP_566534.1| - 0.0037 17.0 0.6 0.5 10.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|91773842|ref|YP_566534.1| - 0.0052 16.1 0.2 0.3 10.3 0.1 2.5 2 0 0 2 2 2 1 Zeta toxin ATP-synt_ab PF00006.25 gi|91773842|ref|YP_566534.1| - 0.011 15.4 0.0 1.5 8.4 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_33 PF13671.6 gi|91773842|ref|YP_566534.1| - 0.019 15.1 0.0 6.7 6.9 0.0 2.7 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 gi|91773842|ref|YP_566534.1| - 0.028 14.4 0.2 9.9 6.2 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase PF06745.13 gi|91773842|ref|YP_566534.1| - 0.03 13.7 2.5 1.2 8.4 0.0 3.0 3 0 0 3 3 3 0 KaiC MMR_HSR1 PF01926.23 gi|91773842|ref|YP_566534.1| - 0.038 14.1 1.3 2.5 8.2 0.1 3.3 4 0 0 4 4 3 0 50S ribosome-binding GTPase NB-ARC PF00931.22 gi|91773842|ref|YP_566534.1| - 0.045 12.9 0.9 1.3 8.1 0.0 2.7 3 0 0 3 3 3 0 NB-ARC domain AAA_28 PF13521.6 gi|91773842|ref|YP_566534.1| - 0.075 13.3 0.8 11 6.2 0.1 3.0 4 0 0 4 4 2 0 AAA domain PIF1 PF05970.14 gi|91773842|ref|YP_566534.1| - 0.094 11.9 1.0 4.7 6.3 0.0 2.6 2 1 0 2 2 2 0 PIF1-like helicase Tnp_DNA_bind PF14706.6 gi|91773842|ref|YP_566534.1| - 0.14 12.1 0.1 0.3 11.0 0.1 1.5 1 0 0 1 1 1 0 Transposase DNA-binding CbiA PF01656.23 gi|91773842|ref|YP_566534.1| - 0.31 11.1 1.1 2.5 8.1 0.6 2.7 3 0 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_24 PF13479.6 gi|91773842|ref|YP_566534.1| - 0.35 10.6 1.2 22 4.7 0.3 2.5 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|91773842|ref|YP_566534.1| - 4.3 6.9 6.1 24 4.5 0.0 3.5 4 0 0 4 4 4 0 CobW/HypB/UreG, nucleotide-binding domain Pro_isomerase PF00160.21 gi|91773843|ref|YP_566535.1| - 0.0035 17.6 0.0 24 5.2 0.0 4.3 5 0 0 5 5 5 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Dehydratase_SU PF02287.15 gi|91773843|ref|YP_566535.1| - 0.036 14.2 0.0 7.3 6.7 0.0 2.3 2 0 0 2 2 2 0 Dehydratase small subunit DUF2102 PF09875.9 gi|91773844|ref|YP_566536.1| - 3.6e-41 139.0 0.0 4.9e-41 138.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) DUF2112 PF09885.9 gi|91773845|ref|YP_566537.1| - 3.1e-65 218.6 0.0 3.5e-65 218.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) BcrAD_BadFG PF01869.20 gi|91773846|ref|YP_566538.1| - 1.2e-59 202.1 4.2 1.6e-59 201.6 4.2 1.2 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FGGY_N PF00370.21 gi|91773846|ref|YP_566538.1| - 0.019 14.5 0.5 1.3 8.5 0.5 2.4 1 1 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain Peptidase_M22 PF00814.25 gi|91773846|ref|YP_566538.1| - 0.019 14.6 0.0 5.5 6.6 0.0 2.4 2 0 0 2 2 2 0 Glycoprotease family FtsA PF14450.6 gi|91773846|ref|YP_566538.1| - 0.041 14.3 0.6 0.34 11.4 0.6 2.4 1 1 0 1 1 1 0 Cell division protein FtsA Hydant_A_N PF05378.13 gi|91773846|ref|YP_566538.1| - 0.075 12.7 0.5 0.075 12.7 0.5 1.9 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase N-terminal region DUF2113 PF09886.9 gi|91773847|ref|YP_566539.1| - 5.2e-63 211.7 2.1 5.9e-63 211.6 2.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) vATP-synt_E PF01991.18 gi|91773847|ref|YP_566539.1| - 0.078 12.4 0.1 0.29 10.5 0.0 1.8 2 1 0 2 2 2 0 ATP synthase (E/31 kDa) subunit MCR_C PF04609.12 gi|91773848|ref|YP_566540.1| - 1.4e-124 414.6 0.3 1.7e-124 414.3 0.3 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C CMD PF02627.20 gi|91773849|ref|YP_566541.1| - 1.4e-13 50.7 0.1 2.2e-13 50.1 0.1 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SPP PF06550.11 gi|91773850|ref|YP_566542.1| - 7.4e-98 327.5 25.5 8.7e-98 327.3 25.5 1.0 1 0 0 1 1 1 1 Signal-peptide peptidase, presenilin aspartyl protease Peptidase_A22B PF04258.13 gi|91773850|ref|YP_566542.1| - 2.7e-07 30.4 12.4 4.4e-07 29.7 12.4 1.3 1 0 0 1 1 1 1 Signal peptide peptidase DUF5446 PF17522.2 gi|91773851|ref|YP_566543.1| - 0.0063 16.7 1.9 0.0091 16.1 1.9 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5446) Phage_holin_3_6 PF07332.11 gi|91773851|ref|YP_566543.1| - 0.027 14.5 0.1 0.033 14.2 0.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III PapD_N PF00345.20 gi|91773851|ref|YP_566543.1| - 0.028 14.3 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain DUF3139 PF11337.8 gi|91773851|ref|YP_566543.1| - 0.089 13.4 3.7 1.1 10.0 3.7 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) XPG_I PF00867.18 gi|91773853|ref|YP_566545.1| - 1.1e-27 96.2 0.0 2e-27 95.3 0.0 1.4 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 gi|91773853|ref|YP_566545.1| - 2.2e-21 76.2 0.0 4e-21 75.4 0.0 1.4 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|91773853|ref|YP_566545.1| - 0.0019 18.8 0.0 0.0048 17.5 0.0 1.7 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold iPGM_N PF06415.13 gi|91773854|ref|YP_566546.1| - 4.4e-85 284.5 0.1 6.4e-85 284.0 0.1 1.2 1 0 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Metalloenzyme PF01676.18 gi|91773854|ref|YP_566546.1| - 5.4e-82 274.9 0.1 6.4e-82 274.7 0.1 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily AP_endonuc_2 PF01261.24 gi|91773854|ref|YP_566546.1| - 0.00046 19.7 0.0 0.001 18.6 0.0 1.6 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Phosphodiest PF01663.22 gi|91773854|ref|YP_566546.1| - 0.00081 19.1 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|91773854|ref|YP_566546.1| - 0.0072 15.7 0.0 0.019 14.3 0.0 1.9 2 0 0 2 2 2 1 Sulfatase PglZ PF08665.12 gi|91773854|ref|YP_566546.1| - 0.017 15.2 0.1 0.032 14.3 0.1 1.4 1 0 0 1 1 1 0 PglZ domain PHP PF02811.19 gi|91773854|ref|YP_566546.1| - 0.12 12.6 0.5 1.6 9.0 0.1 2.4 2 1 1 3 3 3 0 PHP domain Baculo_E56 PF04639.12 gi|91773854|ref|YP_566546.1| - 0.18 11.1 0.5 1.9 7.7 0.2 2.3 3 0 0 3 3 3 0 Baculoviral E56 protein, specific to ODV envelope MacB_PCD PF12704.7 gi|91773855|ref|YP_566547.1| - 6.4e-31 108.2 5.8 6.4e-31 108.2 5.8 2.4 2 1 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|91773855|ref|YP_566547.1| - 2.8e-13 50.1 6.5 2.8e-13 50.1 6.5 3.1 3 0 0 3 3 3 2 FtsX-like permease family NPCBM_assoc PF10633.9 gi|91773856|ref|YP_566548.1| - 1.2e-11 44.7 1.5 0.0097 16.1 0.0 4.1 4 1 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|91773856|ref|YP_566548.1| - 3.1e-06 27.4 9.0 0.0086 16.4 0.0 4.8 3 2 0 3 3 3 2 Domain of unknown function DUF11 CARDB PF07705.11 gi|91773856|ref|YP_566548.1| - 4.1e-06 27.0 15.7 0.059 13.6 0.1 4.5 3 1 0 4 4 4 3 CARDB Gram_pos_anchor PF00746.21 gi|91773856|ref|YP_566548.1| - 0.0045 16.9 0.9 0.01 15.7 0.2 2.1 2 0 0 2 2 2 1 LPXTG cell wall anchor motif DUF2393 PF09624.10 gi|91773856|ref|YP_566548.1| - 0.0052 16.8 0.1 0.091 12.8 0.0 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF2393) MG2 PF01835.19 gi|91773856|ref|YP_566548.1| - 0.011 16.2 0.1 18 5.9 0.0 4.0 2 2 2 4 4 4 0 MG2 domain DUF4998 PF16389.5 gi|91773856|ref|YP_566548.1| - 0.052 13.1 6.9 0.27 10.8 0.3 2.8 1 1 1 2 2 2 0 Domain of unknown function ABC_tran PF00005.27 gi|91773857|ref|YP_566549.1| - 4e-31 108.4 0.1 8.1e-31 107.4 0.0 1.6 2 0 0 2 2 1 1 ABC transporter SMC_N PF02463.19 gi|91773857|ref|YP_566549.1| - 1.2e-09 37.9 0.1 3.4e-08 33.2 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|91773857|ref|YP_566549.1| - 1.6e-06 28.2 0.6 0.012 15.4 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|91773857|ref|YP_566549.1| - 0.00015 21.4 0.0 0.0003 20.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|91773857|ref|YP_566549.1| - 0.00082 19.9 1.2 0.0018 18.8 0.0 2.1 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|91773857|ref|YP_566549.1| - 0.0015 18.5 0.0 0.0024 17.8 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_14 PF13173.6 gi|91773857|ref|YP_566549.1| - 0.0093 16.0 0.2 0.042 13.9 0.0 2.1 2 1 0 3 3 3 1 AAA domain AAA_16 PF13191.6 gi|91773857|ref|YP_566549.1| - 0.017 15.5 0.0 0.029 14.8 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 gi|91773857|ref|YP_566549.1| - 0.034 13.9 0.0 0.16 11.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 gi|91773857|ref|YP_566549.1| - 0.045 12.4 0.1 0.86 8.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|91773857|ref|YP_566549.1| - 0.047 14.2 0.0 0.9 10.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|91773857|ref|YP_566549.1| - 0.048 13.6 0.2 0.3 11.0 0.2 2.2 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|91773857|ref|YP_566549.1| - 0.056 13.7 0.0 0.16 12.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain TTRAP PF14203.6 gi|91773857|ref|YP_566549.1| - 0.06 13.3 0.1 0.2 11.6 0.1 1.9 1 0 0 1 1 1 0 Putative tranposon-transfer assisting protein NTPase_1 PF03266.15 gi|91773857|ref|YP_566549.1| - 0.064 13.2 0.5 12 5.7 0.1 2.3 2 0 0 2 2 2 0 NTPase MMR_HSR1 PF01926.23 gi|91773857|ref|YP_566549.1| - 0.13 12.3 0.6 0.37 10.9 0.6 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase IstB_IS21 PF01695.17 gi|91773857|ref|YP_566549.1| - 0.14 11.9 0.0 1.7 8.4 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein HTH_24 PF13412.6 gi|91773858|ref|YP_566550.1| - 1.1e-06 28.1 0.0 1.6e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|91773858|ref|YP_566550.1| - 0.00011 22.0 0.0 0.00021 21.1 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|91773858|ref|YP_566550.1| - 0.0002 21.2 0.0 0.00035 20.4 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|91773858|ref|YP_566550.1| - 0.00026 20.8 0.0 0.00056 19.8 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|91773858|ref|YP_566550.1| - 0.00029 20.9 0.0 0.00085 19.5 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain CarboxypepD_reg PF13620.6 gi|91773858|ref|YP_566550.1| - 0.0021 18.3 0.0 0.0039 17.4 0.0 1.5 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain REJ PF02010.15 gi|91773858|ref|YP_566550.1| - 0.0024 16.7 0.3 0.0033 16.3 0.3 1.1 1 0 0 1 1 1 1 REJ domain DUF5305 PF17231.2 gi|91773858|ref|YP_566550.1| - 0.0043 16.5 1.8 0.0066 15.9 1.8 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5305) Penicillinase_R PF03965.16 gi|91773858|ref|YP_566550.1| - 0.0049 17.2 0.0 0.0092 16.3 0.0 1.4 1 0 0 1 1 1 1 Penicillinase repressor HTH_27 PF13463.6 gi|91773858|ref|YP_566550.1| - 0.0055 17.2 0.1 0.011 16.2 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|91773858|ref|YP_566550.1| - 0.025 14.6 0.0 0.046 13.7 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|91773858|ref|YP_566550.1| - 0.037 13.9 0.0 0.063 13.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|91773858|ref|YP_566550.1| - 0.058 13.2 0.0 0.093 12.6 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain CarbopepD_reg_2 PF13715.6 gi|91773858|ref|YP_566550.1| - 0.058 13.4 0.1 0.12 12.4 0.1 1.6 1 0 0 1 1 1 0 CarboxypepD_reg-like domain GpcrRhopsn4 PF10192.9 gi|91773858|ref|YP_566550.1| - 0.073 12.5 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 Rhodopsin-like GPCR transmembrane domain Zip PF02535.22 gi|91773858|ref|YP_566550.1| - 0.083 12.1 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter FeoC PF09012.10 gi|91773858|ref|YP_566550.1| - 0.16 12.0 0.2 0.27 11.3 0.2 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator DUF4969 PF16339.5 gi|91773859|ref|YP_566551.1| - 0.0018 18.6 1.3 0.14 12.5 0.0 3.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4969) YqeY PF09424.10 gi|91773859|ref|YP_566551.1| - 0.0061 16.6 3.2 0.037 14.1 0.5 2.2 1 1 1 2 2 2 1 Yqey-like protein DUF2031 PF09592.10 gi|91773860|ref|YP_566552.1| - 0.0039 16.7 1.0 0.006 16.1 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2031) TIR_2 PF13676.6 gi|91773861|ref|YP_566553.1| - 6.3e-13 49.4 0.0 5.2e-12 46.4 0.0 2.5 2 0 0 2 2 2 1 TIR domain TIR PF01582.20 gi|91773861|ref|YP_566553.1| - 2.8e-07 30.5 0.7 3.8e-06 26.8 0.1 2.6 2 0 0 2 2 2 1 TIR domain ATPase_2 PF01637.18 gi|91773861|ref|YP_566553.1| - 6.6e-06 26.2 1.4 6.6e-06 26.2 1.4 3.6 3 1 1 4 4 4 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|91773861|ref|YP_566553.1| - 0.00022 21.2 0.3 0.00022 21.2 0.3 3.7 3 1 0 3 3 3 1 AAA domain AAA PF00004.29 gi|91773861|ref|YP_566553.1| - 0.00031 21.2 0.6 0.0044 17.4 0.0 3.0 2 1 1 3 3 3 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|91773861|ref|YP_566553.1| - 0.01 15.8 0.3 0.03 14.2 0.0 2.0 2 0 0 2 2 2 0 NTPase AAA_7 PF12775.7 gi|91773861|ref|YP_566553.1| - 0.013 15.0 0.1 0.034 13.7 0.1 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 gi|91773861|ref|YP_566553.1| - 0.013 15.8 0.1 0.071 13.4 0.1 2.2 1 1 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 gi|91773861|ref|YP_566553.1| - 0.016 14.9 0.2 0.073 12.7 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase Roc PF08477.13 gi|91773861|ref|YP_566553.1| - 0.032 14.4 0.4 0.12 12.6 0.1 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase NB-ARC PF00931.22 gi|91773861|ref|YP_566553.1| - 0.041 13.1 0.1 0.041 13.1 0.1 2.2 3 0 0 3 3 3 0 NB-ARC domain AAA_18 PF13238.6 gi|91773861|ref|YP_566553.1| - 0.063 13.8 5.5 0.078 13.5 0.1 3.4 3 1 1 4 4 4 0 AAA domain Zeta_toxin PF06414.12 gi|91773861|ref|YP_566553.1| - 0.11 11.7 0.0 4.5 6.5 0.0 2.5 2 0 0 2 2 2 0 Zeta toxin RNA_helicase PF00910.22 gi|91773861|ref|YP_566553.1| - 0.13 12.6 0.1 0.13 12.6 0.1 3.1 4 0 0 4 4 4 0 RNA helicase DUF772 PF05598.11 gi|91773862|ref|YP_566554.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91773862|ref|YP_566554.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91773862|ref|YP_566554.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91773862|ref|YP_566554.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91773862|ref|YP_566554.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease Methyltransf_25 PF13649.6 gi|91773863|ref|YP_566555.1| - 3.1e-12 47.0 0.0 5.7e-12 46.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91773863|ref|YP_566555.1| - 1e-09 38.5 0.0 1.4e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|91773863|ref|YP_566555.1| - 1.9e-08 33.7 0.0 2.8e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_12 PF08242.12 gi|91773863|ref|YP_566555.1| - 6.1e-08 33.3 0.0 1e-07 32.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|91773863|ref|YP_566555.1| - 6.2e-08 33.2 0.0 1.5e-07 32.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91773863|ref|YP_566555.1| - 1.1e-07 31.8 0.0 2e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|91773863|ref|YP_566555.1| - 7.4e-06 25.9 0.0 1.2e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|91773863|ref|YP_566555.1| - 1.3e-05 24.6 0.0 2.2e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_16 PF10294.9 gi|91773863|ref|YP_566555.1| - 1.6e-05 24.7 0.2 2.7e-05 24.0 0.2 1.3 1 0 0 1 1 1 1 Lysine methyltransferase GidB PF02527.15 gi|91773863|ref|YP_566555.1| - 1.9e-05 24.1 0.0 2.7e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Cons_hypoth95 PF03602.15 gi|91773863|ref|YP_566555.1| - 4.4e-05 23.2 0.0 6.4e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|91773863|ref|YP_566555.1| - 0.00017 21.1 0.0 0.00028 20.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|91773863|ref|YP_566555.1| - 0.00023 20.6 0.0 0.00038 19.8 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|91773863|ref|YP_566555.1| - 0.00086 18.8 1.3 0.0016 17.9 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltr_RsmB-F PF01189.17 gi|91773863|ref|YP_566555.1| - 0.001 18.8 0.0 0.0016 18.1 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Fibrillarin PF01269.17 gi|91773863|ref|YP_566555.1| - 0.0012 18.0 0.0 0.0018 17.4 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin Met_10 PF02475.16 gi|91773863|ref|YP_566555.1| - 0.0028 17.4 0.0 0.0076 16.0 0.0 1.7 1 1 0 1 1 1 1 Met-10+ like-protein DREV PF05219.12 gi|91773863|ref|YP_566555.1| - 0.0034 16.5 0.0 0.0051 16.0 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase tRNA_U5-meth_tr PF05958.11 gi|91773863|ref|YP_566555.1| - 0.0068 15.4 0.0 0.01 14.8 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_18 PF12847.7 gi|91773863|ref|YP_566555.1| - 0.007 16.3 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|91773863|ref|YP_566555.1| - 0.016 14.6 0.0 0.03 13.7 0.0 1.4 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_4 PF02390.17 gi|91773863|ref|YP_566555.1| - 0.047 13.2 0.0 0.073 12.5 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase FtsJ PF01728.19 gi|91773863|ref|YP_566555.1| - 0.05 13.7 0.0 0.076 13.1 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_2 PF00891.18 gi|91773863|ref|YP_566555.1| - 0.053 12.8 0.0 0.2 10.9 0.0 1.8 2 0 0 2 2 2 0 O-methyltransferase domain Methyltransf_15 PF09445.10 gi|91773863|ref|YP_566555.1| - 0.067 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase MatE PF01554.18 gi|91773864|ref|YP_566556.1| - 2.7e-56 189.7 47.9 8.2e-32 110.1 17.9 2.6 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|91773864|ref|YP_566556.1| - 2.7e-14 53.5 23.7 8.7e-12 45.3 14.9 4.7 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain DDE_Tnp_1_5 PF13737.6 gi|91773864|ref|YP_566556.1| - 0.059 13.7 0.1 12 6.2 0.0 2.5 2 0 0 2 2 2 0 Transposase DDE domain UbiA PF01040.18 gi|91773865|ref|YP_566557.1| - 1.1e-16 60.9 8.3 1.7e-16 60.3 8.3 1.3 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF3488 PF11992.8 gi|91773865|ref|YP_566557.1| - 0.055 12.4 0.4 0.11 11.4 0.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF1724 PF08350.10 gi|91773866|ref|YP_566558.1| - 9e-23 80.2 0.1 1.9e-22 79.2 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) MarR_2 PF12802.7 gi|91773866|ref|YP_566558.1| - 0.00077 19.3 0.0 0.0014 18.5 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|91773866|ref|YP_566558.1| - 0.0014 18.4 0.0 0.0026 17.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|91773866|ref|YP_566558.1| - 0.0045 16.9 0.0 0.01 15.7 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.6 gi|91773866|ref|YP_566558.1| - 0.013 15.5 0.1 0.11 12.5 0.0 2.3 2 1 0 2 2 2 0 Winged helix-turn-helix HTH_11 PF08279.12 gi|91773866|ref|YP_566558.1| - 0.025 14.5 0.0 0.051 13.5 0.0 1.5 1 0 0 1 1 1 0 HTH domain Transcrip_act PF04949.13 gi|91773866|ref|YP_566558.1| - 0.052 13.4 1.5 2.6 7.9 0.3 2.4 2 0 0 2 2 2 0 Transcriptional activator HTH_20 PF12840.7 gi|91773866|ref|YP_566558.1| - 0.066 13.3 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain PTSIIA_gutA PF03829.13 gi|91773866|ref|YP_566558.1| - 0.13 12.1 0.0 0.32 10.9 0.0 1.6 2 0 0 2 2 2 0 PTS system glucitol/sorbitol-specific IIA component AICARFT_IMPCHas PF01808.18 gi|91773867|ref|YP_566559.1| - 1.2e-98 330.2 0.0 1.5e-98 329.9 0.0 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 gi|91773867|ref|YP_566559.1| - 1.1e-26 92.8 0.0 2.3e-26 91.8 0.0 1.6 1 0 0 1 1 1 1 MGS-like domain TGT_C2 PF14810.6 gi|91773867|ref|YP_566559.1| - 0.1 12.7 0.0 0.24 11.6 0.0 1.6 1 0 0 1 1 1 0 Patch-forming domain C2 of tRNA-guanine transglycosylase PAPS_reduct PF01507.19 gi|91773868|ref|YP_566560.1| - 1.6e-43 148.8 0.0 2.5e-43 148.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.20 gi|91773868|ref|YP_566560.1| - 1.5e-18 66.5 0.4 5.2e-18 64.8 0.1 2.0 2 0 0 2 2 2 1 PUA domain Fer4 PF00037.27 gi|91773868|ref|YP_566560.1| - 2.5e-08 33.4 26.1 6.8e-06 25.7 4.3 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91773868|ref|YP_566560.1| - 2e-06 27.8 15.8 2e-06 27.8 15.8 2.4 3 0 0 3 3 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91773868|ref|YP_566560.1| - 3.2e-06 26.9 12.3 0.0016 18.4 2.3 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91773868|ref|YP_566560.1| - 6.9e-06 26.1 14.8 6.9e-06 26.1 14.8 2.1 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91773868|ref|YP_566560.1| - 2.1e-05 25.0 16.0 2.1e-05 25.0 16.0 2.4 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91773868|ref|YP_566560.1| - 0.00012 22.0 3.3 0.00012 22.0 3.3 2.8 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91773868|ref|YP_566560.1| - 0.00019 21.8 12.3 0.017 15.5 2.4 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91773868|ref|YP_566560.1| - 0.00053 20.1 7.8 0.00053 20.1 7.8 2.2 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91773868|ref|YP_566560.1| - 0.0019 18.7 12.4 0.063 13.8 0.8 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91773868|ref|YP_566560.1| - 0.0028 18.0 3.6 0.0028 18.0 3.6 3.7 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91773868|ref|YP_566560.1| - 0.0038 17.3 18.5 0.0038 17.3 18.5 3.2 4 1 1 5 5 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91773868|ref|YP_566560.1| - 0.0079 17.1 5.6 0.0079 17.1 5.6 3.0 2 0 0 2 2 2 1 4Fe-4S binding domain UPF0113 PF03657.13 gi|91773868|ref|YP_566560.1| - 0.064 13.5 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 UPF0113 PUA domain Fer4_13 PF13370.6 gi|91773868|ref|YP_566560.1| - 1 9.9 15.5 0.61 10.7 4.3 2.7 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 gi|91773868|ref|YP_566560.1| - 6.4 7.8 24.5 0.52 11.3 2.4 3.1 2 1 2 4 4 3 0 4Fe-4S double cluster binding domain Cas_Cas4 PF01930.17 gi|91773869|ref|YP_566561.1| - 2.7e-11 43.8 3.1 1.3e-09 38.3 0.2 2.4 1 1 0 2 2 2 2 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|91773869|ref|YP_566561.1| - 1.1e-05 25.5 0.7 0.00012 22.1 0.7 2.0 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily VASP_tetra PF08776.11 gi|91773869|ref|YP_566561.1| - 0.049 13.2 1.6 0.12 12.0 0.4 2.2 2 0 0 2 2 2 0 VASP tetramerisation domain HTH_3 PF01381.22 gi|91773870|ref|YP_566562.1| - 1.6e-06 28.0 0.0 5.8e-06 26.3 0.0 2.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|91773870|ref|YP_566562.1| - 0.00024 21.0 0.0 0.0012 18.9 0.0 2.2 2 1 1 3 3 3 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|91773870|ref|YP_566562.1| - 0.04 14.3 0.0 0.089 13.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain ACP_syn_III_C PF08541.10 gi|91773871|ref|YP_566563.1| - 1.1e-10 41.5 0.0 3.2e-10 40.0 0.0 1.8 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.10 gi|91773871|ref|YP_566563.1| - 1.8e-05 24.5 0.0 0.00032 20.4 0.0 2.1 1 1 1 2 2 2 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.17 gi|91773871|ref|YP_566563.1| - 0.00028 20.8 0.4 0.00037 20.4 0.4 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal Thiolase_N PF00108.23 gi|91773871|ref|YP_566563.1| - 0.019 14.3 0.6 0.035 13.5 0.6 1.3 1 0 0 1 1 1 0 Thiolase, N-terminal domain Thiolase_N PF00108.23 gi|91773872|ref|YP_566564.1| - 1.9e-23 83.2 5.2 6.3e-23 81.5 5.2 1.9 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|91773872|ref|YP_566564.1| - 3e-11 43.1 1.5 4e-10 39.4 1.3 2.5 1 1 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|91773872|ref|YP_566564.1| - 8.2e-08 32.1 7.5 3.8e-06 26.7 7.5 2.6 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|91773872|ref|YP_566564.1| - 0.0012 18.9 0.3 0.36 10.8 0.1 3.1 2 0 0 2 2 2 2 Beta-ketoacyl synthase, C-terminal domain OB_aCoA_assoc PF01796.17 gi|91773873|ref|YP_566565.1| - 2e-18 66.1 0.1 2.9e-18 65.6 0.1 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|91773873|ref|YP_566565.1| - 3.2e-11 42.9 1.4 4.5e-11 42.4 1.4 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) FdhE PF04216.12 gi|91773873|ref|YP_566565.1| - 0.031 14.2 0.2 0.036 13.9 0.2 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zinc-ribbons_6 PF07191.12 gi|91773873|ref|YP_566565.1| - 0.045 13.7 0.3 0.069 13.1 0.3 1.3 1 0 0 1 1 1 0 zinc-ribbons Sar8_2 PF03058.14 gi|91773873|ref|YP_566565.1| - 0.098 13.2 0.4 0.16 12.5 0.4 1.3 1 0 0 1 1 1 0 Sar8.2 family CxC5 PF18718.1 gi|91773873|ref|YP_566565.1| - 0.38 10.8 4.5 1 9.4 4.6 1.7 1 1 0 1 1 1 0 CxC5 like cysteine cluster associated with KDZ transposases CYTH PF01928.21 gi|91773874|ref|YP_566566.1| - 3.9e-33 114.9 1.6 4.4e-33 114.7 1.6 1.0 1 0 0 1 1 1 1 CYTH domain tRNA-synt_1g PF09334.11 gi|91773875|ref|YP_566567.1| - 3.2e-148 493.7 0.1 4.3e-148 493.2 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|91773875|ref|YP_566567.1| - 2.4e-26 91.7 0.5 6.3e-26 90.3 0.5 1.8 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 gi|91773875|ref|YP_566567.1| - 7e-20 70.8 0.0 7.1e-10 37.8 0.0 4.1 2 1 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|91773875|ref|YP_566567.1| - 4.2e-19 69.0 4.9 8e-19 68.1 4.9 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|91773875|ref|YP_566567.1| - 1.8e-13 50.5 0.4 2e-09 37.2 0.0 2.7 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|91773875|ref|YP_566567.1| - 0.0019 17.2 0.0 0.17 10.8 0.0 2.5 2 0 0 2 2 2 1 tRNA synthetases class I (K) TackOD1 PF18551.1 gi|91773875|ref|YP_566567.1| - 0.028 14.1 0.8 0.063 12.9 0.8 1.5 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 zinc-ribbons_6 PF07191.12 gi|91773875|ref|YP_566567.1| - 1.7 8.7 9.2 5.2 7.1 8.7 2.0 1 1 0 1 1 1 0 zinc-ribbons DZR PF12773.7 gi|91773875|ref|YP_566567.1| - 3.7 7.6 11.1 1.3 9.1 3.7 2.4 1 1 1 2 2 2 0 Double zinc ribbon Peptidase_S49 PF01343.18 gi|91773876|ref|YP_566568.1| - 2e-43 148.0 0.1 2.8e-43 147.5 0.1 1.2 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.23 gi|91773876|ref|YP_566568.1| - 0.00032 20.6 0.7 0.0055 16.6 0.1 2.3 2 0 0 2 2 2 1 Clp protease Ligase_CoA PF00549.19 gi|91773876|ref|YP_566568.1| - 0.00097 19.0 0.3 0.0048 16.7 0.1 2.2 3 0 0 3 3 3 1 CoA-ligase IF-2B PF01008.17 gi|91773877|ref|YP_566569.1| - 5.5e-87 291.5 4.0 6.3e-87 291.3 4.0 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family Aldedh PF00171.22 gi|91773879|ref|YP_566571.1| - 6.5e-138 460.1 0.0 7.4e-138 459.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family tRNA_deacylase PF04414.12 gi|91773880|ref|YP_566572.1| - 7.3e-65 218.3 0.0 9.6e-65 217.9 0.0 1.2 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase MmcB-like PF06319.12 gi|91773880|ref|YP_566572.1| - 0.17 11.5 0.0 0.37 10.4 0.0 1.5 1 0 0 1 1 1 0 DNA repair protein MmcB-like Tubulin PF00091.25 gi|91773881|ref|YP_566573.1| - 1.2e-41 143.2 0.2 1.7e-41 142.6 0.2 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|91773881|ref|YP_566573.1| - 4e-35 120.0 0.4 1.3e-34 118.4 0.4 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain NAD_binding_10 PF13460.6 gi|91773881|ref|YP_566573.1| - 0.02 14.8 2.4 0.039 13.9 0.2 2.2 2 0 0 2 2 2 0 NAD(P)H-binding Tubulin_2 PF13809.6 gi|91773881|ref|YP_566573.1| - 1.2 8.3 4.3 0.93 8.6 2.1 1.9 2 1 0 2 2 2 0 Tubulin like SecE PF00584.20 gi|91773882|ref|YP_566574.1| - 4.3e-06 26.6 0.6 4.6e-06 26.4 0.6 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Spt5-NGN PF03439.13 gi|91773883|ref|YP_566575.1| - 4.3e-26 90.6 0.2 6.3e-26 90.1 0.2 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|91773883|ref|YP_566575.1| - 5.1e-07 29.4 1.0 8.1e-06 25.6 0.3 2.5 2 0 0 2 2 2 1 KOW motif NusG PF02357.19 gi|91773883|ref|YP_566575.1| - 0.13 12.8 0.0 4 8.0 0.0 2.5 1 1 0 1 1 1 0 Transcription termination factor nusG Ribosomal_L11_N PF03946.14 gi|91773884|ref|YP_566576.1| - 1.4e-26 92.1 1.9 4.4e-26 90.5 0.8 2.0 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|91773884|ref|YP_566576.1| - 9.1e-22 77.3 1.0 3e-21 75.7 0.8 1.8 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain Ribosomal_L1 PF00687.21 gi|91773885|ref|YP_566577.1| - 4.4e-47 160.5 0.1 5.3e-47 160.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L10 PF00466.20 gi|91773886|ref|YP_566578.1| - 2.5e-24 85.3 2.0 1.4e-23 82.9 0.0 2.5 3 0 0 3 3 3 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|91773886|ref|YP_566578.1| - 1.7e-17 63.2 0.1 3.6e-17 62.1 0.1 1.5 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|91773886|ref|YP_566578.1| - 2.7e-05 24.7 14.1 0.00013 22.5 14.1 2.2 1 1 0 1 1 1 1 60s Acidic ribosomal protein GLE1 PF07817.13 gi|91773886|ref|YP_566578.1| - 0.051 12.8 0.1 0.073 12.3 0.1 1.3 1 0 0 1 1 1 0 GLE1-like protein Ribosomal_60s PF00428.19 gi|91773887|ref|YP_566579.1| - 6.3e-15 55.5 17.3 7.5e-15 55.3 17.3 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein DUF4013 PF13197.6 gi|91773888|ref|YP_566580.1| - 9.5 6.0 49.3 0.013 15.4 28.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4013) DEAD PF00270.29 gi|91773889|ref|YP_566581.1| - 1.8e-52 177.6 0.1 5.5e-52 176.1 0.0 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|91773889|ref|YP_566581.1| - 3e-31 108.0 0.1 1.6e-28 99.3 0.0 2.6 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|91773889|ref|YP_566581.1| - 1.6e-09 38.0 0.0 3e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 gi|91773889|ref|YP_566581.1| - 0.00038 19.7 0.1 0.00061 19.1 0.1 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Helicase_RecD PF05127.14 gi|91773889|ref|YP_566581.1| - 0.0049 16.8 0.0 0.01 15.7 0.0 1.5 1 0 0 1 1 1 1 Helicase AAA_30 PF13604.6 gi|91773889|ref|YP_566581.1| - 0.009 15.7 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain UTP25 PF06862.12 gi|91773889|ref|YP_566581.1| - 0.014 14.2 0.8 3.1 6.5 0.1 3.4 2 1 1 3 3 3 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 CMS1 PF14617.6 gi|91773889|ref|YP_566581.1| - 0.017 14.5 0.0 0.057 12.8 0.0 1.9 2 0 0 2 2 2 0 U3-containing 90S pre-ribosomal complex subunit PRAI PF00697.22 gi|91773889|ref|YP_566581.1| - 0.021 14.6 0.1 0.039 13.7 0.1 1.4 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Flavi_DEAD PF07652.14 gi|91773889|ref|YP_566581.1| - 0.054 13.5 0.1 0.17 11.8 0.0 1.8 2 0 0 2 2 2 0 Flavivirus DEAD domain UvrD-helicase PF00580.21 gi|91773889|ref|YP_566581.1| - 0.067 12.7 0.1 0.093 12.2 0.1 1.3 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|91773889|ref|YP_566581.1| - 0.15 12.4 0.1 0.28 11.5 0.0 1.5 2 0 0 2 2 2 0 AAA domain Radical_SAM PF04055.21 gi|91773890|ref|YP_566582.1| - 6.6e-15 55.9 0.0 1.9e-14 54.4 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily DUF3463 PF11946.8 gi|91773890|ref|YP_566582.1| - 2.5e-05 24.1 0.2 4.4e-05 23.3 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3463) Nit_Regul_Hom PF10126.9 gi|91773890|ref|YP_566582.1| - 0.034 14.2 0.3 9.6 6.3 0.0 2.4 1 1 1 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII Fer4_12 PF13353.6 gi|91773890|ref|YP_566582.1| - 0.26 11.5 0.1 0.26 11.5 0.1 2.4 3 1 0 3 3 3 0 4Fe-4S single cluster domain SSF PF00474.17 gi|91773891|ref|YP_566583.1| - 1.1e-33 116.7 35.3 1.8e-33 116.0 35.3 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family DUF2206 PF09971.9 gi|91773892|ref|YP_566584.1| - 0.018 13.8 0.5 0.032 13.0 0.5 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) Lactamase_B_2 PF12706.7 gi|91773893|ref|YP_566585.1| - 1.5e-30 106.2 0.7 2e-30 105.9 0.7 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|91773893|ref|YP_566585.1| - 3.3e-20 72.9 1.2 4.7e-20 72.4 1.2 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|91773893|ref|YP_566585.1| - 9.3e-08 32.1 1.1 1.8e-07 31.2 1.1 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain V-ATPase_H_C PF11698.8 gi|91773893|ref|YP_566585.1| - 0.068 13.3 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 V-ATPase subunit H DDR PF08841.10 gi|91773893|ref|YP_566585.1| - 0.078 11.9 0.1 0.11 11.5 0.1 1.1 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain AAA PF00004.29 gi|91773894|ref|YP_566586.1| - 4.9e-36 124.1 0.0 1.6e-35 122.4 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|91773894|ref|YP_566586.1| - 6.1e-09 35.5 0.0 1.6e-08 34.2 0.0 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 gi|91773894|ref|YP_566586.1| - 1.6e-07 31.4 0.1 4e-06 26.9 0.0 2.6 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) DUF815 PF05673.13 gi|91773894|ref|YP_566586.1| - 7.5e-05 22.0 0.0 0.00014 21.1 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 gi|91773894|ref|YP_566586.1| - 0.00022 21.8 0.0 0.00063 20.3 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_16 PF13191.6 gi|91773894|ref|YP_566586.1| - 0.00027 21.4 0.3 0.012 16.0 0.3 2.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|91773894|ref|YP_566586.1| - 0.0003 20.9 0.0 0.00064 19.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|91773894|ref|YP_566586.1| - 0.00083 19.6 0.3 0.064 13.5 0.0 2.8 2 1 1 3 3 3 1 AAA domain RuvB_N PF05496.12 gi|91773894|ref|YP_566586.1| - 0.00084 19.1 0.0 0.0016 18.2 0.0 1.5 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 gi|91773894|ref|YP_566586.1| - 0.00093 18.5 0.0 0.0018 17.5 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain SKI PF01202.22 gi|91773894|ref|YP_566586.1| - 0.001 19.2 0.0 0.043 13.9 0.0 2.8 2 0 0 2 2 2 1 Shikimate kinase AAA_17 PF13207.6 gi|91773894|ref|YP_566586.1| - 0.0018 18.7 0.2 0.088 13.2 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 gi|91773894|ref|YP_566586.1| - 0.0023 18.2 0.0 0.0051 17.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.14 gi|91773894|ref|YP_566586.1| - 0.0026 17.9 0.1 0.0092 16.1 0.0 2.0 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 gi|91773894|ref|YP_566586.1| - 0.0042 16.5 0.0 0.0092 15.4 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|91773894|ref|YP_566586.1| - 0.0047 16.7 0.0 0.01 15.6 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|91773894|ref|YP_566586.1| - 0.0057 16.4 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_7 PF12775.7 gi|91773894|ref|YP_566586.1| - 0.0076 15.8 0.1 0.018 14.6 0.1 1.6 1 1 0 1 1 1 1 P-loop containing dynein motor region AAA_24 PF13479.6 gi|91773894|ref|YP_566586.1| - 0.0084 15.8 0.0 0.016 14.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|91773894|ref|YP_566586.1| - 0.0091 15.8 0.1 0.039 13.8 0.1 1.9 1 1 1 2 2 2 1 AAA domain Cytidylate_kin PF02224.18 gi|91773894|ref|YP_566586.1| - 0.021 14.5 0.0 0.055 13.2 0.0 1.7 1 0 0 1 1 1 0 Cytidylate kinase TniB PF05621.11 gi|91773894|ref|YP_566586.1| - 0.047 13.1 0.1 9.3 5.6 0.0 2.4 2 0 0 2 2 2 0 Bacterial TniB protein ResIII PF04851.15 gi|91773894|ref|YP_566586.1| - 0.048 13.7 0.0 0.094 12.7 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit RE_AspBHI_N PF18062.1 gi|91773894|ref|YP_566586.1| - 0.092 12.3 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Restriction endonuclease AspBHI N-terminal Sigma54_activ_2 PF14532.6 gi|91773894|ref|YP_566586.1| - 0.13 12.4 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|91773894|ref|YP_566586.1| - 0.16 12.4 0.0 0.31 11.4 0.0 1.6 1 0 0 1 1 1 0 RNA helicase DUF1922 PF09082.10 gi|91773895|ref|YP_566587.1| - 0.00014 22.1 1.4 0.00025 21.3 1.4 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1922) Zn-ribbon_8 PF09723.10 gi|91773895|ref|YP_566587.1| - 0.0074 16.4 0.3 0.018 15.1 0.1 1.8 2 0 0 2 2 2 1 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|91773895|ref|YP_566587.1| - 0.023 14.2 0.1 0.049 13.1 0.1 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding Ribosomal_S27e PF01667.17 gi|91773895|ref|YP_566587.1| - 0.042 13.5 1.2 0.099 12.4 1.2 1.6 1 0 0 1 1 1 0 Ribosomal protein S27 LuxQ-periplasm PF09308.10 gi|91773895|ref|YP_566587.1| - 0.045 13.2 0.1 0.059 12.9 0.1 1.2 1 0 0 1 1 1 0 LuxQ, periplasmic Lar_restr_allev PF14354.6 gi|91773895|ref|YP_566587.1| - 0.048 14.1 0.2 0.089 13.2 0.2 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-C4_Topoisom PF01396.19 gi|91773895|ref|YP_566587.1| - 0.51 10.2 3.5 8.8 6.2 0.1 2.6 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger MRNIP PF15749.5 gi|91773895|ref|YP_566587.1| - 1.5 9.6 5.7 5.1 7.9 5.6 2.1 1 1 0 1 1 1 0 MRN-interacting protein Acetyltransf_1 PF00583.25 gi|91773896|ref|YP_566588.1| - 1.2e-13 51.3 0.0 1.5e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|91773896|ref|YP_566588.1| - 1.4e-11 44.6 0.0 1.9e-11 44.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|91773896|ref|YP_566588.1| - 3e-11 43.3 0.0 3.8e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|91773896|ref|YP_566588.1| - 0.00087 19.5 0.0 0.0015 18.7 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|91773896|ref|YP_566588.1| - 0.0026 17.8 0.0 0.098 12.7 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_18 PF18014.1 gi|91773896|ref|YP_566588.1| - 0.0048 16.7 0.0 0.0087 15.9 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|91773896|ref|YP_566588.1| - 0.015 15.2 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_3 PF13302.7 gi|91773896|ref|YP_566588.1| - 0.043 14.5 0.0 0.054 14.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 gi|91773896|ref|YP_566588.1| - 0.057 13.4 0.0 0.15 12.1 0.0 1.7 2 0 0 2 2 2 0 ESCO1/2 acetyl-transferase Acetyltransf_6 PF13480.7 gi|91773896|ref|YP_566588.1| - 0.11 12.7 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain MMR_HSR1_C PF08438.10 gi|91773897|ref|YP_566589.1| - 3e-31 108.3 0.2 6.5e-31 107.2 0.1 1.6 2 0 0 2 2 2 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|91773897|ref|YP_566589.1| - 1.1e-19 70.6 0.0 3.8e-19 68.8 0.0 1.8 1 1 1 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.21 gi|91773897|ref|YP_566589.1| - 5e-14 52.1 0.0 1.5e-13 50.5 0.0 1.8 2 0 0 2 2 2 1 TGS domain FeoB_N PF02421.18 gi|91773897|ref|YP_566589.1| - 1.3e-08 34.6 2.5 5e-07 29.4 0.1 2.8 3 0 0 3 3 3 2 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 gi|91773897|ref|YP_566589.1| - 0.011 15.8 0.2 0.029 14.4 0.0 1.8 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain BcsB PF03170.13 gi|91773897|ref|YP_566589.1| - 0.22 9.9 0.3 0.45 8.8 0.1 1.5 2 0 0 2 2 2 0 Bacterial cellulose synthase subunit Cpn60_TCP1 PF00118.24 gi|91773898|ref|YP_566590.1| - 1.7e-166 554.7 20.3 1.9e-166 554.5 20.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family BioY PF02632.14 gi|91773899|ref|YP_566591.1| - 2.9e-39 134.2 23.1 4e-39 133.8 23.1 1.1 1 0 0 1 1 1 1 BioY family Pox_A9 PF04835.12 gi|91773899|ref|YP_566591.1| - 0.045 13.9 0.2 0.045 13.9 0.2 2.4 3 0 0 3 3 3 0 A9 protein conserved region DUF4271 PF14093.6 gi|91773899|ref|YP_566591.1| - 2.6 7.9 12.7 12 5.7 12.7 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4271) ABC_tran PF00005.27 gi|91773900|ref|YP_566592.1| - 2.5e-25 89.6 0.0 4.1e-25 88.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|91773900|ref|YP_566592.1| - 1.6e-09 37.5 0.4 0.00026 20.5 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|91773900|ref|YP_566592.1| - 4.8e-09 36.5 0.1 0.002 18.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|91773900|ref|YP_566592.1| - 2.1e-05 24.2 0.1 3.9e-05 23.3 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|91773900|ref|YP_566592.1| - 0.00013 22.2 0.1 0.00064 20.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|91773900|ref|YP_566592.1| - 0.00057 19.7 0.0 0.00065 19.5 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|91773900|ref|YP_566592.1| - 0.00066 19.6 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|91773900|ref|YP_566592.1| - 0.00069 20.2 0.2 0.0011 19.5 0.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|91773900|ref|YP_566592.1| - 0.0022 18.4 0.0 0.0045 17.4 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|91773900|ref|YP_566592.1| - 0.0039 16.8 0.0 1.2 8.7 0.0 2.5 3 0 0 3 3 3 1 AAA domain TniB PF05621.11 gi|91773900|ref|YP_566592.1| - 0.0084 15.5 0.2 0.29 10.5 0.0 2.1 2 0 0 2 2 2 1 Bacterial TniB protein AAA_30 PF13604.6 gi|91773900|ref|YP_566592.1| - 0.01 15.6 0.2 0.051 13.3 0.2 1.9 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|91773900|ref|YP_566592.1| - 0.013 15.5 0.4 2.2 8.1 0.1 2.2 2 0 0 2 2 2 0 NTPase AAA PF00004.29 gi|91773900|ref|YP_566592.1| - 0.021 15.2 0.1 0.38 11.2 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATP-synt_ab PF00006.25 gi|91773900|ref|YP_566592.1| - 0.042 13.5 0.1 2.5 7.7 0.0 2.0 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 gi|91773900|ref|YP_566592.1| - 0.054 13.2 0.2 1.2 8.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain Herpes_UL21 PF03252.13 gi|91773900|ref|YP_566592.1| - 0.079 11.7 0.0 0.1 11.3 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL21 AAA_5 PF07728.14 gi|91773900|ref|YP_566592.1| - 0.11 12.6 0.1 0.44 10.6 0.0 1.9 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.17 gi|91773900|ref|YP_566592.1| - 0.13 12.0 0.1 0.25 11.1 0.1 1.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_18 PF13238.6 gi|91773900|ref|YP_566592.1| - 0.14 12.7 0.1 3.7 8.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|91773900|ref|YP_566592.1| - 0.15 11.4 0.5 5 6.4 0.0 2.2 2 0 0 2 2 2 0 KaiC DEAD PF00270.29 gi|91773900|ref|YP_566592.1| - 0.17 11.7 0.1 0.38 10.5 0.0 1.6 2 0 0 2 2 2 0 DEAD/DEAH box helicase NACHT PF05729.12 gi|91773900|ref|YP_566592.1| - 0.18 11.7 0.0 0.33 10.8 0.0 1.4 1 0 0 1 1 1 0 NACHT domain ABC_tran PF00005.27 gi|91773901|ref|YP_566593.1| - 5.1e-27 95.1 0.0 8.2e-27 94.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773901|ref|YP_566593.1| - 1.6e-09 38.0 3.6 2.3e-06 27.6 0.2 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|91773901|ref|YP_566593.1| - 0.0004 20.7 0.0 0.0015 18.8 0.0 1.8 1 1 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 gi|91773901|ref|YP_566593.1| - 0.01 15.5 0.1 0.022 14.5 0.1 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation SMC_N PF02463.19 gi|91773901|ref|YP_566593.1| - 0.011 15.2 0.2 0.22 10.9 0.2 2.2 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain ATP-synt_ab PF00006.25 gi|91773901|ref|YP_566593.1| - 0.014 15.0 0.1 0.022 14.4 0.1 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_18 PF13238.6 gi|91773901|ref|YP_566593.1| - 0.014 15.9 0.2 0.069 13.7 0.1 2.0 2 0 0 2 2 2 0 AAA domain MeaB PF03308.16 gi|91773901|ref|YP_566593.1| - 0.017 14.1 0.4 0.029 13.3 0.4 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NTPase_1 PF03266.15 gi|91773901|ref|YP_566593.1| - 0.025 14.5 0.1 0.045 13.7 0.1 1.5 1 0 0 1 1 1 0 NTPase AAA_29 PF13555.6 gi|91773901|ref|YP_566593.1| - 0.025 14.3 0.3 0.05 13.4 0.3 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain tRNA_lig_kinase PF08303.11 gi|91773901|ref|YP_566593.1| - 0.041 14.0 0.1 0.074 13.1 0.1 1.4 1 0 0 1 1 1 0 tRNA ligase kinase domain Mg_chelatase PF01078.21 gi|91773901|ref|YP_566593.1| - 0.059 12.7 0.0 0.093 12.1 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 gi|91773901|ref|YP_566593.1| - 0.074 12.8 0.0 0.092 12.5 0.0 1.3 1 1 0 1 1 1 0 AAA domain MobB PF03205.14 gi|91773901|ref|YP_566593.1| - 0.1 12.5 0.8 0.38 10.6 0.2 2.0 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Spore_IV_A PF09547.10 gi|91773901|ref|YP_566593.1| - 0.14 11.0 0.1 0.2 10.5 0.1 1.2 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) AAA_23 PF13476.6 gi|91773901|ref|YP_566593.1| - 0.15 12.5 0.1 0.21 12.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|91773901|ref|YP_566593.1| - 0.15 11.2 0.8 0.25 10.5 0.4 1.5 2 0 0 2 2 2 0 NB-ARC domain TsaE PF02367.17 gi|91773901|ref|YP_566593.1| - 0.23 11.4 0.3 0.43 10.6 0.3 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 gi|91773901|ref|YP_566593.1| - 0.26 11.2 0.8 0.45 10.4 0.5 1.5 2 0 0 2 2 2 0 RsgA GTPase CbiQ PF02361.16 gi|91773902|ref|YP_566594.1| - 3.5e-33 115.1 6.0 4.4e-33 114.7 6.0 1.1 1 0 0 1 1 1 1 Cobalt transport protein HTH_5 PF01022.20 gi|91773903|ref|YP_566595.1| - 1.1e-15 57.2 0.7 1.1e-15 57.2 0.7 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|91773903|ref|YP_566595.1| - 1e-08 35.1 0.5 1e-08 35.1 0.5 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|91773903|ref|YP_566595.1| - 8.3e-05 22.4 0.8 0.00017 21.4 0.2 1.8 2 1 0 2 2 2 1 MarR family HTH_34 PF13601.6 gi|91773903|ref|YP_566595.1| - 0.00073 19.7 0.1 0.0013 18.8 0.1 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain Arg_repressor PF01316.21 gi|91773903|ref|YP_566595.1| - 0.0046 16.7 0.0 0.0077 16.0 0.0 1.4 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain HTH_1 PF00126.27 gi|91773903|ref|YP_566595.1| - 0.015 15.3 0.1 0.029 14.3 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family TrmB PF01978.19 gi|91773903|ref|YP_566595.1| - 0.019 14.8 0.0 0.035 14.0 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|91773903|ref|YP_566595.1| - 0.024 15.2 0.1 0.042 14.4 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain Cro PF09048.10 gi|91773903|ref|YP_566595.1| - 0.028 14.5 0.0 0.047 13.7 0.0 1.4 1 0 0 1 1 1 0 Cro HTH_IclR PF09339.10 gi|91773903|ref|YP_566595.1| - 0.047 13.5 1.1 0.061 13.1 0.3 1.7 2 1 0 2 2 2 0 IclR helix-turn-helix domain HxlR PF01638.17 gi|91773903|ref|YP_566595.1| - 0.091 12.6 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF4423 PF14394.6 gi|91773903|ref|YP_566595.1| - 0.099 12.3 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) ArsP_1 PF03773.13 gi|91773904|ref|YP_566596.1| - 1.8e-48 165.2 11.1 2.6e-48 164.7 11.1 1.2 1 0 0 1 1 1 1 Predicted permease AIRC PF00731.20 gi|91773904|ref|YP_566596.1| - 0.37 10.4 2.0 0.9 9.1 2.0 1.6 1 0 0 1 1 1 0 AIR carboxylase Acyl_transf_3 PF01757.22 gi|91773904|ref|YP_566596.1| - 1.3 8.0 13.0 0.22 10.5 8.8 1.8 2 0 0 2 2 2 0 Acyltransferase family Hydantoinase_A PF01968.18 gi|91773905|ref|YP_566597.1| - 1.3e-33 116.5 3.6 2e-32 112.6 1.8 2.9 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|91773905|ref|YP_566597.1| - 3.3e-33 114.9 5.4 3e-29 102.0 1.1 3.2 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|91773905|ref|YP_566597.1| - 1.2e-05 24.1 0.6 0.021 13.5 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|91773905|ref|YP_566597.1| - 0.0019 17.8 1.3 0.038 13.5 0.0 2.5 2 0 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.6 gi|91773905|ref|YP_566597.1| - 0.11 13.0 1.2 0.81 10.1 0.2 2.5 2 0 0 2 2 2 0 Cell division protein FtsA Ppx-GppA PF02541.16 gi|91773905|ref|YP_566597.1| - 0.16 11.4 0.5 0.37 10.2 0.5 1.5 1 0 0 1 1 1 0 Ppx/GppA phosphatase family F_bP_aldolase PF01116.20 gi|91773907|ref|YP_566599.1| - 1.1e-30 107.1 0.1 1.4e-30 106.8 0.1 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Tagatose_6_P_K PF08013.11 gi|91773907|ref|YP_566599.1| - 7.5e-09 34.8 0.0 1.2e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase Yip1 PF04893.17 gi|91773908|ref|YP_566600.1| - 1e-32 113.3 14.7 1.2e-32 112.9 14.7 1.0 1 0 0 1 1 1 1 Yip1 domain DUF1282 PF06930.12 gi|91773908|ref|YP_566600.1| - 0.00075 19.3 19.2 0.00098 18.9 19.2 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) DUF1189 PF06691.11 gi|91773908|ref|YP_566600.1| - 0.012 15.2 9.2 0.012 15.2 9.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1189) DUF4407 PF14362.6 gi|91773908|ref|YP_566600.1| - 6.3 6.1 6.2 8.7 5.6 6.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF167 PF02594.16 gi|91773909|ref|YP_566601.1| - 9.7e-20 70.5 0.1 1.2e-19 70.2 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 ELFV_dehydrog PF00208.21 gi|91773910|ref|YP_566602.1| - 2.7e-69 233.6 4.7 3.2e-69 233.4 3.0 1.8 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|91773910|ref|YP_566602.1| - 6e-55 184.7 0.0 1e-54 183.9 0.0 1.4 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|91773910|ref|YP_566602.1| - 0.0059 16.0 0.1 0.01 15.2 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|91773911|ref|YP_566603.1| - 2.9e-18 66.2 0.9 4.9e-18 65.5 0.9 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|91773911|ref|YP_566603.1| - 0.002 17.8 0.2 0.0043 16.7 0.2 1.5 1 1 1 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|91773911|ref|YP_566603.1| - 0.023 14.7 0.1 0.035 14.1 0.1 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IlvN PF07991.12 gi|91773911|ref|YP_566603.1| - 0.04 13.5 0.6 0.081 12.5 0.6 1.5 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Gln-synt_C PF00120.24 gi|91773912|ref|YP_566604.1| - 7.7e-132 439.5 0.0 9.3e-132 439.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|91773912|ref|YP_566604.1| - 3.5e-33 113.2 0.1 6.5e-33 112.3 0.1 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 gi|91773912|ref|YP_566604.1| - 0.00042 20.1 0.0 0.0037 17.1 0.0 2.2 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain Laminin_G_3 PF13385.6 gi|91773913|ref|YP_566605.1| - 5.1e-109 361.1 47.3 4.1e-28 98.4 2.8 5.8 6 0 0 6 6 6 4 Concanavalin A-like lectin/glucanases superfamily Pilin_N PF07790.11 gi|91773913|ref|YP_566605.1| - 1.1e-16 61.5 2.1 1.1e-16 61.5 2.1 2.4 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Laminin_G_2 PF02210.24 gi|91773913|ref|YP_566605.1| - 3.6e-14 53.4 15.5 9.9e-06 26.2 0.2 6.1 6 0 0 6 6 6 3 Laminin G domain Laminin_G_1 PF00054.23 gi|91773913|ref|YP_566605.1| - 1.2e-06 28.8 5.2 0.44 10.8 0.0 5.4 6 0 0 6 6 6 2 Laminin G domain Pentaxin PF00354.17 gi|91773913|ref|YP_566605.1| - 3.4e-05 23.6 6.2 0.27 10.9 0.3 3.7 3 0 0 3 3 3 2 Pentaxin family Sialidase PF02973.16 gi|91773913|ref|YP_566605.1| - 4.1e-05 23.2 15.5 0.12 11.9 0.5 5.6 5 1 0 5 5 5 3 Sialidase, N-terminal domain DUF4183 PF13799.6 gi|91773913|ref|YP_566605.1| - 0.055 13.3 0.1 1.4 8.8 0.0 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4183) BPL_N PF09825.9 gi|91773914|ref|YP_566606.1| - 0.041 12.9 0.4 4.7 6.2 0.1 2.1 2 0 0 2 2 2 0 Biotin-protein ligase, N terminal Phage_coat PF09063.10 gi|91773914|ref|YP_566606.1| - 0.099 12.7 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Phage PP7 coat protein DUF1894 PF08979.11 gi|91773915|ref|YP_566607.1| - 2.6e-34 117.4 0.2 2.9e-34 117.3 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) AIRS_C PF02769.22 gi|91773916|ref|YP_566608.1| - 2e-17 63.8 0.0 3.9e-17 62.8 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|91773916|ref|YP_566608.1| - 3.8e-14 53.1 0.4 6.4e-14 52.4 0.4 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AA_kinase PF00696.28 gi|91773917|ref|YP_566609.1| - 1.6e-46 158.9 0.5 1.6e-46 158.9 0.5 1.6 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.6 gi|91773917|ref|YP_566609.1| - 1.3e-27 95.3 3.7 1.8e-14 53.2 0.0 3.4 3 0 0 3 3 3 2 ACT domain ACT PF01842.25 gi|91773917|ref|YP_566609.1| - 1.5e-21 75.8 4.3 2.6e-11 43.1 0.0 2.9 3 0 0 3 3 3 2 ACT domain ACT_6 PF13740.6 gi|91773917|ref|YP_566609.1| - 0.026 14.5 0.2 0.22 11.5 0.1 2.4 3 0 0 3 3 3 0 ACT domain MCM_lid PF17855.1 gi|91773917|ref|YP_566609.1| - 0.11 12.9 0.8 11 6.5 0.1 2.5 2 0 0 2 2 2 0 MCM AAA-lid domain S-layer PF07752.11 gi|91773918|ref|YP_566610.1| - 6.5e-11 41.8 27.7 3.3e-06 26.4 9.3 2.9 1 1 2 3 3 3 2 S-layer protein TcfC PF16967.5 gi|91773918|ref|YP_566610.1| - 8.1e-05 22.0 1.0 0.00074 19.0 0.0 2.8 2 1 1 3 3 3 1 E-set like domain PA-IIL PF07472.11 gi|91773918|ref|YP_566610.1| - 0.00086 19.6 0.7 0.06 13.7 0.1 2.9 2 1 0 2 2 2 1 Fucose-binding lectin II (PA-IIL) CopC PF04234.12 gi|91773918|ref|YP_566610.1| - 0.0022 19.0 0.1 0.0075 17.3 0.1 1.9 1 0 0 1 1 1 1 CopC domain CE2_N PF17996.1 gi|91773918|ref|YP_566610.1| - 0.038 14.0 0.7 0.038 14.0 0.7 2.3 3 0 0 3 3 3 0 Carbohydrate esterase 2 N-terminal DUF5599 PF18141.1 gi|91773918|ref|YP_566610.1| - 0.056 13.7 0.6 0.57 10.5 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5599) PHD_like PF12910.7 gi|91773918|ref|YP_566610.1| - 0.58 10.2 4.0 3.3 7.7 0.0 3.3 3 1 1 4 4 4 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system PhosphMutase PF10143.9 gi|91773919|ref|YP_566611.1| - 5.4e-57 192.4 0.0 7.6e-57 191.9 0.0 1.2 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|91773919|ref|YP_566611.1| - 1.3e-41 142.6 0.0 1.5e-41 142.4 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|91773919|ref|YP_566611.1| - 0.0017 18.0 0.2 0.0038 16.9 0.0 1.5 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Alk_phosphatase PF00245.20 gi|91773919|ref|YP_566611.1| - 0.11 11.4 1.5 0.51 9.2 0.3 2.0 2 0 0 2 2 2 0 Alkaline phosphatase HSP20 PF00011.21 gi|91773920|ref|YP_566612.1| - 2.2e-22 79.1 2.8 2.6e-22 78.9 2.8 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|91773920|ref|YP_566612.1| - 2.4e-11 43.0 0.0 3.4e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|91773920|ref|YP_566612.1| - 0.00017 22.6 0.6 0.00026 21.9 0.6 1.3 1 0 0 1 1 1 1 CS domain FKBP26_C PF18046.1 gi|91773920|ref|YP_566612.1| - 0.026 14.6 3.0 2.1 8.5 0.4 2.4 2 0 0 2 2 2 0 FKBP26_C-terminal GvpH PF05455.11 gi|91773920|ref|YP_566612.1| - 0.079 13.0 0.1 0.44 10.6 0.1 2.0 2 0 0 2 2 2 0 GvpH DUF2718 PF10918.8 gi|91773920|ref|YP_566612.1| - 0.11 12.9 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2718) F420_ligase PF01996.16 gi|91773921|ref|YP_566613.1| - 1.5e-58 198.1 2.2 1.8e-58 197.8 2.2 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase dCMP_cyt_deam_1 PF00383.23 gi|91773922|ref|YP_566614.1| - 5.3e-29 100.1 3.8 1e-28 99.2 3.8 1.4 1 1 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|91773922|ref|YP_566614.1| - 1.2e-19 70.4 1.0 1.8e-19 69.9 1.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC_N PF08210.11 gi|91773922|ref|YP_566614.1| - 0.0011 18.9 0.6 0.0014 18.6 0.6 1.3 1 0 0 1 1 1 1 APOBEC-like N-terminal domain Bd3614-deam PF14439.6 gi|91773922|ref|YP_566614.1| - 0.0029 17.7 1.6 0.0053 16.8 0.7 1.7 1 1 1 2 2 2 1 Bd3614-like deaminase Methyltr_RsmB-F PF01189.17 gi|91773922|ref|YP_566614.1| - 0.008 15.8 0.1 0.011 15.4 0.1 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F XOO_2897-deam PF14440.6 gi|91773922|ref|YP_566614.1| - 0.013 15.6 0.1 0.021 14.9 0.1 1.3 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase NAD1 PF18778.1 gi|91773922|ref|YP_566614.1| - 0.097 12.7 0.6 0.13 12.3 0.6 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 SNAD4 PF18750.1 gi|91773922|ref|YP_566614.1| - 0.1 12.7 0.3 0.16 12.1 0.3 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 zf-C3HC4 PF00097.25 gi|91773922|ref|YP_566614.1| - 1.5 8.8 7.1 0.88 9.5 4.4 2.1 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) SecD_SecF PF02355.16 gi|91773923|ref|YP_566615.1| - 3.4e-36 124.4 13.5 5.5e-36 123.7 13.5 1.3 1 0 0 1 1 1 1 Protein export membrane protein Patched PF02460.18 gi|91773923|ref|YP_566615.1| - 0.00017 19.8 11.1 0.00025 19.3 11.1 1.2 1 0 0 1 1 1 1 Patched family Sec_GG PF07549.14 gi|91773923|ref|YP_566615.1| - 0.0068 15.9 0.0 0.014 14.8 0.0 1.6 1 0 0 1 1 1 1 SecD/SecF GG Motif SecD_SecF PF02355.16 gi|91773924|ref|YP_566616.1| - 2.7e-14 53.0 10.3 5.3e-14 52.0 10.3 1.4 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|91773924|ref|YP_566616.1| - 0.029 13.8 0.0 0.079 12.5 0.0 1.8 1 0 0 1 1 1 0 SecD/SecF GG Motif Podoplanin PF05808.11 gi|91773924|ref|YP_566616.1| - 0.04 14.0 2.5 0.11 12.7 2.5 1.7 1 0 0 1 1 1 0 Podoplanin MMPL PF03176.15 gi|91773924|ref|YP_566616.1| - 0.05 12.5 17.0 0.097 11.6 17.0 1.4 1 0 0 1 1 1 0 MMPL family DNA_pol3_delta2 PF13177.6 gi|91773925|ref|YP_566617.1| - 9.6e-12 45.0 0.0 1.7e-11 44.1 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 gi|91773925|ref|YP_566617.1| - 3.5e-10 40.2 0.2 7.1e-10 39.2 0.2 1.5 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|91773925|ref|YP_566617.1| - 2.6e-09 37.6 0.0 1e-08 35.7 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|91773925|ref|YP_566617.1| - 5.7e-05 23.2 0.0 0.00031 20.8 0.0 2.0 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|91773925|ref|YP_566617.1| - 0.00099 19.1 0.0 0.0018 18.2 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_assoc_2 PF16193.5 gi|91773925|ref|YP_566617.1| - 0.0098 16.2 0.3 0.055 13.8 0.0 2.2 2 0 0 2 2 2 1 AAA C-terminal domain AAA_16 PF13191.6 gi|91773925|ref|YP_566617.1| - 0.012 16.0 0.0 0.066 13.6 0.0 2.0 1 1 0 1 1 1 0 AAA ATPase domain RuvB_N PF05496.12 gi|91773925|ref|YP_566617.1| - 0.017 14.9 0.0 4.3 7.1 0.0 3.1 2 1 1 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain AAA_24 PF13479.6 gi|91773925|ref|YP_566617.1| - 0.043 13.5 0.0 0.096 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|91773925|ref|YP_566617.1| - 0.09 13.1 0.0 0.48 10.7 0.0 2.1 2 1 0 2 2 2 0 AAA domain Radical_SAM_C PF16199.5 gi|91773926|ref|YP_566618.1| - 2.3e-26 91.7 0.0 4.8e-26 90.6 0.0 1.6 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|91773926|ref|YP_566618.1| - 3e-17 63.5 0.0 8.1e-17 62.1 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_10 PF13673.7 gi|91773926|ref|YP_566618.1| - 0.00011 22.2 0.0 0.0003 20.7 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|91773926|ref|YP_566618.1| - 0.00037 20.7 0.0 0.00079 19.7 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|91773926|ref|YP_566618.1| - 0.017 15.5 0.1 0.034 14.6 0.1 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain TrmB PF01978.19 gi|91773927|ref|YP_566619.1| - 1.8e-05 24.5 0.0 3e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FeoC PF09012.10 gi|91773927|ref|YP_566619.1| - 0.1 12.7 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator DUF772 PF05598.11 gi|91773928|ref|YP_566620.1| - 9.1e-22 76.9 0.0 1.8e-21 75.9 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91773928|ref|YP_566620.1| - 1.8e-16 60.4 2.1 5.5e-16 58.9 2.1 1.8 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91773928|ref|YP_566620.1| - 0.0038 17.4 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91773928|ref|YP_566620.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91773928|ref|YP_566620.1| - 0.037 13.7 0.0 0.067 12.9 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease AAA_31 PF13614.6 gi|91773929|ref|YP_566621.1| - 1.3e-13 51.3 0.0 2.7e-13 50.2 0.0 1.6 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|91773929|ref|YP_566621.1| - 6.2e-12 45.5 1.6 2.2e-09 37.2 1.6 3.0 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|91773929|ref|YP_566621.1| - 5.9e-10 39.3 0.0 8.2e-10 38.8 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MipZ PF09140.11 gi|91773929|ref|YP_566621.1| - 1.8e-06 27.5 0.0 0.00016 21.0 0.0 2.1 2 0 0 2 2 2 1 ATPase MipZ CBP_BcsQ PF06564.12 gi|91773929|ref|YP_566621.1| - 5.8e-05 22.7 0.0 0.00051 19.6 0.0 2.0 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ VirC1 PF07015.11 gi|91773929|ref|YP_566621.1| - 0.00023 20.6 0.0 0.0013 18.1 0.0 1.9 2 0 0 2 2 2 1 VirC1 protein SRP54 PF00448.22 gi|91773929|ref|YP_566621.1| - 0.009 15.7 0.0 0.83 9.2 0.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Fer4_NifH PF00142.18 gi|91773929|ref|YP_566621.1| - 0.015 14.7 0.0 0.027 13.9 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLP1_P PF16575.5 gi|91773929|ref|YP_566621.1| - 0.038 13.8 0.1 0.086 12.6 0.0 1.5 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop MeaB PF03308.16 gi|91773929|ref|YP_566621.1| - 0.048 12.6 0.1 0.74 8.7 0.1 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 gi|91773929|ref|YP_566621.1| - 0.14 11.7 0.6 0.94 9.0 0.1 2.0 2 0 0 2 2 2 0 AAA domain ArsA_ATPase PF02374.15 gi|91773929|ref|YP_566621.1| - 0.18 10.9 0.2 0.55 9.4 0.0 1.9 3 0 0 3 3 3 0 Anion-transporting ATPase ATP-synt_J PF04911.12 gi|91773930|ref|YP_566622.1| - 1.7e-05 24.3 0.3 0.0031 17.1 0.0 2.6 2 0 0 2 2 2 2 ATP synthase j chain Trep_Strep PF09605.10 gi|91773930|ref|YP_566622.1| - 0.013 15.4 14.6 0.03 14.3 14.5 1.7 1 1 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) Fae PF08714.11 gi|91773931|ref|YP_566623.1| - 1e-70 236.8 0.2 1e-70 236.8 0.2 1.5 2 0 0 2 2 2 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.24 gi|91773931|ref|YP_566623.1| - 1.6e-23 83.5 2.0 5.4e-23 81.8 1.7 2.0 2 1 0 2 2 2 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Ribul_P_3_epim PF00834.19 gi|91773931|ref|YP_566623.1| - 2.8e-06 26.9 1.2 6.3e-06 25.7 1.2 1.7 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family PcrB PF01884.17 gi|91773931|ref|YP_566623.1| - 0.03 13.8 4.2 0.098 12.1 0.5 2.2 1 1 0 2 2 2 0 PcrB family QRPTase_C PF01729.19 gi|91773931|ref|YP_566623.1| - 0.056 13.2 0.8 0.13 12.1 0.4 1.8 1 1 1 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain TIM PF00121.18 gi|91773932|ref|YP_566624.1| - 2.7e-10 40.0 0.0 3.7e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Triosephosphate isomerase ThiG PF05690.14 gi|91773932|ref|YP_566624.1| - 6.2e-05 22.4 1.0 0.00033 20.0 0.6 2.0 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|91773932|ref|YP_566624.1| - 0.003 17.0 3.4 0.003 17.0 3.4 1.6 1 1 1 2 2 2 1 Nitronate monooxygenase PDH PF02153.17 gi|91773934|ref|YP_566626.1| - 1.9e-59 200.8 0.0 2.4e-59 200.4 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.15 gi|91773934|ref|YP_566626.1| - 9.4e-13 48.6 0.0 2e-12 47.5 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|91773934|ref|YP_566626.1| - 2.5e-09 37.6 0.1 8.5e-09 35.9 0.0 2.0 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|91773934|ref|YP_566626.1| - 2.2e-07 30.4 0.1 4.4e-07 29.4 0.1 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|91773934|ref|YP_566626.1| - 2.4e-05 24.0 0.1 8.3e-05 22.2 0.0 1.8 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_N PF01210.23 gi|91773934|ref|YP_566626.1| - 0.00012 22.1 1.5 0.017 15.1 0.1 2.8 1 1 1 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Shikimate_DH PF01488.20 gi|91773934|ref|YP_566626.1| - 0.0011 19.1 0.1 0.0089 16.1 0.0 2.2 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase FDX-ACB PF03147.14 gi|91773934|ref|YP_566626.1| - 0.0021 18.4 0.2 0.0088 16.4 0.0 2.1 2 0 0 2 2 2 1 Ferredoxin-fold anticodon binding domain GFO_IDH_MocA PF01408.22 gi|91773934|ref|YP_566626.1| - 0.0052 17.6 0.1 0.031 15.1 0.0 2.2 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold NmrA PF05368.13 gi|91773934|ref|YP_566626.1| - 0.0099 15.5 0.0 0.026 14.1 0.0 1.7 1 1 0 1 1 1 1 NmrA-like family KR PF08659.10 gi|91773934|ref|YP_566626.1| - 0.013 15.4 0.0 0.059 13.3 0.0 2.2 2 1 0 2 2 2 0 KR domain DpaA_N PF16924.5 gi|91773934|ref|YP_566626.1| - 0.02 15.0 0.0 0.066 13.3 0.0 1.9 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain Epimerase PF01370.21 gi|91773934|ref|YP_566626.1| - 0.023 14.2 0.0 0.037 13.5 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family CoA_binding_2 PF13380.6 gi|91773934|ref|YP_566626.1| - 0.027 15.0 0.0 0.059 13.9 0.0 1.6 1 0 0 1 1 1 0 CoA binding domain 3HCDH_N PF02737.18 gi|91773934|ref|YP_566626.1| - 0.029 14.3 0.1 2.3 8.1 0.0 2.4 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CoA_binding PF02629.19 gi|91773934|ref|YP_566626.1| - 0.052 14.2 0.1 0.14 12.8 0.1 1.8 1 0 0 1 1 1 0 CoA binding domain DapB_N PF01113.20 gi|91773934|ref|YP_566626.1| - 0.054 13.6 0.4 0.14 12.3 0.1 1.8 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus AlaDh_PNT_C PF01262.21 gi|91773934|ref|YP_566626.1| - 0.3 10.4 2.8 2.3 7.5 0.4 2.7 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain Shikimate_dh_N PF08501.11 gi|91773935|ref|YP_566627.1| - 6.3e-27 93.7 0.0 1.7e-26 92.3 0.0 1.8 2 0 0 2 2 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|91773935|ref|YP_566627.1| - 1.7e-14 53.3 0.2 3.1e-14 52.4 0.2 1.5 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|91773935|ref|YP_566627.1| - 7.8e-12 45.4 0.1 1.3e-11 44.7 0.1 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|91773935|ref|YP_566627.1| - 6.5e-05 23.4 0.3 0.00013 22.5 0.3 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent adh_short PF00106.25 gi|91773935|ref|YP_566627.1| - 0.00017 21.1 1.7 0.00064 19.2 1.7 1.9 1 1 0 1 1 1 1 short chain dehydrogenase 2-Hacid_dh_C PF02826.19 gi|91773935|ref|YP_566627.1| - 0.00042 19.7 0.4 0.00095 18.6 0.1 1.7 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|91773935|ref|YP_566627.1| - 0.0029 18.0 0.0 0.0044 17.4 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding IlvN PF07991.12 gi|91773935|ref|YP_566627.1| - 0.0034 17.0 0.1 0.0077 15.8 0.1 1.6 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_C PF01262.21 gi|91773935|ref|YP_566627.1| - 0.004 16.5 0.5 0.0063 15.8 0.5 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain AdoHcyase_NAD PF00670.21 gi|91773935|ref|YP_566627.1| - 0.012 15.7 0.7 0.018 15.1 0.7 1.3 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 3HCDH_N PF02737.18 gi|91773935|ref|YP_566627.1| - 0.018 14.9 0.3 0.03 14.2 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 gi|91773935|ref|YP_566627.1| - 0.029 14.0 0.1 0.045 13.4 0.1 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA adh_short_C2 PF13561.6 gi|91773935|ref|YP_566627.1| - 0.033 13.7 0.2 0.052 13.1 0.2 1.3 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase FAD_binding_2 PF00890.24 gi|91773935|ref|YP_566627.1| - 0.039 13.0 0.6 0.061 12.4 0.6 1.3 1 0 0 1 1 1 0 FAD binding domain THF_DHG_CYH_C PF02882.19 gi|91773935|ref|YP_566627.1| - 0.049 12.9 0.0 0.52 9.6 0.0 2.1 1 1 1 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Pyr_redox_3 PF13738.6 gi|91773935|ref|YP_566627.1| - 0.054 12.7 0.1 0.07 12.4 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DHquinase_I PF01487.15 gi|91773936|ref|YP_566628.1| - 7e-55 186.8 1.0 8.1e-55 186.5 1.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase HMGL-like PF00682.19 gi|91773936|ref|YP_566628.1| - 0.00098 18.7 0.2 1.2 8.6 0.1 2.3 2 0 0 2 2 2 2 HMGL-like Dehalogenase PF13486.6 gi|91773936|ref|YP_566628.1| - 0.1 12.0 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Reductive dehalogenase subunit DHQS PF01959.16 gi|91773937|ref|YP_566629.1| - 8.7e-150 498.5 3.3 9.7e-150 498.3 3.3 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II OapA PF04225.12 gi|91773937|ref|YP_566629.1| - 0.023 14.8 0.0 6 7.0 0.0 2.5 2 0 0 2 2 2 0 Opacity-associated protein A LysM-like domain Aldolase PF01081.19 gi|91773937|ref|YP_566629.1| - 0.061 12.7 0.1 0.21 11.0 0.0 1.8 2 0 0 2 2 2 0 KDPG and KHG aldolase DeoC PF01791.9 gi|91773938|ref|YP_566630.1| - 8.7e-65 218.6 0.2 1.1e-64 218.3 0.2 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase ThiG PF05690.14 gi|91773938|ref|YP_566630.1| - 0.0044 16.4 1.6 0.038 13.3 0.2 2.4 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG PA PF02225.22 gi|91773938|ref|YP_566630.1| - 0.012 15.7 0.3 2.3 8.3 0.0 2.8 2 1 1 3 3 3 0 PA domain OMPdecase PF00215.24 gi|91773938|ref|YP_566630.1| - 0.021 14.4 0.1 0.036 13.7 0.1 1.4 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family GATase PF00117.28 gi|91773939|ref|YP_566631.1| - 2.1e-39 135.3 0.0 2.3e-39 135.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|91773939|ref|YP_566631.1| - 5.2e-12 46.0 3.9 2.2e-10 40.7 2.1 2.9 1 1 1 2 2 2 1 Peptidase C26 DJ-1_PfpI PF01965.24 gi|91773939|ref|YP_566631.1| - 0.031 14.1 0.0 0.06 13.1 0.0 1.5 1 1 0 1 1 1 0 DJ-1/PfpI family Big_1 PF02369.16 gi|91773940|ref|YP_566632.1| - 1.4e-10 41.0 7.4 5.2e-10 39.2 7.4 2.1 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 1) Big_3_5 PF16640.5 gi|91773940|ref|YP_566632.1| - 5.8e-06 26.4 5.5 5.8e-06 26.4 5.5 2.9 3 1 0 3 3 3 1 Bacterial Ig-like domain (group 3) Invasin_D3 PF09134.10 gi|91773940|ref|YP_566632.1| - 4.1e-05 23.8 3.2 9.9e-05 22.6 3.2 1.6 1 0 0 1 1 1 1 Invasin, domain 3 CarboxypepD_reg PF13620.6 gi|91773940|ref|YP_566632.1| - 0.0049 17.1 2.1 0.016 15.5 2.1 1.9 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain RVT_1 PF00078.27 gi|91773941|ref|YP_566633.1| - 1.4e-42 145.7 0.1 3.1e-42 144.6 0.0 1.6 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_N PF13655.6 gi|91773941|ref|YP_566633.1| - 7.4e-28 96.6 2.2 7.4e-28 96.6 2.2 1.9 2 0 0 2 2 2 1 N-terminal domain of reverse transcriptase GIIM PF08388.11 gi|91773941|ref|YP_566633.1| - 3.4e-24 84.7 6.4 8.9e-24 83.4 6.4 1.8 1 0 0 1 1 1 1 Group II intron, maturase-specific domain Intron_maturas2 PF01348.21 gi|91773941|ref|YP_566633.1| - 0.012 15.6 3.5 0.12 12.3 0.5 3.7 3 1 0 3 3 3 0 Type II intron maturase HNH PF01844.23 gi|91773941|ref|YP_566633.1| - 0.12 12.6 3.4 0.25 11.6 3.4 1.6 1 0 0 1 1 1 0 HNH endonuclease GPI-anchored PF10342.9 gi|91773942|ref|YP_566634.1| - 0.033 14.9 2.9 0.04 14.7 0.2 2.5 3 0 0 3 3 3 0 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family Gram_pos_anchor PF00746.21 gi|91773942|ref|YP_566634.1| - 0.052 13.5 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Deltameth_res PF16020.5 gi|91773942|ref|YP_566634.1| - 0.093 12.6 0.1 0.43 10.5 0.0 2.2 3 0 0 3 3 3 0 Deltamethrin resistance DUF772 PF05598.11 gi|91773943|ref|YP_566635.1| - 0.008 16.2 0.0 0.035 14.1 0.0 2.1 2 1 0 2 2 2 1 Transposase domain (DUF772) DUF4283 PF14111.6 gi|91773943|ref|YP_566635.1| - 0.026 14.1 0.1 0.057 12.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) DUF1616 PF07760.11 gi|91773944|ref|YP_566636.1| - 5.1e-112 374.0 0.1 5.9e-112 373.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Chordopox_A33R PF05966.12 gi|91773944|ref|YP_566636.1| - 0.017 14.4 0.1 0.03 13.6 0.1 1.3 1 0 0 1 1 1 0 Chordopoxvirus A33R protein DUF872 PF05915.12 gi|91773944|ref|YP_566636.1| - 0.076 13.2 0.9 1.4 9.1 0.0 2.5 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF3671 PF12420.8 gi|91773944|ref|YP_566636.1| - 1.9 8.6 4.6 0.36 10.9 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function DUF4870 PF09685.10 gi|91773944|ref|YP_566636.1| - 2.9 8.0 8.1 4.2 7.5 2.7 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4870) CPBP PF02517.16 gi|91773945|ref|YP_566637.1| - 9.7e-17 61.1 7.3 9.7e-17 61.1 7.3 2.5 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease DUF4969 PF16339.5 gi|91773947|ref|YP_566639.1| - 0.025 14.9 0.1 0.25 11.7 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4969) AbiEii PF08843.11 gi|91773948|ref|YP_566640.1| - 8.8e-06 25.8 0.0 8.8e-05 22.6 0.0 2.0 1 1 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system BRO1 PF03097.18 gi|91773949|ref|YP_566641.1| - 0.062 12.1 0.0 0.095 11.5 0.0 1.3 1 0 0 1 1 1 0 BRO1-like domain AP_endonuc_2 PF01261.24 gi|91773950|ref|YP_566642.1| - 1.1e-14 54.4 0.0 1.3e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel OrfB_Zn_ribbon PF07282.11 gi|91773951|ref|YP_566643.1| - 2.3e-24 85.1 1.7 2.8e-23 81.6 1.3 2.4 2 0 0 2 2 2 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|91773951|ref|YP_566643.1| - 2.1e-11 44.1 0.1 4.4e-11 43.1 0.1 1.5 1 0 0 1 1 1 1 Probable transposase C1_2 PF03107.16 gi|91773951|ref|YP_566643.1| - 0.00012 22.3 1.4 0.00026 21.2 1.4 1.5 1 0 0 1 1 1 1 C1 domain C1_1 PF00130.22 gi|91773951|ref|YP_566643.1| - 0.0021 17.9 0.8 0.0046 16.8 0.8 1.5 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) HypA PF01155.19 gi|91773951|ref|YP_566643.1| - 0.018 15.0 0.1 0.036 14.1 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF4202 PF13875.6 gi|91773951|ref|YP_566643.1| - 0.059 13.3 0.4 0.1 12.5 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4202) Topo-VIb_trans PF09239.11 gi|91773951|ref|YP_566643.1| - 0.07 13.0 0.6 0.36 10.6 0.0 2.4 3 0 0 3 3 3 0 Topoisomerase VI B subunit, transducer zinc_ribbon_4 PF13717.6 gi|91773951|ref|YP_566643.1| - 0.076 12.9 1.5 3.1 7.8 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain IBR PF01485.21 gi|91773951|ref|YP_566643.1| - 0.077 13.2 1.4 0.19 12.0 0.7 1.9 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain DZR PF12773.7 gi|91773951|ref|YP_566643.1| - 0.08 13.0 0.7 0.19 11.8 0.7 1.6 1 0 0 1 1 1 0 Double zinc ribbon zf-C2H2_11 PF16622.5 gi|91773951|ref|YP_566643.1| - 0.2 11.4 4.9 1.7 8.4 0.3 2.4 2 0 0 2 2 2 0 zinc-finger C2H2-type Rubredoxin_2 PF18073.1 gi|91773951|ref|YP_566643.1| - 0.28 10.9 6.1 0.42 10.4 1.0 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain DNA_RNApol_7kD PF03604.13 gi|91773951|ref|YP_566643.1| - 0.33 10.7 5.5 1.3 8.7 5.5 2.0 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.10 gi|91773951|ref|YP_566643.1| - 0.36 11.0 2.2 8.1 6.7 0.1 2.7 3 0 0 3 3 3 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|91773951|ref|YP_566643.1| - 1.8 8.1 4.0 9.9 5.7 0.5 2.6 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|91773951|ref|YP_566643.1| - 2.3 8.1 6.7 27 4.7 0.9 2.5 1 1 1 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.8 gi|91773951|ref|YP_566643.1| - 2.6 8.0 4.1 16 5.5 0.3 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Glycos_transf_2 PF00535.26 gi|91773953|ref|YP_566645.1| - 4.7e-41 140.4 2.7 1.2e-23 83.8 0.1 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|91773953|ref|YP_566645.1| - 8.9e-11 42.1 3.1 1.1e-06 28.7 0.1 2.4 2 1 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|91773953|ref|YP_566645.1| - 1.1e-09 38.7 0.1 9.5e-05 22.8 0.0 2.4 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|91773953|ref|YP_566645.1| - 3.5e-09 36.5 0.2 5.6e-05 22.7 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 NTP_transferase PF00483.23 gi|91773953|ref|YP_566645.1| - 0.061 12.9 0.2 0.15 11.6 0.0 1.6 2 0 0 2 2 2 0 Nucleotidyl transferase DUF772 PF05598.11 gi|91773954|ref|YP_566646.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91773954|ref|YP_566646.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91773954|ref|YP_566646.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91773954|ref|YP_566646.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91773954|ref|YP_566646.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease DUF2304 PF10066.9 gi|91773955|ref|YP_566647.1| - 0.0092 16.2 7.9 0.015 15.5 7.9 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) Claudin_2 PF13903.6 gi|91773955|ref|YP_566647.1| - 0.16 11.7 3.4 0.19 11.4 3.4 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF354 PF04007.12 gi|91773956|ref|YP_566648.1| - 2.7e-25 89.2 2.3 3.2e-25 88.9 2.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|91773956|ref|YP_566648.1| - 0.00015 21.8 0.2 0.00034 20.7 0.1 1.7 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|91773956|ref|YP_566648.1| - 0.072 13.1 0.0 0.2 11.6 0.0 1.8 1 1 0 1 1 1 0 Glycosyltransferase Family 4 Epimerase_2 PF02350.19 gi|91773957|ref|YP_566649.1| - 3.6e-117 391.1 0.0 4.2e-117 390.9 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.12 gi|91773957|ref|YP_566649.1| - 2.3e-05 23.7 0.5 2.9e-05 23.3 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|91773957|ref|YP_566649.1| - 0.0093 16.0 0.0 0.017 15.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|91773957|ref|YP_566649.1| - 0.014 15.4 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|91773958|ref|YP_566650.1| - 5.1e-35 120.5 0.0 1.2e-34 119.3 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|91773958|ref|YP_566650.1| - 1.4e-26 93.6 0.0 2.6e-26 92.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|91773958|ref|YP_566650.1| - 6.8e-09 35.9 0.1 1.1e-08 35.3 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|91773958|ref|YP_566650.1| - 2.2e-08 34.4 0.0 4.2e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 gi|91773958|ref|YP_566650.1| - 0.0052 16.5 0.1 0.0091 15.7 0.1 1.4 1 0 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_4_4 PF13579.6 gi|91773958|ref|YP_566650.1| - 0.018 15.5 0.0 0.027 14.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|91773958|ref|YP_566650.1| - 0.022 14.8 0.7 0.15 12.1 0.3 2.3 1 1 0 2 2 2 0 Glycosyl transferase 4-like Epimerase PF01370.21 gi|91773959|ref|YP_566651.1| - 1.2e-51 175.5 0.0 1.5e-51 175.2 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|91773959|ref|YP_566651.1| - 3.4e-45 154.9 0.0 4e-45 154.7 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|91773959|ref|YP_566651.1| - 1.1e-23 83.7 0.1 1.4e-23 83.3 0.1 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|91773959|ref|YP_566651.1| - 7.8e-19 67.9 0.1 9.2e-18 64.4 0.1 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|91773959|ref|YP_566651.1| - 1.5e-13 50.5 0.0 1.9e-13 50.1 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|91773959|ref|YP_566651.1| - 3.9e-11 43.2 0.0 5.8e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|91773959|ref|YP_566651.1| - 5.8e-11 42.1 0.9 2.3e-08 33.5 0.9 2.7 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.25 gi|91773959|ref|YP_566651.1| - 1.1e-06 28.3 0.0 7.6e-06 25.5 0.0 2.3 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 gi|91773959|ref|YP_566651.1| - 0.00016 21.3 0.0 0.0003 20.4 0.0 1.4 1 1 0 1 1 1 1 NmrA-like family KR PF08659.10 gi|91773959|ref|YP_566651.1| - 0.00025 21.0 0.1 0.0011 18.9 0.1 1.9 1 1 0 1 1 1 1 KR domain Pyr_redox PF00070.27 gi|91773959|ref|YP_566651.1| - 0.1 13.2 0.1 1.5 9.4 0.0 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Glycos_transf_1 PF00534.20 gi|91773961|ref|YP_566653.1| - 1.3e-29 102.9 0.1 3.4e-29 101.6 0.1 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|91773961|ref|YP_566653.1| - 2.4e-20 73.3 0.0 3.7e-20 72.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|91773961|ref|YP_566653.1| - 9.6e-14 51.7 0.0 7.7e-13 48.8 0.0 2.3 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|91773961|ref|YP_566653.1| - 1.1e-09 38.5 0.0 2.4e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|91773961|ref|YP_566653.1| - 0.00027 21.4 0.0 0.0014 19.1 0.0 1.8 1 1 1 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|91773961|ref|YP_566653.1| - 0.017 15.1 1.0 0.24 11.4 0.1 2.9 3 1 0 3 3 3 0 Glycosyl transferase 4-like Polysacc_synt PF01943.17 gi|91773962|ref|YP_566654.1| - 4.4e-30 105.0 24.0 4.4e-30 105.0 24.0 2.6 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|91773962|ref|YP_566654.1| - 3.7e-27 95.3 18.5 6.1e-27 94.6 18.5 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein MatE PF01554.18 gi|91773962|ref|YP_566654.1| - 3.2e-18 65.9 32.3 1.5e-09 37.7 12.2 2.6 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|91773962|ref|YP_566654.1| - 2.9e-13 50.1 51.9 2.7e-11 43.7 9.6 4.8 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|91773962|ref|YP_566654.1| - 1.2e-08 34.0 32.2 2.8e-08 32.8 32.0 1.6 1 1 0 1 1 1 1 Lipid II flippase MurJ Catalase_C PF18011.1 gi|91773962|ref|YP_566654.1| - 0.16 11.6 0.1 0.92 9.1 0.0 2.1 2 0 0 2 2 2 0 C-terminal domain found in long catalases UDPG_MGDP_dh_N PF03721.14 gi|91773963|ref|YP_566655.1| - 1.2e-34 119.5 0.0 2.8e-34 118.4 0.0 1.6 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 gi|91773963|ref|YP_566655.1| - 1.4e-21 76.9 0.0 3.1e-21 75.8 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 gi|91773963|ref|YP_566655.1| - 1.4e-19 70.1 0.0 3.2e-19 68.9 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 gi|91773963|ref|YP_566655.1| - 0.16 12.1 0.3 14 5.8 0.0 3.1 4 0 0 4 4 4 0 NAD binding domain of 6-phosphogluconate dehydrogenase GFO_IDH_MocA PF01408.22 gi|91773964|ref|YP_566656.1| - 6.3e-28 98.0 0.2 1.3e-27 96.9 0.1 1.6 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|91773964|ref|YP_566656.1| - 0.00018 21.5 0.0 0.00034 20.6 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Semialdhyde_dh PF01118.24 gi|91773964|ref|YP_566656.1| - 0.002 18.6 0.1 0.0045 17.4 0.1 1.7 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|91773964|ref|YP_566656.1| - 0.015 15.4 0.5 0.046 13.8 0.5 2.0 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus CoA_binding PF02629.19 gi|91773964|ref|YP_566656.1| - 0.039 14.6 0.0 0.09 13.5 0.0 1.6 1 0 0 1 1 1 0 CoA binding domain Shikimate_DH PF01488.20 gi|91773964|ref|YP_566656.1| - 0.055 13.5 0.2 0.44 10.6 0.0 2.2 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_2 PF03446.15 gi|91773964|ref|YP_566656.1| - 0.074 13.2 0.1 0.14 12.4 0.1 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|91773964|ref|YP_566656.1| - 0.1 13.2 0.0 0.26 11.9 0.0 1.8 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Gp_dh_N PF00044.24 gi|91773964|ref|YP_566656.1| - 0.12 12.8 0.1 0.32 11.4 0.1 1.8 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTP_transf_like PF01467.26 gi|91773965|ref|YP_566657.1| - 8.1e-12 45.5 0.0 9.4e-12 45.3 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like Pantoate_ligase PF02569.15 gi|91773965|ref|YP_566657.1| - 0.13 11.5 0.1 0.4 9.8 0.0 1.7 2 0 0 2 2 2 0 Pantoate-beta-alanine ligase FAD_syn PF06574.12 gi|91773965|ref|YP_566657.1| - 0.14 12.0 0.1 0.28 11.1 0.1 1.5 1 0 0 1 1 1 0 FAD synthetase YdjM PF04307.14 gi|91773966|ref|YP_566658.1| - 9.1e-17 60.9 8.8 1.1e-16 60.6 8.8 1.1 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase MASE2 PF05230.11 gi|91773966|ref|YP_566658.1| - 1.6 8.9 8.6 0.64 10.1 0.1 2.7 3 0 0 3 3 3 0 MASE2 domain Rad51 PF08423.11 gi|91773967|ref|YP_566659.1| - 1.8e-84 283.0 0.0 2.3e-84 282.7 0.0 1.1 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|91773967|ref|YP_566659.1| - 6.7e-12 45.8 0.6 2.6e-11 44.0 0.4 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain RecA PF00154.21 gi|91773967|ref|YP_566659.1| - 1.1e-11 44.7 0.3 7.1e-10 38.8 0.0 2.3 2 1 0 2 2 2 1 recA bacterial DNA recombination protein ATPase PF06745.13 gi|91773967|ref|YP_566659.1| - 7.4e-08 32.0 0.1 1.1e-07 31.4 0.1 1.3 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|91773967|ref|YP_566659.1| - 1.7e-06 27.8 0.0 2.5e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain HHH_2 PF12826.7 gi|91773967|ref|YP_566659.1| - 3e-06 27.2 0.3 7.9e-06 25.9 0.3 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif AAA_24 PF13479.6 gi|91773967|ref|YP_566659.1| - 0.0014 18.4 0.0 0.0033 17.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain DNA_pol_lambd_f PF10391.9 gi|91773967|ref|YP_566659.1| - 0.0022 17.8 0.0 0.0067 16.2 0.0 1.8 1 1 0 1 1 1 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|91773967|ref|YP_566659.1| - 0.0088 16.3 0.0 0.019 15.2 0.0 1.6 1 0 0 1 1 1 1 Pathogenicity locus HHH PF00633.23 gi|91773967|ref|YP_566659.1| - 0.01 15.7 0.3 1.2 9.1 0.4 2.6 2 0 0 2 2 2 0 Helix-hairpin-helix motif AAA_22 PF13401.6 gi|91773967|ref|YP_566659.1| - 0.011 16.0 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|91773967|ref|YP_566659.1| - 0.024 15.0 0.1 0.11 12.9 0.1 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|91773967|ref|YP_566659.1| - 0.034 14.1 0.1 0.15 12.0 0.1 2.0 1 1 0 1 1 1 0 NACHT domain CobU PF02283.16 gi|91773967|ref|YP_566659.1| - 0.037 13.6 0.0 0.4 10.2 0.0 2.1 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase RNA_pol_RpbG PF16992.5 gi|91773967|ref|YP_566659.1| - 0.12 12.5 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 DNA-directed RNA polymerase, subunit G AAA_18 PF13238.6 gi|91773967|ref|YP_566659.1| - 0.12 13.0 0.0 0.41 11.2 0.0 1.8 1 1 0 1 1 1 0 AAA domain Hydrolase_3 PF08282.12 gi|91773968|ref|YP_566660.1| - 2.1e-29 103.0 2.5 1.4e-18 67.5 0.9 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|91773968|ref|YP_566660.1| - 6e-10 39.8 1.3 0.00026 21.4 0.1 3.1 1 1 2 3 3 3 3 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|91773968|ref|YP_566660.1| - 2.6e-09 37.0 0.1 7.5e-08 32.2 0.0 2.0 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.7 gi|91773968|ref|YP_566660.1| - 0.0011 19.5 2.4 5.6 7.3 0.0 3.4 2 1 2 4 4 4 3 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|91773968|ref|YP_566660.1| - 0.056 13.5 0.9 0.35 10.9 0.9 2.2 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase PRC PF05239.16 gi|91773969|ref|YP_566661.1| - 8.3e-12 45.0 0.7 1e-11 44.7 0.7 1.1 1 0 0 1 1 1 1 PRC-barrel domain AAA PF00004.29 gi|91773970|ref|YP_566662.1| - 1.1e-98 326.8 0.1 1.9e-48 164.2 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|91773970|ref|YP_566662.1| - 2.4e-32 110.5 4.1 5.3e-17 61.3 1.4 3.0 2 1 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|91773970|ref|YP_566662.1| - 9.7e-29 99.4 0.1 3.4e-28 97.6 0.1 2.0 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_5 PF07728.14 gi|91773970|ref|YP_566662.1| - 6.7e-16 58.5 0.1 3.7e-07 30.2 0.0 3.3 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|91773970|ref|YP_566662.1| - 3.6e-15 56.0 0.1 6.5e-07 29.2 0.0 3.3 3 0 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|91773970|ref|YP_566662.1| - 5.2e-15 56.0 0.0 6e-06 26.5 0.0 2.8 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) CDC48_2 PF02933.17 gi|91773970|ref|YP_566662.1| - 3.7e-14 52.3 0.1 1.6e-13 50.2 0.1 2.1 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.6 gi|91773970|ref|YP_566662.1| - 9.7e-14 52.1 0.0 7.1e-05 23.2 0.0 3.9 2 2 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|91773970|ref|YP_566662.1| - 2.4e-11 44.0 0.8 0.0058 16.9 0.0 4.5 3 2 1 4 4 4 2 AAA domain AAA_14 PF13173.6 gi|91773970|ref|YP_566662.1| - 2.1e-10 40.7 0.0 6.2e-05 23.0 0.0 2.7 3 0 0 3 3 2 2 AAA domain TIP49 PF06068.13 gi|91773970|ref|YP_566662.1| - 7.1e-09 35.3 0.2 0.00015 21.1 0.0 3.0 2 1 1 3 3 3 2 TIP49 P-loop domain IstB_IS21 PF01695.17 gi|91773970|ref|YP_566662.1| - 2.8e-08 33.7 0.0 0.0059 16.3 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_18 PF13238.6 gi|91773970|ref|YP_566662.1| - 4.6e-08 33.7 0.0 0.018 15.6 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|91773970|ref|YP_566662.1| - 8.7e-08 32.4 0.0 0.0033 17.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 gi|91773970|ref|YP_566662.1| - 1.4e-07 31.2 0.0 0.0049 16.4 0.0 2.6 3 0 0 3 3 2 2 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|91773970|ref|YP_566662.1| - 3.1e-07 30.3 0.1 0.048 13.4 0.0 3.7 2 2 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|91773970|ref|YP_566662.1| - 4.7e-07 29.4 0.4 0.015 14.7 0.1 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI ATPase PF06745.13 gi|91773970|ref|YP_566662.1| - 1.3e-06 28.0 0.9 0.011 15.1 0.0 3.6 2 1 0 3 3 3 1 KaiC AAA_25 PF13481.6 gi|91773970|ref|YP_566662.1| - 1.3e-06 28.1 1.7 0.17 11.4 0.0 3.7 2 1 1 3 3 3 2 AAA domain RNA_helicase PF00910.22 gi|91773970|ref|YP_566662.1| - 2.3e-06 28.0 0.0 0.059 13.8 0.0 2.6 2 0 0 2 2 2 2 RNA helicase Zeta_toxin PF06414.12 gi|91773970|ref|YP_566662.1| - 2.9e-06 26.7 0.0 0.042 13.1 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin AAA_24 PF13479.6 gi|91773970|ref|YP_566662.1| - 3.7e-06 26.8 0.1 0.11 12.2 0.0 2.6 2 1 0 2 2 2 2 AAA domain Bac_DnaA PF00308.18 gi|91773970|ref|YP_566662.1| - 5.6e-06 26.3 0.0 0.088 12.6 0.0 2.5 2 1 0 2 2 2 2 Bacterial dnaA protein AAA_28 PF13521.6 gi|91773970|ref|YP_566662.1| - 6.7e-06 26.4 0.0 0.029 14.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain DUF2075 PF09848.9 gi|91773970|ref|YP_566662.1| - 1.4e-05 24.6 0.0 0.14 11.4 0.0 2.5 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) PhoH PF02562.16 gi|91773970|ref|YP_566662.1| - 2.4e-05 23.9 0.0 0.32 10.4 0.0 2.8 2 0 0 2 2 2 2 PhoH-like protein Parvo_NS1 PF01057.17 gi|91773970|ref|YP_566662.1| - 3e-05 23.3 0.2 0.18 10.9 0.1 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 ATPase_2 PF01637.18 gi|91773970|ref|YP_566662.1| - 3e-05 24.0 0.2 0.23 11.4 0.0 3.6 2 2 0 2 2 2 2 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|91773970|ref|YP_566662.1| - 6.9e-05 23.4 0.0 1 9.9 0.0 3.3 3 0 0 3 3 3 2 ABC transporter TsaE PF02367.17 gi|91773970|ref|YP_566662.1| - 0.00012 22.1 0.0 0.65 10.0 0.0 2.7 2 1 1 3 3 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE NB-ARC PF00931.22 gi|91773970|ref|YP_566662.1| - 0.00012 21.4 0.0 0.36 10.0 0.0 2.7 3 0 0 3 3 2 2 NB-ARC domain AAA_3 PF07726.11 gi|91773970|ref|YP_566662.1| - 0.00014 21.7 0.1 0.34 10.8 0.0 2.9 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 gi|91773970|ref|YP_566662.1| - 0.00015 22.2 0.2 0.39 11.1 0.0 3.6 3 1 0 3 3 2 1 AAA domain AAA_11 PF13086.6 gi|91773970|ref|YP_566662.1| - 0.00016 21.6 0.0 0.23 11.2 0.0 2.4 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.10 gi|91773970|ref|YP_566662.1| - 0.00019 21.3 0.3 0.54 10.3 0.1 2.7 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain AAA_19 PF13245.6 gi|91773970|ref|YP_566662.1| - 0.00026 21.3 0.8 1.1 9.6 0.0 3.0 2 1 0 3 3 2 2 AAA domain AAA_30 PF13604.6 gi|91773970|ref|YP_566662.1| - 0.00029 20.6 0.0 0.65 9.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain DUF815 PF05673.13 gi|91773970|ref|YP_566662.1| - 0.00038 19.7 0.0 0.55 9.3 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF815) ResIII PF04851.15 gi|91773970|ref|YP_566662.1| - 0.00091 19.3 0.0 1.1 9.2 0.0 2.9 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit NACHT PF05729.12 gi|91773970|ref|YP_566662.1| - 0.0011 19.0 0.1 3 7.8 0.0 3.2 2 2 1 3 3 3 1 NACHT domain Sigma54_activ_2 PF14532.6 gi|91773970|ref|YP_566662.1| - 0.0011 19.1 0.0 1.4 9.0 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain NTPase_1 PF03266.15 gi|91773970|ref|YP_566662.1| - 0.0018 18.2 0.8 3.8 7.4 0.0 3.5 2 1 1 3 3 3 0 NTPase TniB PF05621.11 gi|91773970|ref|YP_566662.1| - 0.0023 17.4 0.0 3.9 6.8 0.0 3.6 3 1 1 4 4 3 0 Bacterial TniB protein Cytidylate_kin PF02224.18 gi|91773970|ref|YP_566662.1| - 0.0037 17.0 0.2 5.2 6.7 0.0 3.3 3 0 0 3 3 3 0 Cytidylate kinase ATP-synt_ab PF00006.25 gi|91773970|ref|YP_566662.1| - 0.0044 16.7 0.0 1.5 8.4 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain T2SSE PF00437.20 gi|91773970|ref|YP_566662.1| - 0.0057 15.7 0.0 0.33 10.0 0.0 2.4 2 0 0 2 2 2 1 Type II/IV secretion system protein Guanylate_kin PF00625.21 gi|91773970|ref|YP_566662.1| - 0.0091 15.7 0.8 9.9 5.8 0.0 4.4 3 2 2 5 5 5 0 Guanylate kinase KAP_NTPase PF07693.14 gi|91773970|ref|YP_566662.1| - 0.0098 15.2 0.0 7.7 5.7 0.0 3.0 3 0 0 3 3 3 0 KAP family P-loop domain IPT PF01745.16 gi|91773970|ref|YP_566662.1| - 0.016 14.6 0.2 0.85 9.0 0.0 2.7 3 0 0 3 3 2 0 Isopentenyl transferase Zot PF05707.12 gi|91773970|ref|YP_566662.1| - 0.022 14.4 0.0 1.2 8.7 0.0 2.7 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) AFG1_ATPase PF03969.16 gi|91773970|ref|YP_566662.1| - 0.033 13.1 0.0 1.5 7.6 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase Rad17 PF03215.15 gi|91773970|ref|YP_566662.1| - 0.04 13.8 1.1 2.3 8.1 0.0 3.3 3 1 1 4 4 4 0 Rad17 P-loop domain CPT PF07931.12 gi|91773970|ref|YP_566662.1| - 0.092 12.6 0.0 12 5.7 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein SKI PF01202.22 gi|91773970|ref|YP_566662.1| - 0.096 12.8 0.1 15 5.7 0.0 2.6 2 0 0 2 2 2 0 Shikimate kinase Hydin_ADK PF17213.3 gi|91773970|ref|YP_566662.1| - 0.12 12.6 0.5 14 5.9 0.0 2.5 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain DAP3 PF10236.9 gi|91773970|ref|YP_566662.1| - 0.14 11.3 0.0 18 4.4 0.0 2.2 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 Epimerase PF01370.21 gi|91773971|ref|YP_566663.1| - 2.3e-59 200.8 0.0 2.8e-59 200.5 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|91773971|ref|YP_566663.1| - 9.6e-59 199.4 0.0 8e-58 196.4 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|91773971|ref|YP_566663.1| - 2e-21 76.2 0.0 2.7e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|91773971|ref|YP_566663.1| - 7.6e-19 67.9 0.1 3e-17 62.7 0.1 2.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|91773971|ref|YP_566663.1| - 3e-15 56.1 0.0 6.1e-15 55.1 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|91773971|ref|YP_566663.1| - 3.6e-13 49.3 0.0 2e-11 43.6 0.0 2.5 2 1 0 2 2 2 1 Male sterility protein NAD_binding_10 PF13460.6 gi|91773971|ref|YP_566663.1| - 4.4e-11 43.0 0.0 7.1e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|91773971|ref|YP_566663.1| - 0.00025 20.7 0.0 0.00058 19.5 0.0 1.6 1 1 0 1 1 1 1 NmrA-like family DapB_N PF01113.20 gi|91773971|ref|YP_566663.1| - 0.00033 20.8 0.0 0.00061 19.9 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus TrkA_N PF02254.18 gi|91773971|ref|YP_566663.1| - 0.0022 18.3 0.1 0.0036 17.5 0.1 1.4 1 1 0 1 1 1 1 TrkA-N domain KR PF08659.10 gi|91773971|ref|YP_566663.1| - 0.0068 16.3 0.1 0.63 9.9 0.1 2.3 1 1 0 1 1 1 1 KR domain Semialdhyde_dh PF01118.24 gi|91773971|ref|YP_566663.1| - 0.12 12.8 0.0 1.6 9.2 0.0 2.3 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain AAA_lid_10 PF17872.1 gi|91773971|ref|YP_566663.1| - 0.13 12.4 0.1 0.42 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA lid domain NLRC4_HD PF17889.1 gi|91773972|ref|YP_566664.1| - 0.064 13.6 1.7 0.13 12.6 1.7 1.6 1 1 0 1 1 1 0 NLRC4 helical domain RVT_1 PF00078.27 gi|91773973|ref|YP_566665.1| - 1.5e-42 145.6 0.1 3.3e-42 144.5 0.0 1.5 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_N PF13655.6 gi|91773973|ref|YP_566665.1| - 7.9e-28 96.5 2.4 7.9e-28 96.5 2.4 1.9 2 0 0 2 2 2 1 N-terminal domain of reverse transcriptase GIIM PF08388.11 gi|91773973|ref|YP_566665.1| - 3.5e-24 84.6 6.4 9.2e-24 83.3 6.4 1.8 1 0 0 1 1 1 1 Group II intron, maturase-specific domain Intron_maturas2 PF01348.21 gi|91773973|ref|YP_566665.1| - 0.019 14.9 3.5 0.14 12.1 0.5 3.6 3 1 0 3 3 3 0 Type II intron maturase HNH PF01844.23 gi|91773973|ref|YP_566665.1| - 0.12 12.5 3.4 0.26 11.5 3.4 1.6 1 0 0 1 1 1 0 HNH endonuclease DDE_Tnp_1 PF01609.21 gi|91773974|ref|YP_566666.1| - 0.034 13.8 0.3 0.037 13.7 0.3 1.1 1 0 0 1 1 1 0 Transposase DDE domain PSS PF03034.15 gi|91773974|ref|YP_566666.1| - 0.038 13.8 0.0 0.041 13.6 0.0 1.0 1 0 0 1 1 1 0 Phosphatidyl serine synthase NikR_C PF08753.11 gi|91773975|ref|YP_566667.1| - 7e-34 115.8 1.5 9.4e-34 115.4 1.5 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|91773975|ref|YP_566667.1| - 6.4e-08 32.3 0.1 1.8e-07 30.8 0.0 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|91773975|ref|YP_566667.1| - 0.012 15.8 0.0 0.037 14.1 0.0 1.8 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system RHH_8 PF17723.1 gi|91773975|ref|YP_566667.1| - 0.072 13.3 0.1 0.38 10.9 0.0 1.9 1 1 1 2 2 2 0 Ribbon-Helix-Helix transcriptional regulator family SAICAR_synt PF01259.18 gi|91773976|ref|YP_566668.1| - 1.4e-60 205.1 0.2 1.6e-60 204.8 0.2 1.1 1 0 0 1 1 1 1 SAICAR synthetase FA_synthesis PF02504.15 gi|91773976|ref|YP_566668.1| - 0.014 14.5 0.1 0.021 13.9 0.1 1.2 1 0 0 1 1 1 0 Fatty acid synthesis protein Amino_oxidase PF01593.24 gi|91773977|ref|YP_566669.1| - 9.8e-20 71.3 0.0 2.3e-19 70.0 0.0 1.7 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|91773977|ref|YP_566669.1| - 2.9e-18 65.9 0.1 5.8e-18 64.9 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|91773977|ref|YP_566669.1| - 6e-11 42.5 0.0 7.5e-08 32.3 0.0 2.4 2 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|91773977|ref|YP_566669.1| - 7.8e-10 38.4 0.7 7.2e-09 35.2 0.8 2.2 3 0 0 3 3 3 1 FAD binding domain FAD_oxidored PF12831.7 gi|91773977|ref|YP_566669.1| - 1.3e-08 34.7 0.0 1.9e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|91773977|ref|YP_566669.1| - 1.3e-07 30.7 0.6 3.3e-06 26.1 0.2 2.8 2 1 0 3 3 3 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|91773977|ref|YP_566669.1| - 1.6e-06 27.7 0.7 2.7e-06 26.9 0.7 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|91773977|ref|YP_566669.1| - 3.7e-06 26.4 0.0 3.3e-05 23.3 0.0 2.3 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GDI PF00996.18 gi|91773977|ref|YP_566669.1| - 5.5e-06 25.2 0.2 1.1e-05 24.2 0.2 1.5 1 0 0 1 1 1 1 GDP dissociation inhibitor Thi4 PF01946.17 gi|91773977|ref|YP_566669.1| - 1.5e-05 24.4 0.2 2.9e-05 23.4 0.2 1.5 2 0 0 2 2 2 1 Thi4 family Pyr_redox_3 PF13738.6 gi|91773977|ref|YP_566669.1| - 6.5e-05 22.3 0.0 0.002 17.4 0.1 2.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|91773977|ref|YP_566669.1| - 6.7e-05 22.1 0.4 0.00058 19.0 0.1 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|91773977|ref|YP_566669.1| - 0.00016 22.2 1.1 0.00033 21.2 0.4 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|91773977|ref|YP_566669.1| - 0.0084 15.4 0.0 0.013 14.8 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|91773977|ref|YP_566669.1| - 0.019 14.0 0.1 0.028 13.5 0.1 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein MCRA PF06100.11 gi|91773977|ref|YP_566669.1| - 0.13 11.1 0.0 0.21 10.3 0.0 1.3 1 0 0 1 1 1 0 MCRA family Trp_halogenase PF04820.14 gi|91773977|ref|YP_566669.1| - 0.2 10.4 0.7 0.3 9.9 0.7 1.2 1 0 0 1 1 1 0 Tryptophan halogenase PhoU_div PF01865.16 gi|91773978|ref|YP_566670.1| - 7e-51 172.6 5.5 7.9e-51 172.4 5.5 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.19 gi|91773978|ref|YP_566670.1| - 0.0036 17.7 1.4 0.0036 17.7 1.4 2.5 2 1 0 2 2 2 1 PhoU domain DUF1380 PF07128.12 gi|91773978|ref|YP_566670.1| - 0.026 14.7 0.9 0.084 13.1 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1380) G-alpha PF00503.20 gi|91773978|ref|YP_566670.1| - 0.11 11.6 0.2 0.13 11.4 0.2 1.1 1 0 0 1 1 1 0 G-protein alpha subunit PHO4 PF01384.20 gi|91773979|ref|YP_566671.1| - 4.7e-99 331.6 37.5 1.6e-98 329.8 37.5 1.7 1 1 0 1 1 1 1 Phosphate transporter family TPR_2 PF07719.17 gi|91773980|ref|YP_566672.1| - 1.4e-28 96.7 11.0 0.012 15.6 0.0 9.1 7 2 2 9 9 9 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|91773980|ref|YP_566672.1| - 1.3e-23 82.9 1.6 2.5e-06 27.5 0.1 5.8 3 2 1 5 5 5 4 Tetratricopeptide repeat TPR_1 PF00515.28 gi|91773980|ref|YP_566672.1| - 1.2e-22 78.7 11.1 0.042 13.7 0.2 9.1 8 1 1 9 9 9 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|91773980|ref|YP_566672.1| - 4.7e-21 75.1 6.6 0.0038 17.7 0.2 5.2 4 1 1 5 5 5 5 Tetratricopeptide repeat TPR_8 PF13181.6 gi|91773980|ref|YP_566672.1| - 8.5e-20 69.3 14.3 0.00023 21.1 0.0 8.6 7 2 2 9 9 9 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|91773980|ref|YP_566672.1| - 4.6e-17 62.4 0.3 0.00041 20.9 0.2 6.0 1 1 5 7 7 7 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|91773980|ref|YP_566672.1| - 1.1e-14 54.4 0.3 0.0093 16.2 0.1 5.0 2 1 4 6 6 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 gi|91773980|ref|YP_566672.1| - 5.4e-14 51.7 9.7 0.26 12.2 0.0 7.9 2 2 7 9 9 9 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|91773980|ref|YP_566672.1| - 6e-14 52.1 14.2 0.00044 20.5 0.1 6.9 2 2 4 6 6 6 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|91773980|ref|YP_566672.1| - 2e-13 49.8 6.0 0.014 15.1 0.3 7.1 6 1 2 8 8 8 3 TPR repeat TPR_17 PF13431.6 gi|91773980|ref|YP_566672.1| - 7.5e-13 47.9 0.0 0.14 12.6 0.0 6.8 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|91773980|ref|YP_566672.1| - 8.6e-10 38.0 6.3 0.038 14.0 0.1 6.6 5 2 1 6 6 5 2 Tetratricopeptide repeat NARP1 PF12569.8 gi|91773980|ref|YP_566672.1| - 1.5e-09 37.4 4.4 0.0033 16.4 1.6 3.9 2 1 2 4 4 4 2 NMDA receptor-regulated protein 1 TPR_6 PF13174.6 gi|91773980|ref|YP_566672.1| - 4e-06 27.1 4.4 9.9 7.1 0.0 6.8 7 1 1 8 8 7 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|91773980|ref|YP_566672.1| - 0.00019 21.4 0.9 0.18 11.9 0.1 4.4 5 0 0 5 5 4 1 Fis1 C-terminal tetratricopeptide repeat SNAP PF14938.6 gi|91773980|ref|YP_566672.1| - 0.00026 20.5 1.7 0.00026 20.5 1.7 2.3 2 1 2 4 4 4 1 Soluble NSF attachment protein, SNAP BTAD PF03704.17 gi|91773980|ref|YP_566672.1| - 0.00086 19.8 2.8 1.6 9.2 0.7 3.3 3 1 1 4 4 4 2 Bacterial transcriptional activator domain DUF3856 PF12968.7 gi|91773980|ref|YP_566672.1| - 0.0014 18.7 3.8 1.9 8.5 0.1 4.3 3 1 1 4 4 4 1 Domain of Unknown Function (DUF3856) Alkyl_sulf_dimr PF14863.6 gi|91773980|ref|YP_566672.1| - 0.0045 17.4 0.6 5.1 7.5 0.1 3.6 2 2 2 4 4 4 1 Alkyl sulfatase dimerisation TPR_21 PF09976.9 gi|91773980|ref|YP_566672.1| - 0.0066 16.2 4.2 0.087 12.5 0.2 3.2 2 2 1 3 3 3 1 Tetratricopeptide repeat-like domain HTH_Bact PF18768.1 gi|91773980|ref|YP_566672.1| - 0.0066 16.0 0.6 16 5.1 0.0 4.8 4 1 0 4 4 4 0 Helix-turn-helix bacterial domain TPR_MalT PF17874.1 gi|91773980|ref|YP_566672.1| - 0.0068 15.8 5.3 5.1 6.4 0.2 4.2 1 1 1 3 3 3 1 MalT-like TPR region SRP_TPR_like PF17004.5 gi|91773980|ref|YP_566672.1| - 0.019 15.0 0.4 1.4 8.9 0.0 3.3 2 1 1 3 3 3 0 Putative TPR-like repeat Nic96 PF04097.14 gi|91773980|ref|YP_566672.1| - 0.041 12.4 0.1 0.063 11.7 0.1 1.3 1 0 0 1 1 1 0 Nup93/Nic96 ChAPs PF09295.10 gi|91773980|ref|YP_566672.1| - 0.052 12.6 0.1 0.13 11.2 0.0 1.6 2 0 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) DUF1487 PF07368.11 gi|91773980|ref|YP_566672.1| - 0.052 13.0 0.0 0.39 10.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) COPI_C PF06957.11 gi|91773980|ref|YP_566672.1| - 0.055 12.2 0.0 0.1 11.3 0.0 1.4 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus SHNi-TPR PF10516.9 gi|91773980|ref|YP_566672.1| - 0.096 12.2 0.1 32 4.1 0.0 3.4 3 0 0 3 3 3 0 SHNi-TPR YfiO PF13525.6 gi|91773980|ref|YP_566672.1| - 0.097 12.4 0.3 8.6 6.0 0.0 2.4 2 0 0 2 2 2 0 Outer membrane lipoprotein PPR_1 PF12854.7 gi|91773980|ref|YP_566672.1| - 0.15 11.8 0.0 0.48 10.2 0.0 2.0 1 0 0 1 1 1 0 PPR repeat TPR_10 PF13374.6 gi|91773980|ref|YP_566672.1| - 0.2 11.6 8.1 11 6.0 0.1 5.8 7 0 0 7 7 7 0 Tetratricopeptide repeat ANAPC5 PF12862.7 gi|91773980|ref|YP_566672.1| - 1.3 9.2 5.7 70 3.6 0.8 4.5 2 2 1 3 3 3 0 Anaphase-promoting complex subunit 5 Nre_N PF04894.12 gi|91773981|ref|YP_566673.1| - 2.9e-106 355.2 0.0 4e-106 354.8 0.0 1.2 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|91773981|ref|YP_566673.1| - 9.8e-41 138.1 0.1 1.7e-40 137.4 0.1 1.4 1 0 0 1 1 1 1 Archaeal Nre, C-terminal Peptidase_C21 PF05381.12 gi|91773981|ref|YP_566673.1| - 0.15 12.4 0.0 0.28 11.5 0.0 1.4 1 0 0 1 1 1 0 Tymovirus endopeptidase HTH_3 PF01381.22 gi|91773982|ref|YP_566674.1| - 2.6e-05 24.2 0.0 4e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix Sigma70_r4 PF04545.16 gi|91773982|ref|YP_566674.1| - 0.00036 20.0 0.2 0.00067 19.1 0.0 1.5 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|91773982|ref|YP_566674.1| - 0.00046 19.7 0.0 0.00085 18.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 gi|91773982|ref|YP_566674.1| - 0.00099 19.5 0.0 0.0016 18.8 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain KORA PF16509.5 gi|91773982|ref|YP_566674.1| - 0.001 19.3 0.1 0.0024 18.1 0.1 1.6 1 1 0 1 1 1 1 TrfB plasmid transcriptional repressor HTH_Crp_2 PF13545.6 gi|91773982|ref|YP_566674.1| - 0.0039 17.1 0.0 0.0062 16.5 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_31 PF13560.6 gi|91773982|ref|YP_566674.1| - 0.0068 16.7 0.1 0.0098 16.2 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_17 PF12728.7 gi|91773982|ref|YP_566674.1| - 0.0084 16.3 0.0 0.016 15.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|91773982|ref|YP_566674.1| - 0.0091 15.9 0.1 0.015 15.2 0.1 1.3 1 0 0 1 1 1 1 MarR family Sigma70_r4_2 PF08281.12 gi|91773982|ref|YP_566674.1| - 0.0092 15.6 0.1 0.017 14.8 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 YdaS_antitoxin PF15943.5 gi|91773982|ref|YP_566674.1| - 0.021 14.7 0.0 0.063 13.1 0.0 1.8 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_40 PF14493.6 gi|91773982|ref|YP_566674.1| - 0.021 15.3 0.0 0.028 14.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|91773982|ref|YP_566674.1| - 0.03 14.1 0.0 0.046 13.5 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain P22_Cro PF14549.6 gi|91773982|ref|YP_566674.1| - 0.03 14.1 0.0 0.047 13.5 0.0 1.2 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro GerE PF00196.19 gi|91773982|ref|YP_566674.1| - 0.062 12.9 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_7 PF02796.15 gi|91773982|ref|YP_566674.1| - 0.095 12.8 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_29 PF13551.6 gi|91773982|ref|YP_566674.1| - 0.11 12.5 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix HTH_8 PF02954.19 gi|91773982|ref|YP_566674.1| - 0.12 12.2 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family SUI1 PF01253.22 gi|91773983|ref|YP_566675.1| - 3.2e-20 72.4 0.1 3.9e-20 72.1 0.1 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.15 gi|91773983|ref|YP_566675.1| - 0.013 15.3 0.9 0.017 14.9 0.9 1.2 1 0 0 1 1 1 0 DTW domain DUF192 PF02643.15 gi|91773984|ref|YP_566676.1| - 3.1e-25 88.1 0.0 3.5e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 AIRS_C PF02769.22 gi|91773985|ref|YP_566677.1| - 6.1e-48 162.9 7.2 1.6e-30 106.3 0.6 2.2 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|91773985|ref|YP_566677.1| - 3.4e-45 152.6 0.9 6.6e-24 84.4 0.0 2.9 3 0 0 3 3 3 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|91773985|ref|YP_566677.1| - 3e-07 30.9 0.2 1.4e-06 28.7 0.1 2.2 2 0 0 2 2 2 1 Formylglycinamide ribonucleotide amidotransferase linker domain HTH_ParB PF17762.1 gi|91773985|ref|YP_566677.1| - 0.1 12.4 0.0 0.29 11.0 0.0 1.7 1 0 0 1 1 1 0 HTH domain found in ParB protein HATPase_c PF02518.26 gi|91773986|ref|YP_566678.1| - 9.6e-05 22.9 0.0 0.0001 22.8 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|91773986|ref|YP_566678.1| - 0.0093 15.8 0.0 0.01 15.7 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ion_trans_2 PF07885.16 gi|91773988|ref|YP_566680.1| - 1.7e-16 60.0 8.1 2.4e-16 59.5 8.1 1.4 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 gi|91773988|ref|YP_566680.1| - 1.2e-08 34.6 1.9 1.4e-08 34.3 1.9 1.1 1 0 0 1 1 1 1 Ion transport protein IRK PF01007.20 gi|91773988|ref|YP_566680.1| - 0.83 9.5 4.4 4.4 7.1 4.4 1.9 1 1 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain DUF4405 PF14358.6 gi|91773988|ref|YP_566680.1| - 1.5 9.4 6.1 0.18 12.4 1.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) DUF4064 PF13273.6 gi|91773989|ref|YP_566681.1| - 1.2e-10 41.6 15.1 1.2e-10 41.6 15.1 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF4064) ATP_synt_H PF05493.13 gi|91773989|ref|YP_566681.1| - 0.16 12.5 0.4 0.16 12.5 0.4 2.1 2 0 0 2 2 2 0 ATP synthase subunit H PLDc_N PF13396.6 gi|91773990|ref|YP_566682.1| - 6.2e-10 38.9 0.0 6.2e-10 38.9 0.0 2.3 1 1 1 2 2 2 1 Phospholipase_D-nuclease N-terminal DUF2516 PF10724.9 gi|91773990|ref|YP_566682.1| - 6.7e-06 26.3 0.2 6.7e-06 26.3 0.2 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF2516) DUF4181 PF13789.6 gi|91773990|ref|YP_566682.1| - 0.00086 19.5 6.7 0.0058 16.9 0.8 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4181) TctB PF07331.11 gi|91773990|ref|YP_566682.1| - 0.00089 19.5 0.9 0.0011 19.2 0.9 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family EBP PF05241.12 gi|91773990|ref|YP_566682.1| - 0.013 14.9 0.4 0.016 14.7 0.4 1.1 1 0 0 1 1 1 0 Emopamil binding protein COX2_TM PF02790.15 gi|91773990|ref|YP_566682.1| - 0.032 14.4 5.2 6.7 6.9 3.0 2.7 2 1 1 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane domain EcsB PF05975.12 gi|91773990|ref|YP_566682.1| - 0.042 12.7 5.8 0.053 12.4 5.8 1.1 1 0 0 1 1 1 0 Bacterial ABC transporter protein EcsB DUF4153 PF13687.6 gi|91773990|ref|YP_566682.1| - 0.063 12.9 6.6 0.096 12.3 6.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4153) Bcl-2 PF00452.19 gi|91773990|ref|YP_566682.1| - 0.079 13.6 0.1 0.16 12.6 0.1 1.6 1 1 0 1 1 1 0 Apoptosis regulator proteins, Bcl-2 family Shisa PF13908.6 gi|91773990|ref|YP_566682.1| - 0.11 12.8 0.6 0.14 12.4 0.3 1.5 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator MSP1a PF11670.8 gi|91773990|ref|YP_566682.1| - 0.11 11.8 0.6 0.15 11.3 0.6 1.3 1 1 0 1 1 1 0 Major surface protein 1a (MSP1a) DUF4131 PF13567.6 gi|91773990|ref|YP_566682.1| - 0.47 10.1 5.9 0.19 11.3 2.6 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) FA_desaturase PF00487.24 gi|91773990|ref|YP_566682.1| - 1.2 8.9 4.0 0.52 10.1 1.2 1.6 1 1 1 2 2 2 0 Fatty acid desaturase DUF2207 PF09972.9 gi|91773990|ref|YP_566682.1| - 1.2 7.8 10.6 12 4.6 11.0 1.9 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) MgtE PF01769.16 gi|91773990|ref|YP_566682.1| - 4.5 7.7 8.8 21 5.5 8.8 1.9 1 1 0 1 1 1 0 Divalent cation transporter SdpI PF13630.6 gi|91773990|ref|YP_566682.1| - 8.6 6.6 9.7 4.2 7.6 5.4 2.0 2 0 0 2 2 2 0 SdpI/YhfL protein family DUF2070 PF09843.9 gi|91773991|ref|YP_566683.1| - 6.3 5.0 19.0 0.39 8.9 10.3 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2070) ABC_tran PF00005.27 gi|91773992|ref|YP_566684.1| - 1.4e-31 109.8 0.2 2.2e-31 109.2 0.2 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|91773992|ref|YP_566684.1| - 1e-15 58.4 1.6 6.8e-11 42.5 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system CbiA PF01656.23 gi|91773992|ref|YP_566684.1| - 0.015 15.4 0.0 0.024 14.7 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Rad17 PF03215.15 gi|91773992|ref|YP_566684.1| - 0.028 14.3 0.0 0.042 13.8 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_15 PF13175.6 gi|91773992|ref|YP_566684.1| - 0.031 14.0 7.4 0.049 13.3 0.4 2.7 2 1 0 3 3 3 0 AAA ATPase domain AAA_29 PF13555.6 gi|91773992|ref|YP_566684.1| - 0.096 12.4 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRP54 PF00448.22 gi|91773992|ref|YP_566684.1| - 0.1 12.2 0.2 0.18 11.4 0.2 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|91773992|ref|YP_566684.1| - 0.16 11.7 0.0 0.56 9.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|91773992|ref|YP_566684.1| - 0.17 11.1 0.0 0.29 10.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_23 PF13476.6 gi|91773992|ref|YP_566684.1| - 0.89 10.0 7.1 0.2 12.1 1.8 2.3 2 1 1 3 3 3 0 AAA domain ABC2_membrane_2 PF12679.7 gi|91773993|ref|YP_566685.1| - 4.4e-16 59.0 17.0 4.4e-16 59.0 17.0 2.1 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|91773993|ref|YP_566685.1| - 7.5e-06 25.3 33.0 7.5e-06 25.3 33.0 1.6 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|91773993|ref|YP_566685.1| - 6.6e-05 22.9 18.4 6.6e-05 22.9 18.4 1.8 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|91773993|ref|YP_566685.1| - 0.0039 16.8 27.8 0.0039 16.8 27.8 2.7 1 1 2 3 3 3 1 ABC-2 family transporter protein IRK PF01007.20 gi|91773994|ref|YP_566686.1| - 0.12 12.2 5.5 0.26 11.1 1.1 2.4 2 1 0 2 2 2 0 Inward rectifier potassium channel transmembrane domain DsbD PF02683.15 gi|91773996|ref|YP_566688.1| - 6.7e-19 68.6 19.6 6.7e-19 68.6 19.6 1.6 2 0 0 2 2 2 1 Cytochrome C biogenesis protein transmembrane region Thioredoxin_3 PF13192.6 gi|91773996|ref|YP_566688.1| - 1.8e-05 24.7 0.2 3.1e-05 24.0 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|91773996|ref|YP_566688.1| - 0.0015 18.7 0.2 0.0033 17.6 0.2 1.5 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 gi|91773996|ref|YP_566688.1| - 0.0025 18.2 0.4 0.0038 17.6 0.4 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin PF00085.20 gi|91773996|ref|YP_566688.1| - 0.045 13.8 0.1 0.066 13.2 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin ASFV_L11L PF05293.11 gi|91773996|ref|YP_566688.1| - 0.15 12.4 2.2 0.43 10.9 1.0 2.2 1 1 1 2 2 2 0 African swine fever virus (ASFV) L11L protein LapA_dom PF06305.11 gi|91773996|ref|YP_566688.1| - 0.65 9.8 0.1 0.65 9.8 0.1 4.8 4 2 1 5 5 5 0 Lipopolysaccharide assembly protein A domain DUF3918 PF13056.6 gi|91773996|ref|YP_566688.1| - 1.7 8.3 4.2 0.71 9.5 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) EMP70 PF02990.16 gi|91773996|ref|YP_566688.1| - 3.1 6.4 9.1 5.5 5.5 9.1 1.4 1 0 0 1 1 1 0 Endomembrane protein 70 UbiA PF01040.18 gi|91773999|ref|YP_566691.1| - 6.5e-29 101.0 13.8 8.2e-29 100.6 13.8 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family HTH_24 PF13412.6 gi|91774000|ref|YP_566692.1| - 6e-06 25.7 0.1 2.8e-05 23.6 0.1 2.1 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|91774000|ref|YP_566692.1| - 0.0018 18.2 0.0 0.0046 16.8 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_AsnC-type PF13404.6 gi|91774000|ref|YP_566692.1| - 0.011 15.6 0.1 0.026 14.3 0.0 1.7 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|91774000|ref|YP_566692.1| - 0.016 15.3 0.0 0.03 14.5 0.0 1.5 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_20 PF12840.7 gi|91774000|ref|YP_566692.1| - 0.058 13.5 0.0 0.52 10.4 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 gi|91774000|ref|YP_566692.1| - 0.13 12.2 0.0 0.28 11.1 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Aminotran_5 PF00266.19 gi|91774001|ref|YP_566693.1| - 4.5e-126 420.7 0.0 5.1e-126 420.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|91774001|ref|YP_566693.1| - 1.2e-08 34.7 0.1 1.8e-08 34.1 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|91774001|ref|YP_566693.1| - 2e-07 29.9 0.0 2.6e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|91774001|ref|YP_566693.1| - 0.00037 19.9 0.0 0.00066 19.1 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase SepSecS PF05889.13 gi|91774001|ref|YP_566693.1| - 0.1 11.3 0.0 0.34 9.6 0.0 1.7 1 1 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS YcaO PF02624.16 gi|91774002|ref|YP_566694.1| - 8.7e-88 294.7 0.1 1.3e-87 294.1 0.1 1.2 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding TfuA PF07812.12 gi|91774003|ref|YP_566695.1| - 9.4e-47 157.7 0.0 1.4e-46 157.1 0.0 1.3 1 0 0 1 1 1 1 TfuA-like protein Fe_dep_repr_C PF02742.15 gi|91774004|ref|YP_566696.1| - 4.3e-15 55.5 0.0 8.1e-15 54.7 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|91774004|ref|YP_566696.1| - 1.2e-11 44.6 0.0 1.8e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 gi|91774004|ref|YP_566696.1| - 4.1e-05 23.4 0.0 9.7e-05 22.2 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|91774004|ref|YP_566696.1| - 0.00025 20.9 0.0 0.0004 20.3 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|91774004|ref|YP_566696.1| - 0.00028 21.3 0.0 0.00046 20.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|91774004|ref|YP_566696.1| - 0.0038 17.1 0.0 0.008 16.0 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|91774004|ref|YP_566696.1| - 0.039 13.5 0.0 0.29 10.7 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|91774004|ref|YP_566696.1| - 0.047 14.0 0.0 0.072 13.5 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_38 PF13936.6 gi|91774004|ref|YP_566696.1| - 0.047 13.5 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain RuvB_C PF05491.13 gi|91774004|ref|YP_566696.1| - 0.061 13.2 0.0 0.44 10.5 0.0 2.3 2 1 0 2 2 2 0 RuvB C-terminal winged helix domain HTH_IclR PF09339.10 gi|91774004|ref|YP_566696.1| - 0.066 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|91774004|ref|YP_566696.1| - 0.11 12.5 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_micro PF17007.5 gi|91774004|ref|YP_566696.1| - 0.11 11.2 0.0 0.15 10.9 0.0 1.1 1 0 0 1 1 1 0 HTH-like HTH_5 PF01022.20 gi|91774004|ref|YP_566696.1| - 0.15 12.0 0.0 0.39 10.6 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|91774004|ref|YP_566696.1| - 0.16 11.9 0.1 0.32 11.0 0.0 1.6 2 0 0 2 2 2 0 HTH domain NUDIX PF00293.28 gi|91774005|ref|YP_566697.1| - 8.2e-21 74.4 0.0 3.1e-20 72.6 0.0 1.9 2 0 0 2 2 2 1 NUDIX domain zf-NADH-PPase PF09297.11 gi|91774005|ref|YP_566697.1| - 2.2e-08 33.6 4.6 3.3e-08 33.0 4.6 1.3 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain NUDIX-like PF09296.11 gi|91774005|ref|YP_566697.1| - 1.1e-05 26.0 0.0 2e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase-like rudimentary NUDIX domain DUF4010 PF13194.6 gi|91774006|ref|YP_566698.1| - 3.1e-48 164.2 24.3 3.1e-48 164.2 24.3 2.6 2 1 0 2 2 2 1 Domain of unknown function (DUF4010) MgtC PF02308.16 gi|91774006|ref|YP_566698.1| - 2.1e-21 76.5 12.4 2.1e-21 76.5 12.4 4.3 3 2 0 3 3 3 1 MgtC family Trp_oprn_chp PF09534.10 gi|91774006|ref|YP_566698.1| - 0.27 11.0 6.4 3.3 7.5 0.0 2.9 3 0 0 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Nitro_FeMo-Co PF02579.17 gi|91774007|ref|YP_566699.1| - 2.3e-21 75.9 0.0 2.7e-21 75.7 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor Endonuc-PvuII PF09225.10 gi|91774007|ref|YP_566699.1| - 0.059 13.1 0.1 0.074 12.8 0.1 1.2 1 0 0 1 1 1 0 Restriction endonuclease PvuII PrpR_N PF06506.11 gi|91774007|ref|YP_566699.1| - 0.11 12.1 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Propionate catabolism activator Lactamase_B PF00753.27 gi|91774008|ref|YP_566700.1| - 1.8e-11 44.4 0.0 2.2e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|91774008|ref|YP_566700.1| - 3.8e-09 36.4 0.0 6.2e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|91774008|ref|YP_566700.1| - 1.3e-06 27.9 0.0 1.9e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|91774008|ref|YP_566700.1| - 0.022 14.6 0.0 0.031 14.2 0.0 1.2 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF1847 PF08901.11 gi|91774009|ref|YP_566701.1| - 1.8e-52 177.2 2.9 2.2e-52 176.9 2.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1847) Fer4 PF00037.27 gi|91774010|ref|YP_566702.1| - 2.7e-09 36.5 12.6 1.1e-05 25.0 3.3 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91774010|ref|YP_566702.1| - 1.7e-08 34.9 6.5 0.00075 20.0 0.9 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain CbiA PF01656.23 gi|91774010|ref|YP_566702.1| - 4.7e-07 29.9 0.0 6.5e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_2 PF12797.7 gi|91774010|ref|YP_566702.1| - 3.5e-06 26.8 11.0 0.0046 17.0 2.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain ParA PF10609.9 gi|91774010|ref|YP_566702.1| - 1.3e-05 24.8 0.0 2.7e-05 23.7 0.0 1.6 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Fer4_8 PF13183.6 gi|91774010|ref|YP_566702.1| - 1.5e-05 25.3 2.2 0.036 14.5 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|91774010|ref|YP_566702.1| - 2.8e-05 24.0 12.6 0.023 14.8 2.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91774010|ref|YP_566702.1| - 0.00011 22.3 12.4 0.00027 21.0 12.4 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91774010|ref|YP_566702.1| - 0.00014 21.9 12.8 0.00035 20.6 12.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91774010|ref|YP_566702.1| - 0.00044 20.4 13.1 0.0033 17.5 13.4 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain FTHFS PF01268.19 gi|91774010|ref|YP_566702.1| - 0.0012 17.2 0.0 0.0049 15.1 0.0 1.8 2 0 0 2 2 2 1 Formate--tetrahydrofolate ligase Fer4_4 PF12800.7 gi|91774010|ref|YP_566702.1| - 0.0035 17.7 16.2 0.019 15.4 1.7 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain RsgA_GTPase PF03193.16 gi|91774010|ref|YP_566702.1| - 0.0036 17.2 0.0 0.0053 16.7 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase Fer4_16 PF13484.6 gi|91774010|ref|YP_566702.1| - 0.0096 16.8 10.2 0.2 12.6 1.4 2.7 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain GTP_EFTU PF00009.27 gi|91774010|ref|YP_566702.1| - 0.055 13.0 0.0 0.082 12.4 0.0 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Fer4_15 PF13459.6 gi|91774010|ref|YP_566702.1| - 0.11 13.2 4.9 1.4 9.7 0.1 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain AAA_31 PF13614.6 gi|91774010|ref|YP_566702.1| - 0.13 12.1 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Fer4_17 PF13534.6 gi|91774010|ref|YP_566702.1| - 1.8 9.2 15.3 7.1 7.3 4.1 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain Nitro_FeMo-Co PF02579.17 gi|91774011|ref|YP_566703.1| - 2.4e-20 72.6 0.2 3.9e-20 72.0 0.0 1.4 2 0 0 2 2 2 1 Dinitrogenase iron-molybdenum cofactor FeThRed_A PF02941.15 gi|91774011|ref|YP_566703.1| - 0.11 12.7 0.1 0.83 9.8 0.0 2.0 2 0 0 2 2 2 0 Ferredoxin thioredoxin reductase variable alpha chain Nitro_FeMo-Co PF02579.17 gi|91774012|ref|YP_566704.1| - 1.1e-24 86.6 0.0 1.3e-24 86.3 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor BacA PF02673.18 gi|91774013|ref|YP_566705.1| - 1e-52 179.4 14.7 1.2e-52 179.2 14.7 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA PspC PF04024.12 gi|91774013|ref|YP_566705.1| - 0.036 13.9 1.5 6.3 6.7 0.0 2.8 2 1 0 2 2 2 0 PspC domain URO-D PF01208.17 gi|91774014|ref|YP_566706.1| - 2.3e-71 240.7 0.1 2.6e-71 240.6 0.1 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) NAD_binding_7 PF13241.6 gi|91774015|ref|YP_566707.1| - 4.7e-06 27.0 0.0 1.2e-05 25.7 0.0 1.6 2 0 0 2 2 2 1 Putative NAD(P)-binding 3HCDH_N PF02737.18 gi|91774015|ref|YP_566707.1| - 1.4e-05 25.0 0.0 2.8e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|91774015|ref|YP_566707.1| - 2.5e-05 24.5 0.1 4.7e-05 23.6 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|91774015|ref|YP_566707.1| - 0.00017 21.0 0.0 0.00028 20.3 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|91774015|ref|YP_566707.1| - 0.00084 19.9 0.0 0.01 16.4 0.0 2.6 2 1 1 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent adh_short PF00106.25 gi|91774015|ref|YP_566707.1| - 0.0012 18.3 0.0 0.023 14.2 0.0 2.2 2 0 0 2 2 2 1 short chain dehydrogenase TrkA_N PF02254.18 gi|91774015|ref|YP_566707.1| - 0.0016 18.7 0.0 0.0028 17.9 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|91774015|ref|YP_566707.1| - 0.013 14.8 0.0 0.02 14.2 0.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_2 PF07992.14 gi|91774015|ref|YP_566707.1| - 0.047 12.9 0.0 0.073 12.3 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase IlvN PF07991.12 gi|91774015|ref|YP_566707.1| - 0.071 12.7 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 gi|91774015|ref|YP_566707.1| - 0.08 13.0 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Mur_ligase PF01225.25 gi|91774015|ref|YP_566707.1| - 0.085 13.2 0.3 6.3 7.2 0.1 2.3 1 1 1 2 2 2 0 Mur ligase family, catalytic domain Sacchrp_dh_NADP PF03435.18 gi|91774015|ref|YP_566707.1| - 0.092 13.0 0.0 0.18 12.1 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ATPgrasp_Ter PF15632.6 gi|91774016|ref|YP_566708.1| - 4e-10 39.6 0.0 9.6e-10 38.3 0.0 1.5 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|91774016|ref|YP_566708.1| - 2.8e-09 37.2 0.0 4.7e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|91774016|ref|YP_566708.1| - 0.0002 21.2 0.3 0.14 11.9 0.1 2.8 3 0 0 3 3 3 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Dala_Dala_lig_C PF07478.13 gi|91774016|ref|YP_566708.1| - 0.0025 17.4 0.1 0.0089 15.6 0.1 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_4 PF13535.6 gi|91774016|ref|YP_566708.1| - 0.018 14.6 0.7 0.64 9.6 0.3 2.4 1 1 1 2 2 2 0 ATP-grasp domain ATPgrasp_N PF18130.1 gi|91774016|ref|YP_566708.1| - 0.083 13.5 0.0 0.3 11.7 0.0 1.8 2 0 0 2 2 2 0 ATP-grasp N-terminal domain Radical_SAM PF04055.21 gi|91774017|ref|YP_566709.1| - 1.5e-11 44.9 0.6 3.2e-11 43.9 0.3 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|91774017|ref|YP_566709.1| - 4.3e-07 30.1 0.2 9.1e-07 29.0 0.2 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|91774017|ref|YP_566709.1| - 6.2e-07 29.8 0.2 1.4e-06 28.6 0.1 1.6 1 1 0 1 1 1 1 4Fe-4S single cluster domain His_biosynth PF00977.21 gi|91774017|ref|YP_566709.1| - 0.017 14.6 0.0 0.037 13.5 0.0 1.5 2 0 0 2 2 2 0 Histidine biosynthesis protein tRNA-synt_2d PF01409.20 gi|91774018|ref|YP_566710.1| - 7.4e-14 51.8 0.0 2e-12 47.1 0.0 2.4 1 1 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 gi|91774018|ref|YP_566710.1| - 3.8e-07 29.5 0.2 1e-05 24.8 0.1 2.7 2 1 0 2 2 2 1 tRNA synthetases class II (D, K and N) tRNA_synthFbeta PF17759.1 gi|91774018|ref|YP_566710.1| - 7.7e-07 28.8 0.0 1.2e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2b PF00587.25 gi|91774018|ref|YP_566710.1| - 1.2e-06 28.7 0.0 3.8e-06 27.0 0.0 1.9 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_His PF13393.6 gi|91774018|ref|YP_566710.1| - 0.0071 15.7 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase Zn_ribbon_recom PF13408.6 gi|91774018|ref|YP_566710.1| - 0.069 13.7 1.0 0.17 12.4 1.0 1.7 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain Aminotran_1_2 PF00155.21 gi|91774019|ref|YP_566711.1| - 4.7e-51 174.1 0.0 5.8e-51 173.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II zf-like PF04071.12 gi|91774019|ref|YP_566711.1| - 4.2e-23 81.1 11.0 1.8e-22 79.0 11.5 1.8 2 0 0 2 2 2 1 Cysteine-rich small domain Cys_Met_Meta_PP PF01053.20 gi|91774019|ref|YP_566711.1| - 0.0096 14.5 0.0 0.015 13.9 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Prefoldin_2 PF01920.20 gi|91774019|ref|YP_566711.1| - 0.039 13.9 0.0 0.082 12.9 0.0 1.4 1 0 0 1 1 1 0 Prefoldin subunit NTP_transf_3 PF12804.7 gi|91774020|ref|YP_566712.1| - 1.1e-11 45.3 0.0 1.5e-11 44.9 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|91774020|ref|YP_566712.1| - 7.1e-05 22.8 0.0 0.0001 22.3 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase IspD PF01128.19 gi|91774020|ref|YP_566712.1| - 0.00056 19.7 0.0 0.00075 19.3 0.0 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Aminotran_1_2 PF00155.21 gi|91774021|ref|YP_566713.1| - 1.5e-44 152.7 0.0 2e-44 152.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II zf-like PF04071.12 gi|91774021|ref|YP_566713.1| - 6.3e-27 93.3 6.3 1.5e-26 92.1 6.3 1.7 1 0 0 1 1 1 1 Cysteine-rich small domain Cys_Met_Meta_PP PF01053.20 gi|91774021|ref|YP_566713.1| - 0.037 12.6 0.0 0.056 12.0 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme DUF1246 PF06849.12 gi|91774021|ref|YP_566713.1| - 0.097 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1246) CobD_Cbib PF03186.13 gi|91774022|ref|YP_566714.1| - 3.7e-94 315.0 0.3 4.7e-94 314.7 0.3 1.2 1 0 0 1 1 1 1 CobD/Cbib protein AmpE PF17113.5 gi|91774022|ref|YP_566714.1| - 0.088 12.1 0.0 0.088 12.1 0.0 1.9 3 0 0 3 3 3 0 Regulatory signalling modulator protein AmpE Renin_r PF07850.14 gi|91774022|ref|YP_566714.1| - 2.8 8.6 5.3 32 5.2 0.5 2.5 2 0 0 2 2 2 0 Renin receptor-like protein PgpA PF04608.13 gi|91774023|ref|YP_566715.1| - 3.6e-09 36.8 0.0 4.3e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A CobS PF02654.15 gi|91774024|ref|YP_566716.1| - 3.6e-34 118.8 14.9 4.2e-34 118.5 14.9 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase YtpI PF14007.6 gi|91774024|ref|YP_566716.1| - 0.015 15.4 0.3 0.015 15.4 0.3 3.9 3 1 1 4 4 4 0 YtpI-like protein NTP_transf_3 PF12804.7 gi|91774025|ref|YP_566717.1| - 1.8e-11 44.6 0.0 2.5e-11 44.2 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|91774025|ref|YP_566717.1| - 3.9e-08 33.5 0.0 6.7e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase IspD PF01128.19 gi|91774025|ref|YP_566717.1| - 3.4e-06 27.0 0.0 5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF3865 PF12981.7 gi|91774025|ref|YP_566717.1| - 0.024 14.5 0.1 0.032 14.1 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3865) DUF2064 PF09837.9 gi|91774025|ref|YP_566717.1| - 0.05 13.4 0.0 0.068 13.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2064) CofC PF01983.16 gi|91774025|ref|YP_566717.1| - 0.09 12.0 0.2 0.17 11.0 0.0 1.6 2 0 0 2 2 2 0 Guanylyl transferase CofC like NTP_transferase PF00483.23 gi|91774025|ref|YP_566717.1| - 0.1 12.1 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Nucleotidyl transferase ATPase PF06745.13 gi|91774027|ref|YP_566719.1| - 5.4e-48 163.3 1.4 6.2e-48 163.2 1.4 1.0 1 0 0 1 1 1 1 KaiC GvpD PF07088.11 gi|91774027|ref|YP_566719.1| - 4e-07 29.0 0.5 7e-07 28.2 0.4 1.4 1 1 1 2 2 2 1 GvpD gas vesicle protein Rad51 PF08423.11 gi|91774027|ref|YP_566719.1| - 4.7e-06 26.0 1.1 0.0013 18.1 0.8 2.9 2 1 1 3 3 3 1 Rad51 DnaB_C PF03796.15 gi|91774027|ref|YP_566719.1| - 0.00026 20.4 0.5 0.00046 19.6 0.2 1.8 2 1 0 2 2 2 1 DnaB-like helicase C terminal domain AAA_25 PF13481.6 gi|91774027|ref|YP_566719.1| - 0.0015 18.1 0.0 0.0026 17.3 0.0 1.4 1 1 0 1 1 1 1 AAA domain MEDS PF14417.6 gi|91774027|ref|YP_566719.1| - 0.0048 16.7 0.0 0.0072 16.2 0.0 1.2 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAXNEB PF05625.11 gi|91774027|ref|YP_566719.1| - 0.0073 15.5 0.4 0.02 14.0 0.1 1.6 2 0 0 2 2 2 1 PAXNEB protein AAA PF00004.29 gi|91774027|ref|YP_566719.1| - 0.0098 16.3 1.2 0.029 14.8 1.2 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|91774027|ref|YP_566719.1| - 0.018 15.3 0.0 0.029 14.6 0.0 1.4 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|91774027|ref|YP_566719.1| - 0.021 14.6 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 gi|91774027|ref|YP_566719.1| - 0.053 12.8 0.1 0.079 12.2 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_24 PF13479.6 gi|91774027|ref|YP_566719.1| - 0.12 12.1 0.6 0.24 11.1 0.6 1.5 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|91774027|ref|YP_566719.1| - 0.25 10.8 1.0 0.47 9.9 0.3 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region DUF5591 PF17884.1 gi|91774028|ref|YP_566720.1| - 4.8e-18 65.5 0.1 7e-18 65.0 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) DUF508 PF04370.12 gi|91774028|ref|YP_566720.1| - 0.06 13.1 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF508) TrmB PF01978.19 gi|91774029|ref|YP_566721.1| - 1.4e-17 63.3 0.0 2e-17 62.8 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|91774029|ref|YP_566721.1| - 0.0007 19.5 0.0 0.0011 18.9 0.0 1.3 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|91774029|ref|YP_566721.1| - 0.001 18.9 0.0 0.0018 18.2 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|91774029|ref|YP_566721.1| - 0.0013 18.5 0.0 0.0021 17.9 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|91774029|ref|YP_566721.1| - 0.0015 18.3 0.0 0.0021 17.8 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|91774029|ref|YP_566721.1| - 0.0083 15.7 0.0 0.015 14.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|91774029|ref|YP_566721.1| - 0.021 15.3 0.0 0.037 14.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|91774029|ref|YP_566721.1| - 0.023 14.7 0.0 0.035 14.1 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|91774029|ref|YP_566721.1| - 0.066 13.1 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family VirJ PF06057.11 gi|91774030|ref|YP_566722.1| - 0.0048 16.8 0.0 0.0057 16.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial virulence protein (VirJ) Aminotran_1_2 PF00155.21 gi|91774031|ref|YP_566723.1| - 1.9e-69 234.6 0.0 2.2e-69 234.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|91774031|ref|YP_566723.1| - 1.7e-12 47.3 0.2 2.5e-12 46.8 0.2 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|91774031|ref|YP_566723.1| - 1.9e-08 33.7 0.0 3.5e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|91774031|ref|YP_566723.1| - 1.5e-05 23.7 0.1 2.4e-05 23.0 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.20 gi|91774031|ref|YP_566723.1| - 0.023 13.5 0.0 0.032 12.9 0.0 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Aminotran_3 PF00202.21 gi|91774031|ref|YP_566723.1| - 0.054 12.1 0.1 0.066 11.9 0.1 1.1 1 0 0 1 1 1 0 Aminotransferase class-III AsnC_trans_reg PF01037.21 gi|91774032|ref|YP_566724.1| - 1.3e-14 53.9 0.1 2.3e-14 53.1 0.1 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|91774032|ref|YP_566724.1| - 5.6e-08 32.5 0.1 1.8e-07 30.9 0.0 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|91774032|ref|YP_566724.1| - 1.2e-07 31.2 0.4 3.4e-07 29.7 0.2 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding DUF4423 PF14394.6 gi|91774032|ref|YP_566724.1| - 0.0044 16.8 0.1 0.0098 15.6 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_20 PF12840.7 gi|91774032|ref|YP_566724.1| - 0.023 14.8 0.0 0.047 13.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_47 PF16221.5 gi|91774032|ref|YP_566724.1| - 0.061 12.9 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 winged helix-turn-helix HTH_Crp_2 PF13545.6 gi|91774032|ref|YP_566724.1| - 0.082 12.9 0.1 0.22 11.5 0.0 1.7 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Phage_rep_O PF04492.13 gi|91774032|ref|YP_566724.1| - 0.088 13.4 0.2 0.8 10.3 0.0 2.2 2 1 0 2 2 2 0 Bacteriophage replication protein O PnpCD_PnpD_N PF18191.1 gi|91774032|ref|YP_566724.1| - 0.1 12.2 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Hydroquinone 1,2-dioxygenase large subunit N-terminal NUSAP PF16006.5 gi|91774032|ref|YP_566724.1| - 0.12 12.2 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Nucleolar and spindle-associated protein Ribosomal_S8e PF01201.22 gi|91774033|ref|YP_566725.1| - 6.7e-35 120.2 4.5 7.6e-35 120.1 4.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e Lactamase_B_2 PF12706.7 gi|91774034|ref|YP_566726.1| - 2.2e-21 76.3 0.0 7.9e-19 68.0 0.0 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|91774034|ref|YP_566726.1| - 1.6e-10 41.4 0.0 8.5e-10 39.0 0.0 2.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|91774034|ref|YP_566726.1| - 5e-05 22.9 0.0 0.00011 21.8 0.0 1.5 1 0 0 1 1 1 1 tRNase Z endonuclease PDEase_II PF02112.15 gi|91774034|ref|YP_566726.1| - 0.079 12.1 0.0 0.17 11.0 0.0 1.5 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II Nbs1_C PF08599.10 gi|91774034|ref|YP_566726.1| - 0.17 12.1 0.1 0.35 11.0 0.1 1.4 1 0 0 1 1 1 0 DNA damage repair protein Nbs1 DDE_Tnp_IS66 PF03050.14 gi|91774036|ref|YP_566728.1| - 1.9e-67 227.7 0.4 6.3e-67 226.0 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91774036|ref|YP_566728.1| - 9e-11 42.0 3.8 2.7e-10 40.5 3.8 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 SlyX PF04102.12 gi|91774036|ref|YP_566728.1| - 5.2e-05 23.8 0.7 0.00014 22.4 0.7 1.7 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91774036|ref|YP_566728.1| - 0.00011 22.5 0.3 0.17 12.1 0.2 2.8 3 0 0 3 3 3 2 DDE domain BST2 PF16716.5 gi|91774036|ref|YP_566728.1| - 0.067 13.8 1.4 0.3 11.7 1.4 2.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Zn_Tnp_IS1595 PF12760.7 gi|91774036|ref|YP_566728.1| - 0.14 12.2 2.7 0.83 9.7 0.8 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF16 PF01519.16 gi|91774036|ref|YP_566728.1| - 0.14 12.7 2.6 0.55 10.7 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF16 Lar_restr_allev PF14354.6 gi|91774036|ref|YP_566728.1| - 0.36 11.2 6.9 0.52 10.7 4.5 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91774036|ref|YP_566728.1| - 1 10.1 8.9 7.1 7.4 1.5 3.6 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PLATZ PF04640.14 gi|91774036|ref|YP_566728.1| - 2.1 9.0 6.0 0.65 10.7 1.1 2.7 2 1 0 2 2 2 0 PLATZ transcription factor Trep_dent_lipo PF09710.10 gi|91774037|ref|YP_566729.1| - 0.011 14.6 0.0 0.012 14.6 0.0 1.0 1 0 0 1 1 1 0 Treponema clustered lipoprotein (Trep_dent_lipo) AAA PF00004.29 gi|91774038|ref|YP_566730.1| - 1.8e-38 131.9 0.1 3.7e-38 130.9 0.0 1.6 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 gi|91774038|ref|YP_566730.1| - 1.2e-07 32.0 0.0 3.2e-07 30.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) TIP49 PF06068.13 gi|91774038|ref|YP_566730.1| - 3.8e-07 29.6 0.1 1.4e-06 27.8 0.0 2.0 2 1 1 3 3 3 1 TIP49 P-loop domain AAA_lid_3 PF17862.1 gi|91774038|ref|YP_566730.1| - 7.9e-07 28.8 0.1 1.9e-06 27.6 0.1 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 gi|91774038|ref|YP_566730.1| - 2.6e-06 27.5 0.1 2e-05 24.6 0.1 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|91774038|ref|YP_566730.1| - 3.3e-05 24.2 0.6 0.0022 18.3 0.0 2.6 1 1 1 2 2 2 1 AAA domain Bac_DnaA PF00308.18 gi|91774038|ref|YP_566730.1| - 5.5e-05 23.1 0.0 8.8e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial dnaA protein AAA_16 PF13191.6 gi|91774038|ref|YP_566730.1| - 0.0001 22.7 0.2 0.0025 18.2 0.2 2.6 1 1 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.17 gi|91774038|ref|YP_566730.1| - 0.00023 21.0 0.0 0.00043 20.0 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein RuvB_N PF05496.12 gi|91774038|ref|YP_566730.1| - 0.00029 20.6 0.0 0.0012 18.7 0.0 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_28 PF13521.6 gi|91774038|ref|YP_566730.1| - 0.00049 20.4 0.0 0.0016 18.7 0.0 2.0 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|91774038|ref|YP_566730.1| - 0.0012 18.2 0.1 0.0028 17.1 0.1 1.7 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|91774038|ref|YP_566730.1| - 0.0016 18.0 0.0 0.031 13.8 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_18 PF13238.6 gi|91774038|ref|YP_566730.1| - 0.0029 18.2 0.0 0.0092 16.5 0.0 1.9 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|91774038|ref|YP_566730.1| - 0.0041 16.3 0.0 0.009 15.2 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF815) TniB PF05621.11 gi|91774038|ref|YP_566730.1| - 0.0059 16.0 0.0 0.095 12.1 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein AAA_33 PF13671.6 gi|91774038|ref|YP_566730.1| - 0.0061 16.7 0.0 0.012 15.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|91774038|ref|YP_566730.1| - 0.012 16.0 0.0 0.042 14.3 0.0 2.0 2 0 0 2 2 2 0 RNA helicase Sigma54_activat PF00158.26 gi|91774038|ref|YP_566730.1| - 0.02 14.6 0.0 0.061 13.0 0.0 1.8 1 1 1 2 2 2 0 Sigma-54 interaction domain PduV-EutP PF10662.9 gi|91774038|ref|YP_566730.1| - 0.024 14.4 0.0 0.08 12.7 0.0 1.9 2 0 0 2 2 1 0 Ethanolamine utilisation - propanediol utilisation AAA_24 PF13479.6 gi|91774038|ref|YP_566730.1| - 0.027 14.2 0.0 0.058 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Parvo_NS1 PF01057.17 gi|91774038|ref|YP_566730.1| - 0.043 12.9 0.1 0.077 12.1 0.1 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 NACHT PF05729.12 gi|91774038|ref|YP_566730.1| - 0.043 13.7 0.2 0.21 11.5 0.1 2.0 1 1 1 2 2 2 0 NACHT domain TsaE PF02367.17 gi|91774038|ref|YP_566730.1| - 0.052 13.5 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 gi|91774038|ref|YP_566730.1| - 0.082 13.4 0.0 0.22 12.1 0.0 1.7 1 0 0 1 1 1 0 ABC transporter IPT PF01745.16 gi|91774038|ref|YP_566730.1| - 0.087 12.2 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 Isopentenyl transferase PhoH PF02562.16 gi|91774038|ref|YP_566730.1| - 0.091 12.2 0.0 0.21 11.0 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_25 PF13481.6 gi|91774038|ref|YP_566730.1| - 0.093 12.3 2.0 1.4 8.5 0.2 2.3 1 1 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|91774038|ref|YP_566730.1| - 0.1 11.6 0.0 0.16 11.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Torsin PF06309.11 gi|91774038|ref|YP_566730.1| - 0.11 12.6 0.0 0.3 11.2 0.0 1.6 2 0 0 2 2 1 0 Torsin RsgA_GTPase PF03193.16 gi|91774038|ref|YP_566730.1| - 0.16 11.9 0.0 0.36 10.7 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase Response_reg PF00072.24 gi|91774039|ref|YP_566731.1| - 2e-31 108.5 0.1 2.2e-31 108.3 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.24 gi|91774040|ref|YP_566732.1| - 3.3e-27 94.9 0.1 7.7e-27 93.7 0.1 1.7 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 gi|91774040|ref|YP_566732.1| - 7.4e-20 71.5 0.1 1.5e-19 70.5 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|91774040|ref|YP_566732.1| - 5e-09 36.4 0.0 8.3e-09 35.7 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|91774040|ref|YP_566732.1| - 7.4e-09 35.8 0.0 1.8e-08 34.5 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 gi|91774040|ref|YP_566732.1| - 1.7e-05 24.8 0.0 7.6e-05 22.7 0.0 2.0 1 1 1 2 2 2 1 PAS fold PAS_3 PF08447.12 gi|91774040|ref|YP_566732.1| - 0.00012 22.3 0.0 0.00027 21.2 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|91774040|ref|YP_566732.1| - 0.009 16.0 0.0 0.032 14.3 0.0 1.9 1 0 0 1 1 1 1 PAS domain HATPase_c_2 PF13581.6 gi|91774040|ref|YP_566732.1| - 0.011 15.7 0.0 0.023 14.7 0.0 1.5 1 1 0 1 1 1 0 Histidine kinase-like ATPase domain HisKA PF00512.25 gi|91774040|ref|YP_566732.1| - 0.056 13.5 0.3 0.18 11.8 0.0 2.0 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain Thi4 PF01946.17 gi|91774041|ref|YP_566733.1| - 5.6e-77 258.1 2.1 6.7e-77 257.9 2.1 1.1 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 gi|91774041|ref|YP_566733.1| - 1.2e-05 24.9 0.5 1.8e-05 24.3 0.5 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|91774041|ref|YP_566733.1| - 2.8e-05 23.5 2.4 0.00022 20.5 0.4 2.1 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|91774041|ref|YP_566733.1| - 5.9e-05 23.2 0.2 0.00013 22.1 0.2 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|91774041|ref|YP_566733.1| - 7.4e-05 22.0 4.6 0.00022 20.4 1.7 2.5 2 1 0 3 3 3 1 FAD binding domain FAD_binding_3 PF01494.19 gi|91774041|ref|YP_566733.1| - 0.0002 20.7 0.1 0.00026 20.3 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|91774041|ref|YP_566733.1| - 0.011 14.4 2.1 0.018 13.8 2.1 1.3 1 0 0 1 1 1 0 HI0933-like protein Amino_oxidase PF01593.24 gi|91774041|ref|YP_566733.1| - 0.061 12.6 0.0 0.2 10.9 0.0 1.8 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase DAO PF01266.24 gi|91774041|ref|YP_566733.1| - 0.082 12.5 3.2 0.64 9.5 3.2 2.4 1 1 0 1 1 1 0 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|91774041|ref|YP_566733.1| - 0.085 11.9 0.2 0.15 11.1 0.2 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein GIDA PF01134.22 gi|91774041|ref|YP_566733.1| - 0.15 11.1 1.2 0.23 10.5 1.2 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A K_oxygenase PF13434.6 gi|91774041|ref|YP_566733.1| - 0.24 10.5 0.0 0.34 10.0 0.0 1.2 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) DUF356 PF04009.12 gi|91774042|ref|YP_566734.1| - 1.5e-42 144.2 0.0 1.6e-42 144.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF356) Memo PF01875.17 gi|91774042|ref|YP_566734.1| - 0.064 12.4 0.0 4.9 6.2 0.0 2.0 1 1 1 2 2 2 0 Memo-like protein P5CR_dimer PF14748.6 gi|91774043|ref|YP_566735.1| - 1.9e-40 137.3 0.7 4.2e-40 136.2 0.7 1.6 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 gi|91774043|ref|YP_566735.1| - 9.3e-21 74.2 1.6 6.7e-20 71.5 0.6 2.4 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|91774043|ref|YP_566735.1| - 2.7e-07 30.9 1.4 9.5e-07 29.1 1.4 1.9 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|91774043|ref|YP_566735.1| - 0.0002 21.4 5.1 0.00046 20.2 5.1 1.8 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GFO_IDH_MocA PF01408.22 gi|91774043|ref|YP_566735.1| - 0.0017 19.2 0.0 0.0039 18.0 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 gi|91774043|ref|YP_566735.1| - 0.003 16.9 0.0 0.0054 16.1 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.16 gi|91774043|ref|YP_566735.1| - 0.0051 16.5 1.4 0.011 15.4 1.4 1.6 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA ThiF PF00899.21 gi|91774043|ref|YP_566735.1| - 0.0058 16.0 0.0 0.0076 15.6 0.0 1.2 1 0 0 1 1 1 1 ThiF family DapB_N PF01113.20 gi|91774043|ref|YP_566735.1| - 0.0078 16.3 0.3 0.024 14.8 0.1 1.8 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_7 PF13241.6 gi|91774043|ref|YP_566735.1| - 0.0089 16.4 0.3 0.026 15.0 0.3 1.9 1 1 0 1 1 1 1 Putative NAD(P)-binding Semialdhyde_dh PF01118.24 gi|91774043|ref|YP_566735.1| - 0.0099 16.3 0.5 0.024 15.1 0.5 1.7 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain ERF PF04404.12 gi|91774043|ref|YP_566735.1| - 0.042 13.7 0.1 0.073 12.9 0.1 1.3 1 0 0 1 1 1 0 ERF superfamily PDH PF02153.17 gi|91774043|ref|YP_566735.1| - 0.058 12.4 0.8 0.08 11.9 0.8 1.3 1 0 0 1 1 1 0 Prephenate dehydrogenase VEK-30 PF12107.8 gi|91774043|ref|YP_566735.1| - 0.36 10.8 1.1 0.77 9.8 1.1 1.6 1 0 0 1 1 1 0 Plasminogen (Pg) ligand in fibrinolytic pathway HTH_3 PF01381.22 gi|91774044|ref|YP_566736.1| - 1.7e-08 34.4 1.3 2.7e-08 33.7 1.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|91774044|ref|YP_566736.1| - 7.2e-07 29.5 0.0 1.2e-06 28.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|91774044|ref|YP_566736.1| - 5e-06 26.5 1.1 8.8e-06 25.7 1.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|91774044|ref|YP_566736.1| - 0.00012 21.8 0.4 0.00021 21.1 0.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain zf-C3HC4_3 PF13920.6 gi|91774044|ref|YP_566736.1| - 0.066 13.1 0.2 0.11 12.3 0.2 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.7 gi|91774044|ref|YP_566736.1| - 0.13 12.3 0.8 0.21 11.6 0.8 1.3 1 0 0 1 1 1 0 Double zinc ribbon AAA PF00004.29 gi|91774045|ref|YP_566737.1| - 4.5e-45 153.3 0.1 1.1e-44 152.1 0.0 1.7 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|91774045|ref|YP_566737.1| - 6.5e-16 57.9 0.3 1.4e-15 56.8 0.3 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 gi|91774045|ref|YP_566737.1| - 5.4e-09 36.2 0.0 2.2e-08 34.2 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Prot_ATP_ID_OB PF16450.5 gi|91774045|ref|YP_566737.1| - 2.5e-08 33.8 0.1 4.9e-08 32.8 0.1 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_2 PF07724.14 gi|91774045|ref|YP_566737.1| - 1.2e-06 28.7 0.0 3.5e-06 27.2 0.0 1.7 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|91774045|ref|YP_566737.1| - 1e-05 26.0 1.2 0.0022 18.4 0.1 2.7 2 1 1 3 3 3 1 AAA ATPase domain DUF815 PF05673.13 gi|91774045|ref|YP_566737.1| - 4e-05 22.9 0.0 9.5e-05 21.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) RuvB_N PF05496.12 gi|91774045|ref|YP_566737.1| - 5.3e-05 23.0 0.1 0.00018 21.3 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|91774045|ref|YP_566737.1| - 8.5e-05 22.8 0.3 0.0059 16.9 0.1 2.4 1 1 1 2 2 2 1 AAA domain AAA_28 PF13521.6 gi|91774045|ref|YP_566737.1| - 0.00035 20.9 0.1 0.00087 19.6 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|91774045|ref|YP_566737.1| - 0.0006 20.4 0.0 0.005 17.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|91774045|ref|YP_566737.1| - 0.0013 18.5 0.1 0.0046 16.7 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein TIP49 PF06068.13 gi|91774045|ref|YP_566737.1| - 0.0046 16.2 0.0 0.0076 15.5 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_33 PF13671.6 gi|91774045|ref|YP_566737.1| - 0.0072 16.5 0.0 0.014 15.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|91774045|ref|YP_566737.1| - 0.0086 16.5 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 RNA helicase AAA_29 PF13555.6 gi|91774045|ref|YP_566737.1| - 0.0098 15.6 0.1 4.9 7.0 0.0 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain Mg_chelatase PF01078.21 gi|91774045|ref|YP_566737.1| - 0.011 15.2 0.1 0.02 14.3 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|91774045|ref|YP_566737.1| - 0.011 15.5 0.0 0.19 11.4 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_14 PF13173.6 gi|91774045|ref|YP_566737.1| - 0.012 15.7 0.1 0.053 13.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|91774045|ref|YP_566737.1| - 0.024 14.2 0.0 0.056 13.0 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region ATPase PF06745.13 gi|91774045|ref|YP_566737.1| - 0.024 14.0 3.1 0.27 10.6 0.0 2.9 2 1 1 3 3 3 0 KaiC AAA_3 PF07726.11 gi|91774045|ref|YP_566737.1| - 0.026 14.4 0.0 0.061 13.2 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|91774045|ref|YP_566737.1| - 0.05 13.6 0.0 0.2 11.7 0.0 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 gi|91774045|ref|YP_566737.1| - 0.06 12.8 0.1 0.12 11.8 0.1 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA_24 PF13479.6 gi|91774045|ref|YP_566737.1| - 0.087 12.5 0.0 0.19 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|91774045|ref|YP_566737.1| - 0.11 12.2 0.4 0.3 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_11 PF13086.6 gi|91774045|ref|YP_566737.1| - 0.14 11.9 0.8 1.1 9.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain Parvo_NS1 PF01057.17 gi|91774045|ref|YP_566737.1| - 0.18 10.9 0.0 0.33 10.0 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 gi|91774045|ref|YP_566737.1| - 0.3 10.6 2.4 0.67 9.5 0.2 2.4 2 1 1 3 3 3 0 AAA domain HALZ PF02183.18 gi|91774045|ref|YP_566737.1| - 0.58 10.4 7.8 6.6 7.0 7.8 2.3 1 1 0 1 1 1 0 Homeobox associated leucine zipper DivIC PF04977.15 gi|91774045|ref|YP_566737.1| - 0.72 9.7 4.2 2.6 7.9 1.7 2.4 1 1 1 2 2 2 0 Septum formation initiator bZIP_2 PF07716.15 gi|91774045|ref|YP_566737.1| - 2.9 8.0 9.2 0.82 9.8 1.9 2.4 1 1 1 2 2 2 0 Basic region leucine zipper PGM_PMM_I PF02878.16 gi|91774046|ref|YP_566738.1| - 2.1e-40 137.6 0.6 5e-40 136.4 0.6 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|91774046|ref|YP_566738.1| - 1.1e-27 96.6 0.0 2.1e-27 95.7 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|91774046|ref|YP_566738.1| - 1.1e-25 90.1 0.1 2.2e-25 89.1 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|91774046|ref|YP_566738.1| - 4.4e-12 46.0 0.0 1.9e-11 44.0 0.0 2.1 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Methyltransf_29 PF03141.16 gi|91774046|ref|YP_566738.1| - 0.018 13.6 0.0 0.028 13.0 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_32 PF13679.6 gi|91774046|ref|YP_566738.1| - 0.057 13.4 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Ribonuc_red_lgC PF02867.15 gi|91774046|ref|YP_566738.1| - 0.064 11.8 0.0 0.091 11.3 0.0 1.2 1 0 0 1 1 1 0 Ribonucleotide reductase, barrel domain Methyltransf_25 PF13649.6 gi|91774046|ref|YP_566738.1| - 0.14 12.9 0.4 8.4 7.2 0.1 3.5 4 1 0 4 4 4 0 Methyltransferase domain GidB PF02527.15 gi|91774046|ref|YP_566738.1| - 0.18 11.1 0.0 0.35 10.2 0.0 1.4 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G SRP19 PF01922.17 gi|91774047|ref|YP_566739.1| - 2.6e-20 73.2 0.1 3.2e-20 72.9 0.1 1.1 1 0 0 1 1 1 1 SRP19 protein Sec61_beta PF03911.16 gi|91774048|ref|YP_566740.1| - 6.3e-11 42.1 0.2 6.3e-11 42.1 0.2 1.7 2 1 0 2 2 2 1 Sec61beta family IF-2B PF01008.17 gi|91774049|ref|YP_566741.1| - 5.4e-87 291.6 0.2 6.3e-87 291.4 0.2 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family HATPase_c PF02518.26 gi|91774050|ref|YP_566742.1| - 8.7e-29 100.3 1.6 1.8e-28 99.2 0.2 2.3 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91774050|ref|YP_566742.1| - 1.4e-16 60.2 0.1 5.3e-16 58.4 0.0 2.0 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain SBP_bac_3 PF00497.20 gi|91774050|ref|YP_566742.1| - 3.8e-16 59.2 0.9 6.4e-16 58.5 0.3 1.7 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 PAS_9 PF13426.7 gi|91774050|ref|YP_566742.1| - 3.2e-10 40.2 0.7 1.3e-09 38.2 0.2 2.3 2 0 0 2 2 2 1 PAS domain PAS_8 PF13188.7 gi|91774050|ref|YP_566742.1| - 6.6e-06 26.0 0.0 1.3e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 PAS domain HATPase_c_5 PF14501.6 gi|91774050|ref|YP_566742.1| - 1.5e-05 24.8 0.2 4.6e-05 23.3 0.2 1.9 1 0 0 1 1 1 1 GHKL domain PAS_4 PF08448.10 gi|91774050|ref|YP_566742.1| - 9.4e-05 22.6 0.0 0.00026 21.2 0.0 1.7 2 0 0 2 2 2 1 PAS fold PAS_3 PF08447.12 gi|91774050|ref|YP_566742.1| - 0.00035 20.8 0.0 0.00083 19.6 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS PF00989.25 gi|91774050|ref|YP_566742.1| - 0.00097 19.1 0.0 0.0021 18.0 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_7 PF12860.7 gi|91774050|ref|YP_566742.1| - 0.0051 17.0 0.0 0.026 14.7 0.0 2.3 2 1 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 gi|91774050|ref|YP_566742.1| - 0.077 13.0 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain SBP_bac_3 PF00497.20 gi|91774051|ref|YP_566743.1| - 3.8e-32 111.5 0.3 5.9e-31 107.6 0.0 2.1 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 HATPase_c PF02518.26 gi|91774051|ref|YP_566743.1| - 3.3e-28 98.4 2.3 1.4e-26 93.2 0.3 2.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91774051|ref|YP_566743.1| - 2e-17 63.0 0.1 6e-17 61.5 0.1 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 gi|91774051|ref|YP_566743.1| - 2.1e-10 40.8 2.0 3.1e-10 40.2 0.5 2.2 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 gi|91774051|ref|YP_566743.1| - 1.8e-07 31.1 0.1 4.6e-07 29.8 0.1 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_5 PF14501.6 gi|91774051|ref|YP_566743.1| - 4.6e-07 29.7 1.6 4.6e-07 29.7 1.6 3.6 2 1 1 3 3 3 1 GHKL domain PAS_8 PF13188.7 gi|91774051|ref|YP_566743.1| - 6.7e-07 29.2 0.0 1.6e-06 28.0 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|91774051|ref|YP_566743.1| - 2.6e-05 24.4 0.0 5.6e-05 23.4 0.0 1.6 1 0 0 1 1 1 1 PAS fold NMT1 PF09084.11 gi|91774051|ref|YP_566743.1| - 0.0054 16.7 0.0 0.033 14.1 0.0 2.1 2 0 0 2 2 2 1 NMT1/THI5 like PAS_3 PF08447.12 gi|91774051|ref|YP_566743.1| - 0.0091 16.3 0.0 0.031 14.6 0.0 2.0 1 0 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.6 gi|91774051|ref|YP_566743.1| - 0.011 15.5 0.0 0.029 14.2 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|91774051|ref|YP_566743.1| - 0.055 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF4083 PF13314.6 gi|91774051|ref|YP_566743.1| - 0.21 11.6 2.7 0.29 11.1 0.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) HD PF01966.22 gi|91774052|ref|YP_566744.1| - 1.5e-12 47.8 0.0 2.9e-12 46.9 0.0 1.5 1 0 0 1 1 1 1 HD domain HDOD PF08668.12 gi|91774052|ref|YP_566744.1| - 0.0084 15.6 0.0 0.017 14.6 0.0 1.4 1 0 0 1 1 1 1 HDOD domain GCD14 PF08704.10 gi|91774053|ref|YP_566745.1| - 4.3e-14 52.8 0.0 4.5e-12 46.2 0.0 2.1 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 gi|91774053|ref|YP_566745.1| - 2.9e-10 40.1 0.0 4.4e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91774053|ref|YP_566745.1| - 1.2e-08 35.5 0.0 3.6e-08 34.0 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 gi|91774053|ref|YP_566745.1| - 4.7e-08 33.0 0.0 7e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.12 gi|91774053|ref|YP_566745.1| - 2.7e-07 31.2 0.0 5.8e-07 30.1 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|91774053|ref|YP_566745.1| - 3.3e-07 30.0 0.0 4.9e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.20 gi|91774053|ref|YP_566745.1| - 1.3e-06 27.7 0.0 1.9e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_18 PF12847.7 gi|91774053|ref|YP_566745.1| - 2.9e-06 27.3 0.0 6e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|91774053|ref|YP_566745.1| - 0.0002 20.9 0.1 0.00036 20.1 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|91774053|ref|YP_566745.1| - 0.0044 16.9 0.0 0.0081 16.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|91774053|ref|YP_566745.1| - 0.0096 15.9 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|91774053|ref|YP_566745.1| - 0.011 15.4 0.0 0.017 14.7 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_12 PF08242.12 gi|91774053|ref|YP_566745.1| - 0.013 16.2 0.0 0.024 15.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 gi|91774053|ref|YP_566745.1| - 0.014 14.9 0.0 0.054 13.0 0.0 1.8 1 1 1 2 2 2 0 Putative methyltransferase CMAS PF02353.20 gi|91774053|ref|YP_566745.1| - 0.016 14.5 0.0 0.032 13.5 0.0 1.4 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase Rad51 PF08423.11 gi|91774054|ref|YP_566746.1| - 8.3e-36 123.5 0.2 1e-35 123.2 0.2 1.0 1 0 0 1 1 1 1 Rad51 ATPase PF06745.13 gi|91774054|ref|YP_566746.1| - 1e-14 54.5 3.9 6.3e-14 51.9 3.9 1.9 1 1 0 1 1 1 1 KaiC RecA PF00154.21 gi|91774054|ref|YP_566746.1| - 4.5e-13 49.3 0.1 5.4e-13 49.0 0.1 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_24 PF13479.6 gi|91774054|ref|YP_566746.1| - 5.5e-08 32.8 0.0 8.1e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Zot PF05707.12 gi|91774054|ref|YP_566746.1| - 1.8e-07 31.0 0.1 2.3e-07 30.7 0.1 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_25 PF13481.6 gi|91774054|ref|YP_566746.1| - 1e-06 28.5 0.0 2e-06 27.5 0.0 1.5 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|91774054|ref|YP_566746.1| - 2.7e-05 23.9 0.0 4.2e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain TrwB_AAD_bind PF10412.9 gi|91774054|ref|YP_566746.1| - 3e-05 23.1 0.0 5.4e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain DUF2075 PF09848.9 gi|91774054|ref|YP_566746.1| - 7.1e-05 22.2 0.1 8.6e-05 21.9 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) CobU PF02283.16 gi|91774054|ref|YP_566746.1| - 0.0009 18.8 0.1 0.0022 17.6 0.1 1.6 1 1 0 1 1 1 1 Cobinamide kinase / cobinamide phosphate guanyltransferase PhoH PF02562.16 gi|91774054|ref|YP_566746.1| - 0.0011 18.4 0.1 0.0026 17.2 0.1 1.5 1 0 0 1 1 1 1 PhoH-like protein ABC_tran PF00005.27 gi|91774054|ref|YP_566746.1| - 0.0049 17.4 0.1 0.0074 16.8 0.1 1.5 1 1 0 1 1 1 1 ABC transporter ArsA_ATPase PF02374.15 gi|91774054|ref|YP_566746.1| - 0.0049 16.1 0.0 0.0079 15.4 0.0 1.3 1 0 0 1 1 1 1 Anion-transporting ATPase DnaB_C PF03796.15 gi|91774054|ref|YP_566746.1| - 0.0058 16.0 0.9 0.36 10.1 0.0 2.2 1 1 1 2 2 2 1 DnaB-like helicase C terminal domain AAA PF00004.29 gi|91774054|ref|YP_566746.1| - 0.0062 17.0 0.3 0.014 15.8 0.3 1.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 gi|91774054|ref|YP_566746.1| - 0.0089 15.8 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein CbiA PF01656.23 gi|91774054|ref|YP_566746.1| - 0.01 15.9 0.0 0.016 15.3 0.0 1.3 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ATPase_2 PF01637.18 gi|91774054|ref|YP_566746.1| - 0.011 15.6 0.4 0.018 14.9 0.4 1.4 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_18 PF13238.6 gi|91774054|ref|YP_566746.1| - 0.013 16.0 0.0 0.018 15.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|91774054|ref|YP_566746.1| - 0.015 15.4 0.3 0.036 14.2 0.3 1.7 1 1 0 1 1 1 0 Helicase HerA, central domain RVT_1 PF00078.27 gi|91774054|ref|YP_566746.1| - 0.015 14.8 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) DEAD PF00270.29 gi|91774054|ref|YP_566746.1| - 0.018 14.8 0.5 1.8 8.3 0.1 2.4 1 1 1 2 2 2 0 DEAD/DEAH box helicase AAA_31 PF13614.6 gi|91774054|ref|YP_566746.1| - 0.044 13.7 0.1 0.056 13.4 0.1 1.3 1 0 0 1 1 1 0 AAA domain Pox_A32 PF04665.12 gi|91774054|ref|YP_566746.1| - 0.054 12.9 0.1 1.9 7.9 0.0 2.1 1 1 0 2 2 2 0 Poxvirus A32 protein CLP1_P PF16575.5 gi|91774054|ref|YP_566746.1| - 0.061 13.1 0.0 0.15 11.8 0.0 1.6 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_22 PF13401.6 gi|91774054|ref|YP_566746.1| - 0.064 13.5 0.1 0.1 12.9 0.1 1.4 1 1 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|91774054|ref|YP_566746.1| - 0.068 13.2 2.4 1.1 9.2 2.3 2.6 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_30 PF13604.6 gi|91774054|ref|YP_566746.1| - 0.08 12.7 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain Glutaredoxin PF00462.24 gi|91774055|ref|YP_566747.1| - 1.9e-08 34.4 0.1 2.5e-08 34.0 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 gi|91774055|ref|YP_566747.1| - 0.00098 19.5 0.1 0.0015 18.9 0.1 1.4 1 1 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_2 PF13098.6 gi|91774055|ref|YP_566747.1| - 0.053 14.0 0.2 0.08 13.4 0.2 1.2 1 1 0 1 1 1 0 Thioredoxin-like domain NRDD PF13597.6 gi|91774056|ref|YP_566748.1| - 4.9e-153 510.9 0.0 5.7e-153 510.7 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase RapH_N PF18801.1 gi|91774056|ref|YP_566748.1| - 0.02 15.0 0.1 0.49 10.5 0.2 2.6 2 0 0 2 2 2 0 response regulator aspartate phosphatase H, N terminal DUF2953 PF11167.8 gi|91774056|ref|YP_566748.1| - 0.11 12.6 0.2 0.29 11.2 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2953) Radical_SAM PF04055.21 gi|91774057|ref|YP_566749.1| - 2.8e-19 70.1 0.0 4.4e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|91774057|ref|YP_566749.1| - 3.8e-11 43.4 0.0 7e-11 42.5 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|91774057|ref|YP_566749.1| - 1.1e-07 32.0 0.0 2.2e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF2717 PF10911.8 gi|91774057|ref|YP_566749.1| - 0.0084 15.8 0.0 0.02 14.6 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2717) DUF4349 PF14257.6 gi|91774058|ref|YP_566750.1| - 3e-65 219.7 0.4 3.7e-65 219.4 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4349) Cauli_AT PF03233.13 gi|91774058|ref|YP_566750.1| - 0.0069 16.3 0.8 0.39 10.6 0.4 2.2 2 0 0 2 2 2 1 Aphid transmission protein PI3K_P85_iSH2 PF16454.5 gi|91774058|ref|YP_566750.1| - 0.024 14.2 0.1 0.035 13.7 0.1 1.2 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Snapin_Pallidin PF14712.6 gi|91774058|ref|YP_566750.1| - 0.055 13.9 0.3 0.11 12.9 0.3 1.5 1 0 0 1 1 1 0 Snapin/Pallidin Val_tRNA-synt_C PF10458.9 gi|91774058|ref|YP_566750.1| - 0.087 13.1 0.7 0.75 10.1 0.0 2.4 1 1 1 2 2 2 0 Valyl tRNA synthetase tRNA binding arm NPV_P10 PF05531.12 gi|91774058|ref|YP_566750.1| - 0.3 11.6 1.8 2.6 8.6 0.9 2.7 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein SKG6 PF08693.10 gi|91774058|ref|YP_566750.1| - 6.9 6.2 10.4 14 5.2 10.4 1.4 1 0 0 1 1 1 0 Transmembrane alpha-helix domain AIRS PF00586.24 gi|91774059|ref|YP_566751.1| - 1.4e-20 73.8 1.8 2.7e-20 72.8 1.8 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|91774059|ref|YP_566751.1| - 2e-07 31.2 0.0 4.1e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain S-layer PF07752.11 gi|91774060|ref|YP_566752.1| - 2.7e-192 636.2 37.4 1.2e-97 326.0 10.8 3.0 3 0 0 3 3 3 2 S-layer protein PEGA PF08308.11 gi|91774060|ref|YP_566752.1| - 0.00048 20.0 10.5 0.003 17.4 0.0 5.3 5 0 0 5 5 5 1 PEGA domain DUF4198 PF10670.9 gi|91774060|ref|YP_566752.1| - 0.0015 18.9 4.7 1 9.7 0.1 4.4 4 0 0 4 4 4 2 Domain of unknown function (DUF4198) tRNA-synt_1c_C PF03950.18 gi|91774060|ref|YP_566752.1| - 0.003 17.5 6.2 0.77 9.6 0.1 3.8 3 1 0 4 4 4 2 tRNA synthetases class I (E and Q), anti-codon binding domain PrcB_C PF14343.6 gi|91774060|ref|YP_566752.1| - 0.065 13.4 2.7 1.7 8.8 0.2 3.1 2 0 0 2 2 2 0 PrcB C-terminal Cupredoxin_1 PF13473.6 gi|91774060|ref|YP_566752.1| - 6.2 7.0 6.2 25 5.0 0.0 4.6 6 1 0 6 6 6 0 Cupredoxin-like domain HTH_3 PF01381.22 gi|91774061|ref|YP_566753.1| - 6.8e-06 26.1 0.2 2e-05 24.6 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix PrpR_N PF06506.11 gi|91774061|ref|YP_566753.1| - 0.019 14.5 0.6 0.029 14.0 0.6 1.3 1 0 0 1 1 1 0 Propionate catabolism activator HTH_17 PF12728.7 gi|91774061|ref|YP_566753.1| - 0.12 12.6 0.0 0.28 11.4 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain NMT1_2 PF13379.6 gi|91774062|ref|YP_566754.1| - 7.9e-34 117.5 0.0 1.1e-33 117.0 0.0 1.2 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 gi|91774062|ref|YP_566754.1| - 4.1e-14 53.0 0.0 5.7e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|91774062|ref|YP_566754.1| - 3.7e-05 23.5 0.0 4.4e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1_3 PF16868.5 gi|91774062|ref|YP_566754.1| - 0.0067 15.9 0.0 0.016 14.6 0.0 1.7 1 1 1 2 2 2 1 NMT1-like family SBP_bac_3 PF00497.20 gi|91774062|ref|YP_566754.1| - 0.0099 15.3 0.0 0.027 13.9 0.0 1.7 1 1 1 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 Ppnp PF06865.11 gi|91774062|ref|YP_566754.1| - 0.029 14.8 0.0 0.055 13.9 0.0 1.4 1 0 0 1 1 1 0 Pyrimidine/purine nucleoside phosphorylase BPD_transp_1 PF00528.22 gi|91774063|ref|YP_566755.1| - 1.5e-20 73.7 12.1 1.5e-20 73.7 12.1 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|91774064|ref|YP_566756.1| - 3.4e-33 115.1 0.0 5.1e-33 114.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA PF00004.29 gi|91774064|ref|YP_566756.1| - 6e-09 36.4 1.4 1.2e-07 32.2 0.2 2.9 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.6 gi|91774064|ref|YP_566756.1| - 9.6e-09 35.5 0.0 0.00029 20.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ATPase_2 PF01637.18 gi|91774064|ref|YP_566756.1| - 2e-05 24.6 0.0 0.0099 15.8 0.0 2.2 2 0 0 2 2 2 2 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|91774064|ref|YP_566756.1| - 4.3e-05 23.8 0.1 0.00024 21.4 0.1 2.2 2 1 0 2 2 1 1 AAA domain RsgA_GTPase PF03193.16 gi|91774064|ref|YP_566756.1| - 9.2e-05 22.4 0.1 0.00021 21.2 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 gi|91774064|ref|YP_566756.1| - 0.0003 21.2 0.0 0.0047 17.3 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_28 PF13521.6 gi|91774064|ref|YP_566756.1| - 0.00035 20.9 0.1 0.0042 17.3 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|91774064|ref|YP_566756.1| - 0.00036 20.7 0.0 0.00096 19.3 0.0 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|91774064|ref|YP_566756.1| - 0.00047 19.7 0.0 0.34 10.3 0.0 2.2 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|91774064|ref|YP_566756.1| - 0.00049 19.9 0.0 0.0013 18.5 0.0 1.5 1 1 0 2 2 2 1 AAA ATPase domain Rad17 PF03215.15 gi|91774064|ref|YP_566756.1| - 0.0011 18.9 0.0 0.004 17.1 0.0 1.9 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_23 PF13476.6 gi|91774064|ref|YP_566756.1| - 0.0025 18.4 0.1 0.0062 17.1 0.1 1.7 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 gi|91774064|ref|YP_566756.1| - 0.0026 17.5 0.0 0.027 14.2 0.0 2.2 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 gi|91774064|ref|YP_566756.1| - 0.0045 16.9 0.0 0.012 15.5 0.0 1.7 1 0 0 1 1 1 1 NACHT domain AAA_29 PF13555.6 gi|91774064|ref|YP_566756.1| - 0.0058 16.3 0.0 0.012 15.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 gi|91774064|ref|YP_566756.1| - 0.0079 15.0 0.2 0.36 9.6 0.0 2.8 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_5 PF07728.14 gi|91774064|ref|YP_566756.1| - 0.013 15.5 0.0 0.047 13.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) PhoH PF02562.16 gi|91774064|ref|YP_566756.1| - 0.022 14.2 0.0 0.057 12.9 0.0 1.6 2 0 0 2 2 2 0 PhoH-like protein NTPase_1 PF03266.15 gi|91774064|ref|YP_566756.1| - 0.034 14.1 0.1 3.5 7.5 0.0 2.3 2 0 0 2 2 2 0 NTPase RNA_helicase PF00910.22 gi|91774064|ref|YP_566756.1| - 0.038 14.4 0.1 0.21 12.0 0.0 2.3 3 0 0 3 3 2 0 RNA helicase NB-ARC PF00931.22 gi|91774064|ref|YP_566756.1| - 0.039 13.2 0.1 0.095 11.9 0.0 1.6 2 0 0 2 2 2 0 NB-ARC domain AAA_14 PF13173.6 gi|91774064|ref|YP_566756.1| - 0.043 13.9 0.1 0.38 10.8 0.0 2.4 2 1 1 3 3 3 0 AAA domain IstB_IS21 PF01695.17 gi|91774064|ref|YP_566756.1| - 0.059 13.1 0.0 0.16 11.7 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein MMR_HSR1 PF01926.23 gi|91774064|ref|YP_566756.1| - 0.066 13.3 0.1 0.17 12.0 0.1 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 gi|91774064|ref|YP_566756.1| - 0.073 12.6 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region APS_kinase PF01583.20 gi|91774064|ref|YP_566756.1| - 0.077 12.9 0.0 3.4 7.5 0.0 2.2 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_30 PF13604.6 gi|91774064|ref|YP_566756.1| - 0.088 12.5 0.0 0.35 10.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|91774064|ref|YP_566756.1| - 0.094 12.4 0.1 0.23 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 gi|91774064|ref|YP_566756.1| - 0.13 12.2 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Bactofilin PF04519.13 gi|91774065|ref|YP_566757.1| - 3e-07 30.7 0.3 7.4e-07 29.4 0.2 1.7 1 1 0 1 1 1 1 Polymer-forming cytoskeletal SCP2 PF02036.17 gi|91774065|ref|YP_566757.1| - 0.056 13.9 0.0 9.4 6.8 0.0 2.4 2 0 0 2 2 2 0 SCP-2 sterol transfer family DUF772 PF05598.11 gi|91774066|ref|YP_566758.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91774066|ref|YP_566758.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91774066|ref|YP_566758.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91774066|ref|YP_566758.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91774066|ref|YP_566758.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease Prenyltrans PF00432.21 gi|91774067|ref|YP_566759.1| - 1.8e-09 37.2 0.8 0.025 14.3 0.0 3.8 3 0 0 3 3 3 3 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_C PF13243.6 gi|91774067|ref|YP_566759.1| - 2.5e-08 33.4 4.2 0.006 15.7 0.7 3.4 1 1 1 2 2 2 2 Squalene-hopene cyclase C-terminal domain SQHop_cyclase_N PF13249.6 gi|91774067|ref|YP_566759.1| - 1.1e-06 27.9 0.5 0.24 10.4 0.0 3.0 2 1 1 3 3 3 3 Squalene-hopene cyclase N-terminal domain TED_complement PF07678.14 gi|91774067|ref|YP_566759.1| - 1.3e-05 24.4 2.4 0.12 11.4 0.2 3.2 2 1 1 3 3 3 3 A-macroglobulin TED domain TPK_B1_binding PF04265.14 gi|91774067|ref|YP_566759.1| - 0.0057 16.3 0.1 0.19 11.5 0.1 2.4 2 0 0 2 2 2 1 Thiamin pyrophosphokinase, vitamin B1 binding domain Cobalamin_bind PF01122.19 gi|91774067|ref|YP_566759.1| - 0.067 12.1 0.0 3.8 6.3 0.0 2.1 2 0 0 2 2 2 0 Eukaryotic cobalamin-binding protein NRDD PF13597.6 gi|91774068|ref|YP_566760.1| - 1.4e-149 499.5 0.0 1.6e-149 499.3 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase DUF3029 PF11230.8 gi|91774068|ref|YP_566760.1| - 0.0048 15.3 0.1 0.015 13.7 0.1 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF3029) FTA4 PF13093.6 gi|91774068|ref|YP_566760.1| - 0.01 15.7 0.0 0.017 15.1 0.0 1.3 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 PyrBI_leader PF08052.11 gi|91774068|ref|YP_566760.1| - 0.17 11.8 0.4 0.55 10.2 0.1 2.0 2 0 0 2 2 2 0 PyrBI operon leader peptide ParA PF10609.9 gi|91774069|ref|YP_566761.1| - 1.4e-99 332.6 1.3 1.6e-99 332.4 1.3 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|91774069|ref|YP_566761.1| - 3.9e-15 56.0 0.0 1.4e-14 54.2 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|91774069|ref|YP_566761.1| - 2.2e-10 40.8 0.4 2e-09 37.6 0.4 2.1 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 gi|91774069|ref|YP_566761.1| - 9.3e-10 38.2 0.2 7.7e-09 35.1 0.1 2.1 1 1 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 gi|91774069|ref|YP_566761.1| - 1.9e-07 30.7 0.0 2.5e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.18 gi|91774069|ref|YP_566761.1| - 1.1e-05 25.1 0.3 0.00024 20.7 0.1 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_26 PF13500.6 gi|91774069|ref|YP_566761.1| - 0.00027 20.8 0.7 0.036 13.9 0.1 2.3 2 1 0 2 2 2 1 AAA domain APS_kinase PF01583.20 gi|91774069|ref|YP_566761.1| - 0.0014 18.5 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_25 PF13481.6 gi|91774069|ref|YP_566761.1| - 0.0014 18.2 0.0 0.0023 17.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain CBP_BcsQ PF06564.12 gi|91774069|ref|YP_566761.1| - 0.0031 17.0 0.1 0.022 14.2 0.1 2.0 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ CLP1_P PF16575.5 gi|91774069|ref|YP_566761.1| - 0.0032 17.3 0.0 0.01 15.7 0.0 1.8 3 0 0 3 3 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop SRP54 PF00448.22 gi|91774069|ref|YP_566761.1| - 0.004 16.8 0.1 0.0078 15.9 0.1 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|91774069|ref|YP_566761.1| - 0.0055 15.7 0.2 0.012 14.6 0.1 1.5 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB VirC1 PF07015.11 gi|91774069|ref|YP_566761.1| - 0.0078 15.5 0.0 0.012 14.9 0.0 1.2 1 0 0 1 1 1 1 VirC1 protein AAA_30 PF13604.6 gi|91774069|ref|YP_566761.1| - 0.009 15.7 0.0 0.016 14.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|91774069|ref|YP_566761.1| - 0.013 15.4 1.1 0.018 15.0 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase NTPase_1 PF03266.15 gi|91774069|ref|YP_566761.1| - 0.021 14.8 0.1 0.12 12.3 0.0 2.0 2 0 0 2 2 2 0 NTPase Zeta_toxin PF06414.12 gi|91774069|ref|YP_566761.1| - 0.021 14.1 0.0 0.035 13.4 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.6 gi|91774069|ref|YP_566761.1| - 0.032 14.4 0.0 0.049 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.10 gi|91774069|ref|YP_566761.1| - 0.038 13.4 0.0 0.053 13.0 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 NB-ARC PF00931.22 gi|91774069|ref|YP_566761.1| - 0.05 12.8 0.1 0.082 12.1 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain MobB PF03205.14 gi|91774069|ref|YP_566761.1| - 0.066 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B DUF4916 PF16262.5 gi|91774069|ref|YP_566761.1| - 0.14 11.6 0.0 0.3 10.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) RNA_helicase PF00910.22 gi|91774069|ref|YP_566761.1| - 0.14 12.5 0.0 0.26 11.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 gi|91774069|ref|YP_566761.1| - 0.18 12.3 0.0 0.32 11.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF134 PF02001.16 gi|91774070|ref|YP_566762.1| - 1.2e-29 102.7 0.0 1.4e-29 102.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4_2 PF08281.12 gi|91774070|ref|YP_566762.1| - 3.6e-06 26.5 0.2 5.2e-06 26.0 0.2 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|91774070|ref|YP_566762.1| - 6.2e-05 23.0 0.6 7.6e-05 22.7 0.6 1.1 1 0 0 1 1 1 1 ECF sigma factor HTH_10 PF04967.12 gi|91774070|ref|YP_566762.1| - 0.00048 19.9 0.1 0.0016 18.2 0.0 1.9 2 0 0 2 2 2 1 HTH DNA binding domain HTH_23 PF13384.6 gi|91774070|ref|YP_566762.1| - 0.00073 19.3 0.1 0.0011 18.7 0.1 1.3 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|91774070|ref|YP_566762.1| - 0.0025 17.3 0.1 0.0039 16.7 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|91774070|ref|YP_566762.1| - 0.017 15.2 0.4 0.017 15.2 0.4 1.7 2 0 0 2 2 2 0 Helix-turn-helix HTH_1 PF00126.27 gi|91774070|ref|YP_566762.1| - 0.024 14.6 0.4 0.059 13.3 0.5 1.6 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_11 PF08279.12 gi|91774070|ref|YP_566762.1| - 0.11 12.4 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 HTH domain AAA_16 PF13191.6 gi|91774071|ref|YP_566763.1| - 9.3e-10 39.1 0.0 5.9e-07 30.0 0.0 2.9 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|91774071|ref|YP_566763.1| - 8e-08 32.8 0.0 1.7e-07 31.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|91774071|ref|YP_566763.1| - 1.7e-06 27.7 0.1 0.00064 19.3 0.0 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_11 PF13086.6 gi|91774071|ref|YP_566763.1| - 7.3e-06 26.0 0.0 1.3e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|91774071|ref|YP_566763.1| - 8.5e-06 26.1 0.0 2e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain Cdc6_C PF09079.11 gi|91774071|ref|YP_566763.1| - 5.7e-05 23.0 0.0 0.00016 21.5 0.0 1.9 1 1 0 1 1 1 1 CDC6, C terminal winged helix domain NACHT PF05729.12 gi|91774071|ref|YP_566763.1| - 6.4e-05 22.9 0.0 0.00013 22.0 0.0 1.4 1 0 0 1 1 1 1 NACHT domain NB-ARC PF00931.22 gi|91774071|ref|YP_566763.1| - 0.00019 20.7 0.0 0.00036 19.8 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain ATPase_2 PF01637.18 gi|91774071|ref|YP_566763.1| - 0.00041 20.3 0.1 0.0014 18.6 0.1 1.8 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea T2SSE PF00437.20 gi|91774071|ref|YP_566763.1| - 0.00047 19.3 0.0 0.00075 18.6 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_14 PF13173.6 gi|91774071|ref|YP_566763.1| - 0.0011 18.9 0.6 0.0046 17.0 0.1 2.2 2 1 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|91774071|ref|YP_566763.1| - 0.0016 18.8 0.0 0.0051 17.2 0.0 1.9 2 0 0 2 2 1 1 AAA domain Sigma54_activat PF00158.26 gi|91774071|ref|YP_566763.1| - 0.0016 18.2 0.0 0.0031 17.2 0.0 1.4 2 0 0 2 2 1 1 Sigma-54 interaction domain AAA_24 PF13479.6 gi|91774071|ref|YP_566763.1| - 0.0016 18.2 0.0 0.013 15.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|91774071|ref|YP_566763.1| - 0.002 18.0 0.1 0.005 16.8 0.1 1.6 1 0 0 1 1 1 1 NTPase DUF815 PF05673.13 gi|91774071|ref|YP_566763.1| - 0.01 15.0 0.0 0.13 11.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF815) Zeta_toxin PF06414.12 gi|91774071|ref|YP_566763.1| - 0.011 15.1 0.0 0.025 13.9 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin DUF2075 PF09848.9 gi|91774071|ref|YP_566763.1| - 0.018 14.3 0.0 0.027 13.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 gi|91774071|ref|YP_566763.1| - 0.019 14.7 0.0 0.053 13.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain KAP_NTPase PF07693.14 gi|91774071|ref|YP_566763.1| - 0.021 14.1 0.0 0.047 12.9 0.0 1.6 1 1 0 1 1 1 0 KAP family P-loop domain AAA_35 PF14516.6 gi|91774071|ref|YP_566763.1| - 0.021 13.7 0.1 1 8.1 0.0 2.3 2 0 0 2 2 2 0 AAA-like domain AAA_6 PF12774.7 gi|91774071|ref|YP_566763.1| - 0.023 13.7 0.0 0.037 13.0 0.0 1.2 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region TIP49_C PF17856.1 gi|91774071|ref|YP_566763.1| - 0.024 14.8 0.0 0.082 13.1 0.0 1.9 1 0 0 1 1 1 0 TIP49 AAA-lid domain ResIII PF04851.15 gi|91774071|ref|YP_566763.1| - 0.026 14.5 0.0 0.063 13.3 0.0 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit ATPase PF06745.13 gi|91774071|ref|YP_566763.1| - 0.031 13.6 0.1 0.19 11.1 0.1 2.1 1 1 1 2 2 2 0 KaiC IstB_IS21 PF01695.17 gi|91774071|ref|YP_566763.1| - 0.037 13.7 0.1 8.6 6.1 0.0 3.0 3 0 0 3 3 3 0 IstB-like ATP binding protein RecA PF00154.21 gi|91774071|ref|YP_566763.1| - 0.049 13.1 0.0 0.077 12.4 0.0 1.3 1 0 0 1 1 1 0 recA bacterial DNA recombination protein TniB PF05621.11 gi|91774071|ref|YP_566763.1| - 0.051 13.0 0.0 0.11 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein Rad17 PF03215.15 gi|91774071|ref|YP_566763.1| - 0.067 13.1 0.7 0.53 10.2 0.1 2.5 2 1 1 3 3 3 0 Rad17 P-loop domain RuvB_N PF05496.12 gi|91774071|ref|YP_566763.1| - 0.069 12.9 0.3 0.44 10.3 0.0 2.1 1 1 1 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain CbiA PF01656.23 gi|91774071|ref|YP_566763.1| - 0.07 13.2 0.0 0.095 12.8 0.0 1.3 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain SRP54 PF00448.22 gi|91774071|ref|YP_566763.1| - 0.09 12.4 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_5 PF07728.14 gi|91774071|ref|YP_566763.1| - 0.11 12.5 0.1 0.37 10.8 0.0 1.9 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_32 PF13654.6 gi|91774071|ref|YP_566763.1| - 0.11 11.2 0.0 0.71 8.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|91774071|ref|YP_566763.1| - 0.13 12.8 0.1 0.32 11.5 0.1 1.8 1 1 0 1 1 1 0 AAA domain TOBE PF03459.17 gi|91774072|ref|YP_566764.1| - 2.2e-11 43.9 0.2 1.2e-10 41.5 0.2 2.1 2 0 0 2 2 2 1 TOBE domain HTH_1 PF00126.27 gi|91774072|ref|YP_566764.1| - 6e-11 42.1 0.0 1.4e-10 40.9 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family Exo_endo_phos PF03372.23 gi|91774073|ref|YP_566765.1| - 3.4e-21 75.8 0.0 4.1e-21 75.6 0.0 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|91774073|ref|YP_566765.1| - 2e-05 24.4 0.0 5.1e-05 23.1 0.0 1.7 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase Cpn60_TCP1 PF00118.24 gi|91774074|ref|YP_566766.1| - 1.1e-180 601.5 24.0 1.2e-180 601.3 24.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family TrwC PF08751.11 gi|91774074|ref|YP_566766.1| - 0.0082 15.7 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 1 TrwC relaxase DUF5350 PF17299.2 gi|91774075|ref|YP_566767.1| - 1.3e-27 96.0 3.4 1.4e-27 95.9 3.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5350) NurA PF09376.10 gi|91774076|ref|YP_566768.1| - 7.2e-08 32.4 0.0 9.4e-08 32.0 0.0 1.3 1 0 0 1 1 1 1 NurA domain COQ9 PF08511.11 gi|91774076|ref|YP_566768.1| - 0.057 13.2 0.0 2.9 7.7 0.0 2.5 2 0 0 2 2 2 0 COQ9 DUF87 PF01935.17 gi|91774077|ref|YP_566769.1| - 3.2e-10 40.5 0.0 9.6e-10 38.9 0.0 2.0 1 1 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|91774077|ref|YP_566769.1| - 2.2e-09 36.5 0.0 6e-06 25.1 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) DEAD PF00270.29 gi|91774077|ref|YP_566769.1| - 4.3e-06 26.6 0.0 0.013 15.3 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|91774077|ref|YP_566769.1| - 9.8e-06 25.9 0.0 0.004 17.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_10 PF12846.7 gi|91774077|ref|YP_566769.1| - 1.8e-05 23.9 0.0 0.1 11.5 0.0 2.2 2 0 0 2 2 2 2 AAA-like domain AAA PF00004.29 gi|91774077|ref|YP_566769.1| - 4.1e-05 24.0 1.2 0.36 11.3 0.1 2.8 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|91774077|ref|YP_566769.1| - 0.00036 21.0 0.0 0.17 12.2 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain TrwB_AAD_bind PF10412.9 gi|91774077|ref|YP_566769.1| - 0.00048 19.2 0.0 0.0013 17.7 0.0 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain ResIII PF04851.15 gi|91774077|ref|YP_566769.1| - 0.00063 19.8 0.0 1.3 9.0 0.0 2.3 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit AAA_7 PF12775.7 gi|91774077|ref|YP_566769.1| - 0.0068 15.9 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF2075 PF09848.9 gi|91774077|ref|YP_566769.1| - 0.018 14.3 0.0 0.9 8.7 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) FtsK_SpoIIIE PF01580.18 gi|91774077|ref|YP_566769.1| - 0.045 13.1 0.0 0.5 9.7 0.0 2.1 2 0 0 2 2 2 0 FtsK/SpoIIIE family Zot PF05707.12 gi|91774077|ref|YP_566769.1| - 0.047 13.3 0.0 0.1 12.2 0.0 1.5 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) T2SSE PF00437.20 gi|91774077|ref|YP_566769.1| - 0.062 12.4 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 gi|91774077|ref|YP_566769.1| - 0.1 13.0 0.0 0.24 11.8 0.0 1.7 1 0 0 1 1 1 0 RNA helicase RHH_1 PF01402.21 gi|91774078|ref|YP_566770.1| - 0.0081 16.1 0.0 0.017 15.1 0.0 1.6 1 1 0 1 1 1 1 Ribbon-helix-helix protein, copG family DUF1241 PF06840.11 gi|91774078|ref|YP_566770.1| - 0.11 12.2 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) AP_endonuc_2 PF01261.24 gi|91774079|ref|YP_566771.1| - 4.4e-31 108.0 0.0 5.4e-31 107.7 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel RNA_binding PF01877.17 gi|91774080|ref|YP_566772.1| - 2.9e-17 63.0 0.0 5.8e-17 62.1 0.0 1.5 1 1 0 1 1 1 1 RNA binding AAA_17 PF13207.6 gi|91774081|ref|YP_566773.1| - 1.9e-13 51.0 0.1 2.5e-13 50.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|91774081|ref|YP_566773.1| - 2e-10 41.3 0.1 2.7e-10 40.9 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|91774081|ref|YP_566773.1| - 0.0042 17.3 0.0 0.0093 16.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain Dus PF01207.17 gi|91774082|ref|YP_566774.1| - 1.2e-70 238.1 0.0 1.5e-70 237.7 0.0 1.1 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) ThiG PF05690.14 gi|91774082|ref|YP_566774.1| - 1.5e-05 24.4 0.1 2.8e-05 23.6 0.1 1.4 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 gi|91774082|ref|YP_566774.1| - 0.00092 18.7 0.0 0.0029 17.1 0.0 1.7 1 1 1 2 2 2 1 Histidine biosynthesis protein POR PF01558.18 gi|91774083|ref|YP_566775.1| - 9.3e-41 139.8 0.1 1.1e-40 139.6 0.1 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Fer4 PF00037.27 gi|91774084|ref|YP_566776.1| - 2.4e-15 55.6 12.8 6.7e-09 35.2 3.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|91774084|ref|YP_566776.1| - 1.1e-11 44.3 11.6 3.9e-06 26.7 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91774084|ref|YP_566776.1| - 2.1e-11 43.7 5.6 3.1e-11 43.2 5.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91774084|ref|YP_566776.1| - 2.2e-10 40.0 8.7 2e-05 24.4 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|91774084|ref|YP_566776.1| - 2.2e-09 37.8 5.4 0.00024 21.6 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91774084|ref|YP_566776.1| - 4.2e-08 33.2 7.5 6.8e-08 32.6 7.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91774084|ref|YP_566776.1| - 2.6e-07 30.6 20.7 1.3e-05 25.2 11.1 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91774084|ref|YP_566776.1| - 5.1e-07 30.5 7.7 0.00024 21.9 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|91774084|ref|YP_566776.1| - 2.3e-06 28.0 4.0 0.028 14.9 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91774084|ref|YP_566776.1| - 0.0015 18.8 15.1 0.0071 16.8 1.3 2.6 2 1 1 3 3 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91774084|ref|YP_566776.1| - 0.0044 17.4 12.5 0.097 13.1 1.4 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91774084|ref|YP_566776.1| - 0.008 16.9 13.7 0.2 12.4 2.6 2.6 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|91774084|ref|YP_566776.1| - 0.011 16.3 13.5 0.019 15.5 2.0 2.5 1 1 2 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|91774084|ref|YP_566776.1| - 0.039 14.9 14.4 0.79 10.8 2.1 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|91774084|ref|YP_566776.1| - 0.069 14.0 11.4 0.25 12.2 1.7 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91774084|ref|YP_566776.1| - 0.29 11.3 8.6 1 9.6 8.7 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|91774084|ref|YP_566776.1| - 0.58 10.3 3.7 3.6 7.8 0.6 2.1 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S POR_N PF01855.19 gi|91774085|ref|YP_566777.1| - 3.8e-69 232.9 0.1 4.9e-69 232.6 0.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|91774085|ref|YP_566777.1| - 1.2e-30 105.8 0.1 2.7e-30 104.7 0.1 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|91774085|ref|YP_566777.1| - 2.4e-08 33.9 0.0 5.1e-08 32.8 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain TetR_C_31 PF17940.1 gi|91774085|ref|YP_566777.1| - 0.12 12.6 0.1 0.23 11.7 0.1 1.4 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TPP_enzyme_C PF02775.21 gi|91774086|ref|YP_566778.1| - 1.5e-24 86.5 0.2 2.1e-24 86.0 0.2 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Na_Ala_symp PF01235.17 gi|91774087|ref|YP_566779.1| - 1.6e-141 472.2 34.7 2.1e-141 471.8 34.7 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family DUF772 PF05598.11 gi|91774088|ref|YP_566780.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91774088|ref|YP_566780.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91774088|ref|YP_566780.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91774088|ref|YP_566780.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91774088|ref|YP_566780.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease Helicase_C PF00271.31 gi|91774089|ref|YP_566781.1| - 1.1e-22 80.5 0.4 4e-22 78.6 0.1 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|91774089|ref|YP_566781.1| - 2.3e-09 37.5 0.6 3.4e-06 27.2 0.0 3.5 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit PLDc_2 PF13091.6 gi|91774089|ref|YP_566781.1| - 3.6e-07 30.1 0.0 1.4e-06 28.3 0.0 2.1 1 0 0 1 1 1 1 PLD-like domain SNF2_N PF00176.23 gi|91774089|ref|YP_566781.1| - 0.00014 20.7 0.0 0.0005 18.9 0.0 2.0 1 1 1 2 2 2 1 SNF2 family N-terminal domain Flavi_DEAD PF07652.14 gi|91774089|ref|YP_566781.1| - 0.15 12.1 0.0 0.37 10.8 0.0 1.6 1 0 0 1 1 1 0 Flavivirus DEAD domain TTRAP PF14203.6 gi|91774089|ref|YP_566781.1| - 0.25 11.4 2.4 0.91 9.6 0.0 3.0 3 0 0 3 3 3 0 Putative tranposon-transfer assisting protein CENP-H PF05837.12 gi|91774089|ref|YP_566781.1| - 6.3 7.2 6.5 3 8.3 1.7 2.5 2 0 0 2 2 2 0 Centromere protein H (CENP-H) TaqI_C PF12950.7 gi|91774090|ref|YP_566782.1| - 1.4e-34 118.8 0.8 1.4e-34 118.8 0.8 2.6 3 0 0 3 3 3 1 TaqI-like C-terminal specificity domain N6_Mtase PF02384.16 gi|91774090|ref|YP_566782.1| - 1.6e-12 47.3 5.0 5.8e-09 35.7 1.0 3.7 3 1 0 3 3 3 2 N-6 DNA Methylase Eco57I PF07669.11 gi|91774090|ref|YP_566782.1| - 2e-10 41.1 0.1 1.2e-09 38.6 0.1 2.4 1 0 0 1 1 1 1 Eco57I restriction-modification methylase HhH-GPD PF00730.25 gi|91774091|ref|YP_566783.1| - 1.1e-24 87.0 0.0 1.4e-24 86.6 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|91774091|ref|YP_566783.1| - 0.00013 21.6 0.0 0.00034 20.3 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF3349 PF11829.8 gi|91774091|ref|YP_566783.1| - 0.0064 17.2 0.1 0.017 15.9 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3349) HHH_5 PF14520.6 gi|91774091|ref|YP_566783.1| - 0.021 15.4 0.1 2.6 8.7 0.0 2.6 2 0 0 2 2 2 0 Helix-hairpin-helix domain 5_3_exonuc PF01367.20 gi|91774091|ref|YP_566783.1| - 0.022 15.3 0.4 0.12 13.0 0.1 2.0 1 1 1 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold HTH_35 PF13693.6 gi|91774091|ref|YP_566783.1| - 0.027 14.5 0.0 0.16 12.1 0.0 2.3 3 1 0 3 3 3 0 Winged helix-turn-helix DNA-binding HHH_2 PF12826.7 gi|91774091|ref|YP_566783.1| - 0.094 12.8 0.1 2.5 8.3 0.0 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|91774091|ref|YP_566783.1| - 0.094 13.1 3.2 0.16 12.3 3.2 1.4 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III DUF3685 PF12452.8 gi|91774092|ref|YP_566784.1| - 0.093 12.4 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) DUF4819 PF16090.5 gi|91774092|ref|YP_566784.1| - 0.14 12.2 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4819) IMS PF00817.20 gi|91774093|ref|YP_566785.1| - 1.3e-41 142.1 0.1 2.4e-41 141.2 0.1 1.4 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 gi|91774093|ref|YP_566785.1| - 1.1e-09 39.0 0.3 2.4e-09 37.9 0.3 1.5 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|91774093|ref|YP_566785.1| - 8.4e-09 35.3 0.1 2.4e-08 33.8 0.1 1.8 1 0 0 1 1 1 1 IMS family HHH motif Cdd1 PF11731.8 gi|91774093|ref|YP_566785.1| - 0.0018 18.5 0.0 0.0039 17.4 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus HHH_5 PF14520.6 gi|91774093|ref|YP_566785.1| - 0.014 16.0 0.5 0.091 13.4 0.1 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix domain GP52 PF17468.2 gi|91774094|ref|YP_566786.1| - 0.0083 16.3 0.0 1.5 9.1 0.0 2.3 2 0 0 2 2 2 2 Phage gene product 52 Glyco_transf_7N PF13733.6 gi|91774096|ref|YP_566788.1| - 0.057 13.1 0.1 0.067 12.8 0.1 1.2 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 DUF772 PF05598.11 gi|91774097|ref|YP_566789.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91774097|ref|YP_566789.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91774097|ref|YP_566789.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91774097|ref|YP_566789.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91774097|ref|YP_566789.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease HEAT_2 PF13646.6 gi|91774098|ref|YP_566790.1| - 7.8e-91 298.6 17.3 5.2e-14 52.4 0.1 6.8 1 1 8 9 9 9 9 HEAT repeats HEAT_PBS PF03130.16 gi|91774098|ref|YP_566790.1| - 6.6e-44 144.1 0.0 0.00025 21.4 0.0 12.5 13 0 0 13 13 12 8 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|91774098|ref|YP_566790.1| - 1.5e-42 140.0 0.5 0.0032 17.6 0.0 13.4 13 0 0 13 13 13 9 HEAT repeat Arm PF00514.23 gi|91774098|ref|YP_566790.1| - 2.3e-22 78.3 0.0 0.067 13.3 0.0 12.3 13 1 1 14 14 14 4 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 gi|91774098|ref|YP_566790.1| - 6.7e-22 77.6 1.2 0.27 11.8 0.0 11.4 10 4 3 13 13 13 5 HEAT-like repeat Vac14_Fab1_bd PF12755.7 gi|91774098|ref|YP_566790.1| - 1.2e-19 70.7 7.0 0.1 13.2 0.0 8.3 5 2 3 8 8 8 5 Vacuolar 14 Fab1-binding region Cnd1 PF12717.7 gi|91774098|ref|YP_566790.1| - 5.7e-12 46.0 15.6 0.087 12.9 0.2 7.9 2 1 3 7 7 7 4 non-SMC mitotic condensation complex subunit 1 RasGEF_N_2 PF14663.6 gi|91774098|ref|YP_566790.1| - 6.5e-10 39.4 9.7 0.16 12.4 0.0 7.2 7 1 0 7 7 7 3 Rapamycin-insensitive companion of mTOR RasGEF_N domain Aconitase_B_N PF11791.8 gi|91774098|ref|YP_566790.1| - 1e-06 28.9 3.4 2.2 8.3 0.0 7.1 1 1 4 7 7 7 1 Aconitate B N-terminal domain Adaptin_N PF01602.20 gi|91774098|ref|YP_566790.1| - 4.5e-06 25.5 8.5 0.12 10.9 0.2 5.1 1 1 4 6 6 6 2 Adaptin N terminal region API5 PF05918.11 gi|91774098|ref|YP_566790.1| - 0.0017 17.3 2.7 0.66 8.7 0.1 3.2 2 1 1 3 3 3 2 Apoptosis inhibitory protein 5 (API5) GlutR_dimer PF00745.20 gi|91774098|ref|YP_566790.1| - 0.0023 18.3 1.7 1 9.9 0.0 5.0 4 2 1 5 5 5 1 Glutamyl-tRNAGlu reductase, dimerisation domain IFS PF16718.5 gi|91774098|ref|YP_566790.1| - 0.012 15.7 3.8 0.092 12.8 0.3 2.9 2 1 1 3 3 3 0 Immunity factor for SPN CLASP_N PF12348.8 gi|91774098|ref|YP_566790.1| - 0.016 14.8 0.4 1.6 8.2 0.0 3.5 3 2 0 3 3 3 0 CLASP N terminal BRCC36_C PF18110.1 gi|91774098|ref|YP_566790.1| - 0.046 13.9 0.0 1.3 9.2 0.0 3.1 2 1 0 2 2 2 0 BRCC36 C-terminal helical domain ParcG PF10274.9 gi|91774098|ref|YP_566790.1| - 0.066 13.3 1.0 12 6.0 0.1 3.0 3 0 0 3 3 3 0 Parkin co-regulated protein SicP-binding PF09119.10 gi|91774098|ref|YP_566790.1| - 0.07 13.1 0.0 2.7 8.1 0.0 3.4 4 0 0 4 4 4 0 SicP binding RAP PF08373.10 gi|91774099|ref|YP_566791.1| - 0.024 14.7 0.8 0.083 13.0 0.1 2.0 1 1 1 2 2 2 0 RAP domain Hydantoinase_B PF02538.14 gi|91774100|ref|YP_566792.1| - 6.2e-196 651.8 0.4 1.1e-195 651.0 0.4 1.3 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.18 gi|91774100|ref|YP_566792.1| - 2.2e-116 388.2 0.4 5.9e-116 386.8 0.4 1.8 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|91774100|ref|YP_566792.1| - 1.9e-65 219.9 0.0 8.7e-64 214.5 0.0 2.6 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|91774100|ref|YP_566792.1| - 0.083 11.5 0.3 5.3 5.5 0.0 2.3 2 0 0 2 2 2 0 MutL protein Fib_alpha PF08702.10 gi|91774100|ref|YP_566792.1| - 0.13 12.5 0.2 0.4 10.8 0.2 1.8 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family PAP2 PF01569.21 gi|91774101|ref|YP_566793.1| - 8.9e-16 57.9 12.1 3.3e-15 56.0 12.1 1.9 1 1 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 gi|91774101|ref|YP_566793.1| - 5.6e-08 32.7 9.4 5.6e-08 32.7 9.4 2.0 1 1 1 2 2 2 2 PAP2 superfamily DUF212 PF02681.14 gi|91774101|ref|YP_566793.1| - 0.0048 17.0 4.8 0.092 12.9 1.7 2.3 1 1 1 2 2 2 2 Divergent PAP2 family PAP2_C PF14360.6 gi|91774101|ref|YP_566793.1| - 0.32 11.6 12.9 0.07 13.7 3.7 2.3 2 0 0 2 2 2 0 PAP2 superfamily C-terminal GATase_7 PF13537.6 gi|91774102|ref|YP_566794.1| - 1.4e-24 86.3 0.0 2.4e-24 85.6 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|91774102|ref|YP_566794.1| - 1.3e-22 80.4 0.0 2.3e-22 79.6 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|91774102|ref|YP_566794.1| - 6.7e-07 28.5 0.0 1.1e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Pribosyltran PF00156.27 gi|91774102|ref|YP_566794.1| - 1.8e-06 27.6 0.0 3.1e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Ribosomal_L37e PF01907.19 gi|91774103|ref|YP_566795.1| - 2.8e-21 75.4 13.9 3.1e-21 75.3 13.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e MraY_sig1 PF10555.9 gi|91774103|ref|YP_566795.1| - 0.26 10.9 1.3 0.36 10.4 1.3 1.2 1 0 0 1 1 1 0 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 zn-ribbon_14 PF16503.5 gi|91774103|ref|YP_566795.1| - 0.41 10.2 0.2 0.41 10.2 0.2 2.6 3 0 0 3 3 3 0 Zinc-ribbon YhfH PF14149.6 gi|91774103|ref|YP_566795.1| - 0.43 10.6 6.1 0.36 10.8 0.6 2.3 1 1 1 2 2 2 0 YhfH-like protein Med16 PF11635.8 gi|91774103|ref|YP_566795.1| - 6.4 4.6 7.1 6.5 4.5 7.1 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 LSM PF01423.22 gi|91774104|ref|YP_566796.1| - 2.7e-22 78.2 0.4 2.9e-22 78.1 0.4 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|91774104|ref|YP_566796.1| - 0.0065 16.6 0.0 0.0073 16.4 0.0 1.2 1 0 0 1 1 1 1 Ataxin 2 SM domain Phos_pyr_kin PF08543.12 gi|91774105|ref|YP_566797.1| - 9e-80 267.6 2.1 1.2e-79 267.1 2.1 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|91774105|ref|YP_566797.1| - 2.4e-62 209.4 1.0 5.8e-62 208.2 1.0 1.6 1 0 0 1 1 1 1 Thiamine-phosphate synthase PfkB PF00294.24 gi|91774105|ref|YP_566797.1| - 2.6e-10 40.1 0.6 4.2e-10 39.4 0.6 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Usp PF00582.26 gi|91774106|ref|YP_566798.1| - 1.6e-26 93.5 0.7 2.2e-25 89.8 0.7 2.0 1 1 0 1 1 1 1 Universal stress protein family tRNA-synt_1 PF00133.22 gi|91774107|ref|YP_566799.1| - 1.3e-129 433.3 7.2 1.9e-128 429.4 7.2 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|91774107|ref|YP_566799.1| - 1.9e-39 135.0 0.0 3.4e-39 134.2 0.0 1.3 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|91774107|ref|YP_566799.1| - 2e-22 79.5 2.6 2.1e-11 43.2 0.0 3.4 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|91774107|ref|YP_566799.1| - 8.7e-07 28.6 0.0 0.00025 20.5 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|91774107|ref|YP_566799.1| - 0.00027 20.5 0.0 0.017 14.6 0.0 2.4 1 1 1 2 2 2 2 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|91774107|ref|YP_566799.1| - 0.0075 15.2 0.1 0.53 9.1 0.0 2.5 2 1 0 2 2 2 1 tRNA synthetases class I (K) DUF4451 PF14616.6 gi|91774107|ref|YP_566799.1| - 0.028 14.6 1.1 4.2 7.6 0.2 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4451) Response_reg PF00072.24 gi|91774108|ref|YP_566800.1| - 5.5e-28 97.4 0.8 1.1e-27 96.4 0.8 1.5 1 0 0 1 1 1 1 Response regulator receiver domain tRNA-synt_2c PF01411.19 gi|91774109|ref|YP_566801.1| - 8.2e-132 440.5 0.3 1.4e-131 439.8 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|91774109|ref|YP_566801.1| - 5.1e-24 85.3 1.3 1.3e-23 83.9 1.3 1.8 1 0 0 1 1 1 1 DHHA1 domain tRNA_SAD PF07973.14 gi|91774109|ref|YP_566801.1| - 2.7e-12 46.6 0.3 6.1e-12 45.5 0.3 1.7 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DUF2205 PF10224.9 gi|91774109|ref|YP_566801.1| - 0.013 15.5 0.6 0.033 14.2 0.6 1.6 1 0 0 1 1 1 0 Short coiled-coil protein Herpes_UL37_1 PF03970.13 gi|91774109|ref|YP_566801.1| - 0.027 13.7 0.0 0.15 11.2 0.0 2.0 2 0 0 2 2 2 0 Herpesvirus UL37 tegument protein DUF2489 PF10675.9 gi|91774109|ref|YP_566801.1| - 0.12 12.3 1.4 0.46 10.4 0.3 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2489) Lebercilin PF15619.6 gi|91774109|ref|YP_566801.1| - 2.4 7.8 6.5 1.6 8.3 0.1 2.6 3 0 0 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease SurE PF01975.17 gi|91774111|ref|YP_566803.1| - 3.3e-51 173.8 0.0 3.9e-51 173.6 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE SIL1 PF16782.5 gi|91774111|ref|YP_566803.1| - 0.14 11.4 0.0 0.19 10.9 0.0 1.2 1 0 0 1 1 1 0 Nucleotide exchange factor SIL1 WW PF00397.26 gi|91774111|ref|YP_566803.1| - 0.24 11.5 0.5 0.42 10.7 0.5 1.4 1 0 0 1 1 1 0 WW domain Sulfate_transp PF00916.20 gi|91774112|ref|YP_566804.1| - 2e-90 303.3 34.9 2.9e-90 302.8 34.9 1.2 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 gi|91774112|ref|YP_566804.1| - 2.6e-11 43.2 0.0 4.8e-11 42.3 0.0 1.4 1 0 0 1 1 1 1 STAS domain MFS_MOT1 PF16983.5 gi|91774112|ref|YP_566804.1| - 8.4e-06 26.2 6.7 8.4e-06 26.2 6.7 4.3 4 0 0 4 4 4 2 Molybdate transporter of MFS superfamily Radical_SAM PF04055.21 gi|91774113|ref|YP_566805.1| - 3.2e-31 109.0 0.1 8.3e-31 107.6 0.0 1.7 2 1 0 2 2 2 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|91774113|ref|YP_566805.1| - 2.8e-18 66.1 0.1 5.7e-18 65.1 0.1 1.5 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|91774113|ref|YP_566805.1| - 7.6e-07 29.5 0.1 2.4e-06 27.9 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|91774113|ref|YP_566805.1| - 1.2e-06 28.6 0.0 2.5e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain DNA_pol3_beta PF00712.19 gi|91774113|ref|YP_566805.1| - 0.045 13.9 0.0 0.097 12.8 0.0 1.6 1 0 0 1 1 1 0 DNA polymerase III beta subunit, N-terminal domain Imm9 PF15587.6 gi|91774113|ref|YP_566805.1| - 0.07 12.8 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 Immunity protein 9 PIN_12 PF16289.5 gi|91774113|ref|YP_566805.1| - 0.083 13.4 1.4 0.67 10.4 1.4 2.1 1 1 0 1 1 1 0 PIN domain GATase_3 PF07685.14 gi|91774114|ref|YP_566806.1| - 2e-34 118.9 0.0 3.1e-34 118.3 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|91774114|ref|YP_566806.1| - 1.2e-19 71.0 3.8 2.1e-17 63.6 3.8 2.3 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|91774114|ref|YP_566806.1| - 1.8e-19 70.1 0.1 3.4e-19 69.2 0.1 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF1611 PF07755.11 gi|91774114|ref|YP_566806.1| - 0.011 15.0 0.9 0.021 14.1 0.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain ParA PF10609.9 gi|91774114|ref|YP_566806.1| - 0.064 12.7 0.7 0.12 11.8 0.7 1.4 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|91774114|ref|YP_566806.1| - 0.067 13.1 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|91774114|ref|YP_566806.1| - 0.12 12.3 0.4 0.42 10.5 0.2 2.0 2 0 0 2 2 2 0 NTPase SNO PF01174.19 gi|91774114|ref|YP_566806.1| - 0.14 12.0 0.0 0.45 10.3 0.0 1.8 2 0 0 2 2 2 0 SNO glutamine amidotransferase family DNA_primase_lrg PF04104.14 gi|91774115|ref|YP_566807.1| - 2.2e-35 122.3 0.1 5.1e-35 121.2 0.1 1.5 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Skp1 PF01466.19 gi|91774115|ref|YP_566807.1| - 0.013 15.6 0.6 0.03 14.4 0.0 1.9 2 0 0 2 2 2 0 Skp1 family, dimerisation domain zf-AD PF07776.15 gi|91774115|ref|YP_566807.1| - 0.12 12.7 0.0 0.25 11.6 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) PCNA_N PF00705.18 gi|91774116|ref|YP_566808.1| - 4.6e-14 52.2 0.7 4.7e-13 49.0 0.1 2.3 2 1 1 3 3 3 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|91774116|ref|YP_566808.1| - 9.7e-10 38.7 0.0 2.9e-09 37.1 0.0 1.8 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|91774116|ref|YP_566808.1| - 0.0092 15.5 0.0 0.016 14.7 0.0 1.5 1 1 0 1 1 1 1 Rad9 TFIIS_C PF01096.18 gi|91774117|ref|YP_566809.1| - 2.4e-17 62.5 4.8 2.4e-17 62.5 4.8 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|91774117|ref|YP_566809.1| - 5.8e-10 38.9 2.0 5.8e-10 38.9 2.0 3.2 3 0 0 3 3 3 2 RNA polymerases M/15 Kd subunit TackOD1 PF18551.1 gi|91774117|ref|YP_566809.1| - 0.00053 19.7 6.2 0.0081 15.9 6.3 2.4 1 1 0 1 1 1 1 Thaumarchaeal output domain 1 Zn_Tnp_IS1595 PF12760.7 gi|91774117|ref|YP_566809.1| - 0.0028 17.6 10.6 0.15 12.1 0.6 2.6 2 1 0 2 2 2 2 Transposase zinc-ribbon domain DZR PF12773.7 gi|91774117|ref|YP_566809.1| - 0.012 15.7 10.1 0.017 15.1 1.4 2.6 2 1 0 2 2 2 0 Double zinc ribbon OrfB_Zn_ribbon PF07282.11 gi|91774117|ref|YP_566809.1| - 0.025 14.5 9.8 0.29 11.1 1.1 2.5 2 1 0 2 2 2 0 Putative transposase DNA-binding domain zinc-ribbons_6 PF07191.12 gi|91774117|ref|YP_566809.1| - 0.11 12.5 0.7 0.11 12.5 0.7 2.6 2 1 0 2 2 2 0 zinc-ribbons HypA PF01155.19 gi|91774117|ref|YP_566809.1| - 0.16 12.0 8.0 0.74 9.9 3.7 2.8 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Nudix_N_2 PF14803.6 gi|91774117|ref|YP_566809.1| - 0.19 11.7 6.0 9.6 6.2 0.1 3.6 3 1 0 3 3 3 0 Nudix N-terminal DNA_RNApol_7kD PF03604.13 gi|91774117|ref|YP_566809.1| - 0.38 10.5 9.9 0.94 9.2 1.7 2.9 3 0 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit IBR PF01485.21 gi|91774117|ref|YP_566809.1| - 0.39 11.0 13.0 0.13 12.5 2.5 3.0 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain zf-IS66 PF13005.7 gi|91774117|ref|YP_566809.1| - 0.7 10.3 6.9 44 4.6 4.7 3.4 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 A2L_zn_ribbon PF08792.10 gi|91774117|ref|YP_566809.1| - 0.86 9.4 9.6 45 3.9 0.1 4.0 4 0 0 4 4 4 0 A2L zinc ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|91774117|ref|YP_566809.1| - 1.1 9.3 9.7 4.3 7.4 1.0 3.5 3 1 0 3 3 3 0 PhnA Zinc-Ribbon CxC3 PF18804.1 gi|91774117|ref|YP_566809.1| - 1.3 8.9 5.1 0.76 9.7 1.6 2.2 1 1 1 2 2 2 0 CxC3 like cysteine cluster associated with KDZ transposases zinc_ribbon_4 PF13717.6 gi|91774117|ref|YP_566809.1| - 1.5 8.8 15.8 7.7 6.5 0.4 4.1 3 1 1 4 4 4 0 zinc-ribbon domain zf-ACC PF17848.1 gi|91774117|ref|YP_566809.1| - 1.7 8.8 15.6 2.8 8.1 0.3 4.1 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain zinc_ribbon_2 PF13240.6 gi|91774117|ref|YP_566809.1| - 2.9 7.7 17.8 2.7 7.8 0.4 4.0 4 0 0 4 4 4 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|91774117|ref|YP_566809.1| - 3 7.4 15.8 0.17 11.3 3.8 2.9 3 1 0 3 3 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|91774117|ref|YP_566809.1| - 3.6 7.4 18.9 1.9 8.3 1.7 4.0 4 0 0 4 4 4 0 Rubredoxin metal binding domain CpXC PF14353.6 gi|91774117|ref|YP_566809.1| - 6.4 6.8 8.3 0.48 10.5 0.4 2.6 2 1 1 3 3 3 0 CpXC protein zf-C2H2_11 PF16622.5 gi|91774117|ref|YP_566809.1| - 9.6 6.1 13.3 3.1 7.6 0.2 3.3 4 0 0 4 4 4 0 zinc-finger C2H2-type NUDIX PF00293.28 gi|91774118|ref|YP_566810.1| - 8.6e-22 77.6 0.0 1e-21 77.4 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 gi|91774118|ref|YP_566810.1| - 0.00029 20.4 0.0 0.00044 19.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4916) Exosortase_EpsH PF09721.10 gi|91774119|ref|YP_566811.1| - 9.1e-13 48.3 15.9 1.9e-12 47.3 15.9 1.5 1 1 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) Deltameth_res PF16020.5 gi|91774119|ref|YP_566811.1| - 1.5 8.7 5.0 5.9 6.8 0.4 3.5 3 0 0 3 3 3 0 Deltamethrin resistance PS_Dcarbxylase PF02666.15 gi|91774120|ref|YP_566812.1| - 2.5e-29 102.3 5.1 1e-26 93.7 1.8 2.1 1 1 1 2 2 2 2 Phosphatidylserine decarboxylase Meiosis_expr PF15163.6 gi|91774120|ref|YP_566812.1| - 0.1 13.3 0.0 0.17 12.6 0.0 1.3 1 0 0 1 1 1 0 Meiosis-expressed CDP-OH_P_transf PF01066.21 gi|91774121|ref|YP_566813.1| - 2.3e-12 47.5 2.0 2.3e-12 47.5 2.0 3.4 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase PhoR PF11808.8 gi|91774121|ref|YP_566813.1| - 1.4 9.4 0.0 1.4 9.4 0.0 3.1 4 0 0 4 4 4 0 Phosphate regulon sensor protein PhoR BatA PF07584.11 gi|91774121|ref|YP_566813.1| - 3.5 8.1 0.0 3.5 8.1 0.0 3.2 2 1 1 3 3 3 0 Aerotolerance regulator N-terminal AAA_2 PF07724.14 gi|91774122|ref|YP_566814.1| - 2.3e-61 206.8 1.8 2.4e-57 193.8 0.1 3.6 3 0 0 3 3 3 2 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 gi|91774122|ref|YP_566814.1| - 6.5e-35 119.2 4.4 6.5e-35 119.2 4.4 3.9 3 0 0 3 3 3 1 AAA lid domain Clp_N PF02861.20 gi|91774122|ref|YP_566814.1| - 2.6e-26 91.5 1.2 1.9e-15 56.7 0.2 3.2 2 0 0 2 2 2 2 Clp amino terminal domain, pathogenicity island component AAA PF00004.29 gi|91774122|ref|YP_566814.1| - 2.5e-23 83.0 0.1 4.7e-10 40.0 0.1 3.1 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 gi|91774122|ref|YP_566814.1| - 3.8e-23 81.4 1.0 3.8e-23 81.4 1.0 3.3 3 0 0 3 3 2 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 gi|91774122|ref|YP_566814.1| - 5.8e-17 62.0 0.3 1e-12 48.3 0.0 3.8 3 1 1 4 4 4 2 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|91774122|ref|YP_566814.1| - 4.1e-09 36.4 0.1 3.8e-06 26.7 0.0 2.8 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_16 PF13191.6 gi|91774122|ref|YP_566814.1| - 7.3e-09 36.2 8.1 0.00014 22.3 0.0 5.0 5 1 1 6 6 4 2 AAA ATPase domain AAA_22 PF13401.6 gi|91774122|ref|YP_566814.1| - 1.7e-08 34.8 0.8 0.043 14.1 0.1 4.7 3 2 0 3 3 3 2 AAA domain AAA_7 PF12775.7 gi|91774122|ref|YP_566814.1| - 1.5e-07 31.1 0.0 0.0061 16.1 0.0 3.1 3 0 0 3 3 3 2 P-loop containing dynein motor region IstB_IS21 PF01695.17 gi|91774122|ref|YP_566814.1| - 2.3e-07 30.7 0.0 0.0069 16.1 0.0 3.0 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_14 PF13173.6 gi|91774122|ref|YP_566814.1| - 7.9e-07 29.2 0.0 0.019 15.0 0.0 2.9 2 0 0 2 2 2 2 AAA domain NACHT PF05729.12 gi|91774122|ref|YP_566814.1| - 3.9e-06 26.9 0.0 0.018 14.9 0.0 3.0 2 1 0 2 2 2 2 NACHT domain ATPase_2 PF01637.18 gi|91774122|ref|YP_566814.1| - 6.5e-06 26.2 7.6 0.14 12.0 0.0 4.8 3 2 2 5 5 4 2 ATPase domain predominantly from Archaea TniB PF05621.11 gi|91774122|ref|YP_566814.1| - 7.6e-06 25.5 0.0 0.0048 16.3 0.0 3.6 2 1 0 2 2 2 1 Bacterial TniB protein Roc PF08477.13 gi|91774122|ref|YP_566814.1| - 1.2e-05 25.5 0.0 0.083 13.1 0.0 3.4 3 0 0 3 3 3 1 Ras of Complex, Roc, domain of DAPkinase RsgA_GTPase PF03193.16 gi|91774122|ref|YP_566814.1| - 4.3e-05 23.5 0.0 0.35 10.8 0.0 3.3 2 1 1 3 3 3 2 RsgA GTPase AAA_18 PF13238.6 gi|91774122|ref|YP_566814.1| - 5.3e-05 23.8 0.1 0.037 14.6 0.0 3.8 3 0 0 3 3 2 1 AAA domain RNA_helicase PF00910.22 gi|91774122|ref|YP_566814.1| - 8.2e-05 22.9 0.1 0.3 11.5 0.0 3.2 3 0 0 3 3 2 1 RNA helicase Mg_chelatase PF01078.21 gi|91774122|ref|YP_566814.1| - 9.7e-05 21.8 0.5 0.42 9.9 0.1 3.8 3 1 0 3 3 2 1 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 gi|91774122|ref|YP_566814.1| - 0.00028 20.5 0.0 0.19 11.3 0.0 2.8 2 0 0 2 2 2 1 AAA domain PhoH PF02562.16 gi|91774122|ref|YP_566814.1| - 0.0003 20.3 0.0 0.33 10.4 0.0 2.9 3 0 0 3 3 2 1 PhoH-like protein Zeta_toxin PF06414.12 gi|91774122|ref|YP_566814.1| - 0.00031 20.1 0.1 0.0084 15.4 0.0 3.0 4 0 0 4 4 2 1 Zeta toxin RuvB_N PF05496.12 gi|91774122|ref|YP_566814.1| - 0.00052 19.8 3.1 0.049 13.4 0.0 3.8 3 1 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain ResIII PF04851.15 gi|91774122|ref|YP_566814.1| - 0.00064 19.8 0.7 1.4 8.9 0.0 4.1 3 1 0 4 4 4 1 Type III restriction enzyme, res subunit DUF815 PF05673.13 gi|91774122|ref|YP_566814.1| - 0.0007 18.8 2.1 0.52 9.4 0.1 3.5 3 1 0 3 3 3 1 Protein of unknown function (DUF815) ABC_tran PF00005.27 gi|91774122|ref|YP_566814.1| - 0.00079 19.9 0.5 0.14 12.7 0.0 3.5 3 0 0 3 3 3 1 ABC transporter Torsin PF06309.11 gi|91774122|ref|YP_566814.1| - 0.0011 19.1 0.0 0.0033 17.5 0.0 1.8 1 0 0 1 1 1 1 Torsin AAA_28 PF13521.6 gi|91774122|ref|YP_566814.1| - 0.0012 19.2 0.1 0.67 10.2 0.0 3.8 3 0 0 3 3 3 1 AAA domain TsaE PF02367.17 gi|91774122|ref|YP_566814.1| - 0.0022 18.0 0.0 3.3 7.7 0.0 2.9 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Bac_DnaA PF00308.18 gi|91774122|ref|YP_566814.1| - 0.0026 17.6 0.0 2.9 7.7 0.0 3.4 2 0 0 2 2 2 1 Bacterial dnaA protein T2SSE PF00437.20 gi|91774122|ref|YP_566814.1| - 0.0027 16.8 0.1 0.062 12.4 0.0 2.6 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_33 PF13671.6 gi|91774122|ref|YP_566814.1| - 0.012 15.8 0.0 0.77 9.9 0.0 2.8 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|91774122|ref|YP_566814.1| - 0.016 14.9 0.0 6.3 6.5 0.0 3.2 2 0 0 2 2 2 0 AAA domain Ras PF00071.22 gi|91774122|ref|YP_566814.1| - 0.02 14.5 0.2 9 5.9 0.0 3.3 3 0 0 3 3 3 0 Ras family PV-1 PF06637.11 gi|91774122|ref|YP_566814.1| - 0.029 13.2 4.9 0.057 12.3 4.9 1.4 1 0 0 1 1 1 0 PV-1 protein (PLVAP) AAA_29 PF13555.6 gi|91774122|ref|YP_566814.1| - 0.032 14.0 0.0 9.2 6.1 0.0 2.8 3 0 0 3 3 2 0 P-loop containing region of AAA domain DNA_pol3_delta2 PF13177.6 gi|91774122|ref|YP_566814.1| - 0.039 13.7 0.0 0.3 10.9 0.0 2.4 1 1 0 1 1 1 0 DNA polymerase III, delta subunit SRP54 PF00448.22 gi|91774122|ref|YP_566814.1| - 0.054 13.1 0.0 10 5.7 0.0 2.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_3 PF07726.11 gi|91774122|ref|YP_566814.1| - 0.062 13.2 0.1 1.1 9.1 0.0 2.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|91774122|ref|YP_566814.1| - 0.067 13.5 0.0 6.1 7.2 0.1 3.6 3 1 0 3 3 3 0 AAA domain PduV-EutP PF10662.9 gi|91774122|ref|YP_566814.1| - 0.074 12.8 0.0 1.9 8.3 0.0 2.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_23 PF13476.6 gi|91774122|ref|YP_566814.1| - 0.31 11.5 0.0 0.31 11.5 0.0 5.1 3 2 0 3 3 2 0 AAA domain DUF87 PF01935.17 gi|91774122|ref|YP_566814.1| - 2.3 8.3 0.0 2.3 8.3 0.0 5.1 5 1 0 5 5 4 0 Helicase HerA, central domain PAS_3 PF08447.12 gi|91774123|ref|YP_566815.1| - 3.2e-15 56.2 0.0 7.9e-15 54.9 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|91774123|ref|YP_566815.1| - 3.2e-08 33.8 0.0 5.2e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS PF00989.25 gi|91774123|ref|YP_566815.1| - 5.3e-07 29.6 0.0 9.9e-07 28.8 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|91774123|ref|YP_566815.1| - 1.2e-05 25.5 0.0 3.6e-05 24.0 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS_11 PF14598.6 gi|91774123|ref|YP_566815.1| - 8.9e-05 22.6 0.0 0.0046 17.1 0.0 3.0 2 1 1 3 3 3 1 PAS domain HATPase_c PF02518.26 gi|91774124|ref|YP_566816.1| - 4.7e-22 78.6 0.5 4.3e-21 75.5 0.1 2.6 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|91774124|ref|YP_566816.1| - 1.7e-12 47.1 0.2 9e-07 28.8 0.0 3.1 2 0 0 2 2 2 2 PAS domain PAS_9 PF13426.7 gi|91774124|ref|YP_566816.1| - 3.9e-10 39.9 0.8 3.3e-06 27.3 0.1 2.7 2 0 0 2 2 2 2 PAS domain PAS_7 PF12860.7 gi|91774124|ref|YP_566816.1| - 5.9e-08 32.9 0.0 2.6e-06 27.6 0.0 3.0 2 1 0 2 2 2 1 PAS fold PAS PF00989.25 gi|91774124|ref|YP_566816.1| - 8.9e-08 32.1 0.0 0.00017 21.6 0.0 2.6 2 0 0 2 2 2 2 PAS fold GAF PF01590.26 gi|91774124|ref|YP_566816.1| - 1.2e-05 25.9 0.0 6.5e-05 23.6 0.0 2.1 2 0 0 2 2 2 1 GAF domain GAF_2 PF13185.6 gi|91774124|ref|YP_566816.1| - 7.6e-05 23.0 0.0 0.00017 21.9 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.10 gi|91774124|ref|YP_566816.1| - 7.7e-05 22.9 0.0 0.11 12.7 0.0 2.6 2 1 0 2 2 2 2 PAS fold GAF_3 PF13492.6 gi|91774124|ref|YP_566816.1| - 0.00029 21.2 0.0 0.00065 20.1 0.0 1.6 1 0 0 1 1 1 1 GAF domain HATPase_c_2 PF13581.6 gi|91774124|ref|YP_566816.1| - 0.00066 19.6 0.0 0.0017 18.3 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HisKA PF00512.25 gi|91774124|ref|YP_566816.1| - 0.0032 17.5 0.1 0.0085 16.1 0.1 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 gi|91774124|ref|YP_566816.1| - 0.0073 16.2 2.2 0.065 13.1 0.0 2.9 2 1 0 2 2 2 1 GHKL domain SpoVT_C PF15714.5 gi|91774124|ref|YP_566816.1| - 0.05 13.7 0.0 1.2 9.2 0.0 2.6 2 0 0 2 2 2 0 Stage V sporulation protein T C-terminal, transcription factor CNOT11 PF10155.9 gi|91774124|ref|YP_566816.1| - 0.062 13.5 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 SPOB_a PF14689.6 gi|91774124|ref|YP_566816.1| - 0.31 10.8 1.8 0.9 9.3 0.0 2.7 4 0 0 4 4 4 0 Sensor_kinase_SpoOB-type, alpha-helical domain DHNA PF04038.12 gi|91774125|ref|YP_566817.1| - 8.4e-43 145.3 0.0 9.7e-43 145.1 0.0 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase Colipase_C PF02740.14 gi|91774125|ref|YP_566817.1| - 0.0092 16.1 0.1 0.018 15.2 0.1 1.4 1 0 0 1 1 1 1 Colipase, C-terminal domain DUF3794 PF12673.7 gi|91774125|ref|YP_566817.1| - 0.05 13.9 0.0 0.43 10.9 0.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3794) RRF PF01765.19 gi|91774125|ref|YP_566817.1| - 0.065 13.2 0.0 0.078 12.9 0.0 1.1 1 0 0 1 1 1 0 Ribosome recycling factor TIR-like PF10137.9 gi|91774125|ref|YP_566817.1| - 0.09 12.7 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Predicted nucleotide-binding protein containing TIR-like domain Aminotran_1_2 PF00155.21 gi|91774126|ref|YP_566818.1| - 5e-60 203.6 0.0 5.6e-60 203.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|91774126|ref|YP_566818.1| - 1e-10 41.1 0.1 7.7e-09 35.0 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|91774126|ref|YP_566818.1| - 6.4e-10 38.9 0.4 1e-09 38.2 0.4 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|91774126|ref|YP_566818.1| - 2e-08 33.2 0.1 3.2e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.13 gi|91774126|ref|YP_566818.1| - 0.0001 21.3 0.0 0.00035 19.6 0.0 1.7 1 1 0 2 2 2 1 Allinase Aminotran_MocR PF12897.7 gi|91774126|ref|YP_566818.1| - 0.092 11.5 0.0 0.14 11.0 0.0 1.2 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Aminotran_3 PF00202.21 gi|91774127|ref|YP_566819.1| - 1.4e-120 402.7 0.3 1.6e-120 402.5 0.3 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.21 gi|91774127|ref|YP_566819.1| - 0.00015 21.1 0.4 0.00071 18.9 0.4 1.9 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|91774127|ref|YP_566819.1| - 0.00026 20.4 1.4 0.00074 18.9 1.0 2.0 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|91774127|ref|YP_566819.1| - 0.0017 17.6 0.0 0.0039 16.4 0.0 1.6 2 0 0 2 2 2 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|91774127|ref|YP_566819.1| - 0.0032 16.5 0.0 0.012 14.6 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V Bactofilin PF04519.13 gi|91774128|ref|YP_566820.1| - 2.1e-10 40.7 13.5 2.5e-06 27.7 1.6 3.9 2 2 1 3 3 3 3 Polymer-forming cytoskeletal Hexapep PF00132.24 gi|91774128|ref|YP_566820.1| - 0.00046 19.8 4.6 0.013 15.2 0.4 6.5 5 2 2 7 7 7 3 Bacterial transferase hexapeptide (six repeats) DUF2863 PF11062.8 gi|91774128|ref|YP_566820.1| - 0.23 9.8 0.0 0.44 8.9 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2863) TGT_C2 PF14810.6 gi|91774129|ref|YP_566821.1| - 3.1e-29 100.9 0.0 5e-29 100.2 0.0 1.3 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|91774129|ref|YP_566821.1| - 5.8e-14 51.8 0.1 1e-13 51.0 0.1 1.4 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|91774129|ref|YP_566821.1| - 0.0041 17.4 0.0 0.007 16.6 0.0 1.4 1 0 0 1 1 1 1 UPF0113 PUA domain PUA_3 PF17785.1 gi|91774129|ref|YP_566821.1| - 0.0083 15.9 0.2 0.059 13.2 0.1 2.4 2 1 1 3 3 3 1 PUA-like domain Phage_CI_C PF16452.5 gi|91774129|ref|YP_566821.1| - 0.032 14.5 0.0 0.13 12.5 0.0 1.9 1 1 1 2 2 2 0 Bacteriophage CI repressor C-terminal domain MTS_N PF08468.11 gi|91774129|ref|YP_566821.1| - 0.057 13.5 0.0 0.068 13.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain N-terminal Glyco_trans_1_2 PF13524.6 gi|91774129|ref|YP_566821.1| - 0.14 12.6 0.0 0.47 10.9 0.0 1.8 2 1 0 2 2 2 0 Glycosyl transferases group 1 RtcB PF01139.17 gi|91774130|ref|YP_566822.1| - 5e-168 559.6 0.8 5.6e-168 559.4 0.8 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Archease PF01951.16 gi|91774131|ref|YP_566823.1| - 6.5e-44 149.5 3.2 7.2e-44 149.4 3.2 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) TTR-52 PF01060.23 gi|91774131|ref|YP_566823.1| - 0.14 12.9 0.0 0.3 11.8 0.0 1.6 1 0 0 1 1 1 0 Transthyretin-like family CDP-OH_P_transf PF01066.21 gi|91774132|ref|YP_566824.1| - 5.4e-12 46.3 1.7 5.4e-12 46.3 1.7 2.7 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Doppel PF11466.8 gi|91774132|ref|YP_566824.1| - 0.001 18.7 0.8 0.028 14.0 0.1 2.5 2 0 0 2 2 2 1 Prion-like protein Doppel Aldolase_II PF00596.21 gi|91774133|ref|YP_566825.1| - 1.4e-36 126.2 0.0 1.6e-36 126.0 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain DUF982 PF06169.12 gi|91774135|ref|YP_566827.1| - 0.11 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF982) DUF2254 PF10011.9 gi|91774136|ref|YP_566828.1| - 7e-10 38.3 7.0 7e-10 38.3 7.0 1.5 2 0 0 2 2 2 1 Predicted membrane protein (DUF2254) Nrap PF03813.14 gi|91774136|ref|YP_566828.1| - 0.044 13.8 0.1 0.12 12.5 0.1 1.8 2 0 0 2 2 2 0 Nrap protein domain 1 TMEM43 PF07787.12 gi|91774136|ref|YP_566828.1| - 0.49 9.7 3.2 1.1 8.6 3.2 1.5 1 0 0 1 1 1 0 Transmembrane protein 43 DUF1328 PF07043.13 gi|91774138|ref|YP_566830.1| - 6e-14 52.0 16.3 7.4e-14 51.7 16.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1328) SecG PF03840.14 gi|91774138|ref|YP_566830.1| - 2.8 8.1 14.1 0.71 10.0 4.9 2.0 1 1 1 2 2 2 0 Preprotein translocase SecG subunit TraG_N PF07916.11 gi|91774138|ref|YP_566830.1| - 3.1 6.5 7.6 3.3 6.5 7.6 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF202 PF02656.15 gi|91774138|ref|YP_566830.1| - 7 7.2 13.0 97 3.5 13.0 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DDE_Tnp_1 PF01609.21 gi|91774139|ref|YP_566831.1| - 5.2e-09 36.1 1.9 9.3e-09 35.2 0.4 1.8 1 1 1 2 2 2 1 Transposase DDE domain NIR_SIR PF01077.22 gi|91774140|ref|YP_566832.1| - 2.1e-31 108.6 0.2 2.8e-31 108.2 0.2 1.1 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|91774140|ref|YP_566832.1| - 1.5e-18 66.4 0.0 2.9e-18 65.4 0.0 1.4 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4 PF00037.27 gi|91774140|ref|YP_566832.1| - 1.2e-11 43.9 11.3 1.2e-05 24.9 2.0 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|91774140|ref|YP_566832.1| - 5.5e-11 42.1 11.1 8e-06 25.7 2.4 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|91774140|ref|YP_566832.1| - 7.7e-07 29.2 26.0 2.1e-06 27.8 11.9 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91774140|ref|YP_566832.1| - 9.6e-06 26.1 10.4 9.6e-06 26.1 10.4 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|91774140|ref|YP_566832.1| - 0.00011 22.2 19.9 0.00014 21.9 2.2 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91774140|ref|YP_566832.1| - 0.00044 20.2 18.5 0.011 15.8 2.3 3.3 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91774140|ref|YP_566832.1| - 0.00064 19.8 14.2 0.00064 19.8 14.2 3.2 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91774140|ref|YP_566832.1| - 0.0079 16.9 0.4 0.0079 16.9 0.4 3.5 4 0 0 4 4 4 1 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|91774140|ref|YP_566832.1| - 0.0088 16.5 18.4 0.15 12.6 1.6 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91774140|ref|YP_566832.1| - 0.015 16.2 16.9 0.11 13.4 5.9 3.1 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|91774140|ref|YP_566832.1| - 0.016 15.4 8.8 0.039 14.1 8.8 1.7 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|91774140|ref|YP_566832.1| - 0.027 14.9 9.2 0.55 10.7 0.5 2.9 3 0 0 3 3 3 0 4Fe-4S dicluster domain MFS_1 PF07690.16 gi|91774141|ref|YP_566833.1| - 6.4e-47 160.2 53.2 3.2e-45 154.6 39.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|91774141|ref|YP_566833.1| - 1.2e-11 43.8 25.0 1.5e-11 43.4 25.0 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector TRI12 PF06609.13 gi|91774141|ref|YP_566833.1| - 9.1e-05 21.1 6.6 9.1e-05 21.1 6.6 2.8 1 1 1 3 3 3 1 Fungal trichothecene efflux pump (TRI12) OATP PF03137.20 gi|91774141|ref|YP_566833.1| - 0.0011 17.4 15.4 0.052 11.8 10.1 2.6 2 0 0 2 2 2 2 Organic Anion Transporter Polypeptide (OATP) family MFS_1_like PF12832.7 gi|91774141|ref|YP_566833.1| - 0.0054 15.6 26.0 0.25 10.1 26.0 2.1 1 1 0 1 1 1 1 MFS_1 like family DNA_binding_1 PF01035.20 gi|91774142|ref|YP_566834.1| - 1.1e-31 108.8 0.0 1.5e-31 108.3 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 gi|91774142|ref|YP_566834.1| - 0.0076 17.0 0.0 0.013 16.3 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PGF-CTERM PF18204.1 gi|91774143|ref|YP_566835.1| - 1.5e-10 40.7 3.3 4.3e-10 39.2 3.3 1.8 1 0 0 1 1 1 1 PGF-CTERM motif SGP PF17228.2 gi|91774143|ref|YP_566835.1| - 0.00046 21.0 10.6 0.00046 21.0 10.6 1.8 2 0 0 2 2 2 1 Sulphur globule protein DUF5305 PF17231.2 gi|91774143|ref|YP_566835.1| - 0.12 11.8 0.6 0.35 10.2 0.0 2.0 2 1 1 3 3 3 0 Family of unknown function (DUF5305) Trypan_PARP PF05887.11 gi|91774143|ref|YP_566835.1| - 1.9 8.4 5.7 4.1 7.4 5.7 1.6 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF996 PF06195.13 gi|91774144|ref|YP_566836.1| - 0.016 15.5 1.9 0.016 15.5 1.9 3.6 3 1 0 4 4 4 0 Protein of unknown function (DUF996) DUF3278 PF11683.8 gi|91774145|ref|YP_566837.1| - 5.9 7.0 7.9 1.4 9.0 0.1 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3278) Polysacc_synt_C PF14667.6 gi|91774146|ref|YP_566838.1| - 3.8e-20 72.4 72.3 7.3e-16 58.5 23.8 3.9 2 1 2 4 4 4 3 Polysaccharide biosynthesis C-terminal domain Polysacc_synt PF01943.17 gi|91774146|ref|YP_566838.1| - 1e-16 61.2 39.2 1e-16 61.2 39.2 2.8 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|91774146|ref|YP_566838.1| - 1.7e-11 43.9 24.2 1.7e-11 43.9 24.2 2.0 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein MurJ PF03023.14 gi|91774146|ref|YP_566838.1| - 1.3e-08 33.9 42.4 1.3e-08 33.9 42.4 2.3 1 1 1 2 2 2 1 Lipid II flippase MurJ CARDB PF07705.11 gi|91774147|ref|YP_566839.1| - 0.019 15.2 0.4 0.059 13.6 0.4 1.9 1 0 0 1 1 1 0 CARDB DUF961 PF06125.11 gi|91774147|ref|YP_566839.1| - 0.024 15.0 0.1 0.06 13.7 0.1 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF961) FixG_C PF11614.8 gi|91774147|ref|YP_566839.1| - 0.06 13.6 0.4 0.23 11.7 0.4 2.1 1 0 0 1 1 1 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF1573 PF07610.11 gi|91774147|ref|YP_566839.1| - 0.065 13.3 0.4 0.23 11.5 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1573) Glyco_trans_1_2 PF13524.6 gi|91774149|ref|YP_566841.1| - 4e-25 88.0 0.0 7.2e-25 87.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Flavi_NS1 PF00948.21 gi|91774149|ref|YP_566841.1| - 0.055 12.3 0.0 0.093 11.6 0.0 1.3 1 0 0 1 1 1 0 Flavivirus non-structural Protein NS1 Glycos_transf_1 PF00534.20 gi|91774149|ref|YP_566841.1| - 0.13 11.8 0.1 0.48 9.9 0.0 1.9 2 0 0 2 2 2 0 Glycosyl transferases group 1 Glycos_transf_2 PF00535.26 gi|91774150|ref|YP_566842.1| - 5.9e-36 123.8 0.3 8.8e-36 123.3 0.3 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|91774150|ref|YP_566842.1| - 3.9e-18 65.9 0.8 5e-18 65.6 0.8 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|91774150|ref|YP_566842.1| - 9.9e-16 58.3 0.0 1.6e-15 57.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|91774150|ref|YP_566842.1| - 0.00014 22.3 0.1 0.00028 21.3 0.1 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 CobU PF02283.16 gi|91774150|ref|YP_566842.1| - 0.031 13.8 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase NTP_transferase PF00483.23 gi|91774151|ref|YP_566843.1| - 7.6e-56 189.5 0.0 8.3e-56 189.3 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|91774151|ref|YP_566843.1| - 4.8e-13 49.8 0.0 5.4e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|91774151|ref|YP_566843.1| - 0.0078 16.0 0.0 0.22 11.2 0.0 2.1 1 1 1 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 gi|91774151|ref|YP_566843.1| - 0.04 13.8 0.0 0.068 13.1 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase RmlD_sub_bind PF04321.17 gi|91774152|ref|YP_566844.1| - 6.8e-90 301.0 0.0 7.7e-90 300.9 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|91774152|ref|YP_566844.1| - 6e-15 55.4 0.1 1.8e-14 53.8 0.1 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|91774152|ref|YP_566844.1| - 9e-10 38.5 0.0 1.4e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|91774152|ref|YP_566844.1| - 4.3e-08 32.6 2.0 1.7e-07 30.7 0.3 2.6 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|91774152|ref|YP_566844.1| - 4.2e-07 29.2 2.9 7.7e-07 28.4 1.1 2.2 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|91774152|ref|YP_566844.1| - 1.3e-05 24.5 0.2 5.2e-05 22.5 0.1 2.0 2 1 0 2 2 2 1 Male sterility protein GDP_Man_Dehyd PF16363.5 gi|91774153|ref|YP_566845.1| - 9.3e-82 275.1 0.0 1.1e-81 274.9 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|91774153|ref|YP_566845.1| - 9.3e-63 211.9 0.0 1.2e-62 211.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|91774153|ref|YP_566845.1| - 1.8e-23 82.9 0.0 2.8e-23 82.3 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|91774153|ref|YP_566845.1| - 5.5e-20 71.7 0.0 3.7e-19 69.0 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|91774153|ref|YP_566845.1| - 1.4e-17 63.8 0.0 5.3e-16 58.6 0.0 2.3 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 gi|91774153|ref|YP_566845.1| - 3.9e-17 62.3 0.0 2.8e-16 59.5 0.0 1.9 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|91774153|ref|YP_566845.1| - 5.8e-10 39.4 0.0 9e-10 38.7 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|91774153|ref|YP_566845.1| - 0.00036 20.2 0.0 0.00053 19.6 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|91774153|ref|YP_566845.1| - 0.0081 15.6 0.0 0.071 12.6 0.0 2.0 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|91774153|ref|YP_566845.1| - 0.22 11.4 0.0 0.49 10.3 0.0 1.6 1 1 0 1 1 1 0 KR domain dTDP_sugar_isom PF00908.17 gi|91774154|ref|YP_566846.1| - 1.4e-72 242.8 0.0 1.6e-72 242.7 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase GDP_Man_Dehyd PF16363.5 gi|91774155|ref|YP_566847.1| - 1.2e-57 195.9 0.0 5.1e-57 193.8 0.0 1.7 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|91774155|ref|YP_566847.1| - 1.1e-47 162.6 0.0 1.3e-47 162.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|91774155|ref|YP_566847.1| - 8.2e-11 41.4 0.0 1.1e-10 41.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|91774155|ref|YP_566847.1| - 3.2e-09 36.4 0.0 9.7e-05 21.6 0.0 2.1 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|91774155|ref|YP_566847.1| - 6.4e-08 32.0 0.0 8.8e-08 31.6 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|91774155|ref|YP_566847.1| - 2.8e-05 23.4 0.0 0.0047 16.1 0.0 2.3 1 1 0 2 2 2 2 Male sterility protein adh_short PF00106.25 gi|91774155|ref|YP_566847.1| - 0.072 12.5 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase NTP_transferase PF00483.23 gi|91774157|ref|YP_566849.1| - 1.5e-23 83.7 0.0 1.8e-23 83.4 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|91774157|ref|YP_566849.1| - 1.5e-06 28.7 0.0 1.8e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 gi|91774157|ref|YP_566849.1| - 0.0058 15.6 1.3 0.0081 15.1 1.3 1.2 1 0 0 1 1 1 1 L-fucokinase Hexapep PF00132.24 gi|91774157|ref|YP_566849.1| - 0.12 12.1 15.9 0.19 11.5 5.9 3.8 2 2 0 2 2 2 0 Bacterial transferase hexapeptide (six repeats) Bactofilin PF04519.13 gi|91774157|ref|YP_566849.1| - 0.19 12.1 3.7 0.39 11.1 3.7 1.5 1 0 0 1 1 1 0 Polymer-forming cytoskeletal DUF4954 PF16314.5 gi|91774157|ref|YP_566849.1| - 0.82 7.7 6.4 2.5 6.1 6.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4954) Glycos_transf_2 PF00535.26 gi|91774158|ref|YP_566850.1| - 3.9e-28 98.4 0.0 5e-28 98.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|91774158|ref|YP_566850.1| - 1.7e-08 34.6 0.0 2.5e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|91774158|ref|YP_566850.1| - 2.5e-07 30.4 0.1 3.7e-07 29.9 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|91774158|ref|YP_566850.1| - 0.0052 16.3 0.0 0.0084 15.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 DUF3303 PF11746.8 gi|91774160|ref|YP_566852.1| - 2.3e-10 40.6 0.0 2.7e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) DUF3303 PF11746.8 gi|91774161|ref|YP_566853.1| - 5.6e-10 39.4 0.0 6.6e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) GYD PF08734.11 gi|91774161|ref|YP_566853.1| - 0.01 15.8 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 0 GYD domain AUX_IAA PF02309.16 gi|91774161|ref|YP_566853.1| - 0.042 13.7 0.0 0.044 13.6 0.0 1.1 1 0 0 1 1 1 0 AUX/IAA family DUF523 PF04463.12 gi|91774162|ref|YP_566854.1| - 7.9e-32 110.2 0.0 1.2e-31 109.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF523) DUF1722 PF08349.11 gi|91774162|ref|YP_566854.1| - 5.2e-19 68.6 2.1 1.1e-18 67.7 2.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) AAA PF00004.29 gi|91774163|ref|YP_566855.1| - 6.1e-11 42.9 0.0 1.6e-10 41.5 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|91774163|ref|YP_566855.1| - 3.3e-08 33.7 0.0 6.5e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 gi|91774163|ref|YP_566855.1| - 8.6e-08 32.5 0.4 0.0059 16.9 0.0 4.0 3 1 1 4 4 4 1 AAA domain AAA_16 PF13191.6 gi|91774163|ref|YP_566855.1| - 2.1e-05 25.0 0.0 0.00073 20.0 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 gi|91774163|ref|YP_566855.1| - 0.00017 21.4 0.0 0.00052 19.8 0.0 1.8 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_30 PF13604.6 gi|91774163|ref|YP_566855.1| - 0.00021 21.1 1.0 0.00061 19.6 1.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|91774163|ref|YP_566855.1| - 0.0008 19.4 0.0 0.002 18.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|91774163|ref|YP_566855.1| - 0.0021 18.2 0.0 0.0054 16.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|91774163|ref|YP_566855.1| - 0.0036 17.2 0.0 0.038 13.9 0.0 2.3 1 1 1 2 2 2 1 NACHT domain DNA_pol3_delta2 PF13177.6 gi|91774163|ref|YP_566855.1| - 0.0037 17.1 0.2 2.4 7.9 0.0 2.9 2 1 1 3 3 2 1 DNA polymerase III, delta subunit RNA_helicase PF00910.22 gi|91774163|ref|YP_566855.1| - 0.0056 17.1 0.1 0.034 14.5 0.0 2.4 2 0 0 2 2 2 1 RNA helicase AAA_2 PF07724.14 gi|91774163|ref|YP_566855.1| - 0.0075 16.4 0.0 0.02 15.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) IstB_IS21 PF01695.17 gi|91774163|ref|YP_566855.1| - 0.0077 16.0 0.0 0.017 14.8 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_18 PF13238.6 gi|91774163|ref|YP_566855.1| - 0.011 16.3 0.3 0.048 14.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|91774163|ref|YP_566855.1| - 0.013 15.5 0.0 0.036 14.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF815 PF05673.13 gi|91774163|ref|YP_566855.1| - 0.016 14.4 0.0 0.027 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_assoc_2 PF16193.5 gi|91774163|ref|YP_566855.1| - 0.023 15.0 0.0 0.076 13.4 0.0 1.9 1 0 0 1 1 1 0 AAA C-terminal domain AAA_7 PF12775.7 gi|91774163|ref|YP_566855.1| - 0.024 14.2 0.0 0.049 13.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region PPV_E1_C PF00519.17 gi|91774163|ref|YP_566855.1| - 0.037 12.9 0.0 0.057 12.2 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase AAA_25 PF13481.6 gi|91774163|ref|YP_566855.1| - 0.053 13.1 0.6 0.35 10.4 0.1 2.2 1 1 1 2 2 2 0 AAA domain TsaE PF02367.17 gi|91774163|ref|YP_566855.1| - 0.059 13.4 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Cytidylate_kin PF02224.18 gi|91774163|ref|YP_566855.1| - 0.06 13.1 0.0 0.21 11.3 0.0 1.9 2 0 0 2 2 2 0 Cytidylate kinase NB-ARC PF00931.22 gi|91774163|ref|YP_566855.1| - 0.061 12.5 0.0 0.45 9.6 0.0 2.1 2 0 0 2 2 2 0 NB-ARC domain RsgA_GTPase PF03193.16 gi|91774163|ref|YP_566855.1| - 0.066 13.1 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_6 PF12774.7 gi|91774163|ref|YP_566855.1| - 0.085 11.8 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region ABC_tran PF00005.27 gi|91774163|ref|YP_566855.1| - 0.13 12.7 1.2 0.99 9.9 0.0 2.8 2 2 1 3 3 3 0 ABC transporter Hydin_ADK PF17213.3 gi|91774163|ref|YP_566855.1| - 0.36 11.1 2.8 0.73 10.1 0.1 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain PTA_PTB PF01515.19 gi|91774164|ref|YP_566856.1| - 7.3e-05 22.2 0.0 0.092 12.0 0.0 2.2 1 1 1 2 2 2 2 Phosphate acetyl/butaryl transferase MtrH PF02007.18 gi|161611176|ref|YP_566857.2| - 1.5e-121 405.2 0.6 1.7e-121 405.0 0.6 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit ILVD_EDD PF00920.21 gi|91774167|ref|YP_566859.1| - 2.9e-220 732.3 3.5 3.3e-220 732.1 3.5 1.0 1 0 0 1 1 1 1 Dehydratase family Radical_SAM PF04055.21 gi|91774168|ref|YP_566860.1| - 1.3e-13 51.6 0.0 3e-13 50.5 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily PsbU PF06514.11 gi|91774168|ref|YP_566860.1| - 0.0066 16.4 0.1 0.024 14.6 0.1 2.0 1 0 0 1 1 1 1 Photosystem II 12 kDa extrinsic protein (PsbU) LPG_synthase_TM PF03706.13 gi|91774169|ref|YP_566861.1| - 8.4e-43 147.0 9.9 1.3e-42 146.4 9.9 1.3 1 1 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region NTP_transferase PF00483.23 gi|91774170|ref|YP_566862.1| - 1.6e-47 162.2 0.0 2e-47 161.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|91774170|ref|YP_566862.1| - 2.9e-17 61.6 26.0 1.2e-07 31.2 1.7 4.8 1 1 4 5 5 5 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|91774170|ref|YP_566862.1| - 3.5e-08 34.0 0.0 5.1e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|91774170|ref|YP_566862.1| - 1.1e-05 25.1 24.8 0.01 15.6 4.4 4.6 1 1 4 5 5 5 4 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|91774170|ref|YP_566862.1| - 0.18 10.7 2.2 1.1 8.2 2.3 2.0 1 1 0 1 1 1 0 L-fucokinase DUF4954 PF16314.5 gi|91774170|ref|YP_566862.1| - 0.85 7.7 3.9 1.3 7.1 3.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) DDE_Tnp_IS66 PF03050.14 gi|91774171|ref|YP_566863.1| - 3e-60 204.1 1.4 4.5e-59 200.2 0.0 2.7 2 1 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91774171|ref|YP_566863.1| - 8.3e-11 42.1 3.8 2.5e-10 40.6 3.8 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 SlyX PF04102.12 gi|91774171|ref|YP_566863.1| - 5.5e-05 23.7 0.7 0.00016 22.2 0.7 1.8 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91774171|ref|YP_566863.1| - 0.0001 22.6 0.1 0.18 12.0 0.2 2.7 2 0 0 2 2 2 2 DDE domain UPF0242 PF06785.11 gi|91774171|ref|YP_566863.1| - 0.034 14.2 1.0 6.5 6.8 0.4 2.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus BST2 PF16716.5 gi|91774171|ref|YP_566863.1| - 0.054 14.1 1.8 0.26 11.9 1.8 2.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 DUF16 PF01519.16 gi|91774171|ref|YP_566863.1| - 0.068 13.7 0.7 0.27 11.7 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF16 YkyA PF10368.9 gi|91774171|ref|YP_566863.1| - 0.12 12.1 3.0 0.38 10.4 1.0 2.4 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein Zn_Tnp_IS1595 PF12760.7 gi|91774171|ref|YP_566863.1| - 0.12 12.3 2.7 0.79 9.7 0.8 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain GutM PF06923.11 gi|91774171|ref|YP_566863.1| - 0.4 10.8 2.0 4.1 7.6 0.0 2.6 3 0 0 3 3 3 0 Glucitol operon activator protein (GutM) Lar_restr_allev PF14354.6 gi|91774171|ref|YP_566863.1| - 0.48 10.8 7.0 1.1 9.7 5.2 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91774171|ref|YP_566863.1| - 0.91 10.2 8.9 6.7 7.5 1.5 3.5 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LXG PF04740.12 gi|91774171|ref|YP_566863.1| - 1.5 8.5 4.2 5.1 6.7 0.6 2.9 3 0 0 3 3 3 0 LXG domain of WXG superfamily PLATZ PF04640.14 gi|91774171|ref|YP_566863.1| - 1.9 9.1 5.9 0.73 10.5 1.3 2.6 2 1 0 2 2 1 0 PLATZ transcription factor OrfB_IS605 PF01385.19 gi|91774172|ref|YP_566864.1| - 2e-08 34.5 0.1 4.8e-08 33.3 0.1 1.6 1 0 0 1 1 1 1 Probable transposase CBM9_1 PF06452.11 gi|91774172|ref|YP_566864.1| - 0.0035 17.3 1.4 0.01 15.7 0.8 1.9 2 0 0 2 2 2 1 Carbohydrate family 9 binding domain-like NUMOD1 PF07453.13 gi|91774172|ref|YP_566864.1| - 0.022 15.0 0.6 0.13 12.6 0.8 2.2 2 0 0 2 2 2 0 NUMOD1 domain tRNA_anti-codon PF01336.25 gi|91774173|ref|YP_566865.1| - 3.5e-05 23.7 0.1 4.8e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF4131 PF13567.6 gi|91774173|ref|YP_566865.1| - 0.077 12.6 0.0 0.093 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) FKBP_C PF00254.28 gi|91774174|ref|YP_566866.1| - 2.8e-25 88.4 0.0 6.3e-25 87.3 0.0 1.5 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase RNA_bind PF08675.11 gi|91774174|ref|YP_566866.1| - 0.087 12.9 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 RNA binding domain FKBP_C PF00254.28 gi|91774175|ref|YP_566867.1| - 3.5e-22 78.5 0.0 6.4e-22 77.7 0.0 1.4 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase LPAM_1 PF08139.12 gi|91774175|ref|YP_566867.1| - 0.71 10.5 4.5 1.3 9.6 4.5 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF2162 PF09930.9 gi|91774176|ref|YP_566868.1| - 3.5e-69 232.6 26.6 4e-69 232.5 26.6 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) DUF2583 PF10762.9 gi|91774176|ref|YP_566868.1| - 0.11 12.9 0.3 0.11 12.9 0.3 3.2 3 1 1 4 4 4 0 Protein of unknown function (DUF2583) ABC2_membrane_3 PF12698.7 gi|91774176|ref|YP_566868.1| - 0.54 9.3 34.2 0.17 10.9 15.2 2.0 2 0 0 2 2 2 0 ABC-2 family transporter protein MotA_ExbB PF01618.16 gi|91774177|ref|YP_566869.1| - 1.1e-09 38.1 4.6 1.3e-09 37.9 3.8 1.7 1 1 0 1 1 1 1 MotA/TolQ/ExbB proton channel family TMEM169 PF15052.6 gi|91774177|ref|YP_566869.1| - 0.029 14.5 0.6 9.2 6.4 0.0 2.2 2 0 0 2 2 2 0 TMEM169 protein family Semenogelin PF05474.11 gi|91774177|ref|YP_566869.1| - 0.07 11.7 0.3 0.088 11.4 0.3 1.0 1 0 0 1 1 1 0 Semenogelin EMC3_TMCO1 PF01956.16 gi|91774177|ref|YP_566869.1| - 0.093 12.5 0.1 0.24 11.1 0.1 1.8 1 1 1 2 2 2 0 Integral membrane protein EMC3/TMCO1-like SLATT_3 PF18184.1 gi|91774177|ref|YP_566869.1| - 0.16 12.1 1.4 0.53 10.4 0.1 2.0 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 3 DUF2975 PF11188.8 gi|91774177|ref|YP_566869.1| - 0.7 9.8 5.6 0.61 10.0 0.4 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2975) SpoIIM PF01944.17 gi|91774177|ref|YP_566869.1| - 1.6 8.7 7.0 15 5.6 3.2 2.4 2 1 0 2 2 2 0 Stage II sporulation protein M DUF2149 PF09919.9 gi|91774178|ref|YP_566870.1| - 1.2e-34 118.4 0.2 1.5e-34 118.1 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) CobN-Mg_chel PF02514.16 gi|91774179|ref|YP_566871.1| - 3.4e-280 932.4 0.2 6.4e-280 931.5 0.1 1.4 2 0 0 2 2 2 1 CobN/Magnesium Chelatase FrhB_FdhB_C PF04432.13 gi|91774180|ref|YP_566872.1| - 1.5e-34 119.0 0.0 1.5e-34 119.0 0.0 2.0 2 1 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|91774180|ref|YP_566872.1| - 4.8e-25 87.5 0.2 1.5e-24 85.9 0.1 1.9 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term YHS PF04945.13 gi|91774180|ref|YP_566872.1| - 2.3e-11 43.6 2.9 5.7e-11 42.3 2.9 1.7 1 0 0 1 1 1 1 YHS domain Fer4_9 PF13187.6 gi|91774180|ref|YP_566872.1| - 3.4e-05 23.9 17.3 0.0011 19.1 12.8 3.2 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91774180|ref|YP_566872.1| - 3.6e-05 24.0 20.7 0.0093 16.4 2.2 3.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4 PF00037.27 gi|91774180|ref|YP_566872.1| - 6.4e-05 22.6 21.9 0.019 14.8 4.2 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|91774180|ref|YP_566872.1| - 0.00012 22.6 17.1 0.08 13.5 1.6 3.6 2 1 3 5 5 5 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91774180|ref|YP_566872.1| - 0.00021 21.3 19.7 0.00067 19.7 13.4 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91774180|ref|YP_566872.1| - 0.00055 19.9 21.0 0.2 11.8 3.7 3.5 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91774180|ref|YP_566872.1| - 0.00099 19.5 17.4 0.094 13.2 2.7 3.5 2 1 3 5 5 5 4 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91774180|ref|YP_566872.1| - 0.0011 19.2 6.5 0.007 16.5 3.5 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91774180|ref|YP_566872.1| - 0.0069 17.3 11.1 0.44 11.5 1.0 3.5 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|91774180|ref|YP_566872.1| - 0.0073 16.9 19.0 2.3 8.9 15.8 3.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91774180|ref|YP_566872.1| - 0.024 15.4 12.9 0.58 10.9 0.5 3.5 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_6 PF12837.7 gi|91774180|ref|YP_566872.1| - 0.053 13.6 20.1 0.19 11.8 2.5 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|91774180|ref|YP_566872.1| - 0.15 12.6 0.5 0.15 12.6 0.5 3.5 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_21 PF14697.6 gi|91774180|ref|YP_566872.1| - 0.78 9.9 17.6 0.74 10.0 12.6 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain TrmB PF01978.19 gi|91774181|ref|YP_566873.1| - 0.00023 21.0 0.1 0.00037 20.3 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB RE_Bsp6I PF09504.10 gi|91774181|ref|YP_566873.1| - 0.046 13.3 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 Bsp6I restriction endonuclease Aconitase PF00330.20 gi|91774182|ref|YP_566874.1| - 1.8e-96 323.9 5.3 5.1e-94 315.9 5.3 2.7 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|91774182|ref|YP_566874.1| - 0.033 12.9 0.0 0.051 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) DUF5388 PF17363.2 gi|91774183|ref|YP_566875.1| - 0.039 14.2 0.0 11 6.4 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5388) Death PF00531.22 gi|91774183|ref|YP_566875.1| - 0.057 13.6 0.1 0.073 13.2 0.1 1.2 1 0 0 1 1 1 0 Death domain HTH_Tnp_ISL3 PF13542.6 gi|91774183|ref|YP_566875.1| - 0.13 11.6 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 DUF111 PF01969.17 gi|91774184|ref|YP_566876.1| - 2.6e-129 431.6 2.9 3e-129 431.4 2.9 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 WcbI PF18588.1 gi|91774184|ref|YP_566876.1| - 0.039 13.6 0.0 0.21 11.2 0.0 2.2 3 0 0 3 3 3 0 Polysaccharide biosynthesis enzyme WcbI Zeta_toxin PF06414.12 gi|91774184|ref|YP_566876.1| - 0.042 13.1 0.1 0.076 12.3 0.1 1.3 1 0 0 1 1 1 0 Zeta toxin KH_2 PF07650.17 gi|91774184|ref|YP_566876.1| - 0.55 10.1 4.9 7.4 6.5 0.4 3.1 3 0 0 3 3 3 0 KH domain AIRC PF00731.20 gi|91774185|ref|YP_566877.1| - 1.4e-18 66.8 4.0 2.1e-18 66.3 4.0 1.3 1 0 0 1 1 1 1 AIR carboxylase Peripla_BP_1 PF00532.21 gi|91774185|ref|YP_566877.1| - 0.082 12.3 0.0 1.4 8.3 0.0 2.1 2 0 0 2 2 2 0 Periplasmic binding proteins and sugar binding domain of LacI family La_HTH_kDCL PF18177.1 gi|91774185|ref|YP_566877.1| - 0.18 12.1 0.0 0.33 11.3 0.0 1.4 1 0 0 1 1 1 0 La HTH in kinetoplastid DICER domain TPR_10 PF13374.6 gi|91774186|ref|YP_566878.1| - 8.6e-25 85.9 13.4 2.6e-06 27.1 0.4 8.7 9 0 0 9 9 8 6 Tetratricopeptide repeat TPR_12 PF13424.6 gi|91774186|ref|YP_566878.1| - 4.5e-20 71.7 27.3 7.3e-09 35.8 0.9 12.2 10 2 1 11 11 11 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|91774186|ref|YP_566878.1| - 1.1e-12 47.0 4.6 0.0043 17.0 0.1 8.4 9 0 0 9 9 7 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|91774186|ref|YP_566878.1| - 1.2e-10 40.7 24.4 0.42 10.8 0.3 12.4 11 2 2 13 13 12 2 Tetratricopeptide repeat TPR_17 PF13431.6 gi|91774186|ref|YP_566878.1| - 1.8e-09 37.3 15.3 0.32 11.5 0.0 14.0 17 0 0 17 17 13 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|91774186|ref|YP_566878.1| - 1.8e-08 34.5 18.2 10 7.3 0.0 13.1 13 2 2 15 15 12 0 Tetratricopeptide repeat TPR_1 PF00515.28 gi|91774186|ref|YP_566878.1| - 8e-07 28.6 14.0 0.049 13.5 0.3 8.4 10 0 0 10 10 10 2 Tetratricopeptide repeat MIT PF04212.18 gi|91774186|ref|YP_566878.1| - 1e-05 25.5 9.2 6.1 7.0 0.0 8.3 8 1 1 9 9 9 1 MIT (microtubule interacting and transport) domain TPR_11 PF13414.6 gi|91774186|ref|YP_566878.1| - 2.9e-05 23.7 13.8 9.1 6.1 0.0 10.6 11 0 0 11 11 11 0 TPR repeat TPR_8 PF13181.6 gi|91774186|ref|YP_566878.1| - 5e-05 23.2 28.3 0.025 14.8 0.3 11.4 15 0 0 15 15 13 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|91774186|ref|YP_566878.1| - 0.00037 21.0 12.0 12 6.8 0.1 8.9 8 0 0 8 8 7 0 Tetratricopeptide repeat TPR_21 PF09976.9 gi|91774186|ref|YP_566878.1| - 0.00051 19.8 6.6 6.3 6.5 0.0 6.9 8 1 2 10 10 10 1 Tetratricopeptide repeat-like domain TPR_19 PF14559.6 gi|91774186|ref|YP_566878.1| - 0.0041 17.6 27.3 4.9 7.7 2.1 11.2 11 2 2 13 13 13 1 Tetratricopeptide repeat DUF2225 PF09986.9 gi|91774186|ref|YP_566878.1| - 0.014 15.1 1.6 0.27 10.9 0.2 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) 3HCDH_RFF PF18321.1 gi|91774186|ref|YP_566878.1| - 0.12 12.8 0.3 15 6.1 0.0 3.3 3 0 0 3 3 2 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain TOM20_plant PF06552.12 gi|91774186|ref|YP_566878.1| - 0.15 11.8 1.0 0.8 9.4 0.2 2.7 2 1 0 2 2 2 0 Plant specific mitochondrial import receptor subunit TOM20 FANCI_S4 PF14678.6 gi|91774186|ref|YP_566878.1| - 0.18 10.9 12.9 6.4 5.8 0.1 6.6 6 1 1 7 7 7 0 FANCI solenoid 4 SesA PF17107.5 gi|91774186|ref|YP_566878.1| - 0.34 11.1 3.3 45 4.3 0.0 5.4 6 0 0 6 6 6 0 N-terminal domain on NACHT_NTPase and P-loop NTPases PEP-utilisers_N PF05524.13 gi|91774186|ref|YP_566878.1| - 0.81 9.9 3.0 2.4 8.3 0.2 3.4 4 0 0 4 4 3 0 PEP-utilising enzyme, N-terminal UTP15_C PF09384.10 gi|91774186|ref|YP_566878.1| - 8.5 6.0 12.6 0.75 9.5 0.4 5.0 6 1 0 6 6 6 0 UTP15 C terminal Peptidase_U32 PF01136.19 gi|91774187|ref|YP_566879.1| - 1.5e-89 299.2 0.1 7.1e-77 257.7 0.0 2.5 2 1 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.8 gi|91774187|ref|YP_566879.1| - 2.5e-22 79.5 0.1 5.5e-22 78.4 0.1 1.6 1 0 0 1 1 1 1 Collagenase DeoC PF01791.9 gi|91774187|ref|YP_566879.1| - 0.035 13.7 0.1 4.4 6.8 0.0 3.1 3 0 0 3 3 3 0 DeoC/LacD family aldolase DUF2190 PF09956.9 gi|91774187|ref|YP_566879.1| - 0.068 13.7 1.3 0.11 13.0 0.1 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2190) Maf PF02545.14 gi|91774188|ref|YP_566880.1| - 3e-51 173.6 0.0 3.3e-51 173.4 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein NTP_transf_9 PF04248.12 gi|91774189|ref|YP_566881.1| - 5.4e-32 109.6 0.1 6e-32 109.4 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF427) zf-CDGSH PF09360.10 gi|91774190|ref|YP_566882.1| - 1.5e-31 108.4 5.0 3.9e-15 55.8 0.3 2.6 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 gi|91774190|ref|YP_566882.1| - 1.5e-27 95.4 0.1 3.2e-27 94.4 0.1 1.6 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster MS_channel PF00924.18 gi|91774191|ref|YP_566883.1| - 7.6e-49 166.1 0.1 1.1e-48 165.6 0.1 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel TM_helix PF05552.12 gi|91774191|ref|YP_566883.1| - 0.00059 19.8 3.7 0.00059 19.8 3.7 2.5 2 1 1 3 3 3 1 Conserved TM helix TssN PF17555.2 gi|91774191|ref|YP_566883.1| - 0.26 10.6 2.8 0.38 10.1 2.8 1.3 1 0 0 1 1 1 0 Type VI secretion system, TssN ABC2_membrane_5 PF13346.6 gi|91774191|ref|YP_566883.1| - 0.27 10.8 8.3 0.38 10.3 8.3 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein FtsX PF02687.21 gi|91774191|ref|YP_566883.1| - 10 6.7 14.3 0.85 10.1 6.1 2.2 1 1 1 2 2 2 0 FtsX-like permease family MarR PF01047.22 gi|91774192|ref|YP_566884.1| - 1.4e-11 44.1 0.1 2.3e-11 43.4 0.1 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|91774192|ref|YP_566884.1| - 7.2e-09 35.4 0.0 1.2e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|91774192|ref|YP_566884.1| - 4.5e-08 33.5 0.1 8.8e-08 32.5 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|91774192|ref|YP_566884.1| - 0.00057 20.0 0.0 0.0012 19.0 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain FtsK_gamma PF09397.10 gi|91774192|ref|YP_566884.1| - 0.0012 18.5 0.0 0.0037 17.0 0.0 1.8 2 0 0 2 2 2 1 Ftsk gamma domain HTH_IclR PF09339.10 gi|91774192|ref|YP_566884.1| - 0.0013 18.4 0.0 0.0026 17.5 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_34 PF13601.6 gi|91774192|ref|YP_566884.1| - 0.0025 18.0 0.0 0.0043 17.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain B-block_TFIIIC PF04182.12 gi|91774192|ref|YP_566884.1| - 0.0045 17.1 0.0 0.0076 16.4 0.0 1.4 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC TrmB PF01978.19 gi|91774192|ref|YP_566884.1| - 0.03 14.2 0.0 0.064 13.2 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.9 gi|91774192|ref|YP_566884.1| - 0.062 13.4 0.2 0.13 12.4 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) TFIIE_alpha PF02002.17 gi|91774192|ref|YP_566884.1| - 0.081 12.8 0.5 0.23 11.4 0.1 2.0 1 1 1 2 2 2 0 TFIIE alpha subunit GAD PF02938.14 gi|91774192|ref|YP_566884.1| - 0.13 12.5 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 GAD domain MMPL PF03176.15 gi|91774193|ref|YP_566885.1| - 1.2e-56 192.1 25.8 2.1e-29 102.6 3.9 2.5 3 0 0 3 3 3 2 MMPL family Sterol-sensing PF12349.8 gi|91774193|ref|YP_566885.1| - 2.8e-13 50.0 10.5 8e-08 32.3 0.9 3.0 4 0 0 4 4 4 2 Sterol-sensing domain of SREBP cleavage-activation ACR_tran PF00873.19 gi|91774193|ref|YP_566885.1| - 3.8e-11 41.4 24.7 8.5e-10 37.0 9.4 2.3 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family Patched PF02460.18 gi|91774193|ref|YP_566885.1| - 2.8e-10 39.0 24.8 3.2e-08 32.2 1.5 3.0 3 0 0 3 3 3 2 Patched family SecD_SecF PF02355.16 gi|91774193|ref|YP_566885.1| - 4.8e-10 39.1 11.2 4.8e-10 39.1 11.2 2.5 2 0 0 2 2 2 1 Protein export membrane protein Fzo_mitofusin PF04799.13 gi|91774193|ref|YP_566885.1| - 0.46 10.0 3.1 0.9 9.1 3.1 1.4 1 0 0 1 1 1 0 fzo-like conserved region Lectin_N PF03954.14 gi|91774193|ref|YP_566885.1| - 2.2 8.0 6.1 3.7 7.3 0.1 2.9 3 0 0 3 3 3 0 Hepatic lectin, N-terminal domain CARDB PF07705.11 gi|91774194|ref|YP_566886.1| - 0.0018 18.5 1.2 0.02 15.2 0.8 2.3 2 1 0 2 2 2 1 CARDB NPCBM_assoc PF10633.9 gi|91774194|ref|YP_566886.1| - 0.0045 17.2 0.4 4.3 7.7 0.0 3.3 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase ASH PF15780.5 gi|91774194|ref|YP_566886.1| - 0.062 13.5 0.1 0.63 10.3 0.0 2.5 2 0 0 2 2 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF11 PF01345.18 gi|91774194|ref|YP_566886.1| - 0.086 13.2 1.1 2.2 8.6 1.0 2.9 3 1 0 3 3 3 0 Domain of unknown function DUF11 NPCBM_assoc PF10633.9 gi|91774195|ref|YP_566887.1| - 0.0023 18.1 0.7 2.2 8.6 0.0 3.3 4 0 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DOCK-C2 PF14429.6 gi|91774195|ref|YP_566887.1| - 0.13 12.1 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 C2 domain in Dock180 and Zizimin proteins CARDB PF07705.11 gi|91774195|ref|YP_566887.1| - 0.23 11.7 3.2 0.49 10.7 0.1 2.9 2 1 0 2 2 2 0 CARDB eIF2_C PF09173.11 gi|91774196|ref|YP_566888.1| - 2.9e-32 110.7 0.4 8.7e-32 109.2 0.4 1.9 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU PF00009.27 gi|91774196|ref|YP_566888.1| - 8.8e-32 110.2 3.1 7.5e-31 107.2 3.1 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|91774196|ref|YP_566888.1| - 9.9e-07 29.1 0.2 4.1e-06 27.1 0.2 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RsgA_GTPase PF03193.16 gi|91774196|ref|YP_566888.1| - 3.9e-05 23.6 0.9 0.00053 19.9 0.2 2.3 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|91774196|ref|YP_566888.1| - 0.00032 20.8 0.0 0.00095 19.2 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase MMR_HSR1_Xtn PF16897.5 gi|91774196|ref|YP_566888.1| - 0.002 18.1 0.1 0.004 17.1 0.1 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain PolC_DP2 PF03833.13 gi|91774196|ref|YP_566888.1| - 0.0023 15.9 0.2 0.0031 15.5 0.2 1.1 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 PduV-EutP PF10662.9 gi|91774196|ref|YP_566888.1| - 0.019 14.7 2.8 3.4 7.4 0.7 2.6 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation DZR PF12773.7 gi|91774196|ref|YP_566888.1| - 0.033 14.2 0.5 0.063 13.3 0.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon cobW PF02492.19 gi|91774196|ref|YP_566888.1| - 0.072 12.7 0.4 0.8 9.3 0.1 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain FeoB_N PF02421.18 gi|91774196|ref|YP_566888.1| - 0.076 12.5 1.3 12 5.4 0.0 2.7 2 1 0 2 2 2 0 Ferrous iron transport protein B zf-ZPR1 PF03367.13 gi|91774196|ref|YP_566888.1| - 0.22 11.4 2.2 0.65 9.8 0.2 2.6 3 0 0 3 3 3 0 ZPR1 zinc-finger domain zinc_ribbon_2 PF13240.6 gi|91774196|ref|YP_566888.1| - 2.7 7.8 4.7 9.1 6.2 4.7 1.9 1 1 0 1 1 1 0 zinc-ribbon domain PIN_9 PF18477.1 gi|91774197|ref|YP_566889.1| - 1.1e-42 145.0 0.3 1.2e-42 144.9 0.3 1.0 1 0 0 1 1 1 1 PIN like domain PIN_5 PF08745.11 gi|91774197|ref|YP_566889.1| - 0.0049 16.3 1.8 0.39 10.1 1.3 2.1 1 1 1 2 2 2 2 PINc domain ribonuclease DUF5615 PF18480.1 gi|91774197|ref|YP_566889.1| - 0.045 13.5 0.3 0.12 12.2 0.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF5615) RNase_Zc3h12a PF11977.8 gi|91774197|ref|YP_566889.1| - 0.13 12.1 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain SHS2_Rpb7-N PF03876.17 gi|91774198|ref|YP_566890.1| - 2.8e-20 72.5 0.2 4.9e-20 71.7 0.2 1.4 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|91774198|ref|YP_566890.1| - 2.1e-12 47.2 0.2 4.8e-12 46.1 0.2 1.6 1 0 0 1 1 1 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.12 gi|91774198|ref|YP_566890.1| - 0.0099 16.1 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase III subunit Rpc25 Spt4 PF06093.13 gi|91774199|ref|YP_566891.1| - 3.2e-13 49.6 0.3 3.7e-13 49.4 0.3 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger Prok-RING_4 PF14447.6 gi|91774199|ref|YP_566891.1| - 0.01 15.7 1.8 0.014 15.2 1.8 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Laminin_EGF PF00053.24 gi|91774199|ref|YP_566891.1| - 0.022 14.9 0.5 0.029 14.5 0.5 1.1 1 0 0 1 1 1 0 Laminin EGF domain RecR PF02132.15 gi|91774199|ref|YP_566891.1| - 0.048 13.2 2.8 0.073 12.7 2.8 1.3 1 0 0 1 1 1 0 RecR protein zf-ribbon_3 PF13248.6 gi|91774199|ref|YP_566891.1| - 0.082 12.3 2.9 0.15 11.5 0.3 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-RRN7 PF11781.8 gi|91774199|ref|YP_566891.1| - 7.9 6.3 8.0 8.6 6.1 0.5 2.2 1 1 1 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF359 PF04019.12 gi|91774200|ref|YP_566892.1| - 8.2e-43 145.0 0.0 1.1e-42 144.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) MAF_flag10 PF01973.18 gi|91774200|ref|YP_566892.1| - 0.057 13.1 0.1 0.08 12.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF115 RNase_P_pop3 PF08228.11 gi|91774200|ref|YP_566892.1| - 0.078 13.0 0.1 0.14 12.2 0.1 1.5 1 0 0 1 1 1 0 RNase P subunit Pop3 Ribosomal_S24e PF01282.19 gi|91774201|ref|YP_566893.1| - 1.3e-24 86.0 0.0 1.7e-24 85.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e Ribosomal_S27 PF01599.19 gi|91774202|ref|YP_566894.1| - 8.8e-21 73.8 3.4 9.7e-21 73.7 3.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S27a Nudix_N_2 PF14803.6 gi|91774202|ref|YP_566894.1| - 8.9e-05 22.3 5.2 0.00033 20.5 4.1 2.1 1 1 1 2 2 2 2 Nudix N-terminal Ribosomal_L37e PF01907.19 gi|91774202|ref|YP_566894.1| - 0.00025 21.1 0.8 0.00029 20.9 0.8 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e RNA_POL_M_15KD PF02150.16 gi|91774202|ref|YP_566894.1| - 0.00025 20.8 1.2 0.00043 20.1 1.2 1.3 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit IBR PF01485.21 gi|91774202|ref|YP_566894.1| - 0.0047 17.1 0.1 0.005 17.0 0.1 1.1 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain zf-NADH-PPase PF09297.11 gi|91774202|ref|YP_566894.1| - 0.0048 16.5 3.5 0.038 13.7 0.2 2.2 2 0 0 2 2 2 1 NADH pyrophosphatase zinc ribbon domain MqsA_antitoxin PF15731.5 gi|91774202|ref|YP_566894.1| - 0.0053 16.9 0.2 0.0057 16.8 0.2 1.2 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA Zn_Tnp_IS1595 PF12760.7 gi|91774202|ref|YP_566894.1| - 0.0071 16.3 0.7 0.009 16.0 0.7 1.4 1 0 0 1 1 1 1 Transposase zinc-ribbon domain DZR PF12773.7 gi|91774202|ref|YP_566894.1| - 0.0077 16.2 1.2 0.013 15.5 1.2 1.3 1 1 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|91774202|ref|YP_566894.1| - 0.0079 15.6 1.2 0.65 9.5 0.0 2.1 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|91774202|ref|YP_566894.1| - 0.013 15.2 4.2 0.31 10.8 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|91774202|ref|YP_566894.1| - 0.014 15.3 1.1 0.018 15.0 1.1 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain GFA PF04828.14 gi|91774202|ref|YP_566894.1| - 0.014 15.7 0.7 0.091 13.1 0.0 1.9 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme DUF1451 PF07295.11 gi|91774202|ref|YP_566894.1| - 0.015 15.3 0.4 0.016 15.3 0.4 1.0 1 0 0 1 1 1 0 Zinc-ribbon containing domain HypA PF01155.19 gi|91774202|ref|YP_566894.1| - 0.036 14.1 0.2 0.037 14.1 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_11 PF11682.8 gi|91774202|ref|YP_566894.1| - 0.07 13.1 0.9 0.086 12.9 0.1 1.6 1 1 1 2 2 2 0 Probable zinc-ribbon zinc_ribbon_13 PF09855.9 gi|91774202|ref|YP_566894.1| - 0.084 13.0 2.8 0.38 11.0 0.6 2.1 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) NOB1_Zn_bind PF08772.11 gi|91774202|ref|YP_566894.1| - 0.099 12.8 4.8 0.38 10.9 0.4 2.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like TF_Zn_Ribbon PF08271.12 gi|91774202|ref|YP_566894.1| - 0.1 12.1 3.4 0.17 11.4 3.4 1.4 1 1 0 1 1 1 0 TFIIB zinc-binding zf_UBZ PF18439.1 gi|91774202|ref|YP_566894.1| - 1.3 8.7 4.7 2 8.1 0.3 2.2 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger Response_reg PF00072.24 gi|91774203|ref|YP_566895.1| - 8.4e-24 83.9 0.1 9.7e-24 83.7 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain HisKA_2 PF07568.12 gi|91774204|ref|YP_566896.1| - 1.3e-29 102.0 1.7 1.3e-29 102.0 1.7 2.3 2 0 0 2 2 2 1 Histidine kinase dCache_1 PF02743.18 gi|91774204|ref|YP_566896.1| - 3.4e-24 86.0 4.2 1.3e-23 84.1 4.2 2.0 1 0 0 1 1 1 1 Cache domain PAS_3 PF08447.12 gi|91774204|ref|YP_566896.1| - 2.8e-17 62.8 0.0 6.4e-17 61.6 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|91774204|ref|YP_566896.1| - 2.2e-10 41.0 1.7 4.2e-10 40.1 0.5 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|91774204|ref|YP_566896.1| - 5.9e-06 26.6 0.1 0.00028 21.2 0.0 2.9 3 0 0 3 3 3 1 HAMP domain PAS PF00989.25 gi|91774204|ref|YP_566896.1| - 1.6e-05 24.9 0.0 7e-05 22.8 0.0 2.1 2 0 0 2 2 2 1 PAS fold Cache_3-Cache_2 PF17201.4 gi|91774204|ref|YP_566896.1| - 0.00034 20.0 0.1 0.00087 18.7 0.1 1.7 1 0 0 1 1 1 1 Cache 3/Cache 2 fusion domain HWE_HK PF07536.14 gi|91774204|ref|YP_566896.1| - 0.00079 20.1 0.0 0.0023 18.6 0.0 1.8 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|91774204|ref|YP_566896.1| - 0.013 15.5 0.0 0.028 14.4 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain PAS_9 PF13426.7 gi|91774204|ref|YP_566896.1| - 0.032 14.5 0.2 2.2 8.5 0.0 3.4 3 0 0 3 3 3 0 PAS domain DUF1869 PF08956.10 gi|91774204|ref|YP_566896.1| - 0.034 14.1 0.1 0.1 12.5 0.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1869) HATPase_c_3 PF13589.6 gi|91774204|ref|YP_566896.1| - 0.11 12.3 0.3 0.3 10.9 0.3 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1724 PF08350.10 gi|91774205|ref|YP_566897.1| - 5.7e-24 84.0 0.6 5.7e-24 84.0 0.6 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|91774205|ref|YP_566897.1| - 0.015 15.2 0.2 0.032 14.1 0.2 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HxlR PF01638.17 gi|91774205|ref|YP_566897.1| - 0.033 14.0 0.2 0.5 10.2 0.3 2.5 1 1 1 2 2 2 0 HxlR-like helix-turn-helix Pro_sub2 PF18513.1 gi|91774205|ref|YP_566897.1| - 0.16 12.1 2.7 5.9 7.1 0.1 2.8 3 0 0 3 3 3 0 Prodomain subtilisin 2 B12-binding PF02310.19 gi|91774206|ref|YP_566898.1| - 2.3e-27 95.4 0.2 2.9e-27 95.1 0.2 1.1 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|91774206|ref|YP_566898.1| - 4.7e-10 39.8 1.4 2.3e-09 37.6 0.4 2.3 2 1 0 2 2 2 1 B12 binding domain AA_permease_2 PF13520.6 gi|91774207|ref|YP_566899.1| - 2.1e-73 247.6 47.4 2.6e-73 247.3 47.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|91774207|ref|YP_566899.1| - 3.8e-10 39.0 39.4 6.3e-10 38.2 39.4 1.4 1 1 0 1 1 1 1 Amino acid permease PAS_3 PF08447.12 gi|91774208|ref|YP_566900.1| - 4.3e-16 59.0 0.1 6.7e-16 58.4 0.1 1.3 1 0 0 1 1 1 1 PAS fold GAF_2 PF13185.6 gi|91774208|ref|YP_566900.1| - 6.5e-06 26.5 0.0 1e-05 25.8 0.0 1.3 1 0 0 1 1 1 1 GAF domain PAS_9 PF13426.7 gi|91774208|ref|YP_566900.1| - 0.00018 21.7 0.0 0.0003 21.0 0.0 1.4 1 0 0 1 1 1 1 PAS domain Response_reg PF00072.24 gi|91774209|ref|YP_566901.1| - 1.1e-18 67.4 0.2 1.3e-18 67.2 0.2 1.0 1 0 0 1 1 1 1 Response regulator receiver domain SIS PF01380.22 gi|91774209|ref|YP_566901.1| - 0.068 13.0 0.0 0.086 12.7 0.0 1.1 1 0 0 1 1 1 0 SIS domain DUF2798 PF11391.8 gi|91774210|ref|YP_566902.1| - 0.1 12.6 0.6 0.1 12.6 0.6 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2798) MazE_antitoxin PF04014.18 gi|91774211|ref|YP_566903.1| - 0.00044 20.1 0.1 0.00084 19.2 0.0 1.5 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin MraZ PF02381.18 gi|91774211|ref|YP_566903.1| - 0.0042 17.1 0.0 0.0052 16.7 0.0 1.2 1 0 0 1 1 1 1 MraZ protein, putative antitoxin-like DDE_Tnp_IS66 PF03050.14 gi|91774212|ref|YP_566904.1| - 1.9e-67 227.7 0.4 6.3e-67 226.0 0.0 1.8 2 0 0 2 2 2 1 Transposase IS66 family zf-IS66 PF13005.7 gi|91774212|ref|YP_566904.1| - 9e-11 42.0 3.8 2.7e-10 40.5 3.8 1.9 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 SlyX PF04102.12 gi|91774212|ref|YP_566904.1| - 5.2e-05 23.8 0.7 0.00014 22.4 0.7 1.7 1 0 0 1 1 1 1 SlyX DDE_Tnp_IS240 PF13610.6 gi|91774212|ref|YP_566904.1| - 0.00011 22.5 0.3 0.17 12.1 0.2 2.8 3 0 0 3 3 3 2 DDE domain BST2 PF16716.5 gi|91774212|ref|YP_566904.1| - 0.067 13.8 1.4 0.3 11.7 1.4 2.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Zn_Tnp_IS1595 PF12760.7 gi|91774212|ref|YP_566904.1| - 0.14 12.2 2.7 0.83 9.7 0.8 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF16 PF01519.16 gi|91774212|ref|YP_566904.1| - 0.14 12.7 2.6 0.55 10.7 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF16 Lar_restr_allev PF14354.6 gi|91774212|ref|YP_566904.1| - 0.36 11.2 6.9 0.52 10.7 4.5 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|91774212|ref|YP_566904.1| - 1 10.1 8.9 7.1 7.4 1.5 3.6 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PLATZ PF04640.14 gi|91774212|ref|YP_566904.1| - 2.1 9.0 6.0 0.65 10.7 1.1 2.7 2 1 0 2 2 2 0 PLATZ transcription factor PemK_toxin PF02452.17 gi|91774213|ref|YP_566905.1| - 2.1e-09 37.8 0.0 2.3e-09 37.6 0.0 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system Phage_integrase PF00589.22 gi|91774214|ref|YP_566906.1| - 2.1e-17 63.5 0.0 3.5e-17 62.7 0.0 1.3 1 0 0 1 1 1 1 Phage integrase family zf-ribbon_3 PF13248.6 gi|91774214|ref|YP_566906.1| - 3.1e-05 23.2 0.5 6.5e-05 22.2 0.5 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|91774214|ref|YP_566906.1| - 0.00043 20.3 0.2 0.00094 19.2 0.2 1.5 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|91774214|ref|YP_566906.1| - 0.0014 18.3 3.6 0.0029 17.3 3.6 1.5 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|91774214|ref|YP_566906.1| - 0.0097 16.6 1.0 0.0097 16.6 1.0 2.1 2 0 0 2 2 2 1 zinc-ribbon family DUF3435 PF11917.8 gi|91774214|ref|YP_566906.1| - 0.046 12.7 0.0 0.079 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) AAA PF00004.29 gi|91774215|ref|YP_566907.1| - 5e-43 146.7 0.2 1.8e-42 144.9 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|91774215|ref|YP_566907.1| - 2.2e-13 49.7 0.1 8.6e-13 47.9 0.1 2.0 2 0 0 2 2 2 1 AAA+ lid domain AAA_2 PF07724.14 gi|91774215|ref|YP_566907.1| - 8.5e-05 22.7 0.0 0.00037 20.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|91774215|ref|YP_566907.1| - 0.00011 22.0 0.1 0.00056 19.7 0.0 2.2 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|91774215|ref|YP_566907.1| - 0.0002 21.3 0.0 0.00083 19.4 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|91774215|ref|YP_566907.1| - 0.00049 20.5 0.1 0.027 14.8 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|91774215|ref|YP_566907.1| - 0.0031 17.8 0.1 0.34 11.2 0.1 2.5 1 1 1 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|91774215|ref|YP_566907.1| - 0.0053 17.1 0.0 0.046 14.1 0.0 2.2 2 0 0 2 2 2 1 RNA helicase ATPase PF06745.13 gi|91774215|ref|YP_566907.1| - 0.0093 15.3 0.7 0.055 12.8 0.0 2.4 3 0 0 3 3 3 1 KaiC Sigma54_activat PF00158.26 gi|91774215|ref|YP_566907.1| - 0.014 15.1 0.0 0.094 12.4 0.0 2.3 3 0 0 3 3 3 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|91774215|ref|YP_566907.1| - 0.015 14.7 0.1 0.033 13.6 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|91774215|ref|YP_566907.1| - 0.025 14.7 0.0 0.053 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|91774215|ref|YP_566907.1| - 0.032 13.4 0.0 0.06 12.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_14 PF13173.6 gi|91774215|ref|YP_566907.1| - 0.035 14.1 0.0 0.11 12.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_3 PF07726.11 gi|91774215|ref|YP_566907.1| - 0.043 13.7 0.0 0.09 12.6 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 gi|91774215|ref|YP_566907.1| - 0.044 13.0 0.0 0.078 12.2 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin IstB_IS21 PF01695.17 gi|91774215|ref|YP_566907.1| - 0.072 12.8 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 gi|91774215|ref|YP_566907.1| - 0.074 12.3 0.0 0.15 11.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_24 PF13479.6 gi|91774215|ref|YP_566907.1| - 0.11 12.2 0.0 0.3 10.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|91774215|ref|YP_566907.1| - 0.13 12.8 0.3 0.8 10.3 0.0 2.3 3 0 0 3 3 3 0 AAA domain AAA_17 PF13207.6 gi|91774215|ref|YP_566907.1| - 0.4 11.1 2.3 2 8.8 0.0 2.8 3 0 0 3 3 3 0 AAA domain Penicillinase_R PF03965.16 gi|91774216|ref|YP_566908.1| - 0.0011 19.3 0.3 0.0024 18.2 0.3 1.5 1 0 0 1 1 1 1 Penicillinase repressor UvrB_inter PF17757.1 gi|91774217|ref|YP_566909.1| - 4.2e-30 103.8 0.1 1.4e-29 102.1 0.1 2.0 1 0 0 1 1 1 1 UvrB interaction domain UvrB PF12344.8 gi|91774217|ref|YP_566909.1| - 7.9e-20 70.4 0.0 2e-19 69.2 0.0 1.7 1 0 0 1 1 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|91774217|ref|YP_566909.1| - 5.9e-18 65.2 0.1 1.8e-17 63.6 0.1 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|91774217|ref|YP_566909.1| - 5.7e-13 49.2 0.0 6.6e-12 45.8 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit UVR PF02151.19 gi|91774217|ref|YP_566909.1| - 4.8e-09 35.7 3.0 4.8e-09 35.7 3.0 2.3 2 0 0 2 2 2 1 UvrB/uvrC motif DEAD PF00270.29 gi|91774217|ref|YP_566909.1| - 0.00014 21.7 0.1 0.0037 17.1 0.0 3.0 3 1 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|91774217|ref|YP_566909.1| - 0.0011 18.7 0.0 0.046 13.4 0.0 2.8 3 0 0 3 3 3 1 AAA domain AAA_19 PF13245.6 gi|91774217|ref|YP_566909.1| - 0.02 15.2 0.1 6.1 7.2 0.0 2.9 2 1 0 2 2 2 0 AAA domain DUF87 PF01935.17 gi|91774217|ref|YP_566909.1| - 0.069 13.2 1.2 0.14 12.2 0.1 1.9 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_7 PF12775.7 gi|91774217|ref|YP_566909.1| - 0.11 12.0 0.1 0.19 11.2 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA PF00004.29 gi|91774217|ref|YP_566909.1| - 0.12 12.8 0.2 2 8.8 0.0 3.1 4 0 0 4 4 3 0 ATPase family associated with various cellular activities (AAA) Kinesin PF00225.23 gi|91774217|ref|YP_566909.1| - 0.13 11.2 0.0 0.21 10.5 0.0 1.2 1 0 0 1 1 1 0 Kinesin motor domain SOUL PF04832.12 gi|91774218|ref|YP_566910.1| - 4.6e-40 137.5 0.0 5.1e-40 137.4 0.0 1.0 1 0 0 1 1 1 1 SOUL heme-binding protein FAD_binding_7 PF03441.14 gi|91774219|ref|YP_566911.1| - 1e-76 256.9 0.8 1.4e-76 256.5 0.8 1.2 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.18 gi|91774219|ref|YP_566911.1| - 1.1e-43 149.1 0.0 2.2e-43 148.1 0.0 1.5 1 0 0 1 1 1 1 DNA photolyase MarR PF01047.22 gi|91774220|ref|YP_566912.1| - 2.5e-10 40.1 0.0 3.8e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|91774220|ref|YP_566912.1| - 3.6e-07 30.3 0.4 9e-07 29.0 0.4 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 gi|91774220|ref|YP_566912.1| - 1.7e-06 27.8 0.0 2.4e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|91774220|ref|YP_566912.1| - 7.8e-05 23.1 0.0 0.00015 22.2 0.0 1.5 1 1 1 2 2 2 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|91774220|ref|YP_566912.1| - 0.0016 18.3 1.7 0.002 18.0 0.1 2.0 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|91774220|ref|YP_566912.1| - 0.019 15.0 0.0 0.034 14.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|91774220|ref|YP_566912.1| - 0.059 13.2 0.0 0.096 12.5 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|91774220|ref|YP_566912.1| - 0.067 13.2 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MatE PF01554.18 gi|91774221|ref|YP_566913.1| - 8.4e-35 119.8 32.2 4.6e-21 75.2 11.4 3.3 3 1 1 4 4 4 2 MatE Polysacc_synt_C PF14667.6 gi|91774221|ref|YP_566913.1| - 1.4e-08 34.9 15.6 1.4e-08 34.9 15.6 4.4 3 2 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MTTB PF06253.11 gi|91774222|ref|YP_566914.1| - 5.1e-53 179.8 0.0 6.2e-53 179.5 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) MTTB PF06253.11 gi|91774223|ref|YP_566915.1| - 9.1e-29 99.8 0.0 9.8e-29 99.7 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) B12-binding PF02310.19 gi|91774224|ref|YP_566916.1| - 2.2e-21 76.1 3.7 1.3e-20 73.7 1.2 2.2 2 0 0 2 2 2 1 B12 binding domain B12-binding_2 PF02607.17 gi|91774224|ref|YP_566916.1| - 9.7e-21 74.0 1.4 1.9e-20 73.1 1.1 1.7 2 0 0 2 2 2 1 B12 binding domain EamA PF00892.20 gi|91774225|ref|YP_566917.1| - 1.6e-11 44.6 49.4 5e-06 26.7 17.0 3.1 2 1 0 2 2 2 2 EamA-like transporter family MTTB PF06253.11 gi|91774227|ref|YP_566919.1| - 4.3e-87 292.2 0.0 5.8e-87 291.8 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) Phage_integrase PF00589.22 gi|91774229|ref|YP_566921.1| - 3.6e-23 82.2 0.7 4.3e-23 82.0 0.7 1.1 1 0 0 1 1 1 1 Phage integrase family TPR_1 PF00515.28 gi|91774230|ref|YP_566922.1| - 1.9e-100 325.0 59.2 7.6e-13 47.7 0.9 11.2 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|91774230|ref|YP_566922.1| - 1.2e-87 281.1 36.1 3.8e-10 39.1 0.5 11.3 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_11 PF13414.6 gi|91774230|ref|YP_566922.1| - 1.9e-69 229.1 44.8 1.5e-10 40.6 1.2 11.6 3 2 9 12 12 12 10 TPR repeat TPR_8 PF13181.6 gi|91774230|ref|YP_566922.1| - 3.7e-69 223.2 45.8 1.3e-08 34.4 0.2 11.2 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_17 PF13431.6 gi|91774230|ref|YP_566922.1| - 1.3e-52 172.5 44.9 3.3e-06 27.1 0.3 10.5 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_7 PF13176.6 gi|91774230|ref|YP_566922.1| - 1.7e-52 171.7 19.2 0.00018 21.3 0.0 11.2 6 3 5 11 11 11 9 Tetratricopeptide repeat TPR_12 PF13424.6 gi|91774230|ref|YP_566922.1| - 2.5e-49 165.4 23.3 7.1e-07 29.4 0.5 9.7 6 3 4 10 10 9 9 Tetratricopeptide repeat TPR_16 PF13432.6 gi|91774230|ref|YP_566922.1| - 5e-37 126.3 0.0 5.9e-08 33.2 0.1 6.3 5 1 1 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|91774230|ref|YP_566922.1| - 3.3e-34 114.6 0.0 0.0093 16.7 0.1 10.6 5 4 5 10 10 10 7 Tetratricopeptide repeat TPR_19 PF14559.6 gi|91774230|ref|YP_566922.1| - 4.7e-32 110.3 6.3 3e-05 24.4 0.5 6.5 2 1 3 7 7 7 7 Tetratricopeptide repeat TPR_10 PF13374.6 gi|91774230|ref|YP_566922.1| - 3.8e-31 106.1 25.3 0.0032 17.3 0.3 9.9 10 0 0 10 10 10 9 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|91774230|ref|YP_566922.1| - 2e-20 72.8 31.7 2.7e-06 27.5 3.2 5.4 2 2 4 6 6 6 6 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 gi|91774230|ref|YP_566922.1| - 5.2e-20 71.4 0.0 4.5e-05 23.5 0.0 6.2 2 2 7 9 9 9 7 Tetratricopeptide repeat TPR_6 PF13174.6 gi|91774230|ref|YP_566922.1| - 1.7e-16 59.6 9.6 3.2 8.6 0.0 10.4 10 0 0 10 10 10 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|91774230|ref|YP_566922.1| - 1.4e-13 50.6 22.1 0.0041 16.1 0.1 7.0 1 1 8 9 9 9 7 NMDA receptor-regulated protein 1 NRBF2_MIT PF17169.4 gi|91774230|ref|YP_566922.1| - 1.5e-12 47.5 22.0 0.57 10.4 0.1 9.4 1 1 8 9 9 9 4 MIT domain of nuclear receptor-binding factor 2 SRP_TPR_like PF17004.5 gi|91774230|ref|YP_566922.1| - 5.6e-12 45.7 13.7 0.022 14.8 1.0 6.3 1 1 5 6 6 6 4 Putative TPR-like repeat HTH_Bact PF18768.1 gi|91774230|ref|YP_566922.1| - 3.6e-11 42.4 5.0 5.7 6.6 0.0 9.2 10 0 0 10 10 9 0 Helix-turn-helix bacterial domain TPR_21 PF09976.9 gi|91774230|ref|YP_566922.1| - 3.7e-11 43.1 5.3 1.5 8.5 0.0 8.1 1 1 8 9 9 9 2 Tetratricopeptide repeat-like domain Fis1_TPR_C PF14853.6 gi|91774230|ref|YP_566922.1| - 4e-10 39.6 19.8 0.56 10.3 0.0 8.7 10 0 0 10 10 10 2 Fis1 C-terminal tetratricopeptide repeat DUF3856 PF12968.7 gi|91774230|ref|YP_566922.1| - 9.4e-10 38.7 8.3 9.3 6.3 0.0 9.5 2 1 6 8 8 8 0 Domain of Unknown Function (DUF3856) MIT PF04212.18 gi|91774230|ref|YP_566922.1| - 9.4e-10 38.4 46.2 0.74 9.9 0.3 10.5 12 0 0 12 12 10 5 MIT (microtubule interacting and transport) domain PPR PF01535.20 gi|91774230|ref|YP_566922.1| - 9.6e-09 34.9 22.8 9.1 6.8 0.0 10.2 11 0 0 11 11 10 0 PPR repeat TPR_3 PF07720.12 gi|91774230|ref|YP_566922.1| - 2.3e-08 33.9 12.8 12 6.0 0.1 8.8 9 0 0 9 9 9 0 Tetratricopeptide repeat BTAD PF03704.17 gi|91774230|ref|YP_566922.1| - 7.6e-08 32.9 0.1 1.8 9.0 0.1 5.1 3 2 0 4 4 4 1 Bacterial transcriptional activator domain SHNi-TPR PF10516.9 gi|91774230|ref|YP_566922.1| - 1e-05 24.9 10.4 39 3.8 0.0 8.7 9 0 0 9 9 9 0 SHNi-TPR TPR_20 PF14561.6 gi|91774230|ref|YP_566922.1| - 0.0004 20.6 0.6 0.0035 17.6 0.4 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat Sel1 PF08238.12 gi|91774230|ref|YP_566922.1| - 0.0017 19.0 13.2 92 3.9 0.0 9.0 11 1 0 11 11 9 0 Sel1 repeat PPR_2 PF13041.6 gi|91774230|ref|YP_566922.1| - 0.0034 17.5 17.4 64 3.9 0.0 8.7 9 0 0 9 9 8 0 PPR repeat family TPR_15 PF13429.6 gi|91774230|ref|YP_566922.1| - 0.0069 15.6 0.0 3 7.0 0.1 3.8 1 1 4 5 5 5 1 Tetratricopeptide repeat RhoGEF PF00621.20 gi|91774230|ref|YP_566922.1| - 0.011 15.9 14.7 2.5e+02 1.8 14.7 4.8 1 1 0 1 1 1 0 RhoGEF domain ChAPs PF09295.10 gi|91774230|ref|YP_566922.1| - 0.023 13.7 0.9 0.43 9.5 0.1 2.9 2 1 2 4 4 4 0 ChAPs (Chs5p-Arf1p-binding proteins) NSF PF02071.20 gi|91774230|ref|YP_566922.1| - 0.14 13.0 42.8 32 5.9 0.3 9.9 10 0 0 10 10 9 0 Aromatic-di-Alanine (AdAR) repeat Val_tRNA-synt_C PF10458.9 gi|91774230|ref|YP_566922.1| - 0.31 11.4 3.3 0.93 9.8 0.3 2.5 1 1 1 2 2 2 0 Valyl tRNA synthetase tRNA binding arm Coatomer_E PF04733.14 gi|91774230|ref|YP_566922.1| - 0.34 10.3 8.1 0.057 12.8 0.5 3.1 3 0 0 3 3 3 0 Coatomer epsilon subunit Sda PF08970.10 gi|91774230|ref|YP_566922.1| - 1.7 8.5 39.2 21 5.0 0.1 9.8 11 0 0 11 11 10 0 Sporulation inhibitor A Phage_integrase PF00589.22 gi|91774232|ref|YP_566924.1| - 5.8e-21 75.0 0.0 1.2e-20 74.0 0.0 1.5 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|91774232|ref|YP_566924.1| - 1e-15 57.9 0.7 2.1e-15 56.9 0.7 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|91774232|ref|YP_566924.1| - 0.00025 21.3 0.0 0.00082 19.6 0.0 1.9 1 1 1 2 2 2 1 Phage integrase, N-terminal SAM-like domain DZR PF12773.7 gi|91774232|ref|YP_566924.1| - 0.00086 19.3 0.6 0.0018 18.3 0.6 1.4 1 0 0 1 1 1 1 Double zinc ribbon DUF3435 PF11917.8 gi|91774232|ref|YP_566924.1| - 0.016 14.1 0.0 0.027 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) zinc_ribbon_15 PF17032.5 gi|91774232|ref|YP_566924.1| - 0.044 14.5 0.5 0.091 13.5 0.5 1.5 1 0 0 1 1 1 0 zinc-ribbon family Mu-like_Com PF10122.9 gi|91774232|ref|YP_566924.1| - 0.16 11.4 0.6 0.33 10.4 0.6 1.5 1 0 0 1 1 1 0 Mu-like prophage protein Com Phage_int_SAM_3 PF14659.6 gi|91774232|ref|YP_566924.1| - 0.23 11.8 4.0 0.44 10.9 2.3 2.5 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain zinc_ribbon_2 PF13240.6 gi|91774232|ref|YP_566924.1| - 0.61 9.9 4.4 1.2 9.0 4.4 1.4 1 0 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|91774232|ref|YP_566924.1| - 0.77 9.3 3.0 1.5 8.3 2.1 1.9 2 0 0 2 2 2 0 zinc-ribbon domain Zeta_toxin PF06414.12 gi|91774233|ref|YP_566925.1| - 4.9e-06 26.0 0.0 0.0025 17.1 0.0 2.1 2 0 0 2 2 2 2 Zeta toxin ATPase_2 PF01637.18 gi|91774233|ref|YP_566925.1| - 0.0053 16.7 0.0 0.0073 16.3 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea DUF3986 PF13143.6 gi|91774233|ref|YP_566925.1| - 0.02 15.9 4.9 0.1 13.6 0.7 3.0 2 1 0 3 3 3 0 Protein of unknown function (DUF3986) AAA_22 PF13401.6 gi|91774233|ref|YP_566925.1| - 0.038 14.3 0.0 0.18 12.1 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|91774233|ref|YP_566925.1| - 0.059 13.5 0.0 0.24 11.6 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|91774233|ref|YP_566925.1| - 0.098 13.1 0.0 0.26 11.8 0.0 1.7 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|91774233|ref|YP_566925.1| - 0.11 12.9 0.0 11 6.5 0.0 2.8 3 0 0 3 3 3 0 RNA helicase AAA_7 PF12775.7 gi|91774233|ref|YP_566925.1| - 0.13 11.7 0.0 0.28 10.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region SMC_N PF02463.19 gi|91774233|ref|YP_566925.1| - 0.14 11.5 0.1 0.51 9.7 0.0 1.9 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|91774233|ref|YP_566925.1| - 0.22 11.2 4.7 0.3 10.7 4.7 1.4 1 1 0 1 1 1 0 AAA ATPase domain RuBisCO_large PF00016.20 gi|91774234|ref|YP_566926.1| - 9e-94 314.0 0.0 1.1e-67 228.4 0.0 2.1 1 1 1 2 2 2 2 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 gi|91774234|ref|YP_566926.1| - 1.1e-30 106.2 0.0 2.8e-30 104.9 0.0 1.7 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain Fer4_13 PF13370.6 gi|91774235|ref|YP_566927.1| - 2.2e-15 56.9 2.2 2.7e-15 56.6 2.2 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|91774235|ref|YP_566927.1| - 0.00083 20.0 0.4 0.0012 19.5 0.4 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain CMD PF02627.20 gi|91774236|ref|YP_566928.1| - 1.1e-08 34.9 0.0 1.3e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SinI PF08671.10 gi|91774236|ref|YP_566928.1| - 0.11 12.3 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 Anti-repressor SinI Multi_Drug_Res PF00893.19 gi|91774237|ref|YP_566929.1| - 1.6e-24 86.4 7.8 2e-24 86.1 7.8 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 gi|91774237|ref|YP_566929.1| - 0.0049 17.0 11.1 0.012 15.7 11.1 1.7 1 1 0 1 1 1 1 EamA-like transporter family DUF5381 PF17353.2 gi|91774237|ref|YP_566929.1| - 0.041 13.7 1.6 0.041 13.7 1.6 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5381) SLATT_6 PF18169.1 gi|91774237|ref|YP_566929.1| - 2.2 7.8 6.0 0.51 9.9 0.5 1.9 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 DUF4040 PF13244.6 gi|91774237|ref|YP_566929.1| - 7.1 6.9 7.7 0.21 11.8 0.5 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4040) DUF420 PF04238.12 gi|91774238|ref|YP_566930.1| - 0.0028 18.0 10.1 0.0028 18.0 10.1 1.8 2 1 0 2 2 2 1 Protein of unknown function (DUF420) Ninjurin PF04923.12 gi|91774238|ref|YP_566930.1| - 0.0088 16.0 5.8 0.039 13.9 0.5 2.4 2 1 0 2 2 2 2 Ninjurin Adeno_E3_CR2 PF02439.15 gi|91774238|ref|YP_566930.1| - 0.35 10.7 0.0 0.35 10.7 0.0 3.5 4 0 0 4 4 4 0 Adenovirus E3 region protein CR2 GPI2 PF06432.11 gi|91774238|ref|YP_566930.1| - 2 7.8 11.0 2.9 7.3 11.0 1.3 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase DUF2070 PF09843.9 gi|91774238|ref|YP_566930.1| - 6.8 4.9 16.4 8.1 4.6 16.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) zf_CopZ PF18423.1 gi|91774239|ref|YP_566931.1| - 1.3e-16 60.3 1.5 1.3e-16 60.3 1.5 1.6 2 0 0 2 2 2 1 Zinc binding domain PMSR PF01625.21 gi|91774240|ref|YP_566932.1| - 1.4e-60 203.9 0.5 1.6e-60 203.7 0.5 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase SelR PF01641.18 gi|91774241|ref|YP_566933.1| - 6.8e-51 171.4 0.0 8e-51 171.2 0.0 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 gi|91774241|ref|YP_566933.1| - 0.00069 19.8 0.6 0.0013 18.9 0.6 1.6 1 1 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly ADD_ATRX PF17981.1 gi|91774241|ref|YP_566933.1| - 0.0092 15.8 0.1 4.3 7.3 0.0 2.3 2 0 0 2 2 2 2 Cysteine Rich ADD domain zf-ribbon_3 PF13248.6 gi|91774241|ref|YP_566933.1| - 0.021 14.2 1.9 0.47 9.9 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|91774241|ref|YP_566933.1| - 0.022 14.3 1.6 5.7 6.5 0.3 3.2 2 1 1 3 3 3 0 TFIIB zinc-binding zf-LITAF-like PF10601.9 gi|91774241|ref|YP_566933.1| - 0.028 14.7 0.2 0.81 10.0 0.1 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|91774241|ref|YP_566933.1| - 0.053 13.2 2.1 5.2 6.8 0.2 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.6 gi|91774241|ref|YP_566933.1| - 0.11 12.2 2.0 3.8 7.4 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain Mu-like_Com PF10122.9 gi|91774241|ref|YP_566933.1| - 0.27 10.7 1.2 0.31 10.5 0.0 1.6 2 0 0 2 2 2 0 Mu-like prophage protein Com Neurensin PF14927.6 gi|91774242|ref|YP_566934.1| - 0.034 13.8 1.2 0.11 12.2 0.1 2.1 2 0 0 2 2 2 0 Neurensin Gly-zipper_Omp PF13488.6 gi|91774242|ref|YP_566934.1| - 0.037 14.0 6.4 0.06 13.4 6.4 1.4 1 0 0 1 1 1 0 Glycine zipper DUF2721 PF11026.8 gi|91774242|ref|YP_566934.1| - 0.28 11.1 3.6 4.9 7.0 1.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) MS_channel PF00924.18 gi|91774243|ref|YP_566935.1| - 5.3e-42 143.7 0.8 8.8e-42 143.0 0.8 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel UPF0182 PF03699.13 gi|91774243|ref|YP_566935.1| - 0.58 8.2 3.2 0.75 7.8 3.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) Methyltransf_25 PF13649.6 gi|91774244|ref|YP_566936.1| - 3.3e-18 66.2 0.0 4.8e-18 65.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|91774244|ref|YP_566936.1| - 5.1e-18 65.2 0.0 6.9e-18 64.8 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 gi|91774244|ref|YP_566936.1| - 5.9e-18 65.3 0.0 8.7e-18 64.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|91774244|ref|YP_566936.1| - 1.1e-16 60.9 0.0 1.3e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|91774244|ref|YP_566936.1| - 2.2e-09 38.0 0.0 3.4e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|91774244|ref|YP_566936.1| - 3.2e-08 33.6 0.0 4.1e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|91774244|ref|YP_566936.1| - 4.8e-08 32.6 0.0 6e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|91774244|ref|YP_566936.1| - 7e-07 29.0 0.0 9.1e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_29 PF03141.16 gi|91774244|ref|YP_566936.1| - 8.3e-07 27.9 0.0 9.4e-07 27.7 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_8 PF05148.15 gi|91774244|ref|YP_566936.1| - 2.1e-05 24.5 0.1 0.00017 21.5 0.1 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase MetW PF07021.12 gi|91774244|ref|YP_566936.1| - 0.00012 21.8 0.1 0.00029 20.5 0.1 1.7 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|91774244|ref|YP_566936.1| - 0.00094 18.7 0.0 0.0013 18.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TPMT PF05724.11 gi|91774244|ref|YP_566936.1| - 0.0024 17.5 0.0 0.006 16.3 0.0 1.5 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) UPF0020 PF01170.18 gi|91774244|ref|YP_566936.1| - 0.0029 17.3 0.0 0.0038 16.9 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_32 PF13679.6 gi|91774244|ref|YP_566936.1| - 0.0037 17.3 0.0 0.005 16.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|91774244|ref|YP_566936.1| - 0.026 14.3 0.0 0.036 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DOT1 PF08123.13 gi|91774244|ref|YP_566936.1| - 0.028 14.0 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 FtsJ PF01728.19 gi|91774244|ref|YP_566936.1| - 0.029 14.5 0.0 0.055 13.6 0.0 1.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_18 PF12847.7 gi|91774244|ref|YP_566936.1| - 0.047 13.6 0.0 0.075 13.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain NodS PF05401.11 gi|91774244|ref|YP_566936.1| - 0.071 12.7 0.0 0.098 12.3 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) GCD14 PF08704.10 gi|91774244|ref|YP_566936.1| - 0.13 11.9 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit FAA_hydrolase PF01557.18 gi|91774245|ref|YP_566937.1| - 6.8e-73 244.9 0.0 7.9e-73 244.7 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family HTH_24 PF13412.6 gi|91774246|ref|YP_566938.1| - 0.00077 19.0 0.1 0.0014 18.1 0.1 1.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|91774246|ref|YP_566938.1| - 0.0016 18.3 0.1 0.0025 17.6 0.1 1.3 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|91774246|ref|YP_566938.1| - 0.014 15.7 0.1 0.019 15.3 0.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_5 PF01022.20 gi|91774246|ref|YP_566938.1| - 0.019 14.9 0.3 0.057 13.3 0.2 1.9 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family RNA_pol_Rpc34 PF05158.12 gi|91774246|ref|YP_566938.1| - 0.031 13.6 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit FaeA PF04703.12 gi|91774246|ref|YP_566938.1| - 0.061 13.7 0.1 0.11 12.9 0.0 1.5 2 0 0 2 2 2 0 FaeA-like protein HTH_47 PF16221.5 gi|91774246|ref|YP_566938.1| - 0.074 12.6 0.0 0.095 12.3 0.0 1.3 1 0 0 1 1 1 0 winged helix-turn-helix HTH_12 PF08461.10 gi|91774246|ref|YP_566938.1| - 0.075 13.0 0.1 0.18 11.7 0.0 1.9 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain RepL PF05732.11 gi|91774246|ref|YP_566938.1| - 0.11 12.0 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) MerR_1 PF13411.6 gi|91774246|ref|YP_566938.1| - 0.11 12.5 0.2 1.4 9.1 0.0 2.6 2 1 0 2 2 2 0 MerR HTH family regulatory protein tRNA-synt_1c PF00749.21 gi|91774247|ref|YP_566939.1| - 2.1e-61 207.6 0.0 2.8e-61 207.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|91774247|ref|YP_566939.1| - 1.3e-27 96.8 0.0 2.1e-27 96.1 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain Ribosomal_S3Ae PF01015.18 gi|91774248|ref|YP_566940.1| - 4e-69 232.2 4.8 5.3e-69 231.9 4.8 1.1 1 0 0 1 1 1 1 Ribosomal S3Ae family tRNA_bind_4 PF18490.1 gi|91774249|ref|YP_566941.1| - 9.1e-60 201.1 0.1 1.3e-59 200.6 0.1 1.2 1 0 0 1 1 1 1 tRNA-binding domain tRNA-synt_2b PF00587.25 gi|91774249|ref|YP_566941.1| - 3.6e-06 27.1 0.0 8.9e-06 25.8 0.0 1.6 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) UDG PF03167.19 gi|91774250|ref|YP_566942.1| - 6e-38 130.3 0.0 7.2e-38 130.0 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DHHA1 PF02272.19 gi|91774252|ref|YP_566944.1| - 5.4e-17 62.5 1.4 1.4e-16 61.2 0.4 2.3 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|91774252|ref|YP_566944.1| - 0.0018 18.4 0.6 0.0056 16.9 0.6 1.8 1 0 0 1 1 1 1 DHH family EIIA-man PF03610.16 gi|91774252|ref|YP_566944.1| - 0.012 15.8 0.2 0.081 13.2 0.0 2.5 2 0 0 2 2 2 0 PTS system fructose IIA component ALS_ss_C PF10369.9 gi|91774252|ref|YP_566944.1| - 0.071 13.3 0.3 0.95 9.7 0.0 2.8 4 0 0 4 4 4 0 Small subunit of acetolactate synthase Nic96 PF04097.14 gi|91774252|ref|YP_566944.1| - 0.18 10.3 0.0 0.25 9.8 0.0 1.1 1 0 0 1 1 1 0 Nup93/Nic96 NTP_transferase PF00483.23 gi|91774253|ref|YP_566945.1| - 6.2e-46 157.0 0.0 8.9e-46 156.5 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|91774253|ref|YP_566945.1| - 8.2e-16 57.0 25.6 6.8e-09 35.1 3.7 5.7 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|91774253|ref|YP_566945.1| - 3.9e-15 56.6 0.0 5.1e-15 56.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|91774253|ref|YP_566945.1| - 3.9e-05 23.3 4.0 3.9e-05 23.3 4.0 5.0 5 0 0 5 5 5 2 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 gi|91774253|ref|YP_566945.1| - 0.0001 20.6 0.5 0.00017 19.9 0.5 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) IspD PF01128.19 gi|91774253|ref|YP_566945.1| - 0.00074 19.3 0.0 0.0011 18.7 0.0 1.5 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 gi|91774253|ref|YP_566945.1| - 0.048 13.6 0.0 0.094 12.6 0.0 1.4 1 1 0 1 1 1 0 Cytidylyltransferase PGM_PMM_I PF02878.16 gi|91774254|ref|YP_566946.1| - 6.8e-40 136.0 0.0 2e-39 134.4 0.0 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|91774254|ref|YP_566946.1| - 1.4e-25 89.8 0.0 4e-25 88.4 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|91774254|ref|YP_566946.1| - 7.1e-20 71.3 0.0 1.3e-19 70.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|91774254|ref|YP_566946.1| - 4.9e-11 42.7 0.1 1e-10 41.6 0.1 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain SIS PF01380.22 gi|91774255|ref|YP_566947.1| - 4.5e-58 194.8 0.4 4.3e-28 97.8 0.0 2.8 3 0 0 3 3 3 2 SIS domain GATase_6 PF13522.6 gi|91774255|ref|YP_566947.1| - 3.6e-20 72.5 0.0 8.2e-20 71.4 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|91774255|ref|YP_566947.1| - 5.5e-16 58.6 0.0 4.1e-15 55.8 0.0 2.3 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|91774255|ref|YP_566947.1| - 3.3e-05 22.9 0.0 5.4e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF5124 PF17160.4 gi|91774255|ref|YP_566947.1| - 0.015 16.1 0.0 0.14 13.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5124) Imm3 PF14425.6 gi|91774255|ref|YP_566947.1| - 0.018 15.1 0.2 1.5 8.9 0.0 3.0 3 0 0 3 3 3 0 Immunity protein Imm3 NTP_transferase PF00483.23 gi|91774256|ref|YP_566948.1| - 1.3e-43 149.4 0.1 1.8e-43 148.9 0.1 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|91774256|ref|YP_566948.1| - 4.2e-19 67.5 32.4 8.2e-09 34.9 0.6 4.8 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|91774256|ref|YP_566948.1| - 5.3e-14 52.9 0.0 7.1e-14 52.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|91774256|ref|YP_566948.1| - 5.4e-07 29.3 24.6 0.00017 21.3 5.7 4.9 3 1 0 3 3 3 3 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|91774256|ref|YP_566948.1| - 0.00016 21.5 1.0 0.00083 19.2 0.1 2.6 3 1 1 4 4 4 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 gi|91774256|ref|YP_566948.1| - 0.00083 19.3 0.3 0.0014 18.6 0.3 1.4 1 0 0 1 1 1 1 Cytidylyltransferase Arg_repressor_C PF02863.18 gi|91774256|ref|YP_566948.1| - 0.045 13.6 1.2 0.25 11.2 1.2 2.3 1 0 0 1 1 1 0 Arginine repressor, C-terminal domain DUF1694 PF07997.11 gi|91774256|ref|YP_566948.1| - 0.057 13.5 0.5 0.37 10.9 0.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1694) PTA_PTB PF01515.19 gi|91774256|ref|YP_566948.1| - 0.064 12.6 0.1 0.11 11.7 0.1 1.4 1 0 0 1 1 1 0 Phosphate acetyl/butaryl transferase Fucokinase PF07959.12 gi|91774256|ref|YP_566948.1| - 1.5 7.6 10.6 4.8 6.0 4.1 3.3 3 1 0 3 3 3 0 L-fucokinase Ribosomal_S13_N PF08069.12 gi|91774257|ref|YP_566949.1| - 5.4e-25 87.2 0.4 1.2e-24 86.1 0.4 1.6 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|91774257|ref|YP_566949.1| - 3.1e-15 56.1 0.4 4.2e-15 55.7 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 Sec3_C_2 PF15278.6 gi|91774258|ref|YP_566950.1| - 0.34 11.3 2.9 0.47 10.8 1.5 1.8 2 0 0 2 2 2 0 Sec3 exocyst complex subunit Clavanin PF05452.11 gi|91774259|ref|YP_566951.1| - 0.00095 19.3 0.2 0.0013 18.9 0.2 1.2 1 0 0 1 1 1 1 Clavanin tRNA-synt_His PF13393.6 gi|91774260|ref|YP_566952.1| - 1.5e-64 218.3 0.0 1.8e-64 218.0 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|91774260|ref|YP_566952.1| - 1.1e-15 58.1 0.0 1.9e-15 57.3 0.0 1.4 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 gi|91774260|ref|YP_566952.1| - 4e-05 22.9 2.1 0.057 12.5 0.6 2.9 2 1 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 gi|91774260|ref|YP_566952.1| - 0.0011 18.6 0.0 0.0074 15.8 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) EF-G-binding_N PF07299.11 gi|91774260|ref|YP_566952.1| - 0.054 14.0 0.5 4.2 8.0 0.0 3.2 3 0 0 3 3 3 0 Elongation factor G-binding protein, N-terminal HGTP_anticodon PF03129.20 gi|91774260|ref|YP_566952.1| - 0.068 13.3 0.1 0.14 12.3 0.1 1.5 1 0 0 1 1 1 0 Anticodon binding domain Amidohydro_1 PF01979.20 gi|91774261|ref|YP_566953.1| - 1.5e-29 103.5 0.1 5.1e-29 101.7 0.1 1.8 1 1 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.22 gi|91774261|ref|YP_566953.1| - 2.2e-11 43.7 0.0 3.1e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.11 gi|91774261|ref|YP_566953.1| - 3.2e-09 36.8 0.0 4.2e-08 33.1 0.0 2.2 2 1 0 2 2 2 1 Amidohydrolase family Phage_DsbA PF11126.8 gi|91774261|ref|YP_566953.1| - 0.065 13.4 0.1 0.24 11.7 0.2 1.8 2 0 0 2 2 2 0 Transcriptional regulator DsbA Peripla_BP_2 PF01497.18 gi|91774261|ref|YP_566953.1| - 0.099 12.2 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Periplasmic binding protein Usp PF00582.26 gi|91774262|ref|YP_566954.1| - 3e-37 128.3 0.0 3.4e-37 128.1 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family PCP_red PF08369.10 gi|91774262|ref|YP_566954.1| - 0.12 12.6 0.2 17 5.7 0.0 2.7 3 0 0 3 3 3 0 Proto-chlorophyllide reductase 57 kD subunit CBS PF00571.28 gi|91774263|ref|YP_566955.1| - 5.5e-42 142.0 12.0 1.3e-12 47.9 0.6 4.3 4 0 0 4 4 4 4 CBS domain SNURF PF07192.11 gi|91774263|ref|YP_566955.1| - 0.0081 16.0 0.0 0.017 14.9 0.0 1.5 1 0 0 1 1 1 1 SNURF/RPN4 protein Peptidase_S55 PF05580.12 gi|91774263|ref|YP_566955.1| - 0.056 13.4 0.1 1.7 8.6 0.0 2.2 2 0 0 2 2 2 0 SpoIVB peptidase S55 GAF PF01590.26 gi|91774263|ref|YP_566955.1| - 0.076 13.6 0.1 29 5.3 0.0 3.0 2 1 1 3 3 3 0 GAF domain RibD_C PF01872.17 gi|91774264|ref|YP_566956.1| - 1.2e-52 178.7 0.0 1.3e-52 178.6 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Thioredoxin PF00085.20 gi|91774265|ref|YP_566957.1| - 8.9e-10 38.5 0.0 1.2e-09 38.1 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|91774265|ref|YP_566957.1| - 0.0014 18.9 0.0 0.0025 18.1 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like DUF953 PF06110.11 gi|91774265|ref|YP_566957.1| - 0.03 13.9 0.0 0.04 13.5 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Thioredoxin_7 PF13899.6 gi|91774265|ref|YP_566957.1| - 0.063 13.5 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|91774265|ref|YP_566957.1| - 0.13 12.7 0.0 0.28 11.7 0.0 1.5 2 0 0 2 2 2 0 Thioredoxin-like domain DsbD PF02683.15 gi|91774266|ref|YP_566958.1| - 1.1e-33 116.9 29.5 2.3e-33 115.9 29.5 1.4 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region MerE PF05052.12 gi|91774266|ref|YP_566958.1| - 3.4 7.6 11.8 0.5 10.3 1.0 2.7 3 0 0 3 3 3 0 MerE protein CbiC PF02570.15 gi|91774267|ref|YP_566959.1| - 3.7e-65 219.3 2.7 4.4e-65 219.0 2.7 1.1 1 0 0 1 1 1 1 Precorrin-8X methylmutase DUF4258 PF14076.6 gi|91774267|ref|YP_566959.1| - 0.05 14.0 0.3 7.2 7.1 0.2 3.3 2 2 0 2 2 2 0 Domain of unknown function (DUF4258) TP_methylase PF00590.20 gi|91774268|ref|YP_566960.1| - 1.3e-36 126.6 0.2 1.5e-36 126.4 0.2 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases IMP_cyclohyd PF07826.11 gi|91774268|ref|YP_566960.1| - 0.051 13.2 0.1 0.12 12.0 0.0 1.7 2 0 0 2 2 2 0 IMP cyclohydrolase-like protein TP_methylase PF00590.20 gi|91774269|ref|YP_566961.1| - 5e-45 154.0 0.4 5.8e-45 153.8 0.4 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|91774269|ref|YP_566961.1| - 0.00014 22.3 0.1 0.00048 20.6 0.1 1.9 1 1 0 1 1 1 1 Radical SAM superfamily GTP-bdg_N PF13167.6 gi|91774269|ref|YP_566961.1| - 0.091 13.4 0.1 3.3 8.5 0.0 2.6 2 1 0 2 2 2 0 GTP-binding GTPase N-terminal ApbA PF02558.16 gi|91774269|ref|YP_566961.1| - 0.13 11.9 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA TP_methylase PF00590.20 gi|91774270|ref|YP_566962.1| - 2.4e-34 119.1 0.0 3.2e-34 118.8 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Methyltransf_31 PF13847.6 gi|91774271|ref|YP_566963.1| - 1.1e-12 48.0 0.1 1.2e-12 47.9 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|91774271|ref|YP_566963.1| - 4.4e-09 36.4 0.5 1.1e-08 35.2 0.5 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91774271|ref|YP_566963.1| - 1.6e-08 35.2 0.1 2.5e-08 34.5 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|91774271|ref|YP_566963.1| - 1.7e-08 34.2 0.1 2.1e-08 33.9 0.1 1.2 1 1 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|91774271|ref|YP_566963.1| - 1.7e-07 31.2 0.1 2.2e-07 30.8 0.1 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|91774271|ref|YP_566963.1| - 4.2e-07 29.5 0.6 5.1e-07 29.3 0.6 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrmA PF06325.13 gi|91774271|ref|YP_566963.1| - 7.5e-07 28.8 0.3 7.5e-07 28.8 0.3 1.4 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 gi|91774271|ref|YP_566963.1| - 4.1e-06 26.3 0.1 4.5e-06 26.1 0.1 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_12 PF08242.12 gi|91774271|ref|YP_566963.1| - 2.3e-05 25.1 0.1 3.3e-05 24.6 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|91774271|ref|YP_566963.1| - 2.8e-05 23.8 0.0 3.6e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 gi|91774271|ref|YP_566963.1| - 6.7e-05 23.5 0.1 0.00011 22.7 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|91774271|ref|YP_566963.1| - 0.00032 20.5 0.1 0.0015 18.2 0.1 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 DOT1 PF08123.13 gi|91774271|ref|YP_566963.1| - 0.00072 19.1 0.1 0.0013 18.3 0.1 1.6 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_32 PF13679.6 gi|91774271|ref|YP_566963.1| - 0.0008 19.4 0.0 0.0013 18.8 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|91774271|ref|YP_566963.1| - 0.00089 19.0 0.1 0.0012 18.6 0.1 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_15 PF09445.10 gi|91774271|ref|YP_566963.1| - 0.0011 18.6 0.5 0.0017 18.0 0.5 1.4 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.20 gi|91774271|ref|YP_566963.1| - 0.0014 17.7 0.1 0.015 14.4 0.0 1.9 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltransf_5 PF01795.19 gi|91774271|ref|YP_566963.1| - 0.0024 17.5 0.0 0.0027 17.2 0.0 1.2 1 0 0 1 1 1 1 MraW methylase family Methyltransf_23 PF13489.6 gi|91774271|ref|YP_566963.1| - 0.0025 17.7 0.0 0.0029 17.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|91774271|ref|YP_566963.1| - 0.0058 16.1 0.4 0.01 15.3 0.0 1.5 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_24 PF13578.6 gi|91774271|ref|YP_566963.1| - 0.0089 17.0 0.0 0.017 16.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GATase_3 PF07685.14 gi|91774271|ref|YP_566963.1| - 0.078 12.6 0.0 0.13 11.9 0.0 1.3 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain AviRa PF11599.8 gi|91774271|ref|YP_566963.1| - 0.093 12.2 0.0 0.12 11.8 0.0 1.4 1 1 0 1 1 1 0 RRNA methyltransferase AviRa Methyltransf_2 PF00891.18 gi|91774271|ref|YP_566963.1| - 0.094 12.0 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain GATase_3 PF07685.14 gi|91774272|ref|YP_566964.1| - 5e-50 169.8 0.0 7.4e-50 169.3 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|91774272|ref|YP_566964.1| - 4e-19 68.9 0.0 6.3e-19 68.3 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|91774272|ref|YP_566964.1| - 8.8e-19 68.1 0.1 9.9e-18 64.7 0.1 2.1 1 1 0 1 1 1 1 AAA domain GATase PF00117.28 gi|91774272|ref|YP_566964.1| - 7.8e-05 22.5 0.0 0.00016 21.5 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|91774272|ref|YP_566964.1| - 0.0015 18.4 0.0 0.0026 17.6 0.0 1.3 1 0 0 1 1 1 1 SNO glutamine amidotransferase family Glycos_transf_3 PF00591.21 gi|91774273|ref|YP_566965.1| - 2.1e-94 315.9 2.0 2.7e-94 315.5 2.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|91774273|ref|YP_566965.1| - 7.6e-17 60.9 0.4 3.7e-16 58.7 0.3 2.2 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain PRAI PF00697.22 gi|91774274|ref|YP_566966.1| - 9.6e-34 116.9 1.7 1.1e-33 116.7 1.7 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Glyco_transf_4 PF13439.6 gi|91774274|ref|YP_566966.1| - 0.029 14.4 0.0 0.04 13.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Chorismate_bind PF00425.18 gi|91774275|ref|YP_566967.1| - 3.4e-95 318.5 0.0 2.3e-92 309.2 0.0 2.9 3 0 0 3 3 3 2 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|91774275|ref|YP_566967.1| - 8.6e-24 84.4 0.1 3e-22 79.4 0.0 2.9 3 0 0 3 3 3 1 Anthranilate synthase component I, N terminal region GATase PF00117.28 gi|91774276|ref|YP_566968.1| - 4.5e-45 153.8 0.0 5e-45 153.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|91774276|ref|YP_566968.1| - 2.7e-17 63.3 0.1 6.9e-17 61.9 0.1 1.6 1 1 0 1 1 1 1 Peptidase C26 AAA_18 PF13238.6 gi|91774277|ref|YP_566969.1| - 7.3e-24 84.8 0.1 1e-23 84.3 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|91774277|ref|YP_566969.1| - 5.9e-05 23.5 0.2 0.0016 18.8 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|91774277|ref|YP_566969.1| - 0.00015 22.1 0.3 0.00034 20.9 0.1 1.8 1 1 1 2 2 2 1 AAA domain CoaE PF01121.20 gi|91774277|ref|YP_566969.1| - 0.00038 20.2 0.1 0.0014 18.4 0.0 1.9 2 0 0 2 2 2 1 Dephospho-CoA kinase AAA_33 PF13671.6 gi|91774277|ref|YP_566969.1| - 0.006 16.7 0.3 0.13 12.4 0.0 2.1 1 1 1 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|91774277|ref|YP_566969.1| - 0.026 14.2 0.2 0.042 13.6 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|91774277|ref|YP_566969.1| - 0.033 14.5 0.0 0.064 13.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|91774277|ref|YP_566969.1| - 0.037 13.0 0.3 0.38 9.7 0.1 2.1 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PRK PF00485.18 gi|91774277|ref|YP_566969.1| - 0.076 12.7 0.1 0.29 10.9 0.0 1.9 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Sigma54_activ_2 PF14532.6 gi|91774277|ref|YP_566969.1| - 0.084 13.0 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA PF00004.29 gi|91774277|ref|YP_566969.1| - 0.098 13.1 0.2 0.28 11.6 0.2 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|91774277|ref|YP_566969.1| - 0.13 12.3 0.0 0.31 11.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|91774277|ref|YP_566969.1| - 0.14 12.5 0.2 0.26 11.7 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.6 gi|91774277|ref|YP_566969.1| - 0.44 10.9 1.8 0.62 10.4 0.6 1.9 1 1 1 2 2 2 0 AAA domain tRNA_anti-like PF12869.7 gi|91774279|ref|YP_566971.1| - 0.0051 16.4 2.3 0.016 14.8 2.3 1.8 1 1 0 1 1 1 1 tRNA_anti-like Slp PF03843.13 gi|91774279|ref|YP_566971.1| - 0.04 13.3 0.1 0.27 10.6 0.0 2.0 2 0 0 2 2 2 0 Outer membrane lipoprotein Slp family LPAM_1 PF08139.12 gi|91774279|ref|YP_566971.1| - 0.06 13.9 0.9 0.14 12.7 0.9 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF5018 PF16410.5 gi|91774279|ref|YP_566971.1| - 0.065 11.9 0.0 0.088 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5018) CTP_transf_like PF01467.26 gi|91774280|ref|YP_566972.1| - 1.5e-18 67.3 0.2 2.2e-17 63.6 0.2 2.0 1 1 0 1 1 1 1 Cytidylyltransferase-like ATP-sulfurylase PF01747.17 gi|91774280|ref|YP_566972.1| - 0.051 13.0 0.2 1.5 8.3 0.0 2.1 1 1 0 2 2 2 0 ATP-sulfurylase HIGH_NTase1 PF05636.11 gi|91774280|ref|YP_566972.1| - 0.087 12.0 0.0 2.8 7.0 0.1 2.0 2 0 0 2 2 2 0 HIGH Nucleotidyl Transferase Citrate_ly_lig PF08218.11 gi|91774280|ref|YP_566972.1| - 0.12 12.0 0.0 0.62 9.7 0.0 2.0 1 1 0 1 1 1 0 Citrate lyase ligase C-terminal domain FAD_syn PF06574.12 gi|91774280|ref|YP_566972.1| - 0.13 12.1 0.1 0.21 11.5 0.1 1.3 1 0 0 1 1 1 0 FAD synthetase FrhB_FdhB_C PF04432.13 gi|91774281|ref|YP_566973.1| - 9.4e-37 126.2 0.0 2.1e-36 125.1 0.0 1.6 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|91774281|ref|YP_566973.1| - 2.8e-15 56.2 0.0 4.8e-15 55.5 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.27 gi|91774281|ref|YP_566973.1| - 1.6e-09 37.2 18.3 4.7e-08 32.5 5.3 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|91774281|ref|YP_566973.1| - 6e-09 35.9 8.1 9.7e-06 25.6 0.5 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91774281|ref|YP_566973.1| - 2.9e-07 31.0 9.2 2.9e-07 31.0 9.2 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91774281|ref|YP_566973.1| - 5.8e-07 29.6 10.4 7.8e-07 29.2 7.8 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|91774281|ref|YP_566973.1| - 3.7e-06 26.7 17.4 1.9e-05 24.5 4.1 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|91774281|ref|YP_566973.1| - 5.5e-05 24.0 13.5 9.4e-05 23.3 10.8 2.6 2 1 0 2 2 1 1 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|91774281|ref|YP_566973.1| - 0.00033 20.6 21.4 0.00045 20.2 4.9 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|91774281|ref|YP_566973.1| - 0.00072 19.6 26.1 0.0039 17.3 14.9 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|91774281|ref|YP_566973.1| - 0.0008 19.7 1.9 0.0008 19.7 1.9 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|91774281|ref|YP_566973.1| - 0.0013 19.2 8.1 0.0013 19.2 8.1 2.1 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91774281|ref|YP_566973.1| - 0.0045 17.5 10.6 0.016 15.7 9.2 2.5 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|91774281|ref|YP_566973.1| - 0.0073 17.0 4.4 0.31 11.8 0.4 2.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain CTP_transf_like PF01467.26 gi|91774281|ref|YP_566973.1| - 0.021 15.0 0.0 0.034 14.3 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase-like Fer4_13 PF13370.6 gi|91774281|ref|YP_566973.1| - 0.077 13.6 10.3 0.42 11.2 3.8 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Phage-tail_2 PF09096.10 gi|91774281|ref|YP_566973.1| - 0.14 12.1 0.0 0.39 10.7 0.0 1.7 2 0 0 2 2 2 0 Baseplate structural protein, domain 2 Fer4_3 PF12798.7 gi|91774281|ref|YP_566973.1| - 9.1 7.5 28.8 0.35 11.9 8.5 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain Bac_luciferase PF00296.20 gi|91774282|ref|YP_566974.1| - 2.3e-62 211.2 0.0 2.9e-62 210.9 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase PHP PF02811.19 gi|91774282|ref|YP_566974.1| - 0.014 15.7 0.0 0.015 15.6 0.0 1.3 1 0 0 1 1 1 0 PHP domain DUF2180 PF09947.9 gi|91774283|ref|YP_566975.1| - 2.6e-31 107.4 11.5 3e-31 107.2 11.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) zf-UBP_var PF17807.1 gi|91774283|ref|YP_566975.1| - 0.0062 16.3 0.6 0.013 15.3 0.6 1.4 1 0 0 1 1 1 1 Variant UBP zinc finger zf-AN1 PF01428.16 gi|91774283|ref|YP_566975.1| - 0.028 14.6 9.9 0.075 13.2 1.6 2.3 2 1 0 2 2 2 0 AN1-like Zinc finger TackOD1 PF18551.1 gi|91774283|ref|YP_566975.1| - 0.41 10.3 6.4 0.34 10.6 0.8 2.0 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 Transp_Tc5_C PF04236.15 gi|91774283|ref|YP_566975.1| - 1.4 9.3 8.2 10 6.6 2.2 2.3 2 1 0 2 2 2 0 Tc5 transposase C-terminal domain FYVE PF01363.21 gi|91774283|ref|YP_566975.1| - 1.7 8.8 7.0 4.1 7.6 7.0 1.7 1 1 0 1 1 1 0 FYVE zinc finger DUF2180 PF09947.9 gi|91774284|ref|YP_566976.1| - 1.5e-26 92.2 5.8 1.6e-26 92.0 5.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) Tnp_zf-ribbon_2 PF13842.6 gi|91774284|ref|YP_566976.1| - 6.6e-05 23.6 4.5 0.00093 20.0 1.1 2.1 2 0 0 2 2 2 1 DDE_Tnp_1-like zinc-ribbon FYVE PF01363.21 gi|91774284|ref|YP_566976.1| - 0.006 16.7 3.6 0.016 15.3 3.6 1.7 1 1 0 1 1 1 1 FYVE zinc finger zf-BED PF02892.15 gi|91774284|ref|YP_566976.1| - 0.8 9.8 8.5 11 6.1 0.1 2.8 2 1 0 2 2 2 0 BED zinc finger Transp_Tc5_C PF04236.15 gi|91774284|ref|YP_566976.1| - 0.99 9.8 5.3 0.57 10.6 2.1 1.9 2 0 0 2 2 2 0 Tc5 transposase C-terminal domain zf-H2C2_2 PF13465.6 gi|91774284|ref|YP_566976.1| - 9.3 6.9 7.7 1.5 9.3 0.3 2.5 3 0 0 3 3 3 0 Zinc-finger double domain CMD PF02627.20 gi|91774285|ref|YP_566977.1| - 2.4e-17 62.7 0.2 3.1e-17 62.4 0.2 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family PA26 PF04636.13 gi|91774285|ref|YP_566977.1| - 0.029 13.3 0.0 0.033 13.1 0.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SapB_1 PF05184.15 gi|91774285|ref|YP_566977.1| - 0.066 13.3 1.8 0.2 11.7 1.3 2.1 2 1 0 2 2 2 0 Saposin-like type B, region 1 UXS1_N PF11803.8 gi|91774285|ref|YP_566977.1| - 0.14 12.5 0.0 0.43 11.0 0.0 1.7 2 0 0 2 2 2 0 UDP-glucuronate decarboxylase N-terminal Cytochrome_C554 PF13435.6 gi|91774286|ref|YP_566978.1| - 3.4e-09 37.5 4.4 7.5e-07 30.0 0.8 2.5 2 0 0 2 2 2 2 Cytochrome c554 and c-prime Cytochrome_C7 PF14522.6 gi|91774286|ref|YP_566978.1| - 6.4e-06 26.1 10.3 0.0081 16.1 4.0 3.2 1 1 2 3 3 3 3 Cytochrome c7 and related cytochrome c Paired_CXXCH_1 PF09699.10 gi|91774286|ref|YP_566978.1| - 0.001 18.7 14.4 0.081 12.7 2.4 4.4 3 2 1 4 4 4 2 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_c3_2 PF14537.6 gi|91774286|ref|YP_566978.1| - 0.017 15.5 15.1 3.4 8.2 3.0 3.8 1 1 1 3 3 3 0 Cytochrome c3 Cytochrom_C552 PF02335.15 gi|91774286|ref|YP_566978.1| - 0.022 13.7 0.4 0.022 13.7 0.4 2.7 2 1 1 3 3 3 0 Cytochrome c552 DZR PF12773.7 gi|91774286|ref|YP_566978.1| - 0.095 12.7 7.2 1.4 9.0 0.2 3.4 3 1 0 3 3 3 0 Double zinc ribbon C1_1 PF00130.22 gi|91774286|ref|YP_566978.1| - 0.11 12.4 5.3 1.5 8.7 0.1 3.4 3 1 0 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Cytochrome_CBB3 PF13442.6 gi|91774286|ref|YP_566978.1| - 0.77 10.1 18.5 16 5.9 0.0 5.3 1 1 4 5 5 5 0 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_NNT PF03264.14 gi|91774286|ref|YP_566978.1| - 1.7 8.3 13.7 1.9 8.2 0.2 3.4 2 1 2 4 4 4 0 NapC/NirT cytochrome c family, N-terminal region zinc_ribbon_2 PF13240.6 gi|91774286|ref|YP_566978.1| - 6.1 6.7 6.4 5.5 6.9 0.2 3.3 3 0 0 3 3 3 0 zinc-ribbon domain FMN_red PF03358.15 gi|91774287|ref|YP_566979.1| - 1.9e-34 118.6 0.0 2.5e-34 118.3 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|91774287|ref|YP_566979.1| - 2.1e-06 27.6 0.0 3.1e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|91774287|ref|YP_566979.1| - 0.047 13.9 0.0 0.088 13.0 0.0 1.5 1 0 0 1 1 1 0 Flavodoxin domain NAD_binding_1 PF00175.21 gi|91774288|ref|YP_566980.1| - 1.8e-20 73.6 0.0 2.6e-20 73.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|91774288|ref|YP_566980.1| - 2.1e-13 50.5 0.0 2.9e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 gi|91774288|ref|YP_566980.1| - 2.4e-06 27.8 0.0 0.00043 20.4 0.0 2.2 2 0 0 2 2 2 2 Ferric reductase NAD binding domain FAD_binding_8 PF08022.12 gi|91774288|ref|YP_566980.1| - 8.3e-06 25.9 0.0 1.5e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 FAD-binding domain TTR-52 PF01060.23 gi|91774288|ref|YP_566980.1| - 0.062 14.0 0.0 0.12 13.1 0.0 1.5 1 0 0 1 1 1 0 Transthyretin-like family Rubrerythrin PF02915.17 gi|91774289|ref|YP_566981.1| - 5.7e-33 114.2 4.7 7e-33 113.9 4.7 1.1 1 0 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|91774289|ref|YP_566981.1| - 2e-09 37.5 0.9 2.8e-09 37.0 0.9 1.2 1 0 0 1 1 1 1 Ferritin-like domain DUF892 PF05974.12 gi|91774289|ref|YP_566981.1| - 0.0012 18.9 2.8 0.027 14.5 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF892) Ferritin_2 PF13668.6 gi|91774289|ref|YP_566981.1| - 0.0067 16.6 1.1 0.012 15.8 1.1 1.4 1 1 0 1 1 1 1 Ferritin-like domain DUF3231 PF11553.8 gi|91774289|ref|YP_566981.1| - 0.05 13.2 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3231) HypA PF01155.19 gi|91774289|ref|YP_566981.1| - 0.051 13.6 0.0 0.092 12.8 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-TFIIB PF13453.6 gi|91774289|ref|YP_566981.1| - 0.057 12.8 0.3 5.4 6.4 0.1 2.3 2 0 0 2 2 2 0 Transcription factor zinc-finger HalOD2 PF18547.1 gi|91774289|ref|YP_566981.1| - 0.1 12.5 6.6 0.18 11.7 0.4 2.6 2 1 1 3 3 3 0 Halobacterial output domain 2 Zn-ribbon_8 PF09723.10 gi|91774289|ref|YP_566981.1| - 0.21 11.8 1.7 0.5 10.5 1.7 1.6 1 0 0 1 1 1 0 Zinc ribbon domain RNA_POL_M_15KD PF02150.16 gi|91774289|ref|YP_566981.1| - 0.34 10.8 0.0 0.34 10.8 0.0 1.8 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit DNA_ligase_ZBD PF03119.16 gi|91774289|ref|YP_566981.1| - 1.6 8.8 4.9 6.1 7.0 0.2 2.4 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Rubredoxin_2 PF18073.1 gi|91774289|ref|YP_566981.1| - 2.4 8.0 7.0 0.83 9.4 0.5 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Flavoprotein PF02441.19 gi|91774290|ref|YP_566982.1| - 4.3e-17 62.3 0.0 7.4e-17 61.6 0.0 1.4 1 0 0 1 1 1 1 Flavoprotein Inos-1-P_synth PF01658.17 gi|91774291|ref|YP_566983.1| - 1.2e-33 115.6 0.0 2e-33 114.9 0.0 1.3 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase NAD_binding_5 PF07994.12 gi|91774291|ref|YP_566983.1| - 0.059 12.7 0.0 0.12 11.7 0.0 1.7 2 1 0 2 2 2 0 Myo-inositol-1-phosphate synthase Flavodoxin_1 PF00258.25 gi|91774292|ref|YP_566984.1| - 1e-12 48.5 0.0 1.6e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin Lactamase_B PF00753.27 gi|91774292|ref|YP_566984.1| - 7.6e-10 39.1 0.0 1.1e-09 38.5 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|91774292|ref|YP_566984.1| - 5.1e-06 26.2 0.0 1.1e-05 25.0 0.0 1.6 2 0 0 2 2 2 1 Beta-lactamase superfamily domain FeThRed_B PF02943.15 gi|91774293|ref|YP_566985.1| - 2.6e-17 62.8 3.0 2.8e-17 62.7 3.0 1.0 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain 2-Hacid_dh_C PF02826.19 gi|91774294|ref|YP_566986.1| - 8.2e-61 204.4 0.1 1.3e-60 203.8 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|91774294|ref|YP_566986.1| - 5.6e-40 136.1 2.9 2.1e-39 134.3 1.0 2.2 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 gi|91774294|ref|YP_566986.1| - 1.7e-05 24.4 0.1 8e-05 22.3 0.1 2.3 1 0 0 1 1 1 1 ACT domain IlvN PF07991.12 gi|91774294|ref|YP_566986.1| - 4.6e-05 23.0 0.5 0.00012 21.7 0.0 1.9 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 gi|91774294|ref|YP_566986.1| - 9.8e-05 22.6 1.5 0.00022 21.4 0.2 2.2 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|91774294|ref|YP_566986.1| - 0.066 13.8 1.2 0.66 10.6 0.0 3.2 3 1 1 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent DUF2240 PF09999.9 gi|91774296|ref|YP_566988.1| - 1.3e-53 180.6 0.0 1.4e-53 180.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) Ribosomal_L18 PF17135.4 gi|91774297|ref|YP_566989.1| - 1.3e-12 47.6 0.0 1.5e-12 47.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|91774297|ref|YP_566989.1| - 1.7e-07 32.0 0.4 4e-07 30.7 0.4 1.8 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L13 PF00572.18 gi|91774298|ref|YP_566990.1| - 7.8e-12 45.5 0.0 1.1e-09 38.6 0.0 2.2 1 1 0 1 1 1 1 Ribosomal protein L13 Ribosomal_S9 PF00380.19 gi|91774299|ref|YP_566991.1| - 1.3e-33 116.1 0.2 1.5e-33 115.9 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 F_bP_aldolase PF01116.20 gi|91774299|ref|YP_566991.1| - 0.12 11.9 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Fructose-bisphosphate aldolase class-II RNA_pol_N PF01194.17 gi|91774300|ref|YP_566992.1| - 7.2e-28 96.7 0.3 7.9e-28 96.5 0.3 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit RNA_pol_Rpb6 PF01192.22 gi|91774301|ref|YP_566993.1| - 1.5e-10 40.8 0.1 1.7e-10 40.7 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 DUF4026 PF13218.6 gi|91774301|ref|YP_566993.1| - 0.083 11.9 0.0 0.089 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4026) Ribosomal_S2 PF00318.20 gi|91774302|ref|YP_566994.1| - 1.4e-24 86.5 0.4 3.8e-15 55.7 0.3 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 Peripla_BP_4 PF13407.6 gi|91774302|ref|YP_566994.1| - 0.13 11.8 0.2 0.21 11.1 0.2 1.3 1 0 0 1 1 1 0 Periplasmic binding protein domain Memo PF01875.17 gi|91774303|ref|YP_566995.1| - 5.4e-76 255.3 0.0 6.1e-76 255.1 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.18 gi|91774303|ref|YP_566995.1| - 3.1e-06 26.5 0.0 6.3e-06 25.5 0.0 1.4 1 1 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase GATase PF00117.28 gi|91774303|ref|YP_566995.1| - 0.072 12.8 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Glutamine amidotransferase class-I GHMP_kinases_N PF00288.26 gi|91774304|ref|YP_566996.1| - 6.6e-18 64.7 0.1 1.4e-17 63.7 0.1 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|91774304|ref|YP_566996.1| - 7.1e-14 51.9 1.1 2e-13 50.5 0.4 1.9 2 0 0 2 2 2 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.9 gi|91774304|ref|YP_566996.1| - 0.00094 18.7 0.1 0.0026 17.3 0.1 1.8 1 0 0 1 1 1 1 Galactokinase galactose-binding signature SpoIIE PF07228.12 gi|91774304|ref|YP_566996.1| - 0.069 13.1 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) AA_kinase PF00696.28 gi|91774305|ref|YP_566997.1| - 1.6e-40 139.2 2.5 1.9e-40 139.0 2.5 1.0 1 0 0 1 1 1 1 Amino acid kinase family FMN_dh PF01070.18 gi|91774306|ref|YP_566998.1| - 1.9e-28 99.5 1.4 4.1e-26 91.8 1.4 2.1 1 1 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|91774306|ref|YP_566998.1| - 4.7e-07 29.1 9.4 0.014 14.4 0.1 3.6 2 2 1 3 3 3 3 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 gi|91774306|ref|YP_566998.1| - 0.00016 21.2 0.1 0.00016 21.2 0.1 2.1 3 0 0 3 3 3 1 Nitronate monooxygenase Glu_synthase PF01645.17 gi|91774306|ref|YP_566998.1| - 0.0082 15.3 0.9 0.017 14.3 0.9 1.6 1 1 0 1 1 1 1 Conserved region in glutamate synthase DHO_dh PF01180.21 gi|91774306|ref|YP_566998.1| - 0.023 13.9 1.6 0.5 9.5 0.0 2.8 4 0 0 4 4 4 0 Dihydroorotate dehydrogenase Lactamase_B_2 PF12706.7 gi|91774307|ref|YP_566999.1| - 1.2e-09 38.0 1.6 4.3e-09 36.2 0.1 2.1 2 0 0 2 2 2 1 Beta-lactamase superfamily domain RMMBL PF07521.12 gi|91774307|ref|YP_566999.1| - 9.9e-09 35.0 0.4 4.1e-08 33.0 0.1 2.1 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|91774307|ref|YP_566999.1| - 9.8e-08 32.2 2.0 4.6e-07 30.0 2.0 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Nkap_C PF06047.11 gi|91774307|ref|YP_566999.1| - 0.0061 16.7 0.0 0.016 15.3 0.0 1.7 1 0 0 1 1 1 1 NF-kappa-B-activating protein C-terminal domain polyprenyl_synt PF00348.17 gi|91774308|ref|YP_567000.1| - 5.5e-69 232.1 0.0 7.1e-69 231.7 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase SPO22 PF08631.10 gi|91774308|ref|YP_567000.1| - 0.12 11.9 0.0 0.23 10.9 0.0 1.5 1 0 0 1 1 1 0 Meiosis protein SPO22/ZIP4 like DUF1131 PF06572.12 gi|91774308|ref|YP_567000.1| - 0.19 11.5 0.0 0.33 10.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1131) T2SSE PF00437.20 gi|91774309|ref|YP_567001.1| - 3.2e-41 141.2 0.0 6e-41 140.3 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|91774309|ref|YP_567001.1| - 0.2 11.4 0.4 0.52 10.1 0.0 1.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain T2SSF PF00482.23 gi|91774310|ref|YP_567002.1| - 1.8e-34 118.4 4.4 5.6e-16 58.6 2.5 3.1 2 0 0 2 2 2 2 Type II secretion system (T2SS), protein F DUF1279 PF06916.13 gi|91774310|ref|YP_567002.1| - 0.011 16.3 1.8 3.2 8.4 0.4 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1279) Arylsulfotrans PF05935.11 gi|91774311|ref|YP_567003.1| - 0.0032 16.4 0.2 0.0083 15.1 0.0 1.7 2 0 0 2 2 2 1 Arylsulfotransferase (ASST) Pilin_N PF07790.11 gi|91774311|ref|YP_567003.1| - 0.037 15.0 1.3 0.13 13.2 0.6 2.2 2 0 0 2 2 2 0 Archaeal Type IV pilin, N-terminal HATPase_c PF02518.26 gi|91774312|ref|YP_567004.1| - 2.2e-33 115.1 1.3 2.4e-33 115.0 0.1 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|91774312|ref|YP_567004.1| - 1.3e-18 66.8 0.1 2.5e-18 65.9 0.1 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 gi|91774312|ref|YP_567004.1| - 4.1e-09 36.6 0.1 1.1e-08 35.2 0.1 1.8 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|91774312|ref|YP_567004.1| - 4.7e-08 33.3 0.0 7.2e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS PF00989.25 gi|91774312|ref|YP_567004.1| - 5.4e-08 32.8 0.0 1.3e-07 31.6 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|91774312|ref|YP_567004.1| - 7.1e-07 29.1 0.0 1.4e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 PAS domain HATPase_c_2 PF13581.6 gi|91774312|ref|YP_567004.1| - 0.00054 19.9 0.0 0.0013 18.7 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 gi|91774312|ref|YP_567004.1| - 0.00085 19.2 0.0 0.0023 17.8 0.0 1.7 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.6 gi|91774312|ref|YP_567004.1| - 0.003 17.4 0.2 0.0084 15.9 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1216 PF06746.11 gi|91774312|ref|YP_567004.1| - 0.039 14.0 0.5 0.088 12.8 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1216) Radical_SAM PF04055.21 gi|91774313|ref|YP_567005.1| - 8.2e-20 71.8 0.0 8.2e-20 71.8 0.0 2.6 3 0 0 3 3 2 1 Radical SAM superfamily DZR PF12773.7 gi|91774313|ref|YP_567005.1| - 0.015 15.3 0.2 0.015 15.3 0.2 2.8 3 0 0 3 3 3 0 Double zinc ribbon GFA PF04828.14 gi|91774313|ref|YP_567005.1| - 0.04 14.2 0.9 6 7.3 0.4 3.5 2 1 0 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Fer4_12 PF13353.6 gi|91774313|ref|YP_567005.1| - 0.044 14.1 2.0 0.13 12.5 0.0 2.6 3 0 0 3 3 3 0 4Fe-4S single cluster domain Prismane PF03063.20 gi|91774313|ref|YP_567005.1| - 0.11 11.1 0.1 0.13 10.9 0.1 1.2 1 0 0 1 1 1 0 Prismane/CO dehydrogenase family zf_C2H2_13 PF18508.1 gi|91774313|ref|YP_567005.1| - 0.45 10.1 8.7 1.7 8.3 0.0 2.9 3 0 0 3 3 3 0 Zinc finger domain Elf1 PF05129.13 gi|91774313|ref|YP_567005.1| - 0.73 9.9 4.6 24 5.1 0.1 3.2 3 0 0 3 3 3 0 Transcription elongation factor Elf1 like Ogr_Delta PF04606.12 gi|91774313|ref|YP_567005.1| - 0.98 9.5 0.1 0.98 9.5 0.1 3.0 3 0 0 3 3 3 0 Ogr/Delta-like zinc finger Nudix_N_2 PF14803.6 gi|91774313|ref|YP_567005.1| - 1 9.4 7.6 1.4 8.9 0.2 3.3 3 0 0 3 3 3 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|91774313|ref|YP_567005.1| - 1.1 9.1 14.4 0.99 9.2 0.8 3.5 3 0 0 3 3 3 0 zinc-ribbon domain DiS_P_DiS PF06750.13 gi|91774313|ref|YP_567005.1| - 4.5 7.5 7.4 2.8 8.1 0.4 3.1 3 1 0 3 3 3 0 Bacterial Peptidase A24 N-terminal domain zf-ribbon_3 PF13248.6 gi|91774313|ref|YP_567005.1| - 4.6 6.8 17.9 0.62 9.5 0.2 3.7 4 0 0 4 4 4 0 zinc-ribbon domain HTH_5 PF01022.20 gi|91774314|ref|YP_567006.1| - 2.4e-12 46.5 1.9 3.9e-12 45.8 1.9 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|91774314|ref|YP_567006.1| - 2.2e-08 34.1 0.0 2.8e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|91774314|ref|YP_567006.1| - 5.8e-05 23.2 0.1 9e-05 22.6 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain SMC_ScpB PF04079.16 gi|91774314|ref|YP_567006.1| - 0.0025 17.5 0.0 0.003 17.2 0.0 1.1 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB Penicillinase_R PF03965.16 gi|91774314|ref|YP_567006.1| - 0.0034 17.7 0.0 0.0055 17.0 0.0 1.4 1 0 0 1 1 1 1 Penicillinase repressor DUF1700 PF08006.11 gi|91774314|ref|YP_567006.1| - 0.025 14.1 0.1 0.027 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) TrmB PF01978.19 gi|91774314|ref|YP_567006.1| - 0.026 14.4 0.0 0.046 13.6 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB OFeT_1 PF16955.5 gi|91774314|ref|YP_567006.1| - 0.026 14.2 0.2 0.032 13.9 0.2 1.1 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter RP-C PF03428.13 gi|91774314|ref|YP_567006.1| - 0.028 14.1 0.0 0.039 13.6 0.0 1.3 1 1 0 1 1 1 0 Replication protein C N-terminal domain HTH_24 PF13412.6 gi|91774314|ref|YP_567006.1| - 0.034 13.7 0.1 0.64 9.6 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|91774314|ref|YP_567006.1| - 0.059 13.9 0.0 0.11 13.0 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR PF01047.22 gi|91774314|ref|YP_567006.1| - 0.063 13.2 0.1 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 MarR family DUF1495 PF07381.11 gi|91774314|ref|YP_567006.1| - 0.082 12.7 0.2 0.96 9.3 0.0 2.3 1 1 2 3 3 3 0 Winged helix DNA-binding domain (DUF1495) Rio2_N PF09202.11 gi|91774314|ref|YP_567006.1| - 0.11 12.8 0.1 0.3 11.3 0.0 1.7 2 0 0 2 2 2 0 Rio2, N-terminal MarR_2 PF12802.7 gi|91774314|ref|YP_567006.1| - 0.16 11.9 0.0 0.27 11.2 0.0 1.3 1 0 0 1 1 1 0 MarR family CTP_transf_1 PF01148.20 gi|91774315|ref|YP_567007.1| - 0.00017 21.4 8.9 0.00053 19.8 8.6 1.8 1 1 0 1 1 1 1 Cytidylyltransferase family DUF2061 PF09834.9 gi|91774315|ref|YP_567007.1| - 0.0015 19.0 1.8 0.0015 19.0 1.8 2.5 2 0 0 2 2 2 1 Predicted membrane protein (DUF2061) Glyco_trans_1_3 PF13528.6 gi|91774316|ref|YP_567008.1| - 2e-18 66.8 0.0 1.6e-08 34.2 0.0 2.2 2 1 0 2 2 2 2 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.16 gi|91774316|ref|YP_567008.1| - 6.6e-14 52.2 0.0 1.1e-13 51.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain UDPGT PF00201.18 gi|91774316|ref|YP_567008.1| - 3.3e-06 26.2 0.0 5.7e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_transf_4 PF13439.6 gi|91774316|ref|YP_567008.1| - 2.8e-05 24.2 0.0 7.3e-05 22.8 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_transf_28 PF03033.20 gi|91774316|ref|YP_567008.1| - 0.00031 20.8 0.0 0.00059 19.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Glyco_trans_1_4 PF13692.6 gi|91774316|ref|YP_567008.1| - 0.00045 20.7 0.0 0.00074 19.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Mito_fiss_Elm1 PF06258.11 gi|91774316|ref|YP_567008.1| - 0.09 11.9 0.0 2.2 7.3 0.0 2.2 2 0 0 2 2 2 0 Mitochondrial fission ELM1 Glycos_transf_1 PF00534.20 gi|91774316|ref|YP_567008.1| - 0.091 12.3 0.0 0.19 11.2 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|91774316|ref|YP_567008.1| - 0.11 12.9 0.0 0.32 11.4 0.0 1.7 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain PAP2_3 PF14378.6 gi|91774317|ref|YP_567009.1| - 8.7e-15 54.9 16.4 6.3e-14 52.1 16.4 2.2 1 1 0 1 1 1 1 PAP2 superfamily PAP2 PF01569.21 gi|91774317|ref|YP_567009.1| - 2e-09 37.3 5.6 2e-09 37.3 5.6 2.1 1 1 1 2 2 2 1 PAP2 superfamily DUF973 PF06157.11 gi|91774317|ref|YP_567009.1| - 0.6 9.1 12.7 0.14 11.2 3.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF973) PAP2_C PF14360.6 gi|91774317|ref|YP_567009.1| - 2.8 8.5 11.0 0.33 11.5 4.4 2.4 2 0 0 2 2 2 0 PAP2 superfamily C-terminal LPG_synthase_TM PF03706.13 gi|91774318|ref|YP_567010.1| - 6.1e-45 154.0 31.1 7.9e-45 153.7 31.1 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region DUF2209 PF09974.9 gi|91774319|ref|YP_567011.1| - 1.1e-50 171.0 0.3 1.3e-50 170.8 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2209) GTP-bdg_N PF13167.6 gi|91774320|ref|YP_567012.1| - 9.8e-27 93.5 0.2 1.9e-26 92.5 0.2 1.5 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal MMR_HSR1 PF01926.23 gi|91774320|ref|YP_567012.1| - 8.9e-20 70.9 0.1 2.5e-19 69.4 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|91774320|ref|YP_567012.1| - 5.4e-12 46.1 0.2 9.7e-12 45.3 0.2 1.4 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region FeoB_N PF02421.18 gi|91774320|ref|YP_567012.1| - 1.6e-06 27.7 0.2 5.7e-06 25.9 0.0 2.0 2 0 0 2 2 2 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|91774320|ref|YP_567012.1| - 7.2e-06 25.7 0.1 0.00073 19.1 0.1 2.6 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|91774320|ref|YP_567012.1| - 0.0001 22.3 0.0 0.57 10.1 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1_Xtn PF16897.5 gi|91774320|ref|YP_567012.1| - 0.00011 22.1 0.0 0.0003 20.8 0.0 1.7 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Arf PF00025.21 gi|91774320|ref|YP_567012.1| - 0.0039 16.6 0.0 0.0086 15.5 0.0 1.6 1 0 0 1 1 1 1 ADP-ribosylation factor family AAA_18 PF13238.6 gi|91774320|ref|YP_567012.1| - 0.007 16.9 0.2 0.084 13.4 0.0 2.6 3 0 0 3 3 3 1 AAA domain Dynamin_N PF00350.23 gi|91774320|ref|YP_567012.1| - 0.095 12.7 0.1 0.43 10.6 0.0 2.0 1 1 1 2 2 2 0 Dynamin family PduV-EutP PF10662.9 gi|91774320|ref|YP_567012.1| - 0.17 11.6 0.1 3.2 7.5 0.0 2.8 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation PHP_C PF13263.6 gi|91774321|ref|YP_567013.1| - 1.4e-18 66.4 0.0 2.6e-18 65.5 0.0 1.5 1 0 0 1 1 1 1 PHP-associated PHP PF02811.19 gi|91774321|ref|YP_567013.1| - 5.3e-06 26.8 0.0 8.3e-06 26.2 0.0 1.4 1 1 0 1 1 1 1 PHP domain AI-2E_transport PF01594.16 gi|91774322|ref|YP_567014.1| - 4.9e-39 134.4 50.6 5.8e-39 134.1 50.6 1.0 1 0 0 1 1 1 1 AI-2E family transporter HATPase_c PF02518.26 gi|91774323|ref|YP_567015.1| - 5.1e-30 104.3 0.2 1.3e-29 103.0 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 gi|91774323|ref|YP_567015.1| - 2.3e-17 63.2 0.7 5e-17 62.1 0.7 1.6 1 0 0 1 1 1 1 Response regulator receiver domain HisKA PF00512.25 gi|91774323|ref|YP_567015.1| - 1.7e-13 50.4 3.6 1.8e-13 50.3 0.5 2.6 2 1 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|91774323|ref|YP_567015.1| - 6.6e-09 36.0 0.0 1.5e-08 34.8 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|91774323|ref|YP_567015.1| - 1.7e-07 31.4 0.1 5.4e-07 29.8 0.1 1.9 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 gi|91774323|ref|YP_567015.1| - 2.1e-05 24.5 0.0 7.3e-05 22.7 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS_3 PF08447.12 gi|91774323|ref|YP_567015.1| - 0.00015 22.0 0.0 0.0004 20.6 0.0 1.8 1 0 0 1 1 1 1 PAS fold HATPase_c_5 PF14501.6 gi|91774323|ref|YP_567015.1| - 0.00028 20.8 0.0 0.00069 19.5 0.0 1.6 1 0 0 1 1 1 1 GHKL domain PAS_8 PF13188.7 gi|91774323|ref|YP_567015.1| - 0.00082 19.3 0.0 0.0028 17.6 0.0 1.9 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 gi|91774323|ref|YP_567015.1| - 0.0088 15.9 0.0 0.019 14.8 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GshA PF08886.11 gi|91774323|ref|YP_567015.1| - 0.13 10.8 0.3 0.31 9.5 0.1 1.6 2 0 0 2 2 2 0 Glutamate-cysteine ligase AA_kinase PF00696.28 gi|91774324|ref|YP_567016.1| - 3e-39 135.1 0.1 4.1e-39 134.6 0.1 1.2 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 gi|91774324|ref|YP_567016.1| - 5.6e-16 58.3 0.3 1e-15 57.4 0.3 1.5 1 0 0 1 1 1 1 PUA domain Aldedh PF00171.22 gi|91774325|ref|YP_567017.1| - 1.2e-19 70.2 0.6 1.1e-14 53.9 0.1 2.5 1 1 1 2 2 2 2 Aldehyde dehydrogenase family DUF3911 PF13050.6 gi|91774325|ref|YP_567017.1| - 0.04 14.0 3.5 5.1 7.3 0.0 3.8 3 1 1 4 4 4 0 Protein of unknown function (DUF3911) MCR_alpha_N PF02745.15 gi|91774326|ref|YP_567018.1| - 4.5e-145 482.0 1.0 5.8e-145 481.7 1.0 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.17 gi|91774326|ref|YP_567018.1| - 1.8e-65 219.1 5.3 1.8e-65 219.1 5.3 2.0 2 0 0 2 2 2 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_gamma PF02240.16 gi|91774327|ref|YP_567019.1| - 1.8e-116 387.6 0.3 2.1e-116 387.5 0.3 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_C PF04609.12 gi|91774328|ref|YP_567020.1| - 6.2e-06 25.5 1.0 1.1e-05 24.7 1.0 1.4 1 1 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C MCR_D PF02505.14 gi|91774329|ref|YP_567021.1| - 1.4e-55 187.0 0.0 1.6e-55 186.9 0.0 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D MCR_beta PF02241.18 gi|91774330|ref|YP_567022.1| - 3.4e-132 439.6 8.6 6.3e-132 438.7 8.6 1.4 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.15 gi|91774330|ref|YP_567022.1| - 7.9e-82 273.3 2.6 7.9e-82 273.3 2.6 1.6 2 0 0 2 2 2 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain Radical_SAM PF04055.21 gi|91774331|ref|YP_567023.1| - 1.5e-14 54.7 6.7 2.2e-12 47.6 5.1 3.3 3 1 0 3 3 3 1 Radical SAM superfamily MIX PF18529.1 gi|91774331|ref|YP_567023.1| - 0.097 12.4 0.1 0.26 11.0 0.0 1.7 2 0 0 2 2 2 0 Mitochondrial membrane-anchored proteins PolC_DP2 PF03833.13 gi|91774332|ref|YP_567024.1| - 0 1328.3 0.0 0 1327.6 0.0 1.3 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 DZR PF12773.7 gi|91774332|ref|YP_567024.1| - 0.18 11.8 19.2 3 8.0 0.4 3.3 2 1 1 3 3 3 0 Double zinc ribbon Lar_restr_allev PF14354.6 gi|91774332|ref|YP_567024.1| - 0.95 9.9 0.0 0.95 9.9 0.0 3.8 3 1 1 4 4 4 0 Restriction alleviation protein Lar HypA PF01155.19 gi|91774332|ref|YP_567024.1| - 2.4 8.2 14.3 2.2 8.3 0.2 3.1 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ribosomal_L32p PF01783.23 gi|91774332|ref|YP_567024.1| - 6.9 7.0 9.7 3.5 8.0 2.4 3.2 3 0 0 3 3 3 0 Ribosomal L32p protein family TerY_C PF15616.6 gi|91774332|ref|YP_567024.1| - 7.9 6.6 10.3 0.59 10.3 4.0 2.2 2 0 0 2 2 2 0 TerY-C metal binding domain PYC_OADA PF02436.18 gi|91774334|ref|YP_567026.1| - 4.5e-57 193.0 0.3 8.1e-57 192.2 0.3 1.4 1 0 0 1 1 1 1 Conserved carboxylase domain HMGL-like PF00682.19 gi|91774334|ref|YP_567026.1| - 2.8e-50 171.3 0.0 4e-50 170.8 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.22 gi|91774334|ref|YP_567026.1| - 7.3e-15 54.6 5.2 7.3e-15 54.6 5.2 2.0 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|91774334|ref|YP_567026.1| - 8.6e-05 22.3 0.3 0.096 12.5 0.0 2.5 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|91774334|ref|YP_567026.1| - 0.0017 19.1 1.3 1.3 9.8 0.0 3.3 3 0 0 3 3 3 2 HlyD family secretion protein RnfC_N PF13375.6 gi|91774334|ref|YP_567026.1| - 0.0017 18.3 3.2 0.0057 16.6 2.0 2.4 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain HlyD_D23 PF16576.5 gi|91774334|ref|YP_567026.1| - 0.0028 16.9 1.0 0.39 9.9 0.1 2.4 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCV_H PF01597.19 gi|91774334|ref|YP_567026.1| - 2.4 8.1 5.6 3.1 7.7 0.5 2.5 1 1 1 2 2 2 0 Glycine cleavage H-protein CPSase_L_D2 PF02786.17 gi|91774335|ref|YP_567027.1| - 2.5e-79 265.7 0.0 3.8e-79 265.1 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|91774335|ref|YP_567027.1| - 1.6e-47 160.6 0.0 5.5e-47 158.9 0.0 1.9 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|91774335|ref|YP_567027.1| - 1.2e-45 154.0 0.0 2.7e-45 152.9 0.0 1.7 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 gi|91774335|ref|YP_567027.1| - 1.7e-12 47.3 0.1 4.1e-12 46.1 0.1 1.6 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 gi|91774335|ref|YP_567027.1| - 4.7e-07 29.5 0.1 9.3e-07 28.6 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|91774335|ref|YP_567027.1| - 1.8e-06 28.1 0.0 3.5e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|91774335|ref|YP_567027.1| - 1.3e-05 25.1 0.1 2.9e-05 23.9 0.1 1.7 1 1 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RimK PF08443.11 gi|91774335|ref|YP_567027.1| - 0.00035 20.2 0.0 0.0025 17.5 0.0 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|91774335|ref|YP_567027.1| - 0.0087 15.8 0.0 0.019 14.7 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_5 PF13549.6 gi|91774335|ref|YP_567027.1| - 0.027 13.9 0.0 0.058 12.8 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|91774335|ref|YP_567027.1| - 0.039 13.6 0.1 0.073 12.7 0.1 1.5 1 0 0 1 1 1 0 ATP-grasp domain BPL_LplA_LipB PF03099.19 gi|91774336|ref|YP_567028.1| - 6.7e-17 61.6 0.0 4.6e-16 58.9 0.0 2.0 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.12 gi|91774336|ref|YP_567028.1| - 6.5e-12 45.2 0.0 1.4e-11 44.1 0.0 1.6 1 0 0 1 1 1 1 HTH domain BPL_C PF02237.17 gi|91774336|ref|YP_567028.1| - 1.6e-09 37.5 0.9 3.8e-09 36.3 0.9 1.7 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain HTH_24 PF13412.6 gi|91774336|ref|YP_567028.1| - 3.8e-07 29.6 0.0 1.1e-06 28.0 0.0 1.9 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding BPL_LplA_LipB_2 PF16917.5 gi|91774336|ref|YP_567028.1| - 4.6e-07 29.5 0.0 9.4e-07 28.5 0.0 1.4 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family HTH_AsnC-type PF13404.6 gi|91774336|ref|YP_567028.1| - 0.006 16.4 0.0 0.44 10.4 0.0 3.1 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|91774336|ref|YP_567028.1| - 0.0063 16.5 0.0 0.062 13.3 0.0 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|91774336|ref|YP_567028.1| - 0.0097 16.2 0.0 0.071 13.5 0.0 2.2 2 0 0 2 2 2 1 Transcriptional regulator MarR PF01047.22 gi|91774336|ref|YP_567028.1| - 0.09 12.7 0.0 0.22 11.5 0.0 1.7 1 0 0 1 1 1 0 MarR family TrmB PF01978.19 gi|91774336|ref|YP_567028.1| - 0.13 12.1 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB S-layer PF07752.11 gi|91774337|ref|YP_567029.1| - 4.1e-05 22.8 1.8 5.8e-05 22.3 1.8 1.1 1 0 0 1 1 1 1 S-layer protein PspA_IM30 PF04012.12 gi|91774338|ref|YP_567030.1| - 0.0003 20.5 14.5 0.036 13.6 1.2 3.4 2 1 1 3 3 3 2 PspA/IM30 family DUF1664 PF07889.12 gi|91774338|ref|YP_567030.1| - 0.0004 20.4 12.3 0.13 12.3 4.6 3.1 2 2 1 3 3 3 2 Protein of unknown function (DUF1664) DUF3450 PF11932.8 gi|91774338|ref|YP_567030.1| - 0.00056 19.3 11.3 0.25 10.6 5.0 3.2 1 1 2 3 3 3 2 Protein of unknown function (DUF3450) DUF4618 PF15397.6 gi|91774338|ref|YP_567030.1| - 0.0031 17.0 2.1 0.0031 17.0 2.1 3.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4618) IL5 PF02025.15 gi|91774338|ref|YP_567030.1| - 0.012 15.9 2.7 0.17 12.2 0.1 2.5 2 0 0 2 2 2 0 Interleukin 5 Spc29 PF17082.5 gi|91774338|ref|YP_567030.1| - 0.027 14.3 12.3 0.16 11.8 4.8 2.4 2 0 0 2 2 2 0 Spindle Pole Component 29 SlyX PF04102.12 gi|91774338|ref|YP_567030.1| - 0.03 14.9 4.5 1.1 9.9 0.5 3.4 2 1 0 2 2 2 0 SlyX GAS PF13851.6 gi|91774338|ref|YP_567030.1| - 0.03 13.7 24.6 0.058 12.8 11.2 2.3 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF848 PF05852.11 gi|91774338|ref|YP_567030.1| - 0.031 14.4 22.2 0.03 14.4 2.8 3.4 1 1 1 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) Perilipin PF03036.16 gi|91774338|ref|YP_567030.1| - 0.04 13.0 5.8 0.044 12.8 0.9 2.2 2 0 0 2 2 2 0 Perilipin family Laminin_II PF06009.12 gi|91774338|ref|YP_567030.1| - 0.04 13.9 17.2 0.48 10.4 0.8 2.9 1 1 3 4 4 4 0 Laminin Domain II Seryl_tRNA_N PF02403.22 gi|91774338|ref|YP_567030.1| - 0.049 13.9 21.3 0.63 10.3 0.8 4.0 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain NPV_P10 PF05531.12 gi|91774338|ref|YP_567030.1| - 0.057 13.9 9.4 0.5 10.9 1.1 3.3 3 1 1 4 4 3 0 Nucleopolyhedrovirus P10 protein Fez1 PF06818.15 gi|91774338|ref|YP_567030.1| - 0.082 13.3 22.3 0.5 10.8 3.4 2.3 1 1 0 2 2 2 0 Fez1 DUF4527 PF15030.6 gi|91774338|ref|YP_567030.1| - 0.083 12.3 11.8 0.54 9.6 3.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF4527) Baculo_PEP_C PF04513.12 gi|91774338|ref|YP_567030.1| - 0.087 12.9 3.2 29 4.7 0.6 3.1 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Phage_Mu_Gam PF07352.12 gi|91774338|ref|YP_567030.1| - 0.1 12.5 19.1 1.5 8.7 0.1 3.5 2 1 1 3 3 3 0 Bacteriophage Mu Gam like protein Atg14 PF10186.9 gi|91774338|ref|YP_567030.1| - 0.18 10.9 23.3 0.25 10.4 4.3 2.4 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 TetR_C_24 PF17932.1 gi|91774338|ref|YP_567030.1| - 0.18 12.1 1.3 0.87 9.9 0.4 2.6 1 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF4407 PF14362.6 gi|91774338|ref|YP_567030.1| - 0.22 10.9 15.5 1.3e+02 1.7 15.5 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) BLOC1_2 PF10046.9 gi|91774338|ref|YP_567030.1| - 0.23 11.8 12.8 0.65 10.3 0.4 4.0 2 2 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 YabA PF06156.13 gi|91774338|ref|YP_567030.1| - 0.45 11.2 21.3 0.45 11.2 1.2 3.9 3 1 0 3 3 3 0 Initiation control protein YabA APG6_N PF17675.1 gi|91774338|ref|YP_567030.1| - 0.5 10.9 22.9 1.2 9.7 5.6 3.1 1 1 1 3 3 3 0 Apg6 coiled-coil region DUF724 PF05266.14 gi|91774338|ref|YP_567030.1| - 0.51 10.1 23.3 0.9 9.3 8.5 2.8 2 2 1 3 3 3 0 Protein of unknown function (DUF724) DivIC PF04977.15 gi|91774338|ref|YP_567030.1| - 0.58 10.0 13.8 1.1 9.0 2.3 4.1 2 2 2 4 4 4 0 Septum formation initiator Snapin_Pallidin PF14712.6 gi|91774338|ref|YP_567030.1| - 0.68 10.4 13.7 1.9 8.9 4.1 3.6 3 2 0 3 3 2 0 Snapin/Pallidin TPR_MLP1_2 PF07926.12 gi|91774338|ref|YP_567030.1| - 0.69 10.0 20.5 1.4 9.0 9.2 3.7 2 2 0 2 2 2 0 TPR/MLP1/MLP2-like protein 5_nucleotid PF05761.14 gi|91774338|ref|YP_567030.1| - 0.69 8.7 10.2 0.19 10.6 1.8 2.4 1 1 1 2 2 2 0 5' nucleotidase family kleA_kleC PF17383.2 gi|91774338|ref|YP_567030.1| - 0.93 9.9 5.9 2.3 8.6 0.9 3.7 3 2 1 4 4 3 0 Uncharacterized KorC regulated protein A UPF0184 PF03670.13 gi|91774338|ref|YP_567030.1| - 1.1 9.7 10.9 0.44 11.0 1.5 4.0 2 2 3 5 5 5 0 Uncharacterised protein family (UPF0184) HSBP1 PF06825.12 gi|91774338|ref|YP_567030.1| - 1.1 9.1 5.6 33 4.4 0.1 3.8 4 0 0 4 4 3 0 Heat shock factor binding protein 1 DUF4201 PF13870.6 gi|91774338|ref|YP_567030.1| - 1.1 8.9 24.9 4.5 7.0 12.8 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4201) TSC22 PF01166.18 gi|91774338|ref|YP_567030.1| - 1.7 9.0 10.5 1.2 9.5 0.1 4.1 2 2 2 4 4 3 0 TSC-22/dip/bun family MCPsignal PF00015.21 gi|91774338|ref|YP_567030.1| - 1.7 8.4 8.8 6.5 6.5 0.4 3.0 2 1 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain ATG16 PF08614.11 gi|91774338|ref|YP_567030.1| - 2.6 8.2 20.2 1 9.6 5.2 2.7 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF641 PF04859.12 gi|91774338|ref|YP_567030.1| - 3 8.2 17.9 1.8 8.9 2.3 3.2 2 1 1 3 3 3 0 Plant protein of unknown function (DUF641) DUF16 PF01519.16 gi|91774338|ref|YP_567030.1| - 3 8.4 18.1 9.2 6.8 7.5 3.7 1 1 1 2 2 2 0 Protein of unknown function DUF16 YtxH PF12732.7 gi|91774338|ref|YP_567030.1| - 3.4 8.3 14.4 7.1 7.2 0.7 4.3 2 2 1 3 3 3 0 YtxH-like protein ZapB PF06005.12 gi|91774338|ref|YP_567030.1| - 4.4 7.8 20.3 2.1 8.9 1.3 3.9 2 2 0 3 3 3 0 Cell division protein ZapB DUF948 PF06103.11 gi|91774338|ref|YP_567030.1| - 4.5 7.6 10.5 19 5.6 0.1 3.8 3 2 0 4 4 3 0 Bacterial protein of unknown function (DUF948) Occludin_ELL PF07303.13 gi|91774338|ref|YP_567030.1| - 5.7 7.7 16.2 2.6 8.8 1.5 3.9 1 1 2 4 4 4 0 Occludin homology domain DUF2203 PF09969.9 gi|91774338|ref|YP_567030.1| - 6 7.6 16.2 4.4 8.0 0.3 3.9 1 1 3 4 4 4 0 Uncharacterized conserved protein (DUF2203) HAUS-augmin3 PF14932.6 gi|91774338|ref|YP_567030.1| - 8 6.0 17.5 0.51 9.9 2.5 2.8 1 1 2 3 3 3 0 HAUS augmin-like complex subunit 3 Fib_alpha PF08702.10 gi|91774338|ref|YP_567030.1| - 9.8 6.4 20.3 12 6.1 1.2 3.9 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family ATG16 PF08614.11 gi|91774339|ref|YP_567031.1| - 0.023 14.9 13.5 0.045 14.0 0.6 2.1 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF948 PF06103.11 gi|91774339|ref|YP_567031.1| - 0.27 11.5 7.0 11 6.4 0.5 3.3 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Exonuc_VII_L PF02601.15 gi|91774339|ref|YP_567031.1| - 1 8.9 10.6 4 6.9 10.7 1.8 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF4446 PF14584.6 gi|91774339|ref|YP_567031.1| - 1.2 9.2 6.9 1.4 8.9 1.8 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF4446) DHR10 PF18595.1 gi|91774339|ref|YP_567031.1| - 2 8.5 19.2 4.2 7.4 9.6 3.0 2 1 0 2 2 2 0 Designed helical repeat protein 10 domain Cluap1 PF10234.9 gi|91774339|ref|YP_567031.1| - 3.5 6.9 15.9 2.6 7.3 8.6 2.2 1 1 1 2 2 2 0 Clusterin-associated protein-1 DUF724 PF05266.14 gi|91774339|ref|YP_567031.1| - 3.7 7.3 14.6 0.33 10.8 7.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 gi|91774339|ref|YP_567031.1| - 9.1 6.3 19.7 12 5.9 0.9 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF424 PF04242.13 gi|91774340|ref|YP_567032.1| - 4e-32 110.3 0.1 4.5e-32 110.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) MCM PF00493.23 gi|91774341|ref|YP_567033.1| - 4.8e-91 303.8 0.0 6.8e-91 303.3 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|91774341|ref|YP_567033.1| - 5.5e-36 123.2 0.0 9.8e-36 122.4 0.0 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|91774341|ref|YP_567033.1| - 1.7e-27 95.7 0.4 4.4e-27 94.3 0.4 1.8 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 gi|91774341|ref|YP_567033.1| - 4.6e-11 43.2 1.3 1.2e-10 41.9 0.4 2.1 2 0 0 2 2 2 1 MCM N-terminal domain Mg_chelatase PF01078.21 gi|91774341|ref|YP_567033.1| - 5.3e-07 29.2 0.0 0.00014 21.3 0.0 2.4 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|91774341|ref|YP_567033.1| - 1.3e-05 25.2 0.0 3.2e-05 23.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|91774341|ref|YP_567033.1| - 0.0032 17.3 0.0 0.013 15.4 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|91774341|ref|YP_567033.1| - 0.011 16.1 0.1 0.085 13.2 0.0 2.4 2 0 0 2 2 2 0 AAA ATPase domain DUF4072 PF13284.6 gi|91774341|ref|YP_567033.1| - 0.058 13.9 0.1 0.18 12.3 0.1 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4072) Sigma54_activat PF00158.26 gi|91774341|ref|YP_567033.1| - 0.17 11.6 0.1 1.6 8.4 0.1 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain SpoU_methylase PF00588.19 gi|91774342|ref|YP_567034.1| - 3.2e-32 111.7 0.0 4.3e-32 111.2 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family Rubrerythrin PF02915.17 gi|91774343|ref|YP_567035.1| - 6.6e-11 42.8 7.4 2.3e-09 37.8 7.4 2.0 1 1 0 1 1 1 1 Rubrerythrin Phenol_Hydrox PF02332.18 gi|91774343|ref|YP_567035.1| - 0.00088 18.9 0.5 0.35 10.4 0.1 2.1 2 0 0 2 2 2 2 Methane/Phenol/Toluene Hydroxylase AAA_assoc_C PF09821.9 gi|91774343|ref|YP_567035.1| - 0.0036 17.8 0.3 0.0086 16.6 0.3 1.6 1 1 1 2 2 2 1 C-terminal AAA-associated domain Ferritin PF00210.24 gi|91774343|ref|YP_567035.1| - 0.007 16.3 6.7 0.45 10.5 6.7 2.1 1 1 0 1 1 1 1 Ferritin-like domain FA_desaturase_2 PF03405.14 gi|91774343|ref|YP_567035.1| - 0.042 12.7 1.6 1.7 7.4 0.1 2.0 1 1 1 2 2 2 0 Fatty acid desaturase NIR_SIR PF01077.22 gi|91774344|ref|YP_567036.1| - 4.2e-25 88.1 0.0 5.3e-25 87.8 0.0 1.1 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|91774344|ref|YP_567036.1| - 1.3e-13 50.6 0.0 2.1e-13 49.9 0.0 1.4 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Carla_C4 PF01623.17 gi|91774344|ref|YP_567036.1| - 0.036 14.0 0.0 0.058 13.4 0.0 1.5 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein Nitrate_red_gam PF02665.14 gi|91774345|ref|YP_567037.1| - 0.0069 16.0 4.9 0.0069 16.0 4.9 3.2 1 1 1 3 3 3 2 Nitrate reductase gamma subunit DUF5367 PF17329.2 gi|91774345|ref|YP_567037.1| - 0.087 13.0 0.6 0.087 13.0 0.6 3.4 4 0 0 4 4 4 0 Family of unknown function (DUF5367) CCG PF02754.16 gi|91774346|ref|YP_567038.1| - 4.7e-28 97.2 7.8 2.4e-15 56.5 0.0 2.7 3 0 0 3 3 3 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|91774346|ref|YP_567038.1| - 3.1e-12 46.8 2.3 3.1e-12 46.8 2.3 3.0 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|91774346|ref|YP_567038.1| - 9.9e-07 29.2 3.3 9.9e-07 29.2 3.3 3.0 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|91774346|ref|YP_567038.1| - 7.7e-06 25.9 16.5 9.9e-06 25.6 11.4 3.4 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|91774346|ref|YP_567038.1| - 1.6e-05 25.4 9.8 1.6e-05 25.4 9.8 2.7 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|91774346|ref|YP_567038.1| - 5.8e-05 23.9 6.3 5.8e-05 23.9 6.3 2.5 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|91774346|ref|YP_567038.1| - 0.00013 22.0 8.8 0.096 12.8 0.8 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|91774346|ref|YP_567038.1| - 0.00021 21.4 22.7 0.00045 20.3 12.1 3.5 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|91774346|ref|YP_567038.1| - 0.00071 19.8 5.3 0.47 10.7 0.5 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|91774346|ref|YP_567038.1| - 0.003 17.3 21.3 0.011 15.6 3.4 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|91774346|ref|YP_567038.1| - 0.0069 16.4 20.3 0.023 14.7 2.7 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|91774346|ref|YP_567038.1| - 0.0099 15.9 21.0 0.01 15.9 2.0 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|91774346|ref|YP_567038.1| - 0.013 16.2 2.6 3.7 8.3 0.1 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain Desulfoferrod_N PF06397.12 gi|91774346|ref|YP_567038.1| - 0.021 14.5 2.0 0.021 14.5 2.0 3.1 3 0 0 3 3 3 0 Desulfoferrodoxin, N-terminal domain Fer4_22 PF17179.4 gi|91774346|ref|YP_567038.1| - 0.033 15.0 12.4 0.4 11.5 0.5 3.5 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|91774346|ref|YP_567038.1| - 0.068 14.1 3.5 0.068 14.1 3.5 3.5 3 0 0 3 3 2 0 4Fe-4S binding domain DUF116 PF01976.17 gi|91774347|ref|YP_567039.1| - 3e-43 147.0 3.6 3.6e-43 146.7 3.6 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 ABC2_membrane_3 PF12698.7 gi|91774347|ref|YP_567039.1| - 1.9 7.5 8.1 2.7 7.0 8.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF116 PF01976.17 gi|91774348|ref|YP_567040.1| - 4e-44 149.8 0.0 4.9e-44 149.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF116 DUF1686 PF07937.11 gi|91774348|ref|YP_567040.1| - 0.13 12.1 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1686) DUF772 PF05598.11 gi|91774351|ref|YP_567043.1| - 1.1e-21 76.6 0.0 2.1e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|91774351|ref|YP_567043.1| - 2e-16 60.3 2.2 5.8e-16 58.8 2.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.6 gi|91774351|ref|YP_567043.1| - 0.0037 17.5 0.1 0.0091 16.2 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|91774351|ref|YP_567043.1| - 0.02 14.9 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|91774351|ref|YP_567043.1| - 0.035 13.8 0.1 0.071 12.8 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease DASH_Dad3 PF08656.10 gi|91774352|ref|YP_567044.1| - 0.0005 20.1 0.0 0.00063 19.8 0.0 1.2 1 0 0 1 1 1 1 DASH complex subunit Dad3 ComA PF02679.15 gi|91774352|ref|YP_567044.1| - 0.0017 17.9 0.0 0.0018 17.8 0.0 1.1 1 0 0 1 1 1 1 (2R)-phospho-3-sulfolactate synthase (ComA) Tht1 PF04163.12 gi|91774352|ref|YP_567044.1| - 0.015 14.1 0.1 0.016 14.0 0.1 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein Helo_like_N PF17111.5 gi|91774352|ref|YP_567044.1| - 0.041 13.2 0.1 0.046 13.1 0.1 1.1 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins ArsA_HSP20 PF17886.1 gi|91774353|ref|YP_567045.1| - 2e-05 24.1 0.0 4.6e-05 22.9 0.0 1.7 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|91774353|ref|YP_567045.1| - 0.0001 22.4 0.2 0.001 19.2 0.2 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family RuBisCO_large PF00016.20 gi|91774353|ref|YP_567045.1| - 0.041 13.1 0.0 0.05 12.8 0.0 1.2 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, catalytic domain CS PF04969.16 gi|91774353|ref|YP_567045.1| - 0.074 14.1 0.0 0.12 13.5 0.0 1.2 1 0 0 1 1 1 0 CS domain OB_aCoA_assoc PF01796.17 gi|91774353|ref|YP_567045.1| - 0.11 12.5 0.2 6.9 6.7 0.0 2.3 2 0 0 2 2 2 0 DUF35 OB-fold domain, acyl-CoA-associated Response_reg PF00072.24 gi|91774354|ref|YP_567046.1| - 5.2e-27 94.2 0.1 5.8e-27 94.1 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain PLDc PF00614.22 gi|91774354|ref|YP_567046.1| - 0.059 13.6 0.0 0.099 12.9 0.0 1.4 1 0 0 1 1 1 0 Phospholipase D Active site motif Methyltransf_15 PF09445.10 gi|91774355|ref|YP_567047.1| - 9.1e-13 48.1 0.1 1.9e-12 47.1 0.1 1.7 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_31 PF13847.6 gi|91774355|ref|YP_567047.1| - 2e-08 34.2 0.1 4.3e-08 33.1 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|91774355|ref|YP_567047.1| - 5e-07 30.3 0.0 1.4e-06 28.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|91774355|ref|YP_567047.1| - 5.3e-07 29.3 0.0 1.1e-06 28.3 0.0 1.5 1 0 0 1 1 1 1 Putative methyltransferase tRNA_U5-meth_tr PF05958.11 gi|91774355|ref|YP_567047.1| - 5.8e-05 22.2 0.4 0.00029 19.9 0.1 2.2 2 1 1 3 3 3 1 tRNA (Uracil-5-)-methyltransferase MTS PF05175.14 gi|91774355|ref|YP_567047.1| - 0.0002 20.9 0.0 0.00038 20.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|91774355|ref|YP_567047.1| - 0.00037 21.1 0.0 0.00094 19.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|91774355|ref|YP_567047.1| - 0.0004 20.4 0.0 0.00091 19.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|91774355|ref|YP_567047.1| - 0.004 16.5 0.2 0.013 14.8 0.0 1.8 2 0 0 2 2 2 1 rRNA small subunit methyltransferase G CmcI PF04989.12 gi|91774355|ref|YP_567047.1| - 0.0074 16.0 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Cephalosporin hydroxylase RrnaAD PF00398.20 gi|91774355|ref|YP_567047.1| - 0.009 15.1 0.0 0.022 13.8 0.0 1.7 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase FtsJ PF01728.19 gi|91774355|ref|YP_567047.1| - 0.023 14.8 0.0 0.032 14.3 0.0 1.4 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltr_RsmB-F PF01189.17 gi|91774355|ref|YP_567047.1| - 0.031 13.9 0.0 0.068 12.8 0.0 1.5 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Met_10 PF02475.16 gi|91774355|ref|YP_567047.1| - 0.04 13.7 0.0 0.087 12.6 0.0 1.5 1 0 0 1 1 1 0 Met-10+ like-protein Ubie_methyltran PF01209.18 gi|91774355|ref|YP_567047.1| - 0.097 12.0 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|91774355|ref|YP_567047.1| - 0.15 11.7 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanococcoides_burtonii_DSM_6242_uid58023/NC_007955.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanococcoides_burtonii_DSM_6242_uid58023/NC_007955.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanococcoides_burtonii_DSM_6242_uid58023/NC_007955.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanococcoides_burtonii_DSM_6242_uid58023/NC_007955.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 15:57:09 2019 # [ok]